R615_RS16405 d82860471360aee2b14fa2d50a620c3a 255 PANTHER PTHR24220 16 255 2.7E-125 T 22-04-2016 R615_RS16405 d82860471360aee2b14fa2d50a620c3a 255 Gene3D G3DSA:3.40.50.300 13 252 2.7E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16405 d82860471360aee2b14fa2d50a620c3a 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 254 9.4E-8 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal R615_RS16405 d82860471360aee2b14fa2d50a620c3a 255 SUPERFAMILY SSF52540 14 253 4.67E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16405 d82860471360aee2b14fa2d50a620c3a 255 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 14 255 1.1E-114 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD R615_RS16405 d82860471360aee2b14fa2d50a620c3a 255 Pfam PF00005 ABC transporter 30 184 6.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS16405 d82860471360aee2b14fa2d50a620c3a 255 PANTHER PTHR24220:SF366 16 255 2.7E-125 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD R615_RS09500 6fb1f793e429125d4c0ec7c7328defef 456 PIRSF PIRSF006603 3 454 1.9E-53 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS09500 6fb1f793e429125d4c0ec7c7328defef 456 PANTHER PTHR11206:SF153 6 452 1.5E-148 T 22-04-2016 R615_RS09500 6fb1f793e429125d4c0ec7c7328defef 456 Pfam PF01554 MatE 243 404 1.4E-28 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS09500 6fb1f793e429125d4c0ec7c7328defef 456 Pfam PF01554 MatE 17 176 1.2E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS09500 6fb1f793e429125d4c0ec7c7328defef 456 PANTHER PTHR11206 6 452 1.5E-148 T 22-04-2016 R615_RS09500 6fb1f793e429125d4c0ec7c7328defef 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 419 4.8E-85 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS05240 93481eee2190741d06358fd4b8d64377 388 Pfam PF00202 Aminotransferase class-III 10 384 1.3E-114 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS05240 93481eee2190741d06358fd4b8d64377 388 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS05240 93481eee2190741d06358fd4b8d64377 388 Gene3D G3DSA:3.40.640.10 47 277 4.4E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS05240 93481eee2190741d06358fd4b8d64377 388 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 4 385 2.4E-142 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 R615_RS05240 93481eee2190741d06358fd4b8d64377 388 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 1 385 44.333 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 R615_RS05240 93481eee2190741d06358fd4b8d64377 388 Gene3D G3DSA:3.90.1150.10 278 387 2.3E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS05240 93481eee2190741d06358fd4b8d64377 388 SUPERFAMILY SSF53383 4 385 4.17E-123 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS05240 93481eee2190741d06358fd4b8d64377 388 PANTHER PTHR11986 8 388 8.8E-158 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS05240 93481eee2190741d06358fd4b8d64377 388 PANTHER PTHR11986:SF79 8 388 8.8E-158 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 1.5E-38 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.5E-38 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 1.5E-38 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 1.5E-38 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 1.5E-38 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PANTHER PTHR22912 1 465 8.8E-241 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 3.0E-77 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.0E-77 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 3.0E-77 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 3.0E-77 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 3.0E-77 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 3.0E-77 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 3.0E-77 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 3.0E-77 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 3.0E-77 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 SUPERFAMILY SSF51905 1 344 1.05E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 1.6E-67 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PIRSF PIRSF000350 1 472 2.6E-84 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 462 2.1E-39 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 Gene3D G3DSA:3.30.390.30 341 471 5.1E-51 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 Gene3D G3DSA:3.50.50.60 148 340 3.7E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 471 1.3E-159 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 PANTHER PTHR22912:SF131 1 465 8.8E-241 T 22-04-2016 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 SUPERFAMILY SSF55424 349 472 1.65E-42 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 R615_RS09780 ff4ff40a7e39c28c25bd78da16f6d325 479 Gene3D G3DSA:3.50.50.60 2 147 3.2E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14890 de0adc0c32ee4d6fa095e7156f524c8a 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 7.0E-15 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 R615_RS14890 de0adc0c32ee4d6fa095e7156f524c8a 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 380 406 7.0E-15 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 R615_RS14890 de0adc0c32ee4d6fa095e7156f524c8a 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 235 259 7.0E-15 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 R615_RS14890 de0adc0c32ee4d6fa095e7156f524c8a 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 7.0E-15 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 R615_RS14890 de0adc0c32ee4d6fa095e7156f524c8a 502 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 7.0E-15 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 R615_RS14890 de0adc0c32ee4d6fa095e7156f524c8a 502 PANTHER PTHR22773 1 486 1.7E-123 T 22-04-2016 R615_RS14890 de0adc0c32ee4d6fa095e7156f524c8a 502 PANTHER PTHR22773:SF49 1 486 1.7E-123 T 22-04-2016 R615_RS14890 de0adc0c32ee4d6fa095e7156f524c8a 502 Pfam PF00361 Proton-conducting membrane transporter 128 414 1.1E-37 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 R615_RS02595 f8d78c097488e315aa65592a4c265777 237 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 6 234 8.2E-61 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein R615_RS02595 f8d78c097488e315aa65592a4c265777 237 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 237 51.53 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein R615_RS02595 f8d78c097488e315aa65592a4c265777 237 Pfam PF03749 Sugar fermentation stimulation protein 13 228 1.2E-71 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein R615_RS02595 f8d78c097488e315aa65592a4c265777 237 PANTHER PTHR30545:SF2 1 237 2.2E-72 T 22-04-2016 R615_RS02595 f8d78c097488e315aa65592a4c265777 237 PANTHER PTHR30545 1 237 2.2E-72 T 22-04-2016 R615_RS03180 2e640b0bcab881680eba3af8298912f6 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03180 2e640b0bcab881680eba3af8298912f6 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 7.2E-41 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 R615_RS03180 2e640b0bcab881680eba3af8298912f6 103 SUPERFAMILY SSF141091 1 101 1.06E-39 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 R615_RS03180 2e640b0bcab881680eba3af8298912f6 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 8.8E-44 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03180 2e640b0bcab881680eba3af8298912f6 103 PANTHER PTHR21349 1 103 8.5E-48 T 22-04-2016 R615_RS03180 2e640b0bcab881680eba3af8298912f6 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.644 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS11310 049e8c2543bb75d9db910a1100feb94b 423 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 82 412 7.4E-25 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 R615_RS11310 049e8c2543bb75d9db910a1100feb94b 423 Gene3D G3DSA:3.20.20.190 79 414 1.4E-59 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 R615_RS11310 049e8c2543bb75d9db910a1100feb94b 423 PANTHER PTHR23344 390 423 3.6E-65 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 R615_RS11310 049e8c2543bb75d9db910a1100feb94b 423 PANTHER PTHR23344 78 355 3.6E-65 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 R615_RS11310 049e8c2543bb75d9db910a1100feb94b 423 SUPERFAMILY SSF51695 78 415 4.45E-64 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 R615_RS11310 049e8c2543bb75d9db910a1100feb94b 423 PANTHER PTHR23344:SF7 390 423 3.6E-65 T 22-04-2016 R615_RS11310 049e8c2543bb75d9db910a1100feb94b 423 PANTHER PTHR23344:SF7 78 355 3.6E-65 T 22-04-2016 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 SMART SM00271 4 62 6.9E-28 T 22-04-2016 IPR001623 DnaJ domain R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 PANTHER PTHR24078 1 350 2.0E-162 T 22-04-2016 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 Pfam PF01556 DnaJ C terminal domain 121 333 5.1E-45 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 SUPERFAMILY SSF49493 114 152 4.19E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 374 42.111 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 Gene3D G3DSA:1.10.287.110 1 103 1.4E-35 T 22-04-2016 IPR001623 DnaJ domain R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 SUPERFAMILY SSF57938 134 210 6.28E-23 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 349 4.8E-138 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 Pfam PF00226 DnaJ domain 5 67 1.6E-25 T 22-04-2016 IPR001623 DnaJ domain R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 Pfam PF00684 DnaJ central domain 147 207 2.4E-14 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 Gene3D G3DSA:2.60.260.20 256 333 3.1E-23 T 22-04-2016 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 Gene3D G3DSA:2.10.230.10 141 210 3.3E-24 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 SUPERFAMILY SSF49493 259 344 7.46E-23 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 PRINTS PR00625 DnaJ domain signature 42 62 4.1E-31 T 22-04-2016 IPR001623 DnaJ domain R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 PRINTS PR00625 DnaJ domain signature 7 25 4.1E-31 T 22-04-2016 IPR001623 DnaJ domain R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 PRINTS PR00625 DnaJ domain signature 62 81 4.1E-31 T 22-04-2016 IPR001623 DnaJ domain R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 PRINTS PR00625 DnaJ domain signature 25 40 4.1E-31 T 22-04-2016 IPR001623 DnaJ domain R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 PANTHER PTHR24078:SF231 1 350 2.0E-162 T 22-04-2016 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 SUPERFAMILY SSF49493 213 267 4.19E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 SUPERFAMILY SSF46565 1 110 1.31E-35 T 22-04-2016 IPR001623 DnaJ domain R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 Gene3D G3DSA:2.60.260.20 109 140 2.4E-23 T 22-04-2016 R615_RS03840 7d9400f24effc520c35b92e740292cdc 378 Gene3D G3DSA:2.60.260.20 211 254 2.4E-23 T 22-04-2016 R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 PANTHER PTHR11615 3 734 1.1E-208 T 22-04-2016 R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 SMART SM00926 5 73 8.1E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 SUPERFAMILY SSF53706 6 585 5.63E-181 T 22-04-2016 R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 Gene3D G3DSA:3.40.50.740 329 582 2.5E-56 T 22-04-2016 R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 Pfam PF01568 Molydopterin dinucleotide binding domain 598 709 7.8E-29 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 Pfam PF04324 BFD-like [2Fe-2S] binding domain 845 893 2.7E-9 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 SUPERFAMILY SSF50692 592 739 5.42E-37 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 Pfam PF00384 Molybdopterin oxidoreductase 76 497 3.6E-80 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 73 1.6E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 Gene3D G3DSA:2.20.25.90 3 74 2.7E-18 T 22-04-2016 R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 Gene3D G3DSA:2.40.40.20 597 716 1.6E-38 T 22-04-2016 R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 PANTHER PTHR11615:SF119 3 734 1.1E-208 T 22-04-2016 R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 Gene3D G3DSA:3.40.228.10 153 328 2.1E-53 T 22-04-2016 R615_RS10035 186516aa9d46d4cb2d5ead2d688c75ef 908 Gene3D G3DSA:3.40.50.740 76 152 3.2E-20 T 22-04-2016 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 Gene3D G3DSA:3.40.228.10 169 334 1.1E-38 T 22-04-2016 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 SUPERFAMILY SSF53706 3 536 2.09E-114 T 22-04-2016 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 Pfam PF00384 Molybdopterin oxidoreductase 62 485 2.2E-33 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 SUPERFAMILY SSF50692 583 708 1.36E-28 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 Gene3D G3DSA:3.40.50.740 367 488 1.3E-46 T 22-04-2016 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 Gene3D G3DSA:3.40.50.740 64 120 1.3E-46 T 22-04-2016 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 Gene3D G3DSA:3.40.50.740 155 168 1.3E-46 T 22-04-2016 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 PANTHER PTHR11615 4 709 1.8E-153 T 22-04-2016 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 Pfam PF01568 Molydopterin dinucleotide binding domain 584 701 1.7E-21 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 Gene3D G3DSA:2.40.40.20 580 708 5.3E-26 T 22-04-2016 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 53 3.8E-8 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 PANTHER PTHR11615:SF125 4 709 1.8E-153 T 22-04-2016 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 SMART SM00926 3 59 4.7E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 R615_RS07795 5fbcebf2a53faf8d214b08699227b93d 709 Gene3D G3DSA:2.20.25.90 3 63 6.7E-15 T 22-04-2016 R615_RS02615 38ccea07212a3d7115570249e8114aff 110 SUPERFAMILY SSF50022 3 103 1.17E-26 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 R615_RS02615 38ccea07212a3d7115570249e8114aff 110 Pfam PF00355 Rieske [2Fe-2S] domain 3 87 7.5E-15 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 R615_RS02615 38ccea07212a3d7115570249e8114aff 110 PANTHER PTHR40261:SF2 1 104 7.0E-34 T 22-04-2016 R615_RS02615 38ccea07212a3d7115570249e8114aff 110 PANTHER PTHR40261 1 104 7.0E-34 T 22-04-2016 R615_RS02615 38ccea07212a3d7115570249e8114aff 110 Gene3D G3DSA:2.102.10.10 3 104 4.8E-26 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 Gene3D G3DSA:1.20.150.20 384 512 3.4E-46 T 22-04-2016 R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 SUPERFAMILY SSF52540 97 382 9.23E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 93 2.6E-14 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 513 9.0E-245 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 PANTHER PTHR15184:SF3 1 497 2.9E-285 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 1.0E-42 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 PANTHER PTHR15184 1 497 2.9E-285 T 22-04-2016 R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 Gene3D G3DSA:3.40.50.300 95 383 1.4E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 SUPERFAMILY SSF50615 11 95 5.1E-28 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 Gene3D G3DSA:2.40.30.20 3 94 8.0E-33 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 2.0E-71 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 SUPERFAMILY SSF47917 384 512 2.15E-43 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16960 adf47491bdf8f7456501c10f6442e4fc 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 49.288 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS05810 b33f24d6bb9067ba5ebf24c5e133de2a 264 PANTHER PTHR10953:SF159 7 161 1.5E-121 T 22-04-2016 R615_RS05810 b33f24d6bb9067ba5ebf24c5e133de2a 264 PANTHER PTHR10953 194 260 1.5E-121 T 22-04-2016 R615_RS05810 b33f24d6bb9067ba5ebf24c5e133de2a 264 Pfam PF00899 ThiF family 16 256 6.7E-40 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 R615_RS05810 b33f24d6bb9067ba5ebf24c5e133de2a 264 Gene3D G3DSA:3.40.50.720 3 257 4.8E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS05810 b33f24d6bb9067ba5ebf24c5e133de2a 264 SUPERFAMILY SSF69572 3 257 1.22E-66 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 R615_RS05810 b33f24d6bb9067ba5ebf24c5e133de2a 264 PANTHER PTHR10953:SF159 194 260 1.5E-121 T 22-04-2016 R615_RS05810 b33f24d6bb9067ba5ebf24c5e133de2a 264 PANTHER PTHR10953 7 161 1.5E-121 T 22-04-2016 R615_RS14940 c09e78b33434b9968ee62aa68414836c 699 PRINTS PR00811 Bacterial general secretion pathway protein D signature 680 694 4.7E-19 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS14940 c09e78b33434b9968ee62aa68414836c 699 PRINTS PR00811 Bacterial general secretion pathway protein D signature 437 447 4.7E-19 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS14940 c09e78b33434b9968ee62aa68414836c 699 PRINTS PR00811 Bacterial general secretion pathway protein D signature 657 675 4.7E-19 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS14940 c09e78b33434b9968ee62aa68414836c 699 PRINTS PR00811 Bacterial general secretion pathway protein D signature 534 558 4.7E-19 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS14940 c09e78b33434b9968ee62aa68414836c 699 Pfam PF11741 AMIN domain 41 127 2.4E-9 T 22-04-2016 IPR021731 AMIN domain R615_RS14940 c09e78b33434b9968ee62aa68414836c 699 Pfam PF07660 Secretin and TonB N terminus short domain 301 347 4.3E-8 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 R615_RS14940 c09e78b33434b9968ee62aa68414836c 699 PANTHER PTHR30604 17 699 1.5E-108 T 22-04-2016 R615_RS14940 c09e78b33434b9968ee62aa68414836c 699 Pfam PF03958 Bacterial type II/III secretion system short domain 375 437 1.4E-10 T 22-04-2016 IPR005644 NolW-like R615_RS14940 c09e78b33434b9968ee62aa68414836c 699 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 275 693 4.5E-155 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 R615_RS14940 c09e78b33434b9968ee62aa68414836c 699 Pfam PF00263 Bacterial type II and III secretion system protein 538 693 1.5E-48 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 R615_RS14940 c09e78b33434b9968ee62aa68414836c 699 SMART SM00965 300 348 2.0E-8 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 R615_RS11085 4fa9467c2b70d35ccd09571e6057d8c7 232 Pfam PF13276 HTH-like domain 26 81 4.5E-18 T 22-04-2016 IPR025948 HTH-like domain R615_RS11085 4fa9467c2b70d35ccd09571e6057d8c7 232 Gene3D G3DSA:3.30.420.10 106 225 2.8E-28 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS11085 4fa9467c2b70d35ccd09571e6057d8c7 232 SUPERFAMILY SSF53098 105 228 1.31E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS11085 4fa9467c2b70d35ccd09571e6057d8c7 232 Pfam PF00665 Integrase core domain 108 221 5.9E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 R615_RS11085 4fa9467c2b70d35ccd09571e6057d8c7 232 PANTHER PTHR32552 1 223 1.0E-43 T 22-04-2016 R615_RS17175 3b2aa1ba944acdc9f3913c693cad1b69 535 SMART SM00052 269 514 4.1E-84 T 22-04-2016 IPR001633 EAL domain R615_RS17175 3b2aa1ba944acdc9f3913c693cad1b69 535 PANTHER PTHR33121 275 520 1.6E-64 T 22-04-2016 R615_RS17175 3b2aa1ba944acdc9f3913c693cad1b69 535 SUPERFAMILY SSF141868 275 519 3.27E-75 T 22-04-2016 IPR001633 EAL domain R615_RS17175 3b2aa1ba944acdc9f3913c693cad1b69 535 Gene3D G3DSA:3.20.20.450 275 517 3.8E-80 T 22-04-2016 IPR001633 EAL domain R615_RS17175 3b2aa1ba944acdc9f3913c693cad1b69 535 Pfam PF00563 EAL domain 276 509 5.7E-64 T 22-04-2016 IPR001633 EAL domain R615_RS17175 3b2aa1ba944acdc9f3913c693cad1b69 535 PANTHER PTHR33121:SF13 275 520 1.6E-64 T 22-04-2016 R615_RS16515 8ccf1f2822e2b75cab8bfcfd2eeae41b 269 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 262 19.16 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 R615_RS16515 8ccf1f2822e2b75cab8bfcfd2eeae41b 269 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 138 150 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 R615_RS16515 8ccf1f2822e2b75cab8bfcfd2eeae41b 269 PANTHER PTHR30589 1 260 7.6E-97 T 22-04-2016 R615_RS16515 8ccf1f2822e2b75cab8bfcfd2eeae41b 269 PANTHER PTHR30589:SF0 1 260 7.6E-97 T 22-04-2016 R615_RS16515 8ccf1f2822e2b75cab8bfcfd2eeae41b 269 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 263 3.0E-78 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 R615_RS16515 8ccf1f2822e2b75cab8bfcfd2eeae41b 269 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 256 6.3E-76 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 R615_RS14960 87d40735d811bd2f6e98d9b897ab7b7c 365 PANTHER PTHR32432 12 364 2.5E-88 T 22-04-2016 R615_RS14960 87d40735d811bd2f6e98d9b897ab7b7c 365 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 22 364 1.0E-123 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM R615_RS14960 87d40735d811bd2f6e98d9b897ab7b7c 365 SUPERFAMILY SSF53067 205 363 1.88E-26 T 22-04-2016 R615_RS14960 87d40735d811bd2f6e98d9b897ab7b7c 365 Gene3D G3DSA:3.30.420.40 207 326 1.4E-26 T 22-04-2016 R615_RS14960 87d40735d811bd2f6e98d9b897ab7b7c 365 SMART SM00842 24 191 3.2E-4 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 R615_RS14960 87d40735d811bd2f6e98d9b897ab7b7c 365 Gene3D G3DSA:3.30.420.40 19 116 4.6E-8 T 22-04-2016 R615_RS14960 87d40735d811bd2f6e98d9b897ab7b7c 365 PANTHER PTHR32432:SF3 12 364 2.5E-88 T 22-04-2016 R615_RS14960 87d40735d811bd2f6e98d9b897ab7b7c 365 PIRSF PIRSF019169 12 365 1.3E-121 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM R615_RS14960 87d40735d811bd2f6e98d9b897ab7b7c 365 Pfam PF11104 Type IV pilus assembly protein PilM; 26 364 3.9E-129 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM R615_RS14960 87d40735d811bd2f6e98d9b897ab7b7c 365 SUPERFAMILY SSF53067 24 187 5.64E-12 T 22-04-2016 R615_RS17365 4e8b5362dccc8cd4a616456c7535b578 329 Pfam PF07859 alpha/beta hydrolase fold 61 151 1.4E-7 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 R615_RS17365 4e8b5362dccc8cd4a616456c7535b578 329 SUPERFAMILY SSF53474 31 183 5.3E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS17365 4e8b5362dccc8cd4a616456c7535b578 329 Gene3D G3DSA:3.40.50.1820 32 239 8.8E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Pfam PF01627 Hpt domain 662 751 2.9E-14 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Pfam PF01627 Hpt domain 1311 1380 4.2E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Pfam PF01627 Hpt domain 1162 1255 1.6E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Pfam PF01627 Hpt domain 828 913 5.7E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Pfam PF01627 Hpt domain 8 96 4.4E-8 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SUPERFAMILY SSF50341 1823 1961 4.84E-21 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SMART SM00073 1159 1256 4.6E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SMART SM00073 1309 1410 1.3E-4 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SMART SM00073 825 922 0.0046 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SMART SM00073 660 757 1.2E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Gene3D G3DSA:1.10.287.560 1503 1558 2.4E-8 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 PANTHER PTHR22617:SF28 1309 1550 2.0E-185 T 22-04-2016 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 PANTHER PTHR22617:SF28 1616 1977 2.0E-185 T 22-04-2016 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 PANTHER PTHR22617:SF28 46 158 2.0E-185 T 22-04-2016 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SUPERFAMILY SSF47226 7 128 9.29E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Pfam PF00072 Response regulator receiver domain 1993 2104 2.6E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SUPERFAMILY SSF47226 659 770 7.85E-25 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SMART SM00448 1991 2104 2.4E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Gene3D G3DSA:2.30.30.40 1916 1961 3.3E-21 T 22-04-2016 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Gene3D G3DSA:2.30.30.40 1824 1845 3.3E-21 T 22-04-2016 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SUPERFAMILY SSF47226 965 1080 2.24E-8 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Gene3D G3DSA:3.30.565.10 1639 1822 7.7E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SUPERFAMILY SSF47226 426 535 5.1E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SUPERFAMILY SSF52172 1991 2109 9.82E-39 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SUPERFAMILY SSF47226 1160 1278 6.93E-26 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SMART SM01231 1501 1638 4.7E-13 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SMART SM00387 1683 1824 1.2E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1503 1638 1.7E-7 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Gene3D G3DSA:1.20.120.160 966 1082 1.8E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Gene3D G3DSA:1.20.120.160 823 965 1.1E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Gene3D G3DSA:1.20.120.160 1306 1417 2.1E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Gene3D G3DSA:1.20.120.160 1157 1292 4.1E-32 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Gene3D G3DSA:1.20.120.160 8 138 4.9E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Gene3D G3DSA:1.20.120.160 659 786 5.7E-27 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1808 1821 2.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1728 1742 2.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1784 1802 2.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1687 1823 4.1E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Pfam PF01584 CheW-like domain 1829 1963 2.1E-16 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SUPERFAMILY SSF47226 825 923 1.01E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 Gene3D G3DSA:3.40.50.2300 1986 2110 2.4E-39 T 22-04-2016 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 PANTHER PTHR22617 1309 1550 2.0E-185 T 22-04-2016 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 PANTHER PTHR22617 1616 1977 2.0E-185 T 22-04-2016 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 PANTHER PTHR22617 46 158 2.0E-185 T 22-04-2016 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SUPERFAMILY SSF47226 1309 1412 3.79E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SMART SM00260 1816 1961 1.9E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS01245 24a4067929b7ec27dd819e385b81ee31 2113 SUPERFAMILY SSF55874 1640 1821 2.75E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS10875 be83cff828d5107a665ee86df197ee65 489 Gene3D G3DSA:3.40.220.10 1 155 6.9E-34 T 22-04-2016 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 PRINTS PR00481 Cytosol aminopeptidase signature 254 271 1.4E-50 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 PRINTS PR00481 Cytosol aminopeptidase signature 313 334 1.4E-50 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 PRINTS PR00481 Cytosol aminopeptidase signature 276 297 1.4E-50 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 PRINTS PR00481 Cytosol aminopeptidase signature 364 379 1.4E-50 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 PRINTS PR00481 Cytosol aminopeptidase signature 335 355 1.4E-50 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 SUPERFAMILY SSF53187 174 486 2.64E-113 T 22-04-2016 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 PANTHER PTHR11963:SF13 1 489 3.4E-175 T 22-04-2016 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 SUPERFAMILY SSF52949 1 174 8.24E-29 T 22-04-2016 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 142 8.9E-17 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 177 480 6.0E-113 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 PANTHER PTHR11963 1 489 3.4E-175 T 22-04-2016 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 489 34.397 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 Gene3D G3DSA:3.40.630.10 164 486 2.4E-127 T 22-04-2016 R615_RS10875 be83cff828d5107a665ee86df197ee65 489 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 339 346 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 PANTHER PTHR11405:SF1 1 290 1.4E-135 T 22-04-2016 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 PANTHER PTHR11405 1 290 1.4E-135 T 22-04-2016 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 40 47 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 135 5.8E-47 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 122 133 5.1E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 243 252 5.1E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 255 278 5.1E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 40 59 5.1E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 Gene3D G3DSA:3.40.50.1370 2 131 1.2E-51 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 290 4.1E-113 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 Gene3D G3DSA:3.40.50.1370 132 277 8.3E-58 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 141 288 3.5E-50 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 SUPERFAMILY SSF53671 2 290 1.7E-101 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 PRINTS PR00102 Ornithine carbamoyltransferase signature 269 280 4.0E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 PRINTS PR00102 Ornithine carbamoyltransferase signature 207 217 4.0E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 PRINTS PR00102 Ornithine carbamoyltransferase signature 111 125 4.0E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 PRINTS PR00102 Ornithine carbamoyltransferase signature 71 84 4.0E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 PRINTS PR00102 Ornithine carbamoyltransferase signature 38 52 4.0E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 R615_RS05235 d5685c63100c3b1994e01f0b91325fae 294 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 291 77.354 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 Gene3D G3DSA:3.40.50.300 311 518 9.8E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 SMART SM00382 18 230 5.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 SMART SM00382 336 504 8.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 PANTHER PTHR19211:SF38 1 520 0.0 T 22-04-2016 R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 SUPERFAMILY SSF52540 3 230 2.35E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 SUPERFAMILY SSF52540 294 515 6.54E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 Pfam PF00005 ABC transporter 329 459 2.6E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 Pfam PF00005 ABC transporter 10 176 1.0E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 PANTHER PTHR19211 1 520 0.0 T 22-04-2016 R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 Gene3D G3DSA:3.40.50.300 124 270 5.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 Gene3D G3DSA:3.40.50.300 2 92 5.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03410 6d7e679bec75ca38198e88ff91e96505 520 Pfam PF12848 ABC transporter 216 292 2.0E-19 T 22-04-2016 IPR032781 ABC-transporter extension domain R615_RS06175 520b53a79568d81f5582a6fee96d6f42 374 PANTHER PTHR12526 1 368 2.2E-87 T 22-04-2016 R615_RS06175 520b53a79568d81f5582a6fee96d6f42 374 Pfam PF13439 Glycosyltransferase Family 4 26 163 4.8E-9 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain R615_RS06175 520b53a79568d81f5582a6fee96d6f42 374 Gene3D G3DSA:3.40.50.2000 194 344 5.5E-8 T 22-04-2016 R615_RS06175 520b53a79568d81f5582a6fee96d6f42 374 Pfam PF00534 Glycosyl transferases group 1 187 345 3.5E-21 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 R615_RS06175 520b53a79568d81f5582a6fee96d6f42 374 SUPERFAMILY SSF53756 24 370 2.98E-45 T 22-04-2016 R615_RS06175 520b53a79568d81f5582a6fee96d6f42 374 PANTHER PTHR12526:SF410 1 368 2.2E-87 T 22-04-2016 R615_RS06005 409cc337bed80e055f4ebb84722f8374 99 SUPERFAMILY SSF54909 1 97 5.9E-30 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel R615_RS06005 409cc337bed80e055f4ebb84722f8374 99 PANTHER PTHR33606 1 98 3.5E-31 T 22-04-2016 R615_RS06005 409cc337bed80e055f4ebb84722f8374 99 Pfam PF03795 YCII-related domain 1 95 1.9E-28 T 22-04-2016 IPR005545 YCII-related R615_RS06005 409cc337bed80e055f4ebb84722f8374 99 Gene3D G3DSA:3.30.70.1060 1 97 3.3E-34 T 22-04-2016 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 PANTHER PTHR24423:SF554 77 418 7.7E-99 T 22-04-2016 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 SUPERFAMILY SSF47384 184 262 6.87E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 Pfam PF00512 His Kinase A (phospho-acceptor) domain 198 262 7.0E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 Gene3D G3DSA:3.30.565.10 249 414 8.4E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 93 412 1.2E-103 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 SMART SM00388 198 263 4.4E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 307 414 5.3E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 SUPERFAMILY SSF55874 252 414 1.88E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 SUPERFAMILY SSF55785 86 153 7.68E-7 T 22-04-2016 IPR000014 PAS domain R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 Gene3D G3DSA:3.30.450.20 93 189 4.4E-8 T 22-04-2016 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 Gene3D G3DSA:1.10.287.130 190 248 9.0E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 SMART SM00091 95 161 0.0097 T 22-04-2016 IPR000014 PAS domain R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 Pfam PF11808 Domain of unknown function (DUF3329) 5 86 8.1E-7 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 PANTHER PTHR24423 77 418 7.7E-99 T 22-04-2016 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 369 2.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 413 2.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 355 2.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 394 2.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 Pfam PF00989 PAS fold 96 156 1.5E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 R615_RS00740 584df617733cbbc1c88612ea47e9ec49 418 SMART SM00387 305 416 4.8E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS07480 68cf51332fda8f296c72215df56b6391 479 Gene3D G3DSA:3.30.1330.60 350 458 3.4E-25 T 22-04-2016 IPR006665 OmpA-like domain R615_RS07480 68cf51332fda8f296c72215df56b6391 479 Pfam PF12849 PBP superfamily domain 99 314 5.4E-28 T 22-04-2016 IPR024370 PBP domain R615_RS07480 68cf51332fda8f296c72215df56b6391 479 PANTHER PTHR30570 51 72 5.6E-54 T 22-04-2016 R615_RS07480 68cf51332fda8f296c72215df56b6391 479 PANTHER PTHR30570 99 377 5.6E-54 T 22-04-2016 R615_RS07480 68cf51332fda8f296c72215df56b6391 479 Pfam PF00691 OmpA family 360 452 2.6E-16 T 22-04-2016 IPR006665 OmpA-like domain R615_RS07480 68cf51332fda8f296c72215df56b6391 479 SUPERFAMILY SSF103088 349 458 4.58E-23 T 22-04-2016 IPR006665 OmpA-like domain R615_RS07480 68cf51332fda8f296c72215df56b6391 479 Gene3D G3DSA:3.40.190.10 158 288 3.0E-32 T 22-04-2016 R615_RS07480 68cf51332fda8f296c72215df56b6391 479 PANTHER PTHR30570:SF1 51 72 5.6E-54 T 22-04-2016 R615_RS07480 68cf51332fda8f296c72215df56b6391 479 PANTHER PTHR30570:SF1 99 377 5.6E-54 T 22-04-2016 R615_RS07480 68cf51332fda8f296c72215df56b6391 479 SUPERFAMILY SSF53850 102 370 8.31E-61 T 22-04-2016 R615_RS07480 68cf51332fda8f296c72215df56b6391 479 SUPERFAMILY SSF53850 51 70 8.31E-61 T 22-04-2016 R615_RS14430 bd78df9043b4b2d49324ae96d380fe97 223 Gene3D G3DSA:3.90.850.10 10 218 7.2E-71 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 R615_RS14430 bd78df9043b4b2d49324ae96d380fe97 223 SUPERFAMILY SSF56529 9 215 1.7E-65 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 R615_RS14430 bd78df9043b4b2d49324ae96d380fe97 223 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 17 208 2.6E-49 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 R615_RS14430 bd78df9043b4b2d49324ae96d380fe97 223 PANTHER PTHR11820:SF7 17 218 3.6E-79 T 22-04-2016 R615_RS14430 bd78df9043b4b2d49324ae96d380fe97 223 PANTHER PTHR11820 17 218 3.6E-79 T 22-04-2016 R615_RS09935 a1cfcf3f3bdae4f3560511b487b9a57a 717 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 337 352 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS09935 a1cfcf3f3bdae4f3560511b487b9a57a 717 Pfam PF00120 Glutamine synthetase, catalytic domain 199 401 3.3E-21 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS09935 a1cfcf3f3bdae4f3560511b487b9a57a 717 PANTHER PTHR20852 124 421 5.5E-75 T 22-04-2016 R615_RS09935 a1cfcf3f3bdae4f3560511b487b9a57a 717 SMART SM01230 192 477 5.3E-47 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS09935 a1cfcf3f3bdae4f3560511b487b9a57a 717 Gene3D G3DSA:3.30.590.10 199 416 1.6E-84 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 R615_RS09935 a1cfcf3f3bdae4f3560511b487b9a57a 717 Gene3D G3DSA:3.30.590.10 459 600 1.6E-84 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 R615_RS09935 a1cfcf3f3bdae4f3560511b487b9a57a 717 SUPERFAMILY SSF55931 215 416 6.67E-73 T 22-04-2016 R615_RS09935 a1cfcf3f3bdae4f3560511b487b9a57a 717 SUPERFAMILY SSF55931 459 606 6.67E-73 T 22-04-2016 R615_RS09935 a1cfcf3f3bdae4f3560511b487b9a57a 717 PANTHER PTHR20852:SF14 124 421 5.5E-75 T 22-04-2016 R615_RS09935 a1cfcf3f3bdae4f3560511b487b9a57a 717 Pfam PF12437 Glutamine synthetase type III N terminal 29 191 2.0E-64 T 22-04-2016 IPR022147 Glutamine synthetase type III N-terminal GO:0004356 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS14020 316f139bca8c086aca7973ae69a8553d 100 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 95 2.0E-25 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 R615_RS14020 316f139bca8c086aca7973ae69a8553d 100 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 97 20.915 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 R615_RS14020 316f139bca8c086aca7973ae69a8553d 100 Gene3D G3DSA:3.30.1360.20 3 98 7.5E-29 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 R615_RS14020 316f139bca8c086aca7973ae69a8553d 100 SUPERFAMILY SSF55248 2 98 5.23E-29 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 R615_RS14020 316f139bca8c086aca7973ae69a8553d 100 PANTHER PTHR12599 5 97 4.7E-21 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 R615_RS04185 776ae4306210a1cdc669fd3a81c1bbad 223 Gene3D G3DSA:1.20.1050.10 81 199 1.1E-44 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS04185 776ae4306210a1cdc669fd3a81c1bbad 223 SUPERFAMILY SSF52833 1 80 4.49E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS04185 776ae4306210a1cdc669fd3a81c1bbad 223 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 196 7.1E-9 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal R615_RS04185 776ae4306210a1cdc669fd3a81c1bbad 223 SUPERFAMILY SSF47616 74 202 3.48E-34 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS04185 776ae4306210a1cdc669fd3a81c1bbad 223 Gene3D G3DSA:3.40.30.10 1 80 7.2E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS04185 776ae4306210a1cdc669fd3a81c1bbad 223 PANTHER PTHR11260 2 205 2.7E-71 T 22-04-2016 R615_RS04185 776ae4306210a1cdc669fd3a81c1bbad 223 PANTHER PTHR11260:SF178 2 205 2.7E-71 T 22-04-2016 R615_RS04185 776ae4306210a1cdc669fd3a81c1bbad 223 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 77 2.1E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 R615_RS02380 de105ea66f9abd691a25259a85f79a59 279 PANTHER PTHR11364 10 273 1.7E-59 T 22-04-2016 R615_RS02380 de105ea66f9abd691a25259a85f79a59 279 Gene3D G3DSA:3.40.250.10 151 275 8.2E-27 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS02380 de105ea66f9abd691a25259a85f79a59 279 Pfam PF00581 Rhodanese-like domain 154 267 4.7E-12 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS02380 de105ea66f9abd691a25259a85f79a59 279 Pfam PF00581 Rhodanese-like domain 15 123 4.8E-11 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS02380 de105ea66f9abd691a25259a85f79a59 279 SUPERFAMILY SSF52821 10 179 1.44E-33 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS02380 de105ea66f9abd691a25259a85f79a59 279 SMART SM00450 13 128 2.0E-16 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS02380 de105ea66f9abd691a25259a85f79a59 279 SMART SM00450 152 271 4.5E-13 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS02380 de105ea66f9abd691a25259a85f79a59 279 Gene3D G3DSA:3.40.250.10 10 142 1.8E-33 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS02380 de105ea66f9abd691a25259a85f79a59 279 SUPERFAMILY SSF52821 146 277 8.91E-26 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS02380 de105ea66f9abd691a25259a85f79a59 279 ProSitePatterns PS00380 Rhodanese signature 1. 38 49 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 SUPERFAMILY SSF51905 1 288 6.48E-86 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 SUPERFAMILY SSF51905 472 530 6.48E-86 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 PANTHER PTHR11552 2 530 2.0E-219 T 22-04-2016 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 Gene3D G3DSA:3.50.50.60 2 123 5.7E-122 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 Gene3D G3DSA:3.50.50.60 185 313 5.7E-122 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 Gene3D G3DSA:3.50.50.60 466 529 5.7E-122 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 Pfam PF05199 GMC oxidoreductase 387 523 1.2E-42 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 79 102 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 PIRSF PIRSF000137 1 531 1.1E-153 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 254 268 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 Pfam PF00732 GMC oxidoreductase 2 295 3.1E-99 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 SUPERFAMILY SSF54373 290 473 1.67E-57 T 22-04-2016 R615_RS10180 d7203139ca5fab676e043e7e801d3d2f 531 PANTHER PTHR11552:SF51 2 530 2.0E-219 T 22-04-2016 R615_RS07870 de200207be22947835664243b3312515 278 Gene3D G3DSA:3.30.1130.10 17 121 1.0E-35 T 22-04-2016 R615_RS07870 de200207be22947835664243b3312515 278 Pfam PF14489 QueF-like protein 191 265 9.2E-22 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS07870 de200207be22947835664243b3312515 278 PANTHER PTHR34354 1 278 1.6E-73 T 22-04-2016 R615_RS07870 de200207be22947835664243b3312515 278 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 17 120 2.5E-42 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS07870 de200207be22947835664243b3312515 278 PIRSF PIRSF004750 2 278 3.5E-106 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS07870 de200207be22947835664243b3312515 278 SUPERFAMILY SSF55620 182 262 8.89E-6 T 22-04-2016 R615_RS07870 de200207be22947835664243b3312515 278 TIGRFAM TIGR03138 QueF: queuine synthase 7 278 3.0E-109 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS07870 de200207be22947835664243b3312515 278 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 278 125.3 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS07870 de200207be22947835664243b3312515 278 PANTHER PTHR34354:SF1 1 278 1.6E-73 T 22-04-2016 R615_RS07870 de200207be22947835664243b3312515 278 Gene3D G3DSA:3.30.1130.10 144 271 6.2E-44 T 22-04-2016 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 SUPERFAMILY SSF81301 33 177 5.45E-23 T 22-04-2016 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 Gene3D G3DSA:1.10.3210.10 433 620 4.0E-18 T 22-04-2016 IPR006674 HD domain R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 PIRSF PIRSF006288 15 893 1.1E-275 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 Pfam PF08335 GlnD PII-uridylyltransferase 185 323 1.4E-31 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 45 884 4.6E-256 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 PANTHER PTHR13734 104 698 5.4E-88 T 22-04-2016 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 SUPERFAMILY SSF55021 702 775 7.02E-6 T 22-04-2016 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 Pfam PF01966 HD domain 462 592 1.5E-7 T 22-04-2016 IPR006674 HD domain R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 SUPERFAMILY SSF81593 193 295 1.18E-7 T 22-04-2016 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 SMART SM00471 457 604 7.1E-11 T 22-04-2016 IPR003607 HD/PDEase domain R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 PANTHER PTHR13734:SF45 104 698 5.4E-88 T 22-04-2016 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 SUPERFAMILY SSF81891 354 604 3.92E-14 T 22-04-2016 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 895 265.809 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 Gene3D G3DSA:3.30.460.10 71 164 5.1E-8 T 22-04-2016 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 Gene3D G3DSA:3.30.70.260 812 867 1.5E-7 T 22-04-2016 R615_RS05315 179c83c71391f7689bcd5772d6ef7ebf 895 SUPERFAMILY SSF55021 811 865 2.54E-8 T 22-04-2016 R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 Pfam PF05738 Cna protein B-type domain 771 800 7.0E-6 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 585 595 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PANTHER PTHR10795 579 665 8.0E-62 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PANTHER PTHR10795 1 26 8.0E-62 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PANTHER PTHR10795 403 560 8.0E-62 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PANTHER PTHR10795 266 383 8.0E-62 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PANTHER PTHR10795 210 246 8.0E-62 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 Gene3D G3DSA:3.40.50.200 289 646 1.8E-92 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 Gene3D G3DSA:2.60.120.380 58 187 2.9E-6 T 22-04-2016 R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 Gene3D G3DSA:2.60.40.10 767 802 2.3E-8 T 22-04-2016 IPR013783 Immunoglobulin-like fold R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 Pfam PF00082 Subtilase family 343 634 6.6E-50 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 348 359 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PRINTS PR00723 Subtilisin serine protease family (S8) signature 400 413 1.7E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PRINTS PR00723 Subtilisin serine protease family (S8) signature 343 362 1.7E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PRINTS PR00723 Subtilisin serine protease family (S8) signature 584 600 1.7E-18 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 404 414 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PANTHER PTHR10795:SF419 579 665 8.0E-62 T 22-04-2016 R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PANTHER PTHR10795:SF419 1 26 8.0E-62 T 22-04-2016 R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PANTHER PTHR10795:SF419 403 560 8.0E-62 T 22-04-2016 R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PANTHER PTHR10795:SF419 266 383 8.0E-62 T 22-04-2016 R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PANTHER PTHR10795:SF419 210 246 8.0E-62 T 22-04-2016 R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 PIRSF PIRSF037893 2 883 3.7E-217 T 22-04-2016 IPR017309 Peptidase S8A, subtilisin-related, proteobacteria R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 SUPERFAMILY SSF52743 321 648 3.01E-80 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 R615_RS00230 d30fd9b26135942fdd18ee6c807bda58 888 SUPERFAMILY SSF117074 754 801 1.83E-7 T 22-04-2016 R615_RS08390 976432e830c70f024bab58f6b5c54cbf 284 SUPERFAMILY SSF56596 2 249 1.16E-5 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 R615_RS15570 2e8d0dc537117fb5184262704d893893 133 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 6 46 1.0E-6 T 22-04-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system R615_RS12950 eb1845e004818c079a96ee4e83505709 290 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 36 281 3.1E-85 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 R615_RS12950 eb1845e004818c079a96ee4e83505709 290 PANTHER PTHR18895 3 286 1.7E-98 T 22-04-2016 R615_RS12950 eb1845e004818c079a96ee4e83505709 290 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 191 197 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 R615_RS12950 eb1845e004818c079a96ee4e83505709 290 Gene3D G3DSA:1.10.8.10 14 97 1.4E-26 T 22-04-2016 R615_RS12950 eb1845e004818c079a96ee4e83505709 290 PANTHER PTHR18895:SF64 3 286 1.7E-98 T 22-04-2016 R615_RS12950 eb1845e004818c079a96ee4e83505709 290 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 284 6.3E-74 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 R615_RS12950 eb1845e004818c079a96ee4e83505709 290 SUPERFAMILY SSF53335 17 272 2.67E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12950 eb1845e004818c079a96ee4e83505709 290 Gene3D G3DSA:3.40.50.150 99 286 6.2E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12950 eb1845e004818c079a96ee4e83505709 290 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 15 286 43.226 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 R615_RS12950 eb1845e004818c079a96ee4e83505709 290 Pfam PF05175 Methyltransferase small domain 119 198 2.6E-17 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 R615_RS16550 f0611b04d7d0e5596e50f6147324851c 220 PANTHER PTHR10000 3 220 2.7E-55 T 22-04-2016 R615_RS16550 f0611b04d7d0e5596e50f6147324851c 220 SUPERFAMILY SSF56784 3 211 2.85E-36 T 22-04-2016 IPR023214 HAD-like domain R615_RS16550 f0611b04d7d0e5596e50f6147324851c 220 PANTHER PTHR10000:SF10 3 220 2.7E-55 T 22-04-2016 R615_RS16550 f0611b04d7d0e5596e50f6147324851c 220 Gene3D G3DSA:1.20.1440.100 15 82 6.3E-28 T 22-04-2016 R615_RS16550 f0611b04d7d0e5596e50f6147324851c 220 Gene3D G3DSA:3.40.50.1000 83 218 4.5E-48 T 22-04-2016 IPR023214 HAD-like domain R615_RS16550 f0611b04d7d0e5596e50f6147324851c 220 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 200 3.9E-43 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial R615_RS16550 f0611b04d7d0e5596e50f6147324851c 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 189 5.3E-24 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 R615_RS16550 f0611b04d7d0e5596e50f6147324851c 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 1.7E-36 T 22-04-2016 R615_RS03510 b8a1f8c6f54df0dc2e88dbe19bcf4bd0 274 SUPERFAMILY SSF53335 29 230 6.47E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03510 b8a1f8c6f54df0dc2e88dbe19bcf4bd0 274 PIRSF PIRSF031679 1 274 2.0E-91 T 22-04-2016 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted R615_RS03510 b8a1f8c6f54df0dc2e88dbe19bcf4bd0 274 Gene3D G3DSA:3.40.50.150 56 234 2.9E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 PANTHER PTHR30053 1 188 3.9E-84 T 22-04-2016 R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 Gene3D G3DSA:2.40.50.140 67 130 4.5E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 Gene3D G3DSA:2.30.30.30 1 65 1.8E-29 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 SUPERFAMILY SSF50249 131 188 2.74E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 SUPERFAMILY SSF50249 69 129 2.14E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 3.1E-27 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 Gene3D G3DSA:2.40.50.140 131 188 2.9E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 SMART SM01185 69 124 8.5E-20 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.8E-18 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 SUPERFAMILY SSF50104 2 63 1.55E-20 T 22-04-2016 IPR008991 Translation protein SH3-like domain R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 PIRSF PIRSF005901 2 188 1.0E-63 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 188 5.0E-74 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 3.6E-26 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 SMART SM00841 132 187 9.7E-35 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 R615_RS02345 bbdedf2daa673d631ed82566dd5f6367 188 Hamap MF_00141 Elongation factor P [efp]. 3 188 46.72 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 R615_RS12715 6e44cb10d324550a6c1fe9d951bc4093 338 PANTHER PTHR33987 1 286 7.8E-70 T 22-04-2016 R615_RS12715 6e44cb10d324550a6c1fe9d951bc4093 338 Gene3D G3DSA:3.60.21.10 37 334 1.5E-15 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS12715 6e44cb10d324550a6c1fe9d951bc4093 338 Pfam PF09423 PhoD-like phosphatase 38 284 3.0E-17 T 22-04-2016 IPR018946 Alkaline phosphatase D-related R615_RS12715 6e44cb10d324550a6c1fe9d951bc4093 338 SUPERFAMILY SSF56300 196 275 2.11E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS12715 6e44cb10d324550a6c1fe9d951bc4093 338 SUPERFAMILY SSF56300 21 165 2.11E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 271 2.3E-70 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 SUPERFAMILY SSF52540 7 644 6.65E-162 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 Pfam PF13361 UvrD-like helicase C-terminal domain 277 620 2.9E-67 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 PANTHER PTHR11070:SF19 1 677 0.0 T 22-04-2016 R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 7 675 38.638 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 Gene3D G3DSA:3.40.50.300 6 110 7.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 Gene3D G3DSA:3.40.50.300 188 285 7.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 Gene3D G3DSA:1.10.10.160 114 187 1.3E-19 T 22-04-2016 IPR013986 DExx box DNA helicase domain R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 Gene3D G3DSA:3.40.50.300 286 389 5.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 Gene3D G3DSA:3.40.50.300 558 645 5.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 PANTHER PTHR11070 1 677 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 8 674 1.8E-304 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 R615_RS00260 4e0cabcfced807c397b34ffb5cb86eef 677 Gene3D G3DSA:1.10.486.10 390 528 6.9E-37 T 22-04-2016 R615_RS02785 869f1b9cb69be4b402f1b911d5eff055 155 Gene3D G3DSA:3.30.700.10 7 120 9.5E-9 T 22-04-2016 R615_RS02785 869f1b9cb69be4b402f1b911d5eff055 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS02785 869f1b9cb69be4b402f1b911d5eff055 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 6.3E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS02785 869f1b9cb69be4b402f1b911d5eff055 155 PANTHER PTHR30093 1 58 1.7E-13 T 22-04-2016 R615_RS02785 869f1b9cb69be4b402f1b911d5eff055 155 SUPERFAMILY SSF54523 7 133 1.49E-14 T 22-04-2016 R615_RS02785 869f1b9cb69be4b402f1b911d5eff055 155 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 24 1.2E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS02785 869f1b9cb69be4b402f1b911d5eff055 155 PANTHER PTHR30093:SF7 1 58 1.7E-13 T 22-04-2016 R615_RS05945 6a6e88cf57eefccc9b617de308e471ab 368 PIRSF PIRSF001456 3 362 1.5E-140 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS05945 6a6e88cf57eefccc9b617de308e471ab 368 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS05945 6a6e88cf57eefccc9b617de308e471ab 368 Hamap MF_00300 Chorismate synthase [aroC]. 10 353 37.457 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS05945 6a6e88cf57eefccc9b617de308e471ab 368 Pfam PF01264 Chorismate synthase 10 346 6.2E-141 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS05945 6a6e88cf57eefccc9b617de308e471ab 368 TIGRFAM TIGR00033 aroC: chorismate synthase 10 351 4.3E-141 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS05945 6a6e88cf57eefccc9b617de308e471ab 368 Gene3D G3DSA:3.60.150.10 10 354 3.0E-157 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS05945 6a6e88cf57eefccc9b617de308e471ab 368 PANTHER PTHR21085 2 352 3.6E-211 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS05945 6a6e88cf57eefccc9b617de308e471ab 368 SUPERFAMILY SSF103263 4 353 1.26E-147 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS05945 6a6e88cf57eefccc9b617de308e471ab 368 ProSitePatterns PS00789 Chorismate synthase signature 3. 320 336 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS05945 6a6e88cf57eefccc9b617de308e471ab 368 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS06290 4b0ee51f4b450134d9fed75bf93c16cc 304 SUPERFAMILY SSF55073 151 297 4.39E-25 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS06290 4b0ee51f4b450134d9fed75bf93c16cc 304 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 297 9.8E-27 T 22-04-2016 IPR000160 GGDEF domain R615_RS06290 4b0ee51f4b450134d9fed75bf93c16cc 304 Gene3D G3DSA:3.30.70.270 148 298 4.2E-28 T 22-04-2016 R615_RS06290 4b0ee51f4b450134d9fed75bf93c16cc 304 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 298 1.0E-27 T 22-04-2016 IPR000160 GGDEF domain R615_RS06290 4b0ee51f4b450134d9fed75bf93c16cc 304 SMART SM00267 135 301 3.1E-22 T 22-04-2016 IPR000160 GGDEF domain R615_RS15040 541d2f77f53c0e36c334d1f80e0c6904 267 PANTHER PTHR15362 33 172 2.2E-34 T 22-04-2016 R615_RS15040 541d2f77f53c0e36c334d1f80e0c6904 267 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 46 206 1.5E-37 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 R615_RS15040 541d2f77f53c0e36c334d1f80e0c6904 267 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 80 102 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 R615_RS15040 541d2f77f53c0e36c334d1f80e0c6904 267 Pfam PF01066 CDP-alcohol phosphatidyltransferase 39 102 2.7E-14 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 R615_RS11685 cde096aa92f0878d988e238544c1e973 164 SUPERFAMILY SSF52833 1 162 1.26E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11685 cde096aa92f0878d988e238544c1e973 164 PANTHER PTHR10681 3 164 1.0E-43 T 22-04-2016 R615_RS11685 cde096aa92f0878d988e238544c1e973 164 Gene3D G3DSA:3.40.30.10 2 164 1.8E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11685 cde096aa92f0878d988e238544c1e973 164 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 164 34.768 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 R615_RS11685 cde096aa92f0878d988e238544c1e973 164 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 R615_RS11685 cde096aa92f0878d988e238544c1e973 164 PANTHER PTHR10681:SF81 3 164 1.0E-43 T 22-04-2016 R615_RS11685 cde096aa92f0878d988e238544c1e973 164 Pfam PF08534 Redoxin 20 161 7.7E-24 T 22-04-2016 IPR013740 Redoxin GO:0016491 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.86E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 2.86E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 2.86E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.86E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 35.246 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 PANTHER PTHR11693 1 286 1.1E-122 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 Pfam PF00231 ATP synthase 5 285 2.2E-89 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 Gene3D G3DSA:3.40.1380.10 64 192 1.1E-40 T 22-04-2016 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 Gene3D G3DSA:1.10.287.80 235 281 1.1E-31 T 22-04-2016 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 Gene3D G3DSA:1.10.287.80 19 60 1.0E-36 T 22-04-2016 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 Gene3D G3DSA:1.10.287.80 201 234 1.0E-36 T 22-04-2016 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 1.6E-106 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 SUPERFAMILY SSF52943 5 286 2.09E-92 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain R615_RS16955 0eb3fe906e93e15a2cc862b674261b7b 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site R615_RS10430 7b784b6691933c019850322f8fbde882 758 PANTHER PTHR30519 1 758 0.0 T 22-04-2016 R615_RS10430 7b784b6691933c019850322f8fbde882 758 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 755 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 R615_RS10430 7b784b6691933c019850322f8fbde882 758 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 311 4.0E-107 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 R615_RS10430 7b784b6691933c019850322f8fbde882 758 PANTHER PTHR30519:SF0 1 758 0.0 T 22-04-2016 R615_RS10430 7b784b6691933c019850322f8fbde882 758 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 428 750 3.1E-138 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 R615_RS10430 7b784b6691933c019850322f8fbde882 758 SUPERFAMILY SSF51726 394 755 6.02E-109 T 22-04-2016 R615_RS10430 7b784b6691933c019850322f8fbde882 758 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 755 33.893 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 R615_RS10430 7b784b6691933c019850322f8fbde882 758 SUPERFAMILY SSF51726 5 390 1.57E-96 T 22-04-2016 R615_RS10430 7b784b6691933c019850322f8fbde882 758 Gene3D G3DSA:3.20.20.210 3 385 1.9E-128 T 22-04-2016 R615_RS10430 7b784b6691933c019850322f8fbde882 758 Gene3D G3DSA:3.20.20.210 389 756 7.4E-119 T 22-04-2016 R615_RS10430 7b784b6691933c019850322f8fbde882 758 PIRSF PIRSF000382 1 758 1.7E-303 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 R615_RS16575 8b53a69933ddba9c942fa6baaa871cc7 407 SUPERFAMILY SSF51905 275 393 7.89E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS16575 8b53a69933ddba9c942fa6baaa871cc7 407 SUPERFAMILY SSF51905 7 185 7.89E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS16575 8b53a69933ddba9c942fa6baaa871cc7 407 Gene3D G3DSA:3.50.50.60 286 325 2.1E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS16575 8b53a69933ddba9c942fa6baaa871cc7 407 Gene3D G3DSA:3.50.50.60 5 188 2.1E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS16575 8b53a69933ddba9c942fa6baaa871cc7 407 Pfam PF01494 FAD binding domain 6 325 4.1E-24 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 R615_RS16575 8b53a69933ddba9c942fa6baaa871cc7 407 PANTHER PTHR13789 7 406 6.9E-117 T 22-04-2016 R615_RS16575 8b53a69933ddba9c942fa6baaa871cc7 407 PANTHER PTHR13789:SF214 7 406 6.9E-117 T 22-04-2016 R615_RS16575 8b53a69933ddba9c942fa6baaa871cc7 407 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 398 1.1E-117 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 R615_RS16575 8b53a69933ddba9c942fa6baaa871cc7 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 8.9E-14 T 22-04-2016 R615_RS16575 8b53a69933ddba9c942fa6baaa871cc7 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 319 8.9E-14 T 22-04-2016 R615_RS16575 8b53a69933ddba9c942fa6baaa871cc7 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 164 179 8.9E-14 T 22-04-2016 R615_RS16575 8b53a69933ddba9c942fa6baaa871cc7 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 8.9E-14 T 22-04-2016 R615_RS00955 e09b275eba981e15e7c8a6e2ad3548c3 248 Pfam PF02698 DUF218 domain 81 238 1.6E-24 T 22-04-2016 IPR003848 Domain of unknown function DUF218 R615_RS00955 e09b275eba981e15e7c8a6e2ad3548c3 248 PANTHER PTHR30336:SF1 1 247 1.5E-45 T 22-04-2016 R615_RS00955 e09b275eba981e15e7c8a6e2ad3548c3 248 PANTHER PTHR30336 1 247 1.5E-45 T 22-04-2016 R615_RS00955 e09b275eba981e15e7c8a6e2ad3548c3 248 Gene3D G3DSA:3.40.50.620 77 209 1.5E-14 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 46.537 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 SUPERFAMILY SSF54211 217 382 3.79E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 SMART SM00433 34 624 1.1E-205 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 625 0.0 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 Pfam PF01751 Toprim domain 413 522 3.8E-13 T 22-04-2016 IPR006171 Toprim domain R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 SUPERFAMILY SSF55874 4 215 4.85E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 Gene3D G3DSA:3.40.50.670 398 611 4.0E-75 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PANTHER PTHR10169:SF45 1 629 0.0 T 22-04-2016 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PANTHER PTHR10169 1 629 0.0 T 22-04-2016 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 558 620 8.8E-25 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 Gene3D G3DSA:3.30.230.10 216 390 2.3E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 6.3E-110 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 SMART SM00387 27 173 4.0E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 Pfam PF00204 DNA gyrase B 218 384 1.1E-39 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.2E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.2E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.2E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.2E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.2E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.2E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.2E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR00418 DNA topoisomerase II family signature 562 578 1.2E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.2E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 Gene3D G3DSA:3.30.565.10 15 213 1.2E-73 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00130 fc5453d84fa9283fb966ac6770b2a138 629 SUPERFAMILY SSF56719 388 621 2.62E-76 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 R615_RS13905 17bf9872dee918a7c469230114110d28 601 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 453 1.3E-21 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS13905 17bf9872dee918a7c469230114110d28 601 Gene3D G3DSA:1.10.540.10 38 162 7.6E-19 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS13905 17bf9872dee918a7c469230114110d28 601 PANTHER PTHR10909 1 480 8.9E-243 T 22-04-2016 R615_RS13905 17bf9872dee918a7c469230114110d28 601 SUPERFAMILY SSF47203 289 477 8.38E-47 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS13905 17bf9872dee918a7c469230114110d28 601 Gene3D G3DSA:1.20.140.10 271 465 1.5E-49 T 22-04-2016 R615_RS13905 17bf9872dee918a7c469230114110d28 601 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 160 5.0E-12 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS13905 17bf9872dee918a7c469230114110d28 601 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 1.6E-9 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria R615_RS13905 17bf9872dee918a7c469230114110d28 601 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 165 273 5.2E-16 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 R615_RS13905 17bf9872dee918a7c469230114110d28 601 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 594 1.3E-36 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain R615_RS13905 17bf9872dee918a7c469230114110d28 601 PANTHER PTHR10909:SF154 1 480 8.9E-243 T 22-04-2016 R615_RS13905 17bf9872dee918a7c469230114110d28 601 SUPERFAMILY SSF56645 37 281 1.7E-56 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 R615_RS13905 17bf9872dee918a7c469230114110d28 601 Gene3D G3DSA:2.40.110.10 163 270 1.9E-25 T 22-04-2016 R615_RS05360 e1c22b5cbeb63a39407832148e2953e9 446 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 446 4.7E-124 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 R615_RS05360 e1c22b5cbeb63a39407832148e2953e9 446 Pfam PF13180 PDZ domain 125 179 1.9E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS05360 e1c22b5cbeb63a39407832148e2953e9 446 Pfam PF13180 PDZ domain 208 280 1.4E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS05360 e1c22b5cbeb63a39407832148e2953e9 446 PANTHER PTHR22939:SF78 164 446 2.5E-73 T 22-04-2016 R615_RS05360 e1c22b5cbeb63a39407832148e2953e9 446 SUPERFAMILY SSF50156 201 287 9.07E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS05360 e1c22b5cbeb63a39407832148e2953e9 446 SMART SM00228 206 275 1.1E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS05360 e1c22b5cbeb63a39407832148e2953e9 446 SMART SM00228 110 182 2.1E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS05360 e1c22b5cbeb63a39407832148e2953e9 446 PANTHER PTHR22939 164 446 2.5E-73 T 22-04-2016 R615_RS05360 e1c22b5cbeb63a39407832148e2953e9 446 Pfam PF02163 Peptidase family M50 5 434 1.9E-82 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 R615_RS05360 e1c22b5cbeb63a39407832148e2953e9 446 Gene3D G3DSA:2.30.42.10 90 183 2.2E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS05360 e1c22b5cbeb63a39407832148e2953e9 446 Gene3D G3DSA:2.30.42.10 195 285 2.0E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS05360 e1c22b5cbeb63a39407832148e2953e9 446 SUPERFAMILY SSF50156 84 181 1.29E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS06035 f0f1c78e9ac40428f7deb1445e66343a 280 PANTHER PTHR33969:SF2 32 277 3.9E-91 T 22-04-2016 R615_RS06035 f0f1c78e9ac40428f7deb1445e66343a 280 PANTHER PTHR33969 32 277 3.9E-91 T 22-04-2016 R615_RS06035 f0f1c78e9ac40428f7deb1445e66343a 280 Hamap MF_01805 Segregation and condensation protein A [scpA]. 48 279 22.396 T 22-04-2016 IPR003768 Segregation and condensation protein A R615_RS06035 f0f1c78e9ac40428f7deb1445e66343a 280 Pfam PF02616 Segregation and condensation protein ScpA 65 275 6.2E-34 T 22-04-2016 IPR003768 Segregation and condensation protein A R615_RS15870 814e4bf9195b56c508463c1517ab4a81 200 Gene3D G3DSA:3.40.1370.10 52 199 5.9E-56 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 R615_RS15870 814e4bf9195b56c508463c1517ab4a81 200 SUPERFAMILY SSF52166 7 199 3.4E-71 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 R615_RS15870 814e4bf9195b56c508463c1517ab4a81 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 197 2.5E-63 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 R615_RS15870 814e4bf9195b56c508463c1517ab4a81 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.409 T 22-04-2016 IPR013005 50S ribosomal protein uL4 R615_RS15870 814e4bf9195b56c508463c1517ab4a81 200 PANTHER PTHR10746 8 199 2.1E-84 T 22-04-2016 IPR013005 50S ribosomal protein uL4 R615_RS15870 814e4bf9195b56c508463c1517ab4a81 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 8.6E-74 T 22-04-2016 IPR013005 50S ribosomal protein uL4 R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 257 340 7.0E-31 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 Gene3D G3DSA:1.10.10.10 264 334 2.3E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 SUPERFAMILY SSF52540 27 259 1.08E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 PANTHER PTHR13779 16 339 5.8E-181 T 22-04-2016 R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 17 242 1.2E-115 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 SUPERFAMILY SSF46785 264 337 2.55E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 260 333 1.1E-32 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 Gene3D G3DSA:3.40.50.300 27 182 4.7E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 31 333 2.4E-146 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 Gene3D G3DSA:1.10.8.60 190 262 4.0E-32 T 22-04-2016 R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 SMART SM00382 58 185 3.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 PANTHER PTHR13779:SF25 16 339 5.8E-181 T 22-04-2016 R615_RS06790 66d472ee4be0433ae77dc1f3f80b1708 347 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 347 177.551 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 R615_RS00885 321d92a4c98fe2ec761fb00b86737693 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.1E-115 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 R615_RS00885 321d92a4c98fe2ec761fb00b86737693 238 SUPERFAMILY SSF54211 1 181 2.08E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS00885 321d92a4c98fe2ec761fb00b86737693 238 Gene3D G3DSA:3.30.230.70 8 237 5.6E-33 T 22-04-2016 IPR027408 PNPase/RNase PH domain R615_RS00885 321d92a4c98fe2ec761fb00b86737693 238 PANTHER PTHR11953 1 237 1.8E-85 T 22-04-2016 R615_RS00885 321d92a4c98fe2ec761fb00b86737693 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 224 9.0E-9 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 R615_RS00885 321d92a4c98fe2ec761fb00b86737693 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 47.98 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 R615_RS00885 321d92a4c98fe2ec761fb00b86737693 238 SUPERFAMILY SSF55666 152 237 3.93E-24 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 R615_RS00885 321d92a4c98fe2ec761fb00b86737693 238 PANTHER PTHR11953:SF0 1 237 1.8E-85 T 22-04-2016 R615_RS00885 321d92a4c98fe2ec761fb00b86737693 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site R615_RS00885 321d92a4c98fe2ec761fb00b86737693 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.1E-24 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 R615_RS07880 99902965a829b66804c1f796dd19133b 193 Pfam PF00881 Nitroreductase family 7 163 4.3E-22 T 22-04-2016 IPR029479 Nitroreductase R615_RS07880 99902965a829b66804c1f796dd19133b 193 SUPERFAMILY SSF55469 1 183 2.62E-34 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 R615_RS07880 99902965a829b66804c1f796dd19133b 193 PIRSF PIRSF000232 1 186 1.4E-54 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- R615_RS07880 99902965a829b66804c1f796dd19133b 193 Gene3D G3DSA:3.40.109.10 1 173 6.7E-34 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 R615_RS07880 99902965a829b66804c1f796dd19133b 193 PANTHER PTHR23026:SF107 1 189 4.1E-47 T 22-04-2016 R615_RS07880 99902965a829b66804c1f796dd19133b 193 PANTHER PTHR23026 1 189 4.1E-47 T 22-04-2016 R615_RS12940 e923abdd9a942df3e1fee84828f41788 425 SUPERFAMILY SSF51905 127 309 1.59E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12940 e923abdd9a942df3e1fee84828f41788 425 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.3E-5 T 22-04-2016 R615_RS12940 e923abdd9a942df3e1fee84828f41788 425 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 3.3E-5 T 22-04-2016 R615_RS12940 e923abdd9a942df3e1fee84828f41788 425 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 281 303 3.3E-5 T 22-04-2016 R615_RS12940 e923abdd9a942df3e1fee84828f41788 425 SUPERFAMILY SSF51905 3 109 1.45E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12940 e923abdd9a942df3e1fee84828f41788 425 SUPERFAMILY SSF51905 257 340 1.45E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12940 e923abdd9a942df3e1fee84828f41788 425 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 307 2.8E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12940 e923abdd9a942df3e1fee84828f41788 425 PANTHER PTHR10632 1 424 1.5E-154 T 22-04-2016 R615_RS12940 e923abdd9a942df3e1fee84828f41788 425 Gene3D G3DSA:3.50.50.60 105 244 2.4E-4 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12940 e923abdd9a942df3e1fee84828f41788 425 PANTHER PTHR10632:SF7 1 424 1.5E-154 T 22-04-2016 R615_RS12940 e923abdd9a942df3e1fee84828f41788 425 Gene3D G3DSA:3.50.50.60 2 104 8.9E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12940 e923abdd9a942df3e1fee84828f41788 425 Gene3D G3DSA:3.50.50.60 264 342 8.9E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS16970 9d732259cf82acc66168d916a6d5de45 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.525 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 R615_RS16970 9d732259cf82acc66168d916a6d5de45 156 Gene3D G3DSA:1.20.5.620 64 122 1.2E-20 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain R615_RS16970 9d732259cf82acc66168d916a6d5de45 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.9E-48 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 R615_RS16970 9d732259cf82acc66168d916a6d5de45 156 PANTHER PTHR33445 1 156 2.7E-41 T 22-04-2016 R615_RS16970 9d732259cf82acc66168d916a6d5de45 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 4.6E-33 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 R615_RS16970 9d732259cf82acc66168d916a6d5de45 156 SUPERFAMILY SSF81573 64 121 2.35E-13 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain R615_RS14680 0178210d356af860db104e1494fe1b6b 160 Pfam PF04273 Putative phosphatase (DUF442) 12 114 3.4E-12 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- R615_RS14680 0178210d356af860db104e1494fe1b6b 160 SUPERFAMILY SSF52799 8 126 1.27E-10 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like R615_RS14680 0178210d356af860db104e1494fe1b6b 160 Gene3D G3DSA:3.90.190.10 3 125 1.5E-21 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like R615_RS09130 544cc668e603f726a53ad827749deb99 325 Pfam PF00849 RNA pseudouridylate synthase 104 252 1.3E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS09130 544cc668e603f726a53ad827749deb99 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS09130 544cc668e603f726a53ad827749deb99 325 SUPERFAMILY SSF55120 97 317 1.28E-60 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS09130 544cc668e603f726a53ad827749deb99 325 Gene3D G3DSA:3.10.290.10 23 71 1.3E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS09130 544cc668e603f726a53ad827749deb99 325 SMART SM00363 23 82 6.4E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS09130 544cc668e603f726a53ad827749deb99 325 PANTHER PTHR11079 1 324 2.4E-120 T 22-04-2016 R615_RS09130 544cc668e603f726a53ad827749deb99 325 PANTHER PTHR11079:SF84 1 324 2.4E-120 T 22-04-2016 R615_RS09130 544cc668e603f726a53ad827749deb99 325 SUPERFAMILY SSF55174 22 73 1.13E-8 T 22-04-2016 R615_RS09130 544cc668e603f726a53ad827749deb99 325 Pfam PF01479 S4 domain 23 69 2.2E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS09130 544cc668e603f726a53ad827749deb99 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 315 1.7E-79 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS15760 acbadc7a4c8c59f025907a12fc722eee 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 35.512 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 R615_RS15760 acbadc7a4c8c59f025907a12fc722eee 206 PANTHER PTHR11831 1 206 6.2E-91 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 R615_RS15760 acbadc7a4c8c59f025907a12fc722eee 206 Gene3D G3DSA:1.10.1050.10 1 98 1.4E-40 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 R615_RS15760 acbadc7a4c8c59f025907a12fc722eee 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.5E-29 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 R615_RS15760 acbadc7a4c8c59f025907a12fc722eee 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 6.9E-81 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 R615_RS15760 acbadc7a4c8c59f025907a12fc722eee 206 Gene3D G3DSA:3.10.290.10 99 198 3.0E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS15760 acbadc7a4c8c59f025907a12fc722eee 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 R615_RS15760 acbadc7a4c8c59f025907a12fc722eee 206 SUPERFAMILY SSF55174 3 206 5.36E-68 T 22-04-2016 R615_RS15760 acbadc7a4c8c59f025907a12fc722eee 206 PANTHER PTHR11831:SF4 1 206 6.2E-91 T 22-04-2016 R615_RS15760 acbadc7a4c8c59f025907a12fc722eee 206 Pfam PF01479 S4 domain 97 143 1.5E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS15760 acbadc7a4c8c59f025907a12fc722eee 206 SMART SM00363 96 160 1.8E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS15760 acbadc7a4c8c59f025907a12fc722eee 206 SMART SM01390 3 95 1.3E-47 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 R615_RS12440 e3af53d89c3d41b3cf2e47583872a800 259 Gene3D G3DSA:3.40.50.150 60 253 8.8E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12440 e3af53d89c3d41b3cf2e47583872a800 259 PANTHER PTHR36112:SF1 33 258 9.6E-83 T 22-04-2016 R615_RS12440 e3af53d89c3d41b3cf2e47583872a800 259 PANTHER PTHR36112 33 258 9.6E-83 T 22-04-2016 R615_RS12440 e3af53d89c3d41b3cf2e47583872a800 259 Pfam PF04445 Putative SAM-dependent methyltransferase 33 251 8.6E-83 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 R615_RS12440 e3af53d89c3d41b3cf2e47583872a800 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 2 253 35.915 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 R615_RS12440 e3af53d89c3d41b3cf2e47583872a800 259 SUPERFAMILY SSF53335 8 252 4.01E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS02340 1b833bb6103489dff15796be7d4265a7 337 SUPERFAMILY SSF102114 102 323 1.57E-31 T 22-04-2016 R615_RS02340 1b833bb6103489dff15796be7d4265a7 337 TIGRFAM TIGR00238 TIGR00238: KamA family protein 10 327 3.9E-102 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase R615_RS02340 1b833bb6103489dff15796be7d4265a7 337 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 14 334 6.9E-137 T 22-04-2016 IPR022462 Lysine-2,3-aminomutase-like R615_RS02340 1b833bb6103489dff15796be7d4265a7 337 Pfam PF04055 Radical SAM superfamily 117 241 2.0E-11 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 R615_RS02340 1b833bb6103489dff15796be7d4265a7 337 Pfam PF13353 4Fe-4S single cluster domain 110 182 1.5E-8 T 22-04-2016 R615_RS02340 1b833bb6103489dff15796be7d4265a7 337 PIRSF PIRSF004911 3 337 6.7E-114 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase R615_RS02340 1b833bb6103489dff15796be7d4265a7 337 PANTHER PTHR30538:SF1 10 334 7.0E-117 T 22-04-2016 R615_RS02340 1b833bb6103489dff15796be7d4265a7 337 PANTHER PTHR30538 10 334 7.0E-117 T 22-04-2016 R615_RS02340 1b833bb6103489dff15796be7d4265a7 337 Gene3D G3DSA:3.20.20.70 105 315 2.7E-22 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 Gene3D G3DSA:3.30.1480.10 1 127 1.5E-42 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 PANTHER PTHR22648:SF0 1 452 1.1E-169 T 22-04-2016 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 SUPERFAMILY SSF47794 433 495 1.52E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 SUPERFAMILY SSF50249 135 202 4.99E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS03940 c91db09543e8258cd520b8d514db5111 498 PANTHER PTHR22648 1 452 1.1E-169 T 22-04-2016 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 SUPERFAMILY SSF54814 203 282 2.55E-27 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 Gene3D G3DSA:3.30.300.20 202 281 3.1E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta R615_RS03940 c91db09543e8258cd520b8d514db5111 498 Pfam PF13184 NusA-like KH domain 233 301 4.3E-25 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 Pfam PF14520 Helix-hairpin-helix domain 436 490 8.0E-9 T 22-04-2016 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 SUPERFAMILY SSF69705 1 129 2.49E-37 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 Gene3D G3DSA:3.30.300.20 282 351 9.0E-28 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta R615_RS03940 c91db09543e8258cd520b8d514db5111 498 SUPERFAMILY SSF54814 283 346 5.95E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 417 3.7E-20 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication R615_RS03940 c91db09543e8258cd520b8d514db5111 498 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 493 1.3E-19 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication R615_RS03940 c91db09543e8258cd520b8d514db5111 498 SMART SM00322 233 297 41.0 T 22-04-2016 IPR004087 K Homology domain GO:0003676 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 SMART SM00322 305 365 0.0012 T 22-04-2016 IPR004087 K Homology domain GO:0003676 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 6.5E-121 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 SMART SM00316 136 203 6.0E-12 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 Gene3D G3DSA:1.10.150.20 433 496 1.1E-22 T 22-04-2016 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 Gene3D G3DSA:1.10.150.20 358 424 3.1E-23 T 22-04-2016 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 Pfam PF00575 S1 RNA binding domain 135 198 2.1E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 Pfam PF08529 NusA N-terminal domain 4 126 2.2E-37 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 Gene3D G3DSA:2.40.50.140 131 201 1.9E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS03940 c91db09543e8258cd520b8d514db5111 498 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.294 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 R615_RS03940 c91db09543e8258cd520b8d514db5111 498 SUPERFAMILY SSF47794 359 421 7.38E-17 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 SUPERFAMILY SSF82866 296 483 1.11E-33 T 22-04-2016 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 SUPERFAMILY SSF82714 181 260 5.75E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 Gene3D G3DSA:1.20.1640.10 289 488 8.5E-39 T 22-04-2016 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 Gene3D G3DSA:3.30.70.1430 547 620 5.2E-4 T 22-04-2016 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 SUPERFAMILY SSF82693 543 617 1.05E-5 T 22-04-2016 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 6.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 6.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 6.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 6.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 PRINTS PR00702 Acriflavin resistance protein family signature 529 546 6.1E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 Gene3D G3DSA:3.30.2090.10 180 260 1.2E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 Gene3D G3DSA:3.30.70.1430 42 132 6.5E-20 T 22-04-2016 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 SUPERFAMILY SSF82693 43 132 2.04E-16 T 22-04-2016 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 SUPERFAMILY SSF82693 266 309 2.72E-5 T 22-04-2016 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 SUPERFAMILY SSF82693 145 179 2.72E-5 T 22-04-2016 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 PANTHER PTHR32063 1 711 1.9E-132 T 22-04-2016 R615_RS14395 cd5535a4e9625ee6d370d95a47cbae4a 718 Pfam PF00873 AcrB/AcrD/AcrF family 15 713 1.7E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS16670 dafce68391ea8e35b1efe8a621bc7c0e 228 PANTHER PTHR30249:SF5 1 228 5.6E-63 T 22-04-2016 R615_RS16670 dafce68391ea8e35b1efe8a621bc7c0e 228 PANTHER PTHR30249 1 228 5.6E-63 T 22-04-2016 R615_RS16670 dafce68391ea8e35b1efe8a621bc7c0e 228 Pfam PF04172 LrgB-like family 16 228 4.9E-65 T 22-04-2016 IPR007300 CidB/LrgB family R615_RS04180 e207009e0ea498e976041e77ed09acfa 203 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 76 8.9E-19 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 R615_RS04180 e207009e0ea498e976041e77ed09acfa 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 199 4.9E-15 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal R615_RS04180 e207009e0ea498e976041e77ed09acfa 203 SUPERFAMILY SSF52833 1 90 3.43E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS04180 e207009e0ea498e976041e77ed09acfa 203 Gene3D G3DSA:3.40.30.10 1 90 8.0E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS04180 e207009e0ea498e976041e77ed09acfa 203 PANTHER PTHR11260 1 203 4.5E-49 T 22-04-2016 R615_RS04180 e207009e0ea498e976041e77ed09acfa 203 Gene3D G3DSA:1.20.1050.10 91 201 2.1E-22 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS04180 e207009e0ea498e976041e77ed09acfa 203 SUPERFAMILY SSF47616 80 202 1.95E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS01940 4702e2977574b1c5fe6472ec63a93972 86 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 1.9E-35 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 R615_RS01940 4702e2977574b1c5fe6472ec63a93972 86 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 2.9E-39 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 R615_RS01940 4702e2977574b1c5fe6472ec63a93972 86 SUPERFAMILY SSF143011 1 83 1.83E-29 T 22-04-2016 R615_RS01940 4702e2977574b1c5fe6472ec63a93972 86 PANTHER PTHR38039 1 85 8.7E-36 T 22-04-2016 R615_RS01940 4702e2977574b1c5fe6472ec63a93972 86 PANTHER PTHR38039:SF1 1 85 8.7E-36 T 22-04-2016 R615_RS03810 5403a19dc700ed1a15935bf201f0de11 98 PANTHER PTHR37483:SF1 2 96 2.4E-32 T 22-04-2016 R615_RS03810 5403a19dc700ed1a15935bf201f0de11 98 PANTHER PTHR37483 2 96 2.4E-32 T 22-04-2016 R615_RS03810 5403a19dc700ed1a15935bf201f0de11 98 Gene3D G3DSA:3.10.20.280 2 91 1.4E-33 T 22-04-2016 IPR005346 RnfH protein R615_RS03810 5403a19dc700ed1a15935bf201f0de11 98 SUPERFAMILY SSF54285 4 81 6.67E-23 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp R615_RS03810 5403a19dc700ed1a15935bf201f0de11 98 Hamap MF_00460 Protein RnfH [rnfH]. 5 97 24.164 T 22-04-2016 IPR005346 RnfH protein R615_RS03810 5403a19dc700ed1a15935bf201f0de11 98 Pfam PF03658 RnfH family Ubiquitin 5 88 9.1E-33 T 22-04-2016 IPR005346 RnfH protein R615_RS14800 b2a0e3bdf0664972367a4f1086f86e6e 735 PANTHER PTHR30580 1 735 2.3E-246 T 22-04-2016 R615_RS14800 b2a0e3bdf0664972367a4f1086f86e6e 735 SUPERFAMILY SSF52540 191 375 6.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14800 b2a0e3bdf0664972367a4f1086f86e6e 735 SMART SM00490 490 587 8.7E-10 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS14800 b2a0e3bdf0664972367a4f1086f86e6e 735 Pfam PF00270 DEAD/DEAH box helicase 204 362 4.6E-15 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS14800 b2a0e3bdf0664972367a4f1086f86e6e 735 SUPERFAMILY SSF52540 392 611 6.56E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14800 b2a0e3bdf0664972367a4f1086f86e6e 735 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 734 23.987 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 R615_RS14800 b2a0e3bdf0664972367a4f1086f86e6e 735 TIGRFAM TIGR00595 priA: primosomal protein N' 219 732 1.8E-180 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 R615_RS14800 b2a0e3bdf0664972367a4f1086f86e6e 735 Gene3D G3DSA:3.40.50.300 404 426 1.5E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14800 b2a0e3bdf0664972367a4f1086f86e6e 735 Gene3D G3DSA:3.40.50.300 491 630 1.5E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14800 b2a0e3bdf0664972367a4f1086f86e6e 735 Gene3D G3DSA:3.40.50.300 195 379 1.2E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14800 b2a0e3bdf0664972367a4f1086f86e6e 735 Pfam PF00271 Helicase conserved C-terminal domain 491 586 9.4E-6 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS14800 b2a0e3bdf0664972367a4f1086f86e6e 735 SMART SM00487 193 390 7.5E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS01065 257a80730db9c0b3c47cdda11577a8e8 249 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 14 248 38.924 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 R615_RS01065 257a80730db9c0b3c47cdda11577a8e8 249 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 23 248 2.6E-84 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 R615_RS01065 257a80730db9c0b3c47cdda11577a8e8 249 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 156 170 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 R615_RS01065 257a80730db9c0b3c47cdda11577a8e8 249 Gene3D G3DSA:3.40.50.150 22 244 6.4E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS01065 257a80730db9c0b3c47cdda11577a8e8 249 PANTHER PTHR10108:SF864 1 248 9.6E-163 T 22-04-2016 R615_RS01065 257a80730db9c0b3c47cdda11577a8e8 249 Pfam PF01209 ubiE/COQ5 methyltransferase family 18 248 1.2E-102 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 R615_RS01065 257a80730db9c0b3c47cdda11577a8e8 249 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 34 49 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 R615_RS01065 257a80730db9c0b3c47cdda11577a8e8 249 SUPERFAMILY SSF53335 16 245 5.73E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS01065 257a80730db9c0b3c47cdda11577a8e8 249 PANTHER PTHR10108 1 248 9.6E-163 T 22-04-2016 R615_RS05935 880d932a11f8d06e166ed1a56829d7e5 307 Pfam PF01734 Patatin-like phospholipase 7 165 1.6E-14 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 R615_RS05935 880d932a11f8d06e166ed1a56829d7e5 307 Gene3D G3DSA:3.40.1090.10 77 166 6.0E-6 T 22-04-2016 R615_RS05935 880d932a11f8d06e166ed1a56829d7e5 307 PANTHER PTHR14226:SF24 2 296 4.8E-93 T 22-04-2016 R615_RS05935 880d932a11f8d06e166ed1a56829d7e5 307 PANTHER PTHR14226 2 296 4.8E-93 T 22-04-2016 R615_RS05935 880d932a11f8d06e166ed1a56829d7e5 307 SUPERFAMILY SSF52151 3 292 5.23E-53 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 SUPERFAMILY SSF52540 8 217 8.17E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 Pfam PF01926 50S ribosome-binding GTPase 8 122 6.4E-26 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 Hamap MF_00367 GTPase Era [era]. 3 293 37.025 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 PANTHER PTHR11649 3 296 1.1E-121 T 22-04-2016 R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 167 3.5E-34 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 Pfam PF07650 KH domain 206 281 6.7E-20 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 SUPERFAMILY SSF54814 179 294 4.97E-41 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 76 94 2.8E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 8 28 2.8E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 PANTHER PTHR11649:SF3 3 296 1.1E-121 T 22-04-2016 R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 Gene3D G3DSA:3.40.50.300 5 190 4.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 Gene3D G3DSA:3.30.300.20 191 290 3.0E-40 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta R615_RS12510 82f1b962da0daea3b737120e02e6cb64 296 TIGRFAM TIGR00436 era: GTP-binding protein Era 6 276 3.7E-99 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 4.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 4.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 Gene3D G3DSA:3.40.50.720 2 250 9.5E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 SUPERFAMILY SSF51735 4 250 3.94E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 PANTHER PTHR24322 10 194 6.2E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 6.2E-60 T 22-04-2016 R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS13560 907e6e087529e980b5b6fba60b014a90 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 1.6E-4 T 22-04-2016 R615_RS01050 daa237a844594d4e88f2931444119bcf 125 SUPERFAMILY SSF141734 2 120 1.27E-49 T 22-04-2016 R615_RS01050 daa237a844594d4e88f2931444119bcf 125 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 3 107 32.378 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 R615_RS01050 daa237a844594d4e88f2931444119bcf 125 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 103 1.0E-23 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 R615_RS01050 daa237a844594d4e88f2931444119bcf 125 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 29 103 2.6E-34 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 R615_RS01050 daa237a844594d4e88f2931444119bcf 125 PANTHER PTHR21256 3 125 2.6E-65 T 22-04-2016 R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 Gene3D G3DSA:3.30.565.10 7 243 4.8E-83 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 630 31.927 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 PANTHER PTHR11528:SF44 5 633 0.0 T 22-04-2016 R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 SUPERFAMILY SSF110942 517 630 4.05E-32 T 22-04-2016 R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 PANTHER PTHR11528 5 633 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 PRINTS PR00775 90kDa heat shock protein signature 192 210 1.7E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 PRINTS PR00775 90kDa heat shock protein signature 7 27 1.7E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 PRINTS PR00775 90kDa heat shock protein signature 77 94 1.7E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 PRINTS PR00775 90kDa heat shock protein signature 174 191 1.7E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 PRINTS PR00775 90kDa heat shock protein signature 28 50 1.7E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 PRINTS PR00775 90kDa heat shock protein signature 122 144 1.7E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 PRINTS PR00775 90kDa heat shock protein signature 95 112 1.7E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 184 2.1E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 SUPERFAMILY SSF55874 7 214 7.47E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 Pfam PF00183 Hsp90 protein 228 630 4.0E-127 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 SUPERFAMILY SSF54211 236 491 1.06E-95 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 SMART SM00387 29 186 7.8E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS07035 b86b9a0e85573204f2a50c34313b065d 634 PIRSF PIRSF002583 2 634 1.9E-215 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 78 9.8E-21 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 255 331 8.5E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 169 243 2.5E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 159 336 2.7E-56 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 SUPERFAMILY SSF46626 163 250 5.08E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 SUPERFAMILY SSF46626 56 79 5.08E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 SUPERFAMILY SSF46626 252 335 1.05E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 PANTHER PTHR33751:SF1 26 80 8.5E-84 T 22-04-2016 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 PANTHER PTHR33751:SF1 133 336 8.5E-84 T 22-04-2016 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 PIRSF PIRSF000006 2 337 5.2E-87 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 Gene3D G3DSA:1.10.760.10 254 336 3.0E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 Gene3D G3DSA:1.10.760.10 168 250 8.0E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 PANTHER PTHR33751 26 80 8.5E-84 T 22-04-2016 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 PANTHER PTHR33751 133 336 8.5E-84 T 22-04-2016 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 PRINTS PR00605 Class IC cytochrome C signature 179 190 3.1E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 R615_RS07560 25ca30092be726093b23e2e7f15420aa 337 PRINTS PR00605 Class IC cytochrome C signature 221 243 3.1E-6 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SUPERFAMILY SSF55785 320 441 9.18E-19 T 22-04-2016 IPR000014 PAS domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Pfam PF00512 His Kinase A (phospho-acceptor) domain 757 822 6.4E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SUPERFAMILY SSF55785 628 735 1.52E-13 T 22-04-2016 IPR000014 PAS domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SMART SM00448 1143 1258 4.9E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SMART SM00448 999 1119 1.7E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Pfam PF03924 CHASE domain 66 251 5.3E-37 T 22-04-2016 IPR006189 CHASE domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 910 924 1.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 928 938 1.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 969 982 1.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 945 963 1.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Gene3D G3DSA:1.20.120.160 1287 1393 5.3E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Gene3D G3DSA:3.30.450.20 597 750 1.5E-22 T 22-04-2016 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Gene3D G3DSA:3.30.565.10 823 986 1.6E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Pfam PF00072 Response regulator receiver domain 1001 1119 2.0E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Pfam PF00072 Response regulator receiver domain 1146 1258 2.5E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SMART SM00388 757 822 8.5E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SUPERFAMILY SSF55874 811 983 3.8E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SMART SM00086 405 447 24.0 T 22-04-2016 IPR001610 PAC motif R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SMART SM00086 565 607 1.7E-7 T 22-04-2016 IPR001610 PAC motif R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SMART SM00086 695 737 7.6E-5 T 22-04-2016 IPR001610 PAC motif R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Pfam PF13426 PAS domain 491 606 4.3E-13 T 22-04-2016 IPR000014 PAS domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Pfam PF08447 PAS fold 642 731 4.5E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SUPERFAMILY SSF52172 1140 1258 8.25E-35 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SUPERFAMILY SSF52172 999 1126 1.01E-21 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SUPERFAMILY SSF47384 743 823 1.12E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 PANTHER PTHR24423:SF486 695 988 2.6E-177 T 22-04-2016 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 PANTHER PTHR24423:SF486 10 551 2.6E-177 T 22-04-2016 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 PANTHER PTHR24423:SF486 1124 1314 2.6E-177 T 22-04-2016 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Pfam PF00989 PAS fold 332 444 3.6E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 PANTHER PTHR24423 695 988 2.6E-177 T 22-04-2016 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 PANTHER PTHR24423 10 551 2.6E-177 T 22-04-2016 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 PANTHER PTHR24423 1124 1314 2.6E-177 T 22-04-2016 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SMART SM01079 63 253 1.1E-52 T 22-04-2016 IPR006189 CHASE domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 481 614 8.1E-16 T 22-04-2016 IPR000014 PAS domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 329 453 5.4E-20 T 22-04-2016 IPR000014 PAS domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Gene3D G3DSA:3.40.50.2300 999 1127 9.3E-23 T 22-04-2016 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Gene3D G3DSA:3.40.50.2300 1141 1262 1.0E-35 T 22-04-2016 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SUPERFAMILY SSF47226 1288 1395 5.5E-14 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SMART SM00091 331 396 8.7E-10 T 22-04-2016 IPR000014 PAS domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SMART SM00091 477 546 1.3E-5 T 22-04-2016 IPR000014 PAS domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SMART SM00091 619 689 47.0 T 22-04-2016 IPR000014 PAS domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SMART SM00387 869 985 3.1E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Pfam PF01627 Hpt domain 1302 1381 1.1E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Gene3D G3DSA:1.10.287.130 751 818 1.8E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 SUPERFAMILY SSF55785 487 607 2.74E-17 T 22-04-2016 IPR000014 PAS domain R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Gene3D G3DSA:3.30.450.20 326 445 6.7E-20 T 22-04-2016 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Gene3D G3DSA:3.30.450.20 470 596 3.0E-21 T 22-04-2016 R615_RS07890 0aa6ebb3ea0f0fe454cd2f7c6829a973 1398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 869 983 6.2E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS09070 5f4f87bb425397be95ac998a1649ee07 346 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 28 213 2.7E-63 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS09070 5f4f87bb425397be95ac998a1649ee07 346 Gene3D G3DSA:3.40.50.300 18 178 1.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09070 5f4f87bb425397be95ac998a1649ee07 346 Pfam PF13177 DNA polymerase III, delta subunit 21 178 1.3E-47 T 22-04-2016 R615_RS09070 5f4f87bb425397be95ac998a1649ee07 346 SUPERFAMILY SSF52540 18 216 2.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09070 5f4f87bb425397be95ac998a1649ee07 346 PANTHER PTHR11669 21 217 9.7E-60 T 22-04-2016 R615_RS09070 5f4f87bb425397be95ac998a1649ee07 346 PANTHER PTHR11669:SF8 21 217 9.7E-60 T 22-04-2016 R615_RS02375 f8a14da1d52c1909397cbceb5e4a07e1 285 PANTHER PTHR10067 8 285 3.1E-104 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 R615_RS02375 f8a14da1d52c1909397cbceb5e4a07e1 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 50 282 4.8E-74 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 R615_RS02375 f8a14da1d52c1909397cbceb5e4a07e1 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 11 284 45.781 T 22-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 R615_RS02375 f8a14da1d52c1909397cbceb5e4a07e1 285 Pfam PF02666 Phosphatidylserine decarboxylase 64 281 1.2E-59 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 R615_RS00015 ca2b38522d18f6dbced64e5b1c0dbc22 360 PANTHER PTHR32182 1 356 2.7E-48 T 22-04-2016 R615_RS00015 ca2b38522d18f6dbced64e5b1c0dbc22 360 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 350 8.9E-25 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal R615_RS00015 ca2b38522d18f6dbced64e5b1c0dbc22 360 PANTHER PTHR32182:SF0 1 356 2.7E-48 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 R615_RS00015 ca2b38522d18f6dbced64e5b1c0dbc22 360 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 354 1.0E-98 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 R615_RS00015 ca2b38522d18f6dbced64e5b1c0dbc22 360 SUPERFAMILY SSF52540 1 359 5.35E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00015 ca2b38522d18f6dbced64e5b1c0dbc22 360 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 R615_RS00015 ca2b38522d18f6dbced64e5b1c0dbc22 360 Gene3D G3DSA:3.40.50.300 230 340 1.2E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00015 ca2b38522d18f6dbced64e5b1c0dbc22 360 Gene3D G3DSA:3.40.50.300 1 172 1.2E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00015 ca2b38522d18f6dbced64e5b1c0dbc22 360 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 360 85.23 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 R615_RS00015 ca2b38522d18f6dbced64e5b1c0dbc22 360 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 R615_RS08525 fef5636a50f5734acc87bed014af900b 129 PANTHER PTHR34874:SF1 2 129 1.4E-30 T 22-04-2016 R615_RS08525 fef5636a50f5734acc87bed014af900b 129 PANTHER PTHR34874 2 129 1.4E-30 T 22-04-2016 R615_RS08525 fef5636a50f5734acc87bed014af900b 129 SUPERFAMILY SSF75169 1 129 3.53E-28 T 22-04-2016 IPR027396 DsrEFH-like R615_RS08525 fef5636a50f5734acc87bed014af900b 129 Gene3D G3DSA:3.40.1260.10 1 129 2.4E-22 T 22-04-2016 IPR027396 DsrEFH-like R615_RS08525 fef5636a50f5734acc87bed014af900b 129 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 129 2.9E-35 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 R615_RS08525 fef5636a50f5734acc87bed014af900b 129 Pfam PF02635 DsrE/DsrF-like family 4 129 8.3E-21 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein R615_RS08885 c8c5cbed21eb9488c81c88f081c46f58 134 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 6 128 4.9E-53 T 22-04-2016 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 R615_RS08885 c8c5cbed21eb9488c81c88f081c46f58 134 PANTHER PTHR30204 1 116 1.8E-29 T 22-04-2016 R615_RS08885 c8c5cbed21eb9488c81c88f081c46f58 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08885 c8c5cbed21eb9488c81c88f081c46f58 134 SUPERFAMILY SSF46955 6 128 2.97E-32 T 22-04-2016 IPR009061 Putative DNA-binding domain R615_RS08885 c8c5cbed21eb9488c81c88f081c46f58 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 7.9E-20 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08885 c8c5cbed21eb9488c81c88f081c46f58 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 7.9E-20 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08885 c8c5cbed21eb9488c81c88f081c46f58 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 7.9E-20 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08885 c8c5cbed21eb9488c81c88f081c46f58 134 Gene3D G3DSA:1.10.1660.10 3 59 5.6E-25 T 22-04-2016 R615_RS08885 c8c5cbed21eb9488c81c88f081c46f58 134 SMART SM00422 5 74 8.8E-26 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08885 c8c5cbed21eb9488c81c88f081c46f58 134 Gene3D G3DSA:1.10.1660.10 60 130 1.3E-26 T 22-04-2016 R615_RS08885 c8c5cbed21eb9488c81c88f081c46f58 134 Pfam PF13411 MerR HTH family regulatory protein 6 72 4.0E-19 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08885 c8c5cbed21eb9488c81c88f081c46f58 134 PANTHER PTHR30204:SF18 1 116 1.8E-29 T 22-04-2016 R615_RS09585 27a96e3ddad0c2eb30e8c6854505c589 687 PANTHER PTHR33490 11 676 2.8E-83 T 22-04-2016 R615_RS09585 27a96e3ddad0c2eb30e8c6854505c589 687 Pfam PF11992 Domain of unknown function (DUF3488) 13 331 1.4E-93 T 22-04-2016 IPR021878 Protein of unknown function DUF3488 R615_RS09585 27a96e3ddad0c2eb30e8c6854505c589 687 Pfam PF13559 Domain of unknown function (DUF4129) 593 664 1.4E-4 T 22-04-2016 IPR025403 Domain of unknown function DUF4129 R615_RS09585 27a96e3ddad0c2eb30e8c6854505c589 687 Pfam PF01841 Transglutaminase-like superfamily 361 477 1.9E-25 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS09585 27a96e3ddad0c2eb30e8c6854505c589 687 PANTHER PTHR33490:SF4 11 676 2.8E-83 T 22-04-2016 R615_RS09585 27a96e3ddad0c2eb30e8c6854505c589 687 SUPERFAMILY SSF54001 282 605 1.96E-58 T 22-04-2016 R615_RS09585 27a96e3ddad0c2eb30e8c6854505c589 687 SMART SM00460 408 479 3.5E-18 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS09585 27a96e3ddad0c2eb30e8c6854505c589 687 Gene3D G3DSA:3.90.260.10 344 606 5.3E-48 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS17440 3dcdb27a0c075751d354a97fccaae3b5 251 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 17 40 3.8E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17440 3dcdb27a0c075751d354a97fccaae3b5 251 SUPERFAMILY SSF54523 21 71 4.08E-5 T 22-04-2016 R615_RS17440 3dcdb27a0c075751d354a97fccaae3b5 251 SUPERFAMILY SSF54523 55 246 2.72E-26 T 22-04-2016 R615_RS17440 3dcdb27a0c075751d354a97fccaae3b5 251 PANTHER PTHR39583:SF1 154 244 4.9E-19 T 22-04-2016 R615_RS17440 3dcdb27a0c075751d354a97fccaae3b5 251 PANTHER PTHR39583:SF1 11 130 4.9E-19 T 22-04-2016 R615_RS17440 3dcdb27a0c075751d354a97fccaae3b5 251 PANTHER PTHR39583 154 244 4.9E-19 T 22-04-2016 R615_RS17440 3dcdb27a0c075751d354a97fccaae3b5 251 PANTHER PTHR39583 11 130 4.9E-19 T 22-04-2016 R615_RS17440 3dcdb27a0c075751d354a97fccaae3b5 251 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17440 3dcdb27a0c075751d354a97fccaae3b5 251 Gene3D G3DSA:3.10.610.10 54 181 7.6E-22 T 22-04-2016 R615_RS17440 3dcdb27a0c075751d354a97fccaae3b5 251 Pfam PF11612 Type II secretion system (T2SS), protein J 71 242 9.6E-28 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 R615_RS17440 3dcdb27a0c075751d354a97fccaae3b5 251 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 40 3.4E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17440 3dcdb27a0c075751d354a97fccaae3b5 251 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 19 131 6.4E-24 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 R615_RS13875 463513c7e12f81d1b684a3630586ca64 494 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 485 3.2E-170 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 R615_RS13875 463513c7e12f81d1b684a3630586ca64 494 PANTHER PTHR11236 1 490 3.7E-230 T 22-04-2016 R615_RS13875 463513c7e12f81d1b684a3630586ca64 494 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 169 1.8E-33 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 R615_RS13875 463513c7e12f81d1b684a3630586ca64 494 Gene3D G3DSA:3.60.120.10 13 489 4.8E-172 T 22-04-2016 IPR005801 ADC synthase GO:0009058 R615_RS13875 463513c7e12f81d1b684a3630586ca64 494 SUPERFAMILY SSF56322 14 485 2.88E-155 T 22-04-2016 IPR005801 ADC synthase GO:0009058 R615_RS13875 463513c7e12f81d1b684a3630586ca64 494 PANTHER PTHR11236:SF9 1 490 3.7E-230 T 22-04-2016 R615_RS13875 463513c7e12f81d1b684a3630586ca64 494 PRINTS PR00095 Anthranilate synthase component I signature 434 448 2.8E-26 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 R615_RS13875 463513c7e12f81d1b684a3630586ca64 494 PRINTS PR00095 Anthranilate synthase component I signature 325 338 2.8E-26 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 R615_RS13875 463513c7e12f81d1b684a3630586ca64 494 PRINTS PR00095 Anthranilate synthase component I signature 339 352 2.8E-26 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 R615_RS13875 463513c7e12f81d1b684a3630586ca64 494 PRINTS PR00095 Anthranilate synthase component I signature 419 433 2.8E-26 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 R615_RS13875 463513c7e12f81d1b684a3630586ca64 494 Pfam PF00425 chorismate binding enzyme 224 477 1.9E-95 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal R615_RS15635 3cc4ad0d28bac9afb3384eb801baeb06 278 PANTHER PTHR22911 1 278 1.1E-62 T 22-04-2016 R615_RS15635 3cc4ad0d28bac9afb3384eb801baeb06 278 SUPERFAMILY SSF103481 185 275 5.62E-10 T 22-04-2016 R615_RS15635 3cc4ad0d28bac9afb3384eb801baeb06 278 Pfam PF00892 EamA-like transporter family 1 127 6.0E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS15635 3cc4ad0d28bac9afb3384eb801baeb06 278 Pfam PF00892 EamA-like transporter family 143 273 2.9E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS15635 3cc4ad0d28bac9afb3384eb801baeb06 278 PANTHER PTHR22911:SF6 1 278 1.1E-62 T 22-04-2016 R615_RS15635 3cc4ad0d28bac9afb3384eb801baeb06 278 SUPERFAMILY SSF103481 33 131 2.22E-16 T 22-04-2016 R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 1129 1206 1.2E-14 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 PANTHER PTHR30435:SF1 1085 1206 9.6E-92 T 22-04-2016 R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 PANTHER PTHR30435:SF1 1 123 9.6E-92 T 22-04-2016 R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 Pfam PF00460 Flagella basal body rod protein 3 33 1.8E-6 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 Pfam PF07559 Flagellar basal body protein FlaE 932 1088 4.5E-28 T 22-04-2016 IPR011491 Flagellar hook protein FlgE R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 SUPERFAMILY SSF117143 1047 1168 7.32E-45 T 22-04-2016 R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 SUPERFAMILY SSF117143 930 1020 7.32E-45 T 22-04-2016 R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 SUPERFAMILY SSF117143 864 874 7.32E-45 T 22-04-2016 R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 PANTHER PTHR30435 1085 1206 9.6E-92 T 22-04-2016 R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 PANTHER PTHR30435 1 123 9.6E-92 T 22-04-2016 R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 SUPERFAMILY SSF117143 80 172 2.62E-20 T 22-04-2016 R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 SUPERFAMILY SSF117143 272 360 2.62E-20 T 22-04-2016 R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 317 2.1E-38 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G R615_RS04630 1660f56b66b8d374f74275c143ada236 1206 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 925 1189 1.2E-52 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G R615_RS01270 05e1414cb9f988fd9437dfeab98b0ec3 123 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 123 1.7E-58 T 22-04-2016 IPR010039 Capsule biosynthesis phosphatase R615_RS01270 05e1414cb9f988fd9437dfeab98b0ec3 123 SUPERFAMILY SSF56784 1 112 1.26E-21 T 22-04-2016 IPR023214 HAD-like domain R615_RS01270 05e1414cb9f988fd9437dfeab98b0ec3 123 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 2 109 2.3E-10 T 22-04-2016 IPR010033 HAD-superfamily phosphatase, subfamily IIIC R615_RS01270 05e1414cb9f988fd9437dfeab98b0ec3 123 Gene3D G3DSA:3.40.50.1000 1 118 1.1E-37 T 22-04-2016 IPR023214 HAD-like domain R615_RS13995 15a9ac0498c82123abfef6c03ba37676 226 PANTHER PTHR30329:SF4 11 225 1.3E-39 T 22-04-2016 R615_RS13995 15a9ac0498c82123abfef6c03ba37676 226 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 19 62 2.9E-14 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain R615_RS13995 15a9ac0498c82123abfef6c03ba37676 226 PANTHER PTHR30329 11 225 1.3E-39 T 22-04-2016 R615_RS13995 15a9ac0498c82123abfef6c03ba37676 226 Gene3D G3DSA:3.30.1330.60 90 223 6.5E-28 T 22-04-2016 IPR006665 OmpA-like domain R615_RS13995 15a9ac0498c82123abfef6c03ba37676 226 SUPERFAMILY SSF103088 100 223 1.7E-23 T 22-04-2016 IPR006665 OmpA-like domain R615_RS13995 15a9ac0498c82123abfef6c03ba37676 226 Pfam PF00691 OmpA family 112 207 5.1E-17 T 22-04-2016 IPR006665 OmpA-like domain R615_RS09235 787bdaa33e0fbac8e3f8819f0b757670 205 Gene3D G3DSA:3.90.1470.10 13 128 3.4E-45 T 22-04-2016 R615_RS09235 787bdaa33e0fbac8e3f8819f0b757670 205 Gene3D G3DSA:3.40.50.1000 131 174 2.5E-6 T 22-04-2016 IPR023214 HAD-like domain R615_RS09235 787bdaa33e0fbac8e3f8819f0b757670 205 SUPERFAMILY SSF56784 2 190 9.22E-44 T 22-04-2016 IPR023214 HAD-like domain R615_RS09235 787bdaa33e0fbac8e3f8819f0b757670 205 TIGRFAM TIGR02137 HSK-PSP: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein 1 203 3.4E-111 T 22-04-2016 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 R615_RS09235 787bdaa33e0fbac8e3f8819f0b757670 205 Pfam PF00702 haloacid dehalogenase-like hydrolase 65 164 3.7E-10 T 22-04-2016 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 PANTHER PTHR10283 1 213 4.2E-115 T 22-04-2016 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 PANTHER PTHR10283 294 310 4.2E-115 T 22-04-2016 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 PANTHER PTHR10283 351 587 4.2E-115 T 22-04-2016 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 PANTHER PTHR10283:SF79 1 213 4.2E-115 T 22-04-2016 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 PANTHER PTHR10283:SF79 294 310 4.2E-115 T 22-04-2016 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 PANTHER PTHR10283:SF79 351 587 4.2E-115 T 22-04-2016 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 Gene3D G3DSA:3.30.70.1450 310 384 1.2E-17 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 Gene3D G3DSA:3.30.70.1450 218 291 2.5E-15 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 Pfam PF03600 Citrate transporter 19 537 6.4E-44 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 537 553 - T 22-04-2016 IPR031312 Sodium/sulphate symporter, conserved site R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 Pfam PF02080 TrkA-C domain 220 287 1.3E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 Pfam PF02080 TrkA-C domain 310 369 2.9E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 SUPERFAMILY SSF116726 306 382 1.96E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 R615_RS01015 ac191858edd81bda679ca3699c49e0f6 590 SUPERFAMILY SSF116726 208 290 2.62E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 367 1.7E-179 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 231 1.5E-41 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 SUPERFAMILY SSF55973 112 232 9.03E-49 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 Gene3D G3DSA:3.30.300.10 137 233 1.2E-40 T 22-04-2016 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 SUPERFAMILY SSF55973 233 401 3.49E-64 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 SUPERFAMILY SSF55973 6 110 2.47E-44 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 Gene3D G3DSA:3.30.300.10 244 401 9.4E-69 T 22-04-2016 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 101 4.5E-40 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 Gene3D G3DSA:3.30.300.10 12 136 1.2E-46 T 22-04-2016 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 366 8.3E-66 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 PANTHER PTHR11964 386 399 8.9E-262 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 PANTHER PTHR11964 7 367 8.9E-262 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 401 55.843 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS01310 64ec2ffa14f1b4a1a20d41086ba810a7 403 PIRSF PIRSF000497 1 402 4.2E-167 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 R615_RS04400 81669ba60fb1d224de5e7cebcb41bf65 251 SUPERFAMILY SSF75217 2 245 3.07E-102 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases R615_RS04400 81669ba60fb1d224de5e7cebcb41bf65 251 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 251 115.484 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 R615_RS04400 81669ba60fb1d224de5e7cebcb41bf65 251 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 2.0E-105 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 R615_RS04400 81669ba60fb1d224de5e7cebcb41bf65 251 Gene3D G3DSA:3.40.1280.10 3 160 8.3E-66 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal R615_RS04400 81669ba60fb1d224de5e7cebcb41bf65 251 PIRSF PIRSF000386 1 248 6.8E-102 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 R615_RS04400 81669ba60fb1d224de5e7cebcb41bf65 251 PANTHER PTHR32125 2 228 2.1E-119 T 22-04-2016 R615_RS04400 81669ba60fb1d224de5e7cebcb41bf65 251 Gene3D G3DSA:1.10.1270.20 161 243 4.0E-37 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 R615_RS04400 81669ba60fb1d224de5e7cebcb41bf65 251 PANTHER PTHR32125:SF1 2 228 2.1E-119 T 22-04-2016 R615_RS04400 81669ba60fb1d224de5e7cebcb41bf65 251 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 2.4E-67 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 R615_RS12705 6089ccca2ef6aa5c7758850358f7cf9c 747 PANTHER PTHR32552 44 747 2.9E-19 T 22-04-2016 R615_RS12705 6089ccca2ef6aa5c7758850358f7cf9c 747 Gene3D G3DSA:2.170.130.10 42 154 2.2E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS12705 6089ccca2ef6aa5c7758850358f7cf9c 747 Gene3D G3DSA:2.40.170.20 155 747 1.7E-79 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS12705 6089ccca2ef6aa5c7758850358f7cf9c 747 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 730 747 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site R615_RS12705 6089ccca2ef6aa5c7758850358f7cf9c 747 Pfam PF00593 TonB dependent receptor 491 744 8.1E-28 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS12705 6089ccca2ef6aa5c7758850358f7cf9c 747 SUPERFAMILY SSF56935 24 747 1.1E-73 T 22-04-2016 R615_RS13500 864e1587731b5b288575e06d3228338a 97 SUPERFAMILY SSF50129 1 96 1.29E-33 T 22-04-2016 IPR011032 GroES-like R615_RS13500 864e1587731b5b288575e06d3228338a 97 PRINTS PR00297 10kDa chaperonin signature 3 18 5.8E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 R615_RS13500 864e1587731b5b288575e06d3228338a 97 PRINTS PR00297 10kDa chaperonin signature 25 46 5.8E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 R615_RS13500 864e1587731b5b288575e06d3228338a 97 PRINTS PR00297 10kDa chaperonin signature 60 72 5.8E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 R615_RS13500 864e1587731b5b288575e06d3228338a 97 PRINTS PR00297 10kDa chaperonin signature 82 95 5.8E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 R615_RS13500 864e1587731b5b288575e06d3228338a 97 Gene3D G3DSA:2.30.33.40 1 96 3.4E-35 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 R615_RS13500 864e1587731b5b288575e06d3228338a 97 SMART SM00883 2 95 1.8E-54 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 R615_RS13500 864e1587731b5b288575e06d3228338a 97 PANTHER PTHR10772 1 96 3.1E-40 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 R615_RS13500 864e1587731b5b288575e06d3228338a 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 R615_RS13500 864e1587731b5b288575e06d3228338a 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 26.143 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 R615_RS13500 864e1587731b5b288575e06d3228338a 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.4E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 R615_RS03760 6e92733712aa5ca9ccfc956ee1e95b3f 422 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 13 118 2.0E-9 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 R615_RS03760 6e92733712aa5ca9ccfc956ee1e95b3f 422 Pfam PF07805 HipA-like N-terminal domain 153 244 2.2E-17 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 R615_RS03760 6e92733712aa5ca9ccfc956ee1e95b3f 422 PANTHER PTHR37419 153 337 8.4E-16 T 22-04-2016 R615_RS03760 6e92733712aa5ca9ccfc956ee1e95b3f 422 Pfam PF13657 HipA N-terminal domain 13 119 1.8E-16 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 R615_RS03760 6e92733712aa5ca9ccfc956ee1e95b3f 422 Gene3D G3DSA:1.10.238.10 227 294 9.9E-4 T 22-04-2016 IPR011992 EF-hand domain pair R615_RS03760 6e92733712aa5ca9ccfc956ee1e95b3f 422 PANTHER PTHR37419:SF1 153 337 8.4E-16 T 22-04-2016 R615_RS03760 6e92733712aa5ca9ccfc956ee1e95b3f 422 Pfam PF07804 HipA-like C-terminal domain 249 395 8.2E-33 T 22-04-2016 IPR012893 HipA-like, C-terminal R615_RS16010 d11bb55906bb5f67c66adbfb5df79eea 716 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 159 7.5E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS16010 d11bb55906bb5f67c66adbfb5df79eea 716 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 699 716 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site R615_RS16010 d11bb55906bb5f67c66adbfb5df79eea 716 SUPERFAMILY SSF56935 35 218 3.83E-88 T 22-04-2016 R615_RS16010 d11bb55906bb5f67c66adbfb5df79eea 716 SUPERFAMILY SSF56935 246 716 3.83E-88 T 22-04-2016 R615_RS16010 d11bb55906bb5f67c66adbfb5df79eea 716 PANTHER PTHR32552 17 716 5.7E-34 T 22-04-2016 R615_RS16010 d11bb55906bb5f67c66adbfb5df79eea 716 Gene3D G3DSA:2.40.170.20 163 716 3.5E-57 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS16010 d11bb55906bb5f67c66adbfb5df79eea 716 Gene3D G3DSA:2.170.130.10 33 162 5.5E-32 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS16010 d11bb55906bb5f67c66adbfb5df79eea 716 Pfam PF00593 TonB dependent receptor 468 712 6.1E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS10390 7fb7533b4d77c86e72fc69cc21a24e63 268 SUPERFAMILY SSF53098 105 264 3.64E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS10390 7fb7533b4d77c86e72fc69cc21a24e63 268 Gene3D G3DSA:3.30.420.10 106 261 2.5E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS10390 7fb7533b4d77c86e72fc69cc21a24e63 268 Pfam PF13276 HTH-like domain 26 81 8.0E-19 T 22-04-2016 IPR025948 HTH-like domain R615_RS10390 7fb7533b4d77c86e72fc69cc21a24e63 268 Pfam PF00665 Integrase core domain 108 221 1.3E-29 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 R615_RS10390 7fb7533b4d77c86e72fc69cc21a24e63 268 PANTHER PTHR32552 1 268 6.9E-53 T 22-04-2016 R615_RS07145 6871c239a7300bd86fd5302d7bff5d0f 262 SUPERFAMILY SSF53955 31 179 3.8E-42 T 22-04-2016 IPR023346 Lysozyme-like domain R615_RS07145 6871c239a7300bd86fd5302d7bff5d0f 262 PANTHER PTHR34408 38 182 5.7E-29 T 22-04-2016 R615_RS07145 6871c239a7300bd86fd5302d7bff5d0f 262 Pfam PF00182 Chitinase class I 43 142 1.6E-9 T 22-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 R615_RS07145 6871c239a7300bd86fd5302d7bff5d0f 262 Gene3D G3DSA:3.30.20.10 88 124 1.4E-11 T 22-04-2016 R615_RS07145 6871c239a7300bd86fd5302d7bff5d0f 262 SUPERFAMILY SSF47090 197 260 3.14E-18 T 22-04-2016 IPR002477 Peptidoglycan binding-like R615_RS07145 6871c239a7300bd86fd5302d7bff5d0f 262 Pfam PF01471 Putative peptidoglycan binding domain 206 260 9.5E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like R615_RS07145 6871c239a7300bd86fd5302d7bff5d0f 262 Gene3D G3DSA:1.10.101.10 198 261 2.4E-21 T 22-04-2016 IPR002477 Peptidoglycan binding-like R615_RS07145 6871c239a7300bd86fd5302d7bff5d0f 262 Gene3D G3DSA:1.10.530.10 43 63 3.1E-4 T 22-04-2016 R615_RS07145 6871c239a7300bd86fd5302d7bff5d0f 262 Gene3D G3DSA:1.10.530.10 125 164 3.1E-4 T 22-04-2016 R615_RS07145 6871c239a7300bd86fd5302d7bff5d0f 262 PANTHER PTHR34408:SF1 38 182 5.7E-29 T 22-04-2016 R615_RS03370 79d6596ffb8ca891b3d6bf8345c9e4ea 296 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 295 30.97 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 R615_RS03370 79d6596ffb8ca891b3d6bf8345c9e4ea 296 SUPERFAMILY SSF53335 48 294 8.29E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03370 79d6596ffb8ca891b3d6bf8345c9e4ea 296 Gene3D G3DSA:3.40.50.150 101 290 9.1E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03370 79d6596ffb8ca891b3d6bf8345c9e4ea 296 PANTHER PTHR18895 16 295 4.0E-123 T 22-04-2016 R615_RS03370 79d6596ffb8ca891b3d6bf8345c9e4ea 296 PIRSF PIRSF000401 1 296 1.2E-85 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 R615_RS03370 79d6596ffb8ca891b3d6bf8345c9e4ea 296 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 294 1.9E-91 T 22-04-2016 R615_RS03370 79d6596ffb8ca891b3d6bf8345c9e4ea 296 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 289 4.0E-87 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 R615_RS03370 79d6596ffb8ca891b3d6bf8345c9e4ea 296 PANTHER PTHR18895:SF69 16 295 4.0E-123 T 22-04-2016 R615_RS06525 31eb0a9835dcb24d2c9fcec9725de3a3 370 Gene3D G3DSA:3.20.20.80 84 258 9.7E-13 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 R615_RS06525 31eb0a9835dcb24d2c9fcec9725de3a3 370 SUPERFAMILY SSF51445 83 266 2.11E-13 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily R615_RS06525 31eb0a9835dcb24d2c9fcec9725de3a3 370 Pfam PF02449 Beta-galactosidase 85 215 8.5E-9 T 22-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 R615_RS10670 00be15e57e84377b659e04c14005221c 141 PANTHER PTHR37805 1 141 1.8E-43 T 22-04-2016 R615_RS10670 00be15e57e84377b659e04c14005221c 141 Pfam PF07308 Protein of unknown function (DUF1456) 73 139 8.9E-23 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 R615_RS10670 00be15e57e84377b659e04c14005221c 141 Pfam PF07308 Protein of unknown function (DUF1456) 1 58 3.7E-17 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 R615_RS10670 00be15e57e84377b659e04c14005221c 141 PANTHER PTHR37805:SF1 1 141 1.8E-43 T 22-04-2016 R615_RS12405 dbe74dc54b9ded97f21e500b528e9f6a 160 PANTHER PTHR33221 2 152 5.2E-64 T 22-04-2016 R615_RS12405 dbe74dc54b9ded97f21e500b528e9f6a 160 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 1.5E-63 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 R615_RS12405 dbe74dc54b9ded97f21e500b528e9f6a 160 PANTHER PTHR33221:SF1 2 152 5.2E-64 T 22-04-2016 R615_RS12405 dbe74dc54b9ded97f21e500b528e9f6a 160 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site R615_RS12405 dbe74dc54b9ded97f21e500b528e9f6a 160 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.0E-45 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type R615_RS12405 dbe74dc54b9ded97f21e500b528e9f6a 160 Gene3D G3DSA:1.10.10.10 1 136 2.4E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS12405 dbe74dc54b9ded97f21e500b528e9f6a 160 SUPERFAMILY SSF46785 2 133 1.26E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS12405 dbe74dc54b9ded97f21e500b528e9f6a 160 Pfam PF02082 Transcriptional regulator 1 83 1.3E-28 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type R615_RS11605 69944d87215ec07e410089480bbdf4db 348 SUPERFAMILY SSF46689 289 342 6.27E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS11605 69944d87215ec07e410089480bbdf4db 348 PANTHER PTHR11019 210 344 8.4E-18 T 22-04-2016 R615_RS11605 69944d87215ec07e410089480bbdf4db 348 Pfam PF12833 Helix-turn-helix domain 261 337 4.6E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS11605 69944d87215ec07e410089480bbdf4db 348 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 40 208 1.5E-20 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS11605 69944d87215ec07e410089480bbdf4db 348 PANTHER PTHR11019:SF52 210 344 8.4E-18 T 22-04-2016 R615_RS11605 69944d87215ec07e410089480bbdf4db 348 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 290 332 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 R615_RS11605 69944d87215ec07e410089480bbdf4db 348 SMART SM00342 254 336 1.0E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS11605 69944d87215ec07e410089480bbdf4db 348 Gene3D G3DSA:1.10.10.60 288 342 9.1E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS02475 ba55d6337b8737d7e62c17a7ad430dbb 430 SMART SM00788 4 423 8.5E-283 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 R615_RS02475 ba55d6337b8737d7e62c17a7ad430dbb 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 R615_RS02475 ba55d6337b8737d7e62c17a7ad430dbb 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 428 1.1E-180 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 R615_RS02475 ba55d6337b8737d7e62c17a7ad430dbb 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 R615_RS02475 ba55d6337b8737d7e62c17a7ad430dbb 430 Gene3D G3DSA:1.10.300.10 103 194 1.8E-35 T 22-04-2016 R615_RS02475 ba55d6337b8737d7e62c17a7ad430dbb 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 204.613 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 R615_RS02475 ba55d6337b8737d7e62c17a7ad430dbb 430 Pfam PF00709 Adenylosuccinate synthetase 5 422 5.7E-174 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 R615_RS02475 ba55d6337b8737d7e62c17a7ad430dbb 430 Gene3D G3DSA:3.90.170.10 266 424 4.3E-66 T 22-04-2016 R615_RS02475 ba55d6337b8737d7e62c17a7ad430dbb 430 SUPERFAMILY SSF52540 3 428 4.25E-171 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02475 ba55d6337b8737d7e62c17a7ad430dbb 430 PANTHER PTHR11846 1 427 2.1E-237 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 R615_RS02475 ba55d6337b8737d7e62c17a7ad430dbb 430 Gene3D G3DSA:3.40.440.10 3 94 4.8E-70 T 22-04-2016 R615_RS02475 ba55d6337b8737d7e62c17a7ad430dbb 430 Gene3D G3DSA:3.40.440.10 195 265 4.8E-70 T 22-04-2016 R615_RS14295 6355241676695265259751eb892aaa33 214 SMART SM00267 17 190 4.8E-59 T 22-04-2016 IPR000160 GGDEF domain R615_RS14295 6355241676695265259751eb892aaa33 214 Pfam PF00990 Diguanylate cyclase, GGDEF domain 29 186 6.5E-49 T 22-04-2016 IPR000160 GGDEF domain R615_RS14295 6355241676695265259751eb892aaa33 214 PANTHER PTHR10799:SF774 17 186 2.6E-26 T 22-04-2016 R615_RS14295 6355241676695265259751eb892aaa33 214 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 25 189 6.0E-55 T 22-04-2016 IPR000160 GGDEF domain R615_RS14295 6355241676695265259751eb892aaa33 214 SUPERFAMILY SSF55073 33 190 9.42E-50 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS14295 6355241676695265259751eb892aaa33 214 PANTHER PTHR10799 17 186 2.6E-26 T 22-04-2016 R615_RS14295 6355241676695265259751eb892aaa33 214 Gene3D G3DSA:3.30.70.270 30 192 2.6E-57 T 22-04-2016 R615_RS02390 7d37615f28fd477a523c1d89d18dece1 283 PANTHER PTHR30433:SF4 1 283 1.6E-129 T 22-04-2016 IPR022522 Flagellar motor stator, MotA R615_RS02390 7d37615f28fd477a523c1d89d18dece1 283 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site R615_RS02390 7d37615f28fd477a523c1d89d18dece1 283 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 239 1.1E-9 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 R615_RS02390 7d37615f28fd477a523c1d89d18dece1 283 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 2.3E-111 T 22-04-2016 IPR022522 Flagellar motor stator, MotA R615_RS02390 7d37615f28fd477a523c1d89d18dece1 283 PANTHER PTHR30433 1 283 1.6E-129 T 22-04-2016 R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 Gene3D G3DSA:3.30.450.20 123 248 9.2E-11 T 22-04-2016 R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 Gene3D G3DSA:3.30.70.270 379 539 5.6E-54 T 22-04-2016 R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 PANTHER PTHR33121 498 797 2.7E-77 T 22-04-2016 R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 PANTHER PTHR33121 355 360 2.7E-77 T 22-04-2016 R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 Pfam PF13426 PAS domain 264 365 9.3E-12 T 22-04-2016 IPR000014 PAS domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 373 3.7E-15 T 22-04-2016 IPR000014 PAS domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 SUPERFAMILY SSF55785 264 374 5.8E-19 T 22-04-2016 IPR000014 PAS domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 Pfam PF00563 EAL domain 554 787 6.2E-77 T 22-04-2016 IPR001633 EAL domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 PANTHER PTHR33121:SF13 498 797 2.7E-77 T 22-04-2016 R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 PANTHER PTHR33121:SF13 355 360 2.7E-77 T 22-04-2016 R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 Gene3D G3DSA:3.20.20.450 551 799 1.7E-94 T 22-04-2016 IPR001633 EAL domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 SMART SM00267 366 538 1.7E-66 T 22-04-2016 IPR000160 GGDEF domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 SUPERFAMILY SSF55073 382 539 7.72E-48 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 SMART SM00448 4 116 2.8E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 Pfam PF00072 Response regulator receiver domain 6 116 2.7E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 536 2.1E-45 T 22-04-2016 IPR000160 GGDEF domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 SMART SM00052 548 793 5.2E-111 T 22-04-2016 IPR001633 EAL domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 SMART SM00086 324 366 0.17 T 22-04-2016 IPR001610 PAC motif R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 SMART SM00086 203 245 9.5 T 22-04-2016 IPR001610 PAC motif R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 Gene3D G3DSA:3.40.50.2300 2 122 2.1E-29 T 22-04-2016 R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 Pfam PF00990 Diguanylate cyclase, GGDEF domain 377 534 7.8E-47 T 22-04-2016 IPR000160 GGDEF domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 Gene3D G3DSA:3.30.450.20 249 358 2.8E-18 T 22-04-2016 R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 SUPERFAMILY SSF141868 553 800 3.53E-88 T 22-04-2016 IPR001633 EAL domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 SUPERFAMILY SSF55785 122 242 9.6E-8 T 22-04-2016 IPR000014 PAS domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 SMART SM00091 134 201 3.5 T 22-04-2016 IPR000014 PAS domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 SMART SM00091 253 320 2.4E-7 T 22-04-2016 IPR000014 PAS domain R615_RS07630 48829345e5efd6d295833bd9f47ab2c0 805 SUPERFAMILY SSF52172 1 148 1.29E-29 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 Pfam PF00551 Formyl transferase 88 263 3.3E-39 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 PIRSF PIRSF036480 2 283 1.8E-117 T 22-04-2016 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 6.3E-60 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 6.3E-60 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 6.3E-60 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 6.3E-60 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 6.3E-60 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 6.3E-60 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 Gene3D G3DSA:3.40.50.170 89 283 1.5E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 Gene3D G3DSA:3.30.70.260 2 83 2.3E-21 T 22-04-2016 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 Pfam PF01842 ACT domain 5 66 8.7E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 PANTHER PTHR10520:SF7 2 277 4.2E-142 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 283 48.103 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 SUPERFAMILY SSF55021 5 84 4.04E-16 T 22-04-2016 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 283 3.8E-112 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 PANTHER PTHR10520 2 277 4.2E-142 T 22-04-2016 R615_RS13960 b2770a78532faa8451e87c8ac76513da 283 SUPERFAMILY SSF53328 88 283 1.31E-60 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 Gene3D G3DSA:3.40.50.20 8 88 7.4E-28 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 Gene3D G3DSA:3.30.1490.20 110 177 1.2E-17 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 PANTHER PTHR23132 8 305 3.2E-87 T 22-04-2016 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 67 78 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 SUPERFAMILY SSF52440 8 100 4.41E-30 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 Pfam PF01820 D-ala D-ala ligase N-terminus 8 90 2.5E-22 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 245 273 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 SUPERFAMILY SSF56059 100 305 6.7E-52 T 22-04-2016 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 PANTHER PTHR23132:SF0 8 305 3.2E-87 T 22-04-2016 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 Gene3D G3DSA:3.30.470.20 178 302 1.1E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 Gene3D G3DSA:3.30.470.20 89 107 1.1E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 PIRSF PIRSF039102 48 307 3.8E-85 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 7 303 33.813 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 Pfam PF07478 D-ala D-ala ligase C-terminus 110 300 1.6E-55 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS13105 2d5130e04bf12d50aa1a28255d5a6601 308 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 8 302 5.4E-99 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS15330 62981d87c95cf82ef05bcf64b6d4b139 182 Pfam PF13302 Acetyltransferase (GNAT) domain 15 148 3.3E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS15330 62981d87c95cf82ef05bcf64b6d4b139 182 SUPERFAMILY SSF55729 5 173 5.04E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS15330 62981d87c95cf82ef05bcf64b6d4b139 182 Gene3D G3DSA:3.40.630.30 8 174 4.4E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS17690 7c3780fb3cd745c1146f579aa74eaf6e 301 Gene3D G3DSA:1.10.3850.10 82 295 3.5E-52 T 22-04-2016 R615_RS17690 7c3780fb3cd745c1146f579aa74eaf6e 301 PANTHER PTHR32063 11 296 3.0E-74 T 22-04-2016 R615_RS17690 7c3780fb3cd745c1146f579aa74eaf6e 301 Pfam PF00873 AcrB/AcrD/AcrF family 22 291 1.2E-48 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS17690 7c3780fb3cd745c1146f579aa74eaf6e 301 Gene3D G3DSA:3.30.2090.10 11 74 2.3E-6 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS17690 7c3780fb3cd745c1146f579aa74eaf6e 301 SUPERFAMILY SSF82866 77 295 3.79E-44 T 22-04-2016 R615_RS17690 7c3780fb3cd745c1146f579aa74eaf6e 301 PANTHER PTHR32063:SF18 11 296 3.0E-74 T 22-04-2016 R615_RS17690 7c3780fb3cd745c1146f579aa74eaf6e 301 SUPERFAMILY SSF82714 11 74 1.23E-6 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS17690 7c3780fb3cd745c1146f579aa74eaf6e 301 PRINTS PR00702 Acriflavin resistance protein family signature 137 160 3.3E-10 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS17690 7c3780fb3cd745c1146f579aa74eaf6e 301 PRINTS PR00702 Acriflavin resistance protein family signature 164 185 3.3E-10 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS17690 7c3780fb3cd745c1146f579aa74eaf6e 301 PRINTS PR00702 Acriflavin resistance protein family signature 192 216 3.3E-10 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS17690 7c3780fb3cd745c1146f579aa74eaf6e 301 PRINTS PR00702 Acriflavin resistance protein family signature 267 290 3.3E-10 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 246 259 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 PANTHER PTHR10277 12 565 8.5E-238 T 22-04-2016 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 SUPERFAMILY SSF51569 25 333 1.59E-96 T 22-04-2016 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 11 559 49.806 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 SUPERFAMILY SSF110921 459 556 1.31E-21 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 12 556 2.4E-210 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 SMART SM00917 425 558 1.8E-17 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 Pfam PF00682 HMGL-like 37 315 2.4E-73 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 Gene3D G3DSA:3.20.20.70 14 397 1.1E-139 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 43 59 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 Pfam PF08502 LeuA allosteric (dimerisation) domain 425 556 3.8E-21 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 PANTHER PTHR10277:SF28 12 565 8.5E-238 T 22-04-2016 R615_RS04260 0bfa5a7e842c094fa0867f98076681ea 565 SUPERFAMILY SSF89000 392 440 6.28E-12 T 22-04-2016 R615_RS02045 7f2dfd913417d8aa682eebd73bfa2d8c 262 PANTHER PTHR23088:SF27 4 261 2.9E-103 T 22-04-2016 R615_RS02045 7f2dfd913417d8aa682eebd73bfa2d8c 262 Gene3D G3DSA:3.60.110.10 3 261 1.0E-82 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS02045 7f2dfd913417d8aa682eebd73bfa2d8c 262 Pfam PF00795 Carbon-nitrogen hydrolase 4 254 2.2E-55 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS02045 7f2dfd913417d8aa682eebd73bfa2d8c 262 PANTHER PTHR23088 4 261 2.9E-103 T 22-04-2016 R615_RS02045 7f2dfd913417d8aa682eebd73bfa2d8c 262 SUPERFAMILY SSF56317 4 261 1.83E-80 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS05565 cf602dc46b0c4339369f502694990c9e 126 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 125 7.0E-35 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 R615_RS05565 cf602dc46b0c4339369f502694990c9e 126 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 125 4.0E-9 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 R615_RS01405 4684e05d592ccc8b81b038a88c6793e7 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 426 9.8E-189 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 R615_RS01405 4684e05d592ccc8b81b038a88c6793e7 431 Gene3D G3DSA:3.90.1150.10 2 69 2.4E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS01405 4684e05d592ccc8b81b038a88c6793e7 431 Gene3D G3DSA:3.90.1150.10 319 426 2.4E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS01405 4684e05d592ccc8b81b038a88c6793e7 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 427 103.644 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 R615_RS01405 4684e05d592ccc8b81b038a88c6793e7 431 PANTHER PTHR11986:SF5 1 431 2.1E-225 T 22-04-2016 R615_RS01405 4684e05d592ccc8b81b038a88c6793e7 431 Gene3D G3DSA:3.40.640.10 70 317 1.7E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS01405 4684e05d592ccc8b81b038a88c6793e7 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS01405 4684e05d592ccc8b81b038a88c6793e7 431 SUPERFAMILY SSF53383 3 426 2.11E-134 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS01405 4684e05d592ccc8b81b038a88c6793e7 431 Pfam PF00202 Aminotransferase class-III 32 397 2.2E-75 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS01405 4684e05d592ccc8b81b038a88c6793e7 431 PANTHER PTHR11986 1 431 2.1E-225 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 PANTHER PTHR18919:SF69 3 391 8.7E-197 T 22-04-2016 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 PIRSF PIRSF000429 2 391 9.8E-135 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 SUPERFAMILY SSF53901 4 262 6.29E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 Gene3D G3DSA:3.40.47.10 188 271 2.2E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 Gene3D G3DSA:3.40.47.10 7 130 2.2E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 59.224 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 Pfam PF00108 Thiolase, N-terminal domain 8 256 2.1E-83 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 PANTHER PTHR18919 3 391 8.7E-197 T 22-04-2016 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 Gene3D G3DSA:3.40.47.10 272 390 6.9E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 Gene3D G3DSA:3.40.47.10 145 187 6.9E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 5.3E-139 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 390 1.3E-201 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 SUPERFAMILY SSF53901 266 390 5.19E-43 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS11420 84a7f43061233f91288e7d0c2ad0673a 391 Pfam PF02803 Thiolase, C-terminal domain 265 389 2.0E-48 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 R615_RS14120 d004fbd36f087178c91d7d41865135c1 327 SUPERFAMILY SSF53659 3 326 9.92E-110 T 22-04-2016 R615_RS14120 d004fbd36f087178c91d7d41865135c1 327 PANTHER PTHR30004 1 327 3.2E-191 T 22-04-2016 R615_RS14120 d004fbd36f087178c91d7d41865135c1 327 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 323 6.8E-127 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 R615_RS14120 d004fbd36f087178c91d7d41865135c1 327 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 319 5.0E-107 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 R615_RS14120 d004fbd36f087178c91d7d41865135c1 327 Gene3D G3DSA:3.40.718.10 2 326 4.4E-133 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 R615_RS14120 d004fbd36f087178c91d7d41865135c1 327 PANTHER PTHR30004:SF5 1 327 3.2E-191 T 22-04-2016 R615_RS14120 d004fbd36f087178c91d7d41865135c1 327 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 323 35.532 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 R615_RS09665 2c29e411640e1b1d74ce9b8a793413ae 359 Gene3D G3DSA:3.40.718.10 1 358 7.5E-131 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 R615_RS09665 2c29e411640e1b1d74ce9b8a793413ae 359 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 353 1.0E-157 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 R615_RS09665 2c29e411640e1b1d74ce9b8a793413ae 359 SMART SM01329 4 354 7.3E-208 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 R615_RS09665 2c29e411640e1b1d74ce9b8a793413ae 359 PANTHER PTHR11835 2 358 3.1E-203 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 R615_RS09665 2c29e411640e1b1d74ce9b8a793413ae 359 PANTHER PTHR11835:SF35 2 358 3.1E-203 T 22-04-2016 R615_RS09665 2c29e411640e1b1d74ce9b8a793413ae 359 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 354 3.7E-140 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 R615_RS09665 2c29e411640e1b1d74ce9b8a793413ae 359 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 358 52.698 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 R615_RS09665 2c29e411640e1b1d74ce9b8a793413ae 359 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 R615_RS09665 2c29e411640e1b1d74ce9b8a793413ae 359 SUPERFAMILY SSF53659 1 358 3.06E-124 T 22-04-2016 R615_RS05580 dc19f0daf2b2194dae9a7052f6d5cb03 314 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 252 271 3.4E-19 T 22-04-2016 R615_RS05580 dc19f0daf2b2194dae9a7052f6d5cb03 314 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 124 146 3.4E-19 T 22-04-2016 R615_RS05580 dc19f0daf2b2194dae9a7052f6d5cb03 314 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 3.4E-19 T 22-04-2016 R615_RS05580 dc19f0daf2b2194dae9a7052f6d5cb03 314 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 149 168 3.4E-19 T 22-04-2016 R615_RS05580 dc19f0daf2b2194dae9a7052f6d5cb03 314 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 47 65 3.4E-19 T 22-04-2016 R615_RS05580 dc19f0daf2b2194dae9a7052f6d5cb03 314 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 251 3.4E-19 T 22-04-2016 R615_RS05580 dc19f0daf2b2194dae9a7052f6d5cb03 314 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 205 231 3.4E-19 T 22-04-2016 R615_RS05580 dc19f0daf2b2194dae9a7052f6d5cb03 314 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 272 292 3.4E-19 T 22-04-2016 R615_RS05580 dc19f0daf2b2194dae9a7052f6d5cb03 314 SUPERFAMILY SSF103088 159 289 4.97E-28 T 22-04-2016 IPR006665 OmpA-like domain R615_RS05580 dc19f0daf2b2194dae9a7052f6d5cb03 314 PANTHER PTHR30128 140 300 6.4E-24 T 22-04-2016 R615_RS05580 dc19f0daf2b2194dae9a7052f6d5cb03 314 Pfam PF00691 OmpA family 188 283 1.2E-17 T 22-04-2016 IPR006665 OmpA-like domain R615_RS05580 dc19f0daf2b2194dae9a7052f6d5cb03 314 Gene3D G3DSA:3.30.1330.60 181 289 1.4E-26 T 22-04-2016 IPR006665 OmpA-like domain R615_RS08400 a256b9d314e696a79ae4079bed3b19f5 316 ProSitePatterns PS00958 Transaldolase active site. 127 144 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 R615_RS08400 a256b9d314e696a79ae4079bed3b19f5 316 Pfam PF00923 Transaldolase 13 311 1.4E-103 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 R615_RS08400 a256b9d314e696a79ae4079bed3b19f5 316 PANTHER PTHR10683 1 314 5.5E-177 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 R615_RS08400 a256b9d314e696a79ae4079bed3b19f5 316 Hamap MF_00492 Transaldolase [tal]. 1 316 49.976 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 R615_RS08400 a256b9d314e696a79ae4079bed3b19f5 316 Gene3D G3DSA:3.20.20.70 1 314 1.1E-128 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS08400 a256b9d314e696a79ae4079bed3b19f5 316 TIGRFAM TIGR00874 talAB: transaldolase 3 314 1.6E-147 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 R615_RS08400 a256b9d314e696a79ae4079bed3b19f5 316 SUPERFAMILY SSF51569 1 314 7.85E-113 T 22-04-2016 R615_RS08400 a256b9d314e696a79ae4079bed3b19f5 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 R615_RS08400 a256b9d314e696a79ae4079bed3b19f5 316 PANTHER PTHR10683:SF18 1 314 5.5E-177 T 22-04-2016 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 406 422 2.9E-24 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 2.9E-24 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 325 334 2.9E-24 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 530 544 2.9E-24 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 2.9E-24 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 SMART SM00437 282 567 2.9E-88 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 Gene3D G3DSA:3.40.50.140 1 154 6.0E-45 T 22-04-2016 IPR006171 Toprim domain R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 Pfam PF01751 Toprim domain 3 126 1.8E-14 T 22-04-2016 IPR006171 Toprim domain R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 SMART SM00493 1 124 2.7E-22 T 22-04-2016 IPR006171 Toprim domain R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 PANTHER PTHR11390 1 512 2.8E-168 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 PANTHER PTHR11390 530 623 2.8E-168 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 Gene3D G3DSA:1.10.460.10 159 217 9.5E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 Gene3D G3DSA:1.10.460.10 499 616 9.5E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 655 57.179 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 Gene3D G3DSA:2.70.20.10 219 254 1.1E-39 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 Gene3D G3DSA:2.70.20.10 372 497 1.1E-39 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 648 6.6E-234 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 SMART SM00436 128 223 2.0E-30 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 Pfam PF01131 DNA topoisomerase 158 602 1.3E-116 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 319 334 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 R615_RS01340 7e07f77077691eb22d5cecab1dbc3eaa 668 SUPERFAMILY SSF56712 1 616 5.89E-178 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain R615_RS09425 5826a620b32ad5887a645b402403755f 546 Gene3D G3DSA:3.30.565.10 251 404 2.4E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS09425 5826a620b32ad5887a645b402403755f 546 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 290 405 1.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS09425 5826a620b32ad5887a645b402403755f 546 Gene3D G3DSA:3.40.50.2300 419 542 8.4E-32 T 22-04-2016 R615_RS09425 5826a620b32ad5887a645b402403755f 546 SMART SM00387 290 406 1.9E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS09425 5826a620b32ad5887a645b402403755f 546 SUPERFAMILY SSF47384 165 244 2.55E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS09425 5826a620b32ad5887a645b402403755f 546 Gene3D G3DSA:1.10.287.130 173 239 5.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS09425 5826a620b32ad5887a645b402403755f 546 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 243 1.9E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS09425 5826a620b32ad5887a645b402403755f 546 Pfam PF00072 Response regulator receiver domain 22 132 1.4E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS09425 5826a620b32ad5887a645b402403755f 546 Pfam PF00072 Response regulator receiver domain 425 534 8.8E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS09425 5826a620b32ad5887a645b402403755f 546 Gene3D G3DSA:3.40.50.2300 19 149 8.8E-16 T 22-04-2016 R615_RS09425 5826a620b32ad5887a645b402403755f 546 SUPERFAMILY SSF52172 18 176 6.26E-16 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS09425 5826a620b32ad5887a645b402403755f 546 PANTHER PTHR24423 161 546 1.2E-113 T 22-04-2016 R615_RS09425 5826a620b32ad5887a645b402403755f 546 PANTHER PTHR24423 29 35 1.2E-113 T 22-04-2016 R615_RS09425 5826a620b32ad5887a645b402403755f 546 SUPERFAMILY SSF52172 416 543 4.7E-30 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS09425 5826a620b32ad5887a645b402403755f 546 SMART SM00448 423 534 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS09425 5826a620b32ad5887a645b402403755f 546 SMART SM00448 20 142 1.1E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS09425 5826a620b32ad5887a645b402403755f 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 345 1.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS09425 5826a620b32ad5887a645b402403755f 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 1.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS09425 5826a620b32ad5887a645b402403755f 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 1.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS09425 5826a620b32ad5887a645b402403755f 546 SMART SM00388 178 243 5.3E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS09425 5826a620b32ad5887a645b402403755f 546 SUPERFAMILY SSF55874 232 408 3.01E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS09425 5826a620b32ad5887a645b402403755f 546 PANTHER PTHR24423:SF486 161 546 1.2E-113 T 22-04-2016 R615_RS09425 5826a620b32ad5887a645b402403755f 546 PANTHER PTHR24423:SF486 29 35 1.2E-113 T 22-04-2016 R615_RS16815 178dc2528f99cb9f5402a07cdaff22fc 489 PANTHER PTHR30108:SF1 2 489 2.9E-270 T 22-04-2016 R615_RS16815 178dc2528f99cb9f5402a07cdaff22fc 489 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 3.8E-176 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 R615_RS16815 178dc2528f99cb9f5402a07cdaff22fc 489 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 72.407 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 R615_RS16815 178dc2528f99cb9f5402a07cdaff22fc 489 SUPERFAMILY SSF50475 3 322 1.14E-130 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 R615_RS16815 178dc2528f99cb9f5402a07cdaff22fc 489 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 1.9E-178 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 R615_RS16815 178dc2528f99cb9f5402a07cdaff22fc 489 SUPERFAMILY SSF143968 323 487 9.68E-69 T 22-04-2016 R615_RS16815 178dc2528f99cb9f5402a07cdaff22fc 489 Gene3D G3DSA:3.40.1670.10 337 454 2.0E-55 T 22-04-2016 R615_RS16815 178dc2528f99cb9f5402a07cdaff22fc 489 PANTHER PTHR30108 2 489 2.9E-270 T 22-04-2016 R615_RS16815 178dc2528f99cb9f5402a07cdaff22fc 489 Gene3D G3DSA:1.20.5.570 455 487 2.5E-17 T 22-04-2016 R615_RS05205 dacdcb6cc96843d97a684159f3845c95 246 SUPERFAMILY SSF46894 144 243 4.54E-27 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS05205 dacdcb6cc96843d97a684159f3845c95 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 242 5.1E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS05205 dacdcb6cc96843d97a684159f3845c95 246 SUPERFAMILY SSF52172 10 132 2.7E-38 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS05205 dacdcb6cc96843d97a684159f3845c95 246 Gene3D G3DSA:1.10.10.10 143 245 4.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05205 dacdcb6cc96843d97a684159f3845c95 246 Gene3D G3DSA:3.40.50.2300 9 130 1.9E-36 T 22-04-2016 R615_RS05205 dacdcb6cc96843d97a684159f3845c95 246 PANTHER PTHR26402:SF514 14 246 2.2E-116 T 22-04-2016 R615_RS05205 dacdcb6cc96843d97a684159f3845c95 246 Pfam PF00072 Response regulator receiver domain 16 125 5.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS05205 dacdcb6cc96843d97a684159f3845c95 246 PANTHER PTHR26402 14 246 2.2E-116 T 22-04-2016 R615_RS05205 dacdcb6cc96843d97a684159f3845c95 246 SMART SM00862 166 242 1.7E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS05205 dacdcb6cc96843d97a684159f3845c95 246 SMART SM00448 14 124 1.3E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS00565 e9037a06767c55996b1b4427a796f577 618 SUPERFAMILY SSF50969 182 244 5.57E-14 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like R615_RS00565 e9037a06767c55996b1b4427a796f577 618 SUPERFAMILY SSF50969 280 331 5.57E-14 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like R615_RS00565 e9037a06767c55996b1b4427a796f577 618 SUPERFAMILY SSF50969 361 407 5.57E-14 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like R615_RS00565 e9037a06767c55996b1b4427a796f577 618 SUPERFAMILY SSF50969 533 615 5.57E-14 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like R615_RS00565 e9037a06767c55996b1b4427a796f577 618 PANTHER PTHR21588 135 561 1.8E-67 T 22-04-2016 R615_RS00565 e9037a06767c55996b1b4427a796f577 618 PANTHER PTHR21588:SF5 135 561 1.8E-67 T 22-04-2016 R615_RS00565 e9037a06767c55996b1b4427a796f577 618 Gene3D G3DSA:2.130.10.10 84 252 4.0E-15 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 R615_RS00565 e9037a06767c55996b1b4427a796f577 618 Gene3D G3DSA:2.130.10.10 450 535 4.0E-15 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 R615_RS00565 e9037a06767c55996b1b4427a796f577 618 Gene3D G3DSA:2.130.10.10 298 390 4.0E-15 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 R615_RS09455 bc0fccc886a99b0f131ed9a23912b4d2 138 PANTHER PTHR31793:SF8 4 138 5.2E-37 T 22-04-2016 R615_RS09455 bc0fccc886a99b0f131ed9a23912b4d2 138 PANTHER PTHR31793 4 138 5.2E-37 T 22-04-2016 R615_RS09455 bc0fccc886a99b0f131ed9a23912b4d2 138 Pfam PF03061 Thioesterase superfamily 16 97 1.6E-18 T 22-04-2016 IPR006683 Thioesterase domain R615_RS09455 bc0fccc886a99b0f131ed9a23912b4d2 138 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 100 1.1E-21 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 R615_RS09455 bc0fccc886a99b0f131ed9a23912b4d2 138 SUPERFAMILY SSF54637 3 133 6.1E-33 T 22-04-2016 IPR029069 HotDog domain R615_RS09455 bc0fccc886a99b0f131ed9a23912b4d2 138 Gene3D G3DSA:3.10.129.10 3 134 9.6E-37 T 22-04-2016 IPR029069 HotDog domain R615_RS03140 c95364e7ca62f41e4135cc20bba6f671 225 PANTHER PTHR10993 1 205 3.0E-69 T 22-04-2016 R615_RS03140 c95364e7ca62f41e4135cc20bba6f671 225 Gene3D G3DSA:3.90.1550.10 3 205 6.8E-63 T 22-04-2016 R615_RS03140 c95364e7ca62f41e4135cc20bba6f671 225 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 70 123 7.0E-14 T 22-04-2016 R615_RS03140 c95364e7ca62f41e4135cc20bba6f671 225 SUPERFAMILY SSF55681 2 201 1.82E-59 T 22-04-2016 R615_RS03140 c95364e7ca62f41e4135cc20bba6f671 225 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 66 81 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 R615_RS03140 c95364e7ca62f41e4135cc20bba6f671 225 Hamap MF_00013 Octanoyltransferase [lipB]. 1 208 34.398 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 R615_RS03140 c95364e7ca62f41e4135cc20bba6f671 225 PIRSF PIRSF016262 1 215 2.2E-54 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 R615_RS03140 c95364e7ca62f41e4135cc20bba6f671 225 Pfam PF03099 Biotin/lipoate A/B protein ligase family 57 154 6.4E-6 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 R615_RS03140 c95364e7ca62f41e4135cc20bba6f671 225 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 20 186 8.4E-64 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 4.1E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 SUPERFAMILY SSF46894 135 210 1.6E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 SUPERFAMILY SSF52172 2 132 6.69E-35 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 Gene3D G3DSA:1.10.10.10 153 209 5.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 SMART SM00448 2 115 2.9E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 Gene3D G3DSA:3.40.50.2300 2 152 2.8E-40 T 22-04-2016 R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 SMART SM00421 146 203 8.4E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 PANTHER PTHR26402:SF506 2 210 2.2E-84 T 22-04-2016 R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.4E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.4E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.4E-5 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 PANTHER PTHR26402 2 210 2.2E-84 T 22-04-2016 R615_RS08545 73ca631ded94b2a6d9337cebce9a78f3 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 652 1.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 SUPERFAMILY SSF55874 508 651 2.1E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 SMART SM00387 546 654 1.4E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 Gene3D G3DSA:3.30.565.10 509 651 1.6E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 SUPERFAMILY SSF47384 393 439 2.16E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 651 2.6E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 632 2.6E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 611 2.6E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 597 2.6E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 SMART SM00304 336 388 5.5E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 SUPERFAMILY SSF158472 338 385 6.41E-9 T 22-04-2016 R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 PANTHER PTHR24423 375 426 9.7E-51 T 22-04-2016 R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 PANTHER PTHR24423 470 651 9.7E-51 T 22-04-2016 R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 PANTHER PTHR24423:SF497 375 426 9.7E-51 T 22-04-2016 R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 PANTHER PTHR24423:SF497 470 651 9.7E-51 T 22-04-2016 R615_RS12025 1b9350de044b7d25319f5bf5f6f5f205 657 Pfam PF00672 HAMP domain 317 384 2.0E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS01260 c002d25d450ec5de3e4ab3c975a1f6bd 242 SUPERFAMILY SSF53448 2 236 2.18E-17 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS01260 c002d25d450ec5de3e4ab3c975a1f6bd 242 PIRSF PIRSF028162 1 242 7.9E-87 T 22-04-2016 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted R615_RS01260 c002d25d450ec5de3e4ab3c975a1f6bd 242 Gene3D G3DSA:3.90.550.10 3 237 4.3E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS15430 77970e4025f4609c00433774bb31f198 229 Pfam PF00072 Response regulator receiver domain 3 111 3.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS15430 77970e4025f4609c00433774bb31f198 229 SUPERFAMILY SSF52172 1 175 1.49E-37 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS15430 77970e4025f4609c00433774bb31f198 229 SMART SM00448 1 111 3.0E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS15430 77970e4025f4609c00433774bb31f198 229 Gene3D G3DSA:1.10.10.10 125 225 4.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS15430 77970e4025f4609c00433774bb31f198 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 8.8E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS15430 77970e4025f4609c00433774bb31f198 229 SMART SM00862 146 222 3.1E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS15430 77970e4025f4609c00433774bb31f198 229 PANTHER PTHR26402:SF292 1 225 2.4E-79 T 22-04-2016 R615_RS15430 77970e4025f4609c00433774bb31f198 229 Gene3D G3DSA:3.40.50.2300 1 121 1.8E-38 T 22-04-2016 R615_RS15430 77970e4025f4609c00433774bb31f198 229 PANTHER PTHR26402 1 225 2.4E-79 T 22-04-2016 R615_RS16715 cfc0640846aaf4c39eec933f1a5a73aa 147 PANTHER PTHR35091:SF1 16 146 3.5E-28 T 22-04-2016 R615_RS16715 cfc0640846aaf4c39eec933f1a5a73aa 147 PANTHER PTHR35091 16 146 3.5E-28 T 22-04-2016 R615_RS16715 cfc0640846aaf4c39eec933f1a5a73aa 147 Pfam PF03748 Flagellar basal body-associated protein FliL 45 146 6.0E-22 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 R615_RS02645 6c6c50fd4c4692471e0f7a212c0ca72f 321 SUPERFAMILY SSF144083 256 318 1.7E-19 T 22-04-2016 R615_RS02645 6c6c50fd4c4692471e0f7a212c0ca72f 321 Pfam PF01544 CorA-like Mg2+ transporter protein 29 317 6.3E-60 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 R615_RS02645 6c6c50fd4c4692471e0f7a212c0ca72f 321 Gene3D G3DSA:1.20.58.340 245 321 4.5E-28 T 22-04-2016 R615_RS02645 6c6c50fd4c4692471e0f7a212c0ca72f 321 SUPERFAMILY SSF143865 1 254 7.06E-37 T 22-04-2016 R615_RS02645 6c6c50fd4c4692471e0f7a212c0ca72f 321 Gene3D G3DSA:3.30.460.20 14 120 4.6E-14 T 22-04-2016 R615_RS02645 6c6c50fd4c4692471e0f7a212c0ca72f 321 PANTHER PTHR21535 18 321 1.9E-31 T 22-04-2016 R615_RS02645 6c6c50fd4c4692471e0f7a212c0ca72f 321 Gene3D G3DSA:1.20.58.340 125 241 2.0E-11 T 22-04-2016 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 PANTHER PTHR11469 1 551 3.9E-288 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 525 40.689 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 Pfam PF00342 Phosphoglucose isomerase 52 542 5.7E-202 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 Gene3D G3DSA:1.10.1390.10 508 548 5.9E-20 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 SUPERFAMILY SSF53697 7 550 8.45E-214 T 22-04-2016 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 Gene3D G3DSA:3.40.50.10490 294 507 1.2E-131 T 22-04-2016 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 Gene3D G3DSA:3.40.50.10490 12 98 1.2E-131 T 22-04-2016 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 Gene3D G3DSA:3.40.50.10490 99 292 3.0E-77 T 22-04-2016 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 1.3E-52 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 1.3E-52 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 1.3E-52 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 1.3E-52 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 1.3E-52 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS02535 c211ecec7529ff1bc3afcd6f5a4279d0 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 1.3E-52 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 427 433 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 SUPERFAMILY SSF55008 2 68 1.7E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 138 738 4.2E-181 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 PANTHER PTHR24093:SF319 3 738 1.9E-289 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 Pfam PF00702 haloacid dehalogenase-like hydrolase 421 642 2.1E-38 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 Gene3D G3DSA:3.40.1110.10 440 555 9.2E-26 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 273 287 4.1E-29 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 647 4.1E-29 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 585 4.1E-29 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 651 663 4.1E-29 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 425 439 4.1E-29 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 564 4.1E-29 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 Pfam PF00403 Heavy-metal-associated domain 5 60 5.7E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 Gene3D G3DSA:3.30.70.100 2 63 6.6E-19 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 Pfam PF00122 E1-E2 ATPase 194 416 4.6E-64 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 Gene3D G3DSA:3.40.50.1000 556 696 1.1E-55 T 22-04-2016 IPR023214 HAD-like domain R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 Gene3D G3DSA:3.40.50.1000 396 439 1.1E-55 T 22-04-2016 IPR023214 HAD-like domain R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 659 684 7.1E-9 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 628 644 7.1E-9 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 600 616 7.1E-9 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 SUPERFAMILY SSF81665 324 419 1.18E-9 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 SUPERFAMILY SSF81665 189 227 1.18E-9 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 SUPERFAMILY SSF81665 677 699 1.18E-9 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 203 716 6.6E-85 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 Gene3D G3DSA:2.70.150.10 155 323 2.4E-32 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 SUPERFAMILY SSF56784 482 734 8.84E-57 T 22-04-2016 IPR023214 HAD-like domain R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 SUPERFAMILY SSF56784 425 443 8.84E-57 T 22-04-2016 IPR023214 HAD-like domain R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 156 737 1.1E-185 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 SUPERFAMILY SSF81653 227 323 4.45E-29 T 22-04-2016 R615_RS08720 6e35d6b3d122a90aa1fbaea3c5a2cd9d 745 PANTHER PTHR24093 3 738 1.9E-289 T 22-04-2016 R615_RS15660 6ffa4ee9c5a3c712b68e441912629c13 191 SUPERFAMILY SSF101874 22 191 2.49E-55 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like R615_RS15660 6ffa4ee9c5a3c712b68e441912629c13 191 SMART SM00867 24 189 1.5E-70 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like R615_RS15660 6ffa4ee9c5a3c712b68e441912629c13 191 PANTHER PTHR34406:SF1 1 191 1.4E-55 T 22-04-2016 R615_RS15660 6ffa4ee9c5a3c712b68e441912629c13 191 Gene3D G3DSA:2.40.128.110 22 191 7.7E-59 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like R615_RS15660 6ffa4ee9c5a3c712b68e441912629c13 191 PANTHER PTHR34406 1 191 1.4E-55 T 22-04-2016 R615_RS15660 6ffa4ee9c5a3c712b68e441912629c13 191 Pfam PF04264 YceI-like domain 25 187 1.9E-39 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like R615_RS06335 5ead5ec3ad7e04bb897647524cdd6208 183 Pfam PF01420 Type I restriction modification DNA specificity domain 4 183 3.6E-11 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 R615_RS06335 5ead5ec3ad7e04bb897647524cdd6208 183 SUPERFAMILY SSF116734 3 182 1.64E-25 T 22-04-2016 R615_RS03820 b3711a1afe5eb3f87bdc934f3f70f0e5 134 Pfam PF01475 Ferric uptake regulator family 10 130 7.9E-43 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 R615_RS03820 b3711a1afe5eb3f87bdc934f3f70f0e5 134 SUPERFAMILY SSF46785 8 132 7.44E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS03820 b3711a1afe5eb3f87bdc934f3f70f0e5 134 PANTHER PTHR33202 7 130 5.2E-35 T 22-04-2016 R615_RS03820 b3711a1afe5eb3f87bdc934f3f70f0e5 134 Gene3D G3DSA:1.10.10.10 5 82 9.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 Pfam PF13638 PIN domain 11 156 3.2E-36 T 22-04-2016 IPR002716 PIN domain R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 Pfam PF02562 PhoH-like protein 250 444 5.2E-46 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 Gene3D G3DSA:3.40.50.300 247 456 1.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 PANTHER PTHR30473:SF2 202 454 1.2E-178 T 22-04-2016 R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 PANTHER PTHR30473:SF2 8 183 1.2E-178 T 22-04-2016 R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 SMART SM00670 9 143 3.2E-9 T 22-04-2016 IPR002716 PIN domain R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 Gene3D G3DSA:3.40.50.1010 10 69 5.7E-14 T 22-04-2016 IPR029060 PIN domain-like R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 Gene3D G3DSA:3.40.50.1010 106 161 5.7E-14 T 22-04-2016 IPR029060 PIN domain-like R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 PANTHER PTHR30473 202 454 1.2E-178 T 22-04-2016 R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 PANTHER PTHR30473 8 183 1.2E-178 T 22-04-2016 R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 SUPERFAMILY SSF52540 197 438 9.62E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 SUPERFAMILY SSF88723 106 157 1.05E-13 T 22-04-2016 IPR029060 PIN domain-like R615_RS04440 fafd68e6c8d75079eed03abafc1f1ca7 459 SUPERFAMILY SSF88723 9 70 1.05E-13 T 22-04-2016 IPR029060 PIN domain-like R615_RS17110 5922e84e3054453f2638b4944506d298 450 Gene3D G3DSA:3.40.50.150 86 305 3.7E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS17110 5922e84e3054453f2638b4944506d298 450 SUPERFAMILY SSF53335 87 447 6.28E-84 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS17110 5922e84e3054453f2638b4944506d298 450 Pfam PF00145 C-5 cytosine-specific DNA methylase 87 444 5.4E-80 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS17110 5922e84e3054453f2638b4944506d298 450 PANTHER PTHR10629 1 449 5.7E-75 T 22-04-2016 R615_RS17110 5922e84e3054453f2638b4944506d298 450 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 426 444 - T 22-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 R615_RS17110 5922e84e3054453f2638b4944506d298 450 PANTHER PTHR10629:SF31 1 449 5.7E-75 T 22-04-2016 R615_RS17110 5922e84e3054453f2638b4944506d298 450 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 271 284 6.1E-17 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 R615_RS17110 5922e84e3054453f2638b4944506d298 450 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 217 231 6.1E-17 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 R615_RS17110 5922e84e3054453f2638b4944506d298 450 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 88 104 6.1E-17 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 R615_RS17110 5922e84e3054453f2638b4944506d298 450 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 169 181 - T 22-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 R615_RS17110 5922e84e3054453f2638b4944506d298 450 Gene3D G3DSA:3.90.120.10 306 432 7.5E-30 T 22-04-2016 R615_RS17110 5922e84e3054453f2638b4944506d298 450 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 89 444 3.4E-102 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 R615_RS16020 7af7fc9b87357166b888b338f3feb4d0 388 Pfam PF07885 Ion channel 48 118 7.1E-10 T 22-04-2016 IPR013099 Potassium channel domain R615_RS16020 7af7fc9b87357166b888b338f3feb4d0 388 Gene3D G3DSA:1.10.287.70 14 117 1.7E-15 T 22-04-2016 R615_RS16020 7af7fc9b87357166b888b338f3feb4d0 388 SUPERFAMILY SSF51735 176 288 2.1E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS16020 7af7fc9b87357166b888b338f3feb4d0 388 SUPERFAMILY SSF81324 19 144 5.23E-18 T 22-04-2016 R615_RS16020 7af7fc9b87357166b888b338f3feb4d0 388 Gene3D G3DSA:3.40.50.720 132 265 6.5E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS10425 30d720c38dd78cac63aec7d8a5d10153 227 PANTHER PTHR21600 6 226 3.6E-60 T 22-04-2016 R615_RS10425 30d720c38dd78cac63aec7d8a5d10153 227 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 226 2.6E-43 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 R615_RS10425 30d720c38dd78cac63aec7d8a5d10153 227 SMART SM00363 5 61 8.3E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS10425 30d720c38dd78cac63aec7d8a5d10153 227 PANTHER PTHR21600:SF19 6 226 3.6E-60 T 22-04-2016 R615_RS10425 30d720c38dd78cac63aec7d8a5d10153 227 Pfam PF00849 RNA pseudouridylate synthase 64 197 8.7E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS10425 30d720c38dd78cac63aec7d8a5d10153 227 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 R615_RS10425 30d720c38dd78cac63aec7d8a5d10153 227 SUPERFAMILY SSF55120 63 226 2.16E-41 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS10425 30d720c38dd78cac63aec7d8a5d10153 227 SUPERFAMILY SSF55174 5 91 6.04E-12 T 22-04-2016 R615_RS10425 30d720c38dd78cac63aec7d8a5d10153 227 Gene3D G3DSA:3.10.290.10 6 60 4.1E-15 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS10425 30d720c38dd78cac63aec7d8a5d10153 227 Pfam PF01479 S4 domain 6 50 7.8E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 SUPERFAMILY SSF52540 309 509 2.07E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 PANTHER PTHR19211:SF7 1 553 0.0 T 22-04-2016 R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 Gene3D G3DSA:3.40.50.300 141 288 1.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 Gene3D G3DSA:3.40.50.300 15 105 1.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 SMART SM00382 31 236 6.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 SMART SM00382 348 526 2.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 Pfam PF00005 ABC transporter 22 191 1.5E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 Pfam PF00005 ABC transporter 340 473 1.1E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 552 5.4E-290 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 Gene3D G3DSA:3.40.50.300 322 545 5.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 PANTHER PTHR19211 1 553 0.0 T 22-04-2016 R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 SUPERFAMILY SSF52540 10 244 9.13E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14440 3720f70fa282aa1a1daa7cd3fa38b2ff 553 Pfam PF12848 ABC transporter 230 301 1.8E-12 T 22-04-2016 IPR032781 ABC-transporter extension domain R615_RS05760 8db6e00d4c97159159c04ee72dd68e22 221 PANTHER PTHR10655 10 217 4.9E-56 T 22-04-2016 R615_RS05760 8db6e00d4c97159159c04ee72dd68e22 221 Pfam PF02230 Phospholipase/Carboxylesterase 12 218 3.2E-47 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 R615_RS05760 8db6e00d4c97159159c04ee72dd68e22 221 SUPERFAMILY SSF53474 7 220 2.34E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS05760 8db6e00d4c97159159c04ee72dd68e22 221 PANTHER PTHR10655:SF17 10 217 4.9E-56 T 22-04-2016 R615_RS05760 8db6e00d4c97159159c04ee72dd68e22 221 Gene3D G3DSA:3.40.50.1820 7 219 1.6E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS05120 ed147198263d13c3e21e61e9f7f84f70 258 Gene3D G3DSA:1.10.287.500 76 199 3.8E-40 T 22-04-2016 R615_RS05120 ed147198263d13c3e21e61e9f7f84f70 258 PANTHER PTHR22617:SF35 16 258 5.9E-42 T 22-04-2016 R615_RS05120 ed147198263d13c3e21e61e9f7f84f70 258 SUPERFAMILY SSF75708 40 257 1.7E-56 T 22-04-2016 R615_RS05120 ed147198263d13c3e21e61e9f7f84f70 258 PANTHER PTHR22617 16 258 5.9E-42 T 22-04-2016 R615_RS05120 ed147198263d13c3e21e61e9f7f84f70 258 PIRSF PIRSF002884 27 258 4.5E-70 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- R615_RS05120 ed147198263d13c3e21e61e9f7f84f70 258 Pfam PF04344 Chemotaxis phosphatase, CheZ 50 258 1.3E-67 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.5E-9 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 9.1E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 PANTHER PTHR10359 1 209 2.2E-88 T 22-04-2016 R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 TIGRFAM TIGR01083 nth: endonuclease III 3 194 1.8E-84 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 Gene3D G3DSA:1.10.340.30 23 122 7.4E-34 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 PIRSF PIRSF001435 1 211 1.2E-49 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 PANTHER PTHR10359:SF18 1 209 2.2E-88 T 22-04-2016 R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 SMART SM00478 38 185 2.1E-56 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.371 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 Gene3D G3DSA:1.10.1670.10 123 208 1.4E-35 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 SMART SM00525 186 206 1.6E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 SUPERFAMILY SSF48150 2 207 2.2E-71 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 R615_RS05725 9a6f48a9502bdc5c01804c3c321e2ed5 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.3E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 R615_RS15530 9883c99790a6c39559a885152ca68058 258 Gene3D G3DSA:1.10.3470.10 34 235 2.1E-8 T 22-04-2016 IPR029022 ABC transporter, BtuC-like R615_RS15530 9883c99790a6c39559a885152ca68058 258 SUPERFAMILY SSF81345 3 247 1.31E-34 T 22-04-2016 IPR029022 ABC transporter, BtuC-like R615_RS15530 9883c99790a6c39559a885152ca68058 258 PANTHER PTHR30477 3 258 4.2E-69 T 22-04-2016 R615_RS15530 9883c99790a6c39559a885152ca68058 258 PANTHER PTHR30477:SF0 3 258 4.2E-69 T 22-04-2016 R615_RS15530 9883c99790a6c39559a885152ca68058 258 Pfam PF00950 ABC 3 transport family 3 249 4.1E-68 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 R615_RS09075 3c6447912c3a8cf8c87b55a1bdcc5b9e 210 SUPERFAMILY SSF52540 1 209 7.13E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09075 3c6447912c3a8cf8c87b55a1bdcc5b9e 210 Pfam PF02223 Thymidylate kinase 8 201 9.2E-50 T 22-04-2016 R615_RS09075 3c6447912c3a8cf8c87b55a1bdcc5b9e 210 Hamap MF_00165 Thymidylate kinase [tmk]. 4 210 29.993 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 R615_RS09075 3c6447912c3a8cf8c87b55a1bdcc5b9e 210 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 R615_RS09075 3c6447912c3a8cf8c87b55a1bdcc5b9e 210 Gene3D G3DSA:3.40.50.300 3 209 4.6E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09075 3c6447912c3a8cf8c87b55a1bdcc5b9e 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 201 1.3E-52 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 R615_RS09075 3c6447912c3a8cf8c87b55a1bdcc5b9e 210 PANTHER PTHR10344 1 210 1.8E-67 T 22-04-2016 R615_RS16895 4a89e30cb8ce640dc5b36c7d3a169156 1125 SMART SM00460 171 247 9.0E-19 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS16895 4a89e30cb8ce640dc5b36c7d3a169156 1125 PANTHER PTHR33490:SF1 1 508 1.9E-238 T 22-04-2016 R615_RS16895 4a89e30cb8ce640dc5b36c7d3a169156 1125 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 275 1120 0.0 T 22-04-2016 IPR018667 Domain of unknown function DUF2126 R615_RS16895 4a89e30cb8ce640dc5b36c7d3a169156 1125 SUPERFAMILY SSF54001 9 336 1.54E-70 T 22-04-2016 R615_RS16895 4a89e30cb8ce640dc5b36c7d3a169156 1125 PANTHER PTHR33490 1 508 1.9E-238 T 22-04-2016 R615_RS16895 4a89e30cb8ce640dc5b36c7d3a169156 1125 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 82 4.0E-26 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal R615_RS16895 4a89e30cb8ce640dc5b36c7d3a169156 1125 Gene3D G3DSA:3.90.260.10 175 248 9.4E-10 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS16895 4a89e30cb8ce640dc5b36c7d3a169156 1125 Pfam PF01841 Transglutaminase-like superfamily 129 245 3.1E-17 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS01120 120e8a28f36b3c2eef51e97d104cbdf7 829 Pfam PF02687 FtsX-like permease family 707 815 1.3E-8 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 R615_RS01120 120e8a28f36b3c2eef51e97d104cbdf7 829 PANTHER PTHR30287 5 829 1.0E-120 T 22-04-2016 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 SUPERFAMILY SSF48600 6 98 7.02E-21 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 Pfam PF01842 ACT domain 281 345 3.1E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 308 315 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 PIRSF PIRSF001500 1 363 5.4E-134 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 Gene3D G3DSA:1.20.59.10 3 93 6.3E-23 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 Pfam PF01817 Chorismate mutase type II 11 93 2.8E-23 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 Gene3D G3DSA:3.40.190.10 94 180 1.8E-31 T 22-04-2016 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 TIGRFAM TIGR01807 CM_P2: chorismate mutase 7 85 1.8E-29 T 22-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 PANTHER PTHR21022:SF0 3 359 5.9E-127 T 22-04-2016 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 Pfam PF00800 Prephenate dehydratase 97 272 5.9E-63 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 SUPERFAMILY SSF55021 265 360 9.16E-27 T 22-04-2016 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 Gene3D G3DSA:3.30.70.260 276 361 4.3E-30 T 22-04-2016 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 PANTHER PTHR21022 3 359 5.9E-127 T 22-04-2016 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 SMART SM00830 11 95 3.7E-30 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 SUPERFAMILY SSF53850 96 279 3.58E-58 T 22-04-2016 R615_RS06090 52061d96963413bfb1fa160dd444252b 363 Gene3D G3DSA:3.40.190.10 181 258 6.2E-25 T 22-04-2016 R615_RS09625 1898d22966a1d3bf382b3d8a3ff3fbdc 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 264 35.116 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 R615_RS09625 1898d22966a1d3bf382b3d8a3ff3fbdc 267 Gene3D G3DSA:3.20.20.70 1 265 1.8E-104 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS09625 1898d22966a1d3bf382b3d8a3ff3fbdc 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 R615_RS09625 1898d22966a1d3bf382b3d8a3ff3fbdc 267 SUPERFAMILY SSF51366 1 264 6.59E-94 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 R615_RS09625 1898d22966a1d3bf382b3d8a3ff3fbdc 267 PANTHER PTHR10314:SF4 1 51 7.5E-24 T 22-04-2016 R615_RS09625 1898d22966a1d3bf382b3d8a3ff3fbdc 267 PANTHER PTHR10314:SF4 74 265 7.5E-24 T 22-04-2016 R615_RS09625 1898d22966a1d3bf382b3d8a3ff3fbdc 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 262 1.9E-78 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 R615_RS09625 1898d22966a1d3bf382b3d8a3ff3fbdc 267 PANTHER PTHR10314 1 51 7.5E-24 T 22-04-2016 R615_RS09625 1898d22966a1d3bf382b3d8a3ff3fbdc 267 PANTHER PTHR10314 74 265 7.5E-24 T 22-04-2016 R615_RS09625 1898d22966a1d3bf382b3d8a3ff3fbdc 267 Pfam PF00290 Tryptophan synthase alpha chain 8 262 4.5E-92 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 SMART SM01086 340 435 1.0E-19 T 22-04-2016 IPR019489 Clp ATPase, C-terminal R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 Pfam PF07724 AAA domain (Cdc48 subfamily) 189 334 7.8E-41 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 447 2.0E-214 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 340 410 5.4E-6 T 22-04-2016 IPR019489 Clp ATPase, C-terminal R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 447 42.545 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 Gene3D G3DSA:1.10.8.60 340 447 4.9E-31 T 22-04-2016 R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 Gene3D G3DSA:1.10.8.10 111 181 6.4E-29 T 22-04-2016 R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 Gene3D G3DSA:1.10.8.10 217 247 6.4E-29 T 22-04-2016 R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 PANTHER PTHR11262 222 447 2.0E-206 T 22-04-2016 R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 PANTHER PTHR11262 1 105 2.0E-206 T 22-04-2016 R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 Gene3D G3DSA:3.40.50.300 249 336 1.8E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 Gene3D G3DSA:3.40.50.300 3 110 1.8E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 SMART SM00382 49 337 1.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 SUPERFAMILY SSF52540 3 445 1.23E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 137 2.3E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 PANTHER PTHR11262:SF3 222 447 2.0E-206 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 R615_RS14760 e8e63326e6efd579274ffa855f661bea 447 PANTHER PTHR11262:SF3 1 105 2.0E-206 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 Gene3D G3DSA:1.20.1640.10 292 499 4.5E-41 T 22-04-2016 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 SUPERFAMILY SSF82866 295 492 9.55E-35 T 22-04-2016 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 PANTHER PTHR32063:SF18 3 1020 0.0 T 22-04-2016 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 SUPERFAMILY SSF82693 558 606 3.56E-5 T 22-04-2016 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 SUPERFAMILY SSF82714 710 790 9.55E-7 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 Pfam PF00873 AcrB/AcrD/AcrF family 7 1012 2.7E-161 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.6E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.6E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.6E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 1.6E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.6E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 1.6E-24 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 SUPERFAMILY SSF82714 186 267 6.41E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 SUPERFAMILY SSF82866 793 1015 5.1E-46 T 22-04-2016 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 Gene3D G3DSA:1.10.3850.10 801 1013 1.1E-56 T 22-04-2016 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 SUPERFAMILY SSF82693 42 137 2.14E-18 T 22-04-2016 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 PANTHER PTHR32063 3 1020 0.0 T 22-04-2016 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 SUPERFAMILY SSF82693 138 184 2.2E-17 T 22-04-2016 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 SUPERFAMILY SSF82693 272 327 2.2E-17 T 22-04-2016 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 Gene3D G3DSA:3.30.70.1430 42 141 2.4E-23 T 22-04-2016 R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 Gene3D G3DSA:3.30.2090.10 186 267 8.6E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS11155 8994828cad154ae64513fd5b2666e15a 1020 Gene3D G3DSA:3.30.2090.10 714 790 5.5E-4 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 Gene3D G3DSA:3.10.20.30 414 475 4.0E-23 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 SUPERFAMILY SSF81301 206 419 6.7E-64 T 22-04-2016 R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 PANTHER PTHR21262 16 746 0.0 T 22-04-2016 R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 PANTHER PTHR21262:SF5 16 746 0.0 T 22-04-2016 R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 Pfam PF04607 Region found in RelA / SpoT proteins 261 370 4.8E-37 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 SUPERFAMILY SSF55021 666 743 6.87E-14 T 22-04-2016 R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 Gene3D G3DSA:3.30.460.10 204 350 5.3E-53 T 22-04-2016 R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 Pfam PF02824 TGS domain 415 474 2.5E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 Pfam PF13291 ACT domain 667 743 1.0E-18 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 SUPERFAMILY SSF109604 18 217 1.69E-46 T 22-04-2016 R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 67 742 2.1E-189 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 Gene3D G3DSA:3.30.70.260 668 740 6.4E-16 T 22-04-2016 R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 SUPERFAMILY SSF81271 408 475 1.46E-20 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 Pfam PF13328 HD domain 40 201 2.3E-43 T 22-04-2016 IPR003607 HD/PDEase domain R615_RS12475 dead80f00bad5fcc91a34ad07e93a1d3 750 SMART SM00954 261 371 2.3E-65 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 Gene3D G3DSA:3.30.230.10 220 330 7.9E-38 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 Gene3D G3DSA:3.30.565.10 3 209 7.2E-75 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 SUPERFAMILY SSF55874 3 205 1.57E-53 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 SUPERFAMILY SSF118116 437 626 8.89E-62 T 22-04-2016 R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 SMART SM00853 441 584 1.7E-54 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 2.8E-38 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 126 4.5E-12 T 22-04-2016 R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 PANTHER PTHR10073 4 612 6.6E-162 T 22-04-2016 R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 311 1.7E-97 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 SMART SM01340 213 331 4.8E-59 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 Pfam PF08676 MutL C terminal dimerisation domain 437 584 5.2E-51 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 SUPERFAMILY SSF54211 192 331 1.1E-37 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS02435 2ac30a4852358a2ee524947f02115f1b 628 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 624 28.991 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 R615_RS17070 783e66610dd1fd601956120209a0a7b5 100 Gene3D G3DSA:1.10.260.40 40 91 3.5E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS17070 783e66610dd1fd601956120209a0a7b5 100 Pfam PF01381 Helix-turn-helix 47 91 9.8E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS17070 783e66610dd1fd601956120209a0a7b5 100 SMART SM00530 41 94 0.0042 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS17070 783e66610dd1fd601956120209a0a7b5 100 SUPERFAMILY SSF47413 46 91 2.03E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS06185 529664320f35f3121c3b56e69d772886 372 PANTHER PTHR10366:SF41 2 372 2.8E-186 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 R615_RS06185 529664320f35f3121c3b56e69d772886 372 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 345 8.5E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06185 529664320f35f3121c3b56e69d772886 372 Gene3D G3DSA:3.40.50.720 1 211 3.9E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06185 529664320f35f3121c3b56e69d772886 372 PANTHER PTHR10366 2 372 2.8E-186 T 22-04-2016 R615_RS06185 529664320f35f3121c3b56e69d772886 372 SUPERFAMILY SSF51735 1 357 2.03E-92 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06185 529664320f35f3121c3b56e69d772886 372 Gene3D G3DSA:3.90.25.10 212 362 2.4E-56 T 22-04-2016 R615_RS04390 6bd95a7cdee07c5f6212b5d2987de335 83 Pfam PF00886 Ribosomal protein S16 8 68 5.3E-27 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS04390 6bd95a7cdee07c5f6212b5d2987de335 83 SUPERFAMILY SSF54565 1 76 3.4E-30 T 22-04-2016 IPR023803 Ribosomal protein S16 domain R615_RS04390 6bd95a7cdee07c5f6212b5d2987de335 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.835 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS04390 6bd95a7cdee07c5f6212b5d2987de335 83 PANTHER PTHR12919 1 76 2.4E-42 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS04390 6bd95a7cdee07c5f6212b5d2987de335 83 Gene3D G3DSA:3.30.1320.10 1 78 1.6E-34 T 22-04-2016 IPR023803 Ribosomal protein S16 domain R615_RS04390 6bd95a7cdee07c5f6212b5d2987de335 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 1.3E-29 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15940 8be6cccca1d12580f92fa52ed854fac1 122 PRINTS PR01650 Bacterial translocase SecE signature 42 63 2.8E-24 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 R615_RS15940 8be6cccca1d12580f92fa52ed854fac1 122 PRINTS PR01650 Bacterial translocase SecE signature 63 83 2.8E-24 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 R615_RS15940 8be6cccca1d12580f92fa52ed854fac1 122 PRINTS PR01650 Bacterial translocase SecE signature 87 107 2.8E-24 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 R615_RS15940 8be6cccca1d12580f92fa52ed854fac1 122 PRINTS PR01650 Bacterial translocase SecE signature 107 122 2.8E-24 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 R615_RS15940 8be6cccca1d12580f92fa52ed854fac1 122 Gene3D G3DSA:1.20.5.1030 63 120 9.9E-22 T 22-04-2016 R615_RS15940 8be6cccca1d12580f92fa52ed854fac1 122 PANTHER PTHR33910 1 122 1.5E-24 T 22-04-2016 R615_RS15940 8be6cccca1d12580f92fa52ed854fac1 122 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 120 3.2E-17 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 R615_RS15940 8be6cccca1d12580f92fa52ed854fac1 122 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 122 6.4E-17 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 R615_RS15940 8be6cccca1d12580f92fa52ed854fac1 122 PANTHER PTHR33910:SF1 1 122 1.5E-24 T 22-04-2016 R615_RS15940 8be6cccca1d12580f92fa52ed854fac1 122 Hamap MF_00422 Protein translocase subunit SecE [secE]. 64 119 12.335 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE R615_RS12910 11fb819fc71565a17f3c5146d01dd3de 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 12 281 1.1E-88 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS12910 11fb819fc71565a17f3c5146d01dd3de 286 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 89 100 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS12910 11fb819fc71565a17f3c5146d01dd3de 286 PANTHER PTHR21091 10 233 5.1E-82 T 22-04-2016 R615_RS12910 11fb819fc71565a17f3c5146d01dd3de 286 Gene3D G3DSA:3.40.1010.10 10 118 3.8E-14 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 R615_RS12910 11fb819fc71565a17f3c5146d01dd3de 286 Gene3D G3DSA:3.30.950.10 119 233 2.2E-40 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 R615_RS12910 11fb819fc71565a17f3c5146d01dd3de 286 SUPERFAMILY SSF53790 10 230 2.22E-82 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 R615_RS12910 11fb819fc71565a17f3c5146d01dd3de 286 PANTHER PTHR21091:SF18 10 233 5.1E-82 T 22-04-2016 R615_RS12910 11fb819fc71565a17f3c5146d01dd3de 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 11 211 6.1E-34 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 R615_RS12910 11fb819fc71565a17f3c5146d01dd3de 286 PIRSF PIRSF005917 1 285 9.3E-104 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS12910 11fb819fc71565a17f3c5146d01dd3de 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 11 232 37.971 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS00140 1b5f308a13721dd188791d5226fbcad8 268 SUPERFAMILY SSF56300 10 263 2.78E-54 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS00140 1b5f308a13721dd188791d5226fbcad8 268 PANTHER PTHR12905 10 30 2.4E-71 T 22-04-2016 R615_RS00140 1b5f308a13721dd188791d5226fbcad8 268 Pfam PF00149 Calcineurin-like phosphoesterase 10 199 4.2E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 R615_RS00140 1b5f308a13721dd188791d5226fbcad8 268 Gene3D G3DSA:3.60.21.10 7 245 6.5E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS00140 1b5f308a13721dd188791d5226fbcad8 268 PANTHER PTHR12905 46 268 2.4E-71 T 22-04-2016 R615_RS00140 1b5f308a13721dd188791d5226fbcad8 268 PANTHER PTHR12905:SF7 10 30 2.4E-71 T 22-04-2016 R615_RS00140 1b5f308a13721dd188791d5226fbcad8 268 PANTHER PTHR12905:SF7 46 268 2.4E-71 T 22-04-2016 R615_RS00140 1b5f308a13721dd188791d5226fbcad8 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 199 254 5.0E-15 T 22-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 R615_RS00140 1b5f308a13721dd188791d5226fbcad8 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 10 254 38.795 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 Gene3D G3DSA:1.10.1750.10 428 527 3.4E-41 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 227 247 1.1E-53 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 487 506 1.1E-53 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 291 305 1.1E-53 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 259 273 1.1E-53 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 325 352 1.1E-53 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 SUPERFAMILY SSF48295 425 527 6.28E-37 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 SMART SM00382 226 431 3.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 PANTHER PTHR30050 192 529 8.5E-228 T 22-04-2016 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 PANTHER PTHR30050 8 108 8.5E-228 T 22-04-2016 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 438 506 2.0E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 13 527 2.8E-186 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 SUPERFAMILY SSF52540 196 406 2.45E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 Gene3D G3DSA:1.10.8.60 360 427 6.0E-29 T 22-04-2016 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 PANTHER PTHR30050:SF2 192 529 8.5E-228 T 22-04-2016 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 PANTHER PTHR30050:SF2 8 108 8.5E-228 T 22-04-2016 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 SMART SM00760 437 506 3.7E-45 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 10 528 34.019 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 ProSitePatterns PS01008 DnaA protein signature. 487 506 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 Pfam PF00308 Bacterial dnaA protein 194 411 1.7E-98 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 Pfam PF11638 DnaA N-terminal domain 12 71 9.2E-21 T 22-04-2016 IPR024633 DnaA N-terminal domain R615_RS00005 ef2cad30103a77905f2df8e12bd2ec19 529 Gene3D G3DSA:3.40.50.300 191 358 3.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10055 eadefd5ee41eef4055e259a123eb0d07 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 92 6.3E-14 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family R615_RS10055 eadefd5ee41eef4055e259a123eb0d07 96 SUPERFAMILY SSF143011 1 89 1.22E-5 T 22-04-2016 R615_RS05385 61b2da2926d83956f1155999991c14e4 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 131 4.5E-4 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS05385 61b2da2926d83956f1155999991c14e4 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 46 3.9E-9 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS05385 61b2da2926d83956f1155999991c14e4 256 Gene3D G3DSA:1.20.1180.10 191 256 5.4E-21 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 R615_RS05385 61b2da2926d83956f1155999991c14e4 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 1.5E-23 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 R615_RS05385 61b2da2926d83956f1155999991c14e4 256 PANTHER PTHR23416 1 248 4.2E-118 T 22-04-2016 R615_RS05385 61b2da2926d83956f1155999991c14e4 256 PIRSF PIRSF000456 1 256 2.4E-96 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 R615_RS05385 61b2da2926d83956f1155999991c14e4 256 PANTHER PTHR23416:SF8 1 248 4.2E-118 T 22-04-2016 R615_RS05385 61b2da2926d83956f1155999991c14e4 256 Gene3D G3DSA:2.160.10.10 1 188 2.2E-51 T 22-04-2016 R615_RS05385 61b2da2926d83956f1155999991c14e4 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 254 8.5E-93 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 R615_RS05385 61b2da2926d83956f1155999991c14e4 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 41.176 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 R615_RS05385 61b2da2926d83956f1155999991c14e4 256 SUPERFAMILY SSF51161 1 256 2.95E-78 T 22-04-2016 IPR011004 Trimeric LpxA-like R615_RS05385 61b2da2926d83956f1155999991c14e4 256 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 2 30 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 R615_RS03215 e39622dbb899e02d90827356a91ee7f8 317 SUPERFAMILY SSF52374 17 175 8.73E-34 T 22-04-2016 R615_RS03215 e39622dbb899e02d90827356a91ee7f8 317 PANTHER PTHR22749:SF0 1 314 1.1E-117 T 22-04-2016 R615_RS03215 e39622dbb899e02d90827356a91ee7f8 317 SUPERFAMILY SSF82114 175 310 3.71E-39 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 R615_RS03215 e39622dbb899e02d90827356a91ee7f8 317 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 308 2.5E-87 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 R615_RS03215 e39622dbb899e02d90827356a91ee7f8 317 Pfam PF01687 Riboflavin kinase 184 308 8.2E-34 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 R615_RS03215 e39622dbb899e02d90827356a91ee7f8 317 PIRSF PIRSF004491 1 315 5.9E-98 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 R615_RS03215 e39622dbb899e02d90827356a91ee7f8 317 PANTHER PTHR22749 1 314 1.1E-117 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 R615_RS03215 e39622dbb899e02d90827356a91ee7f8 317 SMART SM00904 183 309 1.5E-51 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 R615_RS03215 e39622dbb899e02d90827356a91ee7f8 317 Gene3D G3DSA:3.40.50.620 1 186 2.2E-61 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS03215 e39622dbb899e02d90827356a91ee7f8 317 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 75 4.1E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 R615_RS03215 e39622dbb899e02d90827356a91ee7f8 317 Gene3D G3DSA:2.40.30.30 188 310 1.0E-34 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 R615_RS03215 e39622dbb899e02d90827356a91ee7f8 317 Pfam PF06574 FAD synthetase 14 167 1.8E-52 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 R615_RS01145 16ceac50c25b3f3ef7f708340f7cd8f9 416 Gene3D G3DSA:3.40.50.300 1 211 1.5E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01145 16ceac50c25b3f3ef7f708340f7cd8f9 416 SMART SM00487 21 222 3.0E-63 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS01145 16ceac50c25b3f3ef7f708340f7cd8f9 416 PANTHER PTHR24031:SF261 1 368 6.8E-172 T 22-04-2016 R615_RS01145 16ceac50c25b3f3ef7f708340f7cd8f9 416 Pfam PF00270 DEAD/DEAH box helicase 26 196 9.3E-55 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS01145 16ceac50c25b3f3ef7f708340f7cd8f9 416 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site R615_RS01145 16ceac50c25b3f3ef7f708340f7cd8f9 416 Pfam PF00271 Helicase conserved C-terminal domain 242 339 1.8E-26 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS01145 16ceac50c25b3f3ef7f708340f7cd8f9 416 Gene3D G3DSA:3.40.50.300 212 369 4.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01145 16ceac50c25b3f3ef7f708340f7cd8f9 416 SUPERFAMILY SSF52540 74 358 4.01E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01145 16ceac50c25b3f3ef7f708340f7cd8f9 416 PANTHER PTHR24031 1 368 6.8E-172 T 22-04-2016 R615_RS01145 16ceac50c25b3f3ef7f708340f7cd8f9 416 SMART SM00490 258 339 2.1E-33 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 SUPERFAMILY SSF47384 202 283 2.94E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 220 283 4.2E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 PANTHER PTHR24423:SF564 157 440 5.5E-62 T 22-04-2016 R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 SMART SM00388 219 284 2.9E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 SMART SM00387 331 442 3.3E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 Gene3D G3DSA:1.10.287.130 209 270 2.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 SUPERFAMILY SSF158472 163 216 4.58E-7 T 22-04-2016 R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 Pfam PF00672 HAMP domain 149 215 9.7E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 425 1.8E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 SUPERFAMILY SSF55874 274 441 3.8E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 SMART SM00304 163 218 6.7E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 Gene3D G3DSA:3.30.565.10 271 440 3.1E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 3.7E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 3.7E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 3.7E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS16645 a200ee534f5d1b271eb9b0d8bfb57c91 445 PANTHER PTHR24423 157 440 5.5E-62 T 22-04-2016 R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 Gene3D G3DSA:3.40.190.10 23 159 2.0E-16 T 22-04-2016 R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 2 468 45.221 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 PANTHER PTHR21666 269 454 2.3E-101 T 22-04-2016 R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 SUPERFAMILY SSF53955 430 448 3.9E-37 T 22-04-2016 IPR023346 Lysozyme-like domain R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 SUPERFAMILY SSF53955 242 395 3.9E-37 T 22-04-2016 IPR023346 Lysozyme-like domain R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 Gene3D G3DSA:1.10.530.10 427 448 1.0E-37 T 22-04-2016 R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 Gene3D G3DSA:1.10.530.10 248 392 1.0E-37 T 22-04-2016 R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 SUPERFAMILY SSF53850 41 262 1.73E-28 T 22-04-2016 R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 262 2.9E-21 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 307 335 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 PANTHER PTHR21666:SF215 269 454 2.3E-101 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 Pfam PF01464 Transglycosylase SLT domain 290 400 1.0E-21 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 R615_RS04300 af53c3d82df320c28f221101ad784fb9 479 SMART SM00062 39 264 2.2E-15 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF R615_RS05870 167188922edb62454957eee72c7377f6 222 Gene3D G3DSA:3.40.30.10 2 83 1.5E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS05870 167188922edb62454957eee72c7377f6 222 Gene3D G3DSA:1.20.1050.10 84 217 7.1E-19 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS05870 167188922edb62454957eee72c7377f6 222 SUPERFAMILY SSF47616 90 220 1.77E-21 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS05870 167188922edb62454957eee72c7377f6 222 SUPERFAMILY SSF52833 1 78 1.1E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS05870 167188922edb62454957eee72c7377f6 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 73 4.2E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 R615_RS05870 167188922edb62454957eee72c7377f6 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 204 3.5E-10 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal R615_RS05870 167188922edb62454957eee72c7377f6 222 PANTHER PTHR11260 1 220 6.6E-89 T 22-04-2016 R615_RS05870 167188922edb62454957eee72c7377f6 222 PANTHER PTHR11260:SF282 1 220 6.6E-89 T 22-04-2016 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 Gene3D G3DSA:3.50.50.60 240 310 2.7E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 283 5.0E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 Gene3D G3DSA:3.50.50.60 104 239 8.6E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 4.8E-9 T 22-04-2016 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 237 251 4.8E-9 T 22-04-2016 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 104 113 4.8E-9 T 22-04-2016 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 4.8E-9 T 22-04-2016 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 Gene3D G3DSA:3.50.50.60 5 103 1.7E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 PANTHER PTHR22912 1 404 4.7E-102 T 22-04-2016 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 4.0E-12 T 22-04-2016 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 4.0E-12 T 22-04-2016 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 4.0E-12 T 22-04-2016 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 4.0E-12 T 22-04-2016 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 PANTHER PTHR22912:SF1 1 404 4.7E-102 T 22-04-2016 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 SUPERFAMILY SSF51905 6 191 7.08E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10010 06388061f70e3e7570613ea68172a58f 413 SUPERFAMILY SSF51905 147 307 1.05E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS11800 a5a173da09f9ce728a836b62c9e814d8 151 Pfam PF03100 CcmE 5 129 6.7E-44 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 R615_RS11800 a5a173da09f9ce728a836b62c9e814d8 151 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 139 32.857 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 R615_RS11800 a5a173da09f9ce728a836b62c9e814d8 151 PANTHER PTHR34128 1 151 2.5E-60 T 22-04-2016 R615_RS11800 a5a173da09f9ce728a836b62c9e814d8 151 PANTHER PTHR34128:SF1 1 151 2.5E-60 T 22-04-2016 R615_RS11800 a5a173da09f9ce728a836b62c9e814d8 151 SUPERFAMILY SSF82093 30 135 6.54E-38 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 R615_RS11800 a5a173da09f9ce728a836b62c9e814d8 151 Gene3D G3DSA:2.40.50.140 27 123 6.4E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06065 6a7043aa2840d86d6565c853d53d6889 246 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 242 37.734 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 R615_RS06065 6a7043aa2840d86d6565c853d53d6889 246 SUPERFAMILY SSF53335 1 221 3.22E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS06065 6a7043aa2840d86d6565c853d53d6889 246 PANTHER PTHR10108:SF910 1 240 5.9E-131 T 22-04-2016 R615_RS06065 6a7043aa2840d86d6565c853d53d6889 246 Pfam PF13489 Methyltransferase domain 57 211 5.8E-26 T 22-04-2016 R615_RS06065 6a7043aa2840d86d6565c853d53d6889 246 Gene3D G3DSA:3.40.50.150 30 223 1.3E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS06065 6a7043aa2840d86d6565c853d53d6889 246 PANTHER PTHR10108 1 240 5.9E-131 T 22-04-2016 R615_RS06065 6a7043aa2840d86d6565c853d53d6889 246 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 18 236 7.1E-85 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 R615_RS05340 31629ae26f55fc677aa9b1a762a49a47 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.306 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 R615_RS05340 31629ae26f55fc677aa9b1a762a49a47 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.6E-72 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 R615_RS05340 31629ae26f55fc677aa9b1a762a49a47 185 Gene3D G3DSA:1.10.132.20 67 185 5.5E-45 T 22-04-2016 IPR023584 Ribosome recycling factor domain R615_RS05340 31629ae26f55fc677aa9b1a762a49a47 185 PANTHER PTHR20982 1 185 2.2E-77 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 R615_RS05340 31629ae26f55fc677aa9b1a762a49a47 185 Pfam PF01765 Ribosome recycling factor 22 183 2.9E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain R615_RS05340 31629ae26f55fc677aa9b1a762a49a47 185 SUPERFAMILY SSF55194 1 185 7.06E-72 T 22-04-2016 IPR023584 Ribosome recycling factor domain R615_RS16465 9a5eaa3680a9608ec5b9a8261de6a3ec 433 Gene3D G3DSA:3.40.630.30 289 431 1.4E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS16465 9a5eaa3680a9608ec5b9a8261de6a3ec 433 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 433 3.3E-173 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 R615_RS16465 9a5eaa3680a9608ec5b9a8261de6a3ec 433 SUPERFAMILY SSF55729 262 405 6.92E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS16465 9a5eaa3680a9608ec5b9a8261de6a3ec 433 PIRSF PIRSF000423 1 433 4.5E-182 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 R615_RS16465 9a5eaa3680a9608ec5b9a8261de6a3ec 433 Pfam PF00696 Amino acid kinase family 25 261 4.7E-23 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS16465 9a5eaa3680a9608ec5b9a8261de6a3ec 433 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 433 196.806 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 R615_RS16465 9a5eaa3680a9608ec5b9a8261de6a3ec 433 Gene3D G3DSA:3.40.1160.10 24 283 7.5E-64 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS16465 9a5eaa3680a9608ec5b9a8261de6a3ec 433 PANTHER PTHR30602 5 433 7.3E-195 T 22-04-2016 R615_RS16465 9a5eaa3680a9608ec5b9a8261de6a3ec 433 Pfam PF00583 Acetyltransferase (GNAT) family 333 392 8.7E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS16465 9a5eaa3680a9608ec5b9a8261de6a3ec 433 PANTHER PTHR30602:SF3 5 433 7.3E-195 T 22-04-2016 R615_RS16465 9a5eaa3680a9608ec5b9a8261de6a3ec 433 SUPERFAMILY SSF53633 4 285 2.23E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 SMART SM01185 69 124 1.9E-15 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 43.402 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 SUPERFAMILY SSF50249 132 188 4.45E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 1.1E-14 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 SMART SM00841 132 187 5.4E-26 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 PANTHER PTHR30053:SF5 1 188 9.5E-86 T 22-04-2016 R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 1.1E-17 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 3.5E-19 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 Gene3D G3DSA:2.30.30.30 1 64 2.6E-11 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 Gene3D G3DSA:2.40.50.140 132 188 4.3E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 PANTHER PTHR30053 1 188 9.5E-86 T 22-04-2016 R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 SUPERFAMILY SSF50249 67 129 3.05E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 SUPERFAMILY SSF50104 1 64 2.17E-12 T 22-04-2016 IPR008991 Translation protein SH3-like domain R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 PIRSF PIRSF005901 1 188 6.3E-60 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 R615_RS01880 aaafd5591d53aa2f221c80a609ee32d9 188 Gene3D G3DSA:2.40.50.140 66 129 4.5E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS03790 3d510d5a28a442e14b637309a5954476 62 Gene3D G3DSA:1.10.10.10 5 60 1.6E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS03790 3d510d5a28a442e14b637309a5954476 62 SUPERFAMILY SSF46955 5 55 1.67E-10 T 22-04-2016 IPR009061 Putative DNA-binding domain R615_RS03790 3d510d5a28a442e14b637309a5954476 62 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 6 53 1.2E-16 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 R615_RS03790 3d510d5a28a442e14b637309a5954476 62 Pfam PF12728 Helix-turn-helix domain 6 54 2.5E-19 T 22-04-2016 R615_RS12345 e3a680b70ff0af175d77df16408f36db 326 Gene3D G3DSA:1.10.10.60 273 322 3.1E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS12345 e3a680b70ff0af175d77df16408f36db 326 Gene3D G3DSA:3.40.50.880 3 225 1.0E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS12345 e3a680b70ff0af175d77df16408f36db 326 PANTHER PTHR11019:SF68 43 326 1.0E-61 T 22-04-2016 R615_RS12345 e3a680b70ff0af175d77df16408f36db 326 Pfam PF01965 DJ-1/PfpI family 43 181 1.1E-14 T 22-04-2016 IPR002818 DJ-1/PfpI R615_RS12345 e3a680b70ff0af175d77df16408f36db 326 SUPERFAMILY SSF46689 272 322 6.48E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS12345 e3a680b70ff0af175d77df16408f36db 326 SUPERFAMILY SSF52317 1 202 2.48E-43 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS12345 e3a680b70ff0af175d77df16408f36db 326 PANTHER PTHR11019 43 326 1.0E-61 T 22-04-2016 R615_RS12345 e3a680b70ff0af175d77df16408f36db 326 SMART SM00342 236 319 6.0E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS12345 e3a680b70ff0af175d77df16408f36db 326 Pfam PF12833 Helix-turn-helix domain 242 321 5.8E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS12345 e3a680b70ff0af175d77df16408f36db 326 SUPERFAMILY SSF46689 219 270 3.07E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS12345 e3a680b70ff0af175d77df16408f36db 326 Gene3D G3DSA:1.10.10.60 226 272 8.5E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS01985 3f574798fae393f5912285a30c2a89cd 99 PIRSF PIRSF029218 3 99 7.3E-30 T 22-04-2016 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 R615_RS01985 3f574798fae393f5912285a30c2a89cd 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 7 94 1.5E-21 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family R615_RS01985 3f574798fae393f5912285a30c2a89cd 99 PANTHER PTHR33755:SF3 3 98 4.3E-21 T 22-04-2016 R615_RS01985 3f574798fae393f5912285a30c2a89cd 99 PANTHER PTHR33755 3 98 4.3E-21 T 22-04-2016 R615_RS13340 1f20e43ddbd134613a651e40e0a624aa 531 Gene3D G3DSA:3.40.50.300 2 270 1.7E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13340 1f20e43ddbd134613a651e40e0a624aa 531 Gene3D G3DSA:3.40.50.300 319 529 1.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13340 1f20e43ddbd134613a651e40e0a624aa 531 PANTHER PTHR19211:SF38 2 528 0.0 T 22-04-2016 R615_RS13340 1f20e43ddbd134613a651e40e0a624aa 531 SMART SM00382 345 513 8.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS13340 1f20e43ddbd134613a651e40e0a624aa 531 SMART SM00382 26 238 1.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS13340 1f20e43ddbd134613a651e40e0a624aa 531 SUPERFAMILY SSF52540 296 524 1.94E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13340 1f20e43ddbd134613a651e40e0a624aa 531 Pfam PF00005 ABC transporter 18 184 2.6E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS13340 1f20e43ddbd134613a651e40e0a624aa 531 Pfam PF00005 ABC transporter 337 468 1.3E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS13340 1f20e43ddbd134613a651e40e0a624aa 531 SUPERFAMILY SSF52540 6 237 2.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13340 1f20e43ddbd134613a651e40e0a624aa 531 Pfam PF12848 ABC transporter 224 309 1.0E-21 T 22-04-2016 IPR032781 ABC-transporter extension domain R615_RS13340 1f20e43ddbd134613a651e40e0a624aa 531 PANTHER PTHR19211 2 528 0.0 T 22-04-2016 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 Gene3D G3DSA:2.40.50.180 642 705 4.3E-14 T 22-04-2016 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 Gene3D G3DSA:2.30.30.40 706 749 2.6E-22 T 22-04-2016 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 Gene3D G3DSA:2.30.30.40 618 639 2.6E-22 T 22-04-2016 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 Pfam PF01584 CheW-like domain 624 752 3.0E-25 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 SMART SM00260 610 750 1.1E-40 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 596 6.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 534 6.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 572 6.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 615 6.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 SUPERFAMILY SSF47384 372 431 3.37E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 Gene3D G3DSA:3.30.565.10 433 617 1.8E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 SMART SM00387 475 618 2.4E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 Gene3D G3DSA:1.20.120.160 4 144 5.9E-45 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 SMART SM00073 6 103 1.4E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 PANTHER PTHR22617:SF6 1 152 7.9E-268 T 22-04-2016 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 PANTHER PTHR22617:SF6 180 759 7.9E-268 T 22-04-2016 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 SUPERFAMILY SSF50341 617 750 4.05E-32 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 SUPERFAMILY SSF47226 6 128 5.36E-32 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 Pfam PF01627 Hpt domain 8 100 1.0E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 SUPERFAMILY SSF55874 433 616 2.88E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 PANTHER PTHR22617 1 152 7.9E-268 T 22-04-2016 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 PANTHER PTHR22617 180 759 7.9E-268 T 22-04-2016 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 371 430 2.3E-14 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 SMART SM01231 370 430 2.5E-18 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 Gene3D G3DSA:1.10.287.560 371 431 2.8E-19 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 R615_RS05125 95c5a5dc5f9254121c955d40bdbbd037 761 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 617 3.6E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 PANTHER PTHR30534:SF0 1 341 8.6E-110 T 22-04-2016 R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 Pfam PF01706 FliG C-terminal domain 226 333 3.0E-40 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 Pfam PF14841 FliG middle domain 124 195 1.6E-25 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 SUPERFAMILY SSF48029 16 124 1.7E-23 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 PIRSF PIRSF003161 8 341 2.3E-114 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 14 30 1.5E-62 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 281 307 1.5E-62 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 123 146 1.5E-62 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 43 69 1.5E-62 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 204 229 1.5E-62 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 257 277 1.5E-62 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 PRINTS PR00954 Flagellar motor switch protein FliG signature 235 255 1.5E-62 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 SUPERFAMILY SSF48029 123 334 3.01E-67 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 PANTHER PTHR30534 1 341 8.6E-110 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 Pfam PF14842 FliG N-terminal domain 14 114 6.5E-33 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 8 338 7.6E-100 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 Gene3D G3DSA:1.10.220.30 17 81 5.6E-16 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 Gene3D G3DSA:1.10.220.30 82 194 3.0E-30 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical R615_RS04970 7ff833c7e33128faea7c60b073ff142f 341 Gene3D G3DSA:1.10.220.30 204 339 2.0E-40 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Gene3D G3DSA:3.30.1490.20 129 201 3.3E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Pfam PF02626 Allophanate hydrolase subunit 2 477 754 3.5E-81 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 454 775 2.2E-84 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 SUPERFAMILY SSF50891 926 1056 1.1E-25 T 22-04-2016 IPR029000 Cyclophilin-like domain R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1207 0.0 T 22-04-2016 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703|UniPathway: UPA00258|UniPathway: UPA00258 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Gene3D G3DSA:3.30.1360.40 811 891 4.6E-26 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 SMART SM00796 809 1040 2.7E-113 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 PANTHER PTHR18866 1 547 1.2E-263 T 22-04-2016 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 PANTHER PTHR18866 1117 1207 1.2E-263 T 22-04-2016 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Gene3D G3DSA:2.40.100.10 634 767 3.5E-32 T 22-04-2016 IPR029000 Cyclophilin-like domain R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Gene3D G3DSA:2.40.100.10 926 1061 1.7E-44 T 22-04-2016 IPR029000 Cyclophilin-like domain R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 SUPERFAMILY SSF56059 83 323 8.31E-64 T 22-04-2016 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 SUPERFAMILY SSF51230 1132 1206 1.01E-17 T 22-04-2016 IPR011053 Single hybrid motif R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 SUPERFAMILY SSF160467 811 902 7.59E-20 T 22-04-2016 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 SUPERFAMILY SSF51246 330 447 5.76E-30 T 22-04-2016 IPR011054 Rudiment single hybrid motif R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Pfam PF00364 Biotin-requiring enzyme 1147 1206 2.0E-16 T 22-04-2016 IPR000089 Biotin/lipoyl attachment R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Gene3D G3DSA:3.30.470.20 202 446 7.4E-86 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Gene3D G3DSA:2.40.50.100 1141 1208 4.4E-20 T 22-04-2016 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 2.8E-65 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 SMART SM00797 476 771 1.2E-149 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 6.3E-42 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Pfam PF02785 Biotin carboxylase C-terminal domain 335 445 1.2E-29 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 SUPERFAMILY SSF50891 635 759 1.74E-31 T 22-04-2016 IPR029000 Cyclophilin-like domain R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Gene3D G3DSA:3.40.50.20 1 128 8.2E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 PANTHER PTHR18866:SF91 1 547 1.2E-263 T 22-04-2016 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 PANTHER PTHR18866:SF91 1117 1207 1.2E-263 T 22-04-2016 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 Pfam PF02682 Allophanate hydrolase subunit 1 810 1030 3.5E-47 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 SUPERFAMILY SSF52440 1 112 4.32E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS05460 37b9cbdaff44707f473e1f073e8815e2 1210 SMART SM00878 335 445 6.6E-41 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal R615_RS00875 4a1b789ab23342628d176efa7a04b3b0 267 PANTHER PTHR30096:SF0 8 243 1.0E-86 T 22-04-2016 R615_RS00875 4a1b789ab23342628d176efa7a04b3b0 267 Gene3D G3DSA:3.40.830.10 3 246 7.8E-88 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 R615_RS00875 4a1b789ab23342628d176efa7a04b3b0 267 PIRSF PIRSF006157 2 264 5.6E-85 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 R615_RS00875 4a1b789ab23342628d176efa7a04b3b0 267 SUPERFAMILY SSF53213 8 245 4.58E-78 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 R615_RS00875 4a1b789ab23342628d176efa7a04b3b0 267 PANTHER PTHR30096 8 243 1.0E-86 T 22-04-2016 R615_RS00875 4a1b789ab23342628d176efa7a04b3b0 267 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 36 245 2.1E-32 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 R615_RS14285 dd565972fa5eded409fb7f048cd84649 526 PANTHER PTHR23023:SF132 9 489 3.6E-187 T 22-04-2016 R615_RS14285 dd565972fa5eded409fb7f048cd84649 526 PANTHER PTHR23023 9 489 3.6E-187 T 22-04-2016 R615_RS14285 dd565972fa5eded409fb7f048cd84649 526 SUPERFAMILY SSF51905 299 418 1.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14285 dd565972fa5eded409fb7f048cd84649 526 SUPERFAMILY SSF51905 14 233 1.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14285 dd565972fa5eded409fb7f048cd84649 526 Gene3D G3DSA:3.50.50.60 9 224 8.7E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14285 dd565972fa5eded409fb7f048cd84649 526 Gene3D G3DSA:3.50.50.60 326 489 3.3E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14285 dd565972fa5eded409fb7f048cd84649 526 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 15 228 1.1E-19 T 22-04-2016 R615_RS10250 60f811df94f60056590eb277faf376f6 325 PANTHER PTHR30465:SF24 1 70 7.1E-93 T 22-04-2016 R615_RS10250 60f811df94f60056590eb277faf376f6 325 PANTHER PTHR30465:SF24 93 324 7.1E-93 T 22-04-2016 R615_RS10250 60f811df94f60056590eb277faf376f6 325 PANTHER PTHR30465 1 70 7.1E-93 T 22-04-2016 R615_RS10250 60f811df94f60056590eb277faf376f6 325 PANTHER PTHR30465 93 324 7.1E-93 T 22-04-2016 R615_RS10250 60f811df94f60056590eb277faf376f6 325 Gene3D G3DSA:1.10.3720.10 105 311 2.2E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS10250 60f811df94f60056590eb277faf376f6 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 323 1.1E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS10250 60f811df94f60056590eb277faf376f6 325 SUPERFAMILY SSF161098 105 306 7.19E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SMART SM00052 984 1229 1.1E-113 T 22-04-2016 IPR001633 EAL domain R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Pfam PF00563 EAL domain 990 1224 7.5E-72 T 22-04-2016 IPR001633 EAL domain R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SMART SM00448 558 671 1.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SMART SM00448 271 387 7.8E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SMART SM00448 129 247 2.3E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SUPERFAMILY SSF52172 271 392 1.85E-35 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Pfam PF00990 Diguanylate cyclase, GGDEF domain 813 969 1.7E-48 T 22-04-2016 IPR000160 GGDEF domain R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SUPERFAMILY SSF52172 127 251 7.12E-25 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SUPERFAMILY SSF141868 989 1235 2.75E-85 T 22-04-2016 IPR001633 EAL domain R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SMART SM00387 1 112 3.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 PRINTS PR00344 Bacterial sensor protein C-terminal signature 96 109 5.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 PRINTS PR00344 Bacterial sensor protein C-terminal signature 37 51 5.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 PRINTS PR00344 Bacterial sensor protein C-terminal signature 55 65 5.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 PRINTS PR00344 Bacterial sensor protein C-terminal signature 72 90 5.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Pfam PF01627 Hpt domain 452 531 1.3E-6 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 PANTHER PTHR24423:SF525 1 115 1.3E-95 T 22-04-2016 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 PANTHER PTHR24423:SF525 252 429 1.3E-95 T 22-04-2016 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Gene3D G3DSA:3.30.450.20 684 800 5.5E-11 T 22-04-2016 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SUPERFAMILY SSF47226 413 535 2.49E-18 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Gene3D G3DSA:3.20.20.450 987 1235 4.8E-94 T 22-04-2016 IPR001633 EAL domain R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1 111 3.0E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Gene3D G3DSA:1.20.120.160 439 537 3.4E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Gene3D G3DSA:3.30.70.270 814 978 2.7E-54 T 22-04-2016 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SUPERFAMILY SSF52172 557 692 2.7E-35 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Pfam PF00072 Response regulator receiver domain 131 246 2.5E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Pfam PF00072 Response regulator receiver domain 560 671 1.5E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Pfam PF00072 Response regulator receiver domain 273 384 2.6E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 811 972 3.9E-42 T 22-04-2016 IPR000160 GGDEF domain R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SUPERFAMILY SSF55874 1 148 3.41E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Gene3D G3DSA:3.30.565.10 1 116 2.0E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 PANTHER PTHR24423 1 115 1.3E-95 T 22-04-2016 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 PANTHER PTHR24423 252 429 1.3E-95 T 22-04-2016 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SMART SM00267 802 974 1.4E-64 T 22-04-2016 IPR000160 GGDEF domain R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Gene3D G3DSA:3.40.50.2300 553 683 2.8E-36 T 22-04-2016 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Gene3D G3DSA:3.40.50.2300 127 254 3.5E-27 T 22-04-2016 R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SUPERFAMILY SSF55785 680 800 3.26E-7 T 22-04-2016 IPR000014 PAS domain R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 SUPERFAMILY SSF55073 818 976 1.73E-47 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS17200 a5f0362f817317c309b274cc74c83d7d 1240 Gene3D G3DSA:3.40.50.2300 271 395 1.5E-39 T 22-04-2016 R615_RS04930 f212744736ed3f73a5f0cbdd8236a54c 657 SUPERFAMILY SSF48452 14 144 8.85E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS04930 f212744736ed3f73a5f0cbdd8236a54c 657 Gene3D G3DSA:3.40.50.150 580 652 7.1E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS04930 f212744736ed3f73a5f0cbdd8236a54c 657 Gene3D G3DSA:3.40.50.150 397 538 7.1E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS04930 f212744736ed3f73a5f0cbdd8236a54c 657 Gene3D G3DSA:1.25.40.10 21 149 1.4E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS04930 f212744736ed3f73a5f0cbdd8236a54c 657 PANTHER PTHR10108:SF705 362 547 1.4E-18 T 22-04-2016 R615_RS04930 f212744736ed3f73a5f0cbdd8236a54c 657 PANTHER PTHR10108:SF705 575 601 1.4E-18 T 22-04-2016 R615_RS04930 f212744736ed3f73a5f0cbdd8236a54c 657 Pfam PF13847 Methyltransferase domain 409 533 3.2E-17 T 22-04-2016 IPR025714 Methyltransferase domain R615_RS04930 f212744736ed3f73a5f0cbdd8236a54c 657 PANTHER PTHR10108 362 547 1.4E-18 T 22-04-2016 R615_RS04930 f212744736ed3f73a5f0cbdd8236a54c 657 PANTHER PTHR10108 575 601 1.4E-18 T 22-04-2016 R615_RS04930 f212744736ed3f73a5f0cbdd8236a54c 657 SUPERFAMILY SSF53335 385 611 1.49E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS02185 10dc74c316742ee18c92dfd2de7747b6 540 Gene3D G3DSA:3.40.50.300 1 280 1.5E-129 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02185 10dc74c316742ee18c92dfd2de7747b6 540 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 4.0E-246 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 R615_RS02185 10dc74c316742ee18c92dfd2de7747b6 540 Pfam PF00117 Glutamine amidotransferase class-I 300 533 3.2E-59 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 R615_RS02185 10dc74c316742ee18c92dfd2de7747b6 540 SUPERFAMILY SSF52540 1 268 8.21E-119 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02185 10dc74c316742ee18c92dfd2de7747b6 540 Gene3D G3DSA:3.40.50.880 286 539 1.1E-97 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS02185 10dc74c316742ee18c92dfd2de7747b6 540 SUPERFAMILY SSF52317 287 539 8.43E-88 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS02185 10dc74c316742ee18c92dfd2de7747b6 540 Pfam PF06418 CTP synthase N-terminus 3 265 1.8E-122 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 R615_RS02185 10dc74c316742ee18c92dfd2de7747b6 540 Hamap MF_01227 CTP synthase [pyrG]. 2 539 49.939 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 R615_RS02185 10dc74c316742ee18c92dfd2de7747b6 540 PANTHER PTHR11550 1 536 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 Pfam PF02151 UvrB/uvrC motif 204 236 4.1E-7 T 22-04-2016 IPR001943 UVR domain GO:0005515 R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 PANTHER PTHR30562:SF1 6 603 2.2E-222 T 22-04-2016 R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 SUPERFAMILY SSF47781 517 604 7.63E-21 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 Gene3D G3DSA:1.10.150.20 551 604 4.0E-19 T 22-04-2016 R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 583 1.3E-162 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 PANTHER PTHR30562 6 603 2.2E-222 T 22-04-2016 R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 Pfam PF01541 GIY-YIG catalytic domain 17 92 2.2E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 383 537 1.1E-43 T 22-04-2016 IPR001162 UvrC family homology region R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 SUPERFAMILY SSF46600 189 241 2.22E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 SUPERFAMILY SSF82771 16 99 2.09E-22 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 Gene3D G3DSA:3.40.1440.10 16 95 3.8E-9 T 22-04-2016 IPR027299 GIY-YIG domain R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 602 26.207 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 Gene3D G3DSA:4.10.860.10 181 241 1.2E-16 T 22-04-2016 IPR001943 UVR domain GO:0005515 R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 SMART SM00278 551 570 1.7 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 SMART SM00278 583 602 2.8 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 SMART SM00465 16 97 1.7E-22 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily R615_RS08550 91462a26af03e9f79b0b64b399f401ac 607 Pfam PF14520 Helix-hairpin-helix domain 552 601 5.3E-7 T 22-04-2016 R615_RS04985 5e9a9a89f417add257e1c078fdbc7863 153 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 9 146 2.7E-18 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 R615_RS04985 5e9a9a89f417add257e1c078fdbc7863 153 PANTHER PTHR38786 7 153 1.1E-18 T 22-04-2016 R615_RS04985 5e9a9a89f417add257e1c078fdbc7863 153 Pfam PF02050 Flagellar FliJ protein 24 145 4.6E-21 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 Gene3D G3DSA:3.40.50.20 2 95 1.0E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 5.0E-81 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 5.4E-173 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.7E-27 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 PANTHER PTHR10520 1 426 7.5E-275 T 22-04-2016 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 SUPERFAMILY SSF52440 1 103 1.35E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 2.6E-34 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 Gene3D G3DSA:3.30.1490.20 121 190 1.1E-32 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 SUPERFAMILY SSF51246 329 423 4.08E-29 T 22-04-2016 IPR011054 Rudiment single hybrid motif R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 SUPERFAMILY SSF56059 104 326 3.01E-65 T 22-04-2016 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 Gene3D G3DSA:3.90.600.10 331 423 8.5E-31 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 SMART SM01209 103 296 1.0E-135 T 22-04-2016 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 42.318 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 SMART SM01210 330 423 2.7E-49 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 R615_RS03345 b5a6d6c99b032a3b7cda8b6df6e06350 429 Gene3D G3DSA:3.30.470.20 192 328 2.5E-62 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS13920 44d317cb7982fa0021a9a8a17e6dad00 354 PANTHER PTHR22976 15 354 5.4E-175 T 22-04-2016 R615_RS13920 44d317cb7982fa0021a9a8a17e6dad00 354 TIGRFAM TIGR00433 bioB: biotin synthase 22 318 2.3E-124 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 R615_RS13920 44d317cb7982fa0021a9a8a17e6dad00 354 Hamap MF_01694 Biotin synthase [bioB]. 13 321 42.07 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 R615_RS13920 44d317cb7982fa0021a9a8a17e6dad00 354 PIRSF PIRSF001619 1 327 1.1E-135 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 R615_RS13920 44d317cb7982fa0021a9a8a17e6dad00 354 PANTHER PTHR22976:SF1 15 354 5.4E-175 T 22-04-2016 R615_RS13920 44d317cb7982fa0021a9a8a17e6dad00 354 SUPERFAMILY SSF102114 13 318 6.41E-93 T 22-04-2016 R615_RS13920 44d317cb7982fa0021a9a8a17e6dad00 354 Gene3D G3DSA:3.20.20.70 13 319 5.0E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS13920 44d317cb7982fa0021a9a8a17e6dad00 354 SMART SM00876 228 320 1.1E-43 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 R615_RS13920 44d317cb7982fa0021a9a8a17e6dad00 354 Pfam PF04055 Radical SAM superfamily 58 210 8.3E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 R615_RS13920 44d317cb7982fa0021a9a8a17e6dad00 354 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 228 318 8.2E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 R615_RS13920 44d317cb7982fa0021a9a8a17e6dad00 354 SMART SM00729 51 263 5.9E-39 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 R615_RS13490 8071ea6385eb42c1c79f86f4dbc89086 563 PANTHER PTHR19446 93 361 4.0E-77 T 22-04-2016 R615_RS13490 8071ea6385eb42c1c79f86f4dbc89086 563 SUPERFAMILY SSF56672 80 406 2.48E-49 T 22-04-2016 R615_RS13490 8071ea6385eb42c1c79f86f4dbc89086 563 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 61 410 8.7E-115 T 22-04-2016 IPR030931 Group II intron reverse transcriptase/maturase R615_RS13490 8071ea6385eb42c1c79f86f4dbc89086 563 Pfam PF01844 HNH endonuclease 503 548 2.4E-12 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 R615_RS13490 8071ea6385eb42c1c79f86f4dbc89086 563 Pfam PF08388 Group II intron, maturase-specific domain 345 423 2.8E-21 T 22-04-2016 IPR013597 Group II intron, maturase-specific R615_RS13490 8071ea6385eb42c1c79f86f4dbc89086 563 SMART SM00507 492 544 2.6E-9 T 22-04-2016 IPR003615 HNH nuclease R615_RS13490 8071ea6385eb42c1c79f86f4dbc89086 563 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 113 329 1.2E-43 T 22-04-2016 IPR000477 Reverse transcriptase domain R615_RS13490 8071ea6385eb42c1c79f86f4dbc89086 563 Pfam PF13655 N-terminal domain of reverse transcriptase 17 97 3.6E-31 T 22-04-2016 IPR025960 Reverse transcriptase, N-terminal domain R615_RS13490 8071ea6385eb42c1c79f86f4dbc89086 563 PANTHER PTHR19446:SF383 93 361 4.0E-77 T 22-04-2016 R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 PRINTS PR01021 OMPA domain signature 322 338 2.4E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 PRINTS PR01021 OMPA domain signature 307 322 2.4E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 PRINTS PR01021 OMPA domain signature 277 299 2.4E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 SUPERFAMILY SSF103088 274 377 9.16E-36 T 22-04-2016 IPR006665 OmpA-like domain R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 Gene3D G3DSA:3.30.1330.60 274 378 1.0E-39 T 22-04-2016 IPR006665 OmpA-like domain R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 Pfam PF00691 OmpA family 277 371 3.4E-22 T 22-04-2016 IPR006665 OmpA-like domain R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 PANTHER PTHR30128 216 377 1.2E-46 T 22-04-2016 R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 Gene3D G3DSA:2.40.160.20 32 218 3.9E-13 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 PANTHER PTHR30128:SF10 216 377 1.2E-46 T 22-04-2016 R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 SUPERFAMILY SSF56925 43 196 2.88E-17 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 Gene3D G3DSA:4.10.1080.10 219 265 8.4E-4 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 SUPERFAMILY SSF103647 237 266 3.4E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01100 159fab9b72d082c75583c8bb613a5573 379 Pfam PF13505 Outer membrane protein beta-barrel domain 30 194 4.2E-13 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel R615_RS12165 718e86759d07a9c5d98f07a2904492fc 69 Gene3D G3DSA:2.40.50.140 5 67 5.5E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12165 718e86759d07a9c5d98f07a2904492fc 69 PANTHER PTHR11544 1 68 1.5E-35 T 22-04-2016 R615_RS12165 718e86759d07a9c5d98f07a2904492fc 69 PIRSF PIRSF002599 1 69 3.0E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 R615_RS12165 718e86759d07a9c5d98f07a2904492fc 69 SMART SM00357 6 69 3.5E-29 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 R615_RS12165 718e86759d07a9c5d98f07a2904492fc 69 PRINTS PR00050 Cold shock protein signature 42 60 3.0E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 R615_RS12165 718e86759d07a9c5d98f07a2904492fc 69 PRINTS PR00050 Cold shock protein signature 7 22 3.0E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 R615_RS12165 718e86759d07a9c5d98f07a2904492fc 69 PRINTS PR00050 Cold shock protein signature 27 36 3.0E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 R615_RS12165 718e86759d07a9c5d98f07a2904492fc 69 SUPERFAMILY SSF50249 3 68 1.14E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12165 718e86759d07a9c5d98f07a2904492fc 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 22-04-2016 IPR019844 Cold-shock conserved site R615_RS12165 718e86759d07a9c5d98f07a2904492fc 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.2E-28 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 R615_RS14460 bc459d4f537a55b0e0217a48ce8ad5d9 305 PANTHER PTHR39456:SF2 11 291 2.0E-81 T 22-04-2016 R615_RS14460 bc459d4f537a55b0e0217a48ce8ad5d9 305 PIRSF PIRSF007580 7 287 9.4E-80 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS14460 bc459d4f537a55b0e0217a48ce8ad5d9 305 Pfam PF10118 Predicted metal-dependent hydrolase 24 270 5.1E-86 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS14460 bc459d4f537a55b0e0217a48ce8ad5d9 305 PANTHER PTHR39456 11 291 2.0E-81 T 22-04-2016 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 Gene3D G3DSA:2.170.170.11 298 335 3.7E-67 T 22-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 Gene3D G3DSA:2.170.170.11 136 264 3.7E-67 T 22-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 Gene3D G3DSA:1.10.1860.10 1 88 1.1E-36 T 22-04-2016 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 Gene3D G3DSA:1.20.1220.12 593 724 9.7E-72 T 22-04-2016 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 Pfam PF01274 Malate synthase 17 693 1.4E-178 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 Gene3D G3DSA:3.20.20.360 266 296 2.7E-142 T 22-04-2016 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 Gene3D G3DSA:3.20.20.360 336 586 2.7E-142 T 22-04-2016 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 Gene3D G3DSA:3.20.20.360 89 135 2.7E-142 T 22-04-2016 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 Hamap MF_00641 Malate synthase G [glcB]. 1 725 398.489 T 22-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 PANTHER PTHR21631 501 723 3.1E-124 T 22-04-2016 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 PANTHER PTHR21631 31 41 3.1E-124 T 22-04-2016 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 SUPERFAMILY SSF51645 2 723 4.84E-301 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 724 0.0 T 22-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 PANTHER PTHR21631:SF7 501 723 3.1E-124 T 22-04-2016 R615_RS07985 5c6ecace30fa19d369e67cc1bf88f4d9 725 PANTHER PTHR21631:SF7 31 41 3.1E-124 T 22-04-2016 R615_RS12870 b7580c2c74b3661a194859d73aef2699 127 PANTHER PTHR33164 1 127 2.5E-21 T 22-04-2016 R615_RS12870 b7580c2c74b3661a194859d73aef2699 127 Pfam PF01047 MarR family 21 78 1.1E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS12870 b7580c2c74b3661a194859d73aef2699 127 SUPERFAMILY SSF46785 3 126 2.77E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS12870 b7580c2c74b3661a194859d73aef2699 127 Gene3D G3DSA:1.10.10.10 2 124 1.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS12870 b7580c2c74b3661a194859d73aef2699 127 SMART SM00347 13 113 1.4E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS12870 b7580c2c74b3661a194859d73aef2699 127 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 89 3.8E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS12870 b7580c2c74b3661a194859d73aef2699 127 PRINTS PR00598 Bacterial regulatory protein MarR family signature 37 53 3.8E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS12870 b7580c2c74b3661a194859d73aef2699 127 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 69 3.8E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS12870 b7580c2c74b3661a194859d73aef2699 127 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 123 3.8E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS06710 aa11f8bcadfb2dd4fdbf9a7e9158f536 358 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 335 35.472 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 R615_RS06710 aa11f8bcadfb2dd4fdbf9a7e9158f536 358 PANTHER PTHR11609 1 337 2.6E-93 T 22-04-2016 R615_RS06710 aa11f8bcadfb2dd4fdbf9a7e9158f536 358 Gene3D G3DSA:3.30.1490.20 99 162 3.9E-22 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS06710 aa11f8bcadfb2dd4fdbf9a7e9158f536 358 Gene3D G3DSA:3.40.50.20 1 67 5.6E-14 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS06710 aa11f8bcadfb2dd4fdbf9a7e9158f536 358 SUPERFAMILY SSF52440 1 83 2.88E-10 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS06710 aa11f8bcadfb2dd4fdbf9a7e9158f536 358 SUPERFAMILY SSF51246 289 354 2.04E-11 T 22-04-2016 IPR011054 Rudiment single hybrid motif R615_RS06710 aa11f8bcadfb2dd4fdbf9a7e9158f536 358 Pfam PF02222 ATP-grasp domain 93 262 2.1E-52 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 R615_RS06710 aa11f8bcadfb2dd4fdbf9a7e9158f536 358 Gene3D G3DSA:3.30.470.20 163 342 5.9E-52 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS06710 aa11f8bcadfb2dd4fdbf9a7e9158f536 358 PANTHER PTHR11609:SF5 1 337 2.6E-93 T 22-04-2016 R615_RS06710 aa11f8bcadfb2dd4fdbf9a7e9158f536 358 SUPERFAMILY SSF56059 84 281 1.1E-56 T 22-04-2016 R615_RS07385 b239634537cf8ed589c919f166702b3a 600 Gene3D G3DSA:2.40.110.10 160 267 1.1E-27 T 22-04-2016 R615_RS07385 b239634537cf8ed589c919f166702b3a 600 PANTHER PTHR10909:SF154 1 480 1.2E-237 T 22-04-2016 R615_RS07385 b239634537cf8ed589c919f166702b3a 600 Gene3D G3DSA:1.10.540.10 37 158 4.8E-18 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS07385 b239634537cf8ed589c919f166702b3a 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 453 1.4E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS07385 b239634537cf8ed589c919f166702b3a 600 Gene3D G3DSA:1.20.140.10 268 460 4.2E-48 T 22-04-2016 R615_RS07385 b239634537cf8ed589c919f166702b3a 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 156 1.6E-13 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS07385 b239634537cf8ed589c919f166702b3a 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 473 593 8.8E-30 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain R615_RS07385 b239634537cf8ed589c919f166702b3a 600 SUPERFAMILY SSF47203 285 461 4.99E-44 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS07385 b239634537cf8ed589c919f166702b3a 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 4.7E-18 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 R615_RS07385 b239634537cf8ed589c919f166702b3a 600 PANTHER PTHR10909 1 480 1.2E-237 T 22-04-2016 R615_RS07385 b239634537cf8ed589c919f166702b3a 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 8.1E-10 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria R615_RS07385 b239634537cf8ed589c919f166702b3a 600 SUPERFAMILY SSF56645 39 278 4.45E-58 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 R615_RS17645 dffec02c39c16f2b916e8ba09390c162 281 Gene3D G3DSA:1.10.10.10 20 88 5.9E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS17645 dffec02c39c16f2b916e8ba09390c162 281 SMART SM00345 26 85 4.0E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS17645 dffec02c39c16f2b916e8ba09390c162 281 PANTHER PTHR11751:SF382 13 92 2.3E-12 T 22-04-2016 R615_RS17645 dffec02c39c16f2b916e8ba09390c162 281 PANTHER PTHR11751:SF382 226 244 2.3E-12 T 22-04-2016 R615_RS17645 dffec02c39c16f2b916e8ba09390c162 281 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 85 5.1E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS17645 dffec02c39c16f2b916e8ba09390c162 281 PANTHER PTHR11751 13 92 2.3E-12 T 22-04-2016 R615_RS17645 dffec02c39c16f2b916e8ba09390c162 281 PANTHER PTHR11751 226 244 2.3E-12 T 22-04-2016 R615_RS17645 dffec02c39c16f2b916e8ba09390c162 281 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 1.8E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS17645 dffec02c39c16f2b916e8ba09390c162 281 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 1.8E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS17645 dffec02c39c16f2b916e8ba09390c162 281 SUPERFAMILY SSF46785 20 89 4.05E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS06665 977e89d760141388c579f5a0f5f11870 294 SUPERFAMILY SSF103481 189 288 8.76E-8 T 22-04-2016 R615_RS06665 977e89d760141388c579f5a0f5f11870 294 PANTHER PTHR32322:SF9 1 286 1.3E-25 T 22-04-2016 R615_RS06665 977e89d760141388c579f5a0f5f11870 294 Pfam PF00892 EamA-like transporter family 156 288 2.2E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS06665 977e89d760141388c579f5a0f5f11870 294 PANTHER PTHR32322 1 286 1.3E-25 T 22-04-2016 R615_RS06665 977e89d760141388c579f5a0f5f11870 294 SUPERFAMILY SSF103481 43 145 5.17E-8 T 22-04-2016 R615_RS17665 5c7aa16ea2fcd479ce6650f75b76df57 302 Gene3D G3DSA:3.40.50.720 93 234 2.9E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS17665 5c7aa16ea2fcd479ce6650f75b76df57 302 Pfam PF04321 RmlD substrate binding domain 95 290 3.0E-21 T 22-04-2016 IPR029903 RmlD-like substrate binding domain R615_RS17665 5c7aa16ea2fcd479ce6650f75b76df57 302 SUPERFAMILY SSF51735 30 291 1.09E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09510 f60fbfa5cd84facda6adcdb7bcacd738 224 Pfam PF07722 Peptidase C26 48 201 1.2E-45 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 R615_RS09510 f60fbfa5cd84facda6adcdb7bcacd738 224 PANTHER PTHR11922:SF18 34 202 2.8E-35 T 22-04-2016 R615_RS09510 f60fbfa5cd84facda6adcdb7bcacd738 224 Gene3D G3DSA:3.40.50.880 48 220 2.9E-34 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS09510 f60fbfa5cd84facda6adcdb7bcacd738 224 SUPERFAMILY SSF52317 3 219 5.92E-36 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS09510 f60fbfa5cd84facda6adcdb7bcacd738 224 PANTHER PTHR11922 34 202 2.8E-35 T 22-04-2016 R615_RS04460 f5c79edc55d2fe4e587d4fc9ec372ced 239 SUPERFAMILY SSF160246 9 70 7.85E-12 T 22-04-2016 R615_RS04460 f5c79edc55d2fe4e587d4fc9ec372ced 239 PANTHER PTHR30258 1 112 2.6E-12 T 22-04-2016 R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 PANTHER PTHR11624:SF20 28 222 1.2E-285 T 22-04-2016 R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 PANTHER PTHR11624:SF20 245 623 1.2E-285 T 22-04-2016 R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 15 286 7.8E-119 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 14 624 44.433 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 Gene3D G3DSA:3.40.50.970 246 332 6.3E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 Gene3D G3DSA:3.40.50.970 31 205 6.3E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 SUPERFAMILY SSF52922 491 623 4.97E-26 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 PANTHER PTHR11624 28 222 1.2E-285 T 22-04-2016 IPR033247 Transketolase family R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 PANTHER PTHR11624 245 623 1.2E-285 T 22-04-2016 IPR033247 Transketolase family R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 Gene3D G3DSA:3.40.50.920 494 623 2.9E-29 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 SUPERFAMILY SSF52518 316 501 2.11E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 Pfam PF02780 Transketolase, C-terminal domain 506 615 5.5E-19 T 22-04-2016 IPR033248 Transketolase, C-terminal domain R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 ProSitePatterns PS00802 Transketolase signature 2. 424 440 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 17 623 5.7E-264 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 Gene3D G3DSA:3.40.50.970 333 481 6.1E-34 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 SUPERFAMILY SSF52518 247 380 4.51E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 SUPERFAMILY SSF52518 10 203 4.51E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 SMART SM00861 318 482 1.4E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain R615_RS14830 1d7e73f2563293ffaf0775e558d51a7e 627 Pfam PF02779 Transketolase, pyrimidine binding domain 317 477 2.3E-37 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain R615_RS09875 d709754ab1f4ed5d7bbd81e1451c0b01 403 SUPERFAMILY SSF53901 2 251 1.15E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS09875 d709754ab1f4ed5d7bbd81e1451c0b01 403 SMART SM00825 Beta-ketoacyl synthase 4 403 4.4E-13 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain R615_RS09875 d709754ab1f4ed5d7bbd81e1451c0b01 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site R615_RS09875 d709754ab1f4ed5d7bbd81e1451c0b01 403 Gene3D G3DSA:3.40.47.10 261 402 2.0E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS09875 d709754ab1f4ed5d7bbd81e1451c0b01 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 360 1.9E-28 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal R615_RS09875 d709754ab1f4ed5d7bbd81e1451c0b01 403 Gene3D G3DSA:3.40.47.10 2 255 1.1E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS09875 d709754ab1f4ed5d7bbd81e1451c0b01 403 PANTHER PTHR11712 1 402 6.9E-151 T 22-04-2016 R615_RS09875 d709754ab1f4ed5d7bbd81e1451c0b01 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.1E-43 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal R615_RS09875 d709754ab1f4ed5d7bbd81e1451c0b01 403 SUPERFAMILY SSF53901 213 401 1.11E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13290 130016f01ba991fc82f73c90e29ce243 549 Gene3D G3DSA:1.10.287.950 301 516 6.0E-55 T 22-04-2016 R615_RS13290 130016f01ba991fc82f73c90e29ce243 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 547 7.9E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS13290 130016f01ba991fc82f73c90e29ce243 549 SMART SM00283 287 548 3.8E-62 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS13290 130016f01ba991fc82f73c90e29ce243 549 SUPERFAMILY SSF58104 240 549 1.83E-72 T 22-04-2016 R615_RS13290 130016f01ba991fc82f73c90e29ce243 549 SMART SM00304 218 272 4.3E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS13290 130016f01ba991fc82f73c90e29ce243 549 PANTHER PTHR32089 146 176 4.6E-101 T 22-04-2016 R615_RS13290 130016f01ba991fc82f73c90e29ce243 549 PANTHER PTHR32089 192 549 4.6E-101 T 22-04-2016 R615_RS13290 130016f01ba991fc82f73c90e29ce243 549 Pfam PF00672 HAMP domain 200 268 6.0E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS13575 027cebeed9e33f31d089aa9b7b5dc235 668 SMART SM00304 338 390 3.7E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS13575 027cebeed9e33f31d089aa9b7b5dc235 668 Pfam PF00672 HAMP domain 321 387 2.9E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS13575 027cebeed9e33f31d089aa9b7b5dc235 668 Gene3D G3DSA:1.10.287.950 420 636 4.6E-49 T 22-04-2016 R615_RS13575 027cebeed9e33f31d089aa9b7b5dc235 668 SUPERFAMILY SSF58104 358 667 6.28E-64 T 22-04-2016 R615_RS13575 027cebeed9e33f31d089aa9b7b5dc235 668 PANTHER PTHR32089 7 668 6.4E-88 T 22-04-2016 R615_RS13575 027cebeed9e33f31d089aa9b7b5dc235 668 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 530 4.9E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS13575 027cebeed9e33f31d089aa9b7b5dc235 668 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 532 561 4.9E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS13575 027cebeed9e33f31d089aa9b7b5dc235 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 462 665 1.1E-44 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS13575 027cebeed9e33f31d089aa9b7b5dc235 668 SMART SM00283 405 666 5.3E-51 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS12535 2a2ea225aac287dd5099ddd16312c23a 147 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 133 2.7E-30 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC R615_RS12535 2a2ea225aac287dd5099ddd16312c23a 147 PIRSF PIRSF004923 1 144 1.2E-31 T 22-04-2016 IPR026268 Protein RseC R615_RS12535 2a2ea225aac287dd5099ddd16312c23a 147 PANTHER PTHR35867:SF1 3 134 6.7E-24 T 22-04-2016 R615_RS12535 2a2ea225aac287dd5099ddd16312c23a 147 PANTHER PTHR35867 3 134 6.7E-24 T 22-04-2016 R615_RS03035 34b37f5fc86770f37d60cb0d5097d2de 256 Gene3D G3DSA:3.30.70.1070 178 250 9.8E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 R615_RS03035 34b37f5fc86770f37d60cb0d5097d2de 256 PANTHER PTHR34183 21 254 1.8E-76 T 22-04-2016 R615_RS03035 34b37f5fc86770f37d60cb0d5097d2de 256 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 78 247 1.3E-47 T 22-04-2016 IPR012997 Rare lipoprotein A R615_RS03035 34b37f5fc86770f37d60cb0d5097d2de 256 Gene3D G3DSA:2.40.40.10 116 169 4.1E-5 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain R615_RS03035 34b37f5fc86770f37d60cb0d5097d2de 256 PANTHER PTHR34183:SF1 21 254 1.8E-76 T 22-04-2016 R615_RS03035 34b37f5fc86770f37d60cb0d5097d2de 256 Pfam PF03330 Lytic transglycolase 77 165 1.7E-26 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain R615_RS03035 34b37f5fc86770f37d60cb0d5097d2de 256 SUPERFAMILY SSF110997 176 250 3.92E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 R615_RS03035 34b37f5fc86770f37d60cb0d5097d2de 256 SUPERFAMILY SSF50685 69 168 1.29E-10 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain R615_RS03035 34b37f5fc86770f37d60cb0d5097d2de 256 Pfam PF05036 Sporulation related domain 178 245 1.9E-8 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 R615_RS05775 0cedddd4b7204663e589fd80d20a3dae 119 Gene3D G3DSA:2.60.300.12 14 108 5.6E-26 T 22-04-2016 IPR000361 FeS cluster biogenesis R615_RS05775 0cedddd4b7204663e589fd80d20a3dae 119 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 14 119 2.3E-30 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 R615_RS05775 0cedddd4b7204663e589fd80d20a3dae 119 SUPERFAMILY SSF89360 14 108 1.39E-23 T 22-04-2016 IPR000361 FeS cluster biogenesis R615_RS05775 0cedddd4b7204663e589fd80d20a3dae 119 PANTHER PTHR10072 9 119 7.3E-31 T 22-04-2016 R615_RS05775 0cedddd4b7204663e589fd80d20a3dae 119 Pfam PF01521 Iron-sulphur cluster biosynthesis 14 115 1.2E-19 T 22-04-2016 IPR000361 FeS cluster biogenesis R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 SUPERFAMILY SSF51206 13 138 4.84E-34 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 72 91 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 PANTHER PTHR24567:SF27 13 209 6.2E-118 T 22-04-2016 R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 Gene3D G3DSA:2.60.120.10 13 138 6.5E-36 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 Pfam PF00027 Cyclic nucleotide-binding domain 23 111 1.0E-23 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 184 199 1.9E-8 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 168 184 1.9E-8 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 Gene3D G3DSA:1.10.10.10 141 209 4.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 SUPERFAMILY SSF46785 141 209 6.07E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 PRINTS PR00103 cAMP-dependent protein kinase signature 40 54 8.6E-7 T 22-04-2016 R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 PRINTS PR00103 cAMP-dependent protein kinase signature 70 79 8.6E-7 T 22-04-2016 R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 PRINTS PR00103 cAMP-dependent protein kinase signature 25 39 8.6E-7 T 22-04-2016 R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 PRINTS PR00103 cAMP-dependent protein kinase signature 143 155 8.6E-7 T 22-04-2016 R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 PRINTS PR00103 cAMP-dependent protein kinase signature 84 95 8.6E-7 T 22-04-2016 R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 SMART SM00100 3 124 1.8E-22 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 SMART SM00419 162 210 7.8E-14 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 ProSitePatterns PS00042 Crp-type HTH domain signature. 170 193 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 PANTHER PTHR24567 13 209 6.2E-118 T 22-04-2016 R615_RS13855 dd89c7b2b5ddc4102c6fe00f14f2f572 212 Pfam PF00325 Bacterial regulatory proteins, crp family 168 199 3.8E-14 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 R615_RS03315 f7ad6191bd09b5634a25fe5e838d81cd 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 23 240 4.1E-67 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase R615_RS03315 f7ad6191bd09b5634a25fe5e838d81cd 243 PANTHER PTHR30616:SF3 7 243 9.8E-92 T 22-04-2016 R615_RS03315 f7ad6191bd09b5634a25fe5e838d81cd 243 SUPERFAMILY SSF64438 6 242 2.38E-71 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic R615_RS03315 f7ad6191bd09b5634a25fe5e838d81cd 243 PANTHER PTHR30616 7 243 9.8E-92 T 22-04-2016 R615_RS03315 f7ad6191bd09b5634a25fe5e838d81cd 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 241 3.5E-49 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase R615_RS03315 f7ad6191bd09b5634a25fe5e838d81cd 243 Gene3D G3DSA:3.60.140.10 6 242 2.6E-80 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase R615_RS10920 eced3dff56167c0a2b0c0713fadccca6 626 Pfam PF13387 Domain of unknown function (DUF4105) 128 299 1.3E-57 T 22-04-2016 IPR025178 Domain of unknown function DUF4105 R615_RS03330 ecd708134da7f3e97eacf046fb52f4b3 216 PANTHER PTHR11237 6 216 8.9E-105 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 R615_RS03330 ecd708134da7f3e97eacf046fb52f4b3 216 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 56 214 7.7E-35 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 R615_RS03330 ecd708134da7f3e97eacf046fb52f4b3 216 PANTHER PTHR11237:SF3 6 216 8.9E-105 T 22-04-2016 R615_RS03330 ecd708134da7f3e97eacf046fb52f4b3 216 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 15 216 28.072 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 R615_RS03330 ecd708134da7f3e97eacf046fb52f4b3 216 Gene3D G3DSA:1.20.1260.10 51 183 2.6E-10 T 22-04-2016 IPR012347 Ferritin-related R615_RS03330 ecd708134da7f3e97eacf046fb52f4b3 216 SUPERFAMILY SSF47240 49 131 7.22E-16 T 22-04-2016 IPR009078 Ferritin-like superfamily R615_RS01180 f4310a36d5075d3b3fb648a386edec13 917 PIRSF PIRSF001444 9 812 1.0E-194 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 R615_RS01180 f4310a36d5075d3b3fb648a386edec13 917 PANTHER PTHR38760 10 846 7.8E-180 T 22-04-2016 R615_RS01180 f4310a36d5075d3b3fb648a386edec13 917 Pfam PF12633 Adenylate cyclase NT domain 15 206 1.9E-72 T 22-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 R615_RS01180 f4310a36d5075d3b3fb648a386edec13 917 Pfam PF01295 Adenylate cyclase, class-I 233 762 1.2E-98 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 333 458 3.6E-15 T 22-04-2016 IPR000014 PAS domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 SUPERFAMILY SSF55073 467 626 1.73E-48 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 SUPERFAMILY SSF55785 258 329 1.92E-13 T 22-04-2016 IPR000014 PAS domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 SMART SM00091 213 281 73.0 T 22-04-2016 IPR000014 PAS domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 SMART SM00091 337 403 2.0E-8 T 22-04-2016 IPR000014 PAS domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 SUPERFAMILY SSF55785 342 449 6.46E-24 T 22-04-2016 IPR000014 PAS domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 Pfam PF13426 PAS domain 348 449 1.6E-11 T 22-04-2016 IPR000014 PAS domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 SMART SM00052 634 881 9.5E-109 T 22-04-2016 IPR001633 EAL domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 Gene3D G3DSA:3.30.450.20 334 445 1.2E-25 T 22-04-2016 R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 SMART SM00267 451 624 6.8E-67 T 22-04-2016 IPR000160 GGDEF domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 Pfam PF08447 PAS fold 254 321 1.4E-9 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 458 622 8.0E-46 T 22-04-2016 IPR000160 GGDEF domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 Gene3D G3DSA:3.20.20.450 637 882 3.8E-94 T 22-04-2016 IPR001633 EAL domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 Pfam PF00990 Diguanylate cyclase, GGDEF domain 463 620 3.9E-48 T 22-04-2016 IPR000160 GGDEF domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 SUPERFAMILY SSF141868 643 882 1.7E-85 T 22-04-2016 IPR001633 EAL domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 PANTHER PTHR10799 495 735 2.6E-77 T 22-04-2016 R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 PANTHER PTHR10799 7 146 2.6E-77 T 22-04-2016 R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 PANTHER PTHR10799:SF774 495 735 2.6E-77 T 22-04-2016 R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 PANTHER PTHR10799:SF774 7 146 2.6E-77 T 22-04-2016 R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 SMART SM00086 409 451 4.7E-4 T 22-04-2016 IPR001610 PAC motif R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 SMART SM00086 287 329 3.9E-5 T 22-04-2016 IPR001610 PAC motif R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 Pfam PF00563 EAL domain 640 876 1.1E-74 T 22-04-2016 IPR001633 EAL domain R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 Gene3D G3DSA:3.30.70.270 464 631 4.0E-57 T 22-04-2016 R615_RS04105 1d6cdae003bdc1dfd86f992fa07681c3 890 Gene3D G3DSA:3.30.450.20 200 333 2.5E-20 T 22-04-2016 R615_RS15985 efe198539b73271effdd0ce1aa27800a 230 PANTHER PTHR34265 79 220 5.6E-27 T 22-04-2016 R615_RS15985 efe198539b73271effdd0ce1aa27800a 230 Pfam PF03309 Type III pantothenate kinase 1 185 8.4E-35 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 R615_RS15985 efe198539b73271effdd0ce1aa27800a 230 SUPERFAMILY SSF53067 103 221 1.13E-23 T 22-04-2016 R615_RS15985 efe198539b73271effdd0ce1aa27800a 230 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 23 223 1.8E-28 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 R615_RS15985 efe198539b73271effdd0ce1aa27800a 230 SUPERFAMILY SSF53067 1 98 1.1E-11 T 22-04-2016 R615_RS15985 efe198539b73271effdd0ce1aa27800a 230 Gene3D G3DSA:3.30.420.40 76 224 2.8E-36 T 22-04-2016 R615_RS03065 656fe367622c3dec7c5dfecd789072fd 214 Gene3D G3DSA:3.40.50.620 9 214 2.8E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS03065 656fe367622c3dec7c5dfecd789072fd 214 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 8 214 28.604 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 R615_RS03065 656fe367622c3dec7c5dfecd789072fd 214 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 12 213 4.2E-52 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 R615_RS03065 656fe367622c3dec7c5dfecd789072fd 214 SUPERFAMILY SSF52374 10 214 6.22E-51 T 22-04-2016 R615_RS03065 656fe367622c3dec7c5dfecd789072fd 214 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 11 70 4.3E-12 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 R615_RS03065 656fe367622c3dec7c5dfecd789072fd 214 Pfam PF01467 Cytidylyltransferase-like 12 188 4.7E-30 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 R615_RS03065 656fe367622c3dec7c5dfecd789072fd 214 PANTHER PTHR12039 11 214 8.1E-52 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 R615_RS16565 4a7f8452dcda1c69fe0f84733ec72137 292 SUPERFAMILY SSF109604 13 279 7.53E-60 T 22-04-2016 R615_RS16565 4a7f8452dcda1c69fe0f84733ec72137 292 Pfam PF08668 HDOD domain 19 211 1.1E-48 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS16565 4a7f8452dcda1c69fe0f84733ec72137 292 PANTHER PTHR33525:SF3 6 283 3.4E-42 T 22-04-2016 R615_RS16565 4a7f8452dcda1c69fe0f84733ec72137 292 PANTHER PTHR33525 6 283 3.4E-42 T 22-04-2016 R615_RS16565 4a7f8452dcda1c69fe0f84733ec72137 292 Gene3D G3DSA:1.10.3150.10 13 279 3.6E-68 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 Gene3D G3DSA:3.40.50.300 138 312 1.5E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 Pfam PF00158 Sigma-54 interaction domain 140 306 2.1E-71 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 Pfam PF00072 Response regulator receiver domain 4 108 3.2E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 Gene3D G3DSA:1.10.10.10 430 460 1.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 SUPERFAMILY SSF52540 139 381 1.41E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 Gene3D G3DSA:3.40.50.2300 1 122 1.9E-29 T 22-04-2016 R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 PANTHER PTHR32071 1 466 1.1E-196 T 22-04-2016 R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 SMART SM00448 2 108 3.0E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 Gene3D G3DSA:1.10.8.60 314 385 6.0E-22 T 22-04-2016 R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 SUPERFAMILY SSF52172 2 183 3.27E-34 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 SMART SM00382 160 303 2.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site R615_RS02565 47fc23e2cda841fac9960e608d1b6ae4 469 PANTHER PTHR32071:SF18 1 466 1.1E-196 T 22-04-2016 R615_RS13880 c00dffa14f2c30d1384636b1250b8060 223 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 9 204 3.8E-30 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial R615_RS13880 c00dffa14f2c30d1384636b1250b8060 223 SUPERFAMILY SSF56784 7 213 2.52E-22 T 22-04-2016 IPR023214 HAD-like domain R615_RS13880 c00dffa14f2c30d1384636b1250b8060 223 PANTHER PTHR10000:SF10 8 215 3.5E-22 T 22-04-2016 R615_RS13880 c00dffa14f2c30d1384636b1250b8060 223 PANTHER PTHR10000 8 215 3.5E-22 T 22-04-2016 R615_RS13880 c00dffa14f2c30d1384636b1250b8060 223 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 8 194 2.1E-15 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 R615_RS13880 c00dffa14f2c30d1384636b1250b8060 223 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 192 3.5E-25 T 22-04-2016 R615_RS13880 c00dffa14f2c30d1384636b1250b8060 223 Gene3D G3DSA:3.40.50.1000 82 222 6.6E-32 T 22-04-2016 IPR023214 HAD-like domain R615_RS09650 dbc58026f47fb6f492bc9bd7d52ef8a2 274 PANTHER PTHR11142 5 263 7.3E-93 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS09650 dbc58026f47fb6f492bc9bd7d52ef8a2 274 PIRSF PIRSF001430 4 260 3.3E-75 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS09650 dbc58026f47fb6f492bc9bd7d52ef8a2 274 Pfam PF01416 tRNA pseudouridine synthase 9 108 4.7E-10 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS09650 dbc58026f47fb6f492bc9bd7d52ef8a2 274 Pfam PF01416 tRNA pseudouridine synthase 148 250 4.6E-30 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS09650 dbc58026f47fb6f492bc9bd7d52ef8a2 274 Gene3D G3DSA:3.30.70.580 3 110 2.9E-34 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS09650 dbc58026f47fb6f492bc9bd7d52ef8a2 274 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 5 249 34.516 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS09650 dbc58026f47fb6f492bc9bd7d52ef8a2 274 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 6 243 1.3E-68 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS09650 dbc58026f47fb6f492bc9bd7d52ef8a2 274 SUPERFAMILY SSF55120 3 260 2.73E-86 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS09650 dbc58026f47fb6f492bc9bd7d52ef8a2 274 Gene3D G3DSA:3.30.70.660 112 248 2.8E-46 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS04075 7c260eea3429949c0950318137f0aef2 390 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 388 1.2E-160 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 R615_RS04075 7c260eea3429949c0950318137f0aef2 390 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 384 9.3E-170 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 R615_RS04075 7c260eea3429949c0950318137f0aef2 390 PANTHER PTHR35806 1 390 1.0E-190 T 22-04-2016 R615_RS04075 7c260eea3429949c0950318137f0aef2 390 PIRSF PIRSF015658 1 390 9.2E-176 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 R615_RS15765 b8ee101f3fab47bc3a8b569249d40ef9 129 SUPERFAMILY SSF53137 15 129 1.7E-47 T 22-04-2016 R615_RS15765 b8ee101f3fab47bc3a8b569249d40ef9 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.847 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 R615_RS15765 b8ee101f3fab47bc3a8b569249d40ef9 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site R615_RS15765 b8ee101f3fab47bc3a8b569249d40ef9 129 PIRSF PIRSF002131 1 129 1.9E-53 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 R615_RS15765 b8ee101f3fab47bc3a8b569249d40ef9 129 Gene3D G3DSA:3.30.420.80 9 129 1.4E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 R615_RS15765 b8ee101f3fab47bc3a8b569249d40ef9 129 PANTHER PTHR11759 11 129 2.6E-72 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 R615_RS15765 b8ee101f3fab47bc3a8b569249d40ef9 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 5.3E-56 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15765 b8ee101f3fab47bc3a8b569249d40ef9 129 Pfam PF00411 Ribosomal protein S11 19 128 2.1E-51 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 R615_RS14700 8ca12a6eab6081f69ff5e6e8238d7852 335 Gene3D G3DSA:3.20.20.30 7 328 4.3E-82 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 R615_RS14700 8ca12a6eab6081f69ff5e6e8238d7852 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 329 1.8E-117 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 R615_RS14700 8ca12a6eab6081f69ff5e6e8238d7852 335 PANTHER PTHR30137:SF2 1 328 1.8E-120 T 22-04-2016 R615_RS14700 8ca12a6eab6081f69ff5e6e8238d7852 335 PANTHER PTHR30137 1 328 1.8E-120 T 22-04-2016 R615_RS14700 8ca12a6eab6081f69ff5e6e8238d7852 335 Pfam PF00296 Luciferase-like monooxygenase 21 299 2.6E-36 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 R615_RS14700 8ca12a6eab6081f69ff5e6e8238d7852 335 SUPERFAMILY SSF51679 7 328 1.44E-76 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 R615_RS05985 d5d39e29a69443c8ac71cb3996d8ca88 291 PANTHER PTHR36838 1 291 6.1E-78 T 22-04-2016 R615_RS05985 d5d39e29a69443c8ac71cb3996d8ca88 291 Pfam PF03547 Membrane transport protein 3 125 1.2E-6 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 R615_RS05985 d5d39e29a69443c8ac71cb3996d8ca88 291 Pfam PF03547 Membrane transport protein 147 286 7.7E-13 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 R615_RS05985 d5d39e29a69443c8ac71cb3996d8ca88 291 PANTHER PTHR36838:SF2 1 291 6.1E-78 T 22-04-2016 R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 Gene3D G3DSA:3.30.1490.20 128 200 8.6E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 PANTHER PTHR18866 1 467 4.6E-278 T 22-04-2016 R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 SMART SM00878 334 440 1.9E-58 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 Pfam PF02785 Biotin carboxylase C-terminal domain 334 439 5.0E-39 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 1.2E-41 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 Gene3D G3DSA:3.30.470.20 203 446 6.9E-95 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 SUPERFAMILY SSF56059 82 346 7.42E-68 T 22-04-2016 R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 SUPERFAMILY SSF51246 329 446 2.41E-41 T 22-04-2016 IPR011054 Rudiment single hybrid motif R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 Gene3D G3DSA:3.40.50.20 1 127 1.0E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 SUPERFAMILY SSF52440 1 112 1.73E-42 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 320 8.2E-74 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS14630 fd14183c0ba6d380afcb0e8d23fcbca1 471 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS17465 a22373a78516c19e3632f0f862d1d69b 322 PANTHER PTHR23083 230 308 2.0E-13 T 22-04-2016 R615_RS17465 a22373a78516c19e3632f0f862d1d69b 322 PANTHER PTHR23083 47 104 2.0E-13 T 22-04-2016 R615_RS17465 a22373a78516c19e3632f0f862d1d69b 322 SMART SM00028 40 73 19.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS17465 a22373a78516c19e3632f0f862d1d69b 322 SMART SM00028 267 301 130.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS17465 a22373a78516c19e3632f0f862d1d69b 322 SMART SM00028 233 266 17.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS17465 a22373a78516c19e3632f0f862d1d69b 322 SMART SM00028 74 107 36.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS17465 a22373a78516c19e3632f0f862d1d69b 322 Pfam PF13414 TPR repeat 244 277 1.6E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS17465 a22373a78516c19e3632f0f862d1d69b 322 Gene3D G3DSA:1.25.40.10 42 149 1.2E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS17465 a22373a78516c19e3632f0f862d1d69b 322 Gene3D G3DSA:1.25.40.10 235 306 1.2E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS17465 a22373a78516c19e3632f0f862d1d69b 322 SUPERFAMILY SSF48452 44 97 1.44E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS17465 a22373a78516c19e3632f0f862d1d69b 322 SUPERFAMILY SSF48452 247 307 1.44E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS17465 a22373a78516c19e3632f0f862d1d69b 322 Pfam PF13432 Tetratricopeptide repeat 44 97 1.1E-5 T 22-04-2016 R615_RS06240 acb6bfe0fd52ac476627748c61d06383 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 34.066 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 R615_RS06240 acb6bfe0fd52ac476627748c61d06383 193 PANTHER PTHR11241:SF1 77 192 9.6E-60 T 22-04-2016 R615_RS06240 acb6bfe0fd52ac476627748c61d06383 193 PANTHER PTHR11241:SF1 1 58 9.6E-60 T 22-04-2016 R615_RS06240 acb6bfe0fd52ac476627748c61d06383 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 4.2E-62 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 R615_RS06240 acb6bfe0fd52ac476627748c61d06383 193 Gene3D G3DSA:2.70.40.10 1 192 1.1E-57 T 22-04-2016 IPR029054 dUTPase-like R615_RS06240 acb6bfe0fd52ac476627748c61d06383 193 PANTHER PTHR11241 77 192 9.6E-60 T 22-04-2016 R615_RS06240 acb6bfe0fd52ac476627748c61d06383 193 PANTHER PTHR11241 1 58 9.6E-60 T 22-04-2016 R615_RS06240 acb6bfe0fd52ac476627748c61d06383 193 Pfam PF00692 dUTPase 76 186 1.0E-11 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 R615_RS06240 acb6bfe0fd52ac476627748c61d06383 193 SUPERFAMILY SSF51283 1 193 1.05E-57 T 22-04-2016 IPR029054 dUTPase-like R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1080 1092 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Pfam PF04560 RNA polymerase Rpb2, domain 7 1281 1355 4.8E-27 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Gene3D G3DSA:3.90.1110.10 351 449 4.1E-67 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Gene3D G3DSA:3.90.1110.10 157 234 4.1E-67 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 SUPERFAMILY SSF64484 1056 1357 0.0 T 22-04-2016 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 SUPERFAMILY SSF64484 11 230 0.0 T 22-04-2016 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 SUPERFAMILY SSF64484 348 944 0.0 T 22-04-2016 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Gene3D G3DSA:2.40.50.100 719 797 2.1E-31 T 22-04-2016 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Pfam PF04565 RNA polymerase Rpb2, domain 3 518 585 2.8E-29 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Gene3D G3DSA:2.40.270.10 798 825 1.8E-85 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Gene3D G3DSA:2.40.270.10 1077 1257 1.8E-85 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Pfam PF04563 RNA polymerase beta subunit 26 504 7.3E-43 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1357 12.297 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 PANTHER PTHR20856 1051 1145 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 PANTHER PTHR20856 1197 1358 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 PANTHER PTHR20856 345 730 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 PANTHER PTHR20856 748 935 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 PANTHER PTHR20856 5 235 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Gene3D G3DSA:2.30.150.10 597 661 5.5E-23 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Pfam PF10385 RNA polymerase beta subunit external 1 domain 596 661 1.5E-20 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Gene3D G3DSA:3.90.1100.10 664 718 8.2E-150 T 22-04-2016 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Gene3D G3DSA:3.90.1100.10 20 155 8.2E-150 T 22-04-2016 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Gene3D G3DSA:3.90.1100.10 450 596 8.2E-150 T 22-04-2016 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 230 3.9E-8 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Pfam PF04561 RNA polymerase Rpb2, domain 2 354 459 7.9E-18 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Pfam PF00562 RNA polymerase Rpb2, domain 6 722 1279 2.0E-158 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Gene3D G3DSA:2.40.50.150 1062 1076 2.6E-55 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 Gene3D G3DSA:2.40.50.150 833 942 2.6E-55 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 PANTHER PTHR20856:SF20 1051 1145 0.0 T 22-04-2016 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 PANTHER PTHR20856:SF20 1197 1358 0.0 T 22-04-2016 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 PANTHER PTHR20856:SF20 345 730 0.0 T 22-04-2016 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 PANTHER PTHR20856:SF20 748 935 0.0 T 22-04-2016 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 PANTHER PTHR20856:SF20 5 235 0.0 T 22-04-2016 R615_RS15910 37837c9220c91a6af20650a358a3b969 1358 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1354 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS17555 2550c9c589c147754843430e550b84fe 118 PANTHER PTHR34386:SF1 1 118 8.2E-14 T 22-04-2016 R615_RS17555 2550c9c589c147754843430e550b84fe 118 Gene3D G3DSA:3.40.30.10 21 54 6.9E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS17555 2550c9c589c147754843430e550b84fe 118 Gene3D G3DSA:3.40.30.10 55 116 2.6E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS17555 2550c9c589c147754843430e550b84fe 118 PANTHER PTHR34386 1 118 8.2E-14 T 22-04-2016 R615_RS17555 2550c9c589c147754843430e550b84fe 118 Pfam PF00462 Glutaredoxin 45 103 3.4E-11 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 R615_RS17555 2550c9c589c147754843430e550b84fe 118 SUPERFAMILY SSF52833 44 115 1.73E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS03705 0642fedcd350740076b772ca9c138513 598 SUPERFAMILY SSF47203 286 471 1.21E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS03705 0642fedcd350740076b772ca9c138513 598 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 453 5.7E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS03705 0642fedcd350740076b772ca9c138513 598 Gene3D G3DSA:1.20.140.10 269 461 2.1E-50 T 22-04-2016 R615_RS03705 0642fedcd350740076b772ca9c138513 598 Gene3D G3DSA:1.10.540.10 40 158 3.7E-20 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS03705 0642fedcd350740076b772ca9c138513 598 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 47 157 2.2E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS03705 0642fedcd350740076b772ca9c138513 598 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 2.8E-17 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 R615_RS03705 0642fedcd350740076b772ca9c138513 598 Gene3D G3DSA:2.40.110.10 160 268 2.2E-25 T 22-04-2016 R615_RS03705 0642fedcd350740076b772ca9c138513 598 PANTHER PTHR10909:SF296 4 475 5.5E-247 T 22-04-2016 R615_RS03705 0642fedcd350740076b772ca9c138513 598 PANTHER PTHR10909 4 475 5.5E-247 T 22-04-2016 R615_RS03705 0642fedcd350740076b772ca9c138513 598 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 589 4.8E-29 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain R615_RS03705 0642fedcd350740076b772ca9c138513 598 SUPERFAMILY SSF56645 39 278 7.07E-59 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 R615_RS03705 0642fedcd350740076b772ca9c138513 598 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 29 5.3E-8 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria R615_RS07520 831f79b03b42d784589103daf88c8d50 283 PANTHER PTHR11807:SF16 1 268 3.5E-114 T 22-04-2016 R615_RS07520 831f79b03b42d784589103daf88c8d50 283 Pfam PF01171 PP-loop family 41 203 2.8E-14 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal R615_RS07520 831f79b03b42d784589103daf88c8d50 283 PIRSF PIRSF004976 3 275 4.4E-74 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 R615_RS07520 831f79b03b42d784589103daf88c8d50 283 Gene3D G3DSA:3.40.50.620 22 205 8.8E-24 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS07520 831f79b03b42d784589103daf88c8d50 283 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 9 270 56.767 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 R615_RS07520 831f79b03b42d784589103daf88c8d50 283 SUPERFAMILY SSF52402 16 234 2.05E-56 T 22-04-2016 R615_RS07520 831f79b03b42d784589103daf88c8d50 283 PANTHER PTHR11807 1 268 3.5E-114 T 22-04-2016 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 Pfam PF00593 TonB dependent receptor 514 736 3.7E-7 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 Gene3D G3DSA:2.170.130.10 49 173 4.6E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 Gene3D G3DSA:2.40.170.20 432 739 4.2E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 Gene3D G3DSA:2.40.170.20 360 361 4.2E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 Gene3D G3DSA:2.40.170.20 174 317 4.2E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 170 1.4E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 PANTHER PTHR32552:SF31 410 548 1.5E-34 T 22-04-2016 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 PANTHER PTHR32552:SF31 571 704 1.5E-34 T 22-04-2016 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 PANTHER PTHR32552:SF31 49 345 1.5E-34 T 22-04-2016 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 PANTHER PTHR32552 410 548 1.5E-34 T 22-04-2016 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 PANTHER PTHR32552 571 704 1.5E-34 T 22-04-2016 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 PANTHER PTHR32552 49 345 1.5E-34 T 22-04-2016 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 SUPERFAMILY SSF56935 412 543 3.11E-61 T 22-04-2016 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 SUPERFAMILY SSF56935 49 335 3.11E-61 T 22-04-2016 R615_RS17670 da303cbf3aeecd697dfe096214222f58 778 SUPERFAMILY SSF56935 573 719 3.11E-61 T 22-04-2016 R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 PANTHER PTHR30404:SF1 1 397 6.6E-103 T 22-04-2016 R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 SUPERFAMILY SSF54106 390 434 5.1E-10 T 22-04-2016 IPR018392 LysM domain R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 SUPERFAMILY SSF53187 293 369 1.76E-53 T 22-04-2016 R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 SUPERFAMILY SSF53187 149 245 1.76E-53 T 22-04-2016 R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 SMART SM00646 211 366 1.1E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 Gene3D G3DSA:3.40.630.40 149 246 1.2E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 Gene3D G3DSA:3.40.630.40 294 370 1.2E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 SMART SM00257 391 434 1.3E-15 T 22-04-2016 IPR018392 LysM domain R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 Pfam PF01476 LysM domain 392 434 1.8E-13 T 22-04-2016 IPR018392 LysM domain R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 Pfam PF11741 AMIN domain 24 124 1.3E-17 T 22-04-2016 IPR021731 AMIN domain R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 PANTHER PTHR30404 1 397 6.6E-103 T 22-04-2016 R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 151 366 4.8E-49 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 R615_RS02430 a3764da37c8a2ba55f35f4153ccaf1be 436 Gene3D G3DSA:3.10.350.10 389 435 2.8E-16 T 22-04-2016 IPR018392 LysM domain R615_RS01920 bd910c60681601ffd0b85d692d7e7139 511 Gene3D G3DSA:2.40.170.20 494 511 7.0E-9 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS01920 bd910c60681601ffd0b85d692d7e7139 511 Gene3D G3DSA:2.40.170.20 349 440 7.0E-9 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS01920 bd910c60681601ffd0b85d692d7e7139 511 Gene3D G3DSA:2.40.170.20 217 270 7.0E-9 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS09795 7a19da0246821f8386d0d04beb88d9a7 236 Gene3D G3DSA:3.10.20.30 3 105 2.9E-32 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS09795 7a19da0246821f8386d0d04beb88d9a7 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 6.7E-9 T 22-04-2016 R615_RS09795 7a19da0246821f8386d0d04beb88d9a7 236 SUPERFAMILY SSF46548 106 233 4.88E-39 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 R615_RS09795 7a19da0246821f8386d0d04beb88d9a7 236 SUPERFAMILY SSF54292 3 105 3.68E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS09795 7a19da0246821f8386d0d04beb88d9a7 236 PANTHER PTHR11921:SF29 4 232 4.3E-124 T 22-04-2016 R615_RS09795 7a19da0246821f8386d0d04beb88d9a7 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 228 6.7E-83 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 R615_RS09795 7a19da0246821f8386d0d04beb88d9a7 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 3 109 8.4E-30 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 R615_RS09795 7a19da0246821f8386d0d04beb88d9a7 236 PANTHER PTHR11921 4 232 4.3E-124 T 22-04-2016 R615_RS09795 7a19da0246821f8386d0d04beb88d9a7 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site R615_RS09795 7a19da0246821f8386d0d04beb88d9a7 236 Gene3D G3DSA:1.10.1060.10 106 235 1.7E-46 T 22-04-2016 R615_RS05450 e9d7c938156493458aa163862994b357 371 Pfam PF00962 Adenosine/AMP deaminase 46 362 1.3E-68 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 R615_RS05450 e9d7c938156493458aa163862994b357 371 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 46 363 1.4E-109 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 R615_RS05450 e9d7c938156493458aa163862994b357 371 Hamap MF_01962 Adenine deaminase. 42 354 84.668 T 22-04-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 R615_RS05450 e9d7c938156493458aa163862994b357 371 SUPERFAMILY SSF51556 42 365 8.63E-90 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS05450 e9d7c938156493458aa163862994b357 371 PANTHER PTHR11409:SF41 40 366 1.6E-159 T 22-04-2016 R615_RS05450 e9d7c938156493458aa163862994b357 371 PANTHER PTHR11409 40 366 1.6E-159 T 22-04-2016 R615_RS05450 e9d7c938156493458aa163862994b357 371 Gene3D G3DSA:3.20.20.140 41 366 2.8E-101 T 22-04-2016 R615_RS00390 ba82f6253a4386b84fd5ad257776bbf4 519 Gene3D G3DSA:3.50.50.60 44 173 7.0E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00390 ba82f6253a4386b84fd5ad257776bbf4 519 Gene3D G3DSA:3.50.50.60 236 346 7.0E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00390 ba82f6253a4386b84fd5ad257776bbf4 519 Gene3D G3DSA:3.50.50.60 424 514 7.0E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00390 ba82f6253a4386b84fd5ad257776bbf4 519 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 27 2.3E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal R615_RS00390 ba82f6253a4386b84fd5ad257776bbf4 519 PANTHER PTHR10668:SF68 44 512 2.9E-65 T 22-04-2016 R615_RS00390 ba82f6253a4386b84fd5ad257776bbf4 519 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 25 8.9E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal R615_RS00390 ba82f6253a4386b84fd5ad257776bbf4 519 Pfam PF05199 GMC oxidoreductase 449 510 1.0E-14 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 R615_RS00390 ba82f6253a4386b84fd5ad257776bbf4 519 SUPERFAMILY SSF51905 44 355 1.62E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00390 ba82f6253a4386b84fd5ad257776bbf4 519 SUPERFAMILY SSF51905 462 516 1.62E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00390 ba82f6253a4386b84fd5ad257776bbf4 519 Pfam PF00732 GMC oxidoreductase 44 321 3.9E-8 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 R615_RS00390 ba82f6253a4386b84fd5ad257776bbf4 519 PANTHER PTHR10668 44 512 2.9E-65 T 22-04-2016 R615_RS00390 ba82f6253a4386b84fd5ad257776bbf4 519 SUPERFAMILY SSF54373 337 462 1.96E-10 T 22-04-2016 R615_RS13410 fe78cddfd06c264747bbbe088b8caf1d 266 Pfam PF01026 TatD related DNase 17 265 8.8E-72 T 22-04-2016 IPR001130 TatD family GO:0016788 R615_RS13410 fe78cddfd06c264747bbbe088b8caf1d 266 PANTHER PTHR10060 5 263 1.2E-91 T 22-04-2016 IPR001130 TatD family GO:0016788 R615_RS13410 fe78cddfd06c264747bbbe088b8caf1d 266 PIRSF PIRSF005902 1 266 3.4E-78 T 22-04-2016 IPR001130 TatD family GO:0016788 R615_RS13410 fe78cddfd06c264747bbbe088b8caf1d 266 SUPERFAMILY SSF51556 15 265 1.13E-84 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS13410 fe78cddfd06c264747bbbe088b8caf1d 266 Gene3D G3DSA:3.20.20.140 9 265 2.4E-88 T 22-04-2016 R615_RS13410 fe78cddfd06c264747bbbe088b8caf1d 266 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 15 265 2.2E-76 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 R615_RS13410 fe78cddfd06c264747bbbe088b8caf1d 266 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 136 146 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 R615_RS13410 fe78cddfd06c264747bbbe088b8caf1d 266 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 202 218 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 R615_RS12570 cd6955608bce2ad9ff598a1dd0e85890 312 Pfam PF01571 Aminomethyltransferase folate-binding domain 34 140 7.5E-11 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal R615_RS12570 cd6955608bce2ad9ff598a1dd0e85890 312 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 178 243 1.8E-23 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site R615_RS12570 cd6955608bce2ad9ff598a1dd0e85890 312 PANTHER PTHR22602:SF0 12 244 1.2E-39 T 22-04-2016 R615_RS12570 cd6955608bce2ad9ff598a1dd0e85890 312 PANTHER PTHR22602 12 244 1.2E-39 T 22-04-2016 R615_RS12570 cd6955608bce2ad9ff598a1dd0e85890 312 SUPERFAMILY SSF103025 30 234 3.45E-52 T 22-04-2016 R615_RS12570 cd6955608bce2ad9ff598a1dd0e85890 312 Gene3D G3DSA:3.30.70.1400 35 117 4.8E-30 T 22-04-2016 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 PANTHER PTHR23355 3 594 8.4E-262 T 22-04-2016 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 PANTHER PTHR23355 617 819 8.4E-262 T 22-04-2016 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 Pfam PF08206 Ribonuclease B OB domain 86 142 2.3E-20 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 ProSitePatterns PS01175 Ribonuclease II family signature. 563 587 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 TIGRFAM TIGR02063 RNase_R: ribonuclease R 18 741 4.9E-262 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 SUPERFAMILY SSF50249 658 740 1.19E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 Pfam PF00773 RNB domain 258 594 2.1E-108 T 22-04-2016 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 SUPERFAMILY SSF50249 136 235 5.71E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 SUPERFAMILY SSF50249 218 658 1.34E-142 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 SMART SM00357 85 143 3.3E-12 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 Hamap MF_01895 Ribonuclease R [rnr]. 37 741 55.95 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 SMART SM00316 658 741 6.9E-11 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 SMART SM00316 79 140 0.051 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 SUPERFAMILY SSF50249 67 145 3.23E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 Pfam PF00575 S1 RNA binding domain 657 739 2.2E-10 T 22-04-2016 IPR003029 S1 domain GO:0003676 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 PANTHER PTHR23355:SF9 3 594 8.4E-262 T 22-04-2016 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 PANTHER PTHR23355:SF9 617 819 8.4E-262 T 22-04-2016 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 SMART SM00955 258 596 2.2E-180 T 22-04-2016 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 74 740 2.3E-234 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 R615_RS14750 bb55f9284bfa857b60d7a6534e3c81ed 847 Gene3D G3DSA:2.40.50.140 660 746 1.7E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SMART SM00052 1132 1379 8.4E-121 T 22-04-2016 IPR001633 EAL domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 560 692 1.0E-12 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 835 952 9.7E-16 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 695 830 4.2E-18 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 313 429 3.3E-11 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Gene3D G3DSA:3.30.450.20 434 549 7.4E-9 T 22-04-2016 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 954 1121 3.1E-44 T 22-04-2016 IPR000160 GGDEF domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Pfam PF13426 PAS domain 842 945 6.4E-10 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Pfam PF00989 PAS fold 312 419 1.4E-10 T 22-04-2016 IPR013767 PAS fold GO:0006355 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Pfam PF00989 PAS fold 699 820 4.0E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 PANTHER PTHR10799:SF774 659 836 1.3E-80 T 22-04-2016 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 PANTHER PTHR10799:SF774 990 1233 1.3E-80 T 22-04-2016 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Pfam PF08447 PAS fold 594 680 1.2E-9 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 PANTHER PTHR10799 659 836 1.3E-80 T 22-04-2016 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 PANTHER PTHR10799 990 1233 1.3E-80 T 22-04-2016 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SMART SM00267 946 1122 1.1E-63 T 22-04-2016 IPR000160 GGDEF domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Gene3D G3DSA:3.30.450.20 690 820 5.0E-19 T 22-04-2016 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SMART SM00086 513 555 23.0 T 22-04-2016 IPR001610 PAC motif R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SMART SM00086 381 422 78.0 T 22-04-2016 IPR001610 PAC motif R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SMART SM00086 904 946 0.015 T 22-04-2016 IPR001610 PAC motif R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SMART SM00086 781 823 0.012 T 22-04-2016 IPR001610 PAC motif R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SMART SM00086 643 686 3.9E-5 T 22-04-2016 IPR001610 PAC motif R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SUPERFAMILY SSF55785 419 543 5.14E-7 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Pfam PF00990 Diguanylate cyclase, GGDEF domain 957 1118 3.6E-48 T 22-04-2016 IPR000160 GGDEF domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Gene3D G3DSA:3.30.450.20 821 939 6.2E-20 T 22-04-2016 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Gene3D G3DSA:3.30.450.20 315 433 2.5E-13 T 22-04-2016 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SUPERFAMILY SSF141868 1137 1383 2.88E-92 T 22-04-2016 IPR001633 EAL domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SUPERFAMILY SSF55785 842 954 1.57E-18 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SUPERFAMILY SSF55073 962 1123 6.28E-49 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SUPERFAMILY SSF55785 549 684 5.41E-18 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Gene3D G3DSA:3.30.70.270 958 1130 7.2E-59 T 22-04-2016 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Pfam PF00563 EAL domain 1138 1374 3.4E-75 T 22-04-2016 IPR001633 EAL domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SMART SM00091 698 764 5.7E-6 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SMART SM00091 564 635 0.56 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SMART SM00091 309 376 1.0E-6 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SMART SM00091 831 898 1.0E-7 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Gene3D G3DSA:3.20.20.450 1135 1385 6.4E-100 T 22-04-2016 IPR001633 EAL domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SUPERFAMILY SSF55785 683 821 2.65E-17 T 22-04-2016 IPR000014 PAS domain R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 Gene3D G3DSA:3.30.450.20 550 684 3.9E-21 T 22-04-2016 R615_RS14445 f6744adaffc6f448bd7dadca5baca9c8 1393 SUPERFAMILY SSF55785 300 420 1.06E-13 T 22-04-2016 IPR000014 PAS domain R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 SUPERFAMILY SSF50447 262 399 1.1E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 Pfam PF03764 Elongation factor G, domain IV 476 594 2.1E-44 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 Pfam PF00679 Elongation factor G C-terminus 598 683 1.5E-27 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 Pfam PF03144 Elongation factor Tu domain 2 321 388 8.6E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 SUPERFAMILY SSF54980 401 478 2.88E-21 T 22-04-2016 IPR009022 Elongation factor G, III-V domain R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 SUPERFAMILY SSF52540 3 279 3.03E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 Gene3D G3DSA:2.40.30.10 304 402 6.7E-34 T 22-04-2016 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 PANTHER PTHR23115:SF154 301 688 0.0 T 22-04-2016 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 PANTHER PTHR23115:SF154 252 280 0.0 T 22-04-2016 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 PANTHER PTHR23115:SF154 3 174 0.0 T 22-04-2016 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 PANTHER PTHR23115 301 688 0.0 T 22-04-2016 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 PANTHER PTHR23115 252 280 0.0 T 22-04-2016 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 PANTHER PTHR23115 3 174 0.0 T 22-04-2016 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 SUPERFAMILY SSF54211 476 596 1.14E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 SUPERFAMILY SSF54980 600 692 1.25E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 PRINTS PR00315 GTP-binding elongation factor signature 75 85 4.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 PRINTS PR00315 GTP-binding elongation factor signature 127 136 4.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 689 2.3E-289 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 170 1.5E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 Gene3D G3DSA:3.30.70.240 596 682 3.3E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 SMART SM00889 477 595 4.3E-64 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 Gene3D G3DSA:3.40.50.300 2 284 4.8E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 Gene3D G3DSA:3.30.230.10 481 595 7.6E-46 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 SMART SM00838 597 684 5.3E-42 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 Gene3D G3DSA:3.30.70.870 403 477 2.0E-31 T 22-04-2016 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 Pfam PF14492 Elongation Factor G, domain II 401 475 2.9E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 Pfam PF00009 Elongation factor Tu GTP binding domain 6 279 1.1E-61 T 22-04-2016 R615_RS15955 5784286f9dd14c781e110e09bc57a1f4 696 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 100.059 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 R615_RS01710 d97f80130bf901d892f8907b7fec4937 379 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 19 350 1.5E-72 T 22-04-2016 IPR010732 Type VI secretion, TssG-like R615_RS01710 d97f80130bf901d892f8907b7fec4937 379 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 19 349 3.1E-83 T 22-04-2016 IPR010732 Type VI secretion, TssG-like R615_RS01710 d97f80130bf901d892f8907b7fec4937 379 PANTHER PTHR35564 2 373 4.1E-47 T 22-04-2016 R615_RS01710 d97f80130bf901d892f8907b7fec4937 379 PANTHER PTHR35564:SF2 2 373 4.1E-47 T 22-04-2016 R615_RS11865 3aa58236ab7910acd9359fed0ad13261 251 SUPERFAMILY SSF55729 18 224 3.87E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS11865 3aa58236ab7910acd9359fed0ad13261 251 PANTHER PTHR37323:SF1 17 249 4.6E-60 T 22-04-2016 R615_RS11865 3aa58236ab7910acd9359fed0ad13261 251 PANTHER PTHR37323 17 249 4.6E-60 T 22-04-2016 R615_RS11865 3aa58236ab7910acd9359fed0ad13261 251 Pfam PF13444 Acetyltransferase (GNAT) domain 34 135 2.1E-27 T 22-04-2016 R615_RS11865 3aa58236ab7910acd9359fed0ad13261 251 Gene3D G3DSA:3.40.630.30 22 173 1.2E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS02260 9625f09430c17a21ecd29251c17a015d 245 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 245 34.595 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 R615_RS02260 9625f09430c17a21ecd29251c17a015d 245 SUPERFAMILY SSF64167 1 242 6.41E-73 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 R615_RS02260 9625f09430c17a21ecd29251c17a015d 245 Pfam PF01975 Survival protein SurE 4 180 7.0E-49 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 R615_RS02260 9625f09430c17a21ecd29251c17a015d 245 Gene3D G3DSA:3.40.1210.10 1 242 2.1E-72 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 R615_RS02260 9625f09430c17a21ecd29251c17a015d 245 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 7.4E-57 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 R615_RS02260 9625f09430c17a21ecd29251c17a015d 245 PANTHER PTHR30457 1 238 3.3E-74 T 22-04-2016 R615_RS16975 ae24bb4894fc81c8cd87738eea6c1710 75 PANTHER PTHR10031 7 75 1.5E-17 T 22-04-2016 R615_RS16975 ae24bb4894fc81c8cd87738eea6c1710 75 Hamap MF_01396 ATP synthase subunit c [atpH]. 6 74 14.198 T 22-04-2016 R615_RS16975 ae24bb4894fc81c8cd87738eea6c1710 75 PRINTS PR00124 ATP synthase C subunit signature 30 45 2.9E-9 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 R615_RS16975 ae24bb4894fc81c8cd87738eea6c1710 75 PRINTS PR00124 ATP synthase C subunit signature 47 72 2.9E-9 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 R615_RS16975 ae24bb4894fc81c8cd87738eea6c1710 75 PRINTS PR00124 ATP synthase C subunit signature 9 28 2.9E-9 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 R615_RS16975 ae24bb4894fc81c8cd87738eea6c1710 75 SUPERFAMILY SSF81333 3 74 1.7E-17 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 R615_RS16975 ae24bb4894fc81c8cd87738eea6c1710 75 Gene3D G3DSA:1.20.20.10 3 74 1.7E-28 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 R615_RS16975 ae24bb4894fc81c8cd87738eea6c1710 75 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 18 74 4.9E-27 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 R615_RS16975 ae24bb4894fc81c8cd87738eea6c1710 75 Pfam PF00137 ATP synthase subunit C 8 70 4.1E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 R615_RS16975 ae24bb4894fc81c8cd87738eea6c1710 75 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site R615_RS11100 405cd2b8943e7fc39264df7e76532f19 84 SUPERFAMILY SSF143120 1 81 1.7E-24 T 22-04-2016 R615_RS11100 405cd2b8943e7fc39264df7e76532f19 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 1.9E-22 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM R615_RS11100 405cd2b8943e7fc39264df7e76532f19 84 Gene3D G3DSA:3.40.1620.10 1 50 6.0E-9 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM R615_RS11100 405cd2b8943e7fc39264df7e76532f19 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 55 2.8E-8 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM R615_RS11100 405cd2b8943e7fc39264df7e76532f19 84 PANTHER PTHR33713 1 83 4.5E-22 T 22-04-2016 R615_RS11100 405cd2b8943e7fc39264df7e76532f19 84 PANTHER PTHR33713:SF6 1 83 4.5E-22 T 22-04-2016 R615_RS04485 58c7f753630e0d77d4b20b73599ca5e8 838 Pfam PF09317 Domain of unknown function (DUF1974) 515 804 9.6E-96 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 R615_RS04485 58c7f753630e0d77d4b20b73599ca5e8 838 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 6.5E-16 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS04485 58c7f753630e0d77d4b20b73599ca5e8 838 Gene3D G3DSA:1.20.140.10 348 508 8.2E-28 T 22-04-2016 R615_RS04485 58c7f753630e0d77d4b20b73599ca5e8 838 PANTHER PTHR10909 52 534 1.4E-205 T 22-04-2016 R615_RS04485 58c7f753630e0d77d4b20b73599ca5e8 838 PANTHER PTHR10909:SF283 52 534 1.4E-205 T 22-04-2016 R615_RS04485 58c7f753630e0d77d4b20b73599ca5e8 838 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 129 233 1.8E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS04485 58c7f753630e0d77d4b20b73599ca5e8 838 Gene3D G3DSA:2.40.110.10 238 347 7.7E-14 T 22-04-2016 R615_RS04485 58c7f753630e0d77d4b20b73599ca5e8 838 SUPERFAMILY SSF56645 126 356 3.14E-39 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 R615_RS04485 58c7f753630e0d77d4b20b73599ca5e8 838 SUPERFAMILY SSF47203 361 508 1.55E-26 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS04485 58c7f753630e0d77d4b20b73599ca5e8 838 Gene3D G3DSA:1.10.540.10 98 235 8.0E-26 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS09750 c99d01cbc0b8bdb89c5440674ae97c1f 295 Gene3D G3DSA:1.20.1510.10 16 209 1.1E-52 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain R615_RS09750 c99d01cbc0b8bdb89c5440674ae97c1f 295 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 289 2.1E-73 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS09750 c99d01cbc0b8bdb89c5440674ae97c1f 295 SUPERFAMILY SSF160240 214 286 8.11E-7 T 22-04-2016 R615_RS09750 c99d01cbc0b8bdb89c5440674ae97c1f 295 PANTHER PTHR11562:SF17 2 295 1.0E-85 T 22-04-2016 R615_RS09750 c99d01cbc0b8bdb89c5440674ae97c1f 295 SUPERFAMILY SSF161111 14 210 2.62E-52 T 22-04-2016 R615_RS09750 c99d01cbc0b8bdb89c5440674ae97c1f 295 PANTHER PTHR11562 2 295 1.0E-85 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS09750 c99d01cbc0b8bdb89c5440674ae97c1f 295 Pfam PF01545 Cation efflux family 21 209 5.5E-42 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS14635 616b1f7c3a05b0270722f50fde995acc 319 SUPERFAMILY SSF46785 11 90 4.08E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS14635 616b1f7c3a05b0270722f50fde995acc 319 PANTHER PTHR30126 11 317 4.0E-96 T 22-04-2016 R615_RS14635 616b1f7c3a05b0270722f50fde995acc 319 Gene3D G3DSA:1.10.10.10 12 98 1.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS14635 616b1f7c3a05b0270722f50fde995acc 319 Pfam PF03466 LysR substrate binding domain 99 302 1.8E-48 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS14635 616b1f7c3a05b0270722f50fde995acc 319 Gene3D G3DSA:3.40.190.10 185 267 7.4E-20 T 22-04-2016 R615_RS14635 616b1f7c3a05b0270722f50fde995acc 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 7.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS14635 616b1f7c3a05b0270722f50fde995acc 319 Gene3D G3DSA:3.40.190.10 101 184 1.0E-13 T 22-04-2016 R615_RS14635 616b1f7c3a05b0270722f50fde995acc 319 SUPERFAMILY SSF53850 100 306 1.09E-44 T 22-04-2016 R615_RS14635 616b1f7c3a05b0270722f50fde995acc 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 9.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS14635 616b1f7c3a05b0270722f50fde995acc 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 9.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS14635 616b1f7c3a05b0270722f50fde995acc 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 9.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS14635 616b1f7c3a05b0270722f50fde995acc 319 PANTHER PTHR30126:SF5 11 317 4.0E-96 T 22-04-2016 R615_RS12785 8d83511e4895f592c5a2c701bbc6dcca 1090 SUPERFAMILY SSF50965 155 422 1.03E-20 T 22-04-2016 IPR011043 Galactose oxidase/kelch, beta-propeller R615_RS12785 8d83511e4895f592c5a2c701bbc6dcca 1090 SUPERFAMILY SSF117281 354 564 9.94E-21 T 22-04-2016 R615_RS12785 8d83511e4895f592c5a2c701bbc6dcca 1090 Gene3D G3DSA:2.120.10.80 149 329 1.1E-19 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 R615_RS12785 8d83511e4895f592c5a2c701bbc6dcca 1090 Gene3D G3DSA:2.120.10.80 351 468 9.4E-10 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 R615_RS12785 8d83511e4895f592c5a2c701bbc6dcca 1090 Gene3D G3DSA:2.120.10.80 484 655 2.4E-11 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 R615_RS12785 8d83511e4895f592c5a2c701bbc6dcca 1090 SUPERFAMILY SSF50965 548 654 1.83E-7 T 22-04-2016 IPR011043 Galactose oxidase/kelch, beta-propeller R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 Gene3D G3DSA:3.40.309.10 833 1022 1.8E-44 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 529 1039 4.0E-192 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 SUPERFAMILY SSF53720 583 1046 2.62E-114 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 75 192 1.2E-36 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 Gene3D G3DSA:3.40.605.10 583 832 3.7E-60 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 845 856 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 PANTHER PTHR11699 546 1073 1.2E-147 T 22-04-2016 R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 Gene3D G3DSA:3.20.20.220 195 536 8.5E-96 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 Pfam PF01619 Proline dehydrogenase 206 494 5.2E-89 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 Gene3D G3DSA:1.10.2060.10 70 193 8.4E-38 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 PANTHER PTHR11699:SF18 546 1073 1.2E-147 T 22-04-2016 R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 SUPERFAMILY SSF51730 195 537 2.04E-102 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 PIRSF PIRSF000197 7 1070 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 SUPERFAMILY SSF81935 21 194 1.44E-44 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 R615_RS07325 05bffc29ce3427b6c2efe2f6f8304133 1073 Pfam PF00171 Aldehyde dehydrogenase family 583 1039 3.9E-102 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 R615_RS03905 4ea06eda0751938c22e8b1b3c5f62087 640 Pfam PF06480 FtsH Extracellular 6 91 6.8E-14 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 R615_RS03905 4ea06eda0751938c22e8b1b3c5f62087 640 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 596 7.5E-232 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 R615_RS03905 4ea06eda0751938c22e8b1b3c5f62087 640 SUPERFAMILY SSF140990 404 606 1.7E-72 T 22-04-2016 R615_RS03905 4ea06eda0751938c22e8b1b3c5f62087 640 SUPERFAMILY SSF52540 145 393 1.07E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03905 4ea06eda0751938c22e8b1b3c5f62087 640 SMART SM00382 186 325 3.8E-24 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS03905 4ea06eda0751938c22e8b1b3c5f62087 640 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 605 36.898 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 R615_RS03905 4ea06eda0751938c22e8b1b3c5f62087 640 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 R615_RS03905 4ea06eda0751938c22e8b1b3c5f62087 640 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 3.9E-45 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS03905 4ea06eda0751938c22e8b1b3c5f62087 640 Gene3D G3DSA:1.10.8.60 334 407 3.3E-28 T 22-04-2016 R615_RS03905 4ea06eda0751938c22e8b1b3c5f62087 640 Gene3D G3DSA:3.40.50.300 149 333 1.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03905 4ea06eda0751938c22e8b1b3c5f62087 640 Pfam PF01434 Peptidase family M41 384 595 1.1E-77 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 R615_RS03905 4ea06eda0751938c22e8b1b3c5f62087 640 PANTHER PTHR23076 1 614 0.0 T 22-04-2016 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 PANTHER PTHR10174:SF116 204 372 2.7E-144 T 22-04-2016 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 PANTHER PTHR10174:SF116 106 182 2.7E-144 T 22-04-2016 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 SUPERFAMILY SSF55347 137 358 2.65E-77 T 22-04-2016 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 147 357 5.4E-56 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 PANTHER PTHR10174 204 372 2.7E-144 T 22-04-2016 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 PANTHER PTHR10174 106 182 2.7E-144 T 22-04-2016 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 SMART SM00859 5 125 7.6E-26 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 PIRSF PIRSF000148 4 374 5.3E-68 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 Gene3D G3DSA:3.30.360.10 146 354 3.2E-75 T 22-04-2016 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 SUPERFAMILY SSF51735 5 150 8.16E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 Gene3D G3DSA:3.40.50.720 5 145 3.2E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 265 279 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 123 4.0E-25 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 5 371 3.5E-193 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 R615_RS09660 ee056aacd061a31176bddbd8c455d7eb 374 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 371 34.205 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 SUPERFAMILY SSF46548 9 160 1.05E-37 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 PANTHER PTHR11938 23 472 3.0E-272 T 22-04-2016 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 PANTHER PTHR11938:SF93 23 472 3.0E-272 T 22-04-2016 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 Gene3D G3DSA:3.40.50.720 401 470 1.2E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 Gene3D G3DSA:3.40.50.720 151 239 1.2E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 28 137 8.9E-38 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 9 472 2.5E-236 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 PRINTS PR00419 Adrenodoxin reductase family signature 216 226 6.3E-35 T 22-04-2016 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 PRINTS PR00419 Adrenodoxin reductase family signature 174 187 6.3E-35 T 22-04-2016 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 6.3E-35 T 22-04-2016 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 PRINTS PR00419 Adrenodoxin reductase family signature 326 339 6.3E-35 T 22-04-2016 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 PRINTS PR00419 Adrenodoxin reductase family signature 151 173 6.3E-35 T 22-04-2016 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 Gene3D G3DSA:1.10.1060.10 10 150 2.1E-45 T 22-04-2016 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 Gene3D G3DSA:3.50.50.60 240 400 1.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 459 2.9E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14915 0817dca09a654b81e0dafeaadeb6f9ec 472 SUPERFAMILY SSF51971 148 401 1.71E-70 T 22-04-2016 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 345 1.1E-68 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 7.7E-20 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 7.7E-20 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 PRINTS PR01005 Flagellar hook-associated protein signature 421 438 7.7E-20 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 7.7E-20 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 7.7E-20 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 7.7E-20 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 PANTHER PTHR30033 861 993 5.7E-83 T 22-04-2016 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 PANTHER PTHR30033 1 425 5.7E-83 T 22-04-2016 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 PANTHER PTHR30033 447 520 5.7E-83 T 22-04-2016 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 SUPERFAMILY SSF64518 587 722 1.7E-17 T 22-04-2016 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 SUPERFAMILY SSF64518 855 993 1.7E-17 T 22-04-2016 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 PANTHER PTHR30033:SF1 861 993 5.7E-83 T 22-04-2016 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 PANTHER PTHR30033:SF1 1 425 5.7E-83 T 22-04-2016 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 PANTHER PTHR30033:SF1 447 520 5.7E-83 T 22-04-2016 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 Pfam PF00460 Flagella basal body rod protein 5 34 1.6E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 SUPERFAMILY SSF64518 125 449 5.62E-21 T 22-04-2016 R615_RS04670 83a3c1bf0f2c6823fd2e93ad736d044a 993 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 947 990 7.9E-7 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain R615_RS01160 fb056c41e3e5c7ac0b82756c007ca9d9 235 Gene3D G3DSA:3.40.50.1000 1 225 1.4E-38 T 22-04-2016 IPR023214 HAD-like domain R615_RS01160 fb056c41e3e5c7ac0b82756c007ca9d9 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 3.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS01160 fb056c41e3e5c7ac0b82756c007ca9d9 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 190 203 3.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS01160 fb056c41e3e5c7ac0b82756c007ca9d9 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS01160 fb056c41e3e5c7ac0b82756c007ca9d9 235 PANTHER PTHR12725 1 232 1.1E-40 T 22-04-2016 R615_RS01160 fb056c41e3e5c7ac0b82756c007ca9d9 235 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 195 1.1E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS01160 fb056c41e3e5c7ac0b82756c007ca9d9 235 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 201 3.0E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS01160 fb056c41e3e5c7ac0b82756c007ca9d9 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 201 2.1E-20 T 22-04-2016 IPR023214 HAD-like domain R615_RS01160 fb056c41e3e5c7ac0b82756c007ca9d9 235 SUPERFAMILY SSF56784 3 227 2.57E-41 T 22-04-2016 IPR023214 HAD-like domain R615_RS01160 fb056c41e3e5c7ac0b82756c007ca9d9 235 PANTHER PTHR12725:SF65 1 232 1.1E-40 T 22-04-2016 R615_RS09440 13b5dbaf2cf8b2daa3ac04400090e58a 295 Gene3D G3DSA:3.40.50.1820 22 287 1.9E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS09440 13b5dbaf2cf8b2daa3ac04400090e58a 295 Pfam PF12697 Alpha/beta hydrolase family 35 283 2.1E-18 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS09440 13b5dbaf2cf8b2daa3ac04400090e58a 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 6.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS09440 13b5dbaf2cf8b2daa3ac04400090e58a 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 6.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS09440 13b5dbaf2cf8b2daa3ac04400090e58a 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 6.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS09440 13b5dbaf2cf8b2daa3ac04400090e58a 295 PANTHER PTHR10992:SF107 232 291 2.0E-21 T 22-04-2016 R615_RS09440 13b5dbaf2cf8b2daa3ac04400090e58a 295 PANTHER PTHR10992:SF107 35 192 2.0E-21 T 22-04-2016 R615_RS09440 13b5dbaf2cf8b2daa3ac04400090e58a 295 PANTHER PTHR10992 232 291 2.0E-21 T 22-04-2016 R615_RS09440 13b5dbaf2cf8b2daa3ac04400090e58a 295 PANTHER PTHR10992 35 192 2.0E-21 T 22-04-2016 R615_RS09440 13b5dbaf2cf8b2daa3ac04400090e58a 295 SUPERFAMILY SSF53474 22 287 4.36E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS00600 901f02af82041c0450f92cd2027bd973 316 SUPERFAMILY SSF50486 206 306 8.48E-32 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 R615_RS00600 901f02af82041c0450f92cd2027bd973 316 Gene3D G3DSA:3.10.25.10 208 303 1.7E-32 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS00600 901f02af82041c0450f92cd2027bd973 316 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 3 305 36.782 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS00600 901f02af82041c0450f92cd2027bd973 316 SUPERFAMILY SSF53328 3 208 1.09E-65 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS00600 901f02af82041c0450f92cd2027bd973 316 PANTHER PTHR11138 2 301 2.5E-119 T 22-04-2016 R615_RS00600 901f02af82041c0450f92cd2027bd973 316 Gene3D G3DSA:3.40.50.170 2 206 5.1E-73 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS00600 901f02af82041c0450f92cd2027bd973 316 Pfam PF02911 Formyl transferase, C-terminal domain 205 302 2.2E-29 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS00600 901f02af82041c0450f92cd2027bd973 316 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS00600 901f02af82041c0450f92cd2027bd973 316 Pfam PF00551 Formyl transferase 4 181 3.6E-47 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS00600 901f02af82041c0450f92cd2027bd973 316 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 306 4.1E-99 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS12995 1a4a4c220711a640c9466b8c8a976006 195 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.076 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 R615_RS12995 1a4a4c220711a640c9466b8c8a976006 195 SUPERFAMILY SSF53178 5 193 4.19E-70 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 R615_RS12995 1a4a4c220711a640c9466b8c8a976006 195 Gene3D G3DSA:3.40.50.1470 3 193 8.3E-72 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 R615_RS12995 1a4a4c220711a640c9466b8c8a976006 195 PANTHER PTHR17224:SF1 7 194 8.3E-81 T 22-04-2016 R615_RS12995 1a4a4c220711a640c9466b8c8a976006 195 Pfam PF01195 Peptidyl-tRNA hydrolase 7 189 2.1E-54 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 R615_RS12995 1a4a4c220711a640c9466b8c8a976006 195 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 6 192 5.7E-66 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 R615_RS12995 1a4a4c220711a640c9466b8c8a976006 195 PANTHER PTHR17224 7 194 8.3E-81 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 R615_RS12995 1a4a4c220711a640c9466b8c8a976006 195 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 R615_RS17010 d6da76f5c6f8c683190fc48aa129ed28 388 SUPERFAMILY SSF103473 6 384 8.76E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS17010 d6da76f5c6f8c683190fc48aa129ed28 388 Gene3D G3DSA:1.20.1250.20 14 159 1.8E-10 T 22-04-2016 R615_RS17010 d6da76f5c6f8c683190fc48aa129ed28 388 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 R615_RS17010 d6da76f5c6f8c683190fc48aa129ed28 388 Gene3D G3DSA:1.20.1250.20 212 385 3.5E-8 T 22-04-2016 R615_RS17010 d6da76f5c6f8c683190fc48aa129ed28 388 PANTHER PTHR23537:SF1 3 388 1.9E-31 T 22-04-2016 R615_RS17010 d6da76f5c6f8c683190fc48aa129ed28 388 PANTHER PTHR23537 3 388 1.9E-31 T 22-04-2016 R615_RS17010 d6da76f5c6f8c683190fc48aa129ed28 388 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 23 378 1.6E-59 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB R615_RS07340 742d9080a2dfdf64684aab42de29f0c4 453 Pfam PF00270 DEAD/DEAH box helicase 26 199 5.2E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS07340 742d9080a2dfdf64684aab42de29f0c4 453 SUPERFAMILY SSF52540 25 104 6.55E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07340 742d9080a2dfdf64684aab42de29f0c4 453 SMART SM00487 21 226 1.2E-52 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS07340 742d9080a2dfdf64684aab42de29f0c4 453 Pfam PF00271 Helicase conserved C-terminal domain 237 343 3.0E-26 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS07340 742d9080a2dfdf64684aab42de29f0c4 453 PANTHER PTHR24031:SF0 1 439 1.9E-149 T 22-04-2016 R615_RS07340 742d9080a2dfdf64684aab42de29f0c4 453 PANTHER PTHR24031 1 439 1.9E-149 T 22-04-2016 R615_RS07340 742d9080a2dfdf64684aab42de29f0c4 453 SMART SM00490 262 343 2.2E-30 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS07340 742d9080a2dfdf64684aab42de29f0c4 453 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site R615_RS07340 742d9080a2dfdf64684aab42de29f0c4 453 Gene3D G3DSA:3.40.50.300 2 223 4.8E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07340 742d9080a2dfdf64684aab42de29f0c4 453 Gene3D G3DSA:3.40.50.300 224 376 2.7E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07340 742d9080a2dfdf64684aab42de29f0c4 453 SUPERFAMILY SSF52540 79 364 2.24E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 PANTHER PTHR30115 1 112 2.2E-76 T 22-04-2016 R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 SUPERFAMILY SSF54913 1 112 1.02E-45 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 PIRSF PIRSF039144 1 112 1.5E-54 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.9E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 Gene3D G3DSA:3.30.70.120 1 112 2.7E-50 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 PANTHER PTHR30115:SF12 1 112 2.2E-76 T 22-04-2016 R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 PRINTS PR00340 P-II protein signature 83 103 1.1E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 PRINTS PR00340 P-II protein signature 52 75 1.1E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 PRINTS PR00340 P-II protein signature 23 41 1.1E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 PRINTS PR00340 P-II protein signature 2 17 1.1E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS16385 b2bb80172fd821d1e54b4395bbb3aae0 112 SMART SM00938 4 105 4.5E-67 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS14620 1dd724c7fa7ca832aaf39779081e0195 222 PANTHER PTHR11002 1 213 4.7E-73 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 R615_RS14620 1dd724c7fa7ca832aaf39779081e0195 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 R615_RS14620 1dd724c7fa7ca832aaf39779081e0195 222 Gene3D G3DSA:3.40.1050.10 2 211 9.4E-68 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 R615_RS14620 1dd724c7fa7ca832aaf39779081e0195 222 Pfam PF00484 Carbonic anhydrase 34 194 4.9E-51 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 R615_RS14620 1dd724c7fa7ca832aaf39779081e0195 222 SUPERFAMILY SSF53056 2 216 5.76E-66 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 R615_RS14620 1dd724c7fa7ca832aaf39779081e0195 222 PANTHER PTHR11002:SF13 1 213 4.7E-73 T 22-04-2016 R615_RS14620 1dd724c7fa7ca832aaf39779081e0195 222 SMART SM00947 27 198 2.9E-64 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 R615_RS14620 1dd724c7fa7ca832aaf39779081e0195 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 R615_RS03440 df5713f2c61951afe64ac5f229558292 106 Gene3D G3DSA:3.40.30.10 7 101 3.1E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS03440 df5713f2c61951afe64ac5f229558292 106 SUPERFAMILY SSF52833 1 102 5.36E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS03440 df5713f2c61951afe64ac5f229558292 106 PIRSF PIRSF005894 1 106 3.2E-48 T 22-04-2016 IPR014434 Monothiol glutaredoxin R615_RS03440 df5713f2c61951afe64ac5f229558292 106 Pfam PF00462 Glutaredoxin 16 80 3.1E-16 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 R615_RS03440 df5713f2c61951afe64ac5f229558292 106 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.5E-44 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related R615_RS03440 df5713f2c61951afe64ac5f229558292 106 PANTHER PTHR10293 1 103 6.6E-54 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related R615_RS03635 abb48d65ef1a48222c4fb5f11d8bec15 543 Pfam PF13817 IS66 C-terminal element 498 535 1.3E-16 T 22-04-2016 R615_RS03635 abb48d65ef1a48222c4fb5f11d8bec15 543 Pfam PF13007 Transposase C of IS166 homeodomain 58 138 6.7E-14 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain R615_RS03635 abb48d65ef1a48222c4fb5f11d8bec15 543 Pfam PF03050 Transposase IS66 family 204 492 1.6E-100 T 22-04-2016 IPR004291 Transposase, IS66 R615_RS03635 abb48d65ef1a48222c4fb5f11d8bec15 543 PANTHER PTHR33678:SF1 86 535 1.7E-92 T 22-04-2016 R615_RS03635 abb48d65ef1a48222c4fb5f11d8bec15 543 PANTHER PTHR33678 86 535 1.7E-92 T 22-04-2016 R615_RS03635 abb48d65ef1a48222c4fb5f11d8bec15 543 Pfam PF13005 zinc-finger binding domain of transposase IS66 147 189 3.5E-11 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 R615_RS02250 d17007c68d92722871f0f50df5d76245 160 PANTHER PTHR32125 1 155 5.2E-52 T 22-04-2016 R615_RS02250 d17007c68d92722871f0f50df5d76245 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 4.8E-69 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS02250 d17007c68d92722871f0f50df5d76245 160 SUPERFAMILY SSF69765 1 156 1.15E-64 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS02250 d17007c68d92722871f0f50df5d76245 160 Gene3D G3DSA:3.30.1330.50 1 155 7.5E-71 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS02250 d17007c68d92722871f0f50df5d76245 160 Pfam PF02542 YgbB family 1 154 5.0E-67 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS02250 d17007c68d92722871f0f50df5d76245 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 35.657 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS02250 d17007c68d92722871f0f50df5d76245 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS07245 58dd7103265775a308615bdb8cb8e4cc 135 Pfam PF04965 Gene 25-like lysozyme 29 118 2.9E-20 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD R615_RS07245 58dd7103265775a308615bdb8cb8e4cc 135 Gene3D G3DSA:3.10.450.40 4 132 3.3E-38 T 22-04-2016 R615_RS07245 58dd7103265775a308615bdb8cb8e4cc 135 PANTHER PTHR35862 4 131 2.7E-25 T 22-04-2016 R615_RS07245 58dd7103265775a308615bdb8cb8e4cc 135 PANTHER PTHR35862:SF2 4 131 2.7E-25 T 22-04-2016 R615_RS07245 58dd7103265775a308615bdb8cb8e4cc 135 SUPERFAMILY SSF160719 25 132 1.96E-27 T 22-04-2016 R615_RS03385 7e12621cfd9798187f4ed4feaf5b5038 660 SMART SM00267 226 395 3.6E-16 T 22-04-2016 IPR000160 GGDEF domain R615_RS03385 7e12621cfd9798187f4ed4feaf5b5038 660 PANTHER PTHR33121 356 656 7.2E-27 T 22-04-2016 R615_RS03385 7e12621cfd9798187f4ed4feaf5b5038 660 SMART SM00052 406 650 1.2E-27 T 22-04-2016 IPR001633 EAL domain R615_RS03385 7e12621cfd9798187f4ed4feaf5b5038 660 SUPERFAMILY SSF141868 412 647 2.88E-48 T 22-04-2016 IPR001633 EAL domain R615_RS03385 7e12621cfd9798187f4ed4feaf5b5038 660 Pfam PF16448 LapD/MoxY periplasmic domain 24 146 4.1E-32 T 22-04-2016 IPR032244 LapD/MoxY, periplasmic domain R615_RS03385 7e12621cfd9798187f4ed4feaf5b5038 660 PANTHER PTHR33121:SF10 356 656 7.2E-27 T 22-04-2016 R615_RS03385 7e12621cfd9798187f4ed4feaf5b5038 660 Pfam PF00563 EAL domain 414 645 2.8E-44 T 22-04-2016 IPR001633 EAL domain R615_RS03385 7e12621cfd9798187f4ed4feaf5b5038 660 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 235 394 8.5E-12 T 22-04-2016 IPR000160 GGDEF domain R615_RS03385 7e12621cfd9798187f4ed4feaf5b5038 660 SUPERFAMILY SSF55073 243 397 4.24E-20 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS03385 7e12621cfd9798187f4ed4feaf5b5038 660 Gene3D G3DSA:3.20.20.450 409 648 3.2E-47 T 22-04-2016 IPR001633 EAL domain R615_RS03385 7e12621cfd9798187f4ed4feaf5b5038 660 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 389 2.8E-21 T 22-04-2016 IPR000160 GGDEF domain R615_RS03385 7e12621cfd9798187f4ed4feaf5b5038 660 Gene3D G3DSA:3.30.70.270 239 400 6.2E-23 T 22-04-2016 R615_RS05635 3e100612899a8d53eb513b698dfe0807 335 SMART SM01321 12 186 2.7E-5 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS05635 3e100612899a8d53eb513b698dfe0807 335 SUPERFAMILY SSF143422 16 80 1.18E-20 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS05635 3e100612899a8d53eb513b698dfe0807 335 SUPERFAMILY SSF143422 133 191 1.18E-20 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS05635 3e100612899a8d53eb513b698dfe0807 335 Gene3D G3DSA:3.30.70.1290 134 189 2.5E-9 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS05635 3e100612899a8d53eb513b698dfe0807 335 Gene3D G3DSA:3.30.70.1290 45 81 2.5E-9 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS05635 3e100612899a8d53eb513b698dfe0807 335 PANTHER PTHR34322:SF2 2 333 2.2E-135 T 22-04-2016 R615_RS05635 3e100612899a8d53eb513b698dfe0807 335 PANTHER PTHR34322 2 333 2.2E-135 T 22-04-2016 R615_RS14435 be3338ee44fe23f42922f4c9c3fc6c7d 119 Gene3D G3DSA:2.40.10.220 2 116 2.3E-27 T 22-04-2016 R615_RS14435 be3338ee44fe23f42922f4c9c3fc6c7d 119 Pfam PF07238 PilZ domain 2 98 2.5E-12 T 22-04-2016 IPR009875 PilZ domain GO:0035438 R615_RS14435 be3338ee44fe23f42922f4c9c3fc6c7d 119 SUPERFAMILY SSF141371 1 116 2.71E-22 T 22-04-2016 R615_RS14435 be3338ee44fe23f42922f4c9c3fc6c7d 119 PIRSF PIRSF028141 1 118 4.0E-29 T 22-04-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type R615_RS15240 1c2cd7a6f6c1cfbf945cd92bb1ae0935 319 PIRSF PIRSF013171 1 317 4.9E-91 T 22-04-2016 IPR009486 Purine nucleoside permease GO:0055085 R615_RS15240 1c2cd7a6f6c1cfbf945cd92bb1ae0935 319 Pfam PF06516 Purine nucleoside permease (NUP) 1 313 6.6E-113 T 22-04-2016 IPR009486 Purine nucleoside permease GO:0055085 R615_RS15240 1c2cd7a6f6c1cfbf945cd92bb1ae0935 319 PANTHER PTHR38643 48 308 1.1E-48 T 22-04-2016 R615_RS00790 474b5ebca2ff3fe9446b2fdcd44f5e6a 311 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 21 304 28.387 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 R615_RS00790 474b5ebca2ff3fe9446b2fdcd44f5e6a 311 PANTHER PTHR11048 11 297 2.6E-81 T 22-04-2016 R615_RS00790 474b5ebca2ff3fe9446b2fdcd44f5e6a 311 PANTHER PTHR11048:SF7 11 297 2.6E-81 T 22-04-2016 R615_RS00790 474b5ebca2ff3fe9446b2fdcd44f5e6a 311 Pfam PF01040 UbiA prenyltransferase family 44 287 1.6E-62 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 R615_RS00790 474b5ebca2ff3fe9446b2fdcd44f5e6a 311 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 26 303 1.3E-96 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SMART SM00091 433 498 0.094 T 22-04-2016 IPR000014 PAS domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SMART SM00091 22 89 5.0E-4 T 22-04-2016 IPR000014 PAS domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SMART SM00091 306 374 11.0 T 22-04-2016 IPR000014 PAS domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SUPERFAMILY SSF55785 314 424 2.62E-13 T 22-04-2016 IPR000014 PAS domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SUPERFAMILY SSF47226 1062 1075 9.03E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SUPERFAMILY SSF47226 1113 1210 9.03E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 679 791 2.3E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SMART SM00387 678 794 3.8E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SMART SM00388 566 631 8.2E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Pfam PF13426 PAS domain 36 135 1.6E-14 T 22-04-2016 IPR000014 PAS domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Pfam PF13426 PAS domain 443 545 0.087 T 22-04-2016 IPR000014 PAS domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Gene3D G3DSA:1.10.287.130 571 627 1.5E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SUPERFAMILY SSF55785 33 133 6.11E-27 T 22-04-2016 IPR000014 PAS domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Gene3D G3DSA:3.30.450.20 34 135 1.2E-24 T 22-04-2016 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Pfam PF13492 GAF domain 160 289 1.6E-6 T 22-04-2016 IPR003018 GAF domain GO:0005515 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SMART SM00086 380 421 7.1 T 22-04-2016 IPR001610 PAC motif R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SMART SM00086 94 136 1.2E-9 T 22-04-2016 IPR001610 PAC motif R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Gene3D G3DSA:1.20.120.160 1125 1210 6.4E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SUPERFAMILY SSF55785 418 544 4.01E-9 T 22-04-2016 IPR000014 PAS domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Gene3D G3DSA:3.40.50.2300 958 1084 1.5E-42 T 22-04-2016 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SUPERFAMILY SSF55781 160 303 4.32E-12 T 22-04-2016 IPR029016 GAF domain-like R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SUPERFAMILY SSF52172 957 1083 6.55E-38 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Pfam PF01627 Hpt domain 1134 1206 2.3E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Gene3D G3DSA:3.30.565.10 632 795 2.4E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Gene3D G3DSA:3.30.450.40 137 303 1.0E-7 T 22-04-2016 IPR029016 GAF domain-like R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 PANTHER PTHR24423:SF382 959 1123 2.7E-178 T 22-04-2016 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 PANTHER PTHR24423:SF382 431 819 2.7E-178 T 22-04-2016 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 PANTHER PTHR24423:SF382 34 151 2.7E-178 T 22-04-2016 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Gene3D G3DSA:3.40.50.2300 807 932 7.8E-23 T 22-04-2016 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SUPERFAMILY SSF47384 552 632 2.55E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Gene3D G3DSA:3.30.450.20 435 570 5.8E-12 T 22-04-2016 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Gene3D G3DSA:3.30.450.20 304 419 1.0E-15 T 22-04-2016 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SUPERFAMILY SSF52172 809 933 2.56E-21 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Pfam PF00072 Response regulator receiver domain 962 1079 7.2E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Pfam PF00072 Response regulator receiver domain 812 927 5.4E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 33 141 3.2E-17 T 22-04-2016 IPR000014 PAS domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 430 553 2.3E-7 T 22-04-2016 IPR000014 PAS domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SUPERFAMILY SSF55874 620 791 7.6E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Pfam PF08447 PAS fold 329 413 2.4E-7 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SMART SM00073 1124 1218 4.8E-5 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SMART SM00065 156 302 0.0098 T 22-04-2016 IPR003018 GAF domain GO:0005515 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 PANTHER PTHR24423 959 1123 2.7E-178 T 22-04-2016 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 PANTHER PTHR24423 431 819 2.7E-178 T 22-04-2016 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 PANTHER PTHR24423 34 151 2.7E-178 T 22-04-2016 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 Pfam PF00512 His Kinase A (phospho-acceptor) domain 566 630 5.5E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SMART SM00448 960 1079 3.0E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 SMART SM00448 810 929 1.3E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 PRINTS PR00344 Bacterial sensor protein C-terminal signature 754 772 5.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 733 5.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 PRINTS PR00344 Bacterial sensor protein C-terminal signature 778 791 5.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17405 e9e7732a92816d8b1ee17feff6d58314 1312 PRINTS PR00344 Bacterial sensor protein C-terminal signature 737 747 5.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS03515 c8f4359a47fba0afd6a08d67d681ed37 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 8.7E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS03515 c8f4359a47fba0afd6a08d67d681ed37 322 Pfam PF03466 LysR substrate binding domain 96 297 2.0E-47 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS03515 c8f4359a47fba0afd6a08d67d681ed37 322 PANTHER PTHR30537:SF5 3 314 5.5E-125 T 22-04-2016 R615_RS03515 c8f4359a47fba0afd6a08d67d681ed37 322 SUPERFAMILY SSF46785 5 119 6.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS03515 c8f4359a47fba0afd6a08d67d681ed37 322 Gene3D G3DSA:3.40.190.10 185 263 8.0E-7 T 22-04-2016 R615_RS03515 c8f4359a47fba0afd6a08d67d681ed37 322 Gene3D G3DSA:3.40.190.10 99 184 4.4E-24 T 22-04-2016 R615_RS03515 c8f4359a47fba0afd6a08d67d681ed37 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS03515 c8f4359a47fba0afd6a08d67d681ed37 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS03515 c8f4359a47fba0afd6a08d67d681ed37 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS03515 c8f4359a47fba0afd6a08d67d681ed37 322 SUPERFAMILY SSF53850 97 300 1.81E-49 T 22-04-2016 R615_RS03515 c8f4359a47fba0afd6a08d67d681ed37 322 PANTHER PTHR30537 3 314 5.5E-125 T 22-04-2016 R615_RS03515 c8f4359a47fba0afd6a08d67d681ed37 322 Gene3D G3DSA:1.10.10.10 9 94 2.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS13585 9e16b3da12d65895984d3307021cf804 894 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 107 300 2.0E-8 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 R615_RS13585 9e16b3da12d65895984d3307021cf804 894 PIRSF PIRSF000156 1 894 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 R615_RS13585 9e16b3da12d65895984d3307021cf804 894 SUPERFAMILY SSF52518 478 705 1.53E-97 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS13585 9e16b3da12d65895984d3307021cf804 894 Gene3D G3DSA:3.40.50.970 478 709 8.0E-119 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS13585 9e16b3da12d65895984d3307021cf804 894 Gene3D G3DSA:3.40.50.920 711 893 2.1E-57 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 R615_RS13585 9e16b3da12d65895984d3307021cf804 894 SUPERFAMILY SSF52518 58 474 1.16E-132 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS13585 9e16b3da12d65895984d3307021cf804 894 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 7 893 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 R615_RS13585 9e16b3da12d65895984d3307021cf804 894 PANTHER PTHR11624:SF67 558 772 0.0 T 22-04-2016 R615_RS13585 9e16b3da12d65895984d3307021cf804 894 PANTHER PTHR11624:SF67 75 299 0.0 T 22-04-2016 R615_RS13585 9e16b3da12d65895984d3307021cf804 894 PANTHER PTHR11624:SF67 491 540 0.0 T 22-04-2016 R615_RS13585 9e16b3da12d65895984d3307021cf804 894 PANTHER PTHR11624:SF67 791 876 0.0 T 22-04-2016 R615_RS13585 9e16b3da12d65895984d3307021cf804 894 PANTHER PTHR11624:SF67 368 465 0.0 T 22-04-2016 R615_RS13585 9e16b3da12d65895984d3307021cf804 894 Gene3D G3DSA:3.40.50.970 58 472 1.4E-146 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS13585 9e16b3da12d65895984d3307021cf804 894 SUPERFAMILY SSF52922 706 893 8.03E-46 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 R615_RS13585 9e16b3da12d65895984d3307021cf804 894 PANTHER PTHR11624 558 772 0.0 T 22-04-2016 IPR033247 Transketolase family R615_RS13585 9e16b3da12d65895984d3307021cf804 894 PANTHER PTHR11624 75 299 0.0 T 22-04-2016 IPR033247 Transketolase family R615_RS13585 9e16b3da12d65895984d3307021cf804 894 PANTHER PTHR11624 491 540 0.0 T 22-04-2016 IPR033247 Transketolase family R615_RS13585 9e16b3da12d65895984d3307021cf804 894 PANTHER PTHR11624 791 876 0.0 T 22-04-2016 IPR033247 Transketolase family R615_RS13585 9e16b3da12d65895984d3307021cf804 894 PANTHER PTHR11624 368 465 0.0 T 22-04-2016 IPR033247 Transketolase family R615_RS02790 0016d1c9999dfa9581475e731b4fd393 155 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 2 27 5.5E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS02790 0016d1c9999dfa9581475e731b4fd393 155 SUPERFAMILY SSF54523 8 121 6.36E-7 T 22-04-2016 R615_RS02790 0016d1c9999dfa9581475e731b4fd393 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 2.3E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS02790 0016d1c9999dfa9581475e731b4fd393 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 9 300 1.3E-158 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 PANTHER PTHR30075 1 318 1.4E-257 T 22-04-2016 R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 292 3.1E-150 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 2.2E-67 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 2.2E-67 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.2E-67 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 2.2E-67 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 2.2E-67 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 2.2E-67 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 SUPERFAMILY SSF55681 10 293 4.28E-134 T 22-04-2016 R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 Gene3D G3DSA:3.30.930.10 5 217 1.6E-102 T 22-04-2016 R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 294 60.417 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00090 2e1afdf1b156da8842a7576d25e67ec3 330 Gene3D G3DSA:1.20.58.180 218 299 2.9E-38 T 22-04-2016 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 Gene3D G3DSA:1.10.10.10 241 294 7.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 Gene3D G3DSA:3.40.50.2300 7 134 4.9E-38 T 22-04-2016 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 PANTHER PTHR26402:SF50 224 288 1.6E-52 T 22-04-2016 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 SUPERFAMILY SSF46894 231 294 4.76E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 271 283 5.6E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 241 255 5.6E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 255 271 5.6E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 PANTHER PTHR26402 224 288 1.6E-52 T 22-04-2016 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 PANTHER PTHR26402 8 139 1.6E-52 T 22-04-2016 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 SMART SM00421 238 295 2.6E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 Pfam PF00072 Response regulator receiver domain 10 121 3.7E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 Pfam PF00196 Bacterial regulatory proteins, luxR family 241 293 2.3E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 SMART SM00448 8 121 2.6E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 SUPERFAMILY SSF52172 7 138 2.99E-38 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS04170 e032115dc7cc511fd119ee11de9ea927 302 PANTHER PTHR26402:SF50 8 139 1.6E-52 T 22-04-2016 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 Gene3D G3DSA:1.20.1640.10 289 498 1.1E-47 T 22-04-2016 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 SUPERFAMILY SSF82714 185 267 1.57E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 PANTHER PTHR32063:SF33 7 1026 2.6E-284 T 22-04-2016 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 SUPERFAMILY SSF82693 47 136 1.88E-21 T 22-04-2016 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 SUPERFAMILY SSF82714 726 796 3.14E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 6.7E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 6.7E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 6.7E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 6.7E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 6.7E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 SUPERFAMILY SSF82866 296 490 2.22E-38 T 22-04-2016 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 Gene3D G3DSA:1.10.3850.10 804 1023 1.5E-56 T 22-04-2016 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 SUPERFAMILY SSF82693 145 183 1.12E-10 T 22-04-2016 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 SUPERFAMILY SSF82693 270 324 1.12E-10 T 22-04-2016 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 Gene3D G3DSA:3.30.2090.10 184 269 7.6E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 PANTHER PTHR32063 7 1026 2.6E-284 T 22-04-2016 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 Gene3D G3DSA:3.30.2090.10 725 796 7.3E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 Pfam PF00873 AcrB/AcrD/AcrF family 23 1021 6.4E-175 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 SUPERFAMILY SSF82866 799 1023 1.96E-46 T 22-04-2016 R615_RS10535 11c2b2af945a7f6ba2c62ac342fb5f1e 1038 Gene3D G3DSA:3.30.70.1430 48 143 2.4E-24 T 22-04-2016 R615_RS05745 5d22d09f4f24eaa714e28bdd5ab48677 114 SUPERFAMILY SSF52833 1 112 6.3E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS05745 5d22d09f4f24eaa714e28bdd5ab48677 114 Pfam PF03960 ArsC family 4 109 1.2E-15 T 22-04-2016 IPR006660 Arsenate reductase-like R615_RS05745 5d22d09f4f24eaa714e28bdd5ab48677 114 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 1 111 6.3E-30 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR R615_RS05745 5d22d09f4f24eaa714e28bdd5ab48677 114 PANTHER PTHR30041:SF3 1 114 1.3E-40 T 22-04-2016 R615_RS05745 5d22d09f4f24eaa714e28bdd5ab48677 114 Gene3D G3DSA:3.40.30.10 1 112 7.9E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS05745 5d22d09f4f24eaa714e28bdd5ab48677 114 PANTHER PTHR30041 1 114 1.3E-40 T 22-04-2016 R615_RS10475 53fafcacb39f67abae846ec12862a2d0 174 PANTHER PTHR13061 14 171 1.1E-63 T 22-04-2016 R615_RS10475 53fafcacb39f67abae846ec12862a2d0 174 SUPERFAMILY SSF51161 6 170 2.22E-46 T 22-04-2016 IPR011004 Trimeric LpxA-like R615_RS10475 53fafcacb39f67abae846ec12862a2d0 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 89 120 5.1E-8 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS10475 53fafcacb39f67abae846ec12862a2d0 174 Gene3D G3DSA:2.160.10.10 10 168 2.3E-44 T 22-04-2016 R615_RS03320 3f75a5242c31db2b75c74038aa5213f6 574 PANTHER PTHR18968 4 574 0.0 T 22-04-2016 R615_RS03320 3f75a5242c31db2b75c74038aa5213f6 574 Gene3D G3DSA:3.40.50.970 357 557 9.6E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS03320 3f75a5242c31db2b75c74038aa5213f6 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 1.1E-254 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS03320 3f75a5242c31db2b75c74038aa5213f6 574 Gene3D G3DSA:3.40.50.970 4 173 4.7E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS03320 3f75a5242c31db2b75c74038aa5213f6 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 2.1E-60 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 R615_RS03320 3f75a5242c31db2b75c74038aa5213f6 574 PANTHER PTHR18968:SF116 4 574 0.0 T 22-04-2016 R615_RS03320 3f75a5242c31db2b75c74038aa5213f6 574 SUPERFAMILY SSF52518 4 179 2.08E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS03320 3f75a5242c31db2b75c74038aa5213f6 574 Gene3D G3DSA:3.40.50.1220 190 356 7.0E-66 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain R615_RS03320 3f75a5242c31db2b75c74038aa5213f6 574 SUPERFAMILY SSF52467 190 361 5.82E-64 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain R615_RS03320 3f75a5242c31db2b75c74038aa5213f6 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 545 2.9E-47 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 R615_RS03320 3f75a5242c31db2b75c74038aa5213f6 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 8.9E-45 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 R615_RS03320 3f75a5242c31db2b75c74038aa5213f6 574 SUPERFAMILY SSF52518 373 567 3.13E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 258 4.3E-10 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 PANTHER PTHR22573 17 473 2.1E-64 T 22-04-2016 R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 SUPERFAMILY SSF53738 246 364 6.47E-5 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 SUPERFAMILY SSF53738 11 171 2.04E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 PANTHER PTHR22573:SF15 17 473 2.1E-64 T 22-04-2016 R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 SUPERFAMILY SSF55957 413 473 5.23E-12 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 376 8.7E-9 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 16 138 2.4E-28 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 472 3.8E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 Gene3D G3DSA:3.30.310.50 394 473 7.9E-12 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 SUPERFAMILY SSF53738 160 260 5.89E-14 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 104 113 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS04810 2e6bcec7ece2e7a37480586aa6ed4cb2 475 Gene3D G3DSA:3.40.120.10 14 137 2.3E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00285 7303091f74807afad4e92da431c4868e 165 SUPERFAMILY SSF88946 5 92 5.49E-16 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00285 7303091f74807afad4e92da431c4868e 165 Pfam PF08281 Sigma-70, region 4 109 158 7.5E-12 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00285 7303091f74807afad4e92da431c4868e 165 SUPERFAMILY SSF88659 104 160 1.0E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00285 7303091f74807afad4e92da431c4868e 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 160 2.1E-24 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00285 7303091f74807afad4e92da431c4868e 165 Pfam PF04542 Sigma-70 region 2 16 77 3.8E-12 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00285 7303091f74807afad4e92da431c4868e 165 Gene3D G3DSA:1.10.1740.10 4 78 2.6E-18 T 22-04-2016 R615_RS00285 7303091f74807afad4e92da431c4868e 165 PANTHER PTHR30173:SF6 2 162 7.4E-29 T 22-04-2016 R615_RS00285 7303091f74807afad4e92da431c4868e 165 Gene3D G3DSA:1.10.10.10 105 162 1.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00285 7303091f74807afad4e92da431c4868e 165 PANTHER PTHR30173 2 162 7.4E-29 T 22-04-2016 R615_RS08380 34dc904360ecffa551cb217f5c097d65 77 Pfam PF04400 Protein of unknown function (DUF539) 22 65 1.2E-15 T 22-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM R615_RS08380 34dc904360ecffa551cb217f5c097d65 77 PANTHER PTHR40691 2 77 1.9E-19 T 22-04-2016 R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.5E-20 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 112 131 1.5E-20 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 87 103 1.5E-20 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 209 227 1.5E-20 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 Gene3D G3DSA:2.30.330.10 241 321 4.9E-9 T 22-04-2016 R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 PANTHER PTHR30034 2 319 1.9E-141 T 22-04-2016 R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 PIRSF PIRSF002888 1 322 2.8E-92 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 316 1.8E-104 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 Gene3D G3DSA:3.40.1550.10 95 228 3.3E-4 T 22-04-2016 IPR028976 CheC-like domain R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 PANTHER PTHR30034:SF0 2 319 1.9E-141 T 22-04-2016 R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 SUPERFAMILY SSF103039 53 228 1.66E-20 T 22-04-2016 IPR028976 CheC-like domain R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 SUPERFAMILY SSF103039 4 13 1.66E-20 T 22-04-2016 IPR028976 CheC-like domain R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 SUPERFAMILY SSF101801 246 321 5.23E-15 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 249 316 5.4E-17 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) R615_RS05055 3cdd8b55da658e9d3687e468bf2ea0ec 322 Pfam PF02154 Flagellar motor switch protein FliM 36 227 1.2E-72 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 5 428 1.4E-121 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 Gene3D G3DSA:1.10.940.10 2 144 8.8E-32 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 SUPERFAMILY SSF53335 136 427 7.92E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 Pfam PF01189 16S rRNA methyltransferase RsmB/F 236 425 9.7E-63 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 Gene3D G3DSA:1.10.287.730 145 168 1.7E-11 T 22-04-2016 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 312 324 3.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 362 378 3.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 218 232 3.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 410 427 3.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 247 257 3.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 PANTHER PTHR22807 32 427 1.1E-110 T 22-04-2016 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 Gene3D G3DSA:3.30.70.1170 169 226 3.3E-23 T 22-04-2016 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 SUPERFAMILY SSF48013 2 145 1.14E-25 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 PANTHER PTHR22807:SF30 32 427 1.1E-110 T 22-04-2016 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 Pfam PF01029 NusB family 3 122 1.1E-15 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 R615_RS00605 f80d65d428751c07f27e6762c629f64a 433 Gene3D G3DSA:3.40.50.150 228 427 3.2E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03105 dd2571d951defc8d4d965fd6dc458dbb 113 SUPERFAMILY SSF158452 5 109 3.01E-26 T 22-04-2016 IPR023376 YqcC-like domain R615_RS03105 dd2571d951defc8d4d965fd6dc458dbb 113 Pfam PF04287 tRNA pseudouridine synthase C 9 107 7.9E-29 T 22-04-2016 IPR023376 YqcC-like domain R615_RS03105 dd2571d951defc8d4d965fd6dc458dbb 113 Gene3D G3DSA:1.20.1440.40 4 108 4.9E-27 T 22-04-2016 IPR023376 YqcC-like domain R615_RS03105 dd2571d951defc8d4d965fd6dc458dbb 113 PANTHER PTHR39586 3 113 2.5E-21 T 22-04-2016 R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 Pfam PF00990 Diguanylate cyclase, GGDEF domain 456 613 2.3E-42 T 22-04-2016 IPR000160 GGDEF domain R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 Gene3D G3DSA:3.30.70.270 457 619 1.5E-48 T 22-04-2016 R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 Pfam PF07695 7TM diverse intracellular signalling 182 385 3.1E-23 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 SMART SM00267 443 617 2.0E-52 T 22-04-2016 IPR000160 GGDEF domain R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 451 617 5.6E-47 T 22-04-2016 IPR000160 GGDEF domain R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 PANTHER PTHR10799 487 614 4.5E-24 T 22-04-2016 R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 PANTHER PTHR10799 216 394 4.5E-24 T 22-04-2016 R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 PANTHER PTHR10799 1 13 4.5E-24 T 22-04-2016 R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 Pfam PF07696 7TMR-DISM extracellular 2 52 168 3.5E-20 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 SUPERFAMILY SSF55073 459 618 5.81E-44 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 PANTHER PTHR10799:SF750 487 614 4.5E-24 T 22-04-2016 R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 PANTHER PTHR10799:SF750 216 394 4.5E-24 T 22-04-2016 R615_RS03750 6e195c50ea1404d93cf2d61e322949bb 630 PANTHER PTHR10799:SF750 1 13 4.5E-24 T 22-04-2016 R615_RS14110 0387b9ba5f9b5203abcf611266c3c3c1 797 Pfam PF03968 OstA-like protein 61 195 2.2E-9 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal R615_RS14110 0387b9ba5f9b5203abcf611266c3c3c1 797 Pfam PF04453 Organic solvent tolerance protein 302 697 3.5E-72 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 R615_RS14110 0387b9ba5f9b5203abcf611266c3c3c1 797 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 11 773 17.87 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 R615_RS14110 0387b9ba5f9b5203abcf611266c3c3c1 797 PANTHER PTHR30189 47 796 2.6E-53 T 22-04-2016 R615_RS14110 0387b9ba5f9b5203abcf611266c3c3c1 797 Gene3D G3DSA:2.60.450.10 58 207 7.1E-14 T 22-04-2016 R615_RS11045 a305e32392dbecb14c648dbc2d4e642b 309 Pfam PF05971 Protein of unknown function (DUF890) 19 309 2.4E-110 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 R615_RS11045 a305e32392dbecb14c648dbc2d4e642b 309 PANTHER PTHR13393 4 309 6.0E-111 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 R615_RS11045 a305e32392dbecb14c648dbc2d4e642b 309 PANTHER PTHR13393:SF0 4 309 6.0E-111 T 22-04-2016 R615_RS11045 a305e32392dbecb14c648dbc2d4e642b 309 SUPERFAMILY SSF53335 56 309 3.07E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS11045 a305e32392dbecb14c648dbc2d4e642b 309 PIRSF PIRSF029038 5 309 1.1E-122 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 R615_RS11045 a305e32392dbecb14c648dbc2d4e642b 309 Gene3D G3DSA:3.40.50.150 110 300 7.9E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS11045 a305e32392dbecb14c648dbc2d4e642b 309 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 17 309 47.987 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Gene3D G3DSA:3.40.50.300 12 75 4.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Gene3D G3DSA:3.40.50.300 361 466 4.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Gene3D G3DSA:3.40.50.300 128 158 4.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 SUPERFAMILY SSF52540 12 73 1.46E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 SUPERFAMILY SSF52540 335 487 1.46E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 SUPERFAMILY SSF52540 126 210 1.46E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 SUPERFAMILY SSF52540 545 852 1.46E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Gene3D G3DSA:3.90.320.10 905 1181 8.6E-74 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Gene3D G3DSA:3.90.320.10 1235 1247 8.6E-74 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 PANTHER PTHR11070:SF23 1 82 1.0E-258 T 22-04-2016 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 PANTHER PTHR11070:SF23 126 223 1.0E-258 T 22-04-2016 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 PANTHER PTHR11070:SF23 819 1182 1.0E-258 T 22-04-2016 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 PANTHER PTHR11070:SF23 310 505 1.0E-258 T 22-04-2016 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 PANTHER PTHR11070:SF23 540 800 1.0E-258 T 22-04-2016 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 5 1185 4.5E-274 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 1 1259 13.755 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Gene3D G3DSA:1.10.486.10 606 750 1.9E-44 T 22-04-2016 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Gene3D G3DSA:1.10.3170.10 163 356 5.4E-38 T 22-04-2016 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 PANTHER PTHR11070 1 82 1.0E-258 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 PANTHER PTHR11070 126 223 1.0E-258 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 PANTHER PTHR11070 819 1182 1.0E-258 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 PANTHER PTHR11070 310 505 1.0E-258 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 PANTHER PTHR11070 540 800 1.0E-258 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Pfam PF13361 UvrD-like helicase C-terminal domain 460 842 1.2E-22 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Pfam PF12705 PD-(D/E)XK nuclease superfamily 989 1220 1.1E-6 T 22-04-2016 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 451 2.6E-56 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Gene3D G3DSA:3.40.50.300 751 856 3.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 Gene3D G3DSA:3.40.50.300 467 603 3.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09895 6360e52ab1b87bd82f040ebe173095ce 1263 SUPERFAMILY SSF52980 915 1182 1.34E-62 T 22-04-2016 IPR011335 Restriction endonuclease type II-like R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 SUPERFAMILY SSF51905 144 311 4.81E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PRINTS PR00397 Sirohaem Fe-binding site signature 642 660 4.8E-7 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PRINTS PR00397 Sirohaem Fe-binding site signature 685 703 4.8E-7 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PANTHER PTHR11493:SF52 425 840 3.1E-288 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PANTHER PTHR11493:SF52 2 255 3.1E-288 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 SUPERFAMILY SSF51905 2 189 1.21E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 Gene3D G3DSA:3.50.50.60 2 105 3.8E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 Gene3D G3DSA:3.50.50.60 106 307 4.5E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 806 0.0 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 Pfam PF04324 BFD-like [2Fe-2S] binding domain 430 477 2.6E-9 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 Pfam PF04324 BFD-like [2Fe-2S] binding domain 492 539 1.3E-4 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 SUPERFAMILY SSF56014 639 815 2.36E-51 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 SUPERFAMILY SSF55124 511 647 1.8E-24 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 638 774 2.5E-20 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 291 7.9E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 566 627 4.9E-10 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 3.7E-10 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 3.7E-10 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.7E-10 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 3.7E-10 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 4.3E-17 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.3E-17 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 4.3E-17 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 4.3E-17 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.3E-17 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 685 701 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 Gene3D G3DSA:3.30.413.10 638 774 1.1E-35 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PIRSF PIRSF037149 1 841 0.0 T 22-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PANTHER PTHR11493 425 840 3.1E-288 T 22-04-2016 R615_RS10030 2ad082e148cc699be969c7077efcaea2 852 PANTHER PTHR11493 2 255 3.1E-288 T 22-04-2016 R615_RS01860 6433486c836ea5df6b9f4e2dbbaaf9e3 410 Gene3D G3DSA:1.20.810.10 9 405 3.1E-156 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain R615_RS01860 6433486c836ea5df6b9f4e2dbbaaf9e3 410 PIRSF PIRSF038885 1 410 3.3E-157 T 22-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 R615_RS01860 6433486c836ea5df6b9f4e2dbbaaf9e3 410 PANTHER PTHR19271 6 406 9.7E-241 T 22-04-2016 R615_RS01860 6433486c836ea5df6b9f4e2dbbaaf9e3 410 Pfam PF00033 Cytochrome b/b6/petB 28 216 1.3E-63 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 R615_RS01860 6433486c836ea5df6b9f4e2dbbaaf9e3 410 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 282 384 1.4E-41 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 R615_RS01860 6433486c836ea5df6b9f4e2dbbaaf9e3 410 PANTHER PTHR19271:SF9 6 406 9.7E-241 T 22-04-2016 R615_RS01860 6433486c836ea5df6b9f4e2dbbaaf9e3 410 SUPERFAMILY SSF81342 10 284 5.02E-91 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 R615_RS01860 6433486c836ea5df6b9f4e2dbbaaf9e3 410 SUPERFAMILY SSF81648 286 401 6.76E-34 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 R615_RS01315 c810ac632b94f5e750598155671a469e 335 SUPERFAMILY SSF46785 14 203 1.43E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS01315 c810ac632b94f5e750598155671a469e 335 Pfam PF12840 Helix-turn-helix domain 16 73 4.1E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS01315 c810ac632b94f5e750598155671a469e 335 Gene3D G3DSA:3.40.50.150 164 308 8.8E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS01315 c810ac632b94f5e750598155671a469e 335 PANTHER PTHR10108 37 307 8.9E-25 T 22-04-2016 R615_RS01315 c810ac632b94f5e750598155671a469e 335 SMART SM00418 16 102 1.1E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS01315 c810ac632b94f5e750598155671a469e 335 Pfam PF13489 Methyltransferase domain 163 283 5.3E-17 T 22-04-2016 R615_RS01315 c810ac632b94f5e750598155671a469e 335 Gene3D G3DSA:1.10.10.10 10 80 9.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS01315 c810ac632b94f5e750598155671a469e 335 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 9.2E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS01315 c810ac632b94f5e750598155671a469e 335 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 9.2E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS01315 c810ac632b94f5e750598155671a469e 335 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 9.2E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS01315 c810ac632b94f5e750598155671a469e 335 PANTHER PTHR10108:SF820 37 307 8.9E-25 T 22-04-2016 R615_RS01315 c810ac632b94f5e750598155671a469e 335 SUPERFAMILY SSF53335 157 309 1.84E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS07640 abf38ff7bc34936b4e54fff0185e969d 460 Pfam PF00919 Uncharacterized protein family UPF0004 23 109 7.2E-22 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 R615_RS07640 abf38ff7bc34936b4e54fff0185e969d 460 SUPERFAMILY SSF102114 131 387 2.88E-48 T 22-04-2016 R615_RS07640 abf38ff7bc34936b4e54fff0185e969d 460 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 23 454 2.1E-178 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 R615_RS07640 abf38ff7bc34936b4e54fff0185e969d 460 Pfam PF04055 Radical SAM superfamily 163 340 7.1E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 R615_RS07640 abf38ff7bc34936b4e54fff0185e969d 460 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 161 181 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 R615_RS07640 abf38ff7bc34936b4e54fff0185e969d 460 Gene3D G3DSA:3.80.30.20 155 392 1.7E-69 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe R615_RS07640 abf38ff7bc34936b4e54fff0185e969d 460 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 22 457 60.125 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 R615_RS07640 abf38ff7bc34936b4e54fff0185e969d 460 SMART SM00729 157 382 2.2E-51 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 R615_RS07640 abf38ff7bc34936b4e54fff0185e969d 460 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 23 455 3.4E-104 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 R615_RS07640 abf38ff7bc34936b4e54fff0185e969d 460 PANTHER PTHR11918 23 460 5.4E-232 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein R615_RS07640 abf38ff7bc34936b4e54fff0185e969d 460 Gene3D G3DSA:2.40.50.140 397 459 2.9E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS07640 abf38ff7bc34936b4e54fff0185e969d 460 PANTHER PTHR11918:SF57 23 460 5.4E-232 T 22-04-2016 R615_RS03735 9cc6e76710d48b55e7890aa79924b2ef 333 PANTHER PTHR11019:SF46 242 330 6.3E-19 T 22-04-2016 R615_RS03735 9cc6e76710d48b55e7890aa79924b2ef 333 Pfam PF12833 Helix-turn-helix domain 254 329 6.0E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS03735 9cc6e76710d48b55e7890aa79924b2ef 333 SMART SM00342 247 329 3.7E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS03735 9cc6e76710d48b55e7890aa79924b2ef 333 PANTHER PTHR11019 242 330 6.3E-19 T 22-04-2016 R615_RS03735 9cc6e76710d48b55e7890aa79924b2ef 333 Gene3D G3DSA:1.10.10.60 283 330 2.2E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS03735 9cc6e76710d48b55e7890aa79924b2ef 333 SUPERFAMILY SSF46689 283 330 3.58E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS03735 9cc6e76710d48b55e7890aa79924b2ef 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 25 200 2.4E-25 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS03735 9cc6e76710d48b55e7890aa79924b2ef 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 313 3.6E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS03735 9cc6e76710d48b55e7890aa79924b2ef 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 313 329 3.6E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 SUPERFAMILY SSF52540 227 522 2.45E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 Gene3D G3DSA:3.40.50.300 561 694 5.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 PANTHER PTHR30195 3 283 5.5E-261 T 22-04-2016 R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 PANTHER PTHR30195 306 997 5.5E-261 T 22-04-2016 R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 SMART SM00487 265 500 1.2E-9 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 208 6.3E-42 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 5 720 3.4E-190 T 22-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 PANTHER PTHR30195:SF15 3 283 5.5E-261 T 22-04-2016 R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 PANTHER PTHR30195:SF15 306 997 5.5E-261 T 22-04-2016 R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 Gene3D G3DSA:3.40.50.300 277 479 7.2E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 Pfam PF11867 Domain of unknown function (DUF3387) 721 1049 1.7E-112 T 22-04-2016 IPR021810 Protein of unknown function DUF3387 R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 Pfam PF04851 Type III restriction enzyme, res subunit 297 467 2.0E-14 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 SUPERFAMILY SSF52540 555 703 2.25E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06365 cb412e5cad7232b7867a450c48c6362a 1053 SUPERFAMILY SSF52540 419 499 2.25E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06930 5c4c5fa1421eeb63d2d03cf89209dd35 202 Gene3D G3DSA:3.20.20.70 8 199 5.8E-70 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS06930 5c4c5fa1421eeb63d2d03cf89209dd35 202 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 22-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 R615_RS06930 5c4c5fa1421eeb63d2d03cf89209dd35 202 PANTHER PTHR30246 6 199 1.5E-88 T 22-04-2016 R615_RS06930 5c4c5fa1421eeb63d2d03cf89209dd35 202 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 8 199 3.3E-72 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 R615_RS06930 5c4c5fa1421eeb63d2d03cf89209dd35 202 Pfam PF01081 KDPG and KHG aldolase 8 197 9.6E-69 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 R615_RS06930 5c4c5fa1421eeb63d2d03cf89209dd35 202 PANTHER PTHR30246:SF0 6 199 1.5E-88 T 22-04-2016 R615_RS06930 5c4c5fa1421eeb63d2d03cf89209dd35 202 SUPERFAMILY SSF51569 8 199 1.19E-62 T 22-04-2016 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 Pfam PF00549 CoA-ligase 151 271 3.4E-21 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.1E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.1E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.1E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.1E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 SUPERFAMILY SSF52210 123 287 1.02E-56 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 SMART SM00881 4 100 2.3E-37 T 22-04-2016 IPR003781 CoA-binding GO:0048037 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 PIRSF PIRSF001553 1 289 1.2E-132 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 Pfam PF02629 CoA binding domain 6 99 3.6E-31 T 22-04-2016 IPR003781 CoA-binding GO:0048037 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 PANTHER PTHR11117 1 287 1.2E-195 T 22-04-2016 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 Gene3D G3DSA:3.40.50.720 2 119 3.3E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 SUPERFAMILY SSF51735 1 122 9.31E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 3.6E-143 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 R615_RS09770 148b0a8dd1bb7a8f457d08c9c26e419f 290 Gene3D G3DSA:3.40.50.261 120 287 1.9E-77 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 SMART SM00958 228 361 4.3E-74 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 Pfam PF07516 SecA Wing and Scaffold domain 621 832 7.7E-68 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 835 19.928 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 ProSitePatterns PS01312 SecA family signature. 503 518 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 Gene3D G3DSA:1.10.3060.10 651 833 1.7E-59 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 PRINTS PR00906 SecA protein signature 170 190 3.4E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 PRINTS PR00906 SecA protein signature 379 396 3.4E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 PRINTS PR00906 SecA protein signature 416 429 3.4E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 PRINTS PR00906 SecA protein signature 342 364 3.4E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 PRINTS PR00906 SecA protein signature 63 87 3.4E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 PRINTS PR00906 SecA protein signature 101 115 3.4E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 PRINTS PR00906 SecA protein signature 117 127 3.4E-67 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 Pfam PF07517 SecA DEAD-like domain 7 404 7.5E-133 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 SUPERFAMILY SSF52540 421 621 8.49E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 821 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 SMART SM00957 6 405 1.4E-299 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 Pfam PF02810 SEC-C motif 893 911 3.1E-9 T 22-04-2016 IPR004027 SEC-C motif R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 Gene3D G3DSA:3.90.1440.10 230 371 2.7E-45 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 SUPERFAMILY SSF81886 889 901 4.32E-82 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 SUPERFAMILY SSF81886 623 843 4.32E-82 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 SUPERFAMILY SSF81767 230 371 1.23E-41 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 Gene3D G3DSA:3.40.50.300 4 228 4.7E-128 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 Gene3D G3DSA:3.40.50.300 372 419 4.7E-128 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 Gene3D G3DSA:3.40.50.300 421 622 2.0E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 PANTHER PTHR30612 5 523 0.0 T 22-04-2016 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 PANTHER PTHR30612 553 913 0.0 T 22-04-2016 R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 SUPERFAMILY SSF52540 4 228 1.46E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 SUPERFAMILY SSF52540 371 418 1.46E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13075 b2245ae028c15b537a8c66657e7e94a7 913 Pfam PF01043 SecA preprotein cross-linking domain 232 361 5.4E-37 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 R615_RS15675 745eed44bcab9ea22454c93fb6fd8a31 107 SUPERFAMILY SSF57716 78 106 5.42E-6 T 22-04-2016 R615_RS15675 745eed44bcab9ea22454c93fb6fd8a31 107 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 81 105 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site R615_RS15675 745eed44bcab9ea22454c93fb6fd8a31 107 SUPERFAMILY SSF109635 4 77 5.89E-9 T 22-04-2016 R615_RS15675 745eed44bcab9ea22454c93fb6fd8a31 107 PANTHER PTHR33823 4 107 1.3E-21 T 22-04-2016 R615_RS15675 745eed44bcab9ea22454c93fb6fd8a31 107 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 76 106 1.8E-9 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 R615_RS02560 ae9a4b633e2e12973b84741ca8841cf4 449 PANTHER PTHR13734 2 268 2.5E-120 T 22-04-2016 R615_RS02560 ae9a4b633e2e12973b84741ca8841cf4 449 Gene3D G3DSA:3.30.460.10 36 183 1.2E-46 T 22-04-2016 R615_RS02560 ae9a4b633e2e12973b84741ca8841cf4 449 SUPERFAMILY SSF81891 183 415 1.83E-47 T 22-04-2016 R615_RS02560 ae9a4b633e2e12973b84741ca8841cf4 449 Pfam PF01743 Poly A polymerase head domain 54 184 1.3E-33 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 R615_RS02560 ae9a4b633e2e12973b84741ca8841cf4 449 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 15 442 36.77 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 R615_RS02560 ae9a4b633e2e12973b84741ca8841cf4 449 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 211 272 1.7E-21 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain R615_RS02560 ae9a4b633e2e12973b84741ca8841cf4 449 PANTHER PTHR13734:SF47 2 268 2.5E-120 T 22-04-2016 R615_RS02560 ae9a4b633e2e12973b84741ca8841cf4 449 Gene3D G3DSA:1.10.3090.10 184 416 1.0E-47 T 22-04-2016 R615_RS02560 ae9a4b633e2e12973b84741ca8841cf4 449 Pfam PF12626 Polymerase A arginine-rich C-terminus 326 443 1.4E-36 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain R615_RS02560 ae9a4b633e2e12973b84741ca8841cf4 449 SUPERFAMILY SSF81301 27 181 6.43E-39 T 22-04-2016 R615_RS02560 ae9a4b633e2e12973b84741ca8841cf4 449 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 442 5.8E-154 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.2E-35 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 SUPERFAMILY SSF52540 6 288 1.31E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 696 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 SUPERFAMILY SSF54980 609 695 7.19E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 Gene3D G3DSA:3.40.50.300 6 293 2.0E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.8E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 Pfam PF00679 Elongation factor G C-terminus 606 692 3.2E-28 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 Pfam PF14492 Elongation Factor G, domain II 411 485 8.4E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 SUPERFAMILY SSF50447 271 411 3.3E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 SUPERFAMILY SSF54211 489 603 9.86E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 SMART SM00838 606 693 1.0E-53 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 Gene3D G3DSA:2.40.30.10 315 411 1.9E-35 T 22-04-2016 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 Gene3D G3DSA:3.30.70.240 606 690 4.6E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 Gene3D G3DSA:3.30.230.10 491 605 4.7E-46 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 Gene3D G3DSA:3.30.70.870 412 487 1.8E-38 T 22-04-2016 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 PANTHER PTHR23115:SF66 310 697 0.0 T 22-04-2016 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.2E-68 T 22-04-2016 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 PANTHER PTHR23115 3 184 0.0 T 22-04-2016 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 PANTHER PTHR23115 310 697 0.0 T 22-04-2016 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.0E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.0E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.0E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.0E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.0E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 PANTHER PTHR23115:SF66 3 184 0.0 T 22-04-2016 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 109.04 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 Pfam PF03764 Elongation factor G, domain IV 486 602 1.7E-44 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 SUPERFAMILY SSF54980 409 487 2.88E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain R615_RS15890 430ec45503a316e1b5c429c0241a6997 697 SMART SM00889 487 604 8.1E-69 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 R615_RS04605 8a8561a31fcf3ff1782b624063ea677f 309 SMART SM00448 179 300 2.9E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS04605 8a8561a31fcf3ff1782b624063ea677f 309 SMART SM00260 17 153 1.6E-17 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS04605 8a8561a31fcf3ff1782b624063ea677f 309 SUPERFAMILY SSF52172 178 304 1.42E-24 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS04605 8a8561a31fcf3ff1782b624063ea677f 309 Pfam PF01584 CheW-like domain 21 156 7.2E-32 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS04605 8a8561a31fcf3ff1782b624063ea677f 309 Gene3D G3DSA:3.40.50.2300 179 305 3.8E-26 T 22-04-2016 R615_RS04605 8a8561a31fcf3ff1782b624063ea677f 309 PANTHER PTHR22617:SF30 1 169 1.3E-89 T 22-04-2016 R615_RS04605 8a8561a31fcf3ff1782b624063ea677f 309 PANTHER PTHR22617 1 169 1.3E-89 T 22-04-2016 R615_RS04605 8a8561a31fcf3ff1782b624063ea677f 309 Pfam PF00072 Response regulator receiver domain 181 297 2.2E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS04605 8a8561a31fcf3ff1782b624063ea677f 309 PIRSF PIRSF002867 1 307 3.2E-104 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV R615_RS04605 8a8561a31fcf3ff1782b624063ea677f 309 SUPERFAMILY SSF50341 16 156 2.35E-32 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS04605 8a8561a31fcf3ff1782b624063ea677f 309 Gene3D G3DSA:2.30.30.40 92 140 2.4E-5 T 22-04-2016 R615_RS17130 90831da112373dee07815d69eb4a8141 1218 SUPERFAMILY SSF52540 732 825 2.18E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17130 90831da112373dee07815d69eb4a8141 1218 SUPERFAMILY SSF52540 508 634 2.18E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17130 90831da112373dee07815d69eb4a8141 1218 Pfam PF00271 Helicase conserved C-terminal domain 931 1031 8.9E-9 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS17130 90831da112373dee07815d69eb4a8141 1218 Gene3D G3DSA:3.40.50.300 546 623 2.7E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17130 90831da112373dee07815d69eb4a8141 1218 Gene3D G3DSA:3.40.50.300 725 831 2.7E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17130 90831da112373dee07815d69eb4a8141 1218 SMART SM00490 950 1033 7.2E-4 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS17130 90831da112373dee07815d69eb4a8141 1218 SUPERFAMILY SSF52540 546 608 1.26E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17130 90831da112373dee07815d69eb4a8141 1218 SUPERFAMILY SSF52540 949 1075 1.26E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17130 90831da112373dee07815d69eb4a8141 1218 Gene3D G3DSA:3.40.50.300 957 1059 4.9E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 Gene3D G3DSA:3.40.50.720 120 297 5.7E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 PANTHER PTHR10996 1 369 1.3E-233 T 22-04-2016 R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.2E-36 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 Gene3D G3DSA:3.40.50.720 8 119 9.7E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 6.2E-51 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 Gene3D G3DSA:3.30.70.260 324 408 1.3E-26 T 22-04-2016 R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 SUPERFAMILY SSF55021 334 408 4.96E-17 T 22-04-2016 R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 SUPERFAMILY SSF52283 7 135 9.57E-51 T 22-04-2016 R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 PANTHER PTHR10996:SF18 1 369 1.3E-233 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 R615_RS14975 5c9a302302658648dfa62184e4440d2f 409 SUPERFAMILY SSF51735 108 295 4.11E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08420 362c97563c46d2298cb23b3810840bd5 367 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 360 38.341 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 R615_RS08420 362c97563c46d2298cb23b3810840bd5 367 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 8 359 1.3E-137 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 R615_RS08420 362c97563c46d2298cb23b3810840bd5 367 Pfam PF03054 tRNA methyl transferase 8 359 3.4E-133 T 22-04-2016 R615_RS08420 362c97563c46d2298cb23b3810840bd5 367 Gene3D G3DSA:2.40.30.10 282 364 6.9E-30 T 22-04-2016 R615_RS08420 362c97563c46d2298cb23b3810840bd5 367 PANTHER PTHR11933 1 362 2.7E-193 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 R615_RS08420 362c97563c46d2298cb23b3810840bd5 367 PANTHER PTHR11933:SF10 1 362 2.7E-193 T 22-04-2016 R615_RS08420 362c97563c46d2298cb23b3810840bd5 367 SUPERFAMILY SSF52402 8 295 6.84E-55 T 22-04-2016 R615_RS08420 362c97563c46d2298cb23b3810840bd5 367 Gene3D G3DSA:3.40.50.620 5 212 8.4E-95 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS08420 362c97563c46d2298cb23b3810840bd5 367 Gene3D G3DSA:2.30.30.280 213 280 1.3E-30 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 R615_RS16250 8e60e4cc123413f185784d35cc0d6019 132 Pfam PF06339 Ectoine synthase 1 125 2.5E-61 T 22-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 R615_RS16250 8e60e4cc123413f185784d35cc0d6019 132 PANTHER PTHR39289 1 128 4.0E-48 T 22-04-2016 R615_RS16250 8e60e4cc123413f185784d35cc0d6019 132 Hamap MF_01255 L-ectoine synthase [ectC]. 1 127 38.199 T 22-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 R615_RS16250 8e60e4cc123413f185784d35cc0d6019 132 Gene3D G3DSA:2.60.120.10 18 110 5.6E-15 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS16250 8e60e4cc123413f185784d35cc0d6019 132 PANTHER PTHR39289:SF1 1 128 4.0E-48 T 22-04-2016 R615_RS16250 8e60e4cc123413f185784d35cc0d6019 132 SUPERFAMILY SSF51182 18 126 8.91E-21 T 22-04-2016 IPR011051 RmlC-like cupin domain R615_RS16250 8e60e4cc123413f185784d35cc0d6019 132 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 117 5.0E-45 T 22-04-2016 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00067 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 SUPERFAMILY SSF55681 244 527 1.4E-99 T 22-04-2016 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 Gene3D G3DSA:3.30.54.20 131 188 7.2E-19 T 22-04-2016 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 5.3E-11 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 2.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 2.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 2.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 2.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 2.3E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 Gene3D G3DSA:3.10.20.30 1 63 3.6E-20 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 1.6E-223 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 Gene3D G3DSA:3.30.930.10 243 531 7.0E-124 T 22-04-2016 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 SMART SM00863 171 220 7.1E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 Pfam PF02824 TGS domain 4 61 8.1E-9 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 SUPERFAMILY SSF81271 3 61 2.91E-14 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 SUPERFAMILY SSF55186 64 242 6.8E-62 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 Pfam PF03129 Anticodon binding domain 542 629 1.3E-21 T 22-04-2016 IPR004154 Anticodon-binding R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 PANTHER PTHR11451 1 643 0.0 T 22-04-2016 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 Gene3D G3DSA:3.40.50.800 532 636 2.6E-34 T 22-04-2016 IPR004154 Anticodon-binding R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 Gene3D G3DSA:3.30.980.10 189 225 2.7E-38 T 22-04-2016 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 Gene3D G3DSA:3.30.980.10 66 129 2.7E-38 T 22-04-2016 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 SUPERFAMILY SSF52954 530 635 6.95E-32 T 22-04-2016 IPR004154 Anticodon-binding R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 PANTHER PTHR11451:SF31 1 643 0.0 T 22-04-2016 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 635 34.171 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 R615_RS06550 8952955ba1a91ffa73706194e8c13a57 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 322 530 2.3E-46 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS08620 4643d49c91fff94104d9118694b4fd42 143 SUPERFAMILY SSF54523 36 139 3.19E-29 T 22-04-2016 R615_RS08620 4643d49c91fff94104d9118694b4fd42 143 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 28 3.5E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS08620 4643d49c91fff94104d9118694b4fd42 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 9.9E-17 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 R615_RS08620 4643d49c91fff94104d9118694b4fd42 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 9.9E-17 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 R615_RS08620 4643d49c91fff94104d9118694b4fd42 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 4.3E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS08620 4643d49c91fff94104d9118694b4fd42 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS08620 4643d49c91fff94104d9118694b4fd42 143 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 140 7.6E-46 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 R615_RS08620 4643d49c91fff94104d9118694b4fd42 143 PANTHER PTHR30093 1 143 2.9E-48 T 22-04-2016 R615_RS08620 4643d49c91fff94104d9118694b4fd42 143 Pfam PF08334 Type II secretion system (T2SS), protein G 32 140 9.2E-33 T 22-04-2016 IPR013545 Type II secretion system protein G R615_RS08620 4643d49c91fff94104d9118694b4fd42 143 PANTHER PTHR30093:SF9 1 143 2.9E-48 T 22-04-2016 R615_RS00060 c06b5397d68f5b84c8306ff77d59fe38 492 Pfam PF00924 Mechanosensitive ion channel 243 443 1.5E-40 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 R615_RS00060 c06b5397d68f5b84c8306ff77d59fe38 492 PANTHER PTHR30460 190 478 6.2E-92 T 22-04-2016 R615_RS00060 c06b5397d68f5b84c8306ff77d59fe38 492 Gene3D G3DSA:2.30.30.60 303 347 1.7E-12 T 22-04-2016 R615_RS00060 c06b5397d68f5b84c8306ff77d59fe38 492 SUPERFAMILY SSF82861 200 284 5.49E-13 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 R615_RS00060 c06b5397d68f5b84c8306ff77d59fe38 492 Gene3D G3DSA:3.30.70.100 357 441 6.1E-13 T 22-04-2016 R615_RS00060 c06b5397d68f5b84c8306ff77d59fe38 492 SUPERFAMILY SSF50182 286 348 6.87E-12 T 22-04-2016 IPR010920 LSM domain R615_RS00060 c06b5397d68f5b84c8306ff77d59fe38 492 SUPERFAMILY SSF82689 351 454 1.44E-22 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 R615_RS00060 c06b5397d68f5b84c8306ff77d59fe38 492 PANTHER PTHR30460:SF0 190 478 6.2E-92 T 22-04-2016 R615_RS17535 61b5cd56f363011fec25792aa528f92b 303 PANTHER PTHR32089 1 135 9.2E-18 T 22-04-2016 R615_RS17535 61b5cd56f363011fec25792aa528f92b 303 Gene3D G3DSA:1.10.287.950 1 96 8.3E-13 T 22-04-2016 R615_RS17535 61b5cd56f363011fec25792aa528f92b 303 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 1 127 1.1E-13 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS17535 61b5cd56f363011fec25792aa528f92b 303 SUPERFAMILY SSF58104 1 132 1.31E-17 T 22-04-2016 R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 Pfam PF01645 Conserved region in glutamate synthase 794 1157 9.3E-148 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 Gene3D G3DSA:3.20.20.70 450 783 3.6E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 Pfam PF01493 GXGXG motif 1238 1425 1.9E-78 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 Gene3D G3DSA:3.60.20.10 15 437 4.4E-165 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 Pfam PF04898 Glutamate synthase central domain 459 738 1.3E-105 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 Pfam PF00310 Glutamine amidotransferases class-II 15 428 5.4E-168 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 PANTHER PTHR11938:SF1 4 1480 0.0 T 22-04-2016 R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 Gene3D G3DSA:2.160.20.60 1213 1468 3.8E-95 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 SUPERFAMILY SSF56235 15 432 2.32E-146 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 SUPERFAMILY SSF51395 454 1189 1.47E-246 T 22-04-2016 R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 Gene3D G3DSA:3.20.20.70 813 1191 1.5E-162 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 SUPERFAMILY SSF69336 1215 1468 2.22E-88 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 R615_RS14920 1d81e508f4b5ff3a441ffd059779c0ea 1483 PANTHER PTHR11938 4 1480 0.0 T 22-04-2016 R615_RS15225 f40d992963c832d1817f16d75fd704cf 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 2.1E-30 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 R615_RS15225 f40d992963c832d1817f16d75fd704cf 135 PANTHER PTHR30558:SF3 8 135 7.7E-27 T 22-04-2016 R615_RS15225 f40d992963c832d1817f16d75fd704cf 135 PANTHER PTHR30558 8 135 7.7E-27 T 22-04-2016 R615_RS11960 f026bedf2c61ef528a98f3d75586bf58 317 PANTHER PTHR30068:SF3 1 267 2.9E-89 T 22-04-2016 R615_RS11960 f026bedf2c61ef528a98f3d75586bf58 317 PANTHER PTHR30068 1 267 2.9E-89 T 22-04-2016 R615_RS11960 f026bedf2c61ef528a98f3d75586bf58 317 Pfam PF01553 Acyltransferase 25 128 7.0E-8 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS11960 f026bedf2c61ef528a98f3d75586bf58 317 SUPERFAMILY SSF69593 22 128 5.62E-7 T 22-04-2016 R615_RS03475 58ea648147702bd5cf93034adb98b2c3 314 PANTHER PTHR21708 11 309 2.4E-50 T 22-04-2016 R615_RS03475 58ea648147702bd5cf93034adb98b2c3 314 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 17 307 1.7E-53 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 R615_RS03475 58ea648147702bd5cf93034adb98b2c3 314 PANTHER PTHR21708:SF24 11 309 2.4E-50 T 22-04-2016 R615_RS03475 58ea648147702bd5cf93034adb98b2c3 314 SUPERFAMILY SSF48179 188 307 7.82E-26 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS03475 58ea648147702bd5cf93034adb98b2c3 314 SUPERFAMILY SSF51735 16 160 5.83E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS03475 58ea648147702bd5cf93034adb98b2c3 314 Pfam PF02558 Ketopantoate reductase PanE/ApbA 17 157 7.9E-17 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 R615_RS03475 58ea648147702bd5cf93034adb98b2c3 314 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 190 307 2.8E-27 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 R615_RS03475 58ea648147702bd5cf93034adb98b2c3 314 Gene3D G3DSA:1.10.1040.10 196 307 9.4E-31 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS03475 58ea648147702bd5cf93034adb98b2c3 314 Gene3D G3DSA:3.40.50.720 17 195 4.3E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS02950 7c2b1865b0e481573fb264bb233e6f6d 400 PANTHER PTHR12526 7 379 3.4E-91 T 22-04-2016 R615_RS02950 7c2b1865b0e481573fb264bb233e6f6d 400 PANTHER PTHR12526:SF363 7 379 3.4E-91 T 22-04-2016 R615_RS02950 7c2b1865b0e481573fb264bb233e6f6d 400 Pfam PF13439 Glycosyltransferase Family 4 19 186 3.6E-22 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain R615_RS02950 7c2b1865b0e481573fb264bb233e6f6d 400 SUPERFAMILY SSF53756 8 375 4.28E-69 T 22-04-2016 R615_RS02950 7c2b1865b0e481573fb264bb233e6f6d 400 Gene3D G3DSA:3.40.50.2000 176 356 3.7E-19 T 22-04-2016 R615_RS02950 7c2b1865b0e481573fb264bb233e6f6d 400 Pfam PF00534 Glycosyl transferases group 1 196 357 2.7E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 R615_RS15505 6f1f9275d60516fee239fe42eb0939b1 323 PANTHER PTHR30468 18 319 1.2E-71 T 22-04-2016 R615_RS15505 6f1f9275d60516fee239fe42eb0939b1 323 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 20 318 8.5E-117 T 22-04-2016 IPR017804 Methyltransferase EgtD-like R615_RS15505 6f1f9275d60516fee239fe42eb0939b1 323 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 194 316 2.6E-39 T 22-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent R615_RS15505 6f1f9275d60516fee239fe42eb0939b1 323 PIRSF PIRSF018005 2 322 1.5E-111 T 22-04-2016 IPR017804 Methyltransferase EgtD-like R615_RS15505 6f1f9275d60516fee239fe42eb0939b1 323 Gene3D G3DSA:3.40.50.150 282 311 1.1E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS15505 6f1f9275d60516fee239fe42eb0939b1 323 Gene3D G3DSA:3.40.50.150 57 241 1.1E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS15505 6f1f9275d60516fee239fe42eb0939b1 323 SUPERFAMILY SSF53335 35 310 1.03E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS15505 6f1f9275d60516fee239fe42eb0939b1 323 PANTHER PTHR30468:SF6 18 319 1.2E-71 T 22-04-2016 R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 Gene3D G3DSA:3.40.50.720 232 416 2.2E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 PANTHER PTHR11374 5 423 1.4E-224 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 PIRSF PIRSF000124 6 420 2.4E-54 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 SMART SM00984 317 417 6.8E-32 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 SUPERFAMILY SSF51735 7 191 2.12E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 7 412 1.5E-118 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 7 180 9.0E-36 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 415 1.6E-19 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 SUPERFAMILY SSF48179 201 292 7.82E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 PANTHER PTHR11374:SF25 5 423 1.4E-224 T 22-04-2016 R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 SUPERFAMILY SSF52413 304 415 4.84E-26 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 202 290 1.7E-24 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 PIRSF PIRSF500136 1 423 2.4E-148 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 R615_RS06140 323c9c4b001c8303df462006aa2a52cd 424 Gene3D G3DSA:3.40.50.720 4 222 1.2E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00715 ef03cfbd4c1150e93b8de457c03c9e64 457 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 244 445 1.2E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS00715 ef03cfbd4c1150e93b8de457c03c9e64 457 PANTHER PTHR30425 153 457 4.9E-101 T 22-04-2016 R615_RS00715 ef03cfbd4c1150e93b8de457c03c9e64 457 PANTHER PTHR30425:SF3 153 457 4.9E-101 T 22-04-2016 R615_RS00715 ef03cfbd4c1150e93b8de457c03c9e64 457 Pfam PF12501 Phosphate ATP-binding cassette transporter 8 175 9.9E-31 T 22-04-2016 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 R615_RS00715 ef03cfbd4c1150e93b8de457c03c9e64 457 SUPERFAMILY SSF161098 177 444 2.22E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS00715 ef03cfbd4c1150e93b8de457c03c9e64 457 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 160 452 1.8E-88 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 R615_RS00715 ef03cfbd4c1150e93b8de457c03c9e64 457 Gene3D G3DSA:1.10.3720.10 177 456 2.1E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 Pfam PF00672 HAMP domain 158 229 2.8E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 SMART SM00086 312 354 2.2E-6 T 22-04-2016 IPR001610 PAC motif R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 Pfam PF00990 Diguanylate cyclase, GGDEF domain 365 522 1.0E-53 T 22-04-2016 IPR000160 GGDEF domain R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 PANTHER PTHR10799:SF774 245 616 7.2E-83 T 22-04-2016 R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 PANTHER PTHR10799 737 756 7.2E-83 T 22-04-2016 R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 524 1.3E-46 T 22-04-2016 IPR000160 GGDEF domain R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 Gene3D G3DSA:3.30.70.270 367 533 2.6E-61 T 22-04-2016 R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 PANTHER PTHR10799:SF774 737 756 7.2E-83 T 22-04-2016 R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 SUPERFAMILY SSF55785 248 357 2.44E-19 T 22-04-2016 IPR000014 PAS domain R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 Gene3D G3DSA:3.20.20.450 539 792 3.8E-104 T 22-04-2016 IPR001633 EAL domain R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 Pfam PF17152 Periplasmic sensor domain 41 142 6.2E-9 T 22-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 Gene3D G3DSA:3.30.450.20 235 352 2.0E-24 T 22-04-2016 R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 SUPERFAMILY SSF55073 370 528 5.81E-53 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 Pfam PF00563 EAL domain 542 779 4.2E-79 T 22-04-2016 IPR001633 EAL domain R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 SMART SM00091 240 306 6.2E-5 T 22-04-2016 IPR000014 PAS domain R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 SMART SM00267 354 526 4.7E-69 T 22-04-2016 IPR000160 GGDEF domain R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 SMART SM00052 536 784 4.0E-119 T 22-04-2016 IPR001633 EAL domain R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 SUPERFAMILY SSF141868 541 792 1.44E-93 T 22-04-2016 IPR001633 EAL domain R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 236 358 1.0E-13 T 22-04-2016 IPR000014 PAS domain R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 PANTHER PTHR10799 245 616 7.2E-83 T 22-04-2016 R615_RS01575 70d0b58cade12f600e49bdc26ff82ab1 803 Pfam PF08447 PAS fold 264 347 8.9E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 R615_RS14380 6310fdb4e71affbd5e8f0c73245919b2 161 Hamap MF_01114 Regulatory protein RecX [recX]. 3 158 15.473 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 R615_RS14380 6310fdb4e71affbd5e8f0c73245919b2 161 PANTHER PTHR33602 11 158 1.7E-38 T 22-04-2016 R615_RS14380 6310fdb4e71affbd5e8f0c73245919b2 161 Gene3D G3DSA:1.10.10.10 106 152 4.2E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS14380 6310fdb4e71affbd5e8f0c73245919b2 161 Pfam PF02631 RecX family 41 153 5.7E-31 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 R615_RS14380 6310fdb4e71affbd5e8f0c73245919b2 161 Gene3D G3DSA:1.10.10.10 14 59 9.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS14380 6310fdb4e71affbd5e8f0c73245919b2 161 PANTHER PTHR33602:SF1 11 158 1.7E-38 T 22-04-2016 R615_RS14380 6310fdb4e71affbd5e8f0c73245919b2 161 Gene3D G3DSA:1.10.10.10 60 104 4.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS04195 5a9bac0fd1ab6b695231276217f7ac2c 317 PANTHER PTHR11019:SF117 214 314 1.4E-28 T 22-04-2016 R615_RS04195 5a9bac0fd1ab6b695231276217f7ac2c 317 SUPERFAMILY SSF46689 211 260 2.24E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS04195 5a9bac0fd1ab6b695231276217f7ac2c 317 PANTHER PTHR11019 214 314 1.4E-28 T 22-04-2016 R615_RS04195 5a9bac0fd1ab6b695231276217f7ac2c 317 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 263 307 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 R615_RS04195 5a9bac0fd1ab6b695231276217f7ac2c 317 Pfam PF12833 Helix-turn-helix domain 232 313 6.1E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS04195 5a9bac0fd1ab6b695231276217f7ac2c 317 SMART SM00342 226 311 2.5E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS04195 5a9bac0fd1ab6b695231276217f7ac2c 317 Gene3D G3DSA:1.10.10.60 207 264 2.6E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS04195 5a9bac0fd1ab6b695231276217f7ac2c 317 Gene3D G3DSA:1.10.10.60 265 310 1.1E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS00940 70dd6d7e018212ec40724e663af9df00 52 ProSitePatterns PS00582 Ribosomal protein L33 signature. 18 37 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS00940 70dd6d7e018212ec40724e663af9df00 52 Pfam PF00471 Ribosomal protein L33 5 50 4.0E-17 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS00940 70dd6d7e018212ec40724e663af9df00 52 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 50 14.722 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS00940 70dd6d7e018212ec40724e663af9df00 52 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 4 52 1.2E-24 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS00940 70dd6d7e018212ec40724e663af9df00 52 SUPERFAMILY SSF57829 3 50 5.07E-18 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 R615_RS00940 70dd6d7e018212ec40724e663af9df00 52 PANTHER PTHR15238 3 52 3.9E-22 T 22-04-2016 R615_RS11030 9782469d1a562ee6759725c213026f70 472 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 240 464 3.8E-47 T 22-04-2016 R615_RS11030 9782469d1a562ee6759725c213026f70 472 PANTHER PTHR24322:SF438 238 362 1.3E-47 T 22-04-2016 R615_RS11030 9782469d1a562ee6759725c213026f70 472 PANTHER PTHR24322:SF438 378 410 1.3E-47 T 22-04-2016 R615_RS11030 9782469d1a562ee6759725c213026f70 472 Gene3D G3DSA:3.40.50.720 229 468 2.0E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS11030 9782469d1a562ee6759725c213026f70 472 PANTHER PTHR24322 238 362 1.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS11030 9782469d1a562ee6759725c213026f70 472 PANTHER PTHR24322 378 410 1.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS11030 9782469d1a562ee6759725c213026f70 472 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 305 316 2.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS11030 9782469d1a562ee6759725c213026f70 472 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 358 366 2.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS11030 9782469d1a562ee6759725c213026f70 472 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 378 397 2.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS11030 9782469d1a562ee6759725c213026f70 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 252 3.1E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS11030 9782469d1a562ee6759725c213026f70 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 378 397 3.1E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS11030 9782469d1a562ee6759725c213026f70 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 399 416 3.1E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS11030 9782469d1a562ee6759725c213026f70 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 305 316 3.1E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS11030 9782469d1a562ee6759725c213026f70 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 352 368 3.1E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS11030 9782469d1a562ee6759725c213026f70 472 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 432 452 3.1E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS11030 9782469d1a562ee6759725c213026f70 472 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 234 409 5.0E-4 T 22-04-2016 R615_RS11030 9782469d1a562ee6759725c213026f70 472 SUPERFAMILY SSF51735 230 466 2.43E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 PANTHER PTHR32282 1 943 0.0 T 22-04-2016 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Gene3D G3DSA:1.10.8.280 286 406 1.7E-43 T 22-04-2016 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Gene3D G3DSA:3.40.50.300 821 939 1.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Gene3D G3DSA:3.40.50.300 608 667 1.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Gene3D G3DSA:3.40.50.300 478 597 6.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Gene3D G3DSA:3.40.50.300 2 89 6.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Pfam PF00005 ABC transporter 623 860 1.3E-10 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 SUPERFAMILY SSF52540 426 569 5.53E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 SUPERFAMILY SSF52540 3 204 5.53E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Gene3D G3DSA:1.20.1580.10 407 477 1.4E-53 T 22-04-2016 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Gene3D G3DSA:1.20.1580.10 91 129 1.4E-53 T 22-04-2016 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Gene3D G3DSA:1.20.1580.10 251 284 1.4E-53 T 22-04-2016 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Gene3D G3DSA:1.20.1580.10 694 820 7.5E-54 T 22-04-2016 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 PANTHER PTHR32282:SF2 1 943 0.0 T 22-04-2016 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 SUPERFAMILY SSF52540 613 909 1.43E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Gene3D G3DSA:3.30.1490.20 130 153 1.3E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Gene3D G3DSA:3.30.1490.20 200 241 1.3E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS02300 c2b636e345e069f11dd14191d8147e34 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.686 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 R615_RS05495 e6297c2b5ecd2697c25668448d5a78fc 456 SUPERFAMILY SSF54368 11 98 6.02E-13 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS05495 e6297c2b5ecd2697c25668448d5a78fc 456 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 237 252 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS05495 e6297c2b5ecd2697c25668448d5a78fc 456 TIGRFAM TIGR03105 gln_synth_III: glutamine synthetase, type III 14 453 1.5E-193 T 22-04-2016 IPR017536 Glutamine synthetase, type III GO:0004356|GO:0006542 R615_RS05495 e6297c2b5ecd2697c25668448d5a78fc 456 PANTHER PTHR20852:SF7 3 456 3.9E-109 T 22-04-2016 R615_RS05495 e6297c2b5ecd2697c25668448d5a78fc 456 Gene3D G3DSA:3.30.590.10 110 443 1.2E-97 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 R615_RS05495 e6297c2b5ecd2697c25668448d5a78fc 456 Pfam PF00120 Glutamine synthetase, catalytic domain 108 452 1.5E-96 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS05495 e6297c2b5ecd2697c25668448d5a78fc 456 PANTHER PTHR20852 3 456 3.9E-109 T 22-04-2016 R615_RS05495 e6297c2b5ecd2697c25668448d5a78fc 456 SMART SM01230 106 366 3.7E-90 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS05495 e6297c2b5ecd2697c25668448d5a78fc 456 Gene3D G3DSA:3.10.20.70 11 97 8.1E-8 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS05495 e6297c2b5ecd2697c25668448d5a78fc 456 SUPERFAMILY SSF55931 107 452 2.55E-96 T 22-04-2016 R615_RS00655 09d37d309670713e7937f15db37748d8 548 SMART SM00448 11 127 1.4E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS00655 09d37d309670713e7937f15db37748d8 548 Gene3D G3DSA:1.25.40.10 141 300 9.0E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS00655 09d37d309670713e7937f15db37748d8 548 Gene3D G3DSA:1.25.40.10 449 491 9.0E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS00655 09d37d309670713e7937f15db37748d8 548 SUPERFAMILY SSF48452 173 310 1.43E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS00655 09d37d309670713e7937f15db37748d8 548 SUPERFAMILY SSF48452 334 342 1.43E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS00655 09d37d309670713e7937f15db37748d8 548 SUPERFAMILY SSF48452 271 304 9.73E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS00655 09d37d309670713e7937f15db37748d8 548 SUPERFAMILY SSF48452 389 486 9.73E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS00655 09d37d309670713e7937f15db37748d8 548 Gene3D G3DSA:3.40.50.2300 9 140 5.9E-25 T 22-04-2016 R615_RS00655 09d37d309670713e7937f15db37748d8 548 Pfam PF00072 Response regulator receiver domain 13 127 5.7E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS00655 09d37d309670713e7937f15db37748d8 548 PANTHER PTHR24423:SF374 3 138 4.0E-19 T 22-04-2016 R615_RS00655 09d37d309670713e7937f15db37748d8 548 Pfam PF13432 Tetratricopeptide repeat 241 297 5.5E-4 T 22-04-2016 R615_RS00655 09d37d309670713e7937f15db37748d8 548 PANTHER PTHR24423 3 138 4.0E-19 T 22-04-2016 R615_RS00655 09d37d309670713e7937f15db37748d8 548 SUPERFAMILY SSF52172 10 143 5.98E-25 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS10275 c8d094642d6afd71f181a148a551352b 730 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 717 189.52 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 R615_RS10275 c8d094642d6afd71f181a148a551352b 730 Gene3D G3DSA:1.10.1060.10 338 454 9.0E-19 T 22-04-2016 R615_RS10275 c8d094642d6afd71f181a148a551352b 730 Pfam PF13237 4Fe-4S dicluster domain 380 431 2.4E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain R615_RS10275 c8d094642d6afd71f181a148a551352b 730 Pfam PF13375 RnfC Barrel sandwich hybrid domain 9 109 7.1E-40 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain R615_RS10275 c8d094642d6afd71f181a148a551352b 730 PANTHER PTHR11780:SF1 1 486 1.8E-220 T 22-04-2016 R615_RS10275 c8d094642d6afd71f181a148a551352b 730 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 287 3.9E-52 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain R615_RS10275 c8d094642d6afd71f181a148a551352b 730 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 8 450 1.2E-186 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 R615_RS10275 c8d094642d6afd71f181a148a551352b 730 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 381 392 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site R615_RS10275 c8d094642d6afd71f181a148a551352b 730 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site R615_RS10275 c8d094642d6afd71f181a148a551352b 730 Pfam PF10531 SLBB domain 301 349 1.5E-10 T 22-04-2016 IPR019554 Soluble ligand binding domain R615_RS10275 c8d094642d6afd71f181a148a551352b 730 SUPERFAMILY SSF142019 89 307 7.32E-63 T 22-04-2016 R615_RS10275 c8d094642d6afd71f181a148a551352b 730 SUPERFAMILY SSF46548 339 450 1.96E-22 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 R615_RS10275 c8d094642d6afd71f181a148a551352b 730 PANTHER PTHR11780 1 486 1.8E-220 T 22-04-2016 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 SMART SM00448 764 882 3.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 Pfam PF00072 Response regulator receiver domain 766 880 2.1E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 Gene3D G3DSA:1.10.287.130 420 476 2.1E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 Gene3D G3DSA:3.40.50.2300 765 889 8.6E-34 T 22-04-2016 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 539 646 8.2E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 Pfam PF07696 7TMR-DISM extracellular 2 34 165 2.8E-21 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 588 8.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 602 8.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 627 8.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 646 8.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 Pfam PF07695 7TM diverse intracellular signalling 177 379 2.7E-32 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 SMART SM00388 426 491 2.2E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 SUPERFAMILY SSF47384 415 492 2.94E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 SUPERFAMILY SSF52172 763 885 2.28E-30 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 Gene3D G3DSA:3.30.565.10 477 646 4.4E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 PANTHER PTHR24423 763 890 7.1E-131 T 22-04-2016 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 PANTHER PTHR24423 6 17 7.1E-131 T 22-04-2016 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 PANTHER PTHR24423 396 736 7.1E-131 T 22-04-2016 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 SUPERFAMILY SSF55874 480 647 3.01E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 426 491 3.6E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS06970 0eced2537692d3e63393ed3b4e1d6380 894 SMART SM00387 538 649 3.0E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS14210 7184bc57e03236930c8d6522a879c773 147 SUPERFAMILY SSF89095 1 146 3.82E-42 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 R615_RS14210 7184bc57e03236930c8d6522a879c773 147 Gene3D G3DSA:1.10.1510.10 1 90 4.4E-30 T 22-04-2016 R615_RS14210 7184bc57e03236930c8d6522a879c773 147 PANTHER PTHR28055 1 147 1.2E-52 T 22-04-2016 R615_RS14210 7184bc57e03236930c8d6522a879c773 147 Gene3D G3DSA:1.10.10.410 91 146 4.6E-24 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal R615_RS14210 7184bc57e03236930c8d6522a879c773 147 PANTHER PTHR28055:SF1 1 147 1.2E-52 T 22-04-2016 R615_RS14210 7184bc57e03236930c8d6522a879c773 147 Pfam PF09424 Yqey-like protein 6 146 2.3E-53 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial R615_RS08375 a5a8475afbe4ed2b1dd805e18eefaf0d 349 PANTHER PTHR30040 3 343 7.4E-130 T 22-04-2016 R615_RS08375 a5a8475afbe4ed2b1dd805e18eefaf0d 349 PIRSF PIRSF006268 2 340 1.7E-87 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 R615_RS08375 a5a8475afbe4ed2b1dd805e18eefaf0d 349 PANTHER PTHR30040:SF3 3 343 7.4E-130 T 22-04-2016 R615_RS08375 a5a8475afbe4ed2b1dd805e18eefaf0d 349 Pfam PF02424 ApbE family 35 317 1.8E-79 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 R615_RS08375 a5a8475afbe4ed2b1dd805e18eefaf0d 349 SUPERFAMILY SSF143631 28 336 1.57E-94 T 22-04-2016 IPR003374 ApbE-like domain R615_RS11285 4b6eb7bdd0f50bf1a82ef337eb6ee7f3 421 PANTHER PTHR38685:SF1 213 417 4.7E-29 T 22-04-2016 R615_RS11285 4b6eb7bdd0f50bf1a82ef337eb6ee7f3 421 SUPERFAMILY SSF64383 275 411 4.71E-35 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 R615_RS11285 4b6eb7bdd0f50bf1a82ef337eb6ee7f3 421 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 278 404 2.4E-37 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 R615_RS11285 4b6eb7bdd0f50bf1a82ef337eb6ee7f3 421 PANTHER PTHR38685 213 417 4.7E-29 T 22-04-2016 R615_RS11285 4b6eb7bdd0f50bf1a82ef337eb6ee7f3 421 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 278 405 9.0E-25 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 R615_RS11285 4b6eb7bdd0f50bf1a82ef337eb6ee7f3 421 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 407 18.635 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 R615_RS11285 4b6eb7bdd0f50bf1a82ef337eb6ee7f3 421 Gene3D G3DSA:3.30.1400.10 275 411 1.8E-38 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 R615_RS11285 4b6eb7bdd0f50bf1a82ef337eb6ee7f3 421 SMART SM00771 275 405 1.1E-24 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 R615_RS06810 a36401dbdce5e5f9b8fb8ebbbd7b0999 285 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 208 279 2.0E-9 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 R615_RS06810 a36401dbdce5e5f9b8fb8ebbbd7b0999 285 SUPERFAMILY SSF74653 173 281 9.94E-19 T 22-04-2016 R615_RS06810 a36401dbdce5e5f9b8fb8ebbbd7b0999 285 Pfam PF13103 TonB C terminal 196 263 9.9E-15 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 R615_RS06810 a36401dbdce5e5f9b8fb8ebbbd7b0999 285 TIGRFAM TIGR02794 tolA_full: protein TolA 55 280 1.0E-19 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 R615_RS06810 a36401dbdce5e5f9b8fb8ebbbd7b0999 285 Gene3D G3DSA:3.30.1150.10 167 282 5.4E-25 T 22-04-2016 R615_RS07695 a2ff6df32e8ce75e09a77ccb545a0993 128 Gene3D G3DSA:4.10.520.10 30 126 8.0E-13 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 R615_RS07695 a2ff6df32e8ce75e09a77ccb545a0993 128 PANTHER PTHR33175:SF1 29 126 1.8E-19 T 22-04-2016 R615_RS07695 a2ff6df32e8ce75e09a77ccb545a0993 128 PANTHER PTHR33175 29 126 1.8E-19 T 22-04-2016 R615_RS07695 a2ff6df32e8ce75e09a77ccb545a0993 128 Pfam PF00216 Bacterial DNA-binding protein 30 126 1.2E-11 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS07695 a2ff6df32e8ce75e09a77ccb545a0993 128 SUPERFAMILY SSF47729 30 126 9.42E-10 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 R615_RS13205 2c6a2d13c402b46608e7bf300b79a7ca 397 PANTHER PTHR13693 7 385 1.4E-166 T 22-04-2016 R615_RS13205 2c6a2d13c402b46608e7bf300b79a7ca 397 Gene3D G3DSA:3.90.1150.10 272 386 4.9E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS13205 2c6a2d13c402b46608e7bf300b79a7ca 397 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 19 379 7.3E-141 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 R615_RS13205 2c6a2d13c402b46608e7bf300b79a7ca 397 SUPERFAMILY SSF53383 3 385 9.47E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS13205 2c6a2d13c402b46608e7bf300b79a7ca 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 235 244 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 R615_RS13205 2c6a2d13c402b46608e7bf300b79a7ca 397 Pfam PF00155 Aminotransferase class I and II 40 379 8.0E-55 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 R615_RS13205 2c6a2d13c402b46608e7bf300b79a7ca 397 Gene3D G3DSA:3.40.640.10 61 271 5.4E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS13205 2c6a2d13c402b46608e7bf300b79a7ca 397 PANTHER PTHR13693:SF53 7 385 1.4E-166 T 22-04-2016 R615_RS13205 2c6a2d13c402b46608e7bf300b79a7ca 397 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 383 46.682 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 R615_RS08600 bb329a668eb7cf414aafacd06e5cb71f 309 PANTHER PTHR10909 104 305 9.8E-120 T 22-04-2016 R615_RS08600 bb329a668eb7cf414aafacd06e5cb71f 309 PANTHER PTHR10909:SF294 104 305 9.8E-120 T 22-04-2016 R615_RS08600 bb329a668eb7cf414aafacd06e5cb71f 309 SMART SM00893 3 182 3.8E-53 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 R615_RS08600 bb329a668eb7cf414aafacd06e5cb71f 309 SUPERFAMILY SSF52467 187 309 1.1E-47 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain R615_RS08600 bb329a668eb7cf414aafacd06e5cb71f 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 272 8.4E-36 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal R615_RS08600 bb329a668eb7cf414aafacd06e5cb71f 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site R615_RS08600 bb329a668eb7cf414aafacd06e5cb71f 309 SUPERFAMILY SSF52402 2 186 1.09E-55 T 22-04-2016 R615_RS08600 bb329a668eb7cf414aafacd06e5cb71f 309 Gene3D G3DSA:3.40.50.1220 184 308 2.4E-60 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain R615_RS08600 bb329a668eb7cf414aafacd06e5cb71f 309 Pfam PF01012 Electron transfer flavoprotein domain 4 169 1.1E-37 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 R615_RS08600 bb329a668eb7cf414aafacd06e5cb71f 309 PIRSF PIRSF000089 1 309 3.1E-102 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 R615_RS08600 bb329a668eb7cf414aafacd06e5cb71f 309 Gene3D G3DSA:3.40.50.620 1 181 1.9E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS14980 81cf08de69812b0eb114b081b028b8da 422 SUPERFAMILY SSF109604 155 328 6.52E-35 T 22-04-2016 R615_RS14980 81cf08de69812b0eb114b081b028b8da 422 Pfam PF11871 Domain of unknown function (DUF3391) 18 134 8.0E-22 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 R615_RS14980 81cf08de69812b0eb114b081b028b8da 422 Pfam PF13487 HD domain 218 279 3.5E-12 T 22-04-2016 R615_RS14980 81cf08de69812b0eb114b081b028b8da 422 Gene3D G3DSA:1.10.3210.10 160 325 3.9E-24 T 22-04-2016 IPR006674 HD domain R615_RS14980 81cf08de69812b0eb114b081b028b8da 422 SMART SM00471 162 298 5.5E-11 T 22-04-2016 IPR003607 HD/PDEase domain R615_RS17455 837a31a3437f95bc1eac840040205d21 728 Gene3D G3DSA:4.10.1080.10 221 355 5.5E-17 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17455 837a31a3437f95bc1eac840040205d21 728 Gene3D G3DSA:4.10.1080.10 43 151 7.7E-18 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17455 837a31a3437f95bc1eac840040205d21 728 Pfam PF02412 Thrombospondin type 3 repeat 90 130 0.0012 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 Pfam PF13361 UvrD-like helicase C-terminal domain 277 622 1.5E-70 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 Gene3D G3DSA:3.40.50.300 6 110 2.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 Gene3D G3DSA:3.40.50.300 188 285 2.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 1.5E-71 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 PANTHER PTHR11070 6 515 2.7E-234 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 PANTHER PTHR11070 535 734 2.7E-234 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 Gene3D G3DSA:3.40.50.300 558 648 5.5E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 Gene3D G3DSA:3.40.50.300 286 387 5.5E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 SUPERFAMILY SSF52540 7 648 4.92E-176 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 PANTHER PTHR11070:SF7 6 515 2.7E-234 T 22-04-2016 R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 PANTHER PTHR11070:SF7 535 734 2.7E-234 T 22-04-2016 R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 Gene3D G3DSA:1.10.486.10 388 546 1.2E-45 T 22-04-2016 R615_RS16370 fd60809e8e10631b1aa839ef395e9146 736 Gene3D G3DSA:1.10.10.160 114 187 1.0E-19 T 22-04-2016 IPR013986 DExx box DNA helicase domain R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 Pfam PF03461 TRCF domain 1011 1099 4.9E-24 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 26 1112 28.621 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 Pfam PF02559 CarD-like/TRCF domain 479 574 2.7E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 SUPERFAMILY SSF52540 526 782 9.58E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 SMART SM00487 599 789 1.0E-36 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 SMART SM00490 825 909 5.4E-18 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 Gene3D G3DSA:3.40.50.300 590 785 3.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 PANTHER PTHR14025:SF21 384 1143 0.0 T 22-04-2016 R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 Pfam PF00271 Helicase conserved C-terminal domain 805 908 1.9E-17 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 SUPERFAMILY SSF52540 351 464 3.29E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 SUPERFAMILY SSF52540 12 340 1.13E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 Gene3D G3DSA:3.40.50.300 787 962 6.1E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 SUPERFAMILY SSF52540 781 989 2.27E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 PANTHER PTHR14025 384 1143 0.0 T 22-04-2016 R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 SUPERFAMILY SSF141259 470 547 4.71E-23 T 22-04-2016 IPR003711 CarD-like/TRCF domain R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 149 1080 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 SMART SM01058 478 575 3.5E-48 T 22-04-2016 IPR003711 CarD-like/TRCF domain R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 Pfam PF00270 DEAD/DEAH box helicase 604 764 2.3E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 SUPERFAMILY SSF143517 994 1145 6.8E-37 T 22-04-2016 R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 SMART SM00982 1007 1107 1.3E-40 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 R615_RS07100 f55b59eed138e60cd15293ba62b57266 1150 Gene3D G3DSA:3.30.2060.10 131 208 3.0E-10 T 22-04-2016 R615_RS04880 92e8af782ae760160ad26fd8d8fc57d3 183 Pfam PF02563 Polysaccharide biosynthesis/export protein 20 94 2.5E-20 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 R615_RS04880 92e8af782ae760160ad26fd8d8fc57d3 183 Gene3D G3DSA:3.10.560.10 95 179 2.8E-14 T 22-04-2016 R615_RS04880 92e8af782ae760160ad26fd8d8fc57d3 183 SUPERFAMILY SSF142984 98 136 8.63E-5 T 22-04-2016 R615_RS04880 92e8af782ae760160ad26fd8d8fc57d3 183 PANTHER PTHR33619 1 146 3.0E-42 T 22-04-2016 R615_RS04880 92e8af782ae760160ad26fd8d8fc57d3 183 Gene3D G3DSA:3.30.1950.10 28 94 6.6E-18 T 22-04-2016 R615_RS04880 92e8af782ae760160ad26fd8d8fc57d3 183 Pfam PF10531 SLBB domain 100 141 2.6E-12 T 22-04-2016 IPR019554 Soluble ligand binding domain R615_RS13320 ab286b0c51b17d0f521d645e283fbe14 180 Gene3D G3DSA:1.25.40.10 80 180 3.1E-36 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS13320 ab286b0c51b17d0f521d645e283fbe14 180 Gene3D G3DSA:1.20.58.320 3 79 3.7E-30 T 22-04-2016 R615_RS13320 ab286b0c51b17d0f521d645e283fbe14 180 PANTHER PTHR23004 7 180 1.2E-69 T 22-04-2016 R615_RS13320 ab286b0c51b17d0f521d645e283fbe14 180 SUPERFAMILY SSF48452 2 176 3.79E-69 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS13320 ab286b0c51b17d0f521d645e283fbe14 180 Pfam PF06041 Bacterial protein of unknown function (DUF924) 7 177 2.0E-63 T 22-04-2016 IPR010323 Protein of unknown function DUF924 R615_RS13320 ab286b0c51b17d0f521d645e283fbe14 180 PANTHER PTHR23004:SF7 7 180 1.2E-69 T 22-04-2016 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 SUPERFAMILY SSF88946 47 155 3.92E-44 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 109 122 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 Pfam PF04542 Sigma-70 region 2 85 154 1.4E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 82 307 2.5E-37 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 Gene3D G3DSA:1.10.10.10 249 315 3.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 Gene3D G3DSA:1.10.10.10 158 207 3.7E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 Pfam PF00140 Sigma-70 factor, region 1.2 47 79 2.7E-13 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 Pfam PF04539 Sigma-70 region 3 165 239 6.3E-23 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 PRINTS PR00046 Major sigma-70 factor signature 293 304 9.9E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 PRINTS PR00046 Major sigma-70 factor signature 133 141 9.9E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 PRINTS PR00046 Major sigma-70 factor signature 257 269 9.9E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 PRINTS PR00046 Major sigma-70 factor signature 278 293 9.9E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 PRINTS PR00046 Major sigma-70 factor signature 109 122 9.9E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 Gene3D G3DSA:1.10.601.10 11 154 3.6E-58 T 22-04-2016 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 SUPERFAMILY SSF88659 216 314 3.55E-25 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 PANTHER PTHR30603:SF15 5 316 7.4E-175 T 22-04-2016 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 39 318 2.5E-139 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 Pfam PF04545 Sigma-70, region 4 253 306 1.4E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 319 40.463 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 278 304 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 SUPERFAMILY SSF88659 158 232 3.92E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS02280 359f1cc5010e055f30c4e61d1819a163 322 PANTHER PTHR30603 5 316 7.4E-175 T 22-04-2016 R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 Pfam PF00107 Zinc-binding dehydrogenase 201 326 3.7E-24 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 6 373 2.4E-227 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 PANTHER PTHR11695 132 373 2.3E-217 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 PANTHER PTHR11695 19 112 2.3E-217 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 SMART SM00829 14 371 0.0017 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 SUPERFAMILY SSF50129 4 189 1.62E-75 T 22-04-2016 IPR011032 GroES-like R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 158 7.5E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 SUPERFAMILY SSF50129 322 373 4.14E-12 T 22-04-2016 IPR011032 GroES-like R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 PANTHER PTHR11695:SF560 132 373 2.3E-217 T 22-04-2016 R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 PANTHER PTHR11695:SF560 19 112 2.3E-217 T 22-04-2016 R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 SUPERFAMILY SSF51735 164 337 7.89E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 65 79 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 Gene3D G3DSA:3.90.180.10 5 193 7.7E-69 T 22-04-2016 IPR011032 GroES-like R615_RS02495 7fb9d83bebd3ac6dc978c2031b45701b 373 Gene3D G3DSA:3.40.50.720 194 313 6.7E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09820 751685f0038eae7847916e92e169da22 297 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 167 2.7E-41 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 R615_RS09820 751685f0038eae7847916e92e169da22 297 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 10 23 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 R615_RS09820 751685f0038eae7847916e92e169da22 297 PIRSF PIRSF000103 2 297 8.9E-69 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 R615_RS09820 751685f0038eae7847916e92e169da22 297 PANTHER PTHR22981:SF49 7 292 6.7E-109 T 22-04-2016 R615_RS09820 751685f0038eae7847916e92e169da22 297 SUPERFAMILY SSF48179 168 293 6.69E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS09820 751685f0038eae7847916e92e169da22 297 Gene3D G3DSA:3.40.50.720 4 171 6.6E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09820 751685f0038eae7847916e92e169da22 297 Gene3D G3DSA:1.10.1040.10 172 293 6.7E-39 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS09820 751685f0038eae7847916e92e169da22 297 PANTHER PTHR22981 7 292 6.7E-109 T 22-04-2016 R615_RS09820 751685f0038eae7847916e92e169da22 297 SUPERFAMILY SSF51735 7 169 1.34E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09820 751685f0038eae7847916e92e169da22 297 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 287 3.0E-32 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 R615_RS16245 3978c6fd627b92a3fceabf7b8f5178a6 493 Pfam PF00696 Amino acid kinase family 15 314 5.7E-18 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS16245 3978c6fd627b92a3fceabf7b8f5178a6 493 SUPERFAMILY SSF53633 15 329 6.73E-48 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS16245 3978c6fd627b92a3fceabf7b8f5178a6 493 Gene3D G3DSA:3.40.1160.10 15 67 1.7E-19 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS16245 3978c6fd627b92a3fceabf7b8f5178a6 493 Gene3D G3DSA:3.40.1160.10 147 328 1.7E-19 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS16245 3978c6fd627b92a3fceabf7b8f5178a6 493 SUPERFAMILY SSF55021 418 484 1.83E-13 T 22-04-2016 R615_RS16245 3978c6fd627b92a3fceabf7b8f5178a6 493 PANTHER PTHR21499:SF3 15 492 1.2E-56 T 22-04-2016 R615_RS16245 3978c6fd627b92a3fceabf7b8f5178a6 493 Pfam PF13840 ACT domain 418 478 1.9E-8 T 22-04-2016 IPR027795 GATS-like ACT domain R615_RS16245 3978c6fd627b92a3fceabf7b8f5178a6 493 Gene3D G3DSA:3.30.70.260 419 486 2.7E-4 T 22-04-2016 R615_RS16245 3978c6fd627b92a3fceabf7b8f5178a6 493 PANTHER PTHR21499 15 492 1.2E-56 T 22-04-2016 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 Gene3D G3DSA:1.10.601.10 110 447 3.7E-123 T 22-04-2016 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 SUPERFAMILY SSF88659 451 524 6.32E-22 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 Pfam PF04546 Sigma-70, non-essential region 137 347 1.5E-55 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 PANTHER PTHR30603:SF0 335 611 3.2E-244 T 22-04-2016 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 PANTHER PTHR30603:SF0 4 150 3.2E-244 T 22-04-2016 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 PANTHER PTHR30603 335 611 3.2E-244 T 22-04-2016 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 PANTHER PTHR30603 4 150 3.2E-244 T 22-04-2016 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 374 610 7.6E-122 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 SUPERFAMILY SSF88946 113 445 2.98E-96 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 Gene3D G3DSA:1.10.10.10 451 502 2.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 402 415 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 Pfam PF04539 Sigma-70 region 3 457 532 1.8E-31 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 3.3E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 SUPERFAMILY SSF88659 508 610 3.92E-26 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 Gene3D G3DSA:1.10.10.10 541 611 2.5E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 Pfam PF04545 Sigma-70, region 4 546 599 8.9E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 374 599 2.1E-36 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 PRINTS PR00046 Major sigma-70 factor signature 402 415 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 PRINTS PR00046 Major sigma-70 factor signature 586 597 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 PRINTS PR00046 Major sigma-70 factor signature 550 562 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 PRINTS PR00046 Major sigma-70 factor signature 426 434 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 PRINTS PR00046 Major sigma-70 factor signature 571 586 6.3E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 611 44.258 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 Pfam PF03979 Sigma-70 factor, region 1.1 5 81 1.5E-27 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 Pfam PF04542 Sigma-70 region 2 378 447 1.7E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS14220 e226d3ecb322214a40ee0d8640ed5b3d 612 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 571 597 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 SUPERFAMILY SSF52172 4 132 3.98E-25 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 SMART SM00421 149 206 2.2E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 2.9E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 SUPERFAMILY SSF46894 137 210 5.1E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 Pfam PF00072 Response regulator receiver domain 5 117 6.4E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 PANTHER PTHR26402 3 207 2.5E-77 T 22-04-2016 R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 Gene3D G3DSA:1.10.10.10 146 207 9.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 PANTHER PTHR26402:SF474 3 207 2.5E-77 T 22-04-2016 R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 SMART SM00448 3 117 6.2E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS11735 a9cdfe90139162ae9c441525fb7ee575 227 Gene3D G3DSA:3.40.50.2300 4 129 1.5E-26 T 22-04-2016 R615_RS02050 4ed2b4675f57d2292cb63add079cef1f 170 SUPERFAMILY SSF158710 24 168 5.36E-47 T 22-04-2016 R615_RS02050 4ed2b4675f57d2292cb63add079cef1f 170 Gene3D G3DSA:1.10.60.30 24 97 8.3E-28 T 22-04-2016 IPR023153 PSPTO4464-like domain R615_RS02050 4ed2b4675f57d2292cb63add079cef1f 170 PANTHER PTHR38101:SF1 3 169 3.1E-47 T 22-04-2016 R615_RS02050 4ed2b4675f57d2292cb63add079cef1f 170 Pfam PF04751 Protein of unknown function (DUF615) 15 166 2.8E-51 T 22-04-2016 IPR006839 Ribosome-associated, YjgA R615_RS02050 4ed2b4675f57d2292cb63add079cef1f 170 Gene3D G3DSA:1.10.60.30 104 169 9.0E-24 T 22-04-2016 IPR023153 PSPTO4464-like domain R615_RS02050 4ed2b4675f57d2292cb63add079cef1f 170 PIRSF PIRSF016183 1 170 6.8E-55 T 22-04-2016 IPR006839 Ribosome-associated, YjgA R615_RS02050 4ed2b4675f57d2292cb63add079cef1f 170 PANTHER PTHR38101 3 169 3.1E-47 T 22-04-2016 R615_RS17230 49682a46ab9e7e75948ff46cb4897f3b 196 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 39 82 3.9E-10 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 R615_RS17230 49682a46ab9e7e75948ff46cb4897f3b 196 Pfam PF02627 Carboxymuconolactone decarboxylase family 35 92 1.3E-8 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 R615_RS17230 49682a46ab9e7e75948ff46cb4897f3b 196 Gene3D G3DSA:1.20.1290.10 31 148 7.6E-17 T 22-04-2016 IPR029032 AhpD-like R615_RS17230 49682a46ab9e7e75948ff46cb4897f3b 196 SUPERFAMILY SSF69118 29 148 4.32E-20 T 22-04-2016 IPR029032 AhpD-like R615_RS00895 1d166d32bc7829b6166e15670e0eca9c 215 PANTHER PTHR19278 1 214 2.2E-120 T 22-04-2016 R615_RS00895 1d166d32bc7829b6166e15670e0eca9c 215 Pfam PF00156 Phosphoribosyl transferase domain 46 146 2.6E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 R615_RS00895 1d166d32bc7829b6166e15670e0eca9c 215 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 215 33.223 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS00895 1d166d32bc7829b6166e15670e0eca9c 215 SUPERFAMILY SSF53271 1 212 6.96E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS00895 1d166d32bc7829b6166e15670e0eca9c 215 Gene3D G3DSA:3.40.50.2020 6 213 5.4E-76 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS00895 1d166d32bc7829b6166e15670e0eca9c 215 PANTHER PTHR19278:SF36 1 214 2.2E-120 T 22-04-2016 R615_RS00895 1d166d32bc7829b6166e15670e0eca9c 215 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.1E-56 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS01650 7f35d890c65879a5cccba2381157110c 537 SMART SM00240 27 78 8.9E-7 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 R615_RS01650 7f35d890c65879a5cccba2381157110c 537 SUPERFAMILY SSF49879 28 106 8.23E-20 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 R615_RS01650 7f35d890c65879a5cccba2381157110c 537 Pfam PF00498 FHA domain 29 96 3.8E-15 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 R615_RS01650 7f35d890c65879a5cccba2381157110c 537 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 238 525 7.2E-61 T 22-04-2016 IPR017735 Type VI secretion system, FHA domain-containing protein R615_RS01650 7f35d890c65879a5cccba2381157110c 537 Gene3D G3DSA:2.60.200.20 27 108 3.0E-18 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 R615_RS00370 c96ed6c1e745ebad8c66255726093880 100 PANTHER PTHR40942 1 99 3.7E-40 T 22-04-2016 R615_RS00370 c96ed6c1e745ebad8c66255726093880 100 PANTHER PTHR40942:SF2 1 99 3.7E-40 T 22-04-2016 R615_RS00370 c96ed6c1e745ebad8c66255726093880 100 SUPERFAMILY SSF46626 25 96 5.55E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00370 c96ed6c1e745ebad8c66255726093880 100 PRINTS PR00607 Class IE cytochrome C signature 30 41 7.5E-13 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 R615_RS00370 c96ed6c1e745ebad8c66255726093880 100 PRINTS PR00607 Class IE cytochrome C signature 84 95 7.5E-13 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 R615_RS00370 c96ed6c1e745ebad8c66255726093880 100 PRINTS PR00607 Class IE cytochrome C signature 69 81 7.5E-13 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 R615_RS00370 c96ed6c1e745ebad8c66255726093880 100 PRINTS PR00607 Class IE cytochrome C signature 41 51 7.5E-13 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 R615_RS00370 c96ed6c1e745ebad8c66255726093880 100 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 24 94 2.8E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00370 c96ed6c1e745ebad8c66255726093880 100 Gene3D G3DSA:1.10.760.10 24 95 3.5E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 SUPERFAMILY SSF52922 534 662 1.83E-40 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 Gene3D G3DSA:3.40.50.970 5 322 3.5E-134 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 Pfam PF02779 Transketolase, pyrimidine binding domain 355 526 2.6E-44 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 SUPERFAMILY SSF52518 5 329 2.14E-122 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 PANTHER PTHR11624:SF1 341 662 0.0 T 22-04-2016 R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 PANTHER PTHR11624:SF1 1 310 0.0 T 22-04-2016 R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 PANTHER PTHR11624 341 662 0.0 T 22-04-2016 IPR033247 Transketolase family R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 PANTHER PTHR11624 1 310 0.0 T 22-04-2016 IPR033247 Transketolase family R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.7E-167 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 Gene3D G3DSA:3.40.50.920 539 662 2.9E-46 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 Gene3D G3DSA:3.40.50.970 328 534 9.1E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 Pfam PF02780 Transketolase, C-terminal domain 543 654 1.9E-11 T 22-04-2016 IPR033248 Transketolase, C-terminal domain R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 SUPERFAMILY SSF52518 349 527 5.15E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 SMART SM00861 355 526 2.1E-63 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain R615_RS14570 d415eb11a4767039fecffc49b393e41b 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 659 1.6E-303 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 R615_RS07655 95908382ee53a53050f143de3fab1953 162 Pfam PF13511 Domain of unknown function (DUF4124) 8 46 8.1E-6 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 R615_RS04480 28026fd7168cb40e1acf489e5fcf9b7f 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 24.772 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 R615_RS04480 28026fd7168cb40e1acf489e5fcf9b7f 106 PANTHER PTHR34068:SF3 1 106 5.7E-43 T 22-04-2016 R615_RS04480 28026fd7168cb40e1acf489e5fcf9b7f 106 PANTHER PTHR34068 1 106 5.7E-43 T 22-04-2016 R615_RS04480 28026fd7168cb40e1acf489e5fcf9b7f 106 Gene3D G3DSA:3.30.110.70 1 102 4.5E-36 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 R615_RS04480 28026fd7168cb40e1acf489e5fcf9b7f 106 Pfam PF01906 Putative heavy-metal-binding 1 102 1.4E-37 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 R615_RS04480 28026fd7168cb40e1acf489e5fcf9b7f 106 SUPERFAMILY SSF117782 1 105 8.63E-36 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 R615_RS03835 bba928e386089ed923b020bf4c929670 636 Gene3D G3DSA:3.30.30.30 53 105 3.1E-28 T 22-04-2016 R615_RS03835 bba928e386089ed923b020bf4c929670 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site R615_RS03835 bba928e386089ed923b020bf4c929670 636 Gene3D G3DSA:3.30.420.40 118 191 6.0E-65 T 22-04-2016 R615_RS03835 bba928e386089ed923b020bf4c929670 636 Gene3D G3DSA:3.30.420.40 4 52 6.0E-65 T 22-04-2016 R615_RS03835 bba928e386089ed923b020bf4c929670 636 Gene3D G3DSA:3.30.420.40 192 228 1.4E-33 T 22-04-2016 R615_RS03835 bba928e386089ed923b020bf4c929670 636 Gene3D G3DSA:3.30.420.40 318 360 1.4E-33 T 22-04-2016 R615_RS03835 bba928e386089ed923b020bf4c929670 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site R615_RS03835 bba928e386089ed923b020bf4c929670 636 PANTHER PTHR19375 2 636 0.0 T 22-04-2016 R615_RS03835 bba928e386089ed923b020bf4c929670 636 Gene3D G3DSA:1.20.1270.10 531 602 8.8E-26 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain R615_RS03835 bba928e386089ed923b020bf4c929670 636 SUPERFAMILY SSF53067 1 182 3.4E-67 T 22-04-2016 R615_RS03835 bba928e386089ed923b020bf4c929670 636 PANTHER PTHR19375:SF173 2 636 0.0 T 22-04-2016 R615_RS03835 bba928e386089ed923b020bf4c929670 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 3.1E-287 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 R615_RS03835 bba928e386089ed923b020bf4c929670 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site R615_RS03835 bba928e386089ed923b020bf4c929670 636 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family R615_RS03835 bba928e386089ed923b020bf4c929670 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family R615_RS03835 bba928e386089ed923b020bf4c929670 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family R615_RS03835 bba928e386089ed923b020bf4c929670 636 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family R615_RS03835 bba928e386089ed923b020bf4c929670 636 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family R615_RS03835 bba928e386089ed923b020bf4c929670 636 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family R615_RS03835 bba928e386089ed923b020bf4c929670 636 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family R615_RS03835 bba928e386089ed923b020bf4c929670 636 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family R615_RS03835 bba928e386089ed923b020bf4c929670 636 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.9E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family R615_RS03835 bba928e386089ed923b020bf4c929670 636 SUPERFAMILY SSF100920 383 539 7.32E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain R615_RS03835 bba928e386089ed923b020bf4c929670 636 Gene3D G3DSA:3.90.640.10 229 314 4.3E-29 T 22-04-2016 R615_RS03835 bba928e386089ed923b020bf4c929670 636 SUPERFAMILY SSF53067 186 381 1.77E-66 T 22-04-2016 R615_RS03835 bba928e386089ed923b020bf4c929670 636 Gene3D G3DSA:2.60.34.10 389 530 5.0E-68 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain R615_RS03835 bba928e386089ed923b020bf4c929670 636 SUPERFAMILY SSF100934 506 609 6.67E-19 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain R615_RS03835 bba928e386089ed923b020bf4c929670 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 633 36.563 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 R615_RS03835 bba928e386089ed923b020bf4c929670 636 Pfam PF00012 Hsp70 protein 4 602 4.7E-263 T 22-04-2016 IPR013126 Heat shock protein 70 family R615_RS05010 cf51c7270891574a757f8457f24a8260 793 Pfam PF13426 PAS domain 294 394 0.018 T 22-04-2016 IPR000014 PAS domain R615_RS05010 cf51c7270891574a757f8457f24a8260 793 Pfam PF13426 PAS domain 162 264 0.039 T 22-04-2016 IPR000014 PAS domain R615_RS05010 cf51c7270891574a757f8457f24a8260 793 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 142 1.3E-15 T 22-04-2016 IPR000014 PAS domain R615_RS05010 cf51c7270891574a757f8457f24a8260 793 Gene3D G3DSA:1.10.287.950 508 712 3.4E-63 T 22-04-2016 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 620 649 6.9E-51 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 591 618 6.9E-51 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 514 543 6.9E-51 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 668 697 6.9E-51 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 Gene3D G3DSA:3.30.450.20 161 263 4.7E-4 T 22-04-2016 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 552 738 6.4E-63 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 Gene3D G3DSA:3.30.450.20 33 136 2.2E-23 T 22-04-2016 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 Pfam PF08447 PAS fold 46 131 6.9E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 SUPERFAMILY SSF55785 33 139 2.62E-25 T 22-04-2016 IPR000014 PAS domain R615_RS05010 cf51c7270891574a757f8457f24a8260 793 SMART SM00283 493 740 3.0E-94 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 PANTHER PTHR32089:SF63 98 743 1.9E-166 T 22-04-2016 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 PANTHER PTHR32089 98 743 1.9E-166 T 22-04-2016 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 SMART SM00091 149 214 5.3 T 22-04-2016 IPR000014 PAS domain R615_RS05010 cf51c7270891574a757f8457f24a8260 793 SMART SM00091 21 91 4.8 T 22-04-2016 IPR000014 PAS domain R615_RS05010 cf51c7270891574a757f8457f24a8260 793 SMART SM00091 280 341 290.0 T 22-04-2016 IPR000014 PAS domain R615_RS05010 cf51c7270891574a757f8457f24a8260 793 SUPERFAMILY SSF58104 460 741 9.94E-74 T 22-04-2016 R615_RS05010 cf51c7270891574a757f8457f24a8260 793 SMART SM00086 96 138 5.0E-5 T 22-04-2016 IPR001610 PAC motif R615_RS06470 c00b4347466cf5a72290a00517dc7a21 412 Gene3D G3DSA:3.40.50.2000 173 360 9.9E-7 T 22-04-2016 R615_RS06470 c00b4347466cf5a72290a00517dc7a21 412 Pfam PF13439 Glycosyltransferase Family 4 15 186 1.1E-19 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain R615_RS06470 c00b4347466cf5a72290a00517dc7a21 412 SUPERFAMILY SSF53756 6 386 1.48E-55 T 22-04-2016 R615_RS06470 c00b4347466cf5a72290a00517dc7a21 412 Pfam PF13692 Glycosyl transferases group 1 212 353 1.4E-14 T 22-04-2016 R615_RS06470 c00b4347466cf5a72290a00517dc7a21 412 PANTHER PTHR12526 12 409 2.9E-32 T 22-04-2016 R615_RS04735 ca1542f9430a242a59a738c0d4305bac 374 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 357 56.074 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 R615_RS04735 ca1542f9430a242a59a738c0d4305bac 374 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 354 8.7E-179 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 R615_RS04735 ca1542f9430a242a59a738c0d4305bac 374 PANTHER PTHR10366:SF32 311 374 1.3E-214 T 22-04-2016 R615_RS04735 ca1542f9430a242a59a738c0d4305bac 374 PANTHER PTHR10366:SF32 5 283 1.3E-214 T 22-04-2016 R615_RS04735 ca1542f9430a242a59a738c0d4305bac 374 SUPERFAMILY SSF51735 4 353 4.28E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04735 ca1542f9430a242a59a738c0d4305bac 374 Gene3D G3DSA:3.40.50.720 5 206 6.2E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04735 ca1542f9430a242a59a738c0d4305bac 374 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 347 1.1E-159 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04735 ca1542f9430a242a59a738c0d4305bac 374 PANTHER PTHR10366 311 374 1.3E-214 T 22-04-2016 R615_RS04735 ca1542f9430a242a59a738c0d4305bac 374 PANTHER PTHR10366 5 283 1.3E-214 T 22-04-2016 R615_RS04735 ca1542f9430a242a59a738c0d4305bac 374 Gene3D G3DSA:3.90.25.10 207 248 3.0E-52 T 22-04-2016 R615_RS04735 ca1542f9430a242a59a738c0d4305bac 374 Gene3D G3DSA:3.90.25.10 305 364 3.0E-52 T 22-04-2016 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 7.0E-52 T 22-04-2016 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 TIGRFAM TIGR01393 lepA: elongation factor 4 6 598 1.9E-291 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 298.615 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site R615_RS12525 6a2b7113f56063596b87db755e936e60 599 PANTHER PTHR23115:SF175 400 598 2.3E-273 T 22-04-2016 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 PANTHER PTHR23115:SF175 5 376 2.3E-273 T 22-04-2016 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 SUPERFAMILY SSF52540 5 208 2.93E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12525 6a2b7113f56063596b87db755e936e60 599 SUPERFAMILY SSF54980 403 496 2.59E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain R615_RS12525 6a2b7113f56063596b87db755e936e60 599 Gene3D G3DSA:3.40.50.300 4 196 5.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12525 6a2b7113f56063596b87db755e936e60 599 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 2.7E-48 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal R615_RS12525 6a2b7113f56063596b87db755e936e60 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 175 1.0E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 PANTHER PTHR23115 400 598 2.3E-273 T 22-04-2016 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 PANTHER PTHR23115 5 376 2.3E-273 T 22-04-2016 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 Gene3D G3DSA:3.30.70.870 294 372 1.4E-25 T 22-04-2016 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 Gene3D G3DSA:2.40.30.10 197 292 1.1E-19 T 22-04-2016 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 SMART SM00838 404 489 0.0028 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain R615_RS12525 6a2b7113f56063596b87db755e936e60 599 Pfam PF03144 Elongation factor Tu domain 2 208 277 3.8E-7 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 Pfam PF00679 Elongation factor G C-terminus 402 487 3.0E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain R615_RS12525 6a2b7113f56063596b87db755e936e60 599 SUPERFAMILY SSF50447 169 291 1.24E-26 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS12525 6a2b7113f56063596b87db755e936e60 599 Gene3D G3DSA:3.30.70.240 404 492 5.4E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain R615_RS12525 6a2b7113f56063596b87db755e936e60 599 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 PRINTS PR00315 GTP-binding elongation factor signature 52 60 1.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 PRINTS PR00315 GTP-binding elongation factor signature 129 138 1.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS12525 6a2b7113f56063596b87db755e936e60 599 SUPERFAMILY SSF54980 295 373 3.09E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 PANTHER PTHR31637:SF0 1 514 6.0E-262 T 22-04-2016 R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 Gene3D G3DSA:3.40.1450.10 80 309 6.0E-89 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 PIRSF PIRSF001492 1 512 4.4E-200 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 PANTHER PTHR31637 1 514 6.0E-262 T 22-04-2016 R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 Pfam PF01676 Metalloenzyme superfamily 8 498 8.5E-75 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 SUPERFAMILY SSF64158 79 309 3.53E-78 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 7 510 9.2E-217 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 511 48.504 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 298 1.4E-76 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 SUPERFAMILY SSF53649 8 79 1.44E-68 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 SUPERFAMILY SSF53649 310 510 1.44E-68 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 Gene3D G3DSA:3.40.720.10 314 510 1.5E-79 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 R615_RS02680 350e212d142187ea3c54cd33185d55f2 514 Gene3D G3DSA:3.40.720.10 9 79 1.5E-79 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 R615_RS00680 14d1f8ac964e87211e0e3c099f562fdf 238 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS00680 14d1f8ac964e87211e0e3c099f562fdf 238 PANTHER PTHR24220 5 218 1.8E-114 T 22-04-2016 R615_RS00680 14d1f8ac964e87211e0e3c099f562fdf 238 PANTHER PTHR24220:SF470 5 218 1.8E-114 T 22-04-2016 R615_RS00680 14d1f8ac964e87211e0e3c099f562fdf 238 Pfam PF00005 ABC transporter 20 167 7.2E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS00680 14d1f8ac964e87211e0e3c099f562fdf 238 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 3 216 3.5E-85 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 R615_RS00680 14d1f8ac964e87211e0e3c099f562fdf 238 Gene3D G3DSA:3.40.50.300 2 220 7.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00680 14d1f8ac964e87211e0e3c099f562fdf 238 SUPERFAMILY SSF52540 3 219 5.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00680 14d1f8ac964e87211e0e3c099f562fdf 238 SMART SM00382 29 216 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS00975 9b060d4498977f1394d20e07b694c123 532 Pfam PF05199 GMC oxidoreductase 395 519 7.5E-21 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 R615_RS00975 9b060d4498977f1394d20e07b694c123 532 PANTHER PTHR11552 9 530 3.9E-146 T 22-04-2016 R615_RS00975 9b060d4498977f1394d20e07b694c123 532 PANTHER PTHR11552:SF92 9 530 3.9E-146 T 22-04-2016 R615_RS00975 9b060d4498977f1394d20e07b694c123 532 Pfam PF00732 GMC oxidoreductase 34 298 4.6E-48 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 R615_RS00975 9b060d4498977f1394d20e07b694c123 532 Gene3D G3DSA:3.50.50.60 459 527 1.0E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00975 9b060d4498977f1394d20e07b694c123 532 Gene3D G3DSA:3.50.50.60 195 298 1.0E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00975 9b060d4498977f1394d20e07b694c123 532 Gene3D G3DSA:3.50.50.60 400 413 1.0E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00975 9b060d4498977f1394d20e07b694c123 532 Gene3D G3DSA:3.50.50.60 32 150 1.0E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00975 9b060d4498977f1394d20e07b694c123 532 SUPERFAMILY SSF51905 465 527 7.03E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00975 9b060d4498977f1394d20e07b694c123 532 SUPERFAMILY SSF51905 32 296 7.03E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS04235 95094c15bb04197dc9effb7ff6db7907 782 Pfam PF00580 UvrD/REP helicase N-terminal domain 16 281 2.4E-34 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 R615_RS04235 95094c15bb04197dc9effb7ff6db7907 782 Pfam PF13361 UvrD-like helicase C-terminal domain 336 625 1.1E-22 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 R615_RS04235 95094c15bb04197dc9effb7ff6db7907 782 PANTHER PTHR11070 1 650 1.8E-79 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 R615_RS04235 95094c15bb04197dc9effb7ff6db7907 782 Gene3D G3DSA:3.40.50.300 15 154 2.0E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04235 95094c15bb04197dc9effb7ff6db7907 782 Gene3D G3DSA:3.40.50.300 188 284 2.0E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04235 95094c15bb04197dc9effb7ff6db7907 782 Gene3D G3DSA:3.40.50.300 298 405 1.4E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04235 95094c15bb04197dc9effb7ff6db7907 782 Gene3D G3DSA:3.40.50.300 563 652 1.4E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04235 95094c15bb04197dc9effb7ff6db7907 782 SUPERFAMILY SSF52540 13 634 2.23E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04235 95094c15bb04197dc9effb7ff6db7907 782 Gene3D G3DSA:1.10.486.10 424 547 2.4E-8 T 22-04-2016 R615_RS10255 67d810d524dcd1a49c0052974ad39b9e 742 Gene3D G3DSA:3.10.105.10 410 655 6.5E-47 T 22-04-2016 R615_RS10255 67d810d524dcd1a49c0052974ad39b9e 742 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 174 598 1.8E-53 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain R615_RS10255 67d810d524dcd1a49c0052974ad39b9e 742 SUPERFAMILY SSF53850 45 135 1.05E-84 T 22-04-2016 R615_RS10255 67d810d524dcd1a49c0052974ad39b9e 742 SUPERFAMILY SSF53850 237 697 1.05E-84 T 22-04-2016 R615_RS10255 67d810d524dcd1a49c0052974ad39b9e 742 SUPERFAMILY SSF53850 171 204 1.05E-84 T 22-04-2016 R615_RS10255 67d810d524dcd1a49c0052974ad39b9e 742 PANTHER PTHR30290 14 100 2.7E-64 T 22-04-2016 R615_RS10255 67d810d524dcd1a49c0052974ad39b9e 742 PANTHER PTHR30290 343 696 2.7E-64 T 22-04-2016 R615_RS10255 67d810d524dcd1a49c0052974ad39b9e 742 PANTHER PTHR30290 172 215 2.7E-64 T 22-04-2016 R615_RS10255 67d810d524dcd1a49c0052974ad39b9e 742 PANTHER PTHR30290 122 136 2.7E-64 T 22-04-2016 R615_RS10255 67d810d524dcd1a49c0052974ad39b9e 742 PANTHER PTHR30290 236 321 2.7E-64 T 22-04-2016 R615_RS10255 67d810d524dcd1a49c0052974ad39b9e 742 Gene3D G3DSA:3.90.76.10 55 302 2.1E-22 T 22-04-2016 R615_RS06675 ca55092dfeef51c2a87b9cf38644e890 404 PANTHER PTHR30572 1 401 9.9E-55 T 22-04-2016 R615_RS06675 ca55092dfeef51c2a87b9cf38644e890 404 Pfam PF12704 MacB-like periplasmic core domain 22 240 3.3E-24 T 22-04-2016 IPR025857 MacB-like periplasmic core domain R615_RS06675 ca55092dfeef51c2a87b9cf38644e890 404 Pfam PF02687 FtsX-like permease family 281 392 2.1E-21 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 R615_RS17190 929f512bcc8cff2d26f9a01b097509a7 124 Gene3D G3DSA:1.10.287.110 2 60 6.4E-19 T 22-04-2016 IPR001623 DnaJ domain R615_RS17190 929f512bcc8cff2d26f9a01b097509a7 124 Pfam PF00226 DnaJ domain 5 61 5.9E-17 T 22-04-2016 IPR001623 DnaJ domain R615_RS17190 929f512bcc8cff2d26f9a01b097509a7 124 PRINTS PR00625 DnaJ domain signature 6 24 1.2E-11 T 22-04-2016 IPR001623 DnaJ domain R615_RS17190 929f512bcc8cff2d26f9a01b097509a7 124 PRINTS PR00625 DnaJ domain signature 24 39 1.2E-11 T 22-04-2016 IPR001623 DnaJ domain R615_RS17190 929f512bcc8cff2d26f9a01b097509a7 124 PRINTS PR00625 DnaJ domain signature 42 62 1.2E-11 T 22-04-2016 IPR001623 DnaJ domain R615_RS17190 929f512bcc8cff2d26f9a01b097509a7 124 SMART SM00271 3 62 5.0E-18 T 22-04-2016 IPR001623 DnaJ domain R615_RS17190 929f512bcc8cff2d26f9a01b097509a7 124 PANTHER PTHR24078 5 59 5.2E-15 T 22-04-2016 R615_RS17190 929f512bcc8cff2d26f9a01b097509a7 124 SUPERFAMILY SSF46565 2 63 1.05E-16 T 22-04-2016 IPR001623 DnaJ domain R615_RS08665 808897890f1527e632eb01b662c18354 549 Gene3D G3DSA:3.40.120.10 227 310 4.8E-42 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS08665 808897890f1527e632eb01b662c18354 549 Gene3D G3DSA:3.40.120.10 311 445 4.1E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS08665 808897890f1527e632eb01b662c18354 549 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 211 316 2.4E-14 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS08665 808897890f1527e632eb01b662c18354 549 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 141 150 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS08665 808897890f1527e632eb01b662c18354 549 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 478 537 6.5E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS08665 808897890f1527e632eb01b662c18354 549 Gene3D G3DSA:3.30.310.50 468 545 2.5E-29 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS08665 808897890f1527e632eb01b662c18354 549 PANTHER PTHR22573 18 545 7.0E-264 T 22-04-2016 R615_RS08665 808897890f1527e632eb01b662c18354 549 PANTHER PTHR22573:SF52 18 545 7.0E-264 T 22-04-2016 R615_RS08665 808897890f1527e632eb01b662c18354 549 SUPERFAMILY SSF55957 435 546 1.46E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS08665 808897890f1527e632eb01b662c18354 549 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 323 439 1.8E-28 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS08665 808897890f1527e632eb01b662c18354 549 Gene3D G3DSA:3.40.120.10 31 226 4.1E-59 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS08665 808897890f1527e632eb01b662c18354 549 SUPERFAMILY SSF53738 307 445 2.98E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS08665 808897890f1527e632eb01b662c18354 549 SUPERFAMILY SSF53738 25 236 1.81E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS08665 808897890f1527e632eb01b662c18354 549 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 545 3.7E-276 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 R615_RS08665 808897890f1527e632eb01b662c18354 549 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 181 9.0E-36 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS08665 808897890f1527e632eb01b662c18354 549 SUPERFAMILY SSF53738 210 316 7.65E-9 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 SUPERFAMILY SSF51905 1 185 1.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 SUPERFAMILY SSF51905 286 401 1.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 PANTHER PTHR13789 1 404 3.3E-117 T 22-04-2016 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 PANTHER PTHR13789:SF5 1 404 3.3E-117 T 22-04-2016 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 304 317 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 Gene3D G3DSA:3.50.50.60 1 190 7.8E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 Gene3D G3DSA:3.50.50.60 278 367 7.8E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 321 1.8E-15 T 22-04-2016 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.8E-15 T 22-04-2016 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 305 1.8E-15 T 22-04-2016 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 164 179 1.8E-15 T 22-04-2016 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 400 8.9E-126 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 R615_RS16570 09cb8af34edbf24b67783c18c632525b 404 Pfam PF01494 FAD binding domain 3 350 1.7E-23 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 R615_RS14280 812deea9256d0822b8cc5ac53a97f3fe 345 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 316 4.7E-59 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 R615_RS14280 812deea9256d0822b8cc5ac53a97f3fe 345 SUPERFAMILY SSF48179 176 315 4.42E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS14280 812deea9256d0822b8cc5ac53a97f3fe 345 Gene3D G3DSA:1.10.1040.10 183 316 1.8E-29 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS14280 812deea9256d0822b8cc5ac53a97f3fe 345 SUPERFAMILY SSF51735 1 123 4.45E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS14280 812deea9256d0822b8cc5ac53a97f3fe 345 PANTHER PTHR21708 1 315 1.0E-69 T 22-04-2016 R615_RS14280 812deea9256d0822b8cc5ac53a97f3fe 345 PANTHER PTHR21708:SF27 1 315 1.0E-69 T 22-04-2016 R615_RS14280 812deea9256d0822b8cc5ac53a97f3fe 345 Gene3D G3DSA:3.40.50.720 1 182 9.1E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS14280 812deea9256d0822b8cc5ac53a97f3fe 345 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 176 315 8.9E-23 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 R615_RS14280 812deea9256d0822b8cc5ac53a97f3fe 345 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 151 2.6E-30 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 R615_RS07455 cf457f86ea000ee02d9a5d82818756a9 300 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 272 9.6E-101 T 22-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis R615_RS07455 cf457f86ea000ee02d9a5d82818756a9 300 PANTHER PTHR11089 2 286 1.1E-77 T 22-04-2016 R615_RS07455 cf457f86ea000ee02d9a5d82818756a9 300 PIRSF PIRSF006230 1 277 6.8E-96 T 22-04-2016 IPR016478 GTPase, MTG1 R615_RS07455 cf457f86ea000ee02d9a5d82818756a9 300 Pfam PF01926 50S ribosome-binding GTPase 116 176 5.5E-15 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS07455 cf457f86ea000ee02d9a5d82818756a9 300 Gene3D G3DSA:3.40.50.300 16 171 1.8E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07455 cf457f86ea000ee02d9a5d82818756a9 300 Gene3D G3DSA:1.10.1580.10 174 266 2.1E-27 T 22-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain R615_RS07455 cf457f86ea000ee02d9a5d82818756a9 300 SUPERFAMILY SSF52540 9 182 1.33E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 SUPERFAMILY SSF55073 410 561 3.14E-41 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 PANTHER PTHR10799 438 655 3.5E-59 T 22-04-2016 R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 PANTHER PTHR10799 711 730 3.5E-59 T 22-04-2016 R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 PANTHER PTHR10799 1 342 3.5E-59 T 22-04-2016 R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 SUPERFAMILY SSF141868 581 823 9.68E-78 T 22-04-2016 IPR001633 EAL domain R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 SMART SM00267 394 565 1.7E-53 T 22-04-2016 IPR000160 GGDEF domain R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 PANTHER PTHR10799:SF774 438 655 3.5E-59 T 22-04-2016 R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 PANTHER PTHR10799:SF774 711 730 3.5E-59 T 22-04-2016 R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 PANTHER PTHR10799:SF774 1 342 3.5E-59 T 22-04-2016 R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 Pfam PF00563 EAL domain 581 812 2.4E-66 T 22-04-2016 IPR001633 EAL domain R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 Gene3D G3DSA:3.20.20.450 578 822 2.3E-83 T 22-04-2016 IPR001633 EAL domain R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 Gene3D G3DSA:3.30.70.270 406 568 8.3E-48 T 22-04-2016 R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 SMART SM00052 575 817 3.2E-96 T 22-04-2016 IPR001633 EAL domain R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 Pfam PF00990 Diguanylate cyclase, GGDEF domain 405 558 2.3E-42 T 22-04-2016 IPR000160 GGDEF domain R615_RS17655 61e6b5f964c65d5fc4f21679a0a4edd8 842 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 401 562 2.3E-36 T 22-04-2016 IPR000160 GGDEF domain R615_RS03825 89e360777d8a08d40aaaa59c55470936 557 PIRSF PIRSF003128 1 557 5.6E-164 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 R615_RS03825 89e360777d8a08d40aaaa59c55470936 557 Gene3D G3DSA:3.40.50.300 432 502 3.8E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03825 89e360777d8a08d40aaaa59c55470936 557 SUPERFAMILY SSF52540 1 215 4.89E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03825 89e360777d8a08d40aaaa59c55470936 557 SUPERFAMILY SSF52540 284 505 2.66E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03825 89e360777d8a08d40aaaa59c55470936 557 SUPERFAMILY SSF52540 4 50 2.66E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03825 89e360777d8a08d40aaaa59c55470936 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 511 2.4E-21 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal R615_RS03825 89e360777d8a08d40aaaa59c55470936 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 2.1E-167 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 R615_RS03825 89e360777d8a08d40aaaa59c55470936 557 PANTHER PTHR11059 2 556 2.1E-161 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 R615_RS03825 89e360777d8a08d40aaaa59c55470936 557 Gene3D G3DSA:3.40.50.300 1 201 4.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10120 9987b733034a0bcd22a953dbfbf3b005 203 Gene3D G3DSA:1.10.530.10 86 195 9.7E-29 T 22-04-2016 R615_RS10120 9987b733034a0bcd22a953dbfbf3b005 203 PANTHER PTHR21666 70 184 2.1E-19 T 22-04-2016 R615_RS10120 9987b733034a0bcd22a953dbfbf3b005 203 SUPERFAMILY SSF53955 77 196 4.38E-33 T 22-04-2016 IPR023346 Lysozyme-like domain R615_RS10120 9987b733034a0bcd22a953dbfbf3b005 203 Pfam PF01464 Transglycosylase SLT domain 90 186 6.0E-19 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 R615_RS13975 6f69fca6d5f39ff1222816b01a3093c8 453 Pfam PF14793 Domain of unknown function (DUF4478) 8 112 1.5E-38 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 R615_RS13975 6f69fca6d5f39ff1222816b01a3093c8 453 Gene3D G3DSA:3.40.50.450 125 450 1.4E-106 T 22-04-2016 R615_RS13975 6f69fca6d5f39ff1222816b01a3093c8 453 SUPERFAMILY SSF102405 118 328 4.58E-39 T 22-04-2016 R615_RS13975 6f69fca6d5f39ff1222816b01a3093c8 453 Pfam PF11892 Domain of unknown function (DUF3412) 332 451 3.1E-49 T 22-04-2016 IPR021826 Protein of unknown function DUF3412 R615_RS13975 6f69fca6d5f39ff1222816b01a3093c8 453 Pfam PF03641 Possible lysine decarboxylase 189 328 1.2E-27 T 22-04-2016 IPR031100 LOG family R615_RS13975 6f69fca6d5f39ff1222816b01a3093c8 453 PANTHER PTHR31223:SF12 358 383 1.9E-152 T 22-04-2016 R615_RS13975 6f69fca6d5f39ff1222816b01a3093c8 453 PANTHER PTHR31223:SF12 85 341 1.9E-152 T 22-04-2016 R615_RS13975 6f69fca6d5f39ff1222816b01a3093c8 453 Gene3D G3DSA:3.30.1850.10 7 113 4.5E-37 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 R615_RS13975 6f69fca6d5f39ff1222816b01a3093c8 453 PANTHER PTHR31223 358 383 1.9E-152 T 22-04-2016 R615_RS13975 6f69fca6d5f39ff1222816b01a3093c8 453 PANTHER PTHR31223 85 341 1.9E-152 T 22-04-2016 R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 SUPERFAMILY SSF46977 419 519 2.09E-30 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 Gene3D G3DSA:3.90.700.10 237 341 1.6E-39 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 PANTHER PTHR11632:SF27 6 531 4.7E-255 T 22-04-2016 R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 SUPERFAMILY SSF56425 231 346 5.08E-43 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 Gene3D G3DSA:1.20.58.100 409 514 2.1E-32 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 513 1.1E-199 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 434 514 1.7E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 SUPERFAMILY SSF51905 3 248 1.45E-68 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 SUPERFAMILY SSF51905 349 441 1.45E-68 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 PIRSF PIRSF000171 2 534 1.8E-31 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 PANTHER PTHR11632 6 531 4.7E-255 T 22-04-2016 R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.2E-5 T 22-04-2016 R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 1.2E-5 T 22-04-2016 R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 Pfam PF00890 FAD binding domain 8 385 4.7E-100 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 Gene3D G3DSA:3.50.50.60 342 403 6.1E-100 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12555 096362d91dfbaff704a19bafdf7aca61 535 Gene3D G3DSA:3.50.50.60 4 236 6.1E-100 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS02140 037c9c83fec0b3fc911b3e275b42efed 216 PANTHER PTHR21403 1 215 1.0E-85 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 R615_RS02140 037c9c83fec0b3fc911b3e275b42efed 216 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 144 165 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 R615_RS02140 037c9c83fec0b3fc911b3e275b42efed 216 PANTHER PTHR21403:SF3 1 215 1.0E-85 T 22-04-2016 R615_RS02140 037c9c83fec0b3fc911b3e275b42efed 216 SUPERFAMILY SSF53850 2 208 3.04E-65 T 22-04-2016 R615_RS02140 037c9c83fec0b3fc911b3e275b42efed 216 Pfam PF01634 ATP phosphoribosyltransferase 54 204 1.5E-47 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 R615_RS02140 037c9c83fec0b3fc911b3e275b42efed 216 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 185 3.9E-55 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 R615_RS02140 037c9c83fec0b3fc911b3e275b42efed 216 Gene3D G3DSA:3.40.190.10 5 118 8.8E-34 T 22-04-2016 R615_RS02140 037c9c83fec0b3fc911b3e275b42efed 216 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 209 52.212 T 22-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 R615_RS02140 037c9c83fec0b3fc911b3e275b42efed 216 Gene3D G3DSA:3.40.190.10 119 176 8.4E-28 T 22-04-2016 R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 Pfam PF13538 UvrD-like helicase C-terminal domain 571 612 2.9E-14 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 24 642 2.0E-150 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 Gene3D G3DSA:3.40.50.300 559 630 1.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 Gene3D G3DSA:3.40.50.300 453 499 1.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 Gene3D G3DSA:3.40.50.300 387 413 1.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 SUPERFAMILY SSF52540 380 411 1.42E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 SUPERFAMILY SSF52540 314 353 1.42E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 SUPERFAMILY SSF52540 469 643 1.42E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 PANTHER PTHR10887:SF284 141 496 1.2E-65 T 22-04-2016 R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 PANTHER PTHR10887:SF284 571 612 1.2E-65 T 22-04-2016 R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 PANTHER PTHR10887 141 496 1.2E-65 T 22-04-2016 R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 PANTHER PTHR10887 571 612 1.2E-65 T 22-04-2016 R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 SUPERFAMILY SSF52540 59 393 1.52E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 Pfam PF13604 AAA domain 194 361 4.0E-32 T 22-04-2016 R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 29 642 49.007 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 R615_RS09890 196c953ecdab72de83ffb0dd098ff193 645 Gene3D G3DSA:3.40.50.300 198 347 2.1E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14290 ddd8eef860634f5760ee934e8fac5abc 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 302 1.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS14290 ddd8eef860634f5760ee934e8fac5abc 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 286 1.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS14290 ddd8eef860634f5760ee934e8fac5abc 304 PANTHER PTHR11019:SF52 205 304 1.5E-26 T 22-04-2016 R615_RS14290 ddd8eef860634f5760ee934e8fac5abc 304 SUPERFAMILY SSF46689 255 304 3.05E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS14290 ddd8eef860634f5760ee934e8fac5abc 304 SMART SM00342 219 302 4.1E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS14290 ddd8eef860634f5760ee934e8fac5abc 304 Pfam PF12833 Helix-turn-helix domain 227 304 7.8E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS14290 ddd8eef860634f5760ee934e8fac5abc 304 PANTHER PTHR11019 205 304 1.5E-26 T 22-04-2016 R615_RS14290 ddd8eef860634f5760ee934e8fac5abc 304 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 15 173 2.5E-23 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS14290 ddd8eef860634f5760ee934e8fac5abc 304 Gene3D G3DSA:1.10.10.60 255 304 8.6E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Gene3D G3DSA:3.30.1490.20 687 744 4.4E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 SUPERFAMILY SSF52440 1 127 4.75E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Gene3D G3DSA:3.30.1490.20 141 199 1.4E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 SUPERFAMILY SSF48108 396 554 1.02E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Gene3D G3DSA:3.30.470.20 200 399 1.7E-75 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Gene3D G3DSA:3.30.470.20 745 934 3.1E-77 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Gene3D G3DSA:3.40.50.1380 937 1071 1.9E-45 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 SUPERFAMILY SSF52440 556 675 4.03E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 SUPERFAMILY SSF52335 937 1070 1.03E-40 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 SUPERFAMILY SSF56059 128 401 3.01E-110 T 22-04-2016 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.171 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Pfam PF02142 MGS-like domain 955 1041 1.6E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 SMART SM00851 955 1041 1.0E-34 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 PANTHER PTHR11405:SF5 1 1070 0.0 T 22-04-2016 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Gene3D G3DSA:3.40.50.20 539 662 4.9E-61 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 PANTHER PTHR11405 1 1070 0.0 T 22-04-2016 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Gene3D G3DSA:1.10.1030.10 400 538 1.2E-50 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.418 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 5.1E-39 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 SUPERFAMILY SSF56059 673 933 1.45E-103 T 22-04-2016 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 SMART SM01096 424 547 8.2E-76 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1051 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.1E-73 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 8.6E-32 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 Gene3D G3DSA:3.40.50.20 3 108 9.3E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS03865 b1a8fae395936e7dce768c2a99608a28 1072 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS01210 f560bbd2f6dc4ae413e32f406176cb34 292 PANTHER PTHR33446:SF2 16 269 2.8E-21 T 22-04-2016 R615_RS01210 f560bbd2f6dc4ae413e32f406176cb34 292 Gene3D G3DSA:3.30.1150.10 177 284 4.7E-20 T 22-04-2016 R615_RS01210 f560bbd2f6dc4ae413e32f406176cb34 292 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 206 268 2.1E-11 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 R615_RS01210 f560bbd2f6dc4ae413e32f406176cb34 292 PANTHER PTHR33446 16 269 2.8E-21 T 22-04-2016 R615_RS01210 f560bbd2f6dc4ae413e32f406176cb34 292 SUPERFAMILY SSF74653 171 284 3.53E-17 T 22-04-2016 R615_RS01210 f560bbd2f6dc4ae413e32f406176cb34 292 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 206 282 1.2E-11 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 PANTHER PTHR10584:SF159 1 338 5.1E-145 T 22-04-2016 R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 Pfam PF01467 Cytidylyltransferase-like 345 435 8.9E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.875 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 Gene3D G3DSA:3.40.1190.20 12 314 2.3E-70 T 22-04-2016 IPR029056 Ribokinase-like R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 3.3E-128 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 473 1.3E-62 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 343 408 4.1E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 Gene3D G3DSA:3.40.50.620 340 460 6.4E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 SUPERFAMILY SSF52374 342 471 1.3E-22 T 22-04-2016 R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 PANTHER PTHR10584 1 338 5.1E-145 T 22-04-2016 R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 SUPERFAMILY SSF53613 11 312 2.03E-61 T 22-04-2016 IPR029056 Ribokinase-like R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 Pfam PF00294 pfkB family carbohydrate kinase 11 302 1.6E-50 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB R615_RS00165 487aa98d42c751c1620dc860c5214ed4 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 50 74 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 R615_RS11500 e789f289485e20dbe8830220c657d053 405 SUPERFAMILY SSF50939 199 383 9.02E-37 T 22-04-2016 IPR011040 Sialidases R615_RS11500 e789f289485e20dbe8830220c657d053 405 SUPERFAMILY SSF50939 58 144 9.02E-37 T 22-04-2016 IPR011040 Sialidases R615_RS11500 e789f289485e20dbe8830220c657d053 405 Gene3D G3DSA:2.130.10.140 206 324 1.1E-15 T 22-04-2016 R615_RS11500 e789f289485e20dbe8830220c657d053 405 Gene3D G3DSA:2.130.10.140 51 164 2.0E-11 T 22-04-2016 R615_RS11500 e789f289485e20dbe8830220c657d053 405 Pfam PF14870 Photosynthesis system II assembly factor YCF48 71 132 3.5E-7 T 22-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain R615_RS11500 e789f289485e20dbe8830220c657d053 405 Pfam PF14870 Photosynthesis system II assembly factor YCF48 196 315 1.8E-11 T 22-04-2016 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain R615_RS03995 52e1f336b431ae6cc30b4cd8d071932d 456 Pfam PF10996 Beta-Casp domain 255 370 1.2E-24 T 22-04-2016 IPR022712 Beta-Casp domain R615_RS03995 52e1f336b431ae6cc30b4cd8d071932d 456 SMART SM00849 17 235 2.2E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS03995 52e1f336b431ae6cc30b4cd8d071932d 456 Pfam PF00753 Metallo-beta-lactamase superfamily 20 200 3.7E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS03995 52e1f336b431ae6cc30b4cd8d071932d 456 SMART SM01027 251 370 4.4E-48 T 22-04-2016 IPR022712 Beta-Casp domain R615_RS03995 52e1f336b431ae6cc30b4cd8d071932d 456 Gene3D G3DSA:3.60.15.10 139 259 4.8E-48 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS03995 52e1f336b431ae6cc30b4cd8d071932d 456 Gene3D G3DSA:3.60.15.10 4 104 4.8E-48 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS03995 52e1f336b431ae6cc30b4cd8d071932d 456 PANTHER PTHR11203 126 448 7.0E-104 T 22-04-2016 R615_RS03995 52e1f336b431ae6cc30b4cd8d071932d 456 PANTHER PTHR11203 1 109 7.0E-104 T 22-04-2016 R615_RS03995 52e1f336b431ae6cc30b4cd8d071932d 456 PANTHER PTHR11203:SF11 126 448 7.0E-104 T 22-04-2016 R615_RS03995 52e1f336b431ae6cc30b4cd8d071932d 456 PANTHER PTHR11203:SF11 1 109 7.0E-104 T 22-04-2016 R615_RS03995 52e1f336b431ae6cc30b4cd8d071932d 456 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 383 447 1.8E-14 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain R615_RS03995 52e1f336b431ae6cc30b4cd8d071932d 456 SUPERFAMILY SSF56281 6 452 3.54E-120 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS04575 3ec1749129793b84e007ce0f788f69b4 390 Gene3D G3DSA:1.10.443.10 212 379 1.4E-25 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 R615_RS04575 3ec1749129793b84e007ce0f788f69b4 390 PANTHER PTHR30629 1 388 4.5E-125 T 22-04-2016 R615_RS04575 3ec1749129793b84e007ce0f788f69b4 390 Gene3D G3DSA:1.10.150.130 100 193 1.8E-17 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal R615_RS04575 3ec1749129793b84e007ce0f788f69b4 390 Pfam PF13356 Domain of unknown function (DUF4102) 4 87 1.1E-17 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 R615_RS04575 3ec1749129793b84e007ce0f788f69b4 390 PANTHER PTHR30629:SF3 1 388 4.5E-125 T 22-04-2016 R615_RS04575 3ec1749129793b84e007ce0f788f69b4 390 SUPERFAMILY SSF56349 101 382 4.41E-60 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 R615_RS04575 3ec1749129793b84e007ce0f788f69b4 390 Pfam PF00589 Phage integrase family 217 372 3.7E-21 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 R615_RS09035 e315594fb4c4c9be4fdb3ac987e329c0 362 PANTHER PTHR11601:SF31 1 357 1.2E-97 T 22-04-2016 R615_RS09035 e315594fb4c4c9be4fdb3ac987e329c0 362 Gene3D G3DSA:3.40.640.10 14 253 2.5E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS09035 e315594fb4c4c9be4fdb3ac987e329c0 362 Pfam PF00266 Aminotransferase class-V 2 327 2.5E-51 T 22-04-2016 IPR000192 Aminotransferase class V domain R615_RS09035 e315594fb4c4c9be4fdb3ac987e329c0 362 SUPERFAMILY SSF53383 1 358 2.99E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS09035 e315594fb4c4c9be4fdb3ac987e329c0 362 PANTHER PTHR11601 1 357 1.2E-97 T 22-04-2016 R615_RS09035 e315594fb4c4c9be4fdb3ac987e329c0 362 Gene3D G3DSA:3.90.1150.10 254 357 1.2E-11 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS06025 f5faab4780116b99e8d0906aa5d79d43 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 151 172 3.1E-19 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 R615_RS06025 f5faab4780116b99e8d0906aa5d79d43 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.1E-19 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 R615_RS06025 f5faab4780116b99e8d0906aa5d79d43 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 205 215 3.1E-19 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 R615_RS06025 f5faab4780116b99e8d0906aa5d79d43 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 68 87 3.1E-19 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 R615_RS06025 f5faab4780116b99e8d0906aa5d79d43 338 SUPERFAMILY SSF52374 5 334 1.34E-78 T 22-04-2016 R615_RS06025 f5faab4780116b99e8d0906aa5d79d43 338 Gene3D G3DSA:3.40.50.620 3 214 1.4E-70 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS06025 f5faab4780116b99e8d0906aa5d79d43 338 Gene3D G3DSA:1.10.240.10 215 301 1.5E-27 T 22-04-2016 R615_RS06025 f5faab4780116b99e8d0906aa5d79d43 338 PANTHER PTHR10055 1 338 7.5E-175 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 R615_RS06025 f5faab4780116b99e8d0906aa5d79d43 338 PANTHER PTHR10055:SF11 1 338 7.5E-175 T 22-04-2016 R615_RS06025 f5faab4780116b99e8d0906aa5d79d43 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 333 7.6E-84 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 R615_RS06025 f5faab4780116b99e8d0906aa5d79d43 338 Pfam PF00579 tRNA synthetases class I (W and Y) 4 286 3.6E-51 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS07425 9de63d44a478a197a6c272f33986001d 189 SUPERFAMILY SSF101874 18 188 2.09E-21 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like R615_RS07425 9de63d44a478a197a6c272f33986001d 189 Gene3D G3DSA:2.40.128.110 18 187 9.6E-14 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like R615_RS07425 9de63d44a478a197a6c272f33986001d 189 Pfam PF04264 YceI-like domain 26 186 5.4E-13 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like R615_RS07425 9de63d44a478a197a6c272f33986001d 189 SMART SM00867 19 187 6.8E-15 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like R615_RS07425 9de63d44a478a197a6c272f33986001d 189 PIRSF PIRSF029811 1 189 4.4E-62 T 22-04-2016 IPR027016 Uncharacterised protein with YceI domain R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 SUPERFAMILY SSF52440 1047 1171 2.11E-33 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 SUPERFAMILY SSF52096 69 275 3.22E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 SUPERFAMILY SSF51230 1543 1630 1.93E-9 T 22-04-2016 IPR011053 Single hybrid motif R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 SUPERFAMILY SSF51246 1388 1507 3.82E-27 T 22-04-2016 IPR011054 Rudiment single hybrid motif R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 Pfam PF00289 Biotin carboxylase, N-terminal domain 1057 1168 5.2E-30 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 1345 1352 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 Gene3D G3DSA:3.90.226.10 782 959 6.4E-18 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 SUPERFAMILY SSF56059 1141 1390 1.63E-56 T 22-04-2016 R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 Gene3D G3DSA:3.30.1490.20 1188 1260 2.5E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 Gene3D G3DSA:2.40.50.100 1541 1630 3.4E-17 T 22-04-2016 R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 Gene3D G3DSA:3.90.226.10 101 270 9.3E-22 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 1174 1380 6.2E-61 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 Pfam PF01039 Carboxyl transferase domain 119 214 3.3E-11 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 Gene3D G3DSA:3.40.50.20 1057 1187 2.6E-34 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 SMART SM00878 1393 1504 1.4E-31 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 Pfam PF02785 Biotin carboxylase C-terminal domain 1393 1504 3.1E-24 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 SUPERFAMILY SSF52096 748 1029 1.6E-27 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 PANTHER PTHR18866 1057 1638 3.7E-179 T 22-04-2016 R615_RS09880 7767b5e4145137b3cea3448105a0a889 1640 Gene3D G3DSA:3.30.470.20 1262 1506 2.5E-71 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 Gene3D G3DSA:2.70.150.10 263 419 5.0E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 13 100 4.3E-24 T 22-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 519 525 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 SUPERFAMILY SSF81665 753 778 9.02E-10 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 SUPERFAMILY SSF81665 283 316 9.02E-10 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 SUPERFAMILY SSF81665 420 511 9.02E-10 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 SUPERFAMILY SSF56784 571 804 6.46E-48 T 22-04-2016 IPR023214 HAD-like domain R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 SUPERFAMILY SSF56784 516 535 6.46E-48 T 22-04-2016 IPR023214 HAD-like domain R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 291 782 6.5E-73 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 SUPERFAMILY SSF55008 99 174 3.8E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 237 806 1.1E-152 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 727 739 2.6E-23 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 369 383 2.6E-23 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 723 2.6E-23 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 651 661 2.6E-23 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 517 531 2.6E-23 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 255 806 3.2E-162 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 Pfam PF00702 haloacid dehalogenase-like hydrolase 515 718 4.0E-31 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 Gene3D G3DSA:3.30.70.100 105 184 3.0E-17 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 PANTHER PTHR24093 104 817 2.8E-178 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 PANTHER PTHR24093:SF50 104 817 2.8E-178 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 Pfam PF00122 E1-E2 ATPase 288 508 1.6E-56 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 Pfam PF00403 Heavy-metal-associated domain 107 168 9.2E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 281 808 1.3E-113 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 SUPERFAMILY SSF81653 329 419 8.5E-23 T 22-04-2016 R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 Gene3D G3DSA:3.40.50.1000 624 772 8.6E-50 T 22-04-2016 IPR023214 HAD-like domain R615_RS07545 1924f3f42bd295543caeddcb360b2cbc 817 Gene3D G3DSA:3.40.50.1000 491 533 8.6E-50 T 22-04-2016 IPR023214 HAD-like domain R615_RS09400 91ee8c0192841c7dea08759bcabbc5f9 108 SUPERFAMILY SSF82607 10 102 7.59E-34 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family R615_RS09400 91ee8c0192841c7dea08759bcabbc5f9 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 5.3E-33 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family R615_RS09400 91ee8c0192841c7dea08759bcabbc5f9 108 PANTHER PTHR33449:SF1 3 108 2.2E-47 T 22-04-2016 R615_RS09400 91ee8c0192841c7dea08759bcabbc5f9 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 23.132 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family R615_RS09400 91ee8c0192841c7dea08759bcabbc5f9 108 Gene3D G3DSA:3.30.1310.10 3 108 1.4E-47 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family R615_RS09400 91ee8c0192841c7dea08759bcabbc5f9 108 PANTHER PTHR33449 3 108 2.2E-47 T 22-04-2016 R615_RS09400 91ee8c0192841c7dea08759bcabbc5f9 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 3.6E-32 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family R615_RS09400 91ee8c0192841c7dea08759bcabbc5f9 108 PIRSF PIRSF004555 3 108 1.6E-36 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family R615_RS12140 5573315133c878b0cc7a283adb0553ee 79 SUPERFAMILY SSF50037 7 77 4.12E-18 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal R615_RS12140 5573315133c878b0cc7a283adb0553ee 79 SMART SM00899 4 77 8.3E-18 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 R615_RS12140 5573315133c878b0cc7a283adb0553ee 79 PANTHER PTHR33238 5 78 1.3E-18 T 22-04-2016 R615_RS12140 5573315133c878b0cc7a283adb0553ee 79 Pfam PF04023 FeoA domain 5 76 2.5E-16 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 R615_RS01415 69affb5c6bd3e6b3d62436458355e55d 579 PRINTS PR00762 Chloride channel signature 362 378 2.4E-20 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 R615_RS01415 69affb5c6bd3e6b3d62436458355e55d 579 PRINTS PR00762 Chloride channel signature 167 186 2.4E-20 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 R615_RS01415 69affb5c6bd3e6b3d62436458355e55d 579 PRINTS PR00762 Chloride channel signature 380 399 2.4E-20 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 R615_RS01415 69affb5c6bd3e6b3d62436458355e55d 579 PRINTS PR00762 Chloride channel signature 116 135 2.4E-20 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 R615_RS01415 69affb5c6bd3e6b3d62436458355e55d 579 PANTHER PTHR11689 1 14 1.9E-66 T 22-04-2016 R615_RS01415 69affb5c6bd3e6b3d62436458355e55d 579 Pfam PF00654 Voltage gated chloride channel 74 411 4.9E-78 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 R615_RS01415 69affb5c6bd3e6b3d62436458355e55d 579 PANTHER PTHR11689:SF14 1 14 1.9E-66 T 22-04-2016 R615_RS01415 69affb5c6bd3e6b3d62436458355e55d 579 Gene3D G3DSA:1.10.3080.10 22 425 5.7E-77 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 R615_RS01415 69affb5c6bd3e6b3d62436458355e55d 579 PANTHER PTHR11689 62 459 1.9E-66 T 22-04-2016 R615_RS01415 69affb5c6bd3e6b3d62436458355e55d 579 SUPERFAMILY SSF81340 6 416 8.5E-88 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 R615_RS01415 69affb5c6bd3e6b3d62436458355e55d 579 PANTHER PTHR11689:SF14 62 459 1.9E-66 T 22-04-2016 R615_RS04015 369212f50aea36b3574895e26eadef6d 245 SUPERFAMILY SSF56281 6 237 1.15E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS04015 369212f50aea36b3574895e26eadef6d 245 PANTHER PTHR32145:SF7 1 240 8.5E-66 T 22-04-2016 R615_RS04015 369212f50aea36b3574895e26eadef6d 245 Gene3D G3DSA:3.60.15.10 6 236 2.4E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS04015 369212f50aea36b3574895e26eadef6d 245 PANTHER PTHR32145 1 240 8.5E-66 T 22-04-2016 R615_RS04015 369212f50aea36b3574895e26eadef6d 245 Pfam PF00753 Metallo-beta-lactamase superfamily 30 218 9.9E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS04015 369212f50aea36b3574895e26eadef6d 245 SMART SM00849 29 218 1.2E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS09710 4adcf29b174726f1c7509d762dbde85c 453 SUPERFAMILY SSF53720 5 452 2.09E-135 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 R615_RS09710 4adcf29b174726f1c7509d762dbde85c 453 PANTHER PTHR11699 6 452 1.0E-192 T 22-04-2016 R615_RS09710 4adcf29b174726f1c7509d762dbde85c 453 Gene3D G3DSA:3.40.605.10 6 240 3.2E-73 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 R615_RS09710 4adcf29b174726f1c7509d762dbde85c 453 Gene3D G3DSA:3.40.309.10 241 426 4.1E-54 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 R615_RS09710 4adcf29b174726f1c7509d762dbde85c 453 PANTHER PTHR11699:SF28 6 452 1.0E-192 T 22-04-2016 R615_RS09710 4adcf29b174726f1c7509d762dbde85c 453 Pfam PF00171 Aldehyde dehydrogenase family 5 450 7.3E-132 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 R615_RS09125 e708d8a12956530c6c97d485e9dbd5d1 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 182 5.3E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS09125 e708d8a12956530c6c97d485e9dbd5d1 221 SUPERFAMILY SSF56784 6 217 9.67E-53 T 22-04-2016 IPR023214 HAD-like domain R615_RS09125 e708d8a12956530c6c97d485e9dbd5d1 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 187 6.6E-34 T 22-04-2016 IPR023214 HAD-like domain R615_RS09125 e708d8a12956530c6c97d485e9dbd5d1 221 PANTHER PTHR18901 8 218 1.6E-53 T 22-04-2016 R615_RS09125 e708d8a12956530c6c97d485e9dbd5d1 221 Gene3D G3DSA:3.40.50.1000 77 218 3.1E-38 T 22-04-2016 IPR023214 HAD-like domain R615_RS09125 e708d8a12956530c6c97d485e9dbd5d1 221 PANTHER PTHR18901:SF40 8 218 1.6E-53 T 22-04-2016 R615_RS09125 e708d8a12956530c6c97d485e9dbd5d1 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 188 1.1E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS09125 e708d8a12956530c6c97d485e9dbd5d1 221 Gene3D G3DSA:1.10.150.240 26 76 2.5E-9 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 R615_RS15865 18ca86772da4bbc8c3c3bbfdbee100b9 98 SUPERFAMILY SSF54189 1 92 1.62E-30 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15865 18ca86772da4bbc8c3c3bbfdbee100b9 98 Gene3D G3DSA:3.30.70.330 5 96 3.0E-33 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 R615_RS15865 18ca86772da4bbc8c3c3bbfdbee100b9 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.367 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 R615_RS15865 18ca86772da4bbc8c3c3bbfdbee100b9 98 PANTHER PTHR11620 7 95 4.5E-29 T 22-04-2016 R615_RS15865 18ca86772da4bbc8c3c3bbfdbee100b9 98 Pfam PF00276 Ribosomal protein L23 8 94 1.0E-30 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 Pfam PF00890 FAD binding domain 10 407 2.1E-118 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 SUPERFAMILY SSF56425 239 358 5.23E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 SUPERFAMILY SSF46977 455 590 1.44E-44 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 PIRSF PIRSF000171 1 581 9.0E-48 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 PANTHER PTHR11632 1 588 0.0 T 22-04-2016 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 Gene3D G3DSA:1.20.58.100 448 556 8.7E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 8 590 1.1E-285 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 44 53 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 10 590 2.1E-244 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 Gene3D G3DSA:3.50.50.60 353 424 4.5E-115 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 Gene3D G3DSA:3.50.50.60 2 245 4.5E-115 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 Gene3D G3DSA:4.10.80.40 557 590 3.1E-20 T 22-04-2016 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 Gene3D G3DSA:3.90.700.10 246 352 1.0E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 SUPERFAMILY SSF51905 4 262 5.19E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 SUPERFAMILY SSF51905 361 426 5.19E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 462 590 1.4E-35 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 R615_RS09800 932c228a8bcf0075c424ce82cc989b6d 590 PANTHER PTHR11632:SF5 1 588 0.0 T 22-04-2016 R615_RS02910 0404bc995a7588425a136f1cb6c68afd 109 Pfam PF00639 PPIC-type PPIASE domain 16 88 1.2E-10 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 R615_RS02910 0404bc995a7588425a136f1cb6c68afd 109 Gene3D G3DSA:3.10.50.40 3 88 8.1E-17 T 22-04-2016 R615_RS02910 0404bc995a7588425a136f1cb6c68afd 109 SUPERFAMILY SSF54534 2 88 2.88E-16 T 22-04-2016 R615_RS10565 6c0271badc9ff8f2cbf8dfcb46a12e24 318 Gene3D G3DSA:1.10.357.10 72 263 5.3E-26 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS10565 6c0271badc9ff8f2cbf8dfcb46a12e24 318 SUPERFAMILY SSF46689 72 144 1.44E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS10565 6c0271badc9ff8f2cbf8dfcb46a12e24 318 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 83 96 6.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS10565 6c0271badc9ff8f2cbf8dfcb46a12e24 318 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 104 127 6.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS10565 6c0271badc9ff8f2cbf8dfcb46a12e24 318 PANTHER PTHR30328 56 275 4.9E-25 T 22-04-2016 R615_RS10565 6c0271badc9ff8f2cbf8dfcb46a12e24 318 Pfam PF00440 Bacterial regulatory proteins, tetR family 83 127 2.9E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS12180 015175945cd26cbbd175b8a45466c608 294 SUPERFAMILY SSF48179 166 289 7.71E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS12180 015175945cd26cbbd175b8a45466c608 294 Gene3D G3DSA:3.40.50.720 2 169 5.9E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS12180 015175945cd26cbbd175b8a45466c608 294 PIRSF PIRSF000103 1 293 6.6E-67 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 R615_RS12180 015175945cd26cbbd175b8a45466c608 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 288 2.9E-25 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 R615_RS12180 015175945cd26cbbd175b8a45466c608 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 165 8.5E-45 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 R615_RS12180 015175945cd26cbbd175b8a45466c608 294 PANTHER PTHR22981 1 289 5.8E-119 T 22-04-2016 R615_RS12180 015175945cd26cbbd175b8a45466c608 294 Gene3D G3DSA:1.10.1040.10 170 289 2.4E-29 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS12180 015175945cd26cbbd175b8a45466c608 294 PANTHER PTHR22981:SF48 1 289 5.8E-119 T 22-04-2016 R615_RS12180 015175945cd26cbbd175b8a45466c608 294 SUPERFAMILY SSF51735 5 167 7.89E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS16625 0827875600c0becfca202aed59cb4c02 605 SUPERFAMILY SSF52540 4 219 6.59E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16625 0827875600c0becfca202aed59cb4c02 605 PANTHER PTHR23115:SF14 6 593 7.4E-287 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 134 1.1E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 Gene3D G3DSA:3.30.70.240 402 478 2.7E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain R615_RS16625 0827875600c0becfca202aed59cb4c02 605 SUPERFAMILY SSF54980 302 387 1.87E-14 T 22-04-2016 IPR009022 Elongation factor G, III-V domain R615_RS16625 0827875600c0becfca202aed59cb4c02 605 PANTHER PTHR23115 6 593 7.4E-287 T 22-04-2016 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 Pfam PF03144 Elongation factor Tu domain 2 219 289 3.2E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 SUPERFAMILY SSF54980 398 512 4.27E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain R615_RS16625 0827875600c0becfca202aed59cb4c02 605 Pfam PF00679 Elongation factor G C-terminus 396 477 9.6E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain R615_RS16625 0827875600c0becfca202aed59cb4c02 605 Gene3D G3DSA:3.30.70.870 304 401 1.8E-35 T 22-04-2016 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 Gene3D G3DSA:2.40.30.10 206 303 7.8E-26 T 22-04-2016 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 Pfam PF00009 Elongation factor Tu GTP binding domain 6 194 4.8E-56 T 22-04-2016 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 599 9.2E-285 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site R615_RS16625 0827875600c0becfca202aed59cb4c02 605 Gene3D G3DSA:2.40.50.250 483 577 1.1E-40 T 22-04-2016 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 PRINTS PR00315 GTP-binding elongation factor signature 123 132 3.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 PRINTS PR00315 GTP-binding elongation factor signature 51 59 3.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 PRINTS PR00315 GTP-binding elongation factor signature 71 81 3.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 PRINTS PR00315 GTP-binding elongation factor signature 7 20 3.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS16625 0827875600c0becfca202aed59cb4c02 605 SUPERFAMILY SSF50447 151 299 6.24E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS16625 0827875600c0becfca202aed59cb4c02 605 Gene3D G3DSA:3.40.50.300 5 205 3.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04925 af74445bc6fa821ba2330257b69dfec3 227 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 10 226 39.89 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 R615_RS04925 af74445bc6fa821ba2330257b69dfec3 227 Gene3D G3DSA:3.40.470.10 6 226 4.6E-97 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like R615_RS04925 af74445bc6fa821ba2330257b69dfec3 227 SUPERFAMILY SSF52141 9 226 3.92E-90 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like R615_RS04925 af74445bc6fa821ba2330257b69dfec3 227 SMART SM00987 55 215 9.0E-37 T 22-04-2016 R615_RS04925 af74445bc6fa821ba2330257b69dfec3 227 SMART SM00986 55 215 9.0E-37 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like R615_RS04925 af74445bc6fa821ba2330257b69dfec3 227 Pfam PF03167 Uracil DNA glycosylase superfamily 58 214 1.6E-22 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like R615_RS04925 af74445bc6fa821ba2330257b69dfec3 227 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 11 219 5.0E-80 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 R615_RS04925 af74445bc6fa821ba2330257b69dfec3 227 PANTHER PTHR11264 9 226 2.4E-132 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 R615_RS04925 af74445bc6fa821ba2330257b69dfec3 227 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 63 72 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 R615_RS09490 381320fc1eec753ee8049b64b882848f 471 Pfam PF00270 DEAD/DEAH box helicase 120 292 4.6E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS09490 381320fc1eec753ee8049b64b882848f 471 SUPERFAMILY SSF52540 170 457 5.63E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09490 381320fc1eec753ee8049b64b882848f 471 SMART SM00487 115 321 9.0E-52 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS09490 381320fc1eec753ee8049b64b882848f 471 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 250 258 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site R615_RS09490 381320fc1eec753ee8049b64b882848f 471 Gene3D G3DSA:3.40.50.300 311 469 2.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09490 381320fc1eec753ee8049b64b882848f 471 Pfam PF00271 Helicase conserved C-terminal domain 329 438 8.6E-28 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS09490 381320fc1eec753ee8049b64b882848f 471 Gene3D G3DSA:3.40.50.300 90 310 4.2E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09490 381320fc1eec753ee8049b64b882848f 471 SMART SM00490 357 438 2.1E-30 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS09490 381320fc1eec753ee8049b64b882848f 471 PANTHER PTHR24031:SF261 84 471 2.0E-162 T 22-04-2016 R615_RS09490 381320fc1eec753ee8049b64b882848f 471 PANTHER PTHR24031 84 471 2.0E-162 T 22-04-2016 R615_RS09490 381320fc1eec753ee8049b64b882848f 471 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 95 471 51.869 T 22-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 Gene3D G3DSA:3.50.50.60 120 236 2.1E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 SUPERFAMILY SSF51905 2 313 9.72E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.6E-79 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.6E-79 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.6E-79 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.6E-79 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.6E-79 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.6E-79 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.6E-79 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.6E-79 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.6E-79 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.7E-121 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PANTHER PTHR22912 1 315 1.2E-159 T 22-04-2016 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PANTHER PTHR22912:SF48 1 315 1.2E-159 T 22-04-2016 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 Gene3D G3DSA:3.50.50.60 5 119 2.5E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.2E-40 T 22-04-2016 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 4.2E-40 T 22-04-2016 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.2E-40 T 22-04-2016 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 4.2E-40 T 22-04-2016 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.2E-40 T 22-04-2016 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 Gene3D G3DSA:3.50.50.60 237 313 1.3E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS04465 24cb22a7e1e4d59dbd9de0bf6b962393 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 8.9E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 Pfam PF04545 Sigma-70, region 4 187 235 2.9E-18 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 SUPERFAMILY SSF88946 16 92 4.58E-25 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 238 1.6E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 PRINTS PR00046 Major sigma-70 factor signature 223 234 1.4E-11 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 PRINTS PR00046 Major sigma-70 factor signature 208 223 1.4E-11 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 PRINTS PR00046 Major sigma-70 factor signature 191 203 1.4E-11 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 PRINTS PR00046 Major sigma-70 factor signature 47 60 1.4E-11 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 Gene3D G3DSA:1.10.601.10 18 88 7.7E-18 T 22-04-2016 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 Gene3D G3DSA:1.10.10.10 175 240 1.3E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 PANTHER PTHR30385:SF7 18 241 2.3E-70 T 22-04-2016 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 PANTHER PTHR30385 18 241 2.3E-70 T 22-04-2016 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 Pfam PF04542 Sigma-70 region 2 20 92 2.4E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 6 241 65.826 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 Gene3D G3DSA:1.10.10.10 94 139 4.3E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 SUPERFAMILY SSF88659 164 241 4.3E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 Pfam PF04539 Sigma-70 region 3 101 155 1.6E-9 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 6.5E-81 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 SUPERFAMILY SSF88659 94 160 5.67E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS05110 a448305fd74ecce49f4ecddb6786b66c 244 PIRSF PIRSF000770 7 243 2.4E-38 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 R615_RS00410 1f2b8b019bb8f6dd0b354dd1a47820cc 372 Pfam PF15887 Putative zinc-binding metallo-peptidase 105 366 2.2E-100 T 22-04-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase R615_RS00410 1f2b8b019bb8f6dd0b354dd1a47820cc 372 PIRSF PIRSF012641 1 372 2.9E-116 T 22-04-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase R615_RS00410 1f2b8b019bb8f6dd0b354dd1a47820cc 372 Pfam PF10005 zinc-ribbon domain 4 99 3.7E-14 T 22-04-2016 IPR011201 Zinc-ribbon domain, bacteria R615_RS14335 862876ecf0584b0ff5705d0f57a9fb28 64 PANTHER PTHR34984 1 56 6.3E-31 T 22-04-2016 R615_RS14335 862876ecf0584b0ff5705d0f57a9fb28 64 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 56 2.1E-29 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 R615_RS14335 862876ecf0584b0ff5705d0f57a9fb28 64 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-19 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 R615_RS14335 862876ecf0584b0ff5705d0f57a9fb28 64 Pfam PF02599 Global regulator protein family 1 52 5.0E-26 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 R615_RS14335 862876ecf0584b0ff5705d0f57a9fb28 64 PANTHER PTHR34984:SF1 1 56 6.3E-31 T 22-04-2016 R615_RS14335 862876ecf0584b0ff5705d0f57a9fb28 64 SUPERFAMILY SSF117130 1 54 1.83E-20 T 22-04-2016 R615_RS14335 862876ecf0584b0ff5705d0f57a9fb28 64 Hamap MF_00167 Carbon storage regulator [csrA]. 1 63 21.108 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 R615_RS11570 d031f525340eeb8ad57ffd6dea38437a 83 Pfam PF05768 Glutaredoxin-like domain (DUF836) 4 74 1.9E-12 T 22-04-2016 IPR008554 Glutaredoxin-like R615_RS11570 d031f525340eeb8ad57ffd6dea38437a 83 SUPERFAMILY SSF52833 1 76 2.69E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11570 d031f525340eeb8ad57ffd6dea38437a 83 PANTHER PTHR34386:SF2 1 83 1.2E-16 T 22-04-2016 R615_RS11570 d031f525340eeb8ad57ffd6dea38437a 83 Gene3D G3DSA:3.40.30.10 1 80 2.0E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11570 d031f525340eeb8ad57ffd6dea38437a 83 PANTHER PTHR34386 1 83 1.2E-16 T 22-04-2016 R615_RS08075 4046c92151c5f8e93602543d1b7859f8 333 Gene3D G3DSA:3.30.465.10 78 232 9.1E-42 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 R615_RS08075 4046c92151c5f8e93602543d1b7859f8 333 Pfam PF01565 FAD binding domain 22 145 5.8E-14 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 R615_RS08075 4046c92151c5f8e93602543d1b7859f8 333 Gene3D G3DSA:3.90.78.10 233 332 1.2E-36 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS08075 4046c92151c5f8e93602543d1b7859f8 333 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 333 63.184 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS08075 4046c92151c5f8e93602543d1b7859f8 333 SUPERFAMILY SSF56194 207 332 1.11E-39 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS08075 4046c92151c5f8e93602543d1b7859f8 333 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 13 328 2.5E-57 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS08075 4046c92151c5f8e93602543d1b7859f8 333 PANTHER PTHR21071:SF6 1 331 3.2E-117 T 22-04-2016 R615_RS08075 4046c92151c5f8e93602543d1b7859f8 333 Gene3D G3DSA:3.30.43.10 8 68 2.1E-13 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 R615_RS08075 4046c92151c5f8e93602543d1b7859f8 333 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 212 331 2.5E-29 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS08075 4046c92151c5f8e93602543d1b7859f8 333 PANTHER PTHR21071 1 331 3.2E-117 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS08075 4046c92151c5f8e93602543d1b7859f8 333 SUPERFAMILY SSF56176 8 201 9.27E-33 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 R615_RS06120 84d1507efeb4f517b39fa8f8681dc2e6 392 SUPERFAMILY SSF48452 179 258 8.06E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS06120 84d1507efeb4f517b39fa8f8681dc2e6 392 SUPERFAMILY SSF48452 109 140 8.06E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS06120 84d1507efeb4f517b39fa8f8681dc2e6 392 Pfam PF13432 Tetratricopeptide repeat 184 245 9.8E-6 T 22-04-2016 R615_RS06120 84d1507efeb4f517b39fa8f8681dc2e6 392 Gene3D G3DSA:1.25.40.10 180 313 1.6E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS06120 84d1507efeb4f517b39fa8f8681dc2e6 392 SMART SM00028 213 246 0.0024 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS06120 84d1507efeb4f517b39fa8f8681dc2e6 392 SMART SM00028 179 212 240.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS17035 43549a0fd123d7dda8f1abe4761b83da 223 SUPERFAMILY SSF46894 118 218 6.24E-23 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS17035 43549a0fd123d7dda8f1abe4761b83da 223 SMART SM00448 1 112 5.3E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17035 43549a0fd123d7dda8f1abe4761b83da 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 217 5.3E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS17035 43549a0fd123d7dda8f1abe4761b83da 223 Gene3D G3DSA:3.40.50.2300 2 123 2.1E-32 T 22-04-2016 R615_RS17035 43549a0fd123d7dda8f1abe4761b83da 223 Pfam PF00072 Response regulator receiver domain 4 112 4.9E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17035 43549a0fd123d7dda8f1abe4761b83da 223 SUPERFAMILY SSF52172 2 118 3.7E-35 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS17035 43549a0fd123d7dda8f1abe4761b83da 223 PANTHER PTHR26402:SF600 1 217 7.0E-87 T 22-04-2016 R615_RS17035 43549a0fd123d7dda8f1abe4761b83da 223 PANTHER PTHR26402 1 217 7.0E-87 T 22-04-2016 R615_RS17035 43549a0fd123d7dda8f1abe4761b83da 223 Gene3D G3DSA:1.10.10.10 124 219 4.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS17035 43549a0fd123d7dda8f1abe4761b83da 223 SMART SM00862 146 217 1.2E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS01700 53633d9a45511a61a77016a994f4f347 159 PANTHER PTHR38595 1 147 2.2E-15 T 22-04-2016 R615_RS01700 53633d9a45511a61a77016a994f4f347 159 SUPERFAMILY SSF160719 37 146 6.54E-10 T 22-04-2016 R615_RS01700 53633d9a45511a61a77016a994f4f347 159 Gene3D G3DSA:3.10.450.40 71 137 1.0E-5 T 22-04-2016 R615_RS01700 53633d9a45511a61a77016a994f4f347 159 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 12 154 8.5E-33 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein R615_RS01700 53633d9a45511a61a77016a994f4f347 159 Pfam PF04965 Gene 25-like lysozyme 36 135 3.3E-23 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 SUPERFAMILY SSF52016 169 394 4.91E-32 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 Gene3D G3DSA:3.20.19.10 169 385 2.5E-43 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 Pfam PF00330 Aconitase family (aconitate hydratase) 411 894 1.4E-57 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 SUPERFAMILY SSF53732 403 913 6.15E-71 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 PANTHER PTHR11670 822 912 2.8E-42 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 PANTHER PTHR11670 435 668 2.8E-42 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 PANTHER PTHR11670 693 800 2.8E-42 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 Pfam PF11791 Aconitate B N-terminal domain 7 162 7.1E-39 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 Gene3D G3DSA:3.30.499.10 432 557 2.3E-42 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 Pfam PF06434 Aconitate hydratase 2 N-terminus 177 406 8.8E-63 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 Gene3D G3DSA:3.40.1060.10 558 718 9.1E-49 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 Gene3D G3DSA:3.30.499.10 735 913 3.6E-34 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 PANTHER PTHR11670:SF39 822 912 2.8E-42 T 22-04-2016 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 PANTHER PTHR11670:SF39 435 668 2.8E-42 T 22-04-2016 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 PANTHER PTHR11670:SF39 693 800 2.8E-42 T 22-04-2016 R615_RS07785 5f911ebf5f94c07f3a704375abf3a900 931 SUPERFAMILY SSF74778 3 164 5.36E-38 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 R615_RS03355 d298f9af7dfce0dfc926d75c29f164bd 105 PRINTS PR01591 DNA-binding protein FIS signature 49 64 6.3E-13 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 R615_RS03355 d298f9af7dfce0dfc926d75c29f164bd 105 PRINTS PR01591 DNA-binding protein FIS signature 64 76 6.3E-13 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 R615_RS03355 d298f9af7dfce0dfc926d75c29f164bd 105 PRINTS PR01591 DNA-binding protein FIS signature 33 49 6.3E-13 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 R615_RS03355 d298f9af7dfce0dfc926d75c29f164bd 105 PIRSF PIRSF002097 4 105 1.8E-37 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 R615_RS03355 d298f9af7dfce0dfc926d75c29f164bd 105 Gene3D G3DSA:1.10.10.60 34 104 4.8E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS03355 d298f9af7dfce0dfc926d75c29f164bd 105 SUPERFAMILY SSF46689 33 104 1.12E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS03355 d298f9af7dfce0dfc926d75c29f164bd 105 PANTHER PTHR32071 4 104 2.1E-22 T 22-04-2016 R615_RS03355 d298f9af7dfce0dfc926d75c29f164bd 105 Pfam PF02954 Bacterial regulatory protein, Fis family 62 102 5.0E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS03355 d298f9af7dfce0dfc926d75c29f164bd 105 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 85 105 1.8E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS03355 d298f9af7dfce0dfc926d75c29f164bd 105 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 68 85 1.8E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS06210 8b92d5142b7117ee163c90844b70c5e0 198 PANTHER PTHR30576:SF8 1 185 3.9E-112 T 22-04-2016 R615_RS06210 8b92d5142b7117ee163c90844b70c5e0 198 PANTHER PTHR30576 1 185 3.9E-112 T 22-04-2016 R615_RS06210 8b92d5142b7117ee163c90844b70c5e0 198 Pfam PF02397 Bacterial sugar transferase 3 177 3.0E-60 T 22-04-2016 IPR003362 Bacterial sugar transferase R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 Gene3D G3DSA:2.170.130.10 221 322 1.4E-7 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 PANTHER PTHR30069 119 352 3.8E-17 T 22-04-2016 R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 SUPERFAMILY SSF49464 119 195 1.7E-12 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 Gene3D G3DSA:2.60.40.1120 126 208 6.5E-13 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 Pfam PF13620 Carboxypeptidase regulatory-like domain 126 195 7.3E-12 T 22-04-2016 R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 Pfam PF07715 TonB-dependent Receptor Plug Domain 222 321 1.4E-6 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 SUPERFAMILY SSF56935 204 345 2.12E-67 T 22-04-2016 R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 SUPERFAMILY SSF56935 441 477 2.12E-67 T 22-04-2016 R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 SUPERFAMILY SSF56935 520 994 2.12E-67 T 22-04-2016 R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 Pfam PF14905 Outer membrane protein beta-barrel family 663 986 6.6E-22 T 22-04-2016 R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 PANTHER PTHR30069:SF11 119 352 3.8E-17 T 22-04-2016 R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 Gene3D G3DSA:2.40.170.20 416 467 1.4E-43 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 Gene3D G3DSA:2.40.170.20 507 994 1.4E-43 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS12635 f247c71cde58e717665f9e2b5bbf8bed 994 Gene3D G3DSA:2.40.170.20 323 331 1.4E-43 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS05865 72a8594d385495c5aba612f57259d00b 804 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 113 803 4.7E-279 T 22-04-2016 IPR010706 Fatty acid cis-trans isomerase R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 SUPERFAMILY SSF56053 1 82 2.75E-23 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.1E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.1E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.1E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.6E-75 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.356 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 PIRSF PIRSF002162 1 177 2.0E-46 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 Gene3D G3DSA:3.90.930.12 83 177 8.3E-41 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 SUPERFAMILY SSF56053 83 177 7.46E-37 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 Gene3D G3DSA:3.90.930.12 2 82 1.3E-28 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 PANTHER PTHR11655 1 176 1.2E-87 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 PANTHER PTHR11655:SF14 1 176 1.2E-87 T 22-04-2016 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 Pfam PF00347 Ribosomal protein L6 11 82 2.8E-16 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15800 596fcf7cb799bbd87cb6679fb6b673fe 177 Pfam PF00347 Ribosomal protein L6 91 164 9.8E-20 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS02585 27fd8048077f612ab0c75b5583d6cbb8 144 SUPERFAMILY SSF57716 104 141 1.57E-9 T 22-04-2016 R615_RS02585 27fd8048077f612ab0c75b5583d6cbb8 144 PANTHER PTHR33823 1 141 1.4E-58 T 22-04-2016 R615_RS02585 27fd8048077f612ab0c75b5583d6cbb8 144 SUPERFAMILY SSF109635 9 103 2.48E-33 T 22-04-2016 R615_RS02585 27fd8048077f612ab0c75b5583d6cbb8 144 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 25 133 2.1E-50 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 R615_RS02585 27fd8048077f612ab0c75b5583d6cbb8 144 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 102 136 1.1E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 R615_RS02585 27fd8048077f612ab0c75b5583d6cbb8 144 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 21 143 29.565 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 R615_RS02585 27fd8048077f612ab0c75b5583d6cbb8 144 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 107 131 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site R615_RS02585 27fd8048077f612ab0c75b5583d6cbb8 144 PANTHER PTHR33823:SF2 1 141 1.4E-58 T 22-04-2016 R615_RS04100 65ea07d3098e900f54f884b0b43f1342 85 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 3.0E-11 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor R615_RS04100 65ea07d3098e900f54f884b0b43f1342 85 PANTHER PTHR40613 2 72 1.5E-27 T 22-04-2016 R615_RS04100 65ea07d3098e900f54f884b0b43f1342 85 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 1.4E-29 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor R615_RS04100 65ea07d3098e900f54f884b0b43f1342 85 PANTHER PTHR40613:SF1 2 72 1.5E-27 T 22-04-2016 R615_RS04680 a3bb6d8476a7a6acf6587afc08aaaf5c 219 PANTHER PTHR24032:SF31 2 143 3.2E-21 T 22-04-2016 R615_RS04680 a3bb6d8476a7a6acf6587afc08aaaf5c 219 Gene3D G3DSA:3.60.21.10 12 214 2.0E-35 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS04680 a3bb6d8476a7a6acf6587afc08aaaf5c 219 SUPERFAMILY SSF56300 13 215 1.29E-36 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS04680 a3bb6d8476a7a6acf6587afc08aaaf5c 219 Pfam PF00149 Calcineurin-like phosphoesterase 20 190 1.0E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 R615_RS04680 a3bb6d8476a7a6acf6587afc08aaaf5c 219 PANTHER PTHR24032 2 143 3.2E-21 T 22-04-2016 R615_RS16035 8cb9d2ce7148432c87512e9daced9d0e 618 Pfam PF02690 Na+/Pi-cotransporter 202 274 3.0E-10 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 R615_RS16035 8cb9d2ce7148432c87512e9daced9d0e 618 Pfam PF02690 Na+/Pi-cotransporter 36 174 3.8E-35 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 R615_RS16035 8cb9d2ce7148432c87512e9daced9d0e 618 PANTHER PTHR10010:SF26 24 472 1.8E-42 T 22-04-2016 R615_RS16035 8cb9d2ce7148432c87512e9daced9d0e 618 PANTHER PTHR10010 24 472 1.8E-42 T 22-04-2016 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 Gene3D G3DSA:3.30.450.20 619 726 2.3E-8 T 22-04-2016 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 SMART SM00388 749 814 8.8E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 PANTHER PTHR24423:SF497 26 43 3.6E-101 T 22-04-2016 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 PANTHER PTHR24423:SF497 624 976 3.6E-101 T 22-04-2016 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 Gene3D G3DSA:1.10.287.130 745 799 1.2E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 SUPERFAMILY SSF47384 745 812 8.44E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 Gene3D G3DSA:3.30.565.10 800 966 8.4E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 SUPERFAMILY SSF55874 808 966 1.96E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 SUPERFAMILY SSF55785 625 725 4.71E-8 T 22-04-2016 IPR000014 PAS domain R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 PRINTS PR00344 Bacterial sensor protein C-terminal signature 912 922 7.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 964 7.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 PRINTS PR00344 Bacterial sensor protein C-terminal signature 925 943 7.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 PRINTS PR00344 Bacterial sensor protein C-terminal signature 894 908 7.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 PANTHER PTHR24423 26 43 3.6E-101 T 22-04-2016 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 PANTHER PTHR24423 624 976 3.6E-101 T 22-04-2016 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 Pfam PF00512 His Kinase A (phospho-acceptor) domain 750 811 3.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 Pfam PF00989 PAS fold 629 674 1.6E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 857 965 2.2E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS02570 7e50250360fe00b7658a353bae4508ab 976 SMART SM00387 857 967 1.4E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04145 0dee1fa71aa29ecc53261f6fa75b423a 254 SMART SM00382 39 231 0.0029 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS04145 0dee1fa71aa29ecc53261f6fa75b423a 254 Gene3D G3DSA:3.40.50.300 12 251 2.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04145 0dee1fa71aa29ecc53261f6fa75b423a 254 SUPERFAMILY SSF52540 13 252 5.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04145 0dee1fa71aa29ecc53261f6fa75b423a 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 253 1.1E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal R615_RS04145 0dee1fa71aa29ecc53261f6fa75b423a 254 PANTHER PTHR24220:SF366 16 253 1.1E-132 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD R615_RS04145 0dee1fa71aa29ecc53261f6fa75b423a 254 PANTHER PTHR24220 16 253 1.1E-132 T 22-04-2016 R615_RS04145 0dee1fa71aa29ecc53261f6fa75b423a 254 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 14 254 9.8E-117 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD R615_RS04145 0dee1fa71aa29ecc53261f6fa75b423a 254 Pfam PF00005 ABC transporter 31 184 1.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS10285 e192a89ffa30469bd63cf8216fd5f31e 231 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 13 201 3.1E-54 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 R615_RS10285 e192a89ffa30469bd63cf8216fd5f31e 231 SMART SM00900 108 200 8.2E-35 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 R615_RS10285 e192a89ffa30469bd63cf8216fd5f31e 231 PIRSF PIRSF006091 1 212 1.7E-68 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 R615_RS10285 e192a89ffa30469bd63cf8216fd5f31e 231 PANTHER PTHR36118:SF1 4 219 1.4E-54 T 22-04-2016 R615_RS10285 e192a89ffa30469bd63cf8216fd5f31e 231 PANTHER PTHR36118 4 219 1.4E-54 T 22-04-2016 R615_RS10285 e192a89ffa30469bd63cf8216fd5f31e 231 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 5 202 24.215 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 R615_RS10285 e192a89ffa30469bd63cf8216fd5f31e 231 Pfam PF04205 FMN-binding domain 108 197 3.2E-20 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 R615_RS12375 dcc4fa554cfd7b83a93329b4feb3912c 426 Gene3D G3DSA:3.40.50.800 329 423 1.4E-27 T 22-04-2016 IPR004154 Anticodon-binding R615_RS12375 dcc4fa554cfd7b83a93329b4feb3912c 426 PIRSF PIRSF001549 1 425 4.6E-122 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 R615_RS12375 dcc4fa554cfd7b83a93329b4feb3912c 426 Gene3D G3DSA:3.30.930.10 221 322 1.9E-96 T 22-04-2016 R615_RS12375 dcc4fa554cfd7b83a93329b4feb3912c 426 Gene3D G3DSA:3.30.930.10 3 185 1.9E-96 T 22-04-2016 R615_RS12375 dcc4fa554cfd7b83a93329b4feb3912c 426 SUPERFAMILY SSF55681 5 322 2.79E-105 T 22-04-2016 R615_RS12375 dcc4fa554cfd7b83a93329b4feb3912c 426 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 423 33.054 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 R615_RS12375 dcc4fa554cfd7b83a93329b4feb3912c 426 Pfam PF03129 Anticodon binding domain 344 423 1.3E-7 T 22-04-2016 IPR004154 Anticodon-binding R615_RS12375 dcc4fa554cfd7b83a93329b4feb3912c 426 SUPERFAMILY SSF52954 329 423 5.73E-20 T 22-04-2016 IPR004154 Anticodon-binding R615_RS12375 dcc4fa554cfd7b83a93329b4feb3912c 426 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 410 1.5E-154 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 R615_RS12375 dcc4fa554cfd7b83a93329b4feb3912c 426 Pfam PF13393 Histidyl-tRNA synthetase 10 312 5.6E-45 T 22-04-2016 R615_RS12375 dcc4fa554cfd7b83a93329b4feb3912c 426 PANTHER PTHR11476 1 426 3.0E-217 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 R615_RS12375 dcc4fa554cfd7b83a93329b4feb3912c 426 PANTHER PTHR11476:SF9 1 426 3.0E-217 T 22-04-2016 R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 SUPERFAMILY SSF52335 7 195 1.96E-67 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 Gene3D G3DSA:3.40.140.20 252 375 8.4E-46 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 533 1.8E-234 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 PANTHER PTHR11692 5 533 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 SMART SM00851 19 132 9.7E-58 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 464 7.8E-117 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 SUPERFAMILY SSF53927 220 533 1.81E-128 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 Gene3D G3DSA:3.40.50.1380 5 189 1.4E-80 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 Pfam PF02142 MGS-like domain 19 132 6.8E-28 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 PANTHER PTHR11692:SF2 5 533 0.0 T 22-04-2016 R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 533 44.989 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 PIRSF PIRSF000414 1 533 2.0E-216 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 Gene3D G3DSA:3.40.140.20 381 523 7.5E-63 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 R615_RS03350 bb24448c807a17a8fc5113f248ee8e73 533 SMART SM00798 137 465 3.1E-209 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 R615_RS00375 8290dc5e5aa5056db3d2d229d83a28b8 225 PANTHER PTHR11649 14 201 5.2E-49 T 22-04-2016 R615_RS00375 8290dc5e5aa5056db3d2d229d83a28b8 225 Gene3D G3DSA:3.40.50.300 22 200 1.0E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00375 8290dc5e5aa5056db3d2d229d83a28b8 225 SUPERFAMILY SSF52540 23 201 2.66E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00375 8290dc5e5aa5056db3d2d229d83a28b8 225 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 14 197 6.8E-72 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 R615_RS00375 8290dc5e5aa5056db3d2d229d83a28b8 225 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 17 201 27.688 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 R615_RS00375 8290dc5e5aa5056db3d2d229d83a28b8 225 Pfam PF01926 50S ribosome-binding GTPase 31 150 3.0E-19 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS12095 5242e561c20991357b8d7a31bbfda3ec 358 Gene3D G3DSA:1.10.530.10 189 356 5.6E-42 T 22-04-2016 R615_RS12095 5242e561c20991357b8d7a31bbfda3ec 358 Pfam PF11873 Domain of unknown function (DUF3393) 50 188 5.5E-44 T 22-04-2016 IPR024570 Murein transglycosylase-C, N-terminal R615_RS12095 5242e561c20991357b8d7a31bbfda3ec 358 SUPERFAMILY SSF53955 160 356 2.82E-36 T 22-04-2016 IPR023346 Lysozyme-like domain R615_RS12095 5242e561c20991357b8d7a31bbfda3ec 358 PANTHER PTHR21666 174 358 1.3E-43 T 22-04-2016 R615_RS12095 5242e561c20991357b8d7a31bbfda3ec 358 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 212 240 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 R615_RS12095 5242e561c20991357b8d7a31bbfda3ec 358 Pfam PF01464 Transglycosylase SLT domain 196 319 1.8E-29 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 Gene3D G3DSA:3.40.50.300 9 282 1.1E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 148 3.3E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 Gene3D G3DSA:3.30.70.870 395 464 5.5E-15 T 22-04-2016 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.091 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 Gene3D G3DSA:2.40.30.10 293 394 7.9E-24 T 22-04-2016 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 SUPERFAMILY SSF52540 10 277 9.16E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 6.5E-259 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 9.4E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 SUPERFAMILY SSF50447 262 393 2.43E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.9E-46 T 22-04-2016 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 SUPERFAMILY SSF54980 393 468 1.29E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 5.2E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 5.2E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 5.2E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 5.2E-10 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 PANTHER PTHR23115:SF69 7 184 8.8E-238 T 22-04-2016 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 PANTHER PTHR23115:SF69 251 472 8.8E-238 T 22-04-2016 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 7.4E-46 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 PANTHER PTHR23115 7 184 8.8E-238 T 22-04-2016 R615_RS01835 0856cd5abe6c060bec04bc2740572d20 529 PANTHER PTHR23115 251 472 8.8E-238 T 22-04-2016 R615_RS09160 0499cd5596ae0270e5efdd817506c828 292 Pfam PF13714 Phosphoenolpyruvate phosphomutase 7 251 5.4E-50 T 22-04-2016 R615_RS09160 0499cd5596ae0270e5efdd817506c828 292 ProSitePatterns PS00161 Isocitrate lyase signature. 117 122 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 R615_RS09160 0499cd5596ae0270e5efdd817506c828 292 SUPERFAMILY SSF51621 4 285 5.38E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS09160 0499cd5596ae0270e5efdd817506c828 292 PANTHER PTHR21631:SF4 1 291 2.8E-151 T 22-04-2016 R615_RS09160 0499cd5596ae0270e5efdd817506c828 292 Gene3D G3DSA:3.20.20.60 3 282 7.9E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS09160 0499cd5596ae0270e5efdd817506c828 292 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 1 288 48.905 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 R615_RS09160 0499cd5596ae0270e5efdd817506c828 292 PANTHER PTHR21631 1 291 2.8E-151 T 22-04-2016 R615_RS09160 0499cd5596ae0270e5efdd817506c828 292 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 4 287 1.7E-128 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 R615_RS08500 8513250f9dce3e688a8313e8ea73f8fd 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 6.0E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS08500 8513250f9dce3e688a8313e8ea73f8fd 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 6.0E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS08500 8513250f9dce3e688a8313e8ea73f8fd 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 6.0E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS08500 8513250f9dce3e688a8313e8ea73f8fd 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 537 1.4E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS08500 8513250f9dce3e688a8313e8ea73f8fd 539 SMART SM00304 208 262 2.1E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS08500 8513250f9dce3e688a8313e8ea73f8fd 539 SUPERFAMILY SSF58104 230 539 8.76E-78 T 22-04-2016 R615_RS08500 8513250f9dce3e688a8313e8ea73f8fd 539 PANTHER PTHR32089:SF34 176 539 7.7E-119 T 22-04-2016 R615_RS08500 8513250f9dce3e688a8313e8ea73f8fd 539 PANTHER PTHR32089 176 539 7.7E-119 T 22-04-2016 R615_RS08500 8513250f9dce3e688a8313e8ea73f8fd 539 Gene3D G3DSA:1.10.287.950 292 507 1.1E-54 T 22-04-2016 R615_RS08500 8513250f9dce3e688a8313e8ea73f8fd 539 SMART SM00283 277 538 2.5E-77 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS08500 8513250f9dce3e688a8313e8ea73f8fd 539 Pfam PF00672 HAMP domain 189 259 1.9E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS15340 c4384fe3b3a0ebbea4ce8ef2978775c0 465 Gene3D G3DSA:1.10.860.10 21 123 1.3E-38 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal R615_RS15340 c4384fe3b3a0ebbea4ce8ef2978775c0 465 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 21 456 1.4E-166 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 R615_RS15340 c4384fe3b3a0ebbea4ce8ef2978775c0 465 Pfam PF03796 DnaB-like helicase C terminal domain 198 454 1.9E-109 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 R615_RS15340 c4384fe3b3a0ebbea4ce8ef2978775c0 465 Gene3D G3DSA:3.40.50.300 183 456 2.6E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15340 c4384fe3b3a0ebbea4ce8ef2978775c0 465 SUPERFAMILY SSF52540 186 455 9.12E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15340 c4384fe3b3a0ebbea4ce8ef2978775c0 465 PANTHER PTHR30153 5 464 4.8E-200 T 22-04-2016 R615_RS15340 c4384fe3b3a0ebbea4ce8ef2978775c0 465 SUPERFAMILY SSF48024 19 131 1.44E-36 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 R615_RS15340 c4384fe3b3a0ebbea4ce8ef2978775c0 465 Pfam PF00772 DnaB-like helicase N terminal domain 21 122 6.1E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 R615_RS02920 542c2443e26b9f08a5b539e5b30f62b1 86 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 8.0E-29 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 R615_RS02920 542c2443e26b9f08a5b539e5b30f62b1 86 PANTHER PTHR33404 1 85 4.6E-23 T 22-04-2016 R615_RS02920 542c2443e26b9f08a5b539e5b30f62b1 86 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 19.242 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 R615_RS02920 542c2443e26b9f08a5b539e5b30f62b1 86 SUPERFAMILY SSF55229 35 85 4.05E-15 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 R615_RS02920 542c2443e26b9f08a5b539e5b30f62b1 86 Pfam PF03776 Septum formation topological specificity factor MinE 16 83 2.8E-25 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 R615_RS02920 542c2443e26b9f08a5b539e5b30f62b1 86 Gene3D G3DSA:3.30.1070.10 36 86 5.2E-22 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 R615_RS02955 736483330e017b0fcb1e5341d1e7ee48 341 Pfam PF12833 Helix-turn-helix domain 263 339 1.8E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS02955 736483330e017b0fcb1e5341d1e7ee48 341 SUPERFAMILY SSF46689 291 340 8.96E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS02955 736483330e017b0fcb1e5341d1e7ee48 341 PANTHER PTHR11019:SF52 241 341 1.5E-31 T 22-04-2016 R615_RS02955 736483330e017b0fcb1e5341d1e7ee48 341 PANTHER PTHR11019 241 341 1.5E-31 T 22-04-2016 R615_RS02955 736483330e017b0fcb1e5341d1e7ee48 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 213 1.5E-45 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS02955 736483330e017b0fcb1e5341d1e7ee48 341 Gene3D G3DSA:1.10.10.60 291 340 8.9E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS02955 736483330e017b0fcb1e5341d1e7ee48 341 SMART SM00342 256 338 1.3E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 SUPERFAMILY SSF63411 796 969 3.5E-38 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 SUPERFAMILY SSF63411 536 780 1.18E-44 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 Gene3D G3DSA:3.30.830.10 46 258 2.5E-37 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 Pfam PF05193 Peptidase M16 inactive domain 806 898 3.4E-5 T 22-04-2016 IPR007863 Peptidase M16, C-terminal R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 Pfam PF05193 Peptidase M16 inactive domain 221 406 2.7E-14 T 22-04-2016 IPR007863 Peptidase M16, C-terminal R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 PANTHER PTHR11851:SF150 420 962 2.6E-234 T 22-04-2016 R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 PANTHER PTHR11851:SF150 25 404 2.6E-234 T 22-04-2016 R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 SUPERFAMILY SSF63411 275 537 2.17E-53 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 Pfam PF08367 Peptidase M16C associated 480 721 1.1E-53 T 22-04-2016 IPR013578 Peptidase M16C associated GO:0006508 R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 SMART SM01264 480 727 9.1E-66 T 22-04-2016 IPR013578 Peptidase M16C associated GO:0006508 R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 SUPERFAMILY SSF63411 25 258 3.67E-47 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 Gene3D G3DSA:3.30.830.10 816 965 4.5E-5 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 Pfam PF00675 Insulinase (Peptidase family M16) 72 158 1.8E-8 T 22-04-2016 IPR011765 Peptidase M16, N-terminal R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 PANTHER PTHR11851 420 962 2.6E-234 T 22-04-2016 R615_RS09030 0d347ccdadaaca10d5fb6be6b74e024d 984 PANTHER PTHR11851 25 404 2.6E-234 T 22-04-2016 R615_RS16470 5b2c61c46482c7f5b9edcf3269bda459 258 Gene3D G3DSA:3.40.50.150 13 235 1.6E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS16470 5b2c61c46482c7f5b9edcf3269bda459 258 Pfam PF08241 Methyltransferase domain 80 182 1.1E-4 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 R615_RS16470 5b2c61c46482c7f5b9edcf3269bda459 258 SUPERFAMILY SSF53335 10 223 1.15E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS11615 61342d8ff834a1cd16f2b6f055db8c4b 192 Gene3D G3DSA:1.20.1540.10 4 176 3.3E-13 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 R615_RS11615 61342d8ff834a1cd16f2b6f055db8c4b 192 Pfam PF01694 Rhomboid family 34 176 2.2E-10 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 R615_RS11615 61342d8ff834a1cd16f2b6f055db8c4b 192 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 25 174 4.1E-40 T 22-04-2016 IPR023826 Rhomboid-like serine protease, proteobacteria R615_RS11615 61342d8ff834a1cd16f2b6f055db8c4b 192 PANTHER PTHR22936:SF18 25 172 1.1E-17 T 22-04-2016 R615_RS11615 61342d8ff834a1cd16f2b6f055db8c4b 192 SUPERFAMILY SSF144091 3 175 4.84E-19 T 22-04-2016 R615_RS11615 61342d8ff834a1cd16f2b6f055db8c4b 192 PANTHER PTHR22936 25 172 1.1E-17 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 PANTHER PTHR19376:SF32 570 944 0.0 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 PANTHER PTHR19376:SF32 964 1158 0.0 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 PANTHER PTHR19376:SF32 4 551 0.0 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 PANTHER PTHR19376:SF32 1178 1263 0.0 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 PANTHER PTHR19376:SF32 1304 1387 0.0 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 Gene3D G3DSA:2.40.40.20 417 489 4.3E-37 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 Gene3D G3DSA:2.40.40.20 349 376 4.3E-37 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 Gene3D G3DSA:2.40.50.100 1157 1212 3.8E-5 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 1.4E-8 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 3.0E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.468 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 SUPERFAMILY SSF64484 16 945 0.0 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 SUPERFAMILY SSF64484 1134 1364 0.0 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 752 2.3E-18 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 643 5.6E-28 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 PANTHER PTHR19376 570 944 0.0 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 PANTHER PTHR19376 964 1158 0.0 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 PANTHER PTHR19376 4 551 0.0 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 PANTHER PTHR19376 1178 1263 0.0 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 PANTHER PTHR19376 1304 1387 0.0 T 22-04-2016 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1316 9.9E-76 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 SMART SM00663 235 514 7.6E-179 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15905 a00f380a7e56b31585685f3e28128bb6 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 342 2.3E-85 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS07510 7fc8b313faacc74fc8c3ec524e73e2a1 183 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 163 26.418 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 R615_RS07510 7fc8b313faacc74fc8c3ec524e73e2a1 183 PANTHER PTHR30437 1 172 1.8E-74 T 22-04-2016 R615_RS07510 7fc8b313faacc74fc8c3ec524e73e2a1 183 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 165 49.519 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 R615_RS07510 7fc8b313faacc74fc8c3ec524e73e2a1 183 SUPERFAMILY SSF46557 14 85 3.14E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 R615_RS07510 7fc8b313faacc74fc8c3ec524e73e2a1 183 PIRSF PIRSF006092 8 166 4.9E-44 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 R615_RS07510 7fc8b313faacc74fc8c3ec524e73e2a1 183 PANTHER PTHR30437:SF6 1 172 1.8E-74 T 22-04-2016 R615_RS07510 7fc8b313faacc74fc8c3ec524e73e2a1 183 Gene3D G3DSA:3.10.50.30 88 165 4.3E-25 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 R615_RS07510 7fc8b313faacc74fc8c3ec524e73e2a1 183 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 13 165 1.8E-63 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 R615_RS07510 7fc8b313faacc74fc8c3ec524e73e2a1 183 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 91 164 1.5E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 R615_RS07510 7fc8b313faacc74fc8c3ec524e73e2a1 183 Gene3D G3DSA:1.10.287.180 14 84 2.6E-21 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 R615_RS07510 7fc8b313faacc74fc8c3ec524e73e2a1 183 SUPERFAMILY SSF54534 89 165 3.27E-20 T 22-04-2016 R615_RS07510 7fc8b313faacc74fc8c3ec524e73e2a1 183 Pfam PF03449 Transcription elongation factor, N-terminal 14 83 1.0E-21 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 R615_RS15925 e7c60166e5e88ea9c55b1d32513099a4 231 PANTHER PTHR23105 17 225 7.8E-76 T 22-04-2016 R615_RS15925 e7c60166e5e88ea9c55b1d32513099a4 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.5E-99 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 R615_RS15925 e7c60166e5e88ea9c55b1d32513099a4 231 Gene3D G3DSA:3.30.190.20 161 226 3.7E-41 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 R615_RS15925 e7c60166e5e88ea9c55b1d32513099a4 231 Gene3D G3DSA:3.30.190.20 19 68 3.7E-41 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 R615_RS15925 e7c60166e5e88ea9c55b1d32513099a4 231 Gene3D G3DSA:3.40.50.790 69 159 6.9E-40 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich R615_RS15925 e7c60166e5e88ea9c55b1d32513099a4 231 Pfam PF00687 Ribosomal protein L1p/L10e family 36 220 4.6E-47 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein R615_RS15925 e7c60166e5e88ea9c55b1d32513099a4 231 PIRSF PIRSF002155 1 227 4.2E-76 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 R615_RS15925 e7c60166e5e88ea9c55b1d32513099a4 231 SUPERFAMILY SSF56808 6 226 1.96E-78 T 22-04-2016 IPR023674 Ribosomal protein L1-like R615_RS15925 e7c60166e5e88ea9c55b1d32513099a4 231 PANTHER PTHR23105:SF5 17 225 7.8E-76 T 22-04-2016 R615_RS15925 e7c60166e5e88ea9c55b1d32513099a4 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site R615_RS15925 e7c60166e5e88ea9c55b1d32513099a4 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 41.488 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 R615_RS06155 6b450ada0f5f54067fe161ab34a7985b 360 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 357 1.5E-122 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase R615_RS06155 6b450ada0f5f54067fe161ab34a7985b 360 PANTHER PTHR30244:SF13 1 360 6.4E-107 T 22-04-2016 R615_RS06155 6b450ada0f5f54067fe161ab34a7985b 360 Gene3D G3DSA:3.40.640.10 10 242 9.7E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS06155 6b450ada0f5f54067fe161ab34a7985b 360 PIRSF PIRSF000390 1 360 1.2E-105 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase R615_RS06155 6b450ada0f5f54067fe161ab34a7985b 360 SUPERFAMILY SSF53383 13 358 1.61E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS06155 6b450ada0f5f54067fe161ab34a7985b 360 PANTHER PTHR30244 1 360 6.4E-107 T 22-04-2016 R615_RS06155 6b450ada0f5f54067fe161ab34a7985b 360 Gene3D G3DSA:3.90.1150.10 244 357 8.9E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS03690 c9488423c48c91981b519e56dd1ae3e5 509 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 5 227 1.0E-79 T 22-04-2016 IPR007357 Deoxyribodipyrimidine photolyase-related protein R615_RS03690 c9488423c48c91981b519e56dd1ae3e5 509 PANTHER PTHR38657 1 509 1.1E-203 T 22-04-2016 R615_RS03690 c9488423c48c91981b519e56dd1ae3e5 509 PANTHER PTHR38657:SF1 1 509 1.1E-203 T 22-04-2016 R615_RS03690 c9488423c48c91981b519e56dd1ae3e5 509 Gene3D G3DSA:1.25.40.80 227 319 1.2E-13 T 22-04-2016 R615_RS03690 c9488423c48c91981b519e56dd1ae3e5 509 Gene3D G3DSA:1.25.40.80 103 120 1.2E-13 T 22-04-2016 R615_RS03690 c9488423c48c91981b519e56dd1ae3e5 509 SUPERFAMILY SSF48173 230 493 3.66E-61 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain R615_RS14505 c34218f733eb0c6937f5d3cecc721a05 316 SUPERFAMILY SSF56042 147 301 1.54E-27 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS14505 c34218f733eb0c6937f5d3cecc721a05 316 PIRSF PIRSF005303 1 316 6.9E-70 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 R615_RS14505 c34218f733eb0c6937f5d3cecc721a05 316 Gene3D G3DSA:3.90.650.10 149 316 2.1E-32 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS14505 c34218f733eb0c6937f5d3cecc721a05 316 PANTHER PTHR30270 3 316 1.1E-82 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 R615_RS14505 c34218f733eb0c6937f5d3cecc721a05 316 Pfam PF02769 AIR synthase related protein, C-terminal domain 153 294 2.2E-5 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS14505 c34218f733eb0c6937f5d3cecc721a05 316 PANTHER PTHR30270:SF0 3 316 1.1E-82 T 22-04-2016 R615_RS14505 c34218f733eb0c6937f5d3cecc721a05 316 Gene3D G3DSA:3.30.1330.10 4 143 2.2E-35 T 22-04-2016 IPR016188 PurM-like, N-terminal domain R615_RS14505 c34218f733eb0c6937f5d3cecc721a05 316 Pfam PF00586 AIR synthase related protein, N-terminal domain 31 140 6.0E-17 T 22-04-2016 IPR016188 PurM-like, N-terminal domain R615_RS14505 c34218f733eb0c6937f5d3cecc721a05 316 SUPERFAMILY SSF55326 3 141 1.59E-30 T 22-04-2016 R615_RS14505 c34218f733eb0c6937f5d3cecc721a05 316 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 6 316 1.5E-78 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 R615_RS07355 1e4ece4d96e0e34f432b51e53c1a345f 439 PANTHER PTHR37419:SF2 1 357 3.6E-15 T 22-04-2016 R615_RS07355 1e4ece4d96e0e34f432b51e53c1a345f 439 Pfam PF13657 HipA N-terminal domain 6 116 1.3E-21 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 R615_RS07355 1e4ece4d96e0e34f432b51e53c1a345f 439 Pfam PF07804 HipA-like C-terminal domain 275 414 6.5E-31 T 22-04-2016 IPR012893 HipA-like, C-terminal R615_RS07355 1e4ece4d96e0e34f432b51e53c1a345f 439 PANTHER PTHR37419 1 357 3.6E-15 T 22-04-2016 R615_RS07355 1e4ece4d96e0e34f432b51e53c1a345f 439 Pfam PF07805 HipA-like N-terminal domain 176 269 1.6E-17 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 SUPERFAMILY SSF52540 64 404 7.64E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 52.783 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 PANTHER PTHR11262 7 416 1.5E-249 T 22-04-2016 R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 Gene3D G3DSA:1.10.8.60 318 417 3.8E-36 T 22-04-2016 R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 Pfam PF06689 ClpX C4-type zinc finger 16 53 1.0E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 Gene3D G3DSA:3.40.50.300 296 313 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 Gene3D G3DSA:3.40.50.300 68 256 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 SUPERFAMILY SSF57716 16 51 1.15E-11 T 22-04-2016 R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 312 4.5E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 SMART SM01086 319 414 2.1E-30 T 22-04-2016 IPR019489 Clp ATPase, C-terminal R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 SMART SM00994 15 54 2.5E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 SMART SM00382 114 335 7.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 14 414 4.8E-205 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 R615_RS08170 c2048b419eae0e2cc20cd7e3446193fa 428 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 3.1E-15 T 22-04-2016 IPR019489 Clp ATPase, C-terminal R615_RS09785 784643380b203d7a83dd48f49db928ff 406 Pfam PF00364 Biotin-requiring enzyme 4 75 6.5E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment R615_RS09785 784643380b203d7a83dd48f49db928ff 406 Pfam PF02817 e3 binding domain 103 138 7.5E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 R615_RS09785 784643380b203d7a83dd48f49db928ff 406 Gene3D G3DSA:2.40.50.100 1 96 1.5E-26 T 22-04-2016 R615_RS09785 784643380b203d7a83dd48f49db928ff 406 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site R615_RS09785 784643380b203d7a83dd48f49db928ff 406 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 176 404 1.1E-81 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 R615_RS09785 784643380b203d7a83dd48f49db928ff 406 SUPERFAMILY SSF52777 178 405 2.18E-90 T 22-04-2016 R615_RS09785 784643380b203d7a83dd48f49db928ff 406 PANTHER PTHR23151 3 406 1.5E-231 T 22-04-2016 R615_RS09785 784643380b203d7a83dd48f49db928ff 406 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 405 2.2E-179 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 R615_RS09785 784643380b203d7a83dd48f49db928ff 406 SUPERFAMILY SSF51230 1 95 1.16E-24 T 22-04-2016 IPR011053 Single hybrid motif R615_RS09785 784643380b203d7a83dd48f49db928ff 406 PANTHER PTHR23151:SF47 3 406 1.5E-231 T 22-04-2016 R615_RS09785 784643380b203d7a83dd48f49db928ff 406 SUPERFAMILY SSF47005 97 142 7.72E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 R615_RS09785 784643380b203d7a83dd48f49db928ff 406 Gene3D G3DSA:4.10.320.10 99 149 2.6E-18 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 R615_RS09785 784643380b203d7a83dd48f49db928ff 406 Gene3D G3DSA:3.30.559.10 174 404 1.2E-92 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 SUPERFAMILY SSF52490 14 205 4.06E-69 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 SMART SM00864 13 205 5.7E-114 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.3E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.3E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.3E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.3E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 Gene3D G3DSA:3.30.1330.20 215 321 5.0E-47 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 360 38.001 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 SUPERFAMILY SSF55307 204 320 2.27E-43 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 SMART SM00865 207 325 4.7E-58 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 328 8.2E-131 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 172 1.7E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 Gene3D G3DSA:3.40.50.1440 14 214 1.8E-92 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 PANTHER PTHR30314:SF3 1 386 3.2E-198 T 22-04-2016 R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 Pfam PF12327 FtsZ family, C-terminal domain 222 316 7.9E-37 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal R615_RS13090 01fa8c702336fc132eaa705aef6a1f8b 388 PANTHER PTHR30314 1 386 3.2E-198 T 22-04-2016 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 470 29.734 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 Gene3D G3DSA:1.10.1160.10 245 328 5.7E-31 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 PANTHER PTHR11451 3 321 2.6E-100 T 22-04-2016 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 PANTHER PTHR11451:SF41 3 321 2.6E-100 T 22-04-2016 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 319 3.9E-108 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 Gene3D G3DSA:3.90.800.10 68 193 8.0E-37 T 22-04-2016 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.31E-22 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 1.31E-22 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.31E-22 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.31E-22 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 1.31E-22 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 467 2.6E-129 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 SUPERFAMILY SSF52374 3 307 2.36E-109 T 22-04-2016 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 SUPERFAMILY SSF48163 313 470 4.84E-30 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 R615_RS07915 599d267c3d96122b3b502e564da635cf 504 Gene3D G3DSA:3.40.50.620 2 67 4.5E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS07915 599d267c3d96122b3b502e564da635cf 504 Gene3D G3DSA:3.40.50.620 194 243 4.5E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS07915 599d267c3d96122b3b502e564da635cf 504 Gene3D G3DSA:1.10.10.350 386 470 1.6E-9 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 R615_RS17635 dab565fad8658bb9aff215a50b50ba74 644 PANTHER PTHR38038:SF1 57 643 1.1E-112 T 22-04-2016 R615_RS17635 dab565fad8658bb9aff215a50b50ba74 644 PANTHER PTHR38038 57 643 1.1E-112 T 22-04-2016 R615_RS17635 dab565fad8658bb9aff215a50b50ba74 644 Gene3D G3DSA:3.40.50.2300 404 564 3.8E-48 T 22-04-2016 R615_RS17635 dab565fad8658bb9aff215a50b50ba74 644 Pfam PF04348 LppC putative lipoprotein 59 295 5.0E-40 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA R615_RS17635 dab565fad8658bb9aff215a50b50ba74 644 Pfam PF04348 LppC putative lipoprotein 340 636 9.3E-76 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA R615_RS17635 dab565fad8658bb9aff215a50b50ba74 644 Gene3D G3DSA:3.40.50.2300 327 402 8.5E-39 T 22-04-2016 R615_RS17635 dab565fad8658bb9aff215a50b50ba74 644 Gene3D G3DSA:3.40.50.2300 565 627 8.5E-39 T 22-04-2016 R615_RS17635 dab565fad8658bb9aff215a50b50ba74 644 Gene3D G3DSA:3.40.50.2300 243 276 8.5E-39 T 22-04-2016 R615_RS17635 dab565fad8658bb9aff215a50b50ba74 644 SUPERFAMILY SSF53822 329 462 1.82E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I R615_RS17635 dab565fad8658bb9aff215a50b50ba74 644 SUPERFAMILY SSF53822 490 639 1.82E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I R615_RS17635 dab565fad8658bb9aff215a50b50ba74 644 SUPERFAMILY SSF53822 245 273 1.82E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 Pfam PF00330 Aconitase family (aconitate hydratase) 8 464 2.9E-149 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PRINTS PR00415 Aconitase family signature 292 306 5.8E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PRINTS PR00415 Aconitase family signature 88 101 5.8E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PRINTS PR00415 Aconitase family signature 349 360 5.8E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PRINTS PR00415 Aconitase family signature 125 138 5.8E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PRINTS PR00415 Aconitase family signature 139 154 5.8E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PRINTS PR00415 Aconitase family signature 406 419 5.8E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PRINTS PR00415 Aconitase family signature 215 228 5.8E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PRINTS PR00415 Aconitase family signature 201 214 5.8E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PRINTS PR00415 Aconitase family signature 114 122 5.8E-45 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PANTHER PTHR11670 1 313 4.2E-270 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PANTHER PTHR11670 333 472 4.2E-270 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 Gene3D G3DSA:3.30.499.10 336 472 8.6E-60 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 1.6E-224 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 Gene3D G3DSA:3.40.1060.10 174 285 6.4E-37 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PANTHER PTHR11670:SF38 1 313 4.2E-270 T 22-04-2016 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 PANTHER PTHR11670:SF38 333 472 4.2E-270 T 22-04-2016 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 Gene3D G3DSA:3.30.499.10 4 162 1.6E-20 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 SUPERFAMILY SSF53732 2 472 1.96E-160 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09675 67c0fb954117c9c32d23ab55db912f27 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 472 58.522 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS14925 57d610a79a7822131e8cfabfd77f6f36 482 Pfam PF13401 AAA domain 49 174 2.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS14925 57d610a79a7822131e8cfabfd77f6f36 482 Gene3D G3DSA:3.40.50.300 48 150 8.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14925 57d610a79a7822131e8cfabfd77f6f36 482 Pfam PF05036 Sporulation related domain 395 472 2.9E-8 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 R615_RS14925 57d610a79a7822131e8cfabfd77f6f36 482 SUPERFAMILY SSF52540 45 238 1.37E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09230 384342c8f15a56daa9747def00fb823f 377 PANTHER PTHR11236:SF18 33 369 3.0E-111 T 22-04-2016 R615_RS09230 384342c8f15a56daa9747def00fb823f 377 PRINTS PR00095 Anthranilate synthase component I signature 310 324 1.9E-13 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 R615_RS09230 384342c8f15a56daa9747def00fb823f 377 PRINTS PR00095 Anthranilate synthase component I signature 325 339 1.9E-13 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 R615_RS09230 384342c8f15a56daa9747def00fb823f 377 PRINTS PR00095 Anthranilate synthase component I signature 230 243 1.9E-13 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 R615_RS09230 384342c8f15a56daa9747def00fb823f 377 PRINTS PR00095 Anthranilate synthase component I signature 216 229 1.9E-13 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 R615_RS09230 384342c8f15a56daa9747def00fb823f 377 SUPERFAMILY SSF56322 16 373 6.93E-104 T 22-04-2016 IPR005801 ADC synthase GO:0009058 R615_RS09230 384342c8f15a56daa9747def00fb823f 377 Pfam PF00425 chorismate binding enzyme 116 368 4.4E-82 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal R615_RS09230 384342c8f15a56daa9747def00fb823f 377 PANTHER PTHR11236 33 369 3.0E-111 T 22-04-2016 R615_RS09230 384342c8f15a56daa9747def00fb823f 377 Gene3D G3DSA:3.60.120.10 20 374 3.8E-107 T 22-04-2016 IPR005801 ADC synthase GO:0009058 R615_RS09230 384342c8f15a56daa9747def00fb823f 377 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 42 369 2.9E-99 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 R615_RS09450 33cb0451b49f8eda5bb5c8a05e827873 207 Gene3D G3DSA:1.20.1260.10 5 205 1.4E-85 T 22-04-2016 IPR012347 Ferritin-related R615_RS09450 33cb0451b49f8eda5bb5c8a05e827873 207 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 6 57 6.5E-16 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 R615_RS09450 33cb0451b49f8eda5bb5c8a05e827873 207 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 59 201 1.2E-57 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 R615_RS09450 33cb0451b49f8eda5bb5c8a05e827873 207 PIRSF PIRSF020736 1 206 6.8E-86 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 R615_RS09450 33cb0451b49f8eda5bb5c8a05e827873 207 PANTHER PTHR42637:SF1 1 207 2.0E-62 T 22-04-2016 R615_RS09450 33cb0451b49f8eda5bb5c8a05e827873 207 PANTHER PTHR42637 1 207 2.0E-62 T 22-04-2016 R615_RS09450 33cb0451b49f8eda5bb5c8a05e827873 207 SUPERFAMILY SSF47240 7 204 8.55E-76 T 22-04-2016 IPR009078 Ferritin-like superfamily R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Pfam PF00575 S1 RNA binding domain 625 696 3.8E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Gene3D G3DSA:3.30.230.70 318 549 3.7E-88 T 22-04-2016 IPR027408 PNPase/RNase PH domain R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Gene3D G3DSA:3.30.230.70 10 228 2.6E-84 T 22-04-2016 IPR027408 PNPase/RNase PH domain R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 SUPERFAMILY SSF50249 626 698 4.97E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 SUPERFAMILY SSF54211 9 147 9.62E-51 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 SUPERFAMILY SSF54211 310 498 3.09E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Pfam PF01138 3' exoribonuclease family, domain 1 330 462 2.2E-20 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Pfam PF01138 3' exoribonuclease family, domain 1 18 147 6.6E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 SUPERFAMILY SSF55666 148 238 7.85E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 PANTHER PTHR11252 9 700 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Gene3D G3DSA:1.10.10.400 245 317 1.1E-19 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Pfam PF00013 KH domain 564 619 2.3E-12 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Gene3D G3DSA:3.30.1370.10 558 625 2.7E-23 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 SMART SM00316 626 696 2.1E-23 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 PANTHER PTHR11252:SF0 9 700 0.0 T 22-04-2016 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 6 699 30.119 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 PIRSF PIRSF005499 5 700 3.2E-287 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Pfam PF03725 3' exoribonuclease family, domain 2 465 534 1.3E-6 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Pfam PF03725 3' exoribonuclease family, domain 2 150 214 3.0E-13 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Gene3D G3DSA:2.40.50.140 626 699 2.4E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 SUPERFAMILY SSF55666 456 554 6.34E-29 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 SMART SM00322 558 623 8.4E-12 T 22-04-2016 IPR004087 K Homology domain GO:0003676 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 SUPERFAMILY SSF54791 563 645 7.21E-21 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 13 697 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 SUPERFAMILY SSF46915 232 331 1.83E-19 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 R615_RS03965 5b17eba90ecb4873ceba446bbebf3c03 700 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 246 326 2.8E-19 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 R615_RS06280 0387f8ab36b8f87e9a6fea0d1f132c18 635 Gene3D G3DSA:2.120.10.20 315 634 3.2E-121 T 22-04-2016 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 R615_RS06280 0387f8ab36b8f87e9a6fea0d1f132c18 635 Gene3D G3DSA:2.120.10.20 97 262 4.7E-25 T 22-04-2016 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 R615_RS06280 0387f8ab36b8f87e9a6fea0d1f132c18 635 Pfam PF02333 Phytase 309 633 3.5E-89 T 22-04-2016 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 R615_RS06280 0387f8ab36b8f87e9a6fea0d1f132c18 635 Pfam PF02333 Phytase 149 222 6.6E-5 T 22-04-2016 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 R615_RS06280 0387f8ab36b8f87e9a6fea0d1f132c18 635 SUPERFAMILY SSF50956 315 634 2.35E-77 T 22-04-2016 R615_RS06280 0387f8ab36b8f87e9a6fea0d1f132c18 635 SUPERFAMILY SSF50956 91 257 4.97E-18 T 22-04-2016 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 Gene3D G3DSA:3.40.50.300 160 342 7.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 848 1.8E-23 T 22-04-2016 IPR019489 Clp ATPase, C-terminal R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 SMART SM00382 600 741 5.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 SMART SM00382 198 343 1.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 Gene3D G3DSA:1.10.8.60 343 428 4.8E-36 T 22-04-2016 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 SUPERFAMILY SSF81923 4 156 3.04E-37 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 599 762 1.6E-55 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 319 8.1E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.0E-10 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 64 3.1E-11 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 Gene3D G3DSA:3.40.50.300 553 779 3.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 Gene3D G3DSA:1.10.1780.10 1 147 6.8E-39 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 SUPERFAMILY SSF52540 549 859 2.7E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 Gene3D G3DSA:1.10.8.60 780 859 6.6E-29 T 22-04-2016 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 PANTHER PTHR11638:SF18 1 861 0.0 T 22-04-2016 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 SMART SM01086 769 858 2.5E-35 T 22-04-2016 IPR019489 Clp ATPase, C-terminal R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 1.5E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 1.5E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 1.5E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 1.5E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 PANTHER PTHR11638 1 861 0.0 T 22-04-2016 R615_RS06770 597d6075c2d8bd4034b9fa1ee4883aea 861 SUPERFAMILY SSF52540 159 548 1.22E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10240 cce5944c71a349db143a30c9f4325589 538 SMART SM00382 29 228 1.7E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS10240 cce5944c71a349db143a30c9f4325589 538 SMART SM00382 307 505 3.1E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS10240 cce5944c71a349db143a30c9f4325589 538 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS10240 cce5944c71a349db143a30c9f4325589 538 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS10240 cce5944c71a349db143a30c9f4325589 538 Gene3D G3DSA:3.40.50.300 268 531 6.2E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10240 cce5944c71a349db143a30c9f4325589 538 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 280 4.1E-6 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 R615_RS10240 cce5944c71a349db143a30c9f4325589 538 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 507 534 3.9E-5 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 R615_RS10240 cce5944c71a349db143a30c9f4325589 538 PANTHER PTHR24220 6 413 1.2E-164 T 22-04-2016 R615_RS10240 cce5944c71a349db143a30c9f4325589 538 Pfam PF00005 ABC transporter 21 178 1.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS10240 cce5944c71a349db143a30c9f4325589 538 Pfam PF00005 ABC transporter 299 456 9.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS10240 cce5944c71a349db143a30c9f4325589 538 SUPERFAMILY SSF52540 271 527 1.21E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10240 cce5944c71a349db143a30c9f4325589 538 SUPERFAMILY SSF52540 4 249 5.54E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10240 cce5944c71a349db143a30c9f4325589 538 PANTHER PTHR24220:SF574 6 413 1.2E-164 T 22-04-2016 R615_RS10240 cce5944c71a349db143a30c9f4325589 538 Gene3D G3DSA:3.40.50.300 3 252 2.0E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03870 defec544da3ef0cfd29e4f4801930dff 158 PANTHER PTHR30437 1 155 3.9E-62 T 22-04-2016 R615_RS03870 defec544da3ef0cfd29e4f4801930dff 158 Gene3D G3DSA:3.10.50.30 81 156 7.8E-29 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 R615_RS03870 defec544da3ef0cfd29e4f4801930dff 158 SUPERFAMILY SSF46557 3 77 5.75E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 R615_RS03870 defec544da3ef0cfd29e4f4801930dff 158 SUPERFAMILY SSF54534 82 156 4.19E-23 T 22-04-2016 R615_RS03870 defec544da3ef0cfd29e4f4801930dff 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 2.1E-55 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 R615_RS03870 defec544da3ef0cfd29e4f4801930dff 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 2.2E-29 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 R615_RS03870 defec544da3ef0cfd29e4f4801930dff 158 Gene3D G3DSA:1.10.287.180 1 75 6.8E-33 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 R615_RS03870 defec544da3ef0cfd29e4f4801930dff 158 PIRSF PIRSF006092 1 158 6.7E-47 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 R615_RS03870 defec544da3ef0cfd29e4f4801930dff 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 31.997 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 R615_RS03870 defec544da3ef0cfd29e4f4801930dff 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 R615_RS03870 defec544da3ef0cfd29e4f4801930dff 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 6.4E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 R615_RS03870 defec544da3ef0cfd29e4f4801930dff 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 R615_RS16110 0e08ec600c1cb2b7f0d9d6dd70b676ac 389 SUPERFAMILY SSF63825 148 365 7.85E-12 T 22-04-2016 R615_RS16110 0e08ec600c1cb2b7f0d9d6dd70b676ac 389 Pfam PF16261 Domain of unknown function (DUF4915) 133 371 2.8E-90 T 22-04-2016 IPR017481 Conserved hypothetical protein CHP03032 R615_RS16110 0e08ec600c1cb2b7f0d9d6dd70b676ac 389 Pfam PF16261 Domain of unknown function (DUF4915) 17 93 1.8E-14 T 22-04-2016 IPR017481 Conserved hypothetical protein CHP03032 R615_RS16110 0e08ec600c1cb2b7f0d9d6dd70b676ac 389 Gene3D G3DSA:2.130.10.10 235 360 7.1E-6 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 R615_RS16110 0e08ec600c1cb2b7f0d9d6dd70b676ac 389 TIGRFAM TIGR03032 TIGR03032: TIGR03032 family protein 132 377 1.1E-96 T 22-04-2016 IPR017481 Conserved hypothetical protein CHP03032 R615_RS01805 8437b6e0cba5a75e001f21ea1ab23dda 990 Pfam PF05860 haemagglutination activity domain 73 167 5.5E-16 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal R615_RS01805 8437b6e0cba5a75e001f21ea1ab23dda 990 SMART SM00912 55 173 1.1E-23 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal R615_RS01805 8437b6e0cba5a75e001f21ea1ab23dda 990 PANTHER PTHR12338:SF6 82 443 9.8E-17 T 22-04-2016 R615_RS01805 8437b6e0cba5a75e001f21ea1ab23dda 990 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 94 168 3.0E-15 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal R615_RS01805 8437b6e0cba5a75e001f21ea1ab23dda 990 PANTHER PTHR12338 82 443 9.8E-17 T 22-04-2016 R615_RS01805 8437b6e0cba5a75e001f21ea1ab23dda 990 SUPERFAMILY SSF51126 73 320 1.13E-19 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 Gene3D G3DSA:2.40.50.140 129 186 3.0E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 5.7E-19 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 PIRSF PIRSF005901 1 187 3.2E-57 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 SUPERFAMILY SSF50249 130 186 1.58E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 Hamap MF_00141 Elongation factor P [efp]. 1 186 46.398 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 SMART SM00841 130 185 5.9E-24 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 PANTHER PTHR30053 1 187 2.3E-69 T 22-04-2016 R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 2.8E-62 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 SMART SM01185 67 122 7.7E-19 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 SUPERFAMILY SSF50249 65 128 1.11E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 5.7E-16 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 Gene3D G3DSA:2.40.50.140 65 128 2.0E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 Gene3D G3DSA:2.30.30.30 1 62 5.3E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 SUPERFAMILY SSF50104 1 62 1.5E-16 T 22-04-2016 IPR008991 Translation protein SH3-like domain R615_RS12325 cc7ea07f1650031c73a458a98603f0a8 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 3.4E-20 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 R615_RS13125 9cfa7826cf108b37edcec8fb8c96225e 450 Gene3D G3DSA:3.40.1190.10 99 307 8.8E-67 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13125 9cfa7826cf108b37edcec8fb8c96225e 450 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 449 32.89 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS13125 9cfa7826cf108b37edcec8fb8c96225e 450 SUPERFAMILY SSF53623 102 305 3.14E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13125 9cfa7826cf108b37edcec8fb8c96225e 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 309 383 2.1E-7 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13125 9cfa7826cf108b37edcec8fb8c96225e 450 PANTHER PTHR23135 1 449 1.2E-138 T 22-04-2016 R615_RS13125 9cfa7826cf108b37edcec8fb8c96225e 450 Pfam PF08245 Mur ligase middle domain 115 287 1.8E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13125 9cfa7826cf108b37edcec8fb8c96225e 450 Gene3D G3DSA:3.90.190.20 309 444 1.4E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13125 9cfa7826cf108b37edcec8fb8c96225e 450 PANTHER PTHR23135:SF2 1 449 1.2E-138 T 22-04-2016 R615_RS13125 9cfa7826cf108b37edcec8fb8c96225e 450 Gene3D G3DSA:3.40.50.720 9 94 6.0E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS13125 9cfa7826cf108b37edcec8fb8c96225e 450 SUPERFAMILY SSF53244 307 449 1.92E-41 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13125 9cfa7826cf108b37edcec8fb8c96225e 450 SUPERFAMILY SSF51984 12 95 4.84E-12 T 22-04-2016 R615_RS13125 9cfa7826cf108b37edcec8fb8c96225e 450 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 447 1.2E-122 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS14125 6fd5f64464b9d428910575075965ee66 296 SMART SM00650 27 199 1.9E-90 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 R615_RS14125 6fd5f64464b9d428910575075965ee66 296 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 1.0E-84 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 R615_RS14125 6fd5f64464b9d428910575075965ee66 296 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 11 266 58.105 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 R615_RS14125 6fd5f64464b9d428910575075965ee66 296 Pfam PF00398 Ribosomal RNA adenine dimethylase 11 263 2.7E-68 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm R615_RS14125 6fd5f64464b9d428910575075965ee66 296 Gene3D G3DSA:1.10.8.100 202 266 2.7E-24 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like R615_RS14125 6fd5f64464b9d428910575075965ee66 296 PANTHER PTHR11727 7 295 2.2E-99 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm R615_RS14125 6fd5f64464b9d428910575075965ee66 296 Gene3D G3DSA:3.40.50.150 5 198 1.2E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS14125 6fd5f64464b9d428910575075965ee66 296 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 43 70 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 R615_RS14125 6fd5f64464b9d428910575075965ee66 296 SUPERFAMILY SSF53335 8 267 7.21E-83 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS15060 d731b8847e6578664b26e4707b7ae4cc 397 PANTHER PTHR11751 12 396 2.8E-119 T 22-04-2016 R615_RS15060 d731b8847e6578664b26e4707b7ae4cc 397 SUPERFAMILY SSF53383 2 395 9.65E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS15060 d731b8847e6578664b26e4707b7ae4cc 397 Pfam PF00155 Aminotransferase class I and II 32 378 7.5E-44 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 R615_RS15060 d731b8847e6578664b26e4707b7ae4cc 397 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 394 8.2E-195 T 22-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 R615_RS15060 d731b8847e6578664b26e4707b7ae4cc 397 Gene3D G3DSA:3.90.1150.10 265 396 4.7E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS15060 d731b8847e6578664b26e4707b7ae4cc 397 Gene3D G3DSA:3.40.640.10 44 264 3.8E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS15060 d731b8847e6578664b26e4707b7ae4cc 397 PANTHER PTHR11751:SF354 12 396 2.8E-119 T 22-04-2016 R615_RS03005 436edebbd676c8608eb105f120a2128c 66 Pfam PF10981 Protein of unknown function (DUF2788) 14 63 2.0E-18 T 22-04-2016 IPR021249 Protein of unknown function DUF2788 R615_RS11265 773d362c0e4e70c3605a6e379dd29f4f 163 Pfam PF13302 Acetyltransferase (GNAT) domain 4 137 5.0E-24 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS11265 773d362c0e4e70c3605a6e379dd29f4f 163 PANTHER PTHR23091 2 161 2.7E-33 T 22-04-2016 R615_RS11265 773d362c0e4e70c3605a6e379dd29f4f 163 SUPERFAMILY SSF55729 3 160 2.98E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS11265 773d362c0e4e70c3605a6e379dd29f4f 163 Gene3D G3DSA:3.40.630.30 2 161 1.0E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS11265 773d362c0e4e70c3605a6e379dd29f4f 163 PANTHER PTHR23091:SF190 2 161 2.7E-33 T 22-04-2016 R615_RS05335 5701a627b5d889ccaded24806d308bfa 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.358 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 R615_RS05335 5701a627b5d889ccaded24806d308bfa 243 PIRSF PIRSF005650 4 243 3.4E-89 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 R615_RS05335 5701a627b5d889ccaded24806d308bfa 243 SUPERFAMILY SSF53633 7 239 1.57E-69 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS05335 5701a627b5d889ccaded24806d308bfa 243 Gene3D G3DSA:3.40.1160.10 2 240 5.0E-83 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS05335 5701a627b5d889ccaded24806d308bfa 243 Pfam PF00696 Amino acid kinase family 10 218 7.0E-29 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS05335 5701a627b5d889ccaded24806d308bfa 243 PANTHER PTHR21499:SF23 3 243 3.8E-111 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 R615_RS05335 5701a627b5d889ccaded24806d308bfa 243 PANTHER PTHR21499 3 243 3.8E-111 T 22-04-2016 R615_RS05335 5701a627b5d889ccaded24806d308bfa 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 239 1.5E-98 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 R615_RS03990 e48d5f501ec485547e3444c30448ed80 273 SUPERFAMILY SSF54506 1 271 2.0E-68 T 22-04-2016 R615_RS03990 e48d5f501ec485547e3444c30448ed80 273 PIRSF PIRSF016184 1 271 1.2E-54 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- R615_RS03990 e48d5f501ec485547e3444c30448ed80 273 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 235 1.2E-35 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- R615_RS03990 e48d5f501ec485547e3444c30448ed80 273 Gene3D G3DSA:3.10.310.10 132 259 4.1E-40 T 22-04-2016 R615_RS03990 e48d5f501ec485547e3444c30448ed80 273 PANTHER PTHR13774 1 272 2.3E-93 T 22-04-2016 R615_RS03990 e48d5f501ec485547e3444c30448ed80 273 Gene3D G3DSA:3.10.310.10 1 131 3.3E-39 T 22-04-2016 R615_RS03990 e48d5f501ec485547e3444c30448ed80 273 PANTHER PTHR13774:SF17 1 272 2.3E-93 T 22-04-2016 R615_RS03990 e48d5f501ec485547e3444c30448ed80 273 Pfam PF02567 Phenazine biosynthesis-like protein 17 261 5.3E-54 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 PANTHER PTHR30560:SF3 1 431 9.4E-108 T 22-04-2016 R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 PANTHER PTHR30560 1 431 9.4E-108 T 22-04-2016 R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 SUPERFAMILY SSF54534 88 242 9.43E-37 T 22-04-2016 R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 235 1.6E-15 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 SUPERFAMILY SSF102735 1 129 2.88E-34 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 Gene3D G3DSA:3.30.70.1050 1 117 1.3E-32 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 SUPERFAMILY SSF109998 248 430 1.26E-42 T 22-04-2016 IPR027304 Trigger factor/SurA domain R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 Gene3D G3DSA:1.10.3120.10 217 389 2.7E-57 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 Gene3D G3DSA:3.10.50.40 145 216 1.0E-10 T 22-04-2016 R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 PIRSF PIRSF003095 1 432 6.4E-121 T 22-04-2016 IPR005215 Trigger factor GO:0015031 R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 Hamap MF_00303 Trigger factor [tig]. 1 419 20.852 T 22-04-2016 IPR005215 Trigger factor GO:0015031 R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 413 3.5E-32 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 6.1E-37 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 R615_RS08160 3e8b59ffe07cac0f8640b55f06effef0 437 TIGRFAM TIGR00115 tig: trigger factor 11 412 9.6E-136 T 22-04-2016 IPR005215 Trigger factor GO:0015031 R615_RS15215 6c58842cc02e5243b6eb6ccb1fcc7b40 459 PANTHER PTHR30625 24 456 1.1E-84 T 22-04-2016 R615_RS15215 6c58842cc02e5243b6eb6ccb1fcc7b40 459 Pfam PF01618 MotA/TolQ/ExbB proton channel family 324 437 4.5E-28 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 R615_RS15215 6c58842cc02e5243b6eb6ccb1fcc7b40 459 PANTHER PTHR30625:SF0 24 456 1.1E-84 T 22-04-2016 R615_RS15215 6c58842cc02e5243b6eb6ccb1fcc7b40 459 PIRSF PIRSF037714 6 459 6.6E-146 T 22-04-2016 IPR017270 Putative MotA/TolQ/ExbB family protein R615_RS09290 135cf6733b55d3c80c274f8372526e00 161 Pfam PF01575 MaoC like domain 20 113 1.4E-25 T 22-04-2016 IPR002539 MaoC-like domain R615_RS09290 135cf6733b55d3c80c274f8372526e00 161 Gene3D G3DSA:3.10.129.10 9 140 7.4E-49 T 22-04-2016 IPR029069 HotDog domain R615_RS09290 135cf6733b55d3c80c274f8372526e00 161 PRINTS PR01483 Fatty acid synthase signature 26 48 7.8E-6 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 R615_RS09290 135cf6733b55d3c80c274f8372526e00 161 PRINTS PR01483 Fatty acid synthase signature 48 69 7.8E-6 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 R615_RS09290 135cf6733b55d3c80c274f8372526e00 161 PANTHER PTHR13078 6 157 3.1E-41 T 22-04-2016 R615_RS09290 135cf6733b55d3c80c274f8372526e00 161 SUPERFAMILY SSF54637 5 141 1.52E-44 T 22-04-2016 IPR029069 HotDog domain R615_RS07900 579b0b46f5feb815d54f5dfb9559406b 597 Gene3D G3DSA:3.40.50.1820 85 237 7.0E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS07900 579b0b46f5feb815d54f5dfb9559406b 597 Gene3D G3DSA:3.40.50.1820 299 393 7.0E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS07900 579b0b46f5feb815d54f5dfb9559406b 597 PANTHER PTHR34853 1 447 2.6E-63 T 22-04-2016 R615_RS07900 579b0b46f5feb815d54f5dfb9559406b 597 Pfam PF03583 Secretory lipase 129 397 3.6E-48 T 22-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 R615_RS07900 579b0b46f5feb815d54f5dfb9559406b 597 SUPERFAMILY SSF53474 126 395 1.32E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS09210 78505cbeb7e9758f68b14434a62412c5 554 PANTHER PTHR35093:SF2 258 313 1.1E-67 T 22-04-2016 R615_RS09210 78505cbeb7e9758f68b14434a62412c5 554 PANTHER PTHR35093:SF2 329 493 1.1E-67 T 22-04-2016 R615_RS09210 78505cbeb7e9758f68b14434a62412c5 554 PANTHER PTHR35093:SF2 3 122 1.1E-67 T 22-04-2016 R615_RS09210 78505cbeb7e9758f68b14434a62412c5 554 PANTHER PTHR35093:SF2 139 229 1.1E-67 T 22-04-2016 R615_RS09210 78505cbeb7e9758f68b14434a62412c5 554 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 23 554 6.0E-66 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) R615_RS09210 78505cbeb7e9758f68b14434a62412c5 554 PANTHER PTHR35093 258 313 1.1E-67 T 22-04-2016 R615_RS09210 78505cbeb7e9758f68b14434a62412c5 554 PANTHER PTHR35093 329 493 1.1E-67 T 22-04-2016 R615_RS09210 78505cbeb7e9758f68b14434a62412c5 554 PANTHER PTHR35093 3 122 1.1E-67 T 22-04-2016 R615_RS09210 78505cbeb7e9758f68b14434a62412c5 554 PANTHER PTHR35093 139 229 1.1E-67 T 22-04-2016 R615_RS09210 78505cbeb7e9758f68b14434a62412c5 554 SUPERFAMILY SSF56935 34 99 5.19E-43 T 22-04-2016 R615_RS09210 78505cbeb7e9758f68b14434a62412c5 554 SUPERFAMILY SSF56935 131 495 5.19E-43 T 22-04-2016 R615_RS09210 78505cbeb7e9758f68b14434a62412c5 554 Gene3D G3DSA:2.40.160.60 34 554 6.2E-93 T 22-04-2016 R615_RS05410 76a43c4bdfddbffd95410b6994ed44a2 452 PANTHER PTHR32071 1 326 3.1E-32 T 22-04-2016 R615_RS05410 76a43c4bdfddbffd95410b6994ed44a2 452 PANTHER PTHR32071:SF39 1 326 3.1E-32 T 22-04-2016 R615_RS05410 76a43c4bdfddbffd95410b6994ed44a2 452 Pfam PF00072 Response regulator receiver domain 19 129 5.0E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS05410 76a43c4bdfddbffd95410b6994ed44a2 452 SMART SM00448 17 129 8.9E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS05410 76a43c4bdfddbffd95410b6994ed44a2 452 Pfam PF13487 HD domain 263 324 2.1E-17 T 22-04-2016 R615_RS05410 76a43c4bdfddbffd95410b6994ed44a2 452 Gene3D G3DSA:3.40.50.2300 16 137 4.2E-30 T 22-04-2016 R615_RS05410 76a43c4bdfddbffd95410b6994ed44a2 452 SUPERFAMILY SSF52172 17 182 2.28E-32 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS06895 a9d2316cb20b50c0e74d6a5ea2312db2 228 PANTHER PTHR10516 102 222 2.5E-62 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type R615_RS06895 a9d2316cb20b50c0e74d6a5ea2312db2 228 PANTHER PTHR10516 34 83 2.5E-62 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type R615_RS06895 a9d2316cb20b50c0e74d6a5ea2312db2 228 Gene3D G3DSA:1.10.287.460 20 107 2.6E-26 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 R615_RS06895 a9d2316cb20b50c0e74d6a5ea2312db2 228 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 15 124 1.2E-31 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 R615_RS06895 a9d2316cb20b50c0e74d6a5ea2312db2 228 PANTHER PTHR10516:SF320 102 222 2.5E-62 T 22-04-2016 R615_RS06895 a9d2316cb20b50c0e74d6a5ea2312db2 228 PANTHER PTHR10516:SF320 34 83 2.5E-62 T 22-04-2016 R615_RS06895 a9d2316cb20b50c0e74d6a5ea2312db2 228 Gene3D G3DSA:3.10.50.40 108 222 6.2E-45 T 22-04-2016 R615_RS06895 a9d2316cb20b50c0e74d6a5ea2312db2 228 SUPERFAMILY SSF54534 27 222 5.11E-56 T 22-04-2016 R615_RS06895 a9d2316cb20b50c0e74d6a5ea2312db2 228 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 134 220 7.8E-28 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 R615_RS09775 895dc138c52467ee6c2c3bedea44c9b8 388 PANTHER PTHR11815 1 388 1.6E-231 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 R615_RS09775 895dc138c52467ee6c2c3bedea44c9b8 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.438 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 R615_RS09775 895dc138c52467ee6c2c3bedea44c9b8 388 Gene3D G3DSA:3.30.470.20 95 239 9.8E-58 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS09775 895dc138c52467ee6c2c3bedea44c9b8 388 PIRSF PIRSF001554 1 388 1.4E-156 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 R615_RS09775 895dc138c52467ee6c2c3bedea44c9b8 388 Gene3D G3DSA:3.40.50.261 241 383 1.6E-66 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS09775 895dc138c52467ee6c2c3bedea44c9b8 388 SUPERFAMILY SSF56059 1 238 8.44E-83 T 22-04-2016 R615_RS09775 895dc138c52467ee6c2c3bedea44c9b8 388 SUPERFAMILY SSF52210 239 385 9.55E-54 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS09775 895dc138c52467ee6c2c3bedea44c9b8 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS09775 895dc138c52467ee6c2c3bedea44c9b8 388 Gene3D G3DSA:3.30.1490.20 22 94 1.5E-35 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS09775 895dc138c52467ee6c2c3bedea44c9b8 388 Pfam PF00549 CoA-ligase 262 382 7.8E-25 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS09775 895dc138c52467ee6c2c3bedea44c9b8 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.1E-177 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 R615_RS09775 895dc138c52467ee6c2c3bedea44c9b8 388 Pfam PF08442 ATP-grasp domain 2 203 2.7E-82 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS00430 c2db2c33eddc8262dc9abacb2a0a4315 213 PANTHER PTHR36122 9 212 1.4E-56 T 22-04-2016 R615_RS00430 c2db2c33eddc8262dc9abacb2a0a4315 213 Pfam PF04973 Nicotinamide mononucleotide transporter 18 197 2.0E-43 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 R615_RS00430 c2db2c33eddc8262dc9abacb2a0a4315 213 PANTHER PTHR36122:SF1 9 212 1.4E-56 T 22-04-2016 R615_RS00430 c2db2c33eddc8262dc9abacb2a0a4315 213 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 19 201 5.6E-17 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 R615_RS06215 9ffacae4babf69697a67a6eb7a547a94 207 SUPERFAMILY SSF51161 2 206 6.79E-43 T 22-04-2016 IPR011004 Trimeric LpxA-like R615_RS06215 9ffacae4babf69697a67a6eb7a547a94 207 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 3 203 6.5E-64 T 22-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like R615_RS06215 9ffacae4babf69697a67a6eb7a547a94 207 Gene3D G3DSA:2.160.10.10 89 205 6.2E-30 T 22-04-2016 R615_RS06215 9ffacae4babf69697a67a6eb7a547a94 207 PANTHER PTHR23416 83 203 3.5E-23 T 22-04-2016 R615_RS06215 9ffacae4babf69697a67a6eb7a547a94 207 PANTHER PTHR23416:SF23 83 203 3.5E-23 T 22-04-2016 R615_RS06215 9ffacae4babf69697a67a6eb7a547a94 207 Gene3D G3DSA:3.40.50.20 2 84 1.5E-19 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS06215 9ffacae4babf69697a67a6eb7a547a94 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 89 115 4.6E-4 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS06215 9ffacae4babf69697a67a6eb7a547a94 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 153 2.6E-5 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 Gene3D G3DSA:1.10.287.380 907 974 1.7E-6 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 SUPERFAMILY SSF52374 365 577 2.3E-136 T 22-04-2016 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 SUPERFAMILY SSF52374 1 193 2.3E-136 T 22-04-2016 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 SUPERFAMILY SSF52374 615 647 2.3E-136 T 22-04-2016 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 Pfam PF08264 Anticodon-binding domain of tRNA 701 854 9.8E-47 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 SUPERFAMILY SSF47323 648 928 5.61E-71 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 Gene3D G3DSA:1.10.730.10 637 845 3.3E-67 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 Gene3D G3DSA:3.40.50.620 365 577 2.5E-140 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 Gene3D G3DSA:3.40.50.620 3 194 2.5E-140 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 Gene3D G3DSA:3.40.50.620 615 636 2.5E-140 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 960 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 913 974 2.1E-20 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 SUPERFAMILY SSF46589 913 976 4.66E-17 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PANTHER PTHR11946:SF5 690 889 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PANTHER PTHR11946:SF5 909 974 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PANTHER PTHR11946:SF5 614 662 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PANTHER PTHR11946:SF5 1 315 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PANTHER PTHR11946:SF5 334 576 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 SUPERFAMILY SSF50677 191 366 2.22E-57 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 637 1.2E-215 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PANTHER PTHR11946 690 889 0.0 T 22-04-2016 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PANTHER PTHR11946 909 974 0.0 T 22-04-2016 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PANTHER PTHR11946 614 662 0.0 T 22-04-2016 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PANTHER PTHR11946 1 315 0.0 T 22-04-2016 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PANTHER PTHR11946 334 576 0.0 T 22-04-2016 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 978 15.916 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 Gene3D G3DSA:3.90.740.10 195 361 6.9E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PRINTS PR00986 Valyl-tRNA synthetase signature 470 491 3.3E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PRINTS PR00986 Valyl-tRNA synthetase signature 506 524 3.3E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PRINTS PR00986 Valyl-tRNA synthetase signature 370 383 3.3E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 3.3E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 R615_RS10605 4ba27845547e00c7884383c01e1863fe 980 PRINTS PR00986 Valyl-tRNA synthetase signature 237 254 3.3E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 Gene3D G3DSA:3.30.2090.10 715 802 3.1E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 Pfam PF00873 AcrB/AcrD/AcrF family 6 1032 2.5E-230 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 PANTHER PTHR32063:SF19 2 1037 0.0 T 22-04-2016 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 Gene3D G3DSA:1.10.3850.10 276 499 4.1E-65 T 22-04-2016 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 Gene3D G3DSA:1.10.3850.10 806 1036 2.4E-48 T 22-04-2016 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 Gene3D G3DSA:3.30.2090.10 185 269 2.3E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 SUPERFAMILY SSF82866 797 1037 4.19E-42 T 22-04-2016 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 SUPERFAMILY SSF82693 271 328 1.91E-20 T 22-04-2016 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 SUPERFAMILY SSF82693 137 184 1.91E-20 T 22-04-2016 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 SUPERFAMILY SSF82714 185 268 1.83E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1036 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 SUPERFAMILY SSF82714 715 800 1.44E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 Gene3D G3DSA:3.30.70.1430 46 142 4.6E-22 T 22-04-2016 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 SUPERFAMILY SSF82866 294 497 3.79E-41 T 22-04-2016 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 PANTHER PTHR32063 2 1037 0.0 T 22-04-2016 R615_RS02870 d63d2752f220ef778eb89c301481cc1e 1038 SUPERFAMILY SSF82693 46 128 2.88E-18 T 22-04-2016 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 Gene3D G3DSA:1.10.287.990 20 82 8.0E-24 T 22-04-2016 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 PANTHER PTHR11404 1 193 8.0E-107 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 SUPERFAMILY SSF46609 1 84 7.86E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.7E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 4.7E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 4.7E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 4.7E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.7E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 SUPERFAMILY SSF54719 84 192 4.32E-42 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 PIRSF PIRSF000349 1 193 3.2E-84 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 5.2E-37 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 PANTHER PTHR11404:SF8 1 193 8.0E-107 T 22-04-2016 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 R615_RS14055 7090d6c0240c1fa72b2c5271b87b51b0 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 6.7E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 R615_RS13535 5c119a71803a506c0d6c45509847831a 711 Gene3D G3DSA:3.90.226.10 5 197 1.2E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS13535 5c119a71803a506c0d6c45509847831a 711 Gene3D G3DSA:3.90.226.10 230 289 1.2E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS13535 5c119a71803a506c0d6c45509847831a 711 SUPERFAMILY SSF48179 620 711 5.44E-16 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS13535 5c119a71803a506c0d6c45509847831a 711 Gene3D G3DSA:1.10.1040.10 633 708 2.7E-8 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS13535 5c119a71803a506c0d6c45509847831a 711 SUPERFAMILY SSF48179 492 596 2.47E-18 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS13535 5c119a71803a506c0d6c45509847831a 711 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 493 590 1.5E-18 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 R615_RS13535 5c119a71803a506c0d6c45509847831a 711 Gene3D G3DSA:1.10.1040.10 495 591 1.1E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS13535 5c119a71803a506c0d6c45509847831a 711 PANTHER PTHR23309:SF6 2 711 2.2E-277 T 22-04-2016 R615_RS13535 5c119a71803a506c0d6c45509847831a 711 PANTHER PTHR23309 2 711 2.2E-277 T 22-04-2016 R615_RS13535 5c119a71803a506c0d6c45509847831a 711 SUPERFAMILY SSF51735 309 491 1.22E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS13535 5c119a71803a506c0d6c45509847831a 711 Gene3D G3DSA:3.40.50.720 306 494 4.1E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS13535 5c119a71803a506c0d6c45509847831a 711 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 312 490 7.6E-61 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 R615_RS13535 5c119a71803a506c0d6c45509847831a 711 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 197 1.8E-38 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 R615_RS13535 5c119a71803a506c0d6c45509847831a 711 SUPERFAMILY SSF52096 2 303 2.78E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS08855 4ae962899fb31b948e347f15e55eb87d 448 Pfam PF02321 Outer membrane efflux protein 260 428 2.2E-13 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS08855 4ae962899fb31b948e347f15e55eb87d 448 Pfam PF02321 Outer membrane efflux protein 49 230 1.3E-12 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS08855 4ae962899fb31b948e347f15e55eb87d 448 Gene3D G3DSA:1.20.1600.10 46 428 2.6E-39 T 22-04-2016 R615_RS08855 4ae962899fb31b948e347f15e55eb87d 448 SUPERFAMILY SSF56954 21 430 1.57E-59 T 22-04-2016 R615_RS08855 4ae962899fb31b948e347f15e55eb87d 448 PANTHER PTHR30203:SF1 47 448 6.8E-39 T 22-04-2016 R615_RS08855 4ae962899fb31b948e347f15e55eb87d 448 PANTHER PTHR30203 47 448 6.8E-39 T 22-04-2016 R615_RS11655 1f43dc61e1e571a0d19681565bd69237 776 PANTHER PTHR33406 112 762 3.8E-47 T 22-04-2016 R615_RS11655 1f43dc61e1e571a0d19681565bd69237 776 PANTHER PTHR33406 1 94 3.8E-47 T 22-04-2016 R615_RS11655 1f43dc61e1e571a0d19681565bd69237 776 SUPERFAMILY SSF82866 156 376 3.01E-36 T 22-04-2016 R615_RS11655 1f43dc61e1e571a0d19681565bd69237 776 SUPERFAMILY SSF82866 589 763 5.49E-31 T 22-04-2016 R615_RS11655 1f43dc61e1e571a0d19681565bd69237 776 Pfam PF03176 MMPL family 46 381 5.4E-27 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 R615_RS11655 1f43dc61e1e571a0d19681565bd69237 776 Pfam PF03176 MMPL family 445 764 2.2E-13 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 R615_RS11655 1f43dc61e1e571a0d19681565bd69237 776 Gene3D G3DSA:1.20.1640.10 176 382 2.0E-40 T 22-04-2016 R615_RS11655 1f43dc61e1e571a0d19681565bd69237 776 Gene3D G3DSA:1.20.1640.10 593 769 5.0E-30 T 22-04-2016 R615_RS09240 7f190d308ed4cb5cb2c3810bd222e362 241 PANTHER PTHR23293:SF11 3 237 3.7E-99 T 22-04-2016 R615_RS09240 7f190d308ed4cb5cb2c3810bd222e362 241 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 33 208 1.6E-44 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 R615_RS09240 7f190d308ed4cb5cb2c3810bd222e362 241 Gene3D G3DSA:3.40.50.620 4 203 2.5E-50 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS09240 7f190d308ed4cb5cb2c3810bd222e362 241 PANTHER PTHR23293 3 237 3.7E-99 T 22-04-2016 R615_RS09240 7f190d308ed4cb5cb2c3810bd222e362 241 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 37 232 1.5E-78 T 22-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 R615_RS09240 7f190d308ed4cb5cb2c3810bd222e362 241 PIRSF PIRSF000857 1 238 9.1E-76 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 R615_RS09240 7f190d308ed4cb5cb2c3810bd222e362 241 SUPERFAMILY SSF52402 5 196 1.05E-44 T 22-04-2016 R615_RS16295 6819d3ac7770fa6835d6f9b54cd8e19a 438 Pfam PF01554 MatE 2 160 3.3E-23 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS16295 6819d3ac7770fa6835d6f9b54cd8e19a 438 Pfam PF01554 MatE 224 381 1.2E-23 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS16295 6819d3ac7770fa6835d6f9b54cd8e19a 438 PIRSF PIRSF006603 1 423 1.1E-85 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS16295 6819d3ac7770fa6835d6f9b54cd8e19a 438 PANTHER PTHR11206:SF142 1 417 1.9E-93 T 22-04-2016 R615_RS16295 6819d3ac7770fa6835d6f9b54cd8e19a 438 PANTHER PTHR11206 1 417 1.9E-93 T 22-04-2016 R615_RS16295 6819d3ac7770fa6835d6f9b54cd8e19a 438 TIGRFAM TIGR00797 matE: MATE efflux family protein 1 380 1.3E-50 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS01945 987275c78d91c66414ad980754e3e9ee 83 SUPERFAMILY SSF143120 1 81 4.58E-26 T 22-04-2016 R615_RS01945 987275c78d91c66414ad980754e3e9ee 83 PANTHER PTHR33713 1 83 9.1E-28 T 22-04-2016 R615_RS01945 987275c78d91c66414ad980754e3e9ee 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 56 6.4E-12 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM R615_RS01945 987275c78d91c66414ad980754e3e9ee 83 Gene3D G3DSA:3.40.1620.10 2 51 4.9E-9 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM R615_RS01945 987275c78d91c66414ad980754e3e9ee 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 3.9E-24 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM R615_RS01945 987275c78d91c66414ad980754e3e9ee 83 PANTHER PTHR33713:SF6 1 83 9.1E-28 T 22-04-2016 R615_RS00365 945a4e2c8090dc9fa80a85afaeb18bf4 200 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 27 94 6.2E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00365 945a4e2c8090dc9fa80a85afaeb18bf4 200 Gene3D G3DSA:1.10.760.10 31 125 1.9E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00365 945a4e2c8090dc9fa80a85afaeb18bf4 200 SUPERFAMILY SSF46626 16 98 9.6E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00365 945a4e2c8090dc9fa80a85afaeb18bf4 200 PRINTS PR00605 Class IC cytochrome C signature 73 95 5.0E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 R615_RS00365 945a4e2c8090dc9fa80a85afaeb18bf4 200 PRINTS PR00605 Class IC cytochrome C signature 31 42 5.0E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 R615_RS00365 945a4e2c8090dc9fa80a85afaeb18bf4 200 PANTHER PTHR33751:SF3 1 200 8.4E-60 T 22-04-2016 R615_RS00365 945a4e2c8090dc9fa80a85afaeb18bf4 200 SUPERFAMILY SSF46626 108 198 1.77E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00365 945a4e2c8090dc9fa80a85afaeb18bf4 200 Gene3D G3DSA:1.10.760.10 126 199 2.2E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00365 945a4e2c8090dc9fa80a85afaeb18bf4 200 Pfam PF00034 Cytochrome c 120 199 2.6E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00365 945a4e2c8090dc9fa80a85afaeb18bf4 200 PIRSF PIRSF000005 1 200 3.3E-62 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 R615_RS00365 945a4e2c8090dc9fa80a85afaeb18bf4 200 PANTHER PTHR33751 1 200 8.4E-60 T 22-04-2016 R615_RS14485 7efc8f5cb1cb4738b5140f5a82b556f4 216 Gene3D G3DSA:2.40.30.20 5 104 2.7E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS14485 7efc8f5cb1cb4738b5140f5a82b556f4 216 Gene3D G3DSA:2.40.30.20 105 194 1.0E-28 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS14485 7efc8f5cb1cb4738b5140f5a82b556f4 216 PIRSF PIRSF000498 1 209 1.0E-72 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14485 7efc8f5cb1cb4738b5140f5a82b556f4 216 SUPERFAMILY SSF63380 2 89 1.11E-23 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 R615_RS14485 7efc8f5cb1cb4738b5140f5a82b556f4 216 PANTHER PTHR21098 2 216 8.5E-89 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14485 7efc8f5cb1cb4738b5140f5a82b556f4 216 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 2 198 1.8E-58 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14485 7efc8f5cb1cb4738b5140f5a82b556f4 216 SUPERFAMILY SSF63380 93 196 3.66E-29 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 R615_RS14485 7efc8f5cb1cb4738b5140f5a82b556f4 216 Pfam PF00677 Lumazine binding domain 100 184 6.9E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14485 7efc8f5cb1cb4738b5140f5a82b556f4 216 Pfam PF00677 Lumazine binding domain 3 87 2.1E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14400 4169505ec3c838c45fda182262222148 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 255 6.7E-18 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain R615_RS14400 4169505ec3c838c45fda182262222148 366 Gene3D G3DSA:2.40.50.100 177 208 2.6E-12 T 22-04-2016 R615_RS14400 4169505ec3c838c45fda182262222148 366 Gene3D G3DSA:2.40.50.100 72 102 2.6E-12 T 22-04-2016 R615_RS14400 4169505ec3c838c45fda182262222148 366 SUPERFAMILY SSF111369 60 284 1.29E-12 T 22-04-2016 R615_RS14400 4169505ec3c838c45fda182262222148 366 PANTHER PTHR30469 42 365 6.3E-48 T 22-04-2016 R615_RS14400 4169505ec3c838c45fda182262222148 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 364 1.2E-50 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 R615_RS08710 4529752fac62b0af4587035492acd888 117 SMART SM00938 6 100 6.7E-6 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS08710 4529752fac62b0af4587035492acd888 117 Pfam PF00543 Nitrogen regulatory protein P-II 6 95 6.8E-8 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS08710 4529752fac62b0af4587035492acd888 117 Gene3D G3DSA:3.30.70.120 5 99 9.0E-13 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal R615_RS08710 4529752fac62b0af4587035492acd888 117 SUPERFAMILY SSF54913 5 100 3.81E-16 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 Gene3D G3DSA:3.20.20.330 14 370 6.3E-120 T 22-04-2016 IPR003726 Homocysteine-binding domain R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 SUPERFAMILY SSF51717 363 637 2.49E-86 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 Gene3D G3DSA:3.20.20.20 371 643 1.7E-110 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 PIRSF PIRSF000381 9 1202 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 SUPERFAMILY SSF52242 749 901 3.66E-44 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 SMART SM01018 662 745 5.3E-44 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 Gene3D G3DSA:3.40.50.280 751 900 1.0E-61 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 SUPERFAMILY SSF56507 908 1232 1.31E-127 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 PANTHER PTHR21091:SF111 1 409 5.9E-165 T 22-04-2016 R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 Gene3D G3DSA:3.10.196.10 964 1232 2.7E-109 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 Pfam PF02607 B12 binding domain 664 737 1.6E-23 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 Gene3D G3DSA:1.10.1240.10 655 742 1.7E-37 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 SUPERFAMILY SSF82282 18 406 5.62E-113 T 22-04-2016 IPR003726 Homocysteine-binding domain R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 TIGRFAM TIGR02082 metH: methionine synthase 22 1198 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 Pfam PF02310 B12 binding domain 754 846 1.3E-19 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 SUPERFAMILY SSF47644 657 744 6.02E-29 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 Pfam PF00809 Pterin binding enzyme 367 605 2.9E-58 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 Pfam PF02574 Homocysteine S-methyltransferase 26 332 3.2E-86 T 22-04-2016 IPR003726 Homocysteine-binding domain R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 PANTHER PTHR21091 1 409 5.9E-165 T 22-04-2016 R615_RS08280 7ca031c7f9406901ffc2a13855aa2f39 1233 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 944 1215 5.1E-123 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 R615_RS12740 06432c57428f5b2fa3968e0ecaff843c 261 Pfam PF01841 Transglutaminase-like superfamily 138 213 7.5E-14 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS12740 06432c57428f5b2fa3968e0ecaff843c 261 SUPERFAMILY SSF54001 6 241 3.5E-26 T 22-04-2016 R615_RS12740 06432c57428f5b2fa3968e0ecaff843c 261 Gene3D G3DSA:3.90.260.10 167 245 4.1E-5 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS12740 06432c57428f5b2fa3968e0ecaff843c 261 PANTHER PTHR33490:SF5 1 253 1.5E-51 T 22-04-2016 R615_RS12740 06432c57428f5b2fa3968e0ecaff843c 261 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 1.2E-18 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal R615_RS12740 06432c57428f5b2fa3968e0ecaff843c 261 SMART SM00460 154 216 6.9E-7 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS12740 06432c57428f5b2fa3968e0ecaff843c 261 PANTHER PTHR33490 1 253 1.5E-51 T 22-04-2016 R615_RS02295 5f72ccfcfbb9d523ad04818a91a7691b 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 1.4E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS02295 5f72ccfcfbb9d523ad04818a91a7691b 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 1.4E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS02295 5f72ccfcfbb9d523ad04818a91a7691b 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 1.4E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS02295 5f72ccfcfbb9d523ad04818a91a7691b 226 PANTHER PTHR26402 106 226 1.5E-18 T 22-04-2016 R615_RS02295 5f72ccfcfbb9d523ad04818a91a7691b 226 SUPERFAMILY SSF46894 149 215 2.89E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS02295 5f72ccfcfbb9d523ad04818a91a7691b 226 PANTHER PTHR26402:SF151 106 226 1.5E-18 T 22-04-2016 R615_RS02295 5f72ccfcfbb9d523ad04818a91a7691b 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 213 7.1E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS02295 5f72ccfcfbb9d523ad04818a91a7691b 226 SMART SM00421 156 213 1.2E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS02295 5f72ccfcfbb9d523ad04818a91a7691b 226 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS02295 5f72ccfcfbb9d523ad04818a91a7691b 226 Gene3D G3DSA:1.10.10.10 136 216 2.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS04065 52c7fb9a9f4413a592b875ff9af8dc9c 81 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 81 27.325 T 22-04-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 R615_RS04065 52c7fb9a9f4413a592b875ff9af8dc9c 81 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 77 3.6E-16 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 R615_RS04065 52c7fb9a9f4413a592b875ff9af8dc9c 81 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 6 80 1.7E-16 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 R615_RS15805 192388144822fd3f9e848c27f3c3fd6c 130 PANTHER PTHR11758 1 130 1.8E-52 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 R615_RS15805 192388144822fd3f9e848c27f3c3fd6c 130 Gene3D G3DSA:3.30.1370.30 2 71 1.3E-26 T 22-04-2016 R615_RS15805 192388144822fd3f9e848c27f3c3fd6c 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.435 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 R615_RS15805 192388144822fd3f9e848c27f3c3fd6c 130 Gene3D G3DSA:3.30.1490.10 74 130 1.0E-25 T 22-04-2016 R615_RS15805 192388144822fd3f9e848c27f3c3fd6c 130 Pfam PF00410 Ribosomal protein S8 5 130 1.4E-47 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 R615_RS15805 192388144822fd3f9e848c27f3c3fd6c 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 R615_RS15805 192388144822fd3f9e848c27f3c3fd6c 130 SUPERFAMILY SSF56047 5 130 9.81E-44 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 R615_RS12755 56fd27f00d04e07175850b7e8d078d9b 344 Gene3D G3DSA:3.40.640.10 66 255 2.9E-40 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS12755 56fd27f00d04e07175850b7e8d078d9b 344 PANTHER PTHR11751 6 343 7.1E-34 T 22-04-2016 R615_RS12755 56fd27f00d04e07175850b7e8d078d9b 344 Pfam PF00155 Aminotransferase class I and II 69 327 3.5E-28 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 R615_RS12755 56fd27f00d04e07175850b7e8d078d9b 344 SUPERFAMILY SSF53383 28 340 4.83E-46 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS12755 56fd27f00d04e07175850b7e8d078d9b 344 PANTHER PTHR11751:SF3 6 343 7.1E-34 T 22-04-2016 R615_RS05765 be53ea42bb1272d5b5e5bbe2008b7bfe 346 Pfam PF01168 Alanine racemase, N-terminal domain 48 195 3.3E-18 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS05765 be53ea42bb1272d5b5e5bbe2008b7bfe 346 SUPERFAMILY SSF51419 39 198 6.67E-17 T 22-04-2016 IPR029066 PLP-binding barrel R615_RS05765 be53ea42bb1272d5b5e5bbe2008b7bfe 346 Gene3D G3DSA:3.20.20.10 9 125 3.0E-11 T 22-04-2016 IPR029066 PLP-binding barrel R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 PANTHER PTHR32071:SF21 1 454 3.3E-219 T 22-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 SUPERFAMILY SSF52172 3 174 1.11E-45 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 Pfam PF00158 Sigma-54 interaction domain 133 296 1.2E-68 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 PANTHER PTHR32071 1 454 3.3E-219 T 22-04-2016 R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 154 167 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 SUPERFAMILY SSF46689 343 440 8.96E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 Gene3D G3DSA:1.10.8.60 303 375 5.2E-22 T 22-04-2016 R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 SUPERFAMILY SSF52540 138 371 1.22E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 Pfam PF02954 Bacterial regulatory protein, Fis family 401 439 1.3E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 Pfam PF00072 Response regulator receiver domain 6 113 4.0E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 Gene3D G3DSA:1.10.10.60 397 437 7.5E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 Gene3D G3DSA:3.40.50.300 129 302 6.7E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 SMART SM00448 3 114 3.4E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 Gene3D G3DSA:3.40.50.2300 3 121 2.2E-38 T 22-04-2016 R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 343 352 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site R615_RS04955 5528642d00183eb54bfdfcffcaf8ba22 454 SMART SM00382 150 293 9.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 Gene3D G3DSA:2.40.50.180 568 632 1.3E-12 T 22-04-2016 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 SUPERFAMILY SSF47384 297 360 1.69E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 SMART SM00260 537 677 3.6E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 PANTHER PTHR22617 1 693 1.9E-239 T 22-04-2016 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 PANTHER PTHR22617:SF20 1 693 1.9E-239 T 22-04-2016 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 542 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 463 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 523 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 499 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 Gene3D G3DSA:2.30.30.40 545 566 5.2E-22 T 22-04-2016 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 Gene3D G3DSA:2.30.30.40 633 676 5.2E-22 T 22-04-2016 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 SMART SM00073 5 102 2.8E-26 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 Pfam PF01584 CheW-like domain 552 676 9.1E-25 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 SMART SM00387 404 545 9.0E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 296 359 2.2E-18 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 Gene3D G3DSA:3.30.565.10 363 544 6.1E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 SMART SM01231 296 359 6.3E-22 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 SUPERFAMILY SSF47226 5 127 9.07E-31 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 Pfam PF01627 Hpt domain 9 107 1.2E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 SUPERFAMILY SSF50341 544 676 5.1E-29 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 Gene3D G3DSA:1.20.120.160 4 137 2.0E-37 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 407 544 1.2E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 Gene3D G3DSA:1.10.287.560 296 360 8.1E-23 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 R615_RS05000 191c089a1e90c8d46d6c3e42beadbf28 694 SUPERFAMILY SSF55874 363 543 1.44E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS06000 8acfa5bd9ae2af31d1fac40335a203c6 221 Pfam PF08239 Bacterial SH3 domain 32 83 2.4E-10 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type R615_RS06000 8acfa5bd9ae2af31d1fac40335a203c6 221 PIRSF PIRSF006158 1 221 1.0E-45 T 22-04-2016 IPR016476 SH3 domain protein R615_RS06000 8acfa5bd9ae2af31d1fac40335a203c6 221 SMART SM00287 20 86 9.1E-6 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type R615_RS06000 8acfa5bd9ae2af31d1fac40335a203c6 221 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 220 8.1E-59 T 22-04-2016 IPR016476 SH3 domain protein R615_RS01680 16d9a88568201ce51b6823e787a3b956 417 Pfam PF06812 ImpA, N-terminal, type VI secretion system 14 141 8.0E-34 T 22-04-2016 IPR010657 ImpA, N-terminal R615_RS01680 16d9a88568201ce51b6823e787a3b956 417 PANTHER PTHR37951 1 374 4.4E-37 T 22-04-2016 R615_RS01680 16d9a88568201ce51b6823e787a3b956 417 PANTHER PTHR37951:SF1 1 374 4.4E-37 T 22-04-2016 R615_RS01680 16d9a88568201ce51b6823e787a3b956 417 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 7 371 6.0E-84 T 22-04-2016 IPR017740 Type VI secretion system-associated, ImpA R615_RS12420 6395cab89db1e4eb197561a7cd6403f7 257 Gene3D G3DSA:3.30.540.10 2 156 2.0E-21 T 22-04-2016 R615_RS12420 6395cab89db1e4eb197561a7cd6403f7 257 Pfam PF00459 Inositol monophosphatase family 1 253 9.3E-27 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS12420 6395cab89db1e4eb197561a7cd6403f7 257 PANTHER PTHR20854:SF4 1 256 2.0E-31 T 22-04-2016 R615_RS12420 6395cab89db1e4eb197561a7cd6403f7 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 9.5E-25 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS12420 6395cab89db1e4eb197561a7cd6403f7 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 9.5E-25 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS12420 6395cab89db1e4eb197561a7cd6403f7 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 9.5E-25 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS12420 6395cab89db1e4eb197561a7cd6403f7 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 9.5E-25 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS12420 6395cab89db1e4eb197561a7cd6403f7 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 9.5E-25 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS12420 6395cab89db1e4eb197561a7cd6403f7 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 9.5E-25 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS12420 6395cab89db1e4eb197561a7cd6403f7 257 PANTHER PTHR20854 1 256 2.0E-31 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS12420 6395cab89db1e4eb197561a7cd6403f7 257 Gene3D G3DSA:3.40.190.80 168 255 4.1E-15 T 22-04-2016 R615_RS12420 6395cab89db1e4eb197561a7cd6403f7 257 SUPERFAMILY SSF56655 1 255 2.23E-39 T 22-04-2016 R615_RS07110 b1da03261d0b4611b0fc19d9e9dc838d 444 PANTHER PTHR37839 1 444 6.2E-204 T 22-04-2016 R615_RS07110 b1da03261d0b4611b0fc19d9e9dc838d 444 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 444 46.136 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 R615_RS07110 b1da03261d0b4611b0fc19d9e9dc838d 444 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 444 1.5E-176 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 R615_RS07110 b1da03261d0b4611b0fc19d9e9dc838d 444 Pfam PF11973 NQRA C-terminal domain 260 309 1.1E-21 T 22-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 R615_RS07110 b1da03261d0b4611b0fc19d9e9dc838d 444 PANTHER PTHR37839:SF1 1 444 6.2E-204 T 22-04-2016 R615_RS07110 b1da03261d0b4611b0fc19d9e9dc838d 444 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 255 3.7E-111 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 R615_RS07110 b1da03261d0b4611b0fc19d9e9dc838d 444 Gene3D G3DSA:2.40.50.100 42 80 8.6E-5 T 22-04-2016 R615_RS10955 b371784766c2d2c5b50ef805804bc1dc 374 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site R615_RS10955 b371784766c2d2c5b50ef805804bc1dc 374 Gene3D G3DSA:3.40.50.150 158 367 2.0E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS10955 b371784766c2d2c5b50ef805804bc1dc 374 PANTHER PTHR11061 12 372 9.4E-167 T 22-04-2016 R615_RS10955 b371784766c2d2c5b50ef805804bc1dc 374 SUPERFAMILY SSF53335 17 367 1.79E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS10955 b371784766c2d2c5b50ef805804bc1dc 374 PANTHER PTHR11061:SF25 12 372 9.4E-167 T 22-04-2016 R615_RS10955 b371784766c2d2c5b50ef805804bc1dc 374 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site R615_RS10955 b371784766c2d2c5b50ef805804bc1dc 374 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 10 368 42.143 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 R615_RS10955 b371784766c2d2c5b50ef805804bc1dc 374 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 17 368 2.1E-161 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 R615_RS10955 b371784766c2d2c5b50ef805804bc1dc 374 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 17 368 2.4E-160 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 R615_RS02415 23222b5d2667db557364b62ebcada17f 356 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 14 323 49.606 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS02415 23222b5d2667db557364b62ebcada17f 356 SUPERFAMILY SSF54862 197 325 2.68E-15 T 22-04-2016 R615_RS02415 23222b5d2667db557364b62ebcada17f 356 PANTHER PTHR30002:SF4 9 355 6.4E-178 T 22-04-2016 R615_RS02415 23222b5d2667db557364b62ebcada17f 356 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 201 212 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site R615_RS02415 23222b5d2667db557364b62ebcada17f 356 Gene3D G3DSA:3.30.70.20 198 267 4.3E-6 T 22-04-2016 R615_RS02415 23222b5d2667db557364b62ebcada17f 356 Pfam PF08331 Domain of unknown function (DUF1730) 69 147 5.0E-24 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS02415 23222b5d2667db557364b62ebcada17f 356 PANTHER PTHR30002 9 355 6.4E-178 T 22-04-2016 R615_RS02415 23222b5d2667db557364b62ebcada17f 356 Pfam PF13484 4Fe-4S double cluster binding domain 200 264 4.4E-18 T 22-04-2016 R615_RS02415 23222b5d2667db557364b62ebcada17f 356 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 21 355 8.9E-150 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS17295 225dba6d0f179dd1eea6a5edbd85bb44 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.4E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS17295 225dba6d0f179dd1eea6a5edbd85bb44 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.4E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS17295 225dba6d0f179dd1eea6a5edbd85bb44 193 SUPERFAMILY SSF46689 2 70 9.75E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS17295 225dba6d0f179dd1eea6a5edbd85bb44 193 Gene3D G3DSA:1.10.10.60 1 56 1.0E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS17295 225dba6d0f179dd1eea6a5edbd85bb44 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 3.1E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS17295 225dba6d0f179dd1eea6a5edbd85bb44 193 SUPERFAMILY SSF48498 79 189 2.91E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal R615_RS17295 225dba6d0f179dd1eea6a5edbd85bb44 193 PANTHER PTHR30055:SF44 1 163 2.5E-31 T 22-04-2016 R615_RS17295 225dba6d0f179dd1eea6a5edbd85bb44 193 Gene3D G3DSA:1.10.357.10 57 181 7.3E-10 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS17295 225dba6d0f179dd1eea6a5edbd85bb44 193 PANTHER PTHR30055 1 163 2.5E-31 T 22-04-2016 R615_RS16580 d93e6746f082cc20c56d9ebc608cf850 438 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 128 1.3E-35 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 R615_RS16580 d93e6746f082cc20c56d9ebc608cf850 438 SUPERFAMILY SSF53092 4 176 4.19E-54 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal R615_RS16580 d93e6746f082cc20c56d9ebc608cf850 438 SMART SM01011 4 138 2.3E-63 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 R615_RS16580 d93e6746f082cc20c56d9ebc608cf850 438 Gene3D G3DSA:3.40.350.10 5 180 9.8E-55 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal R615_RS16580 d93e6746f082cc20c56d9ebc608cf850 438 Gene3D G3DSA:3.90.230.10 181 430 1.6E-85 T 22-04-2016 IPR000994 Peptidase M24, structural domain R615_RS16580 d93e6746f082cc20c56d9ebc608cf850 438 SUPERFAMILY SSF55920 177 434 7.72E-83 T 22-04-2016 IPR000994 Peptidase M24, structural domain R615_RS16580 d93e6746f082cc20c56d9ebc608cf850 438 PANTHER PTHR10804 7 437 2.8E-157 T 22-04-2016 R615_RS16580 d93e6746f082cc20c56d9ebc608cf850 438 PANTHER PTHR10804:SF17 7 437 2.8E-157 T 22-04-2016 R615_RS16580 d93e6746f082cc20c56d9ebc608cf850 438 Pfam PF00557 Metallopeptidase family M24 184 415 7.7E-66 T 22-04-2016 IPR000994 Peptidase M24, structural domain R615_RS17330 0bad268651efa2926a2be2830888810c 285 SMART SM00260 143 277 5.9E-5 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS17330 0bad268651efa2926a2be2830888810c 285 SUPERFAMILY SSF50341 144 280 1.02E-12 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS17330 0bad268651efa2926a2be2830888810c 285 Pfam PF01584 CheW-like domain 147 279 4.2E-11 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS17330 0bad268651efa2926a2be2830888810c 285 PIRSF PIRSF020479 2 283 1.3E-51 T 22-04-2016 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 SUPERFAMILY SSF52540 74 352 5.69E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 55.224 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 5 70 3.1E-20 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 Gene3D G3DSA:2.40.10.170 2 72 1.5E-27 T 22-04-2016 R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 127 346 1.9E-62 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 PANTHER PTHR15184:SF44 1 464 0.0 T 22-04-2016 R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 SUPERFAMILY SSF47917 349 463 3.4E-53 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 PANTHER PTHR15184 1 464 0.0 T 22-04-2016 R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 2 464 1.9E-249 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 SMART SM00382 139 409 0.0014 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 SUPERFAMILY SSF50615 2 72 1.12E-24 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 Gene3D G3DSA:3.40.50.300 73 347 3.1E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16950 1930fc9ceebc6c48d5241affd8fe746a 464 Gene3D G3DSA:1.10.1140.10 349 464 7.3E-55 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS14740 8ce3f82843346443b65cecb73207f3a8 355 PANTHER PTHR30566:SF5 13 346 2.2E-83 T 22-04-2016 R615_RS14740 8ce3f82843346443b65cecb73207f3a8 355 SUPERFAMILY SSF82689 246 346 2.48E-20 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 R615_RS14740 8ce3f82843346443b65cecb73207f3a8 355 PANTHER PTHR30566 13 346 2.2E-83 T 22-04-2016 R615_RS14740 8ce3f82843346443b65cecb73207f3a8 355 Gene3D G3DSA:3.30.70.100 246 332 9.6E-14 T 22-04-2016 R615_RS14740 8ce3f82843346443b65cecb73207f3a8 355 SUPERFAMILY SSF82861 97 173 3.01E-10 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 R615_RS14740 8ce3f82843346443b65cecb73207f3a8 355 SUPERFAMILY SSF50182 174 241 3.11E-16 T 22-04-2016 IPR010920 LSM domain R615_RS14740 8ce3f82843346443b65cecb73207f3a8 355 Pfam PF00924 Mechanosensitive ion channel 132 334 8.0E-55 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 R615_RS14740 8ce3f82843346443b65cecb73207f3a8 355 Gene3D G3DSA:2.30.30.60 190 240 1.1E-16 T 22-04-2016 R615_RS14740 8ce3f82843346443b65cecb73207f3a8 355 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 206 240 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 R615_RS17460 021546ba7ecb7d21ed8234c5bab224b2 406 PANTHER PTHR10799:SF750 126 385 9.7E-18 T 22-04-2016 R615_RS17460 021546ba7ecb7d21ed8234c5bab224b2 406 PANTHER PTHR10799 126 385 9.7E-18 T 22-04-2016 R615_RS17460 021546ba7ecb7d21ed8234c5bab224b2 406 SUPERFAMILY SSF55073 231 391 8.63E-41 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS17460 021546ba7ecb7d21ed8234c5bab224b2 406 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 223 388 2.3E-39 T 22-04-2016 IPR000160 GGDEF domain R615_RS17460 021546ba7ecb7d21ed8234c5bab224b2 406 Gene3D G3DSA:3.30.70.270 228 395 4.3E-46 T 22-04-2016 R615_RS17460 021546ba7ecb7d21ed8234c5bab224b2 406 SMART SM00267 215 392 2.3E-45 T 22-04-2016 IPR000160 GGDEF domain R615_RS17460 021546ba7ecb7d21ed8234c5bab224b2 406 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 386 1.0E-35 T 22-04-2016 IPR000160 GGDEF domain R615_RS16740 143aabb13ef0d3595c862baf1b163faa 244 PIRSF PIRSF009320 18 243 4.6E-26 T 22-04-2016 R615_RS16740 143aabb13ef0d3595c862baf1b163faa 244 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 20 178 7.2E-20 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain R615_RS16740 143aabb13ef0d3595c862baf1b163faa 244 SUPERFAMILY SSF52540 18 234 3.01E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16740 143aabb13ef0d3595c862baf1b163faa 244 PANTHER PTHR13696 20 241 7.6E-23 T 22-04-2016 R615_RS16740 143aabb13ef0d3595c862baf1b163faa 244 Gene3D G3DSA:3.40.50.300 20 235 2.9E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16740 143aabb13ef0d3595c862baf1b163faa 244 PANTHER PTHR13696:SF66 20 241 7.6E-23 T 22-04-2016 R615_RS08580 62de6ec45240682e7011f03f4028e6dc 172 Pfam PF06938 Protein of unknown function (DUF1285) 35 156 4.2E-35 T 22-04-2016 IPR010707 Protein of unknown function DUF1285 R615_RS08580 62de6ec45240682e7011f03f4028e6dc 172 PIRSF PIRSF029557 2 169 8.5E-42 T 22-04-2016 IPR010707 Protein of unknown function DUF1285 R615_RS08580 62de6ec45240682e7011f03f4028e6dc 172 Gene3D G3DSA:3.10.540.10 13 85 8.4E-33 T 22-04-2016 R615_RS08580 62de6ec45240682e7011f03f4028e6dc 172 Gene3D G3DSA:2.30.270.10 87 148 1.8E-8 T 22-04-2016 IPR023361 Protein of unknown function DUF1285, beta-roll domain R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 SUPERFAMILY SSF54211 10 169 3.07E-29 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 Gene3D G3DSA:3.30.230.10 6 149 8.1E-26 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 3.0E-46 T 22-04-2016 R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 PANTHER PTHR32039:SF7 1 501 2.8E-256 T 22-04-2016 IPR004482 Mg chelatase-related protein R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 SUPERFAMILY SSF52540 191 503 1.29E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 496 2.3E-198 T 22-04-2016 IPR004482 Mg chelatase-related protein R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 PANTHER PTHR32039 1 501 2.8E-256 T 22-04-2016 R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 Gene3D G3DSA:3.40.50.300 191 391 1.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 210 225 6.3E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 319 332 6.3E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 343 355 6.3E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 291 305 6.3E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 SMART SM00382 211 394 5.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 394 4.9E-96 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain R615_RS00235 b39c477fbb3ea6ecc4f2dca7c52d13ef 505 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 405 496 4.1E-29 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain R615_RS10560 583a6e9e38c4bcd12de43efb91d94efe 788 PANTHER PTHR33406 111 787 7.1E-61 T 22-04-2016 R615_RS10560 583a6e9e38c4bcd12de43efb91d94efe 788 PANTHER PTHR33406 5 94 7.1E-61 T 22-04-2016 R615_RS10560 583a6e9e38c4bcd12de43efb91d94efe 788 SUPERFAMILY SSF82866 567 757 1.57E-32 T 22-04-2016 R615_RS10560 583a6e9e38c4bcd12de43efb91d94efe 788 Gene3D G3DSA:1.20.1640.10 562 762 8.2E-31 T 22-04-2016 R615_RS10560 583a6e9e38c4bcd12de43efb91d94efe 788 Gene3D G3DSA:1.20.1640.10 180 374 1.4E-33 T 22-04-2016 R615_RS10560 583a6e9e38c4bcd12de43efb91d94efe 788 Pfam PF03176 MMPL family 570 755 3.2E-14 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 R615_RS10560 583a6e9e38c4bcd12de43efb91d94efe 788 Pfam PF03176 MMPL family 128 374 4.3E-24 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 R615_RS10560 583a6e9e38c4bcd12de43efb91d94efe 788 PANTHER PTHR33406:SF2 111 787 7.1E-61 T 22-04-2016 R615_RS10560 583a6e9e38c4bcd12de43efb91d94efe 788 PANTHER PTHR33406:SF2 5 94 7.1E-61 T 22-04-2016 R615_RS10560 583a6e9e38c4bcd12de43efb91d94efe 788 SUPERFAMILY SSF82866 183 374 1.83E-33 T 22-04-2016 R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 SUPERFAMILY SSF54631 138 277 4.04E-29 T 22-04-2016 R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 SMART SM00924 35 138 6.7E-37 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 SMART SM00116 209 257 2.3E-4 T 22-04-2016 IPR000644 CBS domain R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 SMART SM00116 145 198 69.0 T 22-04-2016 IPR000644 CBS domain R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 SUPERFAMILY SSF161093 280 450 4.18E-46 T 22-04-2016 R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 PANTHER PTHR11911:SF99 54 421 9.7E-68 T 22-04-2016 R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 Gene3D G3DSA:3.10.580.10 130 259 1.3E-19 T 22-04-2016 R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 Pfam PF00571 CBS domain 202 256 9.5E-5 T 22-04-2016 IPR000644 CBS domain R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 Pfam PF00571 CBS domain 139 194 3.9E-5 T 22-04-2016 IPR000644 CBS domain R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 18 449 1.5E-90 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 Gene3D G3DSA:1.25.60.10 6 129 8.8E-27 T 22-04-2016 R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 Pfam PF01769 Divalent cation transporter 322 444 3.6E-22 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 PANTHER PTHR11911 54 421 9.7E-68 T 22-04-2016 R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 Pfam PF03448 MgtE intracellular N domain 36 136 1.1E-26 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 Gene3D G3DSA:1.10.357.20 279 450 2.2E-48 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 R615_RS02055 900bc2e3a215d2f2567610dab80226c9 451 SUPERFAMILY SSF158791 12 135 6.15E-29 T 22-04-2016 R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 Pfam PF03466 LysR substrate binding domain 97 307 2.1E-19 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 PANTHER PTHR30118 1 309 3.9E-86 T 22-04-2016 R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 PANTHER PTHR30118:SF8 1 309 3.9E-86 T 22-04-2016 R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 6.6E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 Gene3D G3DSA:3.40.190.10 283 310 8.3E-30 T 22-04-2016 R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 Gene3D G3DSA:3.40.190.10 90 171 8.3E-30 T 22-04-2016 R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 Gene3D G3DSA:3.40.190.10 172 279 5.1E-25 T 22-04-2016 R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 SUPERFAMILY SSF53850 90 307 1.47E-39 T 22-04-2016 R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 Gene3D G3DSA:1.10.10.10 1 87 1.6E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 SUPERFAMILY SSF46785 2 87 1.23E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS05535 db88ca63dfe3a9a9295dadb879942e50 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS00810 1ad8f4d6394cb5258042fbe183c5255a 167 Pfam PF07209 Protein of unknown function (DUF1415) 2 155 1.9E-48 T 22-04-2016 IPR009858 Protein of unknown function DUF1415 R615_RS08080 b2a9a2f48eb92686efb50169b1d482c2 241 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 99.38 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 R615_RS08080 b2a9a2f48eb92686efb50169b1d482c2 241 SUPERFAMILY SSF56300 1 224 1.22E-22 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS08080 b2a9a2f48eb92686efb50169b1d482c2 241 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 232 1.6E-78 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 R615_RS08080 b2a9a2f48eb92686efb50169b1d482c2 241 Pfam PF00149 Calcineurin-like phosphoesterase 3 198 2.4E-6 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 R615_RS08080 b2a9a2f48eb92686efb50169b1d482c2 241 Gene3D G3DSA:3.60.21.10 172 206 6.7E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS08080 b2a9a2f48eb92686efb50169b1d482c2 241 Gene3D G3DSA:3.60.21.10 1 124 6.7E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS08080 b2a9a2f48eb92686efb50169b1d482c2 241 PANTHER PTHR34990 1 241 4.8E-77 T 22-04-2016 R615_RS08080 b2a9a2f48eb92686efb50169b1d482c2 241 PANTHER PTHR34990:SF1 1 241 4.8E-77 T 22-04-2016 R615_RS16450 964d183215adaa68dba14647eeaff087 596 Gene3D G3DSA:3.40.50.300 318 588 3.4E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16450 964d183215adaa68dba14647eeaff087 596 PANTHER PTHR30258 3 595 3.5E-254 T 22-04-2016 R615_RS16450 964d183215adaa68dba14647eeaff087 596 SUPERFAMILY SSF160246 10 160 1.73E-11 T 22-04-2016 R615_RS16450 964d183215adaa68dba14647eeaff087 596 SMART SM00382 340 461 0.0026 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS16450 964d183215adaa68dba14647eeaff087 596 PANTHER PTHR30258:SF13 3 595 3.5E-254 T 22-04-2016 R615_RS16450 964d183215adaa68dba14647eeaff087 596 Gene3D G3DSA:3.30.450.90 184 312 2.4E-44 T 22-04-2016 R615_RS16450 964d183215adaa68dba14647eeaff087 596 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 67 167 6.1E-14 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 R615_RS16450 964d183215adaa68dba14647eeaff087 596 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 407 421 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 R615_RS16450 964d183215adaa68dba14647eeaff087 596 Pfam PF00437 Type II/IV secretion system protein 217 479 8.0E-72 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 R615_RS16450 964d183215adaa68dba14647eeaff087 596 SUPERFAMILY SSF52540 201 586 1.38E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13065 3b01b286384c86a64ceb4df8b627cb73 139 Pfam PF00293 NUDIX domain 5 125 3.2E-21 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 R615_RS13065 3b01b286384c86a64ceb4df8b627cb73 139 Gene3D G3DSA:3.90.79.10 3 133 4.3E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS13065 3b01b286384c86a64ceb4df8b627cb73 139 SUPERFAMILY SSF55811 4 130 1.14E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS13065 3b01b286384c86a64ceb4df8b627cb73 139 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-6 T 22-04-2016 IPR020476 NUDIX hydrolase R615_RS13065 3b01b286384c86a64ceb4df8b627cb73 139 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-6 T 22-04-2016 IPR020476 NUDIX hydrolase R615_RS13065 3b01b286384c86a64ceb4df8b627cb73 139 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 132 4.1E-31 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 R615_RS13065 3b01b286384c86a64ceb4df8b627cb73 139 PANTHER PTHR22769 1 136 3.9E-33 T 22-04-2016 R615_RS13065 3b01b286384c86a64ceb4df8b627cb73 139 PANTHER PTHR22769:SF35 1 136 3.9E-33 T 22-04-2016 R615_RS04010 8abbea1114c43f12d7dad939981fcb4e 792 SUPERFAMILY SSF52518 75 355 1.85E-19 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS04010 8abbea1114c43f12d7dad939981fcb4e 792 SUPERFAMILY SSF52518 410 601 5.0E-6 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS04010 8abbea1114c43f12d7dad939981fcb4e 792 PANTHER PTHR31273 11 786 5.4E-151 T 22-04-2016 R615_RS04010 8abbea1114c43f12d7dad939981fcb4e 792 Pfam PF09364 XFP N-terminal domain 59 340 9.1E-11 T 22-04-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal R615_RS04010 8abbea1114c43f12d7dad939981fcb4e 792 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 418 587 1.0E-42 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 R615_RS04010 8abbea1114c43f12d7dad939981fcb4e 792 Gene3D G3DSA:3.40.50.970 58 354 3.1E-10 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS01925 9d7e7f030419a9d06450b0792ecf37ee 115 Pfam PF13430 Domain of unknown function (DUF4112) 11 113 6.0E-34 T 22-04-2016 IPR025187 Protein of unknown function DUF4112 R615_RS01925 9d7e7f030419a9d06450b0792ecf37ee 115 PANTHER PTHR35519 4 113 1.3E-31 T 22-04-2016 R615_RS13745 f06c3caf4dda883e9c6a82cd19e1a247 553 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 376 541 2.3E-48 T 22-04-2016 IPR000160 GGDEF domain R615_RS13745 f06c3caf4dda883e9c6a82cd19e1a247 553 SMART SM00267 369 543 5.1E-60 T 22-04-2016 IPR000160 GGDEF domain R615_RS13745 f06c3caf4dda883e9c6a82cd19e1a247 553 PANTHER PTHR10799:SF750 32 540 1.9E-31 T 22-04-2016 R615_RS13745 f06c3caf4dda883e9c6a82cd19e1a247 553 Gene3D G3DSA:3.30.70.270 382 542 3.2E-52 T 22-04-2016 R615_RS13745 f06c3caf4dda883e9c6a82cd19e1a247 553 Pfam PF07696 7TMR-DISM extracellular 2 5 115 1.1E-16 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 R615_RS13745 f06c3caf4dda883e9c6a82cd19e1a247 553 Pfam PF00990 Diguanylate cyclase, GGDEF domain 381 538 3.7E-46 T 22-04-2016 IPR000160 GGDEF domain R615_RS13745 f06c3caf4dda883e9c6a82cd19e1a247 553 Pfam PF07695 7TM diverse intracellular signalling 132 332 3.7E-29 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 R615_RS13745 f06c3caf4dda883e9c6a82cd19e1a247 553 SUPERFAMILY SSF55073 385 541 2.75E-47 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS13745 f06c3caf4dda883e9c6a82cd19e1a247 553 PANTHER PTHR10799 32 540 1.9E-31 T 22-04-2016 R615_RS16760 59dc2c776331d39f324077641edb0847 293 PANTHER PTHR10992:SF800 14 292 5.2E-74 T 22-04-2016 R615_RS16760 59dc2c776331d39f324077641edb0847 293 SUPERFAMILY SSF53474 13 291 1.65E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS16760 59dc2c776331d39f324077641edb0847 293 Gene3D G3DSA:3.40.50.1820 19 291 3.4E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS16760 59dc2c776331d39f324077641edb0847 293 PANTHER PTHR10992 14 292 5.2E-74 T 22-04-2016 R615_RS16760 59dc2c776331d39f324077641edb0847 293 Pfam PF12697 Alpha/beta hydrolase family 41 285 5.8E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS16760 59dc2c776331d39f324077641edb0847 293 PRINTS PR00412 Epoxide hydrolase signature 267 289 8.7E-10 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 R615_RS16760 59dc2c776331d39f324077641edb0847 293 PRINTS PR00412 Epoxide hydrolase signature 45 63 8.7E-10 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 R615_RS16760 59dc2c776331d39f324077641edb0847 293 PRINTS PR00412 Epoxide hydrolase signature 109 122 8.7E-10 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 PANTHER PTHR22572:SF115 4 448 9.9E-211 T 22-04-2016 R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 SUPERFAMILY SSF51161 254 437 3.32E-51 T 22-04-2016 IPR011004 Trimeric LpxA-like R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 PANTHER PTHR22572 4 448 9.9E-211 T 22-04-2016 R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 402 430 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 SUPERFAMILY SSF53448 1 250 6.08E-61 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 Gene3D G3DSA:2.160.10.10 326 453 3.7E-34 T 22-04-2016 R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 Pfam PF12804 MobA-like NTP transferase domain 6 127 4.2E-24 T 22-04-2016 IPR025877 MobA-like NTP transferase R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 Gene3D G3DSA:3.90.550.10 1 241 1.2E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 Gene3D G3DSA:2.160.10.10 242 325 6.7E-15 T 22-04-2016 R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 394 428 4.7E-8 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 451 42.372 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 453 1.7E-191 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 R615_RS15465 675da252df3b2a4fae590a36bc7c928f 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 299 8.4E-6 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS06520 70010d2ba2d0f2733b19d5cc0c0b57bb 245 PANTHER PTHR22572:SF15 11 228 4.8E-40 T 22-04-2016 R615_RS06520 70010d2ba2d0f2733b19d5cc0c0b57bb 245 PANTHER PTHR22572 11 228 4.8E-40 T 22-04-2016 R615_RS06520 70010d2ba2d0f2733b19d5cc0c0b57bb 245 SUPERFAMILY SSF53448 5 231 9.39E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS06520 70010d2ba2d0f2733b19d5cc0c0b57bb 245 Gene3D G3DSA:3.90.550.10 10 233 1.4E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS06520 70010d2ba2d0f2733b19d5cc0c0b57bb 245 Pfam PF00483 Nucleotidyl transferase 11 231 7.8E-22 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 R615_RS05830 efdee3e16c7281b222d6865de71f104c 458 Pfam PF01926 50S ribosome-binding GTPase 13 155 6.1E-14 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS05830 efdee3e16c7281b222d6865de71f104c 458 Gene3D G3DSA:3.40.50.300 10 179 4.1E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05830 efdee3e16c7281b222d6865de71f104c 458 SUPERFAMILY SSF52540 114 174 5.2E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05830 efdee3e16c7281b222d6865de71f104c 458 SUPERFAMILY SSF52540 8 84 5.2E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05830 efdee3e16c7281b222d6865de71f104c 458 Pfam PF11981 Domain of unknown function (DUF3482) 168 414 1.9E-71 T 22-04-2016 IPR021871 Protein of unknown function DUF3482 R615_RS12670 f077897ecedf42683f54ce07aec3d4be 188 SMART SM00782 6 53 4.6E-18 T 22-04-2016 IPR013991 PhnA protein N-terminal, proteobacterial R615_RS12670 f077897ecedf42683f54ce07aec3d4be 188 PANTHER PTHR30305 1 187 1.9E-81 T 22-04-2016 R615_RS12670 f077897ecedf42683f54ce07aec3d4be 188 PANTHER PTHR30305:SF2 1 187 1.9E-81 T 22-04-2016 R615_RS12670 f077897ecedf42683f54ce07aec3d4be 188 Pfam PF03831 PhnA domain 123 188 6.8E-24 T 22-04-2016 IPR013988 PhnA protein, C-terminal R615_RS12670 f077897ecedf42683f54ce07aec3d4be 188 SUPERFAMILY SSF82057 118 188 6.87E-22 T 22-04-2016 R615_RS12670 f077897ecedf42683f54ce07aec3d4be 188 Pfam PF08274 PhnA Zinc-Ribbon 13 53 5.4E-8 T 22-04-2016 IPR013987 PhnA protein, N-terminal R615_RS12670 f077897ecedf42683f54ce07aec3d4be 188 Gene3D G3DSA:2.30.30.40 121 188 9.1E-23 T 22-04-2016 R615_RS11355 3d7ecb191e125f55d88e9ed34c27a930 110 SUPERFAMILY SSF103481 6 106 1.12E-22 T 22-04-2016 R615_RS11355 3d7ecb191e125f55d88e9ed34c27a930 110 Pfam PF00893 Small Multidrug Resistance protein 3 94 1.0E-30 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 R615_RS11355 3d7ecb191e125f55d88e9ed34c27a930 110 PANTHER PTHR30561 1 110 1.3E-53 T 22-04-2016 R615_RS11355 3d7ecb191e125f55d88e9ed34c27a930 110 PANTHER PTHR30561:SF1 1 110 1.3E-53 T 22-04-2016 R615_RS05270 4f35a3410123bbd448000a3ac8d07a5c 234 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 6 234 2.9E-92 T 22-04-2016 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 R615_RS05270 4f35a3410123bbd448000a3ac8d07a5c 234 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 6 234 30.53 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 R615_RS05270 4f35a3410123bbd448000a3ac8d07a5c 234 PANTHER PTHR11228:SF6 6 177 3.4E-22 T 22-04-2016 R615_RS05270 4f35a3410123bbd448000a3ac8d07a5c 234 PIRSF PIRSF000370 4 234 2.1E-32 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 R615_RS05270 4f35a3410123bbd448000a3ac8d07a5c 234 Gene3D G3DSA:3.80.30.10 95 132 1.9E-7 T 22-04-2016 R615_RS05270 4f35a3410123bbd448000a3ac8d07a5c 234 PANTHER PTHR11228 6 177 3.4E-22 T 22-04-2016 R615_RS05270 4f35a3410123bbd448000a3ac8d07a5c 234 SUPERFAMILY SSF102114 49 145 4.71E-6 T 22-04-2016 R615_RS12330 16d4fa139ee6c93ad16e55747193a134 377 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 5 374 9.3E-138 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 R615_RS12330 16d4fa139ee6c93ad16e55747193a134 377 PIRSF PIRSF015557 1 377 7.4E-138 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 R615_RS12330 16d4fa139ee6c93ad16e55747193a134 377 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 5 374 7.3E-135 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 R615_RS05275 0784060912262bd15295b1c2d6e360ee 220 PANTHER PTHR11587:SF3 2 218 3.9E-70 T 22-04-2016 R615_RS05275 0784060912262bd15295b1c2d6e360ee 220 PANTHER PTHR11587 2 218 3.9E-70 T 22-04-2016 R615_RS05275 0784060912262bd15295b1c2d6e360ee 220 PIRSF PIRSF006293 1 220 7.7E-79 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 R615_RS05275 0784060912262bd15295b1c2d6e360ee 220 Pfam PF06508 Queuosine biosynthesis protein QueC 4 207 2.2E-69 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 R615_RS05275 0784060912262bd15295b1c2d6e360ee 220 Gene3D G3DSA:3.40.50.620 2 218 3.2E-74 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS05275 0784060912262bd15295b1c2d6e360ee 220 SUPERFAMILY SSF52402 3 217 7.5E-65 T 22-04-2016 R615_RS05275 0784060912262bd15295b1c2d6e360ee 220 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 215 50.147 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 R615_RS05275 0784060912262bd15295b1c2d6e360ee 220 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 202 4.4E-67 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 R615_RS14885 cf9116c736f83d35a9edc80fa2ff8350 161 PANTHER PTHR34584 3 159 5.4E-44 T 22-04-2016 R615_RS14885 cf9116c736f83d35a9edc80fa2ff8350 161 PANTHER PTHR34584:SF1 3 159 5.4E-44 T 22-04-2016 R615_RS14885 cf9116c736f83d35a9edc80fa2ff8350 161 Pfam PF01899 Na+/H+ ion antiporter subunit 12 158 1.5E-45 T 22-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 R615_RS14885 cf9116c736f83d35a9edc80fa2ff8350 161 PIRSF PIRSF019239 1 161 3.1E-46 T 22-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 R615_RS03325 2e15f606b217bdbbae16475186b15f33 163 SUPERFAMILY SSF55021 1 75 8.09E-22 T 22-04-2016 R615_RS03325 2e15f606b217bdbbae16475186b15f33 163 SUPERFAMILY SSF55021 79 162 1.68E-25 T 22-04-2016 R615_RS03325 2e15f606b217bdbbae16475186b15f33 163 PANTHER PTHR30239 1 162 7.7E-87 T 22-04-2016 R615_RS03325 2e15f606b217bdbbae16475186b15f33 163 Gene3D G3DSA:3.30.70.1150 83 161 4.8E-29 T 22-04-2016 R615_RS03325 2e15f606b217bdbbae16475186b15f33 163 Pfam PF13710 ACT domain 12 72 5.1E-17 T 22-04-2016 R615_RS03325 2e15f606b217bdbbae16475186b15f33 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 1.0E-31 T 22-04-2016 R615_RS03325 2e15f606b217bdbbae16475186b15f33 163 Gene3D G3DSA:3.30.70.260 1 78 1.6E-35 T 22-04-2016 R615_RS03325 2e15f606b217bdbbae16475186b15f33 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 2.3E-62 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS03325 2e15f606b217bdbbae16475186b15f33 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 6.3E-26 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS13200 865afa397cfb07dc2f393c7452976c8e 428 Gene3D G3DSA:3.90.1150.10 8 63 1.0E-58 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS13200 865afa397cfb07dc2f393c7452976c8e 428 Gene3D G3DSA:3.90.1150.10 335 427 1.0E-58 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS13200 865afa397cfb07dc2f393c7452976c8e 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 245 282 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS13200 865afa397cfb07dc2f393c7452976c8e 428 Gene3D G3DSA:3.40.640.10 64 330 7.7E-93 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS13200 865afa397cfb07dc2f393c7452976c8e 428 SUPERFAMILY SSF53383 8 425 1.41E-134 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS13200 865afa397cfb07dc2f393c7452976c8e 428 PANTHER PTHR11986 7 425 2.7E-204 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS13200 865afa397cfb07dc2f393c7452976c8e 428 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 425 5.0E-182 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 R615_RS13200 865afa397cfb07dc2f393c7452976c8e 428 Pfam PF00202 Aminotransferase class-III 27 424 2.2E-126 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS13200 865afa397cfb07dc2f393c7452976c8e 428 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 3 427 50.139 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 R615_RS13200 865afa397cfb07dc2f393c7452976c8e 428 PANTHER PTHR11986:SF8 7 425 2.7E-204 T 22-04-2016 R615_RS13070 c4d2b0f55ae4a171ac6e1bb038595420 405 SUPERFAMILY SSF56266 14 401 1.7E-132 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 R615_RS13070 c4d2b0f55ae4a171ac6e1bb038595420 405 Gene3D G3DSA:3.60.70.12 10 276 2.1E-94 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 R615_RS13070 c4d2b0f55ae4a171ac6e1bb038595420 405 PANTHER PTHR23100 15 405 9.8E-162 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 R615_RS13070 c4d2b0f55ae4a171ac6e1bb038595420 405 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 13 405 4.4E-116 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 R615_RS13070 c4d2b0f55ae4a171ac6e1bb038595420 405 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 405 145.323 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 R615_RS13070 c4d2b0f55ae4a171ac6e1bb038595420 405 Pfam PF01960 ArgJ family 21 405 3.2E-137 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 R615_RS13070 c4d2b0f55ae4a171ac6e1bb038595420 405 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 22 405 2.0E-130 T 22-04-2016 R615_RS13070 c4d2b0f55ae4a171ac6e1bb038595420 405 PANTHER PTHR23100:SF0 15 405 9.8E-162 T 22-04-2016 R615_RS02360 c2dd60976a97a291327c0c5f247e9667 499 SUPERFAMILY SSF51905 428 489 1.51E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS02360 c2dd60976a97a291327c0c5f247e9667 499 SUPERFAMILY SSF51905 193 295 1.51E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS02360 c2dd60976a97a291327c0c5f247e9667 499 SUPERFAMILY SSF51905 1 162 1.51E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS02360 c2dd60976a97a291327c0c5f247e9667 499 Gene3D G3DSA:3.50.50.60 2 144 2.3E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS02360 c2dd60976a97a291327c0c5f247e9667 499 Gene3D G3DSA:3.50.50.60 197 297 2.3E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS02360 c2dd60976a97a291327c0c5f247e9667 499 Gene3D G3DSA:3.50.50.60 392 489 2.3E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS02360 c2dd60976a97a291327c0c5f247e9667 499 Pfam PF00890 FAD binding domain 6 54 1.4E-6 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain R615_RS02360 c2dd60976a97a291327c0c5f247e9667 499 Pfam PF05199 GMC oxidoreductase 425 480 5.4E-13 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 R615_RS02360 c2dd60976a97a291327c0c5f247e9667 499 PANTHER PTHR10668:SF68 1 484 6.7E-22 T 22-04-2016 R615_RS02360 c2dd60976a97a291327c0c5f247e9667 499 PANTHER PTHR10668 1 484 6.7E-22 T 22-04-2016 R615_RS02360 c2dd60976a97a291327c0c5f247e9667 499 Pfam PF00732 GMC oxidoreductase 94 276 5.6E-7 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 R615_RS05040 20bbf825fbaad28459784c9c672abf22 111 SUPERFAMILY SSF47226 2 109 1.83E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS05040 20bbf825fbaad28459784c9c672abf22 111 Pfam PF01627 Hpt domain 23 103 8.0E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS05040 20bbf825fbaad28459784c9c672abf22 111 Gene3D G3DSA:1.20.120.160 2 108 6.6E-25 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS06875 96fbe4cb08d7c653892c99b99ac7b1f5 236 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 R615_RS06875 96fbe4cb08d7c653892c99b99ac7b1f5 236 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 R615_RS06875 96fbe4cb08d7c653892c99b99ac7b1f5 236 PANTHER PTHR11609:SF2 3 236 3.5E-119 T 22-04-2016 R615_RS06875 96fbe4cb08d7c653892c99b99ac7b1f5 236 PANTHER PTHR11609 3 236 3.5E-119 T 22-04-2016 R615_RS06875 96fbe4cb08d7c653892c99b99ac7b1f5 236 Gene3D G3DSA:3.30.200.20 6 93 1.8E-34 T 22-04-2016 R615_RS06875 96fbe4cb08d7c653892c99b99ac7b1f5 236 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 4.2E-77 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 R615_RS06875 96fbe4cb08d7c653892c99b99ac7b1f5 236 Pfam PF01259 SAICAR synthetase 6 229 9.0E-60 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 R615_RS06875 96fbe4cb08d7c653892c99b99ac7b1f5 236 Gene3D G3DSA:3.30.470.20 94 220 1.1E-50 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS06875 96fbe4cb08d7c653892c99b99ac7b1f5 236 SUPERFAMILY SSF56104 2 232 2.78E-78 T 22-04-2016 R615_RS06875 96fbe4cb08d7c653892c99b99ac7b1f5 236 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 31.151 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 Gene3D G3DSA:3.30.70.1430 42 142 2.1E-26 T 22-04-2016 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 Gene3D G3DSA:3.30.2090.10 727 804 4.0E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 Gene3D G3DSA:3.30.2090.10 192 275 2.7E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 SUPERFAMILY SSF82714 193 275 7.59E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 PANTHER PTHR32063:SF24 2 1031 0.0 T 22-04-2016 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 PANTHER PTHR32063 2 1031 0.0 T 22-04-2016 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1030 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 SUPERFAMILY SSF82714 723 805 1.31E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 SUPERFAMILY SSF82693 277 333 1.07E-18 T 22-04-2016 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 SUPERFAMILY SSF82693 154 191 1.07E-18 T 22-04-2016 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 Gene3D G3DSA:3.30.70.1430 575 664 9.6E-6 T 22-04-2016 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 SUPERFAMILY SSF82866 299 503 2.62E-34 T 22-04-2016 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 Gene3D G3DSA:1.10.3850.10 283 504 1.4E-50 T 22-04-2016 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 Gene3D G3DSA:1.10.3850.10 813 1028 2.0E-57 T 22-04-2016 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 SUPERFAMILY SSF82693 42 127 2.28E-20 T 22-04-2016 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.4E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.4E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.4E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 1.4E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 1.4E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.4E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 1.4E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 SUPERFAMILY SSF82866 807 1028 1.44E-52 T 22-04-2016 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 SUPERFAMILY SSF82693 563 664 1.33E-8 T 22-04-2016 R615_RS15600 38f98e47693c038481c5b151776b77b8 1031 Pfam PF00873 AcrB/AcrD/AcrF family 6 1027 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS06580 7bca73072c899ae52ceede59ad0a2b5c 101 SUPERFAMILY SSF47729 4 93 3.24E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 R615_RS06580 7bca73072c899ae52ceede59ad0a2b5c 101 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 97 4.9E-50 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 R615_RS06580 7bca73072c899ae52ceede59ad0a2b5c 101 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 5.3E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS06580 7bca73072c899ae52ceede59ad0a2b5c 101 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 5.3E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS06580 7bca73072c899ae52ceede59ad0a2b5c 101 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 5.3E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS06580 7bca73072c899ae52ceede59ad0a2b5c 101 Gene3D G3DSA:4.10.520.10 3 93 1.7E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 R615_RS06580 7bca73072c899ae52ceede59ad0a2b5c 101 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 30.178 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 R615_RS06580 7bca73072c899ae52ceede59ad0a2b5c 101 PANTHER PTHR33175:SF2 3 95 1.3E-51 T 22-04-2016 R615_RS06580 7bca73072c899ae52ceede59ad0a2b5c 101 SMART SM00411 4 93 2.1E-42 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS06580 7bca73072c899ae52ceede59ad0a2b5c 101 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 R615_RS06580 7bca73072c899ae52ceede59ad0a2b5c 101 PANTHER PTHR33175 3 95 1.3E-51 T 22-04-2016 R615_RS06580 7bca73072c899ae52ceede59ad0a2b5c 101 Pfam PF00216 Bacterial DNA-binding protein 4 92 1.5E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS01670 d2eebee10a8838537ca0f8c92335a2b7 1165 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 15 1163 0.0 T 22-04-2016 IPR017731 Type VI secretion system, IcmF R615_RS01670 d2eebee10a8838537ca0f8c92335a2b7 1165 SUPERFAMILY SSF52540 125 310 7.35E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01670 d2eebee10a8838537ca0f8c92335a2b7 1165 Pfam PF06744 Type VI secretion protein IcmF C-terminal 917 1113 8.9E-50 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal R615_RS01670 d2eebee10a8838537ca0f8c92335a2b7 1165 Pfam PF14331 ImcF-related N-terminal domain 200 456 1.8E-94 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain R615_RS01670 d2eebee10a8838537ca0f8c92335a2b7 1165 Gene3D G3DSA:3.40.50.300 592 619 2.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01670 d2eebee10a8838537ca0f8c92335a2b7 1165 Gene3D G3DSA:3.40.50.300 135 276 2.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01670 d2eebee10a8838537ca0f8c92335a2b7 1165 Pfam PF06761 Intracellular multiplication and human macrophage-killing 508 807 4.9E-65 T 22-04-2016 IPR009612 ImcF-related R615_RS01670 d2eebee10a8838537ca0f8c92335a2b7 1165 PANTHER PTHR36153 7 1165 1.1E-249 T 22-04-2016 R615_RS01670 d2eebee10a8838537ca0f8c92335a2b7 1165 PANTHER PTHR36153:SF1 7 1165 1.1E-249 T 22-04-2016 R615_RS16190 caa45207d0d82dd8f6c13227094a7623 272 Gene3D G3DSA:1.10.3730.10 162 266 7.6E-35 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 R615_RS16190 caa45207d0d82dd8f6c13227094a7623 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 99 3.0E-19 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal R615_RS16190 caa45207d0d82dd8f6c13227094a7623 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 266 26.184 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 R615_RS16190 caa45207d0d82dd8f6c13227094a7623 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 266 1.1E-77 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 R615_RS16190 caa45207d0d82dd8f6c13227094a7623 272 SUPERFAMILY SSF48179 162 269 5.78E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS16190 caa45207d0d82dd8f6c13227094a7623 272 SUPERFAMILY SSF51735 4 159 3.1E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS16190 caa45207d0d82dd8f6c13227094a7623 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 R615_RS16190 caa45207d0d82dd8f6c13227094a7623 272 Gene3D G3DSA:3.40.50.720 2 159 2.7E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS16190 caa45207d0d82dd8f6c13227094a7623 272 PIRSF PIRSF000193 1 269 4.1E-75 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 R615_RS16190 caa45207d0d82dd8f6c13227094a7623 272 PANTHER PTHR11645 2 270 5.1E-107 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 R615_RS16190 caa45207d0d82dd8f6c13227094a7623 272 PANTHER PTHR11645:SF0 2 270 5.1E-107 T 22-04-2016 R615_RS16190 caa45207d0d82dd8f6c13227094a7623 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 1.1E-33 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 R615_RS15830 d772ef13c8fa13a1c6b49e5e96948645 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 84 24.405 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15830 d772ef13c8fa13a1c6b49e5e96948645 88 ProSitePatterns PS00056 Ribosomal protein S17 signature. 59 71 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15830 d772ef13c8fa13a1c6b49e5e96948645 88 SUPERFAMILY SSF50249 9 84 2.1E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS15830 d772ef13c8fa13a1c6b49e5e96948645 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 2.4E-35 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15830 d772ef13c8fa13a1c6b49e5e96948645 88 Pfam PF00366 Ribosomal protein S17 13 79 7.1E-32 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15830 d772ef13c8fa13a1c6b49e5e96948645 88 PANTHER PTHR10744 9 85 3.0E-38 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15830 d772ef13c8fa13a1c6b49e5e96948645 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 8.0E-27 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15830 d772ef13c8fa13a1c6b49e5e96948645 88 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 1.5E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15830 d772ef13c8fa13a1c6b49e5e96948645 88 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 1.5E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15830 d772ef13c8fa13a1c6b49e5e96948645 88 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 1.5E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15830 d772ef13c8fa13a1c6b49e5e96948645 88 Gene3D G3DSA:2.40.50.140 9 84 4.8E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS13895 5d2240a6c50e04052686c5f9b4e3fa27 201 SUPERFAMILY SSF46689 13 80 3.88E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS13895 5d2240a6c50e04052686c5f9b4e3fa27 201 Gene3D G3DSA:1.10.357.10 7 183 1.5E-25 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS13895 5d2240a6c50e04052686c5f9b4e3fa27 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 5.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS13895 5d2240a6c50e04052686c5f9b4e3fa27 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 5.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS13895 5d2240a6c50e04052686c5f9b4e3fa27 201 PANTHER PTHR30328 1 188 4.5E-20 T 22-04-2016 R615_RS13895 5d2240a6c50e04052686c5f9b4e3fa27 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 66 1.6E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS13895 5d2240a6c50e04052686c5f9b4e3fa27 201 PANTHER PTHR30328:SF20 1 188 4.5E-20 T 22-04-2016 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 SUPERFAMILY SSF53901 272 392 2.23E-43 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 3.0E-146 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 PIRSF PIRSF000429 1 392 3.0E-131 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 Pfam PF02803 Thiolase, C-terminal domain 271 392 2.3E-52 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 Pfam PF00108 Thiolase, N-terminal domain 4 262 2.9E-106 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 Gene3D G3DSA:3.40.47.10 142 193 4.3E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 Gene3D G3DSA:3.40.47.10 277 391 4.3E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 SUPERFAMILY SSF53901 3 270 6.9E-89 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 Gene3D G3DSA:3.40.47.10 3 123 8.4E-77 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 Gene3D G3DSA:3.40.47.10 194 276 8.4E-77 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 PANTHER PTHR18919:SF95 1 392 8.5E-232 T 22-04-2016 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 PANTHER PTHR18919 1 392 8.5E-232 T 22-04-2016 R615_RS16270 642bd81ebaad0e054880f8d6d6f5e81b 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 4.7E-50 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 4.7E-50 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 4.7E-50 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 4.7E-50 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 4.7E-50 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 PANTHER PTHR10381:SF22 7 206 1.5E-133 T 22-04-2016 R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 22-04-2016 IPR018215 ClpP, Ser active site R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 PANTHER PTHR10381 7 206 1.5E-133 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 SUPERFAMILY SSF52096 24 205 6.63E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 42.507 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 1.2E-100 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 Gene3D G3DSA:3.90.226.10 16 205 3.3E-88 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 Pfam PF00574 Clp protease 26 205 1.4E-86 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA R615_RS08165 0366684d4f913647886e4b3a5ca9bdf9 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 22-04-2016 IPR033135 ClpP, histidine active site R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 PIRSF PIRSF000722 1 393 9.9E-133 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 TIGRFAM TIGR00016 ackA: acetate kinase 3 390 2.0E-132 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 PANTHER PTHR21060:SF11 1 390 2.0E-159 T 22-04-2016 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 PRINTS PR00471 Acetate kinase family signature 5 16 4.2E-42 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 PRINTS PR00471 Acetate kinase family signature 167 180 4.2E-42 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 PRINTS PR00471 Acetate kinase family signature 295 308 4.2E-42 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 PRINTS PR00471 Acetate kinase family signature 197 218 4.2E-42 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 PRINTS PR00471 Acetate kinase family signature 317 333 4.2E-42 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 PRINTS PR00471 Acetate kinase family signature 371 383 4.2E-42 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 PANTHER PTHR21060 1 390 2.0E-159 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 SUPERFAMILY SSF53067 4 189 2.02E-57 T 22-04-2016 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 Gene3D G3DSA:3.30.420.40 133 198 2.6E-7 T 22-04-2016 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 Gene3D G3DSA:3.30.420.40 199 389 2.3E-64 T 22-04-2016 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 197 214 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 Hamap MF_00020 Acetate kinase [ackA]. 1 393 155.693 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 SUPERFAMILY SSF53067 151 390 7.32E-80 T 22-04-2016 R615_RS11895 6308293b305bbf2abe25685620f7cd34 393 Pfam PF00871 Acetokinase family 5 383 8.1E-128 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 R615_RS10900 8fcad4e4ecd5d71e10e39a763c73f9cf 447 PANTHER PTHR33408 1 445 4.2E-27 T 22-04-2016 R615_RS10900 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF05598 Transposase domain (DUF772) 52 128 3.6E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS10900 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF13751 Transposase DDE domain 324 442 1.4E-25 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS03085 8fcad4e4ecd5d71e10e39a763c73f9cf 447 PANTHER PTHR33408 1 445 4.2E-27 T 22-04-2016 R615_RS03085 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF05598 Transposase domain (DUF772) 52 128 3.6E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS03085 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF13751 Transposase DDE domain 324 442 1.4E-25 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS14160 8fcad4e4ecd5d71e10e39a763c73f9cf 447 PANTHER PTHR33408 1 445 4.2E-27 T 22-04-2016 R615_RS14160 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF05598 Transposase domain (DUF772) 52 128 3.6E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS14160 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF13751 Transposase DDE domain 324 442 1.4E-25 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS00515 8fcad4e4ecd5d71e10e39a763c73f9cf 447 PANTHER PTHR33408 1 445 4.2E-27 T 22-04-2016 R615_RS00515 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF05598 Transposase domain (DUF772) 52 128 3.6E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS00515 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF13751 Transposase DDE domain 324 442 1.4E-25 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS01555 8fcad4e4ecd5d71e10e39a763c73f9cf 447 PANTHER PTHR33408 1 445 4.2E-27 T 22-04-2016 R615_RS01555 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF05598 Transposase domain (DUF772) 52 128 3.6E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS01555 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF13751 Transposase DDE domain 324 442 1.4E-25 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS12935 8fcad4e4ecd5d71e10e39a763c73f9cf 447 PANTHER PTHR33408 1 445 4.2E-27 T 22-04-2016 R615_RS12935 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF05598 Transposase domain (DUF772) 52 128 3.6E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS12935 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF13751 Transposase DDE domain 324 442 1.4E-25 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS16635 8fcad4e4ecd5d71e10e39a763c73f9cf 447 PANTHER PTHR33408 1 445 4.2E-27 T 22-04-2016 R615_RS16635 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF05598 Transposase domain (DUF772) 52 128 3.6E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS16635 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF13751 Transposase DDE domain 324 442 1.4E-25 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS02400 8fcad4e4ecd5d71e10e39a763c73f9cf 447 PANTHER PTHR33408 1 445 4.2E-27 T 22-04-2016 R615_RS02400 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF05598 Transposase domain (DUF772) 52 128 3.6E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS02400 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF13751 Transposase DDE domain 324 442 1.4E-25 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS00560 8fcad4e4ecd5d71e10e39a763c73f9cf 447 PANTHER PTHR33408 1 445 4.2E-27 T 22-04-2016 R615_RS00560 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF05598 Transposase domain (DUF772) 52 128 3.6E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS00560 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF13751 Transposase DDE domain 324 442 1.4E-25 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS02825 8fcad4e4ecd5d71e10e39a763c73f9cf 447 PANTHER PTHR33408 1 445 4.2E-27 T 22-04-2016 R615_RS02825 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF05598 Transposase domain (DUF772) 52 128 3.6E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS02825 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF13751 Transposase DDE domain 324 442 1.4E-25 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS05590 8fcad4e4ecd5d71e10e39a763c73f9cf 447 PANTHER PTHR33408 1 445 4.2E-27 T 22-04-2016 R615_RS05590 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF05598 Transposase domain (DUF772) 52 128 3.6E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS05590 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF13751 Transposase DDE domain 324 442 1.4E-25 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS11320 8fcad4e4ecd5d71e10e39a763c73f9cf 447 PANTHER PTHR33408 1 445 4.2E-27 T 22-04-2016 R615_RS11320 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF05598 Transposase domain (DUF772) 52 128 3.6E-23 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS11320 8fcad4e4ecd5d71e10e39a763c73f9cf 447 Pfam PF13751 Transposase DDE domain 324 442 1.4E-25 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 SUPERFAMILY SSF103025 3 276 4.91E-90 T 22-04-2016 R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 354 1.9E-128 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 Gene3D G3DSA:3.30.1360.120 127 229 1.4E-26 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 Gene3D G3DSA:3.30.1360.120 3 65 3.9E-24 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 PIRSF PIRSF006487 1 360 9.9E-85 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 354 42.847 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 PANTHER PTHR13847:SF5 5 352 5.7E-57 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 260 349 7.7E-20 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 Gene3D G3DSA:2.40.30.110 278 358 8.1E-28 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 SUPERFAMILY SSF101790 268 357 2.29E-26 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 252 8.7E-86 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 Gene3D G3DSA:3.30.70.1400 66 126 4.6E-31 T 22-04-2016 R615_RS13250 5587cbe1c1142a5b0508b9b2a256aa15 360 PANTHER PTHR13847 5 352 5.7E-57 T 22-04-2016 R615_RS11645 85b318f32d69fcb41cca804ebb034dcb 438 PANTHER PTHR22777 5 427 3.3E-195 T 22-04-2016 R615_RS11645 85b318f32d69fcb41cca804ebb034dcb 438 PANTHER PTHR22777:SF16 5 427 3.3E-195 T 22-04-2016 R615_RS11645 85b318f32d69fcb41cca804ebb034dcb 438 SUPERFAMILY SSF56176 343 433 2.18E-20 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 R615_RS11645 85b318f32d69fcb41cca804ebb034dcb 438 SUPERFAMILY SSF54631 199 334 1.89E-19 T 22-04-2016 R615_RS11645 85b318f32d69fcb41cca804ebb034dcb 438 Gene3D G3DSA:3.30.465.10 341 435 4.1E-23 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 R615_RS11645 85b318f32d69fcb41cca804ebb034dcb 438 Pfam PF01595 Domain of unknown function DUF21 5 196 9.2E-38 T 22-04-2016 IPR002550 Domain of unknown function DUF21 R615_RS11645 85b318f32d69fcb41cca804ebb034dcb 438 Gene3D G3DSA:3.10.580.10 200 333 2.5E-12 T 22-04-2016 R615_RS11645 85b318f32d69fcb41cca804ebb034dcb 438 SMART SM01091 345 427 1.4E-23 T 22-04-2016 IPR005170 Transporter-associated domain R615_RS11645 85b318f32d69fcb41cca804ebb034dcb 438 Pfam PF03471 Transporter associated domain 346 426 6.0E-18 T 22-04-2016 IPR005170 Transporter-associated domain R615_RS00305 a3b82af3c711c5ebe942aa2fdff5635e 321 Gene3D G3DSA:3.40.50.720 100 212 1.5E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00305 a3b82af3c711c5ebe942aa2fdff5635e 321 Gene3D G3DSA:1.10.287.70 8 92 3.5E-17 T 22-04-2016 R615_RS00305 a3b82af3c711c5ebe942aa2fdff5635e 321 SUPERFAMILY SSF51735 103 218 1.38E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00305 a3b82af3c711c5ebe942aa2fdff5635e 321 Pfam PF07885 Ion channel 33 85 2.6E-10 T 22-04-2016 IPR013099 Potassium channel domain R615_RS00305 a3b82af3c711c5ebe942aa2fdff5635e 321 Pfam PF02254 TrkA-N domain 116 217 2.0E-5 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 R615_RS00305 a3b82af3c711c5ebe942aa2fdff5635e 321 SUPERFAMILY SSF81324 6 111 2.09E-18 T 22-04-2016 R615_RS00305 a3b82af3c711c5ebe942aa2fdff5635e 321 PANTHER PTHR16254 1 268 1.9E-19 T 22-04-2016 R615_RS00305 a3b82af3c711c5ebe942aa2fdff5635e 321 PANTHER PTHR16254:SF21 1 268 1.9E-19 T 22-04-2016 R615_RS02030 86b17fd6c296604421b9c6c808a44752 190 Hamap MF_00528 Septum formation protein Maf [maf]. 1 186 34.753 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 R615_RS02030 86b17fd6c296604421b9c6c808a44752 190 PANTHER PTHR11746 117 179 5.8E-18 T 22-04-2016 R615_RS02030 86b17fd6c296604421b9c6c808a44752 190 SUPERFAMILY SSF52972 1 181 5.36E-64 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like R615_RS02030 86b17fd6c296604421b9c6c808a44752 190 PIRSF PIRSF006305 1 188 4.9E-59 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 R615_RS02030 86b17fd6c296604421b9c6c808a44752 190 Pfam PF02545 Maf-like protein 2 181 1.7E-59 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 R615_RS02030 86b17fd6c296604421b9c6c808a44752 190 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 180 2.3E-62 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 R615_RS02030 86b17fd6c296604421b9c6c808a44752 190 Gene3D G3DSA:3.90.950.10 2 184 1.3E-72 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like R615_RS04470 d6b2c0979951489cf493777c431b9c2c 278 Pfam PF01435 Peptidase family M48 75 252 2.7E-21 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 R615_RS04470 d6b2c0979951489cf493777c431b9c2c 278 Gene3D G3DSA:3.30.2010.10 72 157 5.1E-15 T 22-04-2016 R615_RS04470 d6b2c0979951489cf493777c431b9c2c 278 PANTHER PTHR22726 27 255 6.3E-24 T 22-04-2016 R615_RS15825 1e5a236ce8ca93c09e48dd51f61b08a0 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site R615_RS15825 1e5a236ce8ca93c09e48dd51f61b08a0 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.698 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 R615_RS15825 1e5a236ce8ca93c09e48dd51f61b08a0 122 Gene3D G3DSA:2.40.150.20 1 122 1.5E-53 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 R615_RS15825 1e5a236ce8ca93c09e48dd51f61b08a0 122 SMART SM01374 1 122 1.8E-84 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 R615_RS15825 1e5a236ce8ca93c09e48dd51f61b08a0 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.4E-53 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 R615_RS15825 1e5a236ce8ca93c09e48dd51f61b08a0 122 PANTHER PTHR11761 1 122 3.2E-72 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 R615_RS15825 1e5a236ce8ca93c09e48dd51f61b08a0 122 SUPERFAMILY SSF50193 1 122 1.83E-50 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 R615_RS15825 1e5a236ce8ca93c09e48dd51f61b08a0 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.3E-57 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 R615_RS13900 25ef1e5d4f23aff6b358f74f8e310ec5 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 470 589 8.1E-33 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain R615_RS13900 25ef1e5d4f23aff6b358f74f8e310ec5 596 SUPERFAMILY SSF47203 288 464 4.83E-48 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS13900 25ef1e5d4f23aff6b358f74f8e310ec5 596 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 32 6.3E-11 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria R615_RS13900 25ef1e5d4f23aff6b358f74f8e310ec5 596 Gene3D G3DSA:1.10.540.10 38 159 5.7E-13 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS13900 25ef1e5d4f23aff6b358f74f8e310ec5 596 SUPERFAMILY SSF56645 39 281 3.93E-53 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 R615_RS13900 25ef1e5d4f23aff6b358f74f8e310ec5 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 158 1.1E-8 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS13900 25ef1e5d4f23aff6b358f74f8e310ec5 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 6.5E-16 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 R615_RS13900 25ef1e5d4f23aff6b358f74f8e310ec5 596 PANTHER PTHR10909 1 477 5.1E-243 T 22-04-2016 R615_RS13900 25ef1e5d4f23aff6b358f74f8e310ec5 596 PANTHER PTHR10909:SF296 1 477 5.1E-243 T 22-04-2016 R615_RS13900 25ef1e5d4f23aff6b358f74f8e310ec5 596 Gene3D G3DSA:1.20.140.10 272 462 3.8E-52 T 22-04-2016 R615_RS13900 25ef1e5d4f23aff6b358f74f8e310ec5 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 1.7E-19 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS13900 25ef1e5d4f23aff6b358f74f8e310ec5 596 Gene3D G3DSA:2.40.110.10 162 271 3.2E-26 T 22-04-2016 R615_RS07585 9d1762b9125f362f779fadb82e9b641c 93 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 4.4E-8 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain R615_RS07585 9d1762b9125f362f779fadb82e9b641c 93 SUPERFAMILY SSF54909 1 89 1.07E-14 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel R615_RS07585 9d1762b9125f362f779fadb82e9b641c 93 Gene3D G3DSA:3.30.70.900 1 84 3.5E-11 T 22-04-2016 R615_RS15180 49aa191dd09a6f5c1238f557083abad5 507 Gene3D G3DSA:3.40.50.300 4 224 5.8E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15180 49aa191dd09a6f5c1238f557083abad5 507 Gene3D G3DSA:3.40.50.300 271 484 1.1E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15180 49aa191dd09a6f5c1238f557083abad5 507 PANTHER PTHR24220:SF239 6 380 1.4E-171 T 22-04-2016 R615_RS15180 49aa191dd09a6f5c1238f557083abad5 507 SUPERFAMILY SSF52540 270 485 1.55E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15180 49aa191dd09a6f5c1238f557083abad5 507 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS15180 49aa191dd09a6f5c1238f557083abad5 507 SMART SM00382 29 204 1.7E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS15180 49aa191dd09a6f5c1238f557083abad5 507 Pfam PF00005 ABC transporter 21 167 4.9E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS15180 49aa191dd09a6f5c1238f557083abad5 507 Pfam PF00005 ABC transporter 272 427 8.4E-13 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS15180 49aa191dd09a6f5c1238f557083abad5 507 SUPERFAMILY SSF52540 5 223 3.03E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15180 49aa191dd09a6f5c1238f557083abad5 507 PANTHER PTHR24220 6 380 1.4E-171 T 22-04-2016 R615_RS01275 4322aefa75e5e2e94272b7e3f66fb273 552 Pfam PF00884 Sulfatase 216 487 1.6E-36 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 R615_RS01275 4322aefa75e5e2e94272b7e3f66fb273 552 PANTHER PTHR30443 1 550 2.2E-71 T 22-04-2016 R615_RS01275 4322aefa75e5e2e94272b7e3f66fb273 552 Gene3D G3DSA:3.40.720.10 218 503 2.7E-15 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 R615_RS01275 4322aefa75e5e2e94272b7e3f66fb273 552 SUPERFAMILY SSF53649 218 472 6.76E-19 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 R615_RS01275 4322aefa75e5e2e94272b7e3f66fb273 552 Pfam PF08019 Domain of unknown function (DUF1705) 49 159 3.4E-6 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 R615_RS02765 77018b6903a4519a7adccaf1e3541cf2 344 SUPERFAMILY SSF48452 197 326 3.3E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS02765 77018b6903a4519a7adccaf1e3541cf2 344 Gene3D G3DSA:1.25.40.10 194 317 6.8E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS13605 26b4ca501ee14f67a7bf7bddc7bf60d9 263 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 263 41.657 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 R615_RS13605 26b4ca501ee14f67a7bf7bddc7bf60d9 263 PANTHER PTHR34148 1 263 1.3E-47 T 22-04-2016 R615_RS13605 26b4ca501ee14f67a7bf7bddc7bf60d9 263 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 8 259 3.3E-32 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 R615_RS13605 26b4ca501ee14f67a7bf7bddc7bf60d9 263 Pfam PF02654 Cobalamin-5-phosphate synthase 11 257 9.2E-50 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 R615_RS13605 26b4ca501ee14f67a7bf7bddc7bf60d9 263 PANTHER PTHR34148:SF1 1 263 1.3E-47 T 22-04-2016 R615_RS03485 e3b5a7b6296b40c9bce6700079d23c44 161 Gene3D G3DSA:3.30.70.860 95 161 2.2E-28 T 22-04-2016 R615_RS03485 e3b5a7b6296b40c9bce6700079d23c44 161 SUPERFAMILY SSF89963 88 161 1.6E-23 T 22-04-2016 IPR007551 Protein of unknown function DUF520 R615_RS03485 e3b5a7b6296b40c9bce6700079d23c44 161 Gene3D G3DSA:3.30.70.990 9 94 8.2E-30 T 22-04-2016 R615_RS03485 e3b5a7b6296b40c9bce6700079d23c44 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 3.1E-59 T 22-04-2016 IPR007551 Protein of unknown function DUF520 R615_RS03485 e3b5a7b6296b40c9bce6700079d23c44 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 26.199 T 22-04-2016 IPR007551 Protein of unknown function DUF520 R615_RS03485 e3b5a7b6296b40c9bce6700079d23c44 161 PANTHER PTHR30476 1 161 3.7E-75 T 22-04-2016 R615_RS03485 e3b5a7b6296b40c9bce6700079d23c44 161 PANTHER PTHR30476:SF0 1 161 3.7E-75 T 22-04-2016 R615_RS03485 e3b5a7b6296b40c9bce6700079d23c44 161 SUPERFAMILY SSF89963 2 84 1.78E-29 T 22-04-2016 IPR007551 Protein of unknown function DUF520 R615_RS00660 666f56b615007885037bedae319fed3d 219 PANTHER PTHR24423 4 219 2.7E-14 T 22-04-2016 R615_RS00660 666f56b615007885037bedae319fed3d 219 SUPERFAMILY SSF55874 75 219 1.44E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00660 666f56b615007885037bedae319fed3d 219 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 111 219 6.3E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00660 666f56b615007885037bedae319fed3d 219 PRINTS PR00344 Bacterial sensor protein C-terminal signature 146 160 6.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00660 666f56b615007885037bedae319fed3d 219 PRINTS PR00344 Bacterial sensor protein C-terminal signature 177 195 6.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00660 666f56b615007885037bedae319fed3d 219 PRINTS PR00344 Bacterial sensor protein C-terminal signature 206 219 6.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00660 666f56b615007885037bedae319fed3d 219 SMART SM00387 108 219 7.5E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00660 666f56b615007885037bedae319fed3d 219 PANTHER PTHR24423:SF427 4 219 2.7E-14 T 22-04-2016 R615_RS00660 666f56b615007885037bedae319fed3d 219 Gene3D G3DSA:3.30.565.10 82 219 2.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04160 7670b4ee2ede5ab2c4d17d87d1e6e667 417 Gene3D G3DSA:3.40.50.2300 51 147 4.3E-5 T 22-04-2016 R615_RS04160 7670b4ee2ede5ab2c4d17d87d1e6e667 417 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 53 412 2.8E-163 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA R615_RS04160 7670b4ee2ede5ab2c4d17d87d1e6e667 417 Pfam PF13433 Periplasmic binding protein domain 54 414 3.5E-132 T 22-04-2016 R615_RS04160 7670b4ee2ede5ab2c4d17d87d1e6e667 417 SUPERFAMILY SSF53822 52 412 2.49E-94 T 22-04-2016 IPR028082 Periplasmic binding protein-like I R615_RS04160 7670b4ee2ede5ab2c4d17d87d1e6e667 417 PANTHER PTHR30483 14 417 2.2E-189 T 22-04-2016 R615_RS04160 7670b4ee2ede5ab2c4d17d87d1e6e667 417 PANTHER PTHR30483:SF8 14 417 2.2E-189 T 22-04-2016 R615_RS04160 7670b4ee2ede5ab2c4d17d87d1e6e667 417 Gene3D G3DSA:3.40.50.2300 170 354 2.9E-65 T 22-04-2016 R615_RS17250 9273c56bee6d6fd676543660f43b4075 147 SUPERFAMILY SSF54523 6 90 2.25E-19 T 22-04-2016 R615_RS17250 9273c56bee6d6fd676543660f43b4075 147 Gene3D G3DSA:3.30.700.10 6 132 2.6E-19 T 22-04-2016 R615_RS17250 9273c56bee6d6fd676543660f43b4075 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 5.5E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17250 9273c56bee6d6fd676543660f43b4075 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17250 9273c56bee6d6fd676543660f43b4075 147 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 2 25 7.6E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17250 9273c56bee6d6fd676543660f43b4075 147 PANTHER PTHR30093:SF4 1 65 3.1E-18 T 22-04-2016 R615_RS17250 9273c56bee6d6fd676543660f43b4075 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 5 30 2.8E-8 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 R615_RS17250 9273c56bee6d6fd676543660f43b4075 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 41 59 2.8E-8 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 R615_RS17250 9273c56bee6d6fd676543660f43b4075 147 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 27 120 2.8E-11 T 22-04-2016 IPR031982 Type IV minor pilin ComP R615_RS17250 9273c56bee6d6fd676543660f43b4075 147 PANTHER PTHR30093 1 65 3.1E-18 T 22-04-2016 R615_RS10840 a55e208e4263bbc2976d27f1bd75e07f 190 SUPERFAMILY SSF52540 3 137 7.83E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10840 a55e208e4263bbc2976d27f1bd75e07f 190 Gene3D G3DSA:3.40.50.300 1 134 3.9E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10840 a55e208e4263bbc2976d27f1bd75e07f 190 Pfam PF13671 AAA domain 4 124 3.7E-12 T 22-04-2016 R615_RS10840 a55e208e4263bbc2976d27f1bd75e07f 190 PANTHER PTHR39206:SF1 1 188 3.1E-40 T 22-04-2016 R615_RS10840 a55e208e4263bbc2976d27f1bd75e07f 190 PANTHER PTHR39206 1 188 3.1E-40 T 22-04-2016 R615_RS13645 1676c639b202c3d9b3ce516174794e50 447 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 2.9E-152 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 R615_RS13645 1676c639b202c3d9b3ce516174794e50 447 Pfam PF01235 Sodium:alanine symporter family 51 447 2.4E-144 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 R615_RS13645 1676c639b202c3d9b3ce516174794e50 447 PANTHER PTHR30330:SF3 1 447 3.8E-203 T 22-04-2016 R615_RS13645 1676c639b202c3d9b3ce516174794e50 447 PANTHER PTHR30330 1 447 3.8E-203 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 R615_RS13645 1676c639b202c3d9b3ce516174794e50 447 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 88 103 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 R615_RS13645 1676c639b202c3d9b3ce516174794e50 447 PRINTS PR00175 Sodium/alanine symporter signature 352 374 1.9E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 R615_RS13645 1676c639b202c3d9b3ce516174794e50 447 PRINTS PR00175 Sodium/alanine symporter signature 411 431 1.9E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 R615_RS13645 1676c639b202c3d9b3ce516174794e50 447 PRINTS PR00175 Sodium/alanine symporter signature 308 326 1.9E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 R615_RS13645 1676c639b202c3d9b3ce516174794e50 447 PRINTS PR00175 Sodium/alanine symporter signature 185 203 1.9E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 R615_RS13645 1676c639b202c3d9b3ce516174794e50 447 PRINTS PR00175 Sodium/alanine symporter signature 213 232 1.9E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 R615_RS13645 1676c639b202c3d9b3ce516174794e50 447 PRINTS PR00175 Sodium/alanine symporter signature 88 110 1.9E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 R615_RS15245 33822e577b9c02cda4af2091a22a3d72 216 SUPERFAMILY SSF48498 83 207 1.93E-41 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal R615_RS15245 33822e577b9c02cda4af2091a22a3d72 216 Gene3D G3DSA:1.10.10.60 10 51 1.6E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS15245 33822e577b9c02cda4af2091a22a3d72 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 5.1E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS15245 33822e577b9c02cda4af2091a22a3d72 216 Pfam PF08362 YcdC-like protein, C-terminal region 66 207 5.4E-50 T 22-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 R615_RS15245 33822e577b9c02cda4af2091a22a3d72 216 PANTHER PTHR30055 2 169 1.1E-54 T 22-04-2016 R615_RS15245 33822e577b9c02cda4af2091a22a3d72 216 PANTHER PTHR30055:SF42 2 169 1.1E-54 T 22-04-2016 R615_RS15245 33822e577b9c02cda4af2091a22a3d72 216 SUPERFAMILY SSF46689 8 86 7.18E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS15245 33822e577b9c02cda4af2091a22a3d72 216 Gene3D G3DSA:1.10.10.60 52 74 3.6E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS15245 33822e577b9c02cda4af2091a22a3d72 216 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site R615_RS15245 33822e577b9c02cda4af2091a22a3d72 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 9.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS15245 33822e577b9c02cda4af2091a22a3d72 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 9.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS15245 33822e577b9c02cda4af2091a22a3d72 216 Gene3D G3DSA:1.10.357.10 75 207 9.7E-55 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS11775 9851e96b52c5bd0e83742e4d94c937ac 340 Pfam PF10974 Protein of unknown function (DUF2804) 11 339 3.6E-85 T 22-04-2016 IPR021243 Protein of unknown function DUF2804 R615_RS11775 9851e96b52c5bd0e83742e4d94c937ac 340 PANTHER PTHR35868:SF2 5 340 4.1E-90 T 22-04-2016 R615_RS11775 9851e96b52c5bd0e83742e4d94c937ac 340 PANTHER PTHR35868 5 340 4.1E-90 T 22-04-2016 R615_RS06190 da983638f038edb6c64d514379cc181e 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 289 3.3E-152 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 R615_RS06190 da983638f038edb6c64d514379cc181e 293 SUPERFAMILY SSF53448 1 288 1.82E-90 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS06190 da983638f038edb6c64d514379cc181e 293 PANTHER PTHR22572 2 272 1.6E-168 T 22-04-2016 R615_RS06190 da983638f038edb6c64d514379cc181e 293 Pfam PF00483 Nucleotidyl transferase 2 241 1.9E-72 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 R615_RS06190 da983638f038edb6c64d514379cc181e 293 Gene3D G3DSA:3.90.550.10 1 263 8.9E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS06190 da983638f038edb6c64d514379cc181e 293 PANTHER PTHR22572:SF105 2 272 1.6E-168 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 R615_RS06560 78becaaf375538ec9a234386df13674f 64 PANTHER PTHR33343 1 64 3.2E-26 T 22-04-2016 R615_RS06560 78becaaf375538ec9a234386df13674f 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 2.6E-25 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 R615_RS06560 78becaaf375538ec9a234386df13674f 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.128 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 R615_RS06560 78becaaf375538ec9a234386df13674f 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 5.2E-21 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 R615_RS06560 78becaaf375538ec9a234386df13674f 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 5.2E-21 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 R615_RS06560 78becaaf375538ec9a234386df13674f 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.2E-21 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 R615_RS06560 78becaaf375538ec9a234386df13674f 64 Pfam PF01632 Ribosomal protein L35 2 61 7.9E-24 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS06560 78becaaf375538ec9a234386df13674f 64 SUPERFAMILY SSF143034 2 62 2.09E-21 T 22-04-2016 R615_RS06560 78becaaf375538ec9a234386df13674f 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS14590 010ff0b0b9365bcda26a3d80ee4dc390 545 Gene3D G3DSA:3.60.21.10 149 473 2.9E-11 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS14590 010ff0b0b9365bcda26a3d80ee4dc390 545 PANTHER PTHR22953:SF28 316 531 3.5E-86 T 22-04-2016 R615_RS14590 010ff0b0b9365bcda26a3d80ee4dc390 545 PANTHER PTHR22953:SF28 197 298 3.5E-86 T 22-04-2016 R615_RS14590 010ff0b0b9365bcda26a3d80ee4dc390 545 PANTHER PTHR22953:SF28 32 177 3.5E-86 T 22-04-2016 R615_RS14590 010ff0b0b9365bcda26a3d80ee4dc390 545 SUPERFAMILY SSF56300 131 477 3.21E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS14590 010ff0b0b9365bcda26a3d80ee4dc390 545 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 35 124 1.5E-23 T 22-04-2016 IPR032093 Phospholipase D, N-terminal R615_RS14590 010ff0b0b9365bcda26a3d80ee4dc390 545 PANTHER PTHR22953 316 531 3.5E-86 T 22-04-2016 R615_RS14590 010ff0b0b9365bcda26a3d80ee4dc390 545 PANTHER PTHR22953 197 298 3.5E-86 T 22-04-2016 R615_RS14590 010ff0b0b9365bcda26a3d80ee4dc390 545 PANTHER PTHR22953 32 177 3.5E-86 T 22-04-2016 R615_RS14590 010ff0b0b9365bcda26a3d80ee4dc390 545 Pfam PF09423 PhoD-like phosphatase 136 469 1.3E-110 T 22-04-2016 IPR018946 Alkaline phosphatase D-related R615_RS09555 bdb147083203f671171507a295a31bd5 164 SUPERFAMILY SSF50475 19 112 5.12E-14 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 R615_RS09555 bdb147083203f671171507a295a31bd5 164 Gene3D G3DSA:2.30.110.10 22 120 4.1E-13 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 R615_RS09555 bdb147083203f671171507a295a31bd5 164 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 20 108 2.0E-9 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 R615_RS13130 1b4f78a25d3b81d561914701ab86926d 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS13130 1b4f78a25d3b81d561914701ab86926d 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS13130 1b4f78a25d3b81d561914701ab86926d 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 5.7E-143 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS13130 1b4f78a25d3b81d561914701ab86926d 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 24.619 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS13130 1b4f78a25d3b81d561914701ab86926d 360 PANTHER PTHR22926:SF5 2 360 3.6E-177 T 22-04-2016 R615_RS13130 1b4f78a25d3b81d561914701ab86926d 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.8E-6 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS13130 1b4f78a25d3b81d561914701ab86926d 360 PANTHER PTHR22926 2 360 3.6E-177 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS13130 1b4f78a25d3b81d561914701ab86926d 360 Pfam PF00953 Glycosyl transferase family 4 99 284 4.3E-37 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS11880 d08393df5f6dc6260a0c4eae60e7ea12 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 138 298 5.9E-51 T 22-04-2016 IPR000160 GGDEF domain R615_RS11880 d08393df5f6dc6260a0c4eae60e7ea12 315 PANTHER PTHR10799:SF750 1 115 3.1E-30 T 22-04-2016 R615_RS11880 d08393df5f6dc6260a0c4eae60e7ea12 315 PANTHER PTHR10799:SF750 170 298 3.1E-30 T 22-04-2016 R615_RS11880 d08393df5f6dc6260a0c4eae60e7ea12 315 Pfam PF00072 Response regulator receiver domain 9 120 3.3E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS11880 d08393df5f6dc6260a0c4eae60e7ea12 315 Gene3D G3DSA:3.40.50.2300 6 131 1.0E-11 T 22-04-2016 R615_RS11880 d08393df5f6dc6260a0c4eae60e7ea12 315 SUPERFAMILY SSF55073 142 299 1.26E-48 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS11880 d08393df5f6dc6260a0c4eae60e7ea12 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 300 1.7E-51 T 22-04-2016 IPR000160 GGDEF domain R615_RS11880 d08393df5f6dc6260a0c4eae60e7ea12 315 SMART SM00267 126 302 4.7E-70 T 22-04-2016 IPR000160 GGDEF domain R615_RS11880 d08393df5f6dc6260a0c4eae60e7ea12 315 PANTHER PTHR10799 1 115 3.1E-30 T 22-04-2016 R615_RS11880 d08393df5f6dc6260a0c4eae60e7ea12 315 PANTHER PTHR10799 170 298 3.1E-30 T 22-04-2016 R615_RS11880 d08393df5f6dc6260a0c4eae60e7ea12 315 SUPERFAMILY SSF52172 3 136 6.83E-14 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS11880 d08393df5f6dc6260a0c4eae60e7ea12 315 Gene3D G3DSA:3.30.70.270 139 300 1.0E-53 T 22-04-2016 R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 SUPERFAMILY SSF55073 436 590 1.18E-41 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 SMART SM00091 303 369 1.4E-6 T 22-04-2016 IPR000014 PAS domain R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 PANTHER PTHR10799:SF750 87 234 1.2E-22 T 22-04-2016 R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 PANTHER PTHR10799:SF750 464 593 1.2E-22 T 22-04-2016 R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 Pfam PF00990 Diguanylate cyclase, GGDEF domain 433 587 8.8E-38 T 22-04-2016 IPR000160 GGDEF domain R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 SMART SM00267 420 591 2.7E-47 T 22-04-2016 IPR000160 GGDEF domain R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 Gene3D G3DSA:3.30.450.20 301 412 1.2E-10 T 22-04-2016 R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 305 409 5.8E-6 T 22-04-2016 IPR000014 PAS domain R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 429 591 2.5E-45 T 22-04-2016 IPR000160 GGDEF domain R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 PANTHER PTHR10799 87 234 1.2E-22 T 22-04-2016 R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 PANTHER PTHR10799 464 593 1.2E-22 T 22-04-2016 R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 SUPERFAMILY SSF55785 303 412 1.31E-10 T 22-04-2016 IPR000014 PAS domain R615_RS04045 47d9a257d7b58896d326ecee45f7f9c7 597 Gene3D G3DSA:3.30.70.270 432 592 9.5E-47 T 22-04-2016 R615_RS10585 675b5c089e148041b574456073a8c177 375 Gene3D G3DSA:3.40.630.10 316 374 4.6E-70 T 22-04-2016 R615_RS10585 675b5c089e148041b574456073a8c177 375 Gene3D G3DSA:3.40.630.10 4 187 4.6E-70 T 22-04-2016 R615_RS10585 675b5c089e148041b574456073a8c177 375 SUPERFAMILY SSF55031 179 288 3.29E-31 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain R615_RS10585 675b5c089e148041b574456073a8c177 375 SUPERFAMILY SSF53187 4 178 4.19E-63 T 22-04-2016 R615_RS10585 675b5c089e148041b574456073a8c177 375 SUPERFAMILY SSF53187 292 374 4.19E-63 T 22-04-2016 R615_RS10585 675b5c089e148041b574456073a8c177 375 Gene3D G3DSA:3.30.70.360 188 288 1.4E-35 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain R615_RS10585 675b5c089e148041b574456073a8c177 375 Pfam PF01546 Peptidase family M20/M25/M40 62 372 1.1E-45 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 R615_RS10585 675b5c089e148041b574456073a8c177 375 Pfam PF07687 Peptidase dimerisation domain 175 282 1.8E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain R615_RS10585 675b5c089e148041b574456073a8c177 375 PANTHER PTHR11014:SF106 3 374 7.4E-98 T 22-04-2016 R615_RS10585 675b5c089e148041b574456073a8c177 375 PANTHER PTHR11014 3 374 7.4E-98 T 22-04-2016 R615_RS10585 675b5c089e148041b574456073a8c177 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 3.8E-172 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 R615_RS10585 675b5c089e148041b574456073a8c177 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 135 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 R615_RS10585 675b5c089e148041b574456073a8c177 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 52.745 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 R615_RS03955 666bc8bc44d614dbddc4bd62896ed63d 324 Gene3D G3DSA:2.30.130.10 257 318 2.1E-6 T 22-04-2016 IPR015947 PUA-like domain R615_RS03955 666bc8bc44d614dbddc4bd62896ed63d 324 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 193 254 7.0E-19 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal R615_RS03955 666bc8bc44d614dbddc4bd62896ed63d 324 SUPERFAMILY SSF55120 14 234 1.09E-71 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS03955 666bc8bc44d614dbddc4bd62896ed63d 324 PANTHER PTHR13767 3 316 2.9E-114 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS03955 666bc8bc44d614dbddc4bd62896ed63d 324 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 36 192 1.6E-50 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 R615_RS03955 666bc8bc44d614dbddc4bd62896ed63d 324 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 259 316 1.7E-9 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS03955 666bc8bc44d614dbddc4bd62896ed63d 324 PANTHER PTHR13767:SF2 3 316 2.9E-114 T 22-04-2016 R615_RS03955 666bc8bc44d614dbddc4bd62896ed63d 324 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 14 316 17.822 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS03955 666bc8bc44d614dbddc4bd62896ed63d 324 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 15 231 3.1E-71 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS02455 1391e08c1f2a6c2d8798f73874e6657c 396 SUPERFAMILY SSF117892 119 255 3.53E-24 T 22-04-2016 IPR001107 Band 7 domain R615_RS02455 1391e08c1f2a6c2d8798f73874e6657c 396 PANTHER PTHR10264 4 391 5.5E-145 T 22-04-2016 IPR001972 Stomatin family GO:0016020 R615_RS02455 1391e08c1f2a6c2d8798f73874e6657c 396 TIGRFAM TIGR01933 hflK: HflK protein 90 350 1.6E-104 T 22-04-2016 IPR010201 HflK GO:0016021 R615_RS02455 1391e08c1f2a6c2d8798f73874e6657c 396 SMART SM00244 88 248 1.6E-32 T 22-04-2016 IPR001107 Band 7 domain R615_RS02455 1391e08c1f2a6c2d8798f73874e6657c 396 Pfam PF12221 Bacterial membrane protein N terminal 1 54 4.7E-14 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal R615_RS02455 1391e08c1f2a6c2d8798f73874e6657c 396 PRINTS PR00721 Stomatin signature 95 117 1.56E-8 T 22-04-2016 IPR001972 Stomatin family GO:0016020 R615_RS02455 1391e08c1f2a6c2d8798f73874e6657c 396 PRINTS PR00721 Stomatin signature 224 242 1.56E-8 T 22-04-2016 IPR001972 Stomatin family GO:0016020 R615_RS02455 1391e08c1f2a6c2d8798f73874e6657c 396 PRINTS PR00721 Stomatin signature 142 163 1.56E-8 T 22-04-2016 IPR001972 Stomatin family GO:0016020 R615_RS02455 1391e08c1f2a6c2d8798f73874e6657c 396 Pfam PF01145 SPFH domain / Band 7 family 92 264 1.1E-29 T 22-04-2016 IPR001107 Band 7 domain R615_RS02455 1391e08c1f2a6c2d8798f73874e6657c 396 PANTHER PTHR10264:SF51 4 391 5.5E-145 T 22-04-2016 IPR010201 HflK GO:0016021 R615_RS11820 0f4a092088766a713902875101d3b4b9 215 PANTHER PTHR24220 13 200 4.5E-78 T 22-04-2016 R615_RS11820 0f4a092088766a713902875101d3b4b9 215 SMART SM00382 36 214 1.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS11820 0f4a092088766a713902875101d3b4b9 215 SUPERFAMILY SSF52540 8 197 6.15E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11820 0f4a092088766a713902875101d3b4b9 215 Gene3D G3DSA:3.40.50.300 5 197 6.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11820 0f4a092088766a713902875101d3b4b9 215 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 12 210 5.0E-71 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 R615_RS11820 0f4a092088766a713902875101d3b4b9 215 Pfam PF00005 ABC transporter 28 166 1.9E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS11820 0f4a092088766a713902875101d3b4b9 215 PANTHER PTHR24220:SF508 13 200 4.5E-78 T 22-04-2016 R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 SMART SM00332 2 237 1.6E-16 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 SUPERFAMILY SSF81606 5 243 2.22E-46 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 Gene3D G3DSA:1.10.510.10 370 530 5.5E-34 T 22-04-2016 R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 SMART SM00331 24 239 2.9E-8 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 PANTHER PTHR24362 85 533 1.5E-51 T 22-04-2016 R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 SMART SM00220 272 537 7.0E-15 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 PANTHER PTHR24362:SF160 85 533 1.5E-51 T 22-04-2016 R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 Gene3D G3DSA:3.60.40.10 5 239 6.2E-42 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 Gene3D G3DSA:3.30.200.20 268 369 3.5E-13 T 22-04-2016 R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 SUPERFAMILY SSF56112 253 535 2.02E-55 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 391 403 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 Pfam PF13672 Protein phosphatase 2C 21 206 2.8E-10 T 22-04-2016 R615_RS00190 412104be4fc248a68d54082f7fdd56f5 575 Pfam PF00069 Protein kinase domain 282 522 1.1E-35 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 R615_RS13195 bb0ae01253503f1cc8eca667f406105d 196 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 72 171 9.9E-5 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 R615_RS13195 bb0ae01253503f1cc8eca667f406105d 196 SUPERFAMILY SSF56925 36 196 1.1E-22 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS13195 bb0ae01253503f1cc8eca667f406105d 196 Gene3D G3DSA:2.40.160.20 10 196 5.6E-26 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS13195 bb0ae01253503f1cc8eca667f406105d 196 Pfam PF13505 Outer membrane protein beta-barrel domain 10 196 4.3E-20 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 PANTHER PTHR24322 11 139 3.2E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 PANTHER PTHR24322 155 189 3.2E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 Pfam PF00106 short chain dehydrogenase 7 199 6.1E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 Gene3D G3DSA:3.40.50.720 6 268 2.6E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 SUPERFAMILY SSF51735 1 274 7.75E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 9.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.2E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 PANTHER PTHR24322:SF365 11 139 3.2E-62 T 22-04-2016 R615_RS14545 02aec414fa92f1264f8ff3abe13af913 284 PANTHER PTHR24322:SF365 155 189 3.2E-62 T 22-04-2016 R615_RS15050 b48865d2776b9e5b39b285a931226f5b 496 SUPERFAMILY SSF48179 211 370 1.7E-40 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS15050 b48865d2776b9e5b39b285a931226f5b 496 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 36 205 1.4E-59 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS15050 b48865d2776b9e5b39b285a931226f5b 496 SUPERFAMILY SSF48179 350 488 3.23E-43 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS15050 b48865d2776b9e5b39b285a931226f5b 496 PANTHER PTHR21371 1 496 5.7E-192 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS15050 b48865d2776b9e5b39b285a931226f5b 496 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 23 489 37.359 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS15050 b48865d2776b9e5b39b285a931226f5b 496 Gene3D G3DSA:3.40.50.720 3 202 4.7E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS15050 b48865d2776b9e5b39b285a931226f5b 496 SUPERFAMILY SSF51735 30 210 1.74E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS15050 b48865d2776b9e5b39b285a931226f5b 496 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 36 368 3.6E-120 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS15050 b48865d2776b9e5b39b285a931226f5b 496 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 211 343 1.8E-27 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS15050 b48865d2776b9e5b39b285a931226f5b 496 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 359 486 2.2E-17 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS15050 b48865d2776b9e5b39b285a931226f5b 496 Gene3D G3DSA:1.10.1040.10 361 485 1.1E-15 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 SUPERFAMILY SSF48403 31 424 7.83E-64 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 Pfam PF12796 Ankyrin repeats (3 copies) 317 410 2.6E-6 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 Pfam PF12796 Ankyrin repeats (3 copies) 98 188 7.0E-14 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 PANTHER PTHR24123 22 285 1.1E-72 T 22-04-2016 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 PANTHER PTHR24123 304 421 1.1E-72 T 22-04-2016 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 PRINTS PR01415 Ankyrin repeat signature 160 175 4.466757E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 PRINTS PR01415 Ankyrin repeat signature 274 288 4.466757E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 Gene3D G3DSA:1.25.40.20 22 426 1.3E-85 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 Pfam PF13637 Ankyrin repeats (many copies) 226 279 1.1E-6 T 22-04-2016 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 SMART SM00248 159 188 1.5E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 SMART SM00248 310 339 2.2 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 SMART SM00248 192 221 33.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 SMART SM00248 126 155 44.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 SMART SM00248 376 409 6.5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 SMART SM00248 59 88 3.3E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 SMART SM00248 225 254 100.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 SMART SM00248 26 55 860.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 SMART SM00248 93 122 2.7E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 SMART SM00248 258 287 0.017 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS09050 72824764872ee46c3b2ae93e13ecf213 444 Pfam PF00023 Ankyrin repeat 59 90 0.0035 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 R615_RS06080 6aaf3f01a466d05babe175f01ecd3f34 383 Pfam PF02706 Chain length determinant protein 12 94 1.1E-7 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 R615_RS06080 6aaf3f01a466d05babe175f01ecd3f34 383 Pfam PF13807 G-rich domain on putative tyrosine kinase 323 358 2.3E-7 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain R615_RS06080 6aaf3f01a466d05babe175f01ecd3f34 383 SUPERFAMILY SSF160355 96 325 5.76E-22 T 22-04-2016 R615_RS06080 6aaf3f01a466d05babe175f01ecd3f34 383 Gene3D G3DSA:3.30.1890.10 160 260 1.5E-5 T 22-04-2016 R615_RS16980 826db81208e4943c3c458cd1bb9b768a 299 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 299 15.201 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 R615_RS16980 826db81208e4943c3c458cd1bb9b768a 299 PANTHER PTHR11410:SF7 42 299 1.6E-81 T 22-04-2016 R615_RS16980 826db81208e4943c3c458cd1bb9b768a 299 Gene3D G3DSA:1.20.120.220 115 299 4.8E-52 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 R615_RS16980 826db81208e4943c3c458cd1bb9b768a 299 ProSitePatterns PS00449 ATP synthase a subunit signature. 229 238 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site R615_RS16980 826db81208e4943c3c458cd1bb9b768a 299 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 59 294 1.2E-41 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 R615_RS16980 826db81208e4943c3c458cd1bb9b768a 299 PANTHER PTHR11410 42 299 1.6E-81 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 R615_RS16980 826db81208e4943c3c458cd1bb9b768a 299 Pfam PF00119 ATP synthase A chain 67 293 2.8E-54 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 R615_RS16980 826db81208e4943c3c458cd1bb9b768a 299 SUPERFAMILY SSF81336 114 293 3.66E-39 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 R615_RS11715 a64fc3fb38b602fbaae0c2b647fac697 599 Gene3D G3DSA:3.10.580.10 151 262 1.9E-19 T 22-04-2016 R615_RS11715 a64fc3fb38b602fbaae0c2b647fac697 599 Gene3D G3DSA:2.60.120.10 10 127 1.7E-10 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS11715 a64fc3fb38b602fbaae0c2b647fac697 599 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 459 593 1.2E-34 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding R615_RS11715 a64fc3fb38b602fbaae0c2b647fac697 599 SUPERFAMILY SSF54631 149 261 3.54E-18 T 22-04-2016 R615_RS11715 a64fc3fb38b602fbaae0c2b647fac697 599 Pfam PF03445 Putative nucleotidyltransferase DUF294 287 418 1.1E-37 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 R615_RS11715 a64fc3fb38b602fbaae0c2b647fac697 599 Pfam PF00571 CBS domain 151 198 8.7E-4 T 22-04-2016 IPR000644 CBS domain R615_RS11715 a64fc3fb38b602fbaae0c2b647fac697 599 SMART SM00100 11 127 3.7E-4 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS11715 a64fc3fb38b602fbaae0c2b647fac697 599 SUPERFAMILY SSF51206 9 126 1.17E-15 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like R615_RS11715 a64fc3fb38b602fbaae0c2b647fac697 599 Pfam PF00027 Cyclic nucleotide-binding domain 31 111 1.6E-8 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS11715 a64fc3fb38b602fbaae0c2b647fac697 599 SMART SM00116 152 198 0.06 T 22-04-2016 IPR000644 CBS domain R615_RS11715 a64fc3fb38b602fbaae0c2b647fac697 599 SMART SM00116 215 262 0.021 T 22-04-2016 IPR000644 CBS domain R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 PANTHER PTHR23135:SF5 3 454 1.1E-217 T 22-04-2016 R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 Gene3D G3DSA:3.90.190.20 316 464 5.3E-53 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 Gene3D G3DSA:3.40.50.720 11 96 1.2E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 SUPERFAMILY SSF53244 313 463 1.83E-47 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 SUPERFAMILY SSF53623 94 311 3.66E-73 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 SUPERFAMILY SSF51984 11 95 4.71E-28 T 22-04-2016 R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 Pfam PF08245 Mur ligase middle domain 113 294 9.7E-30 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 Pfam PF01225 Mur ligase family, catalytic domain 11 107 2.0E-27 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 Gene3D G3DSA:3.40.1190.10 97 315 3.5E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 11 456 1.1E-170 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 404 2.3E-23 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 PANTHER PTHR23135 3 454 1.1E-217 T 22-04-2016 R615_RS13110 6e027d21628d48f36f6d2eff8e5e7854 473 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 8 466 42.971 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS07000 8f46be22214b44189e91f9b77750ef5b 171 SUPERFAMILY SSF54637 15 135 4.6E-28 T 22-04-2016 IPR029069 HotDog domain R615_RS07000 8f46be22214b44189e91f9b77750ef5b 171 Gene3D G3DSA:3.10.129.10 13 157 2.5E-27 T 22-04-2016 IPR029069 HotDog domain R615_RS07000 8f46be22214b44189e91f9b77750ef5b 171 PANTHER PTHR12418:SF28 17 171 4.4E-28 T 22-04-2016 R615_RS07000 8f46be22214b44189e91f9b77750ef5b 171 Pfam PF03061 Thioesterase superfamily 57 130 1.2E-13 T 22-04-2016 IPR006683 Thioesterase domain R615_RS07000 8f46be22214b44189e91f9b77750ef5b 171 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 133 8.6E-17 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain R615_RS07000 8f46be22214b44189e91f9b77750ef5b 171 PANTHER PTHR12418 17 171 4.4E-28 T 22-04-2016 R615_RS07895 cf36df7241e11a194d3531914e68f19d 363 Pfam PF12833 Helix-turn-helix domain 281 358 3.0E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS07895 cf36df7241e11a194d3531914e68f19d 363 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 325 340 8.1E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS07895 cf36df7241e11a194d3531914e68f19d 363 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 340 356 8.1E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS07895 cf36df7241e11a194d3531914e68f19d 363 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 50 226 3.5E-28 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS07895 cf36df7241e11a194d3531914e68f19d 363 PANTHER PTHR11019:SF52 257 359 2.4E-23 T 22-04-2016 R615_RS07895 cf36df7241e11a194d3531914e68f19d 363 Gene3D G3DSA:1.10.10.60 313 357 9.5E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS07895 cf36df7241e11a194d3531914e68f19d 363 SUPERFAMILY SSF46689 310 358 1.56E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS07895 cf36df7241e11a194d3531914e68f19d 363 PANTHER PTHR11019 257 359 2.4E-23 T 22-04-2016 R615_RS07895 cf36df7241e11a194d3531914e68f19d 363 SMART SM00342 274 356 6.3E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS16165 44c70e3ef9dd787983429902b1bf9ab5 82 SUPERFAMILY SSF54285 1 82 2.43E-14 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp R615_RS16165 44c70e3ef9dd787983429902b1bf9ab5 82 Pfam PF02597 ThiS family 3 82 2.9E-10 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 R615_RS16165 44c70e3ef9dd787983429902b1bf9ab5 82 Gene3D G3DSA:3.10.20.30 1 82 1.1E-17 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS16165 44c70e3ef9dd787983429902b1bf9ab5 82 PANTHER PTHR33359 1 82 8.4E-17 T 22-04-2016 R615_RS12550 d66b6816c4c496cadb789dba013355e5 195 SUPERFAMILY SSF88946 5 108 1.96E-30 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS12550 d66b6816c4c496cadb789dba013355e5 195 PANTHER PTHR30173 1 188 4.4E-50 T 22-04-2016 R615_RS12550 d66b6816c4c496cadb789dba013355e5 195 Gene3D G3DSA:1.10.10.10 125 189 5.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS12550 d66b6816c4c496cadb789dba013355e5 195 Pfam PF04542 Sigma-70 region 2 26 93 1.5E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS12550 d66b6816c4c496cadb789dba013355e5 195 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 4 191 1.7E-93 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS12550 d66b6816c4c496cadb789dba013355e5 195 Gene3D G3DSA:1.10.1740.10 4 111 1.3E-35 T 22-04-2016 R615_RS12550 d66b6816c4c496cadb789dba013355e5 195 SUPERFAMILY SSF88659 124 187 5.42E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS12550 d66b6816c4c496cadb789dba013355e5 195 Pfam PF08281 Sigma-70, region 4 135 182 5.6E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS12550 d66b6816c4c496cadb789dba013355e5 195 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 187 5.9E-31 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 PANTHER PTHR30218:SF0 2 696 0.0 T 22-04-2016 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 SUPERFAMILY SSF143724 122 327 1.96E-66 T 22-04-2016 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 Pfam PF02503 Polyphosphate kinase middle domain 133 335 1.8E-63 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 SUPERFAMILY SSF140356 16 120 1.02E-35 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 PANTHER PTHR30218 2 696 0.0 T 22-04-2016 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 18 692 6.4E-280 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 Pfam PF13089 Polyphosphate kinase N-terminal domain 19 124 2.9E-34 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 SUPERFAMILY SSF56024 328 509 7.06E-56 T 22-04-2016 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 SUPERFAMILY SSF56024 514 693 7.85E-69 T 22-04-2016 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 Gene3D G3DSA:3.30.1840.10 122 313 7.1E-72 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 Gene3D G3DSA:3.30.870.10 328 513 9.4E-73 T 22-04-2016 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 PIRSF PIRSF015589 2 699 8.1E-276 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 Pfam PF13090 Polyphosphate kinase C-terminal domain 344 691 1.4E-149 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 Hamap MF_00347 Polyphosphate kinase [ppk]. 16 695 33.258 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 R615_RS16345 91f3b730b1a7ae4a9d75523eeafee47b 699 Gene3D G3DSA:3.30.870.10 514 695 1.5E-71 T 22-04-2016 R615_RS03490 7b32d05fc65969b84344f1fa8dffef70 469 SUPERFAMILY SSF103473 20 467 3.66E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS03490 7b32d05fc65969b84344f1fa8dffef70 469 Pfam PF07690 Major Facilitator Superfamily 28 422 2.3E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 R615_RS03490 7b32d05fc65969b84344f1fa8dffef70 469 Gene3D G3DSA:1.20.1250.20 265 464 1.6E-12 T 22-04-2016 R615_RS03490 7b32d05fc65969b84344f1fa8dffef70 469 Gene3D G3DSA:1.20.1250.20 19 217 2.8E-14 T 22-04-2016 R615_RS03490 7b32d05fc65969b84344f1fa8dffef70 469 PANTHER PTHR12778 6 457 1.2E-80 T 22-04-2016 R615_RS06135 2e42ecef3e3d23bf4a9e4b16f5d524bc 107 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 20 96 1.6E-7 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS06135 2e42ecef3e3d23bf4a9e4b16f5d524bc 107 SMART SM00984 19 106 1.5E-5 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS06135 2e42ecef3e3d23bf4a9e4b16f5d524bc 107 PANTHER PTHR11374:SF17 17 83 4.0E-25 T 22-04-2016 R615_RS06135 2e42ecef3e3d23bf4a9e4b16f5d524bc 107 SUPERFAMILY SSF52413 13 106 1.06E-21 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS06135 2e42ecef3e3d23bf4a9e4b16f5d524bc 107 PANTHER PTHR11374 17 83 4.0E-25 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 R615_RS06135 2e42ecef3e3d23bf4a9e4b16f5d524bc 107 Gene3D G3DSA:3.40.50.720 16 107 9.4E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04885 5604767f58bb4b01f4dac2fa29ba3d2f 729 Pfam PF02706 Chain length determinant protein 10 181 1.4E-21 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 R615_RS04885 5604767f58bb4b01f4dac2fa29ba3d2f 729 PANTHER PTHR32309 8 726 3.4E-157 T 22-04-2016 R615_RS04885 5604767f58bb4b01f4dac2fa29ba3d2f 729 SUPERFAMILY SSF52540 530 714 2.0E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04885 5604767f58bb4b01f4dac2fa29ba3d2f 729 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 512 714 3.1E-48 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 R615_RS04885 5604767f58bb4b01f4dac2fa29ba3d2f 729 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 541 708 9.2E-10 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain R615_RS04885 5604767f58bb4b01f4dac2fa29ba3d2f 729 PANTHER PTHR32309:SF13 8 726 3.4E-157 T 22-04-2016 R615_RS04885 5604767f58bb4b01f4dac2fa29ba3d2f 729 Pfam PF13807 G-rich domain on putative tyrosine kinase 383 451 6.9E-16 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain R615_RS04885 5604767f58bb4b01f4dac2fa29ba3d2f 729 Gene3D G3DSA:3.40.50.300 530 709 4.3E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12765 2dc478ab847e752b83a04cdac07b6fe5 487 Gene3D G3DSA:2.120.10.30 190 374 1.6E-5 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like R615_RS12765 2dc478ab847e752b83a04cdac07b6fe5 487 SUPERFAMILY SSF63829 185 376 1.01E-7 T 22-04-2016 R615_RS12765 2dc478ab847e752b83a04cdac07b6fe5 487 Pfam PF13449 Esterase-like activity of phytase 74 451 1.6E-54 T 22-04-2016 IPR027372 Phytase-like domain R615_RS12765 2dc478ab847e752b83a04cdac07b6fe5 487 PANTHER PTHR37957 76 380 3.8E-19 T 22-04-2016 R615_RS02245 58e971b97c8860e6b18f304dadbc2b20 233 PANTHER PTHR32125 7 233 1.3E-64 T 22-04-2016 R615_RS02245 58e971b97c8860e6b18f304dadbc2b20 233 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS02245 58e971b97c8860e6b18f304dadbc2b20 233 Gene3D G3DSA:3.90.550.10 6 231 2.4E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS02245 58e971b97c8860e6b18f304dadbc2b20 233 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 231 4.0E-64 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS02245 58e971b97c8860e6b18f304dadbc2b20 233 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 3 232 28.879 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS02245 58e971b97c8860e6b18f304dadbc2b20 233 SUPERFAMILY SSF53448 5 229 5.41E-55 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS02245 58e971b97c8860e6b18f304dadbc2b20 233 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 229 9.7E-64 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS02245 58e971b97c8860e6b18f304dadbc2b20 233 PANTHER PTHR32125:SF4 7 233 1.3E-64 T 22-04-2016 R615_RS11640 f0108c7be3953e255d513522c5df8a88 311 PANTHER PTHR10992:SF851 87 276 2.0E-53 T 22-04-2016 R615_RS11640 f0108c7be3953e255d513522c5df8a88 311 PANTHER PTHR10992 87 276 2.0E-53 T 22-04-2016 R615_RS11640 f0108c7be3953e255d513522c5df8a88 311 SUPERFAMILY SSF53474 3 292 1.1E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS11640 f0108c7be3953e255d513522c5df8a88 311 PANTHER PTHR10992:SF851 9 68 2.0E-53 T 22-04-2016 R615_RS11640 f0108c7be3953e255d513522c5df8a88 311 Pfam PF00561 alpha/beta hydrolase fold 24 275 1.2E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS11640 f0108c7be3953e255d513522c5df8a88 311 Gene3D G3DSA:3.40.50.1820 5 291 3.2E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS11640 f0108c7be3953e255d513522c5df8a88 311 PANTHER PTHR10992 9 68 2.0E-53 T 22-04-2016 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 Pfam PF03483 B3/4 domain 211 384 1.3E-68 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 Gene3D G3DSA:2.40.50.140 40 153 1.0E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 784 45.541 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 SMART SM00873 211 384 2.1E-95 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 Gene3D G3DSA:3.30.56.10 1 38 1.5E-26 T 22-04-2016 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 Gene3D G3DSA:3.30.56.10 154 182 1.5E-26 T 22-04-2016 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 Pfam PF01588 Putative tRNA binding domain 45 144 1.2E-23 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 Gene3D G3DSA:3.30.70.380 699 790 3.2E-30 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 SUPERFAMILY SSF55681 466 685 2.04E-52 T 22-04-2016 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 SUPERFAMILY SSF46955 404 474 3.57E-16 T 22-04-2016 IPR009061 Putative DNA-binding domain R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 PANTHER PTHR10947:SF0 2 790 1.2E-303 T 22-04-2016 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 PANTHER PTHR10947 2 790 1.2E-303 T 22-04-2016 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 SMART SM00874 402 470 3.1E-25 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 SUPERFAMILY SSF54991 692 790 8.76E-30 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 Gene3D G3DSA:3.50.40.10 198 391 7.1E-81 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 Gene3D G3DSA:3.30.56.20 403 474 4.2E-23 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 Pfam PF03147 Ferredoxin-fold anticodon binding domain 697 790 2.7E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 Gene3D G3DSA:3.30.930.10 494 685 2.8E-62 T 22-04-2016 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 Pfam PF03484 tRNA synthetase B5 domain 404 470 6.6E-17 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 SUPERFAMILY SSF50249 38 189 6.12E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 SUPERFAMILY SSF56037 198 394 3.14E-73 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 790 3.1E-265 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 R615_RS06575 29c85443df38f508e3759b03308f1d2b 791 SMART SM00896 697 790 1.6E-41 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 R615_RS07745 327ec845ca935819669e040db70376ad 905 Gene3D G3DSA:3.40.1060.10 249 366 2.3E-31 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PRINTS PR00415 Aconitase family signature 202 215 2.1E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PRINTS PR00415 Aconitase family signature 216 231 2.1E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PRINTS PR00415 Aconitase family signature 149 162 2.1E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PRINTS PR00415 Aconitase family signature 436 447 2.1E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PRINTS PR00415 Aconitase family signature 294 307 2.1E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PRINTS PR00415 Aconitase family signature 371 385 2.1E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PRINTS PR00415 Aconitase family signature 498 511 2.1E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PRINTS PR00415 Aconitase family signature 280 293 2.1E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PRINTS PR00415 Aconitase family signature 173 181 2.1E-39 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PANTHER PTHR11670 761 904 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PANTHER PTHR11670 674 719 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PANTHER PTHR11670 1 392 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 PANTHER PTHR11670 421 656 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 SUPERFAMILY SSF52016 636 900 4.32E-66 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel R615_RS07745 327ec845ca935819669e040db70376ad 905 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 22 901 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 R615_RS07745 327ec845ca935819669e040db70376ad 905 ProSitePatterns PS01244 Aconitase family signature 2. 498 511 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 SUPERFAMILY SSF53732 18 631 8.24E-192 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 Gene3D G3DSA:3.20.19.10 642 900 2.8E-63 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel R615_RS07745 327ec845ca935819669e040db70376ad 905 PANTHER PTHR11670:SF1 761 904 0.0 T 22-04-2016 R615_RS07745 327ec845ca935819669e040db70376ad 905 PANTHER PTHR11670:SF1 674 719 0.0 T 22-04-2016 R615_RS07745 327ec845ca935819669e040db70376ad 905 PANTHER PTHR11670:SF1 1 392 0.0 T 22-04-2016 R615_RS07745 327ec845ca935819669e040db70376ad 905 PANTHER PTHR11670:SF1 421 656 0.0 T 22-04-2016 R615_RS07745 327ec845ca935819669e040db70376ad 905 Pfam PF00330 Aconitase family (aconitate hydratase) 71 567 3.0E-158 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 Gene3D G3DSA:3.30.499.10 26 248 7.1E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 Pfam PF00694 Aconitase C-terminal domain 700 829 2.1E-37 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 Gene3D G3DSA:3.30.499.10 424 580 1.7E-56 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS07745 327ec845ca935819669e040db70376ad 905 Gene3D G3DSA:3.30.499.10 367 392 1.7E-56 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS04615 6345e6a4a84d8eb2a9051f5bc15c72f4 135 Pfam PF00460 Flagella basal body rod protein 12 40 5.2E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 R615_RS04615 6345e6a4a84d8eb2a9051f5bc15c72f4 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 133 1.3E-38 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 R615_RS04615 6345e6a4a84d8eb2a9051f5bc15c72f4 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 16 36 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site R615_RS04615 6345e6a4a84d8eb2a9051f5bc15c72f4 135 PANTHER PTHR30435 3 135 7.9E-43 T 22-04-2016 R615_RS04615 6345e6a4a84d8eb2a9051f5bc15c72f4 135 PIRSF PIRSF002889 1 135 4.3E-45 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 R615_RS04615 6345e6a4a84d8eb2a9051f5bc15c72f4 135 PANTHER PTHR30435:SF12 3 135 7.9E-43 T 22-04-2016 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 9.7E-92 T 22-04-2016 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 9.7E-92 T 22-04-2016 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 9.7E-92 T 22-04-2016 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 9.7E-92 T 22-04-2016 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 9.7E-92 T 22-04-2016 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 9.7E-92 T 22-04-2016 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 9.7E-92 T 22-04-2016 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 9.7E-92 T 22-04-2016 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 9.7E-92 T 22-04-2016 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 ProSitePatterns PS00756 Protein secY signature 2. 168 185 - T 22-04-2016 IPR030659 SecY conserved site R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 428 29.06 T 22-04-2016 IPR026593 Protein translocase subunit SecY R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 SUPERFAMILY SSF103491 15 419 6.41E-131 T 22-04-2016 IPR023201 SecY subunit domain R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 PIRSF PIRSF004557 8 435 8.8E-122 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 PANTHER PTHR10906 16 440 1.7E-218 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 Pfam PF00344 SecY translocase 75 412 3.2E-116 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 424 5.5E-133 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 Gene3D G3DSA:1.10.3370.10 15 432 4.0E-161 T 22-04-2016 IPR023201 SecY subunit domain R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 22-04-2016 IPR030659 SecY conserved site R615_RS15775 60aa966604d95636a385d4fa5b33707d 440 PANTHER PTHR10906:SF2 16 440 1.7E-218 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 PANTHER PTHR19375:SF182 90 274 2.3E-108 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 PANTHER PTHR19375:SF182 327 448 2.3E-108 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 PANTHER PTHR19375:SF182 1 45 2.3E-108 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 PANTHER PTHR19375 90 274 2.3E-108 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 PANTHER PTHR19375 327 448 2.3E-108 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 PANTHER PTHR19375 1 45 2.3E-108 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 SUPERFAMILY SSF53067 89 209 6.8E-23 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 SUPERFAMILY SSF53067 1 45 6.8E-23 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 SUPERFAMILY SSF53067 213 281 1.48E-30 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 SUPERFAMILY SSF53067 333 452 1.48E-30 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 Gene3D G3DSA:3.30.420.40 224 246 5.2E-14 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 Gene3D G3DSA:3.30.420.40 379 438 5.2E-14 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 Pfam PF00012 Hsp70 protein 132 234 5.5E-8 T 22-04-2016 IPR013126 Heat shock protein 70 family R615_RS05855 400eed67344a7af25922489e1cae3a04 455 Pfam PF00012 Hsp70 protein 331 447 1.7E-5 T 22-04-2016 IPR013126 Heat shock protein 70 family R615_RS05855 400eed67344a7af25922489e1cae3a04 455 Gene3D G3DSA:3.30.420.40 1 44 6.4E-26 T 22-04-2016 R615_RS05855 400eed67344a7af25922489e1cae3a04 455 Gene3D G3DSA:3.30.420.40 90 223 6.4E-26 T 22-04-2016 R615_RS02070 9d505ebac384467b00f7de2c03386a05 152 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 5 146 1.4E-43 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- R615_RS02070 9d505ebac384467b00f7de2c03386a05 152 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 8 146 1.6E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- R615_RS02070 9d505ebac384467b00f7de2c03386a05 152 Gene3D G3DSA:3.40.930.10 3 146 1.2E-41 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- R615_RS02070 9d505ebac384467b00f7de2c03386a05 152 SUPERFAMILY SSF55804 3 146 2.35E-38 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 R615_RS02070 9d505ebac384467b00f7de2c03386a05 152 PANTHER PTHR30505:SF6 1 146 2.5E-53 T 22-04-2016 R615_RS02070 9d505ebac384467b00f7de2c03386a05 152 PANTHER PTHR30505 1 146 2.5E-53 T 22-04-2016 R615_RS05845 c4a2c3e2b538017203fffb186aeb4e41 201 PANTHER PTHR11592:SF31 43 192 3.0E-49 T 22-04-2016 R615_RS05845 c4a2c3e2b538017203fffb186aeb4e41 201 SUPERFAMILY SSF52833 52 199 1.46E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS05845 c4a2c3e2b538017203fffb186aeb4e41 201 PANTHER PTHR11592 43 192 3.0E-49 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 R615_RS05845 c4a2c3e2b538017203fffb186aeb4e41 201 PRINTS PR01011 Glutathione peroxidase family signature 71 88 6.5E-6 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 R615_RS05845 c4a2c3e2b538017203fffb186aeb4e41 201 PRINTS PR01011 Glutathione peroxidase family signature 106 122 6.5E-6 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 R615_RS05845 c4a2c3e2b538017203fffb186aeb4e41 201 PRINTS PR01011 Glutathione peroxidase family signature 165 174 6.5E-6 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 R615_RS05845 c4a2c3e2b538017203fffb186aeb4e41 201 Gene3D G3DSA:3.40.30.10 52 199 3.8E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS05845 c4a2c3e2b538017203fffb186aeb4e41 201 ProSitePatterns PS00460 Glutathione peroxidases active site. 73 88 - T 22-04-2016 IPR029759 Glutathione peroxidase active site R615_RS05845 c4a2c3e2b538017203fffb186aeb4e41 201 Pfam PF00255 Glutathione peroxidase 63 156 9.2E-20 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 R615_RS14875 35e5d92add5f9b2ff35b4b5bafc36637 123 Pfam PF03334 Na+/H+ antiporter subunit 16 96 1.3E-24 T 22-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 R615_RS14875 35e5d92add5f9b2ff35b4b5bafc36637 123 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 16 103 4.1E-27 T 22-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 R615_RS14875 35e5d92add5f9b2ff35b4b5bafc36637 123 PANTHER PTHR34703 6 97 1.8E-30 T 22-04-2016 R615_RS14875 35e5d92add5f9b2ff35b4b5bafc36637 123 PANTHER PTHR34703:SF1 6 97 1.8E-30 T 22-04-2016 R615_RS06070 4341d1d1a392ca46b6078afbc9aa2b55 439 Gene3D G3DSA:3.20.20.140 67 370 4.4E-96 T 22-04-2016 R615_RS06070 4341d1d1a392ca46b6078afbc9aa2b55 439 PANTHER PTHR11271 1 438 1.9E-168 T 22-04-2016 R615_RS06070 4341d1d1a392ca46b6078afbc9aa2b55 439 SUPERFAMILY SSF51556 64 363 1.02E-95 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS06070 4341d1d1a392ca46b6078afbc9aa2b55 439 SUPERFAMILY SSF51338 8 64 6.86E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS06070 4341d1d1a392ca46b6078afbc9aa2b55 439 SUPERFAMILY SSF51338 362 436 6.86E-22 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS06070 4341d1d1a392ca46b6078afbc9aa2b55 439 PANTHER PTHR11271:SF7 1 438 1.9E-168 T 22-04-2016 R615_RS06070 4341d1d1a392ca46b6078afbc9aa2b55 439 Pfam PF01979 Amidohydrolase family 62 410 9.4E-66 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 R615_RS06070 4341d1d1a392ca46b6078afbc9aa2b55 439 Gene3D G3DSA:2.30.40.10 7 66 3.6E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS06070 4341d1d1a392ca46b6078afbc9aa2b55 439 Gene3D G3DSA:2.30.40.10 371 411 3.6E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS01660 51b626d02493610c5b9f3058e2b24a00 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 1.1E-154 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 R615_RS01660 51b626d02493610c5b9f3058e2b24a00 444 PANTHER PTHR35566:SF1 1 444 1.0E-165 T 22-04-2016 R615_RS01660 51b626d02493610c5b9f3058e2b24a00 444 PANTHER PTHR35566 1 444 1.0E-165 T 22-04-2016 R615_RS01660 51b626d02493610c5b9f3058e2b24a00 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 3.3E-155 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 R615_RS11910 4134f8cf52829ce0f23fa564a093691b 170 SMART SM00267 1 169 4.3E-55 T 22-04-2016 IPR000160 GGDEF domain R615_RS11910 4134f8cf52829ce0f23fa564a093691b 170 Gene3D G3DSA:3.30.70.270 7 168 1.9E-51 T 22-04-2016 R615_RS11910 4134f8cf52829ce0f23fa564a093691b 170 SUPERFAMILY SSF55073 10 167 9.68E-47 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS11910 4134f8cf52829ce0f23fa564a093691b 170 Pfam PF00990 Diguanylate cyclase, GGDEF domain 6 165 1.0E-49 T 22-04-2016 IPR000160 GGDEF domain R615_RS11910 4134f8cf52829ce0f23fa564a093691b 170 PANTHER PTHR10799:SF750 13 166 2.3E-35 T 22-04-2016 R615_RS11910 4134f8cf52829ce0f23fa564a093691b 170 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 2 168 1.0E-52 T 22-04-2016 IPR000160 GGDEF domain R615_RS11910 4134f8cf52829ce0f23fa564a093691b 170 PANTHER PTHR10799 13 166 2.3E-35 T 22-04-2016 R615_RS03185 b5db1eb961b11cb165cd9b9fcd455900 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 6.0E-13 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03185 b5db1eb961b11cb165cd9b9fcd455900 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.5E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03185 b5db1eb961b11cb165cd9b9fcd455900 86 Pfam PF01016 Ribosomal L27 protein 2 82 5.1E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03185 b5db1eb961b11cb165cd9b9fcd455900 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03185 b5db1eb961b11cb165cd9b9fcd455900 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.139 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03185 b5db1eb961b11cb165cd9b9fcd455900 86 PANTHER PTHR15893 1 86 9.4E-49 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03185 b5db1eb961b11cb165cd9b9fcd455900 86 Gene3D G3DSA:2.40.50.100 20 84 8.8E-30 T 22-04-2016 R615_RS03185 b5db1eb961b11cb165cd9b9fcd455900 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.4E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03185 b5db1eb961b11cb165cd9b9fcd455900 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.4E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03185 b5db1eb961b11cb165cd9b9fcd455900 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.4E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03185 b5db1eb961b11cb165cd9b9fcd455900 86 SUPERFAMILY SSF110324 2 82 1.36E-32 T 22-04-2016 R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 Gene3D G3DSA:1.10.287.130 217 276 4.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 SMART SM00304 171 226 1.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 290 4.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 Pfam PF00672 HAMP domain 152 223 6.0E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 Gene3D G3DSA:3.30.565.10 277 452 3.3E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 SUPERFAMILY SSF55874 280 449 1.28E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 PANTHER PTHR24423 165 448 1.6E-56 T 22-04-2016 R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 PANTHER PTHR24423:SF564 165 448 1.6E-56 T 22-04-2016 R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 SMART SM00388 227 291 3.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 SMART SM00387 335 450 3.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 9.0E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 9.0E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 SUPERFAMILY SSF47384 210 291 1.73E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 SUPERFAMILY SSF158472 172 225 2.88E-9 T 22-04-2016 R615_RS15425 c5215f33a27e657ccf4610cd5362702d 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 447 2.9E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS09950 1d39e481c40775e8a667c1ee5a198f40 741 Pfam PF00593 TonB dependent receptor 500 740 3.7E-21 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS09950 1d39e481c40775e8a667c1ee5a198f40 741 Pfam PF07715 TonB-dependent Receptor Plug Domain 86 186 1.3E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS09950 1d39e481c40775e8a667c1ee5a198f40 741 Gene3D G3DSA:2.170.130.10 69 195 3.4E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS09950 1d39e481c40775e8a667c1ee5a198f40 741 PANTHER PTHR32552 78 741 4.4E-182 T 22-04-2016 R615_RS09950 1d39e481c40775e8a667c1ee5a198f40 741 PANTHER PTHR32552 17 51 4.4E-182 T 22-04-2016 R615_RS09950 1d39e481c40775e8a667c1ee5a198f40 741 PANTHER PTHR32552:SF37 78 741 4.4E-182 T 22-04-2016 R615_RS09950 1d39e481c40775e8a667c1ee5a198f40 741 PANTHER PTHR32552:SF37 17 51 4.4E-182 T 22-04-2016 R615_RS09950 1d39e481c40775e8a667c1ee5a198f40 741 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 724 741 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site R615_RS09950 1d39e481c40775e8a667c1ee5a198f40 741 Gene3D G3DSA:2.40.170.20 204 741 2.3E-106 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS09950 1d39e481c40775e8a667c1ee5a198f40 741 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 88 741 1.7E-92 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 R615_RS09950 1d39e481c40775e8a667c1ee5a198f40 741 SUPERFAMILY SSF56935 41 51 2.93E-103 T 22-04-2016 R615_RS09950 1d39e481c40775e8a667c1ee5a198f40 741 SUPERFAMILY SSF56935 78 741 2.93E-103 T 22-04-2016 R615_RS08285 d21bd48334e03e84c03fb867a3a19cd5 196 SUPERFAMILY SSF89360 4 101 4.9E-19 T 22-04-2016 IPR000361 FeS cluster biogenesis R615_RS08285 d21bd48334e03e84c03fb867a3a19cd5 196 PANTHER PTHR10072 5 101 3.3E-63 T 22-04-2016 R615_RS08285 d21bd48334e03e84c03fb867a3a19cd5 196 PANTHER PTHR10072 151 192 3.3E-63 T 22-04-2016 R615_RS08285 d21bd48334e03e84c03fb867a3a19cd5 196 Gene3D G3DSA:2.60.300.12 5 101 6.9E-15 T 22-04-2016 IPR000361 FeS cluster biogenesis R615_RS08285 d21bd48334e03e84c03fb867a3a19cd5 196 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 101 8.8E-7 T 22-04-2016 IPR000361 FeS cluster biogenesis R615_RS08285 d21bd48334e03e84c03fb867a3a19cd5 196 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 5 195 6.7E-88 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 R615_RS08285 d21bd48334e03e84c03fb867a3a19cd5 196 PANTHER PTHR10072:SF37 5 101 3.3E-63 T 22-04-2016 R615_RS08285 d21bd48334e03e84c03fb867a3a19cd5 196 PANTHER PTHR10072:SF37 151 192 3.3E-63 T 22-04-2016 R615_RS08285 d21bd48334e03e84c03fb867a3a19cd5 196 Pfam PF01106 NifU-like domain 115 181 3.4E-21 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 R615_RS08285 d21bd48334e03e84c03fb867a3a19cd5 196 SUPERFAMILY SSF117916 99 188 9.16E-25 T 22-04-2016 R615_RS08285 d21bd48334e03e84c03fb867a3a19cd5 196 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 4 195 39.214 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 R615_RS08285 d21bd48334e03e84c03fb867a3a19cd5 196 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 184 7.0E-21 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 R615_RS08415 288387cd66ce86ce8a1316d4e4a4211c 211 Gene3D G3DSA:1.10.3890.10 1 207 2.3E-73 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 R615_RS08415 288387cd66ce86ce8a1316d4e4a4211c 211 Pfam PF04356 Protein of unknown function (DUF489) 7 198 4.2E-69 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 R615_RS08415 288387cd66ce86ce8a1316d4e4a4211c 211 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 206 33.699 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 R615_RS08415 288387cd66ce86ce8a1316d4e4a4211c 211 PANTHER PTHR38100 2 208 4.8E-69 T 22-04-2016 R615_RS08415 288387cd66ce86ce8a1316d4e4a4211c 211 PANTHER PTHR38100:SF1 2 208 4.8E-69 T 22-04-2016 R615_RS08415 288387cd66ce86ce8a1316d4e4a4211c 211 SUPERFAMILY SSF101322 1 207 7.06E-65 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 R615_RS08415 288387cd66ce86ce8a1316d4e4a4211c 211 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 20 196 1.0E-29 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 R615_RS02020 0635f289accec5d30ecbc499e096fb98 265 Pfam PF04085 rod shape-determining protein MreC 102 245 8.7E-35 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 R615_RS02020 0635f289accec5d30ecbc499e096fb98 265 PANTHER PTHR34138:SF1 1 257 1.8E-63 T 22-04-2016 R615_RS02020 0635f289accec5d30ecbc499e096fb98 265 PANTHER PTHR34138 1 257 1.8E-63 T 22-04-2016 R615_RS02020 0635f289accec5d30ecbc499e096fb98 265 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 53 249 7.4E-51 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 R615_RS02020 0635f289accec5d30ecbc499e096fb98 265 PIRSF PIRSF038471 1 259 2.5E-68 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 3.9E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 3.9E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 3.9E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 Pfam PF00106 short chain dehydrogenase 5 188 1.1E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 PANTHER PTHR24322 8 132 2.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 PANTHER PTHR24322 148 180 2.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 Gene3D G3DSA:3.40.50.720 4 214 3.1E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 SUPERFAMILY SSF51735 3 243 1.94E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 PANTHER PTHR24322:SF376 8 132 2.3E-39 T 22-04-2016 R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 PANTHER PTHR24322:SF376 148 180 2.3E-39 T 22-04-2016 R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS03550 32ef0d4424d1aeb8d694af1c2f5b0392 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.0E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS05585 c960485a8da699bebe97f11836078b62 406 PANTHER PTHR11587:SF2 1 403 8.0E-231 T 22-04-2016 R615_RS05585 c960485a8da699bebe97f11836078b62 406 Pfam PF00764 Arginosuccinate synthase 8 396 2.9E-156 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS05585 c960485a8da699bebe97f11836078b62 406 Gene3D G3DSA:3.40.50.620 5 172 2.7E-66 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS05585 c960485a8da699bebe97f11836078b62 406 SUPERFAMILY SSF69864 175 400 1.57E-95 T 22-04-2016 R615_RS05585 c960485a8da699bebe97f11836078b62 406 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS05585 c960485a8da699bebe97f11836078b62 406 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 402 52.732 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS05585 c960485a8da699bebe97f11836078b62 406 PANTHER PTHR11587 1 403 8.0E-231 T 22-04-2016 R615_RS05585 c960485a8da699bebe97f11836078b62 406 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 118 129 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS05585 c960485a8da699bebe97f11836078b62 406 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 399 1.8E-142 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS05585 c960485a8da699bebe97f11836078b62 406 Gene3D G3DSA:3.90.1260.10 178 400 4.3E-102 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS05585 c960485a8da699bebe97f11836078b62 406 SUPERFAMILY SSF52402 5 208 4.41E-50 T 22-04-2016 R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 Pfam PF00672 HAMP domain 286 346 5.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 SMART SM00267 350 519 1.0E-20 T 22-04-2016 IPR000160 GGDEF domain R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 504 7.1E-26 T 22-04-2016 IPR000160 GGDEF domain R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 SUPERFAMILY SSF55073 366 510 8.63E-24 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 500 7.5E-18 T 22-04-2016 IPR000160 GGDEF domain R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 Gene3D G3DSA:3.30.70.270 362 511 1.7E-28 T 22-04-2016 R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 SUPERFAMILY SSF103190 57 180 5.49E-5 T 22-04-2016 IPR029151 Periplasmic sensor domain-like R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 PANTHER PTHR33121 421 790 8.6E-71 T 22-04-2016 R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 PANTHER PTHR33121:SF13 421 790 8.6E-71 T 22-04-2016 R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 SUPERFAMILY SSF141868 543 783 5.1E-79 T 22-04-2016 IPR001633 EAL domain R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 Gene3D G3DSA:3.20.20.450 534 782 2.4E-81 T 22-04-2016 IPR001633 EAL domain R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 SMART SM00052 528 775 2.9E-92 T 22-04-2016 IPR001633 EAL domain R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 Pfam PF00563 EAL domain 534 770 3.1E-66 T 22-04-2016 IPR001633 EAL domain R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 SUPERFAMILY SSF158472 304 352 3.01E-5 T 22-04-2016 R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 SMART SM00304 302 355 0.0012 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS11700 151b9ca3ec6c79e97823eee7b073ad56 790 Pfam PF14827 Double sensory domain of two-component sensor kinase 42 229 4.1E-12 T 22-04-2016 IPR029150 Double Cache domain 3 R615_RS12500 68a99d37584b08c2f920404388cf8a39 245 PANTHER PTHR30456 6 245 5.1E-134 T 22-04-2016 R615_RS12500 68a99d37584b08c2f920404388cf8a39 245 PANTHER PTHR30456:SF0 6 245 5.1E-134 T 22-04-2016 R615_RS12500 68a99d37584b08c2f920404388cf8a39 245 SUPERFAMILY SSF63892 7 243 1.57E-97 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 R615_RS12500 68a99d37584b08c2f920404388cf8a39 245 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 245 125.585 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 R615_RS12500 68a99d37584b08c2f920404388cf8a39 245 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 9 240 1.6E-100 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 R615_RS12500 68a99d37584b08c2f920404388cf8a39 245 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 9 242 1.6E-97 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 R615_RS12500 68a99d37584b08c2f920404388cf8a39 245 Gene3D G3DSA:3.20.20.70 6 244 3.1E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS16885 f191fc6839da5c0aaead430c04da11b7 292 PANTHER PTHR33490:SF6 1 292 9.5E-73 T 22-04-2016 R615_RS16885 f191fc6839da5c0aaead430c04da11b7 292 Pfam PF01841 Transglutaminase-like superfamily 134 245 6.2E-22 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS16885 f191fc6839da5c0aaead430c04da11b7 292 PANTHER PTHR33490 1 292 9.5E-73 T 22-04-2016 R615_RS16885 f191fc6839da5c0aaead430c04da11b7 292 SMART SM00460 177 247 2.5E-20 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS16885 f191fc6839da5c0aaead430c04da11b7 292 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 82 1.7E-23 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal R615_RS16885 f191fc6839da5c0aaead430c04da11b7 292 Gene3D G3DSA:3.90.260.10 153 250 2.4E-11 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS16885 f191fc6839da5c0aaead430c04da11b7 292 SUPERFAMILY SSF54001 129 272 1.77E-40 T 22-04-2016 R615_RS16410 d878361be95e4a6291c2132d4e6432aa 387 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 350 3.8E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 R615_RS16410 d878361be95e4a6291c2132d4e6432aa 387 PANTHER PTHR30482:SF4 127 387 9.5E-174 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC R615_RS16410 d878361be95e4a6291c2132d4e6432aa 387 PANTHER PTHR30482:SF4 2 99 9.5E-174 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC R615_RS16410 d878361be95e4a6291c2132d4e6432aa 387 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 48 362 3.9E-138 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC R615_RS16410 d878361be95e4a6291c2132d4e6432aa 387 PANTHER PTHR30482 127 387 9.5E-174 T 22-04-2016 R615_RS16410 d878361be95e4a6291c2132d4e6432aa 387 PANTHER PTHR30482 2 99 9.5E-174 T 22-04-2016 R615_RS06735 dfa2a677186c7953d67ff3f24dd74aff 433 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 78 188 4.3E-20 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS06735 dfa2a677186c7953d67ff3f24dd74aff 433 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 401 420 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 R615_RS06735 dfa2a677186c7953d67ff3f24dd74aff 433 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 196 285 2.4E-10 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 R615_RS06735 dfa2a677186c7953d67ff3f24dd74aff 433 PANTHER PTHR10909:SF243 7 424 1.3E-152 T 22-04-2016 R615_RS06735 dfa2a677186c7953d67ff3f24dd74aff 433 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 304 425 1.5E-27 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS06735 dfa2a677186c7953d67ff3f24dd74aff 433 Gene3D G3DSA:2.40.110.10 196 285 1.0E-17 T 22-04-2016 R615_RS06735 dfa2a677186c7953d67ff3f24dd74aff 433 SUPERFAMILY SSF56645 73 295 2.62E-42 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 R615_RS06735 dfa2a677186c7953d67ff3f24dd74aff 433 Gene3D G3DSA:1.10.540.10 74 188 3.0E-26 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS06735 dfa2a677186c7953d67ff3f24dd74aff 433 SUPERFAMILY SSF47203 301 425 2.58E-36 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS06735 dfa2a677186c7953d67ff3f24dd74aff 433 Gene3D G3DSA:1.20.140.10 286 425 1.2E-37 T 22-04-2016 R615_RS06735 dfa2a677186c7953d67ff3f24dd74aff 433 PANTHER PTHR10909 7 424 1.3E-152 T 22-04-2016 R615_RS04860 8458ae8b5dd3c479c4cfa923288bb97b 472 PANTHER PTHR11203:SF11 128 457 2.1E-110 T 22-04-2016 R615_RS04860 8458ae8b5dd3c479c4cfa923288bb97b 472 PANTHER PTHR11203:SF11 3 112 2.1E-110 T 22-04-2016 R615_RS04860 8458ae8b5dd3c479c4cfa923288bb97b 472 PANTHER PTHR11203 128 457 2.1E-110 T 22-04-2016 R615_RS04860 8458ae8b5dd3c479c4cfa923288bb97b 472 PANTHER PTHR11203 3 112 2.1E-110 T 22-04-2016 R615_RS04860 8458ae8b5dd3c479c4cfa923288bb97b 472 SMART SM00849 14 229 1.8E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS04860 8458ae8b5dd3c479c4cfa923288bb97b 472 SMART SM01027 249 389 1.7E-51 T 22-04-2016 IPR022712 Beta-Casp domain R615_RS04860 8458ae8b5dd3c479c4cfa923288bb97b 472 SUPERFAMILY SSF56281 3 459 6.77E-113 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS04860 8458ae8b5dd3c479c4cfa923288bb97b 472 Pfam PF10996 Beta-Casp domain 249 389 1.5E-25 T 22-04-2016 IPR022712 Beta-Casp domain R615_RS04860 8458ae8b5dd3c479c4cfa923288bb97b 472 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 406 458 8.0E-11 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain R615_RS04860 8458ae8b5dd3c479c4cfa923288bb97b 472 Pfam PF00753 Metallo-beta-lactamase superfamily 23 203 3.3E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS04860 8458ae8b5dd3c479c4cfa923288bb97b 472 Gene3D G3DSA:3.60.15.10 3 258 4.5E-41 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS07495 b35b3a9b9c2ad43b393ed384c03bfd33 352 SUPERFAMILY SSF88713 43 231 2.63E-37 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 R615_RS07495 b35b3a9b9c2ad43b393ed384c03bfd33 352 PANTHER PTHR34216:SF1 20 345 1.6E-59 T 22-04-2016 R615_RS07495 b35b3a9b9c2ad43b393ed384c03bfd33 352 Gene3D G3DSA:3.20.20.370 66 211 6.9E-30 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 R615_RS07495 b35b3a9b9c2ad43b393ed384c03bfd33 352 Pfam PF01522 Polysaccharide deacetylase 80 205 1.5E-28 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 R615_RS07495 b35b3a9b9c2ad43b393ed384c03bfd33 352 PANTHER PTHR34216 20 345 1.6E-59 T 22-04-2016 R615_RS14115 c670cc082ab6814bbc5a1c0699b1d555 426 SUPERFAMILY SSF109998 26 201 5.49E-41 T 22-04-2016 IPR027304 Trigger factor/SurA domain R615_RS14115 c670cc082ab6814bbc5a1c0699b1d555 426 Pfam PF13616 PPIC-type PPIASE domain 276 380 7.5E-33 T 22-04-2016 R615_RS14115 c670cc082ab6814bbc5a1c0699b1d555 426 Hamap MF_01183 Chaperone SurA [surA]. 7 425 32.711 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 R615_RS14115 c670cc082ab6814bbc5a1c0699b1d555 426 Pfam PF00639 PPIC-type PPIASE domain 177 270 1.3E-20 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 R615_RS14115 c670cc082ab6814bbc5a1c0699b1d555 426 PANTHER PTHR10657 11 423 2.0E-140 T 22-04-2016 R615_RS14115 c670cc082ab6814bbc5a1c0699b1d555 426 Gene3D G3DSA:3.10.50.40 283 402 1.0E-37 T 22-04-2016 R615_RS14115 c670cc082ab6814bbc5a1c0699b1d555 426 Gene3D G3DSA:3.10.50.40 168 282 1.3E-33 T 22-04-2016 R615_RS14115 c670cc082ab6814bbc5a1c0699b1d555 426 Pfam PF09312 SurA N-terminal domain 26 141 1.3E-38 T 22-04-2016 IPR015391 SurA N-terminal R615_RS14115 c670cc082ab6814bbc5a1c0699b1d555 426 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 318 339 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site R615_RS14115 c670cc082ab6814bbc5a1c0699b1d555 426 SUPERFAMILY SSF54534 281 381 1.5E-31 T 22-04-2016 R615_RS14115 c670cc082ab6814bbc5a1c0699b1d555 426 SUPERFAMILY SSF54534 171 275 1.05E-28 T 22-04-2016 R615_RS14115 c670cc082ab6814bbc5a1c0699b1d555 426 PANTHER PTHR10657:SF16 11 423 2.0E-140 T 22-04-2016 R615_RS04560 9343a833516e716559c534248135880a 101 Pfam PF14090 Helix-turn-helix domain 7 64 1.8E-7 T 22-04-2016 R615_RS08910 c912403ab590063ea738068c52d31635 299 SUPERFAMILY SSF161111 121 295 1.96E-31 T 22-04-2016 R615_RS08910 c912403ab590063ea738068c52d31635 299 SUPERFAMILY SSF55008 34 96 3.93E-7 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 R615_RS08910 c912403ab590063ea738068c52d31635 299 Pfam PF01545 Cation efflux family 128 295 3.9E-13 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS08910 c912403ab590063ea738068c52d31635 299 Gene3D G3DSA:1.20.1510.10 124 296 2.4E-21 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain R615_RS08910 c912403ab590063ea738068c52d31635 299 PANTHER PTHR11562 115 295 5.6E-12 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS06685 66649261c903002d569fae394a3b80f5 384 SUPERFAMILY SSF111369 47 236 1.96E-16 T 22-04-2016 R615_RS06685 66649261c903002d569fae394a3b80f5 384 Pfam PF00529 HlyD membrane-fusion protein of T1SS 27 272 3.7E-6 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 R615_RS06685 66649261c903002d569fae394a3b80f5 384 Gene3D G3DSA:2.40.50.100 177 204 4.4E-10 T 22-04-2016 R615_RS06685 66649261c903002d569fae394a3b80f5 384 Gene3D G3DSA:2.40.50.100 63 88 4.4E-10 T 22-04-2016 R615_RS06685 66649261c903002d569fae394a3b80f5 384 PANTHER PTHR32347 4 374 8.7E-47 T 22-04-2016 R615_RS06685 66649261c903002d569fae394a3b80f5 384 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 372 1.0E-44 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 R615_RS06685 66649261c903002d569fae394a3b80f5 384 PANTHER PTHR32347:SF16 4 374 8.7E-47 T 22-04-2016 R615_RS06685 66649261c903002d569fae394a3b80f5 384 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 279 2.2E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain R615_RS00735 07c3588b28db7804e45c7c5128893e02 310 Pfam PF13609 Gram-negative porin 6 294 1.8E-37 T 22-04-2016 R615_RS00735 07c3588b28db7804e45c7c5128893e02 310 SUPERFAMILY SSF56935 27 310 2.62E-50 T 22-04-2016 R615_RS00735 07c3588b28db7804e45c7c5128893e02 310 Gene3D G3DSA:2.40.160.10 26 310 5.1E-49 T 22-04-2016 IPR023614 Porin domain R615_RS00735 07c3588b28db7804e45c7c5128893e02 310 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 269 286 1.37E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 R615_RS00735 07c3588b28db7804e45c7c5128893e02 310 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 1.37E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 R615_RS00735 07c3588b28db7804e45c7c5128893e02 310 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 1.37E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 R615_RS00735 07c3588b28db7804e45c7c5128893e02 310 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 1.37E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 424 1.4E-136 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 428 3.0E-31 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 SMART SM00984 320 428 4.9E-51 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 PIRSF PIRSF500134 1 445 2.0E-185 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 PIRSF PIRSF000124 1 443 4.7E-144 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 PANTHER PTHR11374 1 448 1.3E-233 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 SUPERFAMILY SSF52413 306 438 6.15E-38 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 Gene3D G3DSA:3.40.50.720 235 443 2.1E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 SUPERFAMILY SSF51735 2 195 1.23E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 SUPERFAMILY SSF48179 204 301 2.31E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 Gene3D G3DSA:1.20.5.100 207 233 8.9E-17 T 22-04-2016 R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 Gene3D G3DSA:3.40.50.720 2 206 2.2E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2 186 3.5E-64 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 PANTHER PTHR11374:SF18 1 448 1.3E-233 T 22-04-2016 R615_RS08605 52a50c5fc9e07beeb2fec8436282ceba 448 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 296 3.5E-35 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 R615_RS13390 140a6c7865a5277c772b04d836b0d1fa 304 PANTHER PTHR21621 1 297 1.8E-125 T 22-04-2016 R615_RS13390 140a6c7865a5277c772b04d836b0d1fa 304 Gene3D G3DSA:3.30.470.20 172 276 5.0E-37 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS13390 140a6c7865a5277c772b04d836b0d1fa 304 SUPERFAMILY SSF56059 98 287 5.89E-50 T 22-04-2016 R615_RS13390 140a6c7865a5277c772b04d836b0d1fa 304 Pfam PF08443 RimK-like ATP-grasp domain 98 284 5.7E-69 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type R615_RS13390 140a6c7865a5277c772b04d836b0d1fa 304 Gene3D G3DSA:3.30.1490.20 103 171 3.1E-7 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS13390 140a6c7865a5277c772b04d836b0d1fa 304 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.144 T 22-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK R615_RS13390 140a6c7865a5277c772b04d836b0d1fa 304 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 284 9.9E-84 T 22-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 R615_RS13390 140a6c7865a5277c772b04d836b0d1fa 304 Gene3D G3DSA:3.40.50.20 8 102 2.2E-15 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS13390 140a6c7865a5277c772b04d836b0d1fa 304 PANTHER PTHR21621:SF0 1 297 1.8E-125 T 22-04-2016 R615_RS12410 3b895127cbf1b6467acceb6b5a05f56d 279 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 R615_RS12410 3b895127cbf1b6467acceb6b5a05f56d 279 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 109 3.3E-5 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS12410 3b895127cbf1b6467acceb6b5a05f56d 279 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 153 1.0E-5 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS12410 3b895127cbf1b6467acceb6b5a05f56d 279 PANTHER PTHR23416 3 238 4.1E-100 T 22-04-2016 R615_RS12410 3b895127cbf1b6467acceb6b5a05f56d 279 SUPERFAMILY SSF51161 4 171 9.84E-57 T 22-04-2016 IPR011004 Trimeric LpxA-like R615_RS12410 3b895127cbf1b6467acceb6b5a05f56d 279 PANTHER PTHR23416:SF55 3 238 4.1E-100 T 22-04-2016 R615_RS12410 3b895127cbf1b6467acceb6b5a05f56d 279 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 167 1.1E-77 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 R615_RS12410 3b895127cbf1b6467acceb6b5a05f56d 279 Gene3D G3DSA:2.160.10.10 60 220 2.4E-38 T 22-04-2016 R615_RS12410 3b895127cbf1b6467acceb6b5a05f56d 279 Gene3D G3DSA:1.10.3130.10 4 59 5.9E-27 T 22-04-2016 R615_RS03205 f6c194f33abef7bc453615da2e94dfd8 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.991 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03205 f6c194f33abef7bc453615da2e94dfd8 88 PANTHER PTHR33398 2 83 9.1E-27 T 22-04-2016 R615_RS03205 f6c194f33abef7bc453615da2e94dfd8 88 Gene3D G3DSA:1.20.58.110 2 86 6.1E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03205 f6c194f33abef7bc453615da2e94dfd8 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 83 2.6E-25 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03205 f6c194f33abef7bc453615da2e94dfd8 88 Pfam PF01649 Ribosomal protein S20 2 83 3.8E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03205 f6c194f33abef7bc453615da2e94dfd8 88 SUPERFAMILY SSF46992 3 86 8.5E-28 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03205 f6c194f33abef7bc453615da2e94dfd8 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 21 87 7.0E-15 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS13385 f2806bc56d35e1b85f44a94851730f8e 1162 Pfam PF02811 PHP domain 7 171 7.8E-40 T 22-04-2016 IPR004013 PHP domain GO:0003824 R615_RS13385 f2806bc56d35e1b85f44a94851730f8e 1162 Pfam PF14579 Helix-hairpin-helix motif 809 894 1.6E-25 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS13385 f2806bc56d35e1b85f44a94851730f8e 1162 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1034 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS13385 f2806bc56d35e1b85f44a94851730f8e 1162 Gene3D G3DSA:3.20.20.140 5 262 2.8E-19 T 22-04-2016 R615_RS13385 f2806bc56d35e1b85f44a94851730f8e 1162 Gene3D G3DSA:1.10.150.280 826 881 8.9E-8 T 22-04-2016 R615_RS13385 f2806bc56d35e1b85f44a94851730f8e 1162 SUPERFAMILY SSF89550 5 262 2.94E-15 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 R615_RS13385 f2806bc56d35e1b85f44a94851730f8e 1162 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 734 1.4E-169 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS13385 f2806bc56d35e1b85f44a94851730f8e 1162 PANTHER PTHR32294 1 1162 0.0 T 22-04-2016 R615_RS13385 f2806bc56d35e1b85f44a94851730f8e 1162 PANTHER PTHR32294:SF0 1 1162 0.0 T 22-04-2016 R615_RS13385 f2806bc56d35e1b85f44a94851730f8e 1162 SUPERFAMILY SSF160975 826 883 4.97E-5 T 22-04-2016 R615_RS13385 f2806bc56d35e1b85f44a94851730f8e 1162 SMART SM00481 6 73 5.0E-19 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 Pfam PF08448 PAS fold 289 395 1.2E-6 T 22-04-2016 IPR013656 PAS fold-4 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 602 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 658 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 637 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 616 6.0E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 SMART SM00388 408 498 1.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 543 659 2.1E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 SUPERFAMILY SSF55874 488 659 5.89E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 Gene3D G3DSA:3.30.565.10 484 659 2.1E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 Gene3D G3DSA:3.30.450.20 275 393 1.1E-8 T 22-04-2016 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 Pfam PF00512 His Kinase A (phospho-acceptor) domain 410 497 1.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 PANTHER PTHR24423 461 658 1.2E-78 T 22-04-2016 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 PANTHER PTHR24423 1 23 1.2E-78 T 22-04-2016 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 PANTHER PTHR24423 267 436 1.2E-78 T 22-04-2016 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 SMART SM00387 540 661 5.2E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 SMART SM00091 283 349 1.9E-4 T 22-04-2016 IPR000014 PAS domain R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 Gene3D G3DSA:1.10.287.130 408 483 3.4E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 SUPERFAMILY SSF55785 269 339 7.96E-9 T 22-04-2016 IPR000014 PAS domain R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 SUPERFAMILY SSF47384 403 496 4.51E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 PANTHER PTHR24423:SF450 461 658 1.2E-78 T 22-04-2016 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 PANTHER PTHR24423:SF450 1 23 1.2E-78 T 22-04-2016 R615_RS03470 9cbc12700ea1c9bede53e977a341326c 668 PANTHER PTHR24423:SF450 267 436 1.2E-78 T 22-04-2016 R615_RS09615 053c904613bc379ca89b4764d92e1bce 184 PANTHER PTHR38687 85 184 5.2E-13 T 22-04-2016 R615_RS09615 053c904613bc379ca89b4764d92e1bce 184 Pfam PF05036 Sporulation related domain 107 169 1.0E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 R615_RS09615 053c904613bc379ca89b4764d92e1bce 184 SUPERFAMILY SSF110997 106 176 6.8E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 R615_RS09615 053c904613bc379ca89b4764d92e1bce 184 PANTHER PTHR38687:SF1 85 184 5.2E-13 T 22-04-2016 R615_RS09615 053c904613bc379ca89b4764d92e1bce 184 Gene3D G3DSA:3.30.70.1070 105 173 8.7E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 R615_RS02440 496350e4d79957ff1d509d7725302433 306 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 1 286 2.4E-100 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 R615_RS02440 496350e4d79957ff1d509d7725302433 306 PANTHER PTHR11088 1 287 3.6E-101 T 22-04-2016 R615_RS02440 496350e4d79957ff1d509d7725302433 306 Pfam PF01715 IPP transferase 31 277 2.6E-80 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 R615_RS02440 496350e4d79957ff1d509d7725302433 306 SUPERFAMILY SSF52540 1 141 7.07E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02440 496350e4d79957ff1d509d7725302433 306 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 1 294 25.927 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 R615_RS02440 496350e4d79957ff1d509d7725302433 306 Gene3D G3DSA:1.10.287.890 193 275 2.3E-33 T 22-04-2016 R615_RS02440 496350e4d79957ff1d509d7725302433 306 Gene3D G3DSA:3.40.50.300 1 164 1.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11590 380155e97b3836ad636943e09eb729de 292 SUPERFAMILY SSF54637 184 289 4.71E-21 T 22-04-2016 IPR029069 HotDog domain R615_RS11590 380155e97b3836ad636943e09eb729de 292 Gene3D G3DSA:3.10.129.10 71 168 3.8E-5 T 22-04-2016 IPR029069 HotDog domain R615_RS11590 380155e97b3836ad636943e09eb729de 292 Pfam PF01575 MaoC like domain 193 268 8.3E-16 T 22-04-2016 IPR002539 MaoC-like domain R615_RS11590 380155e97b3836ad636943e09eb729de 292 PRINTS PR01483 Fatty acid synthase signature 189 211 1.8E-5 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 R615_RS11590 380155e97b3836ad636943e09eb729de 292 PRINTS PR01483 Fatty acid synthase signature 211 232 1.8E-5 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 R615_RS11590 380155e97b3836ad636943e09eb729de 292 PANTHER PTHR13078 41 285 9.1E-43 T 22-04-2016 R615_RS11590 380155e97b3836ad636943e09eb729de 292 SUPERFAMILY SSF54637 48 160 9.82E-7 T 22-04-2016 IPR029069 HotDog domain R615_RS11590 380155e97b3836ad636943e09eb729de 292 PANTHER PTHR13078:SF54 41 285 9.1E-43 T 22-04-2016 R615_RS11590 380155e97b3836ad636943e09eb729de 292 Gene3D G3DSA:3.10.129.10 184 289 2.0E-23 T 22-04-2016 IPR029069 HotDog domain R615_RS10045 3c88f579dc5c43815673b5d967f6cd77 138 PANTHER PTHR13355:SF5 28 133 6.2E-15 T 22-04-2016 R615_RS10045 3c88f579dc5c43815673b5d967f6cd77 138 Gene3D G3DSA:3.40.630.30 10 123 1.3E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS10045 3c88f579dc5c43815673b5d967f6cd77 138 Pfam PF13673 Acetyltransferase (GNAT) domain 34 122 4.6E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS10045 3c88f579dc5c43815673b5d967f6cd77 138 SUPERFAMILY SSF55729 14 124 1.69E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS10045 3c88f579dc5c43815673b5d967f6cd77 138 PANTHER PTHR13355 28 133 6.2E-15 T 22-04-2016 R615_RS15055 070a1ef68798bd64df676c87184f3230 623 PANTHER PTHR10799:SF686 280 430 4.0E-26 T 22-04-2016 R615_RS15055 070a1ef68798bd64df676c87184f3230 623 PANTHER PTHR10799:SF686 495 618 4.0E-26 T 22-04-2016 R615_RS15055 070a1ef68798bd64df676c87184f3230 623 SMART SM00267 455 623 2.6E-49 T 22-04-2016 IPR000160 GGDEF domain R615_RS15055 070a1ef68798bd64df676c87184f3230 623 PANTHER PTHR10799 280 430 4.0E-26 T 22-04-2016 R615_RS15055 070a1ef68798bd64df676c87184f3230 623 PANTHER PTHR10799 495 618 4.0E-26 T 22-04-2016 R615_RS15055 070a1ef68798bd64df676c87184f3230 623 Gene3D G3DSA:3.30.70.270 468 622 3.3E-45 T 22-04-2016 R615_RS15055 070a1ef68798bd64df676c87184f3230 623 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 622 6.2E-40 T 22-04-2016 IPR000160 GGDEF domain R615_RS15055 070a1ef68798bd64df676c87184f3230 623 Pfam PF07695 7TM diverse intracellular signalling 216 396 4.0E-16 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 R615_RS15055 070a1ef68798bd64df676c87184f3230 623 SUPERFAMILY SSF55073 471 622 2.12E-42 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS15055 070a1ef68798bd64df676c87184f3230 623 Pfam PF00990 Diguanylate cyclase, GGDEF domain 466 618 2.5E-39 T 22-04-2016 IPR000160 GGDEF domain R615_RS12600 388e318dce6400cabec48fe850d56de6 432 Gene3D G3DSA:1.25.40.10 144 252 9.0E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS12600 388e318dce6400cabec48fe850d56de6 432 Gene3D G3DSA:1.25.40.10 305 403 9.9E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS12600 388e318dce6400cabec48fe850d56de6 432 SUPERFAMILY SSF48452 75 263 2.49E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS12600 388e318dce6400cabec48fe850d56de6 432 SMART SM00028 374 407 150.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12600 388e318dce6400cabec48fe850d56de6 432 SMART SM00028 163 196 0.8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12600 388e318dce6400cabec48fe850d56de6 432 SMART SM00028 234 267 300.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12600 388e318dce6400cabec48fe850d56de6 432 SMART SM00028 338 371 16.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12600 388e318dce6400cabec48fe850d56de6 432 SMART SM00028 90 123 1.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12600 388e318dce6400cabec48fe850d56de6 432 SUPERFAMILY SSF48452 305 410 2.81E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS12600 388e318dce6400cabec48fe850d56de6 432 Pfam PF13432 Tetratricopeptide repeat 57 117 4.6E-5 T 22-04-2016 R615_RS12600 388e318dce6400cabec48fe850d56de6 432 PANTHER PTHR23083 304 425 4.9E-13 T 22-04-2016 R615_RS12600 388e318dce6400cabec48fe850d56de6 432 PANTHER PTHR23083 60 264 4.9E-13 T 22-04-2016 R615_RS12600 388e318dce6400cabec48fe850d56de6 432 Gene3D G3DSA:1.25.40.10 59 143 5.5E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS11660 c9cc288ed108fffeeb21e16c9efa20c4 210 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 9 202 2.6E-48 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 R615_RS11660 c9cc288ed108fffeeb21e16c9efa20c4 210 Pfam PF01914 MarC family integral membrane protein 8 204 2.3E-50 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 R615_RS11660 c9cc288ed108fffeeb21e16c9efa20c4 210 PANTHER PTHR33508:SF1 1 210 2.2E-59 T 22-04-2016 R615_RS11660 c9cc288ed108fffeeb21e16c9efa20c4 210 PANTHER PTHR33508 1 210 2.2E-59 T 22-04-2016 R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 Gene3D G3DSA:1.10.579.10 282 467 6.2E-74 T 22-04-2016 R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 PANTHER PTHR11455:SF18 1 469 7.4E-189 T 22-04-2016 R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 Gene3D G3DSA:3.40.50.620 2 147 1.1E-41 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 Pfam PF00875 DNA photolyase 4 174 7.4E-43 T 22-04-2016 IPR006050 DNA photolyase, N-terminal R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 Pfam PF03441 FAD binding domain of DNA photolyase 274 465 7.1E-81 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 PANTHER PTHR11455 1 469 7.4E-189 T 22-04-2016 R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 Gene3D G3DSA:1.25.40.80 201 281 8.5E-39 T 22-04-2016 R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 Gene3D G3DSA:1.25.40.80 148 163 8.5E-39 T 22-04-2016 R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 SUPERFAMILY SSF48173 195 467 1.44E-100 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 PRINTS PR00147 DNA photolyase signature 383 397 2.1E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 PRINTS PR00147 DNA photolyase signature 344 362 2.1E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 PRINTS PR00147 DNA photolyase signature 144 160 2.1E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 PRINTS PR00147 DNA photolyase signature 324 340 2.1E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 R615_RS03565 85f3a15c2c88dedfeba40b101ba8057d 471 SUPERFAMILY SSF52425 2 180 4.32E-47 T 22-04-2016 IPR006050 DNA photolyase, N-terminal R615_RS01330 ae33ce958b63cd8c7004b69222326bd4 721 SMART SM00460 462 532 3.8E-18 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS01330 ae33ce958b63cd8c7004b69222326bd4 721 PANTHER PTHR33490 281 568 1.7E-44 T 22-04-2016 R615_RS01330 ae33ce958b63cd8c7004b69222326bd4 721 PANTHER PTHR33490 16 236 1.7E-44 T 22-04-2016 R615_RS01330 ae33ce958b63cd8c7004b69222326bd4 721 SUPERFAMILY SSF54001 376 537 1.68E-36 T 22-04-2016 R615_RS01330 ae33ce958b63cd8c7004b69222326bd4 721 PANTHER PTHR33490:SF4 281 568 1.7E-44 T 22-04-2016 R615_RS01330 ae33ce958b63cd8c7004b69222326bd4 721 PANTHER PTHR33490:SF4 16 236 1.7E-44 T 22-04-2016 R615_RS01330 ae33ce958b63cd8c7004b69222326bd4 721 Pfam PF01841 Transglutaminase-like superfamily 414 530 6.1E-27 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS01330 ae33ce958b63cd8c7004b69222326bd4 721 Gene3D G3DSA:3.90.260.10 390 538 7.2E-26 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS04960 0f00dfb26c3c5dab4be8323ce6c5bdf8 145 Pfam PF02049 Flagellar hook-basal body complex protein FliE 66 145 2.8E-29 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 R615_RS04960 0f00dfb26c3c5dab4be8323ce6c5bdf8 145 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 56 144 3.3E-22 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 R615_RS04960 0f00dfb26c3c5dab4be8323ce6c5bdf8 145 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 109 125 1.1E-14 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 R615_RS04960 0f00dfb26c3c5dab4be8323ce6c5bdf8 145 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 74 90 1.1E-14 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 R615_RS04960 0f00dfb26c3c5dab4be8323ce6c5bdf8 145 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 130 143 1.1E-14 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 R615_RS04960 0f00dfb26c3c5dab4be8323ce6c5bdf8 145 PANTHER PTHR34653 32 145 7.5E-25 T 22-04-2016 R615_RS04960 0f00dfb26c3c5dab4be8323ce6c5bdf8 145 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 36 145 17.304 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 R615_RS10495 df215a12143a8f3279f720677f53fa77 103 Gene3D G3DSA:3.30.70.830 1 103 1.0E-44 T 22-04-2016 R615_RS10495 df215a12143a8f3279f720677f53fa77 103 SUPERFAMILY SSF102705 2 101 1.92E-24 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 R615_RS10495 df215a12143a8f3279f720677f53fa77 103 PANTHER PTHR13799:SF18 2 102 1.6E-43 T 22-04-2016 R615_RS10495 df215a12143a8f3279f720677f53fa77 103 PANTHER PTHR13799 2 102 1.6E-43 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 R615_RS15650 8773f575a8034a3292aad441795ac755 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.1E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS15650 8773f575a8034a3292aad441795ac755 295 SUPERFAMILY SSF46785 6 110 1.08E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS15650 8773f575a8034a3292aad441795ac755 295 Pfam PF03466 LysR substrate binding domain 92 292 2.5E-30 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS15650 8773f575a8034a3292aad441795ac755 295 Gene3D G3DSA:3.40.190.10 181 240 8.6E-4 T 22-04-2016 R615_RS15650 8773f575a8034a3292aad441795ac755 295 Gene3D G3DSA:1.10.10.10 6 82 7.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS15650 8773f575a8034a3292aad441795ac755 295 PANTHER PTHR30537 1 292 1.4E-62 T 22-04-2016 R615_RS15650 8773f575a8034a3292aad441795ac755 295 Gene3D G3DSA:3.40.190.10 95 180 4.9E-19 T 22-04-2016 R615_RS15650 8773f575a8034a3292aad441795ac755 295 SUPERFAMILY SSF53850 92 293 4.07E-34 T 22-04-2016 R615_RS14480 e387cffc10a9f1d01db9f08b8ef97fcb 374 SUPERFAMILY SSF53597 144 364 4.09E-57 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain R615_RS14480 e387cffc10a9f1d01db9f08b8ef97fcb 374 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 97 1.7E-19 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 R615_RS14480 e387cffc10a9f1d01db9f08b8ef97fcb 374 Pfam PF01872 RibD C-terminal domain 147 358 9.2E-47 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 R615_RS14480 e387cffc10a9f1d01db9f08b8ef97fcb 374 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 R615_RS14480 e387cffc10a9f1d01db9f08b8ef97fcb 374 PANTHER PTHR11079:SF10 4 228 4.3E-61 T 22-04-2016 R615_RS14480 e387cffc10a9f1d01db9f08b8ef97fcb 374 Gene3D G3DSA:3.40.430.10 129 366 4.1E-71 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain R615_RS14480 e387cffc10a9f1d01db9f08b8ef97fcb 374 PANTHER PTHR11079 4 228 4.3E-61 T 22-04-2016 R615_RS14480 e387cffc10a9f1d01db9f08b8ef97fcb 374 SUPERFAMILY SSF53927 3 145 6.02E-45 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 R615_RS14480 e387cffc10a9f1d01db9f08b8ef97fcb 374 PIRSF PIRSF006769 1 367 6.2E-123 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 R615_RS14480 e387cffc10a9f1d01db9f08b8ef97fcb 374 Gene3D G3DSA:3.40.140.10 2 128 6.1E-34 T 22-04-2016 R615_RS14480 e387cffc10a9f1d01db9f08b8ef97fcb 374 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 364 1.6E-56 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 R615_RS14480 e387cffc10a9f1d01db9f08b8ef97fcb 374 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 361 2.8E-117 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 R615_RS14355 6a9ab71bffb2f497084403056b3dd6f2 325 SUPERFAMILY SSF48452 207 316 8.49E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS14355 6a9ab71bffb2f497084403056b3dd6f2 325 Gene3D G3DSA:1.25.40.10 248 316 5.8E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS04415 4654d3061f91237bb8afc60c452dad1b 268 Pfam PF00849 RNA pseudouridylate synthase 11 169 3.8E-35 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS04415 4654d3061f91237bb8afc60c452dad1b 268 PANTHER PTHR11079:SF60 2 244 1.1E-71 T 22-04-2016 R615_RS04415 4654d3061f91237bb8afc60c452dad1b 268 SUPERFAMILY SSF55120 2 235 2.88E-60 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS04415 4654d3061f91237bb8afc60c452dad1b 268 PANTHER PTHR11079 2 244 1.1E-71 T 22-04-2016 R615_RS08095 aa540a141295448c2774f508d3c24149 456 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 314 3.1E-127 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 R615_RS08095 aa540a141295448c2774f508d3c24149 456 Gene3D G3DSA:1.20.120.640 308 390 8.5E-25 T 22-04-2016 R615_RS08095 aa540a141295448c2774f508d3c24149 456 SUPERFAMILY SSF52374 3 313 3.84E-94 T 22-04-2016 R615_RS08095 aa540a141295448c2774f508d3c24149 456 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 456 38.729 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 R615_RS08095 aa540a141295448c2774f508d3c24149 456 SMART SM00840 342 400 4.7E-28 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 R615_RS08095 aa540a141295448c2774f508d3c24149 456 PANTHER PTHR10890 1 453 2.6E-235 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 R615_RS08095 aa540a141295448c2774f508d3c24149 456 Pfam PF09190 DALR domain 342 400 7.8E-21 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 R615_RS08095 aa540a141295448c2774f508d3c24149 456 Gene3D G3DSA:3.40.50.620 21 305 6.3E-104 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS08095 aa540a141295448c2774f508d3c24149 456 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 455 4.7E-173 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 R615_RS08095 aa540a141295448c2774f508d3c24149 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 8.9E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 R615_RS08095 aa540a141295448c2774f508d3c24149 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 223 244 8.9E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 R615_RS08095 aa540a141295448c2774f508d3c24149 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 192 210 8.9E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 R615_RS08095 aa540a141295448c2774f508d3c24149 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 8.9E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 R615_RS08095 aa540a141295448c2774f508d3c24149 456 SUPERFAMILY SSF47323 317 455 7.32E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 Pfam PF13840 ACT domain 338 398 4.8E-15 T 22-04-2016 IPR027795 GATS-like ACT domain R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 402 2.0E-130 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 PANTHER PTHR21499:SF27 1 409 2.1E-172 T 22-04-2016 R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 SUPERFAMILY SSF55021 329 404 2.75E-24 T 22-04-2016 R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 Pfam PF00696 Amino acid kinase family 4 229 1.0E-49 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 PANTHER PTHR21499 1 409 2.1E-172 T 22-04-2016 R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 SUPERFAMILY SSF53633 4 241 2.75E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 SUPERFAMILY SSF55021 248 326 2.41E-18 T 22-04-2016 R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 Gene3D G3DSA:3.40.1160.10 1 244 6.8E-75 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 PIRSF PIRSF000726 58 409 9.5E-143 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 402 2.9E-118 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 R615_RS14340 7c549cf4aaaeaaabaaed2b9c6e50af0a 410 Pfam PF01842 ACT domain 269 326 3.7E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 R615_RS01900 e847b476815b0e305b2aee8495ebe8bd 191 Pfam PF11655 Protein of unknown function (DUF2589) 12 182 1.2E-28 T 22-04-2016 IPR024510 Protein of unknown function DUF2589 R615_RS01900 e847b476815b0e305b2aee8495ebe8bd 191 ProDom PD104924 XAC1607 AF0417 6 184 4.0E-19 T 22-04-2016 R615_RS01900 e847b476815b0e305b2aee8495ebe8bd 191 Gene3D G3DSA:2.170.15.10 96 165 1.1E-4 T 22-04-2016 IPR023307 Aerolysin-like toxin, beta complex domain R615_RS01495 9e1d9d5cec2e609d223c3879e03a7156 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 201 214 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS01495 9e1d9d5cec2e609d223c3879e03a7156 516 SUPERFAMILY SSF110921 395 502 7.45E-24 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS01495 9e1d9d5cec2e609d223c3879e03a7156 516 SMART SM00917 372 503 2.1E-38 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS01495 9e1d9d5cec2e609d223c3879e03a7156 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 372 501 4.6E-32 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS01495 9e1d9d5cec2e609d223c3879e03a7156 516 Gene3D G3DSA:3.20.20.70 3 348 6.9E-146 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS01495 9e1d9d5cec2e609d223c3879e03a7156 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 4 512 43.474 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS01495 9e1d9d5cec2e609d223c3879e03a7156 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 6 500 1.4E-219 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 R615_RS01495 9e1d9d5cec2e609d223c3879e03a7156 516 Pfam PF00682 HMGL-like 7 275 5.2E-97 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 R615_RS01495 9e1d9d5cec2e609d223c3879e03a7156 516 PANTHER PTHR10277:SF9 1 511 8.9E-241 T 22-04-2016 R615_RS01495 9e1d9d5cec2e609d223c3879e03a7156 516 PANTHER PTHR10277 1 511 8.9E-241 T 22-04-2016 R615_RS01495 9e1d9d5cec2e609d223c3879e03a7156 516 SUPERFAMILY SSF51569 3 293 5.68E-99 T 22-04-2016 R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 Gene3D G3DSA:1.10.287.950 244 309 2.1E-4 T 22-04-2016 R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 Gene3D G3DSA:1.10.287.950 310 510 2.9E-53 T 22-04-2016 R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 181 8.1E-9 T 22-04-2016 IPR024478 4HB MCP domain R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 SMART SM00304 211 265 1.1E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 PANTHER PTHR32089 48 155 9.2E-99 T 22-04-2016 R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 PANTHER PTHR32089 185 542 9.2E-99 T 22-04-2016 R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 7.7E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 7.7E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 7.7E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 539 3.0E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 SMART SM00283 280 541 3.0E-57 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 SUPERFAMILY SSF58104 233 541 4.84E-70 T 22-04-2016 R615_RS02875 ecbaabbb549034c0cabcba99d6e92074 542 Pfam PF00672 HAMP domain 192 261 3.3E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS08990 73895363e8cc135f39f21cfa2c5c83c2 270 PANTHER PTHR22748 3 270 3.1E-114 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 R615_RS08990 73895363e8cc135f39f21cfa2c5c83c2 270 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 268 2.5E-87 T 22-04-2016 R615_RS08990 73895363e8cc135f39f21cfa2c5c83c2 270 PANTHER PTHR22748:SF7 3 270 3.1E-114 T 22-04-2016 R615_RS08990 73895363e8cc135f39f21cfa2c5c83c2 270 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 262 2.7E-26 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase R615_RS08990 73895363e8cc135f39f21cfa2c5c83c2 270 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 R615_RS08990 73895363e8cc135f39f21cfa2c5c83c2 270 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 R615_RS08990 73895363e8cc135f39f21cfa2c5c83c2 270 Gene3D G3DSA:3.60.10.10 3 269 1.2E-72 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase R615_RS08990 73895363e8cc135f39f21cfa2c5c83c2 270 SUPERFAMILY SSF56219 3 269 4.19E-79 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase R615_RS08990 73895363e8cc135f39f21cfa2c5c83c2 270 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 269 3.7E-76 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 R615_RS02610 b6e36aa2789cedaf0b7aefc9c73b3e3d 512 Pfam PF00795 Carbon-nitrogen hydrolase 225 483 8.9E-30 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS02610 b6e36aa2789cedaf0b7aefc9c73b3e3d 512 PANTHER PTHR23088:SF12 206 506 1.5E-129 T 22-04-2016 R615_RS02610 b6e36aa2789cedaf0b7aefc9c73b3e3d 512 Gene3D G3DSA:3.40.630.30 6 142 8.2E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS02610 b6e36aa2789cedaf0b7aefc9c73b3e3d 512 SUPERFAMILY SSF56317 221 487 1.31E-54 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS02610 b6e36aa2789cedaf0b7aefc9c73b3e3d 512 PANTHER PTHR23088 206 506 1.5E-129 T 22-04-2016 R615_RS02610 b6e36aa2789cedaf0b7aefc9c73b3e3d 512 SUPERFAMILY SSF55729 4 139 1.15E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS02610 b6e36aa2789cedaf0b7aefc9c73b3e3d 512 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 368 388 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site R615_RS02610 b6e36aa2789cedaf0b7aefc9c73b3e3d 512 Gene3D G3DSA:3.60.110.10 217 502 1.2E-55 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS02610 b6e36aa2789cedaf0b7aefc9c73b3e3d 512 Pfam PF00583 Acetyltransferase (GNAT) family 55 138 6.2E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS12240 f5c99725179769ca2880e797e96c3d7a 374 PANTHER PTHR22893:SF9 323 363 4.9E-195 T 22-04-2016 R615_RS12240 f5c99725179769ca2880e797e96c3d7a 374 PANTHER PTHR22893:SF9 8 301 4.9E-195 T 22-04-2016 R615_RS12240 f5c99725179769ca2880e797e96c3d7a 374 SUPERFAMILY SSF51395 5 360 2.38E-100 T 22-04-2016 R615_RS12240 f5c99725179769ca2880e797e96c3d7a 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 361 7.3E-72 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 R615_RS12240 f5c99725179769ca2880e797e96c3d7a 374 Gene3D G3DSA:3.20.20.70 6 363 4.1E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS12240 f5c99725179769ca2880e797e96c3d7a 374 PANTHER PTHR22893 323 363 4.9E-195 T 22-04-2016 R615_RS12240 f5c99725179769ca2880e797e96c3d7a 374 PANTHER PTHR22893 8 301 4.9E-195 T 22-04-2016 R615_RS02385 77af9d6c63182c86f5d44aa5c47a4aab 574 Pfam PF08668 HDOD domain 24 134 7.2E-6 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS02385 77af9d6c63182c86f5d44aa5c47a4aab 574 Gene3D G3DSA:3.30.450.40 393 465 2.2E-7 T 22-04-2016 IPR029016 GAF domain-like R615_RS02385 77af9d6c63182c86f5d44aa5c47a4aab 574 Gene3D G3DSA:1.10.3150.10 15 131 6.9E-10 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS02385 77af9d6c63182c86f5d44aa5c47a4aab 574 SUPERFAMILY SSF109604 15 217 1.91E-13 T 22-04-2016 R615_RS02385 77af9d6c63182c86f5d44aa5c47a4aab 574 SUPERFAMILY SSF55781 409 557 9.32E-9 T 22-04-2016 IPR029016 GAF domain-like R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 9.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 9.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 9.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 9.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 9.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 9.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 9.9E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 SUPERFAMILY SSF82693 271 328 5.49E-24 T 22-04-2016 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 SUPERFAMILY SSF82714 716 799 1.23E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 Pfam PF00873 AcrB/AcrD/AcrF family 6 1030 1.8E-239 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 Gene3D G3DSA:3.30.70.1430 46 142 9.2E-24 T 22-04-2016 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1034 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 PANTHER PTHR32063 2 1034 0.0 T 22-04-2016 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 SUPERFAMILY SSF82714 185 269 1.96E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 Gene3D G3DSA:1.10.3850.10 817 1034 3.9E-49 T 22-04-2016 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 Gene3D G3DSA:1.10.3850.10 277 500 2.4E-65 T 22-04-2016 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 SUPERFAMILY SSF82866 801 1034 3.92E-46 T 22-04-2016 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 SUPERFAMILY SSF82866 294 498 1.44E-40 T 22-04-2016 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 SUPERFAMILY SSF82693 137 184 5.49E-24 T 22-04-2016 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 SUPERFAMILY SSF82693 46 128 4.19E-19 T 22-04-2016 R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 Gene3D G3DSA:3.30.2090.10 717 797 5.9E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 Gene3D G3DSA:3.30.2090.10 185 268 1.5E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS08805 a133c126ce54e406ab92aceb0e741e7d 1036 PANTHER PTHR32063:SF19 2 1034 0.0 T 22-04-2016 R615_RS06105 16089082cc6fdade5cabd5e034488223 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 33.377 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 R615_RS06105 16089082cc6fdade5cabd5e034488223 226 Gene3D G3DSA:3.40.50.300 6 221 5.5E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06105 16089082cc6fdade5cabd5e034488223 226 SUPERFAMILY SSF52540 6 222 1.98E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06105 16089082cc6fdade5cabd5e034488223 226 PANTHER PTHR21299 6 226 2.9E-67 T 22-04-2016 R615_RS06105 16089082cc6fdade5cabd5e034488223 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 8.3E-84 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 R615_RS06105 16089082cc6fdade5cabd5e034488223 226 Pfam PF02224 Cytidylate kinase 8 221 2.6E-78 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 R615_RS16545 a562f5c7c515c5c2a07e67e12a783321 163 Gene3D G3DSA:3.90.79.10 4 151 9.9E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS16545 a562f5c7c515c5c2a07e67e12a783321 163 PRINTS PR00502 NUDIX hydrolase family signature 33 47 8.1E-7 T 22-04-2016 IPR020476 NUDIX hydrolase R615_RS16545 a562f5c7c515c5c2a07e67e12a783321 163 PRINTS PR00502 NUDIX hydrolase family signature 47 62 8.1E-7 T 22-04-2016 IPR020476 NUDIX hydrolase R615_RS16545 a562f5c7c515c5c2a07e67e12a783321 163 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.018 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH R615_RS16545 a562f5c7c515c5c2a07e67e12a783321 163 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 R615_RS16545 a562f5c7c515c5c2a07e67e12a783321 163 Pfam PF00293 NUDIX domain 7 145 2.1E-25 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 R615_RS16545 a562f5c7c515c5c2a07e67e12a783321 163 SUPERFAMILY SSF55811 7 159 2.03E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS16545 a562f5c7c515c5c2a07e67e12a783321 163 PANTHER PTHR23114 1 160 1.6E-49 T 22-04-2016 R615_RS16475 a45a34b29a44c37990a0a3a0f2039aa2 294 PANTHER PTHR10361:SF24 10 282 3.7E-70 T 22-04-2016 R615_RS16475 a45a34b29a44c37990a0a3a0f2039aa2 294 PANTHER PTHR10361 10 282 3.7E-70 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 R615_RS16475 a45a34b29a44c37990a0a3a0f2039aa2 294 Pfam PF01758 Sodium Bile acid symporter family 11 194 5.9E-26 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 R615_RS00665 e951a38a4595a7de3ac929328375b0a4 184 PANTHER PTHR18895 8 183 3.4E-45 T 22-04-2016 R615_RS00665 e951a38a4595a7de3ac929328375b0a4 184 Gene3D G3DSA:3.40.50.150 6 181 5.4E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS00665 e951a38a4595a7de3ac929328375b0a4 184 SUPERFAMILY SSF53335 9 179 5.91E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS00665 e951a38a4595a7de3ac929328375b0a4 184 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 7 180 5.7E-51 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS00665 e951a38a4595a7de3ac929328375b0a4 184 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 121 127 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 R615_RS00665 e951a38a4595a7de3ac929328375b0a4 184 PANTHER PTHR18895:SF60 8 183 3.4E-45 T 22-04-2016 R615_RS00665 e951a38a4595a7de3ac929328375b0a4 184 PIRSF PIRSF004553 8 183 4.0E-48 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS00665 e951a38a4595a7de3ac929328375b0a4 184 Pfam PF03602 Conserved hypothetical protein 95 9 179 4.1E-54 T 22-04-2016 R615_RS05515 178618488753d3e032a014ce91c3e6a2 169 PANTHER PTHR34875:SF1 5 169 4.6E-43 T 22-04-2016 R615_RS05515 178618488753d3e032a014ce91c3e6a2 169 PANTHER PTHR34875 5 169 4.6E-43 T 22-04-2016 R615_RS05515 178618488753d3e032a014ce91c3e6a2 169 Gene3D G3DSA:3.30.70.260 87 168 2.9E-21 T 22-04-2016 R615_RS05515 178618488753d3e032a014ce91c3e6a2 169 SUPERFAMILY SSF55021 88 168 5.79E-13 T 22-04-2016 R615_RS05515 178618488753d3e032a014ce91c3e6a2 169 PIRSF PIRSF028103 1 169 7.1E-42 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 R615_RS05515 178618488753d3e032a014ce91c3e6a2 169 Pfam PF13740 ACT domain 92 121 3.5E-5 T 22-04-2016 R615_RS05515 178618488753d3e032a014ce91c3e6a2 169 Pfam PF13740 ACT domain 4 67 1.8E-13 T 22-04-2016 R615_RS05515 178618488753d3e032a014ce91c3e6a2 169 Gene3D G3DSA:3.30.70.260 3 70 1.1E-17 T 22-04-2016 R615_RS05515 178618488753d3e032a014ce91c3e6a2 169 SUPERFAMILY SSF55021 1 69 8.49E-12 T 22-04-2016 R615_RS12955 43a817f9af59e33bb33e8f5f90fc0532 361 PANTHER PTHR11075:SF9 1 358 4.7E-174 T 22-04-2016 R615_RS12955 43a817f9af59e33bb33e8f5f90fc0532 361 Pfam PF03462 PCRF domain 13 205 5.5E-73 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 R615_RS12955 43a817f9af59e33bb33e8f5f90fc0532 361 SUPERFAMILY SSF75620 12 355 5.1E-136 T 22-04-2016 R615_RS12955 43a817f9af59e33bb33e8f5f90fc0532 361 Gene3D G3DSA:3.30.160.20 213 290 3.6E-36 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain R615_RS12955 43a817f9af59e33bb33e8f5f90fc0532 361 Pfam PF00472 RF-1 domain 214 323 6.9E-43 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 R615_RS12955 43a817f9af59e33bb33e8f5f90fc0532 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 2.2E-168 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 R615_RS12955 43a817f9af59e33bb33e8f5f90fc0532 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 R615_RS12955 43a817f9af59e33bb33e8f5f90fc0532 361 Gene3D G3DSA:1.20.58.410 8 95 4.3E-21 T 22-04-2016 R615_RS12955 43a817f9af59e33bb33e8f5f90fc0532 361 SMART SM00937 66 180 6.2E-62 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 R615_RS12955 43a817f9af59e33bb33e8f5f90fc0532 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.543 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 R615_RS12955 43a817f9af59e33bb33e8f5f90fc0532 361 PANTHER PTHR11075 1 358 4.7E-174 T 22-04-2016 R615_RS09805 d0edf84d9c0d938da2786deafc70778a 115 PIRSF PIRSF000169 1 115 1.4E-44 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 R615_RS09805 d0edf84d9c0d938da2786deafc70778a 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 9.6E-38 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 R615_RS09805 d0edf84d9c0d938da2786deafc70778a 115 PANTHER PTHR38689:SF1 2 115 1.3E-50 T 22-04-2016 R615_RS09805 d0edf84d9c0d938da2786deafc70778a 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 106 1.5E-7 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 R615_RS09805 d0edf84d9c0d938da2786deafc70778a 115 PANTHER PTHR38689 2 115 1.3E-50 T 22-04-2016 R615_RS09805 d0edf84d9c0d938da2786deafc70778a 115 Gene3D G3DSA:1.20.1300.10 1 114 1.7E-39 T 22-04-2016 R615_RS09805 d0edf84d9c0d938da2786deafc70778a 115 SUPERFAMILY SSF81343 5 114 4.14E-30 T 22-04-2016 R615_RS09460 c08dd73f81ca752a18e4a7c5570a9fb7 257 PANTHER PTHR10133 2 252 8.6E-67 T 22-04-2016 R615_RS09460 c08dd73f81ca752a18e4a7c5570a9fb7 257 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 163 252 7.4E-20 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 R615_RS09460 c08dd73f81ca752a18e4a7c5570a9fb7 257 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 2 161 1.6E-31 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 R615_RS09460 c08dd73f81ca752a18e4a7c5570a9fb7 257 Gene3D G3DSA:1.10.150.20 177 237 8.4E-16 T 22-04-2016 R615_RS09460 c08dd73f81ca752a18e4a7c5570a9fb7 257 SUPERFAMILY SSF88723 2 161 7.29E-33 T 22-04-2016 IPR029060 PIN domain-like R615_RS09460 c08dd73f81ca752a18e4a7c5570a9fb7 257 SUPERFAMILY SSF47807 161 253 1.94E-20 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 R615_RS09460 c08dd73f81ca752a18e4a7c5570a9fb7 257 SMART SM00475 1 252 8.0E-48 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 R615_RS09460 c08dd73f81ca752a18e4a7c5570a9fb7 257 Gene3D G3DSA:3.40.50.1010 2 176 6.6E-44 T 22-04-2016 IPR029060 PIN domain-like R615_RS09460 c08dd73f81ca752a18e4a7c5570a9fb7 257 SMART SM00279 164 199 5.9E-5 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 R615_RS04290 74fe7f0ce077292d68d4e82065fed1f4 131 Pfam PF13279 Thioesterase-like superfamily 9 123 2.2E-12 T 22-04-2016 R615_RS04290 74fe7f0ce077292d68d4e82065fed1f4 131 Gene3D G3DSA:3.10.129.10 5 128 8.9E-38 T 22-04-2016 IPR029069 HotDog domain R615_RS04290 74fe7f0ce077292d68d4e82065fed1f4 131 PANTHER PTHR31793 9 128 7.6E-30 T 22-04-2016 R615_RS04290 74fe7f0ce077292d68d4e82065fed1f4 131 SUPERFAMILY SSF54637 1 128 2.67E-36 T 22-04-2016 IPR029069 HotDog domain R615_RS04290 74fe7f0ce077292d68d4e82065fed1f4 131 PANTHER PTHR31793:SF1 9 128 7.6E-30 T 22-04-2016 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 63 88 3.4E-69 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 404 422 3.4E-69 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 468 485 3.4E-69 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 155 174 3.4E-69 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 445 460 3.4E-69 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 380 398 3.4E-69 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 137 155 3.4E-69 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 283 302 3.4E-69 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 253 269 3.4E-69 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 SUPERFAMILY SSF56235 41 567 3.28E-164 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 Pfam PF01019 Gamma-glutamyltranspeptidase 56 562 3.6E-163 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 PANTHER PTHR11686:SF9 42 573 1.7E-191 T 22-04-2016 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 43 561 5.3E-143 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 R615_RS00960 015a334fc22929a2bbe90642df99ad64 573 PANTHER PTHR11686 42 573 1.7E-191 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 R615_RS03655 d2ca4dff619743ec1d1f5ea7d9fcc3b3 505 PIRSF PIRSF006429 4 504 8.4E-158 T 22-04-2016 IPR024188 Glutamate synthase large subunit-like protein R615_RS03655 d2ca4dff619743ec1d1f5ea7d9fcc3b3 505 Pfam PF01645 Conserved region in glutamate synthase 136 466 1.7E-85 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 R615_RS03655 d2ca4dff619743ec1d1f5ea7d9fcc3b3 505 Gene3D G3DSA:3.20.20.70 40 502 7.6E-118 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS03655 d2ca4dff619743ec1d1f5ea7d9fcc3b3 505 SUPERFAMILY SSF51395 9 493 1.71E-123 T 22-04-2016 R615_RS03655 d2ca4dff619743ec1d1f5ea7d9fcc3b3 505 PANTHER PTHR11938:SF50 151 479 1.4E-63 T 22-04-2016 R615_RS03655 d2ca4dff619743ec1d1f5ea7d9fcc3b3 505 PANTHER PTHR11938 151 479 1.4E-63 T 22-04-2016 R615_RS13355 b571bccd2f9d721b4b0219fa620e5ec0 211 Gene3D G3DSA:2.60.120.10 11 125 6.6E-16 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS13355 b571bccd2f9d721b4b0219fa620e5ec0 211 SMART SM00100 23 142 2.4E-4 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS13355 b571bccd2f9d721b4b0219fa620e5ec0 211 SUPERFAMILY SSF51206 5 125 2.36E-18 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like R615_RS13355 b571bccd2f9d721b4b0219fa620e5ec0 211 Pfam PF00027 Cyclic nucleotide-binding domain 49 124 2.3E-11 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS10570 e4e7f6b31764aa3254fe8fb4fd4f4193 162 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.2E-17 T 22-04-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- R615_RS10570 e4e7f6b31764aa3254fe8fb4fd4f4193 162 PANTHER PTHR39452:SF1 1 155 1.7E-31 T 22-04-2016 R615_RS10570 e4e7f6b31764aa3254fe8fb4fd4f4193 162 PANTHER PTHR39452 1 155 1.7E-31 T 22-04-2016 R615_RS10570 e4e7f6b31764aa3254fe8fb4fd4f4193 162 Gene3D G3DSA:3.40.1550.10 1 151 2.4E-28 T 22-04-2016 IPR028976 CheC-like domain R615_RS10570 e4e7f6b31764aa3254fe8fb4fd4f4193 162 SUPERFAMILY SSF103039 1 150 1.31E-26 T 22-04-2016 IPR028976 CheC-like domain R615_RS10595 1bb4944fee01bbdd85dbd994770f3432 153 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 139 3.6E-33 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 R615_RS10595 1bb4944fee01bbdd85dbd994770f3432 153 Gene3D G3DSA:3.40.50.10110 1 142 3.1E-37 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 R615_RS10595 1bb4944fee01bbdd85dbd994770f3432 153 SUPERFAMILY SSF102400 1 143 9.68E-34 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 R615_RS10595 1bb4944fee01bbdd85dbd994770f3432 153 PANTHER PTHR38767 2 146 1.3E-23 T 22-04-2016 R615_RS10280 ae235c19f4ce241fa274b46d56020653 348 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 338 25.943 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 R615_RS10280 ae235c19f4ce241fa274b46d56020653 348 PANTHER PTHR30578 7 344 6.9E-127 T 22-04-2016 R615_RS10280 ae235c19f4ce241fa274b46d56020653 348 PANTHER PTHR30578:SF0 7 344 6.9E-127 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 R615_RS10280 ae235c19f4ce241fa274b46d56020653 348 Pfam PF03116 NQR2, RnfD, RnfE family 7 336 1.2E-101 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 R615_RS10280 ae235c19f4ce241fa274b46d56020653 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 337 3.1E-118 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 R615_RS13215 5744528d36c7c49bcee1890de4aa1ea0 237 PANTHER PTHR21343 1 209 8.8E-76 T 22-04-2016 R615_RS13215 5744528d36c7c49bcee1890de4aa1ea0 237 Gene3D G3DSA:3.40.50.300 1 221 9.5E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13215 5744528d36c7c49bcee1890de4aa1ea0 237 PANTHER PTHR21343:SF13 1 209 8.8E-76 T 22-04-2016 R615_RS13215 5744528d36c7c49bcee1890de4aa1ea0 237 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 176 4.2E-44 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 R615_RS13215 5744528d36c7c49bcee1890de4aa1ea0 237 SUPERFAMILY SSF52540 1 221 2.18E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13215 5744528d36c7c49bcee1890de4aa1ea0 237 PIRSF PIRSF006755 1 234 6.1E-64 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 R615_RS13215 5744528d36c7c49bcee1890de4aa1ea0 237 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 227 27.624 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 R615_RS13215 5744528d36c7c49bcee1890de4aa1ea0 237 Pfam PF13500 AAA domain 2 209 2.2E-35 T 22-04-2016 R615_RS14765 14b11cc4e520e3036e0de6f2d72df324 183 SUPERFAMILY SSF56235 1 172 2.65E-57 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal R615_RS14765 14b11cc4e520e3036e0de6f2d72df324 183 PANTHER PTHR32194 1 182 1.3E-126 T 22-04-2016 R615_RS14765 14b11cc4e520e3036e0de6f2d72df324 183 Gene3D G3DSA:3.60.20.10 2 173 1.8E-85 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal R615_RS14765 14b11cc4e520e3036e0de6f2d72df324 183 PIRSF PIRSF039093 1 175 1.3E-86 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 R615_RS14765 14b11cc4e520e3036e0de6f2d72df324 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.536 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 R615_RS14765 14b11cc4e520e3036e0de6f2d72df324 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.2E-85 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 R615_RS14765 14b11cc4e520e3036e0de6f2d72df324 183 Pfam PF00227 Proteasome subunit 2 171 7.3E-22 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 R615_RS10835 4e2ec1c4b6c92f214366295b82b66a5d 217 Gene3D G3DSA:2.40.160.20 29 158 3.4E-9 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS10835 4e2ec1c4b6c92f214366295b82b66a5d 217 Pfam PF13505 Outer membrane protein beta-barrel domain 5 177 2.4E-11 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel R615_RS10835 4e2ec1c4b6c92f214366295b82b66a5d 217 SUPERFAMILY SSF56925 203 215 4.71E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS10835 4e2ec1c4b6c92f214366295b82b66a5d 217 SUPERFAMILY SSF56925 29 171 4.71E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS11530 5b0834087f97e41a55b1950a981ecba1 318 SUPERFAMILY SSF56300 7 285 6.33E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS11530 5b0834087f97e41a55b1950a981ecba1 318 PANTHER PTHR11668:SF281 5 207 2.3E-14 T 22-04-2016 R615_RS11530 5b0834087f97e41a55b1950a981ecba1 318 PANTHER PTHR11668 5 207 2.3E-14 T 22-04-2016 R615_RS11530 5b0834087f97e41a55b1950a981ecba1 318 Pfam PF00149 Calcineurin-like phosphoesterase 7 162 2.6E-9 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 R615_RS11530 5b0834087f97e41a55b1950a981ecba1 318 Gene3D G3DSA:3.60.21.10 200 303 2.9E-39 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS11530 5b0834087f97e41a55b1950a981ecba1 318 Gene3D G3DSA:3.60.21.10 5 160 2.9E-39 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS17370 3f972e032ac8a2684406208ab77abf14 894 Gene3D G3DSA:4.10.1080.10 5 158 2.3E-13 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17370 3f972e032ac8a2684406208ab77abf14 894 SUPERFAMILY SSF110296 429 513 9.94E-9 T 22-04-2016 R615_RS17370 3f972e032ac8a2684406208ab77abf14 894 SUPERFAMILY SSF110296 193 370 9.94E-9 T 22-04-2016 R615_RS17370 3f972e032ac8a2684406208ab77abf14 894 SUPERFAMILY SSF50939 361 540 1.44E-13 T 22-04-2016 IPR011040 Sialidases R615_RS17370 3f972e032ac8a2684406208ab77abf14 894 SUPERFAMILY SSF103647 28 162 3.53E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17370 3f972e032ac8a2684406208ab77abf14 894 Gene3D G3DSA:2.120.10.10 385 539 1.3E-16 T 22-04-2016 IPR011040 Sialidases R615_RS17370 3f972e032ac8a2684406208ab77abf14 894 Gene3D G3DSA:2.120.10.10 192 317 1.3E-16 T 22-04-2016 IPR011040 Sialidases R615_RS02490 194a4addbf6b376137fd749da9bd6b19 288 PANTHER PTHR30537 1 288 8.9E-141 T 22-04-2016 R615_RS02490 194a4addbf6b376137fd749da9bd6b19 288 Pfam PF03466 LysR substrate binding domain 90 288 4.7E-48 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS02490 194a4addbf6b376137fd749da9bd6b19 288 Gene3D G3DSA:1.10.10.10 4 86 9.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS02490 194a4addbf6b376137fd749da9bd6b19 288 SUPERFAMILY SSF46785 3 112 1.02E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS02490 194a4addbf6b376137fd749da9bd6b19 288 PANTHER PTHR30537:SF10 1 288 8.9E-141 T 22-04-2016 R615_RS02490 194a4addbf6b376137fd749da9bd6b19 288 Gene3D G3DSA:3.40.190.10 177 254 5.6E-20 T 22-04-2016 R615_RS02490 194a4addbf6b376137fd749da9bd6b19 288 SUPERFAMILY SSF53850 90 288 3.98E-49 T 22-04-2016 R615_RS02490 194a4addbf6b376137fd749da9bd6b19 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 1.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS02490 194a4addbf6b376137fd749da9bd6b19 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS02490 194a4addbf6b376137fd749da9bd6b19 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS02490 194a4addbf6b376137fd749da9bd6b19 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS02490 194a4addbf6b376137fd749da9bd6b19 288 Gene3D G3DSA:3.40.190.10 92 176 2.9E-24 T 22-04-2016 R615_RS05940 51f12607dec6eac9f365c00cc18b7d28 310 Pfam PF05175 Methyltransferase small domain 136 227 2.1E-18 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 R615_RS05940 51f12607dec6eac9f365c00cc18b7d28 310 PIRSF PIRSF037167 1 308 4.7E-128 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 R615_RS05940 51f12607dec6eac9f365c00cc18b7d28 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 7 302 48.7 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 R615_RS05940 51f12607dec6eac9f365c00cc18b7d28 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 14 296 1.1E-121 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 R615_RS05940 51f12607dec6eac9f365c00cc18b7d28 310 PANTHER PTHR18895 11 301 5.3E-132 T 22-04-2016 R615_RS05940 51f12607dec6eac9f365c00cc18b7d28 310 Gene3D G3DSA:1.10.8.10 16 106 3.7E-7 T 22-04-2016 R615_RS05940 51f12607dec6eac9f365c00cc18b7d28 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 288 7.1E-81 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 R615_RS05940 51f12607dec6eac9f365c00cc18b7d28 310 Gene3D G3DSA:3.40.50.150 109 291 1.2E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS05940 51f12607dec6eac9f365c00cc18b7d28 310 PANTHER PTHR18895:SF66 11 301 5.3E-132 T 22-04-2016 R615_RS05940 51f12607dec6eac9f365c00cc18b7d28 310 SUPERFAMILY SSF53335 17 295 5.06E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS05940 51f12607dec6eac9f365c00cc18b7d28 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 206 212 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 R615_RS10175 dbffcccf63edea4ffc446865d4b053f0 483 PANTHER PTHR11699:SF216 41 481 7.1E-185 T 22-04-2016 R615_RS10175 dbffcccf63edea4ffc446865d4b053f0 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 225 232 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 R615_RS10175 dbffcccf63edea4ffc446865d4b053f0 483 Pfam PF00171 Aldehyde dehydrogenase family 33 450 2.8E-99 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 R615_RS10175 dbffcccf63edea4ffc446865d4b053f0 483 PANTHER PTHR11699 41 481 7.1E-185 T 22-04-2016 R615_RS10175 dbffcccf63edea4ffc446865d4b053f0 483 PIRSF PIRSF036492 3 482 2.0E-176 T 22-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 R615_RS10175 dbffcccf63edea4ffc446865d4b053f0 483 Gene3D G3DSA:3.40.605.10 32 240 1.0E-57 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 R615_RS10175 dbffcccf63edea4ffc446865d4b053f0 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 253 264 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 R615_RS10175 dbffcccf63edea4ffc446865d4b053f0 483 Gene3D G3DSA:3.40.309.10 241 432 1.6E-64 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 R615_RS10175 dbffcccf63edea4ffc446865d4b053f0 483 SUPERFAMILY SSF53720 32 453 5.37E-123 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 Gene3D G3DSA:3.30.2090.10 749 834 9.1E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 Gene3D G3DSA:3.30.2090.10 197 277 2.2E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 Pfam PF00873 AcrB/AcrD/AcrF family 22 1061 1.3E-153 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 SUPERFAMILY SSF82714 197 277 6.54E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 SUPERFAMILY SSF82693 50 144 1.62E-17 T 22-04-2016 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 SUPERFAMILY SSF82693 585 700 3.92E-13 T 22-04-2016 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 PANTHER PTHR32063 12 1069 0.0 T 22-04-2016 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 SUPERFAMILY SSF82866 308 508 1.7E-38 T 22-04-2016 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 SUPERFAMILY SSF82866 835 1068 4.19E-42 T 22-04-2016 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 Gene3D G3DSA:3.30.70.1430 590 698 1.1E-11 T 22-04-2016 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 48 66 4.3E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 349 372 4.3E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 482 505 4.3E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 4.3E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 20 44 4.3E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 457 480 4.3E-26 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 SUPERFAMILY SSF82714 749 834 1.57E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 SUPERFAMILY SSF82693 151 194 2.79E-11 T 22-04-2016 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 SUPERFAMILY SSF82693 286 341 2.79E-11 T 22-04-2016 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 Gene3D G3DSA:3.30.70.1430 50 152 2.2E-16 T 22-04-2016 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 Gene3D G3DSA:1.20.1640.10 303 513 9.0E-45 T 22-04-2016 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 PANTHER PTHR32063:SF16 12 1069 0.0 T 22-04-2016 R615_RS10525 fdc3ca259c45fbe6519043175f91018b 1069 Gene3D G3DSA:1.10.3850.10 840 1064 3.1E-71 T 22-04-2016 R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 SMART SM00487 26 224 2.1E-63 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 Pfam PF03880 DbpA RNA binding domain 502 572 1.5E-20 T 22-04-2016 IPR005580 DbpA, RNA-binding domain R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 Pfam PF00270 DEAD/DEAH box helicase 32 197 2.7E-49 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 Gene3D G3DSA:3.40.50.300 214 380 4.2E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 PANTHER PTHR24031:SF261 9 479 7.6E-220 T 22-04-2016 R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 PANTHER PTHR24031:SF261 537 626 7.6E-220 T 22-04-2016 R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 574 44.008 T 22-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 PANTHER PTHR24031 9 479 7.6E-220 T 22-04-2016 R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 PANTHER PTHR24031 537 626 7.6E-220 T 22-04-2016 R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 Gene3D G3DSA:3.40.50.300 6 213 3.9E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 SUPERFAMILY SSF52540 75 362 2.7E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 SMART SM00490 260 341 1.9E-33 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS04115 a626d5ed915541058da48f5df2b4a566 627 Pfam PF00271 Helicase conserved C-terminal domain 235 341 3.8E-29 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS06180 44308e8cbda4428670a17a93f77a8753 267 SUPERFAMILY SSF53448 5 223 1.97E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS06180 44308e8cbda4428670a17a93f77a8753 267 Pfam PF00535 Glycosyl transferase family 2 8 135 9.0E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like R615_RS06180 44308e8cbda4428670a17a93f77a8753 267 PANTHER PTHR22916 2 267 2.0E-50 T 22-04-2016 R615_RS06180 44308e8cbda4428670a17a93f77a8753 267 Gene3D G3DSA:3.90.550.10 5 226 5.6E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS05785 6a8338be976037878efc57d86114397b 443 SUPERFAMILY SSF101960 22 428 2.35E-97 T 22-04-2016 R615_RS05785 6a8338be976037878efc57d86114397b 443 PANTHER PTHR30508 31 441 2.7E-111 T 22-04-2016 R615_RS05785 6a8338be976037878efc57d86114397b 443 PANTHER PTHR30508:SF0 31 441 2.7E-111 T 22-04-2016 R615_RS05785 6a8338be976037878efc57d86114397b 443 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 143 416 1.8E-78 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 R615_RS05785 6a8338be976037878efc57d86114397b 443 Pfam PF01458 Uncharacterized protein family (UPF0051) 179 403 1.7E-71 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 R615_RS06565 21bbfa90ee822a2e4e58e98abab63296 117 Pfam PF00453 Ribosomal protein L20 3 109 1.1E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 R615_RS06565 21bbfa90ee822a2e4e58e98abab63296 117 Gene3D G3DSA:1.10.1900.20 55 116 8.7E-31 T 22-04-2016 R615_RS06565 21bbfa90ee822a2e4e58e98abab63296 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.2E-52 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 R615_RS06565 21bbfa90ee822a2e4e58e98abab63296 117 PANTHER PTHR10986 2 117 2.2E-66 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 R615_RS06565 21bbfa90ee822a2e4e58e98abab63296 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 R615_RS06565 21bbfa90ee822a2e4e58e98abab63296 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.208 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 R615_RS06565 21bbfa90ee822a2e4e58e98abab63296 117 SUPERFAMILY SSF74731 3 115 5.1E-50 T 22-04-2016 R615_RS06565 21bbfa90ee822a2e4e58e98abab63296 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 9.0E-14 T 22-04-2016 R615_RS06565 21bbfa90ee822a2e4e58e98abab63296 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.6E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 R615_RS06565 21bbfa90ee822a2e4e58e98abab63296 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.6E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 R615_RS06565 21bbfa90ee822a2e4e58e98abab63296 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.6E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 R615_RS06565 21bbfa90ee822a2e4e58e98abab63296 117 PANTHER PTHR10986:SF12 2 117 2.2E-66 T 22-04-2016 R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 SUPERFAMILY SSF141868 993 1221 4.71E-46 T 22-04-2016 IPR001633 EAL domain R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 SMART SM00267 804 975 1.8E-37 T 22-04-2016 IPR000160 GGDEF domain R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 812 973 5.2E-28 T 22-04-2016 IPR000160 GGDEF domain R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 Gene3D G3DSA:3.20.20.450 990 1221 4.6E-49 T 22-04-2016 IPR001633 EAL domain R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 Pfam PF00990 Diguanylate cyclase, GGDEF domain 815 970 2.9E-30 T 22-04-2016 IPR000160 GGDEF domain R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 Pfam PF00563 EAL domain 994 1221 5.9E-43 T 22-04-2016 IPR001633 EAL domain R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 SUPERFAMILY SSF55073 820 976 8.63E-35 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 Gene3D G3DSA:3.30.70.270 817 976 2.5E-35 T 22-04-2016 R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 SUPERFAMILY SSF141371 4 95 5.1E-7 T 22-04-2016 R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 Pfam PF07793 Protein of unknown function (DUF1631) 143 806 2.6E-65 T 22-04-2016 IPR012434 Protein of unknown function DUF1631 R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 PANTHER PTHR33121:SF10 934 1221 5.5E-30 T 22-04-2016 R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 PANTHER PTHR33121:SF10 848 910 5.5E-30 T 22-04-2016 R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 PANTHER PTHR33121 934 1221 5.5E-30 T 22-04-2016 R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 PANTHER PTHR33121 848 910 5.5E-30 T 22-04-2016 R615_RS15720 829af87546e186bcbf4018ae948cc995 1236 SMART SM00052 987 1229 3.2E-33 T 22-04-2016 IPR001633 EAL domain R615_RS01195 e12f9cae2b75ad4c889854f1bcf0673b 164 Gene3D G3DSA:3.40.50.2020 5 144 1.1E-38 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS01195 e12f9cae2b75ad4c889854f1bcf0673b 164 SUPERFAMILY SSF53271 4 144 1.1E-35 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS01195 e12f9cae2b75ad4c889854f1bcf0673b 164 PANTHER PTHR11608 1 153 3.8E-54 T 22-04-2016 R615_RS01195 e12f9cae2b75ad4c889854f1bcf0673b 164 Pfam PF00156 Phosphoribosyl transferase domain 16 133 3.5E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 R615_RS06545 cbccfe85dcf0419440490f04c6337abf 418 SUPERFAMILY SSF51445 135 303 8.04E-15 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily R615_RS06545 cbccfe85dcf0419440490f04c6337abf 418 Pfam PF02449 Beta-galactosidase 125 245 2.5E-9 T 22-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 R615_RS06545 cbccfe85dcf0419440490f04c6337abf 418 Gene3D G3DSA:3.20.20.80 140 300 2.4E-14 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 SUPERFAMILY SSF50249 640 728 2.39E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 Pfam PF16921 Tex protein YqgF-like domain 326 452 9.0E-54 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 SMART SM00316 650 721 1.9E-23 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 SUPERFAMILY SSF47781 471 558 8.56E-27 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 SUPERFAMILY SSF47781 561 633 5.78E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 Gene3D G3DSA:1.10.150.310 500 631 2.6E-44 T 22-04-2016 IPR023097 Tex RuvX-like domain R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 PANTHER PTHR10724:SF1 1 748 0.0 T 22-04-2016 R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 Pfam PF00575 S1 RNA binding domain 650 721 2.6E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 Gene3D G3DSA:2.40.50.140 642 723 9.7E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 Pfam PF09371 Tex-like protein N-terminal domain 10 192 5.7E-69 T 22-04-2016 IPR018974 Tex-like protein, N-terminal R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 SUPERFAMILY SSF53098 322 470 1.14E-52 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 Gene3D G3DSA:1.10.3500.10 111 322 2.8E-102 T 22-04-2016 IPR023323 Tex-like domain R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 Gene3D G3DSA:1.10.3500.10 452 499 2.8E-102 T 22-04-2016 IPR023323 Tex-like domain R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 Gene3D G3DSA:3.30.420.140 326 451 8.8E-53 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 SUPERFAMILY SSF158832 4 321 1.96E-118 T 22-04-2016 R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 SMART SM00732 326 425 3.4E-36 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 PANTHER PTHR10724 1 748 0.0 T 22-04-2016 R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 Gene3D G3DSA:1.10.10.650 4 110 1.2E-46 T 22-04-2016 IPR023319 Tex-like protein, HTH domain R615_RS16705 4af5bc6d444ea6921153bae53596e3e7 780 Pfam PF12836 Helix-hairpin-helix motif 492 556 9.9E-27 T 22-04-2016 R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 Gene3D G3DSA:1.20.200.10 135 398 3.0E-88 T 22-04-2016 R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 SUPERFAMILY SSF48557 2 452 1.15E-135 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 458 73.261 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 Pfam PF00206 Lyase 13 338 7.1E-96 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 PRINTS PR00145 Argininosuccinate lyase family signature 313 329 9.2E-8 T 22-04-2016 R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 PRINTS PR00145 Argininosuccinate lyase family signature 129 151 9.2E-8 T 22-04-2016 R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 PRINTS PR00145 Argininosuccinate lyase family signature 171 191 9.2E-8 T 22-04-2016 R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 Pfam PF10415 Fumarase C C-terminus 404 457 4.0E-18 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 PANTHER PTHR11444:SF22 1 453 4.0E-254 T 22-04-2016 R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 Gene3D G3DSA:1.10.40.30 404 459 2.4E-19 T 22-04-2016 R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 ProSitePatterns PS00163 Fumarate lyases signature. 313 322 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 PANTHER PTHR11444 1 453 4.0E-254 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 PRINTS PR00149 Fumarate lyase superfamily signature 313 329 4.6E-31 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 PRINTS PR00149 Fumarate lyase superfamily signature 130 148 4.6E-31 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 PRINTS PR00149 Fumarate lyase superfamily signature 176 194 4.6E-31 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 PRINTS PR00149 Fumarate lyase superfamily signature 267 294 4.6E-31 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS14535 99bdb7a4fa6a9c782952ef59e5112140 461 Gene3D G3DSA:1.10.275.10 4 134 1.1E-48 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 SUPERFAMILY SSF55347 178 481 2.03E-115 T 22-04-2016 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 183 7.0E-52 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 173 179 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 PANTHER PTHR23429 1 484 2.4E-211 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 Gene3D G3DSA:3.30.360.10 183 481 1.1E-125 T 22-04-2016 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 SUPERFAMILY SSF51735 3 186 4.53E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 185 481 3.9E-119 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 8 483 8.2E-175 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 PIRSF PIRSF000110 1 485 7.7E-170 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 PANTHER PTHR23429:SF0 1 484 2.4E-211 T 22-04-2016 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 139 152 2.5E-45 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 163 191 2.5E-45 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 233 249 2.5E-45 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 215 232 2.5E-45 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 324 350 2.5E-45 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 Gene3D G3DSA:3.40.50.720 6 182 2.7E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06915 64fcbfbe1eced8cb5ba7dd6e4becc828 485 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 483 81.461 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 R615_RS15750 cc6526f67488a79c754587d7cfbed9a4 131 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15750 cc6526f67488a79c754587d7cfbed9a4 131 Pfam PF01196 Ribosomal protein L17 20 116 2.1E-33 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15750 cc6526f67488a79c754587d7cfbed9a4 131 PANTHER PTHR14413 1 119 2.0E-64 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15750 cc6526f67488a79c754587d7cfbed9a4 131 Gene3D G3DSA:3.90.1030.10 1 117 6.1E-49 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15750 cc6526f67488a79c754587d7cfbed9a4 131 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.916 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15750 cc6526f67488a79c754587d7cfbed9a4 131 SUPERFAMILY SSF64263 1 119 1.57E-50 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15750 cc6526f67488a79c754587d7cfbed9a4 131 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.2E-47 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS11335 2b4d6e5e2fda3bb49feb51ab115488fb 356 PANTHER PTHR22893 6 356 1.4E-177 T 22-04-2016 R615_RS11335 2b4d6e5e2fda3bb49feb51ab115488fb 356 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 335 1.1E-85 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 R615_RS11335 2b4d6e5e2fda3bb49feb51ab115488fb 356 SUPERFAMILY SSF51395 3 355 3.18E-121 T 22-04-2016 R615_RS11335 2b4d6e5e2fda3bb49feb51ab115488fb 356 Gene3D G3DSA:3.20.20.70 5 356 6.5E-131 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS11335 2b4d6e5e2fda3bb49feb51ab115488fb 356 PANTHER PTHR22893:SF14 6 356 1.4E-177 T 22-04-2016 R615_RS13865 7aafb241ad0d638e399d7af56e193c31 348 PANTHER PTHR11922:SF5 1 340 2.1E-104 T 22-04-2016 R615_RS13865 7aafb241ad0d638e399d7af56e193c31 348 SUPERFAMILY SSF47648 1 67 5.23E-20 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain R615_RS13865 7aafb241ad0d638e399d7af56e193c31 348 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 64 2.4E-18 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain R615_RS13865 7aafb241ad0d638e399d7af56e193c31 348 Pfam PF00591 Glycosyl transferase family, a/b domain 74 328 1.2E-96 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 R615_RS13865 7aafb241ad0d638e399d7af56e193c31 348 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 337 1.3E-120 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 R615_RS13865 7aafb241ad0d638e399d7af56e193c31 348 Gene3D G3DSA:1.20.970.10 5 69 1.2E-25 T 22-04-2016 R615_RS13865 7aafb241ad0d638e399d7af56e193c31 348 SUPERFAMILY SSF52418 74 341 1.18E-89 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 R615_RS13865 7aafb241ad0d638e399d7af56e193c31 348 Gene3D G3DSA:3.40.1030.10 73 340 1.2E-99 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 R615_RS13865 7aafb241ad0d638e399d7af56e193c31 348 PANTHER PTHR11922 1 340 2.1E-104 T 22-04-2016 R615_RS13865 7aafb241ad0d638e399d7af56e193c31 348 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 338 37.748 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 Gene3D G3DSA:2.40.30.10 313 406 9.5E-45 T 22-04-2016 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 Gene3D G3DSA:3.40.50.300 6 224 1.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 142 2.3E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 Pfam PF03143 Elongation factor Tu C-terminal domain 311 405 5.7E-32 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 Gene3D G3DSA:2.40.30.10 225 311 1.0E-33 T 22-04-2016 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 SUPERFAMILY SSF50447 218 314 2.36E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 PANTHER PTHR23115 1 406 2.1E-251 T 22-04-2016 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 406 6.8E-215 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 SUPERFAMILY SSF50465 311 406 8.92E-34 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 407 57.582 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 SUPERFAMILY SSF52540 6 232 7.41E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 Pfam PF03144 Elongation factor Tu domain 2 238 306 2.8E-15 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 PANTHER PTHR23115:SF151 1 406 2.1E-251 T 22-04-2016 R615_RS15950 5d90bc5b95158d59705e34039d373b16 407 Pfam PF00009 Elongation factor Tu GTP binding domain 10 214 5.4E-56 T 22-04-2016 R615_RS07570 bf4326128596c2feeac8b8ec0fedfff6 201 SUPERFAMILY SSF46626 13 195 1.61E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS07570 bf4326128596c2feeac8b8ec0fedfff6 201 PANTHER PTHR10422:SF23 26 159 3.1E-81 T 22-04-2016 R615_RS07570 bf4326128596c2feeac8b8ec0fedfff6 201 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 178 7.6E-81 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO R615_RS07570 bf4326128596c2feeac8b8ec0fedfff6 201 PANTHER PTHR10422 26 159 3.1E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 R615_RS07570 bf4326128596c2feeac8b8ec0fedfff6 201 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 4 175 4.2E-82 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO R615_RS07570 bf4326128596c2feeac8b8ec0fedfff6 201 Gene3D G3DSA:1.10.760.10 14 195 2.6E-35 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 SUPERFAMILY SSF56935 44 312 1.56E-65 T 22-04-2016 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 SUPERFAMILY SSF56935 415 729 1.56E-65 T 22-04-2016 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 Gene3D G3DSA:2.170.130.10 43 169 1.2E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 Gene3D G3DSA:2.40.170.20 405 720 3.0E-30 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 Gene3D G3DSA:2.40.170.20 170 311 3.0E-30 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 Pfam PF00593 TonB dependent receptor 506 730 5.1E-8 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 PANTHER PTHR32552 395 540 2.0E-34 T 22-04-2016 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 PANTHER PTHR32552 562 731 2.0E-34 T 22-04-2016 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 PANTHER PTHR32552 4 339 2.0E-34 T 22-04-2016 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 165 9.2E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 PANTHER PTHR32552:SF31 395 540 2.0E-34 T 22-04-2016 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 PANTHER PTHR32552:SF31 562 731 2.0E-34 T 22-04-2016 R615_RS13815 d39ff9aee07447d7caa3a0791423252a 770 PANTHER PTHR32552:SF31 4 339 2.0E-34 T 22-04-2016 R615_RS12130 2c4dd2dd3acabe450fd0c9ec913dc6a2 643 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 12 642 2.2E-130 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 R615_RS12130 2c4dd2dd3acabe450fd0c9ec913dc6a2 643 SUPERFAMILY SSF50249 566 641 9.0E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12130 2c4dd2dd3acabe450fd0c9ec913dc6a2 643 SMART SM00357 25 82 4.5E-8 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 R615_RS12130 2c4dd2dd3acabe450fd0c9ec913dc6a2 643 SUPERFAMILY SSF50249 87 171 6.0E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12130 2c4dd2dd3acabe450fd0c9ec913dc6a2 643 Pfam PF00773 RNB domain 197 520 3.2E-81 T 22-04-2016 R615_RS12130 2c4dd2dd3acabe450fd0c9ec913dc6a2 643 Gene3D G3DSA:2.40.50.140 23 77 4.2E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12130 2c4dd2dd3acabe450fd0c9ec913dc6a2 643 PANTHER PTHR23355 24 643 2.0E-106 T 22-04-2016 R615_RS12130 2c4dd2dd3acabe450fd0c9ec913dc6a2 643 Pfam PF08206 Ribonuclease B OB domain 26 71 4.2E-8 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain R615_RS12130 2c4dd2dd3acabe450fd0c9ec913dc6a2 643 Gene3D G3DSA:2.40.50.140 566 639 1.9E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12130 2c4dd2dd3acabe450fd0c9ec913dc6a2 643 SUPERFAMILY SSF50249 158 559 6.85E-101 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12130 2c4dd2dd3acabe450fd0c9ec913dc6a2 643 SMART SM00955 197 521 2.1E-107 T 22-04-2016 R615_RS12130 2c4dd2dd3acabe450fd0c9ec913dc6a2 643 SUPERFAMILY SSF50249 9 82 1.14E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS14670 3b0db16649259b9223e5bfcad42aa15c 315 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 40 290 2.9E-77 T 22-04-2016 IPR007817 Pyoverdine biosynthesis R615_RS14670 3b0db16649259b9223e5bfcad42aa15c 315 PANTHER PTHR37285:SF2 1 315 2.0E-62 T 22-04-2016 R615_RS14670 3b0db16649259b9223e5bfcad42aa15c 315 PANTHER PTHR37285 1 315 2.0E-62 T 22-04-2016 R615_RS10155 5aadb0317a76aab7a212571347614422 493 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 6 484 2.3E-203 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 R615_RS10155 5aadb0317a76aab7a212571347614422 493 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 5 490 9.9E-228 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 R615_RS10155 5aadb0317a76aab7a212571347614422 493 PANTHER PTHR13847:SF214 5 402 1.3E-177 T 22-04-2016 R615_RS10155 5aadb0317a76aab7a212571347614422 493 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 2 490 49.334 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 R615_RS10155 5aadb0317a76aab7a212571347614422 493 PANTHER PTHR13847 5 402 1.3E-177 T 22-04-2016 R615_RS10155 5aadb0317a76aab7a212571347614422 493 Gene3D G3DSA:3.50.50.60 146 328 1.6E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10155 5aadb0317a76aab7a212571347614422 493 Gene3D G3DSA:3.50.50.60 6 72 1.6E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10155 5aadb0317a76aab7a212571347614422 493 SUPERFAMILY SSF51905 100 323 6.04E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10155 5aadb0317a76aab7a212571347614422 493 SUPERFAMILY SSF51905 3 65 6.04E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 SUPERFAMILY SSF54106 531 578 4.58E-9 T 22-04-2016 IPR018392 LysM domain R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 184 212 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 Pfam PF01464 Transglycosylase SLT domain 174 275 5.8E-22 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 PANTHER PTHR21666:SF203 117 558 1.1E-148 T 22-04-2016 R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 Gene3D G3DSA:1.10.530.10 163 322 1.1E-44 T 22-04-2016 R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 Pfam PF01476 LysM domain 396 438 6.2E-13 T 22-04-2016 IPR018392 LysM domain R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 Pfam PF01476 LysM domain 473 515 5.4E-12 T 22-04-2016 IPR018392 LysM domain R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 Pfam PF01476 LysM domain 533 575 2.3E-9 T 22-04-2016 IPR018392 LysM domain R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 Gene3D G3DSA:3.10.350.10 394 439 1.7E-16 T 22-04-2016 IPR018392 LysM domain R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 SUPERFAMILY SSF54106 394 438 1.05E-10 T 22-04-2016 IPR018392 LysM domain R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 SMART SM00257 472 516 4.1E-12 T 22-04-2016 IPR018392 LysM domain R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 SMART SM00257 395 438 5.1E-13 T 22-04-2016 IPR018392 LysM domain R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 SMART SM00257 532 577 3.8E-8 T 22-04-2016 IPR018392 LysM domain R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 PANTHER PTHR21666 117 558 1.1E-148 T 22-04-2016 R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 Gene3D G3DSA:3.10.350.10 471 516 3.9E-17 T 22-04-2016 IPR018392 LysM domain R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 Gene3D G3DSA:3.10.350.10 531 577 8.5E-16 T 22-04-2016 IPR018392 LysM domain R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 SUPERFAMILY SSF54106 471 516 4.97E-11 T 22-04-2016 IPR018392 LysM domain R615_RS08205 a8d462bb48373bc7ff97ec50a7e26471 582 SUPERFAMILY SSF53955 163 315 1.41E-40 T 22-04-2016 IPR023346 Lysozyme-like domain R615_RS13570 f994cad0708b0fa0dfd782fb3d866f1d 493 SUPERFAMILY SSF51905 150 344 1.58E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS13570 f994cad0708b0fa0dfd782fb3d866f1d 493 PANTHER PTHR23023 3 467 5.5E-219 T 22-04-2016 R615_RS13570 f994cad0708b0fa0dfd782fb3d866f1d 493 Gene3D G3DSA:3.50.50.60 2 220 1.2E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS13570 f994cad0708b0fa0dfd782fb3d866f1d 493 Gene3D G3DSA:3.50.50.60 320 462 3.9E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS13570 f994cad0708b0fa0dfd782fb3d866f1d 493 SUPERFAMILY SSF51905 4 214 4.17E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS13570 f994cad0708b0fa0dfd782fb3d866f1d 493 PANTHER PTHR23023:SF30 3 467 5.5E-219 T 22-04-2016 R615_RS13570 f994cad0708b0fa0dfd782fb3d866f1d 493 Pfam PF00743 Flavin-binding monooxygenase-like 80 346 2.0E-14 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 R615_RS13570 f994cad0708b0fa0dfd782fb3d866f1d 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 3.3E-5 T 22-04-2016 R615_RS13570 f994cad0708b0fa0dfd782fb3d866f1d 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.3E-5 T 22-04-2016 R615_RS13570 f994cad0708b0fa0dfd782fb3d866f1d 493 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 57 2.5E-6 T 22-04-2016 R615_RS06725 b0c5e1a572bed68ac0999daad49c835a 624 Pfam PF13193 AMP-binding enzyme C-terminal domain 499 576 3.7E-10 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain R615_RS06725 b0c5e1a572bed68ac0999daad49c835a 624 Gene3D G3DSA:2.30.38.10 420 471 1.2E-5 T 22-04-2016 R615_RS06725 b0c5e1a572bed68ac0999daad49c835a 624 PANTHER PTHR24096:SF192 57 623 2.7E-209 T 22-04-2016 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 GO:0004467|GO:0006633 R615_RS06725 b0c5e1a572bed68ac0999daad49c835a 624 Gene3D G3DSA:3.40.50.980 236 382 3.1E-24 T 22-04-2016 R615_RS06725 b0c5e1a572bed68ac0999daad49c835a 624 Gene3D G3DSA:3.40.50.980 60 235 1.0E-37 T 22-04-2016 R615_RS06725 b0c5e1a572bed68ac0999daad49c835a 624 Gene3D G3DSA:3.30.300.30 491 589 3.5E-12 T 22-04-2016 R615_RS06725 b0c5e1a572bed68ac0999daad49c835a 624 PANTHER PTHR24096 57 623 2.7E-209 T 22-04-2016 R615_RS06725 b0c5e1a572bed68ac0999daad49c835a 624 SUPERFAMILY SSF56801 61 588 2.09E-102 T 22-04-2016 R615_RS06725 b0c5e1a572bed68ac0999daad49c835a 624 ProSitePatterns PS00455 Putative AMP-binding domain signature. 230 241 - T 22-04-2016 IPR020845 AMP-binding, conserved site R615_RS06725 b0c5e1a572bed68ac0999daad49c835a 624 Pfam PF00501 AMP-binding enzyme 66 490 3.4E-69 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 R615_RS14255 99dee5b69b2225260c7d3df0cab0f606 204 Pfam PF12804 MobA-like NTP transferase domain 6 159 1.3E-21 T 22-04-2016 IPR025877 MobA-like NTP transferase R615_RS14255 99dee5b69b2225260c7d3df0cab0f606 204 SUPERFAMILY SSF53448 5 160 1.08E-15 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS14255 99dee5b69b2225260c7d3df0cab0f606 204 Gene3D G3DSA:3.90.550.10 3 189 1.2E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 SUPERFAMILY SSF82714 725 810 1.26E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 SUPERFAMILY SSF82866 810 1035 7.19E-52 T 22-04-2016 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 SUPERFAMILY SSF82693 567 663 3.66E-9 T 22-04-2016 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 PANTHER PTHR32063 2 1044 0.0 T 22-04-2016 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 5.5E-17 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 5.5E-17 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.5E-17 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 5.5E-17 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.5E-17 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 5.5E-17 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 Gene3D G3DSA:3.30.70.1430 574 660 4.8E-6 T 22-04-2016 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 Pfam PF00873 AcrB/AcrD/AcrF family 6 1029 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 Gene3D G3DSA:3.30.2090.10 192 274 3.4E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 Gene3D G3DSA:3.30.2090.10 726 810 3.1E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 SUPERFAMILY SSF82714 192 274 4.05E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 Gene3D G3DSA:1.10.3850.10 816 1032 1.8E-52 T 22-04-2016 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 Gene3D G3DSA:1.10.3850.10 284 507 1.4E-45 T 22-04-2016 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 SUPERFAMILY SSF82693 153 191 3.4E-18 T 22-04-2016 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 SUPERFAMILY SSF82693 277 333 3.4E-18 T 22-04-2016 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 SUPERFAMILY SSF82866 300 506 2.35E-29 T 22-04-2016 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1040 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 SUPERFAMILY SSF82693 42 128 4.01E-19 T 22-04-2016 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 PANTHER PTHR32063:SF24 2 1044 0.0 T 22-04-2016 R615_RS08865 c847355de5b911dc7f589b031d5220f1 1044 Gene3D G3DSA:3.30.70.1430 42 142 7.6E-25 T 22-04-2016 R615_RS02630 9aab7986b2f0179425f284512126246d 267 SMART SM00100 133 249 6.1E-18 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS02630 9aab7986b2f0179425f284512126246d 267 SUPERFAMILY SSF51206 51 136 4.32E-6 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like R615_RS02630 9aab7986b2f0179425f284512126246d 267 PRINTS PR00103 cAMP-dependent protein kinase signature 154 168 1.2E-10 T 22-04-2016 R615_RS02630 9aab7986b2f0179425f284512126246d 267 PRINTS PR00103 cAMP-dependent protein kinase signature 194 203 1.2E-10 T 22-04-2016 R615_RS02630 9aab7986b2f0179425f284512126246d 267 PRINTS PR00103 cAMP-dependent protein kinase signature 169 183 1.2E-10 T 22-04-2016 R615_RS02630 9aab7986b2f0179425f284512126246d 267 PRINTS PR00103 cAMP-dependent protein kinase signature 206 217 1.2E-10 T 22-04-2016 R615_RS02630 9aab7986b2f0179425f284512126246d 267 Gene3D G3DSA:2.60.120.10 50 126 1.7E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS02630 9aab7986b2f0179425f284512126246d 267 Pfam PF00027 Cyclic nucleotide-binding domain 152 232 3.5E-19 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS02630 9aab7986b2f0179425f284512126246d 267 SUPERFAMILY SSF51206 130 259 4.06E-30 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like R615_RS02630 9aab7986b2f0179425f284512126246d 267 PANTHER PTHR24567 117 259 1.6E-18 T 22-04-2016 R615_RS02630 9aab7986b2f0179425f284512126246d 267 Gene3D G3DSA:2.60.120.10 127 259 1.3E-30 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS05465 d4e674f9ec9dd126b583d53244cede28 212 PANTHER PTHR31527:SF0 9 212 1.5E-54 T 22-04-2016 R615_RS05465 d4e674f9ec9dd126b583d53244cede28 212 Pfam PF09347 Domain of unknown function (DUF1989) 17 185 2.1E-62 T 22-04-2016 IPR018959 Domain of unknown function DUF1989 R615_RS05465 d4e674f9ec9dd126b583d53244cede28 212 PANTHER PTHR31527 9 212 1.5E-54 T 22-04-2016 R615_RS05465 d4e674f9ec9dd126b583d53244cede28 212 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 14 211 1.4E-99 T 22-04-2016 IPR017791 Urea carboxylase-associated protein 1 R615_RS08030 c375546cf57fe469409eb8c38a71ef05 228 Pfam PF00005 ABC transporter 28 175 2.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS08030 c375546cf57fe469409eb8c38a71ef05 228 SUPERFAMILY SSF52540 8 222 3.08E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08030 c375546cf57fe469409eb8c38a71ef05 228 PANTHER PTHR24220:SF111 9 225 1.0E-96 T 22-04-2016 R615_RS08030 c375546cf57fe469409eb8c38a71ef05 228 PANTHER PTHR24220 9 225 1.0E-96 T 22-04-2016 R615_RS08030 c375546cf57fe469409eb8c38a71ef05 228 Gene3D G3DSA:3.40.50.300 6 222 2.1E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08030 c375546cf57fe469409eb8c38a71ef05 228 SMART SM00382 36 225 1.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS15535 e4e102760d2aa9b162600fe5f5c84d4e 210 SUPERFAMILY SSF52833 47 206 8.31E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS15535 e4e102760d2aa9b162600fe5f5c84d4e 210 PANTHER PTHR12151 8 207 2.0E-49 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC R615_RS15535 e4e102760d2aa9b162600fe5f5c84d4e 210 Pfam PF02630 SCO1/SenC 54 185 3.4E-32 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC R615_RS15535 e4e102760d2aa9b162600fe5f5c84d4e 210 Gene3D G3DSA:3.40.30.10 15 207 1.3E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS15535 e4e102760d2aa9b162600fe5f5c84d4e 210 PANTHER PTHR12151:SF0 8 207 2.0E-49 T 22-04-2016 R615_RS00405 468ebfd39c8409395a7a567903321e4a 316 Gene3D G3DSA:3.90.1200.10 105 314 2.8E-52 T 22-04-2016 R615_RS00405 468ebfd39c8409395a7a567903321e4a 316 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 310 1.7E-84 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 R615_RS00405 468ebfd39c8409395a7a567903321e4a 316 Pfam PF01636 Phosphotransferase enzyme family 28 259 6.1E-29 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase R615_RS00405 468ebfd39c8409395a7a567903321e4a 316 Gene3D G3DSA:3.30.200.20 1 102 5.1E-32 T 22-04-2016 R615_RS00405 468ebfd39c8409395a7a567903321e4a 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 116.175 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 R615_RS00405 468ebfd39c8409395a7a567903321e4a 316 SUPERFAMILY SSF56112 5 288 4.23E-63 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS00405 468ebfd39c8409395a7a567903321e4a 316 PANTHER PTHR21064 9 288 9.0E-34 T 22-04-2016 R615_RS11165 1c095390bb7e2e4e33e4cc02ba263c89 78 Pfam PF09360 Iron-binding zinc finger CDGSH type 14 41 2.4E-11 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 R615_RS11165 1c095390bb7e2e4e33e4cc02ba263c89 78 Pfam PF09360 Iron-binding zinc finger CDGSH type 56 76 4.5E-6 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 R615_RS11165 1c095390bb7e2e4e33e4cc02ba263c89 78 SMART SM00704 9 46 5.2E-13 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 R615_RS11165 1c095390bb7e2e4e33e4cc02ba263c89 78 SMART SM00704 47 78 0.027 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 R615_RS11165 1c095390bb7e2e4e33e4cc02ba263c89 78 PANTHER PTHR13680 5 76 9.1E-28 T 22-04-2016 R615_RS14495 b20bc078d247a5555cabed2efb59f0cd 158 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 152 3.9E-54 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14495 b20bc078d247a5555cabed2efb59f0cd 158 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 17 153 1.0E-55 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14495 b20bc078d247a5555cabed2efb59f0cd 158 Gene3D G3DSA:3.40.50.960 5 157 2.3E-64 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14495 b20bc078d247a5555cabed2efb59f0cd 158 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 156 30.912 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14495 b20bc078d247a5555cabed2efb59f0cd 158 PANTHER PTHR21058 4 158 3.0E-74 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14495 b20bc078d247a5555cabed2efb59f0cd 158 SUPERFAMILY SSF52121 6 156 1.31E-60 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS06825 9105cf4b6a820fabc9f1942592528b34 271 PANTHER PTHR26312 155 248 8.5E-22 T 22-04-2016 R615_RS06825 9105cf4b6a820fabc9f1942592528b34 271 PANTHER PTHR26312:SF74 155 248 8.5E-22 T 22-04-2016 R615_RS06825 9105cf4b6a820fabc9f1942592528b34 271 Pfam PF13174 Tetratricopeptide repeat 219 249 0.012 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS06825 9105cf4b6a820fabc9f1942592528b34 271 Gene3D G3DSA:1.25.40.10 147 261 1.2E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS06825 9105cf4b6a820fabc9f1942592528b34 271 Pfam PF16331 TolA binding protein trimerisation 62 114 1.1E-13 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 R615_RS06825 9105cf4b6a820fabc9f1942592528b34 271 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 145 252 2.6E-31 T 22-04-2016 IPR014162 Tol-Pal system, YbgF R615_RS06825 9105cf4b6a820fabc9f1942592528b34 271 Pfam PF13432 Tetratricopeptide repeat 148 201 1.9E-7 T 22-04-2016 R615_RS06825 9105cf4b6a820fabc9f1942592528b34 271 SUPERFAMILY SSF48452 148 262 6.51E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS16045 c2b65cac790dc5e0cdd4625d652a797d 177 PANTHER PTHR10815 9 169 6.3E-68 T 22-04-2016 R615_RS16045 c2b65cac790dc5e0cdd4625d652a797d 177 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 90 169 3.3E-36 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 R615_RS16045 c2b65cac790dc5e0cdd4625d652a797d 177 PANTHER PTHR10815:SF9 9 169 6.3E-68 T 22-04-2016 R615_RS16045 c2b65cac790dc5e0cdd4625d652a797d 177 SUPERFAMILY SSF53155 9 82 1.77E-12 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 R615_RS16045 c2b65cac790dc5e0cdd4625d652a797d 177 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 91 170 3.9E-31 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 R615_RS16045 c2b65cac790dc5e0cdd4625d652a797d 177 Gene3D G3DSA:1.10.10.10 89 173 1.3E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS16045 c2b65cac790dc5e0cdd4625d652a797d 177 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 140 146 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 R615_RS16045 c2b65cac790dc5e0cdd4625d652a797d 177 Gene3D G3DSA:3.30.160.70 8 83 3.3E-18 T 22-04-2016 R615_RS16045 c2b65cac790dc5e0cdd4625d652a797d 177 SUPERFAMILY SSF46767 89 170 2.35E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 R615_RS12875 38e1bacf8f8179e7e50c833dc34fe1a3 199 Gene3D G3DSA:3.40.630.30 5 197 1.2E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS12875 38e1bacf8f8179e7e50c833dc34fe1a3 199 PANTHER PTHR21471:SF63 5 199 1.1E-16 T 22-04-2016 R615_RS12875 38e1bacf8f8179e7e50c833dc34fe1a3 199 PANTHER PTHR21471 5 199 1.1E-16 T 22-04-2016 R615_RS12875 38e1bacf8f8179e7e50c833dc34fe1a3 199 SUPERFAMILY SSF55729 112 193 1.96E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS12875 38e1bacf8f8179e7e50c833dc34fe1a3 199 SUPERFAMILY SSF55729 6 81 1.96E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS12875 38e1bacf8f8179e7e50c833dc34fe1a3 199 Pfam PF00583 Acetyltransferase (GNAT) family 115 175 1.9E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS04640 d3b44019c7904f5dca3535d4286d5dc1 261 PANTHER PTHR30435:SF19 1 261 4.8E-126 T 22-04-2016 R615_RS04640 d3b44019c7904f5dca3535d4286d5dc1 261 PANTHER PTHR30435 1 261 4.8E-126 T 22-04-2016 R615_RS04640 d3b44019c7904f5dca3535d4286d5dc1 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 5.5E-25 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain R615_RS04640 d3b44019c7904f5dca3535d4286d5dc1 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 243 1.1E-32 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G R615_RS04640 d3b44019c7904f5dca3535d4286d5dc1 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 1.2E-46 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G R615_RS04640 d3b44019c7904f5dca3535d4286d5dc1 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site R615_RS04640 d3b44019c7904f5dca3535d4286d5dc1 261 SUPERFAMILY SSF117143 92 222 7.98E-37 T 22-04-2016 R615_RS04640 d3b44019c7904f5dca3535d4286d5dc1 261 Pfam PF00460 Flagella basal body rod protein 5 35 5.7E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 R615_RS04640 d3b44019c7904f5dca3535d4286d5dc1 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 6.4E-114 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 R615_RS07130 90be2881bd695836cb60d48f49098de7 204 PANTHER PTHR30335:SF1 2 204 1.4E-136 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 R615_RS07130 90be2881bd695836cb60d48f49098de7 204 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 202 2.0E-105 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 R615_RS07130 90be2881bd695836cb60d48f49098de7 204 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 204 29.478 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 R615_RS07130 90be2881bd695836cb60d48f49098de7 204 PIRSF PIRSF006102 1 204 1.8E-60 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 R615_RS07130 90be2881bd695836cb60d48f49098de7 204 PANTHER PTHR30335 2 204 1.4E-136 T 22-04-2016 R615_RS07130 90be2881bd695836cb60d48f49098de7 204 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 202 5.8E-58 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 PANTHER PTHR11766:SF0 2 431 6.8E-187 T 22-04-2016 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 SUPERFAMILY SSF52374 4 327 1.93E-97 T 22-04-2016 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 PANTHER PTHR11766 2 431 6.8E-187 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 Gene3D G3DSA:1.10.240.10 237 320 1.0E-39 T 22-04-2016 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 SUPERFAMILY SSF55174 325 430 1.84E-8 T 22-04-2016 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 430 5.0E-113 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 2.8E-30 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 2.8E-30 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 2.8E-30 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 2.8E-30 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 3 431 42.953 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 Gene3D G3DSA:3.10.290.10 321 431 7.1E-15 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 Gene3D G3DSA:3.40.50.620 4 236 2.2E-96 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS01455 35b2fcb15de0bacb2ea44fbf97aad65b 433 Pfam PF00579 tRNA synthetases class I (W and Y) 34 327 1.2E-83 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS09380 ff42aed3647f2b08d9ac68fbf2486636 146 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 1.0E-7 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein R615_RS09380 ff42aed3647f2b08d9ac68fbf2486636 146 PANTHER PTHR37421:SF1 1 145 1.9E-57 T 22-04-2016 R615_RS09380 ff42aed3647f2b08d9ac68fbf2486636 146 PANTHER PTHR37421 1 145 1.9E-57 T 22-04-2016 R615_RS09380 ff42aed3647f2b08d9ac68fbf2486636 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 146 37.594 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 R615_RS09380 ff42aed3647f2b08d9ac68fbf2486636 146 PIRSF PIRSF006173 1 146 9.4E-61 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 R615_RS12350 3e9cdad3f89a96d477602e652b1b3345 596 SUPERFAMILY SSF56645 39 279 1.96E-48 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 R615_RS12350 3e9cdad3f89a96d477602e652b1b3345 596 Gene3D G3DSA:1.10.540.10 38 156 5.3E-14 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS12350 3e9cdad3f89a96d477602e652b1b3345 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 268 1.3E-16 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 R615_RS12350 3e9cdad3f89a96d477602e652b1b3345 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 463 592 2.8E-28 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain R615_RS12350 3e9cdad3f89a96d477602e652b1b3345 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 447 4.5E-18 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS12350 3e9cdad3f89a96d477602e652b1b3345 596 PANTHER PTHR10909:SF269 1 472 7.0E-195 T 22-04-2016 R615_RS12350 3e9cdad3f89a96d477602e652b1b3345 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 42 155 5.5E-11 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS12350 3e9cdad3f89a96d477602e652b1b3345 596 Gene3D G3DSA:2.40.110.10 159 270 2.9E-22 T 22-04-2016 R615_RS12350 3e9cdad3f89a96d477602e652b1b3345 596 SUPERFAMILY SSF47203 288 455 9.67E-37 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS12350 3e9cdad3f89a96d477602e652b1b3345 596 Gene3D G3DSA:1.20.140.10 272 456 1.9E-43 T 22-04-2016 R615_RS12350 3e9cdad3f89a96d477602e652b1b3345 596 PANTHER PTHR10909 1 472 7.0E-195 T 22-04-2016 R615_RS12350 3e9cdad3f89a96d477602e652b1b3345 596 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 7 33 8.2E-9 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria R615_RS16230 feca019681933d4cd4112ec1b8ab969d 381 Pfam PF04055 Radical SAM superfamily 10 175 3.0E-22 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 R615_RS16230 feca019681933d4cd4112ec1b8ab969d 381 Gene3D G3DSA:3.80.30.20 6 238 1.2E-34 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe R615_RS16230 feca019681933d4cd4112ec1b8ab969d 381 SUPERFAMILY SSF102114 4 377 7.85E-106 T 22-04-2016 R615_RS16230 feca019681933d4cd4112ec1b8ab969d 381 PANTHER PTHR13932 4 381 2.3E-179 T 22-04-2016 R615_RS16230 feca019681933d4cd4112ec1b8ab969d 381 PANTHER PTHR13932:SF7 4 381 2.3E-179 T 22-04-2016 R615_RS16230 feca019681933d4cd4112ec1b8ab969d 381 SMART SM00729 5 221 8.4E-56 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 R615_RS16230 feca019681933d4cd4112ec1b8ab969d 381 Pfam PF06969 HemN C-terminal domain 307 365 8.9E-12 T 22-04-2016 IPR010723 HemN, C-terminal R615_RS16230 feca019681933d4cd4112ec1b8ab969d 381 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 6 365 1.3E-119 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 SUPERFAMILY SSF51735 1080 1277 2.23E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 SUPERFAMILY SSF51735 942 1044 2.23E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 66 1598 0.0 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 PIRSF PIRSF036761 3 1605 0.0 T 22-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 PANTHER PTHR11606:SF1 1119 1364 0.0 T 22-04-2016 R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 PANTHER PTHR11606:SF1 208 558 0.0 T 22-04-2016 R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 PANTHER PTHR11606:SF1 3 140 0.0 T 22-04-2016 R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 PANTHER PTHR11606:SF1 667 1094 0.0 T 22-04-2016 R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 Gene3D G3DSA:3.40.50.720 1085 1197 1.3E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 Gene3D G3DSA:3.40.50.720 939 1050 1.3E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 PANTHER PTHR11606 1119 1364 0.0 T 22-04-2016 R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 PANTHER PTHR11606 208 558 0.0 T 22-04-2016 R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 PANTHER PTHR11606 3 140 0.0 T 22-04-2016 R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 PANTHER PTHR11606 667 1094 0.0 T 22-04-2016 R615_RS11220 fa8556106cb752b70d4e222d33726edc 1611 SUPERFAMILY SSF53223 751 953 1.73E-25 T 22-04-2016 R615_RS05755 57e9805c16174c69bb745b23942c7bb9 666 PANTHER PTHR32089 307 665 8.5E-89 T 22-04-2016 R615_RS05755 57e9805c16174c69bb745b23942c7bb9 666 PANTHER PTHR32089 268 288 8.5E-89 T 22-04-2016 R615_RS05755 57e9805c16174c69bb745b23942c7bb9 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 459 661 2.1E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS05755 57e9805c16174c69bb745b23942c7bb9 666 SMART SM00283 401 662 5.3E-64 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS05755 57e9805c16174c69bb745b23942c7bb9 666 SMART SM00304 333 386 4.4E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS05755 57e9805c16174c69bb745b23942c7bb9 666 SUPERFAMILY SSF58104 355 663 5.49E-68 T 22-04-2016 R615_RS05755 57e9805c16174c69bb745b23942c7bb9 666 Pfam PF08376 Nitrate and nitrite sensing 57 295 9.3E-48 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein R615_RS05755 57e9805c16174c69bb745b23942c7bb9 666 Gene3D G3DSA:1.10.287.950 416 632 1.7E-52 T 22-04-2016 R615_RS15820 8e385764b86bab12b4fad5f204cb44f7 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 19.425 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15820 8e385764b86bab12b4fad5f204cb44f7 104 Pfam PF00467 KOW motif 6 35 1.3E-5 T 22-04-2016 IPR005824 KOW R615_RS15820 8e385764b86bab12b4fad5f204cb44f7 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 102 1.8E-35 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15820 8e385764b86bab12b4fad5f204cb44f7 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15820 8e385764b86bab12b4fad5f204cb44f7 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 2.7E-24 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15820 8e385764b86bab12b4fad5f204cb44f7 104 PANTHER PTHR12903 2 99 1.7E-39 T 22-04-2016 R615_RS15820 8e385764b86bab12b4fad5f204cb44f7 104 SUPERFAMILY SSF50104 3 100 6.39E-32 T 22-04-2016 IPR008991 Translation protein SH3-like domain R615_RS15820 8e385764b86bab12b4fad5f204cb44f7 104 SMART SM00739 3 30 1.2E-4 T 22-04-2016 IPR005824 KOW R615_RS15820 8e385764b86bab12b4fad5f204cb44f7 104 Gene3D G3DSA:2.30.30.30 2 91 8.7E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 R615_RS03465 b25ce3d03eae5dc460dad86bff0cc4b2 587 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 570 587 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site R615_RS03465 b25ce3d03eae5dc460dad86bff0cc4b2 587 SUPERFAMILY SSF56935 37 587 3.15E-80 T 22-04-2016 R615_RS03465 b25ce3d03eae5dc460dad86bff0cc4b2 587 Pfam PF00593 TonB dependent receptor 384 582 2.4E-8 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS03465 b25ce3d03eae5dc460dad86bff0cc4b2 587 PANTHER PTHR30069:SF2 517 568 4.8E-27 T 22-04-2016 R615_RS03465 b25ce3d03eae5dc460dad86bff0cc4b2 587 PANTHER PTHR30069:SF2 3 458 4.8E-27 T 22-04-2016 R615_RS03465 b25ce3d03eae5dc460dad86bff0cc4b2 587 Gene3D G3DSA:2.40.170.20 146 587 1.0E-59 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS03465 b25ce3d03eae5dc460dad86bff0cc4b2 587 PANTHER PTHR30069 517 568 4.8E-27 T 22-04-2016 R615_RS03465 b25ce3d03eae5dc460dad86bff0cc4b2 587 PANTHER PTHR30069 3 458 4.8E-27 T 22-04-2016 R615_RS03465 b25ce3d03eae5dc460dad86bff0cc4b2 587 Pfam PF07715 TonB-dependent Receptor Plug Domain 37 139 1.0E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS03465 b25ce3d03eae5dc460dad86bff0cc4b2 587 Gene3D G3DSA:2.170.130.10 37 145 1.7E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 Gene3D G3DSA:3.40.50.880 1037 1283 8.5E-12 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 SMART SM01211 1034 1288 2.3E-152 T 22-04-2016 R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 SUPERFAMILY SSF109736 152 217 9.29E-21 T 22-04-2016 R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 SUPERFAMILY SSF55326 613 809 1.91E-64 T 22-04-2016 R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1289 20.976 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 Pfam PF02769 AIR synthase related protein, C-terminal domain 425 582 6.0E-26 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 Pfam PF02769 AIR synthase related protein, C-terminal domain 831 961 9.9E-14 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 SUPERFAMILY SSF55326 218 421 4.53E-64 T 22-04-2016 R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 PANTHER PTHR10099 1 1291 0.0 T 22-04-2016 R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 Gene3D G3DSA:3.30.1330.10 208 415 1.3E-38 T 22-04-2016 IPR016188 PurM-like, N-terminal domain R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 Gene3D G3DSA:3.30.1330.10 638 803 6.2E-13 T 22-04-2016 IPR016188 PurM-like, N-terminal domain R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 SUPERFAMILY SSF52317 1034 1288 1.25E-94 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1287 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 SUPERFAMILY SSF56042 424 648 8.37E-52 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 PANTHER PTHR10099:SF5 1 1291 0.0 T 22-04-2016 R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 SUPERFAMILY SSF82697 1 149 4.08E-47 T 22-04-2016 R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 SUPERFAMILY SSF56042 820 1028 9.12E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS04305 ed3333405d66a58e3f652e28ba52ed3d 1291 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1034 1288 4.2E-108 T 22-04-2016 R615_RS08070 ace63217c401b9c1a8d921c614708255 166 SMART SM00226 1 160 1.2E-51 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily R615_RS08070 ace63217c401b9c1a8d921c614708255 166 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 157 8.2E-40 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily R615_RS08070 ace63217c401b9c1a8d921c614708255 166 Gene3D G3DSA:3.40.50.270 2 164 2.3E-51 T 22-04-2016 R615_RS08070 ace63217c401b9c1a8d921c614708255 166 PANTHER PTHR11717:SF7 1 98 9.3E-58 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 R615_RS08070 ace63217c401b9c1a8d921c614708255 166 PANTHER PTHR11717:SF7 118 164 9.3E-58 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 R615_RS08070 ace63217c401b9c1a8d921c614708255 166 PANTHER PTHR11717 1 98 9.3E-58 T 22-04-2016 R615_RS08070 ace63217c401b9c1a8d921c614708255 166 PANTHER PTHR11717 118 164 9.3E-58 T 22-04-2016 R615_RS08070 ace63217c401b9c1a8d921c614708255 166 SUPERFAMILY SSF52788 2 161 3.4E-46 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily R615_RS08070 ace63217c401b9c1a8d921c614708255 166 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 3.9E-18 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 R615_RS08070 ace63217c401b9c1a8d921c614708255 166 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 3.9E-18 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 R615_RS08070 ace63217c401b9c1a8d921c614708255 166 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 3.9E-18 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 R615_RS04510 feb293853d195d069015c15752290737 296 PANTHER PTHR17630:SF50 6 144 5.0E-42 T 22-04-2016 R615_RS04510 feb293853d195d069015c15752290737 296 PANTHER PTHR17630:SF50 228 291 5.0E-42 T 22-04-2016 R615_RS04510 feb293853d195d069015c15752290737 296 PANTHER PTHR17630 6 144 5.0E-42 T 22-04-2016 R615_RS04510 feb293853d195d069015c15752290737 296 PANTHER PTHR17630 228 291 5.0E-42 T 22-04-2016 R615_RS04510 feb293853d195d069015c15752290737 296 Gene3D G3DSA:3.40.50.1820 2 138 2.8E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS04510 feb293853d195d069015c15752290737 296 Gene3D G3DSA:3.40.50.1820 222 291 2.8E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS04510 feb293853d195d069015c15752290737 296 Pfam PF12146 Serine aminopeptidase, S33 26 258 3.7E-11 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 R615_RS04510 feb293853d195d069015c15752290737 296 SUPERFAMILY SSF53474 189 293 7.24E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS04510 feb293853d195d069015c15752290737 296 SUPERFAMILY SSF53474 5 143 7.24E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS07415 d82a3f46c07c50680c8988fb9edeef4c 268 PANTHER PTHR21198 1 260 4.5E-75 T 22-04-2016 R615_RS07415 d82a3f46c07c50680c8988fb9edeef4c 268 Hamap MF_00258 Glutamate racemase [murI]. 3 268 29.467 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS07415 d82a3f46c07c50680c8988fb9edeef4c 268 Gene3D G3DSA:3.40.50.1860 2 165 2.1E-41 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS07415 d82a3f46c07c50680c8988fb9edeef4c 268 SUPERFAMILY SSF53681 5 104 9.81E-29 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS07415 d82a3f46c07c50680c8988fb9edeef4c 268 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 227 4.4E-56 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS07415 d82a3f46c07c50680c8988fb9edeef4c 268 SUPERFAMILY SSF53681 109 242 1.02E-27 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS07415 d82a3f46c07c50680c8988fb9edeef4c 268 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS07415 d82a3f46c07c50680c8988fb9edeef4c 268 PANTHER PTHR21198:SF2 1 260 4.5E-75 T 22-04-2016 R615_RS07415 d82a3f46c07c50680c8988fb9edeef4c 268 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 213 9.1E-21 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS07415 d82a3f46c07c50680c8988fb9edeef4c 268 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS04070 807a0d35be80c1106ef91d780e28a766 588 Gene3D G3DSA:2.40.50.100 518 587 3.4E-26 T 22-04-2016 R615_RS04070 807a0d35be80c1106ef91d780e28a766 588 PANTHER PTHR18866 10 584 6.8E-212 T 22-04-2016 R615_RS04070 807a0d35be80c1106ef91d780e28a766 588 PANTHER PTHR18866:SF109 10 584 6.8E-212 T 22-04-2016 R615_RS04070 807a0d35be80c1106ef91d780e28a766 588 SUPERFAMILY SSF89000 300 463 1.29E-49 T 22-04-2016 R615_RS04070 807a0d35be80c1106ef91d780e28a766 588 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 584 3.7E-264 T 22-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 R615_RS04070 807a0d35be80c1106ef91d780e28a766 588 Gene3D G3DSA:3.20.20.70 4 285 8.2E-115 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS04070 807a0d35be80c1106ef91d780e28a766 588 Pfam PF02436 Conserved carboxylase domain 295 482 6.8E-56 T 22-04-2016 IPR003379 Carboxylase, conserved domain R615_RS04070 807a0d35be80c1106ef91d780e28a766 588 Pfam PF00364 Biotin-requiring enzyme 523 587 1.3E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment R615_RS04070 807a0d35be80c1106ef91d780e28a766 588 SUPERFAMILY SSF51230 515 587 8.77E-22 T 22-04-2016 IPR011053 Single hybrid motif R615_RS04070 807a0d35be80c1106ef91d780e28a766 588 Pfam PF00682 HMGL-like 10 273 8.5E-59 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 R615_RS04070 807a0d35be80c1106ef91d780e28a766 588 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 544 561 - T 22-04-2016 IPR001882 Biotin-binding site R615_RS04070 807a0d35be80c1106ef91d780e28a766 588 SUPERFAMILY SSF51569 5 301 2.56E-88 T 22-04-2016 R615_RS09245 7110b931dcfdbebcb301b33cffab3cc3 324 Pfam PF03466 LysR substrate binding domain 89 276 7.3E-38 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS09245 7110b931dcfdbebcb301b33cffab3cc3 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 9.8E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS09245 7110b931dcfdbebcb301b33cffab3cc3 324 Gene3D G3DSA:1.10.10.10 1 82 6.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS09245 7110b931dcfdbebcb301b33cffab3cc3 324 Gene3D G3DSA:3.40.190.10 184 260 1.3E-27 T 22-04-2016 R615_RS09245 7110b931dcfdbebcb301b33cffab3cc3 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS09245 7110b931dcfdbebcb301b33cffab3cc3 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS09245 7110b931dcfdbebcb301b33cffab3cc3 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS09245 7110b931dcfdbebcb301b33cffab3cc3 324 SUPERFAMILY SSF53850 90 320 2.17E-41 T 22-04-2016 R615_RS09245 7110b931dcfdbebcb301b33cffab3cc3 324 PANTHER PTHR30126 1 309 5.0E-200 T 22-04-2016 R615_RS09245 7110b931dcfdbebcb301b33cffab3cc3 324 SUPERFAMILY SSF46785 1 89 2.57E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS09245 7110b931dcfdbebcb301b33cffab3cc3 324 Gene3D G3DSA:3.40.190.10 90 183 2.2E-20 T 22-04-2016 R615_RS09245 7110b931dcfdbebcb301b33cffab3cc3 324 PANTHER PTHR30126:SF6 1 309 5.0E-200 T 22-04-2016 R615_RS11105 00e0e136d08ccd6ab4d65063888e2bac 156 PANTHER PTHR30295:SF6 1 154 1.8E-60 T 22-04-2016 R615_RS11105 00e0e136d08ccd6ab4d65063888e2bac 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 8.3E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 R615_RS11105 00e0e136d08ccd6ab4d65063888e2bac 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 8.3E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 R615_RS11105 00e0e136d08ccd6ab4d65063888e2bac 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 8.3E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 R615_RS11105 00e0e136d08ccd6ab4d65063888e2bac 156 Gene3D G3DSA:1.20.1260.10 1 154 9.8E-62 T 22-04-2016 IPR012347 Ferritin-related R615_RS11105 00e0e136d08ccd6ab4d65063888e2bac 156 SUPERFAMILY SSF47240 5 154 4.87E-45 T 22-04-2016 IPR009078 Ferritin-like superfamily R615_RS11105 00e0e136d08ccd6ab4d65063888e2bac 156 Pfam PF00210 Ferritin-like domain 18 153 2.9E-28 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 R615_RS11105 00e0e136d08ccd6ab4d65063888e2bac 156 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 R615_RS11105 00e0e136d08ccd6ab4d65063888e2bac 156 PANTHER PTHR30295 1 154 1.8E-60 T 22-04-2016 R615_RS11105 00e0e136d08ccd6ab4d65063888e2bac 156 PIRSF PIRSF005900 1 156 2.2E-49 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 R615_RS11105 00e0e136d08ccd6ab4d65063888e2bac 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 Pfam PF00672 HAMP domain 155 222 7.7E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 SUPERFAMILY SSF55874 282 447 1.44E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 446 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 SUPERFAMILY SSF47384 210 293 5.1E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 Gene3D G3DSA:3.30.565.10 281 450 3.6E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 PANTHER PTHR24423 167 446 5.6E-104 T 22-04-2016 R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 293 1.2E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 446 1.1E-132 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 PANTHER PTHR24423:SF354 167 446 5.6E-104 T 22-04-2016 R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 SMART SM00388 227 293 4.7E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 SMART SM00387 337 449 2.6E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 447 8.2E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS08780 3b4d8c4d227a4a6548dd12f25f519eb3 452 Gene3D G3DSA:1.10.287.130 217 280 8.8E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03720 ffcd5242b6283fba4f91162eeae45f0e 476 Gene3D G3DSA:3.40.605.10 5 262 7.4E-79 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 R615_RS03720 ffcd5242b6283fba4f91162eeae45f0e 476 PANTHER PTHR11699 1 473 2.7E-230 T 22-04-2016 R615_RS03720 ffcd5242b6283fba4f91162eeae45f0e 476 PANTHER PTHR11699:SF108 1 473 2.7E-230 T 22-04-2016 R615_RS03720 ffcd5242b6283fba4f91162eeae45f0e 476 SUPERFAMILY SSF53720 2 474 9.56E-141 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 R615_RS03720 ffcd5242b6283fba4f91162eeae45f0e 476 Pfam PF00171 Aldehyde dehydrogenase family 19 468 2.1E-142 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 R615_RS03720 ffcd5242b6283fba4f91162eeae45f0e 476 Gene3D G3DSA:3.40.309.10 263 446 4.0E-58 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 R615_RS03720 ffcd5242b6283fba4f91162eeae45f0e 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 R615_RS09105 854d9118b332eee2ae1ea97828c5d147 339 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 331 1.3E-74 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 R615_RS09105 854d9118b332eee2ae1ea97828c5d147 339 Gene3D G3DSA:3.40.718.10 1 330 4.7E-93 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 R615_RS09105 854d9118b332eee2ae1ea97828c5d147 339 PANTHER PTHR30100 1 338 2.7E-88 T 22-04-2016 R615_RS09105 854d9118b332eee2ae1ea97828c5d147 339 PANTHER PTHR30100:SF1 1 338 2.7E-88 T 22-04-2016 R615_RS09105 854d9118b332eee2ae1ea97828c5d147 339 SUPERFAMILY SSF53659 1 330 4.07E-73 T 22-04-2016 R615_RS09105 854d9118b332eee2ae1ea97828c5d147 339 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 339 93.51 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 R615_RS09105 854d9118b332eee2ae1ea97828c5d147 339 PIRSF PIRSF002465 1 336 2.5E-90 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 R615_RS09105 854d9118b332eee2ae1ea97828c5d147 339 Pfam PF02504 Fatty acid synthesis protein 3 310 6.5E-71 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 R615_RS07740 6990f058b384f17dbd583f47d7698754 278 Pfam PF01738 Dienelactone hydrolase family 126 219 6.6E-9 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 R615_RS07740 6990f058b384f17dbd583f47d7698754 278 Gene3D G3DSA:3.40.50.1820 38 266 3.6E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS07740 6990f058b384f17dbd583f47d7698754 278 SUPERFAMILY SSF53474 34 255 1.04E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 SUPERFAMILY SSF88697 5 196 1.07E-46 T 22-04-2016 IPR015947 PUA-like domain R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 SUPERFAMILY SSF52540 307 581 2.12E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 Gene3D G3DSA:3.40.50.300 306 494 8.7E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 PIRSF PIRSF001174 1 770 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 PANTHER PTHR10046:SF43 3 771 0.0 T 22-04-2016 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 347 483 1.1E-18 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 TIGRFAM TIGR00763 lon: endopeptidase La 7 766 5.5E-299 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 PANTHER PTHR10046 3 771 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 565 767 2.7E-95 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 5 196 1.9E-39 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 Gene3D G3DSA:1.10.8.60 495 579 1.1E-29 T 22-04-2016 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 Gene3D G3DSA:3.30.230.10 587 766 1.9E-75 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 721 739 3.0E-56 T 22-04-2016 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 698 717 3.0E-56 T 22-04-2016 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 668 687 3.0E-56 T 22-04-2016 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 590 606 3.0E-56 T 22-04-2016 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 351 370 3.0E-56 T 22-04-2016 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 SMART SM00382 343 489 5.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 Hamap MF_01973 Lon protease [lon]. 6 767 69.763 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 SUPERFAMILY SSF54211 590 765 1.18E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS08175 b40eb3d8d26620b6fa76cd387b2061ae 796 SMART SM00464 5 197 4.9E-69 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 R615_RS13005 19c0ecbd2560cb8c13a2e264d39e2c76 375 Gene3D G3DSA:1.20.1250.20 181 365 1.3E-9 T 22-04-2016 R615_RS13005 19c0ecbd2560cb8c13a2e264d39e2c76 375 ProSitePatterns PS00216 Sugar transport proteins signature 1. 38 54 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 R615_RS13005 19c0ecbd2560cb8c13a2e264d39e2c76 375 SUPERFAMILY SSF103473 1 370 1.31E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS13005 19c0ecbd2560cb8c13a2e264d39e2c76 375 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 1 360 1.8E-75 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 R615_RS13005 19c0ecbd2560cb8c13a2e264d39e2c76 375 Pfam PF07690 Major Facilitator Superfamily 1 329 8.0E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 R615_RS13005 19c0ecbd2560cb8c13a2e264d39e2c76 375 PANTHER PTHR23502 1 371 2.0E-90 T 22-04-2016 R615_RS13005 19c0ecbd2560cb8c13a2e264d39e2c76 375 Gene3D G3DSA:1.20.1250.20 4 171 4.1E-27 T 22-04-2016 R615_RS13005 19c0ecbd2560cb8c13a2e264d39e2c76 375 PANTHER PTHR23502:SF39 1 371 2.0E-90 T 22-04-2016 R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1158 0.0 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 PIRSF PIRSF005719 1 1166 1.7E-266 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 PANTHER PTHR18937:SF261 1 1166 0.0 T 22-04-2016 R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 SUPERFAMILY SSF75553 485 666 5.75E-11 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 PANTHER PTHR18937 1 1166 0.0 T 22-04-2016 R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 Gene3D G3DSA:3.40.50.300 1008 1161 4.3E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 Gene3D G3DSA:3.40.50.300 1 166 4.3E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 SUPERFAMILY SSF52540 1057 1143 1.31E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 SUPERFAMILY SSF52540 1 217 1.31E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1151 9.3E-68 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1160 22.775 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 Pfam PF06470 SMC proteins Flexible Hinge Domain 525 618 1.1E-7 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 R615_RS11290 f4bfe18ba2ee4c5cccee7697d2fac4c7 1167 SMART SM00968 521 619 1.5E-4 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 R615_RS03560 4ed19d58f28ee376a33b0a6e3b5f33a3 320 PANTHER PTHR11351 15 307 2.2E-109 T 22-04-2016 R615_RS03560 4ed19d58f28ee376a33b0a6e3b5f33a3 320 PRINTS PR00075 Fatty acid desaturase family 1 signature 256 270 6.7E-15 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 R615_RS03560 4ed19d58f28ee376a33b0a6e3b5f33a3 320 PRINTS PR00075 Fatty acid desaturase family 1 signature 213 234 6.7E-15 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 R615_RS03560 4ed19d58f28ee376a33b0a6e3b5f33a3 320 PRINTS PR00075 Fatty acid desaturase family 1 signature 117 146 6.7E-15 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 R615_RS03560 4ed19d58f28ee376a33b0a6e3b5f33a3 320 PRINTS PR00075 Fatty acid desaturase family 1 signature 80 100 6.7E-15 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 R615_RS03560 4ed19d58f28ee376a33b0a6e3b5f33a3 320 PANTHER PTHR11351:SF34 15 307 2.2E-109 T 22-04-2016 R615_RS03560 4ed19d58f28ee376a33b0a6e3b5f33a3 320 Pfam PF00487 Fatty acid desaturase 60 280 8.2E-20 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 R615_RS00340 b7825a06758e97cf181d886ec60a38b4 607 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 607 2.0E-257 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 R615_RS00340 b7825a06758e97cf181d886ec60a38b4 607 Gene3D G3DSA:3.40.50.10490 248 443 1.0E-65 T 22-04-2016 R615_RS00340 b7825a06758e97cf181d886ec60a38b4 607 Pfam PF13522 Glutamine amidotransferase domain 56 191 1.2E-20 T 22-04-2016 R615_RS00340 b7825a06758e97cf181d886ec60a38b4 607 Gene3D G3DSA:3.40.50.10490 444 607 4.5E-65 T 22-04-2016 R615_RS00340 b7825a06758e97cf181d886ec60a38b4 607 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 607 41.043 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 R615_RS00340 b7825a06758e97cf181d886ec60a38b4 607 PANTHER PTHR10937 1 607 0.0 T 22-04-2016 R615_RS00340 b7825a06758e97cf181d886ec60a38b4 607 SUPERFAMILY SSF56235 2 236 2.74E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal R615_RS00340 b7825a06758e97cf181d886ec60a38b4 607 SUPERFAMILY SSF53697 248 607 1.86E-110 T 22-04-2016 R615_RS00340 b7825a06758e97cf181d886ec60a38b4 607 Gene3D G3DSA:3.60.20.10 2 240 1.2E-76 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal R615_RS00340 b7825a06758e97cf181d886ec60a38b4 607 Pfam PF01380 SIS domain 460 589 4.1E-24 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 R615_RS00340 b7825a06758e97cf181d886ec60a38b4 607 Pfam PF01380 SIS domain 288 416 1.6E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 R615_RS00340 b7825a06758e97cf181d886ec60a38b4 607 PANTHER PTHR10937:SF0 1 607 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 Gene3D G3DSA:2.30.42.10 116 192 1.3E-27 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 SUPERFAMILY SSF50156 102 193 9.77E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 SMART SM00245 183 373 1.6E-71 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 SUPERFAMILY SSF52096 39 128 1.04E-84 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 SUPERFAMILY SSF52096 202 382 1.04E-84 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 Pfam PF03572 Peptidase family S41 208 371 8.5E-58 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 Gene3D G3DSA:3.90.226.10 193 375 1.5E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 Gene3D G3DSA:3.90.226.10 420 439 1.5E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 63 383 8.9E-108 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 Pfam PF13180 PDZ domain 110 189 1.0E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 SMART SM00228 110 181 5.3E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 PANTHER PTHR32060 64 385 1.0E-117 T 22-04-2016 R615_RS02670 79c3b44c2d6f8304000480ef4c32c16c 454 Gene3D G3DSA:3.30.750.44 59 115 1.2E-8 T 22-04-2016 R615_RS12435 d0662ea400c199b080e8914bef70e1e3 815 SMART SM00563 303 430 2.1E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS12435 d0662ea400c199b080e8914bef70e1e3 815 PANTHER PTHR12563 148 786 3.0E-250 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 R615_RS12435 d0662ea400c199b080e8914bef70e1e3 815 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 14 811 8.4E-287 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 R615_RS12435 d0662ea400c199b080e8914bef70e1e3 815 SUPERFAMILY SSF69593 273 493 7.32E-23 T 22-04-2016 R615_RS12435 d0662ea400c199b080e8914bef70e1e3 815 PIRSF PIRSF000437 20 814 2.8E-234 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 R615_RS12435 d0662ea400c199b080e8914bef70e1e3 815 PANTHER PTHR12563:SF14 4 129 3.0E-250 T 22-04-2016 R615_RS12435 d0662ea400c199b080e8914bef70e1e3 815 PANTHER PTHR12563:SF14 148 786 3.0E-250 T 22-04-2016 R615_RS12435 d0662ea400c199b080e8914bef70e1e3 815 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 815 25.007 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 R615_RS12435 d0662ea400c199b080e8914bef70e1e3 815 PIRSF PIRSF500064 4 815 3.2E-244 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 R615_RS12435 d0662ea400c199b080e8914bef70e1e3 815 PANTHER PTHR12563 4 129 3.0E-250 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 R615_RS12435 d0662ea400c199b080e8914bef70e1e3 815 Pfam PF01553 Acyltransferase 294 425 3.4E-21 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS08410 b4b3af25d6cbeb9f74f9913274724f94 315 PANTHER PTHR11082:SF29 1 312 8.9E-138 T 22-04-2016 R615_RS08410 b4b3af25d6cbeb9f74f9913274724f94 315 SUPERFAMILY SSF51395 1 309 1.03E-66 T 22-04-2016 R615_RS08410 b4b3af25d6cbeb9f74f9913274724f94 315 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 311 4.6E-137 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 R615_RS08410 b4b3af25d6cbeb9f74f9913274724f94 315 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 77 95 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 R615_RS08410 b4b3af25d6cbeb9f74f9913274724f94 315 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 314 47.833 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 R615_RS08410 b4b3af25d6cbeb9f74f9913274724f94 315 PANTHER PTHR11082 1 312 8.9E-138 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 R615_RS08410 b4b3af25d6cbeb9f74f9913274724f94 315 Pfam PF01207 Dihydrouridine synthase (Dus) 1 308 9.3E-82 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 R615_RS08410 b4b3af25d6cbeb9f74f9913274724f94 315 PIRSF PIRSF006621 1 313 1.4E-65 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 R615_RS08410 b4b3af25d6cbeb9f74f9913274724f94 315 Gene3D G3DSA:3.20.20.70 1 236 1.7E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS02060 a2153431c7430515a58cd4d1163280ae 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site R615_RS02060 a2153431c7430515a58cd4d1163280ae 89 PANTHER PTHR33705:SF2 1 89 1.2E-39 T 22-04-2016 R615_RS02060 a2153431c7430515a58cd4d1163280ae 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 5.3E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like R615_RS02060 a2153431c7430515a58cd4d1163280ae 89 SUPERFAMILY SSF55594 1 87 2.75E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like R615_RS02060 a2153431c7430515a58cd4d1163280ae 89 PANTHER PTHR33705 1 89 1.2E-39 T 22-04-2016 R615_RS02060 a2153431c7430515a58cd4d1163280ae 89 Gene3D G3DSA:3.30.1340.10 1 87 2.2E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like R615_RS02060 a2153431c7430515a58cd4d1163280ae 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 6.8E-32 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like R615_RS02060 a2153431c7430515a58cd4d1163280ae 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site R615_RS02060 a2153431c7430515a58cd4d1163280ae 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.5E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like R615_RS02060 a2153431c7430515a58cd4d1163280ae 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.5E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like R615_RS02060 a2153431c7430515a58cd4d1163280ae 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.5E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like R615_RS00095 d8e7fda659a2bb73de6a397c821ecdc9 284 PANTHER PTHR11558 8 283 1.0E-120 T 22-04-2016 R615_RS00095 d8e7fda659a2bb73de6a397c821ecdc9 284 TIGRFAM TIGR00417 speE: spermidine synthase 14 278 6.3E-104 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 R615_RS00095 d8e7fda659a2bb73de6a397c821ecdc9 284 SUPERFAMILY SSF53335 6 281 3.41E-88 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS00095 d8e7fda659a2bb73de6a397c821ecdc9 284 Gene3D G3DSA:2.30.140.10 6 56 2.1E-18 T 22-04-2016 R615_RS00095 d8e7fda659a2bb73de6a397c821ecdc9 284 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 22-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 R615_RS00095 d8e7fda659a2bb73de6a397c821ecdc9 284 Pfam PF01564 Spermine/spermidine synthase 11 239 6.0E-79 T 22-04-2016 R615_RS00095 d8e7fda659a2bb73de6a397c821ecdc9 284 Gene3D G3DSA:3.40.50.150 57 281 1.0E-80 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS00095 d8e7fda659a2bb73de6a397c821ecdc9 284 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 5 284 39.456 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 R615_RS03830 83e96192fa571727b116bfee105e9eb0 190 PRINTS PR00773 GrpE protein signature 79 94 3.0E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 R615_RS03830 83e96192fa571727b116bfee105e9eb0 190 PRINTS PR00773 GrpE protein signature 133 148 3.0E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 R615_RS03830 83e96192fa571727b116bfee105e9eb0 190 PRINTS PR00773 GrpE protein signature 160 179 3.0E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 R615_RS03830 83e96192fa571727b116bfee105e9eb0 190 PRINTS PR00773 GrpE protein signature 51 67 3.0E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 R615_RS03830 83e96192fa571727b116bfee105e9eb0 190 PANTHER PTHR21237 1 184 2.2E-60 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 R615_RS03830 83e96192fa571727b116bfee105e9eb0 190 Gene3D G3DSA:2.30.22.10 126 182 8.8E-27 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 R615_RS03830 83e96192fa571727b116bfee105e9eb0 190 SUPERFAMILY SSF58014 34 123 2.09E-24 T 22-04-2016 R615_RS03830 83e96192fa571727b116bfee105e9eb0 190 SUPERFAMILY SSF51064 127 182 4.18E-20 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 R615_RS03830 83e96192fa571727b116bfee105e9eb0 190 Hamap MF_01151 Protein GrpE [grpE]. 2 181 20.558 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 R615_RS03830 83e96192fa571727b116bfee105e9eb0 190 ProSitePatterns PS01071 grpE protein signature. 136 179 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 R615_RS03830 83e96192fa571727b116bfee105e9eb0 190 Gene3D G3DSA:3.90.20.20 30 123 7.2E-30 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil R615_RS03830 83e96192fa571727b116bfee105e9eb0 190 Pfam PF01025 GrpE 23 181 5.6E-52 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 R615_RS05330 4c563e4135d1fdeedc9080ecb0892fa9 284 Hamap MF_00050 Elongation factor Ts [tsf]. 1 282 71.464 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 R615_RS05330 4c563e4135d1fdeedc9080ecb0892fa9 284 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 R615_RS05330 4c563e4135d1fdeedc9080ecb0892fa9 284 PANTHER PTHR11741 1 284 5.7E-110 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 R615_RS05330 4c563e4135d1fdeedc9080ecb0892fa9 284 Pfam PF00889 Elongation factor TS 71 265 9.8E-62 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 R615_RS05330 4c563e4135d1fdeedc9080ecb0892fa9 284 Gene3D G3DSA:3.30.479.20 144 180 1.7E-26 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 R615_RS05330 4c563e4135d1fdeedc9080ecb0892fa9 284 Gene3D G3DSA:3.30.479.20 229 264 1.7E-26 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 R615_RS05330 4c563e4135d1fdeedc9080ecb0892fa9 284 SUPERFAMILY SSF46934 3 56 7.37E-17 T 22-04-2016 IPR009060 UBA-like GO:0005515 R615_RS05330 4c563e4135d1fdeedc9080ecb0892fa9 284 Gene3D G3DSA:1.10.8.10 2 55 4.3E-24 T 22-04-2016 R615_RS05330 4c563e4135d1fdeedc9080ecb0892fa9 284 Gene3D G3DSA:1.10.286.20 185 228 1.4E-17 T 22-04-2016 R615_RS05330 4c563e4135d1fdeedc9080ecb0892fa9 284 SUPERFAMILY SSF54713 57 140 3.05E-15 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 R615_RS05330 4c563e4135d1fdeedc9080ecb0892fa9 284 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 283 7.5E-94 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 R615_RS05330 4c563e4135d1fdeedc9080ecb0892fa9 284 SUPERFAMILY SSF54713 143 283 4.84E-50 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 R615_RS01665 0d960c898c9afc09dfb449368c726d67 293 Pfam PF09850 Type VI secretion system protein DotU 52 255 1.4E-68 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU R615_RS01665 0d960c898c9afc09dfb449368c726d67 293 PANTHER PTHR38033 21 272 1.1E-50 T 22-04-2016 R615_RS01665 0d960c898c9afc09dfb449368c726d67 293 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 51 260 1.2E-73 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU R615_RS01665 0d960c898c9afc09dfb449368c726d67 293 PANTHER PTHR38033:SF1 21 272 1.1E-50 T 22-04-2016 R615_RS04385 805d5f9e3af82027a716991808f35723 173 PANTHER PTHR23501:SF51 68 157 6.0E-52 T 22-04-2016 R615_RS04385 805d5f9e3af82027a716991808f35723 173 Gene3D G3DSA:1.20.1250.20 65 162 4.7E-14 T 22-04-2016 R615_RS04385 805d5f9e3af82027a716991808f35723 173 Pfam PF07690 Major Facilitator Superfamily 67 166 2.0E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 R615_RS04385 805d5f9e3af82027a716991808f35723 173 SUPERFAMILY SSF103473 65 165 1.31E-21 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS04385 805d5f9e3af82027a716991808f35723 173 PANTHER PTHR23501 68 157 6.0E-52 T 22-04-2016 R615_RS00695 67ff1e3b7a60ad3272704c61e6630815 131 Pfam PF03061 Thioesterase superfamily 29 104 1.8E-11 T 22-04-2016 IPR006683 Thioesterase domain R615_RS00695 67ff1e3b7a60ad3272704c61e6630815 131 SUPERFAMILY SSF54637 11 131 2.75E-28 T 22-04-2016 IPR029069 HotDog domain R615_RS00695 67ff1e3b7a60ad3272704c61e6630815 131 Gene3D G3DSA:3.10.129.10 8 131 1.4E-31 T 22-04-2016 IPR029069 HotDog domain R615_RS00695 67ff1e3b7a60ad3272704c61e6630815 131 PANTHER PTHR11049:SF5 3 131 9.4E-44 T 22-04-2016 R615_RS00695 67ff1e3b7a60ad3272704c61e6630815 131 PANTHER PTHR11049 3 131 9.4E-44 T 22-04-2016 R615_RS03945 51198d0894df4e98566887c562274597 849 SUPERFAMILY SSF50447 523 605 9.77E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS03945 51198d0894df4e98566887c562274597 849 Gene3D G3DSA:2.40.30.10 521 613 6.3E-24 T 22-04-2016 R615_RS03945 51198d0894df4e98566887c562274597 849 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 267 849 1.4E-255 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 R615_RS03945 51198d0894df4e98566887c562274597 849 Gene3D G3DSA:3.40.50.300 346 508 8.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03945 51198d0894df4e98566887c562274597 849 ProSitePatterns PS01176 Initiation factor 2 signature. 800 822 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 R615_RS03945 51198d0894df4e98566887c562274597 849 SUPERFAMILY SSF50447 751 847 4.32E-32 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS03945 51198d0894df4e98566887c562274597 849 Gene3D G3DSA:3.30.56.50 2 51 1.5E-17 T 22-04-2016 R615_RS03945 51198d0894df4e98566887c562274597 849 Gene3D G3DSA:2.40.30.10 751 847 2.1E-37 T 22-04-2016 R615_RS03945 51198d0894df4e98566887c562274597 849 SUPERFAMILY SSF52156 630 756 5.1E-35 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 R615_RS03945 51198d0894df4e98566887c562274597 849 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 847 17.246 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 R615_RS03945 51198d0894df4e98566887c562274597 849 SUPERFAMILY SSF46955 3 51 9.15E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain R615_RS03945 51198d0894df4e98566887c562274597 849 PANTHER PTHR23115:SF184 334 677 8.7E-202 T 22-04-2016 R615_RS03945 51198d0894df4e98566887c562274597 849 PANTHER PTHR23115:SF184 702 847 8.7E-202 T 22-04-2016 R615_RS03945 51198d0894df4e98566887c562274597 849 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 273 322 7.7E-17 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal R615_RS03945 51198d0894df4e98566887c562274597 849 Pfam PF00009 Elongation factor Tu GTP binding domain 354 510 8.9E-35 T 22-04-2016 R615_RS03945 51198d0894df4e98566887c562274597 849 Gene3D G3DSA:3.40.50.10050 649 728 4.5E-24 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 R615_RS03945 51198d0894df4e98566887c562274597 849 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 97 3.6E-11 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial R615_RS03945 51198d0894df4e98566887c562274597 849 SUPERFAMILY SSF52540 345 518 4.79E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03945 51198d0894df4e98566887c562274597 849 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 353 508 8.5E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS03945 51198d0894df4e98566887c562274597 849 PANTHER PTHR23115 334 677 8.7E-202 T 22-04-2016 R615_RS03945 51198d0894df4e98566887c562274597 849 PANTHER PTHR23115 702 847 8.7E-202 T 22-04-2016 R615_RS03945 51198d0894df4e98566887c562274597 849 Pfam PF11987 Translation-initiation factor 2 637 739 4.8E-35 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 R615_RS07970 cd10a5b72b18413513c634d774ee7ac8 278 SUPERFAMILY SSF55620 150 276 5.28E-29 T 22-04-2016 R615_RS07970 cd10a5b72b18413513c634d774ee7ac8 278 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 78 2.4E-6 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein R615_RS07970 cd10a5b72b18413513c634d774ee7ac8 278 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 149 274 6.3E-7 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein R615_RS07970 cd10a5b72b18413513c634d774ee7ac8 278 Gene3D G3DSA:3.30.479.10 151 276 9.4E-24 T 22-04-2016 R615_RS07970 cd10a5b72b18413513c634d774ee7ac8 278 Gene3D G3DSA:3.30.479.10 15 150 9.8E-24 T 22-04-2016 R615_RS07970 cd10a5b72b18413513c634d774ee7ac8 278 SUPERFAMILY SSF55620 1 154 1.33E-22 T 22-04-2016 R615_RS14205 e0594ce68c280d59a071a35ef55580cc 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS14205 e0594ce68c280d59a071a35ef55580cc 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.527 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 R615_RS14205 e0594ce68c280d59a071a35ef55580cc 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.3E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 R615_RS14205 e0594ce68c280d59a071a35ef55580cc 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.3E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 R615_RS14205 e0594ce68c280d59a071a35ef55580cc 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.3E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 R615_RS14205 e0594ce68c280d59a071a35ef55580cc 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.3E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 R615_RS14205 e0594ce68c280d59a071a35ef55580cc 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.6E-25 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 R615_RS14205 e0594ce68c280d59a071a35ef55580cc 71 PANTHER PTHR21109 1 71 9.7E-24 T 22-04-2016 R615_RS14205 e0594ce68c280d59a071a35ef55580cc 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 1.0E-9 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 R615_RS14205 e0594ce68c280d59a071a35ef55580cc 71 Pfam PF01165 Ribosomal protein S21 4 56 2.9E-23 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 Gene3D G3DSA:3.30.43.10 203 251 8.7E-16 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 201 362 9.4E-45 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 473 8.0E-158 T 22-04-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 Gene3D G3DSA:3.30.465.10 252 363 2.6E-36 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 SUPERFAMILY SSF54292 2 86 8.56E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 SUPERFAMILY SSF55447 371 477 8.11E-29 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 Gene3D G3DSA:1.10.150.120 85 176 5.4E-32 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 PANTHER PTHR11908 1 476 1.4E-115 T 22-04-2016 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 SUPERFAMILY SSF56176 197 362 5.61E-46 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 70 8.0E-4 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 Gene3D G3DSA:3.30.390.50 373 478 6.6E-31 T 22-04-2016 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 Gene3D G3DSA:3.10.20.30 2 81 8.4E-23 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 PIRSF PIRSF036557 1 485 8.0E-156 T 22-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 SUPERFAMILY SSF47741 89 172 1.57E-29 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 375 473 2.6E-27 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 SMART SM01092 373 474 3.6E-25 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal R615_RS15175 2d9594917faa00c856cd973a19b2c679 485 Pfam PF01799 [2Fe-2S] binding domain 81 160 1.1E-26 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 R615_RS04835 5d73e70681fc5bc7f7f1c2f96163cfed 356 PANTHER PTHR10366 2 353 5.3E-165 T 22-04-2016 R615_RS04835 5d73e70681fc5bc7f7f1c2f96163cfed 356 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 2.5E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04835 5d73e70681fc5bc7f7f1c2f96163cfed 356 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 340 4.4E-148 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 R615_RS04835 5d73e70681fc5bc7f7f1c2f96163cfed 356 PANTHER PTHR10366:SF41 2 353 5.3E-165 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 R615_RS04835 5d73e70681fc5bc7f7f1c2f96163cfed 356 Gene3D G3DSA:3.40.50.720 1 191 6.4E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04835 5d73e70681fc5bc7f7f1c2f96163cfed 356 Gene3D G3DSA:3.90.25.10 192 342 1.6E-54 T 22-04-2016 R615_RS04835 5d73e70681fc5bc7f7f1c2f96163cfed 356 SUPERFAMILY SSF51735 1 338 1.28E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS15305 7b46d3d0ef2d599f87fb63b9f4bf08b3 64 Pfam PF14255 Cysteine-rich CPXCG 9 56 3.2E-21 T 22-04-2016 IPR025990 Cysteine-rich CPXCG protein R615_RS15305 7b46d3d0ef2d599f87fb63b9f4bf08b3 64 PIRSF PIRSF037225 1 64 1.1E-22 T 22-04-2016 IPR017143 Uncharacterised conserved protein UCP037225 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 130 139 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 Gene3D G3DSA:3.40.50.620 113 444 4.0E-110 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 SUPERFAMILY SSF52374 113 451 1.66E-91 T 22-04-2016 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 Pfam PF05746 DALR anticodon binding domain 440 561 7.2E-35 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 561 26.008 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 Gene3D G3DSA:1.10.730.10 445 561 1.1E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 Gene3D G3DSA:3.30.1360.70 4 110 1.3E-30 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 135 4.2E-23 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 159 172 4.2E-23 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 135 151 4.2E-23 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 307 328 4.2E-23 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 SUPERFAMILY SSF55190 6 111 1.09E-24 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 7 561 3.9E-137 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 PANTHER PTHR11956:SF6 1 561 2.2E-237 T 22-04-2016 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 PANTHER PTHR11956 1 561 2.2E-237 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 91 1.3E-24 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 Pfam PF00750 tRNA synthetases class I (R) 101 409 1.8E-27 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 SMART SM01016 3 91 2.9E-37 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 SMART SM00836 440 561 1.1E-54 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 R615_RS01530 e0eebf38c864463c24f951ee8b5a414f 561 SUPERFAMILY SSF47323 434 561 9.16E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS03055 a011fe4d3b4894a34c90757f09311d58 155 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 2.1E-52 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS03055 a011fe4d3b4894a34c90757f09311d58 155 PANTHER PTHR33603 1 155 9.7E-66 T 22-04-2016 R615_RS03055 a011fe4d3b4894a34c90757f09311d58 155 PANTHER PTHR33603:SF1 1 155 9.7E-66 T 22-04-2016 R615_RS03055 a011fe4d3b4894a34c90757f09311d58 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.868 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS03055 a011fe4d3b4894a34c90757f09311d58 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 9.7E-59 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS03055 a011fe4d3b4894a34c90757f09311d58 155 Gene3D G3DSA:3.40.1280.10 1 155 8.1E-56 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal R615_RS03055 a011fe4d3b4894a34c90757f09311d58 155 PIRSF PIRSF004505 1 155 2.4E-46 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS03055 a011fe4d3b4894a34c90757f09311d58 155 SUPERFAMILY SSF75217 1 154 8.72E-52 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases R615_RS01215 9a581ae3f868049170ab52008854e047 314 PANTHER PTHR21621 1 314 1.5E-143 T 22-04-2016 R615_RS01215 9a581ae3f868049170ab52008854e047 314 Gene3D G3DSA:3.30.1490.20 138 192 3.7E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS01215 9a581ae3f868049170ab52008854e047 314 SUPERFAMILY SSF52440 3 123 1.01E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS01215 9a581ae3f868049170ab52008854e047 314 Gene3D G3DSA:3.40.50.20 3 130 6.3E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS01215 9a581ae3f868049170ab52008854e047 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 5.7E-42 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 R615_RS01215 9a581ae3f868049170ab52008854e047 314 PANTHER PTHR21621:SF4 1 314 1.5E-143 T 22-04-2016 R615_RS01215 9a581ae3f868049170ab52008854e047 314 Gene3D G3DSA:3.30.470.20 193 301 3.6E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS01215 9a581ae3f868049170ab52008854e047 314 SUPERFAMILY SSF56059 124 311 3.09E-56 T 22-04-2016 R615_RS01215 9a581ae3f868049170ab52008854e047 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 310 3.5E-131 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 R615_RS01215 9a581ae3f868049170ab52008854e047 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 2.5E-76 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 R615_RS01215 9a581ae3f868049170ab52008854e047 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 161.269 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 R615_RS00440 70f0c602300cb34a0a052f4204d65e30 695 SUPERFAMILY SSF56935 24 695 6.59E-100 T 22-04-2016 R615_RS00440 70f0c602300cb34a0a052f4204d65e30 695 Gene3D G3DSA:2.170.130.10 24 159 9.7E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS00440 70f0c602300cb34a0a052f4204d65e30 695 PANTHER PTHR32552 24 695 2.1E-89 T 22-04-2016 R615_RS00440 70f0c602300cb34a0a052f4204d65e30 695 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 149 2.6E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS00440 70f0c602300cb34a0a052f4204d65e30 695 Gene3D G3DSA:2.40.170.20 160 695 2.9E-71 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS00440 70f0c602300cb34a0a052f4204d65e30 695 PANTHER PTHR32552:SF33 24 695 2.1E-89 T 22-04-2016 R615_RS03960 5a6a190fb25067d08517bbde6261deb2 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03960 5a6a190fb25067d08517bbde6261deb2 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-23 T 22-04-2016 R615_RS03960 5a6a190fb25067d08517bbde6261deb2 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.2E-38 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 R615_RS03960 5a6a190fb25067d08517bbde6261deb2 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.631 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 R615_RS03960 5a6a190fb25067d08517bbde6261deb2 89 SUPERFAMILY SSF47060 3 89 6.18E-36 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 R615_RS03960 5a6a190fb25067d08517bbde6261deb2 89 Pfam PF00312 Ribosomal protein S15 8 88 4.6E-37 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03960 5a6a190fb25067d08517bbde6261deb2 89 SMART SM01387 8 88 3.9E-52 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS03960 5a6a190fb25067d08517bbde6261deb2 89 PANTHER PTHR23321 1 89 8.9E-46 T 22-04-2016 R615_RS03960 5a6a190fb25067d08517bbde6261deb2 89 Gene3D G3DSA:1.10.287.10 3 89 3.8E-39 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 R615_RS12505 df44bdca152380d5a81c1f1675cd438d 213 SUPERFAMILY SSF57863 77 167 3.92E-11 T 22-04-2016 R615_RS12505 df44bdca152380d5a81c1f1675cd438d 213 PANTHER PTHR33991 1 213 2.5E-21 T 22-04-2016 R615_RS12505 df44bdca152380d5a81c1f1675cd438d 213 Pfam PF02565 Recombination protein O C terminal 74 175 1.7E-17 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 R615_RS12505 df44bdca152380d5a81c1f1675cd438d 213 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 170 5.9E-15 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 R615_RS08445 3f165606ff1eb6495bbb99e4571a9b89 119 PANTHER PTHR33473 21 119 2.2E-33 T 22-04-2016 R615_RS08445 3f165606ff1eb6495bbb99e4571a9b89 119 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 12 112 27.912 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS R615_RS08445 3f165606ff1eb6495bbb99e4571a9b89 119 Gene3D G3DSA:3.30.1390.10 18 117 4.5E-42 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like R615_RS08445 3f165606ff1eb6495bbb99e4571a9b89 119 SUPERFAMILY SSF54736 32 115 1.88E-31 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like R615_RS08445 3f165606ff1eb6495bbb99e4571a9b89 119 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 34 113 9.2E-34 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 R615_RS11240 89d10cf23162c2de5850ebd5ae91244f 337 Pfam PF07584 Aerotolerance regulator N-terminal 6 75 4.1E-6 T 22-04-2016 IPR024163 Aerotolerance regulator, N-terminal R615_RS11240 89d10cf23162c2de5850ebd5ae91244f 337 Gene3D G3DSA:3.40.50.410 87 284 1.4E-29 T 22-04-2016 IPR002035 von Willebrand factor, type A R615_RS11240 89d10cf23162c2de5850ebd5ae91244f 337 Pfam PF00092 von Willebrand factor type A domain 90 281 1.5E-27 T 22-04-2016 IPR002035 von Willebrand factor, type A R615_RS11240 89d10cf23162c2de5850ebd5ae91244f 337 PANTHER PTHR22550:SF12 1 317 1.5E-134 T 22-04-2016 R615_RS11240 89d10cf23162c2de5850ebd5ae91244f 337 SUPERFAMILY SSF53300 85 284 6.38E-40 T 22-04-2016 IPR002035 von Willebrand factor, type A R615_RS11240 89d10cf23162c2de5850ebd5ae91244f 337 SMART SM00327 88 289 5.2E-24 T 22-04-2016 IPR002035 von Willebrand factor, type A R615_RS11240 89d10cf23162c2de5850ebd5ae91244f 337 PANTHER PTHR22550 1 317 1.5E-134 T 22-04-2016 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 SUPERFAMILY SSF82714 721 808 1.57E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 Gene3D G3DSA:3.30.70.1430 568 669 3.3E-34 T 22-04-2016 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 Gene3D G3DSA:3.30.70.1430 38 139 9.3E-35 T 22-04-2016 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 SUPERFAMILY SSF82693 38 132 2.25E-26 T 22-04-2016 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 SUPERFAMILY SSF82693 135 182 2.27E-27 T 22-04-2016 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 SUPERFAMILY SSF82693 274 330 2.27E-27 T 22-04-2016 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1030 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 PANTHER PTHR32063:SF13 1 1027 0.0 T 22-04-2016 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 2.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.5E-110 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 SUPERFAMILY SSF82693 566 669 1.88E-31 T 22-04-2016 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 SUPERFAMILY SSF82866 805 1030 1.44E-44 T 22-04-2016 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 Gene3D G3DSA:1.10.3850.10 813 1026 1.8E-58 T 22-04-2016 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 Gene3D G3DSA:1.10.3850.10 281 499 6.3E-59 T 22-04-2016 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 Gene3D G3DSA:3.30.2090.10 181 275 3.1E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 Gene3D G3DSA:3.30.2090.10 721 809 3.0E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 SUPERFAMILY SSF82714 182 272 4.71E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 SUPERFAMILY SSF82866 296 497 1.57E-48 T 22-04-2016 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 Pfam PF00873 AcrB/AcrD/AcrF family 1 1024 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS12040 0d3a25ef31f97d93c01a8f15f8706755 1043 PANTHER PTHR32063 1 1027 0.0 T 22-04-2016 R615_RS02770 08597771f3a4eea0c4cad3ed4a53a399 571 PANTHER PTHR30258 1 570 5.2E-235 T 22-04-2016 R615_RS02770 08597771f3a4eea0c4cad3ed4a53a399 571 SUPERFAMILY SSF52540 175 562 6.62E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02770 08597771f3a4eea0c4cad3ed4a53a399 571 Gene3D G3DSA:3.40.50.300 293 565 3.2E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02770 08597771f3a4eea0c4cad3ed4a53a399 571 SMART SM00382 316 441 7.7E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS02770 08597771f3a4eea0c4cad3ed4a53a399 571 Gene3D G3DSA:3.30.450.90 175 288 6.7E-48 T 22-04-2016 R615_RS02770 08597771f3a4eea0c4cad3ed4a53a399 571 SUPERFAMILY SSF160246 5 146 1.06E-38 T 22-04-2016 R615_RS02770 08597771f3a4eea0c4cad3ed4a53a399 571 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 R615_RS02770 08597771f3a4eea0c4cad3ed4a53a399 571 Pfam PF00437 Type II/IV secretion system protein 195 455 7.9E-80 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 R615_RS02770 08597771f3a4eea0c4cad3ed4a53a399 571 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 46 150 1.0E-23 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 R615_RS02770 08597771f3a4eea0c4cad3ed4a53a399 571 PANTHER PTHR30258:SF11 1 570 5.2E-235 T 22-04-2016 R615_RS03175 2be9a7f7711e18b7bbb3596c15c11a39 322 Gene3D G3DSA:1.10.600.10 2 321 1.4E-101 T 22-04-2016 IPR008949 Isoprenoid synthase domain R615_RS03175 2be9a7f7711e18b7bbb3596c15c11a39 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 R615_RS03175 2be9a7f7711e18b7bbb3596c15c11a39 322 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 R615_RS03175 2be9a7f7711e18b7bbb3596c15c11a39 322 Pfam PF00348 Polyprenyl synthetase 31 263 5.4E-76 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 R615_RS03175 2be9a7f7711e18b7bbb3596c15c11a39 322 SUPERFAMILY SSF48576 4 321 1.6E-98 T 22-04-2016 IPR008949 Isoprenoid synthase domain R615_RS03175 2be9a7f7711e18b7bbb3596c15c11a39 322 PANTHER PTHR12001 3 322 1.0E-111 T 22-04-2016 IPR017446 Polyprenyl synthetase-related R615_RS03175 2be9a7f7711e18b7bbb3596c15c11a39 322 PANTHER PTHR12001:SF47 3 322 1.0E-111 T 22-04-2016 R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 Pfam PF00633 Helix-hairpin-helix motif 100 129 1.1E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 193 209 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 7 273 9.7E-112 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 168 2.7E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 SUPERFAMILY SSF55811 221 347 3.01E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 Gene3D G3DSA:3.90.79.10 231 348 7.6E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 PANTHER PTHR10359 7 306 3.2E-99 T 22-04-2016 R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 SUPERFAMILY SSF48150 6 225 1.54E-76 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 SMART SM00478 40 191 5.7E-46 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 Gene3D G3DSA:1.10.340.30 23 123 4.3E-44 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 193 209 5.7E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 Gene3D G3DSA:1.10.1670.10 124 225 6.6E-39 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal R615_RS01570 5d8bad1198bed4a5b4770025655ab96b 349 Pfam PF14815 NUDIX domain 237 346 5.7E-24 T 22-04-2016 IPR029119 MutY, C-terminal R615_RS15795 577abad880e087776b4ae545a124209b 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 116 4.9E-41 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15795 577abad880e087776b4ae545a124209b 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 26.124 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15795 577abad880e087776b4ae545a124209b 116 PANTHER PTHR12899 1 116 3.3E-37 T 22-04-2016 R615_RS15795 577abad880e087776b4ae545a124209b 116 SUPERFAMILY SSF53137 4 114 5.23E-48 T 22-04-2016 R615_RS15795 577abad880e087776b4ae545a124209b 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 5.7E-40 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15795 577abad880e087776b4ae545a124209b 116 Gene3D G3DSA:3.30.420.100 24 116 3.3E-37 T 22-04-2016 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.973 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 SUPERFAMILY SSF51735 123 279 6.79E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 Gene3D G3DSA:3.40.192.10 7 140 5.5E-50 T 22-04-2016 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 4.3E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 SUPERFAMILY SSF53223 1 122 3.36E-39 T 22-04-2016 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 1.5E-67 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 Gene3D G3DSA:3.40.50.720 141 264 6.6E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 R615_RS08140 e90b60f712a216b214a90ce89957b66b 285 PANTHER PTHR10025 1 280 1.1E-160 T 22-04-2016 R615_RS06780 651bb14f045fa27e26f7d66ea4b3c417 172 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 R615_RS06780 651bb14f045fa27e26f7d66ea4b3c417 172 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.379 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 R615_RS06780 651bb14f045fa27e26f7d66ea4b3c417 172 SUPERFAMILY SSF53098 3 154 1.18E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS06780 651bb14f045fa27e26f7d66ea4b3c417 172 Gene3D G3DSA:3.30.420.10 3 155 1.6E-65 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS06780 651bb14f045fa27e26f7d66ea4b3c417 172 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 8.1E-63 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 R615_RS06780 651bb14f045fa27e26f7d66ea4b3c417 172 PANTHER PTHR30194 1 169 2.2E-69 T 22-04-2016 R615_RS06780 651bb14f045fa27e26f7d66ea4b3c417 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.3E-41 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 R615_RS06780 651bb14f045fa27e26f7d66ea4b3c417 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.3E-41 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 R615_RS06780 651bb14f045fa27e26f7d66ea4b3c417 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.3E-41 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 R615_RS06780 651bb14f045fa27e26f7d66ea4b3c417 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.3E-41 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 R615_RS06780 651bb14f045fa27e26f7d66ea4b3c417 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.3E-41 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 R615_RS06780 651bb14f045fa27e26f7d66ea4b3c417 172 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 154 1.1E-65 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 R615_RS06530 4232d3543a3359432dc37be4525a8701 197 PANTHER PTHR30390 4 194 1.4E-73 T 22-04-2016 R615_RS06530 4232d3543a3359432dc37be4525a8701 197 Gene3D G3DSA:3.40.50.10490 6 193 3.1E-56 T 22-04-2016 R615_RS06530 4232d3543a3359432dc37be4525a8701 197 Pfam PF13580 SIS domain 28 148 7.3E-26 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 R615_RS06530 4232d3543a3359432dc37be4525a8701 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 3 191 35.194 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 R615_RS06530 4232d3543a3359432dc37be4525a8701 197 SUPERFAMILY SSF53697 6 190 4.0E-48 T 22-04-2016 R615_RS06530 4232d3543a3359432dc37be4525a8701 197 PANTHER PTHR30390:SF6 4 194 1.4E-73 T 22-04-2016 R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 Pfam PF00106 short chain dehydrogenase 8 189 3.1E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 Gene3D G3DSA:3.40.50.720 9 272 1.8E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 SUPERFAMILY SSF51735 8 270 2.84E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 PANTHER PTHR24322 12 134 1.4E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 PANTHER PTHR24322 150 181 1.4E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 9.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 9.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 9.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS10800 e97ea0c9ebffa51b2c369aefebb7b88a 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08275 5e282e5dfa9c240c0c5278b2f07af139 459 PIRSF PIRSF006603 15 459 1.7E-64 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS08275 5e282e5dfa9c240c0c5278b2f07af139 459 PANTHER PTHR11206:SF132 23 454 6.2E-54 T 22-04-2016 R615_RS08275 5e282e5dfa9c240c0c5278b2f07af139 459 Pfam PF01554 MatE 29 188 1.3E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS08275 5e282e5dfa9c240c0c5278b2f07af139 459 Pfam PF01554 MatE 260 418 1.0E-17 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS08275 5e282e5dfa9c240c0c5278b2f07af139 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 29 431 6.4E-61 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS08275 5e282e5dfa9c240c0c5278b2f07af139 459 PANTHER PTHR11206 23 454 6.2E-54 T 22-04-2016 R615_RS12485 786f6aa42c6b78358428f94ede3d9d52 310 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 44 62 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 R615_RS12485 786f6aa42c6b78358428f94ede3d9d52 310 PANTHER PTHR10314:SF100 14 307 6.3E-178 T 22-04-2016 R615_RS12485 786f6aa42c6b78358428f94ede3d9d52 310 Gene3D G3DSA:3.40.50.1100 54 154 2.0E-37 T 22-04-2016 R615_RS12485 786f6aa42c6b78358428f94ede3d9d52 310 PANTHER PTHR10314 14 307 6.3E-178 T 22-04-2016 R615_RS12485 786f6aa42c6b78358428f94ede3d9d52 310 TIGRFAM TIGR01138 cysM: cysteine synthase B 16 306 5.0E-151 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 R615_RS12485 786f6aa42c6b78358428f94ede3d9d52 310 SUPERFAMILY SSF53686 12 302 4.32E-88 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme R615_RS12485 786f6aa42c6b78358428f94ede3d9d52 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 295 1.9E-65 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme R615_RS12485 786f6aa42c6b78358428f94ede3d9d52 310 TIGRFAM TIGR01136 cysKM: cysteine synthase 18 306 1.1E-120 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 R615_RS12485 786f6aa42c6b78358428f94ede3d9d52 310 Gene3D G3DSA:3.40.50.1100 160 307 5.8E-81 T 22-04-2016 R615_RS12485 786f6aa42c6b78358428f94ede3d9d52 310 Gene3D G3DSA:3.40.50.1100 10 53 5.8E-81 T 22-04-2016 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 SUPERFAMILY SSF48452 291 407 2.98E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 Gene3D G3DSA:1.25.40.10 57 135 2.2E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 SUPERFAMILY SSF81901 64 263 3.66E-17 T 22-04-2016 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 Pfam PF13181 Tetratricopeptide repeat 85 114 0.085 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 Gene3D G3DSA:1.25.40.10 136 251 1.6E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 PANTHER PTHR23083 293 394 1.8E-20 T 22-04-2016 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 PANTHER PTHR23083 55 255 1.8E-20 T 22-04-2016 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 Pfam PF09295 ChAPs (Chs5p-Arf1p-binding proteins) 137 248 4.2E-5 T 22-04-2016 IPR015374 Chs5p-Arf1p binding R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 Gene3D G3DSA:1.25.40.10 348 415 1.7E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 Gene3D G3DSA:1.25.40.10 293 347 5.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 SMART SM00028 329 362 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 SMART SM00028 83 116 1.1 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 SMART SM00028 364 397 67.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 SMART SM00028 156 189 40.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS15235 534c36f934e6fa0d949c5b00563f33c9 421 SMART SM00028 191 224 32.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS09930 50ebc97b9929a59074588bc97a5ce3a0 134 SUPERFAMILY SSF55729 4 121 1.8E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS09930 50ebc97b9929a59074588bc97a5ce3a0 134 PANTHER PTHR13355:SF5 15 131 4.6E-17 T 22-04-2016 R615_RS09930 50ebc97b9929a59074588bc97a5ce3a0 134 Pfam PF00583 Acetyltransferase (GNAT) family 49 120 7.5E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS09930 50ebc97b9929a59074588bc97a5ce3a0 134 Gene3D G3DSA:3.40.630.30 4 121 4.0E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS09930 50ebc97b9929a59074588bc97a5ce3a0 134 PANTHER PTHR13355 15 131 4.6E-17 T 22-04-2016 R615_RS00930 d8ea89e04d206bea61b5d2d23642900e 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site R615_RS00930 d8ea89e04d206bea61b5d2d23642900e 224 Pfam PF04002 RadC-like JAB domain 103 222 5.8E-44 T 22-04-2016 IPR025657 RadC-like JAB domain R615_RS00930 d8ea89e04d206bea61b5d2d23642900e 224 PANTHER PTHR30471:SF5 1 224 1.9E-134 T 22-04-2016 R615_RS00930 d8ea89e04d206bea61b5d2d23642900e 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 2.9E-75 T 22-04-2016 IPR001405 RadC protein R615_RS00930 d8ea89e04d206bea61b5d2d23642900e 224 Gene3D G3DSA:3.40.140.10 101 224 3.9E-49 T 22-04-2016 R615_RS00930 d8ea89e04d206bea61b5d2d23642900e 224 SUPERFAMILY SSF102712 122 195 4.71E-5 T 22-04-2016 R615_RS00930 d8ea89e04d206bea61b5d2d23642900e 224 SUPERFAMILY SSF47781 18 90 5.34E-10 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 R615_RS00930 d8ea89e04d206bea61b5d2d23642900e 224 PANTHER PTHR30471 1 224 1.9E-134 T 22-04-2016 R615_RS06325 f3fd7424927489c3ed2d1f17f78f7560 1026 Gene3D G3DSA:2.130.10.10 47 212 1.0E-18 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 R615_RS06325 f3fd7424927489c3ed2d1f17f78f7560 1026 Gene3D G3DSA:2.120.10.30 213 491 2.3E-14 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like R615_RS06325 f3fd7424927489c3ed2d1f17f78f7560 1026 Gene3D G3DSA:1.10.760.10 671 753 3.2E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS06325 f3fd7424927489c3ed2d1f17f78f7560 1026 SUPERFAMILY SSF51004 45 233 1.36E-21 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain R615_RS06325 f3fd7424927489c3ed2d1f17f78f7560 1026 SUPERFAMILY SSF46626 672 776 7.45E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS06325 f3fd7424927489c3ed2d1f17f78f7560 1026 SUPERFAMILY SSF75011 178 491 2.22E-19 T 22-04-2016 R615_RS06325 f3fd7424927489c3ed2d1f17f78f7560 1026 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 51 152 2.4E-6 T 22-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region R615_RS05570 66643ffce955027f4c54430ff5184e33 221 TIGRFAM TIGR01298 RNaseT: ribonuclease T 13 211 1.3E-94 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 R615_RS05570 66643ffce955027f4c54430ff5184e33 221 Pfam PF00929 Exonuclease 23 197 3.5E-30 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III R615_RS05570 66643ffce955027f4c54430ff5184e33 221 PANTHER PTHR30231:SF2 12 218 1.3E-98 T 22-04-2016 R615_RS05570 66643ffce955027f4c54430ff5184e33 221 SMART SM00479 21 206 2.2E-24 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III R615_RS05570 66643ffce955027f4c54430ff5184e33 221 Hamap MF_00157 Ribonuclease T [rnt]. 1 221 101.346 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 R615_RS05570 66643ffce955027f4c54430ff5184e33 221 Gene3D G3DSA:3.30.420.10 13 213 2.2E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS05570 66643ffce955027f4c54430ff5184e33 221 PANTHER PTHR30231 12 218 1.3E-98 T 22-04-2016 R615_RS05570 66643ffce955027f4c54430ff5184e33 221 SUPERFAMILY SSF53098 12 210 1.57E-53 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 SUPERFAMILY SSF81660 342 544 2.4E-54 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 SUPERFAMILY SSF81653 125 234 1.96E-27 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 Pfam PF00689 Cation transporting ATPase, C-terminus 725 896 3.4E-34 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 Pfam PF13246 Cation transport ATPase (P-type) 396 484 5.3E-23 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 SUPERFAMILY SSF81665 23 125 2.88E-111 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 SUPERFAMILY SSF81665 690 902 2.88E-111 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 SUPERFAMILY SSF81665 235 329 2.88E-111 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 225 354 6.2E-23 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 609 730 2.9E-34 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 SUPERFAMILY SSF56784 333 353 1.98E-55 T 22-04-2016 IPR023214 HAD-like domain R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 SUPERFAMILY SSF56784 496 744 1.98E-55 T 22-04-2016 IPR023214 HAD-like domain R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 612 628 1.0E-17 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 499 517 1.0E-17 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 672 697 1.0E-17 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 640 656 1.0E-17 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 337 343 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 PANTHER PTHR24093 793 906 5.8E-284 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 PANTHER PTHR24093 21 776 5.8E-284 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 Gene3D G3DSA:1.20.1110.10 66 119 5.0E-102 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 Gene3D G3DSA:1.20.1110.10 609 899 5.0E-102 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 Gene3D G3DSA:3.40.1110.10 325 547 5.8E-55 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 SMART SM00831 14 87 2.2E-21 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 Gene3D G3DSA:2.70.150.10 120 234 6.6E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 Gene3D G3DSA:2.70.150.10 29 65 6.6E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 Pfam PF08282 haloacid dehalogenase-like hydrolase 625 686 3.0E-5 T 22-04-2016 IPR023214 HAD-like domain R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 Pfam PF00690 Cation transporter/ATPase, N-terminus 20 82 2.5E-15 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 640 659 4.1E-38 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 172 186 4.1E-38 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 562 572 4.1E-38 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 551 4.1E-38 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 676 4.1E-38 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 4.1E-38 T 22-04-2016 R615_RS10260 7e6fe4542dd99a70c6bc2530c4ac620f 909 Pfam PF00122 E1-E2 ATPase 93 326 1.0E-59 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 R615_RS12710 042ae97c455aecab4173896ffe42cac8 374 Gene3D G3DSA:3.40.720.10 21 359 3.5E-18 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 R615_RS12710 042ae97c455aecab4173896ffe42cac8 374 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 187 289 4.2E-7 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 R615_RS12710 042ae97c455aecab4173896ffe42cac8 374 SUPERFAMILY SSF53649 21 42 1.96E-22 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 R615_RS12710 042ae97c455aecab4173896ffe42cac8 374 SUPERFAMILY SSF53649 70 359 1.96E-22 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 R615_RS06455 2bec17347241014c06affb5c7cdfa00e 478 SUPERFAMILY SSF56801 2 478 4.58E-132 T 22-04-2016 R615_RS06455 2bec17347241014c06affb5c7cdfa00e 478 ProSitePatterns PS00455 Putative AMP-binding domain signature. 145 156 - T 22-04-2016 IPR020845 AMP-binding, conserved site R615_RS06455 2bec17347241014c06affb5c7cdfa00e 478 Gene3D G3DSA:2.30.38.10 312 384 8.0E-21 T 22-04-2016 R615_RS06455 2bec17347241014c06affb5c7cdfa00e 478 Pfam PF13193 AMP-binding enzyme C-terminal domain 400 472 3.6E-12 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain R615_RS06455 2bec17347241014c06affb5c7cdfa00e 478 Gene3D G3DSA:3.40.50.980 2 153 2.2E-34 T 22-04-2016 R615_RS06455 2bec17347241014c06affb5c7cdfa00e 478 Gene3D G3DSA:3.40.50.980 154 311 2.5E-43 T 22-04-2016 R615_RS06455 2bec17347241014c06affb5c7cdfa00e 478 Pfam PF00501 AMP-binding enzyme 6 390 1.2E-93 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 R615_RS06455 2bec17347241014c06affb5c7cdfa00e 478 Gene3D G3DSA:3.30.300.30 387 478 6.3E-22 T 22-04-2016 R615_RS06455 2bec17347241014c06affb5c7cdfa00e 478 PANTHER PTHR24096 2 478 9.4E-130 T 22-04-2016 R615_RS02240 30fc586871520349154d27c6d76795ec 91 Pfam PF04977 Septum formation initiator 12 90 1.8E-16 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 R615_RS02240 30fc586871520349154d27c6d76795ec 91 PANTHER PTHR37485:SF1 3 85 6.1E-18 T 22-04-2016 R615_RS02240 30fc586871520349154d27c6d76795ec 91 Hamap MF_00599 Cell division protein FtsB [ftsB]. 2 91 19.266 T 22-04-2016 IPR023081 Cell division protein FtsB R615_RS02240 30fc586871520349154d27c6d76795ec 91 PANTHER PTHR37485 3 85 6.1E-18 T 22-04-2016 R615_RS12605 b187cc47a63b96018a03b8a28c0f7a60 207 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 125 203 4.6E-22 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 R615_RS12605 b187cc47a63b96018a03b8a28c0f7a60 207 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 126 200 3.6E-17 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 R615_RS12605 b187cc47a63b96018a03b8a28c0f7a60 207 PANTHER PTHR33446 39 191 1.6E-19 T 22-04-2016 R615_RS12605 b187cc47a63b96018a03b8a28c0f7a60 207 PANTHER PTHR33446:SF1 39 191 1.6E-19 T 22-04-2016 R615_RS12605 b187cc47a63b96018a03b8a28c0f7a60 207 Gene3D G3DSA:3.30.1150.10 123 191 2.3E-10 T 22-04-2016 R615_RS12605 b187cc47a63b96018a03b8a28c0f7a60 207 SUPERFAMILY SSF74653 116 198 3.79E-26 T 22-04-2016 R615_RS04140 8c4806740f799ffaa1a5a359dad25a3e 244 SMART SM00382 41 223 6.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS04140 8c4806740f799ffaa1a5a359dad25a3e 244 Pfam PF00005 ABC transporter 33 173 6.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS04140 8c4806740f799ffaa1a5a359dad25a3e 244 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 19 244 3.7E-96 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE R615_RS04140 8c4806740f799ffaa1a5a359dad25a3e 244 PANTHER PTHR24220:SF404 18 227 2.9E-108 T 22-04-2016 R615_RS04140 8c4806740f799ffaa1a5a359dad25a3e 244 PANTHER PTHR24220 18 227 2.9E-108 T 22-04-2016 R615_RS04140 8c4806740f799ffaa1a5a359dad25a3e 244 SUPERFAMILY SSF52540 12 233 1.48E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04140 8c4806740f799ffaa1a5a359dad25a3e 244 Gene3D G3DSA:3.40.50.300 13 237 1.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14090 18cc847915af8d22b0d2eb63a1c9105b 142 PANTHER PTHR11075 14 142 2.1E-37 T 22-04-2016 R615_RS14090 18cc847915af8d22b0d2eb63a1c9105b 142 Pfam PF00472 RF-1 domain 14 138 2.0E-25 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 R615_RS14090 18cc847915af8d22b0d2eb63a1c9105b 142 SUPERFAMILY SSF75620 14 104 9.42E-12 T 22-04-2016 R615_RS14090 18cc847915af8d22b0d2eb63a1c9105b 142 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 27 43 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 R615_RS14090 18cc847915af8d22b0d2eb63a1c9105b 142 Gene3D G3DSA:3.30.160.200 13 112 1.9E-32 T 22-04-2016 R615_RS07810 a29d07c147019e7f39c84d3041cb4baa 405 Gene3D G3DSA:3.40.640.10 50 281 1.2E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS07810 a29d07c147019e7f39c84d3041cb4baa 405 Pfam PF00155 Aminotransferase class I and II 36 393 1.9E-52 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 R615_RS07810 a29d07c147019e7f39c84d3041cb4baa 405 PANTHER PTHR11751 9 404 8.4E-176 T 22-04-2016 R615_RS07810 a29d07c147019e7f39c84d3041cb4baa 405 SUPERFAMILY SSF53383 6 400 5.65E-96 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS07810 a29d07c147019e7f39c84d3041cb4baa 405 PANTHER PTHR11751:SF303 9 404 8.4E-176 T 22-04-2016 R615_RS07810 a29d07c147019e7f39c84d3041cb4baa 405 Gene3D G3DSA:3.90.1150.10 282 404 4.8E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS09390 678656a2010ea67e0670515a7c02bded 390 TIGRFAM TIGR01388 rnd: ribonuclease D 11 372 4.9E-115 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 R615_RS09390 678656a2010ea67e0670515a7c02bded 390 SUPERFAMILY SSF47819 302 376 1.18E-15 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 R615_RS09390 678656a2010ea67e0670515a7c02bded 390 Pfam PF01612 3'-5' exonuclease 11 176 1.7E-31 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 R615_RS09390 678656a2010ea67e0670515a7c02bded 390 PANTHER PTHR12124:SF42 1 341 6.1E-54 T 22-04-2016 R615_RS09390 678656a2010ea67e0670515a7c02bded 390 SMART SM00474 9 177 5.1E-29 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 R615_RS09390 678656a2010ea67e0670515a7c02bded 390 Hamap MF_01899 Ribonuclease D [rnd]. 9 376 37.828 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 R615_RS09390 678656a2010ea67e0670515a7c02bded 390 Gene3D G3DSA:3.30.420.10 11 185 1.9E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS09390 678656a2010ea67e0670515a7c02bded 390 PANTHER PTHR12124 1 341 6.1E-54 T 22-04-2016 R615_RS09390 678656a2010ea67e0670515a7c02bded 390 Pfam PF00570 HRDC domain 223 286 1.8E-11 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 R615_RS09390 678656a2010ea67e0670515a7c02bded 390 SUPERFAMILY SSF53098 9 195 1.23E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS09390 678656a2010ea67e0670515a7c02bded 390 SUPERFAMILY SSF47819 206 306 1.46E-23 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 R615_RS15815 29e731cc02f3961647a900adb19bd9af 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15815 29e731cc02f3961647a900adb19bd9af 179 Gene3D G3DSA:3.30.1440.10 1 179 1.5E-78 T 22-04-2016 IPR022803 Ribosomal protein L5 domain R615_RS15815 29e731cc02f3961647a900adb19bd9af 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.906 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15815 29e731cc02f3961647a900adb19bd9af 179 Pfam PF00281 Ribosomal protein L5 24 80 2.5E-26 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal R615_RS15815 29e731cc02f3961647a900adb19bd9af 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.5E-42 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal R615_RS15815 29e731cc02f3961647a900adb19bd9af 179 SUPERFAMILY SSF55282 3 179 1.46E-77 T 22-04-2016 IPR022803 Ribosomal protein L5 domain R615_RS15815 29e731cc02f3961647a900adb19bd9af 179 PIRSF PIRSF002161 1 179 1.8E-65 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 R615_RS15815 29e731cc02f3961647a900adb19bd9af 179 PANTHER PTHR11994 1 178 1.0E-95 T 22-04-2016 R615_RS01640 0b45b6962877a97a708e3a7b44c7e873 313 SMART SM00244 25 183 3.0E-64 T 22-04-2016 IPR001107 Band 7 domain R615_RS01640 0b45b6962877a97a708e3a7b44c7e873 313 PANTHER PTHR10264:SF27 9 313 2.0E-141 T 22-04-2016 R615_RS01640 0b45b6962877a97a708e3a7b44c7e873 313 SUPERFAMILY SSF117892 56 190 2.62E-42 T 22-04-2016 IPR001107 Band 7 domain R615_RS01640 0b45b6962877a97a708e3a7b44c7e873 313 Pfam PF16200 C-terminal region of band_7 248 310 3.5E-15 T 22-04-2016 IPR032435 Band 7, C-terminal extension R615_RS01640 0b45b6962877a97a708e3a7b44c7e873 313 PANTHER PTHR10264 9 313 2.0E-141 T 22-04-2016 IPR001972 Stomatin family GO:0016020 R615_RS01640 0b45b6962877a97a708e3a7b44c7e873 313 Pfam PF01145 SPFH domain / Band 7 family 30 199 2.3E-29 T 22-04-2016 IPR001107 Band 7 domain R615_RS01640 0b45b6962877a97a708e3a7b44c7e873 313 PRINTS PR00721 Stomatin signature 115 132 2.4E-29 T 22-04-2016 IPR001972 Stomatin family GO:0016020 R615_RS01640 0b45b6962877a97a708e3a7b44c7e873 313 PRINTS PR00721 Stomatin signature 80 101 2.4E-29 T 22-04-2016 IPR001972 Stomatin family GO:0016020 R615_RS01640 0b45b6962877a97a708e3a7b44c7e873 313 PRINTS PR00721 Stomatin signature 178 199 2.4E-29 T 22-04-2016 IPR001972 Stomatin family GO:0016020 R615_RS01640 0b45b6962877a97a708e3a7b44c7e873 313 PRINTS PR00721 Stomatin signature 159 177 2.4E-29 T 22-04-2016 IPR001972 Stomatin family GO:0016020 R615_RS01640 0b45b6962877a97a708e3a7b44c7e873 313 PRINTS PR00721 Stomatin signature 135 158 2.4E-29 T 22-04-2016 IPR001972 Stomatin family GO:0016020 R615_RS10130 95e1dd3e1f02018c3009e7ddbcc7959a 308 Gene3D G3DSA:3.30.450.20 17 140 3.1E-5 T 22-04-2016 R615_RS10130 95e1dd3e1f02018c3009e7ddbcc7959a 308 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 306 5.2E-48 T 22-04-2016 IPR000160 GGDEF domain R615_RS10130 95e1dd3e1f02018c3009e7ddbcc7959a 308 PANTHER PTHR10799:SF750 106 307 5.6E-29 T 22-04-2016 R615_RS10130 95e1dd3e1f02018c3009e7ddbcc7959a 308 SMART SM00267 136 308 1.5E-50 T 22-04-2016 IPR000160 GGDEF domain R615_RS10130 95e1dd3e1f02018c3009e7ddbcc7959a 308 Gene3D G3DSA:3.30.70.270 149 306 5.6E-49 T 22-04-2016 R615_RS10130 95e1dd3e1f02018c3009e7ddbcc7959a 308 PANTHER PTHR10799 106 307 5.6E-29 T 22-04-2016 R615_RS10130 95e1dd3e1f02018c3009e7ddbcc7959a 308 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 305 3.2E-45 T 22-04-2016 IPR000160 GGDEF domain R615_RS10130 95e1dd3e1f02018c3009e7ddbcc7959a 308 SUPERFAMILY SSF55073 152 307 6.04E-45 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS06555 93ac0d9ab42d96e8541279bdd4682610 179 Gene3D G3DSA:3.10.20.80 12 86 1.0E-27 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 R615_RS06555 93ac0d9ab42d96e8541279bdd4682610 179 SUPERFAMILY SSF55200 91 179 7.32E-33 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 R615_RS06555 93ac0d9ab42d96e8541279bdd4682610 179 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 175 4.0E-37 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 R615_RS06555 93ac0d9ab42d96e8541279bdd4682610 179 PANTHER PTHR10938 10 179 1.4E-60 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 R615_RS06555 93ac0d9ab42d96e8541279bdd4682610 179 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 5 178 28.146 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 R615_RS06555 93ac0d9ab42d96e8541279bdd4682610 179 Gene3D G3DSA:3.30.110.10 87 179 1.2E-39 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 R615_RS06555 93ac0d9ab42d96e8541279bdd4682610 179 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 16 84 1.0E-24 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 R615_RS06555 93ac0d9ab42d96e8541279bdd4682610 179 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 16 178 1.9E-60 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 R615_RS06555 93ac0d9ab42d96e8541279bdd4682610 179 SUPERFAMILY SSF54364 15 86 2.48E-22 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 PIRSF PIRSF000149 1 334 4.2E-125 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 SUPERFAMILY SSF51735 1 180 6.48E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 Gene3D G3DSA:3.30.360.10 165 319 1.1E-54 T 22-04-2016 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 SMART SM00846 3 156 2.3E-78 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 316 6.0E-46 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 233 250 1.0E-20 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 113 126 1.0E-20 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 1.0E-20 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 273 288 1.0E-20 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 1.0E-20 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 156 8.8E-52 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 PANTHER PTHR10836:SF47 1 332 3.9E-185 T 22-04-2016 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 SUPERFAMILY SSF55347 156 318 4.37E-53 T 22-04-2016 R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 Gene3D G3DSA:3.40.50.720 1 164 1.7E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS15100 1ef63b43d6489d37b1c2e21ff6a9ce62 335 PANTHER PTHR10836 1 332 3.9E-185 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS13275 d9c456f80541cd3f3b1365b0bc33bfc0 687 SUPERFAMILY SSF53474 516 578 1.24E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS13275 d9c456f80541cd3f3b1365b0bc33bfc0 687 SUPERFAMILY SSF53474 444 481 1.24E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS13275 d9c456f80541cd3f3b1365b0bc33bfc0 687 SUPERFAMILY SSF53474 300 390 1.24E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS13275 d9c456f80541cd3f3b1365b0bc33bfc0 687 Gene3D G3DSA:3.40.50.1820 442 497 2.6E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS13275 d9c456f80541cd3f3b1365b0bc33bfc0 687 Gene3D G3DSA:3.40.50.1820 300 388 2.6E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS13275 d9c456f80541cd3f3b1365b0bc33bfc0 687 Gene3D G3DSA:3.40.50.1820 530 579 2.6E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS11850 4a856ef6c47ee48862d046a89636ae07 458 SUPERFAMILY SSF102114 5 445 9.68E-132 T 22-04-2016 R615_RS11850 4a856ef6c47ee48862d046a89636ae07 458 Gene3D G3DSA:3.80.30.20 52 270 6.9E-27 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe R615_RS11850 4a856ef6c47ee48862d046a89636ae07 458 PIRSF PIRSF000167 5 458 1.4E-161 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 R615_RS11850 4a856ef6c47ee48862d046a89636ae07 458 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 7 458 1.6E-176 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 R615_RS11850 4a856ef6c47ee48862d046a89636ae07 458 Pfam PF04055 Radical SAM superfamily 57 230 6.2E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 R615_RS11850 4a856ef6c47ee48862d046a89636ae07 458 PANTHER PTHR13932:SF6 1 453 1.2E-212 T 22-04-2016 R615_RS11850 4a856ef6c47ee48862d046a89636ae07 458 Pfam PF06969 HemN C-terminal domain 367 433 2.2E-10 T 22-04-2016 IPR010723 HemN, C-terminal R615_RS11850 4a856ef6c47ee48862d046a89636ae07 458 PANTHER PTHR13932 1 453 1.2E-212 T 22-04-2016 R615_RS11850 4a856ef6c47ee48862d046a89636ae07 458 SMART SM00729 51 271 1.1E-45 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 R615_RS16460 db20b8ca07ab10e65bcca2dab365d504 388 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 12 379 3.4E-118 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 R615_RS16460 db20b8ca07ab10e65bcca2dab365d504 388 SUPERFAMILY SSF55031 182 297 4.49E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain R615_RS16460 db20b8ca07ab10e65bcca2dab365d504 388 Pfam PF01546 Peptidase family M20/M25/M40 78 380 9.2E-34 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 R615_RS16460 db20b8ca07ab10e65bcca2dab365d504 388 Pfam PF07687 Peptidase dimerisation domain 179 289 2.6E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain R615_RS16460 db20b8ca07ab10e65bcca2dab365d504 388 Gene3D G3DSA:3.40.630.10 324 383 9.5E-60 T 22-04-2016 R615_RS16460 db20b8ca07ab10e65bcca2dab365d504 388 Gene3D G3DSA:3.40.630.10 6 190 9.5E-60 T 22-04-2016 R615_RS16460 db20b8ca07ab10e65bcca2dab365d504 388 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 111 148 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 R615_RS16460 db20b8ca07ab10e65bcca2dab365d504 388 SUPERFAMILY SSF53187 306 383 6.57E-57 T 22-04-2016 R615_RS16460 db20b8ca07ab10e65bcca2dab365d504 388 SUPERFAMILY SSF53187 4 181 6.57E-57 T 22-04-2016 R615_RS16460 db20b8ca07ab10e65bcca2dab365d504 388 PANTHER PTHR11014 10 387 4.8E-156 T 22-04-2016 R615_RS16460 db20b8ca07ab10e65bcca2dab365d504 388 Gene3D G3DSA:3.30.70.360 191 292 1.2E-23 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain R615_RS16460 db20b8ca07ab10e65bcca2dab365d504 388 PANTHER PTHR11014:SF75 10 387 4.8E-156 T 22-04-2016 R615_RS14665 e8a042ffad4daa20b40a26afd1b84198 262 SUPERFAMILY SSF51197 16 261 1.65E-46 T 22-04-2016 R615_RS14665 e8a042ffad4daa20b40a26afd1b84198 262 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 26 259 1.9E-38 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 R615_RS14665 e8a042ffad4daa20b40a26afd1b84198 262 PANTHER PTHR10696 23 261 1.4E-29 T 22-04-2016 R615_RS14665 e8a042ffad4daa20b40a26afd1b84198 262 ProDom PD135861 METAL-BINDING IRON CSID GAB CYTOPLASMIC 3D-STRUCTURE HOMOLOG DIRECT SEQUENCING 89 255 3.0E-7 T 22-04-2016 IPR015038 Uncharacterised protein family CsiD GO:0005506 R615_RS14665 e8a042ffad4daa20b40a26afd1b84198 262 PANTHER PTHR10696:SF26 23 261 1.4E-29 T 22-04-2016 R615_RS14665 e8a042ffad4daa20b40a26afd1b84198 262 Gene3D G3DSA:3.60.130.10 4 261 2.4E-45 T 22-04-2016 R615_RS16205 9576f22c55a7bbf183cd98e25aaf892b 387 Pfam PF00561 alpha/beta hydrolase fold 51 359 2.7E-34 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS16205 9576f22c55a7bbf183cd98e25aaf892b 387 SUPERFAMILY SSF53474 16 374 3.43E-104 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS16205 9576f22c55a7bbf183cd98e25aaf892b 387 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 21 370 1.3E-141 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 R615_RS16205 9576f22c55a7bbf183cd98e25aaf892b 387 Gene3D G3DSA:3.40.50.1820 240 359 3.4E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS16205 9576f22c55a7bbf183cd98e25aaf892b 387 Gene3D G3DSA:3.40.50.1820 18 208 3.4E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS16205 9576f22c55a7bbf183cd98e25aaf892b 387 PANTHER PTHR32268 1 379 3.2E-180 T 22-04-2016 R615_RS16205 9576f22c55a7bbf183cd98e25aaf892b 387 PANTHER PTHR32268:SF11 1 379 3.2E-180 T 22-04-2016 R615_RS16205 9576f22c55a7bbf183cd98e25aaf892b 387 PIRSF PIRSF000443 4 382 3.6E-131 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 R615_RS16205 9576f22c55a7bbf183cd98e25aaf892b 387 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 8 375 48.38 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 SMART SM01003 4 137 2.6E-74 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 PIRSF PIRSF000183 1 370 3.6E-142 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 Gene3D G3DSA:3.40.50.720 170 303 3.9E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 PANTHER PTHR10160 1 362 2.1E-186 T 22-04-2016 R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 9.7E-77 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 SMART SM01002 149 297 2.2E-77 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 2.5E-46 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 SUPERFAMILY SSF51735 137 303 2.84E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 Gene3D G3DSA:3.40.50.1770 1 169 7.4E-60 T 22-04-2016 R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 SUPERFAMILY SSF52283 305 360 2.64E-64 T 22-04-2016 R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 SUPERFAMILY SSF52283 1 137 2.64E-64 T 22-04-2016 R615_RS09940 4f75e49756893c1564f5e3632d299c2e 373 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 365 3.9E-146 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 846 29.392 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 Gene3D G3DSA:3.30.1360.40 236 333 2.1E-38 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 SUPERFAMILY SSF56719 30 521 7.85E-181 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 SUPERFAMILY SSF101904 533 847 8.24E-106 T 22-04-2016 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 Gene3D G3DSA:1.10.268.10 363 496 2.5E-45 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 SMART SM00434 11 499 3.5E-289 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 689 1.5E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 745 789 2.2E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 794 840 1.2E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 540 585 1.1E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 738 5.8E-14 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 639 1.5E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 PANTHER PTHR10169 3 417 0.0 T 22-04-2016 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 PANTHER PTHR10169 450 813 0.0 T 22-04-2016 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 Gene3D G3DSA:3.90.199.10 34 216 3.2E-84 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 9.1E-151 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 PANTHER PTHR10169:SF48 3 417 0.0 T 22-04-2016 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 PANTHER PTHR10169:SF48 450 813 0.0 T 22-04-2016 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 Gene3D G3DSA:2.120.10.90 532 840 1.2E-133 T 22-04-2016 R615_RS06075 6c9bb4b9bd5235f4cb039c980ced487f 891 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 841 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 Pfam PF13620 Carboxypeptidase regulatory-like domain 28 104 5.3E-12 T 22-04-2016 R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 Gene3D G3DSA:2.60.40.1120 29 106 1.2E-12 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 Pfam PF07715 TonB-dependent Receptor Plug Domain 133 235 2.7E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 PANTHER PTHR30069:SF11 29 904 1.6E-48 T 22-04-2016 R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 Gene3D G3DSA:2.170.130.10 134 235 5.3E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 Pfam PF00593 TonB dependent receptor 640 908 6.7E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 SUPERFAMILY SSF49452 27 104 3.92E-10 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 PANTHER PTHR30069 29 904 1.6E-48 T 22-04-2016 R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 Gene3D G3DSA:2.40.170.20 570 908 1.7E-68 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 Gene3D G3DSA:2.40.170.20 236 527 1.7E-68 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 112 908 5.3E-175 T 22-04-2016 IPR010104 Bacterial TonB-dependent receptor R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 SUPERFAMILY SSF56935 102 520 1.03E-91 T 22-04-2016 R615_RS06285 b270c920cb26387d5c847c991ed6efd5 910 SUPERFAMILY SSF56935 548 908 1.03E-91 T 22-04-2016 R615_RS15045 5dc0d431d34dbc98a008c8269b80f01c 291 SUPERFAMILY SSF46785 1 83 1.62E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS15045 5dc0d431d34dbc98a008c8269b80f01c 291 PANTHER PTHR30126:SF14 1 287 3.5E-107 T 22-04-2016 R615_RS15045 5dc0d431d34dbc98a008c8269b80f01c 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.4E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS15045 5dc0d431d34dbc98a008c8269b80f01c 291 Pfam PF03466 LysR substrate binding domain 90 289 8.1E-38 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS15045 5dc0d431d34dbc98a008c8269b80f01c 291 SUPERFAMILY SSF53850 88 289 8.31E-35 T 22-04-2016 R615_RS15045 5dc0d431d34dbc98a008c8269b80f01c 291 PANTHER PTHR30126 1 287 3.5E-107 T 22-04-2016 R615_RS15045 5dc0d431d34dbc98a008c8269b80f01c 291 Gene3D G3DSA:3.40.190.10 199 261 8.9E-13 T 22-04-2016 R615_RS15045 5dc0d431d34dbc98a008c8269b80f01c 291 Gene3D G3DSA:1.10.10.10 1 80 2.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS15045 5dc0d431d34dbc98a008c8269b80f01c 291 Gene3D G3DSA:3.40.190.10 81 198 8.6E-20 T 22-04-2016 R615_RS16505 1c2e8da9d8465de57e12993eedc6c290 162 PRINTS PR00070 Dihydrofolate reductase signature 36 47 1.5E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 R615_RS16505 1c2e8da9d8465de57e12993eedc6c290 162 PRINTS PR00070 Dihydrofolate reductase signature 9 19 1.5E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 R615_RS16505 1c2e8da9d8465de57e12993eedc6c290 162 PRINTS PR00070 Dihydrofolate reductase signature 23 31 1.5E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 R615_RS16505 1c2e8da9d8465de57e12993eedc6c290 162 PRINTS PR00070 Dihydrofolate reductase signature 93 107 1.5E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 R615_RS16505 1c2e8da9d8465de57e12993eedc6c290 162 PANTHER PTHR22778:SF16 1 160 3.4E-43 T 22-04-2016 R615_RS16505 1c2e8da9d8465de57e12993eedc6c290 162 SUPERFAMILY SSF53597 1 160 3.93E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain R615_RS16505 1c2e8da9d8465de57e12993eedc6c290 162 Gene3D G3DSA:3.40.430.10 1 160 5.6E-60 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain R615_RS16505 1c2e8da9d8465de57e12993eedc6c290 162 PANTHER PTHR22778 1 160 3.4E-43 T 22-04-2016 R615_RS16505 1c2e8da9d8465de57e12993eedc6c290 162 PIRSF PIRSF000194 1 162 1.9E-63 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 R615_RS16505 1c2e8da9d8465de57e12993eedc6c290 162 Pfam PF00186 Dihydrofolate reductase 2 160 3.5E-60 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 R615_RS16505 1c2e8da9d8465de57e12993eedc6c290 162 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 9 31 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 PIRSF PIRSF006107 1 705 0.0 T 22-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 PANTHER PTHR23406:SF3 170 705 2.0E-49 T 22-04-2016 R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 Gene3D G3DSA:3.40.1390.20 218 357 3.7E-30 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 Pfam PF01515 Phosphate acetyl/butaryl transferase 382 697 6.1E-119 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 Pfam PF07085 DRTGG domain 225 336 8.7E-30 T 22-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 SUPERFAMILY SSF53659 383 701 1.32E-87 T 22-04-2016 R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 SUPERFAMILY SSF75138 221 344 1.79E-25 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 SUPERFAMILY SSF52540 1 231 3.8E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 Pfam PF13500 AAA domain 4 221 2.3E-31 T 22-04-2016 R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 PANTHER PTHR23406 170 705 2.0E-49 T 22-04-2016 R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 Gene3D G3DSA:3.40.50.300 3 217 1.6E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 397 697 3.5E-124 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 R615_RS11900 5e4c9853cbd59776b65fe629a638b72a 706 Gene3D G3DSA:3.40.50.10750 514 673 1.7E-63 T 22-04-2016 R615_RS15140 cb0c291793bf5bf120460b5bd654a70e 443 Gene3D G3DSA:2.30.40.10 362 435 1.7E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS15140 cb0c291793bf5bf120460b5bd654a70e 443 Pfam PF01979 Amidohydrolase family 71 430 6.3E-64 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 R615_RS15140 cb0c291793bf5bf120460b5bd654a70e 443 Gene3D G3DSA:3.20.20.140 75 361 1.1E-109 T 22-04-2016 R615_RS15140 cb0c291793bf5bf120460b5bd654a70e 443 SUPERFAMILY SSF51338 30 90 3.14E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS15140 cb0c291793bf5bf120460b5bd654a70e 443 PANTHER PTHR11271 31 440 7.7E-152 T 22-04-2016 R615_RS15140 cb0c291793bf5bf120460b5bd654a70e 443 SUPERFAMILY SSF51556 74 376 1.24E-94 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS15140 cb0c291793bf5bf120460b5bd654a70e 443 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 30 429 4.2E-177 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 R615_RS15140 cb0c291793bf5bf120460b5bd654a70e 443 PANTHER PTHR11271:SF6 31 440 7.7E-152 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 R615_RS17280 56063afa86b5c083693178d635d40e89 289 Pfam PF13411 MerR HTH family regulatory protein 10 77 8.4E-20 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS17280 56063afa86b5c083693178d635d40e89 289 SUPERFAMILY SSF46955 10 85 2.7E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain R615_RS17280 56063afa86b5c083693178d635d40e89 289 PANTHER PTHR30204 2 138 1.1E-34 T 22-04-2016 R615_RS17280 56063afa86b5c083693178d635d40e89 289 Gene3D G3DSA:1.10.1660.10 10 98 1.3E-18 T 22-04-2016 R615_RS17280 56063afa86b5c083693178d635d40e89 289 PANTHER PTHR30204:SF19 2 138 1.1E-34 T 22-04-2016 R615_RS17280 56063afa86b5c083693178d635d40e89 289 SMART SM00422 10 79 5.1E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 SMART SM00863 651 696 2.8E-18 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 Pfam PF02272 DHHA1 domain 801 868 3.2E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 Pfam PF01411 tRNA synthetases class II (A) 5 553 5.5E-222 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 SUPERFAMILY SSF55186 550 711 3.27E-49 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 PANTHER PTHR11777:SF9 1 875 0.0 T 22-04-2016 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 Gene3D G3DSA:3.30.930.10 1 250 1.4E-124 T 22-04-2016 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 SUPERFAMILY SSF101353 254 446 8.63E-62 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 SUPERFAMILY SSF55681 2 253 1.79E-106 T 22-04-2016 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 SUPERFAMILY SSF50447 452 550 6.71E-17 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 696 1.7E-16 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 PANTHER PTHR11777 1 875 0.0 T 22-04-2016 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 854 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 202.187 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 3.0E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 3.0E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 3.0E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 3.0E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 R615_RS14345 23ae910ccf0f6f2ba2616efd830babdf 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 3.0E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 R615_RS12385 68de12d3304a2489d1bfc50b5a4e48da 265 SMART SM00028 144 177 0.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12385 68de12d3304a2489d1bfc50b5a4e48da 265 SMART SM00028 178 211 500.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12385 68de12d3304a2489d1bfc50b5a4e48da 265 SMART SM00028 40 73 0.078 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12385 68de12d3304a2489d1bfc50b5a4e48da 265 SMART SM00028 74 107 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12385 68de12d3304a2489d1bfc50b5a4e48da 265 SMART SM00028 108 141 360.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12385 68de12d3304a2489d1bfc50b5a4e48da 265 Gene3D G3DSA:1.25.40.10 40 207 2.6E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS12385 68de12d3304a2489d1bfc50b5a4e48da 265 Pfam PF13181 Tetratricopeptide repeat 111 134 0.0029 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12385 68de12d3304a2489d1bfc50b5a4e48da 265 SUPERFAMILY SSF81901 43 246 2.88E-22 T 22-04-2016 R615_RS12385 68de12d3304a2489d1bfc50b5a4e48da 265 Pfam PF13432 Tetratricopeptide repeat 149 203 9.3E-4 T 22-04-2016 R615_RS12385 68de12d3304a2489d1bfc50b5a4e48da 265 Pfam PF13432 Tetratricopeptide repeat 46 101 0.0016 T 22-04-2016 R615_RS12385 68de12d3304a2489d1bfc50b5a4e48da 265 PANTHER PTHR23083 40 215 6.6E-26 T 22-04-2016 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 Pfam PF06827 Zinc finger found in FPG and IleRS 925 952 6.2E-8 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 SUPERFAMILY SSF50677 209 433 3.87E-37 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 Gene3D G3DSA:3.40.50.620 433 666 9.7E-135 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 Gene3D G3DSA:3.40.50.620 22 210 9.7E-135 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 19 871 5.2E-269 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 33 671 1.5E-205 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 PANTHER PTHR11946:SF11 11 220 0.0 T 22-04-2016 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 PANTHER PTHR11946:SF11 291 931 0.0 T 22-04-2016 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 PANTHER PTHR11946:SF11 241 266 0.0 T 22-04-2016 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 Gene3D G3DSA:3.90.740.10 211 419 6.0E-42 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 PANTHER PTHR11946 11 220 0.0 T 22-04-2016 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 PANTHER PTHR11946 291 931 0.0 T 22-04-2016 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 PANTHER PTHR11946 241 266 0.0 T 22-04-2016 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 Gene3D G3DSA:1.10.730.10 674 856 7.0E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 Pfam PF08264 Anticodon-binding domain of tRNA 715 869 6.0E-24 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 SUPERFAMILY SSF47323 682 955 2.43E-75 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 7 955 20.927 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 591 600 5.0E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 431 446 5.0E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 245 268 5.0E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 56 67 5.0E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 557 570 5.0E-33 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 SUPERFAMILY SSF52374 9 207 2.93E-136 T 22-04-2016 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 SUPERFAMILY SSF52374 433 675 2.93E-136 T 22-04-2016 R615_RS03220 fe2fb716d1be61b27c897499772ff35d 964 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 63 74 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 SUPERFAMILY SSF51735 11 255 7.28E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PANTHER PTHR24322:SF409 161 193 1.3E-62 T 22-04-2016 R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PANTHER PTHR24322:SF409 16 145 1.3E-62 T 22-04-2016 R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PANTHER PTHR24322 161 193 1.3E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PANTHER PTHR24322 16 145 1.3E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.7E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.7E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.7E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 Gene3D G3DSA:3.40.50.720 5 255 3.0E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 5.5E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 5.5E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 5.5E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 5.5E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 5.5E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 5.5E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00220 8b2a6e644e7167d62b356e7c16e3ec9f 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 4.6E-62 T 22-04-2016 R615_RS14555 9ff212acc2d80296f56bbb54166e9a02 209 Gene3D G3DSA:1.10.357.10 4 175 1.4E-21 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS14555 9ff212acc2d80296f56bbb54166e9a02 209 SUPERFAMILY SSF46689 3 74 1.13E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS14555 9ff212acc2d80296f56bbb54166e9a02 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 56 1.7E-4 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS14555 9ff212acc2d80296f56bbb54166e9a02 209 PANTHER PTHR30055 2 197 8.1E-16 T 22-04-2016 R615_RS07665 34253532c1b0d2d2c8587e266d0fe6a7 489 PANTHER PTHR11609 159 475 1.7E-97 T 22-04-2016 R615_RS07665 34253532c1b0d2d2c8587e266d0fe6a7 489 SUPERFAMILY SSF56059 273 479 1.7E-37 T 22-04-2016 R615_RS07665 34253532c1b0d2d2c8587e266d0fe6a7 489 Pfam PF08443 RimK-like ATP-grasp domain 281 459 7.2E-15 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type R615_RS07665 34253532c1b0d2d2c8587e266d0fe6a7 489 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 172 9.2E-40 T 22-04-2016 IPR025839 RimK-like ATPgrasp N-terminal domain R615_RS07665 34253532c1b0d2d2c8587e266d0fe6a7 489 Gene3D G3DSA:3.40.50.20 234 286 1.2E-6 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS07665 34253532c1b0d2d2c8587e266d0fe6a7 489 Gene3D G3DSA:3.30.470.20 360 457 7.6E-6 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS07665 34253532c1b0d2d2c8587e266d0fe6a7 489 PANTHER PTHR11609:SF4 159 475 1.7E-97 T 22-04-2016 R615_RS07665 34253532c1b0d2d2c8587e266d0fe6a7 489 Gene3D G3DSA:3.30.1490.20 287 359 1.8E-10 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 SUPERFAMILY SSF55874 591 760 1.96E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 705 715 1.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 687 701 1.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 746 759 1.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 PRINTS PR00344 Bacterial sensor protein C-terminal signature 722 740 1.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 SUPERFAMILY SSF47384 522 603 1.88E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 Gene3D G3DSA:3.30.565.10 591 761 3.0E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 Gene3D G3DSA:1.10.287.130 529 590 9.7E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 649 761 3.2E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 Pfam PF00072 Response regulator receiver domain 810 922 4.3E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 Pfam PF00512 His Kinase A (phospho-acceptor) domain 537 602 3.9E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 SMART SM01079 254 444 3.1E-46 T 22-04-2016 IPR006189 CHASE domain R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 SMART SM00388 537 602 8.4E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 Pfam PF03924 CHASE domain 258 442 5.1E-39 T 22-04-2016 IPR006189 CHASE domain R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 PANTHER PTHR24423:SF486 516 922 3.7E-141 T 22-04-2016 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 SMART SM00448 808 922 4.0E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 SMART SM00387 649 762 6.0E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 Pfam PF05231 MASE1 9 190 2.0E-21 T 22-04-2016 IPR007895 MASE1 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 PANTHER PTHR24423 516 922 3.7E-141 T 22-04-2016 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 Gene3D G3DSA:3.40.50.2300 805 924 9.5E-37 T 22-04-2016 R615_RS00450 2a4d5296d5508a6d8e68ad374f7aa660 926 SUPERFAMILY SSF52172 805 924 5.69E-34 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS09900 bb26ff9e53d897de813543534fae169f 1153 SUPERFAMILY SSF52980 824 1126 4.24E-42 T 22-04-2016 IPR011335 Restriction endonuclease type II-like R615_RS09900 bb26ff9e53d897de813543534fae169f 1153 Gene3D G3DSA:1.10.10.160 85 182 1.5E-31 T 22-04-2016 IPR013986 DExx box DNA helicase domain R615_RS09900 bb26ff9e53d897de813543534fae169f 1153 Gene3D G3DSA:3.40.50.300 357 443 3.7E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09900 bb26ff9e53d897de813543534fae169f 1153 Gene3D G3DSA:3.40.50.300 651 748 3.7E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09900 bb26ff9e53d897de813543534fae169f 1153 PANTHER PTHR30591:SF1 1 1101 6.5E-232 T 22-04-2016 R615_RS09900 bb26ff9e53d897de813543534fae169f 1153 SUPERFAMILY SSF52540 356 796 1.59E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09900 bb26ff9e53d897de813543534fae169f 1153 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 793 1.7E-279 T 22-04-2016 R615_RS09900 bb26ff9e53d897de813543534fae169f 1153 SUPERFAMILY SSF52540 1 333 5.84E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09900 bb26ff9e53d897de813543534fae169f 1153 PANTHER PTHR30591 1 1101 6.5E-232 T 22-04-2016 R615_RS09900 bb26ff9e53d897de813543534fae169f 1153 PIRSF PIRSF000980 1 1135 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 R615_RS09900 bb26ff9e53d897de813543534fae169f 1153 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1074 6.2E-298 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 R615_RS09900 bb26ff9e53d897de813543534fae169f 1153 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1139 12.275 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 R615_RS11050 ab72227f86aaf7b4badd03e9b861c7db 159 Gene3D G3DSA:3.30.530.20 10 157 4.2E-52 T 22-04-2016 IPR023393 START-like domain R615_RS11050 ab72227f86aaf7b4badd03e9b861c7db 159 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 20 155 4.1E-35 T 22-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 R615_RS11050 ab72227f86aaf7b4badd03e9b861c7db 159 PANTHER PTHR36929:SF1 8 159 2.0E-32 T 22-04-2016 R615_RS11050 ab72227f86aaf7b4badd03e9b861c7db 159 SUPERFAMILY SSF55961 11 158 3.59E-48 T 22-04-2016 R615_RS11050 ab72227f86aaf7b4badd03e9b861c7db 159 PANTHER PTHR36929 8 159 2.0E-32 T 22-04-2016 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 PANTHER PTHR30161:SF1 4 335 0.0 T 22-04-2016 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 PANTHER PTHR30161:SF1 361 733 0.0 T 22-04-2016 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 PANTHER PTHR30161 4 335 0.0 T 22-04-2016 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 PANTHER PTHR30161 361 733 0.0 T 22-04-2016 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 Pfam PF00771 FHIPEP family 35 721 3.3E-264 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 24 730 2.3E-257 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 PIRSF PIRSF005419 7 734 2.6E-240 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 145 161 1.8E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 245 259 1.8E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 194 211 1.8E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 78 97 1.8E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 41 54 1.8E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 R615_RS05095 27af9a790a514a141c2a118603dffd90 734 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 164 182 1.8E-55 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 R615_RS01620 927273061c3860211c91fc8ccc6521e7 612 SUPERFAMILY SSF143975 4 418 5.75E-136 T 22-04-2016 R615_RS01620 927273061c3860211c91fc8ccc6521e7 612 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS01620 927273061c3860211c91fc8ccc6521e7 612 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS01620 927273061c3860211c91fc8ccc6521e7 612 Pfam PF00920 Dehydratase family 34 603 7.2E-216 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS01620 927273061c3860211c91fc8ccc6521e7 612 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 2.9E-251 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS01620 927273061c3860211c91fc8ccc6521e7 612 PANTHER PTHR21000:SF11 1 369 0.0 T 22-04-2016 R615_RS01620 927273061c3860211c91fc8ccc6521e7 612 PANTHER PTHR21000:SF11 404 612 0.0 T 22-04-2016 R615_RS01620 927273061c3860211c91fc8ccc6521e7 612 SUPERFAMILY SSF52016 419 607 2.9E-58 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel R615_RS01620 927273061c3860211c91fc8ccc6521e7 612 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.403 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS01620 927273061c3860211c91fc8ccc6521e7 612 PANTHER PTHR21000 1 369 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS01620 927273061c3860211c91fc8ccc6521e7 612 PANTHER PTHR21000 404 612 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 PANTHER PTHR24422 1 269 3.4E-91 T 22-04-2016 R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 SMART SM00138 3 266 1.7E-83 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 Pfam PF03705 CheR methyltransferase, all-alpha domain 4 51 1.1E-6 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 SUPERFAMILY SSF47757 1 68 2.09E-10 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 PRINTS PR00996 Glutamate methyltransferase family signature 206 220 2.8E-41 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 PRINTS PR00996 Glutamate methyltransferase family signature 62 74 2.8E-41 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 PRINTS PR00996 Glutamate methyltransferase family signature 25 38 2.8E-41 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 PRINTS PR00996 Glutamate methyltransferase family signature 137 153 2.8E-41 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 PRINTS PR00996 Glutamate methyltransferase family signature 99 119 2.8E-41 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 PRINTS PR00996 Glutamate methyltransferase family signature 225 248 2.8E-41 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 Gene3D G3DSA:3.40.50.150 68 261 2.2E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 Gene3D G3DSA:1.10.155.10 1 67 1.9E-9 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 SUPERFAMILY SSF53335 69 263 1.08E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 Pfam PF01739 CheR methyltransferase, SAM binding domain 69 262 3.0E-59 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal R615_RS04610 c0a601b05768b6a51ad4b3adfa8feeee 272 PANTHER PTHR24422:SF9 1 269 3.4E-91 T 22-04-2016 R615_RS14560 8e21ed0bb9ced5dafaa77ca0d7fc64b2 537 SUPERFAMILY SSF51905 480 529 3.46E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14560 8e21ed0bb9ced5dafaa77ca0d7fc64b2 537 SUPERFAMILY SSF51905 101 287 3.46E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14560 8e21ed0bb9ced5dafaa77ca0d7fc64b2 537 PANTHER PTHR10617 471 535 2.5E-164 T 22-04-2016 R615_RS14560 8e21ed0bb9ced5dafaa77ca0d7fc64b2 537 PANTHER PTHR10617 76 391 2.5E-164 T 22-04-2016 R615_RS14560 8e21ed0bb9ced5dafaa77ca0d7fc64b2 537 PIRSF PIRSF038984 1 535 1.4E-237 T 22-04-2016 IPR028348 FAD dependent protein R615_RS14560 8e21ed0bb9ced5dafaa77ca0d7fc64b2 537 Gene3D G3DSA:3.50.50.60 101 289 2.0E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14560 8e21ed0bb9ced5dafaa77ca0d7fc64b2 537 Gene3D G3DSA:3.50.50.60 464 530 2.0E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14560 8e21ed0bb9ced5dafaa77ca0d7fc64b2 537 PANTHER PTHR10617:SF52 471 535 2.5E-164 T 22-04-2016 R615_RS14560 8e21ed0bb9ced5dafaa77ca0d7fc64b2 537 PANTHER PTHR10617:SF52 76 391 2.5E-164 T 22-04-2016 R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 Gene3D G3DSA:1.10.10.10 2 88 1.4E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 Pfam PF03466 LysR substrate binding domain 107 298 5.8E-24 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 SUPERFAMILY SSF53850 93 300 2.29E-43 T 22-04-2016 R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 Gene3D G3DSA:3.40.190.10 182 271 2.1E-28 T 22-04-2016 R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.4E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.4E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.4E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 Gene3D G3DSA:3.40.190.10 93 181 6.7E-24 T 22-04-2016 R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 Gene3D G3DSA:3.40.190.10 288 301 6.7E-24 T 22-04-2016 R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 PANTHER PTHR30118 1 300 1.6E-112 T 22-04-2016 R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 SUPERFAMILY SSF46785 6 87 1.43E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 PANTHER PTHR30118:SF4 1 300 1.6E-112 T 22-04-2016 R615_RS16930 0e96a27a246426a89a25f42447e15e41 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 5.6E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS10140 8de1af8f79bab6f835b9ae98597a1386 469 SUPERFAMILY SSF52467 294 468 2.56E-69 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain R615_RS10140 8de1af8f79bab6f835b9ae98597a1386 469 PANTHER PTHR10160:SF24 1 469 4.0E-212 T 22-04-2016 R615_RS10140 8de1af8f79bab6f835b9ae98597a1386 469 Pfam PF02233 NAD(P) transhydrogenase beta subunit 6 463 9.8E-175 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 R615_RS10140 8de1af8f79bab6f835b9ae98597a1386 469 Gene3D G3DSA:3.40.50.1220 292 468 1.6E-81 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain R615_RS10140 8de1af8f79bab6f835b9ae98597a1386 469 PIRSF PIRSF000204 1 468 2.9E-176 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 R615_RS10140 8de1af8f79bab6f835b9ae98597a1386 469 PANTHER PTHR10160 1 469 4.0E-212 T 22-04-2016 R615_RS03535 61b5c8377b1fb7dbc722192feb0feb48 417 PIRSF PIRSF003085 18 415 2.6E-121 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 R615_RS03535 61b5c8377b1fb7dbc722192feb0feb48 417 Gene3D G3DSA:3.40.50.150 127 404 1.3E-99 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03535 61b5c8377b1fb7dbc722192feb0feb48 417 PANTHER PTHR10108 61 319 3.7E-119 T 22-04-2016 R615_RS03535 61b5c8377b1fb7dbc722192feb0feb48 417 PANTHER PTHR10108 340 408 3.7E-119 T 22-04-2016 R615_RS03535 61b5c8377b1fb7dbc722192feb0feb48 417 Pfam PF02353 Mycolic acid cyclopropane synthetase 132 396 7.5E-83 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03535 61b5c8377b1fb7dbc722192feb0feb48 417 PANTHER PTHR10108:SF795 61 319 3.7E-119 T 22-04-2016 R615_RS03535 61b5c8377b1fb7dbc722192feb0feb48 417 PANTHER PTHR10108:SF795 340 408 3.7E-119 T 22-04-2016 R615_RS03535 61b5c8377b1fb7dbc722192feb0feb48 417 SUPERFAMILY SSF53335 19 359 6.82E-89 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 Gene3D G3DSA:3.65.10.10 535 735 1.1E-49 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 314 737 32.498 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 SUPERFAMILY SSF55205 309 735 5.07E-125 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 Pfam PF02153 Prephenate dehydrogenase 25 274 2.7E-71 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 SUPERFAMILY SSF51735 9 176 1.35E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 PANTHER PTHR21090:SF5 4 743 3.7E-161 T 22-04-2016 R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 SUPERFAMILY SSF48179 182 288 3.74E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 318 733 3.1E-120 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 ProSitePatterns PS00104 EPSP synthase signature 1. 393 407 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 Gene3D G3DSA:3.65.10.10 326 534 6.9E-59 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 Gene3D G3DSA:3.40.50.720 6 186 3.2E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 ProSitePatterns PS00885 EPSP synthase signature 2. 645 663 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 PANTHER PTHR21090 4 743 3.7E-161 T 22-04-2016 R615_RS06100 8e58fc75b2369ffafda2a7ee3cffb5bb 747 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 311 729 2.6E-114 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 R615_RS05020 c2d627e6f95d33bc6812e750fa85d708 217 PANTHER PTHR35147 6 217 2.2E-75 T 22-04-2016 R615_RS05020 c2d627e6f95d33bc6812e750fa85d708 217 PANTHER PTHR35147:SF2 6 217 2.2E-75 T 22-04-2016 R615_RS05020 c2d627e6f95d33bc6812e750fa85d708 217 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 26 185 27.638 T 22-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 R615_RS05020 c2d627e6f95d33bc6812e750fa85d708 217 Pfam PF03975 CheD chemotactic sensory transduction 74 181 1.3E-30 T 22-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 R615_RS05020 c2d627e6f95d33bc6812e750fa85d708 217 SUPERFAMILY SSF64438 33 186 3.2E-47 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic R615_RS00315 73538ba4b0c965f30663de959be14c6f 283 Pfam PF03994 Domain of Unknown Function (DUF350) 85 140 4.1E-8 T 22-04-2016 IPR007140 Protein of unknown function DUF350 R615_RS03590 b43d31eae13402bcc89ad9a725819fd0 589 PANTHER PTHR10909 3 471 3.0E-212 T 22-04-2016 R615_RS03590 b43d31eae13402bcc89ad9a725819fd0 589 Gene3D G3DSA:1.20.140.10 265 453 1.2E-51 T 22-04-2016 R615_RS03590 b43d31eae13402bcc89ad9a725819fd0 589 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 278 447 5.4E-22 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS03590 b43d31eae13402bcc89ad9a725819fd0 589 SUPERFAMILY SSF47203 283 470 2.58E-44 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS03590 b43d31eae13402bcc89ad9a725819fd0 589 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 585 8.0E-34 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain R615_RS03590 b43d31eae13402bcc89ad9a725819fd0 589 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 47 159 1.1E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS03590 b43d31eae13402bcc89ad9a725819fd0 589 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 2 34 1.8E-15 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria R615_RS03590 b43d31eae13402bcc89ad9a725819fd0 589 Gene3D G3DSA:2.40.110.10 162 264 5.2E-26 T 22-04-2016 R615_RS03590 b43d31eae13402bcc89ad9a725819fd0 589 Gene3D G3DSA:1.10.540.10 41 161 2.0E-21 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS03590 b43d31eae13402bcc89ad9a725819fd0 589 PANTHER PTHR10909:SF296 3 471 3.0E-212 T 22-04-2016 R615_RS03590 b43d31eae13402bcc89ad9a725819fd0 589 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 268 5.5E-18 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 R615_RS03590 b43d31eae13402bcc89ad9a725819fd0 589 SUPERFAMILY SSF56645 39 276 3.8E-60 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 R615_RS00425 8eb50e76c019a59f3eb333ad7e3305e0 285 SUPERFAMILY SSF56112 27 236 1.12E-33 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS00425 8eb50e76c019a59f3eb333ad7e3305e0 285 Gene3D G3DSA:3.30.200.20 25 92 5.0E-4 T 22-04-2016 R615_RS00425 8eb50e76c019a59f3eb333ad7e3305e0 285 Gene3D G3DSA:3.90.1200.10 104 236 5.0E-15 T 22-04-2016 R615_RS00425 8eb50e76c019a59f3eb333ad7e3305e0 285 Pfam PF01636 Phosphotransferase enzyme family 33 226 4.9E-25 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 Gene3D G3DSA:3.30.1160.10 81 146 9.1E-37 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 SUPERFAMILY SSF47413 3 76 1.42E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 SMART SM01116 74 146 9.2E-50 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 PANTHER PTHR34186:SF2 6 146 1.1E-54 T 22-04-2016 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 SUPERFAMILY SSF55234 79 146 2.09E-30 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 PRINTS PR01693 Cyanase signature 131 141 9.4E-29 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 PRINTS PR01693 Cyanase signature 14 29 9.4E-29 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 PRINTS PR01693 Cyanase signature 100 116 9.4E-29 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 PRINTS PR01693 Cyanase signature 82 96 9.4E-29 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 PRINTS PR01693 Cyanase signature 34 51 9.4E-29 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 PANTHER PTHR34186 6 146 1.1E-54 T 22-04-2016 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 Pfam PF02560 Cyanate lyase C-terminal domain 78 144 9.5E-37 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 TIGRFAM TIGR00673 cynS: cyanase 5 146 4.9E-52 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 PIRSF PIRSF001263 1 146 2.5E-53 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 Hamap MF_00535 Cyanate hydratase [cynS]. 1 146 70.115 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 R615_RS16925 e4ddf887edbc25e09272f2fc0220b0e0 146 Gene3D G3DSA:1.10.260.40 3 80 1.6E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 SUPERFAMILY SSF51905 557 658 7.2E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 SUPERFAMILY SSF51905 463 521 7.2E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 SUPERFAMILY SSF51395 4 362 9.02E-111 T 22-04-2016 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 PANTHER PTHR22893:SF56 4 418 1.7E-240 T 22-04-2016 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 331 1.7E-77 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 634 2.4E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 SUPERFAMILY SSF51971 334 526 1.18E-42 T 22-04-2016 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 Gene3D G3DSA:3.50.50.60 472 630 2.2E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 Gene3D G3DSA:3.50.50.60 361 466 9.3E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 PANTHER PTHR22893 4 418 1.7E-240 T 22-04-2016 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 500 518 5.9E-13 T 22-04-2016 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 5.9E-13 T 22-04-2016 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 460 478 5.9E-13 T 22-04-2016 R615_RS10220 55f642791e9f8be5aeb43cbb55117577 680 Gene3D G3DSA:3.20.20.70 4 360 1.0E-120 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS07760 850c55800f13ee46328732bd8160de41 384 PANTHER PTHR13504 3 377 2.4E-101 T 22-04-2016 R615_RS07760 850c55800f13ee46328732bd8160de41 384 Pfam PF02661 Fic/DOC family 113 227 2.7E-19 T 22-04-2016 IPR003812 Fido domain R615_RS07760 850c55800f13ee46328732bd8160de41 384 PANTHER PTHR13504:SF33 3 377 2.4E-101 T 22-04-2016 R615_RS07760 850c55800f13ee46328732bd8160de41 384 Gene3D G3DSA:1.10.3290.10 33 308 2.7E-55 T 22-04-2016 IPR003812 Fido domain R615_RS07760 850c55800f13ee46328732bd8160de41 384 SUPERFAMILY SSF140931 102 305 3.01E-32 T 22-04-2016 IPR003812 Fido domain R615_RS07760 850c55800f13ee46328732bd8160de41 384 Pfam PF13776 Domain of unknown function (DUF4172) 3 84 8.2E-25 T 22-04-2016 IPR025230 Domain of unknown function DUF4172 R615_RS12000 9fd858078adc2f7f4ca2786144945505 484 Gene3D G3DSA:3.50.50.60 3 212 6.7E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12000 9fd858078adc2f7f4ca2786144945505 484 Gene3D G3DSA:3.50.50.60 292 481 9.9E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12000 9fd858078adc2f7f4ca2786144945505 484 SUPERFAMILY SSF51905 2 249 6.6E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12000 9fd858078adc2f7f4ca2786144945505 484 Pfam PF00743 Flavin-binding monooxygenase-like 8 338 5.1E-21 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 R615_RS12000 9fd858078adc2f7f4ca2786144945505 484 SUPERFAMILY SSF51905 260 481 4.4E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12000 9fd858078adc2f7f4ca2786144945505 484 PANTHER PTHR23023:SF132 1 480 1.4E-197 T 22-04-2016 R615_RS12000 9fd858078adc2f7f4ca2786144945505 484 PANTHER PTHR23023 1 480 1.4E-197 T 22-04-2016 R615_RS12000 9fd858078adc2f7f4ca2786144945505 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 4.5E-8 T 22-04-2016 R615_RS12000 9fd858078adc2f7f4ca2786144945505 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 130 139 4.5E-8 T 22-04-2016 R615_RS12000 9fd858078adc2f7f4ca2786144945505 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.5E-8 T 22-04-2016 R615_RS02035 efda9ed8fd8d588bbc0e727ad25541b9 483 SMART SM00316 37 111 1.1E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS02035 efda9ed8fd8d588bbc0e727ad25541b9 483 SUPERFAMILY SSF50249 39 116 1.71E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS02035 efda9ed8fd8d588bbc0e727ad25541b9 483 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 420 2.6E-155 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 R615_RS02035 efda9ed8fd8d588bbc0e727ad25541b9 483 PANTHER PTHR30001 1 482 2.5E-199 T 22-04-2016 R615_RS02035 efda9ed8fd8d588bbc0e727ad25541b9 483 Gene3D G3DSA:2.40.50.140 30 117 4.3E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS02035 efda9ed8fd8d588bbc0e727ad25541b9 483 Pfam PF00575 S1 RNA binding domain 38 98 2.4E-5 T 22-04-2016 IPR003029 S1 domain GO:0003676 R615_RS02035 efda9ed8fd8d588bbc0e727ad25541b9 483 Pfam PF10150 Ribonuclease E/G family 114 387 5.1E-102 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 R615_RS09260 519556db3e7ab7c7b9e569c44825c6a1 244 PRINTS PR01805 VacJ lipoprotein signature 101 118 4.6E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 R615_RS09260 519556db3e7ab7c7b9e569c44825c6a1 244 PRINTS PR01805 VacJ lipoprotein signature 137 154 4.6E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 R615_RS09260 519556db3e7ab7c7b9e569c44825c6a1 244 PRINTS PR01805 VacJ lipoprotein signature 50 66 4.6E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 R615_RS09260 519556db3e7ab7c7b9e569c44825c6a1 244 PRINTS PR01805 VacJ lipoprotein signature 33 46 4.6E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 R615_RS09260 519556db3e7ab7c7b9e569c44825c6a1 244 Pfam PF04333 MlaA lipoprotein 32 223 1.7E-71 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 R615_RS09260 519556db3e7ab7c7b9e569c44825c6a1 244 PANTHER PTHR30035 1 237 2.0E-66 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 R615_RS09260 519556db3e7ab7c7b9e569c44825c6a1 244 PANTHER PTHR30035:SF3 1 237 2.0E-66 T 22-04-2016 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 PRINTS PR00702 Acriflavin resistance protein family signature 324 347 1.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 1.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 1.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 1.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 SUPERFAMILY SSF82714 185 258 7.19E-7 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 SUPERFAMILY SSF82866 801 1032 4.84E-40 T 22-04-2016 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 PANTHER PTHR32063 1 1028 1.3E-288 T 22-04-2016 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 Gene3D G3DSA:3.30.2090.10 713 793 5.0E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 SUPERFAMILY SSF82866 288 484 1.96E-39 T 22-04-2016 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 SUPERFAMILY SSF82693 266 322 7.67E-18 T 22-04-2016 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 SUPERFAMILY SSF82693 139 180 7.67E-18 T 22-04-2016 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 Gene3D G3DSA:1.20.1640.10 283 493 2.1E-48 T 22-04-2016 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 SUPERFAMILY SSF82714 713 793 3.14E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 SUPERFAMILY SSF82693 41 133 1.15E-20 T 22-04-2016 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 Gene3D G3DSA:1.10.3850.10 803 1032 3.2E-48 T 22-04-2016 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 Gene3D G3DSA:3.30.70.1430 41 141 9.9E-24 T 22-04-2016 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 Gene3D G3DSA:3.30.2090.10 185 262 3.2E-6 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 Pfam PF00873 AcrB/AcrD/AcrF family 5 1029 6.8E-170 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS11450 c554998d3d767db9a3cecd8c60731029 1034 PANTHER PTHR32063:SF31 1 1028 1.3E-288 T 22-04-2016 R615_RS05245 630f94f7c018647ea20b49874e37e499 301 SUPERFAMILY SSF56059 98 288 2.09E-49 T 22-04-2016 R615_RS05245 630f94f7c018647ea20b49874e37e499 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 284 1.3E-87 T 22-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 R615_RS05245 630f94f7c018647ea20b49874e37e499 301 Gene3D G3DSA:3.30.1490.20 103 172 1.4E-6 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS05245 630f94f7c018647ea20b49874e37e499 301 Pfam PF08443 RimK-like ATP-grasp domain 98 285 8.4E-70 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type R615_RS05245 630f94f7c018647ea20b49874e37e499 301 Gene3D G3DSA:3.40.50.20 9 102 6.6E-19 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS05245 630f94f7c018647ea20b49874e37e499 301 Gene3D G3DSA:3.30.470.20 173 277 6.6E-37 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS05245 630f94f7c018647ea20b49874e37e499 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 54.444 T 22-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK R615_RS05245 630f94f7c018647ea20b49874e37e499 301 PANTHER PTHR21621:SF0 1 298 5.5E-127 T 22-04-2016 R615_RS05245 630f94f7c018647ea20b49874e37e499 301 PANTHER PTHR21621 1 298 5.5E-127 T 22-04-2016 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 Gene3D G3DSA:3.40.1160.10 12 272 7.7E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 PANTHER PTHR11063:SF6 17 379 4.3E-110 T 22-04-2016 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 SMART SM00359 288 367 1.7E-17 T 22-04-2016 IPR002478 PUA domain GO:0003723 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 SUPERFAMILY SSF53633 17 266 1.7E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 PIRSF PIRSF000729 13 379 2.9E-125 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 17 269 35.68 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 18 377 2.8E-129 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 SUPERFAMILY SSF88697 287 378 4.48E-23 T 22-04-2016 IPR015947 PUA-like domain R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 218 235 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 Pfam PF01472 PUA domain 288 353 2.6E-18 T 22-04-2016 IPR002478 PUA domain GO:0003723 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 Pfam PF00696 Amino acid kinase family 17 245 5.9E-45 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 Gene3D G3DSA:2.30.130.10 285 377 5.8E-25 T 22-04-2016 IPR015947 PUA-like domain R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 PRINTS PR00474 Glutamate 5-kinase family signature 54 68 1.8E-52 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 PRINTS PR00474 Glutamate 5-kinase family signature 160 187 1.8E-52 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 PRINTS PR00474 Glutamate 5-kinase family signature 88 116 1.8E-52 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 PRINTS PR00474 Glutamate 5-kinase family signature 128 149 1.8E-52 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 PRINTS PR00474 Glutamate 5-kinase family signature 220 240 1.8E-52 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 R615_RS03195 cc09eb8a1aa9a2f7060ace7abbcd79e0 379 PANTHER PTHR11063 17 379 4.3E-110 T 22-04-2016 R615_RS09065 90a4312bc677c002912ac65197347a84 114 Pfam PF07238 PilZ domain 12 102 3.1E-12 T 22-04-2016 IPR009875 PilZ domain GO:0035438 R615_RS01290 aa6c03baa64f18d38544e652d02f4d3e 305 Pfam PF13704 Glycosyl transferase family 2 28 118 3.6E-13 T 22-04-2016 R615_RS01290 aa6c03baa64f18d38544e652d02f4d3e 305 SUPERFAMILY SSF53448 25 140 8.89E-9 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS01290 aa6c03baa64f18d38544e652d02f4d3e 305 Gene3D G3DSA:3.90.550.10 29 131 5.5E-6 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS14025 16eb0c52ba5460bd4727d3fd6fb12f47 503 PANTHER PTHR30389:SF1 1 497 0.0 T 22-04-2016 R615_RS14025 16eb0c52ba5460bd4727d3fd6fb12f47 503 SUPERFAMILY SSF117457 315 487 1.7E-63 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 R615_RS14025 16eb0c52ba5460bd4727d3fd6fb12f47 503 PANTHER PTHR30389 1 497 0.0 T 22-04-2016 R615_RS14025 16eb0c52ba5460bd4727d3fd6fb12f47 503 PIRSF PIRSF001394 1 503 3.2E-217 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS14025 16eb0c52ba5460bd4727d3fd6fb12f47 503 Pfam PF05683 Fumarase C-terminus 288 488 8.3E-80 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 R615_RS14025 16eb0c52ba5460bd4727d3fd6fb12f47 503 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 1.5E-63 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 R615_RS14025 16eb0c52ba5460bd4727d3fd6fb12f47 503 Gene3D G3DSA:3.20.130.10 302 487 1.5E-73 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 R615_RS14025 16eb0c52ba5460bd4727d3fd6fb12f47 503 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 324 487 4.7E-50 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 R615_RS14025 16eb0c52ba5460bd4727d3fd6fb12f47 503 Pfam PF05681 Fumarate hydratase (Fumerase) 11 284 4.0E-100 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 R615_RS02010 3dc0e2e067e20c0ca959b491049f327b 95 PANTHER PTHR15004 1 95 9.2E-29 T 22-04-2016 R615_RS02010 3dc0e2e067e20c0ca959b491049f327b 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 1.0E-28 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 R615_RS02010 3dc0e2e067e20c0ca959b491049f327b 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 3.8E-19 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 R615_RS02010 3dc0e2e067e20c0ca959b491049f327b 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 23.934 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 R615_RS02010 3dc0e2e067e20c0ca959b491049f327b 95 PANTHER PTHR15004:SF0 1 95 9.2E-29 T 22-04-2016 R615_RS02010 3dc0e2e067e20c0ca959b491049f327b 95 SUPERFAMILY SSF141000 3 93 1.44E-29 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 R615_RS10935 428e57b41b7f3aec95fd6fb577fa96a6 284 Gene3D G3DSA:2.60.40.1590 36 122 3.2E-23 T 22-04-2016 R615_RS10935 428e57b41b7f3aec95fd6fb577fa96a6 284 Gene3D G3DSA:2.70.70.10 147 277 1.3E-45 T 22-04-2016 R615_RS10935 428e57b41b7f3aec95fd6fb577fa96a6 284 Pfam PF01551 Peptidase family M23 179 273 6.8E-31 T 22-04-2016 IPR016047 Peptidase M23 R615_RS10935 428e57b41b7f3aec95fd6fb577fa96a6 284 PANTHER PTHR21666 151 274 6.8E-42 T 22-04-2016 R615_RS10935 428e57b41b7f3aec95fd6fb577fa96a6 284 SUPERFAMILY SSF51261 107 275 8.37E-51 T 22-04-2016 IPR011055 Duplicated hybrid motif R615_RS13760 90c6ba36a2830a81e90ffa37181949b5 246 Pfam PF08534 Redoxin 8 162 7.4E-32 T 22-04-2016 IPR013740 Redoxin GO:0016491 R615_RS13760 90c6ba36a2830a81e90ffa37181949b5 246 ProSitePatterns PS00195 Glutaredoxin active site. 177 193 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 R615_RS13760 90c6ba36a2830a81e90ffa37181949b5 246 Gene3D G3DSA:3.40.30.10 8 165 5.3E-61 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS13760 90c6ba36a2830a81e90ffa37181949b5 246 SUPERFAMILY SSF52833 8 243 2.13E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS13760 90c6ba36a2830a81e90ffa37181949b5 246 PANTHER PTHR10430:SF19 8 170 2.9E-89 T 22-04-2016 R615_RS13760 90c6ba36a2830a81e90ffa37181949b5 246 PRINTS PR00160 Glutaredoxin signature 216 229 3.1E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup R615_RS13760 90c6ba36a2830a81e90ffa37181949b5 246 PRINTS PR00160 Glutaredoxin signature 230 243 3.1E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup R615_RS13760 90c6ba36a2830a81e90ffa37181949b5 246 PRINTS PR00160 Glutaredoxin signature 175 193 3.1E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup R615_RS13760 90c6ba36a2830a81e90ffa37181949b5 246 Gene3D G3DSA:3.40.30.10 174 243 3.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS13760 90c6ba36a2830a81e90ffa37181949b5 246 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 168 244 6.6E-35 T 22-04-2016 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 R615_RS13760 90c6ba36a2830a81e90ffa37181949b5 246 Pfam PF00462 Glutaredoxin 175 233 8.0E-17 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 R615_RS13760 90c6ba36a2830a81e90ffa37181949b5 246 PANTHER PTHR10430 8 170 2.9E-89 T 22-04-2016 R615_RS05320 72f30bfdbc772393abc0fd95ceb195f5 259 Gene3D G3DSA:3.90.230.10 5 255 7.5E-103 T 22-04-2016 IPR000994 Peptidase M24, structural domain R615_RS05320 72f30bfdbc772393abc0fd95ceb195f5 259 PANTHER PTHR10804 1 255 1.8E-169 T 22-04-2016 R615_RS05320 72f30bfdbc772393abc0fd95ceb195f5 259 SUPERFAMILY SSF55920 4 253 9.29E-95 T 22-04-2016 IPR000994 Peptidase M24, structural domain R615_RS05320 72f30bfdbc772393abc0fd95ceb195f5 259 PANTHER PTHR10804:SF75 1 255 1.8E-169 T 22-04-2016 R615_RS05320 72f30bfdbc772393abc0fd95ceb195f5 259 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.184 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 R615_RS05320 72f30bfdbc772393abc0fd95ceb195f5 259 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 R615_RS05320 72f30bfdbc772393abc0fd95ceb195f5 259 Pfam PF00557 Metallopeptidase family M24 13 242 3.4E-56 T 22-04-2016 IPR000994 Peptidase M24, structural domain R615_RS05320 72f30bfdbc772393abc0fd95ceb195f5 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 3.5E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase R615_RS05320 72f30bfdbc772393abc0fd95ceb195f5 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 3.5E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase R615_RS05320 72f30bfdbc772393abc0fd95ceb195f5 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 3.5E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase R615_RS05320 72f30bfdbc772393abc0fd95ceb195f5 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 3.5E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase R615_RS05320 72f30bfdbc772393abc0fd95ceb195f5 259 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 251 1.1E-103 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 R615_RS16525 1140d6d569144109492dbb871dbac5d7 255 Pfam PF05742 Transport and Golgi organisation 2 1 240 4.7E-59 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 R615_RS16525 1140d6d569144109492dbb871dbac5d7 255 PANTHER PTHR17985:SF8 2 239 3.3E-57 T 22-04-2016 R615_RS16525 1140d6d569144109492dbb871dbac5d7 255 PANTHER PTHR17985 2 239 3.3E-57 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 R615_RS08680 74c7485d0fd625eaa9f3636912ef8c51 194 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 4 40 2.1E-12 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 R615_RS08680 74c7485d0fd625eaa9f3636912ef8c51 194 SUPERFAMILY SSF50022 31 187 5.06E-36 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 R615_RS08680 74c7485d0fd625eaa9f3636912ef8c51 194 PANTHER PTHR10134:SF8 7 193 4.2E-73 T 22-04-2016 R615_RS08680 74c7485d0fd625eaa9f3636912ef8c51 194 Pfam PF00355 Rieske [2Fe-2S] domain 54 175 3.3E-10 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 R615_RS08680 74c7485d0fd625eaa9f3636912ef8c51 194 Gene3D G3DSA:2.102.10.10 7 187 1.3E-36 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 R615_RS08680 74c7485d0fd625eaa9f3636912ef8c51 194 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 181 2.0E-63 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 R615_RS08680 74c7485d0fd625eaa9f3636912ef8c51 194 PRINTS PR00162 Rieske 2Fe-2S subunit signature 121 132 4.4E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 R615_RS08680 74c7485d0fd625eaa9f3636912ef8c51 194 PRINTS PR00162 Rieske 2Fe-2S subunit signature 148 160 4.4E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 R615_RS08680 74c7485d0fd625eaa9f3636912ef8c51 194 PANTHER PTHR10134 7 193 4.2E-73 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 R615_RS12675 67f379aa9394602458e8eed23ec452ae 280 PIRSF PIRSF007580 1 277 1.0E-70 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS12675 67f379aa9394602458e8eed23ec452ae 280 PANTHER PTHR39456 1 268 4.9E-63 T 22-04-2016 R615_RS12675 67f379aa9394602458e8eed23ec452ae 280 PANTHER PTHR39456:SF2 1 268 4.9E-63 T 22-04-2016 R615_RS12675 67f379aa9394602458e8eed23ec452ae 280 Pfam PF10118 Predicted metal-dependent hydrolase 14 259 2.5E-80 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS05355 4c497fdb9660e464fdd49f367e71ce29 392 SUPERFAMILY SSF69055 295 389 7.59E-32 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS05355 4c497fdb9660e464fdd49f367e71ce29 392 SUPERFAMILY SSF51735 3 149 1.43E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS05355 4c497fdb9660e464fdd49f367e71ce29 392 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 388 4.6E-158 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS05355 4c497fdb9660e464fdd49f367e71ce29 392 Gene3D G3DSA:3.40.50.720 2 149 1.7E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS05355 4c497fdb9660e464fdd49f367e71ce29 392 PANTHER PTHR30525 1 389 3.7E-217 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS05355 4c497fdb9660e464fdd49f367e71ce29 392 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 131 7.9E-46 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS05355 4c497fdb9660e464fdd49f367e71ce29 392 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 145 233 1.2E-36 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS05355 4c497fdb9660e464fdd49f367e71ce29 392 SUPERFAMILY SSF55347 125 268 1.05E-60 T 22-04-2016 R615_RS05355 4c497fdb9660e464fdd49f367e71ce29 392 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 386 47.023 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS05355 4c497fdb9660e464fdd49f367e71ce29 392 Pfam PF13288 DXP reductoisomerase C-terminal domain 265 381 1.1E-41 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS05355 4c497fdb9660e464fdd49f367e71ce29 392 Gene3D G3DSA:1.10.1740.10 307 389 1.4E-30 T 22-04-2016 R615_RS05355 4c497fdb9660e464fdd49f367e71ce29 392 PIRSF PIRSF006205 2 392 2.2E-153 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS16170 4646bb6e93937721aba41afdf19fdc84 151 SUPERFAMILY SSF54690 4 149 1.11E-50 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS16170 4646bb6e93937721aba41afdf19fdc84 151 Pfam PF02391 MoaE protein 7 120 4.8E-36 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS16170 4646bb6e93937721aba41afdf19fdc84 151 Gene3D G3DSA:3.90.1170.40 3 149 1.2E-54 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS16170 4646bb6e93937721aba41afdf19fdc84 151 PANTHER PTHR23404 26 151 8.6E-41 T 22-04-2016 R615_RS16170 4646bb6e93937721aba41afdf19fdc84 151 PANTHER PTHR23404:SF2 26 151 8.6E-41 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 Pfam PF08264 Anticodon-binding domain of tRNA 699 817 9.6E-17 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 3.8E-75 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 SUPERFAMILY SSF50677 226 415 3.98E-52 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 Gene3D G3DSA:3.90.740.10 223 424 5.1E-56 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 SUPERFAMILY SSF47323 664 858 1.66E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 SUPERFAMILY SSF52374 5 226 1.86E-145 T 22-04-2016 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 SUPERFAMILY SSF52374 416 666 1.86E-145 T 22-04-2016 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PANTHER PTHR11946 240 571 0.0 T 22-04-2016 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PANTHER PTHR11946 615 858 0.0 T 22-04-2016 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PANTHER PTHR11946 1 206 0.0 T 22-04-2016 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 8.9E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 8.9E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 8.9E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 8.9E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 8.9E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 8.9E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 8.9E-53 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 Gene3D G3DSA:1.10.730.10 649 794 2.0E-44 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 572 3.7E-8 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 1.8E-27 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 620 659 3.3E-5 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PANTHER PTHR11946:SF7 240 571 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PANTHER PTHR11946:SF7 615 858 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 PANTHER PTHR11946:SF7 1 206 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 858 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 858 23.026 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 Gene3D G3DSA:3.40.50.620 4 222 1.2E-151 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 Gene3D G3DSA:3.40.50.620 425 573 1.2E-151 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS13720 37a91139bba2e7d1e2ef3ca825fa6781 859 Gene3D G3DSA:3.40.50.620 619 648 1.2E-151 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS16360 478bd6c263bcca00806960b36da583c6 420 SUPERFAMILY SSF50249 48 125 1.67E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS16360 478bd6c263bcca00806960b36da583c6 420 SUPERFAMILY SSF68912 1 46 1.88E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 R615_RS16360 478bd6c263bcca00806960b36da583c6 420 SMART SM00959 5 47 4.5E-18 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 R615_RS16360 478bd6c263bcca00806960b36da583c6 420 SMART SM00382 170 355 1.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS16360 478bd6c263bcca00806960b36da583c6 420 Gene3D G3DSA:2.40.50.140 49 116 2.4E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS16360 478bd6c263bcca00806960b36da583c6 420 SMART SM00357 52 118 5.3E-18 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 R615_RS16360 478bd6c263bcca00806960b36da583c6 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.4E-215 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 R615_RS16360 478bd6c263bcca00806960b36da583c6 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.7E-17 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 R615_RS16360 478bd6c263bcca00806960b36da583c6 420 SUPERFAMILY SSF52540 90 371 1.69E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16360 478bd6c263bcca00806960b36da583c6 420 PANTHER PTHR15184 47 417 6.7E-192 T 22-04-2016 R615_RS16360 478bd6c263bcca00806960b36da583c6 420 Gene3D G3DSA:1.10.720.10 1 47 4.1E-21 T 22-04-2016 R615_RS16360 478bd6c263bcca00806960b36da583c6 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.2E-24 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS16360 478bd6c263bcca00806960b36da583c6 420 PANTHER PTHR15184:SF34 47 417 6.7E-192 T 22-04-2016 R615_RS16360 478bd6c263bcca00806960b36da583c6 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.0E-31 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 R615_RS16360 478bd6c263bcca00806960b36da583c6 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 245.4 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 R615_RS16360 478bd6c263bcca00806960b36da583c6 420 Gene3D G3DSA:3.40.50.300 132 417 7.2E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14990 8c51e25e2bf6883bc8d94ac470fd745c 114 PANTHER PTHR23089 2 114 2.6E-56 T 22-04-2016 IPR001310 Histidine triad (HIT) protein R615_RS14990 8c51e25e2bf6883bc8d94ac470fd745c 114 SUPERFAMILY SSF54197 1 113 7.11E-39 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 R615_RS14990 8c51e25e2bf6883bc8d94ac470fd745c 114 PRINTS PR00332 Histidine triad family signature 6 22 1.4E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein R615_RS14990 8c51e25e2bf6883bc8d94ac470fd745c 114 PRINTS PR00332 Histidine triad family signature 94 104 1.4E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein R615_RS14990 8c51e25e2bf6883bc8d94ac470fd745c 114 PRINTS PR00332 Histidine triad family signature 27 45 1.4E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein R615_RS14990 8c51e25e2bf6883bc8d94ac470fd745c 114 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 22-04-2016 IPR019808 Histidine triad, conserved site R615_RS14990 8c51e25e2bf6883bc8d94ac470fd745c 114 Gene3D G3DSA:3.30.428.10 2 114 1.2E-39 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 R615_RS14990 8c51e25e2bf6883bc8d94ac470fd745c 114 PANTHER PTHR23089:SF3 2 114 2.6E-56 T 22-04-2016 R615_RS14990 8c51e25e2bf6883bc8d94ac470fd745c 114 Pfam PF01230 HIT domain 12 108 1.7E-29 T 22-04-2016 IPR001310 Histidine triad (HIT) protein R615_RS11125 35f809d2e8764e0adaf2cc3036c4576d 248 PANTHER PTHR30269 1 247 2.9E-31 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 R615_RS11125 35f809d2e8764e0adaf2cc3036c4576d 248 Pfam PF01925 Sulfite exporter TauE/SafE 6 245 1.2E-36 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 R615_RS06705 6d9a02833c84afb9cae4db02040a90a3 180 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 180 4.1E-61 T 22-04-2016 IPR018636 Protein of unknown function DUF2058 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 60 5.2E-19 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 PANTHER PTHR21342 1 159 1.2E-77 T 22-04-2016 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 Pfam PF01467 Cytidylyltransferase-like 5 133 3.0E-20 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 PANTHER PTHR21342:SF1 1 159 1.2E-77 T 22-04-2016 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 Gene3D G3DSA:3.40.50.620 1 156 3.0E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 76 0.005 T 22-04-2016 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 SUPERFAMILY SSF52374 1 155 1.69E-44 T 22-04-2016 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 7.7E-49 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 7.7E-49 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 7.7E-49 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 7.7E-49 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 7.7E-49 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 35.721 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 R615_RS00970 7b6032bc9765b78df1590ca3eafdcf77 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 155 1.6E-59 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 PIRSF PIRSF002811 2 606 1.2E-150 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 SMART SM00400 36 90 2.8E-35 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 SUPERFAMILY SSF56731 115 425 3.01E-108 T 22-04-2016 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 Gene3D G3DSA:3.90.980.10 115 240 3.8E-44 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 Pfam PF13662 Toprim domain 262 327 1.2E-16 T 22-04-2016 IPR006171 Toprim domain R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 Pfam PF08278 DNA primase DnaG DnaB-binding 477 592 8.6E-12 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 SUPERFAMILY SSF117023 477 596 1.22E-8 T 22-04-2016 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 SUPERFAMILY SSF57783 4 101 1.65E-37 T 22-04-2016 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 Gene3D G3DSA:3.90.580.10 1 101 4.1E-42 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 SMART SM00493 259 330 2.2E-16 T 22-04-2016 IPR006171 Toprim domain R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 PANTHER PTHR30313 3 429 6.6E-159 T 22-04-2016 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 Hamap MF_00974 DNA primase [dnaG]. 4 594 29.158 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 TIGRFAM TIGR01391 dnaG: DNA primase 4 418 2.9E-149 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 252 8.1E-42 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 Gene3D G3DSA:3.40.1360.10 241 365 4.1E-45 T 22-04-2016 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 Pfam PF01807 CHC2 zinc finger 6 101 6.3E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 Gene3D G3DSA:1.20.50.20 368 425 2.3E-17 T 22-04-2016 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 2.4E-10 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 R615_RS14215 2c3e78aec51df636d5a194f582f902d1 609 Gene3D G3DSA:1.10.860.10 476 597 6.6E-11 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal R615_RS07620 77eae14e26ef0d6fc557b589c160ab98 346 PANTHER PTHR11019:SF68 57 337 3.2E-40 T 22-04-2016 R615_RS07620 77eae14e26ef0d6fc557b589c160ab98 346 Gene3D G3DSA:3.40.50.880 11 235 5.0E-33 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS07620 77eae14e26ef0d6fc557b589c160ab98 346 SUPERFAMILY SSF52317 10 206 1.13E-27 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS07620 77eae14e26ef0d6fc557b589c160ab98 346 SUPERFAMILY SSF46689 230 280 9.41E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS07620 77eae14e26ef0d6fc557b589c160ab98 346 PANTHER PTHR11019 57 337 3.2E-40 T 22-04-2016 R615_RS07620 77eae14e26ef0d6fc557b589c160ab98 346 Gene3D G3DSA:1.10.10.60 283 333 4.1E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS07620 77eae14e26ef0d6fc557b589c160ab98 346 Gene3D G3DSA:1.10.10.60 236 282 5.8E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS07620 77eae14e26ef0d6fc557b589c160ab98 346 SUPERFAMILY SSF46689 282 334 1.48E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS07620 77eae14e26ef0d6fc557b589c160ab98 346 SMART SM00342 246 329 6.8E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS07620 77eae14e26ef0d6fc557b589c160ab98 346 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 313 329 2.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS07620 77eae14e26ef0d6fc557b589c160ab98 346 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 313 2.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS07620 77eae14e26ef0d6fc557b589c160ab98 346 Pfam PF12833 Helix-turn-helix domain 252 330 1.2E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS10230 97c2ca82dd4075491b09cfdc0ee96b7c 484 PANTHER PTHR32024:SF2 1 484 1.4E-154 T 22-04-2016 R615_RS10230 97c2ca82dd4075491b09cfdc0ee96b7c 484 Pfam PF02386 Cation transport protein 47 478 2.7E-54 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 R615_RS10230 97c2ca82dd4075491b09cfdc0ee96b7c 484 PIRSF PIRSF006247 1 484 3.3E-146 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 R615_RS10230 97c2ca82dd4075491b09cfdc0ee96b7c 484 PANTHER PTHR32024 1 484 1.4E-154 T 22-04-2016 R615_RS05695 cbf26e6cb2e3238d3a3e9e6816a08107 257 Pfam PF00970 Oxidoreductase FAD-binding domain 16 91 3.2E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain R615_RS05695 cbf26e6cb2e3238d3a3e9e6816a08107 257 Gene3D G3DSA:3.40.50.80 97 256 1.9E-45 T 22-04-2016 R615_RS05695 cbf26e6cb2e3238d3a3e9e6816a08107 257 SUPERFAMILY SSF52343 103 255 7.73E-41 T 22-04-2016 R615_RS05695 cbf26e6cb2e3238d3a3e9e6816a08107 257 Gene3D G3DSA:2.40.30.10 5 96 2.2E-29 T 22-04-2016 R615_RS05695 cbf26e6cb2e3238d3a3e9e6816a08107 257 SUPERFAMILY SSF63380 4 99 8.24E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 R615_RS05695 cbf26e6cb2e3238d3a3e9e6816a08107 257 Pfam PF00175 Oxidoreductase NAD-binding domain 112 228 2.7E-8 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 R615_RS05695 cbf26e6cb2e3238d3a3e9e6816a08107 257 PANTHER PTHR19370:SF98 5 256 3.6E-113 T 22-04-2016 R615_RS05695 cbf26e6cb2e3238d3a3e9e6816a08107 257 PANTHER PTHR19370 5 256 3.6E-113 T 22-04-2016 R615_RS05695 cbf26e6cb2e3238d3a3e9e6816a08107 257 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 5.9E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 R615_RS05695 cbf26e6cb2e3238d3a3e9e6816a08107 257 PRINTS PR00410 Phenol hydroxylase reductase family signature 51 58 5.9E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 R615_RS05695 cbf26e6cb2e3238d3a3e9e6816a08107 257 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 5.9E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 R615_RS16375 5c9e30225f901cd86fe454bf21df4bec 283 Pfam PF01380 SIS domain 128 256 1.4E-18 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 R615_RS16375 5c9e30225f901cd86fe454bf21df4bec 283 PANTHER PTHR30514 6 283 1.3E-77 T 22-04-2016 R615_RS16375 5c9e30225f901cd86fe454bf21df4bec 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 78 1.9E-23 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 R615_RS16375 5c9e30225f901cd86fe454bf21df4bec 283 SUPERFAMILY SSF46689 5 77 4.3E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS16375 5c9e30225f901cd86fe454bf21df4bec 283 PANTHER PTHR30514:SF1 6 283 1.3E-77 T 22-04-2016 R615_RS16375 5c9e30225f901cd86fe454bf21df4bec 283 Gene3D G3DSA:1.10.10.10 4 78 5.0E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS16375 5c9e30225f901cd86fe454bf21df4bec 283 SUPERFAMILY SSF53697 88 280 1.52E-34 T 22-04-2016 R615_RS16375 5c9e30225f901cd86fe454bf21df4bec 283 ProSitePatterns PS00356 LacI-type HTH domain signature. 40 58 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 R615_RS16375 5c9e30225f901cd86fe454bf21df4bec 283 Gene3D G3DSA:3.40.50.10490 108 264 7.0E-33 T 22-04-2016 R615_RS02710 2477e4483e775534cda6f32ba587f5b3 524 Pfam PF13751 Transposase DDE domain 384 517 1.5E-29 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS02710 2477e4483e775534cda6f32ba587f5b3 524 PANTHER PTHR33408:SF2 1 354 4.6E-61 T 22-04-2016 R615_RS02710 2477e4483e775534cda6f32ba587f5b3 524 PANTHER PTHR33408:SF2 371 519 4.6E-61 T 22-04-2016 R615_RS02710 2477e4483e775534cda6f32ba587f5b3 524 Pfam PF05598 Transposase domain (DUF772) 55 124 1.1E-15 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS02710 2477e4483e775534cda6f32ba587f5b3 524 PANTHER PTHR33408 1 354 4.6E-61 T 22-04-2016 R615_RS02710 2477e4483e775534cda6f32ba587f5b3 524 PANTHER PTHR33408 371 519 4.6E-61 T 22-04-2016 R615_RS11405 2477e4483e775534cda6f32ba587f5b3 524 Pfam PF13751 Transposase DDE domain 384 517 1.5E-29 T 22-04-2016 IPR025668 Transposase DDE domain R615_RS11405 2477e4483e775534cda6f32ba587f5b3 524 PANTHER PTHR33408:SF2 1 354 4.6E-61 T 22-04-2016 R615_RS11405 2477e4483e775534cda6f32ba587f5b3 524 PANTHER PTHR33408:SF2 371 519 4.6E-61 T 22-04-2016 R615_RS11405 2477e4483e775534cda6f32ba587f5b3 524 Pfam PF05598 Transposase domain (DUF772) 55 124 1.1E-15 T 22-04-2016 IPR008490 Transposase InsH, N-terminal R615_RS11405 2477e4483e775534cda6f32ba587f5b3 524 PANTHER PTHR33408 1 354 4.6E-61 T 22-04-2016 R615_RS11405 2477e4483e775534cda6f32ba587f5b3 524 PANTHER PTHR33408 371 519 4.6E-61 T 22-04-2016 R615_RS03340 d726f517de080c1df791607c0af4289a 794 Pfam PF07696 7TMR-DISM extracellular 2 48 182 2.7E-22 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 R615_RS03340 d726f517de080c1df791607c0af4289a 794 Pfam PF00072 Response regulator receiver domain 657 774 2.0E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS03340 d726f517de080c1df791607c0af4289a 794 SUPERFAMILY SSF47384 411 477 2.16E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03340 d726f517de080c1df791607c0af4289a 794 Gene3D G3DSA:3.40.50.2300 654 781 1.4E-25 T 22-04-2016 R615_RS03340 d726f517de080c1df791607c0af4289a 794 PANTHER PTHR24423 409 777 3.0E-52 T 22-04-2016 R615_RS03340 d726f517de080c1df791607c0af4289a 794 PANTHER PTHR24423 46 63 3.0E-52 T 22-04-2016 R615_RS03340 d726f517de080c1df791607c0af4289a 794 SMART SM00448 655 774 4.8E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS03340 d726f517de080c1df791607c0af4289a 794 SUPERFAMILY SSF55874 465 636 2.76E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS03340 d726f517de080c1df791607c0af4289a 794 SMART SM00388 411 476 1.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03340 d726f517de080c1df791607c0af4289a 794 Gene3D G3DSA:3.30.565.10 476 640 3.8E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS03340 d726f517de080c1df791607c0af4289a 794 Pfam PF00512 His Kinase A (phospho-acceptor) domain 415 476 1.3E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03340 d726f517de080c1df791607c0af4289a 794 Gene3D G3DSA:1.10.287.130 410 472 5.9E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03340 d726f517de080c1df791607c0af4289a 794 SUPERFAMILY SSF52172 654 783 1.04E-23 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS14565 ca3ee314afdccca8c74bc2691abdb405 240 Gene3D G3DSA:3.30.1330.30 5 87 1.2E-18 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like R615_RS14565 ca3ee314afdccca8c74bc2691abdb405 240 SMART SM00967 22 92 3.4E-6 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 R615_RS14565 ca3ee314afdccca8c74bc2691abdb405 240 Pfam PF00588 SpoU rRNA Methylase family 101 236 1.0E-26 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 R615_RS14565 ca3ee314afdccca8c74bc2691abdb405 240 PANTHER PTHR12029 1 238 3.2E-37 T 22-04-2016 R615_RS14565 ca3ee314afdccca8c74bc2691abdb405 240 SUPERFAMILY SSF55315 3 88 2.12E-15 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like R615_RS14565 ca3ee314afdccca8c74bc2691abdb405 240 SUPERFAMILY SSF75217 96 240 6.54E-28 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases R615_RS14565 ca3ee314afdccca8c74bc2691abdb405 240 Gene3D G3DSA:3.40.1280.10 101 239 1.3E-31 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal R615_RS03045 27155f07a4f7e45e865190a061b950a0 381 Pfam PF01098 Cell cycle protein 35 379 5.8E-106 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 R615_RS03045 27155f07a4f7e45e865190a061b950a0 381 PANTHER PTHR30474 27 380 4.4E-152 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 R615_RS03045 27155f07a4f7e45e865190a061b950a0 381 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 337 361 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 R615_RS03045 27155f07a4f7e45e865190a061b950a0 381 PANTHER PTHR30474:SF1 27 380 4.4E-152 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 R615_RS03045 27155f07a4f7e45e865190a061b950a0 381 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 32 380 1.5E-129 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 R615_RS08815 2eaf3d430ec3061b0fa8c30aba7648b3 459 SUPERFAMILY SSF56954 9 434 6.41E-58 T 22-04-2016 R615_RS08815 2eaf3d430ec3061b0fa8c30aba7648b3 459 Gene3D G3DSA:1.20.1600.10 30 434 2.0E-39 T 22-04-2016 R615_RS08815 2eaf3d430ec3061b0fa8c30aba7648b3 459 PANTHER PTHR30203 15 456 4.2E-22 T 22-04-2016 R615_RS08815 2eaf3d430ec3061b0fa8c30aba7648b3 459 Pfam PF02321 Outer membrane efflux protein 254 435 1.9E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS08815 2eaf3d430ec3061b0fa8c30aba7648b3 459 Pfam PF02321 Outer membrane efflux protein 34 217 2.1E-13 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS00525 642906595dee0cea44a185cde93ebdae 237 PANTHER PTHR34580 5 233 2.7E-33 T 22-04-2016 R615_RS00525 642906595dee0cea44a185cde93ebdae 237 PANTHER PTHR34580:SF3 5 233 2.7E-33 T 22-04-2016 R615_RS00525 642906595dee0cea44a185cde93ebdae 237 Pfam PF08279 HTH domain 6 57 1.4E-15 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 R615_RS00525 642906595dee0cea44a185cde93ebdae 237 SUPERFAMILY SSF46785 3 61 2.47E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00525 642906595dee0cea44a185cde93ebdae 237 Pfam PF13280 WYL domain 150 233 1.4E-15 T 22-04-2016 IPR026881 WYL domain R615_RS00525 642906595dee0cea44a185cde93ebdae 237 Gene3D G3DSA:1.10.10.10 3 63 8.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 Gene3D G3DSA:1.10.1660.10 56 132 2.0E-23 T 22-04-2016 R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 SMART SM00422 1 70 8.0E-28 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 Pfam PF00376 MerR family regulatory protein 2 39 5.4E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.8E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.8E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.8E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 SUPERFAMILY SSF46955 1 125 1.39E-34 T 22-04-2016 IPR009061 Putative DNA-binding domain R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 Pfam PF09278 MerR, DNA binding 44 106 1.1E-18 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 PANTHER PTHR30204 1 117 3.4E-42 T 22-04-2016 R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 PANTHER PTHR30204:SF18 1 117 3.4E-42 T 22-04-2016 R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 1.5E-50 T 22-04-2016 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 R615_RS08905 d66bd4edd4fe8d562b7d4151124b7a99 135 Gene3D G3DSA:1.10.1660.10 1 55 7.4E-25 T 22-04-2016 R615_RS08060 00cec2af3b6afa9eb6d44cd01a2ba595 334 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 37 327 5.0E-71 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 R615_RS08060 00cec2af3b6afa9eb6d44cd01a2ba595 334 PANTHER PTHR30160:SF13 1 312 1.3E-71 T 22-04-2016 R615_RS08060 00cec2af3b6afa9eb6d44cd01a2ba595 334 Gene3D G3DSA:3.40.50.300 62 157 9.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08060 00cec2af3b6afa9eb6d44cd01a2ba595 334 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 30 324 5.6E-93 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 R615_RS08060 00cec2af3b6afa9eb6d44cd01a2ba595 334 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 17 329 35.337 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 R615_RS08060 00cec2af3b6afa9eb6d44cd01a2ba595 334 PANTHER PTHR30160 1 312 1.3E-71 T 22-04-2016 R615_RS08060 00cec2af3b6afa9eb6d44cd01a2ba595 334 SUPERFAMILY SSF52540 62 209 8.76E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10170 7ea1ab6f5f27293bb490592e567ad43f 151 Pfam PF00301 Rubredoxin 99 145 1.6E-19 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 R615_RS10170 7ea1ab6f5f27293bb490592e567ad43f 151 Pfam PF00301 Rubredoxin 3 50 8.1E-17 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 R615_RS10170 7ea1ab6f5f27293bb490592e567ad43f 151 SUPERFAMILY SSF57802 1 54 2.36E-16 T 22-04-2016 R615_RS10170 7ea1ab6f5f27293bb490592e567ad43f 151 PRINTS PR00163 Rubredoxin signature 129 145 7.0E-9 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 R615_RS10170 7ea1ab6f5f27293bb490592e567ad43f 151 PRINTS PR00163 Rubredoxin signature 99 115 7.0E-9 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 R615_RS10170 7ea1ab6f5f27293bb490592e567ad43f 151 Gene3D G3DSA:2.20.28.10 1 54 6.9E-19 T 22-04-2016 IPR004039 Rubredoxin-type fold R615_RS10170 7ea1ab6f5f27293bb490592e567ad43f 151 Gene3D G3DSA:2.20.28.10 98 149 2.2E-22 T 22-04-2016 IPR004039 Rubredoxin-type fold R615_RS10170 7ea1ab6f5f27293bb490592e567ad43f 151 SUPERFAMILY SSF57802 97 149 7.74E-20 T 22-04-2016 R615_RS10170 7ea1ab6f5f27293bb490592e567ad43f 151 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 R615_RS10170 7ea1ab6f5f27293bb490592e567ad43f 151 ProSitePatterns PS00202 Rubredoxin signature. 129 139 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 PANTHER PTHR11731 142 410 4.8E-93 T 22-04-2016 R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 PANTHER PTHR11731 1 105 4.8E-93 T 22-04-2016 R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 Hamap MF_00671 Protein TolB [tolB]. 1 408 32.957 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 SUPERFAMILY SSF69304 138 410 1.05E-56 T 22-04-2016 R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 Pfam PF07676 WD40-like Beta Propeller Repeat 218 253 1.8E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 Pfam PF07676 WD40-like Beta Propeller Repeat 176 208 1.7E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 Pfam PF07676 WD40-like Beta Propeller Repeat 262 296 2.2E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 Gene3D G3DSA:3.40.50.10070 8 133 1.4E-43 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 SUPERFAMILY SSF52964 13 143 8.24E-36 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 Gene3D G3DSA:2.130.10.10 134 410 1.5E-72 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 2 409 2.3E-149 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 Pfam PF04052 TolB amino-terminal domain 9 108 9.2E-29 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 PANTHER PTHR11731:SF123 142 410 4.8E-93 T 22-04-2016 R615_RS06815 d409bc7573c621a8ddbde3afdca1dfac 413 PANTHER PTHR11731:SF123 1 105 4.8E-93 T 22-04-2016 R615_RS10745 f599365439cadcf96e14c504dd078ace 352 PANTHER PTHR30307 2 344 6.6E-170 T 22-04-2016 R615_RS10745 f599365439cadcf96e14c504dd078ace 352 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 337 2.2E-142 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS10745 f599365439cadcf96e14c504dd078ace 352 SUPERFAMILY SSF111337 1 337 4.97E-133 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS10745 f599365439cadcf96e14c504dd078ace 352 Pfam PF02547 Queuosine biosynthesis protein 4 337 1.6E-131 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS10745 f599365439cadcf96e14c504dd078ace 352 PANTHER PTHR30307:SF0 2 344 6.6E-170 T 22-04-2016 R615_RS10745 f599365439cadcf96e14c504dd078ace 352 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 338 46.366 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS10745 f599365439cadcf96e14c504dd078ace 352 Gene3D G3DSA:2.40.10.240 64 139 8.5E-14 T 22-04-2016 R615_RS10745 f599365439cadcf96e14c504dd078ace 352 Gene3D G3DSA:3.40.1780.10 176 337 2.7E-99 T 22-04-2016 R615_RS10745 f599365439cadcf96e14c504dd078ace 352 Gene3D G3DSA:3.40.1780.10 1 62 2.7E-99 T 22-04-2016 R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 Gene3D G3DSA:1.10.8.10 154 197 1.3E-16 T 22-04-2016 R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 SUPERFAMILY SSF50249 1 63 3.31E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 30.006 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 SMART SM00278 108 127 0.56 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 SMART SM00278 73 92 14.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 SUPERFAMILY SSF46929 154 198 3.14E-9 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 Gene3D G3DSA:2.40.50.140 1 64 4.9E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 Pfam PF01330 RuvA N terminal domain 1 62 1.5E-20 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 Pfam PF07499 RuvA, C-terminal domain 157 197 6.1E-11 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 PANTHER PTHR33796 2 202 5.8E-75 T 22-04-2016 R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 Gene3D G3DSA:1.10.150.20 68 137 5.4E-29 T 22-04-2016 R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.1E-16 T 22-04-2016 R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 200 9.3E-55 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 R615_RS06785 a08b4ebbf1bf1a31d14a0599d31ecb90 203 SUPERFAMILY SSF47781 66 136 2.85E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 R615_RS06845 60d7d7247ff7317b3723f86f53d3308b 478 Gene3D G3DSA:1.25.40.10 300 355 3.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS06845 60d7d7247ff7317b3723f86f53d3308b 478 SUPERFAMILY SSF48452 301 448 2.68E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS06845 60d7d7247ff7317b3723f86f53d3308b 478 Pfam PF01435 Peptidase family M48 70 251 1.9E-30 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 R615_RS06845 60d7d7247ff7317b3723f86f53d3308b 478 Gene3D G3DSA:3.30.2010.10 65 141 3.3E-16 T 22-04-2016 R615_RS06845 60d7d7247ff7317b3723f86f53d3308b 478 Gene3D G3DSA:1.25.40.10 356 431 5.3E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS06845 60d7d7247ff7317b3723f86f53d3308b 478 Pfam PF14559 Tetratricopeptide repeat 349 407 4.3E-6 T 22-04-2016 R615_RS06845 60d7d7247ff7317b3723f86f53d3308b 478 PANTHER PTHR22726 1 344 1.6E-72 T 22-04-2016 R615_RS06845 60d7d7247ff7317b3723f86f53d3308b 478 PANTHER PTHR22726:SF10 1 344 1.6E-72 T 22-04-2016 R615_RS06845 60d7d7247ff7317b3723f86f53d3308b 478 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 1 478 27.729 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 R615_RS09165 431fe3430673535f8f56ec6251ab758a 232 SUPERFAMILY SSF48008 85 221 6.54E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal R615_RS09165 431fe3430673535f8f56ec6251ab758a 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 4.1E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS09165 431fe3430673535f8f56ec6251ab758a 232 Gene3D G3DSA:1.20.120.530 82 227 3.5E-31 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal R615_RS09165 431fe3430673535f8f56ec6251ab758a 232 SMART SM00895 89 216 6.5E-26 T 22-04-2016 IPR011711 GntR, C-terminal R615_RS09165 431fe3430673535f8f56ec6251ab758a 232 SUPERFAMILY SSF46785 15 108 7.18E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS09165 431fe3430673535f8f56ec6251ab758a 232 PANTHER PTHR11751 7 105 1.6E-38 T 22-04-2016 R615_RS09165 431fe3430673535f8f56ec6251ab758a 232 Gene3D G3DSA:1.10.10.10 15 79 1.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS09165 431fe3430673535f8f56ec6251ab758a 232 Pfam PF07729 FCD domain 89 215 8.2E-27 T 22-04-2016 IPR011711 GntR, C-terminal R615_RS09165 431fe3430673535f8f56ec6251ab758a 232 PANTHER PTHR11751:SF426 7 105 1.6E-38 T 22-04-2016 R615_RS09165 431fe3430673535f8f56ec6251ab758a 232 SMART SM00345 21 79 5.7E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 Gene3D G3DSA:3.40.190.10 146 315 4.0E-65 T 22-04-2016 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 Gene3D G3DSA:3.40.190.10 36 145 9.4E-10 T 22-04-2016 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 PANTHER PTHR30222 10 366 2.9E-143 T 22-04-2016 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 Pfam PF13416 Bacterial extracellular solute-binding protein 42 331 3.3E-32 T 22-04-2016 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 PANTHER PTHR30222:SF11 10 366 2.9E-143 T 22-04-2016 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 PIRSF PIRSF019574 2 366 5.6E-127 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 74 88 1.1E-54 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 155 169 1.1E-54 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 215 234 1.1E-54 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 310 336 1.1E-54 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 31 47 1.1E-54 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 47 68 1.1E-54 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 178 197 1.1E-54 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 265 284 1.1E-54 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 124 140 1.1E-54 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 R615_RS01380 441a4c662664a64a39ec9703f875d2ff 366 SUPERFAMILY SSF53850 25 365 1.33E-95 T 22-04-2016 R615_RS07530 6ecb5e8b0492a38f279cd04eb31a056f 257 SMART SM00100 31 149 1.3E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS07530 6ecb5e8b0492a38f279cd04eb31a056f 257 SUPERFAMILY SSF46785 166 246 1.45E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS07530 6ecb5e8b0492a38f279cd04eb31a056f 257 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 210 225 1.1E-9 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 R615_RS07530 6ecb5e8b0492a38f279cd04eb31a056f 257 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 194 210 1.1E-9 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 R615_RS07530 6ecb5e8b0492a38f279cd04eb31a056f 257 Gene3D G3DSA:1.10.10.10 171 245 6.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS07530 6ecb5e8b0492a38f279cd04eb31a056f 257 Pfam PF13545 Crp-like helix-turn-helix domain 169 242 6.8E-18 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 R615_RS07530 6ecb5e8b0492a38f279cd04eb31a056f 257 Pfam PF00027 Cyclic nucleotide-binding domain 52 134 1.5E-13 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS07530 6ecb5e8b0492a38f279cd04eb31a056f 257 SMART SM00419 188 236 1.0E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 R615_RS07530 6ecb5e8b0492a38f279cd04eb31a056f 257 Gene3D G3DSA:2.60.120.10 20 170 1.6E-28 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS07530 6ecb5e8b0492a38f279cd04eb31a056f 257 PANTHER PTHR24567 16 245 6.1E-91 T 22-04-2016 R615_RS07530 6ecb5e8b0492a38f279cd04eb31a056f 257 SUPERFAMILY SSF51206 24 163 1.19E-28 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like R615_RS07530 6ecb5e8b0492a38f279cd04eb31a056f 257 PANTHER PTHR24567:SF28 16 245 6.1E-91 T 22-04-2016 R615_RS11710 58bbede3b1c8c3fd7bdef14b0c61d43e 207 Pfam PF00929 Exonuclease 33 192 3.8E-9 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III R615_RS11710 58bbede3b1c8c3fd7bdef14b0c61d43e 207 SMART SM00479 31 204 1.2E-14 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III R615_RS11710 58bbede3b1c8c3fd7bdef14b0c61d43e 207 Gene3D G3DSA:3.30.420.10 24 201 1.0E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS11710 58bbede3b1c8c3fd7bdef14b0c61d43e 207 PANTHER PTHR30231:SF7 1 200 2.6E-54 T 22-04-2016 R615_RS11710 58bbede3b1c8c3fd7bdef14b0c61d43e 207 PANTHER PTHR30231 1 200 2.6E-54 T 22-04-2016 R615_RS11710 58bbede3b1c8c3fd7bdef14b0c61d43e 207 SUPERFAMILY SSF53098 26 202 8.1E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS15105 3f7e947b1a90244a638cda8140525530 221 Pfam PF13489 Methyltransferase domain 77 209 5.6E-22 T 22-04-2016 R615_RS15105 3f7e947b1a90244a638cda8140525530 221 SUPERFAMILY SSF53335 74 213 2.21E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS15105 3f7e947b1a90244a638cda8140525530 221 Gene3D G3DSA:3.40.50.150 92 211 8.1E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS15895 100f066c0749919c6cc15bfc8d254c7c 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 9.2E-67 T 22-04-2016 IPR023798 Ribosomal protein S7 domain R615_RS15895 100f066c0749919c6cc15bfc8d254c7c 156 SUPERFAMILY SSF47973 6 149 7.19E-61 T 22-04-2016 IPR023798 Ribosomal protein S7 domain R615_RS15895 100f066c0749919c6cc15bfc8d254c7c 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.098 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 R615_RS15895 100f066c0749919c6cc15bfc8d254c7c 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 1.2E-68 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 R615_RS15895 100f066c0749919c6cc15bfc8d254c7c 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 R615_RS15895 100f066c0749919c6cc15bfc8d254c7c 156 PIRSF PIRSF002122 2 156 5.7E-60 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 R615_RS15895 100f066c0749919c6cc15bfc8d254c7c 156 Gene3D G3DSA:1.10.455.10 8 156 5.0E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain R615_RS15895 100f066c0749919c6cc15bfc8d254c7c 156 PANTHER PTHR11205 1 156 7.2E-88 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 Gene3D G3DSA:2.40.10.10 181 291 4.8E-41 T 22-04-2016 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 PANTHER PTHR22939 48 386 1.7E-129 T 22-04-2016 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 SUPERFAMILY SSF50494 61 276 3.99E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 SMART SM00228 290 373 8.2E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 Pfam PF13180 PDZ domain 290 378 4.2E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 2.8E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 2.8E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 2.8E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 2.8E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 PRINTS PR00834 HtrA/DegQ protease family signature 187 211 2.8E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 2.8E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 SUPERFAMILY SSF50156 249 373 3.02E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 PANTHER PTHR22939:SF93 48 386 1.7E-129 T 22-04-2016 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 Pfam PF13365 Trypsin-like peptidase domain 117 251 2.4E-32 T 22-04-2016 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 Gene3D G3DSA:2.30.42.10 292 388 4.8E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS02155 a93afcbdfad46ce3b4aa5f64443400d6 392 Gene3D G3DSA:2.40.10.10 63 178 6.6E-37 T 22-04-2016 R615_RS16900 02603e4c037dc95c654348cfd26a2c7e 311 PANTHER PTHR34595 1 255 1.5E-57 T 22-04-2016 R615_RS16900 02603e4c037dc95c654348cfd26a2c7e 311 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 307 1.9E-72 T 22-04-2016 IPR007296 Domain of unknown function DUF403 R615_RS04430 adccafd229d2d7a268cc9bb568e899e1 521 PANTHER PTHR16254 4 511 5.0E-99 T 22-04-2016 R615_RS04430 adccafd229d2d7a268cc9bb568e899e1 521 Gene3D G3DSA:3.40.50.720 384 513 2.2E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04430 adccafd229d2d7a268cc9bb568e899e1 521 Pfam PF00999 Sodium/hydrogen exchanger family 4 347 4.3E-36 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 R615_RS04430 adccafd229d2d7a268cc9bb568e899e1 521 Pfam PF02254 TrkA-N domain 385 500 6.0E-17 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 R615_RS04430 adccafd229d2d7a268cc9bb568e899e1 521 SUPERFAMILY SSF51735 385 510 1.29E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04430 adccafd229d2d7a268cc9bb568e899e1 521 PANTHER PTHR16254:SF14 4 511 5.0E-99 T 22-04-2016 R615_RS04215 1c4239aa3dfc1335c031fe2b7cc45330 160 Gene3D G3DSA:3.40.50.1010 2 153 1.2E-43 T 22-04-2016 IPR029060 PIN domain-like R615_RS04215 1c4239aa3dfc1335c031fe2b7cc45330 160 Pfam PF01936 NYN domain 4 151 1.8E-39 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type R615_RS04215 1c4239aa3dfc1335c031fe2b7cc45330 160 PANTHER PTHR35458:SF2 1 156 1.2E-54 T 22-04-2016 R615_RS04215 1c4239aa3dfc1335c031fe2b7cc45330 160 PANTHER PTHR35458 1 156 1.2E-54 T 22-04-2016 R615_RS13350 4e2bd77026c9c7a3172456227268187e 286 Pfam PF03537 Glycoside-hydrolase family GH114 55 279 5.8E-88 T 22-04-2016 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain R615_RS13350 4e2bd77026c9c7a3172456227268187e 286 PANTHER PTHR35273 7 283 2.9E-100 T 22-04-2016 R615_RS13350 4e2bd77026c9c7a3172456227268187e 286 SUPERFAMILY SSF51445 52 280 7.58E-53 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily R615_RS13350 4e2bd77026c9c7a3172456227268187e 286 PANTHER PTHR35273:SF1 7 283 2.9E-100 T 22-04-2016 R615_RS12355 f8dd344d3d8a8a4a1fc484192e0e7973 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 258 1.5E-39 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 R615_RS12355 f8dd344d3d8a8a4a1fc484192e0e7973 259 Gene3D G3DSA:3.90.226.10 2 257 1.4E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS12355 f8dd344d3d8a8a4a1fc484192e0e7973 259 PANTHER PTHR11941 11 256 4.0E-77 T 22-04-2016 R615_RS12355 f8dd344d3d8a8a4a1fc484192e0e7973 259 ProSitePatterns PS01287 RNA 3'-terminal phosphate cyclase signature. 136 146 - T 22-04-2016 IPR020719 RNA 3'-terminal phosphate cyclase-like, conserved site R615_RS12355 f8dd344d3d8a8a4a1fc484192e0e7973 259 PANTHER PTHR11941:SF82 11 256 4.0E-77 T 22-04-2016 R615_RS12355 f8dd344d3d8a8a4a1fc484192e0e7973 259 SUPERFAMILY SSF52096 2 258 1.83E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS13420 29c7e460e45749a5039c1a3cd673b0a9 466 SMART SM00487 23 224 1.7E-62 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS13420 29c7e460e45749a5039c1a3cd673b0a9 466 Gene3D G3DSA:3.40.50.300 5 219 6.2E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13420 29c7e460e45749a5039c1a3cd673b0a9 466 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site R615_RS13420 29c7e460e45749a5039c1a3cd673b0a9 466 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 4 456 49.253 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 R615_RS13420 29c7e460e45749a5039c1a3cd673b0a9 466 PANTHER PTHR24031 4 371 2.8E-189 T 22-04-2016 R615_RS13420 29c7e460e45749a5039c1a3cd673b0a9 466 SUPERFAMILY SSF52540 76 359 1.2E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13420 29c7e460e45749a5039c1a3cd673b0a9 466 Pfam PF00270 DEAD/DEAH box helicase 29 195 5.0E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS13420 29c7e460e45749a5039c1a3cd673b0a9 466 SMART SM00490 260 341 2.5E-31 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS13420 29c7e460e45749a5039c1a3cd673b0a9 466 PANTHER PTHR24031:SF0 4 371 2.8E-189 T 22-04-2016 R615_RS13420 29c7e460e45749a5039c1a3cd673b0a9 466 Pfam PF00271 Helicase conserved C-terminal domain 233 341 6.8E-26 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS13420 29c7e460e45749a5039c1a3cd673b0a9 466 Gene3D G3DSA:3.40.50.300 220 375 2.7E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14900 9719711d138713dfb7328a343b10bd61 936 PANTHER PTHR22773 1 524 1.0E-212 T 22-04-2016 R615_RS14900 9719711d138713dfb7328a343b10bd61 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 3.5E-36 T 22-04-2016 R615_RS14900 9719711d138713dfb7328a343b10bd61 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 3.5E-36 T 22-04-2016 R615_RS14900 9719711d138713dfb7328a343b10bd61 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 3.5E-36 T 22-04-2016 R615_RS14900 9719711d138713dfb7328a343b10bd61 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 3.5E-36 T 22-04-2016 R615_RS14900 9719711d138713dfb7328a343b10bd61 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 3.5E-36 T 22-04-2016 R615_RS14900 9719711d138713dfb7328a343b10bd61 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 3.5E-36 T 22-04-2016 R615_RS14900 9719711d138713dfb7328a343b10bd61 936 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 3.5E-36 T 22-04-2016 R615_RS14900 9719711d138713dfb7328a343b10bd61 936 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 113 5.0E-9 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal R615_RS14900 9719711d138713dfb7328a343b10bd61 936 Pfam PF00361 Proton-conducting membrane transporter 126 402 2.6E-66 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 R615_RS14900 9719711d138713dfb7328a343b10bd61 936 Pfam PF13244 Domain of unknown function (DUF4040) 609 674 2.7E-18 T 22-04-2016 IPR025383 Domain of unknown function DUF4040 R615_RS14900 9719711d138713dfb7328a343b10bd61 936 PANTHER PTHR22773:SF46 1 524 1.0E-212 T 22-04-2016 R615_RS14900 9719711d138713dfb7328a343b10bd61 936 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 790 911 7.1E-34 T 22-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 Pfam PF02540 NAD synthase 217 295 3.5E-8 T 22-04-2016 IPR022310 NAD/GMP synthase R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 SUPERFAMILY SSF54810 406 526 2.62E-50 T 22-04-2016 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 SUPERFAMILY SSF52317 5 205 1.43E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 Pfam PF00958 GMP synthase C terminal domain 434 525 2.0E-41 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 PANTHER PTHR11922 1 523 1.4E-284 T 22-04-2016 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 Gene3D G3DSA:3.40.50.620 225 400 4.4E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 214 526 3.7E-150 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 Gene3D G3DSA:3.30.300.10 402 526 1.1E-52 T 22-04-2016 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 526 55.684 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.3E-5 T 22-04-2016 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.3E-5 T 22-04-2016 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 PRINTS PR00097 Anthranilate synthase component II signature 178 191 1.3E-5 T 22-04-2016 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 SUPERFAMILY SSF52402 198 421 1.87E-57 T 22-04-2016 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 PANTHER PTHR11922:SF2 1 523 1.4E-284 T 22-04-2016 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 Gene3D G3DSA:3.40.50.880 6 224 1.8E-60 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 9.8E-7 T 22-04-2016 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 9.8E-7 T 22-04-2016 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 PRINTS PR00096 Glutamine amidotransferase superfamily signature 178 191 9.8E-7 T 22-04-2016 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 Pfam PF00117 Glutamine amidotransferase class-I 12 201 2.6E-38 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 R615_RS10905 a49fdb24157cbee217a39a15b6244dc0 526 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 206 7.8E-77 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 PIRSF PIRSF002158 10 275 3.5E-101 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 273 3.4E-131 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 Gene3D G3DSA:2.30.30.30 118 195 4.3E-32 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 3.4E-33 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 Gene3D G3DSA:4.10.950.10 196 272 8.5E-36 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 SMART SM01383 42 118 2.6E-46 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 SUPERFAMILY SSF50104 126 272 1.38E-60 T 22-04-2016 IPR008991 Translation protein SH3-like domain R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.482 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 SUPERFAMILY SSF50249 3 125 8.91E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 SMART SM01382 124 252 3.7E-90 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 7.7E-55 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 Gene3D G3DSA:2.40.50.140 1 114 4.8E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS15860 2a3f9c1bf5a3bba6f435a3e30a1abb24 275 PANTHER PTHR13691 1 274 5.5E-147 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS13565 54051055014dbd0883ba3d295a8b8818 106 PANTHER PTHR10815:SF2 14 101 8.5E-32 T 22-04-2016 R615_RS13565 54051055014dbd0883ba3d295a8b8818 106 Gene3D G3DSA:1.10.10.10 13 96 2.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS13565 54051055014dbd0883ba3d295a8b8818 106 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 13 93 7.9E-21 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 R615_RS13565 54051055014dbd0883ba3d295a8b8818 106 SUPERFAMILY SSF46767 14 94 3.01E-21 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 R615_RS13565 54051055014dbd0883ba3d295a8b8818 106 PANTHER PTHR10815 14 101 8.5E-32 T 22-04-2016 R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 Pfam PF01966 HD domain 62 171 4.8E-10 T 22-04-2016 IPR006674 HD domain R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 PANTHER PTHR11373 149 186 2.0E-70 T 22-04-2016 R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 PANTHER PTHR11373 1 133 2.0E-70 T 22-04-2016 R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 Gene3D G3DSA:1.10.3210.10 1 113 7.1E-64 T 22-04-2016 IPR006674 HD domain R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 Gene3D G3DSA:1.10.3210.10 150 243 7.1E-64 T 22-04-2016 IPR006674 HD domain R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 SUPERFAMILY SSF109604 24 188 1.23E-69 T 22-04-2016 R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 SUPERFAMILY SSF109604 223 432 1.23E-69 T 22-04-2016 R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 PANTHER PTHR11373:SF29 149 186 2.0E-70 T 22-04-2016 R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 PANTHER PTHR11373:SF29 1 133 2.0E-70 T 22-04-2016 R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 SMART SM00471 58 254 6.6E-10 T 22-04-2016 IPR003607 HD/PDEase domain R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 Gene3D G3DSA:1.10.3410.10 244 350 1.5E-32 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 Gene3D G3DSA:1.10.3550.10 114 147 1.2E-28 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 Gene3D G3DSA:1.10.3550.10 351 438 1.2E-28 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain R615_RS11650 63f0dd64cb17d9eff1ed9e15be6958b8 444 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 435 1.0E-101 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 R615_RS04620 22c86411e40150c292e3a4cc1e03df41 149 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 149 2.3E-48 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 R615_RS04620 22c86411e40150c292e3a4cc1e03df41 149 Pfam PF00460 Flagella basal body rod protein 7 31 3.2E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 R615_RS04620 22c86411e40150c292e3a4cc1e03df41 149 PANTHER PTHR30435 1 149 3.0E-60 T 22-04-2016 R615_RS04620 22c86411e40150c292e3a4cc1e03df41 149 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site R615_RS04620 22c86411e40150c292e3a4cc1e03df41 149 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 102 147 1.0E-13 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain R615_RS04620 22c86411e40150c292e3a4cc1e03df41 149 PANTHER PTHR30435:SF2 1 149 3.0E-60 T 22-04-2016 R615_RS06085 352b094ebfed4d35d072a3b71d65915a 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 50.21 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 R615_RS06085 352b094ebfed4d35d072a3b71d65915a 360 PIRSF PIRSF000525 1 360 1.1E-152 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 R615_RS06085 352b094ebfed4d35d072a3b71d65915a 360 Gene3D G3DSA:3.90.1150.10 258 359 9.8E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS06085 352b094ebfed4d35d072a3b71d65915a 360 PANTHER PTHR21152 1 359 3.0E-182 T 22-04-2016 R615_RS06085 352b094ebfed4d35d072a3b71d65915a 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 6.6E-156 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 R615_RS06085 352b094ebfed4d35d072a3b71d65915a 360 SUPERFAMILY SSF53383 1 358 8.14E-118 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS06085 352b094ebfed4d35d072a3b71d65915a 360 PANTHER PTHR21152:SF1 1 359 3.0E-182 T 22-04-2016 R615_RS06085 352b094ebfed4d35d072a3b71d65915a 360 Pfam PF00266 Aminotransferase class-V 4 348 6.2E-58 T 22-04-2016 IPR000192 Aminotransferase class V domain R615_RS06085 352b094ebfed4d35d072a3b71d65915a 360 Gene3D G3DSA:3.40.640.10 17 257 1.3E-107 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS03080 24c31a0d33413aafae2873475acdc0f7 328 SUPERFAMILY SSF55073 176 308 7.45E-15 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS03080 24c31a0d33413aafae2873475acdc0f7 328 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 309 2.2E-16 T 22-04-2016 IPR000160 GGDEF domain R615_RS03080 24c31a0d33413aafae2873475acdc0f7 328 SMART SM00267 159 326 2.6E-7 T 22-04-2016 IPR000160 GGDEF domain R615_RS03080 24c31a0d33413aafae2873475acdc0f7 328 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 168 319 7.9E-15 T 22-04-2016 IPR000160 GGDEF domain R615_RS03080 24c31a0d33413aafae2873475acdc0f7 328 Gene3D G3DSA:3.30.70.270 172 318 1.1E-18 T 22-04-2016 R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 SMART SM00487 18 214 1.1E-24 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 Gene3D G3DSA:3.40.50.300 8 194 1.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 Pfam PF00270 DEAD/DEAH box helicase 25 185 1.2E-15 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 Gene3D G3DSA:1.10.10.10 530 661 3.7E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 13 351 8.6E-108 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 PANTHER PTHR13710:SF81 528 662 1.5E-152 T 22-04-2016 R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 PANTHER PTHR13710:SF81 13 353 1.5E-152 T 22-04-2016 R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 Pfam PF00271 Helicase conserved C-terminal domain 241 334 2.2E-16 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 Gene3D G3DSA:3.40.50.300 204 344 4.4E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 SMART SM00490 252 334 1.7E-26 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 SUPERFAMILY SSF52540 63 345 3.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 137 146 - T 22-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 PANTHER PTHR13710 528 662 1.5E-152 T 22-04-2016 R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 PANTHER PTHR13710 13 353 1.5E-152 T 22-04-2016 R615_RS01540 f6b0fa9e19b52f9123b49c9ff8d5f3bc 662 Pfam PF16124 RecQ zinc-binding 530 575 1.2E-7 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain R615_RS09360 d6f391e85141143e209e405ba260573a 280 SUPERFAMILY SSF52540 12 245 6.54E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09360 d6f391e85141143e209e405ba260573a 280 Gene3D G3DSA:3.40.50.300 18 201 3.3E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09360 d6f391e85141143e209e405ba260573a 280 SMART SM00382 25 183 7.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS09360 d6f391e85141143e209e405ba260573a 280 PANTHER PTHR22908 1 235 3.0E-76 T 22-04-2016 R615_RS09360 d6f391e85141143e209e405ba260573a 280 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 173 1.9E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS06910 489053c266bb98cca37b4d4e485a0d4b 277 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 265 2.4E-116 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 R615_RS06910 489053c266bb98cca37b4d4e485a0d4b 277 Gene3D G3DSA:3.90.550.10 1 270 6.3E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS06910 489053c266bb98cca37b4d4e485a0d4b 277 PANTHER PTHR22572:SF14 4 272 2.0E-91 T 22-04-2016 R615_RS06910 489053c266bb98cca37b4d4e485a0d4b 277 Pfam PF00483 Nucleotidyl transferase 10 268 2.8E-28 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 R615_RS06910 489053c266bb98cca37b4d4e485a0d4b 277 SUPERFAMILY SSF53448 1 272 6.76E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS06910 489053c266bb98cca37b4d4e485a0d4b 277 PANTHER PTHR22572 4 272 2.0E-91 T 22-04-2016 R615_RS10610 9b4344e6ed37eeb4c9a09e7572fb79fd 117 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 13 106 1.8E-24 T 22-04-2016 IPR009241 Toxin HigB-like R615_RS16120 72f429d4bec0d4e2f59339521a89b1c0 178 SUPERFAMILY SSF88874 1 172 5.89E-46 T 22-04-2016 R615_RS16120 72f429d4bec0d4e2f59339521a89b1c0 178 Gene3D G3DSA:3.90.1340.10 1 67 2.1E-29 T 22-04-2016 IPR011083 Phage tail collar domain R615_RS16120 72f429d4bec0d4e2f59339521a89b1c0 178 PANTHER PTHR34720 1 178 2.0E-57 T 22-04-2016 R615_RS16120 72f429d4bec0d4e2f59339521a89b1c0 178 Pfam PF07484 Phage Tail Collar Domain 7 62 5.7E-25 T 22-04-2016 IPR011083 Phage tail collar domain R615_RS13600 db638e90ffa9b28583f2ac20eecb5a44 504 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 258 444 1.5E-49 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 R615_RS13600 db638e90ffa9b28583f2ac20eecb5a44 504 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 478 2.8E-133 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 R615_RS13600 db638e90ffa9b28583f2ac20eecb5a44 504 Gene3D G3DSA:3.40.50.880 257 453 4.2E-25 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS13600 db638e90ffa9b28583f2ac20eecb5a44 504 PANTHER PTHR21343 7 492 5.6E-207 T 22-04-2016 R615_RS13600 db638e90ffa9b28583f2ac20eecb5a44 504 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 228 1.3E-26 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain R615_RS13600 db638e90ffa9b28583f2ac20eecb5a44 504 Gene3D G3DSA:3.40.50.300 7 239 3.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13600 db638e90ffa9b28583f2ac20eecb5a44 504 PANTHER PTHR21343:SF1 7 492 5.6E-207 T 22-04-2016 R615_RS13600 db638e90ffa9b28583f2ac20eecb5a44 504 SUPERFAMILY SSF52317 260 454 7.84E-36 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS13600 db638e90ffa9b28583f2ac20eecb5a44 504 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 495 183.399 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 R615_RS13600 db638e90ffa9b28583f2ac20eecb5a44 504 SUPERFAMILY SSF52540 7 239 5.31E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 SUPERFAMILY SSF53738 256 363 1.29E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 371 439 3.7E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 PANTHER PTHR22573:SF15 2 443 4.9E-161 T 22-04-2016 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 Gene3D G3DSA:3.40.120.10 174 248 3.1E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 SUPERFAMILY SSF55957 356 443 1.07E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 Gene3D G3DSA:3.40.120.10 249 366 1.5E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 Gene3D G3DSA:3.40.120.10 3 151 8.2E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 Gene3D G3DSA:3.30.310.50 367 442 1.8E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 SUPERFAMILY SSF53738 155 254 3.26E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 442 46.803 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 PANTHER PTHR22573 2 443 4.9E-161 T 22-04-2016 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 252 2.6E-18 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 440 8.9E-187 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 131 5.7E-43 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 362 7.9E-29 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.7E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 2.7E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 172 191 2.7E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS03915 e89485dd8ccd8ccc744ce077cc9bc3aa 444 SUPERFAMILY SSF53738 2 179 2.9E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS14935 db062221abae16aefbad4d6f70c18411 169 SUPERFAMILY SSF52540 2 166 2.36E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14935 db062221abae16aefbad4d6f70c18411 169 Pfam PF01202 Shikimate kinase 10 166 2.7E-54 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS14935 db062221abae16aefbad4d6f70c18411 169 PANTHER PTHR21087 1 166 1.7E-66 T 22-04-2016 R615_RS14935 db062221abae16aefbad4d6f70c18411 169 ProSitePatterns PS01128 Shikimate kinase signature. 57 82 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS14935 db062221abae16aefbad4d6f70c18411 169 PRINTS PR01100 Shikimate kinase family signature 95 112 2.6E-26 T 22-04-2016 R615_RS14935 db062221abae16aefbad4d6f70c18411 169 PRINTS PR01100 Shikimate kinase family signature 74 83 2.6E-26 T 22-04-2016 R615_RS14935 db062221abae16aefbad4d6f70c18411 169 PRINTS PR01100 Shikimate kinase family signature 4 19 2.6E-26 T 22-04-2016 R615_RS14935 db062221abae16aefbad4d6f70c18411 169 PRINTS PR01100 Shikimate kinase family signature 56 64 2.6E-26 T 22-04-2016 R615_RS14935 db062221abae16aefbad4d6f70c18411 169 PRINTS PR01100 Shikimate kinase family signature 28 41 2.6E-26 T 22-04-2016 R615_RS14935 db062221abae16aefbad4d6f70c18411 169 Gene3D G3DSA:3.40.50.300 1 167 4.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14935 db062221abae16aefbad4d6f70c18411 169 Hamap MF_00109 Shikimate kinase [aroK]. 1 167 28.647 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS01205 f1c6fd55069533c625a6027db4211a80 185 PANTHER PTHR30327:SF1 1 185 1.4E-52 T 22-04-2016 R615_RS01205 f1c6fd55069533c625a6027db4211a80 185 Gene3D G3DSA:3.40.1740.10 129 174 4.0E-31 T 22-04-2016 R615_RS01205 f1c6fd55069533c625a6027db4211a80 185 Gene3D G3DSA:3.40.1740.10 2 44 4.0E-31 T 22-04-2016 R615_RS01205 f1c6fd55069533c625a6027db4211a80 185 PANTHER PTHR30327 1 185 1.4E-52 T 22-04-2016 R615_RS01205 f1c6fd55069533c625a6027db4211a80 185 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 5 185 34.48 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 R615_RS01205 f1c6fd55069533c625a6027db4211a80 185 Pfam PF02622 Uncharacterized ACR, COG1678 16 172 2.8E-47 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 R615_RS01205 f1c6fd55069533c625a6027db4211a80 185 Gene3D G3DSA:3.30.70.1300 45 128 7.1E-25 T 22-04-2016 R615_RS01205 f1c6fd55069533c625a6027db4211a80 185 SUPERFAMILY SSF143456 5 185 1.31E-60 T 22-04-2016 R615_RS05600 838f62787818f244323df5412cfabc64 117 Gene3D G3DSA:1.10.260.40 63 116 5.9E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS05600 838f62787818f244323df5412cfabc64 117 Pfam PF01381 Helix-turn-helix 63 114 7.6E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS05600 838f62787818f244323df5412cfabc64 117 SMART SM00530 60 115 2.6E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS05600 838f62787818f244323df5412cfabc64 117 SUPERFAMILY SSF47413 62 115 1.25E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS08250 9f6ed3d37b12a0adf69bbff43d60af67 330 PANTHER PTHR11695:SF13 17 330 9.5E-123 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI R615_RS08250 9f6ed3d37b12a0adf69bbff43d60af67 330 PANTHER PTHR11695 17 330 9.5E-123 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 R615_RS08250 9f6ed3d37b12a0adf69bbff43d60af67 330 Gene3D G3DSA:3.90.180.10 8 88 1.2E-7 T 22-04-2016 IPR011032 GroES-like R615_RS08250 9f6ed3d37b12a0adf69bbff43d60af67 330 Pfam PF00107 Zinc-binding dehydrogenase 160 273 8.7E-15 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 R615_RS08250 9f6ed3d37b12a0adf69bbff43d60af67 330 SMART SM00829 14 325 1.3E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 R615_RS08250 9f6ed3d37b12a0adf69bbff43d60af67 330 Gene3D G3DSA:3.40.50.720 127 293 2.4E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08250 9f6ed3d37b12a0adf69bbff43d60af67 330 SUPERFAMILY SSF51735 118 283 3.64E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08250 9f6ed3d37b12a0adf69bbff43d60af67 330 SUPERFAMILY SSF50129 5 146 2.04E-37 T 22-04-2016 IPR011032 GroES-like R615_RS08250 9f6ed3d37b12a0adf69bbff43d60af67 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 87 1.2E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 R615_RS08250 9f6ed3d37b12a0adf69bbff43d60af67 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 326 2.4E-122 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 156 242 4.4E-17 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 11 117 2.0E-27 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 PANTHER PTHR11451:SF35 244 260 1.2E-88 T 22-04-2016 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 PANTHER PTHR11451:SF35 1 221 1.2E-88 T 22-04-2016 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 27 38 1.4E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 13 25 1.4E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 194 1.4E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 42 55 1.4E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 170 180 1.4E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 Gene3D G3DSA:3.90.800.10 76 170 2.2E-14 T 22-04-2016 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 10 290 39.254 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 10 270 3.7E-105 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 Gene3D G3DSA:3.40.50.620 10 75 1.9E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 Gene3D G3DSA:3.40.50.620 172 220 1.9E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 SUPERFAMILY SSF52374 10 281 1.38E-80 T 22-04-2016 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 PANTHER PTHR11451 244 260 1.2E-88 T 22-04-2016 R615_RS02580 241489cd7229b4bc7f215f0c1253df55 299 PANTHER PTHR11451 1 221 1.2E-88 T 22-04-2016 R615_RS16380 f4bb9a4a1ac9f9abd6d08ef9df5a435e 422 SUPERFAMILY SSF111352 10 397 1.44E-99 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 R615_RS16380 f4bb9a4a1ac9f9abd6d08ef9df5a435e 422 Pfam PF00909 Ammonium Transporter Family 17 416 1.2E-94 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 R615_RS16380 f4bb9a4a1ac9f9abd6d08ef9df5a435e 422 Gene3D G3DSA:1.10.3430.10 25 413 3.9E-105 T 22-04-2016 IPR029020 Ammonium/urea transporter R615_RS16380 f4bb9a4a1ac9f9abd6d08ef9df5a435e 422 PANTHER PTHR11730:SF6 1 85 1.0E-133 T 22-04-2016 R615_RS16380 f4bb9a4a1ac9f9abd6d08ef9df5a435e 422 PANTHER PTHR11730:SF6 102 422 1.0E-133 T 22-04-2016 R615_RS16380 f4bb9a4a1ac9f9abd6d08ef9df5a435e 422 PANTHER PTHR11730 1 85 1.0E-133 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 R615_RS16380 f4bb9a4a1ac9f9abd6d08ef9df5a435e 422 PANTHER PTHR11730 102 422 1.0E-133 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 R615_RS16380 f4bb9a4a1ac9f9abd6d08ef9df5a435e 422 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 10 419 4.0E-206 T 22-04-2016 IPR019879 Ammonium transporter, marine subtype R615_RS16380 f4bb9a4a1ac9f9abd6d08ef9df5a435e 422 ProSitePatterns PS01219 Ammonium transporters signature. 177 202 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 369 3.5E-106 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PRINTS PR01900 YidC translocation/secretion protein signature 485 500 1.2E-28 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PRINTS PR01900 YidC translocation/secretion protein signature 504 528 1.2E-28 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PRINTS PR01900 YidC translocation/secretion protein signature 356 372 1.2E-28 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 551 24.59 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PANTHER PTHR12428 187 552 4.4E-120 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 Pfam PF14849 YidC periplasmic domain 86 360 9.8E-82 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 Pfam PF02096 60Kd inner membrane protein 371 549 2.3E-60 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PANTHER PTHR12428:SF14 187 552 4.4E-120 T 22-04-2016 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 370 549 9.7E-72 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PRINTS PR00701 60kDa inner membrane protein signature 91 112 7.0E-85 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PRINTS PR00701 60kDa inner membrane protein signature 515 538 7.0E-85 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PRINTS PR00701 60kDa inner membrane protein signature 269 284 7.0E-85 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PRINTS PR00701 60kDa inner membrane protein signature 479 501 7.0E-85 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PRINTS PR00701 60kDa inner membrane protein signature 180 200 7.0E-85 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PRINTS PR00701 60kDa inner membrane protein signature 2 23 7.0E-85 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PRINTS PR00701 60kDa inner membrane protein signature 236 254 7.0E-85 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PRINTS PR00701 60kDa inner membrane protein signature 341 361 7.0E-85 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS17150 67a5e46121961678d72f4c1c5ce5546b 554 PRINTS PR00701 60kDa inner membrane protein signature 432 455 7.0E-85 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 R615_RS13145 2142ab8c232579f0319a014511956e1e 572 SUPERFAMILY SSF56519 57 221 5.36E-38 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 R615_RS13145 2142ab8c232579f0319a014511956e1e 572 Gene3D G3DSA:3.40.710.10 232 552 8.5E-88 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS13145 2142ab8c232579f0319a014511956e1e 572 Gene3D G3DSA:3.90.1310.10 131 231 6.3E-27 T 22-04-2016 R615_RS13145 2142ab8c232579f0319a014511956e1e 572 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 210 4.7E-17 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 R615_RS13145 2142ab8c232579f0319a014511956e1e 572 PANTHER PTHR30627 2 562 2.3E-191 T 22-04-2016 R615_RS13145 2142ab8c232579f0319a014511956e1e 572 SUPERFAMILY SSF56601 177 563 1.43E-92 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS13145 2142ab8c232579f0319a014511956e1e 572 PANTHER PTHR30627:SF1 2 562 2.3E-191 T 22-04-2016 R615_RS13145 2142ab8c232579f0319a014511956e1e 572 Pfam PF00905 Penicillin binding protein transpeptidase domain 250 546 2.4E-71 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 R615_RS16400 17d7badb7f4f8e7191e99e197efb5213 232 PANTHER PTHR24220:SF404 3 232 2.5E-117 T 22-04-2016 R615_RS16400 17d7badb7f4f8e7191e99e197efb5213 232 Pfam PF00005 ABC transporter 18 160 2.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS16400 17d7badb7f4f8e7191e99e197efb5213 232 PANTHER PTHR24220 3 232 2.5E-117 T 22-04-2016 R615_RS16400 17d7badb7f4f8e7191e99e197efb5213 232 SMART SM00382 26 210 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS16400 17d7badb7f4f8e7191e99e197efb5213 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 7.0E-102 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE R615_RS16400 17d7badb7f4f8e7191e99e197efb5213 232 SUPERFAMILY SSF52540 1 224 6.85E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16400 17d7badb7f4f8e7191e99e197efb5213 232 Gene3D G3DSA:3.40.50.300 1 227 6.9E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10850 56cc04160ca63b9d1a5c0298fdd2c99f 306 Pfam PF03881 Fructosamine kinase 45 304 1.6E-85 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase R615_RS10850 56cc04160ca63b9d1a5c0298fdd2c99f 306 PANTHER PTHR12149:SF8 48 304 4.1E-81 T 22-04-2016 R615_RS10850 56cc04160ca63b9d1a5c0298fdd2c99f 306 SUPERFAMILY SSF56112 49 301 2.04E-28 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS10850 56cc04160ca63b9d1a5c0298fdd2c99f 306 Gene3D G3DSA:3.90.1200.10 121 269 1.3E-13 T 22-04-2016 R615_RS10850 56cc04160ca63b9d1a5c0298fdd2c99f 306 PANTHER PTHR12149 48 304 4.1E-81 T 22-04-2016 R615_RS10850 56cc04160ca63b9d1a5c0298fdd2c99f 306 PIRSF PIRSF006221 22 306 3.9E-78 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase R615_RS15525 0207a3a5cfebcb0a48b9a2a6a6cd4bed 266 Pfam PF00005 ABC transporter 21 149 1.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS15525 0207a3a5cfebcb0a48b9a2a6a6cd4bed 266 Gene3D G3DSA:3.40.50.300 4 211 5.4E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15525 0207a3a5cfebcb0a48b9a2a6a6cd4bed 266 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS15525 0207a3a5cfebcb0a48b9a2a6a6cd4bed 266 SMART SM00382 30 198 1.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS15525 0207a3a5cfebcb0a48b9a2a6a6cd4bed 266 PANTHER PTHR24220:SF466 7 242 2.7E-101 T 22-04-2016 R615_RS15525 0207a3a5cfebcb0a48b9a2a6a6cd4bed 266 PANTHER PTHR24220 7 242 2.7E-101 T 22-04-2016 R615_RS15525 0207a3a5cfebcb0a48b9a2a6a6cd4bed 266 SUPERFAMILY SSF52540 4 216 5.51E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00730 6f92a9f7e7a5cd35ab29c81cbddcd2c0 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 12 221 5.5E-66 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 R615_RS00730 6f92a9f7e7a5cd35ab29c81cbddcd2c0 240 Pfam PF01895 PhoU domain 26 109 5.1E-22 T 22-04-2016 IPR026022 PhoU domain R615_RS00730 6f92a9f7e7a5cd35ab29c81cbddcd2c0 240 Pfam PF01895 PhoU domain 130 212 3.2E-16 T 22-04-2016 IPR026022 PhoU domain R615_RS00730 6f92a9f7e7a5cd35ab29c81cbddcd2c0 240 Gene3D G3DSA:1.20.58.220 125 237 4.0E-34 T 22-04-2016 R615_RS00730 6f92a9f7e7a5cd35ab29c81cbddcd2c0 240 PANTHER PTHR10010:SF14 1 229 6.6E-74 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 R615_RS00730 6f92a9f7e7a5cd35ab29c81cbddcd2c0 240 PIRSF PIRSF003107 6 227 3.5E-66 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 R615_RS00730 6f92a9f7e7a5cd35ab29c81cbddcd2c0 240 SUPERFAMILY SSF109755 12 230 2.83E-67 T 22-04-2016 R615_RS00730 6f92a9f7e7a5cd35ab29c81cbddcd2c0 240 Gene3D G3DSA:1.20.58.220 8 121 4.9E-34 T 22-04-2016 R615_RS00730 6f92a9f7e7a5cd35ab29c81cbddcd2c0 240 PANTHER PTHR10010 1 229 6.6E-74 T 22-04-2016 R615_RS13555 3c7b07945c0cce6f010c1da1a225e9a9 148 Gene3D G3DSA:1.10.1660.10 10 65 1.8E-15 T 22-04-2016 R615_RS13555 3c7b07945c0cce6f010c1da1a225e9a9 148 SMART SM00422 13 80 5.7E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS13555 3c7b07945c0cce6f010c1da1a225e9a9 148 SUPERFAMILY SSF46955 13 120 7.33E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain R615_RS13555 3c7b07945c0cce6f010c1da1a225e9a9 148 Gene3D G3DSA:1.10.1660.10 66 124 8.8E-12 T 22-04-2016 R615_RS13555 3c7b07945c0cce6f010c1da1a225e9a9 148 Pfam PF09278 MerR, DNA binding 54 120 1.3E-13 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding R615_RS13555 3c7b07945c0cce6f010c1da1a225e9a9 148 PANTHER PTHR30204 5 123 3.9E-13 T 22-04-2016 R615_RS05860 0206e9b3df2856a422c9346288a30141 209 PANTHER PTHR33508 1 209 3.3E-43 T 22-04-2016 R615_RS05860 0206e9b3df2856a422c9346288a30141 209 Pfam PF01914 MarC family integral membrane protein 6 204 4.1E-44 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 R615_RS05860 0206e9b3df2856a422c9346288a30141 209 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 200 2.0E-37 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 R615_RS10995 b86f0708d5f3e0acf891af99365ec3bf 480 PANTHER PTHR11046 3 474 4.3E-216 T 22-04-2016 R615_RS10995 b86f0708d5f3e0acf891af99365ec3bf 480 Gene3D G3DSA:3.30.420.10 2 194 3.1E-82 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS10995 b86f0708d5f3e0acf891af99365ec3bf 480 PANTHER PTHR11046:SF2 3 474 4.3E-216 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 R615_RS10995 b86f0708d5f3e0acf891af99365ec3bf 480 PIRSF PIRSF000977 1 478 1.0E-200 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 R615_RS10995 b86f0708d5f3e0acf891af99365ec3bf 480 SUPERFAMILY SSF53098 4 474 1.66E-127 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS10995 b86f0708d5f3e0acf891af99365ec3bf 480 Pfam PF08411 Exonuclease C-terminal 205 472 3.0E-96 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 R615_RS10995 b86f0708d5f3e0acf891af99365ec3bf 480 Pfam PF00929 Exonuclease 5 186 9.1E-27 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III R615_RS10995 b86f0708d5f3e0acf891af99365ec3bf 480 SMART SM00479 3 196 0.0019 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III R615_RS03845 32435cbfb3e18b136f07c85c2ed6987f 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 266 34.967 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS03845 32435cbfb3e18b136f07c85c2ed6987f 267 Gene3D G3DSA:3.40.50.720 1 164 1.5E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS03845 32435cbfb3e18b136f07c85c2ed6987f 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 6.4E-44 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS03845 32435cbfb3e18b136f07c85c2ed6987f 267 PIRSF PIRSF000161 1 267 5.5E-87 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS03845 32435cbfb3e18b136f07c85c2ed6987f 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 126 1.2E-37 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS03845 32435cbfb3e18b136f07c85c2ed6987f 267 SUPERFAMILY SSF55347 128 237 8.72E-38 T 22-04-2016 R615_RS03845 32435cbfb3e18b136f07c85c2ed6987f 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 2 266 2.9E-95 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS03845 32435cbfb3e18b136f07c85c2ed6987f 267 PANTHER PTHR20836 3 266 5.9E-92 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS03845 32435cbfb3e18b136f07c85c2ed6987f 267 PANTHER PTHR20836:SF0 3 266 5.9E-92 T 22-04-2016 R615_RS03845 32435cbfb3e18b136f07c85c2ed6987f 267 SUPERFAMILY SSF51735 237 266 3.39E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS03845 32435cbfb3e18b136f07c85c2ed6987f 267 SUPERFAMILY SSF51735 1 127 3.39E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS03845 32435cbfb3e18b136f07c85c2ed6987f 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 SUPERFAMILY SSF50985 777 920 6.02E-31 T 22-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 882 906 3.0E-8 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 837 860 1.9E-7 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 481 508 3.1E-5 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 582 610 2.3E-11 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 432 460 1.1E-11 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 268 295 8.7E-9 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 332 360 7.3E-13 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 731 759 3.1E-10 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 219 245 3.9E-8 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 532 560 1.2E-9 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 381 410 4.2E-10 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Gene3D G3DSA:2.130.10.30 480 775 3.4E-83 T 22-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Gene3D G3DSA:2.130.10.30 779 917 2.3E-29 T 22-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 PANTHER PTHR22870 262 298 5.5E-109 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 SUPERFAMILY SSF50985 139 375 1.31E-31 T 22-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 SUPERFAMILY SSF50985 530 774 1.74E-70 T 22-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Pfam PF00415 Regulator of chromosome condensation (RCC1) repeat 648 694 7.6E-11 T 22-04-2016 IPR000408 Regulator of chromosome condensation, RCC1 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 SUPERFAMILY SSF50985 316 563 3.66E-71 T 22-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 Gene3D G3DSA:2.130.10.30 195 479 1.0E-57 T 22-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 PANTHER PTHR22870:SF201 262 298 5.5E-109 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 PANTHER PTHR22870:SF201 527 714 5.5E-109 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 PANTHER PTHR22870:SF201 316 479 5.5E-109 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 500 516 1.8E-16 T 22-04-2016 IPR000408 Regulator of chromosome condensation, RCC1 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 481 494 1.8E-16 T 22-04-2016 IPR000408 Regulator of chromosome condensation, RCC1 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 584 600 1.8E-16 T 22-04-2016 IPR000408 Regulator of chromosome condensation, RCC1 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 687 705 1.8E-16 T 22-04-2016 IPR000408 Regulator of chromosome condensation, RCC1 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 449 465 1.8E-16 T 22-04-2016 IPR000408 Regulator of chromosome condensation, RCC1 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 PRINTS PR00633 Chromosome condensation regulator RCC1 signature 743 764 1.8E-16 T 22-04-2016 IPR000408 Regulator of chromosome condensation, RCC1 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 PANTHER PTHR22870 316 479 5.5E-109 T 22-04-2016 R615_RS02215 3d0540a3fba9feac04c65a7610b5bdd6 922 PANTHER PTHR22870 527 714 5.5E-109 T 22-04-2016 R615_RS02105 7d3702bfe72230bafa79f1af2ad3ee0b 318 PANTHER PTHR10846 19 312 5.6E-69 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 R615_RS02105 7d3702bfe72230bafa79f1af2ad3ee0b 318 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 6 310 1.2E-77 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 R615_RS02105 7d3702bfe72230bafa79f1af2ad3ee0b 318 Pfam PF01699 Sodium/calcium exchanger protein 171 314 1.0E-29 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 R615_RS02105 7d3702bfe72230bafa79f1af2ad3ee0b 318 Pfam PF01699 Sodium/calcium exchanger protein 7 144 6.8E-24 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 R615_RS15790 4d0081bedf4a3e14b4365f11562f1291 174 Pfam PF03719 Ribosomal protein S5, C-terminal domain 95 165 1.3E-31 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 R615_RS15790 4d0081bedf4a3e14b4365f11562f1291 174 Gene3D G3DSA:3.30.160.20 17 80 3.2E-30 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain R615_RS15790 4d0081bedf4a3e14b4365f11562f1291 174 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 171 34.516 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 R615_RS15790 4d0081bedf4a3e14b4365f11562f1291 174 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 171 1.8E-66 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 R615_RS15790 4d0081bedf4a3e14b4365f11562f1291 174 PANTHER PTHR13718 12 172 6.5E-77 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 R615_RS15790 4d0081bedf4a3e14b4365f11562f1291 174 Pfam PF00333 Ribosomal protein S5, N-terminal domain 19 83 4.3E-29 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS15790 4d0081bedf4a3e14b4365f11562f1291 174 ProSitePatterns PS00585 Ribosomal protein S5 signature. 36 68 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site R615_RS15790 4d0081bedf4a3e14b4365f11562f1291 174 SUPERFAMILY SSF54211 87 167 2.1E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS15790 4d0081bedf4a3e14b4365f11562f1291 174 Gene3D G3DSA:3.30.230.10 85 167 1.7E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS15790 4d0081bedf4a3e14b4365f11562f1291 174 SUPERFAMILY SSF54768 15 84 1.46E-23 T 22-04-2016 R615_RS00500 bbb795e4226b41403fad45e63931c73e 692 PANTHER PTHR11804:SF8 11 687 0.0 T 22-04-2016 R615_RS00500 bbb795e4226b41403fad45e63931c73e 692 Gene3D G3DSA:1.20.1050.40 20 148 4.9E-28 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal R615_RS00500 bbb795e4226b41403fad45e63931c73e 692 SUPERFAMILY SSF55486 12 685 1.1E-210 T 22-04-2016 R615_RS00500 bbb795e4226b41403fad45e63931c73e 692 Pfam PF01432 Peptidase family M3 232 685 1.4E-154 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 R615_RS00500 bbb795e4226b41403fad45e63931c73e 692 PANTHER PTHR11804 11 687 0.0 T 22-04-2016 R615_RS00500 bbb795e4226b41403fad45e63931c73e 692 Gene3D G3DSA:1.10.1370.10 513 686 2.5E-144 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 R615_RS00500 bbb795e4226b41403fad45e63931c73e 692 Gene3D G3DSA:1.10.1370.10 150 359 2.5E-144 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 R615_RS00500 bbb795e4226b41403fad45e63931c73e 692 Gene3D G3DSA:3.40.390.10 368 512 4.6E-57 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 Gene3D G3DSA:3.40.50.670 721 789 4.1E-100 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 Gene3D G3DSA:3.40.50.670 407 553 4.1E-100 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR01159 DNA gyrase subunit B signature 6 16 2.23E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR01159 DNA gyrase subunit B signature 363 377 2.23E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR01159 DNA gyrase subunit B signature 196 209 2.23E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR01159 DNA gyrase subunit B signature 181 196 2.23E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR01159 DNA gyrase subunit B signature 315 331 2.23E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR01159 DNA gyrase subunit B signature 473 482 2.23E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR01159 DNA gyrase subunit B signature 776 792 2.23E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR01159 DNA gyrase subunit B signature 760 772 2.23E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR01159 DNA gyrase subunit B signature 245 263 2.23E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR01159 DNA gyrase subunit B signature 377 397 2.23E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.23E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 Gene3D G3DSA:3.30.565.10 6 217 3.1E-90 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 SUPERFAMILY SSF56719 397 563 1.52E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 SUPERFAMILY SSF56719 733 798 1.52E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PANTHER PTHR10169 727 806 0.0 T 22-04-2016 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PANTHER PTHR10169 6 556 0.0 T 22-04-2016 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 Pfam PF01751 Toprim domain 422 534 1.5E-17 T 22-04-2016 IPR006171 Toprim domain R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 SUPERFAMILY SSF55874 6 218 3.27E-73 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 796 1.1E-30 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 Pfam PF00204 DNA gyrase B 221 393 2.0E-56 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 6 806 4.9E-297 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 ProSitePatterns PS00177 DNA topoisomerase II signature. 425 433 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR00418 DNA topoisomerase II family signature 508 525 2.24E-69 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR00418 DNA topoisomerase II family signature 528 540 2.24E-69 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR00418 DNA topoisomerase II family signature 271 284 2.24E-69 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR00418 DNA topoisomerase II family signature 739 755 2.24E-69 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR00418 DNA topoisomerase II family signature 71 84 2.24E-69 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR00418 DNA topoisomerase II family signature 490 506 2.24E-69 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR00418 DNA topoisomerase II family signature 36 51 2.24E-69 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR00418 DNA topoisomerase II family signature 423 437 2.24E-69 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 PRINTS PR00418 DNA topoisomerase II family signature 114 128 2.24E-69 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 SUPERFAMILY SSF54211 221 395 5.88E-56 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 3 807 100.878 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 Gene3D G3DSA:3.30.230.10 220 395 1.2E-70 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 SMART SM00387 32 176 7.5E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 SMART SM00433 36 800 3.7E-264 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00020 63c1e82991faca8a6b7ac0b1ec9f96e8 807 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 172 5.6E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 572 704 3.2E-43 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 Pfam PF09334 tRNA synthetases class I (M) 9 397 5.1E-156 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 SUPERFAMILY SSF57770 143 176 1.12E-11 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 PRINTS PR01041 Methionyl-tRNA synthetase signature 11 24 8.4E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 8.4E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 PRINTS PR01041 Methionyl-tRNA synthetase signature 252 263 8.4E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 PRINTS PR01041 Methionyl-tRNA synthetase signature 91 102 8.4E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 PRINTS PR01041 Methionyl-tRNA synthetase signature 43 57 8.4E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 8.4E-26 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 Gene3D G3DSA:2.20.28.20 146 177 4.0E-17 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 534 2.5E-179 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 SUPERFAMILY SSF50249 599 704 1.52E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 SUPERFAMILY SSF52374 6 142 2.94E-100 T 22-04-2016 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 SUPERFAMILY SSF52374 177 388 2.94E-100 T 22-04-2016 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 27 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 Gene3D G3DSA:3.40.50.620 184 380 1.2E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 Gene3D G3DSA:3.40.50.620 7 145 1.2E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 PANTHER PTHR11946:SF86 4 660 1.0E-236 T 22-04-2016 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 Gene3D G3DSA:2.40.50.140 596 704 2.0E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 Gene3D G3DSA:1.10.730.10 381 533 5.8E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 SUPERFAMILY SSF47323 390 543 1.79E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 PANTHER PTHR11946 4 660 1.0E-236 T 22-04-2016 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 Hamap MF_00098 Methionine--tRNA ligase [metG]. 7 545 39.199 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 R615_RS12280 a56127396b94f59436277eaa91c8b3ee 705 Pfam PF01588 Putative tRNA binding domain 609 702 1.5E-22 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 R615_RS15255 27cea489666e6e112a228b37988a430a 449 SUPERFAMILY SSF51556 58 373 9.68E-94 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS15255 27cea489666e6e112a228b37988a430a 449 Gene3D G3DSA:3.20.20.140 61 382 7.6E-106 T 22-04-2016 R615_RS15255 27cea489666e6e112a228b37988a430a 449 SUPERFAMILY SSF51338 1 73 3.98E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS15255 27cea489666e6e112a228b37988a430a 449 SUPERFAMILY SSF51338 333 447 5.18E-30 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS15255 27cea489666e6e112a228b37988a430a 449 PANTHER PTHR11271 20 448 1.9E-213 T 22-04-2016 R615_RS15255 27cea489666e6e112a228b37988a430a 449 Pfam PF01979 Amidohydrolase family 55 420 1.8E-64 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 R615_RS15255 27cea489666e6e112a228b37988a430a 449 PANTHER PTHR11271:SF37 20 448 1.9E-213 T 22-04-2016 R615_RS15255 27cea489666e6e112a228b37988a430a 449 Gene3D G3DSA:2.30.40.10 383 423 5.0E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS15255 27cea489666e6e112a228b37988a430a 449 Gene3D G3DSA:2.30.40.10 12 60 5.0E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS00070 cac967266f91804b5e66c4c1be11b9b1 269 Gene3D G3DSA:3.40.1130.10 75 237 8.1E-24 T 22-04-2016 R615_RS00070 cac967266f91804b5e66c4c1be11b9b1 269 SMART SM00563 88 202 5.2E-26 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS00070 cac967266f91804b5e66c4c1be11b9b1 269 PANTHER PTHR10434 6 251 3.9E-44 T 22-04-2016 R615_RS00070 cac967266f91804b5e66c4c1be11b9b1 269 SUPERFAMILY SSF69593 20 251 1.27E-36 T 22-04-2016 R615_RS00070 cac967266f91804b5e66c4c1be11b9b1 269 Pfam PF01553 Acyltransferase 73 199 3.7E-17 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 Gene3D G3DSA:3.40.50.1270 175 371 9.2E-82 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 PANTHER PTHR11406 1 386 6.2E-201 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 SUPERFAMILY SSF53748 4 383 8.24E-146 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 Pfam PF00162 Phosphoglycerate kinase 7 373 3.7E-141 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 Gene3D G3DSA:3.40.50.1260 5 174 6.8E-66 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.377 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.3E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.3E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.3E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.3E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.3E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.3E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.3E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.3E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.3E-83 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS15095 1bc710e78c28938e6bbf356fd9f54d3e 387 PIRSF PIRSF000724 1 387 6.2E-134 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 R615_RS05100 239eb9eba15b0257095cabac8e2b8170 459 PANTHER PTHR11564 242 428 3.2E-55 T 22-04-2016 R615_RS05100 239eb9eba15b0257095cabac8e2b8170 459 SMART SM00382 238 408 1.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS05100 239eb9eba15b0257095cabac8e2b8170 459 Pfam PF00448 SRP54-type protein, GTPase domain 242 427 6.4E-32 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS05100 239eb9eba15b0257095cabac8e2b8170 459 SUPERFAMILY SSF52540 236 428 5.44E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05100 239eb9eba15b0257095cabac8e2b8170 459 Gene3D G3DSA:3.40.50.300 241 427 2.1E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05100 239eb9eba15b0257095cabac8e2b8170 459 PANTHER PTHR11564:SF3 242 428 3.2E-55 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 R615_RS05100 239eb9eba15b0257095cabac8e2b8170 459 SMART SM00962 239 431 7.2E-39 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS05100 239eb9eba15b0257095cabac8e2b8170 459 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 327 1.4E-68 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 R615_RS05215 1e0b16e826217bb356f5a47e98a045c4 306 Gene3D G3DSA:3.40.190.10 90 181 2.8E-16 T 22-04-2016 R615_RS05215 1e0b16e826217bb356f5a47e98a045c4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS05215 1e0b16e826217bb356f5a47e98a045c4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS05215 1e0b16e826217bb356f5a47e98a045c4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS05215 1e0b16e826217bb356f5a47e98a045c4 306 Pfam PF03466 LysR substrate binding domain 88 294 5.5E-43 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS05215 1e0b16e826217bb356f5a47e98a045c4 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS05215 1e0b16e826217bb356f5a47e98a045c4 306 Gene3D G3DSA:3.40.190.10 182 260 9.8E-16 T 22-04-2016 R615_RS05215 1e0b16e826217bb356f5a47e98a045c4 306 SUPERFAMILY SSF46785 1 112 8.88E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05215 1e0b16e826217bb356f5a47e98a045c4 306 PANTHER PTHR30126:SF25 1 301 1.7E-140 T 22-04-2016 R615_RS05215 1e0b16e826217bb356f5a47e98a045c4 306 SUPERFAMILY SSF53850 89 294 8.55E-42 T 22-04-2016 R615_RS05215 1e0b16e826217bb356f5a47e98a045c4 306 Gene3D G3DSA:1.10.10.10 1 88 6.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05215 1e0b16e826217bb356f5a47e98a045c4 306 PANTHER PTHR30126 1 301 1.7E-140 T 22-04-2016 R615_RS08870 4572f558e6bec96ba55d4be0430abc65 246 PRINTS PR00126 ATP synthase gamma subunit signature 6 25 2.1E-16 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS08870 4572f558e6bec96ba55d4be0430abc65 246 PRINTS PR00126 ATP synthase gamma subunit signature 189 208 2.1E-16 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS08870 4572f558e6bec96ba55d4be0430abc65 246 PRINTS PR00126 ATP synthase gamma subunit signature 220 241 2.1E-16 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS08870 4572f558e6bec96ba55d4be0430abc65 246 Gene3D G3DSA:1.10.287.80 172 239 1.4E-20 T 22-04-2016 R615_RS08870 4572f558e6bec96ba55d4be0430abc65 246 SUPERFAMILY SSF52943 2 240 6.02E-36 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain R615_RS08870 4572f558e6bec96ba55d4be0430abc65 246 PANTHER PTHR11693 172 244 1.5E-16 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS08870 4572f558e6bec96ba55d4be0430abc65 246 Pfam PF00231 ATP synthase 5 240 1.6E-40 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS08870 4572f558e6bec96ba55d4be0430abc65 246 Gene3D G3DSA:3.40.1380.10 3 126 6.7E-11 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 Gene3D G3DSA:3.30.70.1430 574 660 5.3E-6 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 SUPERFAMILY SSF82693 567 663 5.75E-9 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 Gene3D G3DSA:3.30.2090.10 726 813 3.5E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 Gene3D G3DSA:1.10.3850.10 816 1032 1.8E-54 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 Gene3D G3DSA:1.10.3850.10 283 508 1.1E-45 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 Gene3D G3DSA:3.30.70.1430 42 142 1.7E-25 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 SUPERFAMILY SSF82866 300 506 1.57E-29 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.9E-18 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.9E-18 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.9E-18 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.9E-18 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.9E-18 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.9E-18 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 Gene3D G3DSA:3.30.2090.10 192 274 5.9E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 PANTHER PTHR32063:SF24 2 1040 0.0 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 SUPERFAMILY SSF82693 42 128 1.5E-19 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 SUPERFAMILY SSF82693 277 333 8.37E-19 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 SUPERFAMILY SSF82693 154 191 8.37E-19 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 SUPERFAMILY SSF82714 192 274 3.27E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 SUPERFAMILY SSF82714 725 810 3.92E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 PANTHER PTHR32063 2 1040 0.0 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 SUPERFAMILY SSF82866 810 1034 3.79E-54 T 22-04-2016 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1041 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 R615_RS08930 aa56ab39f48da98b929ad031a64d09cb 1046 Pfam PF00873 AcrB/AcrD/AcrF family 6 1029 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS14230 c902e10774b3793ac8170a4e28c67e22 590 SUPERFAMILY SSF55073 430 588 4.32E-46 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS14230 c902e10774b3793ac8170a4e28c67e22 590 SMART SM00267 414 589 2.5E-56 T 22-04-2016 IPR000160 GGDEF domain R615_RS14230 c902e10774b3793ac8170a4e28c67e22 590 Pfam PF07696 7TMR-DISM extracellular 2 24 154 7.4E-27 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 R615_RS14230 c902e10774b3793ac8170a4e28c67e22 590 PANTHER PTHR10799:SF710 226 378 1.4E-26 T 22-04-2016 R615_RS14230 c902e10774b3793ac8170a4e28c67e22 590 PANTHER PTHR10799:SF710 458 589 1.4E-26 T 22-04-2016 R615_RS14230 c902e10774b3793ac8170a4e28c67e22 590 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 421 588 8.6E-51 T 22-04-2016 IPR000160 GGDEF domain R615_RS14230 c902e10774b3793ac8170a4e28c67e22 590 PANTHER PTHR10799 226 378 1.4E-26 T 22-04-2016 R615_RS14230 c902e10774b3793ac8170a4e28c67e22 590 PANTHER PTHR10799 458 589 1.4E-26 T 22-04-2016 R615_RS14230 c902e10774b3793ac8170a4e28c67e22 590 Pfam PF07695 7TM diverse intracellular signalling 168 368 6.3E-32 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 R615_RS14230 c902e10774b3793ac8170a4e28c67e22 590 Gene3D G3DSA:3.30.70.270 427 588 4.1E-54 T 22-04-2016 R615_RS14230 c902e10774b3793ac8170a4e28c67e22 590 Pfam PF00990 Diguanylate cyclase, GGDEF domain 426 585 1.2E-44 T 22-04-2016 IPR000160 GGDEF domain R615_RS04275 b1440bf6c226c9203447c341cb3d6503 119 Gene3D G3DSA:3.30.780.10 40 119 5.3E-30 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 R615_RS04275 b1440bf6c226c9203447c341cb3d6503 119 Pfam PF01253 Translation initiation factor SUI1 43 112 5.9E-18 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 R615_RS04275 b1440bf6c226c9203447c341cb3d6503 119 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 10 119 3.3E-34 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 R615_RS04275 b1440bf6c226c9203447c341cb3d6503 119 SUPERFAMILY SSF55159 9 115 7.06E-28 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 R615_RS04275 b1440bf6c226c9203447c341cb3d6503 119 PANTHER PTHR12789 35 119 4.7E-22 T 22-04-2016 R615_RS04275 b1440bf6c226c9203447c341cb3d6503 119 PIRSF PIRSF037511 1 119 2.3E-35 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 R615_RS07115 52cb676ab43ac0ccc0db96a00757efa8 403 PANTHER PTHR30578:SF1 3 403 3.1E-234 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 R615_RS07115 52cb676ab43ac0ccc0db96a00757efa8 403 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 398 3.3E-182 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 R615_RS07115 52cb676ab43ac0ccc0db96a00757efa8 403 PIRSF PIRSF016055 1 403 1.2E-197 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 R615_RS07115 52cb676ab43ac0ccc0db96a00757efa8 403 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 402 37.324 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 R615_RS07115 52cb676ab43ac0ccc0db96a00757efa8 403 Pfam PF03116 NQR2, RnfD, RnfE family 41 395 3.0E-109 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 R615_RS07115 52cb676ab43ac0ccc0db96a00757efa8 403 PANTHER PTHR30578 3 403 3.1E-234 T 22-04-2016 R615_RS02510 d614837d42e0bd9d37aafdf33f19db41 265 SMART SM00460 159 219 4.6E-13 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS02510 d614837d42e0bd9d37aafdf33f19db41 265 PANTHER PTHR33490 1 245 1.8E-62 T 22-04-2016 R615_RS02510 d614837d42e0bd9d37aafdf33f19db41 265 SUPERFAMILY SSF54001 100 245 1.18E-35 T 22-04-2016 R615_RS02510 d614837d42e0bd9d37aafdf33f19db41 265 Gene3D G3DSA:3.90.260.10 164 227 2.3E-8 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS02510 d614837d42e0bd9d37aafdf33f19db41 265 Pfam PF01841 Transglutaminase-like superfamily 116 217 1.5E-22 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS02510 d614837d42e0bd9d37aafdf33f19db41 265 PANTHER PTHR33490:SF3 1 245 1.8E-62 T 22-04-2016 R615_RS00045 7243fbd10b518e9c9ab5e8e2da24b87d 262 Pfam PF00561 alpha/beta hydrolase fold 84 172 1.8E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS00045 7243fbd10b518e9c9ab5e8e2da24b87d 262 Gene3D G3DSA:3.40.50.1820 49 259 8.6E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS00045 7243fbd10b518e9c9ab5e8e2da24b87d 262 PANTHER PTHR12277 7 258 1.5E-31 T 22-04-2016 R615_RS00045 7243fbd10b518e9c9ab5e8e2da24b87d 262 SUPERFAMILY SSF53474 11 258 3.19E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS14100 93b0f4a378526c5d84a2cd1fc93472e9 228 Pfam PF00483 Nucleotidyl transferase 2 147 1.1E-21 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 R615_RS14100 93b0f4a378526c5d84a2cd1fc93472e9 228 PANTHER PTHR22572 2 228 4.2E-47 T 22-04-2016 R615_RS14100 93b0f4a378526c5d84a2cd1fc93472e9 228 SUPERFAMILY SSF53448 1 222 4.51E-55 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS14100 93b0f4a378526c5d84a2cd1fc93472e9 228 Gene3D G3DSA:3.90.550.10 1 225 7.1E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS17050 31d2ce5ee16c7910064b8d6a08df5272 804 PANTHER PTHR38344:SF1 14 802 3.3E-194 T 22-04-2016 R615_RS17050 31d2ce5ee16c7910064b8d6a08df5272 804 Hamap MF_01871 UPF0753 protein . 12 794 21.6 T 22-04-2016 IPR018752 Uncharacterised protein family UPF0753 R615_RS17050 31d2ce5ee16c7910064b8d6a08df5272 804 PANTHER PTHR38344 14 802 3.3E-194 T 22-04-2016 R615_RS17050 31d2ce5ee16c7910064b8d6a08df5272 804 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 17 779 2.9E-230 T 22-04-2016 IPR018752 Uncharacterised protein family UPF0753 R615_RS06125 edca10fcff4560467e04fe91f95976a5 237 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 64 77 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS06125 edca10fcff4560467e04fe91f95976a5 237 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 11 232 2.7E-53 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS06125 edca10fcff4560467e04fe91f95976a5 237 PANTHER PTHR32119 1 233 1.4E-109 T 22-04-2016 R615_RS06125 edca10fcff4560467e04fe91f95976a5 237 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 14 232 6.8E-60 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS06125 edca10fcff4560467e04fe91f95976a5 237 SUPERFAMILY SSF51366 9 234 1.95E-75 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 R615_RS06125 edca10fcff4560467e04fe91f95976a5 237 Gene3D G3DSA:3.20.20.70 10 234 6.2E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS06125 edca10fcff4560467e04fe91f95976a5 237 PANTHER PTHR32119:SF2 1 233 1.4E-109 T 22-04-2016 R615_RS06125 edca10fcff4560467e04fe91f95976a5 237 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 10 237 39.148 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS06125 edca10fcff4560467e04fe91f95976a5 237 SMART SM00934 12 232 3.8E-94 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS14525 2c55d6db8f68dbbce9a643f8bd50a3b0 158 Gene3D G3DSA:3.90.960.10 1 156 7.7E-58 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 R615_RS14525 2c55d6db8f68dbbce9a643f8bd50a3b0 158 SUPERFAMILY SSF55826 2 155 7.46E-45 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 R615_RS14525 2c55d6db8f68dbbce9a643f8bd50a3b0 158 Pfam PF04073 Aminoacyl-tRNA editing domain 24 145 8.4E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 R615_RS14525 2c55d6db8f68dbbce9a643f8bd50a3b0 158 PANTHER PTHR30411:SF0 1 156 2.5E-61 T 22-04-2016 R615_RS14525 2c55d6db8f68dbbce9a643f8bd50a3b0 158 PANTHER PTHR30411 1 156 2.5E-61 T 22-04-2016 R615_RS14525 2c55d6db8f68dbbce9a643f8bd50a3b0 158 PIRSF PIRSF006181 1 158 1.7E-51 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC R615_RS14525 2c55d6db8f68dbbce9a643f8bd50a3b0 158 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 4.7E-55 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC R615_RS14985 4ebba4eee6ee458ad89ad1cd741a1bbb 475 SUPERFAMILY SSF52540 242 466 1.29E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14985 4ebba4eee6ee458ad89ad1cd741a1bbb 475 Pfam PF00005 ABC transporter 22 155 1.3E-14 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS14985 4ebba4eee6ee458ad89ad1cd741a1bbb 475 Pfam PF00005 ABC transporter 266 417 2.0E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS14985 4ebba4eee6ee458ad89ad1cd741a1bbb 475 PANTHER PTHR24220 3 373 3.7E-92 T 22-04-2016 R615_RS14985 4ebba4eee6ee458ad89ad1cd741a1bbb 475 ProSitePatterns PS00211 ABC transporters family signature. 390 404 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS14985 4ebba4eee6ee458ad89ad1cd741a1bbb 475 Gene3D G3DSA:3.40.50.300 2 228 5.3E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14985 4ebba4eee6ee458ad89ad1cd741a1bbb 475 Gene3D G3DSA:3.40.50.300 244 456 1.3E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14985 4ebba4eee6ee458ad89ad1cd741a1bbb 475 SMART SM00382 26 227 0.0074 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS14985 4ebba4eee6ee458ad89ad1cd741a1bbb 475 SMART SM00382 274 468 7.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS14985 4ebba4eee6ee458ad89ad1cd741a1bbb 475 PANTHER PTHR24220:SF557 3 373 3.7E-92 T 22-04-2016 R615_RS14985 4ebba4eee6ee458ad89ad1cd741a1bbb 475 SUPERFAMILY SSF52540 2 230 3.95E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16220 78825f4712ba2c2481f8e9f69ab69706 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 197 1.0E-58 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 R615_RS16220 78825f4712ba2c2481f8e9f69ab69706 199 PANTHER PTHR11067:SF9 1 195 5.3E-77 T 22-04-2016 R615_RS16220 78825f4712ba2c2481f8e9f69ab69706 199 PANTHER PTHR11067 1 195 5.3E-77 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 R615_RS16220 78825f4712ba2c2481f8e9f69ab69706 199 SUPERFAMILY SSF52972 2 197 3.14E-67 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like R615_RS16220 78825f4712ba2c2481f8e9f69ab69706 199 Pfam PF01725 Ham1 family 5 195 1.4E-55 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 R615_RS16220 78825f4712ba2c2481f8e9f69ab69706 199 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 3 196 45.725 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 R615_RS16220 78825f4712ba2c2481f8e9f69ab69706 199 Gene3D G3DSA:3.90.950.10 2 197 1.1E-75 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like R615_RS15515 bff2b9912e884292969cdcef7433cfc1 275 Pfam PF01297 Zinc-uptake complex component A periplasmic 29 256 2.6E-26 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 R615_RS15515 bff2b9912e884292969cdcef7433cfc1 275 PANTHER PTHR30477:SF1 1 257 3.4E-35 T 22-04-2016 R615_RS15515 bff2b9912e884292969cdcef7433cfc1 275 PANTHER PTHR30477 1 257 3.4E-35 T 22-04-2016 R615_RS15515 bff2b9912e884292969cdcef7433cfc1 275 SUPERFAMILY SSF53807 22 261 7.36E-40 T 22-04-2016 R615_RS15515 bff2b9912e884292969cdcef7433cfc1 275 Gene3D G3DSA:3.40.50.1980 12 125 8.1E-16 T 22-04-2016 R615_RS15515 bff2b9912e884292969cdcef7433cfc1 275 Gene3D G3DSA:3.40.50.1980 162 270 5.7E-16 T 22-04-2016 R615_RS14515 735755a627b0953a3ee68be68bab6bf4 233 PANTHER PTHR34387:SF1 4 227 6.2E-21 T 22-04-2016 R615_RS14515 735755a627b0953a3ee68be68bab6bf4 233 PANTHER PTHR34387 4 227 6.2E-21 T 22-04-2016 R615_RS14515 735755a627b0953a3ee68be68bab6bf4 233 Pfam PF04402 Protein of unknown function (DUF541) 24 228 1.7E-34 T 22-04-2016 IPR007497 Protein of unknown function DUF541 R615_RS02935 169cf3b10b1150c776e61b537ad3bee8 117 Pfam PF08888 HopJ type III effector protein 9 113 4.6E-39 T 22-04-2016 IPR014984 HopJ type III effector protein R615_RS02935 169cf3b10b1150c776e61b537ad3bee8 117 Gene3D G3DSA:3.20.160.10 10 115 1.8E-39 T 22-04-2016 R615_RS00200 8a81c5ed75c3a5afb78cfcdbde8a5821 407 Gene3D G3DSA:1.20.140.10 236 404 1.8E-46 T 22-04-2016 R615_RS00200 8a81c5ed75c3a5afb78cfcdbde8a5821 407 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 246 395 2.7E-33 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS00200 8a81c5ed75c3a5afb78cfcdbde8a5821 407 PANTHER PTHR10909 1 407 1.2E-205 T 22-04-2016 R615_RS00200 8a81c5ed75c3a5afb78cfcdbde8a5821 407 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 129 6.5E-17 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS00200 8a81c5ed75c3a5afb78cfcdbde8a5821 407 SUPERFAMILY SSF47203 245 401 2.74E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS00200 8a81c5ed75c3a5afb78cfcdbde8a5821 407 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 234 1.0E-16 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 R615_RS00200 8a81c5ed75c3a5afb78cfcdbde8a5821 407 SUPERFAMILY SSF56645 1 259 9.29E-66 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 R615_RS00200 8a81c5ed75c3a5afb78cfcdbde8a5821 407 Gene3D G3DSA:1.10.540.10 1 131 2.5E-34 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS00200 8a81c5ed75c3a5afb78cfcdbde8a5821 407 PANTHER PTHR10909:SF282 1 407 1.2E-205 T 22-04-2016 R615_RS00200 8a81c5ed75c3a5afb78cfcdbde8a5821 407 Gene3D G3DSA:2.40.110.10 132 235 3.0E-34 T 22-04-2016 R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 144 415 1.0E-110 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 SMART SM00962 215 416 1.3E-122 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 389 402 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 Pfam PF00448 SRP54-type protein, GTPase domain 216 415 8.0E-77 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 PANTHER PTHR11564:SF16 109 422 5.4E-143 T 22-04-2016 R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 Gene3D G3DSA:3.40.50.300 212 415 2.2E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 Pfam PF02881 SRP54-type protein, helical bundle domain 131 196 2.1E-14 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 SUPERFAMILY SSF52540 212 416 1.19E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 PANTHER PTHR11564 109 422 5.4E-143 T 22-04-2016 R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 SMART SM00963 119 200 3.2E-27 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 SMART SM00382 214 421 4.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 Gene3D G3DSA:1.20.120.140 107 196 1.5E-31 T 22-04-2016 R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 SUPERFAMILY SSF47364 114 194 3.53E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS00675 97ae024a89fb245e4535475afc89c3e6 422 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 143 416 63.359 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 R615_RS14450 e81798c2b45593e080186e3188d17f1f 420 PIRSF PIRSF000412 1 420 5.1E-170 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 R615_RS14450 e81798c2b45593e080186e3188d17f1f 420 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 R615_RS14450 e81798c2b45593e080186e3188d17f1f 420 PANTHER PTHR11680:SF9 1 419 5.6E-301 T 22-04-2016 R615_RS14450 e81798c2b45593e080186e3188d17f1f 420 PANTHER PTHR11680 1 419 5.6E-301 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 R615_RS14450 e81798c2b45593e080186e3188d17f1f 420 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 420 52.997 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 R615_RS14450 e81798c2b45593e080186e3188d17f1f 420 Pfam PF00464 Serine hydroxymethyltransferase 9 386 7.0E-183 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 R615_RS14450 e81798c2b45593e080186e3188d17f1f 420 Gene3D G3DSA:3.40.640.10 37 284 6.8E-108 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS14450 e81798c2b45593e080186e3188d17f1f 420 Gene3D G3DSA:3.90.1150.10 285 420 2.8E-53 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS14450 e81798c2b45593e080186e3188d17f1f 420 SUPERFAMILY SSF53383 6 419 4.29E-184 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS04005 83cbec1ee1b77e19a1ea442a9bc38832 297 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 292 4.3E-55 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 R615_RS04005 83cbec1ee1b77e19a1ea442a9bc38832 297 SUPERFAMILY SSF53271 106 296 1.7E-23 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS04005 83cbec1ee1b77e19a1ea442a9bc38832 297 Gene3D G3DSA:3.40.50.2020 157 280 2.1E-19 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS04005 83cbec1ee1b77e19a1ea442a9bc38832 297 Gene3D G3DSA:3.40.50.2020 1 156 8.0E-26 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS04005 83cbec1ee1b77e19a1ea442a9bc38832 297 PANTHER PTHR10210 1 296 1.9E-44 T 22-04-2016 R615_RS04005 83cbec1ee1b77e19a1ea442a9bc38832 297 SMART SM01400 1 116 5.6E-29 T 22-04-2016 R615_RS04005 83cbec1ee1b77e19a1ea442a9bc38832 297 Pfam PF00156 Phosphoribosyl transferase domain 133 243 4.9E-12 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 R615_RS04005 83cbec1ee1b77e19a1ea442a9bc38832 297 PANTHER PTHR10210:SF32 1 296 1.9E-44 T 22-04-2016 R615_RS04005 83cbec1ee1b77e19a1ea442a9bc38832 297 SUPERFAMILY SSF53271 2 157 2.56E-32 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS04005 83cbec1ee1b77e19a1ea442a9bc38832 297 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 114 3.2E-16 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 Gene3D G3DSA:1.10.40.30 390 445 8.5E-32 T 22-04-2016 R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 2.5E-50 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 Gene3D G3DSA:1.20.200.10 120 389 4.0E-86 T 22-04-2016 R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 PANTHER PTHR11444:SF17 4 451 6.7E-299 T 22-04-2016 R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 453 7.8E-132 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 SUPERFAMILY SSF48557 4 447 7.23E-105 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 PANTHER PTHR11444 4 451 6.7E-299 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 2.5E-18 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.5E-18 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 2.5E-18 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.5E-18 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 Gene3D G3DSA:1.10.275.10 1 119 1.3E-49 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal R615_RS07960 4b827c64995384b8a1b8a3684c80b088 455 Pfam PF00206 Lyase 14 312 4.0E-64 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal R615_RS04905 40ec3dd6bbd3f866b784bf14cf38dca6 1317 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 108 5.0E-19 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 R615_RS04905 40ec3dd6bbd3f866b784bf14cf38dca6 1317 PANTHER PTHR30288:SF0 1228 1315 1.0E-42 T 22-04-2016 R615_RS04905 40ec3dd6bbd3f866b784bf14cf38dca6 1317 PANTHER PTHR30288:SF0 2 403 1.0E-42 T 22-04-2016 R615_RS04905 40ec3dd6bbd3f866b784bf14cf38dca6 1317 PANTHER PTHR30288 1228 1315 1.0E-42 T 22-04-2016 R615_RS04905 40ec3dd6bbd3f866b784bf14cf38dca6 1317 PANTHER PTHR30288 2 403 1.0E-42 T 22-04-2016 R615_RS04905 40ec3dd6bbd3f866b784bf14cf38dca6 1317 Pfam PF07196 Flagellin hook IN motif 162 197 3.5E-5 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 R615_RS04905 40ec3dd6bbd3f866b784bf14cf38dca6 1317 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 1227 1299 7.4E-7 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 R615_RS04905 40ec3dd6bbd3f866b784bf14cf38dca6 1317 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 242 406 4.3E-34 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 R615_RS10795 62e577bc6687341410e260a081be4049 304 PANTHER PTHR30040:SF2 1 284 4.2E-78 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 R615_RS10795 62e577bc6687341410e260a081be4049 304 PIRSF PIRSF006268 6 299 6.2E-69 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 R615_RS10795 62e577bc6687341410e260a081be4049 304 PANTHER PTHR30040 1 284 4.2E-78 T 22-04-2016 R615_RS10795 62e577bc6687341410e260a081be4049 304 Pfam PF02424 ApbE family 33 287 1.1E-72 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 R615_RS10795 62e577bc6687341410e260a081be4049 304 SUPERFAMILY SSF143631 9 285 1.15E-84 T 22-04-2016 IPR003374 ApbE-like domain R615_RS10060 2a59329910e8871c4c5dbfca3ddf0a22 94 PIRSF PIRSF029218 1 94 7.1E-29 T 22-04-2016 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 R615_RS10060 2a59329910e8871c4c5dbfca3ddf0a22 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 92 5.8E-17 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family R615_RS10060 2a59329910e8871c4c5dbfca3ddf0a22 94 PANTHER PTHR33755:SF2 1 93 1.6E-33 T 22-04-2016 R615_RS10060 2a59329910e8871c4c5dbfca3ddf0a22 94 PANTHER PTHR33755 1 93 1.6E-33 T 22-04-2016 R615_RS15390 ee765ea4cbd8cd873f6aaed8ca609176 166 Gene3D G3DSA:3.90.79.10 2 149 7.9E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS15390 ee765ea4cbd8cd873f6aaed8ca609176 166 PANTHER PTHR22769 1 162 1.7E-21 T 22-04-2016 R615_RS15390 ee765ea4cbd8cd873f6aaed8ca609176 166 SUPERFAMILY SSF55811 2 163 7.31E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS15390 ee765ea4cbd8cd873f6aaed8ca609176 166 Pfam PF00293 NUDIX domain 37 150 5.3E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 R615_RS15390 ee765ea4cbd8cd873f6aaed8ca609176 166 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 PANTHER PTHR12383 5 180 4.0E-80 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 PANTHER PTHR12383 202 261 4.0E-80 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 Pfam PF00717 Peptidase S24-like 83 164 4.8E-21 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 62 259 7.9E-46 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 Gene3D G3DSA:2.10.109.10 73 150 6.0E-50 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 Gene3D G3DSA:2.10.109.10 220 266 6.0E-50 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 SUPERFAMILY SSF51306 75 266 3.09E-61 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 PANTHER PTHR12383:SF27 5 180 4.0E-80 T 22-04-2016 R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 PANTHER PTHR12383:SF27 202 261 4.0E-80 T 22-04-2016 R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 ProSitePatterns PS00760 Signal peptidases I lysine active site. 142 154 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 77 93 8.7E-23 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 220 239 8.7E-23 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 140 152 8.7E-23 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 Pfam PF10502 Signal peptidase, peptidase S26 216 258 1.7E-5 T 22-04-2016 IPR019533 Peptidase S26 R615_RS11635 f07eb81f47192eb80bee6bdfa50ab3de 276 ProSitePatterns PS00761 Signal peptidases I signature 3. 225 238 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 R615_RS13670 aeae651a0f134c88d5282f1d05e48012 565 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 7 565 4.7E-261 T 22-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 R615_RS13670 aeae651a0f134c88d5282f1d05e48012 565 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 384 398 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 R615_RS13670 aeae651a0f134c88d5282f1d05e48012 565 PANTHER PTHR30258 7 563 4.0E-175 T 22-04-2016 R615_RS13670 aeae651a0f134c88d5282f1d05e48012 565 PANTHER PTHR30258:SF2 7 563 4.0E-175 T 22-04-2016 R615_RS13670 aeae651a0f134c88d5282f1d05e48012 565 SUPERFAMILY SSF52540 178 563 4.04E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13670 aeae651a0f134c88d5282f1d05e48012 565 Pfam PF00437 Type II/IV secretion system protein 189 456 5.1E-87 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 R615_RS13670 aeae651a0f134c88d5282f1d05e48012 565 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 11 143 7.0E-15 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 R615_RS13670 aeae651a0f134c88d5282f1d05e48012 565 Gene3D G3DSA:3.30.450.90 163 289 7.9E-52 T 22-04-2016 R615_RS13670 aeae651a0f134c88d5282f1d05e48012 565 Gene3D G3DSA:3.40.50.300 296 563 6.0E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13670 aeae651a0f134c88d5282f1d05e48012 565 SUPERFAMILY SSF160246 3 140 1.07E-33 T 22-04-2016 R615_RS01320 6f5badbf1ca8ee43e60e9bb8f44bc182 329 Gene3D G3DSA:1.10.8.300 210 317 2.0E-27 T 22-04-2016 R615_RS01320 6f5badbf1ca8ee43e60e9bb8f44bc182 329 SUPERFAMILY SSF52540 37 293 9.95E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01320 6f5badbf1ca8ee43e60e9bb8f44bc182 329 PIRSF PIRSF002849 2 323 4.6E-118 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted R615_RS01320 6f5badbf1ca8ee43e60e9bb8f44bc182 329 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 49 179 4.5E-61 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 R615_RS01320 6f5badbf1ca8ee43e60e9bb8f44bc182 329 PANTHER PTHR11603 14 321 4.6E-112 T 22-04-2016 R615_RS01320 6f5badbf1ca8ee43e60e9bb8f44bc182 329 Gene3D G3DSA:3.40.50.300 36 194 9.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01320 6f5badbf1ca8ee43e60e9bb8f44bc182 329 SMART SM00382 46 187 4.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS11620 90367ca17776b95990d335ef777af2bc 693 PANTHER PTHR22935:SF1 262 422 7.8E-19 T 22-04-2016 R615_RS11620 90367ca17776b95990d335ef777af2bc 693 Pfam PF05547 Immune inhibitor A peptidase M6 143 359 4.6E-11 T 22-04-2016 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 R615_RS11620 90367ca17776b95990d335ef777af2bc 693 PANTHER PTHR22935 262 422 7.8E-19 T 22-04-2016 R615_RS11620 90367ca17776b95990d335ef777af2bc 693 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 134 417 1.9E-44 T 22-04-2016 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 R615_RS11620 90367ca17776b95990d335ef777af2bc 693 Gene3D G3DSA:3.40.390.10 266 352 5.8E-6 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 R615_RS09520 7d289e088abf0f21f418ccba2b5dc7d2 529 Gene3D G3DSA:3.40.605.10 9 252 2.7E-72 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 R615_RS09520 7d289e088abf0f21f418ccba2b5dc7d2 529 PANTHER PTHR11699 10 493 1.8E-170 T 22-04-2016 R615_RS09520 7d289e088abf0f21f418ccba2b5dc7d2 529 Gene3D G3DSA:3.40.309.10 253 429 2.1E-60 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 R615_RS09520 7d289e088abf0f21f418ccba2b5dc7d2 529 PANTHER PTHR11699:SF46 10 493 1.8E-170 T 22-04-2016 R615_RS09520 7d289e088abf0f21f418ccba2b5dc7d2 529 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 266 277 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 R615_RS09520 7d289e088abf0f21f418ccba2b5dc7d2 529 Pfam PF00171 Aldehyde dehydrogenase family 10 463 7.0E-132 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 R615_RS09520 7d289e088abf0f21f418ccba2b5dc7d2 529 SUPERFAMILY SSF53720 9 465 6.02E-134 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 R615_RS09520 7d289e088abf0f21f418ccba2b5dc7d2 529 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 238 245 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 R615_RS16965 bbaa5d0a253e8b3c82c10fff7e7f3958 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 R615_RS16965 bbaa5d0a253e8b3c82c10fff7e7f3958 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 1.8E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 R615_RS16965 bbaa5d0a253e8b3c82c10fff7e7f3958 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 1.8E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 R615_RS16965 bbaa5d0a253e8b3c82c10fff7e7f3958 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 1.8E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 R615_RS16965 bbaa5d0a253e8b3c82c10fff7e7f3958 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 1.8E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 R615_RS16965 bbaa5d0a253e8b3c82c10fff7e7f3958 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.8E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 R615_RS16965 bbaa5d0a253e8b3c82c10fff7e7f3958 178 SUPERFAMILY SSF47928 3 106 7.59E-25 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain R615_RS16965 bbaa5d0a253e8b3c82c10fff7e7f3958 178 Gene3D G3DSA:1.10.520.20 2 106 1.4E-29 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain R615_RS16965 bbaa5d0a253e8b3c82c10fff7e7f3958 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 19.621 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 R615_RS16965 bbaa5d0a253e8b3c82c10fff7e7f3958 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 175 1.2E-46 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 R615_RS16965 bbaa5d0a253e8b3c82c10fff7e7f3958 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 1.2E-52 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 R615_RS16965 bbaa5d0a253e8b3c82c10fff7e7f3958 178 PANTHER PTHR11910 8 177 6.8E-49 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 R615_RS02945 07c6769f4a4c4cf49acdf8bfde7bade8 180 PANTHER PTHR14969 8 180 2.7E-28 T 22-04-2016 R615_RS02945 07c6769f4a4c4cf49acdf8bfde7bade8 180 Gene3D G3DSA:1.20.144.10 7 172 4.3E-40 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase R615_RS02945 07c6769f4a4c4cf49acdf8bfde7bade8 180 SMART SM00014 59 168 2.7E-19 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase R615_RS02945 07c6769f4a4c4cf49acdf8bfde7bade8 180 Pfam PF01569 PAP2 superfamily 65 172 8.0E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase R615_RS02945 07c6769f4a4c4cf49acdf8bfde7bade8 180 SUPERFAMILY SSF48317 8 172 2.88E-34 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase R615_RS00645 50f23902a1aad9127544597f91c26a87 205 Pfam PF07681 DoxX 27 111 8.8E-22 T 22-04-2016 IPR032808 DoxX family R615_RS00645 50f23902a1aad9127544597f91c26a87 205 PANTHER PTHR33452 163 196 1.4E-73 T 22-04-2016 R615_RS00645 50f23902a1aad9127544597f91c26a87 205 PANTHER PTHR33452 1 124 1.4E-73 T 22-04-2016 R615_RS00645 50f23902a1aad9127544597f91c26a87 205 PANTHER PTHR33452:SF5 163 196 1.4E-73 T 22-04-2016 R615_RS00645 50f23902a1aad9127544597f91c26a87 205 PANTHER PTHR33452:SF5 1 124 1.4E-73 T 22-04-2016 R615_RS16650 db59b7474d66d31cb0af7c75a9bade3f 230 Gene3D G3DSA:1.10.10.10 130 228 1.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS16650 db59b7474d66d31cb0af7c75a9bade3f 230 SMART SM00448 2 112 2.4E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS16650 db59b7474d66d31cb0af7c75a9bade3f 230 SUPERFAMILY SSF52172 3 127 2.42E-38 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS16650 db59b7474d66d31cb0af7c75a9bade3f 230 SMART SM00862 151 227 1.2E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS16650 db59b7474d66d31cb0af7c75a9bade3f 230 Gene3D G3DSA:3.40.50.2300 2 123 8.4E-38 T 22-04-2016 R615_RS16650 db59b7474d66d31cb0af7c75a9bade3f 230 Pfam PF00072 Response regulator receiver domain 4 113 4.5E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS16650 db59b7474d66d31cb0af7c75a9bade3f 230 PANTHER PTHR26402:SF292 2 229 3.9E-75 T 22-04-2016 R615_RS16650 db59b7474d66d31cb0af7c75a9bade3f 230 SUPERFAMILY SSF46894 130 228 2.15E-23 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS16650 db59b7474d66d31cb0af7c75a9bade3f 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 7.9E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS16650 db59b7474d66d31cb0af7c75a9bade3f 230 PANTHER PTHR26402 2 229 3.9E-75 T 22-04-2016 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 Gene3D G3DSA:1.10.8.60 785 860 2.9E-9 T 22-04-2016 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 Gene3D G3DSA:1.10.1780.10 2 139 4.0E-16 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 90 119 1.0 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 11 55 7.7E-5 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 Pfam PF07724 AAA domain (Cdc48 subfamily) 601 767 6.6E-38 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 PANTHER PTHR11638 151 856 0.0 T 22-04-2016 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 PANTHER PTHR11638 1 130 0.0 T 22-04-2016 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 Gene3D G3DSA:3.40.50.300 555 784 4.6E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 SMART SM00382 208 353 2.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 SMART SM00382 602 744 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 2 857 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 Gene3D G3DSA:1.10.8.60 354 435 1.3E-27 T 22-04-2016 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 774 851 3.9E-11 T 22-04-2016 IPR019489 Clp ATPase, C-terminal R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 Gene3D G3DSA:3.40.50.300 170 352 1.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 SUPERFAMILY SSF52540 169 508 6.95E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 669 1.6E-30 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 680 698 1.6E-30 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 606 624 1.6E-30 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 713 727 1.6E-30 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 345 1.4E-8 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 PANTHER PTHR11638:SF122 151 856 0.0 T 22-04-2016 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 PANTHER PTHR11638:SF122 1 130 0.0 T 22-04-2016 R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 SUPERFAMILY SSF52540 551 853 5.34E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 SMART SM01086 774 867 1.2E-9 T 22-04-2016 IPR019489 Clp ATPase, C-terminal R615_RS01715 ed26ab02affb8bd9cf6741cd7413dbfe 870 SUPERFAMILY SSF81923 2 118 1.26E-16 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 R615_RS10930 6a09862b3f777ff34841e4e59b24b041 458 PANTHER PTHR30008:SF0 6 456 8.5E-180 T 22-04-2016 R615_RS10930 6a09862b3f777ff34841e4e59b24b041 458 Pfam PF02601 Exonuclease VII, large subunit 130 441 9.2E-106 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 R615_RS10930 6a09862b3f777ff34841e4e59b24b041 458 PANTHER PTHR30008 6 456 8.5E-180 T 22-04-2016 R615_RS10930 6a09862b3f777ff34841e4e59b24b041 458 Pfam PF13742 OB-fold nucleic acid binding domain 14 106 4.4E-31 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 R615_RS10930 6a09862b3f777ff34841e4e59b24b041 458 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 15 358 6.9E-142 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 R615_RS10930 6a09862b3f777ff34841e4e59b24b041 458 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 11 444 30.209 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 R615_RS13100 7bb76505241a0fbca3ff75293fc4b9d2 260 Pfam PF08478 POTRA domain, FtsQ-type 62 125 2.8E-8 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type R615_RS13100 7bb76505241a0fbca3ff75293fc4b9d2 260 PANTHER PTHR35851 9 259 8.4E-26 T 22-04-2016 R615_RS13100 7bb76505241a0fbca3ff75293fc4b9d2 260 Pfam PF03799 Cell division protein FtsQ 134 244 1.7E-11 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB R615_RS13100 7bb76505241a0fbca3ff75293fc4b9d2 260 PANTHER PTHR35851:SF1 9 259 8.4E-26 T 22-04-2016 R615_RS13255 058302bf2f153b17292033be587934cb 127 PANTHER PTHR11715 1 127 7.7E-71 T 22-04-2016 IPR002930 Glycine cleavage system H-protein R615_RS13255 058302bf2f153b17292033be587934cb 127 SUPERFAMILY SSF51230 3 127 7.2E-46 T 22-04-2016 IPR011053 Single hybrid motif R615_RS13255 058302bf2f153b17292033be587934cb 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 32.302 T 22-04-2016 IPR002930 Glycine cleavage system H-protein R615_RS13255 058302bf2f153b17292033be587934cb 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site R615_RS13255 058302bf2f153b17292033be587934cb 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 1.5E-53 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 R615_RS13255 058302bf2f153b17292033be587934cb 127 Pfam PF01597 Glycine cleavage H-protein 8 126 6.6E-49 T 22-04-2016 IPR002930 Glycine cleavage system H-protein R615_RS13255 058302bf2f153b17292033be587934cb 127 Gene3D G3DSA:2.40.50.100 7 127 2.8E-52 T 22-04-2016 R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 SMART SM00267 258 434 1.1E-22 T 22-04-2016 IPR000160 GGDEF domain R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 415 1.1E-19 T 22-04-2016 IPR000160 GGDEF domain R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 PANTHER PTHR33121:SF10 447 686 1.2E-34 T 22-04-2016 R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 PANTHER PTHR33121 447 686 1.2E-34 T 22-04-2016 R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 Pfam PF13188 PAS domain 146 199 2.4E-6 T 22-04-2016 IPR000014 PAS domain R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 238 1.2E-9 T 22-04-2016 IPR000014 PAS domain R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 SUPERFAMILY SSF55073 274 423 3.53E-28 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 Pfam PF00563 EAL domain 450 684 8.0E-48 T 22-04-2016 IPR001633 EAL domain R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 SMART SM00091 145 211 7.8E-4 T 22-04-2016 IPR000014 PAS domain R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 Gene3D G3DSA:3.30.450.20 137 240 7.4E-11 T 22-04-2016 R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 SUPERFAMILY SSF141868 449 686 4.05E-46 T 22-04-2016 IPR001633 EAL domain R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 422 6.7E-24 T 22-04-2016 IPR000160 GGDEF domain R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 Gene3D G3DSA:3.20.20.450 447 686 2.1E-47 T 22-04-2016 IPR001633 EAL domain R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 SMART SM00052 447 690 1.5E-17 T 22-04-2016 IPR001633 EAL domain R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 Gene3D G3DSA:3.40.50.2300 8 108 8.8E-5 T 22-04-2016 R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 Gene3D G3DSA:3.30.70.270 271 423 5.1E-31 T 22-04-2016 R615_RS02330 b0aa90cdd20632cb240e7bd9afc6fbda 701 SUPERFAMILY SSF55785 132 246 7.15E-12 T 22-04-2016 IPR000014 PAS domain R615_RS09720 1c43ca62c09f1fcf91390660fed6c9e3 631 Gene3D G3DSA:3.40.50.980 65 240 6.3E-37 T 22-04-2016 R615_RS09720 1c43ca62c09f1fcf91390660fed6c9e3 631 PANTHER PTHR24095:SF160 1 622 0.0 T 22-04-2016 R615_RS09720 1c43ca62c09f1fcf91390660fed6c9e3 631 Gene3D G3DSA:3.40.50.980 241 400 1.9E-26 T 22-04-2016 R615_RS09720 1c43ca62c09f1fcf91390660fed6c9e3 631 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 588 1.6E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain R615_RS09720 1c43ca62c09f1fcf91390660fed6c9e3 631 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 55 5.0E-16 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 R615_RS09720 1c43ca62c09f1fcf91390660fed6c9e3 631 PANTHER PTHR24095 1 622 0.0 T 22-04-2016 R615_RS09720 1c43ca62c09f1fcf91390660fed6c9e3 631 Gene3D G3DSA:3.30.300.30 496 625 2.1E-23 T 22-04-2016 R615_RS09720 1c43ca62c09f1fcf91390660fed6c9e3 631 SUPERFAMILY SSF56801 3 622 9.29E-153 T 22-04-2016 R615_RS09720 1c43ca62c09f1fcf91390660fed6c9e3 631 Gene3D G3DSA:2.30.38.10 412 490 6.2E-8 T 22-04-2016 R615_RS09720 1c43ca62c09f1fcf91390660fed6c9e3 631 Pfam PF00501 AMP-binding enzyme 64 500 1.7E-80 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 R615_RS09720 1c43ca62c09f1fcf91390660fed6c9e3 631 ProSitePatterns PS00455 Putative AMP-binding domain signature. 236 247 - T 22-04-2016 IPR020845 AMP-binding, conserved site R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 SUPERFAMILY SSF88946 15 123 5.36E-39 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 PANTHER PTHR30376 4 284 6.3E-115 T 22-04-2016 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 Pfam PF04542 Sigma-70 region 2 54 123 1.4E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 Gene3D G3DSA:1.10.10.10 224 284 3.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 283 8.0E-121 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 Gene3D G3DSA:1.10.601.10 16 123 5.6E-35 T 22-04-2016 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 282 5.9E-34 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 50.763 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 SUPERFAMILY SSF88659 198 283 7.66E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.1E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.1E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 PRINTS PR00046 Major sigma-70 factor signature 78 91 1.1E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.1E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00690 49bdbde7bff7cf5b7daf961f2b9567fd 289 Pfam PF04545 Sigma-70, region 4 229 279 8.3E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS08130 1c353dc93a50cd9afe4cd5e5a887e44f 283 SUPERFAMILY SSF54001 85 264 1.26E-38 T 22-04-2016 R615_RS08130 1c353dc93a50cd9afe4cd5e5a887e44f 283 SMART SM00460 174 239 1.9E-20 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS08130 1c353dc93a50cd9afe4cd5e5a887e44f 283 PANTHER PTHR33490 3 264 2.4E-62 T 22-04-2016 R615_RS08130 1c353dc93a50cd9afe4cd5e5a887e44f 283 Pfam PF01841 Transglutaminase-like superfamily 145 237 3.8E-20 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS08130 1c353dc93a50cd9afe4cd5e5a887e44f 283 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 4 81 3.5E-20 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal R615_RS08130 1c353dc93a50cd9afe4cd5e5a887e44f 283 PANTHER PTHR33490:SF1 3 264 2.4E-62 T 22-04-2016 R615_RS08130 1c353dc93a50cd9afe4cd5e5a887e44f 283 Gene3D G3DSA:3.90.260.10 178 239 2.9E-10 T 22-04-2016 IPR002931 Transglutaminase-like R615_RS06255 f9e3d984ffb2612c402b270d208f8eb0 349 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 339 1.1E-37 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS06255 f9e3d984ffb2612c402b270d208f8eb0 349 Gene3D G3DSA:3.30.1330.10 22 170 4.9E-62 T 22-04-2016 IPR016188 PurM-like, N-terminal domain R615_RS06255 f9e3d984ffb2612c402b270d208f8eb0 349 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 47.258 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 R615_RS06255 f9e3d984ffb2612c402b270d208f8eb0 349 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 163 1.3E-14 T 22-04-2016 IPR016188 PurM-like, N-terminal domain R615_RS06255 f9e3d984ffb2612c402b270d208f8eb0 349 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 334 3.8E-146 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 R615_RS06255 f9e3d984ffb2612c402b270d208f8eb0 349 SUPERFAMILY SSF56042 171 338 2.24E-61 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS06255 f9e3d984ffb2612c402b270d208f8eb0 349 SUPERFAMILY SSF55326 7 170 3.89E-53 T 22-04-2016 R615_RS06255 f9e3d984ffb2612c402b270d208f8eb0 349 Gene3D G3DSA:3.90.650.10 171 341 6.8E-69 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS06255 f9e3d984ffb2612c402b270d208f8eb0 349 PANTHER PTHR10520 7 344 1.4E-223 T 22-04-2016 R615_RS08025 1240a2bff3e881ddcf8d4821a7123d99 416 PANTHER PTHR30489 8 416 1.7E-122 T 22-04-2016 R615_RS08025 1240a2bff3e881ddcf8d4821a7123d99 416 Pfam PF12704 MacB-like periplasmic core domain 31 213 2.3E-14 T 22-04-2016 IPR025857 MacB-like periplasmic core domain R615_RS08025 1240a2bff3e881ddcf8d4821a7123d99 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 8 416 9.1E-152 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 R615_RS08025 1240a2bff3e881ddcf8d4821a7123d99 416 PANTHER PTHR30489:SF8 8 416 1.7E-122 T 22-04-2016 R615_RS08025 1240a2bff3e881ddcf8d4821a7123d99 416 Pfam PF02687 FtsX-like permease family 276 409 2.7E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 R615_RS15990 93bac1b2db545ed2a9a9b6832e9a98ab 318 SUPERFAMILY SSF50037 269 315 1.33E-8 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal R615_RS15990 93bac1b2db545ed2a9a9b6832e9a98ab 318 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 206 4.9E-17 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 R615_RS15990 93bac1b2db545ed2a9a9b6832e9a98ab 318 PANTHER PTHR12835 4 315 2.3E-72 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 R615_RS15990 93bac1b2db545ed2a9a9b6832e9a98ab 318 SUPERFAMILY SSF46785 3 55 7.18E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS15990 93bac1b2db545ed2a9a9b6832e9a98ab 318 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 4 315 30.97 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 R615_RS15990 93bac1b2db545ed2a9a9b6832e9a98ab 318 Gene3D G3DSA:2.30.30.100 269 317 8.5E-14 T 22-04-2016 R615_RS15990 93bac1b2db545ed2a9a9b6832e9a98ab 318 SUPERFAMILY SSF55681 80 267 4.91E-55 T 22-04-2016 R615_RS15990 93bac1b2db545ed2a9a9b6832e9a98ab 318 Pfam PF08279 HTH domain 3 54 8.7E-11 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 R615_RS15990 93bac1b2db545ed2a9a9b6832e9a98ab 318 Pfam PF02237 Biotin protein ligase C terminal domain 271 314 1.1E-4 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 R615_RS15990 93bac1b2db545ed2a9a9b6832e9a98ab 318 Gene3D G3DSA:1.10.10.10 4 57 3.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS15990 93bac1b2db545ed2a9a9b6832e9a98ab 318 Gene3D G3DSA:3.30.930.10 79 267 2.5E-56 T 22-04-2016 R615_RS15990 93bac1b2db545ed2a9a9b6832e9a98ab 318 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 84 313 2.4E-58 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 R615_RS11770 d76fdc42baa02132bf87a0f4821e8bbf 1924 Gene3D G3DSA:2.60.40.740 359 478 1.0E-4 T 22-04-2016 IPR008456 Collagen binding domain GO:0005518 R615_RS11770 d76fdc42baa02132bf87a0f4821e8bbf 1924 Gene3D G3DSA:2.60.40.920 1014 1120 5.2E-4 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain R615_RS11770 d76fdc42baa02132bf87a0f4821e8bbf 1924 SUPERFAMILY SSF103088 747 857 1.22E-25 T 22-04-2016 IPR006665 OmpA-like domain R615_RS11770 d76fdc42baa02132bf87a0f4821e8bbf 1924 Gene3D G3DSA:3.30.1330.60 748 858 1.3E-26 T 22-04-2016 IPR006665 OmpA-like domain R615_RS11770 d76fdc42baa02132bf87a0f4821e8bbf 1924 Pfam PF00691 OmpA family 749 851 1.0E-16 T 22-04-2016 IPR006665 OmpA-like domain R615_RS11770 d76fdc42baa02132bf87a0f4821e8bbf 1924 SUPERFAMILY SSF49401 358 476 1.69E-5 T 22-04-2016 IPR008966 Adhesion domain R615_RS11770 d76fdc42baa02132bf87a0f4821e8bbf 1924 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 362 413 1.3E-8 T 22-04-2016 IPR001434 Domain of unknown function DUF11 R615_RS11770 d76fdc42baa02132bf87a0f4821e8bbf 1924 PANTHER PTHR30128 749 861 1.1E-29 T 22-04-2016 R615_RS16180 f2d3fe6e981b454e48aae4c4f4c4d221 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 3.6E-153 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 R615_RS16180 f2d3fe6e981b454e48aae4c4f4c4d221 344 PANTHER PTHR30486:SF6 1 344 1.6E-196 T 22-04-2016 R615_RS16180 f2d3fe6e981b454e48aae4c4f4c4d221 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 R615_RS16180 f2d3fe6e981b454e48aae4c4f4c4d221 344 PANTHER PTHR30486 1 344 1.6E-196 T 22-04-2016 R615_RS16180 f2d3fe6e981b454e48aae4c4f4c4d221 344 SMART SM00382 122 256 0.0013 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS16180 f2d3fe6e981b454e48aae4c4f4c4d221 344 Gene3D G3DSA:3.40.50.300 100 342 3.6E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16180 f2d3fe6e981b454e48aae4c4f4c4d221 344 SUPERFAMILY SSF52540 5 335 8.93E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16180 f2d3fe6e981b454e48aae4c4f4c4d221 344 Pfam PF00437 Type II/IV secretion system protein 11 260 2.3E-45 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 R615_RS02625 f297747f52caef7e2ff6ddea37f17251 252 PANTHER PTHR24220 7 240 6.7E-69 T 22-04-2016 R615_RS02625 f297747f52caef7e2ff6ddea37f17251 252 SUPERFAMILY SSF52540 5 233 1.33E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02625 f297747f52caef7e2ff6ddea37f17251 252 Gene3D G3DSA:3.40.50.300 7 239 3.0E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02625 f297747f52caef7e2ff6ddea37f17251 252 Pfam PF00005 ABC transporter 22 169 1.8E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS02625 f297747f52caef7e2ff6ddea37f17251 252 SMART SM00382 30 219 3.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS05380 1c17e40a28b462f5639f3d23761469d0 154 Pfam PF07977 FabA-like domain 13 142 2.2E-37 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 R615_RS05380 1c17e40a28b462f5639f3d23761469d0 154 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 5 147 1.2E-57 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 R615_RS05380 1c17e40a28b462f5639f3d23761469d0 154 Gene3D G3DSA:3.10.129.10 4 147 4.8E-54 T 22-04-2016 IPR029069 HotDog domain R615_RS05380 1c17e40a28b462f5639f3d23761469d0 154 SUPERFAMILY SSF54637 3 147 2.79E-48 T 22-04-2016 IPR029069 HotDog domain R615_RS05380 1c17e40a28b462f5639f3d23761469d0 154 PANTHER PTHR30272 5 152 1.3E-69 T 22-04-2016 R615_RS05380 1c17e40a28b462f5639f3d23761469d0 154 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 4 150 33.29 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 3.74E-31 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.74E-31 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 3.74E-31 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 3.74E-31 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.74E-31 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 Gene3D G3DSA:3.40.50.720 1 151 5.0E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00610 158b20abb498aae559b81e7332853e8a 457 Gene3D G3DSA:3.40.50.720 232 375 2.6E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00610 158b20abb498aae559b81e7332853e8a 457 PANTHER PTHR13789:SF225 415 452 2.7E-80 T 22-04-2016 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 PANTHER PTHR13789:SF225 1 169 2.7E-80 T 22-04-2016 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 SUPERFAMILY SSF51735 232 375 4.99E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00610 158b20abb498aae559b81e7332853e8a 457 Gene3D G3DSA:3.30.70.1450 152 224 2.3E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 Gene3D G3DSA:3.30.70.1450 389 436 7.3E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 SUPERFAMILY SSF116726 135 223 9.29E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 PANTHER PTHR13789 415 452 2.7E-80 T 22-04-2016 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 PANTHER PTHR13789 1 169 2.7E-80 T 22-04-2016 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 SUPERFAMILY SSF51735 1 150 1.42E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00610 158b20abb498aae559b81e7332853e8a 457 Pfam PF02254 TrkA-N domain 234 349 1.5E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 Pfam PF02254 TrkA-N domain 3 106 3.8E-27 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 SUPERFAMILY SSF116726 360 437 2.09E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 Pfam PF02080 TrkA-C domain 155 224 2.1E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 R615_RS00610 158b20abb498aae559b81e7332853e8a 457 Pfam PF02080 TrkA-C domain 390 450 1.4E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 R615_RS12080 6e136c5d5a3aee0ae88678a434435fb3 349 PANTHER PTHR11019 173 342 1.8E-19 T 22-04-2016 R615_RS12080 6e136c5d5a3aee0ae88678a434435fb3 349 PANTHER PTHR11019:SF52 173 342 1.8E-19 T 22-04-2016 R615_RS12080 6e136c5d5a3aee0ae88678a434435fb3 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 318 334 5.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS12080 6e136c5d5a3aee0ae88678a434435fb3 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 318 5.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS12080 6e136c5d5a3aee0ae88678a434435fb3 349 SUPERFAMILY SSF46689 287 338 5.02E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS12080 6e136c5d5a3aee0ae88678a434435fb3 349 SMART SM00342 252 334 6.3E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS12080 6e136c5d5a3aee0ae88678a434435fb3 349 Pfam PF12833 Helix-turn-helix domain 259 336 1.8E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS12080 6e136c5d5a3aee0ae88678a434435fb3 349 Gene3D G3DSA:1.10.10.60 286 337 2.0E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS12080 6e136c5d5a3aee0ae88678a434435fb3 349 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 25 208 6.1E-36 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS12080 6e136c5d5a3aee0ae88678a434435fb3 349 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 288 330 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 R615_RS06270 2a933734d910b93cbb577e0044ecfc3a 393 SUPERFAMILY SSF53383 4 392 1.65E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS06270 2a933734d910b93cbb577e0044ecfc3a 393 Pfam PF00155 Aminotransferase class I and II 33 388 5.3E-70 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 R615_RS06270 2a933734d910b93cbb577e0044ecfc3a 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 R615_RS06270 2a933734d910b93cbb577e0044ecfc3a 393 Gene3D G3DSA:3.40.640.10 46 275 6.2E-70 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS06270 2a933734d910b93cbb577e0044ecfc3a 393 PANTHER PTHR11751 15 392 9.6E-163 T 22-04-2016 R615_RS06270 2a933734d910b93cbb577e0044ecfc3a 393 PANTHER PTHR11751:SF306 15 392 9.6E-163 T 22-04-2016 R615_RS06270 2a933734d910b93cbb577e0044ecfc3a 393 Gene3D G3DSA:3.90.1150.10 276 392 1.9E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS11025 175d23cc8d8a14fe1c850cb33bb417b8 431 Pfam PF00108 Thiolase, N-terminal domain 8 276 2.0E-48 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 R615_RS11025 175d23cc8d8a14fe1c850cb33bb417b8 431 PANTHER PTHR18919 3 431 7.6E-170 T 22-04-2016 R615_RS11025 175d23cc8d8a14fe1c850cb33bb417b8 431 SUPERFAMILY SSF53901 307 431 5.55E-29 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS11025 175d23cc8d8a14fe1c850cb33bb417b8 431 Gene3D G3DSA:3.40.47.10 214 288 1.9E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS11025 175d23cc8d8a14fe1c850cb33bb417b8 431 Gene3D G3DSA:3.40.47.10 8 127 1.9E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS11025 175d23cc8d8a14fe1c850cb33bb417b8 431 Gene3D G3DSA:3.40.47.10 299 430 2.6E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS11025 175d23cc8d8a14fe1c850cb33bb417b8 431 Gene3D G3DSA:3.40.47.10 169 213 2.6E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS11025 175d23cc8d8a14fe1c850cb33bb417b8 431 PIRSF PIRSF000429 2 431 1.5E-104 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 R615_RS11025 175d23cc8d8a14fe1c850cb33bb417b8 431 PANTHER PTHR18919:SF5 3 431 7.6E-170 T 22-04-2016 R615_RS11025 175d23cc8d8a14fe1c850cb33bb417b8 431 SUPERFAMILY SSF53901 8 283 5.3E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS11025 175d23cc8d8a14fe1c850cb33bb417b8 431 Pfam PF02803 Thiolase, C-terminal domain 305 431 6.2E-31 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 R615_RS11025 175d23cc8d8a14fe1c850cb33bb417b8 431 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 430 2.3E-113 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 R615_RS15740 09ae43e8ff5ef5929f21aeaf3500e512 425 PIRSF PIRSF006066 1 425 1.0E-101 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 R615_RS15740 09ae43e8ff5ef5929f21aeaf3500e512 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 424 1.2E-105 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 R615_RS15740 09ae43e8ff5ef5929f21aeaf3500e512 425 PANTHER PTHR33362:SF6 8 424 1.1E-83 T 22-04-2016 R615_RS15740 09ae43e8ff5ef5929f21aeaf3500e512 425 PANTHER PTHR33362 8 424 1.1E-83 T 22-04-2016 R615_RS15740 09ae43e8ff5ef5929f21aeaf3500e512 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 420 5.8E-80 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 PANTHER PTHR32282 205 757 3.4E-206 T 22-04-2016 R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 Pfam PF00905 Penicillin binding protein transpeptidase domain 485 722 4.2E-19 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 85 777 8.7E-242 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 SUPERFAMILY SSF53955 210 409 3.37E-65 T 22-04-2016 IPR023346 Lysozyme-like domain R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 SUPERFAMILY SSF56601 371 393 2.53E-109 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 SUPERFAMILY SSF56601 422 785 2.53E-109 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 PANTHER PTHR32282:SF11 205 757 3.4E-206 T 22-04-2016 R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 Gene3D G3DSA:1.10.3810.10 218 390 1.2E-65 T 22-04-2016 R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 Gene3D G3DSA:3.40.710.10 391 773 5.4E-100 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 Gene3D G3DSA:3.30.2060.10 122 209 9.9E-18 T 22-04-2016 R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 Pfam PF14814 Bifunctional transglycosylase second domain 124 206 1.0E-21 T 22-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 Pfam PF00912 Transglycosylase 218 389 5.0E-59 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 R615_RS01385 5429ab318e1257bfc814c2eff266afd0 821 PIRSF PIRSF002799 32 821 1.8E-274 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS00150 6f2836127f92981d645802fefd0d7c6a 204 PANTHER PTHR11839:SF5 3 201 2.3E-78 T 22-04-2016 R615_RS00150 6f2836127f92981d645802fefd0d7c6a 204 PANTHER PTHR11839 3 201 2.3E-78 T 22-04-2016 R615_RS00150 6f2836127f92981d645802fefd0d7c6a 204 Pfam PF00293 NUDIX domain 53 161 2.1E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 R615_RS00150 6f2836127f92981d645802fefd0d7c6a 204 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 16 195 1.7E-53 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 R615_RS00150 6f2836127f92981d645802fefd0d7c6a 204 ProSitePatterns PS00893 Nudix box signature. 94 115 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 R615_RS00150 6f2836127f92981d645802fefd0d7c6a 204 Gene3D G3DSA:3.90.79.10 17 198 2.3E-49 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS00150 6f2836127f92981d645802fefd0d7c6a 204 SUPERFAMILY SSF55811 20 198 1.76E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS04370 edee65976d4e234b6e9d6fb4c77ddd67 268 PANTHER PTHR10037 22 244 8.7E-32 T 22-04-2016 R615_RS04370 edee65976d4e234b6e9d6fb4c77ddd67 268 PRINTS PR00169 Potassium channel signature 78 98 2.3E-5 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 R615_RS04370 edee65976d4e234b6e9d6fb4c77ddd67 268 PRINTS PR00169 Potassium channel signature 140 163 2.3E-5 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 R615_RS04370 edee65976d4e234b6e9d6fb4c77ddd67 268 PRINTS PR00169 Potassium channel signature 52 75 2.3E-5 T 22-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 R615_RS04370 edee65976d4e234b6e9d6fb4c77ddd67 268 Gene3D G3DSA:1.20.120.350 16 118 3.7E-16 T 22-04-2016 IPR027359 Voltage-dependent channel, four helix bundle domain R615_RS04370 edee65976d4e234b6e9d6fb4c77ddd67 268 SUPERFAMILY SSF81324 19 232 1.96E-32 T 22-04-2016 R615_RS04370 edee65976d4e234b6e9d6fb4c77ddd67 268 PANTHER PTHR10037:SF62 22 244 8.7E-32 T 22-04-2016 R615_RS04370 edee65976d4e234b6e9d6fb4c77ddd67 268 Pfam PF00520 Ion transport protein 18 235 1.6E-43 T 22-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 R615_RS05550 6f0bc810e33ad968f012a6ba4cc3b877 301 SUPERFAMILY SSF74650 12 298 3.64E-60 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 R615_RS05550 6f0bc810e33ad968f012a6ba4cc3b877 301 Gene3D G3DSA:2.70.98.10 11 299 7.0E-74 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 R615_RS05550 6f0bc810e33ad968f012a6ba4cc3b877 301 PANTHER PTHR11122:SF14 23 299 1.1E-61 T 22-04-2016 R615_RS05550 6f0bc810e33ad968f012a6ba4cc3b877 301 Pfam PF01263 Aldose 1-epimerase 25 298 9.9E-42 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 R615_RS05550 6f0bc810e33ad968f012a6ba4cc3b877 301 PANTHER PTHR11122 23 299 1.1E-61 T 22-04-2016 R615_RS05550 6f0bc810e33ad968f012a6ba4cc3b877 301 PIRSF PIRSF016020 2 301 2.3E-53 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 R615_RS07500 60cd0f73f7cfa5805313b7584df6cd96 218 Gene3D G3DSA:1.10.287.110 168 215 2.2E-13 T 22-04-2016 IPR001623 DnaJ domain R615_RS07500 60cd0f73f7cfa5805313b7584df6cd96 218 SMART SM00271 165 217 1.5E-6 T 22-04-2016 IPR001623 DnaJ domain R615_RS07500 60cd0f73f7cfa5805313b7584df6cd96 218 Pfam PF00226 DnaJ domain 170 215 2.8E-10 T 22-04-2016 IPR001623 DnaJ domain R615_RS07500 60cd0f73f7cfa5805313b7584df6cd96 218 Pfam PF12339 DNA-J related protein 27 156 8.5E-38 T 22-04-2016 IPR021059 DnaJ-related protein, N-terminal R615_RS07500 60cd0f73f7cfa5805313b7584df6cd96 218 SUPERFAMILY SSF46565 170 214 6.02E-13 T 22-04-2016 IPR001623 DnaJ domain R615_RS17205 5a98ddffd5b206f34fae7664a0ac483b 382 Pfam PF05159 Capsule polysaccharide biosynthesis protein 177 323 4.1E-21 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 R615_RS11305 53908f12ccfce863eb93c7948462ff8a 306 Gene3D G3DSA:3.40.50.300 3 66 7.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17265 3c7321916c6b0b56327aaedfd3004a41 159 Pfam PF12019 Type II transport protein GspH 50 147 2.7E-7 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 R615_RS17265 3c7321916c6b0b56327aaedfd3004a41 159 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17265 3c7321916c6b0b56327aaedfd3004a41 159 SUPERFAMILY SSF54523 11 94 1.18E-15 T 22-04-2016 R615_RS17265 3c7321916c6b0b56327aaedfd3004a41 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 1.2E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17265 3c7321916c6b0b56327aaedfd3004a41 159 Gene3D G3DSA:3.30.700.10 11 51 3.9E-8 T 22-04-2016 R615_RS17265 3c7321916c6b0b56327aaedfd3004a41 159 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 6 30 1.8E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17305 e77421d15a7e4377966a847aa0e418b5 286 PANTHER PTHR35272:SF3 235 283 1.7E-47 T 22-04-2016 R615_RS17305 e77421d15a7e4377966a847aa0e418b5 286 PANTHER PTHR35272:SF3 1 213 1.7E-47 T 22-04-2016 R615_RS17305 e77421d15a7e4377966a847aa0e418b5 286 Gene3D G3DSA:3.40.30.10 116 196 8.4E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS17305 e77421d15a7e4377966a847aa0e418b5 286 Gene3D G3DSA:3.40.30.10 232 284 8.4E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS17305 e77421d15a7e4377966a847aa0e418b5 286 Pfam PF13098 Thioredoxin-like domain 116 283 6.5E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS17305 e77421d15a7e4377966a847aa0e418b5 286 PANTHER PTHR35272 235 283 1.7E-47 T 22-04-2016 R615_RS17305 e77421d15a7e4377966a847aa0e418b5 286 PANTHER PTHR35272 1 213 1.7E-47 T 22-04-2016 R615_RS17305 e77421d15a7e4377966a847aa0e418b5 286 SUPERFAMILY SSF52833 234 283 6.46E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS17305 e77421d15a7e4377966a847aa0e418b5 286 SUPERFAMILY SSF52833 105 197 6.46E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS15150 74c9414d993c9c2b998458a9bf10099a 114 PRINTS PR00189 Transthyretin signature 5 25 2.6E-11 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase R615_RS15150 74c9414d993c9c2b998458a9bf10099a 114 PRINTS PR00189 Transthyretin signature 37 62 2.6E-11 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase R615_RS15150 74c9414d993c9c2b998458a9bf10099a 114 PRINTS PR00189 Transthyretin signature 63 92 2.6E-11 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase R615_RS15150 74c9414d993c9c2b998458a9bf10099a 114 SUPERFAMILY SSF49472 2 114 2.88E-40 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily R615_RS15150 74c9414d993c9c2b998458a9bf10099a 114 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 4 114 2.9E-41 T 22-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 R615_RS15150 74c9414d993c9c2b998458a9bf10099a 114 PANTHER PTHR10395 1 114 3.9E-44 T 22-04-2016 R615_RS15150 74c9414d993c9c2b998458a9bf10099a 114 Pfam PF00576 HIUase/Transthyretin family 6 113 1.3E-36 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily R615_RS15150 74c9414d993c9c2b998458a9bf10099a 114 ProSitePatterns PS00768 Transthyretin signature 1. 9 24 - T 22-04-2016 IPR023418 Transthyretin, thyroxine binding site R615_RS15150 74c9414d993c9c2b998458a9bf10099a 114 PANTHER PTHR10395:SF7 1 114 3.9E-44 T 22-04-2016 R615_RS15150 74c9414d993c9c2b998458a9bf10099a 114 Gene3D G3DSA:2.60.40.180 2 114 5.0E-41 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily R615_RS15150 74c9414d993c9c2b998458a9bf10099a 114 SMART SM00095 1 113 0.0018 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily R615_RS12580 3a52c18dc28262f088d652ddcec4b78e 374 Pfam PF16113 Enoyl-CoA hydratase/isomerase 20 359 1.4E-101 T 22-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 R615_RS12580 3a52c18dc28262f088d652ddcec4b78e 374 PANTHER PTHR11941 10 197 3.3E-88 T 22-04-2016 R615_RS12580 3a52c18dc28262f088d652ddcec4b78e 374 PANTHER PTHR11941 266 343 3.3E-88 T 22-04-2016 R615_RS12580 3a52c18dc28262f088d652ddcec4b78e 374 SUPERFAMILY SSF52096 270 346 3.62E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS12580 3a52c18dc28262f088d652ddcec4b78e 374 SUPERFAMILY SSF52096 12 197 3.62E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS12580 3a52c18dc28262f088d652ddcec4b78e 374 PANTHER PTHR11941:SF53 10 197 3.3E-88 T 22-04-2016 R615_RS12580 3a52c18dc28262f088d652ddcec4b78e 374 PANTHER PTHR11941:SF53 266 343 3.3E-88 T 22-04-2016 R615_RS12580 3a52c18dc28262f088d652ddcec4b78e 374 Gene3D G3DSA:3.90.226.10 275 344 9.3E-47 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS12580 3a52c18dc28262f088d652ddcec4b78e 374 Gene3D G3DSA:3.90.226.10 16 207 9.3E-47 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS02940 aa5ca19f1086776af5811d63648bea1d 359 SUPERFAMILY SSF100879 253 348 5.69E-16 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02940 aa5ca19f1086776af5811d63648bea1d 359 SUPERFAMILY SSF56672 16 245 2.31E-85 T 22-04-2016 R615_RS02940 aa5ca19f1086776af5811d63648bea1d 359 Pfam PF00817 impB/mucB/samB family 23 166 1.7E-50 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02940 aa5ca19f1086776af5811d63648bea1d 359 Gene3D G3DSA:3.30.70.270 82 176 1.5E-31 T 22-04-2016 R615_RS02940 aa5ca19f1086776af5811d63648bea1d 359 PANTHER PTHR11076:SF32 17 345 1.2E-133 T 22-04-2016 R615_RS02940 aa5ca19f1086776af5811d63648bea1d 359 Gene3D G3DSA:1.10.150.20 178 246 3.1E-22 T 22-04-2016 R615_RS02940 aa5ca19f1086776af5811d63648bea1d 359 Pfam PF11798 IMS family HHH motif 178 209 2.4E-6 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02940 aa5ca19f1086776af5811d63648bea1d 359 PANTHER PTHR11076 17 345 1.2E-133 T 22-04-2016 R615_RS02940 aa5ca19f1086776af5811d63648bea1d 359 Hamap MF_01113 DNA polymerase IV [dinB]. 17 358 34.296 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02940 aa5ca19f1086776af5811d63648bea1d 359 Gene3D G3DSA:3.30.1490.100 249 359 2.4E-27 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS04980 83e802ffa12f28007f5a4eb67a109e6c 443 Gene3D G3DSA:3.40.50.300 129 404 9.8E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04980 83e802ffa12f28007f5a4eb67a109e6c 443 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 356 1.4E-73 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS04980 83e802ffa12f28007f5a4eb67a109e6c 443 SUPERFAMILY SSF52540 92 362 3.19E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04980 83e802ffa12f28007f5a4eb67a109e6c 443 PANTHER PTHR15184 1 436 6.7E-231 T 22-04-2016 R615_RS04980 83e802ffa12f28007f5a4eb67a109e6c 443 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 19 436 1.6E-178 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS04980 83e802ffa12f28007f5a4eb67a109e6c 443 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 22 435 4.3E-197 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS04980 83e802ffa12f28007f5a4eb67a109e6c 443 SMART SM00382 157 340 7.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS04980 83e802ffa12f28007f5a4eb67a109e6c 443 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 347 356 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS04980 83e802ffa12f28007f5a4eb67a109e6c 443 PANTHER PTHR15184:SF9 1 436 6.7E-231 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS04980 83e802ffa12f28007f5a4eb67a109e6c 443 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 40 85 1.7E-4 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS00985 cf88219f388aaf8717d30bb8c11a6500 480 PANTHER PTHR11699 11 480 9.1E-181 T 22-04-2016 R615_RS00985 cf88219f388aaf8717d30bb8c11a6500 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 224 231 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 R615_RS00985 cf88219f388aaf8717d30bb8c11a6500 480 PANTHER PTHR11699:SF15 11 480 9.1E-181 T 22-04-2016 R615_RS00985 cf88219f388aaf8717d30bb8c11a6500 480 SUPERFAMILY SSF53720 14 476 1.7E-116 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 R615_RS00985 cf88219f388aaf8717d30bb8c11a6500 480 Pfam PF00171 Aldehyde dehydrogenase family 26 448 1.0E-88 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 R615_RS00985 cf88219f388aaf8717d30bb8c11a6500 480 Gene3D G3DSA:3.40.309.10 240 430 4.3E-54 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 R615_RS00985 cf88219f388aaf8717d30bb8c11a6500 480 Gene3D G3DSA:3.40.605.10 19 239 2.9E-53 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 R615_RS00985 cf88219f388aaf8717d30bb8c11a6500 480 PIRSF PIRSF036492 4 480 7.9E-164 T 22-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 R615_RS04380 72740ed5b19ac57c7f24bed47f283963 579 PANTHER PTHR10010:SF26 5 462 7.9E-87 T 22-04-2016 R615_RS04380 72740ed5b19ac57c7f24bed47f283963 579 Pfam PF02690 Na+/Pi-cotransporter 17 156 1.1E-45 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 R615_RS04380 72740ed5b19ac57c7f24bed47f283963 579 Pfam PF02690 Na+/Pi-cotransporter 187 268 7.1E-13 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 R615_RS04380 72740ed5b19ac57c7f24bed47f283963 579 Gene3D G3DSA:1.20.58.220 465 563 4.3E-7 T 22-04-2016 R615_RS04380 72740ed5b19ac57c7f24bed47f283963 579 Gene3D G3DSA:1.20.58.220 356 464 6.9E-9 T 22-04-2016 R615_RS04380 72740ed5b19ac57c7f24bed47f283963 579 PANTHER PTHR10010 5 462 7.9E-87 T 22-04-2016 R615_RS04380 72740ed5b19ac57c7f24bed47f283963 579 SUPERFAMILY SSF109755 354 563 1.78E-28 T 22-04-2016 R615_RS04380 72740ed5b19ac57c7f24bed47f283963 579 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 9 337 1.1E-66 T 22-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 R615_RS04380 72740ed5b19ac57c7f24bed47f283963 579 Pfam PF01895 PhoU domain 370 458 1.7E-6 T 22-04-2016 IPR026022 PhoU domain R615_RS04380 72740ed5b19ac57c7f24bed47f283963 579 Pfam PF01895 PhoU domain 508 563 2.2E-5 T 22-04-2016 IPR026022 PhoU domain R615_RS13595 530b128393535fa7c3632df9201ee985 251 SUPERFAMILY SSF53807 2 241 2.86E-56 T 22-04-2016 R615_RS13595 530b128393535fa7c3632df9201ee985 251 Gene3D G3DSA:3.40.50.1980 115 241 2.0E-33 T 22-04-2016 R615_RS13595 530b128393535fa7c3632df9201ee985 251 Gene3D G3DSA:3.40.50.1980 2 112 2.4E-26 T 22-04-2016 R615_RS13595 530b128393535fa7c3632df9201ee985 251 PANTHER PTHR30535 1 241 9.8E-51 T 22-04-2016 R615_RS13595 530b128393535fa7c3632df9201ee985 251 Pfam PF01497 Periplasmic binding protein 4 221 9.8E-25 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 R615_RS08575 fb30163784a06109f788f7b4baca88b1 295 PANTHER PTHR11918 1 206 5.2E-64 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein R615_RS08575 fb30163784a06109f788f7b4baca88b1 295 PANTHER PTHR11918:SF47 1 206 5.2E-64 T 22-04-2016 R615_RS08575 fb30163784a06109f788f7b4baca88b1 295 Gene3D G3DSA:3.20.20.70 16 201 2.0E-25 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS08575 fb30163784a06109f788f7b4baca88b1 295 Pfam PF04055 Radical SAM superfamily 22 176 1.5E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 R615_RS08575 fb30163784a06109f788f7b4baca88b1 295 SUPERFAMILY SSF102114 4 243 5.23E-32 T 22-04-2016 R615_RS08575 fb30163784a06109f788f7b4baca88b1 295 SMART SM00729 17 243 4.7E-23 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 SMART SM00091 6 74 4.9E-6 T 22-04-2016 IPR000014 PAS domain R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 SMART SM00388 134 199 3.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 338 2.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 356 2.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 305 2.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 SMART SM00387 238 359 3.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 SUPERFAMILY SSF55874 200 357 1.31E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 PANTHER PTHR24423:SF488 291 358 1.2E-113 T 22-04-2016 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 PANTHER PTHR24423:SF488 4 275 1.2E-113 T 22-04-2016 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 239 358 1.4E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 Pfam PF00989 PAS fold 9 106 1.4E-10 T 22-04-2016 IPR013767 PAS fold GO:0006355 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 PANTHER PTHR24423 291 358 1.2E-113 T 22-04-2016 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 PANTHER PTHR24423 4 275 1.2E-113 T 22-04-2016 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 Gene3D G3DSA:1.10.287.130 128 191 4.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 Gene3D G3DSA:3.30.450.20 9 112 1.6E-20 T 22-04-2016 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 191 6.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 Gene3D G3DSA:3.30.565.10 198 358 5.4E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 SUPERFAMILY SSF55785 9 103 1.92E-10 T 22-04-2016 IPR000014 PAS domain R615_RS02835 73c85c082a454cfe3fa06c2601e687b9 360 SUPERFAMILY SSF47384 125 193 6.08E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS05685 c56778d61b21c4338974e0d94b9fb4ec 540 PANTHER PTHR10668 24 520 1.3E-153 T 22-04-2016 R615_RS05685 c56778d61b21c4338974e0d94b9fb4ec 540 Pfam PF13450 NAD(P)-binding Rossmann-like domain 27 94 2.0E-13 T 22-04-2016 R615_RS05685 c56778d61b21c4338974e0d94b9fb4ec 540 PANTHER PTHR10668:SF61 24 520 1.3E-153 T 22-04-2016 R615_RS05685 c56778d61b21c4338974e0d94b9fb4ec 540 SUPERFAMILY SSF51905 492 520 1.3E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05685 c56778d61b21c4338974e0d94b9fb4ec 540 SUPERFAMILY SSF51905 22 342 1.3E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05685 c56778d61b21c4338974e0d94b9fb4ec 540 Gene3D G3DSA:3.50.50.60 220 326 3.0E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05685 c56778d61b21c4338974e0d94b9fb4ec 540 Gene3D G3DSA:3.50.50.60 22 94 3.0E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS04035 95cdadec34e837cd1ea7a6196a76d47d 241 Gene3D G3DSA:3.40.50.1000 108 236 5.4E-32 T 22-04-2016 IPR023214 HAD-like domain R615_RS04035 95cdadec34e837cd1ea7a6196a76d47d 241 Gene3D G3DSA:3.40.50.1000 22 39 5.4E-32 T 22-04-2016 IPR023214 HAD-like domain R615_RS04035 95cdadec34e837cd1ea7a6196a76d47d 241 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 128 203 1.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS04035 95cdadec34e837cd1ea7a6196a76d47d 241 PANTHER PTHR18901:SF14 24 237 8.4E-50 T 22-04-2016 R615_RS04035 95cdadec34e837cd1ea7a6196a76d47d 241 SUPERFAMILY SSF56784 22 236 8.27E-47 T 22-04-2016 IPR023214 HAD-like domain R615_RS04035 95cdadec34e837cd1ea7a6196a76d47d 241 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 26 236 6.3E-58 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 R615_RS04035 95cdadec34e837cd1ea7a6196a76d47d 241 Gene3D G3DSA:1.10.150.240 40 106 1.9E-19 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 R615_RS04035 95cdadec34e837cd1ea7a6196a76d47d 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 26 210 2.2E-24 T 22-04-2016 IPR023214 HAD-like domain R615_RS04035 95cdadec34e837cd1ea7a6196a76d47d 241 PANTHER PTHR18901 24 237 8.4E-50 T 22-04-2016 R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 Gene3D G3DSA:3.40.50.200 80 433 2.7E-84 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 PRINTS PR00723 Subtilisin serine protease family (S8) signature 373 389 1.3E-13 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 PRINTS PR00723 Subtilisin serine protease family (S8) signature 134 153 1.3E-13 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 PRINTS PR00723 Subtilisin serine protease family (S8) signature 196 209 1.3E-13 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 PANTHER PTHR10795 77 178 4.2E-69 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 PANTHER PTHR10795 535 546 4.2E-69 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 PANTHER PTHR10795 199 449 4.2E-69 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 SUPERFAMILY SSF49785 442 556 3.06E-5 T 22-04-2016 IPR008979 Galactose-binding domain-like R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 PANTHER PTHR10795:SF419 77 178 4.2E-69 T 22-04-2016 R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 PANTHER PTHR10795:SF419 535 546 4.2E-69 T 22-04-2016 R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 PANTHER PTHR10795:SF419 199 449 4.2E-69 T 22-04-2016 R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 SUPERFAMILY SSF52743 121 436 1.31E-74 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 374 384 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 Pfam PF00082 Subtilase family 134 412 3.4E-51 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 R615_RS17290 66542cae67a3756ac66bccb957f1cd31 562 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 200 210 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site R615_RS05210 75da616a2b706dbdef6328836c96b621 506 PANTHER PTHR24423 11 26 3.0E-59 T 22-04-2016 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 PANTHER PTHR24423 222 504 3.0E-59 T 22-04-2016 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 SUPERFAMILY SSF55874 337 503 1.83E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05210 75da616a2b706dbdef6328836c96b621 506 SMART SM00387 393 504 3.4E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05210 75da616a2b706dbdef6328836c96b621 506 PANTHER PTHR24423:SF564 11 26 3.0E-59 T 22-04-2016 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 PANTHER PTHR24423:SF564 222 504 3.0E-59 T 22-04-2016 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 442 1.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 456 1.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 501 1.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 1.2E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 SUPERFAMILY SSF158472 234 280 6.93E-7 T 22-04-2016 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 Pfam PF00672 HAMP domain 210 278 1.3E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 502 2.4E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05210 75da616a2b706dbdef6328836c96b621 506 SMART SM00304 229 281 1.5E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 Gene3D G3DSA:3.30.565.10 335 503 6.6E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05210 75da616a2b706dbdef6328836c96b621 506 SUPERFAMILY SSF47384 265 348 2.94E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 SMART SM00388 282 348 2.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 Gene3D G3DSA:1.10.287.130 272 334 1.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS05210 75da616a2b706dbdef6328836c96b621 506 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 348 5.2E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS14815 d56fa719ba425b0421b881aa631cab09 204 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 194 6.4E-83 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 R615_RS14815 d56fa719ba425b0421b881aa631cab09 204 SUPERFAMILY SSF142695 3 172 3.14E-66 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 R615_RS14815 d56fa719ba425b0421b881aa631cab09 204 PANTHER PTHR21327 3 200 1.0E-127 T 22-04-2016 R615_RS14815 d56fa719ba425b0421b881aa631cab09 204 Pfam PF00925 GTP cyclohydrolase II 6 169 1.4E-69 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 R615_RS14815 d56fa719ba425b0421b881aa631cab09 204 PANTHER PTHR21327:SF14 3 200 1.0E-127 T 22-04-2016 R615_RS14815 d56fa719ba425b0421b881aa631cab09 204 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 46.419 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 R615_RS08895 4a728a686d3975eaa28eabec471990ea 95 SUPERFAMILY SSF55008 17 91 5.11E-19 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 R615_RS08895 4a728a686d3975eaa28eabec471990ea 95 Pfam PF00403 Heavy-metal-associated domain 25 85 1.7E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 R615_RS08895 4a728a686d3975eaa28eabec471990ea 95 Gene3D G3DSA:3.30.70.100 20 91 4.6E-19 T 22-04-2016 R615_RS08895 4a728a686d3975eaa28eabec471990ea 95 PRINTS PR00946 Mercury scavenger protein signature 76 90 5.1E-29 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 R615_RS08895 4a728a686d3975eaa28eabec471990ea 95 PRINTS PR00946 Mercury scavenger protein signature 31 47 5.1E-29 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 R615_RS08895 4a728a686d3975eaa28eabec471990ea 95 PRINTS PR00946 Mercury scavenger protein signature 2 20 5.1E-29 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 R615_RS08895 4a728a686d3975eaa28eabec471990ea 95 PRINTS PR00946 Mercury scavenger protein signature 47 62 5.1E-29 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 R615_RS08895 4a728a686d3975eaa28eabec471990ea 95 PRINTS PR00946 Mercury scavenger protein signature 20 31 5.1E-29 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 R615_RS08895 4a728a686d3975eaa28eabec471990ea 95 PRINTS PR00946 Mercury scavenger protein signature 62 76 5.1E-29 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 R615_RS08895 4a728a686d3975eaa28eabec471990ea 95 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 89 5.1E-36 T 22-04-2016 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 SUPERFAMILY SSF54211 4 184 2.73E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 PANTHER PTHR32463 7 329 7.5E-74 T 22-04-2016 R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 SUPERFAMILY SSF55060 190 336 4.73E-32 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 Pfam PF00288 GHMP kinases N terminal domain 97 164 1.3E-12 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 Gene3D G3DSA:3.30.230.10 5 173 3.8E-29 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 Pfam PF08544 GHMP kinases C terminal 238 317 3.3E-10 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 Gene3D G3DSA:3.30.70.890 190 321 2.5E-18 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 PRINTS PR00960 LmbP protein signature 281 300 1.5E-43 T 22-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 PRINTS PR00960 LmbP protein signature 253 277 1.5E-43 T 22-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 PRINTS PR00960 LmbP protein signature 8 23 1.5E-43 T 22-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 PRINTS PR00960 LmbP protein signature 102 123 1.5E-43 T 22-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 PRINTS PR00960 LmbP protein signature 144 163 1.5E-43 T 22-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 R615_RS06465 e1497cb061d8a7dd33da53c531278c90 356 PIRSF PIRSF036406 2 340 2.9E-123 T 22-04-2016 IPR014606 D,D-heptose 7-phosphate kinase KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 R615_RS06435 6f3f5a24aefcecb6c0f1aea39b44d8b4 183 PIRSF PIRSF000441 6 182 6.6E-42 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 R615_RS06435 6f3f5a24aefcecb6c0f1aea39b44d8b4 183 PANTHER PTHR23416:SF55 21 170 1.1E-19 T 22-04-2016 R615_RS06435 6f3f5a24aefcecb6c0f1aea39b44d8b4 183 PANTHER PTHR23416 21 170 1.1E-19 T 22-04-2016 R615_RS06435 6f3f5a24aefcecb6c0f1aea39b44d8b4 183 SUPERFAMILY SSF51161 60 170 1.08E-26 T 22-04-2016 IPR011004 Trimeric LpxA-like R615_RS06435 6f3f5a24aefcecb6c0f1aea39b44d8b4 183 Gene3D G3DSA:2.160.10.10 69 171 2.2E-22 T 22-04-2016 R615_RS06435 6f3f5a24aefcecb6c0f1aea39b44d8b4 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 153 4.1E-9 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS12220 dca602a953162f5589fec87887c6073e 467 TIGRFAM TIGR00260 thrC: threonine synthase 72 423 7.4E-82 T 22-04-2016 IPR004450 Threonine synthase-like R615_RS12220 dca602a953162f5589fec87887c6073e 467 Pfam PF14821 Threonine synthase N terminus 2 80 1.5E-27 T 22-04-2016 IPR029144 Threonine synthase, N-terminal R615_RS12220 dca602a953162f5589fec87887c6073e 467 Gene3D G3DSA:3.40.50.1100 123 200 1.1E-5 T 22-04-2016 R615_RS12220 dca602a953162f5589fec87887c6073e 467 Gene3D G3DSA:3.40.50.1100 201 437 2.4E-88 T 22-04-2016 R615_RS12220 dca602a953162f5589fec87887c6073e 467 PANTHER PTHR10314:SF1 53 330 1.7E-149 T 22-04-2016 R615_RS12220 dca602a953162f5589fec87887c6073e 467 PANTHER PTHR10314:SF1 363 467 1.7E-149 T 22-04-2016 R615_RS12220 dca602a953162f5589fec87887c6073e 467 PANTHER PTHR10314:SF1 25 36 1.7E-149 T 22-04-2016 R615_RS12220 dca602a953162f5589fec87887c6073e 467 PANTHER PTHR10314 53 330 1.7E-149 T 22-04-2016 R615_RS12220 dca602a953162f5589fec87887c6073e 467 PANTHER PTHR10314 363 467 1.7E-149 T 22-04-2016 R615_RS12220 dca602a953162f5589fec87887c6073e 467 PANTHER PTHR10314 25 36 1.7E-149 T 22-04-2016 R615_RS12220 dca602a953162f5589fec87887c6073e 467 Gene3D G3DSA:3.90.1380.10 1 84 5.1E-29 T 22-04-2016 IPR029144 Threonine synthase, N-terminal R615_RS12220 dca602a953162f5589fec87887c6073e 467 SUPERFAMILY SSF53686 1 461 4.47E-154 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme R615_RS12220 dca602a953162f5589fec87887c6073e 467 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 401 7.7E-19 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme R615_RS12220 dca602a953162f5589fec87887c6073e 467 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 R615_RS09610 8672fd19e52c0adb74ced995e90ea10d 164 Pfam PF02674 Colicin V production protein 4 144 4.2E-40 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 R615_RS09610 8672fd19e52c0adb74ced995e90ea10d 164 PANTHER PTHR36926:SF1 1 160 1.3E-54 T 22-04-2016 R615_RS09610 8672fd19e52c0adb74ced995e90ea10d 164 PANTHER PTHR36926 1 160 1.3E-54 T 22-04-2016 R615_RS13365 184c27b9714fdd53b1bf9b4f63b62c24 244 Gene3D G3DSA:3.40.30.10 3 87 2.9E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS13365 184c27b9714fdd53b1bf9b4f63b62c24 244 PANTHER PTHR11260:SF285 146 208 5.7E-24 T 22-04-2016 R615_RS13365 184c27b9714fdd53b1bf9b4f63b62c24 244 PANTHER PTHR11260:SF285 1 126 5.7E-24 T 22-04-2016 R615_RS13365 184c27b9714fdd53b1bf9b4f63b62c24 244 Gene3D G3DSA:1.20.1050.10 148 228 1.4E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS13365 184c27b9714fdd53b1bf9b4f63b62c24 244 Gene3D G3DSA:1.20.1050.10 88 112 1.4E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS13365 184c27b9714fdd53b1bf9b4f63b62c24 244 Pfam PF00043 Glutathione S-transferase, C-terminal domain 130 205 2.5E-5 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal R615_RS13365 184c27b9714fdd53b1bf9b4f63b62c24 244 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 78 3.3E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 R615_RS13365 184c27b9714fdd53b1bf9b4f63b62c24 244 SUPERFAMILY SSF47616 70 120 2.56E-10 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS13365 184c27b9714fdd53b1bf9b4f63b62c24 244 SUPERFAMILY SSF47616 149 228 2.56E-10 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS13365 184c27b9714fdd53b1bf9b4f63b62c24 244 PANTHER PTHR11260 146 208 5.7E-24 T 22-04-2016 R615_RS13365 184c27b9714fdd53b1bf9b4f63b62c24 244 PANTHER PTHR11260 1 126 5.7E-24 T 22-04-2016 R615_RS13365 184c27b9714fdd53b1bf9b4f63b62c24 244 SUPERFAMILY SSF52833 1 100 3.7E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS01590 1a895655d0699e2c40585f5dcef79e1d 196 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 157 169 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 R615_RS01590 1a895655d0699e2c40585f5dcef79e1d 196 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 175 4.3E-62 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 R615_RS01590 1a895655d0699e2c40585f5dcef79e1d 196 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 196 41.873 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 R615_RS01590 1a895655d0699e2c40585f5dcef79e1d 196 PANTHER PTHR23133:SF2 1 196 7.7E-104 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 R615_RS01590 1a895655d0699e2c40585f5dcef79e1d 196 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 R615_RS01590 1a895655d0699e2c40585f5dcef79e1d 196 Gene3D G3DSA:3.30.230.40 3 89 1.4E-37 T 22-04-2016 R615_RS01590 1a895655d0699e2c40585f5dcef79e1d 196 Gene3D G3DSA:3.30.230.40 91 196 4.4E-30 T 22-04-2016 R615_RS01590 1a895655d0699e2c40585f5dcef79e1d 196 SUPERFAMILY SSF54211 89 179 5.18E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS01590 1a895655d0699e2c40585f5dcef79e1d 196 SUPERFAMILY SSF54211 3 87 1.02E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS01590 1a895655d0699e2c40585f5dcef79e1d 196 PANTHER PTHR23133 1 196 7.7E-104 T 22-04-2016 R615_RS04515 7d5efc1e0d669987d01e6e93cd989b16 362 SMART SM00849 47 253 3.0E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS04515 7d5efc1e0d669987d01e6e93cd989b16 362 Pfam PF00753 Metallo-beta-lactamase superfamily 45 253 7.7E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS04515 7d5efc1e0d669987d01e6e93cd989b16 362 SUPERFAMILY SSF56281 11 327 1.01E-48 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS04515 7d5efc1e0d669987d01e6e93cd989b16 362 PANTHER PTHR11935 2 360 5.5E-31 T 22-04-2016 R615_RS04515 7d5efc1e0d669987d01e6e93cd989b16 362 PANTHER PTHR11935:SF95 2 360 5.5E-31 T 22-04-2016 R615_RS04515 7d5efc1e0d669987d01e6e93cd989b16 362 Gene3D G3DSA:3.60.15.10 30 123 3.3E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS04515 7d5efc1e0d669987d01e6e93cd989b16 362 Gene3D G3DSA:3.60.15.10 167 275 3.3E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 196 360 2.2E-46 T 22-04-2016 IPR000160 GGDEF domain R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 SUPERFAMILY SSF55073 205 363 6.36E-49 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 PANTHER PTHR33121 360 617 2.0E-79 T 22-04-2016 R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 SUPERFAMILY SSF55785 60 187 1.03E-22 T 22-04-2016 IPR000014 PAS domain R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 PANTHER PTHR33121:SF13 360 617 2.0E-79 T 22-04-2016 R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 SMART SM00091 75 141 6.3E-5 T 22-04-2016 IPR000014 PAS domain R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 72 196 2.2E-14 T 22-04-2016 IPR000014 PAS domain R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 SMART SM00052 371 616 3.5E-102 T 22-04-2016 IPR001633 EAL domain R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 357 8.6E-52 T 22-04-2016 IPR000160 GGDEF domain R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 Pfam PF00563 EAL domain 377 611 6.6E-67 T 22-04-2016 IPR001633 EAL domain R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 Gene3D G3DSA:3.30.70.270 201 368 5.5E-55 T 22-04-2016 R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 SMART SM00267 189 361 1.2E-61 T 22-04-2016 IPR000160 GGDEF domain R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 Pfam PF08448 PAS fold 81 190 1.4E-20 T 22-04-2016 IPR013656 PAS fold-4 R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 Gene3D G3DSA:3.30.450.20 62 187 5.5E-21 T 22-04-2016 R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 Gene3D G3DSA:3.20.20.450 374 621 2.1E-88 T 22-04-2016 IPR001633 EAL domain R615_RS00125 28eca0c1ea32e95dcc2554bc1a59f615 625 SUPERFAMILY SSF141868 376 622 1.28E-81 T 22-04-2016 IPR001633 EAL domain R615_RS10710 63bfdf049d6d376237e98a915a15a8a0 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.5E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS10710 63bfdf049d6d376237e98a915a15a8a0 307 Pfam PF03466 LysR substrate binding domain 95 292 4.2E-13 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS10710 63bfdf049d6d376237e98a915a15a8a0 307 PANTHER PTHR30293 2 292 1.3E-59 T 22-04-2016 R615_RS10710 63bfdf049d6d376237e98a915a15a8a0 307 Gene3D G3DSA:1.10.10.10 4 85 1.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS10710 63bfdf049d6d376237e98a915a15a8a0 307 SUPERFAMILY SSF53850 95 292 4.52E-21 T 22-04-2016 R615_RS10710 63bfdf049d6d376237e98a915a15a8a0 307 Gene3D G3DSA:3.40.190.10 189 253 3.3E-5 T 22-04-2016 R615_RS10710 63bfdf049d6d376237e98a915a15a8a0 307 SUPERFAMILY SSF46785 2 84 1.92E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS10710 63bfdf049d6d376237e98a915a15a8a0 307 PANTHER PTHR30293:SF2 2 292 1.3E-59 T 22-04-2016 R615_RS00795 fd6d08e603fc9284df5a7f6c0939eb12 54 Gene3D G3DSA:2.20.28.10 1 53 3.7E-27 T 22-04-2016 IPR004039 Rubredoxin-type fold R615_RS00795 fd6d08e603fc9284df5a7f6c0939eb12 54 SUPERFAMILY SSF57802 1 53 4.21E-23 T 22-04-2016 R615_RS00795 fd6d08e603fc9284df5a7f6c0939eb12 54 Pfam PF00301 Rubredoxin 3 49 5.6E-23 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 R615_RS00795 fd6d08e603fc9284df5a7f6c0939eb12 54 PIRSF PIRSF000071 1 54 1.2E-25 T 22-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 R615_RS00795 fd6d08e603fc9284df5a7f6c0939eb12 54 PRINTS PR00163 Rubredoxin signature 33 49 1.8E-8 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 R615_RS00795 fd6d08e603fc9284df5a7f6c0939eb12 54 PRINTS PR00163 Rubredoxin signature 3 19 1.8E-8 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 PRINTS PR00101 Aspartate carbamoyltransferase signature 274 279 7.2E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 PRINTS PR00101 Aspartate carbamoyltransferase signature 298 312 7.2E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 PRINTS PR00101 Aspartate carbamoyltransferase signature 53 75 7.2E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 PRINTS PR00101 Aspartate carbamoyltransferase signature 233 242 7.2E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 PRINTS PR00101 Aspartate carbamoyltransferase signature 148 165 7.2E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 PRINTS PR00101 Aspartate carbamoyltransferase signature 91 100 7.2E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 63 82 1.9E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 279 1.9E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 149 160 1.9E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 282 305 1.9E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 SUPERFAMILY SSF53671 15 319 7.33E-94 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 17 317 4.9E-91 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 Gene3D G3DSA:3.40.50.1370 160 296 8.9E-48 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 168 315 4.6E-24 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 Gene3D G3DSA:3.40.50.1370 17 159 1.9E-47 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 63 70 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 16 319 40.916 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 17 161 1.2E-36 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 PANTHER PTHR11405:SF16 8 315 3.4E-124 T 22-04-2016 R615_RS01190 b51ecebaca63dd39ad4de9eed54c2b6a 332 PANTHER PTHR11405 8 315 3.4E-124 T 22-04-2016 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 159 9.9E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 SUPERFAMILY SSF52540 6 189 1.09E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 Gene3D G3DSA:3.40.50.300 4 169 4.5E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 PANTHER PTHR11649:SF37 663 730 5.7E-255 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 PANTHER PTHR11649:SF37 6 150 5.7E-255 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 PANTHER PTHR11649:SF37 267 616 5.7E-255 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 Pfam PF07670 Nucleoside recognition 518 695 2.5E-34 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 Pfam PF07670 Nucleoside recognition 357 448 6.9E-12 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 692 1.3E-188 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 Pfam PF07664 Ferrous iron transport protein B C terminus 460 512 2.2E-21 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 4.5E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 4.5E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 PANTHER PTHR11649 663 730 5.7E-255 T 22-04-2016 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 PANTHER PTHR11649 6 150 5.7E-255 T 22-04-2016 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 PANTHER PTHR11649 267 616 5.7E-255 T 22-04-2016 R615_RS12145 87a3ad7a9b660b13bb53c37217eb342d 765 Pfam PF02421 Ferrous iron transport protein B 6 160 1.0E-59 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 R615_RS11140 47f7e407c58aa62f3df81130b854a789 382 SUPERFAMILY SSF52151 4 290 5.23E-49 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 R615_RS11140 47f7e407c58aa62f3df81130b854a789 382 Gene3D G3DSA:3.40.1090.10 8 221 1.7E-14 T 22-04-2016 R615_RS11140 47f7e407c58aa62f3df81130b854a789 382 PANTHER PTHR14226 6 161 4.9E-87 T 22-04-2016 R615_RS11140 47f7e407c58aa62f3df81130b854a789 382 PANTHER PTHR14226 179 331 4.9E-87 T 22-04-2016 R615_RS11140 47f7e407c58aa62f3df81130b854a789 382 PANTHER PTHR14226:SF34 6 161 4.9E-87 T 22-04-2016 R615_RS11140 47f7e407c58aa62f3df81130b854a789 382 PANTHER PTHR14226:SF34 179 331 4.9E-87 T 22-04-2016 R615_RS11140 47f7e407c58aa62f3df81130b854a789 382 Pfam PF01734 Patatin-like phospholipase 8 220 2.9E-24 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 R615_RS06935 19222ae823810319b8d4112c6c446508 581 Gene3D G3DSA:2.60.40.1180 508 578 1.8E-9 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta R615_RS06935 19222ae823810319b8d4112c6c446508 581 SMART SM00642 61 492 5.3E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 R615_RS06935 19222ae823810319b8d4112c6c446508 581 Gene3D G3DSA:3.90.400.10 147 214 4.2E-20 T 22-04-2016 R615_RS06935 19222ae823810319b8d4112c6c446508 581 SUPERFAMILY SSF51445 57 368 1.31E-89 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily R615_RS06935 19222ae823810319b8d4112c6c446508 581 SUPERFAMILY SSF51445 409 534 1.31E-89 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily R615_RS06935 19222ae823810319b8d4112c6c446508 581 PANTHER PTHR10357:SF132 93 350 1.8E-124 T 22-04-2016 R615_RS06935 19222ae823810319b8d4112c6c446508 581 PANTHER PTHR10357:SF132 381 559 1.8E-124 T 22-04-2016 R615_RS06935 19222ae823810319b8d4112c6c446508 581 Gene3D G3DSA:3.20.20.80 221 493 3.7E-99 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 R615_RS06935 19222ae823810319b8d4112c6c446508 581 Gene3D G3DSA:3.20.20.80 59 146 3.7E-99 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 R615_RS06935 19222ae823810319b8d4112c6c446508 581 PANTHER PTHR10357 93 350 1.8E-124 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 R615_RS06935 19222ae823810319b8d4112c6c446508 581 PANTHER PTHR10357 381 559 1.8E-124 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 R615_RS06935 19222ae823810319b8d4112c6c446508 581 Pfam PF00128 Alpha amylase, catalytic domain 94 289 9.5E-20 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 R615_RS06935 19222ae823810319b8d4112c6c446508 581 PIRSF PIRSF003059 7 579 2.9E-180 T 22-04-2016 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 R615_RS08035 f2d3333848a568eca6fd547c8a00def3 182 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 2.7E-42 T 22-04-2016 IPR018639 Domain of unknown function DUF2062 R615_RS08035 f2d3333848a568eca6fd547c8a00def3 182 PANTHER PTHR40547:SF1 1 177 1.9E-38 T 22-04-2016 R615_RS08035 f2d3333848a568eca6fd547c8a00def3 182 PANTHER PTHR40547 1 177 1.9E-38 T 22-04-2016 R615_RS06980 ac31bf6a8137fa8b2f02dcfad1558719 322 Gene3D G3DSA:3.30.70.270 158 319 1.9E-41 T 22-04-2016 R615_RS06980 ac31bf6a8137fa8b2f02dcfad1558719 322 Gene3D G3DSA:3.30.450.20 14 131 1.1E-12 T 22-04-2016 R615_RS06980 ac31bf6a8137fa8b2f02dcfad1558719 322 PANTHER PTHR10799:SF750 1 130 4.8E-20 T 22-04-2016 R615_RS06980 ac31bf6a8137fa8b2f02dcfad1558719 322 PANTHER PTHR10799:SF750 189 319 4.8E-20 T 22-04-2016 R615_RS06980 ac31bf6a8137fa8b2f02dcfad1558719 322 SMART SM00267 145 317 4.2E-39 T 22-04-2016 IPR000160 GGDEF domain R615_RS06980 ac31bf6a8137fa8b2f02dcfad1558719 322 SMART SM00091 12 78 3.1E-4 T 22-04-2016 IPR000014 PAS domain R615_RS06980 ac31bf6a8137fa8b2f02dcfad1558719 322 SUPERFAMILY SSF55073 161 318 2.04E-35 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS06980 ac31bf6a8137fa8b2f02dcfad1558719 322 SUPERFAMILY SSF55785 13 98 6.85E-9 T 22-04-2016 IPR000014 PAS domain R615_RS06980 ac31bf6a8137fa8b2f02dcfad1558719 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 156 316 1.1E-38 T 22-04-2016 IPR000160 GGDEF domain R615_RS06980 ac31bf6a8137fa8b2f02dcfad1558719 322 PANTHER PTHR10799 1 130 4.8E-20 T 22-04-2016 R615_RS06980 ac31bf6a8137fa8b2f02dcfad1558719 322 PANTHER PTHR10799 189 319 4.8E-20 T 22-04-2016 R615_RS06980 ac31bf6a8137fa8b2f02dcfad1558719 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 313 1.3E-35 T 22-04-2016 IPR000160 GGDEF domain R615_RS15295 dcdaaf42f9832a815f80dc88b9f3246c 221 Pfam PF11417 Loader and inhibitor of phage G40P 41 108 4.5E-4 T 22-04-2016 IPR024424 Replicative helicase inhibitor G39P R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 2 233 1.9E-55 T 22-04-2016 IPR006380 Sucrose-phosphatase, N-terminal R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 TIGRFAM TIGR02398 gluc_glyc_Psyn: glucosylglycerol-phosphate synthase 257 742 1.5E-232 T 22-04-2016 IPR012764 Glucosylglycerol-phosphate synthase GO:0016758|GO:0051473 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00795 R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 Gene3D G3DSA:3.40.50.1000 2 78 2.2E-28 T 22-04-2016 IPR023214 HAD-like domain R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 Gene3D G3DSA:3.40.50.1000 150 233 2.2E-28 T 22-04-2016 IPR023214 HAD-like domain R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 2 188 1.2E-14 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 Pfam PF00982 Glycosyltransferase family 20 253 738 2.4E-136 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 SUPERFAMILY SSF56784 2 231 3.6E-27 T 22-04-2016 IPR023214 HAD-like domain R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 PANTHER PTHR10788 476 738 7.3E-253 T 22-04-2016 R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 PANTHER PTHR10788 183 460 7.3E-253 T 22-04-2016 R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 Gene3D G3DSA:3.40.50.2000 526 723 6.9E-75 T 22-04-2016 R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 Gene3D G3DSA:3.40.50.2000 252 525 1.6E-67 T 22-04-2016 R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 Gene3D G3DSA:3.90.1070.10 92 149 0.001 T 22-04-2016 R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 SUPERFAMILY SSF53756 252 737 3.3E-136 T 22-04-2016 R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 PANTHER PTHR10788:SF35 476 738 7.3E-253 T 22-04-2016 R615_RS13285 1862ea6b920dc0caf797c6f0ff438401 752 PANTHER PTHR10788:SF35 183 460 7.3E-253 T 22-04-2016 R615_RS10270 53d838b0a044b2094ccc22e41ac15cbb 202 Gene3D G3DSA:3.30.70.20 51 124 2.8E-6 T 22-04-2016 R615_RS10270 53d838b0a044b2094ccc22e41ac15cbb 202 Gene3D G3DSA:3.30.70.20 125 178 3.6E-16 T 22-04-2016 R615_RS10270 53d838b0a044b2094ccc22e41ac15cbb 202 PANTHER PTHR11938 8 189 3.1E-79 T 22-04-2016 R615_RS10270 53d838b0a044b2094ccc22e41ac15cbb 202 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 7 191 3.0E-83 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 R615_RS10270 53d838b0a044b2094ccc22e41ac15cbb 202 Pfam PF04060 Putative Fe-S cluster 48 79 2.0E-13 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 R615_RS10270 53d838b0a044b2094ccc22e41ac15cbb 202 PANTHER PTHR11938:SF64 8 189 3.1E-79 T 22-04-2016 R615_RS10270 53d838b0a044b2094ccc22e41ac15cbb 202 SUPERFAMILY SSF54862 41 179 3.46E-31 T 22-04-2016 R615_RS10270 53d838b0a044b2094ccc22e41ac15cbb 202 Pfam PF14697 4Fe-4S dicluster domain 113 167 9.3E-18 T 22-04-2016 R615_RS10270 53d838b0a044b2094ccc22e41ac15cbb 202 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 8 188 41.967 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 R615_RS10270 53d838b0a044b2094ccc22e41ac15cbb 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 150 161 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site R615_RS10270 53d838b0a044b2094ccc22e41ac15cbb 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 120 131 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site R615_RS10270 53d838b0a044b2094ccc22e41ac15cbb 202 PIRSF PIRSF005784 7 193 8.9E-86 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 R615_RS08775 951f03e70df2f77e154b1b8a457a19ad 228 SMART SM00448 1 112 1.9E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS08775 951f03e70df2f77e154b1b8a457a19ad 228 Pfam PF00072 Response regulator receiver domain 4 112 3.4E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS08775 951f03e70df2f77e154b1b8a457a19ad 228 Gene3D G3DSA:3.40.50.2300 1 120 1.6E-36 T 22-04-2016 R615_RS08775 951f03e70df2f77e154b1b8a457a19ad 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 3.8E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS08775 951f03e70df2f77e154b1b8a457a19ad 228 PANTHER PTHR26402:SF575 1 222 8.3E-105 T 22-04-2016 R615_RS08775 951f03e70df2f77e154b1b8a457a19ad 228 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 3.6E-101 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 R615_RS08775 951f03e70df2f77e154b1b8a457a19ad 228 SUPERFAMILY SSF46894 127 222 5.95E-29 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS08775 951f03e70df2f77e154b1b8a457a19ad 228 SMART SM00862 146 221 8.4E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS08775 951f03e70df2f77e154b1b8a457a19ad 228 Gene3D G3DSA:1.10.10.10 127 222 4.3E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS08775 951f03e70df2f77e154b1b8a457a19ad 228 SUPERFAMILY SSF52172 1 118 1.32E-37 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS08775 951f03e70df2f77e154b1b8a457a19ad 228 PANTHER PTHR26402 1 222 8.3E-105 T 22-04-2016 R615_RS16125 471d0cd697910a6d7c7f780cf94001c8 174 SUPERFAMILY SSF88874 1 168 9.59E-51 T 22-04-2016 R615_RS16125 471d0cd697910a6d7c7f780cf94001c8 174 PANTHER PTHR34720 1 173 7.6E-64 T 22-04-2016 R615_RS16125 471d0cd697910a6d7c7f780cf94001c8 174 Pfam PF07484 Phage Tail Collar Domain 7 63 1.1E-27 T 22-04-2016 IPR011083 Phage tail collar domain R615_RS16125 471d0cd697910a6d7c7f780cf94001c8 174 Gene3D G3DSA:3.90.1340.10 1 68 2.6E-33 T 22-04-2016 IPR011083 Phage tail collar domain R615_RS13370 6182643c901fadf9d89af6940e445f8d 174 Pfam PF13279 Thioesterase-like superfamily 35 136 6.1E-6 T 22-04-2016 R615_RS13370 6182643c901fadf9d89af6940e445f8d 174 Gene3D G3DSA:3.10.129.10 22 135 6.7E-8 T 22-04-2016 IPR029069 HotDog domain R615_RS13370 6182643c901fadf9d89af6940e445f8d 174 SUPERFAMILY SSF54637 23 133 8.96E-13 T 22-04-2016 IPR029069 HotDog domain R615_RS05350 0ec01a05d9fbbf2d2314d8a789840252 281 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 233 259 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 R615_RS05350 0ec01a05d9fbbf2d2314d8a789840252 281 PANTHER PTHR13773:SF0 3 274 1.6E-59 T 22-04-2016 R615_RS05350 0ec01a05d9fbbf2d2314d8a789840252 281 Pfam PF01148 Cytidylyltransferase family 3 272 6.1E-61 T 22-04-2016 R615_RS05350 0ec01a05d9fbbf2d2314d8a789840252 281 PANTHER PTHR13773 3 274 1.6E-59 T 22-04-2016 R615_RS09840 bc2419cd9a3d185846a2fcf684f9769a 551 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 424 516 4.3E-12 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 R615_RS09840 bc2419cd9a3d185846a2fcf684f9769a 551 SUPERFAMILY SSF51905 28 313 3.78E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09840 bc2419cd9a3d185846a2fcf684f9769a 551 Pfam PF01266 FAD dependent oxidoreductase 31 352 8.5E-48 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 R615_RS09840 bc2419cd9a3d185846a2fcf684f9769a 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 343 349 1.1E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 R615_RS09840 bc2419cd9a3d185846a2fcf684f9769a 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 104 116 1.1E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 R615_RS09840 bc2419cd9a3d185846a2fcf684f9769a 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 59 71 1.1E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 R615_RS09840 bc2419cd9a3d185846a2fcf684f9769a 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 372 384 1.1E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 R615_RS09840 bc2419cd9a3d185846a2fcf684f9769a 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 43 53 1.1E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 R615_RS09840 bc2419cd9a3d185846a2fcf684f9769a 551 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 30 42 1.1E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 R615_RS09840 bc2419cd9a3d185846a2fcf684f9769a 551 Gene3D G3DSA:3.50.50.60 29 290 2.6E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09840 bc2419cd9a3d185846a2fcf684f9769a 551 PANTHER PTHR11985:SF1 27 530 1.5E-151 T 22-04-2016 R615_RS09840 bc2419cd9a3d185846a2fcf684f9769a 551 PANTHER PTHR11985 27 530 1.5E-151 T 22-04-2016 R615_RS03900 38a5ee1870307f6077b4175a9dbe942f 206 PANTHER PTHR10920:SF20 1 206 2.2E-114 T 22-04-2016 R615_RS03900 38a5ee1870307f6077b4175a9dbe942f 206 Gene3D G3DSA:3.40.50.150 3 205 8.0E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03900 38a5ee1870307f6077b4175a9dbe942f 206 PIRSF PIRSF005461 1 206 1.0E-77 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 R615_RS03900 38a5ee1870307f6077b4175a9dbe942f 206 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 30.148 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 R615_RS03900 38a5ee1870307f6077b4175a9dbe942f 206 PANTHER PTHR10920 1 206 2.2E-114 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 R615_RS03900 38a5ee1870307f6077b4175a9dbe942f 206 SUPERFAMILY SSF53335 27 205 6.35E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03900 38a5ee1870307f6077b4175a9dbe942f 206 Pfam PF01728 FtsJ-like methyltransferase 28 204 1.3E-58 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 R615_RS16435 2cdab52530c9c7da55ca366b95d6e73a 919 PANTHER PTHR11903:SF11 372 621 4.0E-205 T 22-04-2016 R615_RS16435 2cdab52530c9c7da55ca366b95d6e73a 919 PANTHER PTHR11903:SF11 25 347 4.0E-205 T 22-04-2016 R615_RS16435 2cdab52530c9c7da55ca366b95d6e73a 919 Pfam PF03098 Animal haem peroxidase 61 608 1.5E-121 T 22-04-2016 IPR019791 Haem peroxidase, animal R615_RS16435 2cdab52530c9c7da55ca366b95d6e73a 919 Gene3D G3DSA:1.10.640.10 185 311 1.9E-100 T 22-04-2016 IPR019791 Haem peroxidase, animal R615_RS16435 2cdab52530c9c7da55ca366b95d6e73a 919 Gene3D G3DSA:1.10.640.10 373 606 1.9E-100 T 22-04-2016 IPR019791 Haem peroxidase, animal R615_RS16435 2cdab52530c9c7da55ca366b95d6e73a 919 Gene3D G3DSA:1.10.640.10 29 143 1.9E-100 T 22-04-2016 IPR019791 Haem peroxidase, animal R615_RS16435 2cdab52530c9c7da55ca366b95d6e73a 919 PANTHER PTHR11903 372 621 4.0E-205 T 22-04-2016 R615_RS16435 2cdab52530c9c7da55ca366b95d6e73a 919 PANTHER PTHR11903 25 347 4.0E-205 T 22-04-2016 R615_RS16435 2cdab52530c9c7da55ca366b95d6e73a 919 SUPERFAMILY SSF48113 378 633 9.18E-120 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 R615_RS16435 2cdab52530c9c7da55ca366b95d6e73a 919 SUPERFAMILY SSF48113 58 305 9.18E-120 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 R615_RS13245 f77a2ce5cd35abc81501e98fa71e0e76 297 Pfam PF12833 Helix-turn-helix domain 213 290 7.7E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS13245 f77a2ce5cd35abc81501e98fa71e0e76 297 SUPERFAMILY SSF46689 242 291 5.38E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS13245 f77a2ce5cd35abc81501e98fa71e0e76 297 Gene3D G3DSA:1.10.10.60 242 292 2.6E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS13245 f77a2ce5cd35abc81501e98fa71e0e76 297 SMART SM00342 207 289 4.9E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS13245 f77a2ce5cd35abc81501e98fa71e0e76 297 PANTHER PTHR11019:SF52 192 297 4.8E-22 T 22-04-2016 R615_RS13245 f77a2ce5cd35abc81501e98fa71e0e76 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 243 285 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 R615_RS13245 f77a2ce5cd35abc81501e98fa71e0e76 297 PANTHER PTHR11019 192 297 4.8E-22 T 22-04-2016 R615_RS16520 5d86500809822095ba524ca03e0f99cb 260 Pfam PF01925 Sulfite exporter TauE/SafE 6 256 1.3E-54 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 R615_RS16520 5d86500809822095ba524ca03e0f99cb 260 PANTHER PTHR30269:SF18 1 258 4.5E-80 T 22-04-2016 R615_RS16520 5d86500809822095ba524ca03e0f99cb 260 PANTHER PTHR30269 1 258 4.5E-80 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 289 296 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 368 385 9.3E-19 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 249 262 9.3E-19 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 312 328 9.3E-19 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 285 303 9.3E-19 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 410 425 9.3E-19 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 SMART SM00846 130 291 1.4E-50 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 SUPERFAMILY SSF55347 291 454 7.44E-57 T 22-04-2016 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 132 465 1.9E-112 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 SUPERFAMILY SSF51735 131 307 6.74E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 PANTHER PTHR10836:SF35 118 478 1.4E-219 T 22-04-2016 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 Gene3D G3DSA:3.40.50.720 131 299 3.4E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 PANTHER PTHR10836 118 478 1.4E-219 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 Gene3D G3DSA:3.30.360.10 300 455 7.2E-59 T 22-04-2016 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 296 453 3.8E-50 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS07105 b23c63838b711a5b654b16a03966b1d6 482 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 131 291 1.9E-37 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 R615_RS12795 2d5606ade66aa4d8131b59cff105475f 422 Pfam PF01555 DNA methylase 66 382 3.4E-39 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 R615_RS12795 2d5606ade66aa4d8131b59cff105475f 422 PIRSF PIRSF015855 10 415 9.0E-99 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 R615_RS12795 2d5606ade66aa4d8131b59cff105475f 422 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 69 75 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 R615_RS12795 2d5606ade66aa4d8131b59cff105475f 422 SUPERFAMILY SSF53335 39 229 4.82E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12795 2d5606ade66aa4d8131b59cff105475f 422 SUPERFAMILY SSF53335 298 384 4.82E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12795 2d5606ade66aa4d8131b59cff105475f 422 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 325 347 3.6E-14 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 R615_RS12795 2d5606ade66aa4d8131b59cff105475f 422 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 66 78 3.6E-14 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 R615_RS12795 2d5606ade66aa4d8131b59cff105475f 422 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 108 127 3.6E-14 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 R615_RS12795 2d5606ade66aa4d8131b59cff105475f 422 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 348 362 3.6E-14 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 R615_RS12795 2d5606ade66aa4d8131b59cff105475f 422 Gene3D G3DSA:3.40.50.150 242 407 5.0E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12795 2d5606ade66aa4d8131b59cff105475f 422 Gene3D G3DSA:3.40.50.150 44 203 5.0E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS08640 c9fc6660cdb6c7a82433069ebad33138 356 SUPERFAMILY SSF158544 214 263 4.97E-6 T 22-04-2016 R615_RS08640 c9fc6660cdb6c7a82433069ebad33138 356 Gene3D G3DSA:1.10.40.60 214 266 2.5E-7 T 22-04-2016 R615_RS08640 c9fc6660cdb6c7a82433069ebad33138 356 PIRSF PIRSF002786 15 343 1.2E-60 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 R615_RS08640 c9fc6660cdb6c7a82433069ebad33138 356 Pfam PF03934 Type II secretion system (T2SS), protein K 45 326 5.8E-66 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 R615_RS08640 c9fc6660cdb6c7a82433069ebad33138 356 PANTHER PTHR38831:SF1 19 339 7.3E-21 T 22-04-2016 R615_RS08640 c9fc6660cdb6c7a82433069ebad33138 356 SUPERFAMILY SSF158544 116 211 9.15E-16 T 22-04-2016 R615_RS08640 c9fc6660cdb6c7a82433069ebad33138 356 PANTHER PTHR38831 19 339 7.3E-21 T 22-04-2016 R615_RS08640 c9fc6660cdb6c7a82433069ebad33138 356 Gene3D G3DSA:3.30.1300.30 41 113 1.1E-13 T 22-04-2016 R615_RS08640 c9fc6660cdb6c7a82433069ebad33138 356 Gene3D G3DSA:3.30.1300.30 300 338 1.1E-13 T 22-04-2016 R615_RS08640 c9fc6660cdb6c7a82433069ebad33138 356 SUPERFAMILY SSF54523 52 115 3.77E-14 T 22-04-2016 R615_RS08640 c9fc6660cdb6c7a82433069ebad33138 356 SUPERFAMILY SSF54523 299 327 3.77E-14 T 22-04-2016 R615_RS08640 c9fc6660cdb6c7a82433069ebad33138 356 Gene3D G3DSA:1.10.40.60 114 212 3.9E-18 T 22-04-2016 R615_RS13510 1296c969235446a77f9cd8fb4112c43c 498 Pfam PF00743 Flavin-binding monooxygenase-like 82 347 6.3E-14 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 R615_RS13510 1296c969235446a77f9cd8fb4112c43c 498 SUPERFAMILY SSF51905 150 344 6.91E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS13510 1296c969235446a77f9cd8fb4112c43c 498 SUPERFAMILY SSF51905 4 215 2.35E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS13510 1296c969235446a77f9cd8fb4112c43c 498 Pfam PF13450 NAD(P)-binding Rossmann-like domain 10 57 4.5E-6 T 22-04-2016 R615_RS13510 1296c969235446a77f9cd8fb4112c43c 498 PANTHER PTHR23023 3 467 1.7E-220 T 22-04-2016 R615_RS13510 1296c969235446a77f9cd8fb4112c43c 498 PANTHER PTHR23023:SF30 3 467 1.7E-220 T 22-04-2016 R615_RS13510 1296c969235446a77f9cd8fb4112c43c 498 Gene3D G3DSA:3.50.50.60 324 462 7.3E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS13510 1296c969235446a77f9cd8fb4112c43c 498 Gene3D G3DSA:3.50.50.60 4 220 1.4E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS07305 50397115556d82595b9e7c451da7dfc9 157 Gene3D G3DSA:3.40.50.270 1 134 7.6E-37 T 22-04-2016 R615_RS07305 50397115556d82595b9e7c451da7dfc9 157 PANTHER PTHR11717:SF18 1 146 7.3E-31 T 22-04-2016 R615_RS07305 50397115556d82595b9e7c451da7dfc9 157 SMART SM00226 2 136 2.6E-27 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily R615_RS07305 50397115556d82595b9e7c451da7dfc9 157 PANTHER PTHR11717 1 146 7.3E-31 T 22-04-2016 R615_RS07305 50397115556d82595b9e7c451da7dfc9 157 SUPERFAMILY SSF52788 1 134 2.09E-34 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily R615_RS07305 50397115556d82595b9e7c451da7dfc9 157 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 133 4.6E-20 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 Pfam PF00175 Oxidoreductase NAD-binding domain 161 257 8.1E-17 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 160 179 2.3E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 98 105 2.3E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 79 89 2.3E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 197 208 2.3E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 Pfam PF00970 Oxidoreductase FAD-binding domain 55 150 5.6E-8 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 PANTHER PTHR19370 51 276 1.5E-46 T 22-04-2016 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 SUPERFAMILY SSF54292 268 375 1.7E-16 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 Gene3D G3DSA:2.40.30.10 52 151 2.2E-19 T 22-04-2016 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 SUPERFAMILY SSF63380 51 152 5.57E-19 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 SUPERFAMILY SSF52343 153 279 7.2E-33 T 22-04-2016 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 Gene3D G3DSA:3.40.50.80 152 274 1.2E-32 T 22-04-2016 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 PRINTS PR00410 Phenol hydroxylase reductase family signature 79 91 2.3E-11 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 PRINTS PR00410 Phenol hydroxylase reductase family signature 244 252 2.3E-11 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 194 2.3E-11 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 PRINTS PR00410 Phenol hydroxylase reductase family signature 160 179 2.3E-11 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 Gene3D G3DSA:3.10.20.30 275 374 1.6E-16 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS05435 9cf179f1d5a74319bd2a8a5ed8308902 375 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 303 346 1.1E-4 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 SUPERFAMILY SSF48179 179 331 2.72E-51 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 Gene3D G3DSA:3.40.50.720 4 183 8.8E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 159 4.9E-49 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 5.1E-44 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 5.1E-44 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 5.1E-44 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 5.1E-44 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 5.1E-44 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 5.1E-44 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 Gene3D G3DSA:1.10.1040.10 184 325 5.4E-53 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 SUPERFAMILY SSF51735 4 180 1.03E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 319 5.5E-49 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 PIRSF PIRSF000114 2 332 3.9E-105 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 322 34.484 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 R615_RS08305 99c11d88f960ea5fbda5232d9922807c 341 PANTHER PTHR11728 2 324 6.9E-133 T 22-04-2016 R615_RS17435 30dce1447192a1698581ded28511a72f 122 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17435 30dce1447192a1698581ded28511a72f 122 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 26 2.2E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17435 30dce1447192a1698581ded28511a72f 122 Pfam PF02501 Type II secretion system (T2SS), protein I 42 119 1.3E-20 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 R615_RS17435 30dce1447192a1698581ded28511a72f 122 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 27 3.4E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17435 30dce1447192a1698581ded28511a72f 122 Gene3D G3DSA:3.30.1300.30 36 117 2.8E-18 T 22-04-2016 R615_RS17435 30dce1447192a1698581ded28511a72f 122 TIGRFAM TIGR01707 gspI: type II secretion system protein I 8 103 3.9E-22 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 R615_RS17435 30dce1447192a1698581ded28511a72f 122 SUPERFAMILY SSF54523 41 119 1.18E-16 T 22-04-2016 R615_RS17435 30dce1447192a1698581ded28511a72f 122 PANTHER PTHR38779 2 122 1.2E-22 T 22-04-2016 R615_RS17435 30dce1447192a1698581ded28511a72f 122 PANTHER PTHR38779:SF2 2 122 1.2E-22 T 22-04-2016 R615_RS03170 381570018a4aa397cffbd2c845787e76 608 SUPERFAMILY SSF52833 492 600 1.02E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS03170 381570018a4aa397cffbd2c845787e76 608 Gene3D G3DSA:3.40.30.10 504 600 4.0E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS03170 381570018a4aa397cffbd2c845787e76 608 Pfam PF11412 Disulphide bond corrector protein DsbC 45 155 2.6E-23 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain R615_RS03170 381570018a4aa397cffbd2c845787e76 608 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 10 604 33.236 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 R615_RS03170 381570018a4aa397cffbd2c845787e76 608 Gene3D G3DSA:2.60.40.1250 42 155 9.8E-31 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain R615_RS03170 381570018a4aa397cffbd2c845787e76 608 PANTHER PTHR32234 36 608 2.0E-156 T 22-04-2016 R615_RS03170 381570018a4aa397cffbd2c845787e76 608 PANTHER PTHR32234:SF0 36 608 2.0E-156 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 R615_RS03170 381570018a4aa397cffbd2c845787e76 608 Pfam PF00085 Thioredoxin 498 600 1.5E-11 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 R615_RS03170 381570018a4aa397cffbd2c845787e76 608 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 198 404 8.1E-16 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 R615_RS03170 381570018a4aa397cffbd2c845787e76 608 SUPERFAMILY SSF74863 43 154 7.06E-28 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain R615_RS01040 569aa408d3f3d294a26d7d7821e6933c 110 ProSitePatterns PS00892 HIT domain signature. 85 103 - T 22-04-2016 IPR019808 Histidine triad, conserved site R615_RS01040 569aa408d3f3d294a26d7d7821e6933c 110 PANTHER PTHR23089:SF2 3 107 3.8E-44 T 22-04-2016 R615_RS01040 569aa408d3f3d294a26d7d7821e6933c 110 PRINTS PR00332 Histidine triad family signature 5 21 7.9E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein R615_RS01040 569aa408d3f3d294a26d7d7821e6933c 110 PRINTS PR00332 Histidine triad family signature 26 44 7.9E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein R615_RS01040 569aa408d3f3d294a26d7d7821e6933c 110 PRINTS PR00332 Histidine triad family signature 92 102 7.9E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein R615_RS01040 569aa408d3f3d294a26d7d7821e6933c 110 Gene3D G3DSA:3.30.428.10 2 106 3.9E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 R615_RS01040 569aa408d3f3d294a26d7d7821e6933c 110 PANTHER PTHR23089 3 107 3.8E-44 T 22-04-2016 IPR001310 Histidine triad (HIT) protein R615_RS01040 569aa408d3f3d294a26d7d7821e6933c 110 Pfam PF01230 HIT domain 13 106 1.8E-26 T 22-04-2016 IPR001310 Histidine triad (HIT) protein R615_RS01040 569aa408d3f3d294a26d7d7821e6933c 110 SUPERFAMILY SSF54197 1 107 1.52E-35 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 R615_RS02290 422a9470b918380dd45deed753ec282e 456 SUPERFAMILY SSF103473 8 381 3.27E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS02290 422a9470b918380dd45deed753ec282e 456 Pfam PF07690 Major Facilitator Superfamily 18 350 1.8E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 R615_RS02290 422a9470b918380dd45deed753ec282e 456 PANTHER PTHR23510 1 396 1.4E-123 T 22-04-2016 R615_RS02290 422a9470b918380dd45deed753ec282e 456 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 R615_RS02290 422a9470b918380dd45deed753ec282e 456 Gene3D G3DSA:1.20.1250.20 207 381 3.2E-23 T 22-04-2016 R615_RS02290 422a9470b918380dd45deed753ec282e 456 Gene3D G3DSA:1.20.1250.20 9 193 4.1E-31 T 22-04-2016 R615_RS02290 422a9470b918380dd45deed753ec282e 456 PANTHER PTHR23510:SF6 1 396 1.4E-123 T 22-04-2016 R615_RS07285 87397421b3ea1a337ad98a4b2396bafe 144 Pfam PF13673 Acetyltransferase (GNAT) domain 33 130 1.1E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS07285 87397421b3ea1a337ad98a4b2396bafe 144 PANTHER PTHR23091 1 128 8.8E-16 T 22-04-2016 R615_RS07285 87397421b3ea1a337ad98a4b2396bafe 144 Gene3D G3DSA:3.40.630.30 1 137 5.3E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS07285 87397421b3ea1a337ad98a4b2396bafe 144 SUPERFAMILY SSF55729 1 130 1.1E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS07285 87397421b3ea1a337ad98a4b2396bafe 144 PANTHER PTHR23091:SF264 1 128 8.8E-16 T 22-04-2016 R615_RS04675 7d42e605c5e7af3269e86385083793ca 412 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 410 3.5E-88 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 R615_RS04675 7d42e605c5e7af3269e86385083793ca 412 PANTHER PTHR30244 1 185 6.6E-67 T 22-04-2016 R615_RS04675 7d42e605c5e7af3269e86385083793ca 412 PANTHER PTHR30244 250 412 6.6E-67 T 22-04-2016 R615_RS04675 7d42e605c5e7af3269e86385083793ca 412 PANTHER PTHR30244:SF5 1 185 6.6E-67 T 22-04-2016 R615_RS04675 7d42e605c5e7af3269e86385083793ca 412 PANTHER PTHR30244:SF5 250 412 6.6E-67 T 22-04-2016 R615_RS04675 7d42e605c5e7af3269e86385083793ca 412 SUPERFAMILY SSF64518 1 412 5.23E-74 T 22-04-2016 R615_RS04675 7d42e605c5e7af3269e86385083793ca 412 Gene3D G3DSA:1.20.1330.10 317 361 1.5E-25 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 R615_RS04675 7d42e605c5e7af3269e86385083793ca 412 Gene3D G3DSA:1.20.1330.10 53 168 1.5E-25 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 R615_RS04675 7d42e605c5e7af3269e86385083793ca 412 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 138 4.4E-24 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 R615_RS04675 7d42e605c5e7af3269e86385083793ca 412 Pfam PF00700 Bacterial flagellin C-terminal helical region 334 405 8.0E-7 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 R615_RS10340 0b5f6e859f5b281c3f5c4eea21949177 117 Pfam PF03692 Putative zinc- or iron-chelating domain 19 82 3.6E-10 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein R615_RS10340 0b5f6e859f5b281c3f5c4eea21949177 117 PIRSF PIRSF029611 1 117 1.5E-65 T 22-04-2016 IPR016928 Uncharacterised conserved protein UCP029611 R615_RS07575 08b553ec48c900f734e12f665f183917 478 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 445 6.5E-114 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 R615_RS07575 08b553ec48c900f734e12f665f183917 478 SUPERFAMILY SSF81442 10 471 2.22E-123 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 R615_RS07575 08b553ec48c900f734e12f665f183917 478 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 474 9.4E-225 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 R615_RS07575 08b553ec48c900f734e12f665f183917 478 Gene3D G3DSA:1.20.210.10 11 472 5.9E-70 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 R615_RS07575 08b553ec48c900f734e12f665f183917 478 PANTHER PTHR10422:SF21 9 465 1.7E-282 T 22-04-2016 R615_RS07575 08b553ec48c900f734e12f665f183917 478 PANTHER PTHR10422 9 465 1.7E-282 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 R615_RS07575 08b553ec48c900f734e12f665f183917 478 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 204 259 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.7E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.7E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.7E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.7E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.7E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.7E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 SUPERFAMILY SSF52313 6 227 2.35E-94 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 Gene3D G3DSA:3.40.50.10490 158 239 2.5E-64 T 22-04-2016 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 Gene3D G3DSA:3.40.50.10490 23 99 2.5E-64 T 22-04-2016 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 Gene3D G3DSA:1.10.287.610 100 152 4.2E-25 T 22-04-2016 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 PANTHER PTHR12534 1 245 3.0E-116 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.1E-105 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.455 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 R615_RS05325 2ccc299a069a2de9ac77cf6b964f6c47 248 Pfam PF00318 Ribosomal protein S2 9 224 5.5E-96 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS09000 92728540c072d07855374bf7ebf59970 414 SMART SM00028 369 402 51.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS09000 92728540c072d07855374bf7ebf59970 414 SMART SM00028 190 223 190.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS09000 92728540c072d07855374bf7ebf59970 414 SMART SM00028 69 102 27.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS09000 92728540c072d07855374bf7ebf59970 414 SMART SM00028 151 184 45.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS09000 92728540c072d07855374bf7ebf59970 414 SUPERFAMILY SSF48452 361 412 4.09E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09000 92728540c072d07855374bf7ebf59970 414 SUPERFAMILY SSF48452 219 285 4.09E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09000 92728540c072d07855374bf7ebf59970 414 Gene3D G3DSA:1.25.40.10 169 274 2.0E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09000 92728540c072d07855374bf7ebf59970 414 Gene3D G3DSA:1.25.40.10 72 168 1.2E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09000 92728540c072d07855374bf7ebf59970 414 Gene3D G3DSA:1.25.40.10 275 409 0.001 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09000 92728540c072d07855374bf7ebf59970 414 SUPERFAMILY SSF48452 114 245 2.09E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS10855 501ee741b05ecd05db8dc48342ab563d 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 172 212 9.5E-18 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 R615_RS10855 501ee741b05ecd05db8dc48342ab563d 212 Gene3D G3DSA:2.30.110.10 16 212 1.5E-78 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 R615_RS10855 501ee741b05ecd05db8dc48342ab563d 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 212 36.912 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 R615_RS10855 501ee741b05ecd05db8dc48342ab563d 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 212 1.6E-82 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 R615_RS10855 501ee741b05ecd05db8dc48342ab563d 212 PANTHER PTHR10851:SF0 1 212 3.7E-97 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 R615_RS10855 501ee741b05ecd05db8dc48342ab563d 212 PIRSF PIRSF000190 1 212 1.6E-75 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 R615_RS10855 501ee741b05ecd05db8dc48342ab563d 212 SUPERFAMILY SSF50475 7 212 2.95E-61 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 R615_RS10855 501ee741b05ecd05db8dc48342ab563d 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 119 1.2E-18 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 R615_RS10855 501ee741b05ecd05db8dc48342ab563d 212 PANTHER PTHR10851 1 212 3.7E-97 T 22-04-2016 R615_RS10855 501ee741b05ecd05db8dc48342ab563d 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 182 195 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 R615_RS06585 2de77455a6f10c04557ac3bafb06f294 119 Gene3D G3DSA:1.10.1660.10 19 117 1.7E-16 T 22-04-2016 R615_RS06585 2de77455a6f10c04557ac3bafb06f294 119 PANTHER PTHR30204:SF15 11 117 4.8E-31 T 22-04-2016 R615_RS06585 2de77455a6f10c04557ac3bafb06f294 119 SMART SM00422 19 89 1.5E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS06585 2de77455a6f10c04557ac3bafb06f294 119 Pfam PF13411 MerR HTH family regulatory protein 19 88 1.9E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS06585 2de77455a6f10c04557ac3bafb06f294 119 PANTHER PTHR30204 11 117 4.8E-31 T 22-04-2016 R615_RS06585 2de77455a6f10c04557ac3bafb06f294 119 SUPERFAMILY SSF46955 17 117 1.69E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 SUPERFAMILY SSF48168 10 221 2.35E-71 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 730 1.1E-118 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 Pfam PF03477 ATP cone domain 6 92 3.2E-16 T 22-04-2016 IPR005144 ATP-cone domain R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 734 2.2E-175 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 PANTHER PTHR11573:SF17 6 750 0.0 T 22-04-2016 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 2.2E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 2.2E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 2.2E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 2.2E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 2.2E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 2.2E-36 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 PANTHER PTHR11573 6 750 0.0 T 22-04-2016 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 SUPERFAMILY SSF51998 222 740 1.01E-162 T 22-04-2016 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 Gene3D G3DSA:3.20.70.20 398 559 1.1E-42 T 22-04-2016 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 Gene3D G3DSA:3.20.70.20 135 344 1.1E-42 T 22-04-2016 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 Gene3D G3DSA:3.20.70.20 610 699 1.1E-42 T 22-04-2016 R615_RS05200 4034fb44c0e3915ce523823e1ea894b8 758 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 7.7E-12 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 R615_RS10590 914091888b5a95c8b6d62fa2a0116d09 295 SUPERFAMILY SSF53335 16 263 2.3E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS10590 914091888b5a95c8b6d62fa2a0116d09 295 Pfam PF13649 Methyltransferase domain 96 168 3.5E-11 T 22-04-2016 R615_RS10590 914091888b5a95c8b6d62fa2a0116d09 295 Gene3D G3DSA:3.40.50.150 78 168 5.1E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS10590 914091888b5a95c8b6d62fa2a0116d09 295 PANTHER PTHR10108 27 167 2.2E-29 T 22-04-2016 R615_RS10590 914091888b5a95c8b6d62fa2a0116d09 295 PANTHER PTHR10108:SF886 27 167 2.2E-29 T 22-04-2016 R615_RS10590 914091888b5a95c8b6d62fa2a0116d09 295 PIRSF PIRSF018249 5 283 7.3E-70 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 42 238 1.3E-83 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PANTHER PTHR30587 32 240 1.7E-116 T 22-04-2016 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 Pfam PF00813 FliP family 42 234 2.4E-77 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 215 227 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 167 182 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PANTHER PTHR30587:SF0 32 240 1.7E-116 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 40 59 3.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 188 209 3.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 167 187 3.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 59 79 3.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 212 237 3.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 79 98 3.6E-67 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 138 150 4.0E-21 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 110 124 4.0E-21 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 172 4.0E-21 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 38 47 4.0E-21 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 228 238 4.0E-21 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 R615_RS05070 578707b2f6c35d822b53500faa6054c4 241 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 98 110 4.0E-21 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 R615_RS11020 49e586846d322b5bb16189334c671ac1 409 Gene3D G3DSA:1.20.1250.20 8 204 4.0E-12 T 22-04-2016 R615_RS11020 49e586846d322b5bb16189334c671ac1 409 Gene3D G3DSA:1.20.1250.20 221 395 2.6E-13 T 22-04-2016 R615_RS11020 49e586846d322b5bb16189334c671ac1 409 SUPERFAMILY SSF103473 8 397 6.41E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS11020 49e586846d322b5bb16189334c671ac1 409 Pfam PF07690 Major Facilitator Superfamily 13 344 3.0E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 R615_RS11020 49e586846d322b5bb16189334c671ac1 409 PANTHER PTHR12778 9 399 8.4E-67 T 22-04-2016 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 1.6E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 464 1.6E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 Pfam PF00158 Sigma-54 interaction domain 139 306 5.8E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 Gene3D G3DSA:1.10.8.60 312 385 1.1E-22 T 22-04-2016 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 SMART SM00382 159 302 4.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 SMART SM00448 2 113 5.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 PANTHER PTHR32071:SF15 1 474 2.7E-238 T 22-04-2016 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 Pfam PF02954 Bacterial regulatory protein, Fis family 422 461 3.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 SUPERFAMILY SSF52172 2 184 3.27E-43 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 SUPERFAMILY SSF46689 379 464 5.38E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 SUPERFAMILY SSF52540 138 382 2.21E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 Pfam PF00072 Response regulator receiver domain 4 113 5.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 Gene3D G3DSA:1.10.10.60 395 464 1.7E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 461 6.5E-227 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 PANTHER PTHR32071 1 474 2.7E-238 T 22-04-2016 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 Gene3D G3DSA:3.40.50.2300 1 119 4.4E-34 T 22-04-2016 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 R615_RS02830 9c40d313ea7b62ea95af005b21f8073f 474 Gene3D G3DSA:3.40.50.300 136 310 6.2E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 PIRSF PIRSF001369 3 375 2.7E-115 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 1.3E-114 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 SUPERFAMILY SSF48256 11 368 1.7E-123 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 PRINTS PR00143 Citrate synthase signature 176 191 1.4E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 PRINTS PR00143 Citrate synthase signature 251 271 1.4E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 PRINTS PR00143 Citrate synthase signature 328 342 1.4E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 PRINTS PR00143 Citrate synthase signature 126 139 1.4E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 PRINTS PR00143 Citrate synthase signature 308 324 1.4E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 PRINTS PR00143 Citrate synthase signature 198 226 1.4E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 Gene3D G3DSA:1.10.230.10 237 322 4.2E-28 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 Gene3D G3DSA:1.10.580.10 17 236 9.4E-76 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 PANTHER PTHR11739:SF4 11 375 6.0E-151 T 22-04-2016 R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 1.4E-153 T 22-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 R615_RS09155 125f828741e0b510ccddfe90c7e2a544 375 PANTHER PTHR11739 11 375 6.0E-151 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 Pfam PF07696 7TMR-DISM extracellular 2 48 180 2.8E-28 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 SMART SM00388 555 623 5.6E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 671 780 3.5E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 Gene3D G3DSA:1.10.287.130 550 599 1.1E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 SUPERFAMILY SSF55874 643 780 1.44E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 SUPERFAMILY SSF55785 414 536 2.09E-8 T 22-04-2016 IPR000014 PAS domain R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 424 543 8.1E-8 T 22-04-2016 IPR000014 PAS domain R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 Gene3D G3DSA:3.30.450.20 417 536 2.9E-9 T 22-04-2016 R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 Pfam PF07695 7TM diverse intracellular signalling 194 397 6.5E-49 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 Pfam PF00989 PAS fold 425 524 1.2E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 PANTHER PTHR24423 7 22 1.8E-29 T 22-04-2016 R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 PANTHER PTHR24423 422 764 1.8E-29 T 22-04-2016 R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 PANTHER PTHR24423 55 74 1.8E-29 T 22-04-2016 R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 SMART SM00387 668 782 8.1E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 Gene3D G3DSA:3.30.565.10 634 779 7.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS10215 a9b7bcd54332f487e669dfd7093f773e 792 SUPERFAMILY SSF47384 549 599 2.55E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS04200 ec3ab5f537fd6bd308dc859b1de94f41 468 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 14 445 3.2E-220 T 22-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 R615_RS04200 ec3ab5f537fd6bd308dc859b1de94f41 468 Gene3D G3DSA:2.30.170.30 4 56 5.8E-24 T 22-04-2016 R615_RS04200 ec3ab5f537fd6bd308dc859b1de94f41 468 Gene3D G3DSA:1.10.220.70 57 143 1.4E-39 T 22-04-2016 R615_RS04200 ec3ab5f537fd6bd308dc859b1de94f41 468 Gene3D G3DSA:3.20.20.70 145 445 2.5E-164 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS04200 ec3ab5f537fd6bd308dc859b1de94f41 468 PANTHER PTHR39329 5 462 2.0E-278 T 22-04-2016 R615_RS04200 ec3ab5f537fd6bd308dc859b1de94f41 468 PIRSF PIRSF018788 3 461 4.8E-235 T 22-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 R615_RS04200 ec3ab5f537fd6bd308dc859b1de94f41 468 PANTHER PTHR39329:SF1 5 462 2.0E-278 T 22-04-2016 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 7.6E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 7.6E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 7.6E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 175 196 7.6E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 205 229 7.6E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 7.6E-42 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 208 222 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 Gene3D G3DSA:3.40.190.80 150 262 7.1E-29 T 22-04-2016 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 SUPERFAMILY SSF56655 5 231 4.32E-71 T 22-04-2016 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 Pfam PF00459 Inositol monophosphatase family 5 227 1.7E-57 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 Gene3D G3DSA:3.30.540.10 3 149 6.1E-49 T 22-04-2016 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 PANTHER PTHR20854:SF4 1 277 1.8E-81 T 22-04-2016 R615_RS15400 75a33429056ec39884f4f477ba4cb0e7 284 PANTHER PTHR20854 1 277 1.8E-81 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 R615_RS04540 702b3664c166683214150ee9631e7a60 583 SUPERFAMILY SSF116734 323 347 6.38E-32 T 22-04-2016 R615_RS04540 702b3664c166683214150ee9631e7a60 583 SUPERFAMILY SSF116734 85 264 6.38E-32 T 22-04-2016 R615_RS04540 702b3664c166683214150ee9631e7a60 583 SUPERFAMILY SSF116734 369 578 5.07E-34 T 22-04-2016 R615_RS04540 702b3664c166683214150ee9631e7a60 583 Pfam PF01420 Type I restriction modification DNA specificity domain 128 265 2.1E-14 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 R615_RS04540 702b3664c166683214150ee9631e7a60 583 Pfam PF01420 Type I restriction modification DNA specificity domain 385 564 4.6E-12 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 R615_RS04540 702b3664c166683214150ee9631e7a60 583 PANTHER PTHR30408 374 583 3.0E-14 T 22-04-2016 R615_RS04540 702b3664c166683214150ee9631e7a60 583 PANTHER PTHR30408:SF2 374 583 3.0E-14 T 22-04-2016 R615_RS12920 f0b970d04f66ba0af098ea24bbcb8bd8 132 PANTHER PTHR34039 16 132 3.5E-40 T 22-04-2016 R615_RS12920 f0b970d04f66ba0af098ea24bbcb8bd8 132 Pfam PF02021 Uncharacterised protein family UPF0102 28 116 3.2E-25 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 R615_RS12920 f0b970d04f66ba0af098ea24bbcb8bd8 132 SUPERFAMILY SSF52980 21 122 1.47E-19 T 22-04-2016 IPR011335 Restriction endonuclease type II-like R615_RS12920 f0b970d04f66ba0af098ea24bbcb8bd8 132 Gene3D G3DSA:3.40.1350.10 28 132 1.7E-33 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 R615_RS12920 f0b970d04f66ba0af098ea24bbcb8bd8 132 PANTHER PTHR34039:SF1 16 132 3.5E-40 T 22-04-2016 R615_RS12920 f0b970d04f66ba0af098ea24bbcb8bd8 132 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 21 132 9.0E-27 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 R615_RS12920 f0b970d04f66ba0af098ea24bbcb8bd8 132 Hamap MF_00048 UPF0102 protein YraN [yraN]. 20 131 21.912 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 R615_RS04340 554ba53198f786237395ca5dc8932017 536 Pfam PF13007 Transposase C of IS166 homeodomain 51 131 8.5E-14 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain R615_RS04340 554ba53198f786237395ca5dc8932017 536 PANTHER PTHR33678:SF1 22 528 3.0E-90 T 22-04-2016 R615_RS04340 554ba53198f786237395ca5dc8932017 536 PANTHER PTHR33678 22 528 3.0E-90 T 22-04-2016 R615_RS04340 554ba53198f786237395ca5dc8932017 536 Pfam PF13005 zinc-finger binding domain of transposase IS66 140 182 3.5E-11 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 R615_RS04340 554ba53198f786237395ca5dc8932017 536 Pfam PF03050 Transposase IS66 family 197 485 1.6E-100 T 22-04-2016 IPR004291 Transposase, IS66 R615_RS04340 554ba53198f786237395ca5dc8932017 536 Pfam PF13817 IS66 C-terminal element 491 528 8.8E-16 T 22-04-2016 R615_RS08220 3e9d4b322d142abcf3673df7658a3532 234 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 232 2.4E-87 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS08220 3e9d4b322d142abcf3673df7658a3532 234 Pfam PF00929 Exonuclease 4 164 1.3E-34 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III R615_RS08220 3e9d4b322d142abcf3673df7658a3532 234 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 214 2.0E-69 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS08220 3e9d4b322d142abcf3673df7658a3532 234 SUPERFAMILY SSF53098 2 174 1.76E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS08220 3e9d4b322d142abcf3673df7658a3532 234 PANTHER PTHR30231 2 232 1.1E-106 T 22-04-2016 R615_RS08220 3e9d4b322d142abcf3673df7658a3532 234 PANTHER PTHR30231:SF0 2 232 1.1E-106 T 22-04-2016 R615_RS08220 3e9d4b322d142abcf3673df7658a3532 234 SMART SM00479 2 173 1.6E-46 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III R615_RS08220 3e9d4b322d142abcf3673df7658a3532 234 Gene3D G3DSA:3.30.420.10 2 173 1.5E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS01685 4c780f444d91deab777da6cedc929e1b 172 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 10 162 7.6E-61 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 R615_RS01685 4c780f444d91deab777da6cedc929e1b 172 PIRSF PIRSF028301 1 172 9.1E-65 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 R615_RS01685 4c780f444d91deab777da6cedc929e1b 172 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 7 162 1.2E-61 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 R615_RS01685 4c780f444d91deab777da6cedc929e1b 172 PANTHER PTHR35850 1 161 1.2E-60 T 22-04-2016 R615_RS01685 4c780f444d91deab777da6cedc929e1b 172 PANTHER PTHR35850:SF1 1 161 1.2E-60 T 22-04-2016 R615_RS06250 88f07e9164856d99fcad1521a79982e4 228 Gene3D G3DSA:3.40.50.170 17 211 2.7E-67 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS06250 88f07e9164856d99fcad1521a79982e4 228 Pfam PF00551 Formyl transferase 18 196 6.4E-61 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS06250 88f07e9164856d99fcad1521a79982e4 228 PANTHER PTHR10520 16 209 7.0E-88 T 22-04-2016 R615_RS06250 88f07e9164856d99fcad1521a79982e4 228 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 18 207 7.0E-74 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 R615_RS06250 88f07e9164856d99fcad1521a79982e4 228 SUPERFAMILY SSF53328 18 212 8.77E-64 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS06250 88f07e9164856d99fcad1521a79982e4 228 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 149 172 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 R615_RS06250 88f07e9164856d99fcad1521a79982e4 228 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 18 203 29.796 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 R615_RS01170 9abbaa389c7477d4e8f1466f499b36c7 276 Gene3D G3DSA:3.10.310.10 121 264 2.4E-48 T 22-04-2016 R615_RS01170 9abbaa389c7477d4e8f1466f499b36c7 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS01170 9abbaa389c7477d4e8f1466f499b36c7 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.413 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS01170 9abbaa389c7477d4e8f1466f499b36c7 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 1.4E-93 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS01170 9abbaa389c7477d4e8f1466f499b36c7 276 Pfam PF01678 Diaminopimelate epimerase 5 125 2.3E-35 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS01170 9abbaa389c7477d4e8f1466f499b36c7 276 Pfam PF01678 Diaminopimelate epimerase 155 268 4.2E-28 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS01170 9abbaa389c7477d4e8f1466f499b36c7 276 Gene3D G3DSA:3.10.310.10 2 120 7.1E-56 T 22-04-2016 R615_RS01170 9abbaa389c7477d4e8f1466f499b36c7 276 SUPERFAMILY SSF54506 3 274 3.7E-59 T 22-04-2016 R615_RS01170 9abbaa389c7477d4e8f1466f499b36c7 276 PANTHER PTHR31689 1 274 3.6E-131 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS01170 9abbaa389c7477d4e8f1466f499b36c7 276 PANTHER PTHR31689:SF0 1 274 3.6E-131 T 22-04-2016 R615_RS05185 eaf71c1c48f695370abc08e954b498e5 157 PIRSF PIRSF000239 1 157 4.1E-21 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 R615_RS05185 eaf71c1c48f695370abc08e954b498e5 157 PANTHER PTHR10681 1 157 7.3E-51 T 22-04-2016 R615_RS05185 eaf71c1c48f695370abc08e954b498e5 157 Gene3D G3DSA:3.40.30.10 4 157 4.7E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS05185 eaf71c1c48f695370abc08e954b498e5 157 SUPERFAMILY SSF52833 6 157 1.1E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS05185 eaf71c1c48f695370abc08e954b498e5 157 Pfam PF00578 AhpC/TSA family 8 136 9.5E-39 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 R615_RS01450 54a1eeb372e9ff22fa7207476227e2b3 425 SUPERFAMILY SSF51261 136 382 2.35E-71 T 22-04-2016 IPR011055 Duplicated hybrid motif R615_RS01450 54a1eeb372e9ff22fa7207476227e2b3 425 Pfam PF01551 Peptidase family M23 287 380 1.3E-32 T 22-04-2016 IPR016047 Peptidase M23 R615_RS01450 54a1eeb372e9ff22fa7207476227e2b3 425 Gene3D G3DSA:2.70.70.10 243 384 1.7E-45 T 22-04-2016 R615_RS01450 54a1eeb372e9ff22fa7207476227e2b3 425 PANTHER PTHR21666 15 410 4.6E-83 T 22-04-2016 R615_RS01450 54a1eeb372e9ff22fa7207476227e2b3 425 PANTHER PTHR21666:SF221 15 410 4.6E-83 T 22-04-2016 R615_RS00465 0ea40d0fff0e400aebfe387e9d255381 200 PANTHER PTHR40593 46 200 6.8E-12 T 22-04-2016 R615_RS00465 0ea40d0fff0e400aebfe387e9d255381 200 Pfam PF13036 Peptidoglycan-synthase activator LpoB 14 189 3.6E-48 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB R615_RS03375 ba4fc848cd98071672b8d6c9c09b340e 151 PIRSF PIRSF001399 1 147 1.3E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 R615_RS03375 ba4fc848cd98071672b8d6c9c09b340e 151 PANTHER PTHR21272 1 150 2.9E-91 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 R615_RS03375 ba4fc848cd98071672b8d6c9c09b340e 151 Gene3D G3DSA:3.40.50.9100 2 145 9.0E-68 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 R615_RS03375 ba4fc848cd98071672b8d6c9c09b340e 151 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 151 74.152 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 R615_RS03375 ba4fc848cd98071672b8d6c9c09b340e 151 SUPERFAMILY SSF52304 3 146 3.4E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 R615_RS03375 ba4fc848cd98071672b8d6c9c09b340e 151 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 147 2.0E-48 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 R615_RS03375 ba4fc848cd98071672b8d6c9c09b340e 151 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 143 6.7E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 R615_RS03375 ba4fc848cd98071672b8d6c9c09b340e 151 Pfam PF01220 Dehydroquinase class II 3 139 8.2E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 R615_RS03375 ba4fc848cd98071672b8d6c9c09b340e 151 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 R615_RS02705 c7a835cfe8f5bbda84c7360c595840d4 79 SUPERFAMILY SSF55166 15 67 5.41E-5 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain R615_RS02705 c7a835cfe8f5bbda84c7360c595840d4 79 Gene3D G3DSA:3.30.1380.10 14 77 1.4E-6 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain R615_RS04995 2b5ff2b8b7b9dbe48e1731e5552ea09d 120 Gene3D G3DSA:3.40.50.2300 1 119 5.5E-39 T 22-04-2016 R615_RS04995 2b5ff2b8b7b9dbe48e1731e5552ea09d 120 PANTHER PTHR26402 2 119 7.7E-45 T 22-04-2016 R615_RS04995 2b5ff2b8b7b9dbe48e1731e5552ea09d 120 SMART SM00448 2 115 1.2E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS04995 2b5ff2b8b7b9dbe48e1731e5552ea09d 120 Pfam PF00072 Response regulator receiver domain 4 115 2.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS04995 2b5ff2b8b7b9dbe48e1731e5552ea09d 120 SUPERFAMILY SSF52172 1 120 7.68E-40 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS13120 3d69fcd4420475fa650896a29468028f 386 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 14 370 1.3E-116 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 R615_RS13120 3d69fcd4420475fa650896a29468028f 386 PANTHER PTHR30474 8 376 2.5E-138 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 R615_RS13120 3d69fcd4420475fa650896a29468028f 386 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 329 353 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 R615_RS13120 3d69fcd4420475fa650896a29468028f 386 PANTHER PTHR30474:SF2 8 376 2.5E-138 T 22-04-2016 R615_RS13120 3d69fcd4420475fa650896a29468028f 386 Pfam PF01098 Cell cycle protein 13 372 1.1E-96 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 R615_RS13120 3d69fcd4420475fa650896a29468028f 386 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 11 379 35.751 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 R615_RS09830 61118df7cbc7df00f3ff7ab31ea86a44 312 Gene3D G3DSA:3.40.50.2300 179 308 1.0E-24 T 22-04-2016 R615_RS09830 61118df7cbc7df00f3ff7ab31ea86a44 312 Pfam PF00072 Response regulator receiver domain 182 297 1.5E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS09830 61118df7cbc7df00f3ff7ab31ea86a44 312 SUPERFAMILY SSF50341 16 159 6.41E-37 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS09830 61118df7cbc7df00f3ff7ab31ea86a44 312 SMART SM00448 180 301 1.7E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS09830 61118df7cbc7df00f3ff7ab31ea86a44 312 PIRSF PIRSF002867 1 309 1.1E-101 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV R615_RS09830 61118df7cbc7df00f3ff7ab31ea86a44 312 SMART SM00260 17 154 1.4E-25 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS09830 61118df7cbc7df00f3ff7ab31ea86a44 312 Pfam PF01584 CheW-like domain 21 156 7.5E-36 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS09830 61118df7cbc7df00f3ff7ab31ea86a44 312 SUPERFAMILY SSF52172 178 307 2.56E-22 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS09830 61118df7cbc7df00f3ff7ab31ea86a44 312 Gene3D G3DSA:2.40.50.180 60 92 9.4E-6 T 22-04-2016 R615_RS09830 61118df7cbc7df00f3ff7ab31ea86a44 312 PANTHER PTHR22617 1 170 1.1E-71 T 22-04-2016 R615_RS09830 61118df7cbc7df00f3ff7ab31ea86a44 312 PANTHER PTHR22617:SF30 1 170 1.1E-71 T 22-04-2016 R615_RS09830 61118df7cbc7df00f3ff7ab31ea86a44 312 Gene3D G3DSA:2.30.30.40 93 145 2.7E-5 T 22-04-2016 R615_RS06060 63ca462def44fa51be23c83acffe93fa 222 Gene3D G3DSA:3.40.50.1000 91 216 2.4E-38 T 22-04-2016 IPR023214 HAD-like domain R615_RS06060 63ca462def44fa51be23c83acffe93fa 222 Gene3D G3DSA:3.40.50.1000 4 25 2.4E-38 T 22-04-2016 IPR023214 HAD-like domain R615_RS06060 63ca462def44fa51be23c83acffe93fa 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 186 3.5E-32 T 22-04-2016 IPR023214 HAD-like domain R615_RS06060 63ca462def44fa51be23c83acffe93fa 222 PANTHER PTHR18901:SF24 1 217 2.3E-66 T 22-04-2016 R615_RS06060 63ca462def44fa51be23c83acffe93fa 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 99 185 9.5E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS06060 63ca462def44fa51be23c83acffe93fa 222 SUPERFAMILY SSF56784 7 217 4.57E-51 T 22-04-2016 IPR023214 HAD-like domain R615_RS06060 63ca462def44fa51be23c83acffe93fa 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 94 181 1.9E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS06060 63ca462def44fa51be23c83acffe93fa 222 PANTHER PTHR18901 1 217 2.3E-66 T 22-04-2016 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 SUPERFAMILY SSF51419 11 232 8.64E-60 T 22-04-2016 IPR029066 PLP-binding barrel R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 SMART SM01005 231 355 2.0E-64 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 Gene3D G3DSA:2.40.37.10 211 355 5.1E-55 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 PANTHER PTHR30511 1 353 9.7E-126 T 22-04-2016 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 Pfam PF00842 Alanine racemase, C-terminal domain 231 353 7.7E-40 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 Pfam PF01168 Alanine racemase, N-terminal domain 12 217 7.1E-56 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 PANTHER PTHR30511:SF0 1 353 9.7E-126 T 22-04-2016 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 SUPERFAMILY SSF50621 225 355 6.63E-47 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 PRINTS PR00992 Alanine racemase signature 247 262 4.9E-62 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 PRINTS PR00992 Alanine racemase signature 337 350 4.9E-62 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 PRINTS PR00992 Alanine racemase signature 61 79 4.9E-62 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 PRINTS PR00992 Alanine racemase signature 285 302 4.9E-62 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 PRINTS PR00992 Alanine racemase signature 264 279 4.9E-62 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 PRINTS PR00992 Alanine racemase signature 121 133 4.9E-62 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 PRINTS PR00992 Alanine racemase signature 190 217 4.9E-62 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 PRINTS PR00992 Alanine racemase signature 155 166 4.9E-62 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 PRINTS PR00992 Alanine racemase signature 26 42 4.9E-62 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 Hamap MF_01201 Alanine racemase. 2 355 32.102 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 Gene3D G3DSA:3.20.20.10 12 210 1.8E-58 T 22-04-2016 IPR029066 PLP-binding barrel R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS15285 14ff24df45bcaf4d3533a03fed42f52b 356 TIGRFAM TIGR00492 alr: alanine racemase 8 355 5.9E-99 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS10725 58aafcdd2e453659399474d78c8d1582 302 PANTHER PTHR30081 4 301 3.5E-77 T 22-04-2016 R615_RS10725 58aafcdd2e453659399474d78c8d1582 302 SUPERFAMILY SSF82866 111 280 4.97E-36 T 22-04-2016 R615_RS10725 58aafcdd2e453659399474d78c8d1582 302 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 4 287 28.227 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 R615_RS10725 58aafcdd2e453659399474d78c8d1582 302 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 32 276 2.7E-76 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 R615_RS10725 58aafcdd2e453659399474d78c8d1582 302 Gene3D G3DSA:1.20.1640.10 120 280 4.3E-26 T 22-04-2016 R615_RS10725 58aafcdd2e453659399474d78c8d1582 302 Pfam PF07549 SecD/SecF GG Motif 27 53 6.2E-12 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site R615_RS10725 58aafcdd2e453659399474d78c8d1582 302 Pfam PF02355 Protein export membrane protein 106 283 2.2E-64 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial R615_RS10725 58aafcdd2e453659399474d78c8d1582 302 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 95 273 8.3E-53 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial R615_RS10725 58aafcdd2e453659399474d78c8d1582 302 PRINTS PR01755 Bacterial translocase SecF protein signature 144 158 5.8E-30 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial R615_RS10725 58aafcdd2e453659399474d78c8d1582 302 PRINTS PR01755 Bacterial translocase SecF protein signature 192 210 5.8E-30 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial R615_RS10725 58aafcdd2e453659399474d78c8d1582 302 PRINTS PR01755 Bacterial translocase SecF protein signature 31 46 5.8E-30 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial R615_RS10725 58aafcdd2e453659399474d78c8d1582 302 PRINTS PR01755 Bacterial translocase SecF protein signature 224 239 5.8E-30 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial R615_RS17320 1d92116b29cfcbd2f0be9127002fc10a 449 PANTHER PTHR37533:SF1 299 401 3.7E-41 T 22-04-2016 R615_RS17320 1d92116b29cfcbd2f0be9127002fc10a 449 Pfam PF02120 Flagellar hook-length control protein FliK 326 406 1.2E-24 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal R615_RS17320 1d92116b29cfcbd2f0be9127002fc10a 449 PANTHER PTHR37533 299 401 3.7E-41 T 22-04-2016 R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 SUPERFAMILY SSF55874 248 389 3.27E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 PANTHER PTHR24423:SF474 52 390 1.8E-60 T 22-04-2016 R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 Gene3D G3DSA:1.10.287.130 171 239 3.3E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 Gene3D G3DSA:3.30.450.20 60 119 8.8E-6 T 22-04-2016 R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 SUPERFAMILY SSF47384 167 242 1.04E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 390 9.4E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 SMART SM00387 285 392 7.0E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 SMART SM00388 177 243 6.4E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 PANTHER PTHR24423 52 390 1.8E-60 T 22-04-2016 R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 351 1.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 370 1.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 337 1.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 Gene3D G3DSA:3.30.565.10 247 390 2.6E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 SUPERFAMILY SSF55785 54 154 2.48E-6 T 22-04-2016 IPR000014 PAS domain R615_RS04950 effe4d88ef3a7c377dd256fa38bade35 393 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 242 2.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 SUPERFAMILY SSF55347 135 300 5.75E-53 T 22-04-2016 R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 Gene3D G3DSA:3.30.70.260 350 417 1.3E-10 T 22-04-2016 R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 SUPERFAMILY SSF55021 349 417 1.7E-12 T 22-04-2016 R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 PIRSF PIRSF000098 1 431 6.8E-162 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 Pfam PF00742 Homoserine dehydrogenase 135 313 7.7E-64 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 127 2.8E-20 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 PANTHER PTHR21499 4 365 1.2E-130 T 22-04-2016 R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 Gene3D G3DSA:3.30.360.10 147 296 2.7E-56 T 22-04-2016 R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 Pfam PF01842 ACT domain 350 417 1.8E-12 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 SUPERFAMILY SSF51735 2 156 1.78E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 Gene3D G3DSA:3.40.50.720 2 146 2.2E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 PANTHER PTHR21499:SF2 4 365 1.2E-130 T 22-04-2016 R615_RS05525 4c1b16a05f0b48cffac52c1f3016f634 432 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 181 203 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 R615_RS00765 feb08780b4faf4b1f041a3bcf3b21e98 245 PANTHER PTHR12029:SF45 1 187 5.1E-60 T 22-04-2016 R615_RS00765 feb08780b4faf4b1f041a3bcf3b21e98 245 Pfam PF12105 SpoU, rRNA methylase, C-terminal 164 215 9.9E-22 T 22-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 R615_RS00765 feb08780b4faf4b1f041a3bcf3b21e98 245 PANTHER PTHR12029 1 187 5.1E-60 T 22-04-2016 R615_RS00765 feb08780b4faf4b1f041a3bcf3b21e98 245 SUPERFAMILY SSF75217 4 187 6.15E-47 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases R615_RS00765 feb08780b4faf4b1f041a3bcf3b21e98 245 Gene3D G3DSA:3.40.1280.10 5 188 2.7E-46 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal R615_RS00765 feb08780b4faf4b1f041a3bcf3b21e98 245 Pfam PF00588 SpoU rRNA Methylase family 20 158 8.8E-33 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 2.3E-35 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 PIRSF PIRSF000804 1 366 1.9E-123 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 5.4E-108 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 SUPERFAMILY SSF55979 246 366 1.71E-34 T 22-04-2016 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 365 1.9E-35 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 PANTHER PTHR30478 2 366 1.8E-134 T 22-04-2016 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 Gene3D G3DSA:3.10.150.10 1 121 4.3E-37 T 22-04-2016 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 SUPERFAMILY SSF55979 1 121 1.83E-31 T 22-04-2016 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 Gene3D G3DSA:3.10.150.10 124 248 1.8E-37 T 22-04-2016 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.2E-40 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 SUPERFAMILY SSF55979 126 244 6.0E-30 T 22-04-2016 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 Gene3D G3DSA:3.10.150.10 249 366 3.3E-34 T 22-04-2016 R615_RS00010 8b03a5218b6a41ff71d062b50acfc824 366 SMART SM00480 17 362 3.7E-140 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS15770 11b0ed7cfeeb60c12e3d7e418af68279 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS15770 11b0ed7cfeeb60c12e3d7e418af68279 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.6E-30 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15770 11b0ed7cfeeb60c12e3d7e418af68279 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 3.9E-52 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15770 11b0ed7cfeeb60c12e3d7e418af68279 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.353 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15770 11b0ed7cfeeb60c12e3d7e418af68279 118 PIRSF PIRSF002134 1 118 6.0E-40 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15770 11b0ed7cfeeb60c12e3d7e418af68279 118 SUPERFAMILY SSF46946 2 114 1.62E-43 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 R615_RS15770 11b0ed7cfeeb60c12e3d7e418af68279 118 PANTHER PTHR10871 1 118 8.5E-65 T 22-04-2016 R615_RS15770 11b0ed7cfeeb60c12e3d7e418af68279 118 Gene3D G3DSA:1.10.8.50 1 71 3.9E-29 T 22-04-2016 R615_RS15770 11b0ed7cfeeb60c12e3d7e418af68279 118 Gene3D G3DSA:4.10.910.10 72 118 2.8E-24 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal R615_RS11200 0dd309bd5296f3f1a7eb74df55c04ebe 64 Gene3D G3DSA:1.10.10.620 1 62 4.4E-22 T 22-04-2016 IPR023200 Ribosome modulation factor-like domain R615_RS11200 0dd309bd5296f3f1a7eb74df55c04ebe 64 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 48 6.0E-7 T 22-04-2016 IPR007040 Ribosome modulation factor R615_RS11200 0dd309bd5296f3f1a7eb74df55c04ebe 64 Pfam PF04957 Ribosome modulation factor 1 52 4.5E-22 T 22-04-2016 IPR007040 Ribosome modulation factor R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 PANTHER PTHR11707:SF28 2 331 1.8E-120 T 22-04-2016 R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 SMART SM00870 4 321 2.4E-98 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 Pfam PF00710 Asparaginase, N-terminal 4 188 2.3E-59 T 22-04-2016 IPR027474 L-asparaginase, N-terminal R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 80 90 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 PANTHER PTHR11707 2 331 1.8E-120 T 22-04-2016 R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 PIRSF PIRSF500176 1 330 3.5E-90 T 22-04-2016 R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 PIRSF PIRSF001220 1 331 1.8E-76 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 Gene3D G3DSA:3.40.50.1170 3 191 6.1E-65 T 22-04-2016 IPR027474 L-asparaginase, N-terminal R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 331 1.2E-84 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 SUPERFAMILY SSF53774 2 332 1.57E-94 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 PRINTS PR00139 Asparaginase/glutaminase family signature 258 276 2.8E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 PRINTS PR00139 Asparaginase/glutaminase family signature 79 97 2.8E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 2.8E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 R615_RS11840 b023e44ba30ae6dc6053e04d38fdef97 333 Gene3D G3DSA:3.40.50.40 206 332 7.6E-40 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain R615_RS03935 55f0aef7a8a97a5b263d56c72e48d44b 143 Gene3D G3DSA:2.30.30.180 78 138 4.6E-13 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal R615_RS03935 55f0aef7a8a97a5b263d56c72e48d44b 143 SUPERFAMILY SSF74942 74 141 2.88E-18 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal R615_RS03935 55f0aef7a8a97a5b263d56c72e48d44b 143 Pfam PF02576 Putative ribosome maturation factor RimP 1 137 1.1E-47 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 R615_RS03935 55f0aef7a8a97a5b263d56c72e48d44b 143 Gene3D G3DSA:3.30.300.70 1 70 1.4E-29 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal R615_RS03935 55f0aef7a8a97a5b263d56c72e48d44b 143 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 3 141 21.799 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 R615_RS03935 55f0aef7a8a97a5b263d56c72e48d44b 143 SUPERFAMILY SSF75420 2 73 1.44E-23 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal R615_RS03935 55f0aef7a8a97a5b263d56c72e48d44b 143 PANTHER PTHR33867 1 141 1.4E-49 T 22-04-2016 R615_RS03935 55f0aef7a8a97a5b263d56c72e48d44b 143 PANTHER PTHR33867:SF1 1 141 1.4E-49 T 22-04-2016 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 Gene3D G3DSA:3.30.420.110 126 255 1.1E-40 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 SUPERFAMILY SSF53150 114 266 4.71E-42 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 Gene3D G3DSA:3.40.50.300 568 796 1.2E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 850 24.708 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 855 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 Gene3D G3DSA:3.40.1170.10 3 121 4.5E-51 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 SUPERFAMILY SSF48334 267 562 1.44E-85 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 Gene3D G3DSA:1.10.1420.10 316 476 5.3E-52 T 22-04-2016 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 PIRSF PIRSF037677 1 835 1.1E-148 T 22-04-2016 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 Pfam PF01624 MutS domain I 8 119 1.1E-42 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 Pfam PF05190 MutS family domain IV 427 517 4.5E-30 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 SUPERFAMILY SSF55271 3 113 7.06E-42 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 SMART SM00533 283 590 5.8E-94 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 SUPERFAMILY SSF52540 567 796 3.19E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 Pfam PF05192 MutS domain III 270 558 2.2E-36 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 PANTHER PTHR11361:SF86 2 797 0.0 T 22-04-2016 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 Pfam PF00488 MutS domain V 609 796 4.3E-84 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 PANTHER PTHR11361 2 797 0.0 T 22-04-2016 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 Pfam PF05188 MutS domain II 128 253 2.4E-25 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 R615_RS14415 869cf674583aac9c7cfe01cfdd598d3f 858 SMART SM00534 606 793 2.3E-114 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 R615_RS13715 4cf5ed9717d68814e0921bdd12c0faa7 370 Gene3D G3DSA:2.40.160.10 71 356 6.1E-14 T 22-04-2016 IPR023614 Porin domain R615_RS13715 4cf5ed9717d68814e0921bdd12c0faa7 370 SUPERFAMILY SSF56935 51 370 4.58E-34 T 22-04-2016 R615_RS13715 4cf5ed9717d68814e0921bdd12c0faa7 370 Pfam PF13609 Gram-negative porin 50 356 1.1E-7 T 22-04-2016 R615_RS16415 835f3e1b21e239cd12c3b4377fbb34df 545 PANTHER PTHR11795:SF349 85 540 9.9E-149 T 22-04-2016 R615_RS16415 835f3e1b21e239cd12c3b4377fbb34df 545 Pfam PF02653 Branched-chain amino acid transport system / permease component 255 526 2.0E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 R615_RS16415 835f3e1b21e239cd12c3b4377fbb34df 545 PANTHER PTHR11795 85 540 9.9E-149 T 22-04-2016 R615_RS16415 835f3e1b21e239cd12c3b4377fbb34df 545 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 253 540 1.6E-128 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type R615_RS12825 33f68ee5183e8816ae8a1ea8c57ffb6f 179 SUPERFAMILY SSF53041 1 135 2.75E-42 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 R615_RS12825 33f68ee5183e8816ae8a1ea8c57ffb6f 179 Pfam PF00239 Resolvase, N terminal domain 3 133 2.5E-41 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 R615_RS12825 33f68ee5183e8816ae8a1ea8c57ffb6f 179 Gene3D G3DSA:1.10.10.60 135 177 6.5E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS12825 33f68ee5183e8816ae8a1ea8c57ffb6f 179 SMART SM00857 3 135 4.9E-54 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 R615_RS12825 33f68ee5183e8816ae8a1ea8c57ffb6f 179 PANTHER PTHR30461:SF9 1 178 7.4E-65 T 22-04-2016 R615_RS12825 33f68ee5183e8816ae8a1ea8c57ffb6f 179 Pfam PF13384 Homeodomain-like domain 149 178 2.4E-6 T 22-04-2016 R615_RS12825 33f68ee5183e8816ae8a1ea8c57ffb6f 179 PANTHER PTHR30461 1 178 7.4E-65 T 22-04-2016 R615_RS12825 33f68ee5183e8816ae8a1ea8c57ffb6f 179 Gene3D G3DSA:3.40.50.1390 3 118 7.4E-40 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 R615_RS12825 33f68ee5183e8816ae8a1ea8c57ffb6f 179 ProSitePatterns PS00398 Site-specific recombinases signature 2. 54 66 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 R615_RS12825 33f68ee5183e8816ae8a1ea8c57ffb6f 179 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PANTHER PTHR22912:SF107 200 513 9.2E-199 T 22-04-2016 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 214 495 1.0E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 1.5E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 267 277 1.5E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 1.5E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 247 262 1.5E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 1.5E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 1.5E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 1.5E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 215 237 1.5E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 1.5E-65 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 2.8E-40 T 22-04-2016 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 2.8E-40 T 22-04-2016 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 216 235 2.8E-40 T 22-04-2016 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 2.8E-40 T 22-04-2016 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 2.8E-40 T 22-04-2016 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 Pfam PF13192 Thioredoxin domain 121 195 3.9E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 SUPERFAMILY SSF52833 1 102 3.35E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 Gene3D G3DSA:3.50.50.60 214 339 1.1E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PIRSF PIRSF000238 1 517 4.5E-252 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 SUPERFAMILY SSF51905 207 513 1.04E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 Gene3D G3DSA:3.50.50.60 340 441 1.2E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 PANTHER PTHR22912 200 513 9.2E-199 T 22-04-2016 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 2.5E-241 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 SUPERFAMILY SSF52833 107 197 4.31E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 Gene3D G3DSA:3.40.30.10 106 198 2.6E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 Gene3D G3DSA:3.50.50.60 442 514 4.7E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14715 f9dfbd8240d136043a88fdb243818930 517 Gene3D G3DSA:3.40.30.10 1 95 2.2E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS07090 70dde01744fa3d27e567701197b8d1d6 134 Pfam PF03092 BT1 family 29 123 3.5E-5 T 22-04-2016 IPR004324 Folate-biopterin transporter GO:0006810|GO:0016021 R615_RS13305 498126a579a8b4d7d08204116acb6f56 480 Pfam PF00128 Alpha amylase, catalytic domain 35 237 1.5E-12 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 R615_RS13305 498126a579a8b4d7d08204116acb6f56 480 SUPERFAMILY SSF51445 5 424 9.24E-63 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily R615_RS13305 498126a579a8b4d7d08204116acb6f56 480 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 5 465 8.5E-151 T 22-04-2016 IPR022527 Sucrose phosphorylase, GftA GO:0005985|GO:0009018 R615_RS13305 498126a579a8b4d7d08204116acb6f56 480 PANTHER PTHR10357:SF132 343 441 5.8E-61 T 22-04-2016 R615_RS13305 498126a579a8b4d7d08204116acb6f56 480 PANTHER PTHR10357:SF132 14 291 5.8E-61 T 22-04-2016 R615_RS13305 498126a579a8b4d7d08204116acb6f56 480 Gene3D G3DSA:3.20.20.80 5 87 5.6E-80 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 R615_RS13305 498126a579a8b4d7d08204116acb6f56 480 Gene3D G3DSA:3.20.20.80 170 422 5.6E-80 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 R615_RS13305 498126a579a8b4d7d08204116acb6f56 480 SMART SM00642 12 421 3.2E-4 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 R615_RS13305 498126a579a8b4d7d08204116acb6f56 480 PANTHER PTHR10357 343 441 5.8E-61 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 R615_RS13305 498126a579a8b4d7d08204116acb6f56 480 PANTHER PTHR10357 14 291 5.8E-61 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 R615_RS13305 498126a579a8b4d7d08204116acb6f56 480 Gene3D G3DSA:3.90.400.10 88 163 6.3E-22 T 22-04-2016 R615_RS06295 01dfe0b1f3d1d86cef2e81161778c79d 347 Gene3D G3DSA:1.10.10.60 290 341 5.0E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS06295 01dfe0b1f3d1d86cef2e81161778c79d 347 PANTHER PTHR11019 241 345 2.3E-24 T 22-04-2016 R615_RS06295 01dfe0b1f3d1d86cef2e81161778c79d 347 SMART SM00342 255 337 2.5E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS06295 01dfe0b1f3d1d86cef2e81161778c79d 347 Pfam PF12833 Helix-turn-helix domain 262 338 7.3E-14 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS06295 01dfe0b1f3d1d86cef2e81161778c79d 347 SUPERFAMILY SSF46689 291 341 3.27E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS06295 01dfe0b1f3d1d86cef2e81161778c79d 347 Gene3D G3DSA:1.10.10.60 242 279 2.7E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS06295 01dfe0b1f3d1d86cef2e81161778c79d 347 PANTHER PTHR11019:SF52 241 345 2.3E-24 T 22-04-2016 R615_RS06295 01dfe0b1f3d1d86cef2e81161778c79d 347 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 35 212 3.5E-16 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS03805 1f06cc150b9f67ea3f1def284bdb31e7 143 PANTHER PTHR12901 1 143 2.1E-53 T 22-04-2016 R615_RS03805 1f06cc150b9f67ea3f1def284bdb31e7 143 Gene3D G3DSA:3.30.530.20 1 143 1.5E-43 T 22-04-2016 IPR023393 START-like domain R615_RS03805 1f06cc150b9f67ea3f1def284bdb31e7 143 SUPERFAMILY SSF55961 1 143 1.38E-35 T 22-04-2016 R615_RS03805 1f06cc150b9f67ea3f1def284bdb31e7 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 12 134 9.0E-31 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain R615_RS03805 1f06cc150b9f67ea3f1def284bdb31e7 143 PANTHER PTHR12901:SF7 1 143 2.1E-53 T 22-04-2016 R615_RS12610 f09725f1a7c6b4d8ec4e4290c67923a5 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 1.4E-34 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 R615_RS12610 f09725f1a7c6b4d8ec4e4290c67923a5 136 PANTHER PTHR30558 11 135 9.6E-33 T 22-04-2016 R615_RS02665 7bf8489378fcb744e6a8d99ab8976e2e 271 PANTHER PTHR30105 31 263 1.4E-73 T 22-04-2016 R615_RS02665 7bf8489378fcb744e6a8d99ab8976e2e 271 Pfam PF04748 Divergent polysaccharide deacetylase 35 243 3.4E-72 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ R615_RS02665 7bf8489378fcb744e6a8d99ab8976e2e 271 SUPERFAMILY SSF88713 30 239 3.78E-67 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 R615_RS02665 7bf8489378fcb744e6a8d99ab8976e2e 271 Gene3D G3DSA:3.20.20.370 25 251 1.8E-81 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 R615_RS10225 d3338086f3f889872f39e75e7b563a06 364 PANTHER PTHR23264:SF19 2 349 7.9E-154 T 22-04-2016 R615_RS10225 d3338086f3f889872f39e75e7b563a06 364 SUPERFAMILY SSF117916 8 90 6.21E-15 T 22-04-2016 R615_RS10225 d3338086f3f889872f39e75e7b563a06 364 Pfam PF01883 Domain of unknown function DUF59 8 79 3.9E-15 T 22-04-2016 IPR002744 Domain of unknown function DUF59 R615_RS10225 d3338086f3f889872f39e75e7b563a06 364 Hamap MF_02040 Iron-sulfur cluster carrier protein. 93 343 36.927 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein R615_RS10225 d3338086f3f889872f39e75e7b563a06 364 PANTHER PTHR23264 2 349 7.9E-154 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein R615_RS10225 d3338086f3f889872f39e75e7b563a06 364 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 342 4.4E-99 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein R615_RS10225 d3338086f3f889872f39e75e7b563a06 364 ProSitePatterns PS01215 Mrp family signature. 206 222 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 R615_RS10225 d3338086f3f889872f39e75e7b563a06 364 SUPERFAMILY SSF52540 91 325 9.63E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10225 d3338086f3f889872f39e75e7b563a06 364 Gene3D G3DSA:3.40.50.300 87 341 1.2E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 363 4.8E-151 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 269 287 2.4E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 223 241 2.4E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 202 222 2.4E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 Pfam PF13167 GTP-binding GTPase N-terminal 27 114 2.8E-31 T 22-04-2016 IPR025121 GTPase HflX, N-terminal R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 SUPERFAMILY SSF52540 199 372 5.97E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 PIRSF PIRSF006809 6 426 1.6E-145 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 Pfam PF16360 GTP-binding GTPase Middle Region 116 194 3.6E-30 T 22-04-2016 IPR032305 GTP-binding protein, middle domain R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 PANTHER PTHR10229 3 429 7.3E-161 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 Gene3D G3DSA:3.40.50.300 200 365 1.9E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 PANTHER PTHR10229:SF0 3 429 7.3E-161 T 22-04-2016 R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 Pfam PF01926 50S ribosome-binding GTPase 202 320 1.5E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS02450 c92bfd8c9c3bace079da1d18f5691e28 437 Hamap MF_00900 GTPase HflX [hflX]. 29 393 45.771 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 R615_RS16330 23a466c75ced94a8837ceaa617de773d 224 Gene3D G3DSA:3.40.50.1360 1 140 6.1E-57 T 22-04-2016 R615_RS16330 23a466c75ced94a8837ceaa617de773d 224 Gene3D G3DSA:3.30.70.260 141 200 2.4E-29 T 22-04-2016 R615_RS16330 23a466c75ced94a8837ceaa617de773d 224 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 217 8.8E-60 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 R615_RS16330 23a466c75ced94a8837ceaa617de773d 224 PANTHER PTHR11934 1 222 6.6E-133 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 R615_RS16330 23a466c75ced94a8837ceaa617de773d 224 SUPERFAMILY SSF75445 131 202 5.23E-24 T 22-04-2016 R615_RS16330 23a466c75ced94a8837ceaa617de773d 224 PANTHER PTHR11934:SF11 1 222 6.6E-133 T 22-04-2016 R615_RS16330 23a466c75ced94a8837ceaa617de773d 224 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 219 5.2E-66 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 R615_RS16330 23a466c75ced94a8837ceaa617de773d 224 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 221 33.317 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 R615_RS16330 23a466c75ced94a8837ceaa617de773d 224 SUPERFAMILY SSF100950 1 150 4.61E-45 T 22-04-2016 R615_RS14550 878b825fbd5c36e3313a0da3330d03ae 485 SUPERFAMILY SSF51905 291 408 4.58E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14550 878b825fbd5c36e3313a0da3330d03ae 485 SUPERFAMILY SSF51905 4 220 4.58E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14550 878b825fbd5c36e3313a0da3330d03ae 485 Gene3D G3DSA:3.50.50.60 1 247 2.0E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14550 878b825fbd5c36e3313a0da3330d03ae 485 Gene3D G3DSA:3.50.50.60 305 482 3.6E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14550 878b825fbd5c36e3313a0da3330d03ae 485 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 166 190 2.3E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS14550 878b825fbd5c36e3313a0da3330d03ae 485 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 2.3E-5 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 R615_RS14550 878b825fbd5c36e3313a0da3330d03ae 485 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 222 9.2E-14 T 22-04-2016 R615_RS14550 878b825fbd5c36e3313a0da3330d03ae 485 PANTHER PTHR23023:SF132 1 481 2.9E-161 T 22-04-2016 R615_RS14550 878b825fbd5c36e3313a0da3330d03ae 485 PANTHER PTHR23023 1 481 2.9E-161 T 22-04-2016 R615_RS14550 878b825fbd5c36e3313a0da3330d03ae 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 9.4E-5 T 22-04-2016 R615_RS14550 878b825fbd5c36e3313a0da3330d03ae 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 9.4E-5 T 22-04-2016 R615_RS01595 5cb38abcdbd05c7dce7be7f494e49f93 214 Gene3D G3DSA:3.40.50.880 6 210 4.0E-73 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS01595 5cb38abcdbd05c7dce7be7f494e49f93 214 SUPERFAMILY SSF52317 4 210 6.45E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS01595 5cb38abcdbd05c7dce7be7f494e49f93 214 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 7 209 2.4E-62 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 R615_RS01595 5cb38abcdbd05c7dce7be7f494e49f93 214 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 210 33.471 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 R615_RS01595 5cb38abcdbd05c7dce7be7f494e49f93 214 PANTHER PTHR21235:SF1 8 210 4.0E-78 T 22-04-2016 R615_RS01595 5cb38abcdbd05c7dce7be7f494e49f93 214 PANTHER PTHR21235 8 210 4.0E-78 T 22-04-2016 R615_RS01595 5cb38abcdbd05c7dce7be7f494e49f93 214 PIRSF PIRSF000495 4 213 2.8E-65 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 R615_RS01595 5cb38abcdbd05c7dce7be7f494e49f93 214 Pfam PF00117 Glutamine amidotransferase class-I 8 207 7.8E-18 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 R615_RS00785 f3517fe04fedb740b7937bd033c8dc47 232 PANTHER PTHR26402 6 227 1.5E-134 T 22-04-2016 R615_RS00785 f3517fe04fedb740b7937bd033c8dc47 232 SMART SM00862 153 227 3.5E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS00785 f3517fe04fedb740b7937bd033c8dc47 232 SUPERFAMILY SSF46894 132 228 4.54E-27 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS00785 f3517fe04fedb740b7937bd033c8dc47 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 227 2.1E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS00785 f3517fe04fedb740b7937bd033c8dc47 232 SMART SM00448 6 119 1.8E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS00785 f3517fe04fedb740b7937bd033c8dc47 232 Pfam PF00072 Response regulator receiver domain 8 119 2.9E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS00785 f3517fe04fedb740b7937bd033c8dc47 232 PANTHER PTHR26402:SF576 6 227 1.5E-134 T 22-04-2016 R615_RS00785 f3517fe04fedb740b7937bd033c8dc47 232 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 6 228 6.8E-109 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 R615_RS00785 f3517fe04fedb740b7937bd033c8dc47 232 Gene3D G3DSA:1.10.10.10 132 230 3.3E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00785 f3517fe04fedb740b7937bd033c8dc47 232 SUPERFAMILY SSF52172 3 128 3.42E-44 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS00785 f3517fe04fedb740b7937bd033c8dc47 232 Gene3D G3DSA:3.40.50.2300 4 129 3.9E-43 T 22-04-2016 R615_RS10465 857ae3c66f0a74b4ee9a74c87736104d 398 Pfam PF01370 NAD dependent epimerase/dehydratase family 19 81 1.0E-4 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 R615_RS10465 857ae3c66f0a74b4ee9a74c87736104d 398 Gene3D G3DSA:3.30.470.20 199 391 2.0E-66 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS10465 857ae3c66f0a74b4ee9a74c87736104d 398 SUPERFAMILY SSF52440 3 112 1.28E-34 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS10465 857ae3c66f0a74b4ee9a74c87736104d 398 Gene3D G3DSA:3.30.1490.20 123 198 1.6E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS10465 857ae3c66f0a74b4ee9a74c87736104d 398 SUPERFAMILY SSF51246 326 396 6.28E-14 T 22-04-2016 IPR011054 Rudiment single hybrid motif R615_RS10465 857ae3c66f0a74b4ee9a74c87736104d 398 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 397 52.073 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 R615_RS10465 857ae3c66f0a74b4ee9a74c87736104d 398 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 396 1.8E-185 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 R615_RS10465 857ae3c66f0a74b4ee9a74c87736104d 398 PANTHER PTHR11609 1 394 3.1E-212 T 22-04-2016 R615_RS10465 857ae3c66f0a74b4ee9a74c87736104d 398 Gene3D G3DSA:3.40.50.20 4 120 6.3E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain R615_RS10465 857ae3c66f0a74b4ee9a74c87736104d 398 SUPERFAMILY SSF56059 113 320 1.22E-55 T 22-04-2016 R615_RS10465 857ae3c66f0a74b4ee9a74c87736104d 398 PANTHER PTHR11609:SF7 1 394 3.1E-212 T 22-04-2016 R615_RS10465 857ae3c66f0a74b4ee9a74c87736104d 398 Pfam PF02222 ATP-grasp domain 123 300 1.2E-53 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 R615_RS06870 57e61d73db649d976a01740da096bddd 256 PANTHER PTHR13754:SF15 1 254 1.3E-56 T 22-04-2016 R615_RS06870 57e61d73db649d976a01740da096bddd 256 Gene3D G3DSA:3.60.15.10 9 224 3.9E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS06870 57e61d73db649d976a01740da096bddd 256 SMART SM00849 11 188 1.0E-4 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS06870 57e61d73db649d976a01740da096bddd 256 Pfam PF12706 Beta-lactamase superfamily domain 24 202 7.5E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS06870 57e61d73db649d976a01740da096bddd 256 PANTHER PTHR13754 1 254 1.3E-56 T 22-04-2016 R615_RS06870 57e61d73db649d976a01740da096bddd 256 SUPERFAMILY SSF56281 6 222 3.14E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS08965 e4ae12437de822f6b79a9864bbbbda58 413 SUPERFAMILY SSF56349 147 398 7.95E-23 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 R615_RS08965 e4ae12437de822f6b79a9864bbbbda58 413 SUPERFAMILY SSF56349 57 103 7.95E-23 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 R615_RS08965 e4ae12437de822f6b79a9864bbbbda58 413 PANTHER PTHR30349 147 402 7.4E-17 T 22-04-2016 R615_RS08965 e4ae12437de822f6b79a9864bbbbda58 413 PANTHER PTHR30349 63 104 7.4E-17 T 22-04-2016 R615_RS08965 e4ae12437de822f6b79a9864bbbbda58 413 Gene3D G3DSA:1.10.443.10 215 399 1.7E-18 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 R615_RS08965 e4ae12437de822f6b79a9864bbbbda58 413 Gene3D G3DSA:1.10.150.130 58 103 9.3E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal R615_RS08965 e4ae12437de822f6b79a9864bbbbda58 413 Gene3D G3DSA:1.10.150.130 146 180 9.3E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal R615_RS11205 17db78f02a83a798e484e64798578235 342 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 3 336 49.804 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS11205 17db78f02a83a798e484e64798578235 342 PANTHER PTHR11938 42 331 4.3E-87 T 22-04-2016 R615_RS11205 17db78f02a83a798e484e64798578235 342 PIRSF PIRSF000164 13 342 9.6E-98 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 R615_RS11205 17db78f02a83a798e484e64798578235 342 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 4 340 2.1E-132 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS11205 17db78f02a83a798e484e64798578235 342 Pfam PF01180 Dihydroorotate dehydrogenase 48 340 5.9E-91 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 R615_RS11205 17db78f02a83a798e484e64798578235 342 SUPERFAMILY SSF51395 4 339 1.01E-103 T 22-04-2016 R615_RS11205 17db78f02a83a798e484e64798578235 342 Gene3D G3DSA:3.20.20.70 4 340 2.8E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS11205 17db78f02a83a798e484e64798578235 342 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 R615_RS11205 17db78f02a83a798e484e64798578235 342 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 81 100 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 R615_RS00990 50559c03bf171d9e5c17ace369e43184 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.2E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS00990 50559c03bf171d9e5c17ace369e43184 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.2E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS00990 50559c03bf171d9e5c17ace369e43184 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 50 4.8E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS00990 50559c03bf171d9e5c17ace369e43184 219 PANTHER PTHR30055:SF30 1 163 1.1E-41 T 22-04-2016 R615_RS00990 50559c03bf171d9e5c17ace369e43184 219 PANTHER PTHR30055 1 163 1.1E-41 T 22-04-2016 R615_RS00990 50559c03bf171d9e5c17ace369e43184 219 SUPERFAMILY SSF46689 3 70 5.64E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS00990 50559c03bf171d9e5c17ace369e43184 219 Pfam PF13972 Bacterial transcriptional repressor 56 199 1.1E-42 T 22-04-2016 IPR025722 Bacterial transcriptional repressor TetR R615_RS00990 50559c03bf171d9e5c17ace369e43184 219 Gene3D G3DSA:1.10.357.10 3 162 2.8E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 Pfam PF00176 SNF2 family N-terminal domain 165 362 1.1E-13 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 PANTHER PTHR10799:SF610 748 867 1.6E-151 T 22-04-2016 R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 PANTHER PTHR10799:SF610 126 345 1.6E-151 T 22-04-2016 R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 PANTHER PTHR10799:SF610 1 8 1.6E-151 T 22-04-2016 R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 PANTHER PTHR10799:SF610 373 641 1.6E-151 T 22-04-2016 R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 Pfam PF00271 Helicase conserved C-terminal domain 441 551 1.0E-13 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 SUPERFAMILY SSF52540 430 578 4.37E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 SUPERFAMILY SSF52540 259 324 4.37E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 Pfam PF12137 RNA polymerase recycling family C-terminal 555 910 1.6E-102 T 22-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 SMART SM00487 142 331 5.2E-16 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 PANTHER PTHR10799 748 867 1.6E-151 T 22-04-2016 R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 PANTHER PTHR10799 126 345 1.6E-151 T 22-04-2016 R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 PANTHER PTHR10799 1 8 1.6E-151 T 22-04-2016 R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 PANTHER PTHR10799 373 641 1.6E-151 T 22-04-2016 R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 Gene3D G3DSA:3.40.50.300 145 305 7.8E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 SMART SM00490 468 551 6.4E-13 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 Gene3D G3DSA:3.40.50.300 435 554 1.4E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08660 f0fcd8cbad6b58d6fcc1a9baf625caf6 912 SUPERFAMILY SSF52540 135 364 1.74E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07825 938fa29a2ee90d2aa1235e9aab24d00a 156 Gene3D G3DSA:1.10.10.10 8 151 1.1E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS07825 938fa29a2ee90d2aa1235e9aab24d00a 156 PANTHER PTHR33164:SF5 8 134 1.1E-42 T 22-04-2016 R615_RS07825 938fa29a2ee90d2aa1235e9aab24d00a 156 Pfam PF01047 MarR family 39 102 5.9E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS07825 938fa29a2ee90d2aa1235e9aab24d00a 156 PANTHER PTHR33164 8 134 1.1E-42 T 22-04-2016 R615_RS07825 938fa29a2ee90d2aa1235e9aab24d00a 156 SUPERFAMILY SSF46785 5 148 1.73E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS07825 938fa29a2ee90d2aa1235e9aab24d00a 156 SMART SM00347 32 137 9.2E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS10345 eea846a657a8a596cee685473fce8665 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 502 701 3.0E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS10345 eea846a657a8a596cee685473fce8665 706 SMART SM00283 444 705 8.4E-66 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS10345 eea846a657a8a596cee685473fce8665 706 Gene3D G3DSA:3.30.450.20 91 128 8.0E-9 T 22-04-2016 R615_RS10345 eea846a657a8a596cee685473fce8665 706 Gene3D G3DSA:3.30.450.20 168 234 8.0E-9 T 22-04-2016 R615_RS10345 eea846a657a8a596cee685473fce8665 706 Pfam PF00672 HAMP domain 356 426 2.1E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS10345 eea846a657a8a596cee685473fce8665 706 PANTHER PTHR32089 176 706 9.3E-136 T 22-04-2016 R615_RS10345 eea846a657a8a596cee685473fce8665 706 Pfam PF02743 Cache domain 48 326 6.4E-19 T 22-04-2016 IPR033479 Double Cache domain 1 R615_RS10345 eea846a657a8a596cee685473fce8665 706 Gene3D G3DSA:1.10.287.950 458 673 5.6E-55 T 22-04-2016 R615_RS10345 eea846a657a8a596cee685473fce8665 706 SUPERFAMILY SSF58104 397 705 4.97E-71 T 22-04-2016 R615_RS10345 eea846a657a8a596cee685473fce8665 706 PANTHER PTHR32089:SF64 176 706 9.3E-136 T 22-04-2016 R615_RS10345 eea846a657a8a596cee685473fce8665 706 SMART SM00304 375 429 4.0E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS01095 fc5ec7f3bc2b827a4f76587e89b423b3 699 SUPERFAMILY SSF56935 45 699 1.18E-92 T 22-04-2016 R615_RS01095 fc5ec7f3bc2b827a4f76587e89b423b3 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 166 7.7E-20 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS01095 fc5ec7f3bc2b827a4f76587e89b423b3 699 Pfam PF00593 TonB dependent receptor 423 680 7.2E-21 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS01095 fc5ec7f3bc2b827a4f76587e89b423b3 699 Gene3D G3DSA:2.170.130.10 56 168 2.9E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS01095 fc5ec7f3bc2b827a4f76587e89b423b3 699 Gene3D G3DSA:2.40.170.20 169 699 3.5E-56 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS01095 fc5ec7f3bc2b827a4f76587e89b423b3 699 PANTHER PTHR32552 1 454 2.3E-32 T 22-04-2016 R615_RS01095 fc5ec7f3bc2b827a4f76587e89b423b3 699 PANTHER PTHR32552 472 699 2.3E-32 T 22-04-2016 R615_RS05225 ed9ad7710f01c7c564af5fb9b5cf73a8 492 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 490 3.2E-211 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 R615_RS05225 ed9ad7710f01c7c564af5fb9b5cf73a8 492 Hamap MF_00186 Glycerol kinase [glpK]. 2 492 53.87 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 R615_RS05225 ed9ad7710f01c7c564af5fb9b5cf73a8 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 248 5.7E-77 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 R615_RS05225 ed9ad7710f01c7c564af5fb9b5cf73a8 492 PIRSF PIRSF000538 2 492 3.8E-168 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 R615_RS05225 ed9ad7710f01c7c564af5fb9b5cf73a8 492 PANTHER PTHR10196 1 488 1.4E-275 T 22-04-2016 R615_RS05225 ed9ad7710f01c7c564af5fb9b5cf73a8 492 Gene3D G3DSA:3.30.420.40 250 489 3.1E-90 T 22-04-2016 R615_RS05225 ed9ad7710f01c7c564af5fb9b5cf73a8 492 PANTHER PTHR10196:SF44 1 488 1.4E-275 T 22-04-2016 R615_RS05225 ed9ad7710f01c7c564af5fb9b5cf73a8 492 SUPERFAMILY SSF53067 251 489 5.74E-76 T 22-04-2016 R615_RS05225 ed9ad7710f01c7c564af5fb9b5cf73a8 492 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 132 144 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 R615_RS05225 ed9ad7710f01c7c564af5fb9b5cf73a8 492 Gene3D G3DSA:3.30.420.40 3 249 2.5E-101 T 22-04-2016 R615_RS05225 ed9ad7710f01c7c564af5fb9b5cf73a8 492 SUPERFAMILY SSF53067 4 251 1.5E-92 T 22-04-2016 R615_RS05225 ed9ad7710f01c7c564af5fb9b5cf73a8 492 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 445 5.5E-55 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 Pfam PF11808 Domain of unknown function (DUF3329) 4 88 8.9E-22 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 PANTHER PTHR24423:SF554 25 426 1.2E-126 T 22-04-2016 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 Gene3D G3DSA:1.10.287.130 195 255 2.3E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 425 4.6E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 Gene3D G3DSA:3.30.450.20 102 194 1.1E-9 T 22-04-2016 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 SUPERFAMILY SSF55874 260 426 7.99E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 SMART SM00387 314 426 4.2E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 PANTHER PTHR24423 25 426 1.2E-126 T 22-04-2016 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 SUPERFAMILY SSF47384 190 269 2.75E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 SMART SM00388 203 270 1.7E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 SMART SM00091 96 162 0.0012 T 22-04-2016 IPR000014 PAS domain R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 1.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 1.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 379 1.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 365 1.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 Gene3D G3DSA:3.30.565.10 256 425 1.6E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 Pfam PF00989 PAS fold 97 151 1.9E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 269 2.7E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 SUPERFAMILY SSF55785 107 202 9.77E-7 T 22-04-2016 IPR000014 PAS domain R615_RS00780 5c9b9fc7b0d4d3ea0193ce31a43eb8d6 443 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 421 1.9E-127 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 167 1.0E-54 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 TIGRFAM TIGR00593 pola: DNA polymerase I 7 930 1.4E-293 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 Gene3D G3DSA:3.30.420.10 329 544 7.7E-85 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 SUPERFAMILY SSF88723 4 167 1.37E-54 T 22-04-2016 IPR029060 PIN domain-like R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 Gene3D G3DSA:3.30.70.370 821 930 3.3E-70 T 22-04-2016 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 Gene3D G3DSA:3.30.70.370 666 713 3.3E-70 T 22-04-2016 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 Pfam PF01612 3'-5' exonuclease 332 519 1.3E-38 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PANTHER PTHR10133:SF27 318 929 0.0 T 22-04-2016 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PANTHER PTHR10133:SF27 1 285 0.0 T 22-04-2016 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 SUPERFAMILY SSF53098 335 520 5.91E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 266 1.6E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 SUPERFAMILY SSF56672 524 930 5.89E-159 T 22-04-2016 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 Gene3D G3DSA:1.10.150.20 183 250 5.4E-27 T 22-04-2016 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 Gene3D G3DSA:1.10.150.20 714 820 2.8E-36 T 22-04-2016 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 SMART SM00475 4 265 6.8E-126 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 863 1.2E-81 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 725 1.2E-81 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 781 1.2E-81 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 1.2E-81 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 1.2E-81 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 745 1.2E-81 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 695 1.2E-81 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 679 1.2E-81 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 877 890 1.2E-81 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PANTHER PTHR10133 318 929 0.0 T 22-04-2016 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 PANTHER PTHR10133 1 285 0.0 T 22-04-2016 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 Gene3D G3DSA:3.40.50.1010 5 182 5.6E-71 T 22-04-2016 IPR029060 PIN domain-like R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 SUPERFAMILY SSF47807 168 288 4.78E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 Pfam PF00476 DNA polymerase family A 552 927 1.0E-157 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 ProSitePatterns PS00447 DNA polymerase family A signature. 756 775 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 SMART SM00482 688 894 3.6E-119 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 SMART SM00279 170 205 7.1E-13 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 SMART SM00474 332 519 1.1E-41 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 R615_RS00395 e064c371eea6016c575ce68a89d0ea82 930 Gene3D G3DSA:1.20.1060.10 546 665 4.6E-37 T 22-04-2016 R615_RS08460 c2852d8df9c9290896ffca7f9984aad7 164 Gene3D G3DSA:3.40.630.30 45 128 1.1E-4 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS08460 c2852d8df9c9290896ffca7f9984aad7 164 PANTHER PTHR21367 1 160 1.0E-34 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase R615_RS08460 c2852d8df9c9290896ffca7f9984aad7 164 SUPERFAMILY SSF55729 13 161 2.76E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS08460 c2852d8df9c9290896ffca7f9984aad7 164 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 34 154 9.3E-34 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 R615_RS08460 c2852d8df9c9290896ffca7f9984aad7 164 PANTHER PTHR21367:SF0 1 160 1.0E-34 T 22-04-2016 R615_RS06145 8058c48e5ff5117d619d155dd261e913 318 PANTHER PTHR22604 1 197 2.6E-25 T 22-04-2016 R615_RS06145 8058c48e5ff5117d619d155dd261e913 318 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 151 208 1.5E-11 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 R615_RS06145 8058c48e5ff5117d619d155dd261e913 318 SUPERFAMILY SSF51735 3 159 4.07E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06145 8058c48e5ff5117d619d155dd261e913 318 Gene3D G3DSA:3.40.50.720 2 198 3.2E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06145 8058c48e5ff5117d619d155dd261e913 318 SUPERFAMILY SSF55347 133 254 2.62E-9 T 22-04-2016 R615_RS06145 8058c48e5ff5117d619d155dd261e913 318 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 124 1.2E-19 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 R615_RS07120 f60b9ada7492907925351505078a7c9e 265 PANTHER PTHR37838:SF1 1 264 8.9E-85 T 22-04-2016 R615_RS07120 f60b9ada7492907925351505078a7c9e 265 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 259 1.5E-77 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 R615_RS07120 f60b9ada7492907925351505078a7c9e 265 PANTHER PTHR37838 1 264 8.9E-85 T 22-04-2016 R615_RS07120 f60b9ada7492907925351505078a7c9e 265 SMART SM00900 153 251 9.7E-33 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 R615_RS07120 f60b9ada7492907925351505078a7c9e 265 PIRSF PIRSF009437 1 265 5.7E-91 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 R615_RS07120 f60b9ada7492907925351505078a7c9e 265 Pfam PF04205 FMN-binding domain 153 248 8.6E-17 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 R615_RS07120 f60b9ada7492907925351505078a7c9e 265 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 264 35.318 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 R615_RS08795 77bdd7266194590a121713ebb7c19265 433 SUPERFAMILY SSF56059 111 168 2.12E-6 T 22-04-2016 R615_RS08795 77bdd7266194590a121713ebb7c19265 433 SUPERFAMILY SSF56059 282 401 2.12E-6 T 22-04-2016 R615_RS06045 bcb2e23da2c30db9003c12962699b7e4 283 Pfam PF01479 S4 domain 3 48 9.2E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS06045 bcb2e23da2c30db9003c12962699b7e4 283 SUPERFAMILY SSF55120 64 234 7.02E-43 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS06045 bcb2e23da2c30db9003c12962699b7e4 283 Pfam PF00849 RNA pseudouridylate synthase 66 196 2.5E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS06045 bcb2e23da2c30db9003c12962699b7e4 283 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 229 5.1E-54 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 R615_RS06045 bcb2e23da2c30db9003c12962699b7e4 283 SUPERFAMILY SSF55174 3 94 2.02E-13 T 22-04-2016 R615_RS06045 bcb2e23da2c30db9003c12962699b7e4 283 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 R615_RS06045 bcb2e23da2c30db9003c12962699b7e4 283 PANTHER PTHR21600 1 271 1.6E-87 T 22-04-2016 R615_RS06045 bcb2e23da2c30db9003c12962699b7e4 283 SMART SM00363 3 71 7.9E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS06045 bcb2e23da2c30db9003c12962699b7e4 283 PANTHER PTHR21600:SF2 1 271 1.6E-87 T 22-04-2016 R615_RS06045 bcb2e23da2c30db9003c12962699b7e4 283 Gene3D G3DSA:3.10.290.10 3 59 1.9E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 Gene3D G3DSA:3.40.50.300 410 588 7.6E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 Pfam PF00271 Helicase conserved C-terminal domain 450 554 1.2E-16 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 Gene3D G3DSA:3.40.50.300 36 208 2.0E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 SMART SM00487 33 228 1.8E-25 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 PANTHER PTHR10799 49 319 1.0E-63 T 22-04-2016 R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 PANTHER PTHR10799 846 975 1.0E-63 T 22-04-2016 R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 PANTHER PTHR10799 481 682 1.0E-63 T 22-04-2016 R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 PANTHER PTHR10799 377 452 1.0E-63 T 22-04-2016 R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 SUPERFAMILY SSF52540 24 244 1.65E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 Pfam PF00176 SNF2 family N-terminal domain 53 302 2.6E-33 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 SMART SM00490 475 554 2.1E-17 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 SUPERFAMILY SSF52540 401 453 7.32E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 SUPERFAMILY SSF52540 482 599 7.32E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 SUPERFAMILY SSF52540 156 214 7.32E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 PANTHER PTHR10799:SF576 49 319 1.0E-63 T 22-04-2016 R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 PANTHER PTHR10799:SF576 846 975 1.0E-63 T 22-04-2016 R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 PANTHER PTHR10799:SF576 481 682 1.0E-63 T 22-04-2016 R615_RS03785 da117a5ab489647908899d7d4a759a0b 993 PANTHER PTHR10799:SF576 377 452 1.0E-63 T 22-04-2016 R615_RS07475 346c47c85d51556bf172282cb8fb870e 220 PANTHER PTHR19308 11 200 4.5E-21 T 22-04-2016 R615_RS07475 346c47c85d51556bf172282cb8fb870e 220 SUPERFAMILY SSF55961 18 202 5.5E-36 T 22-04-2016 R615_RS07475 346c47c85d51556bf172282cb8fb870e 220 PIRSF PIRSF039033 3 220 1.1E-59 T 22-04-2016 IPR028347 START domain-containing protein R615_RS07475 346c47c85d51556bf172282cb8fb870e 220 PANTHER PTHR19308:SF1 11 200 4.5E-21 T 22-04-2016 R615_RS07475 346c47c85d51556bf172282cb8fb870e 220 Pfam PF01852 START domain 24 202 2.9E-14 T 22-04-2016 IPR002913 START domain GO:0008289 R615_RS07475 346c47c85d51556bf172282cb8fb870e 220 Gene3D G3DSA:3.30.530.20 23 202 2.4E-32 T 22-04-2016 IPR023393 START-like domain R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 479 486 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 498 1.6E-155 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 Pfam PF04963 Sigma-54 factor, core binding domain 134 327 8.0E-60 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 Pfam PF04552 Sigma-54, DNA binding domain 341 499 1.2E-70 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 5.2E-17 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 PANTHER PTHR32248 1 66 2.1E-167 T 22-04-2016 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 PANTHER PTHR32248 82 501 2.1E-167 T 22-04-2016 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 PRINTS PR00045 Sigma-54 factor signature 474 492 8.3E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 PRINTS PR00045 Sigma-54 factor signature 400 412 8.3E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 PRINTS PR00045 Sigma-54 factor signature 210 227 8.3E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 PRINTS PR00045 Sigma-54 factor signature 416 427 8.3E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 PIRSF PIRSF000774 1 501 4.8E-155 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 PANTHER PTHR32248:SF4 1 66 2.1E-167 T 22-04-2016 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 PANTHER PTHR32248:SF4 82 501 2.1E-167 T 22-04-2016 R615_RS02080 02a6eb8f1f719a2f189c6a2c832581a5 501 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 388 407 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 R615_RS16820 fe6d41277db3f7a3a688a64d9610cb3a 350 SUPERFAMILY SSF63380 106 207 2.2E-13 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 R615_RS16820 fe6d41277db3f7a3a688a64d9610cb3a 350 PANTHER PTHR19370:SF68 38 344 3.0E-46 T 22-04-2016 R615_RS16820 fe6d41277db3f7a3a688a64d9610cb3a 350 SUPERFAMILY SSF52343 216 345 5.24E-31 T 22-04-2016 R615_RS16820 fe6d41277db3f7a3a688a64d9610cb3a 350 Gene3D G3DSA:2.40.30.10 105 207 1.3E-15 T 22-04-2016 R615_RS16820 fe6d41277db3f7a3a688a64d9610cb3a 350 Gene3D G3DSA:3.10.20.30 8 94 1.1E-20 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS16820 fe6d41277db3f7a3a688a64d9610cb3a 350 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 85 4.5E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS16820 fe6d41277db3f7a3a688a64d9610cb3a 350 SUPERFAMILY SSF54292 6 92 9.7E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS16820 fe6d41277db3f7a3a688a64d9610cb3a 350 Pfam PF00175 Oxidoreductase NAD-binding domain 223 323 3.3E-13 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 R615_RS16820 fe6d41277db3f7a3a688a64d9610cb3a 350 Gene3D G3DSA:3.40.50.80 215 345 7.8E-31 T 22-04-2016 R615_RS16820 fe6d41277db3f7a3a688a64d9610cb3a 350 PANTHER PTHR19370 38 344 3.0E-46 T 22-04-2016 R615_RS05175 ad7749cf9aa2fa5eb9caec0acaa499bd 157 PANTHER PTHR28026:SF3 1 152 6.8E-45 T 22-04-2016 R615_RS05175 ad7749cf9aa2fa5eb9caec0acaa499bd 157 Pfam PF06127 Protein of unknown function (DUF962) 3 151 3.2E-25 T 22-04-2016 IPR009305 Protein of unknown function DUF962 R615_RS05175 ad7749cf9aa2fa5eb9caec0acaa499bd 157 PANTHER PTHR28026 1 152 6.8E-45 T 22-04-2016 R615_RS14245 4a5761e33769fe27c259a27554e9071a 328 Pfam PF03060 Nitronate monooxygenase 93 313 1.7E-21 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 R615_RS14245 4a5761e33769fe27c259a27554e9071a 328 PANTHER PTHR32332 2 321 8.2E-151 T 22-04-2016 R615_RS14245 4a5761e33769fe27c259a27554e9071a 328 SUPERFAMILY SSF51412 9 306 1.01E-52 T 22-04-2016 R615_RS14245 4a5761e33769fe27c259a27554e9071a 328 Gene3D G3DSA:3.20.20.70 9 309 9.4E-47 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS14245 4a5761e33769fe27c259a27554e9071a 328 PANTHER PTHR32332:SF21 2 321 8.2E-151 T 22-04-2016 R615_RS12725 636fd859190dc7896c3ef88a45faa8cc 331 SUPERFAMILY SSF53800 3 329 2.78E-103 T 22-04-2016 R615_RS12725 636fd859190dc7896c3ef88a45faa8cc 331 ProSitePatterns PS00534 Ferrochelatase signature. 194 212 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 R615_RS12725 636fd859190dc7896c3ef88a45faa8cc 331 Pfam PF00762 Ferrochelatase 7 324 4.8E-108 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 R615_RS12725 636fd859190dc7896c3ef88a45faa8cc 331 TIGRFAM TIGR00109 hemH: ferrochelatase 2 324 1.6E-95 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 R615_RS12725 636fd859190dc7896c3ef88a45faa8cc 331 Gene3D G3DSA:3.40.50.1400 5 205 1.3E-64 T 22-04-2016 R615_RS12725 636fd859190dc7896c3ef88a45faa8cc 331 PANTHER PTHR11108 1 324 9.1E-119 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 R615_RS12725 636fd859190dc7896c3ef88a45faa8cc 331 Gene3D G3DSA:3.40.50.1400 206 325 7.7E-36 T 22-04-2016 R615_RS12725 636fd859190dc7896c3ef88a45faa8cc 331 Hamap MF_00323 Ferrochelatase [hemH]. 4 325 36.683 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 R615_RS10265 0240beeae65dfc986176a688dd6b56b9 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 25.911 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 R615_RS10265 0240beeae65dfc986176a688dd6b56b9 193 PIRSF PIRSF006102 1 193 1.1E-60 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 R615_RS10265 0240beeae65dfc986176a688dd6b56b9 193 PANTHER PTHR30335:SF0 2 193 3.6E-122 T 22-04-2016 R615_RS10265 0240beeae65dfc986176a688dd6b56b9 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 4.4E-87 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 R615_RS10265 0240beeae65dfc986176a688dd6b56b9 193 PANTHER PTHR30335 2 193 3.6E-122 T 22-04-2016 R615_RS10265 0240beeae65dfc986176a688dd6b56b9 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.9E-59 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 R615_RS12055 82aab89ddb88e2e42b312a95bf8b8fb3 286 Pfam PF14743 DNA ligase OB-like domain 218 283 3.3E-23 T 22-04-2016 IPR029319 DNA ligase, OB-like domain R615_RS12055 82aab89ddb88e2e42b312a95bf8b8fb3 286 SUPERFAMILY SSF50249 178 283 1.31E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12055 82aab89ddb88e2e42b312a95bf8b8fb3 286 Gene3D G3DSA:3.30.1490.70 35 56 6.2E-10 T 22-04-2016 R615_RS12055 82aab89ddb88e2e42b312a95bf8b8fb3 286 Gene3D G3DSA:3.30.1490.70 157 189 6.2E-10 T 22-04-2016 R615_RS12055 82aab89ddb88e2e42b312a95bf8b8fb3 286 SUPERFAMILY SSF56091 32 204 2.82E-32 T 22-04-2016 R615_RS12055 82aab89ddb88e2e42b312a95bf8b8fb3 286 PANTHER PTHR10459 1 285 2.3E-43 T 22-04-2016 R615_RS12055 82aab89ddb88e2e42b312a95bf8b8fb3 286 Gene3D G3DSA:2.40.50.140 190 285 2.3E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12055 82aab89ddb88e2e42b312a95bf8b8fb3 286 PANTHER PTHR10459:SF68 1 285 2.3E-43 T 22-04-2016 R615_RS15785 a685408d7f0af054fd725d7ff13e957e 61 SUPERFAMILY SSF55129 4 59 1.83E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain R615_RS15785 a685408d7f0af054fd725d7ff13e957e 61 PANTHER PTHR15892 4 59 1.2E-25 T 22-04-2016 R615_RS15785 a685408d7f0af054fd725d7ff13e957e 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 59 3.6E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 R615_RS15785 a685408d7f0af054fd725d7ff13e957e 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 60 21.662 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 R615_RS15785 a685408d7f0af054fd725d7ff13e957e 61 Pfam PF00327 Ribosomal protein L30p/L7e 6 56 2.9E-20 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain R615_RS15785 a685408d7f0af054fd725d7ff13e957e 61 ProSitePatterns PS00634 Ribosomal protein L30 signature. 24 56 - T 22-04-2016 IPR018038 Ribosomal protein L30, conserved site R615_RS15785 a685408d7f0af054fd725d7ff13e957e 61 PIRSF PIRSF002211 1 61 1.3E-27 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 R615_RS15785 a685408d7f0af054fd725d7ff13e957e 61 Gene3D G3DSA:3.30.1390.20 4 59 1.9E-29 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain R615_RS16640 19c39ba82b205c828bd0f6834ff5938f 420 SMART SM01274 18 151 1.3E-76 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 R615_RS16640 19c39ba82b205c828bd0f6834ff5938f 420 PANTHER PTHR23406 21 404 1.6E-159 T 22-04-2016 R615_RS16640 19c39ba82b205c828bd0f6834ff5938f 420 Gene3D G3DSA:3.40.50.10380 8 160 6.7E-50 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 R615_RS16640 19c39ba82b205c828bd0f6834ff5938f 420 Pfam PF03949 Malic enzyme, NAD binding domain 165 357 1.2E-22 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 R615_RS16640 19c39ba82b205c828bd0f6834ff5938f 420 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 R615_RS16640 19c39ba82b205c828bd0f6834ff5938f 420 PIRSF PIRSF000106 39 416 1.0E-70 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 R615_RS16640 19c39ba82b205c828bd0f6834ff5938f 420 SUPERFAMILY SSF53223 10 161 1.87E-51 T 22-04-2016 R615_RS16640 19c39ba82b205c828bd0f6834ff5938f 420 Gene3D G3DSA:3.40.50.720 161 410 2.4E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS16640 19c39ba82b205c828bd0f6834ff5938f 420 SMART SM00919 163 399 2.4E-135 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 R615_RS16640 19c39ba82b205c828bd0f6834ff5938f 420 PANTHER PTHR23406:SF23 21 404 1.6E-159 T 22-04-2016 R615_RS16640 19c39ba82b205c828bd0f6834ff5938f 420 SUPERFAMILY SSF51735 163 410 4.69E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS16640 19c39ba82b205c828bd0f6834ff5938f 420 Pfam PF00390 Malic enzyme, N-terminal domain 25 150 1.3E-25 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 SMART SM00304 200 252 1.7E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 PANTHER PTHR24423:SF382 630 833 9.3E-139 T 22-04-2016 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 PANTHER PTHR24423:SF382 271 523 9.3E-139 T 22-04-2016 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 SUPERFAMILY SSF55874 346 516 3.14E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 Pfam PF00672 HAMP domain 182 249 3.2E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 517 5.2E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 SUPERFAMILY SSF52172 534 649 1.41E-9 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 SUPERFAMILY SSF52172 673 806 1.57E-36 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 SUPERFAMILY SSF47384 279 358 3.92E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 Gene3D G3DSA:3.30.565.10 343 519 8.3E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 Gene3D G3DSA:1.20.120.160 832 924 1.0E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 Gene3D G3DSA:1.10.287.130 286 342 1.1E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 1.38E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 1.38E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 1.38E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 1.38E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 SMART SM00387 404 520 9.2E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 PANTHER PTHR24423 630 833 9.3E-139 T 22-04-2016 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 PANTHER PTHR24423 271 523 9.3E-139 T 22-04-2016 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 SMART SM00388 292 357 1.2E-26 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 Gene3D G3DSA:3.40.50.2300 673 792 5.6E-38 T 22-04-2016 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 Gene3D G3DSA:3.40.50.2300 534 654 1.2E-9 T 22-04-2016 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 357 1.1E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 Pfam PF01627 Hpt domain 841 923 4.2E-6 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 Pfam PF00072 Response regulator receiver domain 675 786 6.6E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 SUPERFAMILY SSF158472 202 249 1.57E-5 T 22-04-2016 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 SUPERFAMILY SSF47226 769 782 3.14E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 SUPERFAMILY SSF47226 820 920 3.14E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 SMART SM00448 673 786 6.3E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 SMART SM00448 534 646 0.031 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS12490 f67e3dd0c5b47a9b0cc5dcb493ddfdd9 943 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 33 177 5.9E-19 T 22-04-2016 IPR019247 Histidine kinase BarA, N-terminal R615_RS15475 866abe63129a15ad9e2e3d6cbb8a8faa 251 SUPERFAMILY SSF55729 2 125 2.04E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS15475 866abe63129a15ad9e2e3d6cbb8a8faa 251 Gene3D G3DSA:3.40.630.30 2 129 6.0E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS13845 1c6566f5824588fe00a82ec3ca5115ea 263 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 4 262 5.3E-144 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 R615_RS13845 1c6566f5824588fe00a82ec3ca5115ea 263 SUPERFAMILY SSF56276 113 175 4.71E-25 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 R615_RS13845 1c6566f5824588fe00a82ec3ca5115ea 263 SUPERFAMILY SSF56276 42 85 4.71E-25 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 R615_RS13845 1c6566f5824588fe00a82ec3ca5115ea 263 Gene3D G3DSA:3.60.90.10 36 187 6.7E-47 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 R615_RS13845 1c6566f5824588fe00a82ec3ca5115ea 263 PANTHER PTHR33866 113 263 5.2E-146 T 22-04-2016 R615_RS13845 1c6566f5824588fe00a82ec3ca5115ea 263 PANTHER PTHR33866 16 85 5.2E-146 T 22-04-2016 R615_RS13845 1c6566f5824588fe00a82ec3ca5115ea 263 Pfam PF02675 S-adenosylmethionine decarboxylase 39 170 3.8E-32 T 22-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 R615_RS13845 1c6566f5824588fe00a82ec3ca5115ea 263 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 263 164.151 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 R615_RS13845 1c6566f5824588fe00a82ec3ca5115ea 263 PANTHER PTHR33866:SF1 113 263 5.2E-146 T 22-04-2016 R615_RS13845 1c6566f5824588fe00a82ec3ca5115ea 263 PANTHER PTHR33866:SF1 16 85 5.2E-146 T 22-04-2016 R615_RS13845 1c6566f5824588fe00a82ec3ca5115ea 263 PIRSF PIRSF001356 1 263 1.5E-140 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 R615_RS17480 1f74e1561bbe3fa9e9842fd2fd2eaae9 550 Gene3D G3DSA:1.10.287.950 301 518 9.3E-59 T 22-04-2016 R615_RS17480 1f74e1561bbe3fa9e9842fd2fd2eaae9 550 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 546 1.7E-53 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS17480 1f74e1561bbe3fa9e9842fd2fd2eaae9 550 SMART SM00304 219 271 0.005 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS17480 1f74e1561bbe3fa9e9842fd2fd2eaae9 550 Pfam PF00672 HAMP domain 200 267 5.2E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS17480 1f74e1561bbe3fa9e9842fd2fd2eaae9 550 SUPERFAMILY SSF58104 239 548 4.32E-75 T 22-04-2016 R615_RS17480 1f74e1561bbe3fa9e9842fd2fd2eaae9 550 SMART SM00283 286 547 3.1E-76 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS17480 1f74e1561bbe3fa9e9842fd2fd2eaae9 550 PANTHER PTHR32089 201 550 1.1E-114 T 22-04-2016 R615_RS17480 1f74e1561bbe3fa9e9842fd2fd2eaae9 550 PANTHER PTHR32089:SF34 201 550 1.1E-114 T 22-04-2016 R615_RS17480 1f74e1561bbe3fa9e9842fd2fd2eaae9 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 307 336 4.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS17480 1f74e1561bbe3fa9e9842fd2fd2eaae9 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 411 4.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS17480 1f74e1561bbe3fa9e9842fd2fd2eaae9 550 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 413 442 4.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS01605 b7a7def9b71579ab943127b9cd654a80 254 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 252 47.907 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 R615_RS01605 b7a7def9b71579ab943127b9cd654a80 254 Pfam PF00977 Histidine biosynthesis protein 6 236 3.5E-90 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 R615_RS01605 b7a7def9b71579ab943127b9cd654a80 254 PANTHER PTHR21235 3 254 2.1E-125 T 22-04-2016 R615_RS01605 b7a7def9b71579ab943127b9cd654a80 254 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 252 2.2E-112 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 R615_RS01605 b7a7def9b71579ab943127b9cd654a80 254 Gene3D G3DSA:3.20.20.70 5 253 6.4E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS01605 b7a7def9b71579ab943127b9cd654a80 254 SUPERFAMILY SSF51366 3 252 2.98E-83 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 R615_RS01605 b7a7def9b71579ab943127b9cd654a80 254 PANTHER PTHR21235:SF2 3 254 2.1E-125 T 22-04-2016 R615_RS05545 1ec7377991a7079586875446dd1a1068 329 Pfam PF01479 S4 domain 8 52 3.4E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS05545 1ec7377991a7079586875446dd1a1068 329 Pfam PF00849 RNA pseudouridylate synthase 69 194 2.8E-12 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS05545 1ec7377991a7079586875446dd1a1068 329 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 7.5E-49 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 R615_RS05545 1ec7377991a7079586875446dd1a1068 329 SMART SM00363 7 68 9.4E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS05545 1ec7377991a7079586875446dd1a1068 329 SUPERFAMILY SSF55120 68 230 8.39E-36 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS05545 1ec7377991a7079586875446dd1a1068 329 PANTHER PTHR21600:SF24 1 248 3.1E-134 T 22-04-2016 R615_RS05545 1ec7377991a7079586875446dd1a1068 329 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 R615_RS05545 1ec7377991a7079586875446dd1a1068 329 Gene3D G3DSA:3.10.290.10 6 60 1.9E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS05545 1ec7377991a7079586875446dd1a1068 329 PANTHER PTHR21600 1 248 3.1E-134 T 22-04-2016 R615_RS05545 1ec7377991a7079586875446dd1a1068 329 SUPERFAMILY SSF55174 7 62 1.62E-12 T 22-04-2016 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 PANTHER PTHR16128 1 319 1.4E-68 T 22-04-2016 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 Pfam PF01593 Flavin containing amine oxidoreductase 125 318 5.1E-6 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 Pfam PF13450 NAD(P)-binding Rossmann-like domain 6 60 7.7E-13 T 22-04-2016 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 Gene3D G3DSA:3.50.50.60 110 185 9.0E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 Gene3D G3DSA:3.50.50.60 2 40 9.0E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 Gene3D G3DSA:3.50.50.60 285 319 9.0E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 PRINTS PR00419 Adrenodoxin reductase family signature 26 39 8.3E-6 T 22-04-2016 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 PRINTS PR00419 Adrenodoxin reductase family signature 3 25 8.3E-6 T 22-04-2016 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 Gene3D G3DSA:3.90.660.10 186 283 2.0E-50 T 22-04-2016 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 Gene3D G3DSA:3.90.660.10 44 109 2.0E-50 T 22-04-2016 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 SUPERFAMILY SSF51905 288 319 2.72E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 SUPERFAMILY SSF51905 1 195 2.72E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS03585 7baa619779bf90fdc08d65b0e905cfff 321 PANTHER PTHR16128:SF5 1 319 1.4E-68 T 22-04-2016 R615_RS15195 a599bc5ef0f2a7efcc1c450fab4f73d0 370 SUPERFAMILY SSF53590 25 303 7.19E-57 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain R615_RS15195 a599bc5ef0f2a7efcc1c450fab4f73d0 370 Gene3D G3DSA:3.90.245.10 20 364 2.6E-63 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain R615_RS15195 a599bc5ef0f2a7efcc1c450fab4f73d0 370 PANTHER PTHR12304 28 290 8.2E-46 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase R615_RS15195 a599bc5ef0f2a7efcc1c450fab4f73d0 370 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 27 305 3.1E-46 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain R615_RS13400 cbb33a0b107ba1985b0935c0e123ac98 160 Gene3D G3DSA:3.40.50.960 7 154 6.1E-43 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS13400 cbb33a0b107ba1985b0935c0e123ac98 160 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 147 1.7E-35 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS13400 cbb33a0b107ba1985b0935c0e123ac98 160 SUPERFAMILY SSF52121 8 156 3.53E-42 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS13400 cbb33a0b107ba1985b0935c0e123ac98 160 PANTHER PTHR21058 7 121 7.1E-32 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS13400 cbb33a0b107ba1985b0935c0e123ac98 160 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 157 20.838 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS02760 546f87c6a98411717813bfcb0a5f28ab 294 PANTHER PTHR35894:SF1 11 276 1.7E-82 T 22-04-2016 R615_RS02760 546f87c6a98411717813bfcb0a5f28ab 294 Pfam PF13401 AAA domain 50 179 4.4E-24 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS02760 546f87c6a98411717813bfcb0a5f28ab 294 Gene3D G3DSA:3.40.50.300 38 189 5.8E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02760 546f87c6a98411717813bfcb0a5f28ab 294 PANTHER PTHR35894 11 276 1.7E-82 T 22-04-2016 R615_RS02760 546f87c6a98411717813bfcb0a5f28ab 294 SUPERFAMILY SSF52540 13 273 4.9E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02760 546f87c6a98411717813bfcb0a5f28ab 294 SMART SM00382 50 194 0.0069 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS16075 26ab7b2336bfa92f68952b58af6343cf 671 PANTHER PTHR37417:SF1 57 629 7.5E-194 T 22-04-2016 R615_RS16075 26ab7b2336bfa92f68952b58af6343cf 671 PANTHER PTHR37417 57 629 7.5E-194 T 22-04-2016 R615_RS16075 26ab7b2336bfa92f68952b58af6343cf 671 Gene3D G3DSA:3.40.50.720 65 141 4.2E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS16075 26ab7b2336bfa92f68952b58af6343cf 671 Gene3D G3DSA:3.40.50.720 254 353 4.2E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS16075 26ab7b2336bfa92f68952b58af6343cf 671 Pfam PF06100 MCRA family 61 568 1.3E-193 T 22-04-2016 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 UniPathway: UPA00199 R615_RS16075 26ab7b2336bfa92f68952b58af6343cf 671 SUPERFAMILY SSF51905 62 307 2.07E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09415 b4ebf0bb14d6244260b9865cb5652b86 89 Pfam PF01402 Ribbon-helix-helix protein, copG family 51 87 9.3E-7 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 R615_RS15145 436f7fbc8206a8ddc9a229c461fb370b 169 PIRSF PIRSF017306 2 160 7.6E-34 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 R615_RS15145 436f7fbc8206a8ddc9a229c461fb370b 169 Pfam PF04115 Ureidoglycolate lyase 6 159 5.6E-42 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 R615_RS15145 436f7fbc8206a8ddc9a229c461fb370b 169 PANTHER PTHR21221 1 156 7.7E-38 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 R615_RS15145 436f7fbc8206a8ddc9a229c461fb370b 169 PANTHER PTHR21221:SF2 1 156 7.7E-38 T 22-04-2016 R615_RS15145 436f7fbc8206a8ddc9a229c461fb370b 169 SUPERFAMILY SSF51182 6 158 1.91E-48 T 22-04-2016 IPR011051 RmlC-like cupin domain R615_RS15145 436f7fbc8206a8ddc9a229c461fb370b 169 Gene3D G3DSA:2.60.120.480 5 162 1.0E-49 T 22-04-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 R615_RS11885 27c39298c988a40072dd7ada1c9f7b3b 254 PANTHER PTHR40572 36 250 5.9E-62 T 22-04-2016 R615_RS11885 27c39298c988a40072dd7ada1c9f7b3b 254 SMART SM00047 97 248 0.0023 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 R615_RS11885 27c39298c988a40072dd7ada1c9f7b3b 254 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 115 243 4.8E-17 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 R615_RS13820 d537f625956b330661d3c7dcea9ae3d4 175 PANTHER PTHR10286 6 174 1.2E-70 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 R615_RS13820 d537f625956b330661d3c7dcea9ae3d4 175 SUPERFAMILY SSF50324 3 174 7.2E-67 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 R615_RS13820 d537f625956b330661d3c7dcea9ae3d4 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.385 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 R615_RS13820 d537f625956b330661d3c7dcea9ae3d4 175 Pfam PF00719 Inorganic pyrophosphatase 18 174 2.5E-53 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 R615_RS13820 d537f625956b330661d3c7dcea9ae3d4 175 Gene3D G3DSA:3.90.80.10 3 174 6.5E-61 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 R615_RS00470 6ec2bc72de5b704bb18ea1280d4f5ffa 600 Gene3D G3DSA:1.25.40.10 129 130 1.3E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS00470 6ec2bc72de5b704bb18ea1280d4f5ffa 600 Gene3D G3DSA:1.25.40.10 33 87 1.3E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS00470 6ec2bc72de5b704bb18ea1280d4f5ffa 600 Gene3D G3DSA:1.25.40.10 204 235 1.3E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS00470 6ec2bc72de5b704bb18ea1280d4f5ffa 600 SUPERFAMILY SSF81901 206 245 6.28E-5 T 22-04-2016 R615_RS00470 6ec2bc72de5b704bb18ea1280d4f5ffa 600 SUPERFAMILY SSF81901 33 130 6.28E-5 T 22-04-2016 R615_RS14185 3c8b6d1ae9bc9248f5425022b0169847 410 SMART SM00471 224 359 0.0063 T 22-04-2016 IPR003607 HD/PDEase domain R615_RS14185 3c8b6d1ae9bc9248f5425022b0169847 410 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 43.734 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 R615_RS14185 3c8b6d1ae9bc9248f5425022b0169847 410 Pfam PF01966 HD domain 231 306 2.7E-6 T 22-04-2016 IPR006674 HD domain R615_RS14185 3c8b6d1ae9bc9248f5425022b0169847 410 Gene3D G3DSA:1.10.3090.10 122 360 2.3E-55 T 22-04-2016 R615_RS14185 3c8b6d1ae9bc9248f5425022b0169847 410 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.232 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 R615_RS14185 3c8b6d1ae9bc9248f5425022b0169847 410 Gene3D G3DSA:3.30.460.10 1 121 2.4E-32 T 22-04-2016 R615_RS14185 3c8b6d1ae9bc9248f5425022b0169847 410 PIRSF PIRSF000813 1 408 3.1E-196 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 R615_RS14185 3c8b6d1ae9bc9248f5425022b0169847 410 Pfam PF01743 Poly A polymerase head domain 3 122 9.5E-19 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 R615_RS14185 3c8b6d1ae9bc9248f5425022b0169847 410 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 3.9E-12 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain R615_RS14185 3c8b6d1ae9bc9248f5425022b0169847 410 SUPERFAMILY SSF81301 1 119 1.42E-30 T 22-04-2016 R615_RS14185 3c8b6d1ae9bc9248f5425022b0169847 410 SUPERFAMILY SSF81891 120 360 7.06E-52 T 22-04-2016 R615_RS14185 3c8b6d1ae9bc9248f5425022b0169847 410 PANTHER PTHR13734 1 298 7.0E-68 T 22-04-2016 R615_RS14795 b95288633bfdc36114856bd061382ef3 69 PANTHER PTHR33280 1 69 1.3E-35 T 22-04-2016 R615_RS14795 b95288633bfdc36114856bd061382ef3 69 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.5E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS14795 b95288633bfdc36114856bd061382ef3 69 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.5E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS14795 b95288633bfdc36114856bd061382ef3 69 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.5E-21 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS14795 b95288633bfdc36114856bd061382ef3 69 Pfam PF01197 Ribosomal protein L31 1 65 6.4E-31 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS14795 b95288633bfdc36114856bd061382ef3 69 SUPERFAMILY SSF143800 1 67 1.1E-27 T 22-04-2016 R615_RS14795 b95288633bfdc36114856bd061382ef3 69 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS14795 b95288633bfdc36114856bd061382ef3 69 PANTHER PTHR33280:SF2 1 69 1.3E-35 T 22-04-2016 R615_RS14795 b95288633bfdc36114856bd061382ef3 69 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.077 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS14795 b95288633bfdc36114856bd061382ef3 69 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 1.5E-32 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS07295 7ecb9b255a08473a0037b3b4e1f278eb 423 Gene3D G3DSA:3.40.50.720 13 181 1.9E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07295 7ecb9b255a08473a0037b3b4e1f278eb 423 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 13 145 2.2E-14 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 R615_RS07295 7ecb9b255a08473a0037b3b4e1f278eb 423 PANTHER PTHR12286:SF4 4 422 6.3E-132 T 22-04-2016 R615_RS07295 7ecb9b255a08473a0037b3b4e1f278eb 423 SUPERFAMILY SSF51735 13 167 3.44E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07295 7ecb9b255a08473a0037b3b4e1f278eb 423 PANTHER PTHR12286 4 422 6.3E-132 T 22-04-2016 R615_RS12395 af836620f6c238036769118942b8658a 141 Gene3D G3DSA:3.30.70.141 1 139 4.6E-59 T 22-04-2016 R615_RS12395 af836620f6c238036769118942b8658a 141 PANTHER PTHR11349 1 140 2.9E-73 T 22-04-2016 R615_RS12395 af836620f6c238036769118942b8658a 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.8E-55 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS12395 af836620f6c238036769118942b8658a 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.545 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS12395 af836620f6c238036769118942b8658a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.1E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS12395 af836620f6c238036769118942b8658a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.1E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS12395 af836620f6c238036769118942b8658a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.1E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS12395 af836620f6c238036769118942b8658a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.1E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS12395 af836620f6c238036769118942b8658a 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.1E-40 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS12395 af836620f6c238036769118942b8658a 141 SUPERFAMILY SSF54919 1 140 3.54E-57 T 22-04-2016 R615_RS12395 af836620f6c238036769118942b8658a 141 SMART SM00562 3 140 1.4E-87 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 R615_RS01085 86a5580cefee6fc06547d4fe06338ae0 415 Gene3D G3DSA:3.30.565.10 341 374 1.8E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS01085 86a5580cefee6fc06547d4fe06338ae0 415 PANTHER PTHR24423:SF491 268 391 3.1E-39 T 22-04-2016 R615_RS01085 86a5580cefee6fc06547d4fe06338ae0 415 SMART SM00388 289 354 1.0E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS01085 86a5580cefee6fc06547d4fe06338ae0 415 Pfam PF17152 Periplasmic sensor domain 41 106 5.3E-12 T 22-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 R615_RS01085 86a5580cefee6fc06547d4fe06338ae0 415 SUPERFAMILY SSF47384 275 355 5.3E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS01085 86a5580cefee6fc06547d4fe06338ae0 415 Gene3D G3DSA:1.10.287.130 284 340 1.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS01085 86a5580cefee6fc06547d4fe06338ae0 415 SUPERFAMILY SSF158472 203 252 1.31E-8 T 22-04-2016 R615_RS01085 86a5580cefee6fc06547d4fe06338ae0 415 SMART SM00304 203 256 1.0E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS01085 86a5580cefee6fc06547d4fe06338ae0 415 Pfam PF00512 His Kinase A (phospho-acceptor) domain 289 354 4.0E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS01085 86a5580cefee6fc06547d4fe06338ae0 415 PANTHER PTHR24423 268 391 3.1E-39 T 22-04-2016 R615_RS01085 86a5580cefee6fc06547d4fe06338ae0 415 Pfam PF00672 HAMP domain 184 252 5.3E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS13155 530f5bc8e5aef520969cafb5fed7e4b5 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 309 2.1E-114 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS13155 530f5bc8e5aef520969cafb5fed7e4b5 311 PIRSF PIRSF004486 2 311 1.0E-101 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS13155 530f5bc8e5aef520969cafb5fed7e4b5 311 Pfam PF01795 MraW methylase family 6 309 1.9E-112 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS13155 530f5bc8e5aef520969cafb5fed7e4b5 311 SUPERFAMILY SSF53335 215 310 5.7E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS13155 530f5bc8e5aef520969cafb5fed7e4b5 311 SUPERFAMILY SSF53335 8 115 5.7E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS13155 530f5bc8e5aef520969cafb5fed7e4b5 311 Gene3D G3DSA:1.10.150.170 114 217 2.6E-37 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS13155 530f5bc8e5aef520969cafb5fed7e4b5 311 PANTHER PTHR11265 1 311 6.8E-147 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS13155 530f5bc8e5aef520969cafb5fed7e4b5 311 Gene3D G3DSA:3.40.50.150 218 310 4.1E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS13155 530f5bc8e5aef520969cafb5fed7e4b5 311 Gene3D G3DSA:3.40.50.150 8 112 4.1E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS13155 530f5bc8e5aef520969cafb5fed7e4b5 311 SUPERFAMILY SSF81799 116 215 4.32E-36 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS13155 530f5bc8e5aef520969cafb5fed7e4b5 311 PANTHER PTHR11265:SF0 1 311 6.8E-147 T 22-04-2016 R615_RS13155 530f5bc8e5aef520969cafb5fed7e4b5 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 8 310 38.959 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS08120 4da971314c906566ddee81748232d871 202 SUPERFAMILY SSF53098 8 190 2.66E-29 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS08120 4da971314c906566ddee81748232d871 202 PANTHER PTHR13620:SF0 2 188 3.1E-22 T 22-04-2016 R615_RS08120 4da971314c906566ddee81748232d871 202 SMART SM00474 27 199 3.4E-7 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 R615_RS08120 4da971314c906566ddee81748232d871 202 PANTHER PTHR13620 2 188 3.1E-22 T 22-04-2016 R615_RS08120 4da971314c906566ddee81748232d871 202 Gene3D G3DSA:3.30.420.10 41 190 4.7E-18 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS08120 4da971314c906566ddee81748232d871 202 Pfam PF01612 3'-5' exonuclease 29 187 1.1E-18 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 R615_RS09060 a11dd6e5de024b6a5350188ad02d6374 224 SUPERFAMILY SSF81342 7 193 5.02E-33 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 R615_RS09060 a11dd6e5de024b6a5350188ad02d6374 224 Gene3D G3DSA:1.20.950.20 39 193 9.0E-8 T 22-04-2016 R615_RS09060 a11dd6e5de024b6a5350188ad02d6374 224 Pfam PF01292 Prokaryotic cytochrome b561 11 190 5.5E-24 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.844 T 22-04-2016 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 2.8E-249 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 SUPERFAMILY SSF55261 291 421 6.54E-47 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 Pfam PF02938 GAD domain 309 408 5.6E-30 T 22-04-2016 IPR029351 GAD domain R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 PANTHER PTHR22594 372 571 6.3E-254 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 PANTHER PTHR22594 1 298 6.3E-254 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 Gene3D G3DSA:3.30.930.10 133 277 4.0E-113 T 22-04-2016 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 Gene3D G3DSA:3.30.930.10 416 585 4.0E-113 T 22-04-2016 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 2.9E-18 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 Gene3D G3DSA:2.40.50.140 1 107 1.7E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 SUPERFAMILY SSF50249 1 105 2.1E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 558 3.6E-111 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 SUPERFAMILY SSF55681 426 585 1.14E-103 T 22-04-2016 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 SUPERFAMILY SSF55681 116 293 1.14E-103 T 22-04-2016 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 PANTHER PTHR22594:SF5 372 571 6.3E-254 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 PANTHER PTHR22594:SF5 1 298 6.3E-254 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 2.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 2.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS07705 4ba5f3fd8ee922886036d4e84790742a 592 Gene3D G3DSA:3.30.1360.30 278 415 6.2E-49 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 Gene3D G3DSA:3.40.50.300 201 266 4.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 Gene3D G3DSA:3.40.50.300 4 130 4.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 4.8E-38 T 22-04-2016 IPR013029 Domain of unknown function DUF933 R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 SUPERFAMILY SSF81271 279 360 2.62E-35 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 Gene3D G3DSA:1.10.150.300 131 200 2.9E-26 T 22-04-2016 IPR023192 TGS-like domain R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 7.7E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 7.7E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 7.7E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 7.7E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 Gene3D G3DSA:3.10.20.30 267 363 3.2E-48 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 Pfam PF01926 50S ribosome-binding GTPase 5 118 2.4E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 SUPERFAMILY SSF52540 3 301 2.34E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.701 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 PANTHER PTHR23305:SF12 1 363 1.8E-203 T 22-04-2016 R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 PIRSF PIRSF006641 1 363 2.0E-156 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.8E-159 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 R615_RS13000 ca2a8764ff90ee29d78179408bd54dc1 363 PANTHER PTHR23305 1 363 1.8E-203 T 22-04-2016 R615_RS05265 5c8cdfa5e9db0e4c57f5ec1f856b7c95 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 93 1.0E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 R615_RS05265 5c8cdfa5e9db0e4c57f5ec1f856b7c95 320 Gene3D G3DSA:3.90.180.10 6 152 4.9E-38 T 22-04-2016 IPR011032 GroES-like R615_RS05265 5c8cdfa5e9db0e4c57f5ec1f856b7c95 320 PANTHER PTHR11695 19 258 3.5E-56 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 R615_RS05265 5c8cdfa5e9db0e4c57f5ec1f856b7c95 320 Gene3D G3DSA:3.40.50.720 153 254 1.4E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS05265 5c8cdfa5e9db0e4c57f5ec1f856b7c95 320 PANTHER PTHR11695:SF294 19 258 3.5E-56 T 22-04-2016 R615_RS05265 5c8cdfa5e9db0e4c57f5ec1f856b7c95 320 SUPERFAMILY SSF50129 6 154 1.52E-31 T 22-04-2016 IPR011032 GroES-like R615_RS05265 5c8cdfa5e9db0e4c57f5ec1f856b7c95 320 SMART SM00829 14 318 1.8E-11 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 R615_RS05265 5c8cdfa5e9db0e4c57f5ec1f856b7c95 320 Pfam PF00107 Zinc-binding dehydrogenase 158 258 5.0E-9 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 R615_RS05265 5c8cdfa5e9db0e4c57f5ec1f856b7c95 320 SUPERFAMILY SSF51735 121 260 5.44E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 PANTHER PTHR11911 303 492 4.5E-240 T 22-04-2016 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 PANTHER PTHR11911 1 285 4.5E-240 T 22-04-2016 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 480 1.9E-158 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 461 1.4E-183 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 SUPERFAMILY SSF54631 95 203 2.32E-26 T 22-04-2016 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 PIRSF PIRSF000130 1 494 2.1E-198 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 299 311 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 493 82.598 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 SUPERFAMILY SSF51412 216 484 3.66E-122 T 22-04-2016 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 SUPERFAMILY SSF51412 2 90 3.66E-122 T 22-04-2016 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 SMART SM00116 157 205 1.3E-4 T 22-04-2016 IPR000644 CBS domain R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 SMART SM00116 96 142 3.5E-10 T 22-04-2016 IPR000644 CBS domain R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 Gene3D G3DSA:3.20.20.70 2 492 1.3E-193 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 SMART SM01240 7 480 0.0 T 22-04-2016 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 PANTHER PTHR11911:SF6 303 492 4.5E-240 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 PANTHER PTHR11911:SF6 1 285 4.5E-240 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 Pfam PF00571 CBS domain 148 203 0.0045 T 22-04-2016 IPR000644 CBS domain R615_RS10910 437300bf2d82b023eca28e6bd73635d9 494 Pfam PF00571 CBS domain 95 139 3.7E-11 T 22-04-2016 IPR000644 CBS domain R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 Hamap MF_00235 Adenylate kinase [adk]. 1 217 50.974 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 Pfam PF00406 Adenylate kinase 5 185 5.7E-56 T 22-04-2016 R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.0E-16 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 PANTHER PTHR23359 1 216 4.8E-105 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 PRINTS PR00094 Adenylate kinase signature 32 46 2.8E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 PRINTS PR00094 Adenylate kinase signature 4 17 2.8E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 PRINTS PR00094 Adenylate kinase signature 173 187 2.8E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 PRINTS PR00094 Adenylate kinase signature 81 97 2.8E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 PRINTS PR00094 Adenylate kinase signature 156 171 2.8E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 SUPERFAMILY SSF52540 1 212 6.2E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 187 3.5E-74 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 R615_RS12460 0acdbaf6b0f42cbf1b6249d01bf97681 217 Gene3D G3DSA:3.40.50.300 1 215 1.1E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10040 1478f1fdd83e5804977514bbe89bbe71 264 Gene3D G3DSA:3.30.950.10 138 256 2.0E-28 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 R615_RS10040 1478f1fdd83e5804977514bbe89bbe71 264 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 23 227 2.0E-41 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 R615_RS10040 1478f1fdd83e5804977514bbe89bbe71 264 PANTHER PTHR21091 17 227 6.6E-66 T 22-04-2016 R615_RS10040 1478f1fdd83e5804977514bbe89bbe71 264 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 102 135 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 R615_RS10040 1478f1fdd83e5804977514bbe89bbe71 264 PANTHER PTHR21091:SF16 17 227 6.6E-66 T 22-04-2016 R615_RS10040 1478f1fdd83e5804977514bbe89bbe71 264 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 22 250 1.3E-81 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 R615_RS10040 1478f1fdd83e5804977514bbe89bbe71 264 Gene3D G3DSA:3.40.1010.10 22 137 2.1E-43 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 R615_RS10040 1478f1fdd83e5804977514bbe89bbe71 264 SUPERFAMILY SSF53790 18 258 3.4E-68 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 R615_RS10300 24add013ae2237a1ed3d1165363f5111 334 Pfam PF00581 Rhodanese-like domain 118 213 5.9E-8 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS10300 24add013ae2237a1ed3d1165363f5111 334 SUPERFAMILY SSF52821 97 244 1.65E-31 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS10300 24add013ae2237a1ed3d1165363f5111 334 SMART SM00450 116 217 1.8E-20 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS10300 24add013ae2237a1ed3d1165363f5111 334 PANTHER PTHR22778 8 293 2.3E-111 T 22-04-2016 R615_RS10300 24add013ae2237a1ed3d1165363f5111 334 Hamap MF_00469 UPF0176 protein YceA [yceA]. 5 257 46.161 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 R615_RS10300 24add013ae2237a1ed3d1165363f5111 334 Gene3D G3DSA:3.40.250.10 105 229 3.2E-41 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS10300 24add013ae2237a1ed3d1165363f5111 334 PANTHER PTHR22778:SF12 8 293 2.3E-111 T 22-04-2016 R615_RS05085 369570ea5e62af9008af45ffb80f6a67 381 Gene3D G3DSA:3.40.1690.10 218 353 8.7E-62 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal R615_RS05085 369570ea5e62af9008af45ffb80f6a67 381 SUPERFAMILY SSF160544 244 351 1.29E-41 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal R615_RS05085 369570ea5e62af9008af45ffb80f6a67 381 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 351 1.8E-126 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 R615_RS05085 369570ea5e62af9008af45ffb80f6a67 381 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 1.3E-128 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 R615_RS05085 369570ea5e62af9008af45ffb80f6a67 381 PANTHER PTHR30531 1 361 6.4E-172 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 R615_RS05085 369570ea5e62af9008af45ffb80f6a67 381 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 4.5E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 R615_RS05085 369570ea5e62af9008af45ffb80f6a67 381 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 4.5E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 R615_RS05085 369570ea5e62af9008af45ffb80f6a67 381 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 4.5E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 R615_RS05085 369570ea5e62af9008af45ffb80f6a67 381 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 4.5E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 R615_RS05085 369570ea5e62af9008af45ffb80f6a67 381 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 4.5E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 R615_RS05085 369570ea5e62af9008af45ffb80f6a67 381 PANTHER PTHR30531:SF4 1 361 6.4E-172 T 22-04-2016 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 PANTHER PTHR10668 59 542 6.8E-49 T 22-04-2016 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 Pfam PF00732 GMC oxidoreductase 151 347 2.7E-6 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 SUPERFAMILY SSF51905 493 549 9.07E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 SUPERFAMILY SSF51905 59 348 9.07E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 157 180 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 Gene3D G3DSA:3.50.50.60 49 204 2.6E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 Gene3D G3DSA:3.50.50.60 492 549 2.6E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 Gene3D G3DSA:3.50.50.60 271 376 2.6E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 PANTHER PTHR10668:SF68 59 542 6.8E-49 T 22-04-2016 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 Gene3D G3DSA:3.30.410.10 377 487 9.2E-61 T 22-04-2016 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 Gene3D G3DSA:3.30.410.10 205 261 9.2E-61 T 22-04-2016 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 Pfam PF05199 GMC oxidoreductase 468 542 8.1E-16 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 R615_RS15075 2f35da5ca7c075caec476f1418a61d49 551 SUPERFAMILY SSF54373 366 496 5.89E-44 T 22-04-2016 R615_RS06990 af940fd9c4b9048adea027ef94759394 124 SMART SM00448 3 115 3.7E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS06990 af940fd9c4b9048adea027ef94759394 124 PANTHER PTHR26402 3 115 4.2E-25 T 22-04-2016 R615_RS06990 af940fd9c4b9048adea027ef94759394 124 SUPERFAMILY SSF52172 3 116 1.25E-26 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS06990 af940fd9c4b9048adea027ef94759394 124 Gene3D G3DSA:3.40.50.2300 2 116 4.5E-24 T 22-04-2016 R615_RS06990 af940fd9c4b9048adea027ef94759394 124 PANTHER PTHR26402:SF547 3 115 4.2E-25 T 22-04-2016 R615_RS06990 af940fd9c4b9048adea027ef94759394 124 Pfam PF00072 Response regulator receiver domain 5 114 8.9E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 Pfam PF00875 DNA photolyase 3 158 4.8E-22 T 22-04-2016 IPR006050 DNA photolyase, N-terminal R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 Gene3D G3DSA:3.40.50.620 2 104 4.3E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 PANTHER PTHR11455 3 429 7.8E-110 T 22-04-2016 R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 Gene3D G3DSA:1.10.579.10 285 455 3.1E-53 T 22-04-2016 R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 2 427 3.2E-118 T 22-04-2016 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 Pfam PF03441 FAD binding domain of DNA photolyase 276 455 2.9E-46 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 SUPERFAMILY SSF48173 200 453 1.03E-70 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 PANTHER PTHR11455:SF22 3 429 7.8E-110 T 22-04-2016 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 PRINTS PR00147 DNA photolyase signature 386 400 1.1E-10 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 PRINTS PR00147 DNA photolyase signature 347 365 1.1E-10 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 PRINTS PR00147 DNA photolyase signature 327 343 1.1E-10 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 SUPERFAMILY SSF52425 2 162 7.72E-31 T 22-04-2016 IPR006050 DNA photolyase, N-terminal R615_RS03685 2947edc1ce009747b1707e5c9184f53c 464 Gene3D G3DSA:1.25.40.80 128 284 2.3E-38 T 22-04-2016 R615_RS03710 b0b2e00fcccc0471bae09906d049f663 387 Gene3D G3DSA:1.20.1090.10 186 387 2.0E-65 T 22-04-2016 R615_RS03710 b0b2e00fcccc0471bae09906d049f663 387 PANTHER PTHR11496:SF68 1 387 2.2E-132 T 22-04-2016 R615_RS03710 b0b2e00fcccc0471bae09906d049f663 387 SUPERFAMILY SSF56796 2 387 5.1E-117 T 22-04-2016 R615_RS03710 b0b2e00fcccc0471bae09906d049f663 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 378 1.7E-113 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 R615_RS03710 b0b2e00fcccc0471bae09906d049f663 387 PANTHER PTHR11496 1 387 2.2E-132 T 22-04-2016 R615_RS03710 b0b2e00fcccc0471bae09906d049f663 387 Gene3D G3DSA:3.40.50.1970 1 185 2.7E-51 T 22-04-2016 R615_RS03710 b0b2e00fcccc0471bae09906d049f663 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 PANTHER PTHR30244:SF1 3 188 2.4E-120 T 22-04-2016 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 PANTHER PTHR30244:SF1 1033 1205 2.4E-120 T 22-04-2016 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.2E-43 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 Pfam PF00700 Bacterial flagellin C-terminal helical region 1120 1205 6.1E-25 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 SUPERFAMILY SSF64518 1 200 1.06E-49 T 22-04-2016 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 SUPERFAMILY SSF64518 261 365 1.06E-49 T 22-04-2016 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 SUPERFAMILY SSF64518 427 490 1.06E-49 T 22-04-2016 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 Gene3D G3DSA:1.20.1330.10 1108 1161 1.3E-50 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 Gene3D G3DSA:1.20.1330.10 54 170 1.3E-50 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 Pfam PF07196 Flagellin hook IN motif 254 297 4.3E-5 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 Pfam PF07196 Flagellin hook IN motif 900 928 6.7E-5 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 SUPERFAMILY SSF64518 870 1027 1.57E-36 T 22-04-2016 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 SUPERFAMILY SSF64518 1055 1205 1.57E-36 T 22-04-2016 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 PANTHER PTHR30244 3 188 2.4E-120 T 22-04-2016 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 PANTHER PTHR30244 1033 1205 2.4E-120 T 22-04-2016 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 PRINTS PR00207 Flagellin signature 76 95 6.1E-24 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 PRINTS PR00207 Flagellin signature 37 54 6.1E-24 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 R615_RS17310 70c103bdbe6d9f5898184f21eb7fce50 1206 PRINTS PR00207 Flagellin signature 111 134 6.1E-24 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 R615_RS02275 53c817cc62cc821414f56efae9af1d33 259 Pfam PF01476 LysM domain 42 85 6.1E-14 T 22-04-2016 IPR018392 LysM domain R615_RS02275 53c817cc62cc821414f56efae9af1d33 259 PANTHER PTHR21666 135 252 1.7E-37 T 22-04-2016 R615_RS02275 53c817cc62cc821414f56efae9af1d33 259 Gene3D G3DSA:3.10.350.10 41 84 6.4E-16 T 22-04-2016 IPR018392 LysM domain R615_RS02275 53c817cc62cc821414f56efae9af1d33 259 SMART SM00257 41 85 8.7E-16 T 22-04-2016 IPR018392 LysM domain R615_RS02275 53c817cc62cc821414f56efae9af1d33 259 Pfam PF01551 Peptidase family M23 154 247 7.4E-30 T 22-04-2016 IPR016047 Peptidase M23 R615_RS02275 53c817cc62cc821414f56efae9af1d33 259 Gene3D G3DSA:2.70.70.10 112 253 5.1E-40 T 22-04-2016 R615_RS02275 53c817cc62cc821414f56efae9af1d33 259 SUPERFAMILY SSF51261 42 251 3.4E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif R615_RS03495 01da1e2eef836aadbdd9134ccefa5202 1015 Pfam PF02811 PHP domain 12 102 6.1E-14 T 22-04-2016 IPR004013 PHP domain GO:0003824 R615_RS03495 01da1e2eef836aadbdd9134ccefa5202 1015 SUPERFAMILY SSF89550 10 194 2.75E-11 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 R615_RS03495 01da1e2eef836aadbdd9134ccefa5202 1015 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 271 686 1.1E-135 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS03495 01da1e2eef836aadbdd9134ccefa5202 1015 Gene3D G3DSA:2.40.50.140 914 986 3.7E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS03495 01da1e2eef836aadbdd9134ccefa5202 1015 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 11 849 4.7E-154 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS03495 01da1e2eef836aadbdd9134ccefa5202 1015 Pfam PF14579 Helix-hairpin-helix motif 761 843 1.9E-18 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS03495 01da1e2eef836aadbdd9134ccefa5202 1015 PANTHER PTHR32294 6 1004 0.0 T 22-04-2016 R615_RS03495 01da1e2eef836aadbdd9134ccefa5202 1015 PANTHER PTHR32294:SF4 6 1004 0.0 T 22-04-2016 R615_RS03495 01da1e2eef836aadbdd9134ccefa5202 1015 SMART SM00481 11 80 3.0E-13 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 R615_RS03495 01da1e2eef836aadbdd9134ccefa5202 1015 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 10 1015 12.76 T 22-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS03495 01da1e2eef836aadbdd9134ccefa5202 1015 Gene3D G3DSA:3.20.20.140 11 81 1.2E-9 T 22-04-2016 R615_RS07410 7fd9cfedc8a9cc1e437e127538b87975 183 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 61 77 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 R615_RS07410 7fd9cfedc8a9cc1e437e127538b87975 183 Pfam PF01227 GTP cyclohydrolase I 7 181 3.0E-75 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 R615_RS07410 7fd9cfedc8a9cc1e437e127538b87975 183 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 109 119 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 R615_RS07410 7fd9cfedc8a9cc1e437e127538b87975 183 PANTHER PTHR11109 1 181 8.1E-110 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 R615_RS07410 7fd9cfedc8a9cc1e437e127538b87975 183 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 7 181 1.9E-76 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 R615_RS07410 7fd9cfedc8a9cc1e437e127538b87975 183 Gene3D G3DSA:3.30.1130.10 54 181 1.6E-62 T 22-04-2016 R615_RS07410 7fd9cfedc8a9cc1e437e127538b87975 183 SUPERFAMILY SSF55620 3 182 8.89E-77 T 22-04-2016 R615_RS07410 7fd9cfedc8a9cc1e437e127538b87975 183 Gene3D G3DSA:1.10.286.10 3 51 2.7E-20 T 22-04-2016 R615_RS07410 7fd9cfedc8a9cc1e437e127538b87975 183 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 182 35.638 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 R615_RS12665 d3e869a4c3f9a384ae7f95498400fd91 222 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 218 3.2E-71 T 22-04-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 R615_RS12665 d3e869a4c3f9a384ae7f95498400fd91 222 SUPERFAMILY SSF53335 1 197 1.03E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12665 d3e869a4c3f9a384ae7f95498400fd91 222 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 220 35.446 T 22-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 R615_RS12665 d3e869a4c3f9a384ae7f95498400fd91 222 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 218 4.7E-59 T 22-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 R615_RS12665 d3e869a4c3f9a384ae7f95498400fd91 222 Gene3D G3DSA:3.40.50.150 16 218 1.1E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12665 d3e869a4c3f9a384ae7f95498400fd91 222 PANTHER PTHR10259:SF16 1 218 2.2E-57 T 22-04-2016 R615_RS12665 d3e869a4c3f9a384ae7f95498400fd91 222 PANTHER PTHR10259 1 218 2.2E-57 T 22-04-2016 R615_RS12665 d3e869a4c3f9a384ae7f95498400fd91 222 PIRSF PIRSF023956 1 222 1.9E-66 T 22-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 R615_RS13230 8bed9162683a5f7bae104227ffdc91a7 200 Gene3D G3DSA:3.30.1020.10 157 194 8.2E-14 T 22-04-2016 R615_RS13230 8bed9162683a5f7bae104227ffdc91a7 200 PANTHER PTHR10681 3 194 5.4E-84 T 22-04-2016 R615_RS13230 8bed9162683a5f7bae104227ffdc91a7 200 Gene3D G3DSA:3.40.30.10 2 156 1.3E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS13230 8bed9162683a5f7bae104227ffdc91a7 200 SUPERFAMILY SSF52833 1 197 1.7E-65 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS13230 8bed9162683a5f7bae104227ffdc91a7 200 PIRSF PIRSF000239 1 199 6.5E-57 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 R615_RS13230 8bed9162683a5f7bae104227ffdc91a7 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 2.2E-13 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 R615_RS13230 8bed9162683a5f7bae104227ffdc91a7 200 Pfam PF00578 AhpC/TSA family 5 139 7.2E-33 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 R615_RS02000 e17cedab319db6a697ca1ffabcaed78f 483 Pfam PF02934 GatB/GatE catalytic domain 5 289 7.2E-109 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 R615_RS02000 e17cedab319db6a697ca1ffabcaed78f 483 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 480 36.202 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 R615_RS02000 e17cedab319db6a697ca1ffabcaed78f 483 SUPERFAMILY SSF55931 4 296 2.03E-116 T 22-04-2016 R615_RS02000 e17cedab319db6a697ca1ffabcaed78f 483 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 479 5.5E-158 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 R615_RS02000 e17cedab319db6a697ca1ffabcaed78f 483 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 144 158 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 R615_RS02000 e17cedab319db6a697ca1ffabcaed78f 483 Pfam PF02637 GatB domain 328 479 1.1E-39 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 R615_RS02000 e17cedab319db6a697ca1ffabcaed78f 483 SMART SM00845 328 479 3.8E-59 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 R615_RS02000 e17cedab319db6a697ca1ffabcaed78f 483 PANTHER PTHR11659 2 482 3.4E-233 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 R615_RS02000 e17cedab319db6a697ca1ffabcaed78f 483 SUPERFAMILY SSF89095 297 401 4.19E-33 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 R615_RS02000 e17cedab319db6a697ca1ffabcaed78f 483 PANTHER PTHR11659:SF0 2 482 3.4E-233 T 22-04-2016 R615_RS16600 f7b94c690463cad9064d4ddaedf73d4b 200 Gene3D G3DSA:3.40.50.10420 3 191 1.1E-52 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain R615_RS16600 f7b94c690463cad9064d4ddaedf73d4b 200 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 185 1.0E-50 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase R615_RS16600 f7b94c690463cad9064d4ddaedf73d4b 200 PIRSF PIRSF006806 1 188 3.5E-41 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase R615_RS16600 f7b94c690463cad9064d4ddaedf73d4b 200 PANTHER PTHR23407 1 188 1.3E-57 T 22-04-2016 R615_RS16600 f7b94c690463cad9064d4ddaedf73d4b 200 PANTHER PTHR23407:SF1 1 188 1.3E-57 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase R615_RS16600 f7b94c690463cad9064d4ddaedf73d4b 200 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 185 3.5E-44 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase R615_RS16600 f7b94c690463cad9064d4ddaedf73d4b 200 SUPERFAMILY SSF100950 1 191 2.51E-51 T 22-04-2016 R615_RS05395 936fd04f705f2aabb468ad534f39d826 197 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 35.804 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 R615_RS05395 936fd04f705f2aabb468ad534f39d826 197 PANTHER PTHR10954 14 194 2.7E-70 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 R615_RS05395 936fd04f705f2aabb468ad534f39d826 197 SUPERFAMILY SSF53098 7 195 6.83E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS05395 936fd04f705f2aabb468ad534f39d826 197 Pfam PF01351 Ribonuclease HII 13 189 4.8E-37 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain R615_RS05395 936fd04f705f2aabb468ad534f39d826 197 Gene3D G3DSA:3.30.420.10 11 150 1.6E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS06740 8db83cfa0e4c57446600e2f9156b07c2 262 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 35.884 T 22-04-2016 IPR005583 Peroxide stress protein YaaA R615_RS06740 8db83cfa0e4c57446600e2f9156b07c2 262 PANTHER PTHR30283:SF3 2 254 3.3E-105 T 22-04-2016 R615_RS06740 8db83cfa0e4c57446600e2f9156b07c2 262 Pfam PF03883 Protein of unknown function (DUF328) 1 243 2.9E-89 T 22-04-2016 IPR005583 Peroxide stress protein YaaA R615_RS06740 8db83cfa0e4c57446600e2f9156b07c2 262 PANTHER PTHR30283 2 254 3.3E-105 T 22-04-2016 R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 SUPERFAMILY SSF48179 191 287 4.42E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 375 3.1E-100 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 Gene3D G3DSA:1.10.1040.10 198 284 8.6E-36 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 SUPERFAMILY SSF51735 1 194 4.17E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 Gene3D G3DSA:3.40.50.720 285 388 1.8E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 Gene3D G3DSA:3.40.50.720 1 197 1.0E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 PIRSF PIRSF500134 1 348 2.0E-122 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 SMART SM00984 300 387 1.7E-13 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.6E-27 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 PIRSF PIRSF000124 1 388 4.5E-135 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 1.4E-31 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 PANTHER PTHR11374 1 375 8.3E-235 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 PANTHER PTHR11374:SF17 1 375 8.3E-235 T 22-04-2016 R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 SUPERFAMILY SSF52413 283 387 1.7E-27 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS04855 1145a664426ddb8be4f565dc24e7b447 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 1.2E-7 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 Gene3D G3DSA:1.10.760.10 326 438 4.1E-33 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 Gene3D G3DSA:1.10.760.10 483 511 4.1E-33 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 Pfam PF07593 ASPIC and UnbV 1112 1188 1.6E-16 T 22-04-2016 IPR011519 ASPIC/UnbV R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 Pfam PF03150 Di-haem cytochrome c peroxidase 105 334 7.7E-33 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 798 858 1.3E-10 T 22-04-2016 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 687 748 1.2E-11 T 22-04-2016 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 Gene3D G3DSA:2.130.10.130 923 934 7.6E-6 T 22-04-2016 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 Gene3D G3DSA:2.130.10.130 631 752 2.9E-9 T 22-04-2016 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 Gene3D G3DSA:2.130.10.130 1012 1091 7.6E-6 T 22-04-2016 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 Gene3D G3DSA:2.130.10.130 761 922 4.2E-11 T 22-04-2016 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 Gene3D G3DSA:1.10.760.10 101 201 3.2E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 Gene3D G3DSA:1.10.760.10 243 325 3.2E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 SUPERFAMILY SSF46626 490 511 7.07E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 PANTHER PTHR30600 106 200 7.5E-34 T 22-04-2016 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 PANTHER PTHR30600 484 519 7.5E-34 T 22-04-2016 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 PANTHER PTHR30600 228 438 7.5E-34 T 22-04-2016 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 SUPERFAMILY SSF69318 1029 1089 1.44E-6 T 22-04-2016 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 SUPERFAMILY SSF46626 323 439 7.07E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 SUPERFAMILY SSF69318 621 942 1.22E-38 T 22-04-2016 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 SUPERFAMILY SSF46626 240 320 6.45E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS17630 cedfac985f8320f4ce0abdd2f93caf2c 1197 SUPERFAMILY SSF46626 100 198 6.45E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS01630 67a6e525907d5b5d550a7560a3079993 460 SMART SM00849 20 214 7.9E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS01630 67a6e525907d5b5d550a7560a3079993 460 Gene3D G3DSA:3.60.15.10 8 262 2.5E-63 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS01630 67a6e525907d5b5d550a7560a3079993 460 SUPERFAMILY SSF56281 10 431 1.4E-76 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS01630 67a6e525907d5b5d550a7560a3079993 460 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 374 414 7.2E-8 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain R615_RS01630 67a6e525907d5b5d550a7560a3079993 460 PANTHER PTHR11203:SF22 1 430 1.5E-140 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 R615_RS01630 67a6e525907d5b5d550a7560a3079993 460 Pfam PF00753 Metallo-beta-lactamase superfamily 22 183 8.3E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS01630 67a6e525907d5b5d550a7560a3079993 460 PANTHER PTHR11203 1 430 1.5E-140 T 22-04-2016 R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 PIRSF PIRSF000410 5 282 6.2E-98 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 Pfam PF03705 CheR methyltransferase, all-alpha domain 21 72 1.9E-13 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 Pfam PF01739 CheR methyltransferase, SAM binding domain 87 277 1.4E-63 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 Gene3D G3DSA:3.40.50.150 86 279 9.2E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 SUPERFAMILY SSF47757 14 86 1.44E-17 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 Gene3D G3DSA:1.10.155.10 13 85 3.1E-21 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 PANTHER PTHR24422 13 278 9.8E-87 T 22-04-2016 R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 2.2E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 PRINTS PR00996 Glutamate methyltransferase family signature 240 263 2.2E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 PRINTS PR00996 Glutamate methyltransferase family signature 42 55 2.2E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 PRINTS PR00996 Glutamate methyltransferase family signature 152 168 2.2E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 PRINTS PR00996 Glutamate methyltransferase family signature 80 92 2.2E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 PRINTS PR00996 Glutamate methyltransferase family signature 221 235 2.2E-42 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 SMART SM00138 20 281 1.9E-102 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 SUPERFAMILY SSF53335 87 280 2.82E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS05015 faeff677ac79bf99dc9ef1e706a3af24 282 PANTHER PTHR24422:SF13 13 278 9.8E-87 T 22-04-2016 R615_RS13620 754f183700ee670ba379b01d9fa39e5b 176 PIRSF PIRSF006135 3 176 6.1E-54 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 R615_RS13620 754f183700ee670ba379b01d9fa39e5b 176 Gene3D G3DSA:3.40.50.300 5 176 3.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13620 754f183700ee670ba379b01d9fa39e5b 176 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 6 174 3.6E-58 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 R615_RS13620 754f183700ee670ba379b01d9fa39e5b 176 SUPERFAMILY SSF52540 6 176 4.56E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13620 754f183700ee670ba379b01d9fa39e5b 176 PANTHER PTHR34848 6 176 4.0E-66 T 22-04-2016 R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 PANTHER PTHR10799:SF774 82 460 3.3E-80 T 22-04-2016 R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 PANTHER PTHR10799:SF774 594 613 3.3E-80 T 22-04-2016 R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 SUPERFAMILY SSF55073 207 365 8.63E-52 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 Gene3D G3DSA:3.30.70.270 203 369 2.4E-59 T 22-04-2016 R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 200 360 1.9E-43 T 22-04-2016 IPR000160 GGDEF domain R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 PANTHER PTHR10799 82 460 3.3E-80 T 22-04-2016 R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 PANTHER PTHR10799 594 613 3.3E-80 T 22-04-2016 R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 SUPERFAMILY SSF141868 379 631 6.15E-84 T 22-04-2016 IPR001633 EAL domain R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 Gene3D G3DSA:3.30.450.20 71 190 6.8E-7 T 22-04-2016 R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 SMART SM00052 373 625 2.4E-105 T 22-04-2016 IPR001633 EAL domain R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 SMART SM00267 191 363 1.5E-65 T 22-04-2016 IPR000160 GGDEF domain R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 Pfam PF00563 EAL domain 380 620 8.5E-68 T 22-04-2016 IPR001633 EAL domain R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 SUPERFAMILY SSF55785 66 189 4.26E-5 T 22-04-2016 IPR000014 PAS domain R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 Gene3D G3DSA:3.20.20.450 376 629 2.3E-88 T 22-04-2016 IPR001633 EAL domain R615_RS07365 d0568d98e80fea96f33030e44b8e2f95 647 Pfam PF00990 Diguanylate cyclase, GGDEF domain 202 358 8.9E-50 T 22-04-2016 IPR000160 GGDEF domain R615_RS16350 0522955705cda09b2c2bc7afe2243375 500 PANTHER PTHR30005:SF4 10 499 4.5E-182 T 22-04-2016 R615_RS16350 0522955705cda09b2c2bc7afe2243375 500 SUPERFAMILY SSF53067 137 308 1.11E-44 T 22-04-2016 R615_RS16350 0522955705cda09b2c2bc7afe2243375 500 PANTHER PTHR30005 10 499 4.5E-182 T 22-04-2016 R615_RS16350 0522955705cda09b2c2bc7afe2243375 500 SUPERFAMILY SSF53067 12 132 4.78E-35 T 22-04-2016 R615_RS16350 0522955705cda09b2c2bc7afe2243375 500 SUPERFAMILY SSF109604 313 499 2.67E-49 T 22-04-2016 R615_RS16350 0522955705cda09b2c2bc7afe2243375 500 Pfam PF02541 Ppx/GppA phosphatase family 25 307 4.5E-79 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 R615_RS16350 0522955705cda09b2c2bc7afe2243375 500 Gene3D G3DSA:3.30.420.40 8 132 1.1E-43 T 22-04-2016 R615_RS16350 0522955705cda09b2c2bc7afe2243375 500 PIRSF PIRSF001267 2 500 5.1E-193 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 R615_RS16350 0522955705cda09b2c2bc7afe2243375 500 Gene3D G3DSA:3.30.420.150 134 309 4.2E-51 T 22-04-2016 R615_RS16350 0522955705cda09b2c2bc7afe2243375 500 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 306 1.2E-97 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 R615_RS03755 cf2393ea9296323b99d23568433d66f8 112 Gene3D G3DSA:1.10.260.40 7 58 1.7E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS03755 cf2393ea9296323b99d23568433d66f8 112 Pfam PF01381 Helix-turn-helix 8 58 8.9E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS03755 cf2393ea9296323b99d23568433d66f8 112 SMART SM00530 7 61 1.4E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS03755 cf2393ea9296323b99d23568433d66f8 112 SUPERFAMILY SSF47413 3 58 8.31E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS06130 db663d80716de81ccf359b7188b0964c 164 PANTHER PTHR30265 1 160 3.4E-25 T 22-04-2016 R615_RS06130 db663d80716de81ccf359b7188b0964c 164 PANTHER PTHR30265:SF3 1 160 3.4E-25 T 22-04-2016 R615_RS06130 db663d80716de81ccf359b7188b0964c 164 Pfam PF02357 Transcription termination factor nusG 6 97 8.2E-17 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 R615_RS06130 db663d80716de81ccf359b7188b0964c 164 SUPERFAMILY SSF82679 5 103 1.31E-23 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 R615_RS06130 db663d80716de81ccf359b7188b0964c 164 SMART SM00738 4 103 1.0E-14 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 R615_RS06130 db663d80716de81ccf359b7188b0964c 164 Gene3D G3DSA:3.30.70.940 6 103 1.4E-13 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 R615_RS06020 c161d3266f521cf4d78fe42637dea54f 206 Pfam PF01300 Telomere recombination 22 198 2.0E-40 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 R615_RS06020 c161d3266f521cf4d78fe42637dea54f 206 Gene3D G3DSA:3.90.870.10 3 204 2.0E-58 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain R615_RS06020 c161d3266f521cf4d78fe42637dea54f 206 PANTHER PTHR17490 2 205 3.4E-88 T 22-04-2016 R615_RS06020 c161d3266f521cf4d78fe42637dea54f 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 6.5E-58 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 R615_RS06020 c161d3266f521cf4d78fe42637dea54f 206 PANTHER PTHR17490:SF7 2 205 3.4E-88 T 22-04-2016 R615_RS06020 c161d3266f521cf4d78fe42637dea54f 206 SUPERFAMILY SSF55821 2 204 1.71E-61 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 Gene3D G3DSA:3.60.40.10 5 244 6.5E-44 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 Pfam PF13672 Protein phosphatase 2C 19 212 2.1E-12 T 22-04-2016 R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 396 408 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 SMART SM00220 277 554 5.7E-14 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 Gene3D G3DSA:1.10.510.10 375 490 4.8E-31 T 22-04-2016 R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 Pfam PF00069 Protein kinase domain 282 542 9.0E-35 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 Gene3D G3DSA:3.30.200.20 271 374 1.7E-10 T 22-04-2016 R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 SUPERFAMILY SSF81606 6 245 2.62E-46 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 PANTHER PTHR24362 273 526 9.0E-42 T 22-04-2016 R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 SMART SM00331 19 244 2.7E-6 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 PANTHER PTHR24362:SF160 273 526 9.0E-42 T 22-04-2016 R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 SMART SM00332 4 242 3.6E-13 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS10015 45c10049a8e7edddfeb7a920af7264d2 583 SUPERFAMILY SSF56112 259 539 3.1E-49 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS07205 3153ce025bc9ef50b386f8080eec5906 187 Pfam PF14065 Protein of unknown function (DUF4255) 9 176 1.1E-28 T 22-04-2016 IPR025351 Protein of unknown function DUF4255 R615_RS04295 112cf4ada21ce10b09e2120ad0d3709e 173 PANTHER PTHR11079:SF72 12 163 9.5E-44 T 22-04-2016 R615_RS04295 112cf4ada21ce10b09e2120ad0d3709e 173 SUPERFAMILY SSF53927 9 161 3.68E-52 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 R615_RS04295 112cf4ada21ce10b09e2120ad0d3709e 173 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 98 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 R615_RS04295 112cf4ada21ce10b09e2120ad0d3709e 173 Gene3D G3DSA:3.40.140.10 9 154 7.9E-54 T 22-04-2016 R615_RS04295 112cf4ada21ce10b09e2120ad0d3709e 173 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 16 157 43.845 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 R615_RS04295 112cf4ada21ce10b09e2120ad0d3709e 173 PANTHER PTHR11079 12 163 9.5E-44 T 22-04-2016 R615_RS04295 112cf4ada21ce10b09e2120ad0d3709e 173 Pfam PF14437 MafB19-like deaminase 11 155 9.5E-31 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 R615_RS03400 9321471a4903261f32a76dd15a570681 1210 PANTHER PTHR11365:SF2 8 1210 0.0 T 22-04-2016 R615_RS03400 9321471a4903261f32a76dd15a570681 1210 Pfam PF01968 Hydantoinase/oxoprolinase 210 496 4.3E-109 T 22-04-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 R615_RS03400 9321471a4903261f32a76dd15a570681 1210 Pfam PF02538 Hydantoinase B/oxoprolinase 694 1208 3.1E-185 T 22-04-2016 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 R615_RS03400 9321471a4903261f32a76dd15a570681 1210 PANTHER PTHR11365 8 1210 0.0 T 22-04-2016 R615_RS03400 9321471a4903261f32a76dd15a570681 1210 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 15 190 5.6E-50 T 22-04-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal R615_RS10335 a25e3f60d0de76c985d6866cf1d17466 279 Pfam PF00578 AhpC/TSA family 121 252 3.6E-18 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 R615_RS10335 a25e3f60d0de76c985d6866cf1d17466 279 Gene3D G3DSA:3.40.30.10 121 255 4.4E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS10335 a25e3f60d0de76c985d6866cf1d17466 279 PANTHER PTHR10681 116 267 2.9E-18 T 22-04-2016 R615_RS10335 a25e3f60d0de76c985d6866cf1d17466 279 PANTHER PTHR10681:SF70 116 267 2.9E-18 T 22-04-2016 R615_RS10335 a25e3f60d0de76c985d6866cf1d17466 279 SUPERFAMILY SSF52833 120 273 4.23E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS16275 1a20ed47cc3f2ca388c8342f9f6e454d 545 PANTHER PTHR24096 5 541 8.8E-213 T 22-04-2016 R615_RS16275 1a20ed47cc3f2ca388c8342f9f6e454d 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 22-04-2016 IPR020845 AMP-binding, conserved site R615_RS16275 1a20ed47cc3f2ca388c8342f9f6e454d 545 Gene3D G3DSA:2.30.38.10 360 438 6.7E-15 T 22-04-2016 R615_RS16275 1a20ed47cc3f2ca388c8342f9f6e454d 545 Pfam PF00501 AMP-binding enzyme 35 444 5.4E-88 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 R615_RS16275 1a20ed47cc3f2ca388c8342f9f6e454d 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 528 1.2E-15 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain R615_RS16275 1a20ed47cc3f2ca388c8342f9f6e454d 545 PANTHER PTHR24096:SF53 5 541 8.8E-213 T 22-04-2016 R615_RS16275 1a20ed47cc3f2ca388c8342f9f6e454d 545 SUPERFAMILY SSF56801 9 541 2.22E-131 T 22-04-2016 R615_RS16275 1a20ed47cc3f2ca388c8342f9f6e454d 545 Gene3D G3DSA:3.40.50.980 188 342 3.3E-32 T 22-04-2016 R615_RS16275 1a20ed47cc3f2ca388c8342f9f6e454d 545 Gene3D G3DSA:3.30.300.30 439 538 8.5E-25 T 22-04-2016 R615_RS16275 1a20ed47cc3f2ca388c8342f9f6e454d 545 Gene3D G3DSA:3.40.50.980 12 187 3.5E-32 T 22-04-2016 R615_RS05730 b9de9ef1d2660b49968426f47e280692 132 SUPERFAMILY SSF54637 2 120 8.95E-12 T 22-04-2016 IPR029069 HotDog domain R615_RS05730 b9de9ef1d2660b49968426f47e280692 132 Gene3D G3DSA:3.10.129.10 2 98 1.1E-9 T 22-04-2016 IPR029069 HotDog domain R615_RS11905 2739c784fc89141708bb87650278d565 295 Gene3D G3DSA:3.40.1130.10 78 189 7.2E-7 T 22-04-2016 R615_RS11905 2739c784fc89141708bb87650278d565 295 PANTHER PTHR10983 1 293 1.8E-119 T 22-04-2016 R615_RS11905 2739c784fc89141708bb87650278d565 295 Pfam PF01553 Acyltransferase 78 226 6.2E-15 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS11905 2739c784fc89141708bb87650278d565 295 PANTHER PTHR10983:SF15 1 293 1.8E-119 T 22-04-2016 R615_RS11905 2739c784fc89141708bb87650278d565 295 SMART SM00563 85 227 2.1E-18 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS11905 2739c784fc89141708bb87650278d565 295 SUPERFAMILY SSF69593 11 287 1.44E-37 T 22-04-2016 R615_RS09090 89f49f0178ff273de3a04e5b5fc715d7 77 PANTHER PTHR20863 4 73 3.0E-27 T 22-04-2016 R615_RS09090 89f49f0178ff273de3a04e5b5fc715d7 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 7.0E-11 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 R615_RS09090 89f49f0178ff273de3a04e5b5fc715d7 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 74 2.8E-34 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 R615_RS09090 89f49f0178ff273de3a04e5b5fc715d7 77 PANTHER PTHR20863:SF28 4 73 3.0E-27 T 22-04-2016 R615_RS09090 89f49f0178ff273de3a04e5b5fc715d7 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site R615_RS09090 89f49f0178ff273de3a04e5b5fc715d7 77 Gene3D G3DSA:1.10.1200.10 3 75 2.3E-33 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain R615_RS09090 89f49f0178ff273de3a04e5b5fc715d7 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 9.8E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain R615_RS09090 89f49f0178ff273de3a04e5b5fc715d7 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.533 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 R615_RS09090 89f49f0178ff273de3a04e5b5fc715d7 77 SUPERFAMILY SSF47336 2 76 1.57E-22 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain R615_RS03395 4fab3a01fa900e1b4e7114a653755077 221 SUPERFAMILY SSF46626 144 220 3.15E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS03395 4fab3a01fa900e1b4e7114a653755077 221 SUPERFAMILY SSF46626 55 129 1.59E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS03395 4fab3a01fa900e1b4e7114a653755077 221 Gene3D G3DSA:1.10.760.10 144 220 3.1E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS03395 4fab3a01fa900e1b4e7114a653755077 221 PANTHER PTHR33751:SF3 45 221 7.0E-21 T 22-04-2016 R615_RS03395 4fab3a01fa900e1b4e7114a653755077 221 PANTHER PTHR33751 45 221 7.0E-21 T 22-04-2016 R615_RS03395 4fab3a01fa900e1b4e7114a653755077 221 Gene3D G3DSA:1.10.760.10 53 129 2.2E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS03395 4fab3a01fa900e1b4e7114a653755077 221 Pfam PF00034 Cytochrome c 144 220 3.4E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00620 62fc30599761c7742e74117dd2b329bf 495 PANTHER PTHR11814 6 489 2.2E-282 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 R615_RS00620 62fc30599761c7742e74117dd2b329bf 495 SUPERFAMILY SSF52091 398 484 1.49E-11 T 22-04-2016 IPR002645 STAS domain R615_RS00620 62fc30599761c7742e74117dd2b329bf 495 Pfam PF01740 STAS domain 399 486 3.0E-10 T 22-04-2016 IPR002645 STAS domain R615_RS00620 62fc30599761c7742e74117dd2b329bf 495 Pfam PF00916 Sulfate permease family 14 344 2.7E-51 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 R615_RS00620 62fc30599761c7742e74117dd2b329bf 495 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 22-04-2016 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 R615_RS00620 62fc30599761c7742e74117dd2b329bf 495 PANTHER PTHR11814:SF76 6 489 2.2E-282 T 22-04-2016 R615_RS00620 62fc30599761c7742e74117dd2b329bf 495 Gene3D G3DSA:3.30.750.24 398 483 1.1E-7 T 22-04-2016 IPR002645 STAS domain R615_RS06235 d2532f720d2c202861abf061303d4aa2 347 Gene3D G3DSA:3.90.25.10 273 346 9.9E-47 T 22-04-2016 R615_RS06235 d2532f720d2c202861abf061303d4aa2 347 Gene3D G3DSA:3.90.25.10 186 238 9.9E-47 T 22-04-2016 R615_RS06235 d2532f720d2c202861abf061303d4aa2 347 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 344 3.6E-130 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 R615_RS06235 d2532f720d2c202861abf061303d4aa2 347 PRINTS PR01713 Nucleotide sugar epimerase signature 237 252 6.3E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 R615_RS06235 d2532f720d2c202861abf061303d4aa2 347 PRINTS PR01713 Nucleotide sugar epimerase signature 304 321 6.3E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 R615_RS06235 d2532f720d2c202861abf061303d4aa2 347 PRINTS PR01713 Nucleotide sugar epimerase signature 265 280 6.3E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 R615_RS06235 d2532f720d2c202861abf061303d4aa2 347 Gene3D G3DSA:3.40.50.720 1 185 8.1E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06235 d2532f720d2c202861abf061303d4aa2 347 PANTHER PTHR10366 3 345 6.5E-148 T 22-04-2016 R615_RS06235 d2532f720d2c202861abf061303d4aa2 347 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 333 3.7E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06235 d2532f720d2c202861abf061303d4aa2 347 SUPERFAMILY SSF51735 1 345 2.45E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06235 d2532f720d2c202861abf061303d4aa2 347 PANTHER PTHR10366:SF39 3 345 6.5E-148 T 22-04-2016 R615_RS07865 fe7041768046e73f37d71f2e15be4a40 258 PANTHER PTHR30413:SF2 4 258 6.3E-142 T 22-04-2016 R615_RS07865 fe7041768046e73f37d71f2e15be4a40 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 198 217 9.4E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 R615_RS07865 fe7041768046e73f37d71f2e15be4a40 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 140 164 9.4E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 R615_RS07865 fe7041768046e73f37d71f2e15be4a40 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 178 197 9.4E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 R615_RS07865 fe7041768046e73f37d71f2e15be4a40 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 104 129 9.4E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 R615_RS07865 fe7041768046e73f37d71f2e15be4a40 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 60 82 9.4E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 R615_RS07865 fe7041768046e73f37d71f2e15be4a40 258 PANTHER PTHR30413 4 258 6.3E-142 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 R615_RS07865 fe7041768046e73f37d71f2e15be4a40 258 Pfam PF01061 ABC-2 type transporter 11 219 3.1E-36 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 R615_RS07865 fe7041768046e73f37d71f2e15be4a40 258 PIRSF PIRSF006648 1 255 2.0E-22 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 R615_RS08860 22d6407ab0f0cec118bbcedf8f8fb7aa 339 SUPERFAMILY SSF111369 107 259 2.35E-11 T 22-04-2016 R615_RS08860 22d6407ab0f0cec118bbcedf8f8fb7aa 339 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 148 253 7.8E-21 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain R615_RS08860 22d6407ab0f0cec118bbcedf8f8fb7aa 339 PANTHER PTHR30097 26 339 4.1E-56 T 22-04-2016 R615_RS08860 22d6407ab0f0cec118bbcedf8f8fb7aa 339 PANTHER PTHR30097:SF4 26 339 4.1E-56 T 22-04-2016 R615_RS08860 22d6407ab0f0cec118bbcedf8f8fb7aa 339 Gene3D G3DSA:2.40.50.100 107 179 4.6E-11 T 22-04-2016 R615_RS16420 1a9793f8aa9bcdc435a3432c33641228 436 Gene3D G3DSA:3.40.50.2300 149 341 1.4E-72 T 22-04-2016 R615_RS16420 1a9793f8aa9bcdc435a3432c33641228 436 PANTHER PTHR30483:SF8 6 415 1.8E-198 T 22-04-2016 R615_RS16420 1a9793f8aa9bcdc435a3432c33641228 436 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 34 398 3.1E-174 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA R615_RS16420 1a9793f8aa9bcdc435a3432c33641228 436 Gene3D G3DSA:3.40.50.2300 31 124 9.8E-4 T 22-04-2016 R615_RS16420 1a9793f8aa9bcdc435a3432c33641228 436 Pfam PF13433 Periplasmic binding protein domain 34 402 2.0E-173 T 22-04-2016 R615_RS16420 1a9793f8aa9bcdc435a3432c33641228 436 SUPERFAMILY SSF53822 33 406 5.76E-87 T 22-04-2016 IPR028082 Periplasmic binding protein-like I R615_RS16420 1a9793f8aa9bcdc435a3432c33641228 436 PANTHER PTHR30483 6 415 1.8E-198 T 22-04-2016 R615_RS00910 cd34678485024f053813ec639e097496 301 SUPERFAMILY SSF53633 7 297 7.85E-96 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS00910 cd34678485024f053813ec639e097496 301 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 272 3.5E-78 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS00910 cd34678485024f053813ec639e097496 301 Hamap MF_00082_B Acetylglutamate kinase [argB]. 26 297 37.047 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS00910 cd34678485024f053813ec639e097496 301 Pfam PF00696 Amino acid kinase family 28 274 3.6E-42 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS00910 cd34678485024f053813ec639e097496 301 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 6.9E-9 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 R615_RS00910 cd34678485024f053813ec639e097496 301 PRINTS PR00474 Glutamate 5-kinase family signature 197 224 6.9E-9 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 R615_RS00910 cd34678485024f053813ec639e097496 301 PRINTS PR00474 Glutamate 5-kinase family signature 247 267 6.9E-9 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 R615_RS00910 cd34678485024f053813ec639e097496 301 Gene3D G3DSA:3.40.1160.10 27 296 4.1E-103 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 R615_RS00910 cd34678485024f053813ec639e097496 301 PANTHER PTHR23342 3 297 5.8E-117 T 22-04-2016 R615_RS00910 cd34678485024f053813ec639e097496 301 PIRSF PIRSF000728 13 297 7.7E-108 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS09590 3454096465b043df40c2ddc22570c65a 320 PANTHER PTHR34351:SF1 9 320 3.9E-56 T 22-04-2016 R615_RS09590 3454096465b043df40c2ddc22570c65a 320 PANTHER PTHR34351 9 320 3.9E-56 T 22-04-2016 R615_RS09590 3454096465b043df40c2ddc22570c65a 320 Pfam PF01882 Protein of unknown function DUF58 213 289 1.2E-15 T 22-04-2016 IPR002881 Domain of unknown function DUF58 R615_RS00830 19cf11e6d5ae7b49b015ee3a787efc64 467 Gene3D G3DSA:1.10.3150.10 177 456 4.5E-74 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS00830 19cf11e6d5ae7b49b015ee3a787efc64 467 PANTHER PTHR33525 177 467 3.5E-65 T 22-04-2016 R615_RS00830 19cf11e6d5ae7b49b015ee3a787efc64 467 Gene3D G3DSA:3.90.960.10 47 145 6.9E-5 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 R615_RS00830 19cf11e6d5ae7b49b015ee3a787efc64 467 Pfam PF08668 HDOD domain 194 394 1.0E-47 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS00830 19cf11e6d5ae7b49b015ee3a787efc64 467 PIRSF PIRSF036888 2 465 5.3E-135 T 22-04-2016 IPR014627 Uncharacterised conserved protein UCP036888, signal transduction HD-GYP-like, PA5346 type R615_RS00830 19cf11e6d5ae7b49b015ee3a787efc64 467 PANTHER PTHR33525:SF3 177 467 3.5E-65 T 22-04-2016 R615_RS00830 19cf11e6d5ae7b49b015ee3a787efc64 467 SUPERFAMILY SSF55826 9 145 2.09E-6 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 R615_RS00830 19cf11e6d5ae7b49b015ee3a787efc64 467 Pfam PF04073 Aminoacyl-tRNA editing domain 41 140 4.7E-5 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 R615_RS00830 19cf11e6d5ae7b49b015ee3a787efc64 467 SUPERFAMILY SSF109604 179 456 4.08E-62 T 22-04-2016 R615_RS06405 a93979795b39c9eca5887935e3e942f8 230 Pfam PF00005 ABC transporter 25 157 4.9E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS06405 a93979795b39c9eca5887935e3e942f8 230 PANTHER PTHR24220 4 209 8.6E-43 T 22-04-2016 R615_RS06405 a93979795b39c9eca5887935e3e942f8 230 SMART SM00382 34 203 1.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS06405 a93979795b39c9eca5887935e3e942f8 230 SUPERFAMILY SSF52540 7 213 5.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06405 a93979795b39c9eca5887935e3e942f8 230 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS06405 a93979795b39c9eca5887935e3e942f8 230 Gene3D G3DSA:3.40.50.300 7 213 5.4E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07015 62de1cd94044441a73766852417816ef 392 PANTHER PTHR13847 18 354 2.3E-34 T 22-04-2016 R615_RS07015 62de1cd94044441a73766852417816ef 392 Pfam PF01266 FAD dependent oxidoreductase 19 354 1.5E-28 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 R615_RS07015 62de1cd94044441a73766852417816ef 392 Gene3D G3DSA:3.30.9.10 187 324 2.6E-18 T 22-04-2016 R615_RS07015 62de1cd94044441a73766852417816ef 392 SUPERFAMILY SSF51905 18 310 2.85E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS07015 62de1cd94044441a73766852417816ef 392 Gene3D G3DSA:3.50.50.60 163 186 1.6E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS07015 62de1cd94044441a73766852417816ef 392 Gene3D G3DSA:3.50.50.60 16 91 1.6E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS07015 62de1cd94044441a73766852417816ef 392 PANTHER PTHR13847:SF180 18 354 2.3E-34 T 22-04-2016 R615_RS10775 9041c340e191d37d0176a93a1a3d92d1 453 Pfam PF07394 Protein of unknown function (DUF1501) 34 393 4.2E-23 T 22-04-2016 IPR010869 Protein of unknown function DUF1501 R615_RS16145 69907fec9a8b11ce13bf64c818ea2d49 324 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 3 324 8.0E-103 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS16145 69907fec9a8b11ce13bf64c818ea2d49 324 Gene3D G3DSA:3.20.20.70 3 284 1.5E-70 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS16145 69907fec9a8b11ce13bf64c818ea2d49 324 Pfam PF13353 4Fe-4S single cluster domain 20 121 8.4E-9 T 22-04-2016 R615_RS16145 69907fec9a8b11ce13bf64c818ea2d49 324 Pfam PF04055 Radical SAM superfamily 17 177 4.7E-26 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 R615_RS16145 69907fec9a8b11ce13bf64c818ea2d49 324 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 18 29 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS16145 69907fec9a8b11ce13bf64c818ea2d49 324 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 3 324 36.006 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS16145 69907fec9a8b11ce13bf64c818ea2d49 324 PANTHER PTHR22960 1 280 6.7E-118 T 22-04-2016 R615_RS16145 69907fec9a8b11ce13bf64c818ea2d49 324 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 307 2.4E-34 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS16145 69907fec9a8b11ce13bf64c818ea2d49 324 SUPERFAMILY SSF102114 3 277 1.12E-69 T 22-04-2016 R615_RS16145 69907fec9a8b11ce13bf64c818ea2d49 324 SMART SM00729 12 215 2.9E-7 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 R615_RS14595 3adec3d99fab7005ded8a9f5fff0f7b0 320 Pfam PF00561 alpha/beta hydrolase fold 58 164 5.9E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14595 3adec3d99fab7005ded8a9f5fff0f7b0 320 Gene3D G3DSA:3.40.50.1820 23 301 2.2E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS14595 3adec3d99fab7005ded8a9f5fff0f7b0 320 PANTHER PTHR10992 35 302 3.6E-54 T 22-04-2016 R615_RS14595 3adec3d99fab7005ded8a9f5fff0f7b0 320 SUPERFAMILY SSF53474 19 302 2.64E-63 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS14595 3adec3d99fab7005ded8a9f5fff0f7b0 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 246 260 9.7E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14595 3adec3d99fab7005ded8a9f5fff0f7b0 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 9.7E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14595 3adec3d99fab7005ded8a9f5fff0f7b0 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 98 9.7E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14595 3adec3d99fab7005ded8a9f5fff0f7b0 320 PRINTS PR00111 Alpha/beta hydrolase fold signature 128 141 9.7E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS07590 1edd43e553e82c887253e01c0c5513f3 319 PANTHER PTHR34580 1 317 1.5E-47 T 22-04-2016 R615_RS07590 1edd43e553e82c887253e01c0c5513f3 319 Pfam PF13280 WYL domain 144 315 1.1E-33 T 22-04-2016 IPR026881 WYL domain R615_RS07590 1edd43e553e82c887253e01c0c5513f3 319 PANTHER PTHR34580:SF3 1 317 1.5E-47 T 22-04-2016 R615_RS11740 b2789d6909e80f09183918596512f1e0 649 Gene3D G3DSA:2.30.38.10 440 516 3.7E-7 T 22-04-2016 R615_RS11740 b2789d6909e80f09183918596512f1e0 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.825 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 R615_RS11740 b2789d6909e80f09183918596512f1e0 649 Gene3D G3DSA:3.30.300.30 519 642 1.6E-28 T 22-04-2016 R615_RS11740 b2789d6909e80f09183918596512f1e0 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 R615_RS11740 b2789d6909e80f09183918596512f1e0 649 PANTHER PTHR24095 12 646 0.0 T 22-04-2016 R615_RS11740 b2789d6909e80f09183918596512f1e0 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 262 273 - T 22-04-2016 IPR020845 AMP-binding, conserved site R615_RS11740 b2789d6909e80f09183918596512f1e0 649 Pfam PF00501 AMP-binding enzyme 84 523 8.6E-89 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 R615_RS11740 b2789d6909e80f09183918596512f1e0 649 Gene3D G3DSA:3.40.50.980 268 428 8.1E-26 T 22-04-2016 R615_RS11740 b2789d6909e80f09183918596512f1e0 649 SUPERFAMILY SSF56801 14 644 7.59E-186 T 22-04-2016 R615_RS11740 b2789d6909e80f09183918596512f1e0 649 Gene3D G3DSA:3.40.50.980 81 267 5.6E-47 T 22-04-2016 R615_RS11740 b2789d6909e80f09183918596512f1e0 649 PANTHER PTHR24095:SF178 12 646 0.0 T 22-04-2016 R615_RS11740 b2789d6909e80f09183918596512f1e0 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 82 6.2E-20 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 R615_RS11740 b2789d6909e80f09183918596512f1e0 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 1.5E-24 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain R615_RS11090 e8a27cf69959c6855b796e373c46eac6 119 PANTHER PTHR33215 8 113 3.1E-16 T 22-04-2016 R615_RS11090 e8a27cf69959c6855b796e373c46eac6 119 Pfam PF01527 Transposase 11 94 2.0E-15 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 R615_RS11090 e8a27cf69959c6855b796e373c46eac6 119 Gene3D G3DSA:1.10.10.60 14 101 3.1E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS11090 e8a27cf69959c6855b796e373c46eac6 119 SUPERFAMILY SSF46689 10 107 9.85E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS00705 0e2a57d9a80c59b296ac12c482e5380c 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 160 7.0E-23 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component R615_RS00705 0e2a57d9a80c59b296ac12c482e5380c 170 PANTHER PTHR35011 4 161 7.5E-26 T 22-04-2016 R615_RS00705 0e2a57d9a80c59b296ac12c482e5380c 170 PANTHER PTHR35011:SF4 4 161 7.5E-26 T 22-04-2016 R615_RS03545 5f5c370ecfe346b6f4b976f13ebd9068 420 Pfam PF01593 Flavin containing amine oxidoreductase 12 287 3.3E-22 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 R615_RS03545 5f5c370ecfe346b6f4b976f13ebd9068 420 Gene3D G3DSA:3.50.50.60 203 303 9.5E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS03545 5f5c370ecfe346b6f4b976f13ebd9068 420 Gene3D G3DSA:3.50.50.60 2 95 9.5E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS03545 5f5c370ecfe346b6f4b976f13ebd9068 420 Gene3D G3DSA:3.50.50.60 152 162 9.5E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS03545 5f5c370ecfe346b6f4b976f13ebd9068 420 SUPERFAMILY SSF51905 384 414 7.03E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS03545 5f5c370ecfe346b6f4b976f13ebd9068 420 SUPERFAMILY SSF51905 3 303 7.03E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS03545 5f5c370ecfe346b6f4b976f13ebd9068 420 PANTHER PTHR10742:SF275 3 419 4.5E-189 T 22-04-2016 R615_RS03545 5f5c370ecfe346b6f4b976f13ebd9068 420 PANTHER PTHR10742 3 419 4.5E-189 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 Gene3D G3DSA:3.50.50.60 138 322 2.2E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PIRSF PIRSF000350 1 443 3.8E-87 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 SUPERFAMILY SSF55424 334 447 1.17E-31 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PANTHER PTHR22912 1 450 2.5E-194 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 Gene3D G3DSA:3.50.50.60 2 137 6.4E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 337 446 1.7E-31 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 333 354 4.1E-69 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.1E-69 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 4.1E-69 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 4.1E-69 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 4.1E-69 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 4.1E-69 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 4.1E-69 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 4.1E-69 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 4.1E-69 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 317 9.7E-72 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 SUPERFAMILY SSF51905 1 358 3.33E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 Gene3D G3DSA:3.30.390.30 336 451 2.6E-41 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 6.7E-30 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 6.7E-30 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 6.7E-30 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 6.7E-30 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 6.7E-30 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 PANTHER PTHR22912:SF106 1 450 2.5E-194 T 22-04-2016 R615_RS08655 2701f5545104077cad5916ed74eed50b 453 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 R615_RS05475 d706fe3c2db7c7e458625fee2ed6d696 324 SUPERFAMILY SSF53850 25 239 4.08E-43 T 22-04-2016 R615_RS05475 d706fe3c2db7c7e458625fee2ed6d696 324 Pfam PF09084 NMT1/THI5 like 42 237 3.2E-19 T 22-04-2016 IPR015168 SsuA/THI5-like R615_RS05475 d706fe3c2db7c7e458625fee2ed6d696 324 SMART SM00062 26 240 0.0019 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF R615_RS05475 d706fe3c2db7c7e458625fee2ed6d696 324 PANTHER PTHR30024:SF8 29 284 2.0E-43 T 22-04-2016 R615_RS05475 d706fe3c2db7c7e458625fee2ed6d696 324 Gene3D G3DSA:3.40.190.10 126 214 7.1E-20 T 22-04-2016 R615_RS05475 d706fe3c2db7c7e458625fee2ed6d696 324 PANTHER PTHR30024 29 284 2.0E-43 T 22-04-2016 R615_RS05475 d706fe3c2db7c7e458625fee2ed6d696 324 Gene3D G3DSA:3.40.190.10 42 125 1.9E-4 T 22-04-2016 R615_RS10720 1441fba27f4b3dd1dc729511bdd33120 282 Gene3D G3DSA:3.40.50.150 1 274 1.7E-100 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS10720 1441fba27f4b3dd1dc729511bdd33120 282 PANTHER PTHR37426 2 282 2.9E-109 T 22-04-2016 R615_RS10720 1441fba27f4b3dd1dc729511bdd33120 282 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 1.6E-73 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 R615_RS10720 1441fba27f4b3dd1dc729511bdd33120 282 SUPERFAMILY SSF53335 9 273 1.13E-84 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS10720 1441fba27f4b3dd1dc729511bdd33120 282 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 270 39.425 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 R615_RS10720 1441fba27f4b3dd1dc729511bdd33120 282 PANTHER PTHR37426:SF1 2 282 2.9E-109 T 22-04-2016 R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 540 2.0E-39 T 22-04-2016 IPR000160 GGDEF domain R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 PANTHER PTHR10799:SF774 409 650 1.9E-62 T 22-04-2016 R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 PANTHER PTHR10799:SF774 7 17 1.9E-62 T 22-04-2016 R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 SMART SM00267 365 542 1.1E-55 T 22-04-2016 IPR000160 GGDEF domain R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 Pfam PF00990 Diguanylate cyclase, GGDEF domain 376 537 5.4E-45 T 22-04-2016 IPR000160 GGDEF domain R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 PANTHER PTHR10799 409 650 1.9E-62 T 22-04-2016 R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 PANTHER PTHR10799 7 17 1.9E-62 T 22-04-2016 R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 SUPERFAMILY SSF55073 381 544 1.14E-44 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 Gene3D G3DSA:3.30.70.270 378 550 3.4E-53 T 22-04-2016 R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 SMART SM00052 552 799 2.5E-92 T 22-04-2016 IPR001633 EAL domain R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 Gene3D G3DSA:3.20.20.450 556 807 2.1E-84 T 22-04-2016 IPR001633 EAL domain R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 SUPERFAMILY SSF141868 558 807 3.4E-82 T 22-04-2016 IPR001633 EAL domain R615_RS17755 9df4ff242287228cc1d5304ca3b99373 813 Pfam PF00563 EAL domain 559 794 6.8E-66 T 22-04-2016 IPR001633 EAL domain R615_RS10865 bf782690753069925031cbfe6a673540 354 PANTHER PTHR33529:SF1 1 353 6.4E-100 T 22-04-2016 R615_RS10865 bf782690753069925031cbfe6a673540 354 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 352 3.3E-118 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 R615_RS10865 bf782690753069925031cbfe6a673540 354 PANTHER PTHR33529 1 353 6.4E-100 T 22-04-2016 R615_RS10865 bf782690753069925031cbfe6a673540 354 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 352 7.2E-59 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 R615_RS08955 7c656644808829a2dbb40beec552fcda 312 SUPERFAMILY SSF161111 22 238 2.22E-51 T 22-04-2016 R615_RS08955 7c656644808829a2dbb40beec552fcda 312 PANTHER PTHR11562 9 310 1.1E-157 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS08955 7c656644808829a2dbb40beec552fcda 312 Gene3D G3DSA:1.20.1510.10 24 237 4.1E-52 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain R615_RS08955 7c656644808829a2dbb40beec552fcda 312 PANTHER PTHR11562:SF40 9 310 1.1E-157 T 22-04-2016 R615_RS08955 7c656644808829a2dbb40beec552fcda 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 310 2.1E-65 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS08955 7c656644808829a2dbb40beec552fcda 312 Pfam PF01545 Cation efflux family 30 237 9.2E-43 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS01010 11ced64dfad42ddac2a9d5269197f792 226 SUPERFAMILY SSF48498 83 166 6.67E-9 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal R615_RS01010 11ced64dfad42ddac2a9d5269197f792 226 Gene3D G3DSA:1.10.357.10 4 185 1.4E-19 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS01010 11ced64dfad42ddac2a9d5269197f792 226 SUPERFAMILY SSF46689 5 79 1.74E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 PANTHER PTHR24422 15 286 5.0E-71 T 22-04-2016 R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 SMART SM00138 18 283 3.7E-66 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 SUPERFAMILY SSF53335 88 276 3.18E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 Gene3D G3DSA:1.10.155.10 12 85 1.4E-14 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 PANTHER PTHR24422:SF13 15 286 5.0E-71 T 22-04-2016 R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 PRINTS PR00996 Glutamate methyltransferase family signature 80 92 8.5E-30 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 PRINTS PR00996 Glutamate methyltransferase family signature 120 140 8.5E-30 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 PRINTS PR00996 Glutamate methyltransferase family signature 154 170 8.5E-30 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 PRINTS PR00996 Glutamate methyltransferase family signature 223 237 8.5E-30 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 PRINTS PR00996 Glutamate methyltransferase family signature 242 265 8.5E-30 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 PRINTS PR00996 Glutamate methyltransferase family signature 40 53 8.5E-30 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 Pfam PF03705 CheR methyltransferase, all-alpha domain 21 71 8.3E-8 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 Pfam PF01739 CheR methyltransferase, SAM binding domain 87 275 2.1E-46 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 Gene3D G3DSA:3.40.50.150 86 278 1.1E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS01240 84c4de921b4464db2bb7dc25d1c2b989 297 SUPERFAMILY SSF47757 10 86 1.02E-11 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal R615_RS12020 b1a34ae6a216404cd055153aa81652b1 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 8 141 8.1E-14 T 22-04-2016 IPR018639 Domain of unknown function DUF2062 R615_RS12020 b1a34ae6a216404cd055153aa81652b1 169 TIGRFAM TIGR03546 TIGR03546: TIGR03546 family protein 4 156 8.8E-48 T 22-04-2016 IPR019935 Conserved hypothetical protein CHP03546 R615_RS12865 247018dc7808f3bae5397596eca46185 287 PANTHER PTHR11614:SF82 4 249 5.7E-25 T 22-04-2016 R615_RS12865 247018dc7808f3bae5397596eca46185 287 PANTHER PTHR11614 4 249 5.7E-25 T 22-04-2016 R615_RS12865 247018dc7808f3bae5397596eca46185 287 Pfam PF12146 Serine aminopeptidase, S33 46 150 8.6E-12 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 R615_RS12865 247018dc7808f3bae5397596eca46185 287 Gene3D G3DSA:3.40.50.1820 9 280 2.2E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS12865 247018dc7808f3bae5397596eca46185 287 PIRSF PIRSF037442 4 286 1.8E-88 T 22-04-2016 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 R615_RS12865 247018dc7808f3bae5397596eca46185 287 SUPERFAMILY SSF53474 3 267 1.54E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS06760 886e7e13b7642a00a8b417234c69bd90 298 Gene3D G3DSA:3.40.190.10 176 262 1.4E-21 T 22-04-2016 R615_RS06760 886e7e13b7642a00a8b417234c69bd90 298 PANTHER PTHR30537 1 297 3.4E-109 T 22-04-2016 R615_RS06760 886e7e13b7642a00a8b417234c69bd90 298 SUPERFAMILY SSF46785 4 88 4.82E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS06760 886e7e13b7642a00a8b417234c69bd90 298 SUPERFAMILY SSF53850 89 296 3.8E-47 T 22-04-2016 R615_RS06760 886e7e13b7642a00a8b417234c69bd90 298 Gene3D G3DSA:3.40.190.10 92 175 2.6E-24 T 22-04-2016 R615_RS06760 886e7e13b7642a00a8b417234c69bd90 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.5E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS06760 886e7e13b7642a00a8b417234c69bd90 298 PANTHER PTHR30537:SF5 1 297 3.4E-109 T 22-04-2016 R615_RS06760 886e7e13b7642a00a8b417234c69bd90 298 Gene3D G3DSA:1.10.10.10 4 87 6.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS06760 886e7e13b7642a00a8b417234c69bd90 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS06760 886e7e13b7642a00a8b417234c69bd90 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS06760 886e7e13b7642a00a8b417234c69bd90 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS06760 886e7e13b7642a00a8b417234c69bd90 298 Pfam PF03466 LysR substrate binding domain 89 294 1.1E-48 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 8.0E-49 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 PANTHER PTHR21089:SF3 270 357 4.4E-125 T 22-04-2016 R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 PANTHER PTHR21089:SF3 16 254 4.4E-125 T 22-04-2016 R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 SUPERFAMILY SSF69742 1 156 1.44E-47 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 SUPERFAMILY SSF51735 160 313 3.11E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 Gene3D G3DSA:1.10.1200.70 332 388 1.9E-5 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 SUPERFAMILY SSF69075 315 416 5.1E-27 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 5.2E-49 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 Gene3D G3DSA:3.40.50.720 161 309 4.6E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 415 7.4E-24 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.655 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 1.7E-142 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 PIRSF PIRSF000445 1 424 3.6E-155 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 PANTHER PTHR21089 270 357 4.4E-125 T 22-04-2016 R615_RS12960 4d12e636f0d36f00561a1e935ba2e684 425 PANTHER PTHR21089 16 254 4.4E-125 T 22-04-2016 R615_RS02515 032d2d0280e8780365b3379e631fd98c 247 Gene3D G3DSA:3.40.50.1000 9 239 1.5E-21 T 22-04-2016 IPR023214 HAD-like domain R615_RS02515 032d2d0280e8780365b3379e631fd98c 247 PANTHER PTHR20371 8 241 8.2E-97 T 22-04-2016 R615_RS02515 032d2d0280e8780365b3379e631fd98c 247 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 10 236 1.2E-78 T 22-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 R615_RS02515 032d2d0280e8780365b3379e631fd98c 247 SUPERFAMILY SSF56784 8 239 1.78E-56 T 22-04-2016 IPR023214 HAD-like domain R615_RS02515 032d2d0280e8780365b3379e631fd98c 247 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 8 239 40.368 T 22-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 R615_RS04060 88105a5d918db4139f51a05e2594e2d9 305 PIRSF PIRSF006621 1 305 7.7E-69 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 R615_RS04060 88105a5d918db4139f51a05e2594e2d9 305 PANTHER PTHR11082:SF26 1 303 7.6E-118 T 22-04-2016 R615_RS04060 88105a5d918db4139f51a05e2594e2d9 305 Pfam PF01207 Dihydrouridine synthase (Dus) 1 296 6.7E-70 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 R615_RS04060 88105a5d918db4139f51a05e2594e2d9 305 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 1 302 47.627 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 R615_RS04060 88105a5d918db4139f51a05e2594e2d9 305 SUPERFAMILY SSF51395 1 302 3.3E-60 T 22-04-2016 R615_RS04060 88105a5d918db4139f51a05e2594e2d9 305 Gene3D G3DSA:3.20.20.70 1 232 3.9E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS04060 88105a5d918db4139f51a05e2594e2d9 305 PANTHER PTHR11082 1 303 7.6E-118 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 R615_RS04060 88105a5d918db4139f51a05e2594e2d9 305 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 85 103 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 R615_RS16265 59f267dab728cfd5c761aab41152e82e 189 PANTHER PTHR33164 5 176 1.9E-25 T 22-04-2016 R615_RS16265 59f267dab728cfd5c761aab41152e82e 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 92 1.0E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS16265 59f267dab728cfd5c761aab41152e82e 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 108 1.0E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS16265 59f267dab728cfd5c761aab41152e82e 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 128 1.0E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS16265 59f267dab728cfd5c761aab41152e82e 189 Gene3D G3DSA:1.10.10.10 25 167 7.7E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS16265 59f267dab728cfd5c761aab41152e82e 189 SUPERFAMILY SSF46785 25 167 2.19E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS16265 59f267dab728cfd5c761aab41152e82e 189 SMART SM00347 52 152 1.0E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS16265 59f267dab728cfd5c761aab41152e82e 189 Pfam PF01047 MarR family 59 117 2.6E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 R615_RS15230 1d2b3f0ab403c15cb1e698fad61e06da 213 Gene3D G3DSA:3.30.1150.10 105 212 3.0E-17 T 22-04-2016 R615_RS15230 1d2b3f0ab403c15cb1e698fad61e06da 213 SUPERFAMILY SSF74653 126 209 1.09E-26 T 22-04-2016 R615_RS15230 1d2b3f0ab403c15cb1e698fad61e06da 213 PRINTS PR01374 Gram-negative bacterial tonB protein signature 150 168 6.9E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 R615_RS15230 1d2b3f0ab403c15cb1e698fad61e06da 213 PRINTS PR01374 Gram-negative bacterial tonB protein signature 169 186 6.9E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 R615_RS15230 1d2b3f0ab403c15cb1e698fad61e06da 213 PRINTS PR01374 Gram-negative bacterial tonB protein signature 129 150 6.9E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 R615_RS15230 1d2b3f0ab403c15cb1e698fad61e06da 213 PRINTS PR01374 Gram-negative bacterial tonB protein signature 60 70 6.9E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 R615_RS15230 1d2b3f0ab403c15cb1e698fad61e06da 213 PANTHER PTHR33446 117 212 4.0E-21 T 22-04-2016 R615_RS15230 1d2b3f0ab403c15cb1e698fad61e06da 213 PANTHER PTHR33446:SF1 117 212 4.0E-21 T 22-04-2016 R615_RS15230 1d2b3f0ab403c15cb1e698fad61e06da 213 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 135 212 4.6E-22 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 R615_RS15230 1d2b3f0ab403c15cb1e698fad61e06da 213 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 134 211 8.1E-24 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 R615_RS14365 01a431139d792affff44731e79d7e06c 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 5.4E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14365 01a431139d792affff44731e79d7e06c 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 227 241 5.4E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14365 01a431139d792affff44731e79d7e06c 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 5.4E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14365 01a431139d792affff44731e79d7e06c 288 SUPERFAMILY SSF53474 5 282 6.49E-73 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS14365 01a431139d792affff44731e79d7e06c 288 PRINTS PR00412 Epoxide hydrolase signature 96 109 3.1E-25 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 R615_RS14365 01a431139d792affff44731e79d7e06c 288 PRINTS PR00412 Epoxide hydrolase signature 50 65 3.1E-25 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 R615_RS14365 01a431139d792affff44731e79d7e06c 288 PRINTS PR00412 Epoxide hydrolase signature 258 280 3.1E-25 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 R615_RS14365 01a431139d792affff44731e79d7e06c 288 PRINTS PR00412 Epoxide hydrolase signature 30 48 3.1E-25 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 R615_RS14365 01a431139d792affff44731e79d7e06c 288 PRINTS PR00412 Epoxide hydrolase signature 225 241 3.1E-25 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 R615_RS14365 01a431139d792affff44731e79d7e06c 288 PANTHER PTHR10992 26 283 1.2E-66 T 22-04-2016 R615_RS14365 01a431139d792affff44731e79d7e06c 288 Gene3D G3DSA:3.40.50.1820 5 283 2.1E-78 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS14365 01a431139d792affff44731e79d7e06c 288 Pfam PF00561 alpha/beta hydrolase fold 25 134 1.3E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14365 01a431139d792affff44731e79d7e06c 288 PANTHER PTHR10992:SF793 26 283 1.2E-66 T 22-04-2016 R615_RS01130 bb8c57160f49a0091f3d0e500e22ccf1 196 Pfam PF04011 LemA family 5 196 3.3E-63 T 22-04-2016 IPR007156 LemA R615_RS01130 bb8c57160f49a0091f3d0e500e22ccf1 196 Gene3D G3DSA:1.20.1440.20 12 196 2.9E-60 T 22-04-2016 IPR023353 LemA-like domain R615_RS01130 bb8c57160f49a0091f3d0e500e22ccf1 196 PANTHER PTHR34478:SF2 1 196 1.0E-69 T 22-04-2016 R615_RS01130 bb8c57160f49a0091f3d0e500e22ccf1 196 PANTHER PTHR34478 1 196 1.0E-69 T 22-04-2016 R615_RS01130 bb8c57160f49a0091f3d0e500e22ccf1 196 SUPERFAMILY SSF140478 24 174 2.62E-51 T 22-04-2016 IPR023353 LemA-like domain R615_RS08590 f9a682f1baa07fbbef51d67eb1f7bd6d 546 PANTHER PTHR10617:SF107 1 470 7.9E-226 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 R615_RS08590 f9a682f1baa07fbbef51d67eb1f7bd6d 546 Gene3D G3DSA:3.50.50.60 6 282 4.8E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS08590 f9a682f1baa07fbbef51d67eb1f7bd6d 546 Gene3D G3DSA:3.30.70.20 490 532 3.5E-4 T 22-04-2016 R615_RS08590 f9a682f1baa07fbbef51d67eb1f7bd6d 546 PANTHER PTHR10617 1 470 7.9E-226 T 22-04-2016 R615_RS08590 f9a682f1baa07fbbef51d67eb1f7bd6d 546 SUPERFAMILY SSF54862 448 546 7.28E-29 T 22-04-2016 R615_RS08590 f9a682f1baa07fbbef51d67eb1f7bd6d 546 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 443 543 2.8E-48 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 R615_RS08590 f9a682f1baa07fbbef51d67eb1f7bd6d 546 SUPERFAMILY SSF54373 210 306 3.37E-34 T 22-04-2016 R615_RS08590 f9a682f1baa07fbbef51d67eb1f7bd6d 546 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 2.2E-6 T 22-04-2016 R615_RS08590 f9a682f1baa07fbbef51d67eb1f7bd6d 546 SUPERFAMILY SSF51905 307 445 1.52E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS08590 f9a682f1baa07fbbef51d67eb1f7bd6d 546 SUPERFAMILY SSF51905 3 209 1.52E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS12035 8ffec12e7b1fcbe41b8ea8aaa1b19125 372 SUPERFAMILY SSF111369 55 291 5.1E-76 T 22-04-2016 R615_RS12035 8ffec12e7b1fcbe41b8ea8aaa1b19125 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 368 3.2E-86 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 R615_RS12035 8ffec12e7b1fcbe41b8ea8aaa1b19125 372 Pfam PF00529 HlyD membrane-fusion protein of T1SS 200 353 1.2E-6 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 R615_RS12035 8ffec12e7b1fcbe41b8ea8aaa1b19125 372 Gene3D G3DSA:2.40.50.100 175 208 1.9E-24 T 22-04-2016 R615_RS12035 8ffec12e7b1fcbe41b8ea8aaa1b19125 372 Gene3D G3DSA:2.40.50.100 67 100 1.9E-24 T 22-04-2016 R615_RS12035 8ffec12e7b1fcbe41b8ea8aaa1b19125 372 PANTHER PTHR30158 1 370 2.5E-137 T 22-04-2016 R615_RS12035 8ffec12e7b1fcbe41b8ea8aaa1b19125 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 286 8.3E-21 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain R615_RS12035 8ffec12e7b1fcbe41b8ea8aaa1b19125 372 PANTHER PTHR30158:SF3 1 370 2.5E-137 T 22-04-2016 R615_RS13085 edd31fe870ff0545a75d0c3200dabc60 301 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 291 3.8E-119 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 R615_RS13085 edd31fe870ff0545a75d0c3200dabc60 301 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 3.6E-108 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 R615_RS13085 edd31fe870ff0545a75d0c3200dabc60 301 PANTHER PTHR33694:SF1 1 300 7.0E-128 T 22-04-2016 R615_RS13085 edd31fe870ff0545a75d0c3200dabc60 301 PANTHER PTHR33694 1 300 7.0E-128 T 22-04-2016 R615_RS13085 edd31fe870ff0545a75d0c3200dabc60 301 Gene3D G3DSA:3.30.230.20 3 125 1.3E-45 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 R615_RS13085 edd31fe870ff0545a75d0c3200dabc60 301 Gene3D G3DSA:3.30.1700.10 128 282 8.8E-60 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 R615_RS13085 edd31fe870ff0545a75d0c3200dabc60 301 SUPERFAMILY SSF54211 3 125 6.37E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS13085 edd31fe870ff0545a75d0c3200dabc60 301 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 49.55 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 R615_RS13085 edd31fe870ff0545a75d0c3200dabc60 301 SUPERFAMILY SSF54211 134 276 1.59E-51 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS14755 b88d1bb43bf3bd464381582063d4fac6 123 PANTHER PTHR35303:SF1 2 114 3.4E-48 T 22-04-2016 R615_RS14755 b88d1bb43bf3bd464381582063d4fac6 123 PANTHER PTHR35303 2 114 3.4E-48 T 22-04-2016 R615_RS14755 b88d1bb43bf3bd464381582063d4fac6 123 Pfam PF06155 Protein of unknown function (DUF971) 6 88 8.4E-24 T 22-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 R615_RS09695 f402b08f2c52344485ae6f320af0db6d 386 PANTHER PTHR11014:SF63 15 383 3.1E-129 T 22-04-2016 R615_RS09695 f402b08f2c52344485ae6f320af0db6d 386 PANTHER PTHR11014 15 383 3.1E-129 T 22-04-2016 R615_RS09695 f402b08f2c52344485ae6f320af0db6d 386 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 369 2.6E-103 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 R615_RS09695 f402b08f2c52344485ae6f320af0db6d 386 Gene3D G3DSA:3.30.70.360 178 293 2.1E-32 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain R615_RS09695 f402b08f2c52344485ae6f320af0db6d 386 Pfam PF07687 Peptidase dimerisation domain 178 277 1.7E-8 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain R615_RS09695 f402b08f2c52344485ae6f320af0db6d 386 Pfam PF01546 Peptidase family M20/M25/M40 69 376 2.0E-28 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 R615_RS09695 f402b08f2c52344485ae6f320af0db6d 386 Gene3D G3DSA:3.40.630.10 13 174 2.7E-83 T 22-04-2016 R615_RS09695 f402b08f2c52344485ae6f320af0db6d 386 Gene3D G3DSA:3.40.630.10 294 378 2.7E-83 T 22-04-2016 R615_RS09695 f402b08f2c52344485ae6f320af0db6d 386 PIRSF PIRSF005962 1 383 6.2E-110 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 R615_RS09695 f402b08f2c52344485ae6f320af0db6d 386 SUPERFAMILY SSF53187 7 193 7.78E-74 T 22-04-2016 R615_RS09695 f402b08f2c52344485ae6f320af0db6d 386 SUPERFAMILY SSF53187 294 378 7.78E-74 T 22-04-2016 R615_RS09695 f402b08f2c52344485ae6f320af0db6d 386 SUPERFAMILY SSF55031 181 291 1.1E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain R615_RS01875 e4c560f9bc9e37f750b76804c672dc57 140 PANTHER PTHR37486 1 140 1.1E-59 T 22-04-2016 R615_RS01875 e4c560f9bc9e37f750b76804c672dc57 140 Pfam PF04386 Stringent starvation protein B 8 119 3.5E-34 T 22-04-2016 IPR007481 Stringent starvation protein B R615_RS01875 e4c560f9bc9e37f750b76804c672dc57 140 Gene3D G3DSA:2.30.30.220 3 107 2.3E-47 T 22-04-2016 IPR007481 Stringent starvation protein B R615_RS01875 e4c560f9bc9e37f750b76804c672dc57 140 SUPERFAMILY SSF101738 2 109 1.44E-45 T 22-04-2016 IPR007481 Stringent starvation protein B R615_RS01875 e4c560f9bc9e37f750b76804c672dc57 140 PIRSF PIRSF005276 2 140 5.3E-51 T 22-04-2016 IPR007481 Stringent starvation protein B R615_RS01875 e4c560f9bc9e37f750b76804c672dc57 140 PANTHER PTHR37486:SF1 1 140 1.1E-59 T 22-04-2016 R615_RS02550 02eab1cc69043c0f61f0485d73f4190c 269 PIRSF PIRSF000388 1 269 2.2E-96 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 R615_RS02550 02eab1cc69043c0f61f0485d73f4190c 269 PANTHER PTHR20881 1 267 1.8E-146 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 R615_RS02550 02eab1cc69043c0f61f0485d73f4190c 269 Gene3D G3DSA:3.20.20.60 3 267 9.1E-107 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS02550 02eab1cc69043c0f61f0485d73f4190c 269 SUPERFAMILY SSF51621 4 267 1.69E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS02550 02eab1cc69043c0f61f0485d73f4190c 269 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 262 1.2E-103 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 R615_RS02550 02eab1cc69043c0f61f0485d73f4190c 269 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 267 40.615 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 R615_RS02550 02eab1cc69043c0f61f0485d73f4190c 269 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 267 9.5E-102 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 R615_RS02550 02eab1cc69043c0f61f0485d73f4190c 269 PANTHER PTHR20881:SF3 1 267 1.8E-146 T 22-04-2016 R615_RS15880 5be29cb578f90d04c9a0027032de58ff 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 R615_RS15880 5be29cb578f90d04c9a0027032de58ff 103 SMART SM01403 7 101 2.7E-54 T 22-04-2016 IPR027486 Ribosomal protein S10 domain R615_RS15880 5be29cb578f90d04c9a0027032de58ff 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 R615_RS15880 5be29cb578f90d04c9a0027032de58ff 103 Gene3D G3DSA:3.30.70.600 3 102 2.2E-43 T 22-04-2016 IPR027486 Ribosomal protein S10 domain R615_RS15880 5be29cb578f90d04c9a0027032de58ff 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 8.2E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain R615_RS15880 5be29cb578f90d04c9a0027032de58ff 103 PANTHER PTHR11700 1 102 5.4E-53 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 R615_RS15880 5be29cb578f90d04c9a0027032de58ff 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15880 5be29cb578f90d04c9a0027032de58ff 103 SUPERFAMILY SSF54999 5 101 2.22E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain R615_RS15880 5be29cb578f90d04c9a0027032de58ff 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.6E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 R615_RS15880 5be29cb578f90d04c9a0027032de58ff 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.6E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 R615_RS15880 5be29cb578f90d04c9a0027032de58ff 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.6E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 Pfam PF00106 short chain dehydrogenase 4 194 1.8E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 PANTHER PTHR24322:SF631 153 185 1.1E-38 T 22-04-2016 R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 PANTHER PTHR24322:SF631 7 137 1.1E-38 T 22-04-2016 R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 Gene3D G3DSA:3.40.50.720 3 243 6.7E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 SUPERFAMILY SSF51735 3 234 6.76E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 PANTHER PTHR24322 153 185 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 PANTHER PTHR24322 7 137 1.1E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07400 62ad18df435d5c5948a6c6a721e92f57 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS05705 40eea3332f450e3e314767960079aa49 334 PRINTS PR01486 Bacterial phospholipase A1 protein signature 303 323 2.1E-27 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 R615_RS05705 40eea3332f450e3e314767960079aa49 334 PRINTS PR01486 Bacterial phospholipase A1 protein signature 246 264 2.1E-27 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 R615_RS05705 40eea3332f450e3e314767960079aa49 334 PRINTS PR01486 Bacterial phospholipase A1 protein signature 281 298 2.1E-27 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 R615_RS05705 40eea3332f450e3e314767960079aa49 334 PRINTS PR01486 Bacterial phospholipase A1 protein signature 140 156 2.1E-27 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 R615_RS05705 40eea3332f450e3e314767960079aa49 334 PRINTS PR01486 Bacterial phospholipase A1 protein signature 163 182 2.1E-27 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 R615_RS05705 40eea3332f450e3e314767960079aa49 334 PANTHER PTHR40457 45 334 1.9E-62 T 22-04-2016 R615_RS05705 40eea3332f450e3e314767960079aa49 334 Pfam PF02253 Phospholipase A1 64 330 5.4E-90 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 R615_RS05705 40eea3332f450e3e314767960079aa49 334 Gene3D G3DSA:2.40.230.10 65 333 3.2E-81 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 R615_RS05705 40eea3332f450e3e314767960079aa49 334 SUPERFAMILY SSF56931 68 334 5.75E-81 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 R615_RS16325 95d036ad042760d301e0967e7ed92738 505 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 504 3.3E-235 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 R615_RS16325 95d036ad042760d301e0967e7ed92738 505 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 320 409 1.4E-22 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 R615_RS16325 95d036ad042760d301e0967e7ed92738 505 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 419 504 3.4E-22 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 R615_RS16325 95d036ad042760d301e0967e7ed92738 505 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 306 8.9E-82 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme R615_RS16325 95d036ad042760d301e0967e7ed92738 505 PANTHER PTHR10314 1 358 3.0E-192 T 22-04-2016 R615_RS16325 95d036ad042760d301e0967e7ed92738 505 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 R615_RS16325 95d036ad042760d301e0967e7ed92738 505 SUPERFAMILY SSF55021 410 504 1.46E-26 T 22-04-2016 R615_RS16325 95d036ad042760d301e0967e7ed92738 505 Gene3D G3DSA:3.40.1020.10 386 504 2.4E-40 T 22-04-2016 R615_RS16325 95d036ad042760d301e0967e7ed92738 505 Gene3D G3DSA:3.40.50.1100 108 336 1.4E-76 T 22-04-2016 R615_RS16325 95d036ad042760d301e0967e7ed92738 505 PANTHER PTHR10314:SF30 1 358 3.0E-192 T 22-04-2016 R615_RS16325 95d036ad042760d301e0967e7ed92738 505 Gene3D G3DSA:3.40.50.1100 19 107 3.1E-8 T 22-04-2016 R615_RS16325 95d036ad042760d301e0967e7ed92738 505 SUPERFAMILY SSF53686 4 355 1.7E-106 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme R615_RS11295 7e6f5dc15605066c4ab5c5a6307d0824 219 Gene3D G3DSA:1.10.10.10 5 67 1.6E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS11295 7e6f5dc15605066c4ab5c5a6307d0824 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 7.4E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS11295 7e6f5dc15605066c4ab5c5a6307d0824 219 Pfam PF07729 FCD domain 82 195 4.9E-11 T 22-04-2016 IPR011711 GntR, C-terminal R615_RS11295 7e6f5dc15605066c4ab5c5a6307d0824 219 SMART SM00345 13 71 6.3E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS11295 7e6f5dc15605066c4ab5c5a6307d0824 219 PANTHER PTHR11751 11 97 4.5E-16 T 22-04-2016 R615_RS11295 7e6f5dc15605066c4ab5c5a6307d0824 219 PANTHER PTHR11751:SF436 11 97 4.5E-16 T 22-04-2016 R615_RS11295 7e6f5dc15605066c4ab5c5a6307d0824 219 SUPERFAMILY SSF46785 2 75 1.67E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS11295 7e6f5dc15605066c4ab5c5a6307d0824 219 SUPERFAMILY SSF48008 77 213 8.37E-8 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal R615_RS11295 7e6f5dc15605066c4ab5c5a6307d0824 219 Gene3D G3DSA:1.20.120.530 68 207 3.5E-9 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal R615_RS16005 94ec87c869b972edf4ca8e09b80aecc4 274 SUPERFAMILY SSF53850 27 231 5.67E-18 T 22-04-2016 R615_RS06010 66427ed232b42f63a16e10798b5eb223 201 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 200 8.0E-52 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 R615_RS06010 66427ed232b42f63a16e10798b5eb223 201 Pfam PF04279 Intracellular septation protein A 1 198 5.6E-67 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 R615_RS06010 66427ed232b42f63a16e10798b5eb223 201 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 199 18.684 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 R615_RS06010 66427ed232b42f63a16e10798b5eb223 201 PANTHER PTHR36917:SF1 1 20 9.0E-60 T 22-04-2016 R615_RS06010 66427ed232b42f63a16e10798b5eb223 201 PANTHER PTHR36917:SF1 44 201 9.0E-60 T 22-04-2016 R615_RS06010 66427ed232b42f63a16e10798b5eb223 201 PANTHER PTHR36917 1 20 9.0E-60 T 22-04-2016 R615_RS06010 66427ed232b42f63a16e10798b5eb223 201 PANTHER PTHR36917 44 201 9.0E-60 T 22-04-2016 R615_RS14250 583392ad825cf3cfc44f65f224d35dfa 295 PANTHER PTHR11941 90 275 7.6E-102 T 22-04-2016 R615_RS14250 583392ad825cf3cfc44f65f224d35dfa 295 PANTHER PTHR11941 1 71 7.6E-102 T 22-04-2016 R615_RS14250 583392ad825cf3cfc44f65f224d35dfa 295 PANTHER PTHR11941:SF95 90 275 7.6E-102 T 22-04-2016 R615_RS14250 583392ad825cf3cfc44f65f224d35dfa 295 PANTHER PTHR11941:SF95 1 71 7.6E-102 T 22-04-2016 R615_RS14250 583392ad825cf3cfc44f65f224d35dfa 295 Gene3D G3DSA:3.90.226.10 1 276 1.1E-79 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS14250 583392ad825cf3cfc44f65f224d35dfa 295 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 277 8.8E-55 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 R615_RS14250 583392ad825cf3cfc44f65f224d35dfa 295 SUPERFAMILY SSF52096 1 276 4.85E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS09170 16687cee6ac22e0f27ef4171fa7416c1 411 PANTHER PTHR10742:SF221 3 294 9.8E-31 T 22-04-2016 R615_RS09170 16687cee6ac22e0f27ef4171fa7416c1 411 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 75 1.3E-13 T 22-04-2016 R615_RS09170 16687cee6ac22e0f27ef4171fa7416c1 411 SUPERFAMILY SSF51905 1 300 2.91E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09170 16687cee6ac22e0f27ef4171fa7416c1 411 SUPERFAMILY SSF51905 368 406 2.91E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09170 16687cee6ac22e0f27ef4171fa7416c1 411 PANTHER PTHR10742 3 294 9.8E-31 T 22-04-2016 R615_RS09170 16687cee6ac22e0f27ef4171fa7416c1 411 Gene3D G3DSA:3.50.50.60 5 42 7.2E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09170 16687cee6ac22e0f27ef4171fa7416c1 411 Gene3D G3DSA:3.50.50.60 208 278 7.2E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS09170 16687cee6ac22e0f27ef4171fa7416c1 411 Gene3D G3DSA:3.50.50.60 367 406 7.2E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS03795 fd5c474992b168c8d49e31bc27fb7e8f 160 PANTHER PTHR30308 1 160 9.5E-73 T 22-04-2016 R615_RS03795 fd5c474992b168c8d49e31bc27fb7e8f 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 67.261 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 R615_RS03795 fd5c474992b168c8d49e31bc27fb7e8f 160 Gene3D G3DSA:2.40.280.10 13 133 4.1E-49 T 22-04-2016 IPR023620 Small protein B R615_RS03795 fd5c474992b168c8d49e31bc27fb7e8f 160 SUPERFAMILY SSF74982 9 138 1.11E-47 T 22-04-2016 IPR023620 Small protein B R615_RS03795 fd5c474992b168c8d49e31bc27fb7e8f 160 Pfam PF01668 SmpB protein 13 76 3.2E-29 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 R615_RS03795 fd5c474992b168c8d49e31bc27fb7e8f 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 1.1E-51 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 R615_RS03795 fd5c474992b168c8d49e31bc27fb7e8f 160 PANTHER PTHR30308:SF2 1 160 9.5E-73 T 22-04-2016 R615_RS03795 fd5c474992b168c8d49e31bc27fb7e8f 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 136 7.0E-41 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 266 294 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 PANTHER PTHR22572 98 294 7.4E-42 T 22-04-2016 R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 PANTHER PTHR22572:SF117 98 294 7.4E-42 T 22-04-2016 R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 Gene3D G3DSA:2.160.10.10 271 335 6.1E-11 T 22-04-2016 R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 Gene3D G3DSA:2.160.10.10 74 162 4.4E-21 T 22-04-2016 R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 221 256 3.9E-8 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 178 4.0E-6 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 257 291 6.2E-5 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 141 2.0E-8 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 328 2.5E-113 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 SUPERFAMILY SSF51161 34 316 2.9E-79 T 22-04-2016 IPR011004 Trimeric LpxA-like R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 Gene3D G3DSA:2.160.10.10 163 270 1.7E-22 T 22-04-2016 R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 8.0E-23 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 R615_RS05375 9d59b36b8341e50194cc1f871046cfa7 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 325 35.714 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 R615_RS11075 0461c035476063277c62c883c1db1818 840 SUPERFAMILY SSF52540 38 358 6.57E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11075 0461c035476063277c62c883c1db1818 840 Pfam PF00271 Helicase conserved C-terminal domain 225 346 3.4E-13 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS11075 0461c035476063277c62c883c1db1818 840 Pfam PF08482 ATP-dependent helicase C-terminal 694 825 9.8E-55 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal R615_RS11075 0461c035476063277c62c883c1db1818 840 PIRSF PIRSF005496 16 839 6.8E-289 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type R615_RS11075 0461c035476063277c62c883c1db1818 840 Pfam PF04408 Helicase associated domain (HA2) 407 463 3.0E-7 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 R615_RS11075 0461c035476063277c62c883c1db1818 840 SMART SM00490 246 347 2.9E-15 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS11075 0461c035476063277c62c883c1db1818 840 Pfam PF00270 DEAD/DEAH box helicase 35 178 4.6E-9 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS11075 0461c035476063277c62c883c1db1818 840 Gene3D G3DSA:3.40.50.300 20 177 3.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11075 0461c035476063277c62c883c1db1818 840 SMART SM00847 406 493 0.0026 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 R615_RS11075 0461c035476063277c62c883c1db1818 840 PANTHER PTHR18934 20 461 7.7E-138 T 22-04-2016 R615_RS11075 0461c035476063277c62c883c1db1818 840 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 20 837 7.9E-285 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type R615_RS11075 0461c035476063277c62c883c1db1818 840 SMART SM00487 18 216 2.8E-18 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS11075 0461c035476063277c62c883c1db1818 840 Gene3D G3DSA:3.40.50.300 219 363 2.1E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11075 0461c035476063277c62c883c1db1818 840 PANTHER PTHR18934:SF118 20 461 7.7E-138 T 22-04-2016 R615_RS14600 81515bfea1db02d3dca78e86729b3438 140 PANTHER PTHR30574:SF1 9 136 3.1E-35 T 22-04-2016 R615_RS14600 81515bfea1db02d3dca78e86729b3438 140 PANTHER PTHR30574 9 136 3.1E-35 T 22-04-2016 R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 SMART SM00487 78 262 4.1E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 549 700 1.1E-20 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 9 1297 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 PANTHER PTHR18934 60 712 0.0 T 22-04-2016 R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 PANTHER PTHR18934 742 870 0.0 T 22-04-2016 R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 PANTHER PTHR18934:SF109 60 712 0.0 T 22-04-2016 R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 PANTHER PTHR18934:SF109 742 870 0.0 T 22-04-2016 R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 Pfam PF00270 DEAD/DEAH box helicase 90 236 2.6E-6 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 Pfam PF11898 Domain of unknown function (DUF3418) 716 1297 2.1E-170 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 SUPERFAMILY SSF52540 81 591 1.3E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 Pfam PF04408 Helicase associated domain (HA2) 476 561 5.6E-17 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 SMART SM00382 95 393 1.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 SMART SM00490 313 413 1.4E-13 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 Pfam PF00271 Helicase conserved C-terminal domain 294 412 2.6E-10 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 Gene3D G3DSA:3.40.50.300 283 425 1.5E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 Gene3D G3DSA:3.40.50.300 80 237 6.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09280 f8e4b98c8a86e965f893c01d3faf4ea3 1303 SMART SM00847 473 563 4.3E-32 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 R615_RS15845 2bd0065dceb599d589bbc03bf34f8fd1 229 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.8E-96 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 R615_RS15845 2bd0065dceb599d589bbc03bf34f8fd1 229 PANTHER PTHR11760:SF19 2 213 9.2E-137 T 22-04-2016 R615_RS15845 2bd0065dceb599d589bbc03bf34f8fd1 229 Gene3D G3DSA:3.30.1140.32 108 207 3.6E-47 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 R615_RS15845 2bd0065dceb599d589bbc03bf34f8fd1 229 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.8E-40 T 22-04-2016 R615_RS15845 2bd0065dceb599d589bbc03bf34f8fd1 229 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site R615_RS15845 2bd0065dceb599d589bbc03bf34f8fd1 229 SUPERFAMILY SSF54821 108 206 2.35E-40 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 R615_RS15845 2bd0065dceb599d589bbc03bf34f8fd1 229 Gene3D G3DSA:3.30.300.20 17 107 7.6E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta R615_RS15845 2bd0065dceb599d589bbc03bf34f8fd1 229 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.283 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 R615_RS15845 2bd0065dceb599d589bbc03bf34f8fd1 229 SMART SM00322 60 125 3.5E-6 T 22-04-2016 IPR004087 K Homology domain GO:0003676 R615_RS15845 2bd0065dceb599d589bbc03bf34f8fd1 229 Pfam PF07650 KH domain 39 110 1.2E-18 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 R615_RS15845 2bd0065dceb599d589bbc03bf34f8fd1 229 SUPERFAMILY SSF54814 2 106 4.71E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 R615_RS15845 2bd0065dceb599d589bbc03bf34f8fd1 229 PANTHER PTHR11760 2 213 9.2E-137 T 22-04-2016 R615_RS12975 3438580a5e9070a3196246d43d928c9c 285 SUPERFAMILY SSF54211 7 160 1.82E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS12975 3438580a5e9070a3196246d43d928c9c 285 Gene3D G3DSA:3.30.230.10 9 161 3.4E-53 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS12975 3438580a5e9070a3196246d43d928c9c 285 Pfam PF00288 GHMP kinases N terminal domain 89 146 1.2E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 R615_RS12975 3438580a5e9070a3196246d43d928c9c 285 PIRSF PIRSF010376 5 281 1.7E-82 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS12975 3438580a5e9070a3196246d43d928c9c 285 SUPERFAMILY SSF55060 164 280 2.59E-30 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain R615_RS12975 3438580a5e9070a3196246d43d928c9c 285 PANTHER PTHR20861 5 280 1.0E-86 T 22-04-2016 R615_RS12975 3438580a5e9070a3196246d43d928c9c 285 Gene3D G3DSA:3.30.70.890 166 281 2.7E-36 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain R615_RS12975 3438580a5e9070a3196246d43d928c9c 285 PANTHER PTHR20861:SF2 5 280 1.0E-86 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS12975 3438580a5e9070a3196246d43d928c9c 285 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 8 280 4.6E-84 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS12975 3438580a5e9070a3196246d43d928c9c 285 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 7 274 32.722 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 R615_RS08440 b20bf028d6d1edf83f62a324c7d1d560 89 PANTHER PTHR11544 1 64 3.9E-36 T 22-04-2016 R615_RS08440 b20bf028d6d1edf83f62a324c7d1d560 89 SMART SM00357 3 67 7.6E-25 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 R615_RS08440 b20bf028d6d1edf83f62a324c7d1d560 89 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.4E-27 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 R615_RS08440 b20bf028d6d1edf83f62a324c7d1d560 89 PRINTS PR00050 Cold shock protein signature 40 58 3.2E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 R615_RS08440 b20bf028d6d1edf83f62a324c7d1d560 89 PRINTS PR00050 Cold shock protein signature 25 34 3.2E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 R615_RS08440 b20bf028d6d1edf83f62a324c7d1d560 89 PRINTS PR00050 Cold shock protein signature 4 19 3.2E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 R615_RS08440 b20bf028d6d1edf83f62a324c7d1d560 89 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site R615_RS08440 b20bf028d6d1edf83f62a324c7d1d560 89 PANTHER PTHR11544:SF52 1 64 3.9E-36 T 22-04-2016 R615_RS08440 b20bf028d6d1edf83f62a324c7d1d560 89 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 66 5.8E-37 T 22-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 R615_RS08440 b20bf028d6d1edf83f62a324c7d1d560 89 Gene3D G3DSA:2.40.50.140 1 65 1.2E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS08440 b20bf028d6d1edf83f62a324c7d1d560 89 SUPERFAMILY SSF50249 1 67 4.07E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 Gene3D G3DSA:3.40.50.300 308 527 2.7E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 Gene3D G3DSA:3.40.50.300 1 260 7.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 PANTHER PTHR19211 1 555 8.7E-295 T 22-04-2016 R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 SUPERFAMILY SSF52540 291 514 2.36E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 PANTHER PTHR19211:SF49 1 555 8.7E-295 T 22-04-2016 R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 Pfam PF16326 ABC transporter C-terminal domain 542 624 9.1E-9 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 SMART SM00382 334 501 1.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 SMART SM00382 26 219 2.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 SUPERFAMILY SSF52540 2 243 3.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 Pfam PF12848 ABC transporter 214 293 1.4E-26 T 22-04-2016 IPR032781 ABC-transporter extension domain R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 Pfam PF00005 ABC transporter 18 175 1.2E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS16790 aaa3135706e37737941c0944a8f0782b 630 Pfam PF00005 ABC transporter 327 456 3.5E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS07030 2cf298bbe98172ec5231ab9b4ad362f6 502 SUPERFAMILY SSF51391 305 483 3.66E-46 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 R615_RS07030 2cf298bbe98172ec5231ab9b4ad362f6 502 SUPERFAMILY SSF53613 10 268 4.37E-45 T 22-04-2016 IPR029056 Ribokinase-like R615_RS07030 2cf298bbe98172ec5231ab9b4ad362f6 502 Pfam PF02581 Thiamine monophosphate synthase/TENI 315 482 1.8E-41 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 R615_RS07030 2cf298bbe98172ec5231ab9b4ad362f6 502 PANTHER PTHR20858 1 268 3.1E-39 T 22-04-2016 R615_RS07030 2cf298bbe98172ec5231ab9b4ad362f6 502 Pfam PF08543 Phosphomethylpyrimidine kinase 20 268 1.0E-41 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 R615_RS07030 2cf298bbe98172ec5231ab9b4ad362f6 502 Gene3D G3DSA:3.40.1190.20 11 267 4.1E-52 T 22-04-2016 IPR029056 Ribokinase-like R615_RS07030 2cf298bbe98172ec5231ab9b4ad362f6 502 Gene3D G3DSA:3.20.20.70 301 483 5.8E-45 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS16730 25f5b35a5e115641b3e2ff2526c6e79d 325 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 181 195 - T 22-04-2016 IPR019775 WD40 repeat, conserved site R615_RS16730 25f5b35a5e115641b3e2ff2526c6e79d 325 PANTHER PTHR22847 44 288 3.8E-31 T 22-04-2016 R615_RS16730 25f5b35a5e115641b3e2ff2526c6e79d 325 Pfam PF13360 PQQ-like domain 62 282 3.7E-8 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat R615_RS16730 25f5b35a5e115641b3e2ff2526c6e79d 325 SMART SM00320 156 194 0.028 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 R615_RS16730 25f5b35a5e115641b3e2ff2526c6e79d 325 SMART SM00320 238 277 0.042 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 R615_RS16730 25f5b35a5e115641b3e2ff2526c6e79d 325 SMART SM00320 197 235 0.0038 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 R615_RS16730 25f5b35a5e115641b3e2ff2526c6e79d 325 SMART SM00320 71 112 36.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 R615_RS16730 25f5b35a5e115641b3e2ff2526c6e79d 325 SUPERFAMILY SSF50978 43 316 4.03E-42 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 R615_RS16730 25f5b35a5e115641b3e2ff2526c6e79d 325 Gene3D G3DSA:2.130.10.10 42 311 1.4E-42 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 R615_RS03130 607b0749b83c1b1a4794d78a459fc356 379 SUPERFAMILY SSF69189 269 361 6.87E-22 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS03130 607b0749b83c1b1a4794d78a459fc356 379 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 25 249 1.7E-79 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 R615_RS03130 607b0749b83c1b1a4794d78a459fc356 379 PANTHER PTHR21581 22 378 7.2E-111 T 22-04-2016 R615_RS03130 607b0749b83c1b1a4794d78a459fc356 379 Gene3D G3DSA:2.60.410.10 269 359 1.2E-24 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS03130 607b0749b83c1b1a4794d78a459fc356 379 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 56 67 3.1E-16 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 R615_RS03130 607b0749b83c1b1a4794d78a459fc356 379 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 109 126 3.1E-16 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 R615_RS03130 607b0749b83c1b1a4794d78a459fc356 379 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 136 149 3.1E-16 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 R615_RS03130 607b0749b83c1b1a4794d78a459fc356 379 Gene3D G3DSA:3.40.710.10 7 267 8.1E-99 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS03130 607b0749b83c1b1a4794d78a459fc356 379 PANTHER PTHR21581:SF3 22 378 7.2E-111 T 22-04-2016 R615_RS03130 607b0749b83c1b1a4794d78a459fc356 379 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 269 359 1.4E-21 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS03130 607b0749b83c1b1a4794d78a459fc356 379 SMART SM00936 269 359 6.8E-28 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS03130 607b0749b83c1b1a4794d78a459fc356 379 SUPERFAMILY SSF56601 4 268 1.05E-82 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS03650 9e438edcda632e73b6ee2f350e263bf2 370 SUPERFAMILY SSF56399 238 349 1.22E-21 T 22-04-2016 R615_RS03650 9e438edcda632e73b6ee2f350e263bf2 370 Pfam PF02917 Pertussis toxin, subunit 1 238 289 2.5E-5 T 22-04-2016 IPR003898 Bordetella pertussis toxin A GO:0003950|GO:0005576|GO:0009405 R615_RS03650 9e438edcda632e73b6ee2f350e263bf2 370 Gene3D G3DSA:3.90.210.10 238 364 1.7E-23 T 22-04-2016 R615_RS07275 de6427618da145f0af9e1854a09fbbed 467 SUPERFAMILY SSF52540 201 431 3.18E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07275 de6427618da145f0af9e1854a09fbbed 467 Gene3D G3DSA:3.40.50.300 204 386 1.4E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07275 de6427618da145f0af9e1854a09fbbed 467 PANTHER PTHR23073:SF37 200 467 5.2E-35 T 22-04-2016 R615_RS07275 de6427618da145f0af9e1854a09fbbed 467 PANTHER PTHR23073 200 467 5.2E-35 T 22-04-2016 R615_RS07275 de6427618da145f0af9e1854a09fbbed 467 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 249 372 5.7E-28 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS07275 de6427618da145f0af9e1854a09fbbed 467 SMART SM00382 244 376 6.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS02085 77ffc219c4c256d9d004b22d123af547 241 PANTHER PTHR24220:SF497 5 238 7.2E-143 T 22-04-2016 R615_RS02085 77ffc219c4c256d9d004b22d123af547 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 5.2E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal R615_RS02085 77ffc219c4c256d9d004b22d123af547 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS02085 77ffc219c4c256d9d004b22d123af547 241 Pfam PF00005 ABC transporter 19 166 3.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS02085 77ffc219c4c256d9d004b22d123af547 241 SUPERFAMILY SSF52540 4 237 4.31E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02085 77ffc219c4c256d9d004b22d123af547 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 8.3E-120 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 R615_RS02085 77ffc219c4c256d9d004b22d123af547 241 PANTHER PTHR24220 5 238 7.2E-143 T 22-04-2016 R615_RS02085 77ffc219c4c256d9d004b22d123af547 241 SMART SM00382 28 231 2.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS02085 77ffc219c4c256d9d004b22d123af547 241 Gene3D G3DSA:3.40.50.300 3 234 2.4E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02025 1521d869aede8033e765181272fa07d0 158 Pfam PF04093 rod shape-determining protein MreD 8 146 1.3E-14 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 R615_RS02025 1521d869aede8033e765181272fa07d0 158 PANTHER PTHR37484 1 146 2.8E-22 T 22-04-2016 R615_RS02025 1521d869aede8033e765181272fa07d0 158 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 148 6.0E-20 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 R615_RS12275 7ce29448ed6433ae5b3120ad2f3ec5ca 429 SUPERFAMILY SSF54631 195 331 1.21E-32 T 22-04-2016 R615_RS12275 7ce29448ed6433ae5b3120ad2f3ec5ca 429 SMART SM00116 216 265 0.0033 T 22-04-2016 IPR000644 CBS domain R615_RS12275 7ce29448ed6433ae5b3120ad2f3ec5ca 429 SMART SM00116 280 328 6.4 T 22-04-2016 IPR000644 CBS domain R615_RS12275 7ce29448ed6433ae5b3120ad2f3ec5ca 429 SUPERFAMILY SSF56176 342 426 1.45E-19 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 R615_RS12275 7ce29448ed6433ae5b3120ad2f3ec5ca 429 Gene3D G3DSA:3.10.580.10 195 321 3.9E-24 T 22-04-2016 R615_RS12275 7ce29448ed6433ae5b3120ad2f3ec5ca 429 SMART SM01091 344 422 1.8E-21 T 22-04-2016 IPR005170 Transporter-associated domain R615_RS12275 7ce29448ed6433ae5b3120ad2f3ec5ca 429 Pfam PF01595 Domain of unknown function DUF21 12 184 6.0E-47 T 22-04-2016 IPR002550 Domain of unknown function DUF21 R615_RS12275 7ce29448ed6433ae5b3120ad2f3ec5ca 429 Pfam PF00571 CBS domain 209 265 5.7E-6 T 22-04-2016 IPR000644 CBS domain R615_RS12275 7ce29448ed6433ae5b3120ad2f3ec5ca 429 Pfam PF00571 CBS domain 275 328 3.5E-6 T 22-04-2016 IPR000644 CBS domain R615_RS12275 7ce29448ed6433ae5b3120ad2f3ec5ca 429 PANTHER PTHR22777 1 419 5.7E-140 T 22-04-2016 R615_RS12275 7ce29448ed6433ae5b3120ad2f3ec5ca 429 Gene3D G3DSA:3.30.465.10 322 419 1.7E-20 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 R615_RS12275 7ce29448ed6433ae5b3120ad2f3ec5ca 429 Pfam PF03471 Transporter associated domain 346 421 9.1E-15 T 22-04-2016 IPR005170 Transporter-associated domain R615_RS15405 0b4ea5ffb3d4245973629d7325e5970c 295 Pfam PF03280 Proteobacterial lipase chaperone protein 93 282 4.3E-43 T 22-04-2016 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 R615_RS15405 0b4ea5ffb3d4245973629d7325e5970c 295 SUPERFAMILY SSF158855 26 287 4.97E-49 T 22-04-2016 R615_RS03165 4cdc1aa36126d4d04d6a6fbc40a356ca 147 SUPERFAMILY SSF52833 25 140 1.91E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS03165 4cdc1aa36126d4d04d6a6fbc40a356ca 147 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 R615_RS03165 4cdc1aa36126d4d04d6a6fbc40a356ca 147 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 139 5.8E-35 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 R615_RS03165 4cdc1aa36126d4d04d6a6fbc40a356ca 147 PANTHER PTHR10438 25 138 6.6E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 R615_RS03165 4cdc1aa36126d4d04d6a6fbc40a356ca 147 PRINTS PR00421 Thioredoxin family signature 56 64 2.8E-8 T 22-04-2016 R615_RS03165 4cdc1aa36126d4d04d6a6fbc40a356ca 147 PRINTS PR00421 Thioredoxin family signature 104 115 2.8E-8 T 22-04-2016 R615_RS03165 4cdc1aa36126d4d04d6a6fbc40a356ca 147 PRINTS PR00421 Thioredoxin family signature 64 73 2.8E-8 T 22-04-2016 R615_RS03165 4cdc1aa36126d4d04d6a6fbc40a356ca 147 PANTHER PTHR10438:SF266 25 138 6.6E-39 T 22-04-2016 R615_RS03165 4cdc1aa36126d4d04d6a6fbc40a356ca 147 Gene3D G3DSA:3.40.30.10 34 139 1.4E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS03165 4cdc1aa36126d4d04d6a6fbc40a356ca 147 Pfam PF00085 Thioredoxin 38 138 6.6E-29 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 R615_RS03780 3c40ec0a425be009be0ae8f53a370348 1108 PANTHER PTHR13370:SF7 801 892 9.3E-17 T 22-04-2016 R615_RS03780 3c40ec0a425be009be0ae8f53a370348 1108 PANTHER PTHR13370:SF7 578 725 9.3E-17 T 22-04-2016 R615_RS03780 3c40ec0a425be009be0ae8f53a370348 1108 PANTHER PTHR13370:SF7 370 501 9.3E-17 T 22-04-2016 R615_RS03780 3c40ec0a425be009be0ae8f53a370348 1108 SUPERFAMILY SSF53335 468 612 1.08E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03780 3c40ec0a425be009be0ae8f53a370348 1108 SUPERFAMILY SSF53335 795 891 1.08E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03780 3c40ec0a425be009be0ae8f53a370348 1108 Pfam PF01555 DNA methylase 492 881 7.8E-27 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 R615_RS03780 3c40ec0a425be009be0ae8f53a370348 1108 Gene3D G3DSA:3.40.50.150 771 892 6.7E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03780 3c40ec0a425be009be0ae8f53a370348 1108 Gene3D G3DSA:3.40.50.150 639 640 6.7E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03780 3c40ec0a425be009be0ae8f53a370348 1108 Gene3D G3DSA:3.40.50.150 470 596 6.7E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03780 3c40ec0a425be009be0ae8f53a370348 1108 PANTHER PTHR13370 801 892 9.3E-17 T 22-04-2016 R615_RS03780 3c40ec0a425be009be0ae8f53a370348 1108 PANTHER PTHR13370 578 725 9.3E-17 T 22-04-2016 R615_RS03780 3c40ec0a425be009be0ae8f53a370348 1108 PANTHER PTHR13370 370 501 9.3E-17 T 22-04-2016 R615_RS11525 ac0f279e9fa00839e114df6dca8a682b 280 Pfam PF01694 Rhomboid family 134 270 4.7E-24 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 R615_RS11525 ac0f279e9fa00839e114df6dca8a682b 280 Gene3D G3DSA:1.20.1540.10 85 270 1.0E-25 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 R615_RS11525 ac0f279e9fa00839e114df6dca8a682b 280 Pfam PF16733 Rhomboid N-terminal domain 1 68 2.0E-25 T 22-04-2016 IPR031976 Rhomboid protease, N-terminal R615_RS11525 ac0f279e9fa00839e114df6dca8a682b 280 PANTHER PTHR22936:SF30 87 269 2.3E-22 T 22-04-2016 R615_RS11525 ac0f279e9fa00839e114df6dca8a682b 280 SUPERFAMILY SSF144091 85 275 3.27E-32 T 22-04-2016 R615_RS11525 ac0f279e9fa00839e114df6dca8a682b 280 PANTHER PTHR22936 87 269 2.3E-22 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 R615_RS11995 3fd38b140575a494581a855c6df3243f 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 319 335 2.2E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS11995 3fd38b140575a494581a855c6df3243f 343 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 319 2.2E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS11995 3fd38b140575a494581a855c6df3243f 343 SUPERFAMILY SSF46689 288 338 3.85E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS11995 3fd38b140575a494581a855c6df3243f 343 PANTHER PTHR11019 224 343 2.2E-25 T 22-04-2016 R615_RS11995 3fd38b140575a494581a855c6df3243f 343 PANTHER PTHR11019 155 194 2.2E-25 T 22-04-2016 R615_RS11995 3fd38b140575a494581a855c6df3243f 343 Gene3D G3DSA:1.10.10.60 288 338 9.3E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS11995 3fd38b140575a494581a855c6df3243f 343 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 289 331 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 R615_RS11995 3fd38b140575a494581a855c6df3243f 343 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 24 211 4.6E-31 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS11995 3fd38b140575a494581a855c6df3243f 343 PANTHER PTHR11019:SF52 224 343 2.2E-25 T 22-04-2016 R615_RS11995 3fd38b140575a494581a855c6df3243f 343 PANTHER PTHR11019:SF52 155 194 2.2E-25 T 22-04-2016 R615_RS11995 3fd38b140575a494581a855c6df3243f 343 SMART SM00342 253 335 2.1E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS11995 3fd38b140575a494581a855c6df3243f 343 Pfam PF12833 Helix-turn-helix domain 260 337 6.6E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS17730 2d2a5e2fc2aef4a1fafe99df29fcfc50 445 PANTHER PTHR10795:SF416 17 416 1.0E-27 T 22-04-2016 R615_RS17730 2d2a5e2fc2aef4a1fafe99df29fcfc50 445 SUPERFAMILY SSF52743 180 424 2.88E-51 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 R615_RS17730 2d2a5e2fc2aef4a1fafe99df29fcfc50 445 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 198 209 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site R615_RS17730 2d2a5e2fc2aef4a1fafe99df29fcfc50 445 PANTHER PTHR10795 17 416 1.0E-27 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17730 2d2a5e2fc2aef4a1fafe99df29fcfc50 445 Gene3D G3DSA:3.40.50.200 174 424 2.0E-50 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 R615_RS17730 2d2a5e2fc2aef4a1fafe99df29fcfc50 445 PRINTS PR00723 Subtilisin serine protease family (S8) signature 235 248 2.6E-12 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17730 2d2a5e2fc2aef4a1fafe99df29fcfc50 445 PRINTS PR00723 Subtilisin serine protease family (S8) signature 392 408 2.6E-12 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17730 2d2a5e2fc2aef4a1fafe99df29fcfc50 445 PRINTS PR00723 Subtilisin serine protease family (S8) signature 193 212 2.6E-12 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17730 2d2a5e2fc2aef4a1fafe99df29fcfc50 445 Pfam PF00082 Subtilase family 193 420 1.0E-30 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 R615_RS04865 7d3bf971582a08f718c7c4894babaa07 467 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 25 464 1.2E-164 T 22-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 R615_RS04865 7d3bf971582a08f718c7c4894babaa07 467 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 464 4.1E-146 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase R615_RS04865 7d3bf971582a08f718c7c4894babaa07 467 SUPERFAMILY SSF51735 143 272 1.12E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04865 7d3bf971582a08f718c7c4894babaa07 467 PANTHER PTHR30576 17 467 4.8E-176 T 22-04-2016 R615_RS04865 7d3bf971582a08f718c7c4894babaa07 467 Pfam PF13727 CoA-binding domain 62 241 1.3E-37 T 22-04-2016 R615_RS04865 7d3bf971582a08f718c7c4894babaa07 467 Pfam PF02397 Bacterial sugar transferase 277 459 4.0E-57 T 22-04-2016 IPR003362 Bacterial sugar transferase R615_RS04865 7d3bf971582a08f718c7c4894babaa07 467 PANTHER PTHR30576:SF0 17 467 4.8E-176 T 22-04-2016 R615_RS10025 91c2f5cf04a6d0e0f900641fd55400ff 108 SUPERFAMILY SSF50022 1 107 4.47E-39 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 R615_RS10025 91c2f5cf04a6d0e0f900641fd55400ff 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 1.5E-35 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 R615_RS10025 91c2f5cf04a6d0e0f900641fd55400ff 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 1.3E-41 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 R615_RS10025 91c2f5cf04a6d0e0f900641fd55400ff 108 Gene3D G3DSA:2.102.10.10 2 107 4.6E-43 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 R615_RS10025 91c2f5cf04a6d0e0f900641fd55400ff 108 PANTHER PTHR40562 1 108 1.2E-36 T 22-04-2016 R615_RS13260 544f4dbb10ef595adb7c835e58095bef 966 Gene3D G3DSA:3.40.640.10 98 322 7.4E-11 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS13260 544f4dbb10ef595adb7c835e58095bef 966 Gene3D G3DSA:3.40.640.10 508 746 8.8E-37 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS13260 544f4dbb10ef595adb7c835e58095bef 966 Pfam PF02347 Glycine cleavage system P-protein 26 445 3.3E-175 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 R615_RS13260 544f4dbb10ef595adb7c835e58095bef 966 Pfam PF02347 Glycine cleavage system P-protein 481 736 1.5E-5 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 R615_RS13260 544f4dbb10ef595adb7c835e58095bef 966 PANTHER PTHR11773:SF1 1 966 0.0 T 22-04-2016 R615_RS13260 544f4dbb10ef595adb7c835e58095bef 966 PANTHER PTHR11773 1 966 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 R615_RS13260 544f4dbb10ef595adb7c835e58095bef 966 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 9 964 24.739 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 R615_RS13260 544f4dbb10ef595adb7c835e58095bef 966 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 26 958 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 R615_RS13260 544f4dbb10ef595adb7c835e58095bef 966 SUPERFAMILY SSF53383 26 447 1.28E-96 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS13260 544f4dbb10ef595adb7c835e58095bef 966 SUPERFAMILY SSF53383 489 895 1.34E-90 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS13260 544f4dbb10ef595adb7c835e58095bef 966 SUPERFAMILY SSF53383 937 959 1.34E-90 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS16720 4bb8fefc72528beee8be45624b14f955 178 Gene3D G3DSA:1.20.1550.10 22 177 5.9E-48 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain R615_RS16720 4bb8fefc72528beee8be45624b14f955 178 PANTHER PTHR36570 22 171 1.1E-34 T 22-04-2016 R615_RS16720 4bb8fefc72528beee8be45624b14f955 178 SUPERFAMILY SSF158442 22 170 5.89E-40 T 22-04-2016 R615_RS16720 4bb8fefc72528beee8be45624b14f955 178 Pfam PF02600 Disulfide bond formation protein DsbB 22 169 3.4E-40 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 R615_RS16720 4bb8fefc72528beee8be45624b14f955 178 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 14 177 20.745 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB R615_RS17430 887969eeaae7b30cf01baefd62d8e7ee 197 Gene3D G3DSA:3.55.40.10 43 192 7.6E-20 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 R615_RS17430 887969eeaae7b30cf01baefd62d8e7ee 197 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 9.5E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17430 887969eeaae7b30cf01baefd62d8e7ee 197 Pfam PF13633 Prokaryotic N-terminal methylation site 8 30 1.6E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17430 887969eeaae7b30cf01baefd62d8e7ee 197 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS17430 887969eeaae7b30cf01baefd62d8e7ee 197 PRINTS PR00885 Bacterial general secretion pathway protein H signature 151 166 1.5E-8 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 R615_RS17430 887969eeaae7b30cf01baefd62d8e7ee 197 PRINTS PR00885 Bacterial general secretion pathway protein H signature 6 20 1.5E-8 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 R615_RS17430 887969eeaae7b30cf01baefd62d8e7ee 197 SUPERFAMILY SSF54523 11 80 7.22E-9 T 22-04-2016 R615_RS08295 9201700c3ed5ce0a2bca7613f613ddd5 390 SUPERFAMILY SSF52172 4 149 6.4E-40 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS08295 9201700c3ed5ce0a2bca7613f613ddd5 390 PANTHER PTHR26402 242 264 1.9E-40 T 22-04-2016 R615_RS08295 9201700c3ed5ce0a2bca7613f613ddd5 390 PANTHER PTHR26402 3 133 1.9E-40 T 22-04-2016 R615_RS08295 9201700c3ed5ce0a2bca7613f613ddd5 390 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 197 385 2.6E-28 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS08295 9201700c3ed5ce0a2bca7613f613ddd5 390 Gene3D G3DSA:3.40.50.2300 3 142 1.4E-38 T 22-04-2016 R615_RS08295 9201700c3ed5ce0a2bca7613f613ddd5 390 SMART SM00331 170 387 8.1E-12 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS08295 9201700c3ed5ce0a2bca7613f613ddd5 390 SMART SM00448 3 114 2.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS08295 9201700c3ed5ce0a2bca7613f613ddd5 390 Pfam PF00072 Response regulator receiver domain 5 112 1.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS02845 350ce71caf6e51fdef18d1afd4eaa806 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 1.3E-58 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 R615_RS02845 350ce71caf6e51fdef18d1afd4eaa806 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 143 7.1E-52 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 R615_RS02845 350ce71caf6e51fdef18d1afd4eaa806 144 Gene3D G3DSA:3.50.80.10 1 143 5.9E-54 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain R615_RS02845 350ce71caf6e51fdef18d1afd4eaa806 144 PANTHER PTHR10472 2 143 8.2E-64 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 R615_RS02845 350ce71caf6e51fdef18d1afd4eaa806 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 33.35 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 R615_RS02845 350ce71caf6e51fdef18d1afd4eaa806 144 SUPERFAMILY SSF69500 1 143 9.81E-54 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain R615_RS12315 fafb5c5d4b9a31128d5a4b02bbdc53e9 213 PIRSF PIRSF005624 1 211 6.5E-50 T 22-04-2016 R615_RS12315 fafb5c5d4b9a31128d5a4b02bbdc53e9 213 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 178 6.1E-40 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain R615_RS12315 fafb5c5d4b9a31128d5a4b02bbdc53e9 213 Gene3D G3DSA:3.40.50.300 5 193 3.3E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12315 fafb5c5d4b9a31128d5a4b02bbdc53e9 213 Hamap MF_01389 Urease accessory protein UreG [ureG]. 4 202 47.551 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 R615_RS12315 fafb5c5d4b9a31128d5a4b02bbdc53e9 213 SUPERFAMILY SSF52540 3 197 1.76E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12315 fafb5c5d4b9a31128d5a4b02bbdc53e9 213 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 6 199 3.5E-107 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 R615_RS03115 d0c2dee1222e94f7e41274fbd0645283 151 PANTHER PTHR33747 1 151 7.3E-26 T 22-04-2016 R615_RS03115 d0c2dee1222e94f7e41274fbd0645283 151 SUPERFAMILY SSF54427 29 124 5.36E-32 T 22-04-2016 IPR032710 NTF2-like domain R615_RS03115 d0c2dee1222e94f7e41274fbd0645283 151 Pfam PF02810 SEC-C motif 134 151 7.4E-9 T 22-04-2016 IPR004027 SEC-C motif R615_RS03115 d0c2dee1222e94f7e41274fbd0645283 151 Pfam PF02810 SEC-C motif 8 24 4.3E-5 T 22-04-2016 IPR004027 SEC-C motif R615_RS03115 d0c2dee1222e94f7e41274fbd0645283 151 Gene3D G3DSA:3.10.450.50 6 151 1.4E-49 T 22-04-2016 IPR032710 NTF2-like domain R615_RS03115 d0c2dee1222e94f7e41274fbd0645283 151 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 6 124 26.133 T 22-04-2016 IPR023006 Uncharacterised protein family UPF0225 R615_RS03115 d0c2dee1222e94f7e41274fbd0645283 151 SUPERFAMILY SSF103642 130 151 2.13E-7 T 22-04-2016 R615_RS17560 2b7fbaa9187b2cad8a402a378b55481f 653 SUPERFAMILY SSF103647 173 230 3.79E-7 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17560 2b7fbaa9187b2cad8a402a378b55481f 653 Pfam PF07581 The GLUG motif 453 478 5.8E-4 T 22-04-2016 IPR011493 GLUG R615_RS17560 2b7fbaa9187b2cad8a402a378b55481f 653 SUPERFAMILY SSF103647 59 174 5.1E-12 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17560 2b7fbaa9187b2cad8a402a378b55481f 653 Gene3D G3DSA:4.10.1080.10 41 173 7.0E-21 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17560 2b7fbaa9187b2cad8a402a378b55481f 653 Gene3D G3DSA:4.10.1080.10 175 277 1.4E-9 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS02690 ce58aa91fd39a3babd4f94ad6e461c24 157 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 3 138 6.9E-53 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 R615_RS02690 ce58aa91fd39a3babd4f94ad6e461c24 157 PANTHER PTHR36918:SF1 2 154 6.6E-69 T 22-04-2016 R615_RS02690 ce58aa91fd39a3babd4f94ad6e461c24 157 PANTHER PTHR36918 2 154 6.6E-69 T 22-04-2016 R615_RS02690 ce58aa91fd39a3babd4f94ad6e461c24 157 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 71 91 2.3E-35 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 R615_RS02690 ce58aa91fd39a3babd4f94ad6e461c24 157 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 11 28 2.3E-35 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 R615_RS02690 ce58aa91fd39a3babd4f94ad6e461c24 157 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 121 139 2.3E-35 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 R615_RS02690 ce58aa91fd39a3babd4f94ad6e461c24 157 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 95 117 2.3E-35 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 R615_RS02690 ce58aa91fd39a3babd4f94ad6e461c24 157 Gene3D G3DSA:3.10.420.10 3 149 1.2E-59 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 R615_RS02690 ce58aa91fd39a3babd4f94ad6e461c24 157 Pfam PF02556 Preprotein translocase subunit SecB 3 141 2.3E-56 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 R615_RS02690 ce58aa91fd39a3babd4f94ad6e461c24 157 Hamap MF_00821 Protein-export protein SecB [secB]. 1 143 33.454 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 R615_RS02690 ce58aa91fd39a3babd4f94ad6e461c24 157 SUPERFAMILY SSF54611 3 140 5.23E-52 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 R615_RS15875 d23c3781e1b101c8bb9cf6d94409b30e 210 Gene3D G3DSA:2.40.30.10 4 33 1.5E-10 T 22-04-2016 R615_RS15875 d23c3781e1b101c8bb9cf6d94409b30e 210 Gene3D G3DSA:2.40.30.10 157 208 1.5E-10 T 22-04-2016 R615_RS15875 d23c3781e1b101c8bb9cf6d94409b30e 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 203 3.1E-91 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15875 d23c3781e1b101c8bb9cf6d94409b30e 210 SUPERFAMILY SSF50447 2 208 2.91E-83 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS15875 d23c3781e1b101c8bb9cf6d94409b30e 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site R615_RS15875 d23c3781e1b101c8bb9cf6d94409b30e 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 206 39.529 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15875 d23c3781e1b101c8bb9cf6d94409b30e 210 PANTHER PTHR11229 3 207 1.4E-118 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15875 d23c3781e1b101c8bb9cf6d94409b30e 210 Pfam PF00297 Ribosomal protein L3 54 181 1.2E-17 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15875 d23c3781e1b101c8bb9cf6d94409b30e 210 Gene3D G3DSA:4.10.960.10 79 156 3.2E-33 T 22-04-2016 R615_RS13240 824de4141cabc80b7c51528cac7d93bd 609 Gene3D G3DSA:3.40.50.720 397 462 1.7E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS13240 824de4141cabc80b7c51528cac7d93bd 609 Pfam PF02254 TrkA-N domain 401 498 7.1E-6 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 R615_RS13240 824de4141cabc80b7c51528cac7d93bd 609 SUPERFAMILY SSF51735 400 498 9.86E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS13240 824de4141cabc80b7c51528cac7d93bd 609 PANTHER PTHR32507 1 603 5.9E-188 T 22-04-2016 R615_RS13240 824de4141cabc80b7c51528cac7d93bd 609 PANTHER PTHR32507:SF0 1 603 5.9E-188 T 22-04-2016 R615_RS13240 824de4141cabc80b7c51528cac7d93bd 609 Pfam PF00999 Sodium/hydrogen exchanger family 10 389 1.2E-36 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 R615_RS01150 48ebcfd798a6b94bb17f83f19f3fb53d 119 SUPERFAMILY SSF46626 41 117 2.66E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS01150 48ebcfd798a6b94bb17f83f19f3fb53d 119 PRINTS PR00607 Class IE cytochrome C signature 105 116 1.1E-15 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 R615_RS01150 48ebcfd798a6b94bb17f83f19f3fb53d 119 PRINTS PR00607 Class IE cytochrome C signature 90 102 1.1E-15 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 R615_RS01150 48ebcfd798a6b94bb17f83f19f3fb53d 119 PRINTS PR00607 Class IE cytochrome C signature 51 62 1.1E-15 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 R615_RS01150 48ebcfd798a6b94bb17f83f19f3fb53d 119 PRINTS PR00607 Class IE cytochrome C signature 62 72 1.1E-15 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 R615_RS01150 48ebcfd798a6b94bb17f83f19f3fb53d 119 PANTHER PTHR40942 3 118 6.9E-30 T 22-04-2016 R615_RS01150 48ebcfd798a6b94bb17f83f19f3fb53d 119 PANTHER PTHR40942:SF1 3 118 6.9E-30 T 22-04-2016 R615_RS01150 48ebcfd798a6b94bb17f83f19f3fb53d 119 Gene3D G3DSA:1.10.760.10 40 116 3.3E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS01150 48ebcfd798a6b94bb17f83f19f3fb53d 119 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 40 115 6.4E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 Gene3D G3DSA:3.20.20.10 36 265 8.3E-81 T 22-04-2016 IPR029066 PLP-binding barrel R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 225 241 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 412 40.952 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 SUPERFAMILY SSF51419 26 282 5.52E-78 T 22-04-2016 IPR029066 PLP-binding barrel R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 PANTHER PTHR11482:SF5 1 415 1.6E-174 T 22-04-2016 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 Gene3D G3DSA:2.40.37.10 266 413 8.1E-48 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 2.1E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 369 382 2.1E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 2.1E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 2.1E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 2.1E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 SUPERFAMILY SSF50621 253 412 3.56E-54 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 PANTHER PTHR11482 1 415 1.6E-174 T 22-04-2016 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 379 401 6.0E-31 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 6.0E-31 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 6.0E-31 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 6.0E-31 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 287 389 2.1E-18 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 47 281 8.1E-70 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 R615_RS01175 c9e1fb4ad58f011b3a19904b34d121b7 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 411 2.7E-156 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS03235 664251d57147b64e07700ad2ac14eb45 315 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 1.9E-102 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 R615_RS03235 664251d57147b64e07700ad2ac14eb45 315 PANTHER PTHR30426 1 312 4.1E-161 T 22-04-2016 R615_RS03235 664251d57147b64e07700ad2ac14eb45 315 Pfam PF02401 LytB protein 3 283 3.9E-96 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 R615_RS03235 664251d57147b64e07700ad2ac14eb45 315 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 38.623 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 R615_RS02420 021562840666a423c845b44509a60e86 506 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 18 217 1.6E-41 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 R615_RS02420 021562840666a423c845b44509a60e86 506 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 242 505 4.6E-69 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 R615_RS02420 021562840666a423c845b44509a60e86 506 Pfam PF01256 Carbohydrate kinase 259 500 4.3E-61 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 R615_RS02420 021562840666a423c845b44509a60e86 506 PANTHER PTHR12592:SF0 4 505 9.5E-130 T 22-04-2016 R615_RS02420 021562840666a423c845b44509a60e86 506 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 236 506 22.19 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 R615_RS02420 021562840666a423c845b44509a60e86 506 Gene3D G3DSA:3.40.50.10260 14 248 4.0E-58 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 R615_RS02420 021562840666a423c845b44509a60e86 506 SUPERFAMILY SSF53613 241 505 8.89E-76 T 22-04-2016 IPR029056 Ribokinase-like R615_RS02420 021562840666a423c845b44509a60e86 506 SUPERFAMILY SSF64153 15 258 6.67E-56 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 R615_RS02420 021562840666a423c845b44509a60e86 506 PANTHER PTHR12592 4 505 9.5E-130 T 22-04-2016 R615_RS02420 021562840666a423c845b44509a60e86 506 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 445 455 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site R615_RS02420 021562840666a423c845b44509a60e86 506 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 17 218 22.088 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 R615_RS02420 021562840666a423c845b44509a60e86 506 Gene3D G3DSA:3.40.1190.20 249 505 2.4E-86 T 22-04-2016 IPR029056 Ribokinase-like R615_RS02420 021562840666a423c845b44509a60e86 506 Pfam PF03853 YjeF-related protein N-terminus 38 197 4.6E-42 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 R615_RS02420 021562840666a423c845b44509a60e86 506 PIRSF PIRSF017184 13 506 6.3E-125 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 R615_RS15385 7c64c28f97e2402013902cfc82cf5d8c 926 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 526 800 1.2E-11 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase R615_RS15385 7c64c28f97e2402013902cfc82cf5d8c 926 SUPERFAMILY SSF56219 782 811 8.06E-30 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase R615_RS15385 7c64c28f97e2402013902cfc82cf5d8c 926 SUPERFAMILY SSF56219 472 749 8.06E-30 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase R615_RS15385 7c64c28f97e2402013902cfc82cf5d8c 926 PANTHER PTHR11371:SF31 162 818 2.7E-152 T 22-04-2016 R615_RS15385 7c64c28f97e2402013902cfc82cf5d8c 926 PANTHER PTHR11371 162 818 2.7E-152 T 22-04-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 R615_RS15385 7c64c28f97e2402013902cfc82cf5d8c 926 Gene3D G3DSA:3.60.10.10 522 808 3.7E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase R615_RS02090 b7e00b60ae2a984d15ef6919489b618d 197 Pfam PF03968 OstA-like protein 43 155 3.3E-25 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal R615_RS02090 b7e00b60ae2a984d15ef6919489b618d 197 PANTHER PTHR36504 6 195 1.3E-32 T 22-04-2016 R615_RS02090 b7e00b60ae2a984d15ef6919489b618d 197 Gene3D G3DSA:2.60.450.10 33 166 1.6E-31 T 22-04-2016 R615_RS02090 b7e00b60ae2a984d15ef6919489b618d 197 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 16 188 22.646 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 R615_RS02090 b7e00b60ae2a984d15ef6919489b618d 197 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 33 188 3.8E-40 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 R615_RS08960 d2dbcb6e585059440315e44e80a0348a 91 PANTHER PTHR33677 1 91 5.3E-28 T 22-04-2016 R615_RS08960 d2dbcb6e585059440315e44e80a0348a 91 Pfam PF02583 Metal-sensitive transcriptional repressor 8 87 2.1E-20 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 R615_RS01055 8b69671b9dd93ad996e6118e6132fbc2 550 PANTHER PTHR10566 6 502 1.6E-237 T 22-04-2016 R615_RS01055 8b69671b9dd93ad996e6118e6132fbc2 550 PANTHER PTHR10566:SF79 6 502 1.6E-237 T 22-04-2016 R615_RS01055 8b69671b9dd93ad996e6118e6132fbc2 550 Gene3D G3DSA:3.90.1200.10 254 301 2.1E-4 T 22-04-2016 R615_RS01055 8b69671b9dd93ad996e6118e6132fbc2 550 Pfam PF03109 ABC1 family 111 234 2.8E-33 T 22-04-2016 IPR004147 UbiB domain R615_RS01055 8b69671b9dd93ad996e6118e6132fbc2 550 SUPERFAMILY SSF56112 93 161 8.64E-43 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS01055 8b69671b9dd93ad996e6118e6132fbc2 550 SUPERFAMILY SSF56112 201 439 8.64E-43 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS01055 8b69671b9dd93ad996e6118e6132fbc2 550 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 448 5.4E-172 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 R615_RS01055 8b69671b9dd93ad996e6118e6132fbc2 550 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 549 51.707 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 R615_RS17640 107f299807b18a8e6693535913b087ea 187 PANTHER PTHR30055 2 186 4.4E-35 T 22-04-2016 R615_RS17640 107f299807b18a8e6693535913b087ea 187 PANTHER PTHR30055:SF82 2 186 4.4E-35 T 22-04-2016 R615_RS17640 107f299807b18a8e6693535913b087ea 187 SUPERFAMILY SSF48498 74 185 7.53E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal R615_RS17640 107f299807b18a8e6693535913b087ea 187 Gene3D G3DSA:1.10.357.10 2 181 2.3E-29 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS17640 107f299807b18a8e6693535913b087ea 187 SUPERFAMILY SSF46689 2 78 4.99E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS17640 107f299807b18a8e6693535913b087ea 187 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 77 186 6.8E-12 T 22-04-2016 IPR032551 HTH-type transcriptional repressor, C-terminal R615_RS17640 107f299807b18a8e6693535913b087ea 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 5.3E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS17640 107f299807b18a8e6693535913b087ea 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 5.9E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS17640 107f299807b18a8e6693535913b087ea 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 5.9E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS11485 9d9351f14792cabe6ff48c70a31dc2a0 350 PANTHER PTHR11019:SF52 216 341 3.1E-29 T 22-04-2016 R615_RS11485 9d9351f14792cabe6ff48c70a31dc2a0 350 SMART SM00342 251 333 2.4E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS11485 9d9351f14792cabe6ff48c70a31dc2a0 350 SUPERFAMILY SSF46689 287 338 6.27E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS11485 9d9351f14792cabe6ff48c70a31dc2a0 350 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 206 8.4E-37 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS11485 9d9351f14792cabe6ff48c70a31dc2a0 350 Gene3D G3DSA:1.10.10.60 287 337 9.7E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS11485 9d9351f14792cabe6ff48c70a31dc2a0 350 Pfam PF12833 Helix-turn-helix domain 258 334 4.0E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS11485 9d9351f14792cabe6ff48c70a31dc2a0 350 PANTHER PTHR11019 216 341 3.1E-29 T 22-04-2016 R615_RS01780 c69a77850620771939388b283e59dd09 628 SUPERFAMILY SSF69255 372 455 7.32E-22 T 22-04-2016 R615_RS01780 c69a77850620771939388b283e59dd09 628 SUPERFAMILY SSF69279 205 365 3.23E-11 T 22-04-2016 R615_RS01780 c69a77850620771939388b283e59dd09 628 Pfam PF05954 Phage late control gene D protein (GPD) 31 341 4.2E-70 T 22-04-2016 R615_RS01780 c69a77850620771939388b283e59dd09 628 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 520 2.2E-129 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset R615_RS01780 c69a77850620771939388b283e59dd09 628 SUPERFAMILY SSF69279 12 189 9.78E-53 T 22-04-2016 R615_RS01780 c69a77850620771939388b283e59dd09 628 SUPERFAMILY SSF69349 445 607 2.75E-28 T 22-04-2016 R615_RS01780 c69a77850620771939388b283e59dd09 628 Gene3D G3DSA:3.55.50.10 101 192 1.3E-30 T 22-04-2016 R615_RS01780 c69a77850620771939388b283e59dd09 628 PANTHER PTHR32305:SF7 1 621 1.4E-77 T 22-04-2016 R615_RS01780 c69a77850620771939388b283e59dd09 628 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 23 502 6.0E-91 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein R615_RS01780 c69a77850620771939388b283e59dd09 628 PANTHER PTHR32305 1 621 1.4E-77 T 22-04-2016 R615_RS01780 c69a77850620771939388b283e59dd09 628 Gene3D G3DSA:2.40.50.230 376 455 8.0E-25 T 22-04-2016 IPR006531 Gp5 N-terminal R615_RS15125 9431092c936d065e182621698fba326d 277 PANTHER PTHR21621:SF2 85 276 4.0E-15 T 22-04-2016 R615_RS15125 9431092c936d065e182621698fba326d 277 Gene3D G3DSA:3.30.470.20 140 227 2.7E-11 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS15125 9431092c936d065e182621698fba326d 277 Pfam PF08443 RimK-like ATP-grasp domain 74 235 3.3E-13 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type R615_RS15125 9431092c936d065e182621698fba326d 277 PANTHER PTHR21621 85 276 4.0E-15 T 22-04-2016 R615_RS15125 9431092c936d065e182621698fba326d 277 SUPERFAMILY SSF56059 80 229 1.23E-23 T 22-04-2016 R615_RS11015 2406789e2a567747ef69e145ff3cf745 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 8 32 - T 22-04-2016 IPR001455 TusA-like domain R615_RS11015 2406789e2a567747ef69e145ff3cf745 81 SUPERFAMILY SSF64307 3 75 4.32E-23 T 22-04-2016 IPR001455 TusA-like domain R615_RS11015 2406789e2a567747ef69e145ff3cf745 81 Gene3D G3DSA:3.30.110.40 4 76 1.1E-26 T 22-04-2016 IPR001455 TusA-like domain R615_RS11015 2406789e2a567747ef69e145ff3cf745 81 Pfam PF01206 Sulfurtransferase TusA 7 75 1.1E-23 T 22-04-2016 IPR001455 TusA-like domain R615_RS11015 2406789e2a567747ef69e145ff3cf745 81 PANTHER PTHR33279:SF5 4 81 6.4E-26 T 22-04-2016 R615_RS11015 2406789e2a567747ef69e145ff3cf745 81 PANTHER PTHR33279 4 81 6.4E-26 T 22-04-2016 R615_RS08180 c21874012708cce3f611d89d36c57c24 90 SMART SM00411 1 90 1.4E-42 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS08180 c21874012708cce3f611d89d36c57c24 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.9E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS08180 c21874012708cce3f611d89d36c57c24 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.9E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS08180 c21874012708cce3f611d89d36c57c24 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.9E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS08180 c21874012708cce3f611d89d36c57c24 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 5.9E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS08180 c21874012708cce3f611d89d36c57c24 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 R615_RS08180 c21874012708cce3f611d89d36c57c24 90 Gene3D G3DSA:4.10.520.10 1 90 1.1E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 R615_RS08180 c21874012708cce3f611d89d36c57c24 90 SUPERFAMILY SSF47729 1 90 4.86E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 R615_RS08180 c21874012708cce3f611d89d36c57c24 90 PANTHER PTHR33175 1 90 5.8E-45 T 22-04-2016 R615_RS00865 6526b2461ee319fc5e68b5cc8d199958 77 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.62 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS00865 6526b2461ee319fc5e68b5cc8d199958 77 Gene3D G3DSA:3.90.940.10 1 71 1.6E-18 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS00865 6526b2461ee319fc5e68b5cc8d199958 77 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 9.1E-27 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS00865 6526b2461ee319fc5e68b5cc8d199958 77 SUPERFAMILY SSF63562 1 71 1.31E-24 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS00865 6526b2461ee319fc5e68b5cc8d199958 77 Pfam PF01192 RNA polymerase Rpb6 8 60 1.2E-18 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS00865 6526b2461ee319fc5e68b5cc8d199958 77 SMART SM01409 8 61 1.0E-18 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS00865 6526b2461ee319fc5e68b5cc8d199958 77 PANTHER PTHR34476 2 76 5.9E-25 T 22-04-2016 R615_RS12030 e0f6da16e284d5dc6ecc6caa666a3db7 392 Gene3D G3DSA:3.40.50.2300 61 214 4.6E-8 T 22-04-2016 R615_RS12030 e0f6da16e284d5dc6ecc6caa666a3db7 392 SUPERFAMILY SSF53822 62 353 7.06E-17 T 22-04-2016 IPR028082 Periplasmic binding protein-like I R615_RS12030 e0f6da16e284d5dc6ecc6caa666a3db7 392 Pfam PF13433 Periplasmic binding protein domain 28 361 1.4E-22 T 22-04-2016 R615_RS04695 cc0eecf6075e253910535be2c8f73afb 204 PANTHER PTHR11055 3 192 4.0E-128 T 22-04-2016 R615_RS04695 cc0eecf6075e253910535be2c8f73afb 204 Pfam PF01583 Adenylylsulphate kinase 25 178 2.0E-73 T 22-04-2016 R615_RS04695 cc0eecf6075e253910535be2c8f73afb 204 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 196 38.716 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 R615_RS04695 cc0eecf6075e253910535be2c8f73afb 204 SUPERFAMILY SSF52540 21 195 1.49E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04695 cc0eecf6075e253910535be2c8f73afb 204 Gene3D G3DSA:3.40.50.300 4 201 3.4E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04695 cc0eecf6075e253910535be2c8f73afb 204 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 8 190 7.4E-84 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 R615_RS02545 99097a4e1d41b8a4cf35355925bc8ff5 286 Gene3D G3DSA:3.30.1300.10 181 281 2.9E-28 T 22-04-2016 R615_RS02545 99097a4e1d41b8a4cf35355925bc8ff5 286 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 279 1.1E-100 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 R615_RS02545 99097a4e1d41b8a4cf35355925bc8ff5 286 PANTHER PTHR21299 1 284 3.0E-124 T 22-04-2016 R615_RS02545 99097a4e1d41b8a4cf35355925bc8ff5 286 SUPERFAMILY SSF52374 1 282 1.2E-102 T 22-04-2016 R615_RS02545 99097a4e1d41b8a4cf35355925bc8ff5 286 Gene3D G3DSA:3.40.50.620 1 176 4.0E-74 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS02545 99097a4e1d41b8a4cf35355925bc8ff5 286 Pfam PF02569 Pantoate-beta-alanine ligase 4 277 4.8E-101 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 R615_RS02545 99097a4e1d41b8a4cf35355925bc8ff5 286 PANTHER PTHR21299:SF1 1 284 3.0E-124 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 R615_RS02545 99097a4e1d41b8a4cf35355925bc8ff5 286 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 68 1.1E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 R615_RS02545 99097a4e1d41b8a4cf35355925bc8ff5 286 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 38.747 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 R615_RS09980 4ca49b92391629d2476dd73985d76ded 205 SMART SM00448 15 126 8.1E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS09980 4ca49b92391629d2476dd73985d76ded 205 Gene3D G3DSA:3.40.50.2300 12 136 1.0E-22 T 22-04-2016 R615_RS09980 4ca49b92391629d2476dd73985d76ded 205 SUPERFAMILY SSF52172 13 197 1.42E-53 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS09980 4ca49b92391629d2476dd73985d76ded 205 Pfam PF03861 ANTAR domain 145 197 2.5E-16 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 R615_RS09980 4ca49b92391629d2476dd73985d76ded 205 SMART SM01012 142 197 6.0E-20 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 R615_RS09980 4ca49b92391629d2476dd73985d76ded 205 PANTHER PTHR26402 15 199 4.2E-50 T 22-04-2016 R615_RS09980 4ca49b92391629d2476dd73985d76ded 205 PANTHER PTHR26402:SF567 15 199 4.2E-50 T 22-04-2016 R615_RS09980 4ca49b92391629d2476dd73985d76ded 205 Gene3D G3DSA:1.10.10.10 145 203 5.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS09980 4ca49b92391629d2476dd73985d76ded 205 Pfam PF00072 Response regulator receiver domain 17 122 6.3E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS09980 4ca49b92391629d2476dd73985d76ded 205 PIRSF PIRSF036382 6 204 8.0E-66 T 22-04-2016 IPR008327 Signal transduction response regulator, antiterminator R615_RS01250 950da1af1af559414ce18a3a0a31efcf 366 SUPERFAMILY SSF52738 151 337 3.27E-38 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS01250 950da1af1af559414ce18a3a0a31efcf 366 Gene3D G3DSA:3.40.50.180 149 337 1.5E-39 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS01250 950da1af1af559414ce18a3a0a31efcf 366 PANTHER PTHR24421:SF21 154 352 5.4E-31 T 22-04-2016 R615_RS01250 950da1af1af559414ce18a3a0a31efcf 366 Pfam PF01339 CheB methylesterase 156 330 1.8E-35 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS01250 950da1af1af559414ce18a3a0a31efcf 366 PANTHER PTHR24421 154 352 5.4E-31 T 22-04-2016 R615_RS13115 93be0a066454b9545d0e5c3a2f9c0f3e 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 181 344 1.2E-41 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS13115 93be0a066454b9545d0e5c3a2f9c0f3e 356 Gene3D G3DSA:3.40.50.2000 2 192 4.0E-66 T 22-04-2016 R615_RS13115 93be0a066454b9545d0e5c3a2f9c0f3e 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 353 35.986 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS13115 93be0a066454b9545d0e5c3a2f9c0f3e 356 Gene3D G3DSA:3.40.50.2000 251 334 5.0E-4 T 22-04-2016 R615_RS13115 93be0a066454b9545d0e5c3a2f9c0f3e 356 PANTHER PTHR21015 5 356 1.7E-114 T 22-04-2016 R615_RS13115 93be0a066454b9545d0e5c3a2f9c0f3e 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 142 1.1E-40 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS13115 93be0a066454b9545d0e5c3a2f9c0f3e 356 SUPERFAMILY SSF53756 4 354 7.39E-118 T 22-04-2016 R615_RS13115 93be0a066454b9545d0e5c3a2f9c0f3e 356 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 349 1.3E-106 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 R615_RS13115 93be0a066454b9545d0e5c3a2f9c0f3e 356 PANTHER PTHR21015:SF22 5 356 1.7E-114 T 22-04-2016 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.2E-93 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 SUPERFAMILY SSF54849 137 204 1.4E-24 T 22-04-2016 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 Gene3D G3DSA:3.50.7.10 188 366 6.0E-99 T 22-04-2016 IPR027409 GroEL-like apical domain R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 SUPERFAMILY SSF52029 184 376 2.99E-84 T 22-04-2016 IPR027409 GroEL-like apical domain R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 Gene3D G3DSA:1.10.560.10 367 517 4.2E-41 T 22-04-2016 IPR027413 GroEL-like equatorial domain R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 Gene3D G3DSA:1.10.560.10 3 187 2.5E-46 T 22-04-2016 IPR027413 GroEL-like equatorial domain R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.612 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 PRINTS PR00298 60kDa chaperonin signature 27 53 2.0E-73 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 PRINTS PR00298 60kDa chaperonin signature 398 419 2.0E-73 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 PRINTS PR00298 60kDa chaperonin signature 350 375 2.0E-73 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 PRINTS PR00298 60kDa chaperonin signature 83 110 2.0E-73 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 PRINTS PR00298 60kDa chaperonin signature 268 291 2.0E-73 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 PANTHER PTHR11353 2 547 8.5E-252 T 22-04-2016 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 525 4.6E-252 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 SUPERFAMILY SSF48592 406 520 2.75E-75 T 22-04-2016 R615_RS13495 7db713a0af482f9b29a7e9502809f5b5 547 SUPERFAMILY SSF48592 7 134 2.75E-75 T 22-04-2016 R615_RS03230 4bf2fa8cf0285e6d85b5c1f10e218f9a 147 PANTHER PTHR10516 133 146 3.0E-12 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type R615_RS03230 4bf2fa8cf0285e6d85b5c1f10e218f9a 147 PANTHER PTHR10516 6 91 3.0E-12 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type R615_RS03230 4bf2fa8cf0285e6d85b5c1f10e218f9a 147 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 141 2.1E-16 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 R615_RS03230 4bf2fa8cf0285e6d85b5c1f10e218f9a 147 Gene3D G3DSA:3.10.50.40 126 144 5.3E-20 T 22-04-2016 R615_RS03230 4bf2fa8cf0285e6d85b5c1f10e218f9a 147 Gene3D G3DSA:3.10.50.40 6 72 5.3E-20 T 22-04-2016 R615_RS03230 4bf2fa8cf0285e6d85b5c1f10e218f9a 147 PANTHER PTHR10516:SF329 133 146 3.0E-12 T 22-04-2016 R615_RS03230 4bf2fa8cf0285e6d85b5c1f10e218f9a 147 PANTHER PTHR10516:SF329 6 91 3.0E-12 T 22-04-2016 R615_RS03230 4bf2fa8cf0285e6d85b5c1f10e218f9a 147 SUPERFAMILY SSF54534 6 144 1.67E-36 T 22-04-2016 R615_RS01800 984ea0126da6db0bdbb7f6508cf7e351 683 PANTHER PTHR34597 74 636 2.4E-43 T 22-04-2016 R615_RS01800 984ea0126da6db0bdbb7f6508cf7e351 683 Pfam PF08479 POTRA domain, ShlB-type 185 237 4.0E-11 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type R615_RS01800 984ea0126da6db0bdbb7f6508cf7e351 683 Gene3D G3DSA:2.40.160.50 271 654 1.5E-36 T 22-04-2016 R615_RS01800 984ea0126da6db0bdbb7f6508cf7e351 683 Gene3D G3DSA:3.10.20.310 180 237 1.8E-8 T 22-04-2016 R615_RS03025 bfe9bb2104456257fe17ef3bc9ccf793 232 Pfam PF02954 Bacterial regulatory protein, Fis family 195 227 2.4E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS03025 bfe9bb2104456257fe17ef3bc9ccf793 232 Gene3D G3DSA:1.10.10.60 195 226 4.4E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS03025 bfe9bb2104456257fe17ef3bc9ccf793 232 SUPERFAMILY SSF55781 38 169 3.24E-8 T 22-04-2016 IPR029016 GAF domain-like R615_RS03025 bfe9bb2104456257fe17ef3bc9ccf793 232 Gene3D G3DSA:3.30.450.40 26 168 1.3E-5 T 22-04-2016 IPR029016 GAF domain-like R615_RS03025 bfe9bb2104456257fe17ef3bc9ccf793 232 SUPERFAMILY SSF46689 179 227 8.06E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS03025 bfe9bb2104456257fe17ef3bc9ccf793 232 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 210 230 2.2E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS03025 bfe9bb2104456257fe17ef3bc9ccf793 232 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 193 210 2.2E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS16595 dbe5efe6aa8e883bba82e2613fc9fc53 104 SUPERFAMILY SSF102829 9 98 1.03E-19 T 22-04-2016 IPR007838 Cell division protein ZapA-like R615_RS16595 dbe5efe6aa8e883bba82e2613fc9fc53 104 Pfam PF05164 Cell division protein ZapA 10 91 2.5E-18 T 22-04-2016 IPR007838 Cell division protein ZapA-like R615_RS16595 dbe5efe6aa8e883bba82e2613fc9fc53 104 PANTHER PTHR34981:SF1 6 94 3.1E-13 T 22-04-2016 R615_RS16595 dbe5efe6aa8e883bba82e2613fc9fc53 104 PANTHER PTHR34981 6 94 3.1E-13 T 22-04-2016 R615_RS00475 0cc061265b8fa0c6c56ef18ddeb75eb8 262 Gene3D G3DSA:3.40.50.1820 5 254 7.6E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS00475 0cc061265b8fa0c6c56ef18ddeb75eb8 262 Pfam PF12697 Alpha/beta hydrolase family 9 236 7.2E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS00475 0cc061265b8fa0c6c56ef18ddeb75eb8 262 SUPERFAMILY SSF53474 6 254 8.79E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS00475 0cc061265b8fa0c6c56ef18ddeb75eb8 262 PANTHER PTHR10992 57 255 2.7E-19 T 22-04-2016 R615_RS00475 0cc061265b8fa0c6c56ef18ddeb75eb8 262 PANTHER PTHR10992 6 39 2.7E-19 T 22-04-2016 R615_RS05455 0111b24a292ce3badd45b51c1a7f8345 251 Gene3D G3DSA:3.90.226.10 1 248 2.1E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS05455 0111b24a292ce3badd45b51c1a7f8345 251 PANTHER PTHR11941 1 240 1.4E-55 T 22-04-2016 R615_RS05455 0111b24a292ce3badd45b51c1a7f8345 251 SUPERFAMILY SSF52096 1 248 1.82E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS05455 0111b24a292ce3badd45b51c1a7f8345 251 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 241 3.3E-42 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 R615_RS14235 cdbbe2bf8f8e8cf4d51a453bd532a436 66 Gene3D G3DSA:1.10.10.60 10 58 1.2E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS14235 cdbbe2bf8f8e8cf4d51a453bd532a436 66 SMART SM00342 2 55 4.1E-4 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS14235 cdbbe2bf8f8e8cf4d51a453bd532a436 66 SUPERFAMILY SSF46689 10 59 2.69E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS14235 cdbbe2bf8f8e8cf4d51a453bd532a436 66 Pfam PF12833 Helix-turn-helix domain 8 56 1.3E-13 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS14235 cdbbe2bf8f8e8cf4d51a453bd532a436 66 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 24 39 1.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS14235 cdbbe2bf8f8e8cf4d51a453bd532a436 66 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 39 55 1.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS14235 cdbbe2bf8f8e8cf4d51a453bd532a436 66 PANTHER PTHR11019 10 63 1.2E-14 T 22-04-2016 R615_RS17025 d4de78160a4f901da650f0a92e7c6a17 220 Gene3D G3DSA:3.90.10.10 192 204 4.9E-4 T 22-04-2016 R615_RS17025 d4de78160a4f901da650f0a92e7c6a17 220 Gene3D G3DSA:3.90.10.10 80 143 4.9E-4 T 22-04-2016 R615_RS17025 d4de78160a4f901da650f0a92e7c6a17 220 SUPERFAMILY SSF48695 89 205 5.44E-6 T 22-04-2016 IPR011031 Multihaem cytochrome R615_RS17025 d4de78160a4f901da650f0a92e7c6a17 220 Pfam PF09626 Dihaem cytochrome c 89 205 5.5E-38 T 22-04-2016 IPR018588 Dihaem cytochrome c R615_RS05135 1ecb0df0937fcbd91bfe8cbec6908b17 260 SUPERFAMILY SSF52540 2 252 2.31E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05135 1ecb0df0937fcbd91bfe8cbec6908b17 260 Pfam PF13614 AAA domain 2 180 3.5E-44 T 22-04-2016 IPR025669 AAA domain R615_RS05135 1ecb0df0937fcbd91bfe8cbec6908b17 260 PANTHER PTHR13696 2 252 5.6E-118 T 22-04-2016 R615_RS05135 1ecb0df0937fcbd91bfe8cbec6908b17 260 PANTHER PTHR13696:SF69 2 252 5.6E-118 T 22-04-2016 R615_RS05135 1ecb0df0937fcbd91bfe8cbec6908b17 260 Gene3D G3DSA:3.40.50.300 2 252 3.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07470 ef600c707a4f6630fee10f0d64b46820 103 PIRSF PIRSF003113 1 98 7.9E-33 T 22-04-2016 IPR002634 BolA protein R615_RS07470 ef600c707a4f6630fee10f0d64b46820 103 PANTHER PTHR12735 1 102 1.7E-37 T 22-04-2016 R615_RS07470 ef600c707a4f6630fee10f0d64b46820 103 Gene3D G3DSA:3.30.300.90 3 100 1.3E-30 T 22-04-2016 IPR002634 BolA protein R615_RS07470 ef600c707a4f6630fee10f0d64b46820 103 PANTHER PTHR12735:SF23 1 102 1.7E-37 T 22-04-2016 R615_RS07470 ef600c707a4f6630fee10f0d64b46820 103 Pfam PF01722 BolA-like protein 14 83 1.9E-27 T 22-04-2016 IPR002634 BolA protein R615_RS07470 ef600c707a4f6630fee10f0d64b46820 103 SUPERFAMILY SSF82657 2 87 2.35E-28 T 22-04-2016 IPR002634 BolA protein R615_RS15250 58b8748f6c6f1d63a36fd94e0f38f7ef 334 SUPERFAMILY SSF56281 30 296 2.88E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS15250 58b8748f6c6f1d63a36fd94e0f38f7ef 334 Pfam PF02112 cAMP phosphodiesterases class-II 29 329 1.3E-46 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 R615_RS15250 58b8748f6c6f1d63a36fd94e0f38f7ef 334 PANTHER PTHR28283 22 334 7.3E-57 T 22-04-2016 R615_RS15250 58b8748f6c6f1d63a36fd94e0f38f7ef 334 PANTHER PTHR28283:SF1 22 334 7.3E-57 T 22-04-2016 R615_RS15250 58b8748f6c6f1d63a36fd94e0f38f7ef 334 PIRSF PIRSF000962 13 334 1.3E-75 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 R615_RS15250 58b8748f6c6f1d63a36fd94e0f38f7ef 334 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 126 147 1.8E-22 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 R615_RS15250 58b8748f6c6f1d63a36fd94e0f38f7ef 334 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 284 295 1.8E-22 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 R615_RS15250 58b8748f6c6f1d63a36fd94e0f38f7ef 334 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 236 247 1.8E-22 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 R615_RS15250 58b8748f6c6f1d63a36fd94e0f38f7ef 334 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 99 117 1.8E-22 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 R615_RS15250 58b8748f6c6f1d63a36fd94e0f38f7ef 334 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 255 268 1.8E-22 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 R615_RS15250 58b8748f6c6f1d63a36fd94e0f38f7ef 334 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 103 117 - T 22-04-2016 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 R615_RS15250 58b8748f6c6f1d63a36fd94e0f38f7ef 334 Gene3D G3DSA:3.60.15.10 36 296 9.4E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS06965 551b248fe36db92258b2a2bf4d612ce6 283 PANTHER PTHR21022 2 274 8.6E-89 T 22-04-2016 R615_RS06965 551b248fe36db92258b2a2bf4d612ce6 283 SUPERFAMILY SSF55021 186 274 3.62E-21 T 22-04-2016 R615_RS06965 551b248fe36db92258b2a2bf4d612ce6 283 Pfam PF00800 Prephenate dehydratase 5 181 4.3E-51 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 R615_RS06965 551b248fe36db92258b2a2bf4d612ce6 283 PIRSF PIRSF001500 2 276 3.4E-64 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 R615_RS06965 551b248fe36db92258b2a2bf4d612ce6 283 Gene3D G3DSA:3.40.190.10 89 167 1.4E-27 T 22-04-2016 R615_RS06965 551b248fe36db92258b2a2bf4d612ce6 283 Gene3D G3DSA:3.40.190.10 2 88 5.3E-26 T 22-04-2016 R615_RS06965 551b248fe36db92258b2a2bf4d612ce6 283 Gene3D G3DSA:3.30.70.260 189 274 4.6E-25 T 22-04-2016 R615_RS06965 551b248fe36db92258b2a2bf4d612ce6 283 SUPERFAMILY SSF53850 4 181 6.08E-54 T 22-04-2016 R615_RS11815 3552c5fed9b5c4ad5971584dad93b105 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 3.3E-56 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11815 3552c5fed9b5c4ad5971584dad93b105 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 3.3E-56 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11815 3552c5fed9b5c4ad5971584dad93b105 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 3.3E-56 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11815 3552c5fed9b5c4ad5971584dad93b105 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 157 176 3.3E-56 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11815 3552c5fed9b5c4ad5971584dad93b105 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 3.3E-56 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11815 3552c5fed9b5c4ad5971584dad93b105 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 3.3E-56 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11815 3552c5fed9b5c4ad5971584dad93b105 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 217 4.3E-74 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria R615_RS11815 3552c5fed9b5c4ad5971584dad93b105 222 Pfam PF03379 CcmB protein 7 217 8.0E-74 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11815 3552c5fed9b5c4ad5971584dad93b105 222 PANTHER PTHR30070:SF1 1 221 1.6E-57 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11815 3552c5fed9b5c4ad5971584dad93b105 222 PIRSF PIRSF002764 1 221 2.1E-77 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria R615_RS11815 3552c5fed9b5c4ad5971584dad93b105 222 PANTHER PTHR30070 1 221 1.6E-57 T 22-04-2016 R615_RS17340 6cd60535da3504ed351a7213b5028595 383 Pfam PF13505 Outer membrane protein beta-barrel domain 12 178 1.4E-15 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel R615_RS17340 6cd60535da3504ed351a7213b5028595 383 Gene3D G3DSA:2.40.160.20 28 178 5.6E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS17340 6cd60535da3504ed351a7213b5028595 383 SUPERFAMILY SSF56925 27 179 5.49E-15 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS17340 6cd60535da3504ed351a7213b5028595 383 PANTHER PTHR30128 226 382 1.7E-41 T 22-04-2016 R615_RS17340 6cd60535da3504ed351a7213b5028595 383 SUPERFAMILY SSF103647 239 273 5.75E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17340 6cd60535da3504ed351a7213b5028595 383 PRINTS PR01021 OMPA domain signature 282 304 1.6E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 R615_RS17340 6cd60535da3504ed351a7213b5028595 383 PRINTS PR01021 OMPA domain signature 327 343 1.6E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 R615_RS17340 6cd60535da3504ed351a7213b5028595 383 PRINTS PR01021 OMPA domain signature 312 327 1.6E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 R615_RS17340 6cd60535da3504ed351a7213b5028595 383 Gene3D G3DSA:3.30.1330.60 263 382 4.1E-36 T 22-04-2016 IPR006665 OmpA-like domain R615_RS17340 6cd60535da3504ed351a7213b5028595 383 Pfam PF00691 OmpA family 281 376 5.5E-23 T 22-04-2016 IPR006665 OmpA-like domain R615_RS17340 6cd60535da3504ed351a7213b5028595 383 SUPERFAMILY SSF103088 274 380 1.19E-33 T 22-04-2016 IPR006665 OmpA-like domain R615_RS15780 8941602221640a76e415a8ecfbe1b016 144 Gene3D G3DSA:3.100.10.10 32 143 2.1E-25 T 22-04-2016 R615_RS15780 8941602221640a76e415a8ecfbe1b016 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 9.0E-49 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 R615_RS15780 8941602221640a76e415a8ecfbe1b016 144 PANTHER PTHR12934 1 143 8.6E-66 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 R615_RS15780 8941602221640a76e415a8ecfbe1b016 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15780 8941602221640a76e415a8ecfbe1b016 144 SUPERFAMILY SSF52080 4 143 2.88E-45 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P R615_RS15780 8941602221640a76e415a8ecfbe1b016 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.6E-31 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P R615_RS15780 8941602221640a76e415a8ecfbe1b016 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 19.086 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 R615_RS03770 f3f50bda67ee23c62f3876c997d0263f 1114 Pfam PF04851 Type III restriction enzyme, res subunit 135 278 8.5E-8 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 R615_RS03770 f3f50bda67ee23c62f3876c997d0263f 1114 Gene3D G3DSA:3.40.50.300 154 300 2.8E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03770 f3f50bda67ee23c62f3876c997d0263f 1114 SUPERFAMILY SSF52540 154 300 1.06E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04910 73de012d66fd6ca1529ce5f5a1066a77 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 3.3E-10 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain R615_RS04910 73de012d66fd6ca1529ce5f5a1066a77 64 PANTHER PTHR37424:SF1 2 57 1.9E-12 T 22-04-2016 R615_RS04910 73de012d66fd6ca1529ce5f5a1066a77 64 PANTHER PTHR37424 2 57 1.9E-12 T 22-04-2016 R615_RS06360 674c0a30512e6c37cb14d7f3de506fc1 237 SUPERFAMILY SSF52540 33 189 1.22E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06360 674c0a30512e6c37cb14d7f3de506fc1 237 Gene3D G3DSA:3.40.50.300 30 222 4.7E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06360 674c0a30512e6c37cb14d7f3de506fc1 237 Pfam PF06414 Zeta toxin 28 212 2.8E-43 T 22-04-2016 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 R615_RS12495 966252516a941f2cc02ccfc6f9130991 123 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 2 96 4.0E-18 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 R615_RS12495 966252516a941f2cc02ccfc6f9130991 123 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 6 121 2.0E-17 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 R615_RS12495 966252516a941f2cc02ccfc6f9130991 123 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 120 7.6E-25 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 R615_RS12495 966252516a941f2cc02ccfc6f9130991 123 Gene3D G3DSA:3.90.470.20 1 121 2.3E-34 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 R615_RS12495 966252516a941f2cc02ccfc6f9130991 123 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 119 1.2E-32 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 R615_RS12495 966252516a941f2cc02ccfc6f9130991 123 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 123 22.003 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 R615_RS12495 966252516a941f2cc02ccfc6f9130991 123 SUPERFAMILY SSF56214 1 120 5.1E-26 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 R615_RS00585 b7e41077d65e89abe7953aaf8edf4245 422 PANTHER PTHR32039 73 422 9.6E-98 T 22-04-2016 R615_RS00585 b7e41077d65e89abe7953aaf8edf4245 422 Gene3D G3DSA:3.40.50.450 120 264 1.9E-12 T 22-04-2016 R615_RS00585 b7e41077d65e89abe7953aaf8edf4245 422 Pfam PF02481 DNA recombination-mediator protein A 82 285 7.6E-77 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 R615_RS00585 b7e41077d65e89abe7953aaf8edf4245 422 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 78 293 2.5E-75 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 R615_RS00585 b7e41077d65e89abe7953aaf8edf4245 422 SUPERFAMILY SSF102405 90 294 9.16E-44 T 22-04-2016 R615_RS00585 b7e41077d65e89abe7953aaf8edf4245 422 PANTHER PTHR32039:SF8 73 422 9.6E-98 T 22-04-2016 R615_RS10290 e364edf6edf24a24506f7632ea1c5448 237 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 212 26.706 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 R615_RS10290 e364edf6edf24a24506f7632ea1c5448 237 PANTHER PTHR30586 1 222 1.3E-117 T 22-04-2016 R615_RS10290 e364edf6edf24a24506f7632ea1c5448 237 PIRSF PIRSF006102 2 221 6.6E-75 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 R615_RS10290 e364edf6edf24a24506f7632ea1c5448 237 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 202 1.7E-63 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 R615_RS10290 e364edf6edf24a24506f7632ea1c5448 237 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 11 210 1.3E-80 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 R615_RS10290 e364edf6edf24a24506f7632ea1c5448 237 PANTHER PTHR30586:SF0 1 222 1.3E-117 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 R615_RS11830 8033bcbeddfeac6a03992eb8869c154b 94 PANTHER PTHR30531 9 94 6.2E-28 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 R615_RS11830 8033bcbeddfeac6a03992eb8869c154b 94 Gene3D G3DSA:3.40.1690.10 13 87 4.3E-23 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal R615_RS11830 8033bcbeddfeac6a03992eb8869c154b 94 Pfam PF01312 FlhB HrpN YscU SpaS Family 13 83 3.1E-17 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 R615_RS11830 8033bcbeddfeac6a03992eb8869c154b 94 SUPERFAMILY SSF160544 12 87 3.92E-21 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal R615_RS01185 f635ce9c5d533590475aae7941892ded 423 SUPERFAMILY SSF51556 57 366 8.45E-81 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS01185 f635ce9c5d533590475aae7941892ded 423 Pfam PF01979 Amidohydrolase family 54 420 1.5E-9 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 R615_RS01185 f635ce9c5d533590475aae7941892ded 423 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 421 1.4E-87 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS01185 f635ce9c5d533590475aae7941892ded 423 PANTHER PTHR11647 1 421 2.4E-122 T 22-04-2016 R615_RS01185 f635ce9c5d533590475aae7941892ded 423 Gene3D G3DSA:2.30.40.10 5 70 3.1E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS01185 f635ce9c5d533590475aae7941892ded 423 Gene3D G3DSA:3.20.20.140 71 386 4.5E-80 T 22-04-2016 R615_RS01185 f635ce9c5d533590475aae7941892ded 423 SUPERFAMILY SSF51338 4 56 5.94E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS01185 f635ce9c5d533590475aae7941892ded 423 SUPERFAMILY SSF51338 366 422 5.94E-19 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS01185 f635ce9c5d533590475aae7941892ded 423 PANTHER PTHR11647:SF70 1 421 2.4E-122 T 22-04-2016 R615_RS01515 e3f869ae4020e4b1f613c4f7f6729014 176 Gene3D G3DSA:3.40.50.2300 7 125 7.7E-25 T 22-04-2016 R615_RS01515 e3f869ae4020e4b1f613c4f7f6729014 176 SMART SM00448 6 115 2.4E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS01515 e3f869ae4020e4b1f613c4f7f6729014 176 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 155 175 2.6E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS01515 e3f869ae4020e4b1f613c4f7f6729014 176 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 138 155 2.6E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS01515 e3f869ae4020e4b1f613c4f7f6729014 176 Pfam PF02954 Bacterial regulatory protein, Fis family 132 172 2.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS01515 e3f869ae4020e4b1f613c4f7f6729014 176 Gene3D G3DSA:1.10.10.60 126 173 2.7E-28 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS01515 e3f869ae4020e4b1f613c4f7f6729014 176 Pfam PF00072 Response regulator receiver domain 9 114 1.8E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS01515 e3f869ae4020e4b1f613c4f7f6729014 176 SUPERFAMILY SSF52172 6 161 1.57E-25 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS01515 e3f869ae4020e4b1f613c4f7f6729014 176 PANTHER PTHR26402:SF344 6 143 6.2E-32 T 22-04-2016 R615_RS01515 e3f869ae4020e4b1f613c4f7f6729014 176 PANTHER PTHR26402 6 143 6.2E-32 T 22-04-2016 R615_RS03305 2e1dfeb7bc6f7208b174ce0584dfb9b4 273 Pfam PF13525 Outer membrane lipoprotein 26 231 7.5E-63 T 22-04-2016 R615_RS03305 2e1dfeb7bc6f7208b174ce0584dfb9b4 273 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 39.13 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD R615_RS03305 2e1dfeb7bc6f7208b174ce0584dfb9b4 273 SUPERFAMILY SSF48452 30 117 1.52E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS03305 2e1dfeb7bc6f7208b174ce0584dfb9b4 273 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 3 243 7.6E-76 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD R615_RS03305 2e1dfeb7bc6f7208b174ce0584dfb9b4 273 PANTHER PTHR37423 1 247 2.0E-78 T 22-04-2016 R615_RS14835 f7c2148f5fd78c5f9793117d793bb362 291 Gene3D G3DSA:1.10.600.10 4 290 8.5E-97 T 22-04-2016 IPR008949 Isoprenoid synthase domain R615_RS14835 f7c2148f5fd78c5f9793117d793bb362 291 Pfam PF00348 Polyprenyl synthetase 27 260 7.8E-60 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 R615_RS14835 f7c2148f5fd78c5f9793117d793bb362 291 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 R615_RS14835 f7c2148f5fd78c5f9793117d793bb362 291 SUPERFAMILY SSF48576 20 278 1.91E-86 T 22-04-2016 IPR008949 Isoprenoid synthase domain R615_RS14835 f7c2148f5fd78c5f9793117d793bb362 291 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 77 93 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 R615_RS03880 fa518c4662b99572cb8652973b20e28c 267 Pfam PF08223 PaaX-like protein C-terminal domain 90 234 3.0E-18 T 22-04-2016 IPR013225 PaaX-like, C-terminal UniPathway: UPA00930 R615_RS03880 fa518c4662b99572cb8652973b20e28c 267 PANTHER PTHR30319:SF1 1 234 7.3E-13 T 22-04-2016 R615_RS03880 fa518c4662b99572cb8652973b20e28c 267 PANTHER PTHR30319 1 234 7.3E-13 T 22-04-2016 R615_RS02255 5cae6632be409fe9f458408553e1ee8b 341 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 7 325 26.948 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS02255 5cae6632be409fe9f458408553e1ee8b 341 SUPERFAMILY SSF55120 8 323 3.6E-89 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS02255 5cae6632be409fe9f458408553e1ee8b 341 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 242 320 6.8E-5 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS02255 5cae6632be409fe9f458408553e1ee8b 341 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 15 186 3.5E-43 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS02255 5cae6632be409fe9f458408553e1ee8b 341 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 79 92 - T 22-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS02255 5cae6632be409fe9f458408553e1ee8b 341 PANTHER PTHR13326 17 324 8.3E-62 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS17470 7888c793716b7e94cd750cc16fa1128a 736 SUPERFAMILY SSF53300 22 211 1.59E-25 T 22-04-2016 IPR002035 von Willebrand factor, type A R615_RS17470 7888c793716b7e94cd750cc16fa1128a 736 Pfam PF00092 von Willebrand factor type A domain 29 205 1.1E-14 T 22-04-2016 IPR002035 von Willebrand factor, type A R615_RS17470 7888c793716b7e94cd750cc16fa1128a 736 PANTHER PTHR10579 29 211 4.3E-12 T 22-04-2016 R615_RS17470 7888c793716b7e94cd750cc16fa1128a 736 Gene3D G3DSA:3.40.50.410 25 216 4.8E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A R615_RS17470 7888c793716b7e94cd750cc16fa1128a 736 SMART SM00327 27 213 2.1E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 Gene3D G3DSA:3.50.50.60 407 487 3.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 Gene3D G3DSA:3.50.50.60 577 648 3.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 Gene3D G3DSA:3.50.50.60 283 364 3.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 Gene3D G3DSA:3.40.50.150 19 260 4.9E-83 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 PANTHER PTHR13847 239 591 3.0E-38 T 22-04-2016 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 PANTHER PTHR13847 611 665 3.0E-38 T 22-04-2016 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 SUPERFAMILY SSF51905 577 663 4.92E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 SUPERFAMILY SSF51905 286 488 4.92E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 15 665 23.129 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 Pfam PF01266 FAD dependent oxidoreductase 286 641 2.1E-36 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 SUPERFAMILY SSF54373 487 555 6.02E-5 T 22-04-2016 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 130 256 1.9E-36 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 286 669 4.1E-105 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 PANTHER PTHR13847:SF182 239 591 3.0E-38 T 22-04-2016 R615_RS05980 dc836c96ba4d288b2e3c93a7552b3156 678 PANTHER PTHR13847:SF182 611 665 3.0E-38 T 22-04-2016 R615_RS11445 d3d50355b2bfd212e3f580fd3a1e1d29 360 PANTHER PTHR30469 1 349 1.7E-38 T 22-04-2016 R615_RS11445 d3d50355b2bfd212e3f580fd3a1e1d29 360 Gene3D G3DSA:2.40.50.100 166 199 7.9E-14 T 22-04-2016 R615_RS11445 d3d50355b2bfd212e3f580fd3a1e1d29 360 Gene3D G3DSA:2.40.50.100 72 105 7.9E-14 T 22-04-2016 R615_RS11445 d3d50355b2bfd212e3f580fd3a1e1d29 360 SUPERFAMILY SSF111369 63 277 3.01E-30 T 22-04-2016 R615_RS11445 d3d50355b2bfd212e3f580fd3a1e1d29 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 259 3.4E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain R615_RS11445 d3d50355b2bfd212e3f580fd3a1e1d29 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 350 1.7E-44 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 R615_RS11445 d3d50355b2bfd212e3f580fd3a1e1d29 360 PANTHER PTHR30469:SF15 1 349 1.7E-38 T 22-04-2016 R615_RS10490 3611ef91621c634edb34d8adebccaad4 187 SUPERFAMILY SSF55811 2 160 3.52E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS10490 3611ef91621c634edb34d8adebccaad4 187 PRINTS PR00502 NUDIX hydrolase family signature 65 79 8.9E-6 T 22-04-2016 IPR020476 NUDIX hydrolase R615_RS10490 3611ef91621c634edb34d8adebccaad4 187 PRINTS PR00502 NUDIX hydrolase family signature 79 94 8.9E-6 T 22-04-2016 IPR020476 NUDIX hydrolase R615_RS10490 3611ef91621c634edb34d8adebccaad4 187 PANTHER PTHR22769 1 161 7.1E-68 T 22-04-2016 R615_RS10490 3611ef91621c634edb34d8adebccaad4 187 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 R615_RS10490 3611ef91621c634edb34d8adebccaad4 187 Gene3D G3DSA:2.20.70.10 1 34 8.3E-13 T 22-04-2016 R615_RS10490 3611ef91621c634edb34d8adebccaad4 187 Gene3D G3DSA:3.90.79.10 36 161 6.1E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS10490 3611ef91621c634edb34d8adebccaad4 187 PANTHER PTHR22769:SF17 1 161 7.1E-68 T 22-04-2016 R615_RS10490 3611ef91621c634edb34d8adebccaad4 187 Pfam PF14803 Nudix N-terminal 2 34 1.5E-14 T 22-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- R615_RS10490 3611ef91621c634edb34d8adebccaad4 187 Pfam PF00293 NUDIX domain 40 143 7.4E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 R615_RS14490 421ba32adb6d3e029fbba34f45f4bc8f 371 SUPERFAMILY SSF55821 2 202 1.56E-84 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain R615_RS14490 421ba32adb6d3e029fbba34f45f4bc8f 371 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 6.6E-72 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14490 421ba32adb6d3e029fbba34f45f4bc8f 371 Pfam PF00925 GTP cyclohydrolase II 209 368 2.2E-28 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 R615_RS14490 421ba32adb6d3e029fbba34f45f4bc8f 371 PANTHER PTHR21327 1 368 3.9E-133 T 22-04-2016 R615_RS14490 421ba32adb6d3e029fbba34f45f4bc8f 371 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.39 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14490 421ba32adb6d3e029fbba34f45f4bc8f 371 PANTHER PTHR21327:SF6 1 368 3.9E-133 T 22-04-2016 R615_RS14490 421ba32adb6d3e029fbba34f45f4bc8f 371 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 6.7E-81 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS14490 421ba32adb6d3e029fbba34f45f4bc8f 371 PIRSF PIRSF001259 2 371 5.2E-112 T 22-04-2016 R615_RS14490 421ba32adb6d3e029fbba34f45f4bc8f 371 SUPERFAMILY SSF142695 204 369 2.22E-38 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 R615_RS14490 421ba32adb6d3e029fbba34f45f4bc8f 371 Gene3D G3DSA:3.90.870.10 1 209 3.0E-96 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain R615_RS06730 8f1110872b3a79d6fc159a9f6986e67f 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 2.0E-22 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 R615_RS06730 8f1110872b3a79d6fc159a9f6986e67f 402 SUPERFAMILY SSF47203 241 396 4.03E-37 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS06730 8f1110872b3a79d6fc159a9f6986e67f 402 Gene3D G3DSA:1.10.540.10 11 131 6.5E-7 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 R615_RS06730 8f1110872b3a79d6fc159a9f6986e67f 402 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 352 371 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 R615_RS06730 8f1110872b3a79d6fc159a9f6986e67f 402 Gene3D G3DSA:1.20.140.10 243 396 1.1E-51 T 22-04-2016 R615_RS06730 8f1110872b3a79d6fc159a9f6986e67f 402 SUPERFAMILY SSF56645 13 254 1.44E-45 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 R615_RS06730 8f1110872b3a79d6fc159a9f6986e67f 402 PANTHER PTHR10909 10 402 4.0E-86 T 22-04-2016 R615_RS06730 8f1110872b3a79d6fc159a9f6986e67f 402 Gene3D G3DSA:2.40.110.10 132 235 2.5E-36 T 22-04-2016 R615_RS06730 8f1110872b3a79d6fc159a9f6986e67f 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 394 2.2E-40 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 R615_RS03155 4a4b4f01a1e3319f6e6077a3cd246b1f 92 SMART SM00448 4 92 0.0055 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS03155 4a4b4f01a1e3319f6e6077a3cd246b1f 92 Pfam PF00072 Response regulator receiver domain 6 85 7.0E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS03155 4a4b4f01a1e3319f6e6077a3cd246b1f 92 SUPERFAMILY SSF52172 5 89 6.26E-17 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS03155 4a4b4f01a1e3319f6e6077a3cd246b1f 92 Gene3D G3DSA:3.40.50.2300 5 85 7.2E-17 T 22-04-2016 R615_RS03155 4a4b4f01a1e3319f6e6077a3cd246b1f 92 PANTHER PTHR26402 4 92 4.7E-15 T 22-04-2016 R615_RS00160 bef8eb2ef0e8c2007bef5a4eb78a464e 421 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 210 1.2E-64 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 R615_RS00160 bef8eb2ef0e8c2007bef5a4eb78a464e 421 PANTHER PTHR23417:SF2 130 140 1.2E-107 T 22-04-2016 R615_RS00160 bef8eb2ef0e8c2007bef5a4eb78a464e 421 Gene3D G3DSA:3.40.50.2000 264 398 7.6E-6 T 22-04-2016 R615_RS00160 bef8eb2ef0e8c2007bef5a4eb78a464e 421 PANTHER PTHR23417 3 111 1.2E-107 T 22-04-2016 R615_RS00160 bef8eb2ef0e8c2007bef5a4eb78a464e 421 PANTHER PTHR23417 190 409 1.2E-107 T 22-04-2016 R615_RS00160 bef8eb2ef0e8c2007bef5a4eb78a464e 421 PANTHER PTHR23417 130 140 1.2E-107 T 22-04-2016 R615_RS00160 bef8eb2ef0e8c2007bef5a4eb78a464e 421 PANTHER PTHR23417:SF2 190 409 1.2E-107 T 22-04-2016 R615_RS00160 bef8eb2ef0e8c2007bef5a4eb78a464e 421 PANTHER PTHR23417:SF2 3 111 1.2E-107 T 22-04-2016 R615_RS00160 bef8eb2ef0e8c2007bef5a4eb78a464e 421 SUPERFAMILY SSF53756 58 404 1.37E-16 T 22-04-2016 R615_RS00160 bef8eb2ef0e8c2007bef5a4eb78a464e 421 Pfam PF00534 Glycosyl transferases group 1 298 399 2.3E-7 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 R615_RS16750 6604a922d0362b6a85199fe8c7d37439 218 Gene3D G3DSA:1.10.357.10 9 191 1.3E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS16750 6604a922d0362b6a85199fe8c7d37439 218 SUPERFAMILY SSF46689 25 104 1.7E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS16750 6604a922d0362b6a85199fe8c7d37439 218 PANTHER PTHR30055 17 201 1.9E-21 T 22-04-2016 R615_RS16750 6604a922d0362b6a85199fe8c7d37439 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 81 1.2E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS16750 6604a922d0362b6a85199fe8c7d37439 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 5.6E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS16750 6604a922d0362b6a85199fe8c7d37439 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 5.6E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 Pfam PF13432 Tetratricopeptide repeat 453 518 6.7E-5 T 22-04-2016 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 PANTHER PTHR23083:SF195 128 598 1.5E-54 T 22-04-2016 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 SUPERFAMILY SSF48452 120 172 9.8E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 SMART SM00028 211 244 0.0023 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 SMART SM00028 449 482 78.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 SMART SM00028 143 176 150.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 SMART SM00028 518 551 160.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 SMART SM00028 347 380 20.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 SMART SM00028 313 346 200.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 SMART SM00028 483 517 1.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 SMART SM00028 245 278 15.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 Pfam PF14559 Tetratricopeptide repeat 225 288 1.3E-7 T 22-04-2016 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 PANTHER PTHR23083 128 598 1.5E-54 T 22-04-2016 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 SUPERFAMILY SSF48452 424 584 1.17E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 SUPERFAMILY SSF48452 208 375 2.44E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 Gene3D G3DSA:1.25.40.10 422 585 6.0E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 Gene3D G3DSA:1.25.40.10 208 372 3.0E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS12965 aec5e7dfa6cb70b0b8431e6bd15adfb7 601 Gene3D G3DSA:1.25.40.10 117 173 3.0E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS13225 35e17c2986f0480b9f257383b511e620 339 PANTHER PTHR24353 129 246 2.4E-14 T 22-04-2016 R615_RS13225 35e17c2986f0480b9f257383b511e620 339 Gene3D G3DSA:2.60.120.10 6 64 2.9E-7 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS13225 35e17c2986f0480b9f257383b511e620 339 SUPERFAMILY SSF52821 236 336 2.62E-16 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS13225 35e17c2986f0480b9f257383b511e620 339 Gene3D G3DSA:2.60.120.10 131 249 6.3E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS13225 35e17c2986f0480b9f257383b511e620 339 SUPERFAMILY SSF51206 7 110 7.33E-10 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like R615_RS13225 35e17c2986f0480b9f257383b511e620 339 Gene3D G3DSA:3.40.250.10 250 334 7.8E-15 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS13225 35e17c2986f0480b9f257383b511e620 339 SUPERFAMILY SSF51206 131 248 4.19E-24 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like R615_RS13225 35e17c2986f0480b9f257383b511e620 339 SMART SM00100 144 260 7.2E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS13225 35e17c2986f0480b9f257383b511e620 339 Pfam PF00027 Cyclic nucleotide-binding domain 164 248 2.1E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS14130 5f905cdcc175d9624c07e08c5a08c030 125 SUPERFAMILY SSF110069 3 125 1.26E-47 T 22-04-2016 IPR007474 ApaG domain R615_RS14130 5f905cdcc175d9624c07e08c5a08c030 125 Gene3D G3DSA:2.60.40.1470 4 124 2.6E-44 T 22-04-2016 IPR007474 ApaG domain R615_RS14130 5f905cdcc175d9624c07e08c5a08c030 125 Pfam PF04379 Protein of unknown function (DUF525) 18 102 6.4E-33 T 22-04-2016 IPR007474 ApaG domain R615_RS14130 5f905cdcc175d9624c07e08c5a08c030 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 30.453 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG R615_RS14130 5f905cdcc175d9624c07e08c5a08c030 125 PANTHER PTHR14289 5 121 7.8E-45 T 22-04-2016 R615_RS10870 e48f3bdbfd8ba664f546f1780097c7c2 333 PANTHER PTHR33529:SF2 1 333 2.1E-78 T 22-04-2016 R615_RS10870 e48f3bdbfd8ba664f546f1780097c7c2 333 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 1 319 3.5E-97 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 R615_RS10870 e48f3bdbfd8ba664f546f1780097c7c2 333 Pfam PF03739 Predicted permease YjgP/YjgQ family 1 319 2.7E-62 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 R615_RS10870 e48f3bdbfd8ba664f546f1780097c7c2 333 PANTHER PTHR33529 1 333 2.1E-78 T 22-04-2016 R615_RS12700 d3f8acf72b467f6c22154c1a19942db4 613 Gene3D G3DSA:3.40.50.300 360 600 4.3E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12700 d3f8acf72b467f6c22154c1a19942db4 613 SUPERFAMILY SSF52540 351 605 3.42E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12700 d3f8acf72b467f6c22154c1a19942db4 613 Pfam PF00664 ABC transporter transmembrane region 41 308 6.6E-19 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 R615_RS12700 d3f8acf72b467f6c22154c1a19942db4 613 Pfam PF00005 ABC transporter 382 535 4.9E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS12700 d3f8acf72b467f6c22154c1a19942db4 613 SUPERFAMILY SSF90123 20 325 3.92E-50 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 R615_RS12700 d3f8acf72b467f6c22154c1a19942db4 613 SUPERFAMILY SSF90123 511 526 3.92E-50 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 R615_RS12700 d3f8acf72b467f6c22154c1a19942db4 613 PANTHER PTHR24221:SF203 5 613 0.0 T 22-04-2016 R615_RS12700 d3f8acf72b467f6c22154c1a19942db4 613 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS12700 d3f8acf72b467f6c22154c1a19942db4 613 SMART SM00382 390 581 5.7E-22 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS12700 d3f8acf72b467f6c22154c1a19942db4 613 PANTHER PTHR24221 5 613 0.0 T 22-04-2016 R615_RS12700 d3f8acf72b467f6c22154c1a19942db4 613 Gene3D G3DSA:1.20.1560.10 30 330 5.7E-36 T 22-04-2016 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 PIRSF PIRSF500210 7 324 9.8E-116 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 323 42.37 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 16 182 1.5E-55 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 PANTHER PTHR11556 20 324 1.2E-132 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 SUPERFAMILY SSF56655 6 321 1.31E-103 T 22-04-2016 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 Gene3D G3DSA:3.30.540.10 14 185 2.1E-65 T 22-04-2016 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 195 222 5.96E-57 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 297 322 5.96E-57 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 138 161 5.96E-57 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 169 192 5.96E-57 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 22 49 5.96E-57 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 59 85 5.96E-57 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 PIRSF PIRSF000904 5 324 4.9E-113 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 R615_RS13790 2baf3012162fd524df8334b0d4caf275 324 Gene3D G3DSA:3.40.190.80 186 321 6.6E-50 T 22-04-2016 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 SUPERFAMILY SSF48452 399 460 3.87E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 SUPERFAMILY SSF48452 498 563 3.87E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 Pfam PF13432 Tetratricopeptide repeat 400 447 2.5E-4 T 22-04-2016 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 Pfam PF13432 Tetratricopeptide repeat 170 237 2.7E-5 T 22-04-2016 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 Gene3D G3DSA:1.25.40.10 549 830 5.9E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 Pfam PF13174 Tetratricopeptide repeat 131 161 2.1E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 Pfam PF13174 Tetratricopeptide repeat 627 658 0.12 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 SUPERFAMILY SSF48452 549 681 4.02E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 SUPERFAMILY SSF48452 110 228 5.82E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 Gene3D G3DSA:1.25.40.10 402 452 6.8E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 Gene3D G3DSA:1.25.40.10 501 528 6.8E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 Gene3D G3DSA:1.25.40.10 287 337 6.8E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 Gene3D G3DSA:1.25.40.10 109 230 2.3E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 SMART SM00028 625 658 340.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 SMART SM00028 128 161 29.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 SMART SM00028 423 456 5.4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS09325 ee9364ded7acc3c68693f3f05242681a 935 SMART SM00028 165 198 3.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS16200 e3ef92867ae776280a77a1eeafa080ac 103 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 9 89 5.3E-22 T 22-04-2016 IPR005228 Conserved hypothetical protein CHP00251 R615_RS16200 e3ef92867ae776280a77a1eeafa080ac 103 SMART SM01152 8 84 1.0E-37 T 22-04-2016 IPR003746 Protein of unknown function DUF167 R615_RS16200 e3ef92867ae776280a77a1eeafa080ac 103 Gene3D G3DSA:3.30.1200.10 2 97 9.3E-31 T 22-04-2016 IPR003746 Protein of unknown function DUF167 R615_RS16200 e3ef92867ae776280a77a1eeafa080ac 103 PANTHER PTHR13420 12 96 9.8E-21 T 22-04-2016 R615_RS16200 e3ef92867ae776280a77a1eeafa080ac 103 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 82 1.3E-26 T 22-04-2016 IPR003746 Protein of unknown function DUF167 R615_RS16200 e3ef92867ae776280a77a1eeafa080ac 103 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 20.164 T 22-04-2016 IPR003746 Protein of unknown function DUF167 R615_RS16200 e3ef92867ae776280a77a1eeafa080ac 103 SUPERFAMILY SSF69786 2 96 7.85E-31 T 22-04-2016 IPR003746 Protein of unknown function DUF167 R615_RS16080 e4cacea5adfb3f29319be3a8d3556419 414 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 115 381 6.7E-49 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 R615_RS16080 e4cacea5adfb3f29319be3a8d3556419 414 PANTHER PTHR37326:SF1 74 401 9.8E-79 T 22-04-2016 R615_RS16080 e4cacea5adfb3f29319be3a8d3556419 414 Gene3D G3DSA:3.40.630.10 101 295 7.1E-25 T 22-04-2016 R615_RS16080 e4cacea5adfb3f29319be3a8d3556419 414 PANTHER PTHR37326 74 401 9.8E-79 T 22-04-2016 R615_RS16080 e4cacea5adfb3f29319be3a8d3556419 414 SUPERFAMILY SSF53187 100 382 5.95E-60 T 22-04-2016 R615_RS15630 f79882de3b833b54d78c92803e69e632 421 SUPERFAMILY SSF52540 77 158 8.93E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15630 f79882de3b833b54d78c92803e69e632 421 SUPERFAMILY SSF52540 205 320 8.93E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15630 f79882de3b833b54d78c92803e69e632 421 Gene3D G3DSA:3.40.50.300 16 126 9.4E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15630 f79882de3b833b54d78c92803e69e632 421 Pfam PF00271 Helicase conserved C-terminal domain 223 317 1.8E-6 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS15630 f79882de3b833b54d78c92803e69e632 421 Gene3D G3DSA:3.40.50.300 221 337 9.4E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15190 e5dbc1662d0f4561b622138bc9438b97 308 PANTHER PTHR32196:SF33 10 307 4.1E-112 T 22-04-2016 R615_RS15190 e5dbc1662d0f4561b622138bc9438b97 308 PANTHER PTHR32196 10 307 4.1E-112 T 22-04-2016 R615_RS15190 e5dbc1662d0f4561b622138bc9438b97 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 282 7.8E-34 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 R615_RS10860 2d5382a90404671341a2ba2d947d4f57 148 PANTHER PTHR36115:SF2 1 147 1.7E-32 T 22-04-2016 R615_RS10860 2d5382a90404671341a2ba2d947d4f57 148 Pfam PF06271 RDD family 9 135 2.7E-23 T 22-04-2016 IPR010432 RDD R615_RS10860 2d5382a90404671341a2ba2d947d4f57 148 PANTHER PTHR36115 1 147 1.7E-32 T 22-04-2016 R615_RS00570 4cd5834bd6d903505b7ff820f0942deb 275 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 271 31.041 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS00570 4cd5834bd6d903505b7ff820f0942deb 275 Gene3D G3DSA:3.40.192.10 2 107 6.9E-34 T 22-04-2016 R615_RS00570 4cd5834bd6d903505b7ff820f0942deb 275 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 269 3.9E-81 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS00570 4cd5834bd6d903505b7ff820f0942deb 275 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 3.9E-23 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 R615_RS00570 4cd5834bd6d903505b7ff820f0942deb 275 PANTHER PTHR21089 1 271 1.8E-138 T 22-04-2016 R615_RS00570 4cd5834bd6d903505b7ff820f0942deb 275 SUPERFAMILY SSF51735 103 269 1.39E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00570 4cd5834bd6d903505b7ff820f0942deb 275 SUPERFAMILY SSF53223 2 102 2.88E-30 T 22-04-2016 R615_RS00570 4cd5834bd6d903505b7ff820f0942deb 275 Gene3D G3DSA:3.40.50.720 108 246 1.9E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00570 4cd5834bd6d903505b7ff820f0942deb 275 PANTHER PTHR21089:SF2 1 271 1.8E-138 T 22-04-2016 R615_RS00570 4cd5834bd6d903505b7ff820f0942deb 275 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 193 5.1E-11 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase R615_RS14685 51138a604c8b79f2a491e73af39e1bd0 1064 Gene3D G3DSA:1.20.1640.10 187 385 8.3E-34 T 22-04-2016 R615_RS14685 51138a604c8b79f2a491e73af39e1bd0 1064 Gene3D G3DSA:1.20.1640.10 596 784 9.3E-28 T 22-04-2016 R615_RS14685 51138a604c8b79f2a491e73af39e1bd0 1064 PANTHER PTHR33406 1 96 8.0E-43 T 22-04-2016 R615_RS14685 51138a604c8b79f2a491e73af39e1bd0 1064 PANTHER PTHR33406 114 781 8.0E-43 T 22-04-2016 R615_RS14685 51138a604c8b79f2a491e73af39e1bd0 1064 Pfam PF03176 MMPL family 584 782 9.4E-12 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 R615_RS14685 51138a604c8b79f2a491e73af39e1bd0 1064 Pfam PF03176 MMPL family 145 379 3.4E-19 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 R615_RS14685 51138a604c8b79f2a491e73af39e1bd0 1064 SUPERFAMILY SSF82866 593 784 1.83E-27 T 22-04-2016 R615_RS14685 51138a604c8b79f2a491e73af39e1bd0 1064 Gene3D G3DSA:2.50.20.10 823 1063 6.7E-61 T 22-04-2016 R615_RS14685 51138a604c8b79f2a491e73af39e1bd0 1064 Pfam PF17131 Outer membrane lipoprotein-sorting protein 872 1063 5.8E-54 T 22-04-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein R615_RS14685 51138a604c8b79f2a491e73af39e1bd0 1064 SUPERFAMILY SSF82866 179 383 5.1E-31 T 22-04-2016 R615_RS03380 eba78e0877c50ce5e7ef13bfbf836744 210 PANTHER PTHR39327:SF1 1 210 2.6E-72 T 22-04-2016 R615_RS03380 eba78e0877c50ce5e7ef13bfbf836744 210 PANTHER PTHR39327 1 210 2.6E-72 T 22-04-2016 R615_RS03380 eba78e0877c50ce5e7ef13bfbf836744 210 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 46 159 1.2E-19 T 22-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted R615_RS03380 eba78e0877c50ce5e7ef13bfbf836744 210 SUPERFAMILY SSF54001 34 115 1.57E-5 T 22-04-2016 R615_RS11095 47a5e2bb9ba4db8a4eb8f7e45656b785 87 PANTHER PTHR38039 4 87 6.0E-31 T 22-04-2016 R615_RS11095 47a5e2bb9ba4db8a4eb8f7e45656b785 87 SUPERFAMILY SSF143011 7 86 3.27E-27 T 22-04-2016 R615_RS11095 47a5e2bb9ba4db8a4eb8f7e45656b785 87 PANTHER PTHR38039:SF1 4 87 6.0E-31 T 22-04-2016 R615_RS11095 47a5e2bb9ba4db8a4eb8f7e45656b785 87 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 8 87 1.1E-34 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 R615_RS11095 47a5e2bb9ba4db8a4eb8f7e45656b785 87 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 8 87 3.2E-42 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 R615_RS16860 37a3e95d1ecb1e201d36f32cb206a2ae 241 Gene3D G3DSA:3.40.50.2300 2 120 6.5E-38 T 22-04-2016 R615_RS16860 37a3e95d1ecb1e201d36f32cb206a2ae 241 Gene3D G3DSA:2.40.50.40 136 198 1.1E-12 T 22-04-2016 R615_RS16860 37a3e95d1ecb1e201d36f32cb206a2ae 241 Pfam PF04397 LytTr DNA-binding domain 146 238 9.4E-21 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 R615_RS16860 37a3e95d1ecb1e201d36f32cb206a2ae 241 SUPERFAMILY SSF52172 3 121 8.97E-36 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS16860 37a3e95d1ecb1e201d36f32cb206a2ae 241 Pfam PF00072 Response regulator receiver domain 5 114 1.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS16860 37a3e95d1ecb1e201d36f32cb206a2ae 241 PANTHER PTHR26402:SF151 3 120 5.9E-37 T 22-04-2016 R615_RS16860 37a3e95d1ecb1e201d36f32cb206a2ae 241 SMART SM00850 143 239 4.8E-20 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 R615_RS16860 37a3e95d1ecb1e201d36f32cb206a2ae 241 PANTHER PTHR26402 3 120 5.9E-37 T 22-04-2016 R615_RS16860 37a3e95d1ecb1e201d36f32cb206a2ae 241 SMART SM00448 3 114 1.7E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS10810 a9c33b097796b5656cc3953f7c0d07db 371 PANTHER PTHR12169 2 371 1.1E-179 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 R615_RS10810 a9c33b097796b5656cc3953f7c0d07db 371 Gene3D G3DSA:3.40.50.300 6 179 8.5E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10810 a9c33b097796b5656cc3953f7c0d07db 371 Hamap MF_01919 Cell division protein ZapE [zapE]. 2 370 52.305 T 22-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 R615_RS10810 a9c33b097796b5656cc3953f7c0d07db 371 PANTHER PTHR12169:SF11 2 371 1.1E-179 T 22-04-2016 R615_RS10810 a9c33b097796b5656cc3953f7c0d07db 371 SUPERFAMILY SSF52540 36 186 2.39E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10810 a9c33b097796b5656cc3953f7c0d07db 371 Pfam PF03969 AFG1-like ATPase 3 367 2.3E-147 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 R615_RS11145 9626ff82ff5a8c71069cc1d021e71a38 232 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 3 230 57.05 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 R615_RS11145 9626ff82ff5a8c71069cc1d021e71a38 232 Pfam PF02146 Sir2 family 10 180 4.2E-47 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 R615_RS11145 9626ff82ff5a8c71069cc1d021e71a38 232 PANTHER PTHR11085 2 228 2.1E-76 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 R615_RS11145 9626ff82ff5a8c71069cc1d021e71a38 232 Gene3D G3DSA:3.40.50.1220 66 108 7.1E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain R615_RS11145 9626ff82ff5a8c71069cc1d021e71a38 232 Gene3D G3DSA:3.40.50.1220 2 18 7.1E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain R615_RS11145 9626ff82ff5a8c71069cc1d021e71a38 232 Gene3D G3DSA:3.40.50.1220 159 222 7.1E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain R615_RS11145 9626ff82ff5a8c71069cc1d021e71a38 232 SUPERFAMILY SSF52467 2 228 1.66E-73 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain R615_RS11145 9626ff82ff5a8c71069cc1d021e71a38 232 Gene3D G3DSA:3.30.1600.10 19 58 1.1E-24 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain R615_RS11145 9626ff82ff5a8c71069cc1d021e71a38 232 Gene3D G3DSA:3.30.1600.10 109 152 1.1E-24 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain R615_RS11145 9626ff82ff5a8c71069cc1d021e71a38 232 PANTHER PTHR11085:SF17 2 228 2.1E-76 T 22-04-2016 R615_RS15080 8dc8ab37f06b7929f1868a67655f1a9d 399 PANTHER PTHR21493:SF119 80 210 2.6E-19 T 22-04-2016 R615_RS15080 8dc8ab37f06b7929f1868a67655f1a9d 399 SUPERFAMILY SSF53474 63 217 7.31E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS15080 8dc8ab37f06b7929f1868a67655f1a9d 399 Gene3D G3DSA:3.40.50.1820 10 217 9.8E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS15080 8dc8ab37f06b7929f1868a67655f1a9d 399 Pfam PF01764 Lipase (class 3) 81 212 2.8E-20 T 22-04-2016 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: REACT_14797|Reactome: REACT_604 R615_RS15080 8dc8ab37f06b7929f1868a67655f1a9d 399 PANTHER PTHR21493 80 210 2.6E-19 T 22-04-2016 R615_RS12565 79071aa834fac8fb424370e9d974b131 68 PANTHER PTHR39585 1 65 3.4E-16 T 22-04-2016 R615_RS12565 79071aa834fac8fb424370e9d974b131 68 Gene3D G3DSA:1.10.150.250 1 65 9.4E-19 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase R615_RS12565 79071aa834fac8fb424370e9d974b131 68 Pfam PF03937 Flavinator of succinate dehydrogenase 1 58 8.1E-18 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase R615_RS12565 79071aa834fac8fb424370e9d974b131 68 PANTHER PTHR39585:SF1 1 65 3.4E-16 T 22-04-2016 R615_RS12565 79071aa834fac8fb424370e9d974b131 68 SUPERFAMILY SSF109910 1 62 4.45E-16 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase R615_RS12690 bac819f7a5287981400f5fd9dfddef4c 243 Gene3D G3DSA:3.40.190.10 117 191 5.6E-6 T 22-04-2016 R615_RS12690 bac819f7a5287981400f5fd9dfddef4c 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 231 1.2E-12 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF R615_RS12690 bac819f7a5287981400f5fd9dfddef4c 243 SUPERFAMILY SSF53850 19 231 7.35E-22 T 22-04-2016 R615_RS12690 bac819f7a5287981400f5fd9dfddef4c 243 PANTHER PTHR35936 41 243 1.4E-15 T 22-04-2016 R615_RS12690 bac819f7a5287981400f5fd9dfddef4c 243 PANTHER PTHR35936:SF3 41 243 1.4E-15 T 22-04-2016 R615_RS03255 4fc220f3f01b08db09c9d6b1662b06fb 267 Pfam PF16074 Type IV Pilus-assembly protein W 134 263 1.3E-16 T 22-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 R615_RS02660 d82f377066aca7b225b843bcb072cbb1 884 Pfam PF10101 Predicted membrane protein (DUF2339) 111 876 6.2E-137 T 22-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane R615_RS02660 d82f377066aca7b225b843bcb072cbb1 884 PANTHER PTHR38434 52 876 1.6E-31 T 22-04-2016 R615_RS02660 d82f377066aca7b225b843bcb072cbb1 884 PANTHER PTHR38434:SF1 52 876 1.6E-31 T 22-04-2016 R615_RS02660 d82f377066aca7b225b843bcb072cbb1 884 PIRSF PIRSF035905 26 884 7.9E-109 T 22-04-2016 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein R615_RS09620 b836c5878dfc2ff8be0e5beb8226228c 430 Pfam PF08245 Mur ligase middle domain 49 188 3.5E-9 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS09620 b836c5878dfc2ff8be0e5beb8226228c 430 SUPERFAMILY SSF53623 7 275 4.45E-73 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS09620 b836c5878dfc2ff8be0e5beb8226228c 430 Gene3D G3DSA:3.40.1190.10 7 275 5.7E-75 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS09620 b836c5878dfc2ff8be0e5beb8226228c 430 PIRSF PIRSF001563 1 419 2.4E-85 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 R615_RS09620 b836c5878dfc2ff8be0e5beb8226228c 430 PANTHER PTHR11136:SF0 10 423 2.7E-86 T 22-04-2016 R615_RS09620 b836c5878dfc2ff8be0e5beb8226228c 430 SUPERFAMILY SSF53244 285 408 3.2E-16 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS09620 b836c5878dfc2ff8be0e5beb8226228c 430 PANTHER PTHR11136 10 423 2.7E-86 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 R615_RS09620 b836c5878dfc2ff8be0e5beb8226228c 430 TIGRFAM TIGR01499 folC: bifunctional protein FolC 28 408 7.1E-81 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 R615_RS09620 b836c5878dfc2ff8be0e5beb8226228c 430 Gene3D G3DSA:3.90.190.20 287 415 1.2E-20 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS17410 a2beca3b5ab772a571b6d59066181b5e 303 PANTHER PTHR13355:SF8 17 147 1.5E-33 T 22-04-2016 R615_RS17410 a2beca3b5ab772a571b6d59066181b5e 303 PANTHER PTHR13355 17 147 1.5E-33 T 22-04-2016 R615_RS17410 a2beca3b5ab772a571b6d59066181b5e 303 SUPERFAMILY SSF55729 4 143 1.38E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS17410 a2beca3b5ab772a571b6d59066181b5e 303 Pfam PF13673 Acetyltransferase (GNAT) domain 21 137 2.6E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS17410 a2beca3b5ab772a571b6d59066181b5e 303 Gene3D G3DSA:3.40.630.30 12 137 2.1E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS16805 435cbd89b3183a65a3562ca6f8766453 231 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 18 231 28.419 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 R615_RS16805 435cbd89b3183a65a3562ca6f8766453 231 PANTHER PTHR23417 11 230 1.3E-72 T 22-04-2016 R615_RS16805 435cbd89b3183a65a3562ca6f8766453 231 PANTHER PTHR23417:SF14 11 230 1.3E-72 T 22-04-2016 R615_RS16805 435cbd89b3183a65a3562ca6f8766453 231 Gene3D G3DSA:3.40.50.150 36 202 1.3E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS16805 435cbd89b3183a65a3562ca6f8766453 231 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 52 231 2.8E-56 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 R615_RS16805 435cbd89b3183a65a3562ca6f8766453 231 SUPERFAMILY SSF53335 8 230 2.89E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS16805 435cbd89b3183a65a3562ca6f8766453 231 Pfam PF02390 Putative methyltransferase 59 226 1.7E-52 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 R615_RS01235 0997dae74b7297b3ac701f2e89060ea4 685 Gene3D G3DSA:1.10.287.950 424 641 2.0E-51 T 22-04-2016 R615_RS01235 0997dae74b7297b3ac701f2e89060ea4 685 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 669 1.9E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS01235 0997dae74b7297b3ac701f2e89060ea4 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 8.9E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS01235 0997dae74b7297b3ac701f2e89060ea4 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 507 534 8.9E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS01235 0997dae74b7297b3ac701f2e89060ea4 685 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 536 565 8.9E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS01235 0997dae74b7297b3ac701f2e89060ea4 685 PANTHER PTHR32089 377 673 2.3E-120 T 22-04-2016 R615_RS01235 0997dae74b7297b3ac701f2e89060ea4 685 SMART SM00283 409 670 6.8E-93 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS01235 0997dae74b7297b3ac701f2e89060ea4 685 PANTHER PTHR32089:SF43 377 673 2.3E-120 T 22-04-2016 R615_RS01235 0997dae74b7297b3ac701f2e89060ea4 685 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 43 144 5.6E-17 T 22-04-2016 IPR029095 NarX-like, N-terminal R615_RS01235 0997dae74b7297b3ac701f2e89060ea4 685 SUPERFAMILY SSF58104 371 671 5.62E-65 T 22-04-2016 R615_RS13725 90d3c18f9cfd4c66ca6475f11e576452 178 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 1 159 18.357 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 R615_RS13725 90d3c18f9cfd4c66ca6475f11e576452 178 PANTHER PTHR38098:SF1 1 178 2.0E-20 T 22-04-2016 R615_RS13725 90d3c18f9cfd4c66ca6475f11e576452 178 Pfam PF04390 Lipopolysaccharide-assembly 8 154 5.0E-15 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 R615_RS13725 90d3c18f9cfd4c66ca6475f11e576452 178 PANTHER PTHR38098 1 178 2.0E-20 T 22-04-2016 R615_RS13725 90d3c18f9cfd4c66ca6475f11e576452 178 Gene3D G3DSA:3.30.160.150 16 163 3.5E-32 T 22-04-2016 R615_RS00505 5ec3dbe90c011fe2464433e77bb94051 189 PANTHER PTHR13061 15 185 2.0E-72 T 22-04-2016 R615_RS00505 5ec3dbe90c011fe2464433e77bb94051 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 104 138 2.2E-7 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS00505 5ec3dbe90c011fe2464433e77bb94051 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 54 2.1E-6 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS00505 5ec3dbe90c011fe2464433e77bb94051 189 Gene3D G3DSA:2.160.10.10 12 182 4.2E-44 T 22-04-2016 R615_RS00505 5ec3dbe90c011fe2464433e77bb94051 189 SUPERFAMILY SSF51161 12 182 1.08E-45 T 22-04-2016 IPR011004 Trimeric LpxA-like R615_RS01305 5d422110a2725da5f4d54374023847ad 460 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 196 372 8.2E-59 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 78 92 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 Gene3D G3DSA:3.40.50.1480 6 197 5.3E-130 T 22-04-2016 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 Gene3D G3DSA:3.40.50.1480 373 460 5.3E-130 T 22-04-2016 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 6 146 2.4E-72 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 SMART SM00997 196 372 6.6E-84 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 Gene3D G3DSA:3.40.50.720 198 371 2.7E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS01305 5d422110a2725da5f4d54374023847ad 460 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 7 452 4.5E-156 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 PIRSF PIRSF001109 1 460 1.1E-181 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 PANTHER PTHR23420 1 460 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 218 235 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 SUPERFAMILY SSF51735 196 373 7.71E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS01305 5d422110a2725da5f4d54374023847ad 460 SMART SM00996 6 459 1.5E-278 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 SUPERFAMILY SSF52283 373 460 6.23E-108 T 22-04-2016 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 SUPERFAMILY SSF52283 4 195 6.23E-108 T 22-04-2016 R615_RS01305 5d422110a2725da5f4d54374023847ad 460 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 2 452 44.059 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 R615_RS01520 55bb43874113616159ebbc83ea95b53e 407 SUPERFAMILY SSF55874 277 403 8.51E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS01520 55bb43874113616159ebbc83ea95b53e 407 Gene3D G3DSA:3.30.565.10 299 406 3.5E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS16685 1040e5054090a82127da443aa2af22bb 218 PANTHER PTHR18901:SF7 5 197 7.6E-75 T 22-04-2016 R615_RS16685 1040e5054090a82127da443aa2af22bb 218 PANTHER PTHR18901 5 197 7.6E-75 T 22-04-2016 R615_RS16685 1040e5054090a82127da443aa2af22bb 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 189 1.6E-12 T 22-04-2016 IPR023214 HAD-like domain R615_RS16685 1040e5054090a82127da443aa2af22bb 218 Gene3D G3DSA:3.40.50.1000 8 189 2.5E-25 T 22-04-2016 IPR023214 HAD-like domain R615_RS16685 1040e5054090a82127da443aa2af22bb 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 190 3.8E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS16685 1040e5054090a82127da443aa2af22bb 218 SUPERFAMILY SSF56784 5 216 1.03E-38 T 22-04-2016 IPR023214 HAD-like domain R615_RS00880 ae75251d1d550801b2f4533672d02a79 297 Pfam PF08340 Domain of unknown function (DUF1732) 213 297 3.0E-34 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 R615_RS00880 ae75251d1d550801b2f4533672d02a79 297 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 297 7.3E-87 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 R615_RS00880 ae75251d1d550801b2f4533672d02a79 297 PANTHER PTHR30636 1 297 1.1E-92 T 22-04-2016 R615_RS00880 ae75251d1d550801b2f4533672d02a79 297 Pfam PF03755 YicC-like family, N-terminal region 3 163 1.5E-40 T 22-04-2016 IPR013527 YicC-like, N-terminal R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 Pfam PF03143 Elongation factor Tu C-terminal domain 311 405 5.7E-32 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 142 2.3E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 407 57.736 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 Gene3D G3DSA:2.40.30.10 313 406 9.5E-45 T 22-04-2016 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 Gene3D G3DSA:3.40.50.300 6 224 1.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 406 2.5E-215 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 PANTHER PTHR23115:SF151 1 406 1.2E-252 T 22-04-2016 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 SUPERFAMILY SSF50447 218 314 2.36E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 Pfam PF00009 Elongation factor Tu GTP binding domain 10 214 5.4E-56 T 22-04-2016 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 Pfam PF03144 Elongation factor Tu domain 2 238 306 2.8E-15 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 PANTHER PTHR23115 1 406 1.2E-252 T 22-04-2016 R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 SUPERFAMILY SSF50465 311 406 8.92E-34 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 SUPERFAMILY SSF52540 6 232 7.41E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15885 25a6299acfb12404f75fc14dc723e82c 407 Gene3D G3DSA:2.40.30.10 225 311 1.0E-33 T 22-04-2016 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 Pfam PF03143 Elongation factor Tu C-terminal domain 311 405 5.7E-32 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.6E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 142 2.3E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 407 57.736 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 Gene3D G3DSA:2.40.30.10 313 406 9.5E-45 T 22-04-2016 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 Gene3D G3DSA:3.40.50.300 6 224 1.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 406 2.5E-215 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 PANTHER PTHR23115:SF151 1 406 1.2E-252 T 22-04-2016 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 SUPERFAMILY SSF50447 218 314 2.36E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 Pfam PF00009 Elongation factor Tu GTP binding domain 10 214 5.4E-56 T 22-04-2016 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 Pfam PF03144 Elongation factor Tu domain 2 238 306 2.8E-15 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 PANTHER PTHR23115 1 406 1.2E-252 T 22-04-2016 R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 SUPERFAMILY SSF50465 311 406 8.92E-34 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 SUPERFAMILY SSF52540 6 232 7.41E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15960 25a6299acfb12404f75fc14dc723e82c 407 Gene3D G3DSA:2.40.30.10 225 311 1.0E-33 T 22-04-2016 R615_RS03505 2b7b70523ea22b693f8e1d10126d0cc6 213 SUPERFAMILY SSF52540 46 157 1.81E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03505 2b7b70523ea22b693f8e1d10126d0cc6 213 PANTHER PTHR35369:SF1 1 181 7.5E-36 T 22-04-2016 R615_RS03505 2b7b70523ea22b693f8e1d10126d0cc6 213 Pfam PF03846 Cell division inhibitor SulA 44 133 5.5E-11 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 R615_RS03505 2b7b70523ea22b693f8e1d10126d0cc6 213 PIRSF PIRSF037290 1 212 5.4E-58 T 22-04-2016 IPR017166 Uncharacterised conserved protein UCP037290 R615_RS03505 2b7b70523ea22b693f8e1d10126d0cc6 213 PANTHER PTHR35369 1 181 7.5E-36 T 22-04-2016 R615_RS03505 2b7b70523ea22b693f8e1d10126d0cc6 213 Gene3D G3DSA:3.40.50.300 46 158 2.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05115 4af773e30bf2abbd362e52b999ea4921 128 Pfam PF00072 Response regulator receiver domain 7 119 5.9E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS05115 4af773e30bf2abbd362e52b999ea4921 128 PANTHER PTHR26402 5 125 6.4E-42 T 22-04-2016 R615_RS05115 4af773e30bf2abbd362e52b999ea4921 128 SUPERFAMILY SSF52172 3 125 8.68E-37 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS05115 4af773e30bf2abbd362e52b999ea4921 128 Gene3D G3DSA:3.40.50.2300 3 125 1.4E-38 T 22-04-2016 R615_RS05115 4af773e30bf2abbd362e52b999ea4921 128 SMART SM00448 5 119 6.5E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PANTHER PTHR24322:SF328 9 137 5.9E-57 T 22-04-2016 R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PANTHER PTHR24322:SF328 153 185 5.9E-57 T 22-04-2016 R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.1E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.1E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.1E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.1E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.1E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.1E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 243 2.1E-98 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 1.2E-65 T 22-04-2016 R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 184 3.4E-7 T 22-04-2016 R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 SUPERFAMILY SSF51735 6 245 1.83E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 Gene3D G3DSA:3.40.50.720 6 245 5.4E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PANTHER PTHR24322 9 137 5.9E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PANTHER PTHR24322 153 185 5.9E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS09095 299ceb32c7b8d8caa6aab5ef06b8a3e6 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 SUPERFAMILY SSF55729 708 873 5.14E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 SMART SM00881 9 105 2.6E-27 T 22-04-2016 IPR003781 CoA-binding GO:0048037 R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 Pfam PF00583 Acetyltransferase (GNAT) family 804 872 6.0E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 Gene3D G3DSA:3.40.50.261 302 448 2.7E-14 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 SUPERFAMILY SSF52210 137 296 6.15E-25 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 PANTHER PTHR11117 31 694 3.6E-136 T 22-04-2016 R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 Gene3D G3DSA:3.40.630.30 739 874 9.7E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 Gene3D G3DSA:3.40.50.261 138 293 1.2E-17 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 Pfam PF13549 ATP-grasp domain 486 694 5.0E-36 T 22-04-2016 R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 Gene3D G3DSA:3.40.50.720 3 137 3.0E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 157 294 2.1E-32 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 Pfam PF13380 CoA binding domain 14 140 9.8E-18 T 22-04-2016 IPR003781 CoA-binding GO:0048037 R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 SUPERFAMILY SSF52210 302 456 1.96E-30 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 SUPERFAMILY SSF51735 2 143 7.88E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 SUPERFAMILY SSF56059 495 695 5.89E-6 T 22-04-2016 R615_RS08540 d5a6c2650cfacbb50e7fb86fb1e01001 904 PANTHER PTHR11117:SF8 31 694 3.6E-136 T 22-04-2016 R615_RS10410 e73fc5fd89f60c2402f349f7468c944a 493 Gene3D G3DSA:3.90.1300.10 4 488 1.5E-126 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS10410 e73fc5fd89f60c2402f349f7468c944a 493 SUPERFAMILY SSF75304 3 481 2.75E-122 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS10410 e73fc5fd89f60c2402f349f7468c944a 493 PANTHER PTHR11895 4 489 3.7E-146 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS10410 e73fc5fd89f60c2402f349f7468c944a 493 Pfam PF01425 Amidase 27 472 1.4E-105 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS10410 e73fc5fd89f60c2402f349f7468c944a 493 PANTHER PTHR11895:SF55 4 489 3.7E-146 T 22-04-2016 R615_RS10410 e73fc5fd89f60c2402f349f7468c944a 493 PIRSF PIRSF001221 2 415 3.8E-52 T 22-04-2016 R615_RS03050 134f8f5d5e4bfb7dd8bb7a37ee906481 617 PANTHER PTHR30627:SF2 4 612 2.2E-216 T 22-04-2016 R615_RS03050 134f8f5d5e4bfb7dd8bb7a37ee906481 617 PANTHER PTHR30627 4 612 2.2E-216 T 22-04-2016 R615_RS03050 134f8f5d5e4bfb7dd8bb7a37ee906481 617 Gene3D G3DSA:3.40.710.10 255 613 4.9E-97 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS03050 134f8f5d5e4bfb7dd8bb7a37ee906481 617 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 240 5.2E-44 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 R615_RS03050 134f8f5d5e4bfb7dd8bb7a37ee906481 617 Gene3D G3DSA:3.90.1310.10 130 253 1.6E-37 T 22-04-2016 R615_RS03050 134f8f5d5e4bfb7dd8bb7a37ee906481 617 SUPERFAMILY SSF56519 55 253 4.97E-51 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 R615_RS03050 134f8f5d5e4bfb7dd8bb7a37ee906481 617 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 608 4.0E-61 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 R615_RS03050 134f8f5d5e4bfb7dd8bb7a37ee906481 617 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 613 1.4E-224 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 R615_RS03050 134f8f5d5e4bfb7dd8bb7a37ee906481 617 SUPERFAMILY SSF56601 255 613 2.05E-91 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS16280 0feddcfe5a8b678b1f441ab0f1b6a700 436 Gene3D G3DSA:1.20.1250.20 266 434 1.8E-8 T 22-04-2016 R615_RS16280 0feddcfe5a8b678b1f441ab0f1b6a700 436 Gene3D G3DSA:1.20.1250.20 38 225 3.4E-9 T 22-04-2016 R615_RS16280 0feddcfe5a8b678b1f441ab0f1b6a700 436 PANTHER PTHR23526 61 434 6.2E-15 T 22-04-2016 R615_RS16280 0feddcfe5a8b678b1f441ab0f1b6a700 436 SUPERFAMILY SSF103473 37 432 1.83E-21 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS04210 2553dc254900b4db667a709ea755dfe2 467 PANTHER PTHR11785 18 443 1.0E-109 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 R615_RS04210 2553dc254900b4db667a709ea755dfe2 467 PANTHER PTHR11785:SF337 18 443 1.0E-109 T 22-04-2016 R615_RS04210 2553dc254900b4db667a709ea755dfe2 467 Pfam PF13520 Amino acid permease 30 416 2.9E-34 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 R615_RS04210 2553dc254900b4db667a709ea755dfe2 467 PIRSF PIRSF006060 1 463 2.0E-64 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 R615_RS04210 2553dc254900b4db667a709ea755dfe2 467 TIGRFAM TIGR00908 2A0305: ethanolamine permease 11 452 1.3E-145 T 22-04-2016 IPR004757 Ethanolamine permease R615_RS08270 646336f5ac228203564ea2155a07cac0 259 PANTHER PTHR23344 19 250 4.6E-58 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 R615_RS08270 646336f5ac228203564ea2155a07cac0 259 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 22 247 1.8E-37 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 R615_RS08270 646336f5ac228203564ea2155a07cac0 259 SUPERFAMILY SSF51695 19 249 3.4E-66 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 R615_RS08270 646336f5ac228203564ea2155a07cac0 259 Gene3D G3DSA:3.20.20.190 18 249 6.5E-66 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 R615_RS03070 05fdabcbd6d64c8761394d40e87268be 418 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 407 2.2E-149 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 R615_RS03070 05fdabcbd6d64c8761394d40e87268be 418 Gene3D G3DSA:3.40.605.10 376 417 1.1E-99 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 R615_RS03070 05fdabcbd6d64c8761394d40e87268be 418 Gene3D G3DSA:3.40.605.10 4 225 1.1E-99 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 R615_RS03070 05fdabcbd6d64c8761394d40e87268be 418 Gene3D G3DSA:3.40.309.10 227 375 2.6E-44 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 R615_RS03070 05fdabcbd6d64c8761394d40e87268be 418 PIRSF PIRSF000151 1 418 1.7E-175 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 R615_RS03070 05fdabcbd6d64c8761394d40e87268be 418 SUPERFAMILY SSF53720 6 417 2.62E-118 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 R615_RS03070 05fdabcbd6d64c8761394d40e87268be 418 PANTHER PTHR11063 7 418 9.5E-176 T 22-04-2016 R615_RS03070 05fdabcbd6d64c8761394d40e87268be 418 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 324 346 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 R615_RS03070 05fdabcbd6d64c8761394d40e87268be 418 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 417 40.99 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 R615_RS03070 05fdabcbd6d64c8761394d40e87268be 418 PANTHER PTHR11063:SF8 7 418 9.5E-176 T 22-04-2016 R615_RS03070 05fdabcbd6d64c8761394d40e87268be 418 Pfam PF00171 Aldehyde dehydrogenase family 12 287 3.6E-16 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 R615_RS03070 05fdabcbd6d64c8761394d40e87268be 418 Pfam PF00171 Aldehyde dehydrogenase family 309 374 2.9E-6 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 SMART SM01193 4 134 7.9E-91 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 ProSitePatterns PS00164 Enolase signature. 338 351 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 PANTHER PTHR11902 1 426 8.1E-274 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 PRINTS PR00148 Enolase signature 165 178 3.9E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 PRINTS PR00148 Enolase signature 315 326 3.9E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 PRINTS PR00148 Enolase signature 338 352 3.9E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 PRINTS PR00148 Enolase signature 37 51 3.9E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 PRINTS PR00148 Enolase signature 107 123 3.9E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 PRINTS PR00148 Enolase signature 367 384 3.9E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 Hamap MF_00318 Enolase [eno]. 2 415 44.272 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 Pfam PF03952 Enolase, N-terminal domain 4 134 3.8E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 Gene3D G3DSA:3.20.20.120 129 427 5.9E-136 T 22-04-2016 IPR029065 Enolase C-terminal domain-like R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 SUPERFAMILY SSF54826 3 138 2.29E-56 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 428 5.7E-138 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 PIRSF PIRSF001400 1 429 1.6E-192 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 Gene3D G3DSA:3.30.390.10 3 126 5.5E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 SUPERFAMILY SSF51604 143 426 5.99E-128 T 22-04-2016 IPR029065 Enolase C-terminal domain-like R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 5.9E-205 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 R615_RS02190 4809896f400a4f2858a2b7a0eb218bda 430 SMART SM01192 143 429 1.9E-219 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 R615_RS06620 ba3793e1719a187d31c2e276655ccd11 128 SUPERFAMILY SSF55331 1 118 2.1E-31 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily R615_RS06620 ba3793e1719a187d31c2e276655ccd11 128 PANTHER PTHR38460:SF1 1 128 1.4E-24 T 22-04-2016 R615_RS06620 ba3793e1719a187d31c2e276655ccd11 128 Pfam PF14552 Tautomerase enzyme 36 112 2.7E-22 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 R615_RS06620 ba3793e1719a187d31c2e276655ccd11 128 Gene3D G3DSA:3.30.429.10 1 128 1.5E-44 T 22-04-2016 R615_RS06620 ba3793e1719a187d31c2e276655ccd11 128 PANTHER PTHR38460 1 128 1.4E-24 T 22-04-2016 R615_RS00920 075529cd2303ce6a7a9eff0a12197e1d 151 SUPERFAMILY SSF51283 1 150 4.06E-53 T 22-04-2016 IPR029054 dUTPase-like R615_RS00920 075529cd2303ce6a7a9eff0a12197e1d 151 Pfam PF00692 dUTPase 17 149 8.5E-41 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 R615_RS00920 075529cd2303ce6a7a9eff0a12197e1d 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 33.473 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 R615_RS00920 075529cd2303ce6a7a9eff0a12197e1d 151 PANTHER PTHR11241 12 150 6.0E-50 T 22-04-2016 R615_RS00920 075529cd2303ce6a7a9eff0a12197e1d 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 1.0E-48 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 R615_RS00920 075529cd2303ce6a7a9eff0a12197e1d 151 Gene3D G3DSA:2.70.40.10 5 150 6.5E-52 T 22-04-2016 IPR029054 dUTPase-like R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 248 329 5.0E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 SMART SM00245 336 545 2.2E-58 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 SUPERFAMILY SSF50156 252 328 1.29E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 548 697 4.1E-38 T 22-04-2016 IPR020992 Tail specific protease, C-terminal R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 207 565 3.2E-95 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 Gene3D G3DSA:2.30.42.10 261 345 5.5E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 PANTHER PTHR32060:SF11 1 618 2.5E-228 T 22-04-2016 R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 Gene3D G3DSA:3.90.226.10 346 576 6.8E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 SMART SM00228 254 332 3.3E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 SUPERFAMILY SSF52096 360 550 8.12E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 SUPERFAMILY SSF52096 179 272 8.12E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 Pfam PF03572 Peptidase family S41 370 542 2.2E-50 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 Gene3D G3DSA:3.30.750.44 205 260 4.5E-5 T 22-04-2016 R615_RS06750 dbe444d1e2499ee6fb4233e190ab7200 712 PANTHER PTHR32060 1 618 2.5E-228 T 22-04-2016 R615_RS06395 ce071b56d59ccac2e4c5aaaf2a06a15e 352 PANTHER PTHR30401 1 352 1.2E-138 T 22-04-2016 R615_RS06395 ce071b56d59ccac2e4c5aaaf2a06a15e 352 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 1 333 1.1E-102 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 R615_RS06395 ce071b56d59ccac2e4c5aaaf2a06a15e 352 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 348 46.643 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 R615_RS06395 ce071b56d59ccac2e4c5aaaf2a06a15e 352 PANTHER PTHR30401:SF0 1 352 1.2E-138 T 22-04-2016 R615_RS06395 ce071b56d59ccac2e4c5aaaf2a06a15e 352 Gene3D G3DSA:3.40.250.10 2 113 1.0E-27 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS06395 ce071b56d59ccac2e4c5aaaf2a06a15e 352 SUPERFAMILY SSF52821 2 47 9.49E-17 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS06395 ce071b56d59ccac2e4c5aaaf2a06a15e 352 SUPERFAMILY SSF52821 75 117 9.49E-17 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS03715 b7b9b9e45fc953c573ace5831adbc1ac 146 Pfam PF03061 Thioesterase superfamily 29 112 6.8E-17 T 22-04-2016 IPR006683 Thioesterase domain R615_RS03715 b7b9b9e45fc953c573ace5831adbc1ac 146 SUPERFAMILY SSF54637 10 144 4.3E-40 T 22-04-2016 IPR029069 HotDog domain R615_RS03715 b7b9b9e45fc953c573ace5831adbc1ac 146 PANTHER PTHR31793:SF7 1 145 3.2E-60 T 22-04-2016 R615_RS03715 b7b9b9e45fc953c573ace5831adbc1ac 146 PANTHER PTHR31793 1 145 3.2E-60 T 22-04-2016 R615_RS03715 b7b9b9e45fc953c573ace5831adbc1ac 146 Gene3D G3DSA:3.10.129.10 4 145 1.3E-51 T 22-04-2016 IPR029069 HotDog domain R615_RS09815 6a11961742a820679b65afed913673ed 426 PANTHER PTHR11739 40 423 1.7E-196 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09815 6a11961742a820679b65afed913673ed 426 SUPERFAMILY SSF48256 16 424 2.75E-165 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09815 6a11961742a820679b65afed913673ed 426 Pfam PF00285 Citrate synthase, C-terminal domain 48 412 6.3E-135 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09815 6a11961742a820679b65afed913673ed 426 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 R615_RS09815 6a11961742a820679b65afed913673ed 426 Gene3D G3DSA:1.10.230.10 282 375 4.8E-42 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain R615_RS09815 6a11961742a820679b65afed913673ed 426 Gene3D G3DSA:1.10.580.10 53 281 4.1E-98 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 R615_RS09815 6a11961742a820679b65afed913673ed 426 PIRSF PIRSF001369 39 426 2.0E-172 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 R615_RS09815 6a11961742a820679b65afed913673ed 426 PRINTS PR00143 Citrate synthase signature 297 317 2.7E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09815 6a11961742a820679b65afed913673ed 426 PRINTS PR00143 Citrate synthase signature 361 377 2.7E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09815 6a11961742a820679b65afed913673ed 426 PRINTS PR00143 Citrate synthase signature 381 395 2.7E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09815 6a11961742a820679b65afed913673ed 426 PRINTS PR00143 Citrate synthase signature 220 235 2.7E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09815 6a11961742a820679b65afed913673ed 426 PRINTS PR00143 Citrate synthase signature 242 270 2.7E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09815 6a11961742a820679b65afed913673ed 426 PRINTS PR00143 Citrate synthase signature 166 179 2.7E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 R615_RS09815 6a11961742a820679b65afed913673ed 426 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 423 1.5E-234 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 R615_RS00170 98047b0f5df9886b895014926ad73b4a 323 PANTHER PTHR10366 1 323 9.1E-101 T 22-04-2016 R615_RS00170 98047b0f5df9886b895014926ad73b4a 323 SUPERFAMILY SSF51735 2 321 8.77E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00170 98047b0f5df9886b895014926ad73b4a 323 Gene3D G3DSA:3.40.50.720 2 176 2.0E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00170 98047b0f5df9886b895014926ad73b4a 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 247 2.0E-45 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 R615_RS00170 98047b0f5df9886b895014926ad73b4a 323 Gene3D G3DSA:3.90.25.10 177 304 1.9E-33 T 22-04-2016 R615_RS00170 98047b0f5df9886b895014926ad73b4a 323 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 322 2.2E-129 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 R615_RS00170 98047b0f5df9886b895014926ad73b4a 323 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 323 57.487 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 R615_RS00170 98047b0f5df9886b895014926ad73b4a 323 PANTHER PTHR10366:SF469 1 323 9.1E-101 T 22-04-2016 R615_RS04240 2a05888352e119ebcd31d1bb1a706350 161 PANTHER PTHR10516 1 81 5.1E-38 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type R615_RS04240 2a05888352e119ebcd31d1bb1a706350 161 PANTHER PTHR10516 127 161 5.1E-38 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type R615_RS04240 2a05888352e119ebcd31d1bb1a706350 161 SUPERFAMILY SSF54534 3 141 2.75E-34 T 22-04-2016 R615_RS04240 2a05888352e119ebcd31d1bb1a706350 161 Gene3D G3DSA:3.10.50.40 2 70 2.1E-17 T 22-04-2016 R615_RS04240 2a05888352e119ebcd31d1bb1a706350 161 Gene3D G3DSA:3.10.50.40 123 141 2.1E-17 T 22-04-2016 R615_RS04240 2a05888352e119ebcd31d1bb1a706350 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 5.3E-12 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 R615_RS04240 2a05888352e119ebcd31d1bb1a706350 161 PANTHER PTHR10516:SF316 1 81 5.1E-38 T 22-04-2016 R615_RS04240 2a05888352e119ebcd31d1bb1a706350 161 PANTHER PTHR10516:SF316 127 161 5.1E-38 T 22-04-2016 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 Gene3D G3DSA:2.40.30.10 242 339 7.1E-21 T 22-04-2016 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 SUPERFAMILY SSF50465 329 431 3.84E-31 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 SUPERFAMILY SSF50447 241 326 2.29E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 Pfam PF00009 Elongation factor Tu GTP binding domain 23 223 8.1E-46 T 22-04-2016 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 209 1.0E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 430 1.6E-199 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 Gene3D G3DSA:3.40.50.300 8 232 7.8E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 PANTHER PTHR23115 73 349 2.9E-68 T 22-04-2016 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 PANTHER PTHR23115 507 529 2.9E-68 T 22-04-2016 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 PANTHER PTHR23115 11 51 2.9E-68 T 22-04-2016 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 SUPERFAMILY SSF52540 16 232 3.43E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 PRINTS PR00315 GTP-binding elongation factor signature 107 117 1.8E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 PRINTS PR00315 GTP-binding elongation factor signature 87 95 1.8E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 PRINTS PR00315 GTP-binding elongation factor signature 123 134 1.8E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 PRINTS PR00315 GTP-binding elongation factor signature 26 39 1.8E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 PRINTS PR00315 GTP-binding elongation factor signature 160 169 1.8E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 468 52.567 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 R615_RS10825 0c4b563e3216a7e923269439497fcefd 536 Gene3D G3DSA:2.40.30.10 340 431 1.1E-6 T 22-04-2016 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 Pfam PF01433 Peptidase family M1 109 386 4.4E-65 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 872 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 Gene3D G3DSA:1.10.390.10 310 453 2.6E-29 T 22-04-2016 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 PANTHER PTHR11533 611 872 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 PANTHER PTHR11533 6 587 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 SUPERFAMILY SSF55486 205 451 5.68E-73 T 22-04-2016 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 178 193 3.2E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 315 327 3.2E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 260 270 3.2E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 296 311 3.2E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 PANTHER PTHR11533:SF152 611 872 0.0 T 22-04-2016 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 PANTHER PTHR11533:SF152 6 587 0.0 T 22-04-2016 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 SUPERFAMILY SSF63737 5 195 9.81E-42 T 22-04-2016 R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 Pfam PF11940 Domain of unknown function (DUF3458) 461 829 2.6E-133 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal R615_RS11510 4bafb5f706cd46a7c4dd7f264814a390 875 Gene3D G3DSA:1.25.50.10 553 872 5.3E-114 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal R615_RS14175 02f7b932cdcc16aa91b714d58934fd7a 327 SUPERFAMILY SSF103481 46 147 2.22E-10 T 22-04-2016 R615_RS14175 02f7b932cdcc16aa91b714d58934fd7a 327 SUPERFAMILY SSF103481 200 296 4.97E-14 T 22-04-2016 R615_RS14175 02f7b932cdcc16aa91b714d58934fd7a 327 PANTHER PTHR12715 8 299 1.0E-33 T 22-04-2016 R615_RS14175 02f7b932cdcc16aa91b714d58934fd7a 327 Pfam PF00892 EamA-like transporter family 157 290 4.2E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS14175 02f7b932cdcc16aa91b714d58934fd7a 327 Pfam PF00892 EamA-like transporter family 14 145 9.6E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS10555 e6133abe9f3f7cdcb0263d01a97245d0 258 Pfam PF17131 Outer membrane lipoprotein-sorting protein 73 256 1.5E-63 T 22-04-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein R615_RS10555 e6133abe9f3f7cdcb0263d01a97245d0 258 Gene3D G3DSA:2.50.20.10 21 256 7.0E-81 T 22-04-2016 R615_RS14645 2b0503dc160f132ab944e13edcc520c8 127 Gene3D G3DSA:1.10.357.10 5 121 1.2E-6 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 PANTHER PTHR23151:SF68 21 537 1.6E-209 T 22-04-2016 R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 Pfam PF02817 e3 binding domain 242 277 2.6E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 Gene3D G3DSA:3.30.559.10 298 537 1.9E-83 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 SUPERFAMILY SSF51230 120 209 1.3E-16 T 22-04-2016 IPR011053 Single hybrid motif R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 SUPERFAMILY SSF51230 2 92 3.4E-21 T 22-04-2016 IPR011053 Single hybrid motif R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 310 537 2.1E-76 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 Gene3D G3DSA:4.10.320.10 239 288 1.7E-19 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 Pfam PF00364 Biotin-requiring enzyme 3 74 1.6E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 Pfam PF00364 Biotin-requiring enzyme 122 193 7.5E-17 T 22-04-2016 IPR000089 Biotin/lipoyl attachment R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 PANTHER PTHR23151 21 537 1.6E-209 T 22-04-2016 R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 Gene3D G3DSA:2.40.50.100 123 194 2.5E-15 T 22-04-2016 R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 Gene3D G3DSA:2.40.50.100 4 77 1.3E-20 T 22-04-2016 R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 SUPERFAMILY SSF47005 239 281 2.35E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 SUPERFAMILY SSF52777 297 537 8.9E-79 T 22-04-2016 R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 144 173 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site R615_RS13580 7a33fd6452ebd0d55b46ec01ef9bbe67 537 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site R615_RS15160 b19f38a578fc70d7868ba47e1da01e0f 332 PIRSF PIRSF016516 1 330 1.6E-121 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 R615_RS15160 b19f38a578fc70d7868ba47e1da01e0f 332 Pfam PF03561 Allantoicase repeat 188 326 6.6E-42 T 22-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 R615_RS15160 b19f38a578fc70d7868ba47e1da01e0f 332 Pfam PF03561 Allantoicase repeat 20 165 7.0E-44 T 22-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 R615_RS15160 b19f38a578fc70d7868ba47e1da01e0f 332 Hamap MF_00813 Probable allantoicase [alc]. 1 329 44.431 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 R615_RS15160 b19f38a578fc70d7868ba47e1da01e0f 332 PANTHER PTHR12045 8 330 9.8E-130 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 R615_RS15160 b19f38a578fc70d7868ba47e1da01e0f 332 SUPERFAMILY SSF49785 5 167 4.25E-55 T 22-04-2016 IPR008979 Galactose-binding domain-like R615_RS15160 b19f38a578fc70d7868ba47e1da01e0f 332 Gene3D G3DSA:2.60.120.260 173 329 3.0E-48 T 22-04-2016 IPR008979 Galactose-binding domain-like R615_RS15160 b19f38a578fc70d7868ba47e1da01e0f 332 Gene3D G3DSA:2.60.120.260 4 168 8.7E-56 T 22-04-2016 IPR008979 Galactose-binding domain-like R615_RS15160 b19f38a578fc70d7868ba47e1da01e0f 332 TIGRFAM TIGR02961 allantoicase: allantoicase 10 326 1.8E-119 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 R615_RS15160 b19f38a578fc70d7868ba47e1da01e0f 332 SUPERFAMILY SSF49785 177 330 2.3E-48 T 22-04-2016 IPR008979 Galactose-binding domain-like R615_RS01600 4f82d918868bea9089bdeaa0b1fea941 246 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 35.805 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 R615_RS01600 4f82d918868bea9089bdeaa0b1fea941 246 SUPERFAMILY SSF51366 1 237 4.08E-73 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 R615_RS01600 4f82d918868bea9089bdeaa0b1fea941 246 Gene3D G3DSA:3.20.20.70 1 238 1.2E-85 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS01600 4f82d918868bea9089bdeaa0b1fea941 246 PANTHER PTHR21235:SF15 1 239 1.1E-100 T 22-04-2016 R615_RS01600 4f82d918868bea9089bdeaa0b1fea941 246 PANTHER PTHR21235 1 239 1.1E-100 T 22-04-2016 R615_RS01600 4f82d918868bea9089bdeaa0b1fea941 246 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 9.9E-78 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 R615_RS01600 4f82d918868bea9089bdeaa0b1fea941 246 Pfam PF00977 Histidine biosynthesis protein 3 231 1.9E-77 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 R615_RS15280 4e127c673381548c5d0eb81e263c8ade 126 PANTHER PTHR35145 1 118 2.8E-35 T 22-04-2016 R615_RS15280 4e127c673381548c5d0eb81e263c8ade 126 Pfam PF04237 YjbR 12 102 4.3E-22 T 22-04-2016 IPR007351 Uncharacterised protein YjbR R615_RS15280 4e127c673381548c5d0eb81e263c8ade 126 SUPERFAMILY SSF142906 1 115 8.37E-38 T 22-04-2016 R615_RS05575 6dd71185ccf908880da54b93b63d2f9f 344 PIRSF PIRSF001237 1 344 2.7E-136 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS05575 6dd71185ccf908880da54b93b63d2f9f 344 PANTHER PTHR11647:SF59 1 317 6.0E-155 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS05575 6dd71185ccf908880da54b93b63d2f9f 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS05575 6dd71185ccf908880da54b93b63d2f9f 344 Pfam PF01979 Amidohydrolase family 12 310 3.5E-12 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 R615_RS05575 6dd71185ccf908880da54b93b63d2f9f 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 343 6.9E-136 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS05575 6dd71185ccf908880da54b93b63d2f9f 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS05575 6dd71185ccf908880da54b93b63d2f9f 344 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 43.231 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 R615_RS05575 6dd71185ccf908880da54b93b63d2f9f 344 PANTHER PTHR11647 1 317 6.0E-155 T 22-04-2016 R615_RS05575 6dd71185ccf908880da54b93b63d2f9f 344 Gene3D G3DSA:3.20.20.140 2 343 3.9E-129 T 22-04-2016 R615_RS05575 6dd71185ccf908880da54b93b63d2f9f 344 SUPERFAMILY SSF51556 3 343 1.13E-140 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS12930 f7b1e0b52e79b7a7f125ad264cffeff7 355 SUPERFAMILY SSF143865 10 289 4.05E-76 T 22-04-2016 R615_RS12930 f7b1e0b52e79b7a7f125ad264cffeff7 355 PANTHER PTHR21535 56 355 5.9E-65 T 22-04-2016 R615_RS12930 f7b1e0b52e79b7a7f125ad264cffeff7 355 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 31 355 8.2E-93 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 R615_RS12930 f7b1e0b52e79b7a7f125ad264cffeff7 355 Gene3D G3DSA:3.30.460.20 4 163 1.4E-43 T 22-04-2016 R615_RS12930 f7b1e0b52e79b7a7f125ad264cffeff7 355 PANTHER PTHR21535:SF33 56 355 5.9E-65 T 22-04-2016 R615_RS12930 f7b1e0b52e79b7a7f125ad264cffeff7 355 Gene3D G3DSA:1.20.58.340 279 355 3.2E-32 T 22-04-2016 R615_RS12930 f7b1e0b52e79b7a7f125ad264cffeff7 355 SUPERFAMILY SSF144083 290 353 2.35E-22 T 22-04-2016 R615_RS12930 f7b1e0b52e79b7a7f125ad264cffeff7 355 Gene3D G3DSA:1.20.58.340 164 276 1.1E-36 T 22-04-2016 R615_RS12930 f7b1e0b52e79b7a7f125ad264cffeff7 355 Pfam PF01544 CorA-like Mg2+ transporter protein 59 351 1.5E-72 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 R615_RS03920 27aa78ec0d400bd1231af6d3b1f0b4b2 247 Pfam PF00121 Triosephosphate isomerase 5 244 1.1E-88 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 R615_RS03920 27aa78ec0d400bd1231af6d3b1f0b4b2 247 PANTHER PTHR21139 1 247 1.9E-118 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 R615_RS03920 27aa78ec0d400bd1231af6d3b1f0b4b2 247 ProSitePatterns PS00171 Triosephosphate isomerase active site. 163 173 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 R615_RS03920 27aa78ec0d400bd1231af6d3b1f0b4b2 247 SUPERFAMILY SSF51351 1 246 1.17E-87 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 R615_RS03920 27aa78ec0d400bd1231af6d3b1f0b4b2 247 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 247 38.743 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 R615_RS03920 27aa78ec0d400bd1231af6d3b1f0b4b2 247 Gene3D G3DSA:3.20.20.70 1 246 5.8E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS03920 27aa78ec0d400bd1231af6d3b1f0b4b2 247 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 237 2.1E-63 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 R615_RS15500 943a4d75eec93c0fe68e951e0c9a2068 224 Pfam PF14219 Domain of unknown function (DUF4328) 64 206 6.2E-8 T 22-04-2016 IPR025565 Domain of unknown function DUF4328 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 SUPERFAMILY SSF116878 389 464 5.36E-49 T 22-04-2016 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 SUPERFAMILY SSF116878 123 222 5.36E-49 T 22-04-2016 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 318 6.0E-19 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 Pfam PF10396 GTP-binding protein TrmE N-terminus 9 122 4.6E-37 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 Gene3D G3DSA:3.40.50.300 288 386 1.4E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 Pfam PF01926 50S ribosome-binding GTPase 220 345 2.1E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 Gene3D G3DSA:1.20.120.430 249 273 1.4E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 Gene3D G3DSA:1.20.120.430 394 464 1.4E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 Gene3D G3DSA:1.20.120.430 124 184 1.4E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 PANTHER PTHR11649 11 464 8.3E-161 T 22-04-2016 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 Gene3D G3DSA:3.30.1360.120 4 123 9.7E-44 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 8 464 32.932 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 PANTHER PTHR11649:SF56 11 464 8.3E-161 T 22-04-2016 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 Gene3D G3DSA:3.40.50.300 218 248 3.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 SUPERFAMILY SSF52540 206 382 2.07E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 SUPERFAMILY SSF52540 75 172 2.07E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 464 1.3E-99 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 R615_RS17145 97ca770c8ee3e15b5f6e4431ee45f19c 464 Pfam PF12631 MnmE helical domain 125 461 2.8E-58 T 22-04-2016 IPR025867 MnmE, helical domain R615_RS13655 60cb26b8ba692b6833f11396e2a430c5 162 Gene3D G3DSA:3.30.700.10 7 161 1.0E-26 T 22-04-2016 R615_RS13655 60cb26b8ba692b6833f11396e2a430c5 162 Pfam PF13633 Prokaryotic N-terminal methylation site 4 28 1.2E-11 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS13655 60cb26b8ba692b6833f11396e2a430c5 162 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS13655 60cb26b8ba692b6833f11396e2a430c5 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.6E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS13655 60cb26b8ba692b6833f11396e2a430c5 162 SUPERFAMILY SSF54523 7 148 3.92E-20 T 22-04-2016 R615_RS13655 60cb26b8ba692b6833f11396e2a430c5 162 PANTHER PTHR30093 1 71 4.9E-20 T 22-04-2016 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 PRINTS PR00344 Bacterial sensor protein C-terminal signature 936 950 2.1E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 PRINTS PR00344 Bacterial sensor protein C-terminal signature 994 1007 2.1E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 PRINTS PR00344 Bacterial sensor protein C-terminal signature 970 988 2.1E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 Gene3D G3DSA:3.30.565.10 858 1015 1.0E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 SMART SM00448 1032 1143 6.0E-4 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 Gene3D G3DSA:1.10.287.130 784 848 1.9E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 Pfam PF12860 PAS fold 644 758 2.3E-40 T 22-04-2016 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 SUPERFAMILY SSF55785 629 751 7.99E-9 T 22-04-2016 IPR000014 PAS domain R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 Gene3D G3DSA:3.30.450.20 629 752 1.3E-13 T 22-04-2016 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 Pfam PF00512 His Kinase A (phospho-acceptor) domain 791 856 3.0E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 SUPERFAMILY SSF55874 847 1012 1.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 PANTHER PTHR24423 185 204 3.2E-171 T 22-04-2016 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 PANTHER PTHR24423 787 1147 3.2E-171 T 22-04-2016 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 PANTHER PTHR24423 14 63 3.2E-171 T 22-04-2016 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 PANTHER PTHR24423 636 768 3.2E-171 T 22-04-2016 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 Gene3D G3DSA:3.40.50.2300 1036 1147 2.0E-12 T 22-04-2016 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 SUPERFAMILY SSF52172 1034 1148 3.22E-14 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 901 1009 1.8E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 SMART SM00387 900 1010 5.6E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 PANTHER PTHR24423:SF439 185 204 3.2E-171 T 22-04-2016 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 PANTHER PTHR24423:SF439 787 1147 3.2E-171 T 22-04-2016 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 PANTHER PTHR24423:SF439 14 63 3.2E-171 T 22-04-2016 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 PANTHER PTHR24423:SF439 636 768 3.2E-171 T 22-04-2016 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 SUPERFAMILY SSF47384 776 856 1.63E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS11730 d829ecabaa6e4059cc29888b638609b0 1148 SMART SM00388 791 856 2.0E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS09705 e1e59fe5af295a759ee2a13af1d186f5 436 Pfam PF01321 Creatinase/Prolidase N-terminal domain 17 152 9.4E-21 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 R615_RS09705 e1e59fe5af295a759ee2a13af1d186f5 436 PANTHER PTHR10804:SF86 2 25 1.4E-17 T 22-04-2016 R615_RS09705 e1e59fe5af295a759ee2a13af1d186f5 436 PANTHER PTHR10804:SF86 134 345 1.4E-17 T 22-04-2016 R615_RS09705 e1e59fe5af295a759ee2a13af1d186f5 436 PANTHER PTHR10804 2 25 1.4E-17 T 22-04-2016 R615_RS09705 e1e59fe5af295a759ee2a13af1d186f5 436 PANTHER PTHR10804 134 345 1.4E-17 T 22-04-2016 R615_RS09705 e1e59fe5af295a759ee2a13af1d186f5 436 Gene3D G3DSA:3.40.350.10 4 151 2.3E-37 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal R615_RS09705 e1e59fe5af295a759ee2a13af1d186f5 436 Pfam PF00557 Metallopeptidase family M24 160 370 7.5E-33 T 22-04-2016 IPR000994 Peptidase M24, structural domain R615_RS09705 e1e59fe5af295a759ee2a13af1d186f5 436 SUPERFAMILY SSF55920 153 383 1.31E-51 T 22-04-2016 IPR000994 Peptidase M24, structural domain R615_RS09705 e1e59fe5af295a759ee2a13af1d186f5 436 Gene3D G3DSA:3.90.230.10 153 382 3.3E-42 T 22-04-2016 IPR000994 Peptidase M24, structural domain R615_RS09705 e1e59fe5af295a759ee2a13af1d186f5 436 SUPERFAMILY SSF53092 6 151 8.37E-35 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal R615_RS08610 dab8b58a21d48214065717b913baa91d 499 PANTHER PTHR30258:SF9 16 498 2.7E-272 T 22-04-2016 R615_RS08610 dab8b58a21d48214065717b913baa91d 499 Pfam PF00437 Type II/IV secretion system protein 128 392 2.3E-87 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 R615_RS08610 dab8b58a21d48214065717b913baa91d 499 SUPERFAMILY SSF160246 15 79 3.4E-17 T 22-04-2016 R615_RS08610 dab8b58a21d48214065717b913baa91d 499 SUPERFAMILY SSF52540 110 496 3.86E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08610 dab8b58a21d48214065717b913baa91d 499 Gene3D G3DSA:3.40.50.300 232 497 2.1E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08610 dab8b58a21d48214065717b913baa91d 499 PANTHER PTHR30258 16 498 2.7E-272 T 22-04-2016 R615_RS08610 dab8b58a21d48214065717b913baa91d 499 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 15 496 5.0E-209 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 R615_RS08610 dab8b58a21d48214065717b913baa91d 499 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 R615_RS08610 dab8b58a21d48214065717b913baa91d 499 Gene3D G3DSA:3.30.450.90 96 225 2.5E-54 T 22-04-2016 R615_RS08610 dab8b58a21d48214065717b913baa91d 499 SMART SM00382 253 376 1.8E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS14145 a49bfff992080dab6ed44b3641ea7627 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 9.2E-75 T 22-04-2016 IPR010650 PrkA C-terminal domain R615_RS14145 a49bfff992080dab6ed44b3641ea7627 640 PANTHER PTHR30267 1 640 2.1E-270 T 22-04-2016 R615_RS14145 a49bfff992080dab6ed44b3641ea7627 640 PANTHER PTHR30267:SF2 1 640 2.1E-270 T 22-04-2016 R615_RS14145 a49bfff992080dab6ed44b3641ea7627 640 SMART SM00763 19 376 3.1E-208 T 22-04-2016 IPR013153 PrkA AAA domain R615_RS14145 a49bfff992080dab6ed44b3641ea7627 640 PIRSF PIRSF000549 1 640 2.4E-286 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 R615_RS14145 a49bfff992080dab6ed44b3641ea7627 640 SUPERFAMILY SSF52540 75 345 2.1E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14145 a49bfff992080dab6ed44b3641ea7627 640 Pfam PF08298 PrkA AAA domain 19 376 1.5E-174 T 22-04-2016 IPR013153 PrkA AAA domain R615_RS14145 a49bfff992080dab6ed44b3641ea7627 640 Gene3D G3DSA:3.40.50.300 239 325 2.2E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14145 a49bfff992080dab6ed44b3641ea7627 640 Gene3D G3DSA:3.40.50.300 75 154 2.2E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07815 32041f8a57577835865ee3344dec3f90 134 Gene3D G3DSA:2.170.150.20 3 132 1.1E-63 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 R615_RS07815 32041f8a57577835865ee3344dec3f90 134 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 130 5.6E-60 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 R615_RS07815 32041f8a57577835865ee3344dec3f90 134 PANTHER PTHR10173:SF18 6 134 4.7E-63 T 22-04-2016 R615_RS07815 32041f8a57577835865ee3344dec3f90 134 PANTHER PTHR10173 6 134 4.7E-63 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 R615_RS07815 32041f8a57577835865ee3344dec3f90 134 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 38.195 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 R615_RS07815 32041f8a57577835865ee3344dec3f90 134 Pfam PF01641 SelR domain 10 128 3.0E-56 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 R615_RS07815 32041f8a57577835865ee3344dec3f90 134 SUPERFAMILY SSF51316 6 131 4.81E-60 T 22-04-2016 IPR011057 Mss4-like R615_RS05555 36aea239e74fa6b7c0af964655a07834 159 PIRSF PIRSF006092 1 159 4.8E-9 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 R615_RS05555 36aea239e74fa6b7c0af964655a07834 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 158 2.7E-9 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 R615_RS05555 36aea239e74fa6b7c0af964655a07834 159 SUPERFAMILY SSF54534 81 158 4.97E-9 T 22-04-2016 R615_RS05555 36aea239e74fa6b7c0af964655a07834 159 Gene3D G3DSA:3.10.50.30 81 158 1.7E-11 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 R615_RS08515 0e05c651857021be691f8131072e2ae1 92 Gene3D G3DSA:3.40.1260.10 1 89 1.7E-11 T 22-04-2016 IPR027396 DsrEFH-like R615_RS08515 0e05c651857021be691f8131072e2ae1 92 SUPERFAMILY SSF75169 13 91 1.6E-11 T 22-04-2016 IPR027396 DsrEFH-like R615_RS08515 0e05c651857021be691f8131072e2ae1 92 Pfam PF04077 DsrH like protein 11 88 1.9E-10 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 R615_RS01000 c70173e91c330e1661ee3794928f776d 265 Pfam PF02265 S1/P1 Nuclease 25 258 3.6E-60 T 22-04-2016 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 R615_RS01000 c70173e91c330e1661ee3794928f776d 265 SUPERFAMILY SSF48537 25 257 1.44E-55 T 22-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 R615_RS01000 c70173e91c330e1661ee3794928f776d 265 Gene3D G3DSA:1.10.575.10 25 260 7.1E-63 T 22-04-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 R615_RS01000 c70173e91c330e1661ee3794928f776d 265 PANTHER PTHR33146 1 260 1.5E-50 T 22-04-2016 R615_RS00870 9e5a220534cd998c76a5442819989a00 207 Gene3D G3DSA:3.40.50.300 6 29 1.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00870 9e5a220534cd998c76a5442819989a00 207 Gene3D G3DSA:3.40.50.300 89 203 1.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00870 9e5a220534cd998c76a5442819989a00 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 7 185 7.4E-76 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 R615_RS00870 9e5a220534cd998c76a5442819989a00 207 Gene3D G3DSA:3.30.63.10 36 88 3.7E-29 T 22-04-2016 R615_RS00870 9e5a220534cd998c76a5442819989a00 207 PANTHER PTHR23117:SF13 7 200 6.7E-94 T 22-04-2016 R615_RS00870 9e5a220534cd998c76a5442819989a00 207 SUPERFAMILY SSF52540 5 190 9.96E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00870 9e5a220534cd998c76a5442819989a00 207 PANTHER PTHR23117 7 200 6.7E-94 T 22-04-2016 R615_RS00870 9e5a220534cd998c76a5442819989a00 207 Pfam PF00625 Guanylate kinase 9 184 1.2E-57 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit R615_RS00870 9e5a220534cd998c76a5442819989a00 207 Hamap MF_00328 Guanylate kinase [gmk]. 5 188 36.88 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 R615_RS00870 9e5a220534cd998c76a5442819989a00 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 41 58 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 R615_RS00870 9e5a220534cd998c76a5442819989a00 207 SMART SM00072 6 188 3.8E-70 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit R615_RS02925 eda258a71537d15229ff860142d3777e 268 PANTHER PTHR13696:SF1 4 256 2.1E-92 T 22-04-2016 R615_RS02925 eda258a71537d15229ff860142d3777e 268 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 215 8.2E-28 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain R615_RS02925 eda258a71537d15229ff860142d3777e 268 SUPERFAMILY SSF52540 2 266 6.12E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02925 eda258a71537d15229ff860142d3777e 268 PANTHER PTHR13696 4 256 2.1E-92 T 22-04-2016 R615_RS02925 eda258a71537d15229ff860142d3777e 268 Gene3D G3DSA:3.40.50.300 2 244 3.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02925 eda258a71537d15229ff860142d3777e 268 PIRSF PIRSF003092 1 268 4.3E-92 T 22-04-2016 IPR025501 ATP binding protein MinD R615_RS02925 eda258a71537d15229ff860142d3777e 268 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 265 1.6E-111 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 R615_RS12255 e56a9ff3114ad5640edf6d3991306d5b 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 1.1E-41 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 R615_RS12255 e56a9ff3114ad5640edf6d3991306d5b 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 R615_RS12255 e56a9ff3114ad5640edf6d3991306d5b 139 SUPERFAMILY SSF111038 1 139 4.84E-51 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 R615_RS12255 e56a9ff3114ad5640edf6d3991306d5b 139 Gene3D G3DSA:2.60.120.460 1 139 2.1E-59 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 R615_RS12255 e56a9ff3114ad5640edf6d3991306d5b 139 PIRSF PIRSF004681 1 139 1.2E-49 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 R615_RS12255 e56a9ff3114ad5640edf6d3991306d5b 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 13 139 4.0E-44 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 R615_RS12255 e56a9ff3114ad5640edf6d3991306d5b 139 PANTHER PTHR30615 1 139 3.7E-82 T 22-04-2016 R615_RS00725 04227b0d68e5e84742effa45997a66d7 267 PANTHER PTHR24220 21 265 7.4E-134 T 22-04-2016 R615_RS00725 04227b0d68e5e84742effa45997a66d7 267 Gene3D G3DSA:3.40.50.300 20 261 1.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00725 04227b0d68e5e84742effa45997a66d7 267 Pfam PF00005 ABC transporter 36 191 6.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS00725 04227b0d68e5e84742effa45997a66d7 267 PANTHER PTHR24220:SF585 21 265 7.4E-134 T 22-04-2016 R615_RS00725 04227b0d68e5e84742effa45997a66d7 267 SMART SM00382 44 238 6.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS00725 04227b0d68e5e84742effa45997a66d7 267 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 20 267 1.1E-120 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 R615_RS00725 04227b0d68e5e84742effa45997a66d7 267 SUPERFAMILY SSF52540 20 254 1.44E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00725 04227b0d68e5e84742effa45997a66d7 267 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS00055 ca46e9819c2958661881e23e91e1c5b6 276 PANTHER PTHR39456:SF2 1 274 1.5E-55 T 22-04-2016 R615_RS00055 ca46e9819c2958661881e23e91e1c5b6 276 PANTHER PTHR39456 1 274 1.5E-55 T 22-04-2016 R615_RS00055 ca46e9819c2958661881e23e91e1c5b6 276 PIRSF PIRSF007580 2 276 3.7E-63 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS00055 ca46e9819c2958661881e23e91e1c5b6 276 Pfam PF10118 Predicted metal-dependent hydrolase 14 259 1.3E-71 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS14785 ffa7b486d6508cc1a4bcf897295e7033 215 Gene3D G3DSA:3.60.15.10 2 211 1.3E-57 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS14785 ffa7b486d6508cc1a4bcf897295e7033 215 SMART SM00849 14 194 4.9E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS14785 ffa7b486d6508cc1a4bcf897295e7033 215 Pfam PF00753 Metallo-beta-lactamase superfamily 14 192 1.6E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS14785 ffa7b486d6508cc1a4bcf897295e7033 215 SUPERFAMILY SSF56281 5 210 1.06E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS14785 ffa7b486d6508cc1a4bcf897295e7033 215 PANTHER PTHR11935:SF115 1 212 2.3E-107 T 22-04-2016 R615_RS14785 ffa7b486d6508cc1a4bcf897295e7033 215 PANTHER PTHR11935 1 212 2.3E-107 T 22-04-2016 R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 SMART SM00382 340 510 2.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 SMART SM00382 28 226 2.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 ProSitePatterns PS00211 ABC transporters family signature. 437 451 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 Pfam PF12848 ABC transporter 220 289 1.1E-8 T 22-04-2016 IPR032781 ABC-transporter extension domain R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 PANTHER PTHR19211:SF45 1 575 1.1E-211 T 22-04-2016 R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 Pfam PF00005 ABC transporter 332 465 6.7E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 Pfam PF00005 ABC transporter 19 181 2.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 SUPERFAMILY SSF52540 122 233 3.83E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 Pfam PF16326 ABC transporter C-terminal domain 565 634 5.2E-18 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 SUPERFAMILY SSF52540 304 519 1.35E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 PANTHER PTHR19211 1 575 1.1E-211 T 22-04-2016 R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 Gene3D G3DSA:3.40.50.300 314 535 3.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 Gene3D G3DSA:3.40.50.300 2 267 5.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11440 b1f03ae11cf8c8e0fac450b6b206c891 637 SUPERFAMILY SSF52540 5 94 3.83E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06480 4ac1eef6f30670b02c5e4cbb1372efaa 194 PANTHER PTHR23416 31 179 3.7E-26 T 22-04-2016 R615_RS06480 4ac1eef6f30670b02c5e4cbb1372efaa 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 129 161 2.0E-10 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS06480 4ac1eef6f30670b02c5e4cbb1372efaa 194 Gene3D G3DSA:2.160.10.10 78 184 5.5E-28 T 22-04-2016 R615_RS06480 4ac1eef6f30670b02c5e4cbb1372efaa 194 PIRSF PIRSF000441 1 193 1.3E-42 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 R615_RS06480 4ac1eef6f30670b02c5e4cbb1372efaa 194 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 137 165 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 R615_RS06480 4ac1eef6f30670b02c5e4cbb1372efaa 194 SUPERFAMILY SSF51161 25 183 1.66E-34 T 22-04-2016 IPR011004 Trimeric LpxA-like R615_RS05230 3dee61b5de91f179db9b080371bbd390 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 196 350 6.5E-45 T 22-04-2016 IPR000160 GGDEF domain R615_RS05230 3dee61b5de91f179db9b080371bbd390 363 SUPERFAMILY SSF55073 201 353 6.98E-47 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS05230 3dee61b5de91f179db9b080371bbd390 363 PANTHER PTHR10799:SF750 229 351 3.3E-32 T 22-04-2016 R615_RS05230 3dee61b5de91f179db9b080371bbd390 363 PANTHER PTHR10799:SF750 24 173 3.3E-32 T 22-04-2016 R615_RS05230 3dee61b5de91f179db9b080371bbd390 363 Gene3D G3DSA:3.30.70.270 198 353 1.1E-52 T 22-04-2016 R615_RS05230 3dee61b5de91f179db9b080371bbd390 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 353 8.3E-52 T 22-04-2016 IPR000160 GGDEF domain R615_RS05230 3dee61b5de91f179db9b080371bbd390 363 PANTHER PTHR10799 229 351 3.3E-32 T 22-04-2016 R615_RS05230 3dee61b5de91f179db9b080371bbd390 363 PANTHER PTHR10799 24 173 3.3E-32 T 22-04-2016 R615_RS05230 3dee61b5de91f179db9b080371bbd390 363 SMART SM00267 185 354 9.6E-60 T 22-04-2016 IPR000160 GGDEF domain R615_RS12340 bafbfc4b10041433a7e98cd42340662c 220 Gene3D G3DSA:1.20.144.10 46 209 3.2E-17 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase R615_RS12340 bafbfc4b10041433a7e98cd42340662c 220 SUPERFAMILY SSF48317 14 213 1.24E-18 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase R615_RS12340 bafbfc4b10041433a7e98cd42340662c 220 Pfam PF01569 PAP2 superfamily 91 215 5.7E-18 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase R615_RS09180 952dfd6e3999e01188c21ec2f0b5c082 214 PANTHER PTHR14097 3 194 2.9E-50 T 22-04-2016 R615_RS09180 952dfd6e3999e01188c21ec2f0b5c082 214 PANTHER PTHR14097:SF7 3 194 2.9E-50 T 22-04-2016 R615_RS09180 952dfd6e3999e01188c21ec2f0b5c082 214 Gene3D G3DSA:3.40.50.720 5 191 2.2E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09180 952dfd6e3999e01188c21ec2f0b5c082 214 SUPERFAMILY SSF51735 5 192 5.0E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09180 952dfd6e3999e01188c21ec2f0b5c082 214 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 60 4.0E-5 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 R615_RS12200 4f13ffcb14b44a237fd3bfbdbb2975a1 256 SUPERFAMILY SSF50630 111 244 4.81E-40 T 22-04-2016 IPR021109 Aspartic peptidase domain R615_RS12200 4f13ffcb14b44a237fd3bfbdbb2975a1 256 PANTHER PTHR38037 33 256 3.0E-45 T 22-04-2016 R615_RS12200 4f13ffcb14b44a237fd3bfbdbb2975a1 256 Gene3D G3DSA:2.40.70.10 109 238 9.8E-43 T 22-04-2016 IPR021109 Aspartic peptidase domain R615_RS12200 4f13ffcb14b44a237fd3bfbdbb2975a1 256 Pfam PF05618 Putative ATP-dependant zinc protease 111 246 1.1E-38 T 22-04-2016 R615_RS04730 fd4479a6f17c9b9e6d00106d11a76324 250 PANTHER PTHR34136:SF1 3 250 3.3E-73 T 22-04-2016 R615_RS04730 fd4479a6f17c9b9e6d00106d11a76324 250 PANTHER PTHR34136 3 250 3.3E-73 T 22-04-2016 R615_RS04730 fd4479a6f17c9b9e6d00106d11a76324 250 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 54 229 1.4E-51 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 R615_RS04730 fd4479a6f17c9b9e6d00106d11a76324 250 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 58 228 8.5E-56 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 R615_RS13435 1ce709ac2a70931d9c35e848171da303 919 Gene3D G3DSA:3.40.50.300 8 241 2.1E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13435 1ce709ac2a70931d9c35e848171da303 919 Gene3D G3DSA:3.40.50.300 272 499 1.6E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13435 1ce709ac2a70931d9c35e848171da303 919 PANTHER PTHR24220:SF388 14 395 9.6E-193 T 22-04-2016 R615_RS13435 1ce709ac2a70931d9c35e848171da303 919 Pfam PF00005 ABC transporter 28 175 1.8E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS13435 1ce709ac2a70931d9c35e848171da303 919 Pfam PF00005 ABC transporter 293 435 3.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS13435 1ce709ac2a70931d9c35e848171da303 919 SUPERFAMILY SSF52540 259 499 3.24E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13435 1ce709ac2a70931d9c35e848171da303 919 SMART SM00382 37 233 4.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS13435 1ce709ac2a70931d9c35e848171da303 919 SMART SM00382 301 491 6.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS13435 1ce709ac2a70931d9c35e848171da303 919 PANTHER PTHR24220 14 395 9.6E-193 T 22-04-2016 R615_RS13435 1ce709ac2a70931d9c35e848171da303 919 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS13435 1ce709ac2a70931d9c35e848171da303 919 Pfam PF12698 ABC-2 family transporter protein 570 912 6.1E-41 T 22-04-2016 R615_RS13435 1ce709ac2a70931d9c35e848171da303 919 SUPERFAMILY SSF52540 11 239 8.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15850 7d01bd8da5a013adee96622f4f973e54 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 84 108 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15850 7d01bd8da5a013adee96622f4f973e54 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 2 111 28.482 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 R615_RS15850 7d01bd8da5a013adee96622f4f973e54 111 PANTHER PTHR13501 3 110 1.3E-49 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 R615_RS15850 7d01bd8da5a013adee96622f4f973e54 111 Gene3D G3DSA:3.90.470.10 3 111 3.0E-42 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 R615_RS15850 7d01bd8da5a013adee96622f4f973e54 111 Pfam PF00237 Ribosomal protein L22p/L17e 10 108 4.2E-32 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 R615_RS15850 7d01bd8da5a013adee96622f4f973e54 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 6 108 2.0E-46 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 R615_RS15850 7d01bd8da5a013adee96622f4f973e54 111 SUPERFAMILY SSF54843 3 111 1.44E-41 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 R615_RS16560 a365d99830d46dd5e8180e9f79538b37 398 PANTHER PTHR11061:SF12 4 398 5.1E-96 T 22-04-2016 R615_RS16560 a365d99830d46dd5e8180e9f79538b37 398 SUPERFAMILY SSF53335 85 391 4.33E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS16560 a365d99830d46dd5e8180e9f79538b37 398 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 142 337 1.0E-14 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 R615_RS16560 a365d99830d46dd5e8180e9f79538b37 398 Gene3D G3DSA:3.30.750.80 77 178 1.4E-29 T 22-04-2016 R615_RS16560 a365d99830d46dd5e8180e9f79538b37 398 SUPERFAMILY SSF88697 3 75 6.21E-10 T 22-04-2016 IPR015947 PUA-like domain R615_RS16560 a365d99830d46dd5e8180e9f79538b37 398 PANTHER PTHR11061 4 398 5.1E-96 T 22-04-2016 R615_RS16560 a365d99830d46dd5e8180e9f79538b37 398 Gene3D G3DSA:2.30.130.10 4 74 8.1E-14 T 22-04-2016 IPR015947 PUA-like domain R615_RS16560 a365d99830d46dd5e8180e9f79538b37 398 Gene3D G3DSA:3.40.50.150 187 394 1.8E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS15690 a2245cd9d444ed4423d087fd33171c5a 126 PANTHER PTHR12231 33 113 1.2E-12 T 22-04-2016 R615_RS15690 a2245cd9d444ed4423d087fd33171c5a 126 Gene3D G3DSA:3.40.250.10 6 116 3.1E-30 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS15690 a2245cd9d444ed4423d087fd33171c5a 126 SMART SM00450 18 117 6.2E-23 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS15690 a2245cd9d444ed4423d087fd33171c5a 126 Pfam PF00581 Rhodanese-like domain 20 112 9.2E-18 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS15690 a2245cd9d444ed4423d087fd33171c5a 126 SUPERFAMILY SSF52821 10 118 6.55E-32 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS15690 a2245cd9d444ed4423d087fd33171c5a 126 PANTHER PTHR12231:SF91 33 113 1.2E-12 T 22-04-2016 R615_RS03415 742cb2fa9cd95c71c57a91a6d116e8e5 586 SUPERFAMILY SSF55073 414 581 7.22E-44 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS03415 742cb2fa9cd95c71c57a91a6d116e8e5 586 Pfam PF00990 Diguanylate cyclase, GGDEF domain 410 579 5.2E-43 T 22-04-2016 IPR000160 GGDEF domain R615_RS03415 742cb2fa9cd95c71c57a91a6d116e8e5 586 PANTHER PTHR10799 176 334 4.1E-25 T 22-04-2016 R615_RS03415 742cb2fa9cd95c71c57a91a6d116e8e5 586 SMART SM00267 398 584 9.7E-58 T 22-04-2016 IPR000160 GGDEF domain R615_RS03415 742cb2fa9cd95c71c57a91a6d116e8e5 586 PANTHER PTHR10799 442 581 4.1E-25 T 22-04-2016 R615_RS03415 742cb2fa9cd95c71c57a91a6d116e8e5 586 Gene3D G3DSA:3.30.70.270 412 581 2.9E-50 T 22-04-2016 R615_RS03415 742cb2fa9cd95c71c57a91a6d116e8e5 586 PANTHER PTHR10799:SF728 442 581 4.1E-25 T 22-04-2016 R615_RS03415 742cb2fa9cd95c71c57a91a6d116e8e5 586 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 405 582 2.3E-48 T 22-04-2016 IPR000160 GGDEF domain R615_RS03415 742cb2fa9cd95c71c57a91a6d116e8e5 586 PANTHER PTHR10799:SF728 176 334 4.1E-25 T 22-04-2016 R615_RS15115 818aa38002c6221ea26fd2739650a05c 307 SUPERFAMILY SSF46689 208 257 1.54E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS15115 818aa38002c6221ea26fd2739650a05c 307 PANTHER PTHR11019 210 307 1.5E-26 T 22-04-2016 R615_RS15115 818aa38002c6221ea26fd2739650a05c 307 SMART SM00342 222 304 1.6E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS15115 818aa38002c6221ea26fd2739650a05c 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 288 304 1.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS15115 818aa38002c6221ea26fd2739650a05c 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 288 1.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS15115 818aa38002c6221ea26fd2739650a05c 307 Gene3D G3DSA:1.10.10.60 202 258 1.1E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS15115 818aa38002c6221ea26fd2739650a05c 307 SUPERFAMILY SSF46689 258 305 1.76E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS15115 818aa38002c6221ea26fd2739650a05c 307 Pfam PF06719 AraC-type transcriptional regulator N-terminus 36 191 1.5E-24 T 22-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal R615_RS15115 818aa38002c6221ea26fd2739650a05c 307 Pfam PF12833 Helix-turn-helix domain 228 306 1.5E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS15115 818aa38002c6221ea26fd2739650a05c 307 Gene3D G3DSA:1.10.10.60 259 303 8.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS04040 270eddc3b7c7475290e858e7840c28ff 508 Pfam PF02646 RmuC family 182 477 7.8E-100 T 22-04-2016 IPR003798 DNA recombination RmuC R615_RS04040 270eddc3b7c7475290e858e7840c28ff 508 PANTHER PTHR30563 1 505 3.3E-102 T 22-04-2016 R615_RS05250 075a38776cd142b2ab873244227ed6ce 136 PANTHER PTHR38037 5 132 1.5E-41 T 22-04-2016 R615_RS05250 075a38776cd142b2ab873244227ed6ce 136 Gene3D G3DSA:2.40.70.10 3 132 6.1E-41 T 22-04-2016 IPR021109 Aspartic peptidase domain R615_RS05250 075a38776cd142b2ab873244227ed6ce 136 Pfam PF05618 Putative ATP-dependant zinc protease 5 133 1.3E-34 T 22-04-2016 R615_RS05250 075a38776cd142b2ab873244227ed6ce 136 SUPERFAMILY SSF50630 5 134 4.87E-40 T 22-04-2016 IPR021109 Aspartic peptidase domain R615_RS03895 8adb7ae1979f406553910084b7cfbfb2 101 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 90 3.0E-21 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 R615_RS03895 8adb7ae1979f406553910084b7cfbfb2 101 PANTHER PTHR40065:SF1 1 100 1.2E-19 T 22-04-2016 R615_RS03895 8adb7ae1979f406553910084b7cfbfb2 101 Pfam PF01985 CRS1 / YhbY (CRM) domain 4 86 7.7E-17 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 R615_RS03895 8adb7ae1979f406553910084b7cfbfb2 101 PANTHER PTHR40065 1 100 1.2E-19 T 22-04-2016 R615_RS03895 8adb7ae1979f406553910084b7cfbfb2 101 SUPERFAMILY SSF75471 1 96 3.14E-25 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 R615_RS03895 8adb7ae1979f406553910084b7cfbfb2 101 SMART SM01103 3 86 5.3E-32 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 R615_RS03895 8adb7ae1979f406553910084b7cfbfb2 101 Gene3D G3DSA:3.30.110.60 2 96 6.4E-25 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 R615_RS10350 b9f3d4a66b7f6ffd6b5f4a563dc40dd1 97 SUPERFAMILY SSF46689 2 90 1.15E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS10350 b9f3d4a66b7f6ffd6b5f4a563dc40dd1 97 Gene3D G3DSA:1.10.10.60 8 85 3.9E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS10350 b9f3d4a66b7f6ffd6b5f4a563dc40dd1 97 Pfam PF01527 Transposase 4 70 1.4E-15 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 R615_RS10350 b9f3d4a66b7f6ffd6b5f4a563dc40dd1 97 PANTHER PTHR33215 1 96 3.6E-24 T 22-04-2016 R615_RS13590 72e7e94cf5ad908ba1451bb1b17382f4 205 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 36 205 8.8E-54 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 R615_RS13590 72e7e94cf5ad908ba1451bb1b17382f4 205 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 8 29 1.3E-6 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 R615_RS13590 72e7e94cf5ad908ba1451bb1b17382f4 205 PANTHER PTHR30069 8 205 1.3E-50 T 22-04-2016 R615_RS13590 72e7e94cf5ad908ba1451bb1b17382f4 205 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 32 205 2.7E-57 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 R615_RS13590 72e7e94cf5ad908ba1451bb1b17382f4 205 SUPERFAMILY SSF52540 15 205 3.08E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13590 72e7e94cf5ad908ba1451bb1b17382f4 205 PIRSF PIRSF015617 9 205 5.9E-61 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 R615_RS13590 72e7e94cf5ad908ba1451bb1b17382f4 205 Gene3D G3DSA:3.40.50.300 10 205 2.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05740 b80cff19a34ee90e2daa5c48561244f9 342 Gene3D G3DSA:3.30.60.70 130 170 1.7E-18 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 R615_RS05740 b80cff19a34ee90e2daa5c48561244f9 342 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 252 284 4.3E-14 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS05740 b80cff19a34ee90e2daa5c48561244f9 342 SUPERFAMILY SSF51161 87 322 4.44E-39 T 22-04-2016 IPR011004 Trimeric LpxA-like R615_RS05740 b80cff19a34ee90e2daa5c48561244f9 342 Gene3D G3DSA:2.160.10.10 171 339 1.5E-34 T 22-04-2016 R615_RS05740 b80cff19a34ee90e2daa5c48561244f9 342 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 130 170 1.1E-15 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 R615_RS05740 b80cff19a34ee90e2daa5c48561244f9 342 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 342 5.9E-182 T 22-04-2016 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117|UniPathway: UPA00034 R615_RS05740 b80cff19a34ee90e2daa5c48561244f9 342 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 339 43.989 T 22-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 SMART SM00434 15 465 1.9E-231 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 SUPERFAMILY SSF56719 35 487 8.11E-155 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 Gene3D G3DSA:1.10.268.10 366 463 1.3E-29 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 Gene3D G3DSA:3.90.199.10 38 221 1.6E-74 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 651 683 2.5E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 639 4.8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 PANTHER PTHR10169 4 529 0.0 T 22-04-2016 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 471 2.1E-133 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 744 0.0 T 22-04-2016 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 SUPERFAMILY SSF101904 501 745 4.45E-53 T 22-04-2016 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 Gene3D G3DSA:2.120.10.90 500 740 5.2E-29 T 22-04-2016 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 33.808 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 Gene3D G3DSA:3.30.1360.40 242 335 1.6E-23 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain R615_RS00120 405a6830f1d36b705078ec96ceabcd6c 753 PANTHER PTHR10169:SF30 4 529 0.0 T 22-04-2016 R615_RS06445 30fd383f25949f011880c1a86d5c837f 76 Pfam PF00550 Phosphopantetheine attachment site 27 69 1.4E-5 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain R615_RS06445 30fd383f25949f011880c1a86d5c837f 76 SUPERFAMILY SSF47336 3 74 1.57E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain R615_RS06445 30fd383f25949f011880c1a86d5c837f 76 Gene3D G3DSA:1.10.1200.10 4 73 2.6E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain R615_RS05800 58fd62c3232ec0ce2042898a4e62de84 155 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 130 3.2E-28 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type R615_RS05800 58fd62c3232ec0ce2042898a4e62de84 155 Pfam PF02082 Transcriptional regulator 3 82 6.4E-19 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type R615_RS05800 58fd62c3232ec0ce2042898a4e62de84 155 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site R615_RS05800 58fd62c3232ec0ce2042898a4e62de84 155 PANTHER PTHR33221:SF2 3 136 1.3E-38 T 22-04-2016 R615_RS05800 58fd62c3232ec0ce2042898a4e62de84 155 SUPERFAMILY SSF46785 3 133 9.94E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05800 58fd62c3232ec0ce2042898a4e62de84 155 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 1.1E-44 T 22-04-2016 IPR014290 SUF system FeS cluster assembly regulator R615_RS05800 58fd62c3232ec0ce2042898a4e62de84 155 PANTHER PTHR33221 3 136 1.3E-38 T 22-04-2016 R615_RS05800 58fd62c3232ec0ce2042898a4e62de84 155 Gene3D G3DSA:1.10.10.10 3 134 2.6E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS09005 412e2becb8fe211d72864ada087dc612 208 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 131 204 4.6E-15 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 R615_RS09005 412e2becb8fe211d72864ada087dc612 208 PRINTS PR01374 Gram-negative bacterial tonB protein signature 164 181 1.8E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 R615_RS09005 412e2becb8fe211d72864ada087dc612 208 PRINTS PR01374 Gram-negative bacterial tonB protein signature 124 145 1.8E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 R615_RS09005 412e2becb8fe211d72864ada087dc612 208 PRINTS PR01374 Gram-negative bacterial tonB protein signature 145 163 1.8E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 R615_RS09005 412e2becb8fe211d72864ada087dc612 208 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 204 8.3E-19 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 R615_RS09005 412e2becb8fe211d72864ada087dc612 208 SUPERFAMILY SSF74653 121 204 7.46E-24 T 22-04-2016 R615_RS09005 412e2becb8fe211d72864ada087dc612 208 PANTHER PTHR33446:SF1 34 204 3.0E-19 T 22-04-2016 R615_RS09005 412e2becb8fe211d72864ada087dc612 208 PANTHER PTHR33446 34 204 3.0E-19 T 22-04-2016 R615_RS09005 412e2becb8fe211d72864ada087dc612 208 Gene3D G3DSA:3.30.1150.10 129 204 1.2E-9 T 22-04-2016 R615_RS11630 97884707b890ac145eef931166e597a8 121 Pfam PF00462 Glutaredoxin 47 98 1.2E-5 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 R615_RS11630 97884707b890ac145eef931166e597a8 121 Gene3D G3DSA:3.40.30.10 49 119 2.3E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11630 97884707b890ac145eef931166e597a8 121 SUPERFAMILY SSF52833 41 119 2.93E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS16665 8880144ccc2b448409876ed70af8f9de 110 PANTHER PTHR33931 3 104 5.7E-15 T 22-04-2016 R615_RS16665 8880144ccc2b448409876ed70af8f9de 110 PANTHER PTHR33931:SF2 3 104 5.7E-15 T 22-04-2016 R615_RS16665 8880144ccc2b448409876ed70af8f9de 110 Pfam PF03788 LrgA family 12 104 1.3E-18 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 R615_RS01795 0e4ba97977db2d2602807787ac8e8a52 290 Pfam PF13672 Protein phosphatase 2C 21 224 1.2E-17 T 22-04-2016 R615_RS01795 0e4ba97977db2d2602807787ac8e8a52 290 SMART SM00331 15 259 5.1E-31 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS01795 0e4ba97977db2d2602807787ac8e8a52 290 Gene3D G3DSA:3.60.40.10 8 259 1.6E-64 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS01795 0e4ba97977db2d2602807787ac8e8a52 290 SUPERFAMILY SSF81606 9 258 4.19E-58 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS01795 0e4ba97977db2d2602807787ac8e8a52 290 PANTHER PTHR13832 9 259 1.2E-56 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 R615_RS01795 0e4ba97977db2d2602807787ac8e8a52 290 PANTHER PTHR13832:SF278 9 259 1.2E-56 T 22-04-2016 R615_RS01795 0e4ba97977db2d2602807787ac8e8a52 290 SMART SM00332 1 257 1.0E-24 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS12100 b5eaacfded65911a5ff71f42b8cf42b0 452 Pfam PF07044 Protein of unknown function (DUF1329) 84 447 7.5E-133 T 22-04-2016 IPR010752 Protein of unknown function DUF1329 R615_RS12100 b5eaacfded65911a5ff71f42b8cf42b0 452 Gene3D G3DSA:2.50.20.10 158 306 1.1E-32 T 22-04-2016 R615_RS12100 b5eaacfded65911a5ff71f42b8cf42b0 452 Gene3D G3DSA:2.50.20.10 339 447 1.1E-32 T 22-04-2016 R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 Pfam PF02926 THUMP domain 57 165 8.4E-17 T 22-04-2016 IPR004114 THUMP domain GO:0003723 R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 385 482 9.1E-29 T 22-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 SUPERFAMILY SSF52821 411 478 5.5E-5 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 SUPERFAMILY SSF143437 1 175 1.34E-38 T 22-04-2016 R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 SMART SM00981 76 167 7.2E-19 T 22-04-2016 IPR004114 THUMP domain GO:0003723 R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 PANTHER PTHR14911 3 419 1.4E-179 T 22-04-2016 R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 PANTHER PTHR14911:SF15 3 419 1.4E-179 T 22-04-2016 R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 492 161.723 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 Gene3D G3DSA:3.40.250.10 411 477 3.4E-6 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 371 9.5E-101 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 SUPERFAMILY SSF52402 176 374 3.75E-37 T 22-04-2016 R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 177 370 2.3E-63 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 R615_RS08975 988b96b7998b13705e6fcd1805c6a815 492 Gene3D G3DSA:3.40.50.620 175 334 9.2E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS04135 994c6a946a03544df87ad5e1395c8d28 348 SUPERFAMILY SSF56317 11 275 7.85E-53 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS04135 994c6a946a03544df87ad5e1395c8d28 348 PANTHER PTHR23088 1 283 1.7E-160 T 22-04-2016 R615_RS04135 994c6a946a03544df87ad5e1395c8d28 348 Pfam PF00795 Carbon-nitrogen hydrolase 15 268 3.3E-48 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS04135 994c6a946a03544df87ad5e1395c8d28 348 Hamap MF_01242 Aliphatic amidase [amiE]. 1 340 84.406 T 22-04-2016 IPR023719 Aliphatic amidase GO:0004040 KEGG: 00330+3.5.1.4|KEGG: 00360+3.5.1.4|KEGG: 00380+3.5.1.4|KEGG: 00627+3.5.1.4|KEGG: 00643+3.5.1.4|MetaCyc: PWY-3161|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 R615_RS04135 994c6a946a03544df87ad5e1395c8d28 348 PANTHER PTHR23088:SF32 1 283 1.7E-160 T 22-04-2016 R615_RS04135 994c6a946a03544df87ad5e1395c8d28 348 Gene3D G3DSA:3.60.110.10 6 275 4.4E-50 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 9.0E-65 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 SUPERFAMILY SSF47240 1 154 7.0E-45 T 22-04-2016 IPR009078 Ferritin-like superfamily R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 PANTHER PTHR30295:SF9 1 154 9.7E-43 T 22-04-2016 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 PRINTS PR00601 Bacterioferritin signature 44 64 1.7E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 PRINTS PR00601 Bacterioferritin signature 65 85 1.7E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 PRINTS PR00601 Bacterioferritin signature 23 43 1.7E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 PRINTS PR00601 Bacterioferritin signature 107 127 1.7E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 PRINTS PR00601 Bacterioferritin signature 86 106 1.7E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 PRINTS PR00601 Bacterioferritin signature 128 149 1.7E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 PRINTS PR00601 Bacterioferritin signature 3 22 1.7E-58 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 Gene3D G3DSA:1.20.1260.10 1 154 5.6E-53 T 22-04-2016 IPR012347 Ferritin-related R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 PIRSF PIRSF002560 1 154 4.3E-63 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 PANTHER PTHR30295 1 154 9.7E-43 T 22-04-2016 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12210 399e4918ae4247fdc62063ffc37f8102 154 Pfam PF00210 Ferritin-like domain 10 142 7.8E-31 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 R615_RS08685 5407f70d12ab4391eccb9c5bc875a3bf 562 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 11 561 9.5E-154 T 22-04-2016 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 R615_RS08685 5407f70d12ab4391eccb9c5bc875a3bf 562 Pfam PF00343 Carbohydrate phosphorylase 28 84 1.3E-5 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 R615_RS08685 5407f70d12ab4391eccb9c5bc875a3bf 562 Pfam PF00343 Carbohydrate phosphorylase 244 487 5.7E-26 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 R615_RS08685 5407f70d12ab4391eccb9c5bc875a3bf 562 Gene3D G3DSA:3.40.50.2000 18 303 1.8E-48 T 22-04-2016 R615_RS08685 5407f70d12ab4391eccb9c5bc875a3bf 562 PANTHER PTHR11468 10 518 7.5E-186 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 R615_RS08685 5407f70d12ab4391eccb9c5bc875a3bf 562 PANTHER PTHR11468:SF9 10 518 7.5E-186 T 22-04-2016 R615_RS08685 5407f70d12ab4391eccb9c5bc875a3bf 562 SUPERFAMILY SSF53756 8 561 1.06E-150 T 22-04-2016 R615_RS08685 5407f70d12ab4391eccb9c5bc875a3bf 562 Gene3D G3DSA:3.40.50.2000 304 560 6.2E-68 T 22-04-2016 R615_RS05715 79603bee0ebc03b0505111ae7dcde848 621 SMART SM00283 358 619 4.1E-61 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS05715 79603bee0ebc03b0505111ae7dcde848 621 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 418 618 9.4E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS05715 79603bee0ebc03b0505111ae7dcde848 621 Pfam PF00672 HAMP domain 271 335 3.6E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS05715 79603bee0ebc03b0505111ae7dcde848 621 SMART SM00304 290 343 0.0012 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS05715 79603bee0ebc03b0505111ae7dcde848 621 SUPERFAMILY SSF58104 311 620 1.1E-70 T 22-04-2016 R615_RS05715 79603bee0ebc03b0505111ae7dcde848 621 PANTHER PTHR32089 159 211 4.1E-101 T 22-04-2016 R615_RS05715 79603bee0ebc03b0505111ae7dcde848 621 PANTHER PTHR32089 264 621 4.1E-101 T 22-04-2016 R615_RS05715 79603bee0ebc03b0505111ae7dcde848 621 SMART SM01358 31 268 3.0E-18 T 22-04-2016 IPR032255 Helical bimodular sensor domain R615_RS05715 79603bee0ebc03b0505111ae7dcde848 621 Gene3D G3DSA:1.10.287.950 373 587 5.9E-54 T 22-04-2016 R615_RS00595 6d7064c5700673baf7034ce297a75520 173 Pfam PF01327 Polypeptide deformylase 4 153 1.4E-53 T 22-04-2016 IPR023635 Peptide deformylase R615_RS00595 6d7064c5700673baf7034ce297a75520 173 Hamap MF_00163 Peptide deformylase [def]. 2 163 30.376 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 R615_RS00595 6d7064c5700673baf7034ce297a75520 173 PANTHER PTHR10458:SF10 1 169 2.6E-92 T 22-04-2016 R615_RS00595 6d7064c5700673baf7034ce297a75520 173 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 9.4E-58 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 R615_RS00595 6d7064c5700673baf7034ce297a75520 173 PIRSF PIRSF004749 1 172 2.7E-57 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 R615_RS00595 6d7064c5700673baf7034ce297a75520 173 SUPERFAMILY SSF56420 2 165 1.44E-62 T 22-04-2016 IPR023635 Peptide deformylase R615_RS00595 6d7064c5700673baf7034ce297a75520 173 PANTHER PTHR10458 1 169 2.6E-92 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 R615_RS00595 6d7064c5700673baf7034ce297a75520 173 PRINTS PR01576 Peptide deformylase signature 102 120 1.5E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 R615_RS00595 6d7064c5700673baf7034ce297a75520 173 PRINTS PR01576 Peptide deformylase signature 90 101 1.5E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 R615_RS00595 6d7064c5700673baf7034ce297a75520 173 PRINTS PR01576 Peptide deformylase signature 121 150 1.5E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 R615_RS00595 6d7064c5700673baf7034ce297a75520 173 PRINTS PR01576 Peptide deformylase signature 33 62 1.5E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 R615_RS00595 6d7064c5700673baf7034ce297a75520 173 Gene3D G3DSA:3.90.45.10 5 167 3.2E-65 T 22-04-2016 IPR023635 Peptide deformylase R615_RS13395 6802c3654206f1fc931758f9d0f8ece0 343 PANTHER PTHR37326 11 338 1.3E-100 T 22-04-2016 R615_RS13395 6802c3654206f1fc931758f9d0f8ece0 343 PIRSF PIRSF039012 2 326 1.8E-84 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 R615_RS13395 6802c3654206f1fc931758f9d0f8ece0 343 Gene3D G3DSA:3.40.630.10 42 231 6.7E-25 T 22-04-2016 R615_RS13395 6802c3654206f1fc931758f9d0f8ece0 343 SUPERFAMILY SSF53187 22 320 5.29E-73 T 22-04-2016 R615_RS13395 6802c3654206f1fc931758f9d0f8ece0 343 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 49 318 3.0E-57 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 R615_RS13395 6802c3654206f1fc931758f9d0f8ece0 343 PANTHER PTHR37326:SF1 11 338 1.3E-100 T 22-04-2016 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 3.9E-8 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 Gene3D G3DSA:3.20.190.10 2 129 8.2E-36 T 22-04-2016 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 113 3.6E-29 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 SUPERFAMILY SSF46946 130 221 5.59E-28 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 SUPERFAMILY SSF57716 217 268 1.57E-15 T 22-04-2016 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 SMART SM00898 2 115 1.0E-50 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.0E-22 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 SMART SM01232 129 221 5.7E-45 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 SUPERFAMILY SSF81624 2 138 1.14E-39 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 PANTHER PTHR22993 1 269 8.7E-121 T 22-04-2016 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 Gene3D G3DSA:1.10.8.50 130 269 2.5E-46 T 22-04-2016 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 6.4E-89 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 PANTHER PTHR22993:SF15 1 269 8.7E-121 T 22-04-2016 R615_RS00945 2f5b0651532943a2fafb54a46ec58ac2 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 41.573 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 R615_RS15855 221c6f01c1cb15eb484690e9a9f51805 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 1.9E-44 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 R615_RS15855 221c6f01c1cb15eb484690e9a9f51805 91 PANTHER PTHR11880 2 91 1.8E-51 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 R615_RS15855 221c6f01c1cb15eb484690e9a9f51805 91 Pfam PF00203 Ribosomal protein S19 3 83 4.3E-37 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 R615_RS15855 221c6f01c1cb15eb484690e9a9f51805 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 R615_RS15855 221c6f01c1cb15eb484690e9a9f51805 91 SUPERFAMILY SSF54570 3 83 2.62E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 R615_RS15855 221c6f01c1cb15eb484690e9a9f51805 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.881 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 R615_RS15855 221c6f01c1cb15eb484690e9a9f51805 91 PIRSF PIRSF002144 1 91 1.5E-31 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 R615_RS15855 221c6f01c1cb15eb484690e9a9f51805 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.3E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 R615_RS15855 221c6f01c1cb15eb484690e9a9f51805 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.3E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 R615_RS15855 221c6f01c1cb15eb484690e9a9f51805 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.3E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 R615_RS15855 221c6f01c1cb15eb484690e9a9f51805 91 Gene3D G3DSA:3.30.860.10 2 90 2.7E-40 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 R615_RS02650 96e30ef57846a00e3e1097abc2f099a1 470 PANTHER PTHR13285 1 442 6.2E-100 T 22-04-2016 R615_RS02650 96e30ef57846a00e3e1097abc2f099a1 470 PIRSF PIRSF016636 1 470 7.1E-141 T 22-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB R615_RS02650 96e30ef57846a00e3e1097abc2f099a1 470 PIRSF PIRSF500217 1 470 1.4E-143 T 22-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 R615_RS02650 96e30ef57846a00e3e1097abc2f099a1 470 PANTHER PTHR13285:SF24 1 442 6.2E-100 T 22-04-2016 R615_RS02650 96e30ef57846a00e3e1097abc2f099a1 470 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 96 348 3.7E-18 T 22-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT R615_RS17485 a47f1bec812b18926ab6dad6dc602fbf 244 PANTHER PTHR10438:SF281 6 111 1.2E-18 T 22-04-2016 R615_RS17485 a47f1bec812b18926ab6dad6dc602fbf 244 PANTHER PTHR10438:SF281 211 232 1.2E-18 T 22-04-2016 R615_RS17485 a47f1bec812b18926ab6dad6dc602fbf 244 SUPERFAMILY SSF52833 4 110 7.58E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS17485 a47f1bec812b18926ab6dad6dc602fbf 244 Pfam PF00085 Thioredoxin 7 106 7.7E-18 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 R615_RS17485 a47f1bec812b18926ab6dad6dc602fbf 244 Gene3D G3DSA:3.40.30.10 4 108 4.6E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS17485 a47f1bec812b18926ab6dad6dc602fbf 244 PANTHER PTHR10438 6 111 1.2E-18 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 R615_RS17485 a47f1bec812b18926ab6dad6dc602fbf 244 PANTHER PTHR10438 211 232 1.2E-18 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 R615_RS06635 39c01067ae75242d02611cf87c85731c 227 Gene3D G3DSA:1.20.1050.10 90 225 2.2E-13 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS06635 39c01067ae75242d02611cf87c85731c 227 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 78 1.9E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 R615_RS06635 39c01067ae75242d02611cf87c85731c 227 SUPERFAMILY SSF52833 3 103 2.56E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS06635 39c01067ae75242d02611cf87c85731c 227 PANTHER PTHR11260 1 113 6.8E-27 T 22-04-2016 R615_RS06635 39c01067ae75242d02611cf87c85731c 227 PANTHER PTHR11260 155 225 6.8E-27 T 22-04-2016 R615_RS06635 39c01067ae75242d02611cf87c85731c 227 Pfam PF00043 Glutathione S-transferase, C-terminal domain 170 224 2.1E-5 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal R615_RS06635 39c01067ae75242d02611cf87c85731c 227 Gene3D G3DSA:3.40.30.10 2 89 5.6E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS06635 39c01067ae75242d02611cf87c85731c 227 SUPERFAMILY SSF47616 76 225 1.54E-13 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS02410 76d59688887edab2c7a6fa26defca6ca 180 SMART SM00479 6 179 8.5E-32 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III R615_RS02410 76d59688887edab2c7a6fa26defca6ca 180 SUPERFAMILY SSF53098 4 178 2.82E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS02410 76d59688887edab2c7a6fa26defca6ca 180 Hamap MF_00045 Oligoribonuclease [orn]. 2 180 42.559 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 R615_RS02410 76d59688887edab2c7a6fa26defca6ca 180 PANTHER PTHR11046 1 178 1.3E-108 T 22-04-2016 R615_RS02410 76d59688887edab2c7a6fa26defca6ca 180 PANTHER PTHR11046:SF1 1 178 1.3E-108 T 22-04-2016 R615_RS02410 76d59688887edab2c7a6fa26defca6ca 180 Gene3D G3DSA:3.30.420.10 3 177 4.8E-72 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS02410 76d59688887edab2c7a6fa26defca6ca 180 Pfam PF00929 Exonuclease 8 169 1.5E-35 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III R615_RS13550 aba5402ca370bc92b3457cb605b18675 404 SUPERFAMILY SSF89796 1 392 2.22E-116 T 22-04-2016 IPR023606 CoA-transferase family III domain R615_RS13550 aba5402ca370bc92b3457cb605b18675 404 PANTHER PTHR24023 24 379 7.7E-55 T 22-04-2016 R615_RS13550 aba5402ca370bc92b3457cb605b18675 404 Pfam PF02515 CoA-transferase family III 5 369 7.6E-100 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 R615_RS13550 aba5402ca370bc92b3457cb605b18675 404 Gene3D G3DSA:3.30.1540.10 233 301 1.3E-12 T 22-04-2016 R615_RS13550 aba5402ca370bc92b3457cb605b18675 404 Gene3D G3DSA:3.40.50.10540 2 216 2.0E-103 T 22-04-2016 IPR023606 CoA-transferase family III domain R615_RS13550 aba5402ca370bc92b3457cb605b18675 404 Gene3D G3DSA:3.40.50.10540 302 392 2.0E-103 T 22-04-2016 IPR023606 CoA-transferase family III domain R615_RS13550 aba5402ca370bc92b3457cb605b18675 404 PANTHER PTHR24023:SF577 24 379 7.7E-55 T 22-04-2016 R615_RS05710 bbe6476ba0e2aaef1759ff801f436bb8 371 PANTHER PTHR40697 1 371 3.6E-162 T 22-04-2016 R615_RS05710 bbe6476ba0e2aaef1759ff801f436bb8 371 Gene3D G3DSA:3.40.50.10330 86 146 4.1E-4 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 R615_RS05710 bbe6476ba0e2aaef1759ff801f436bb8 371 SUPERFAMILY SSF111331 73 140 6.1E-7 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain R615_RS05710 bbe6476ba0e2aaef1759ff801f436bb8 371 Pfam PF01513 ATP-NAD kinase 5 364 8.4E-42 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 R615_RS05710 bbe6476ba0e2aaef1759ff801f436bb8 371 PIRSF PIRSF016907 1 371 2.8E-125 T 22-04-2016 IPR011386 Putative ATP-NAD kinase R615_RS05710 bbe6476ba0e2aaef1759ff801f436bb8 371 PANTHER PTHR40697:SF1 1 371 3.6E-162 T 22-04-2016 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 Gene3D G3DSA:3.30.572.10 1 264 1.6E-133 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 Pfam PF00303 Thymidylate synthase 2 264 2.0E-123 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 PANTHER PTHR11548 1 264 6.5E-190 T 22-04-2016 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 6.3E-42 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 4.0E-94 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.9E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.9E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.9E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.9E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.9E-49 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 SUPERFAMILY SSF55831 1 264 1.01E-129 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 R615_RS16510 cc3c9f51f5d64a46ee4b5725c8196c29 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 45.699 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 R615_RS02135 8ae90e4e4d2c5e2048c62ab12312fd57 420 SUPERFAMILY SSF55205 1 419 1.44E-139 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 R615_RS02135 8ae90e4e4d2c5e2048c62ab12312fd57 420 Gene3D G3DSA:3.65.10.10 21 221 5.0E-65 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 R615_RS02135 8ae90e4e4d2c5e2048c62ab12312fd57 420 Gene3D G3DSA:3.65.10.10 222 419 3.1E-57 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 R615_RS02135 8ae90e4e4d2c5e2048c62ab12312fd57 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 2.8E-113 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 R615_RS02135 8ae90e4e4d2c5e2048c62ab12312fd57 420 PANTHER PTHR21090 1 419 5.3E-198 T 22-04-2016 R615_RS02135 8ae90e4e4d2c5e2048c62ab12312fd57 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 6.3E-176 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS02135 8ae90e4e4d2c5e2048c62ab12312fd57 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 46.573 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS15510 ebf360c9d00514c6c4ab5db46ef1af24 406 Gene3D G3DSA:3.90.1580.10 164 405 8.1E-54 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme R615_RS15510 ebf360c9d00514c6c4ab5db46ef1af24 406 Pfam PF03781 Sulfatase-modifying factor enzyme 1 323 405 3.7E-7 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme R615_RS15510 ebf360c9d00514c6c4ab5db46ef1af24 406 Pfam PF03781 Sulfatase-modifying factor enzyme 1 176 304 9.8E-22 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme R615_RS15510 ebf360c9d00514c6c4ab5db46ef1af24 406 PANTHER PTHR23150 6 405 6.8E-92 T 22-04-2016 R615_RS15510 ebf360c9d00514c6c4ab5db46ef1af24 406 Pfam PF12867 DinB superfamily 9 131 7.3E-7 T 22-04-2016 IPR024775 DinB-like domain R615_RS15510 ebf360c9d00514c6c4ab5db46ef1af24 406 SUPERFAMILY SSF56436 168 405 7.4E-63 T 22-04-2016 IPR016187 C-type lectin fold R615_RS15510 ebf360c9d00514c6c4ab5db46ef1af24 406 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 6 404 1.8E-158 T 22-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 R615_RS15510 ebf360c9d00514c6c4ab5db46ef1af24 406 PANTHER PTHR23150:SF24 6 405 6.8E-92 T 22-04-2016 R615_RS02730 8be8bbc20d33573d654f7d5316c94566 154 SUPERFAMILY SSF75217 1 153 7.85E-42 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases R615_RS02730 8be8bbc20d33573d654f7d5316c94566 154 PANTHER PTHR12029:SF31 1 153 3.0E-75 T 22-04-2016 R615_RS02730 8be8bbc20d33573d654f7d5316c94566 154 PANTHER PTHR12029 1 153 3.0E-75 T 22-04-2016 R615_RS02730 8be8bbc20d33573d654f7d5316c94566 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 2.4E-32 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 R615_RS02730 8be8bbc20d33573d654f7d5316c94566 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 152 6.6E-64 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 R615_RS02730 8be8bbc20d33573d654f7d5316c94566 154 PIRSF PIRSF029256 1 154 2.6E-66 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 R615_RS02730 8be8bbc20d33573d654f7d5316c94566 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 33.377 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 R615_RS02730 8be8bbc20d33573d654f7d5316c94566 154 Gene3D G3DSA:3.40.1280.10 1 153 3.3E-67 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal R615_RS07070 27e72f02f7adfd18de0cc01c4750c2fe 172 Pfam PF03734 L,D-transpeptidase catalytic domain 6 159 2.0E-17 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 R615_RS07070 27e72f02f7adfd18de0cc01c4750c2fe 172 SUPERFAMILY SSF141523 87 160 1.7E-23 T 22-04-2016 R615_RS07070 27e72f02f7adfd18de0cc01c4750c2fe 172 SUPERFAMILY SSF141523 4 59 1.7E-23 T 22-04-2016 R615_RS07070 27e72f02f7adfd18de0cc01c4750c2fe 172 Gene3D G3DSA:2.40.440.10 6 160 8.8E-27 T 22-04-2016 R615_RS07070 27e72f02f7adfd18de0cc01c4750c2fe 172 PANTHER PTHR30582 7 159 1.5E-16 T 22-04-2016 R615_RS04080 ffaca934f659e26f90239a1cb194d0e2 93 Pfam PF13616 PPIC-type PPIASE domain 16 90 2.3E-21 T 22-04-2016 R615_RS04080 ffaca934f659e26f90239a1cb194d0e2 93 Gene3D G3DSA:3.10.50.40 4 92 7.5E-33 T 22-04-2016 R615_RS04080 ffaca934f659e26f90239a1cb194d0e2 93 SUPERFAMILY SSF54534 4 88 9.81E-28 T 22-04-2016 R615_RS04080 ffaca934f659e26f90239a1cb194d0e2 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site R615_RS04080 ffaca934f659e26f90239a1cb194d0e2 93 PANTHER PTHR10657 7 88 1.6E-35 T 22-04-2016 R615_RS09680 8ef7ca7161d637d7c177c03c3c4e3e3b 288 SUPERFAMILY SSF53850 88 288 6.52E-45 T 22-04-2016 R615_RS09680 8ef7ca7161d637d7c177c03c3c4e3e3b 288 Pfam PF03466 LysR substrate binding domain 87 287 1.8E-45 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS09680 8ef7ca7161d637d7c177c03c3c4e3e3b 288 Gene3D G3DSA:3.40.190.10 90 177 5.7E-17 T 22-04-2016 R615_RS09680 8ef7ca7161d637d7c177c03c3c4e3e3b 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.4E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS09680 8ef7ca7161d637d7c177c03c3c4e3e3b 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.4E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS09680 8ef7ca7161d637d7c177c03c3c4e3e3b 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.4E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS09680 8ef7ca7161d637d7c177c03c3c4e3e3b 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.9E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS09680 8ef7ca7161d637d7c177c03c3c4e3e3b 288 PANTHER PTHR30126 1 287 4.7E-99 T 22-04-2016 R615_RS09680 8ef7ca7161d637d7c177c03c3c4e3e3b 288 PANTHER PTHR30126:SF33 1 287 4.7E-99 T 22-04-2016 R615_RS09680 8ef7ca7161d637d7c177c03c3c4e3e3b 288 SUPERFAMILY SSF46785 1 86 1.21E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS09680 8ef7ca7161d637d7c177c03c3c4e3e3b 288 Gene3D G3DSA:1.10.10.10 1 79 6.6E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS09680 8ef7ca7161d637d7c177c03c3c4e3e3b 288 Gene3D G3DSA:3.40.190.10 178 250 2.6E-21 T 22-04-2016 R615_RS14735 b43f47bcc45877ef4c8a1c0d6a45a172 231 PANTHER PTHR41164:SF1 1 229 4.5E-49 T 22-04-2016 R615_RS14735 b43f47bcc45877ef4c8a1c0d6a45a172 231 Pfam PF03783 Curli production assembly/transport component CsgG 51 228 1.6E-30 T 22-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 R615_RS14735 b43f47bcc45877ef4c8a1c0d6a45a172 231 SUPERFAMILY SSF52964 70 151 1.44E-6 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 R615_RS14735 b43f47bcc45877ef4c8a1c0d6a45a172 231 PANTHER PTHR41164 1 229 4.5E-49 T 22-04-2016 R615_RS14735 b43f47bcc45877ef4c8a1c0d6a45a172 231 Gene3D G3DSA:3.40.50.10070 70 138 6.0E-5 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 R615_RS12065 0b11361161690c589d6665bac5af9cdb 235 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 125 153 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS12065 0b11361161690c589d6665bac5af9cdb 235 PANTHER PTHR24322 7 169 1.8E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12065 0b11361161690c589d6665bac5af9cdb 235 PANTHER PTHR24322:SF57 7 169 1.8E-21 T 22-04-2016 R615_RS12065 0b11361161690c589d6665bac5af9cdb 235 Pfam PF00106 short chain dehydrogenase 3 171 2.7E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12065 0b11361161690c589d6665bac5af9cdb 235 Gene3D G3DSA:3.40.50.720 3 224 9.6E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS12065 0b11361161690c589d6665bac5af9cdb 235 SUPERFAMILY SSF51735 3 226 7.78E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS12065 0b11361161690c589d6665bac5af9cdb 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 175 2.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12065 0b11361161690c589d6665bac5af9cdb 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 157 2.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12065 0b11361161690c589d6665bac5af9cdb 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 2.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12065 0b11361161690c589d6665bac5af9cdb 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14315 893ae0df193d8ab0341059f184916aab 250 SUPERFAMILY SSF53639 12 215 3.73E-57 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal R615_RS14315 893ae0df193d8ab0341059f184916aab 250 Gene3D G3DSA:3.40.225.10 12 223 1.6E-58 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal R615_RS14315 893ae0df193d8ab0341059f184916aab 250 PANTHER PTHR10672 11 245 7.0E-96 T 22-04-2016 R615_RS14315 893ae0df193d8ab0341059f184916aab 250 SMART SM01007 17 197 9.5E-59 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal R615_RS14315 893ae0df193d8ab0341059f184916aab 250 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 19 197 8.2E-43 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal R615_RS11980 0b5ea0c79a1cbbc55409729993f85112 503 SUPERFAMILY SSF52172 3 141 6.69E-29 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS11980 0b5ea0c79a1cbbc55409729993f85112 503 Gene3D G3DSA:3.20.20.450 367 493 1.5E-9 T 22-04-2016 IPR001633 EAL domain R615_RS11980 0b5ea0c79a1cbbc55409729993f85112 503 Pfam PF00563 EAL domain 336 485 2.4E-13 T 22-04-2016 IPR001633 EAL domain R615_RS11980 0b5ea0c79a1cbbc55409729993f85112 503 SUPERFAMILY SSF141868 356 493 1.09E-9 T 22-04-2016 IPR001633 EAL domain R615_RS11980 0b5ea0c79a1cbbc55409729993f85112 503 SMART SM00448 3 115 1.1E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS11980 0b5ea0c79a1cbbc55409729993f85112 503 SUPERFAMILY SSF55785 117 222 1.68E-7 T 22-04-2016 IPR000014 PAS domain R615_RS11980 0b5ea0c79a1cbbc55409729993f85112 503 Gene3D G3DSA:3.30.450.20 137 223 2.6E-7 T 22-04-2016 R615_RS11980 0b5ea0c79a1cbbc55409729993f85112 503 PANTHER PTHR26402 3 107 1.7E-26 T 22-04-2016 R615_RS11980 0b5ea0c79a1cbbc55409729993f85112 503 Gene3D G3DSA:3.40.50.2300 3 133 1.4E-28 T 22-04-2016 R615_RS11980 0b5ea0c79a1cbbc55409729993f85112 503 Pfam PF00072 Response regulator receiver domain 5 114 6.2E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS10540 65c10e8746dcda53632f399690ff22ea 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 357 7.8E-37 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 R615_RS10540 65c10e8746dcda53632f399690ff22ea 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 278 4.0E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain R615_RS10540 65c10e8746dcda53632f399690ff22ea 379 PANTHER PTHR30469 7 359 1.7E-29 T 22-04-2016 R615_RS10540 65c10e8746dcda53632f399690ff22ea 379 SUPERFAMILY SSF111369 59 278 1.19E-16 T 22-04-2016 R615_RS10540 65c10e8746dcda53632f399690ff22ea 379 Gene3D G3DSA:2.40.50.100 177 213 9.5E-6 T 22-04-2016 R615_RS10540 65c10e8746dcda53632f399690ff22ea 379 Gene3D G3DSA:2.40.50.100 63 101 9.5E-6 T 22-04-2016 R615_RS05900 89fd621dbc25041e7f5eec5fa18b02d8 116 Gene3D G3DSA:3.40.30.10 1 116 4.1E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS05900 89fd621dbc25041e7f5eec5fa18b02d8 116 PANTHER PTHR30041:SF4 1 116 2.2E-57 T 22-04-2016 R615_RS05900 89fd621dbc25041e7f5eec5fa18b02d8 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 7.7E-47 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 R615_RS05900 89fd621dbc25041e7f5eec5fa18b02d8 116 PANTHER PTHR30041 1 116 2.2E-57 T 22-04-2016 R615_RS05900 89fd621dbc25041e7f5eec5fa18b02d8 116 SUPERFAMILY SSF52833 4 116 8.5E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS05900 89fd621dbc25041e7f5eec5fa18b02d8 116 Pfam PF03960 ArsC family 7 115 2.7E-20 T 22-04-2016 IPR006660 Arsenate reductase-like R615_RS08370 34d6e2e20cf9af0ac9db4a59c6df66e6 110 SMART SM00418 15 100 4.6E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS08370 34d6e2e20cf9af0ac9db4a59c6df66e6 110 SUPERFAMILY SSF46785 2 93 2.35E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS08370 34d6e2e20cf9af0ac9db4a59c6df66e6 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.6E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS08370 34d6e2e20cf9af0ac9db4a59c6df66e6 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.6E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS08370 34d6e2e20cf9af0ac9db4a59c6df66e6 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 1.6E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS08370 34d6e2e20cf9af0ac9db4a59c6df66e6 110 Pfam PF01022 Bacterial regulatory protein, arsR family 22 67 9.9E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS08370 34d6e2e20cf9af0ac9db4a59c6df66e6 110 PANTHER PTHR33154:SF9 1 105 2.5E-22 T 22-04-2016 R615_RS08370 34d6e2e20cf9af0ac9db4a59c6df66e6 110 Gene3D G3DSA:1.10.10.10 2 95 3.5E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS08370 34d6e2e20cf9af0ac9db4a59c6df66e6 110 PANTHER PTHR33154 1 105 2.5E-22 T 22-04-2016 R615_RS03145 ade15a2599bc778f6b8f9ca825500480 321 SUPERFAMILY SSF102114 48 312 7.85E-66 T 22-04-2016 R615_RS03145 ade15a2599bc778f6b8f9ca825500480 321 PIRSF PIRSF005963 5 317 5.1E-132 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 R615_RS03145 ade15a2599bc778f6b8f9ca825500480 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 29 315 8.3E-129 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 R615_RS03145 ade15a2599bc778f6b8f9ca825500480 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 34 70 1.5E-8 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 R615_RS03145 ade15a2599bc778f6b8f9ca825500480 321 Pfam PF04055 Radical SAM superfamily 88 247 1.5E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 R615_RS03145 ade15a2599bc778f6b8f9ca825500480 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 154.362 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 R615_RS03145 ade15a2599bc778f6b8f9ca825500480 321 Gene3D G3DSA:3.20.20.70 50 309 1.1E-67 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS03145 ade15a2599bc778f6b8f9ca825500480 321 SMART SM00729 81 287 6.8E-14 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 R615_RS03145 ade15a2599bc778f6b8f9ca825500480 321 PANTHER PTHR10949 12 311 1.2E-168 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 R615_RS00775 0976a6c4ee1659967b1e5ebb47f31a42 308 SUPERFAMILY SSF52172 2 129 5.98E-29 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS00775 0976a6c4ee1659967b1e5ebb47f31a42 308 PANTHER PTHR26402 4 123 3.8E-29 T 22-04-2016 R615_RS00775 0976a6c4ee1659967b1e5ebb47f31a42 308 Gene3D G3DSA:3.40.50.2300 3 126 4.3E-31 T 22-04-2016 R615_RS00775 0976a6c4ee1659967b1e5ebb47f31a42 308 SMART SM00448 4 119 3.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS00775 0976a6c4ee1659967b1e5ebb47f31a42 308 Pfam PF00072 Response regulator receiver domain 6 119 3.8E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS07615 1aed00373f671369f1d38fbf374f8c69 572 Gene3D G3DSA:3.40.47.10 334 485 1.4E-19 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS07615 1aed00373f671369f1d38fbf374f8c69 572 SMART SM00825 Beta-ketoacyl synthase 8 487 0.002 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain R615_RS07615 1aed00373f671369f1d38fbf374f8c69 572 SUPERFAMILY SSF53901 6 35 9.47E-28 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS07615 1aed00373f671369f1d38fbf374f8c69 572 SUPERFAMILY SSF53901 63 324 9.47E-28 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS07615 1aed00373f671369f1d38fbf374f8c69 572 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 119 315 2.2E-14 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal R615_RS07615 1aed00373f671369f1d38fbf374f8c69 572 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 325 440 1.8E-9 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal R615_RS07615 1aed00373f671369f1d38fbf374f8c69 572 PANTHER PTHR11712:SF272 121 272 3.0E-31 T 22-04-2016 R615_RS07615 1aed00373f671369f1d38fbf374f8c69 572 PANTHER PTHR11712:SF272 290 486 3.0E-31 T 22-04-2016 R615_RS07615 1aed00373f671369f1d38fbf374f8c69 572 SUPERFAMILY SSF53901 288 486 1.55E-28 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS07615 1aed00373f671369f1d38fbf374f8c69 572 PANTHER PTHR11712 121 272 3.0E-31 T 22-04-2016 R615_RS07615 1aed00373f671369f1d38fbf374f8c69 572 PANTHER PTHR11712 290 486 3.0E-31 T 22-04-2016 R615_RS07615 1aed00373f671369f1d38fbf374f8c69 572 Gene3D G3DSA:3.40.47.10 63 328 7.8E-25 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS14610 4aa751d1b285fa79e774b4c58e585520 454 PANTHER PTHR11963 98 451 1.6E-135 T 22-04-2016 R615_RS14610 4aa751d1b285fa79e774b4c58e585520 454 SUPERFAMILY SSF53187 138 451 7.22E-104 T 22-04-2016 R615_RS14610 4aa751d1b285fa79e774b4c58e585520 454 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 302 309 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 R615_RS14610 4aa751d1b285fa79e774b4c58e585520 454 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 144 443 1.6E-99 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 R615_RS14610 4aa751d1b285fa79e774b4c58e585520 454 PRINTS PR00481 Cytosol aminopeptidase signature 276 297 3.7E-42 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 R615_RS14610 4aa751d1b285fa79e774b4c58e585520 454 PRINTS PR00481 Cytosol aminopeptidase signature 217 234 3.7E-42 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 R615_RS14610 4aa751d1b285fa79e774b4c58e585520 454 PRINTS PR00481 Cytosol aminopeptidase signature 298 318 3.7E-42 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 R615_RS14610 4aa751d1b285fa79e774b4c58e585520 454 PRINTS PR00481 Cytosol aminopeptidase signature 239 260 3.7E-42 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 R615_RS14610 4aa751d1b285fa79e774b4c58e585520 454 PRINTS PR00481 Cytosol aminopeptidase signature 326 341 3.7E-42 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 R615_RS14610 4aa751d1b285fa79e774b4c58e585520 454 Gene3D G3DSA:3.40.630.10 130 451 3.3E-112 T 22-04-2016 R615_RS14610 4aa751d1b285fa79e774b4c58e585520 454 PANTHER PTHR11963:SF13 98 451 1.6E-135 T 22-04-2016 R615_RS10305 1293b5f46b855e727f1eaa7ad2b8194b 192 PANTHER PTHR30173 1 185 7.8E-35 T 22-04-2016 R615_RS10305 1293b5f46b855e727f1eaa7ad2b8194b 192 Pfam PF04542 Sigma-70 region 2 24 92 9.0E-14 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS10305 1293b5f46b855e727f1eaa7ad2b8194b 192 Gene3D G3DSA:1.10.10.10 124 185 3.1E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS10305 1293b5f46b855e727f1eaa7ad2b8194b 192 SUPERFAMILY SSF88659 116 183 6.17E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS10305 1293b5f46b855e727f1eaa7ad2b8194b 192 Gene3D G3DSA:1.10.1740.10 8 116 6.5E-21 T 22-04-2016 R615_RS10305 1293b5f46b855e727f1eaa7ad2b8194b 192 Pfam PF08281 Sigma-70, region 4 127 177 6.7E-9 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS10305 1293b5f46b855e727f1eaa7ad2b8194b 192 SUPERFAMILY SSF88946 6 105 2.08E-20 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS10305 1293b5f46b855e727f1eaa7ad2b8194b 192 PANTHER PTHR30173:SF31 1 185 7.8E-35 T 22-04-2016 R615_RS10305 1293b5f46b855e727f1eaa7ad2b8194b 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 182 7.3E-24 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS11185 7d939b18de198796098929587649c895 331 Gene3D G3DSA:3.40.50.1820 65 328 1.8E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS11185 7d939b18de198796098929587649c895 331 PANTHER PTHR23024 63 310 4.3E-47 T 22-04-2016 R615_RS11185 7d939b18de198796098929587649c895 331 PANTHER PTHR23024:SF202 63 310 4.3E-47 T 22-04-2016 R615_RS11185 7d939b18de198796098929587649c895 331 SUPERFAMILY SSF53474 61 328 4.39E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS11185 7d939b18de198796098929587649c895 331 Pfam PF07859 alpha/beta hydrolase fold 96 310 1.4E-19 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 R615_RS06610 55d4323d1f354ebcbaaee5ccee4d1dee 118 Pfam PF05717 IS66 Orf2 like protein 9 106 2.5E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 R615_RS06610 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455:SF1 2 112 1.1E-29 T 22-04-2016 R615_RS06610 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455 2 112 1.1E-29 T 22-04-2016 R615_RS03630 55d4323d1f354ebcbaaee5ccee4d1dee 118 Pfam PF05717 IS66 Orf2 like protein 9 106 2.5E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 R615_RS03630 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455:SF1 2 112 1.1E-29 T 22-04-2016 R615_RS03630 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455 2 112 1.1E-29 T 22-04-2016 R615_RS01735 55d4323d1f354ebcbaaee5ccee4d1dee 118 Pfam PF05717 IS66 Orf2 like protein 9 106 2.5E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 R615_RS01735 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455:SF1 2 112 1.1E-29 T 22-04-2016 R615_RS01735 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455 2 112 1.1E-29 T 22-04-2016 R615_RS06375 55d4323d1f354ebcbaaee5ccee4d1dee 118 Pfam PF05717 IS66 Orf2 like protein 9 106 2.5E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 R615_RS06375 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455:SF1 2 112 1.1E-29 T 22-04-2016 R615_RS06375 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455 2 112 1.1E-29 T 22-04-2016 R615_RS04775 55d4323d1f354ebcbaaee5ccee4d1dee 118 Pfam PF05717 IS66 Orf2 like protein 9 106 2.5E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 R615_RS04775 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455:SF1 2 112 1.1E-29 T 22-04-2016 R615_RS04775 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455 2 112 1.1E-29 T 22-04-2016 R615_RS05625 55d4323d1f354ebcbaaee5ccee4d1dee 118 Pfam PF05717 IS66 Orf2 like protein 9 106 2.5E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 R615_RS05625 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455:SF1 2 112 1.1E-29 T 22-04-2016 R615_RS05625 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455 2 112 1.1E-29 T 22-04-2016 R615_RS12805 55d4323d1f354ebcbaaee5ccee4d1dee 118 Pfam PF05717 IS66 Orf2 like protein 9 106 2.5E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 R615_RS12805 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455:SF1 2 112 1.1E-29 T 22-04-2016 R615_RS12805 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455 2 112 1.1E-29 T 22-04-2016 R615_RS10375 55d4323d1f354ebcbaaee5ccee4d1dee 118 Pfam PF05717 IS66 Orf2 like protein 9 106 2.5E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 R615_RS10375 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455:SF1 2 112 1.1E-29 T 22-04-2016 R615_RS10375 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455 2 112 1.1E-29 T 22-04-2016 R615_RS01970 55d4323d1f354ebcbaaee5ccee4d1dee 118 Pfam PF05717 IS66 Orf2 like protein 9 106 2.5E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 R615_RS01970 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455:SF1 2 112 1.1E-29 T 22-04-2016 R615_RS01970 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455 2 112 1.1E-29 T 22-04-2016 R615_RS04335 55d4323d1f354ebcbaaee5ccee4d1dee 118 Pfam PF05717 IS66 Orf2 like protein 9 106 2.5E-37 T 22-04-2016 IPR008878 Transposase IS66, Orf2 R615_RS04335 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455:SF1 2 112 1.1E-29 T 22-04-2016 R615_RS04335 55d4323d1f354ebcbaaee5ccee4d1dee 118 PANTHER PTHR36455 2 112 1.1E-29 T 22-04-2016 R615_RS03310 433774eb7031663060000702cd163505 320 PANTHER PTHR11079 9 320 4.2E-135 T 22-04-2016 R615_RS03310 433774eb7031663060000702cd163505 320 PANTHER PTHR11079:SF73 9 320 4.2E-135 T 22-04-2016 R615_RS03310 433774eb7031663060000702cd163505 320 Pfam PF01479 S4 domain 19 51 2.9E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS03310 433774eb7031663060000702cd163505 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 17 311 4.0E-98 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS03310 433774eb7031663060000702cd163505 320 SUPERFAMILY SSF55120 76 312 2.67E-77 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS03310 433774eb7031663060000702cd163505 320 Pfam PF00849 RNA pseudouridylate synthase 91 241 7.3E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS03310 433774eb7031663060000702cd163505 320 SUPERFAMILY SSF55174 18 67 2.19E-6 T 22-04-2016 R615_RS03310 433774eb7031663060000702cd163505 320 Gene3D G3DSA:3.10.290.10 19 52 6.3E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS03310 433774eb7031663060000702cd163505 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS08755 29ca3d6f605c1969d03aaebe4271d7ab 182 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 71 160 8.3E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS08755 29ca3d6f605c1969d03aaebe4271d7ab 182 SUPERFAMILY SSF46626 51 173 2.72E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS08755 29ca3d6f605c1969d03aaebe4271d7ab 182 Gene3D G3DSA:1.10.760.10 64 166 5.4E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 190 3.2E-4 T 22-04-2016 R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 SUPERFAMILY SSF51735 1 268 2.84E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 Pfam PF00106 short chain dehydrogenase 7 194 3.0E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 Gene3D G3DSA:3.40.50.720 6 237 5.6E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 PANTHER PTHR24322 11 138 1.0E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 PANTHER PTHR24322 154 186 1.0E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 PANTHER PTHR24322:SF365 11 138 1.0E-54 T 22-04-2016 R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 PANTHER PTHR24322:SF365 154 186 1.0E-54 T 22-04-2016 R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 6.3E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.3E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 6.3E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07700 db6a145202443d2d6fb50d07ea9deb0f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00185 5869e62fef0537aba8fe403502ab1ead 463 Gene3D G3DSA:3.30.70.20 222 274 3.9E-6 T 22-04-2016 R615_RS00185 5869e62fef0537aba8fe403502ab1ead 463 Gene3D G3DSA:2.60.40.10 351 461 4.3E-14 T 22-04-2016 IPR013783 Immunoglobulin-like fold R615_RS00185 5869e62fef0537aba8fe403502ab1ead 463 PANTHER PTHR24960 4 388 1.9E-102 T 22-04-2016 R615_RS00185 5869e62fef0537aba8fe403502ab1ead 463 Pfam PF13746 4Fe-4S dicluster domain 219 319 2.7E-37 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain R615_RS00185 5869e62fef0537aba8fe403502ab1ead 463 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 267 278 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site R615_RS00185 5869e62fef0537aba8fe403502ab1ead 463 SUPERFAMILY SSF54862 174 348 7.95E-29 T 22-04-2016 R615_RS00185 5869e62fef0537aba8fe403502ab1ead 463 SUPERFAMILY SSF54862 107 130 7.95E-29 T 22-04-2016 R615_RS00185 5869e62fef0537aba8fe403502ab1ead 463 Pfam PF12801 4Fe-4S binding domain 99 128 2.8E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain R615_RS00185 5869e62fef0537aba8fe403502ab1ead 463 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 434 3.6E-125 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 R615_RS00185 5869e62fef0537aba8fe403502ab1ead 463 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 351 461 1.6E-10 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain R615_RS00185 5869e62fef0537aba8fe403502ab1ead 463 Gene3D G3DSA:3.30.70.20 275 317 1.9E-6 T 22-04-2016 R615_RS00185 5869e62fef0537aba8fe403502ab1ead 463 PANTHER PTHR24960:SF45 4 388 1.9E-102 T 22-04-2016 R615_RS08405 2216043961e1adac55d266da01dd18d4 148 SUPERFAMILY SSF52821 52 134 3.67E-23 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS08405 2216043961e1adac55d266da01dd18d4 148 SMART SM00450 48 144 3.3E-17 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS08405 2216043961e1adac55d266da01dd18d4 148 Pfam PF00581 Rhodanese-like domain 62 135 2.5E-11 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS08405 2216043961e1adac55d266da01dd18d4 148 Gene3D G3DSA:3.40.250.10 61 137 6.6E-22 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS10065 ba567af837f11b4dcd27acfed7b2e3ac 80 PANTHER PTHR36582 1 80 3.1E-32 T 22-04-2016 R615_RS10065 ba567af837f11b4dcd27acfed7b2e3ac 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 71 1.3E-27 T 22-04-2016 IPR022789 Antitoxin ParD R615_RS10065 ba567af837f11b4dcd27acfed7b2e3ac 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 79 9.9E-32 T 22-04-2016 IPR022789 Antitoxin ParD R615_RS10065 ba567af837f11b4dcd27acfed7b2e3ac 80 SUPERFAMILY SSF47598 5 45 1.56E-7 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 R615_RS10065 ba567af837f11b4dcd27acfed7b2e3ac 80 PANTHER PTHR36582:SF2 1 80 3.1E-32 T 22-04-2016 R615_RS08065 0e309d8cf8c68f8ba2d75dbdd7cf82e9 75 Pfam PF03966 Trm112p-like protein 2 41 4.4E-10 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 R615_RS08065 0e309d8cf8c68f8ba2d75dbdd7cf82e9 75 SUPERFAMILY SSF158997 1 55 3.27E-19 T 22-04-2016 R615_RS08065 0e309d8cf8c68f8ba2d75dbdd7cf82e9 75 PANTHER PTHR33505 1 65 2.0E-24 T 22-04-2016 R615_RS08065 0e309d8cf8c68f8ba2d75dbdd7cf82e9 75 Gene3D G3DSA:2.20.25.10 8 60 1.5E-24 T 22-04-2016 R615_RS08065 0e309d8cf8c68f8ba2d75dbdd7cf82e9 75 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.435 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 R615_RS13310 60be5ce5bfea84746163115574ba506a 494 PANTHER PTHR13847 4 402 3.1E-185 T 22-04-2016 R615_RS13310 60be5ce5bfea84746163115574ba506a 494 Gene3D G3DSA:3.50.50.60 4 72 6.6E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS13310 60be5ce5bfea84746163115574ba506a 494 Gene3D G3DSA:3.50.50.60 147 328 6.6E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS13310 60be5ce5bfea84746163115574ba506a 494 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 2 491 51.115 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 R615_RS13310 60be5ce5bfea84746163115574ba506a 494 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 6 487 1.9E-207 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 R615_RS13310 60be5ce5bfea84746163115574ba506a 494 PANTHER PTHR13847:SF214 4 402 3.1E-185 T 22-04-2016 R615_RS13310 60be5ce5bfea84746163115574ba506a 494 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 5 491 6.8E-236 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 R615_RS13310 60be5ce5bfea84746163115574ba506a 494 SUPERFAMILY SSF51905 1 273 9.32E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS17005 b3cc96602637fc980e299c2bb98396e3 216 Pfam PF02527 rRNA small subunit methyltransferase G 29 208 4.8E-61 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 R615_RS17005 b3cc96602637fc980e299c2bb98396e3 216 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 208 3.2E-58 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 R615_RS17005 b3cc96602637fc980e299c2bb98396e3 216 Gene3D G3DSA:3.40.50.150 12 210 1.2E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS17005 b3cc96602637fc980e299c2bb98396e3 216 PANTHER PTHR31760 14 211 7.5E-71 T 22-04-2016 R615_RS17005 b3cc96602637fc980e299c2bb98396e3 216 PANTHER PTHR31760:SF0 14 211 7.5E-71 T 22-04-2016 R615_RS17005 b3cc96602637fc980e299c2bb98396e3 216 SUPERFAMILY SSF53335 13 212 2.24E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS17005 b3cc96602637fc980e299c2bb98396e3 216 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 209 27.927 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 R615_RS17005 b3cc96602637fc980e299c2bb98396e3 216 PIRSF PIRSF003078 4 212 8.9E-58 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 R615_RS02525 24d3b7b718a668ec68452824c149b8f3 207 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 14 203 7.4E-65 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 R615_RS02525 24d3b7b718a668ec68452824c149b8f3 207 SMART SM01007 12 199 1.6E-50 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal R615_RS02525 24d3b7b718a668ec68452824c149b8f3 207 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 207 95.935 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 R615_RS02525 24d3b7b718a668ec68452824c149b8f3 207 PANTHER PTHR10640 18 204 2.2E-47 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 R615_RS02525 24d3b7b718a668ec68452824c149b8f3 207 SUPERFAMILY SSF53639 10 204 1.12E-44 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal R615_RS02525 24d3b7b718a668ec68452824c149b8f3 207 Gene3D G3DSA:3.40.225.10 11 204 1.5E-46 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal R615_RS02525 24d3b7b718a668ec68452824c149b8f3 207 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 13 198 4.4E-41 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal R615_RS14655 f35e79a7e2c8feeb6c883d3241b50d0b 220 PANTHER PTHR18901:SF23 1 209 1.6E-35 T 22-04-2016 R615_RS14655 f35e79a7e2c8feeb6c883d3241b50d0b 220 PANTHER PTHR18901 1 209 1.6E-35 T 22-04-2016 R615_RS14655 f35e79a7e2c8feeb6c883d3241b50d0b 220 SUPERFAMILY SSF56784 2 207 6.54E-47 T 22-04-2016 IPR023214 HAD-like domain R615_RS14655 f35e79a7e2c8feeb6c883d3241b50d0b 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 2.1E-29 T 22-04-2016 IPR023214 HAD-like domain R615_RS14655 f35e79a7e2c8feeb6c883d3241b50d0b 220 Gene3D G3DSA:3.40.50.1000 78 208 7.6E-30 T 22-04-2016 IPR023214 HAD-like domain R615_RS14655 f35e79a7e2c8feeb6c883d3241b50d0b 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 5.8E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS14655 f35e79a7e2c8feeb6c883d3241b50d0b 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 5.8E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS14655 f35e79a7e2c8feeb6c883d3241b50d0b 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 5.8E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS14655 f35e79a7e2c8feeb6c883d3241b50d0b 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 106 177 1.8E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 R615_RS14655 f35e79a7e2c8feeb6c883d3241b50d0b 220 Gene3D G3DSA:1.10.150.240 20 77 5.7E-11 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 R615_RS03190 48984367c43a94eb460febaf45c81503 400 Pfam PF01018 GTP1/OBG 3 158 9.8E-61 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 R615_RS03190 48984367c43a94eb460febaf45c81503 400 Gene3D G3DSA:2.70.210.12 2 156 2.5E-58 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 R615_RS03190 48984367c43a94eb460febaf45c81503 400 Gene3D G3DSA:3.40.50.300 160 345 3.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03190 48984367c43a94eb460febaf45c81503 400 PANTHER PTHR11702:SF3 1 392 1.1E-171 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 R615_RS03190 48984367c43a94eb460febaf45c81503 400 PANTHER PTHR11702 1 392 1.1E-171 T 22-04-2016 R615_RS03190 48984367c43a94eb460febaf45c81503 400 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.3E-141 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 R615_RS03190 48984367c43a94eb460febaf45c81503 400 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.575 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 R615_RS03190 48984367c43a94eb460febaf45c81503 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.2E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS03190 48984367c43a94eb460febaf45c81503 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.2E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS03190 48984367c43a94eb460febaf45c81503 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.2E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS03190 48984367c43a94eb460febaf45c81503 400 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.2E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS03190 48984367c43a94eb460febaf45c81503 400 SUPERFAMILY SSF82051 2 158 1.7E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 R615_RS03190 48984367c43a94eb460febaf45c81503 400 PIRSF PIRSF002401 1 382 3.1E-135 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 R615_RS03190 48984367c43a94eb460febaf45c81503 400 SUPERFAMILY SSF52540 152 341 2.49E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03190 48984367c43a94eb460febaf45c81503 400 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 R615_RS03190 48984367c43a94eb460febaf45c81503 400 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.0E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS03855 ca02be2d58b535cb8ede3dad0cb87a25 203 SUPERFAMILY SSF46689 8 90 9.48E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS03855 ca02be2d58b535cb8ede3dad0cb87a25 203 Gene3D G3DSA:1.10.357.10 7 195 2.7E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS03855 ca02be2d58b535cb8ede3dad0cb87a25 203 PANTHER PTHR30055 1 201 4.0E-23 T 22-04-2016 R615_RS03855 ca02be2d58b535cb8ede3dad0cb87a25 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.1E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS03855 ca02be2d58b535cb8ede3dad0cb87a25 203 SUPERFAMILY SSF48498 87 197 9.34E-7 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal R615_RS03855 ca02be2d58b535cb8ede3dad0cb87a25 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.3E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS03855 ca02be2d58b535cb8ede3dad0cb87a25 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.3E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS05165 392673e9d189499339b6e88b62c45bcc 124 SUPERFAMILY SSF161084 3 121 8.11E-25 T 22-04-2016 R615_RS05165 392673e9d189499339b6e88b62c45bcc 124 Pfam PF01124 MAPEG family 4 122 2.7E-24 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein R615_RS05165 392673e9d189499339b6e88b62c45bcc 124 Gene3D G3DSA:1.20.120.550 4 121 1.1E-17 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain R615_RS05165 392673e9d189499339b6e88b62c45bcc 124 PANTHER PTHR35371 1 123 7.6E-27 T 22-04-2016 R615_RS05165 392673e9d189499339b6e88b62c45bcc 124 PANTHER PTHR35371:SF1 1 123 7.6E-27 T 22-04-2016 R615_RS06975 b9c343e812cf648a8804b80a312741fd 337 PANTHER PTHR11019:SF52 109 337 3.1E-42 T 22-04-2016 R615_RS06975 b9c343e812cf648a8804b80a312741fd 337 PANTHER PTHR11019 109 337 3.1E-42 T 22-04-2016 R615_RS06975 b9c343e812cf648a8804b80a312741fd 337 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 202 2.9E-38 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS06975 b9c343e812cf648a8804b80a312741fd 337 Pfam PF12833 Helix-turn-helix domain 254 330 6.6E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS06975 b9c343e812cf648a8804b80a312741fd 337 Gene3D G3DSA:1.10.10.60 283 333 3.3E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS06975 b9c343e812cf648a8804b80a312741fd 337 SUPERFAMILY SSF46689 283 332 2.33E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS06975 b9c343e812cf648a8804b80a312741fd 337 SMART SM00342 246 329 2.6E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS06975 b9c343e812cf648a8804b80a312741fd 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 313 1.4E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS06975 b9c343e812cf648a8804b80a312741fd 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 313 329 1.4E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 PANTHER PTHR33516 1 198 2.2E-94 T 22-04-2016 R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 SUPERFAMILY SSF46785 3 70 3.84E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 Pfam PF00717 Peptidase S24-like 114 180 1.4E-14 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 PANTHER PTHR33516:SF2 1 198 2.2E-94 T 22-04-2016 R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 Gene3D G3DSA:1.10.10.10 1 69 2.1E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 Hamap MF_00015 LexA repressor [lexA]. 3 199 33.001 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 Pfam PF01726 LexA DNA binding domain 1 65 1.3E-30 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 SUPERFAMILY SSF51306 75 197 2.35E-35 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 TIGRFAM TIGR00498 lexA: repressor LexA 1 198 4.7E-75 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 Gene3D G3DSA:2.10.109.10 76 198 2.4E-44 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 3.4E-9 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 3.4E-9 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 R615_RS07060 b103ff9b6e546bece7c7426e140ff774 199 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 3.4E-9 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 R615_RS01675 083edfb2f5a81268ef4c97342b6cea63 225 PIRSF PIRSF029287 1 225 1.5E-47 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 R615_RS01675 083edfb2f5a81268ef4c97342b6cea63 225 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 6 137 2.0E-45 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 R615_RS01675 083edfb2f5a81268ef4c97342b6cea63 225 Gene3D G3DSA:3.40.1730.10 3 225 5.3E-56 T 22-04-2016 R615_RS01675 083edfb2f5a81268ef4c97342b6cea63 225 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 6 138 7.4E-42 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 R615_RS16710 237ab0294b9c9abaeebaf902e3213247 525 SUPERFAMILY SSF55931 11 519 4.64E-185 T 22-04-2016 R615_RS16710 237ab0294b9c9abaeebaf902e3213247 525 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 525 192.041 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 R615_RS16710 237ab0294b9c9abaeebaf902e3213247 525 Pfam PF04262 Glutamate-cysteine ligase 14 383 2.8E-165 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 R615_RS16710 237ab0294b9c9abaeebaf902e3213247 525 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 18 520 6.9E-189 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 R615_RS16710 237ab0294b9c9abaeebaf902e3213247 525 PANTHER PTHR38761 6 522 3.1E-209 T 22-04-2016 R615_RS01525 cf30298daa44f5677f9938c091696339 327 Pfam PF00487 Fatty acid desaturase 38 275 3.8E-36 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 R615_RS09270 c14d9ff49dcc7fe840a0540057704deb 290 PANTHER PTHR42194 7 275 1.2E-114 T 22-04-2016 R615_RS09270 c14d9ff49dcc7fe840a0540057704deb 290 SUPERFAMILY SSF51658 19 265 4.35E-13 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain R615_RS09270 c14d9ff49dcc7fe840a0540057704deb 290 PANTHER PTHR42194:SF1 7 275 1.2E-114 T 22-04-2016 R615_RS09270 c14d9ff49dcc7fe840a0540057704deb 290 Pfam PF05114 Protein of unknown function (DUF692) 12 273 5.0E-100 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 R615_RS09270 c14d9ff49dcc7fe840a0540057704deb 290 Gene3D G3DSA:3.20.20.150 10 279 2.8E-96 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain R615_RS09270 c14d9ff49dcc7fe840a0540057704deb 290 Hamap MF_00697 UPF0276 protein . 13 281 43.918 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 R615_RS11190 e21079db84aa527735b7c501f9a2638d 392 ProSitePatterns PS01219 Ammonium transporters signature. 152 177 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 R615_RS11190 e21079db84aa527735b7c501f9a2638d 392 PANTHER PTHR11730:SF6 1 386 6.3E-119 T 22-04-2016 R615_RS11190 e21079db84aa527735b7c501f9a2638d 392 PANTHER PTHR11730 1 386 6.3E-119 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 R615_RS11190 e21079db84aa527735b7c501f9a2638d 392 Pfam PF00909 Ammonium Transporter Family 8 385 4.3E-86 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 R615_RS11190 e21079db84aa527735b7c501f9a2638d 392 SUPERFAMILY SSF111352 2 370 1.57E-92 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 R615_RS11190 e21079db84aa527735b7c501f9a2638d 392 Gene3D G3DSA:1.10.3430.10 2 370 9.0E-90 T 22-04-2016 IPR029020 Ammonium/urea transporter R615_RS10150 7186edb9a35751af4fcbb4e4c6f3ac55 378 SMART SM01002 148 313 3.1E-76 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain R615_RS10150 7186edb9a35751af4fcbb4e4c6f3ac55 378 PANTHER PTHR10160:SF19 1 366 1.3E-159 T 22-04-2016 R615_RS10150 7186edb9a35751af4fcbb4e4c6f3ac55 378 Gene3D G3DSA:3.50.50.60 176 198 1.5E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS10150 7186edb9a35751af4fcbb4e4c6f3ac55 378 SUPERFAMILY SSF52283 1 170 1.11E-52 T 22-04-2016 R615_RS10150 7186edb9a35751af4fcbb4e4c6f3ac55 378 Gene3D G3DSA:3.40.50.1770 1 175 8.2E-60 T 22-04-2016 R615_RS10150 7186edb9a35751af4fcbb4e4c6f3ac55 378 SUPERFAMILY SSF51735 140 316 8.1E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS10150 7186edb9a35751af4fcbb4e4c6f3ac55 378 Gene3D G3DSA:3.40.50.1770 199 369 2.8E-32 T 22-04-2016 R615_RS10150 7186edb9a35751af4fcbb4e4c6f3ac55 378 SMART SM01003 4 139 1.7E-63 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal R615_RS10150 7186edb9a35751af4fcbb4e4c6f3ac55 378 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 R615_RS10150 7186edb9a35751af4fcbb4e4c6f3ac55 378 PANTHER PTHR10160 1 366 1.3E-159 T 22-04-2016 R615_RS10150 7186edb9a35751af4fcbb4e4c6f3ac55 378 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 138 1.8E-44 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal R615_RS10150 7186edb9a35751af4fcbb4e4c6f3ac55 378 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 368 2.4E-70 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 Gene3D G3DSA:3.40.50.300 25 252 8.4E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 242 312 1.3E-13 T 22-04-2016 IPR019489 Clp ATPase, C-terminal R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 SMART SM01086 242 331 1.6E-8 T 22-04-2016 IPR019489 Clp ATPase, C-terminal R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 Gene3D G3DSA:1.10.8.60 253 331 2.1E-14 T 22-04-2016 R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 PANTHER PTHR11638:SF18 28 352 1.2E-70 T 22-04-2016 R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 PANTHER PTHR11638 28 352 1.2E-70 T 22-04-2016 R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 SUPERFAMILY SSF52540 23 310 3.17E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 Pfam PF07724 AAA domain (Cdc48 subfamily) 64 234 1.6E-34 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 180 194 3.2E-24 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 146 164 3.2E-24 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 113 131 3.2E-24 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 68 86 3.2E-24 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS04130 652bae9dbf6f5260870bd0545c9f95ad 357 SMART SM00382 64 231 7.5E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS06820 9d7d0fbdec2a87c2f8e6fad820a0a3d0 187 SUPERFAMILY SSF103088 73 183 1.57E-33 T 22-04-2016 IPR006665 OmpA-like domain R615_RS06820 9d7d0fbdec2a87c2f8e6fad820a0a3d0 187 PANTHER PTHR30128 35 187 3.7E-48 T 22-04-2016 R615_RS06820 9d7d0fbdec2a87c2f8e6fad820a0a3d0 187 Pfam PF00691 OmpA family 83 178 1.5E-19 T 22-04-2016 IPR006665 OmpA-like domain R615_RS06820 9d7d0fbdec2a87c2f8e6fad820a0a3d0 187 PRINTS PR01021 OMPA domain signature 114 129 2.8E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 R615_RS06820 9d7d0fbdec2a87c2f8e6fad820a0a3d0 187 PRINTS PR01021 OMPA domain signature 129 145 2.8E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 R615_RS06820 9d7d0fbdec2a87c2f8e6fad820a0a3d0 187 PRINTS PR01021 OMPA domain signature 84 106 2.8E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 R615_RS06820 9d7d0fbdec2a87c2f8e6fad820a0a3d0 187 Gene3D G3DSA:3.30.1330.60 80 184 1.0E-33 T 22-04-2016 IPR006665 OmpA-like domain R615_RS06820 9d7d0fbdec2a87c2f8e6fad820a0a3d0 187 PANTHER PTHR30128:SF18 35 187 3.7E-48 T 22-04-2016 R615_RS06820 9d7d0fbdec2a87c2f8e6fad820a0a3d0 187 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 82 184 1.7E-42 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 R615_RS09670 99fabe1d40a44e4c3e4cd070f12e9e5c 214 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 2 196 1.2E-82 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09670 99fabe1d40a44e4c3e4cd070f12e9e5c 214 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.558 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09670 99fabe1d40a44e4c3e4cd070f12e9e5c 214 SUPERFAMILY SSF52016 3 205 1.86E-60 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel R615_RS09670 99fabe1d40a44e4c3e4cd070f12e9e5c 214 Gene3D G3DSA:3.20.19.10 3 203 3.4E-51 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel R615_RS09670 99fabe1d40a44e4c3e4cd070f12e9e5c 214 PANTHER PTHR11670 2 208 6.8E-103 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09670 99fabe1d40a44e4c3e4cd070f12e9e5c 214 Pfam PF00694 Aconitase C-terminal domain 3 132 4.4E-35 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09670 99fabe1d40a44e4c3e4cd070f12e9e5c 214 PANTHER PTHR11670:SF27 2 208 6.8E-103 T 22-04-2016 R615_RS06115 a4394e9c29b0aaf12f8616fabf4c2e01 99 PANTHER PTHR33175 1 92 5.8E-45 T 22-04-2016 R615_RS06115 a4394e9c29b0aaf12f8616fabf4c2e01 99 Gene3D G3DSA:4.10.520.10 1 92 5.0E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 R615_RS06115 a4394e9c29b0aaf12f8616fabf4c2e01 99 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.4E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS06115 a4394e9c29b0aaf12f8616fabf4c2e01 99 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.4E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS06115 a4394e9c29b0aaf12f8616fabf4c2e01 99 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.4E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS06115 a4394e9c29b0aaf12f8616fabf4c2e01 99 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 2 92 2.4E-46 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 R615_RS06115 a4394e9c29b0aaf12f8616fabf4c2e01 99 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.2E-28 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS06115 a4394e9c29b0aaf12f8616fabf4c2e01 99 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.925 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 R615_RS06115 a4394e9c29b0aaf12f8616fabf4c2e01 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 R615_RS06115 a4394e9c29b0aaf12f8616fabf4c2e01 99 SMART SM00411 1 91 5.1E-40 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS06115 a4394e9c29b0aaf12f8616fabf4c2e01 99 SUPERFAMILY SSF47729 1 91 1.41E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 R615_RS06115 a4394e9c29b0aaf12f8616fabf4c2e01 99 PANTHER PTHR33175:SF5 1 92 5.8E-45 T 22-04-2016 R615_RS13615 85c0a3eb67cd8d059a18be4a5b5956b3 361 Gene3D G3DSA:3.40.50.10210 79 334 6.7E-99 T 22-04-2016 R615_RS13615 85c0a3eb67cd8d059a18be4a5b5956b3 361 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 23 351 9.0E-127 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 R615_RS13615 85c0a3eb67cd8d059a18be4a5b5956b3 361 PANTHER PTHR21712 19 352 6.3E-103 T 22-04-2016 R615_RS13615 85c0a3eb67cd8d059a18be4a5b5956b3 361 PANTHER PTHR21712:SF4 19 352 6.3E-103 T 22-04-2016 R615_RS13615 85c0a3eb67cd8d059a18be4a5b5956b3 361 SUPERFAMILY SSF52733 10 352 1.7E-110 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 R615_RS13615 85c0a3eb67cd8d059a18be4a5b5956b3 361 Pfam PF02277 Phosphoribosyltransferase 20 351 3.8E-122 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 R615_RS13615 85c0a3eb67cd8d059a18be4a5b5956b3 361 Gene3D G3DSA:1.10.1610.10 11 78 1.6E-27 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 R615_RS13615 85c0a3eb67cd8d059a18be4a5b5956b3 361 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 18 353 34.973 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 R615_RS16725 c2cda694ed0348c542c8b247c08810fd 157 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 148 3.8E-55 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 R615_RS16725 c2cda694ed0348c542c8b247c08810fd 157 PIRSF PIRSF016548 1 157 2.0E-52 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 SUPERFAMILY SSF50249 6 170 1.22E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 Pfam PF00270 DEAD/DEAH box helicase 293 433 2.3E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 SUPERFAMILY SSF52540 292 342 3.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 SUPERFAMILY SSF52540 507 651 3.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 Gene3D G3DSA:2.40.50.140 43 137 1.0E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 PANTHER PTHR24031 299 602 1.1E-126 T 22-04-2016 R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 PANTHER PTHR24031 625 687 1.1E-126 T 22-04-2016 R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 PANTHER PTHR24031 127 175 1.1E-126 T 22-04-2016 R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 PANTHER PTHR24031 213 282 1.1E-126 T 22-04-2016 R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 SMART SM00490 504 588 1.2E-22 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 SUPERFAMILY SSF52540 179 453 1.34E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 SMART SM00487 265 459 8.4E-31 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 PANTHER PTHR24031:SF249 299 602 1.1E-126 T 22-04-2016 R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 PANTHER PTHR24031:SF249 625 687 1.1E-126 T 22-04-2016 R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 PANTHER PTHR24031:SF249 127 175 1.1E-126 T 22-04-2016 R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 PANTHER PTHR24031:SF249 213 282 1.1E-126 T 22-04-2016 R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 Gene3D G3DSA:3.40.50.300 454 637 1.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 Gene3D G3DSA:1.10.150.20 6 32 9.0E-5 T 22-04-2016 R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 Pfam PF00271 Helicase conserved C-terminal domain 480 587 2.1E-18 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 Pfam PF17191 RecG wedge domain 10 163 8.1E-16 T 22-04-2016 IPR033454 RecG, wedge domain R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 25 663 4.0E-228 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 R615_RS00835 c8e8e1b00590a0032c4970115640b109 692 Gene3D G3DSA:3.40.50.300 256 453 2.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 Gene3D G3DSA:2.40.37.10 257 386 1.1E-29 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 PANTHER PTHR11482 12 387 1.9E-122 T 22-04-2016 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 74 86 8.6E-18 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 261 280 8.6E-18 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 177 190 8.6E-18 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 54 72 8.6E-18 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 Gene3D G3DSA:3.20.20.10 37 256 5.8E-63 T 22-04-2016 IPR029066 PLP-binding barrel R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 54 72 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 PRINTS PR01182 Ornithine decarboxylase signature 96 120 1.6E-17 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 PRINTS PR01182 Ornithine decarboxylase signature 126 148 1.6E-17 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 PRINTS PR01182 Ornithine decarboxylase signature 329 339 1.6E-17 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 PRINTS PR01182 Ornithine decarboxylase signature 52 79 1.6E-17 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 276 384 5.3E-18 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 SUPERFAMILY SSF51419 25 273 8.04E-63 T 22-04-2016 IPR029066 PLP-binding barrel R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 SUPERFAMILY SSF50621 246 387 3.98E-33 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 41 272 2.0E-52 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 R615_RS12695 2afa4b613dc8e3bae869c399d0c118ea 387 PANTHER PTHR11482:SF6 12 387 1.9E-122 T 22-04-2016 R615_RS04030 eb310cb98be59145f7ec8a1934443370 224 SUPERFAMILY SSF51366 4 218 2.17E-75 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 R615_RS04030 eb310cb98be59145f7ec8a1934443370 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 5.3E-91 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 R615_RS04030 eb310cb98be59145f7ec8a1934443370 224 Gene3D G3DSA:3.20.20.70 1 220 8.6E-95 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS04030 eb310cb98be59145f7ec8a1934443370 224 PIRSF PIRSF001461 1 224 1.5E-104 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 R615_RS04030 eb310cb98be59145f7ec8a1934443370 224 PANTHER PTHR11749 2 223 1.9E-149 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 R615_RS04030 eb310cb98be59145f7ec8a1934443370 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 3.0E-97 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 R615_RS04030 eb310cb98be59145f7ec8a1934443370 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 R615_RS04030 eb310cb98be59145f7ec8a1934443370 224 PANTHER PTHR11749:SF7 2 223 1.9E-149 T 22-04-2016 R615_RS04030 eb310cb98be59145f7ec8a1934443370 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 R615_RS09040 120c451fed3cf255be0f827fe0572079 811 Pfam PF07631 Protein of unknown function (DUF1592) 474 600 2.1E-41 T 22-04-2016 IPR013042 Domain of unknown function DUF1592 R615_RS09040 120c451fed3cf255be0f827fe0572079 811 Pfam PF07626 Protein of unknown function (DUF1587) 140 203 5.3E-25 T 22-04-2016 IPR013036 Domain of unknown function DUF1587 R615_RS09040 120c451fed3cf255be0f827fe0572079 811 Pfam PF07624 Protein of unknown function (DUF1585) 730 803 7.1E-26 T 22-04-2016 IPR011478 Domain of unknown function DUF1585 R615_RS09040 120c451fed3cf255be0f827fe0572079 811 Pfam PF07627 Protein of unknown function (DUF1588) 619 716 6.9E-33 T 22-04-2016 IPR013039 Domain of unknown function DUF1588 R615_RS09040 120c451fed3cf255be0f827fe0572079 811 Pfam PF07637 Protein of unknown function (DUF1595) 399 459 1.2E-18 T 22-04-2016 IPR013043 Domain of unknown function DUF1595 R615_RS08045 bad36d16bb0262d62c18d8869deb1d27 214 PANTHER PTHR30625:SF0 1 214 2.0E-63 T 22-04-2016 R615_RS08045 bad36d16bb0262d62c18d8869deb1d27 214 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 187 7.9E-36 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 R615_RS08045 bad36d16bb0262d62c18d8869deb1d27 214 PANTHER PTHR30625 1 214 2.0E-63 T 22-04-2016 R615_RS11250 852da3a9cea06d28e02985cfe7998959 561 PANTHER PTHR40940 5 556 8.8E-60 T 22-04-2016 R615_RS11250 852da3a9cea06d28e02985cfe7998959 561 PANTHER PTHR40940:SF1 5 556 8.8E-60 T 22-04-2016 R615_RS11250 852da3a9cea06d28e02985cfe7998959 561 Pfam PF13584 Oxygen tolerance 22 454 5.9E-101 T 22-04-2016 IPR025738 Aerotolerance-related protein BatD R615_RS11950 2f2755272738e28512987b44c32337b8 264 SUPERFAMILY SSF81901 54 118 2.35E-6 T 22-04-2016 R615_RS11950 2f2755272738e28512987b44c32337b8 264 SUPERFAMILY SSF81901 202 242 2.35E-6 T 22-04-2016 R615_RS11950 2f2755272738e28512987b44c32337b8 264 Pfam PF13174 Tetratricopeptide repeat 90 125 9.4E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS11950 2f2755272738e28512987b44c32337b8 264 Gene3D G3DSA:1.25.40.10 202 240 2.1E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS11950 2f2755272738e28512987b44c32337b8 264 Gene3D G3DSA:1.25.40.10 65 118 2.1E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS16915 9ce469d4967d60b39baab5be2474a830 317 PANTHER PTHR30024 3 277 7.9E-30 T 22-04-2016 R615_RS16915 9ce469d4967d60b39baab5be2474a830 317 Pfam PF13379 NMT1-like family 22 236 7.8E-15 T 22-04-2016 R615_RS16915 9ce469d4967d60b39baab5be2474a830 317 SUPERFAMILY SSF53850 25 240 3.76E-30 T 22-04-2016 R615_RS16915 9ce469d4967d60b39baab5be2474a830 317 Gene3D G3DSA:3.40.190.10 108 191 9.9E-13 T 22-04-2016 R615_RS16915 9ce469d4967d60b39baab5be2474a830 317 PANTHER PTHR30024:SF8 3 277 7.9E-30 T 22-04-2016 R615_RS07300 4df577dad60c3b5bb8200d8036af714d 112 Gene3D G3DSA:1.10.10.10 5 84 5.3E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS07300 4df577dad60c3b5bb8200d8036af714d 112 PANTHER PTHR33154 6 96 3.6E-26 T 22-04-2016 R615_RS07300 4df577dad60c3b5bb8200d8036af714d 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.5E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS07300 4df577dad60c3b5bb8200d8036af714d 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.5E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS07300 4df577dad60c3b5bb8200d8036af714d 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.5E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS07300 4df577dad60c3b5bb8200d8036af714d 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 1.5E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS07300 4df577dad60c3b5bb8200d8036af714d 112 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 9.0E-16 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS07300 4df577dad60c3b5bb8200d8036af714d 112 SMART SM00418 5 87 5.5E-27 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS07300 4df577dad60c3b5bb8200d8036af714d 112 SUPERFAMILY SSF46785 2 97 8.09E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS07300 4df577dad60c3b5bb8200d8036af714d 112 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 22-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 R615_RS03700 cca856d7f8b93ad710aee960a7829892 425 Gene3D G3DSA:1.10.1040.10 333 412 9.7E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS03700 cca856d7f8b93ad710aee960a7829892 425 Gene3D G3DSA:3.40.50.720 7 194 7.9E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS03700 cca856d7f8b93ad710aee960a7829892 425 SUPERFAMILY SSF48179 320 412 1.36E-22 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS03700 cca856d7f8b93ad710aee960a7829892 425 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 190 214 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 R615_RS03700 cca856d7f8b93ad710aee960a7829892 425 PANTHER PTHR23309:SF9 3 410 1.6E-179 T 22-04-2016 R615_RS03700 cca856d7f8b93ad710aee960a7829892 425 SUPERFAMILY SSF48179 193 299 1.53E-20 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS03700 cca856d7f8b93ad710aee960a7829892 425 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 12 190 2.3E-61 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 R615_RS03700 cca856d7f8b93ad710aee960a7829892 425 SUPERFAMILY SSF51735 10 191 5.41E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS03700 cca856d7f8b93ad710aee960a7829892 425 PANTHER PTHR23309 3 410 1.6E-179 T 22-04-2016 R615_RS03700 cca856d7f8b93ad710aee960a7829892 425 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 325 410 3.8E-9 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 R615_RS03700 cca856d7f8b93ad710aee960a7829892 425 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 193 289 1.9E-22 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 R615_RS03700 cca856d7f8b93ad710aee960a7829892 425 Gene3D G3DSA:1.10.1040.10 195 290 1.1E-16 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS07320 e0ec909702c4fc464f688f5e83db4ef9 249 Pfam PF04654 Protein of unknown function, DUF599 14 223 3.7E-54 T 22-04-2016 IPR006747 Protein of unknown function DUF599 R615_RS07320 e0ec909702c4fc464f688f5e83db4ef9 249 PANTHER PTHR31881:SF3 4 237 2.3E-73 T 22-04-2016 R615_RS07320 e0ec909702c4fc464f688f5e83db4ef9 249 PANTHER PTHR31881 4 237 2.3E-73 T 22-04-2016 R615_RS06755 bb2ae5e8e6e7c643929e88f6453a710e 149 SUPERFAMILY SSF54637 3 140 2.36E-27 T 22-04-2016 IPR029069 HotDog domain R615_RS06755 bb2ae5e8e6e7c643929e88f6453a710e 149 Gene3D G3DSA:3.10.129.10 9 139 2.1E-24 T 22-04-2016 IPR029069 HotDog domain R615_RS06755 bb2ae5e8e6e7c643929e88f6453a710e 149 PANTHER PTHR31793 12 138 3.5E-21 T 22-04-2016 R615_RS06755 bb2ae5e8e6e7c643929e88f6453a710e 149 Pfam PF13279 Thioesterase-like superfamily 20 137 1.3E-13 T 22-04-2016 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 1.3E-60 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 230 5.3E-37 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 SUPERFAMILY SSF48179 623 714 3.74E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 Gene3D G3DSA:1.10.1040.10 632 711 1.3E-15 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 Gene3D G3DSA:1.10.1040.10 499 593 5.5E-23 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 SUPERFAMILY SSF48179 496 634 1.53E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 SUPERFAMILY SSF52096 2 305 3.38E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 PANTHER PTHR23309:SF18 8 715 0.0 T 22-04-2016 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 Gene3D G3DSA:3.40.50.720 314 498 1.7E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 Gene3D G3DSA:3.90.226.10 5 208 7.9E-54 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 PANTHER PTHR23309 8 715 0.0 T 22-04-2016 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 592 3.2E-27 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 R615_RS11425 b524b83b4237bb3f5b5d7eeccf913c97 715 SUPERFAMILY SSF51735 317 496 1.58E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS15470 12d6effb3b2747edec1ff4031e399e73 552 PANTHER PTHR31901:SF5 2 417 6.5E-32 T 22-04-2016 R615_RS15470 12d6effb3b2747edec1ff4031e399e73 552 PANTHER PTHR31901 2 417 6.5E-32 T 22-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- R615_RS15470 12d6effb3b2747edec1ff4031e399e73 552 Pfam PF03321 GH3 auxin-responsive promoter 28 529 2.9E-87 T 22-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- R615_RS03435 530782cd894307e929e320e3af8adf0a 678 SUPERFAMILY SSF55816 395 634 3.27E-41 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 Pfam PF02872 5'-nucleotidase, C-terminal domain 396 587 8.2E-27 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 Gene3D G3DSA:3.90.780.10 396 633 4.0E-43 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 ProSitePatterns PS00786 5'-nucleotidase signature 2. 137 148 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 Gene3D G3DSA:3.60.21.10 42 392 1.8E-81 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS03435 530782cd894307e929e320e3af8adf0a 678 Pfam PF00149 Calcineurin-like phosphoesterase 51 294 4.9E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 PANTHER PTHR11575 42 677 2.3E-203 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 ProSitePatterns PS00785 5'-nucleotidase signature 1. 51 63 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 SUPERFAMILY SSF56300 45 392 1.18E-73 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS03435 530782cd894307e929e320e3af8adf0a 678 PRINTS PR01607 Apyrase family signature 277 300 1.1E-28 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 PRINTS PR01607 Apyrase family signature 318 338 1.1E-28 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 PRINTS PR01607 Apyrase family signature 49 67 1.1E-28 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 PRINTS PR01607 Apyrase family signature 249 266 1.1E-28 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 PRINTS PR01607 Apyrase family signature 464 487 1.1E-28 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 PRINTS PR01607 Apyrase family signature 564 583 1.1E-28 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS03435 530782cd894307e929e320e3af8adf0a 678 PANTHER PTHR11575:SF6 42 677 2.3E-203 T 22-04-2016 R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 Gene3D G3DSA:3.40.50.1000 253 381 1.3E-42 T 22-04-2016 IPR023214 HAD-like domain R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 SUPERFAMILY SSF55021 112 184 2.9E-6 T 22-04-2016 R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 Gene3D G3DSA:3.30.70.260 4 81 8.1E-15 T 22-04-2016 R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 Gene3D G3DSA:3.30.70.260 112 191 2.2E-12 T 22-04-2016 R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 Pfam PF12710 haloacid dehalogenase-like hydrolase 192 359 6.2E-23 T 22-04-2016 R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 SUPERFAMILY SSF55021 4 80 2.0E-11 T 22-04-2016 R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 191 361 2.2E-35 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 SUPERFAMILY SSF56784 189 394 2.31E-54 T 22-04-2016 IPR023214 HAD-like domain R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 176 394 4.4E-82 T 22-04-2016 R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 Gene3D G3DSA:1.10.150.210 201 252 5.6E-27 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 PANTHER PTHR10000:SF7 186 400 4.5E-94 T 22-04-2016 R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 PANTHER PTHR10000 186 400 4.5E-94 T 22-04-2016 R615_RS02325 54aae6d2c900b39768a87a796a6def2b 402 Pfam PF13740 ACT domain 3 78 2.5E-25 T 22-04-2016 R615_RS13030 379234bd6efcee0ac9cfff4572f87f34 449 Pfam PF01938 TRAM domain 380 443 8.9E-17 T 22-04-2016 IPR002792 TRAM domain R615_RS13030 379234bd6efcee0ac9cfff4572f87f34 449 SUPERFAMILY SSF102114 120 373 1.15E-62 T 22-04-2016 R615_RS13030 379234bd6efcee0ac9cfff4572f87f34 449 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 7 440 3.0E-150 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 R615_RS13030 379234bd6efcee0ac9cfff4572f87f34 449 PANTHER PTHR11918:SF43 1 444 4.1E-201 T 22-04-2016 R615_RS13030 379234bd6efcee0ac9cfff4572f87f34 449 Gene3D G3DSA:3.80.30.20 149 382 3.1E-78 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe R615_RS13030 379234bd6efcee0ac9cfff4572f87f34 449 Pfam PF00919 Uncharacterized protein family UPF0004 7 107 5.9E-29 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 R615_RS13030 379234bd6efcee0ac9cfff4572f87f34 449 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 6 443 73.348 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 R615_RS13030 379234bd6efcee0ac9cfff4572f87f34 449 PANTHER PTHR11918 1 444 4.1E-201 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein R615_RS13030 379234bd6efcee0ac9cfff4572f87f34 449 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 7 441 2.8E-181 T 22-04-2016 R615_RS13030 379234bd6efcee0ac9cfff4572f87f34 449 SMART SM00729 149 369 5.9E-63 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 R615_RS13030 379234bd6efcee0ac9cfff4572f87f34 449 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 153 173 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 R615_RS13030 379234bd6efcee0ac9cfff4572f87f34 449 Pfam PF04055 Radical SAM superfamily 153 327 1.9E-29 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 R615_RS03595 b757e137b7700634dcc91e3eacbc63de 303 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 1.4E-16 T 22-04-2016 IPR013549 Domain of unknown function DUF1731 R615_RS03595 b757e137b7700634dcc91e3eacbc63de 303 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 5 296 1.6E-99 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 R615_RS03595 b757e137b7700634dcc91e3eacbc63de 303 Gene3D G3DSA:3.40.50.720 1 203 3.9E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS03595 b757e137b7700634dcc91e3eacbc63de 303 SUPERFAMILY SSF51735 4 300 1.39E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS03595 b757e137b7700634dcc91e3eacbc63de 303 PANTHER PTHR11092:SF0 1 301 1.9E-122 T 22-04-2016 R615_RS03595 b757e137b7700634dcc91e3eacbc63de 303 Gene3D G3DSA:3.90.25.10 204 248 4.4E-5 T 22-04-2016 R615_RS03595 b757e137b7700634dcc91e3eacbc63de 303 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 218 4.6E-18 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 R615_RS03595 b757e137b7700634dcc91e3eacbc63de 303 PANTHER PTHR11092 1 301 1.9E-122 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 R615_RS06925 f8cf35ba594d323f7cce0fdeaa36d580 607 Pfam PF00920 Dehydratase family 68 601 4.3E-151 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS06925 f8cf35ba594d323f7cce0fdeaa36d580 607 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS06925 f8cf35ba594d323f7cce0fdeaa36d580 607 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 604 2.6E-279 T 22-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 R615_RS06925 f8cf35ba594d323f7cce0fdeaa36d580 607 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS06925 f8cf35ba594d323f7cce0fdeaa36d580 607 PANTHER PTHR21000:SF9 1 604 0.0 T 22-04-2016 R615_RS06925 f8cf35ba594d323f7cce0fdeaa36d580 607 SUPERFAMILY SSF52016 421 603 2.51E-50 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel R615_RS06925 f8cf35ba594d323f7cce0fdeaa36d580 607 SUPERFAMILY SSF143975 1 420 1.44E-136 T 22-04-2016 R615_RS06925 f8cf35ba594d323f7cce0fdeaa36d580 607 PANTHER PTHR21000 1 604 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 R615_RS00745 426b291ec1b126a567aa3e36cf5cbbda 235 PANTHER PTHR26402:SF576 4 226 3.6E-104 T 22-04-2016 R615_RS00745 426b291ec1b126a567aa3e36cf5cbbda 235 SUPERFAMILY SSF46894 129 227 3.97E-29 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS00745 426b291ec1b126a567aa3e36cf5cbbda 235 Gene3D G3DSA:1.10.10.10 128 228 1.5E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00745 426b291ec1b126a567aa3e36cf5cbbda 235 Gene3D G3DSA:3.40.50.2300 5 125 7.0E-41 T 22-04-2016 R615_RS00745 426b291ec1b126a567aa3e36cf5cbbda 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 1.6E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS00745 426b291ec1b126a567aa3e36cf5cbbda 235 SMART SM00862 151 226 4.7E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 R615_RS00745 426b291ec1b126a567aa3e36cf5cbbda 235 PANTHER PTHR26402 4 226 3.6E-104 T 22-04-2016 R615_RS00745 426b291ec1b126a567aa3e36cf5cbbda 235 SUPERFAMILY SSF52172 2 130 8.68E-43 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS00745 426b291ec1b126a567aa3e36cf5cbbda 235 SMART SM00448 4 117 2.7E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS00745 426b291ec1b126a567aa3e36cf5cbbda 235 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 5 226 4.2E-95 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 R615_RS00745 426b291ec1b126a567aa3e36cf5cbbda 235 Pfam PF00072 Response regulator receiver domain 6 118 9.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS07435 6248a074933a131771fb6a06d126fba6 562 Pfam PF01740 STAS domain 448 555 5.5E-18 T 22-04-2016 IPR002645 STAS domain R615_RS07435 6248a074933a131771fb6a06d126fba6 562 PANTHER PTHR11814:SF71 7 559 1.2E-158 T 22-04-2016 R615_RS07435 6248a074933a131771fb6a06d126fba6 562 Pfam PF00916 Sulfate permease family 17 396 8.8E-88 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 R615_RS07435 6248a074933a131771fb6a06d126fba6 562 PANTHER PTHR11814 7 559 1.2E-158 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 R615_RS07435 6248a074933a131771fb6a06d126fba6 562 TIGRFAM TIGR00815 sulP: sulfate permease 6 555 1.3E-119 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 R615_RS07435 6248a074933a131771fb6a06d126fba6 562 Gene3D G3DSA:3.30.750.24 448 559 3.8E-16 T 22-04-2016 IPR002645 STAS domain R615_RS07435 6248a074933a131771fb6a06d126fba6 562 SUPERFAMILY SSF52091 446 559 6.87E-18 T 22-04-2016 IPR002645 STAS domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 SMART SM00387 431 528 4.2E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 Pfam PF13426 PAS domain 84 184 7.5E-9 T 22-04-2016 IPR000014 PAS domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 Gene3D G3DSA:3.30.450.20 71 191 7.6E-14 T 22-04-2016 R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 SUPERFAMILY SSF55785 58 177 8.55E-14 T 22-04-2016 IPR000014 PAS domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 SUPERFAMILY SSF55874 403 526 6.55E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 PANTHER PTHR24423 39 525 1.1E-53 T 22-04-2016 R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 PANTHER PTHR24423:SF468 39 525 1.1E-53 T 22-04-2016 R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 Pfam PF07568 Histidine kinase 334 408 3.5E-25 T 22-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 Gene3D G3DSA:3.30.565.10 398 526 1.3E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 Pfam PF00989 PAS fold 198 311 3.0E-13 T 22-04-2016 IPR013767 PAS fold GO:0006355 R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 438 526 1.4E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 Gene3D G3DSA:3.30.450.20 192 312 6.7E-23 T 22-04-2016 R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 196 321 9.5E-21 T 22-04-2016 IPR000014 PAS domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 66 193 2.5E-8 T 22-04-2016 IPR000014 PAS domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 SMART SM00091 69 135 1.2E-4 T 22-04-2016 IPR000014 PAS domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 SMART SM00091 198 264 2.2E-10 T 22-04-2016 IPR000014 PAS domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 SUPERFAMILY SSF55785 183 312 5.06E-24 T 22-04-2016 IPR000014 PAS domain R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 SMART SM00086 274 314 6.2 T 22-04-2016 IPR001610 PAC motif R615_RS17400 05526da2963161cd3cf67ca6b659b4c9 531 SMART SM00086 144 186 5.9 T 22-04-2016 IPR001610 PAC motif R615_RS08485 98e2bf39c047fbe110810a9cb09c7d71 124 TIGRFAM TIGR00494 crcB: protein CrcB 4 119 2.0E-27 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 R615_RS08485 98e2bf39c047fbe110810a9cb09c7d71 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 116 3.3E-25 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 R615_RS08485 98e2bf39c047fbe110810a9cb09c7d71 124 PANTHER PTHR28259 1 119 1.6E-35 T 22-04-2016 R615_RS08485 98e2bf39c047fbe110810a9cb09c7d71 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 121 18.474 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 R615_RS12515 e1eee76698d8550297962d8075a7d14d 229 SMART SM00535 20 148 9.5E-52 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 R615_RS12515 e1eee76698d8550297962d8075a7d14d 229 PANTHER PTHR11207 2 226 1.4E-77 T 22-04-2016 R615_RS12515 e1eee76698d8550297962d8075a7d14d 229 Gene3D G3DSA:3.30.160.20 152 222 1.3E-21 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain R615_RS12515 e1eee76698d8550297962d8075a7d14d 229 Pfam PF00035 Double-stranded RNA binding motif 155 222 9.2E-11 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain R615_RS12515 e1eee76698d8550297962d8075a7d14d 229 Gene3D G3DSA:1.10.1520.10 7 143 1.2E-45 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 R615_RS12515 e1eee76698d8550297962d8075a7d14d 229 SMART SM00358 155 223 8.7E-17 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain R615_RS12515 e1eee76698d8550297962d8075a7d14d 229 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 220 2.1E-70 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 R615_RS12515 e1eee76698d8550297962d8075a7d14d 229 Pfam PF14622 Ribonuclease-III-like 18 141 1.3E-33 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 R615_RS12515 e1eee76698d8550297962d8075a7d14d 229 SUPERFAMILY SSF69065 4 158 2.27E-48 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 R615_RS12515 e1eee76698d8550297962d8075a7d14d 229 SUPERFAMILY SSF54768 108 224 8.43E-25 T 22-04-2016 R615_RS12515 e1eee76698d8550297962d8075a7d14d 229 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 R615_RS12515 e1eee76698d8550297962d8075a7d14d 229 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.403 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 PANTHER PTHR32282 1 291 1.7E-254 T 22-04-2016 R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 PANTHER PTHR32282 677 839 1.7E-254 T 22-04-2016 R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 PANTHER PTHR32282 424 615 1.7E-254 T 22-04-2016 R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 Gene3D G3DSA:2.40.50.140 353 424 4.1E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 Pfam PF00912 Transglycosylase 38 210 9.9E-63 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 Pfam PF17092 Penicillin-binding protein OB-like domain 332 428 4.7E-14 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 Gene3D G3DSA:3.40.710.10 214 294 4.7E-135 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 Gene3D G3DSA:3.40.710.10 678 821 4.7E-135 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 Gene3D G3DSA:3.40.710.10 425 616 4.7E-135 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 SUPERFAMILY SSF56601 425 613 6.2E-129 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 SUPERFAMILY SSF56601 677 820 6.2E-129 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 SUPERFAMILY SSF56601 192 214 6.2E-129 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 SUPERFAMILY SSF56601 243 294 6.2E-129 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 PANTHER PTHR32282:SF5 1 291 1.7E-254 T 22-04-2016 R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 PANTHER PTHR32282:SF5 677 839 1.7E-254 T 22-04-2016 R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 PANTHER PTHR32282:SF5 424 615 1.7E-254 T 22-04-2016 R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 SUPERFAMILY SSF53955 24 236 1.46E-73 T 22-04-2016 IPR023346 Lysozyme-like domain R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 Pfam PF00905 Penicillin binding protein transpeptidase domain 430 602 6.4E-24 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 Gene3D G3DSA:1.10.3810.10 38 213 1.9E-71 T 22-04-2016 R615_RS14965 e23eef1bc645ee9dea960386f5b92dbc 841 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 46 771 6.9E-179 T 22-04-2016 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 PANTHER PTHR11575:SF7 57 346 5.4E-111 T 22-04-2016 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 PANTHER PTHR11575:SF7 381 621 5.4E-111 T 22-04-2016 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 SUPERFAMILY SSF56300 57 364 5.15E-72 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 PRINTS PR01607 Apyrase family signature 569 588 1.2E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 PRINTS PR01607 Apyrase family signature 487 510 1.2E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 PRINTS PR01607 Apyrase family signature 323 343 1.2E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 PRINTS PR01607 Apyrase family signature 56 74 1.2E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 PRINTS PR01607 Apyrase family signature 276 299 1.2E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 PRINTS PR01607 Apyrase family signature 257 274 1.2E-32 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 Gene3D G3DSA:3.90.780.10 447 623 6.3E-45 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 PANTHER PTHR11575 57 346 5.4E-111 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 PANTHER PTHR11575 381 621 5.4E-111 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 ProSitePatterns PS00786 5'-nucleotidase signature 2. 153 164 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 SUPERFAMILY SSF55816 419 627 5.36E-48 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 Gene3D G3DSA:3.60.21.10 52 362 1.0E-79 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 Gene3D G3DSA:3.60.21.10 396 414 1.0E-79 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 Pfam PF00149 Calcineurin-like phosphoesterase 58 293 3.8E-7 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 TIGRFAM TIGR01530 nadN: NAD nucleotidase 58 618 9.4E-133 T 22-04-2016 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN GO:0008253|GO:0009166 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 R615_RS06310 568879a3f2282f5fbdbe67df04dcb550 658 Pfam PF02872 5'-nucleotidase, C-terminal domain 449 595 1.2E-38 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 R615_RS10245 5a695a372f4cd273f5ad0d82bd13ae77 467 Gene3D G3DSA:1.10.3720.10 236 460 1.5E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS10245 5a695a372f4cd273f5ad0d82bd13ae77 467 PANTHER PTHR30465 222 464 7.1E-87 T 22-04-2016 R615_RS10245 5a695a372f4cd273f5ad0d82bd13ae77 467 SUPERFAMILY SSF161098 241 441 1.15E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS10245 5a695a372f4cd273f5ad0d82bd13ae77 467 PANTHER PTHR30465:SF2 222 464 7.1E-87 T 22-04-2016 R615_RS10245 5a695a372f4cd273f5ad0d82bd13ae77 467 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 259 461 1.8E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS02460 be935d6ff17a48470a0be0dbeaf3a6c2 289 PANTHER PTHR10264:SF80 7 289 4.5E-99 T 22-04-2016 R615_RS02460 be935d6ff17a48470a0be0dbeaf3a6c2 289 Pfam PF01145 SPFH domain / Band 7 family 25 201 1.3E-29 T 22-04-2016 IPR001107 Band 7 domain R615_RS02460 be935d6ff17a48470a0be0dbeaf3a6c2 289 SUPERFAMILY SSF117892 54 191 1.44E-26 T 22-04-2016 IPR001107 Band 7 domain R615_RS02460 be935d6ff17a48470a0be0dbeaf3a6c2 289 PANTHER PTHR10264 7 289 4.5E-99 T 22-04-2016 IPR001972 Stomatin family GO:0016020 R615_RS02460 be935d6ff17a48470a0be0dbeaf3a6c2 289 SMART SM00244 21 185 4.9E-37 T 22-04-2016 IPR001107 Band 7 domain R615_RS02460 be935d6ff17a48470a0be0dbeaf3a6c2 289 PIRSF PIRSF005651 1 289 1.8E-93 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 R615_RS02460 be935d6ff17a48470a0be0dbeaf3a6c2 289 TIGRFAM TIGR01932 hflC: HflC protein 7 157 6.6E-40 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 R615_RS02460 be935d6ff17a48470a0be0dbeaf3a6c2 289 TIGRFAM TIGR01932 hflC: HflC protein 152 283 2.7E-47 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 R615_RS10020 b6e2a0a5552b7bd3da0306ab25233b83 490 Gene3D G3DSA:1.20.1250.20 293 472 3.7E-24 T 22-04-2016 R615_RS10020 b6e2a0a5552b7bd3da0306ab25233b83 490 Pfam PF07690 Major Facilitator Superfamily 22 237 5.5E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 R615_RS10020 b6e2a0a5552b7bd3da0306ab25233b83 490 Pfam PF07690 Major Facilitator Superfamily 300 476 4.8E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 R615_RS10020 b6e2a0a5552b7bd3da0306ab25233b83 490 ProSitePatterns PS00216 Sugar transport proteins signature 1. 349 366 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 R615_RS10020 b6e2a0a5552b7bd3da0306ab25233b83 490 PANTHER PTHR23515:SF2 3 217 6.4E-89 T 22-04-2016 R615_RS10020 b6e2a0a5552b7bd3da0306ab25233b83 490 PANTHER PTHR23515:SF2 285 486 6.4E-89 T 22-04-2016 R615_RS10020 b6e2a0a5552b7bd3da0306ab25233b83 490 PANTHER PTHR23515 3 217 6.4E-89 T 22-04-2016 R615_RS10020 b6e2a0a5552b7bd3da0306ab25233b83 490 PANTHER PTHR23515 285 486 6.4E-89 T 22-04-2016 R615_RS10020 b6e2a0a5552b7bd3da0306ab25233b83 490 TIGRFAM TIGR00886 2A0108: nitrite transporter 16 433 1.3E-100 T 22-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 R615_RS10020 b6e2a0a5552b7bd3da0306ab25233b83 490 SUPERFAMILY SSF103473 14 203 3.01E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS10020 b6e2a0a5552b7bd3da0306ab25233b83 490 SUPERFAMILY SSF103473 276 472 3.01E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS10020 b6e2a0a5552b7bd3da0306ab25233b83 490 Gene3D G3DSA:1.20.1250.20 16 199 3.4E-28 T 22-04-2016 R615_RS16690 abfcef8cb382690a126204fae68c9a64 139 Pfam PF01479 S4 domain 16 60 3.4E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS16690 abfcef8cb382690a126204fae68c9a64 139 Gene3D G3DSA:3.10.290.10 13 112 8.4E-36 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS16690 abfcef8cb382690a126204fae68c9a64 139 PANTHER PTHR11079:SF70 10 116 1.0E-19 T 22-04-2016 R615_RS16690 abfcef8cb382690a126204fae68c9a64 139 SMART SM00363 15 78 5.2E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS16690 abfcef8cb382690a126204fae68c9a64 139 PANTHER PTHR11079 10 116 1.0E-19 T 22-04-2016 R615_RS16690 abfcef8cb382690a126204fae68c9a64 139 SUPERFAMILY SSF55174 14 108 9.42E-28 T 22-04-2016 R615_RS16690 abfcef8cb382690a126204fae68c9a64 139 PIRSF PIRSF016821 12 139 4.2E-42 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 R615_RS09755 232fce24f36b16091f1aa00e047a0406 203 Pfam PF04326 Putative DNA-binding domain 49 184 6.2E-19 T 22-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 R615_RS09755 232fce24f36b16091f1aa00e047a0406 203 PANTHER PTHR12155 44 128 1.7E-13 T 22-04-2016 IPR029684 Schlafen family R615_RS13925 ed60807826ae47ec248a51b37387bccb 133 SUPERFAMILY SSF53271 23 125 5.11E-22 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS13925 ed60807826ae47ec248a51b37387bccb 133 PANTHER PTHR11907 12 126 4.8E-23 T 22-04-2016 R615_RS13925 ed60807826ae47ec248a51b37387bccb 133 Pfam PF00156 Phosphoribosyl transferase domain 36 124 1.9E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 R615_RS13925 ed60807826ae47ec248a51b37387bccb 133 Gene3D G3DSA:3.40.50.2020 11 125 6.2E-22 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS13925 ed60807826ae47ec248a51b37387bccb 133 PANTHER PTHR11907:SF9 12 126 4.8E-23 T 22-04-2016 R615_RS00925 2f4ec26b61846cc2d0f157a9750bad90 412 Pfam PF02441 Flavoprotein 8 135 4.3E-33 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 R615_RS00925 2f4ec26b61846cc2d0f157a9750bad90 412 SUPERFAMILY SSF102645 188 401 1.27E-77 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 R615_RS00925 2f4ec26b61846cc2d0f157a9750bad90 412 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 393 7.1E-144 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 R615_RS00925 2f4ec26b61846cc2d0f157a9750bad90 412 SUPERFAMILY SSF52507 1 184 4.32E-60 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 R615_RS00925 2f4ec26b61846cc2d0f157a9750bad90 412 Gene3D G3DSA:3.40.50.1950 2 187 1.0E-63 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 R615_RS00925 2f4ec26b61846cc2d0f157a9750bad90 412 Gene3D G3DSA:3.40.50.10300 188 400 3.0E-88 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 R615_RS00925 2f4ec26b61846cc2d0f157a9750bad90 412 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 189 370 9.3E-73 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 R615_RS00925 2f4ec26b61846cc2d0f157a9750bad90 412 PANTHER PTHR14359 6 403 1.2E-186 T 22-04-2016 R615_RS00925 2f4ec26b61846cc2d0f157a9750bad90 412 PANTHER PTHR14359:SF20 6 403 1.2E-186 T 22-04-2016 R615_RS02220 22c0c5d8d7faef34f87337ded49d581b 296 SUPERFAMILY SSF55073 4 171 1.05E-34 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS02220 22c0c5d8d7faef34f87337ded49d581b 296 SMART SM00044 2 154 0.0082 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 R615_RS02220 22c0c5d8d7faef34f87337ded49d581b 296 Gene3D G3DSA:3.30.70.1230 3 173 8.6E-26 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 R615_RS02220 22c0c5d8d7faef34f87337ded49d581b 296 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 4 163 7.1E-16 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 R615_RS02220 22c0c5d8d7faef34f87337ded49d581b 296 Pfam PF00498 FHA domain 213 256 3.8E-10 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 R615_RS02220 22c0c5d8d7faef34f87337ded49d581b 296 Gene3D G3DSA:2.60.200.20 180 255 7.4E-13 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 R615_RS02220 22c0c5d8d7faef34f87337ded49d581b 296 SUPERFAMILY SSF49879 203 255 1.28E-14 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 R615_RS12295 5068b238457c70fee96ef65dc79d5be1 106 PANTHER PTHR33569 1 102 1.0E-61 T 22-04-2016 R615_RS12295 5068b238457c70fee96ef65dc79d5be1 106 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.617 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12295 5068b238457c70fee96ef65dc79d5be1 106 SUPERFAMILY SSF51278 1 104 3.79E-47 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12295 5068b238457c70fee96ef65dc79d5be1 106 Gene3D G3DSA:2.10.150.10 1 104 1.2E-50 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12295 5068b238457c70fee96ef65dc79d5be1 106 PANTHER PTHR33569:SF1 1 102 1.0E-61 T 22-04-2016 R615_RS12295 5068b238457c70fee96ef65dc79d5be1 106 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 1.6E-45 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12295 5068b238457c70fee96ef65dc79d5be1 106 Pfam PF00699 Urease beta subunit 3 99 1.2E-44 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 Gene3D G3DSA:3.40.50.720 2 222 7.7E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.6E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.6E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 5.6E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.6E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 5.6E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 Pfam PF00106 short chain dehydrogenase 2 189 2.3E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 PANTHER PTHR24322 6 134 1.6E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 PANTHER PTHR24322 150 182 1.6E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS00205 967ab398ef01be9eaddad63a93f79e09 270 SUPERFAMILY SSF51735 2 258 2.7E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS16185 66a5c8b82670f6f508154c3ed5ffcf90 228 PIRSF PIRSF004848 1 228 3.3E-73 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 R615_RS16185 66a5c8b82670f6f508154c3ed5ffcf90 228 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 R615_RS16185 66a5c8b82670f6f508154c3ed5ffcf90 228 Gene3D G3DSA:3.20.20.10 1 228 5.9E-88 T 22-04-2016 IPR029066 PLP-binding barrel R615_RS16185 66a5c8b82670f6f508154c3ed5ffcf90 228 SUPERFAMILY SSF51419 1 225 2.88E-79 T 22-04-2016 IPR029066 PLP-binding barrel R615_RS16185 66a5c8b82670f6f508154c3ed5ffcf90 228 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 2.1E-81 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 R615_RS16185 66a5c8b82670f6f508154c3ed5ffcf90 228 Pfam PF01168 Alanine racemase, N-terminal domain 27 227 2.2E-25 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 R615_RS16185 66a5c8b82670f6f508154c3ed5ffcf90 228 PANTHER PTHR10146 1 228 1.7E-95 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 SMART SM01049 35 127 6.3E-22 T 22-04-2016 IPR033480 Single Cache domain 2 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 SUPERFAMILY SSF58104 230 539 1.11E-63 T 22-04-2016 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 Pfam PF17200 Single Cache domain 2 40 185 1.2E-31 T 22-04-2016 IPR033480 Single Cache domain 2 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 Pfam PF00672 HAMP domain 199 258 1.1E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 PANTHER PTHR32089:SF64 78 541 3.1E-103 T 22-04-2016 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 Gene3D G3DSA:1.10.287.950 292 508 1.1E-48 T 22-04-2016 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 PANTHER PTHR32089 78 541 3.1E-103 T 22-04-2016 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 Gene3D G3DSA:3.30.450.20 25 180 1.3E-42 T 22-04-2016 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 SMART SM00304 210 262 8.8E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 SMART SM00283 277 538 4.6E-56 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 537 6.6E-41 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 1.3E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 1.3E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS09570 b2e3b7bbffa27225a66a71778df9df94 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 1.3E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS12150 0ac29e245941d1aeb465faba67b5b538 203 Gene3D G3DSA:2.30.110.10 11 191 4.5E-48 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 R615_RS12150 0ac29e245941d1aeb465faba67b5b538 203 Pfam PF01613 Flavin reductase like domain 22 163 4.3E-16 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 R615_RS12150 0ac29e245941d1aeb465faba67b5b538 203 SMART SM00903 19 173 3.4E-9 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 R615_RS12150 0ac29e245941d1aeb465faba67b5b538 203 PANTHER PTHR33798:SF1 1 202 4.3E-45 T 22-04-2016 R615_RS12150 0ac29e245941d1aeb465faba67b5b538 203 SUPERFAMILY SSF50475 1 198 7.85E-35 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 R615_RS12150 0ac29e245941d1aeb465faba67b5b538 203 PANTHER PTHR33798 1 202 4.3E-45 T 22-04-2016 R615_RS05885 032718816059cce4528a9138b6b96925 147 Gene3D G3DSA:3.40.50.1810 2 112 9.0E-4 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 R615_RS05885 032718816059cce4528a9138b6b96925 147 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 145 1.5E-66 T 22-04-2016 IPR019884 YtoQ family protein R615_RS05885 032718816059cce4528a9138b6b96925 147 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 144 3.3E-68 T 22-04-2016 IPR019884 YtoQ family protein R615_RS15520 1ef3fb8f6559817bf529063e2de32d4c 166 SUPERFAMILY SSF46785 22 152 6.94E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS15520 1ef3fb8f6559817bf529063e2de32d4c 166 Gene3D G3DSA:1.10.10.10 21 89 1.3E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS15520 1ef3fb8f6559817bf529063e2de32d4c 166 PANTHER PTHR33202:SF6 7 155 1.2E-55 T 22-04-2016 R615_RS15520 1ef3fb8f6559817bf529063e2de32d4c 166 PANTHER PTHR33202 7 155 1.2E-55 T 22-04-2016 R615_RS15520 1ef3fb8f6559817bf529063e2de32d4c 166 Pfam PF01475 Ferric uptake regulator family 29 147 1.5E-9 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 R615_RS07610 e7d81bbc39fa8798a8585a960c389bff 235 Gene3D G3DSA:3.40.50.720 3 233 3.6E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07610 e7d81bbc39fa8798a8585a960c389bff 235 PANTHER PTHR24322:SF540 148 181 9.4E-27 T 22-04-2016 R615_RS07610 e7d81bbc39fa8798a8585a960c389bff 235 PANTHER PTHR24322:SF540 5 129 9.4E-27 T 22-04-2016 R615_RS07610 e7d81bbc39fa8798a8585a960c389bff 235 Pfam PF00106 short chain dehydrogenase 3 192 4.0E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07610 e7d81bbc39fa8798a8585a960c389bff 235 PANTHER PTHR24322 148 181 9.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07610 e7d81bbc39fa8798a8585a960c389bff 235 PANTHER PTHR24322 5 129 9.4E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07610 e7d81bbc39fa8798a8585a960c389bff 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.4E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07610 e7d81bbc39fa8798a8585a960c389bff 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.4E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07610 e7d81bbc39fa8798a8585a960c389bff 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.4E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07610 e7d81bbc39fa8798a8585a960c389bff 235 SUPERFAMILY SSF51735 3 235 1.95E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS01030 31eab16421e6146f5b2c5af0e51bbda4 115 PANTHER PTHR33162:SF4 1 65 1.7E-22 T 22-04-2016 R615_RS01030 31eab16421e6146f5b2c5af0e51bbda4 115 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 114 14.941 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 R615_RS01030 31eab16421e6146f5b2c5af0e51bbda4 115 PANTHER PTHR33162 1 65 1.7E-22 T 22-04-2016 R615_RS01030 31eab16421e6146f5b2c5af0e51bbda4 115 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 65 9.0E-23 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 R615_RS01030 31eab16421e6146f5b2c5af0e51bbda4 115 Pfam PF02416 mttA/Hcf106 family 4 51 1.2E-6 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 R615_RS01030 31eab16421e6146f5b2c5af0e51bbda4 115 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 7.3E-20 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 R615_RS01030 31eab16421e6146f5b2c5af0e51bbda4 115 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 7.3E-20 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 R615_RS01030 31eab16421e6146f5b2c5af0e51bbda4 115 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 7.3E-20 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 R615_RS14170 3e8ef7fb510859e68e4d9fec344fb092 207 Pfam PF02169 LPP20 lipoprotein 72 150 5.7E-11 T 22-04-2016 IPR024952 Lipoprotein LPP20-like R615_RS13780 8443a3d7aa85497481440ce705228a44 221 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 10 207 33.532 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 R615_RS13780 8443a3d7aa85497481440ce705228a44 221 SUPERFAMILY SSF52507 11 207 1.96E-55 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 R615_RS13780 8443a3d7aa85497481440ce705228a44 221 Pfam PF02441 Flavoprotein 11 151 5.2E-25 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 R615_RS13780 8443a3d7aa85497481440ce705228a44 221 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 11 205 4.0E-56 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 R615_RS13780 8443a3d7aa85497481440ce705228a44 221 PANTHER PTHR30108:SF2 82 211 9.9E-75 T 22-04-2016 R615_RS13780 8443a3d7aa85497481440ce705228a44 221 PANTHER PTHR30108:SF2 7 65 9.9E-75 T 22-04-2016 R615_RS13780 8443a3d7aa85497481440ce705228a44 221 Gene3D G3DSA:3.40.50.1950 11 207 5.0E-69 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 R615_RS13780 8443a3d7aa85497481440ce705228a44 221 PANTHER PTHR30108 82 211 9.9E-75 T 22-04-2016 R615_RS13780 8443a3d7aa85497481440ce705228a44 221 PANTHER PTHR30108 7 65 9.9E-75 T 22-04-2016 R615_RS05790 c487e835a40b86095144aecec98484b6 252 SUPERFAMILY SSF52540 2 231 1.56E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05790 c487e835a40b86095144aecec98484b6 252 Pfam PF00005 ABC transporter 17 172 1.6E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS05790 c487e835a40b86095144aecec98484b6 252 PANTHER PTHR24220:SF85 3 249 1.3E-125 T 22-04-2016 R615_RS05790 c487e835a40b86095144aecec98484b6 252 PANTHER PTHR24220 3 249 1.3E-125 T 22-04-2016 R615_RS05790 c487e835a40b86095144aecec98484b6 252 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 3 244 6.3E-109 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 R615_RS05790 c487e835a40b86095144aecec98484b6 252 SMART SM00382 26 223 1.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS05790 c487e835a40b86095144aecec98484b6 252 Gene3D G3DSA:3.40.50.300 1 235 4.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14420 dedb928cf144a3f18c1473eef412c5e0 107 Gene3D G3DSA:3.30.70.20 4 101 8.5E-21 T 22-04-2016 R615_RS14420 dedb928cf144a3f18c1473eef412c5e0 107 SUPERFAMILY SSF54862 3 95 6.9E-23 T 22-04-2016 R615_RS14420 dedb928cf144a3f18c1473eef412c5e0 107 PANTHER PTHR11938:SF101 1 107 3.8E-52 T 22-04-2016 R615_RS14420 dedb928cf144a3f18c1473eef412c5e0 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 106 1.7E-22 T 22-04-2016 IPR022569 Ferredoxin, C-terminal R615_RS14420 dedb928cf144a3f18c1473eef412c5e0 107 PANTHER PTHR11938 1 107 3.8E-52 T 22-04-2016 R615_RS14420 dedb928cf144a3f18c1473eef412c5e0 107 Pfam PF00037 4Fe-4S binding domain 34 55 4.1E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain R615_RS14420 dedb928cf144a3f18c1473eef412c5e0 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.5E-18 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 R615_RS14420 dedb928cf144a3f18c1473eef412c5e0 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.5E-18 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 R615_RS14420 dedb928cf144a3f18c1473eef412c5e0 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.5E-18 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 R615_RS14420 dedb928cf144a3f18c1473eef412c5e0 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site R615_RS05105 cccfe56cfd792a3dd50ef7a82c3cdc2b 272 PANTHER PTHR13696 3 258 1.3E-108 T 22-04-2016 R615_RS05105 cccfe56cfd792a3dd50ef7a82c3cdc2b 272 PANTHER PTHR13696:SF3 3 258 1.3E-108 T 22-04-2016 R615_RS05105 cccfe56cfd792a3dd50ef7a82c3cdc2b 272 PIRSF PIRSF003092 1 271 5.2E-83 T 22-04-2016 IPR025501 ATP binding protein MinD R615_RS05105 cccfe56cfd792a3dd50ef7a82c3cdc2b 272 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 215 3.7E-26 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain R615_RS05105 cccfe56cfd792a3dd50ef7a82c3cdc2b 272 Gene3D G3DSA:3.40.50.300 8 268 3.4E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05105 cccfe56cfd792a3dd50ef7a82c3cdc2b 272 SUPERFAMILY SSF52540 7 260 4.4E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 Pfam PF00593 TonB dependent receptor 581 799 7.1E-16 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 PANTHER PTHR32552 59 347 1.1E-17 T 22-04-2016 R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 PANTHER PTHR32552 8 41 1.1E-17 T 22-04-2016 R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 PANTHER PTHR32552 693 801 1.1E-17 T 22-04-2016 R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 PANTHER PTHR32552 377 661 1.1E-17 T 22-04-2016 R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 SUPERFAMILY SSF56935 28 284 8.37E-77 T 22-04-2016 R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 SUPERFAMILY SSF56935 691 801 8.37E-77 T 22-04-2016 R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 SUPERFAMILY SSF56935 340 655 8.37E-77 T 22-04-2016 R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 163 6.6E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 Gene3D G3DSA:2.40.170.20 340 658 9.6E-75 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 Gene3D G3DSA:2.40.170.20 692 801 9.6E-75 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 Gene3D G3DSA:2.40.170.20 185 284 9.6E-75 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS15205 b4c9fb758d8cd2b4fe2fbbc5191accd5 801 Gene3D G3DSA:2.170.130.10 59 170 1.2E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS06765 76abc6090dab88387cf2b57a30d71045 271 SUPERFAMILY SSF103481 169 267 9.55E-15 T 22-04-2016 R615_RS06765 76abc6090dab88387cf2b57a30d71045 271 PANTHER PTHR22911 5 271 2.4E-51 T 22-04-2016 R615_RS06765 76abc6090dab88387cf2b57a30d71045 271 Pfam PF00892 EamA-like transporter family 135 262 6.5E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS06765 76abc6090dab88387cf2b57a30d71045 271 Pfam PF00892 EamA-like transporter family 7 125 8.8E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS06765 76abc6090dab88387cf2b57a30d71045 271 PANTHER PTHR22911:SF6 5 271 2.4E-51 T 22-04-2016 R615_RS06765 76abc6090dab88387cf2b57a30d71045 271 SUPERFAMILY SSF103481 28 129 7.45E-17 T 22-04-2016 R615_RS15620 849b3f0f37669f5de7d42a16b7ebb0f1 68 SUPERFAMILY SSF47413 2 67 2.41E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS15620 849b3f0f37669f5de7d42a16b7ebb0f1 68 Pfam PF01381 Helix-turn-helix 12 63 6.9E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS15620 849b3f0f37669f5de7d42a16b7ebb0f1 68 SMART SM00530 11 66 6.1E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS15620 849b3f0f37669f5de7d42a16b7ebb0f1 68 PANTHER PTHR10245 8 67 1.4E-13 T 22-04-2016 R615_RS15620 849b3f0f37669f5de7d42a16b7ebb0f1 68 Gene3D G3DSA:1.10.260.40 1 67 5.5E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS04650 564a22cd7f0c2b0e4456c739376e46b5 150 Gene3D G3DSA:3.30.70.1290 5 131 1.2E-16 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS04650 564a22cd7f0c2b0e4456c739376e46b5 150 SUPERFAMILY SSF143422 8 135 1.96E-26 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS04650 564a22cd7f0c2b0e4456c739376e46b5 150 PANTHER PTHR36966:SF1 4 150 7.5E-27 T 22-04-2016 R615_RS04650 564a22cd7f0c2b0e4456c739376e46b5 150 PANTHER PTHR36966 4 150 7.5E-27 T 22-04-2016 R615_RS04650 564a22cd7f0c2b0e4456c739376e46b5 150 Pfam PF01797 Transposase IS200 like 19 128 1.4E-14 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS04650 564a22cd7f0c2b0e4456c739376e46b5 150 SMART SM01321 15 129 1.3E-24 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS05400 ef18f79a8058d79a7910f47f751670b3 267 PANTHER PTHR37323:SF1 1 266 1.6E-18 T 22-04-2016 R615_RS05400 ef18f79a8058d79a7910f47f751670b3 267 SUPERFAMILY SSF69593 70 258 3.14E-6 T 22-04-2016 R615_RS05400 ef18f79a8058d79a7910f47f751670b3 267 PANTHER PTHR37323 1 266 1.6E-18 T 22-04-2016 R615_RS05400 ef18f79a8058d79a7910f47f751670b3 267 Pfam PF01553 Acyltransferase 70 193 7.0E-7 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS05400 ef18f79a8058d79a7910f47f751670b3 267 SMART SM00563 76 197 1.1E-4 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 Gene3D G3DSA:3.30.470.20 195 356 4.5E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 PANTHER PTHR22931:SF7 2 266 0.0 T 22-04-2016 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 PANTHER PTHR22931 2 266 0.0 T 22-04-2016 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 PIRSF PIRSF000854 1 789 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 785 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 PANTHER PTHR22931:SF7 282 785 0.0 T 22-04-2016 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 PANTHER PTHR22931 282 785 0.0 T 22-04-2016 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 Gene3D G3DSA:3.20.20.60 480 785 4.5E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 480 780 1.9E-61 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 Gene3D G3DSA:3.30.1490.20 3 192 7.2E-67 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 SUPERFAMILY SSF56059 2 383 1.77E-105 T 22-04-2016 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 454 2.4E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 SUPERFAMILY SSF52009 347 465 6.93E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 SUPERFAMILY SSF51621 460 785 1.36E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 342 1.2E-116 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 R615_RS09190 138d808b696ee41176b78e8b189ad397 789 Gene3D G3DSA:3.50.30.10 372 469 1.3E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 R615_RS13835 6e7eaaf966d1cc6b33dcb05ff2286267 334 Pfam PF08468 Methyltransferase small domain N-terminal 7 150 8.3E-29 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS13835 6e7eaaf966d1cc6b33dcb05ff2286267 334 PANTHER PTHR18895:SF70 53 322 1.5E-56 T 22-04-2016 R615_RS13835 6e7eaaf966d1cc6b33dcb05ff2286267 334 Gene3D G3DSA:3.40.50.150 165 326 3.4E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS13835 6e7eaaf966d1cc6b33dcb05ff2286267 334 SUPERFAMILY SSF53335 159 325 7.66E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS13835 6e7eaaf966d1cc6b33dcb05ff2286267 334 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 261 267 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 R615_RS13835 6e7eaaf966d1cc6b33dcb05ff2286267 334 Pfam PF05175 Methyltransferase small domain 166 328 1.7E-55 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 R615_RS13835 6e7eaaf966d1cc6b33dcb05ff2286267 334 PANTHER PTHR18895 53 322 1.5E-56 T 22-04-2016 R615_RS15130 8df2f98619ad0c3edbeb0d27783d67b2 299 SUPERFAMILY SSF88713 2 298 2.7E-95 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 R615_RS15130 8df2f98619ad0c3edbeb0d27783d67b2 299 Gene3D G3DSA:3.20.20.370 2 298 1.0E-111 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 R615_RS15130 8df2f98619ad0c3edbeb0d27783d67b2 299 PANTHER PTHR10587 7 293 2.9E-164 T 22-04-2016 R615_RS15130 8df2f98619ad0c3edbeb0d27783d67b2 299 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 3 297 8.7E-164 T 22-04-2016 IPR017625 Putative urate catabolism protein R615_RS15130 8df2f98619ad0c3edbeb0d27783d67b2 299 PANTHER PTHR10587:SF72 7 293 2.9E-164 T 22-04-2016 R615_RS15130 8df2f98619ad0c3edbeb0d27783d67b2 299 Pfam PF01522 Polysaccharide deacetylase 74 180 5.0E-11 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 R615_RS03125 27b8a4c40792c8eaade607e38142d374 391 Gene3D G3DSA:1.20.1000.10 30 54 2.3E-5 T 22-04-2016 R615_RS03125 27b8a4c40792c8eaade607e38142d374 391 Gene3D G3DSA:1.20.1000.10 151 227 2.3E-5 T 22-04-2016 R615_RS10195 1e06d92c034e95aa90d7460c05bc642f 1220 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1052 1137 3.5E-19 T 22-04-2016 R615_RS10195 1e06d92c034e95aa90d7460c05bc642f 1220 Pfam PF13555 P-loop containing region of AAA domain 3 59 9.0E-11 T 22-04-2016 R615_RS10195 1e06d92c034e95aa90d7460c05bc642f 1220 Gene3D G3DSA:3.40.1140.10 1081 1181 1.1E-5 T 22-04-2016 R615_RS10195 1e06d92c034e95aa90d7460c05bc642f 1220 Gene3D G3DSA:3.40.1140.10 1 248 3.1E-20 T 22-04-2016 R615_RS10195 1e06d92c034e95aa90d7460c05bc642f 1220 SUPERFAMILY SSF52540 1014 1147 7.71E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10195 1e06d92c034e95aa90d7460c05bc642f 1220 SUPERFAMILY SSF52540 17 50 7.71E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.9E-54 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.9E-54 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.9E-54 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 1.9E-54 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 1.9E-54 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 1.9E-54 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.9E-54 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 1.9E-54 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.9E-54 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PANTHER PTHR22912:SF93 4 459 1.8E-245 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 SUPERFAMILY SSF55424 342 460 1.01E-28 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 455 4.9E-28 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 Gene3D G3DSA:3.50.50.60 4 140 1.3E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 Gene3D G3DSA:3.50.50.60 270 334 1.3E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 1 463 63.712 T 22-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PANTHER PTHR22912 4 459 1.8E-245 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 Gene3D G3DSA:3.50.50.60 141 269 2.7E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 SUPERFAMILY SSF51905 1 322 1.02E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 325 8.3E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.2E-29 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 1.2E-29 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 1.2E-29 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.2E-29 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 1.2E-29 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 PIRSF PIRSF000350 1 460 8.9E-70 T 22-04-2016 R615_RS08385 a7ab2eb81cd88917ad7f7a7872b033fd 463 Gene3D G3DSA:3.30.390.30 342 458 2.1E-31 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 R615_RS15590 373dedcadb18cf7ca7985dd3690d9ec7 424 SUPERFAMILY SSF56954 15 420 2.09E-44 T 22-04-2016 R615_RS15590 373dedcadb18cf7ca7985dd3690d9ec7 424 Pfam PF02321 Outer membrane efflux protein 41 218 4.3E-16 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS15590 373dedcadb18cf7ca7985dd3690d9ec7 424 Pfam PF02321 Outer membrane efflux protein 281 419 1.5E-6 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS15590 373dedcadb18cf7ca7985dd3690d9ec7 424 PANTHER PTHR30203 41 423 8.9E-14 T 22-04-2016 R615_RS15590 373dedcadb18cf7ca7985dd3690d9ec7 424 Gene3D G3DSA:1.20.1600.10 37 420 6.3E-29 T 22-04-2016 R615_RS15915 66a4973baf390a33c9d48505bf749350 124 Gene3D G3DSA:1.20.5.710 2 52 1.3E-21 T 22-04-2016 R615_RS15915 66a4973baf390a33c9d48505bf749350 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 52 1.2E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15915 66a4973baf390a33c9d48505bf749350 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 24.139 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15915 66a4973baf390a33c9d48505bf749350 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 103 7.0E-13 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 R615_RS15915 66a4973baf390a33c9d48505bf749350 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 1.7E-29 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 R615_RS15915 66a4973baf390a33c9d48505bf749350 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 1.7E-47 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15915 66a4973baf390a33c9d48505bf749350 124 Gene3D G3DSA:3.30.1390.10 53 124 9.9E-32 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like R615_RS15915 66a4973baf390a33c9d48505bf749350 124 SUPERFAMILY SSF48300 4 60 1.57E-15 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15915 66a4973baf390a33c9d48505bf749350 124 SUPERFAMILY SSF54736 54 124 8.2E-24 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like R615_RS12595 baf0fcbaa7a95945b8ec8553620f4665 160 Gene3D G3DSA:3.10.129.10 9 158 1.1E-45 T 22-04-2016 IPR029069 HotDog domain R615_RS12595 baf0fcbaa7a95945b8ec8553620f4665 160 SUPERFAMILY SSF54637 28 159 1.02E-21 T 22-04-2016 IPR029069 HotDog domain R615_RS12595 baf0fcbaa7a95945b8ec8553620f4665 160 Pfam PF14539 Domain of unknown function (DUF4442) 26 153 2.0E-34 T 22-04-2016 IPR027961 Protein of unknown function DUF4442 R615_RS03020 12cf5cb8d8ec5d181848d1473521fb59 144 Pfam PF00571 CBS domain 7 56 2.5E-10 T 22-04-2016 IPR000644 CBS domain R615_RS03020 12cf5cb8d8ec5d181848d1473521fb59 144 Pfam PF00571 CBS domain 74 125 0.0021 T 22-04-2016 IPR000644 CBS domain R615_RS03020 12cf5cb8d8ec5d181848d1473521fb59 144 PANTHER PTHR11911 6 125 8.0E-13 T 22-04-2016 R615_RS03020 12cf5cb8d8ec5d181848d1473521fb59 144 SMART SM00116 81 128 12.0 T 22-04-2016 IPR000644 CBS domain R615_RS03020 12cf5cb8d8ec5d181848d1473521fb59 144 SMART SM00116 14 61 0.0028 T 22-04-2016 IPR000644 CBS domain R615_RS03020 12cf5cb8d8ec5d181848d1473521fb59 144 Gene3D G3DSA:3.10.580.10 6 127 3.0E-19 T 22-04-2016 R615_RS03020 12cf5cb8d8ec5d181848d1473521fb59 144 SUPERFAMILY SSF54631 4 133 5.31E-21 T 22-04-2016 R615_RS09600 d4e721691af75b866ba1bc1fba3cdeb4 380 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 R615_RS09600 d4e721691af75b866ba1bc1fba3cdeb4 380 PANTHER PTHR11808:SF36 1 380 4.9E-195 T 22-04-2016 R615_RS09600 d4e721691af75b866ba1bc1fba3cdeb4 380 Gene3D G3DSA:3.40.640.10 10 244 1.0E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS09600 d4e721691af75b866ba1bc1fba3cdeb4 380 PIRSF PIRSF001434 2 380 3.7E-131 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 R615_RS09600 d4e721691af75b866ba1bc1fba3cdeb4 380 PANTHER PTHR11808 1 380 4.9E-195 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 R615_RS09600 d4e721691af75b866ba1bc1fba3cdeb4 380 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 1 377 4.6E-173 T 22-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 R615_RS09600 d4e721691af75b866ba1bc1fba3cdeb4 380 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 2 377 1.7E-139 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 R615_RS09600 d4e721691af75b866ba1bc1fba3cdeb4 380 SUPERFAMILY SSF53383 17 378 1.46E-120 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS09600 d4e721691af75b866ba1bc1fba3cdeb4 380 Gene3D G3DSA:3.90.1150.10 245 379 5.8E-52 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS08830 f1dc189822c4939580af230d8e67e3f7 103 Gene3D G3DSA:1.10.260.40 24 95 2.3E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS08830 f1dc189822c4939580af230d8e67e3f7 103 Pfam PF01381 Helix-turn-helix 40 91 1.6E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS08830 f1dc189822c4939580af230d8e67e3f7 103 SMART SM00530 39 94 3.5E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS08830 f1dc189822c4939580af230d8e67e3f7 103 SUPERFAMILY SSF47413 33 94 2.95E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS14190 f4103c8b1a00c99fcc962251d5d83533 170 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 130 8.0E-26 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS14190 f4103c8b1a00c99fcc962251d5d83533 170 PANTHER PTHR20941 1 145 1.2E-40 T 22-04-2016 R615_RS14190 f4103c8b1a00c99fcc962251d5d83533 170 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 130 3.5E-26 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS14190 f4103c8b1a00c99fcc962251d5d83533 170 Gene3D G3DSA:3.30.70.560 3 151 4.9E-38 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS14190 f4103c8b1a00c99fcc962251d5d83533 170 SUPERFAMILY SSF55083 1 153 3.66E-39 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS14190 f4103c8b1a00c99fcc962251d5d83533 170 PANTHER PTHR20941:SF12 1 145 1.2E-40 T 22-04-2016 R615_RS15835 5ed2cef8d97b4416a33043609e42cf3a 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15835 5ed2cef8d97b4416a33043609e42cf3a 63 SUPERFAMILY SSF46561 1 61 6.8E-20 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15835 5ed2cef8d97b4416a33043609e42cf3a 63 PANTHER PTHR10916 1 63 5.3E-23 T 22-04-2016 R615_RS15835 5ed2cef8d97b4416a33043609e42cf3a 63 Pfam PF00831 Ribosomal L29 protein 5 59 1.3E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15835 5ed2cef8d97b4416a33043609e42cf3a 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.9E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15835 5ed2cef8d97b4416a33043609e42cf3a 63 Gene3D G3DSA:1.10.287.310 1 60 1.1E-25 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15835 5ed2cef8d97b4416a33043609e42cf3a 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.373 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 PANTHER PTHR17630 11 162 5.1E-28 T 22-04-2016 R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 PANTHER PTHR17630 244 265 5.1E-28 T 22-04-2016 R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 Pfam PF12146 Serine aminopeptidase, S33 48 263 1.1E-15 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 SUPERFAMILY SSF53474 237 304 1.5E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 SUPERFAMILY SSF53474 19 198 1.5E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 PANTHER PTHR17630:SF50 11 162 5.1E-28 T 22-04-2016 R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 PANTHER PTHR17630:SF50 244 265 5.1E-28 T 22-04-2016 R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 74 89 1.3E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 249 263 1.3E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 125 138 1.3E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 PRINTS PR00111 Alpha/beta hydrolase fold signature 139 152 1.3E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 Gene3D G3DSA:3.40.50.1820 238 305 1.2E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS10415 4ee56720410d51b3a486e286fb8a59a1 312 Gene3D G3DSA:3.40.50.1820 21 156 1.2E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS15090 63cca7e577ded593b5b6c4c34cf267fb 354 PIRSF PIRSF001359 1 329 6.0E-82 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 R615_RS15090 63cca7e577ded593b5b6c4c34cf267fb 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 R615_RS15090 63cca7e577ded593b5b6c4c34cf267fb 354 Gene3D G3DSA:3.20.20.70 1 335 3.6E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS15090 63cca7e577ded593b5b6c4c34cf267fb 354 SUPERFAMILY SSF51569 3 328 9.23E-107 T 22-04-2016 R615_RS15090 63cca7e577ded593b5b6c4c34cf267fb 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 R615_RS15090 63cca7e577ded593b5b6c4c34cf267fb 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 2.6E-200 T 22-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 R615_RS15090 63cca7e577ded593b5b6c4c34cf267fb 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 3.1E-92 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 R615_RS15090 63cca7e577ded593b5b6c4c34cf267fb 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 5.6E-95 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 R615_RS15090 63cca7e577ded593b5b6c4c34cf267fb 354 PANTHER PTHR30304 1 147 2.6E-124 T 22-04-2016 R615_RS15090 63cca7e577ded593b5b6c4c34cf267fb 354 PANTHER PTHR30304 165 349 2.6E-124 T 22-04-2016 R615_RS12660 1dccffe41a88f708b3f696462c679faf 245 ProSitePatterns PS01318 TsaA-like domain signature. 92 103 - T 22-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site R615_RS12660 1dccffe41a88f708b3f696462c679faf 245 PANTHER PTHR12818 7 233 1.4E-90 T 22-04-2016 R615_RS12660 1dccffe41a88f708b3f696462c679faf 245 SUPERFAMILY SSF118196 7 224 5.75E-72 T 22-04-2016 IPR023370 TsaA-like domain R615_RS12660 1dccffe41a88f708b3f696462c679faf 245 Gene3D G3DSA:2.40.30.70 8 151 8.9E-52 T 22-04-2016 IPR023370 TsaA-like domain R615_RS12660 1dccffe41a88f708b3f696462c679faf 245 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 6 148 2.4E-45 T 22-04-2016 IPR023370 TsaA-like domain R615_RS12660 1dccffe41a88f708b3f696462c679faf 245 Pfam PF01980 Uncharacterised protein family UPF0066 24 144 8.8E-42 T 22-04-2016 IPR023370 TsaA-like domain R615_RS12660 1dccffe41a88f708b3f696462c679faf 245 PANTHER PTHR12818:SF6 7 233 1.4E-90 T 22-04-2016 R615_RS13700 bb28b2ff023d0ed9b9234aebfa43f6ae 887 Pfam PF13401 AAA domain 69 202 1.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS13700 bb28b2ff023d0ed9b9234aebfa43f6ae 887 Gene3D G3DSA:1.25.40.10 475 822 1.2E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS13700 bb28b2ff023d0ed9b9234aebfa43f6ae 887 Gene3D G3DSA:3.40.50.300 69 207 2.0E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13700 bb28b2ff023d0ed9b9234aebfa43f6ae 887 SUPERFAMILY SSF46894 819 884 1.8E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS13700 bb28b2ff023d0ed9b9234aebfa43f6ae 887 Gene3D G3DSA:1.10.10.10 823 884 3.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS13700 bb28b2ff023d0ed9b9234aebfa43f6ae 887 SUPERFAMILY SSF52540 62 209 2.64E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13700 bb28b2ff023d0ed9b9234aebfa43f6ae 887 SMART SM00421 824 881 7.4E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS13700 bb28b2ff023d0ed9b9234aebfa43f6ae 887 Pfam PF00196 Bacterial regulatory proteins, luxR family 826 881 2.7E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS13700 bb28b2ff023d0ed9b9234aebfa43f6ae 887 SUPERFAMILY SSF48452 474 708 5.48E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS13700 bb28b2ff023d0ed9b9234aebfa43f6ae 887 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 857 869 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS13700 bb28b2ff023d0ed9b9234aebfa43f6ae 887 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 841 857 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS13700 bb28b2ff023d0ed9b9234aebfa43f6ae 887 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 827 841 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS07280 d3a258c74af700a4eeb3345dad2cbde0 278 PANTHER PTHR11019:SF112 175 270 5.7E-12 T 22-04-2016 R615_RS07280 d3a258c74af700a4eeb3345dad2cbde0 278 PANTHER PTHR11019 175 270 5.7E-12 T 22-04-2016 R615_RS07280 d3a258c74af700a4eeb3345dad2cbde0 278 SMART SM00342 176 262 3.7E-4 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS07280 d3a258c74af700a4eeb3345dad2cbde0 278 Gene3D G3DSA:1.10.10.60 223 264 2.0E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS07280 d3a258c74af700a4eeb3345dad2cbde0 278 Pfam PF12833 Helix-turn-helix domain 184 263 1.4E-12 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS07280 d3a258c74af700a4eeb3345dad2cbde0 278 Gene3D G3DSA:1.10.10.60 176 215 3.4E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS00225 ba3a251115db2c7ac34426e1cc8801a6 355 SUPERFAMILY SSF63829 39 270 6.05E-45 T 22-04-2016 R615_RS00225 ba3a251115db2c7ac34426e1cc8801a6 355 SUPERFAMILY SSF63829 303 353 6.05E-45 T 22-04-2016 R615_RS00225 ba3a251115db2c7ac34426e1cc8801a6 355 PANTHER PTHR10426 1 355 9.5E-102 T 22-04-2016 IPR004141 Strictosidine synthase GO:0009058|GO:0016844 R615_RS00225 ba3a251115db2c7ac34426e1cc8801a6 355 Gene3D G3DSA:2.120.10.30 48 271 1.4E-49 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like R615_RS00225 ba3a251115db2c7ac34426e1cc8801a6 355 Gene3D G3DSA:2.120.10.30 304 354 1.4E-49 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like R615_RS00225 ba3a251115db2c7ac34426e1cc8801a6 355 Pfam PF03088 Strictosidine synthase 151 235 2.4E-19 T 22-04-2016 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 R615_RS03575 bba8ef2cb8460fe62719d0889bbae3d8 307 PIRSF PIRSF037004 1 307 2.1E-109 T 22-04-2016 IPR017087 Uncharacterised conserved protein UCP037004 R615_RS03575 bba8ef2cb8460fe62719d0889bbae3d8 307 Pfam PF08349 Protein of unknown function (DUF1722) 180 298 3.0E-41 T 22-04-2016 IPR013560 Domain of unknown function DUF1722 R615_RS03575 bba8ef2cb8460fe62719d0889bbae3d8 307 PANTHER PTHR30087 1 307 1.6E-111 T 22-04-2016 R615_RS03575 bba8ef2cb8460fe62719d0889bbae3d8 307 PANTHER PTHR30087:SF0 1 307 1.6E-111 T 22-04-2016 R615_RS03575 bba8ef2cb8460fe62719d0889bbae3d8 307 Pfam PF04463 Protein of unknown function (DUF523) 1 136 5.1E-28 T 22-04-2016 IPR007553 Domain of unknown function DUF523 R615_RS00180 139b6b5014d8ac5baddbc1866eeaaa71 464 SUPERFAMILY SSF53383 125 463 9.11E-77 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS00180 139b6b5014d8ac5baddbc1866eeaaa71 464 Gene3D G3DSA:3.40.640.10 133 356 2.1E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS00180 139b6b5014d8ac5baddbc1866eeaaa71 464 Pfam PF00155 Aminotransferase class I and II 132 451 1.5E-32 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 R615_RS00180 139b6b5014d8ac5baddbc1866eeaaa71 464 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 1.5E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS00180 139b6b5014d8ac5baddbc1866eeaaa71 464 PANTHER PTHR11751:SF275 98 456 3.4E-90 T 22-04-2016 R615_RS00180 139b6b5014d8ac5baddbc1866eeaaa71 464 SUPERFAMILY SSF46785 5 72 8.92E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00180 139b6b5014d8ac5baddbc1866eeaaa71 464 SMART SM00345 9 68 9.8E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS00180 139b6b5014d8ac5baddbc1866eeaaa71 464 Gene3D G3DSA:1.10.10.10 5 68 1.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00180 139b6b5014d8ac5baddbc1866eeaaa71 464 PANTHER PTHR11751 98 456 3.4E-90 T 22-04-2016 R615_RS05480 8ad921ccd9cf67fb9070b1831ed0652f 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 144 313 4.8E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS05480 8ad921ccd9cf67fb9070b1831ed0652f 321 PANTHER PTHR30151 92 320 2.3E-60 T 22-04-2016 R615_RS05480 8ad921ccd9cf67fb9070b1831ed0652f 321 PANTHER PTHR30151:SF0 92 320 2.3E-60 T 22-04-2016 R615_RS05480 8ad921ccd9cf67fb9070b1831ed0652f 321 SUPERFAMILY SSF161098 123 305 6.41E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS05480 8ad921ccd9cf67fb9070b1831ed0652f 321 Gene3D G3DSA:1.10.3720.10 121 313 2.0E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS14270 d22ea3129ddcf3bbd5e29c531acc8e5a 282 PIRSF PIRSF007580 4 276 1.5E-63 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS14270 d22ea3129ddcf3bbd5e29c531acc8e5a 282 PANTHER PTHR39456 1 279 7.1E-60 T 22-04-2016 R615_RS14270 d22ea3129ddcf3bbd5e29c531acc8e5a 282 Pfam PF10118 Predicted metal-dependent hydrolase 9 256 1.7E-73 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS14270 d22ea3129ddcf3bbd5e29c531acc8e5a 282 PANTHER PTHR39456:SF2 1 279 7.1E-60 T 22-04-2016 R615_RS08325 1359397f71c09e9ebef1c525e358a4df 289 Gene3D G3DSA:3.40.50.1820 12 268 3.4E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS08325 1359397f71c09e9ebef1c525e358a4df 289 PANTHER PTHR10992:SF909 17 283 2.7E-30 T 22-04-2016 R615_RS08325 1359397f71c09e9ebef1c525e358a4df 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 6.0E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS08325 1359397f71c09e9ebef1c525e358a4df 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 6.0E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS08325 1359397f71c09e9ebef1c525e358a4df 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 6.0E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS08325 1359397f71c09e9ebef1c525e358a4df 289 PANTHER PTHR10992 17 283 2.7E-30 T 22-04-2016 R615_RS08325 1359397f71c09e9ebef1c525e358a4df 289 Pfam PF00561 alpha/beta hydrolase fold 25 126 1.6E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS08325 1359397f71c09e9ebef1c525e358a4df 289 SUPERFAMILY SSF53474 13 267 5.4E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS15415 aab3cfb8f5e7d36392986e4e8bd8016a 345 PANTHER PTHR32332:SF20 266 343 5.1E-108 T 22-04-2016 R615_RS15415 aab3cfb8f5e7d36392986e4e8bd8016a 345 PANTHER PTHR32332:SF20 1 233 5.1E-108 T 22-04-2016 R615_RS15415 aab3cfb8f5e7d36392986e4e8bd8016a 345 PANTHER PTHR32332 266 343 5.1E-108 T 22-04-2016 R615_RS15415 aab3cfb8f5e7d36392986e4e8bd8016a 345 PANTHER PTHR32332 1 233 5.1E-108 T 22-04-2016 R615_RS15415 aab3cfb8f5e7d36392986e4e8bd8016a 345 Pfam PF03060 Nitronate monooxygenase 81 330 2.2E-39 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 R615_RS15415 aab3cfb8f5e7d36392986e4e8bd8016a 345 Gene3D G3DSA:3.20.20.70 1 325 1.2E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS15415 aab3cfb8f5e7d36392986e4e8bd8016a 345 SUPERFAMILY SSF51412 1 337 3.36E-60 T 22-04-2016 R615_RS07875 c1e0b4e412bdf0ee6557b5d24331dd1a 462 Gene3D G3DSA:3.30.70.1230 222 407 4.4E-52 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 R615_RS07875 c1e0b4e412bdf0ee6557b5d24331dd1a 462 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 225 407 7.6E-38 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 R615_RS07875 c1e0b4e412bdf0ee6557b5d24331dd1a 462 PANTHER PTHR11920 143 431 2.1E-83 T 22-04-2016 R615_RS07875 c1e0b4e412bdf0ee6557b5d24331dd1a 462 Pfam PF05230 MASE2 domain 19 106 3.3E-20 T 22-04-2016 IPR007894 MASE2 R615_RS07875 c1e0b4e412bdf0ee6557b5d24331dd1a 462 SUPERFAMILY SSF55073 220 409 2.67E-58 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS07875 c1e0b4e412bdf0ee6557b5d24331dd1a 462 SMART SM00044 186 389 9.6E-26 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 R615_RS07875 c1e0b4e412bdf0ee6557b5d24331dd1a 462 PANTHER PTHR11920:SF341 143 431 2.1E-83 T 22-04-2016 R615_RS12970 7171105cccee2713c99d1574acd58f71 173 PANTHER PTHR30634 10 173 1.6E-25 T 22-04-2016 R615_RS12970 7171105cccee2713c99d1574acd58f71 173 Gene3D G3DSA:2.50.20.10 7 171 1.5E-44 T 22-04-2016 R615_RS12970 7171105cccee2713c99d1574acd58f71 173 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 10 170 3.5E-35 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 R615_RS12970 7171105cccee2713c99d1574acd58f71 173 SUPERFAMILY SSF89392 10 171 3.92E-38 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX R615_RS12970 7171105cccee2713c99d1574acd58f71 173 PANTHER PTHR30634:SF11 10 173 1.6E-25 T 22-04-2016 R615_RS12970 7171105cccee2713c99d1574acd58f71 173 Pfam PF03550 Outer membrane lipoprotein LolB 17 169 7.9E-42 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 R615_RS15380 1a48942162621ee257478f95f6f4e6bc 179 SUPERFAMILY SSF52218 3 170 4.19E-44 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS15380 1a48942162621ee257478f95f6f4e6bc 179 TIGRFAM TIGR01752 flav_long: flavodoxin 4 169 7.3E-61 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 R615_RS15380 1a48942162621ee257478f95f6f4e6bc 179 PIRSF PIRSF038996 1 173 3.7E-59 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 R615_RS15380 1a48942162621ee257478f95f6f4e6bc 179 Pfam PF00258 Flavodoxin 6 161 3.4E-22 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 R615_RS15380 1a48942162621ee257478f95f6f4e6bc 179 PANTHER PTHR19384:SF77 142 169 6.7E-47 T 22-04-2016 R615_RS15380 1a48942162621ee257478f95f6f4e6bc 179 PANTHER PTHR19384:SF77 1 120 6.7E-47 T 22-04-2016 R615_RS15380 1a48942162621ee257478f95f6f4e6bc 179 PANTHER PTHR19384 142 169 6.7E-47 T 22-04-2016 R615_RS15380 1a48942162621ee257478f95f6f4e6bc 179 PANTHER PTHR19384 1 120 6.7E-47 T 22-04-2016 R615_RS15380 1a48942162621ee257478f95f6f4e6bc 179 Gene3D G3DSA:3.40.50.360 1 169 4.2E-52 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS03200 c38e054cb890ac500e3c25132fc04152 279 PANTHER PTHR21057:SF6 5 279 4.7E-198 T 22-04-2016 R615_RS03200 c38e054cb890ac500e3c25132fc04152 279 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 17 271 2.7E-115 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 R615_RS03200 c38e054cb890ac500e3c25132fc04152 279 Pfam PF00793 DAHP synthetase I family 8 271 1.6E-68 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 R615_RS03200 c38e054cb890ac500e3c25132fc04152 279 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 12 273 48.802 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 R615_RS03200 c38e054cb890ac500e3c25132fc04152 279 SUPERFAMILY SSF51569 4 275 1.56E-101 T 22-04-2016 R615_RS03200 c38e054cb890ac500e3c25132fc04152 279 Gene3D G3DSA:3.20.20.70 16 274 6.6E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS03200 c38e054cb890ac500e3c25132fc04152 279 PANTHER PTHR21057 5 279 4.7E-198 T 22-04-2016 R615_RS04585 ae0820a84ec8469bc2863796aaf34c78 244 Pfam PF07317 Flagellar regulator YcgR 9 112 3.7E-11 T 22-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal R615_RS04585 ae0820a84ec8469bc2863796aaf34c78 244 Pfam PF07238 PilZ domain 116 226 7.3E-9 T 22-04-2016 IPR009875 PilZ domain GO:0035438 R615_RS04585 ae0820a84ec8469bc2863796aaf34c78 244 Gene3D G3DSA:2.40.10.220 117 234 9.1E-23 T 22-04-2016 R615_RS04585 ae0820a84ec8469bc2863796aaf34c78 244 Gene3D G3DSA:2.30.110.10 9 116 2.9E-16 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 R615_RS14150 f406c1ff40863039a6c4d0af34757e02 426 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 37.866 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 R615_RS14150 f406c1ff40863039a6c4d0af34757e02 426 Pfam PF04285 Protein of unknown function (DUF444) 4 419 7.5E-178 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 R615_RS14150 f406c1ff40863039a6c4d0af34757e02 426 PANTHER PTHR30510 1 426 3.4E-157 T 22-04-2016 R615_RS15930 81b574e4318efe5c007c563f22a56783 144 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-14 T 22-04-2016 R615_RS15930 81b574e4318efe5c007c563f22a56783 144 PANTHER PTHR11661 1 142 6.6E-71 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 R615_RS15930 81b574e4318efe5c007c563f22a56783 144 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 6.3E-23 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 R615_RS15930 81b574e4318efe5c007c563f22a56783 144 SMART SM00649 9 141 1.7E-82 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 R615_RS15930 81b574e4318efe5c007c563f22a56783 144 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 7.1E-65 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 R615_RS15930 81b574e4318efe5c007c563f22a56783 144 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 5.1E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal R615_RS15930 81b574e4318efe5c007c563f22a56783 144 Gene3D G3DSA:1.10.10.250 73 141 4.4E-30 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 R615_RS15930 81b574e4318efe5c007c563f22a56783 144 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.304 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 R615_RS15930 81b574e4318efe5c007c563f22a56783 144 Gene3D G3DSA:3.30.1550.10 2 72 9.9E-38 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal R615_RS15930 81b574e4318efe5c007c563f22a56783 144 SUPERFAMILY SSF54747 3 73 5.1E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal R615_RS15930 81b574e4318efe5c007c563f22a56783 144 SUPERFAMILY SSF46906 68 141 1.44E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 SUPERFAMILY SSF52540 417 551 3.2E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 SUPERFAMILY SSF52540 294 344 3.2E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 SMART SM00487 162 382 5.6E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 Gene3D G3DSA:3.40.50.300 294 357 5.8E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 Gene3D G3DSA:3.40.50.300 165 247 5.8E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 SUPERFAMILY SSF52540 152 384 2.21E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 Pfam PF04851 Type III restriction enzyme, res subunit 166 347 1.6E-43 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 PANTHER PTHR30195:SF3 1 568 7.7E-59 T 22-04-2016 R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 Pfam PF08463 EcoEI R protein C-terminal 676 835 3.3E-24 T 22-04-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 Gene3D G3DSA:3.40.50.300 425 552 1.5E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 Pfam PF00271 Helicase conserved C-terminal domain 433 547 1.9E-6 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 PANTHER PTHR30195 1 568 7.7E-59 T 22-04-2016 R615_RS04550 c2c9b72a5560af2429267468e38c9c91 840 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 31 112 8.1E-10 T 22-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain R615_RS12685 64a8ebb2d30cdb138c16208a0cd7c89b 436 SUPERFAMILY SSF53335 164 434 5.88E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12685 64a8ebb2d30cdb138c16208a0cd7c89b 436 PANTHER PTHR22807 164 414 1.2E-58 T 22-04-2016 R615_RS12685 64a8ebb2d30cdb138c16208a0cd7c89b 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 330 342 5.5E-18 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS12685 64a8ebb2d30cdb138c16208a0cd7c89b 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 417 434 5.5E-18 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS12685 64a8ebb2d30cdb138c16208a0cd7c89b 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 258 268 5.5E-18 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS12685 64a8ebb2d30cdb138c16208a0cd7c89b 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 229 243 5.5E-18 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS12685 64a8ebb2d30cdb138c16208a0cd7c89b 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 380 396 5.5E-18 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS12685 64a8ebb2d30cdb138c16208a0cd7c89b 436 Gene3D G3DSA:3.40.50.150 240 434 7.3E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12685 64a8ebb2d30cdb138c16208a0cd7c89b 436 Pfam PF01189 16S rRNA methyltransferase RsmB/F 249 422 2.4E-39 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS04975 ccb7216ba76a09af148ccfa6dd0aaad6 368 Pfam PF02108 Flagellar assembly protein FliH 137 260 5.2E-19 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE R615_RS04975 ccb7216ba76a09af148ccfa6dd0aaad6 368 PANTHER PTHR34982 1 283 3.8E-19 T 22-04-2016 R615_RS04975 ccb7216ba76a09af148ccfa6dd0aaad6 368 PANTHER PTHR34982:SF1 1 283 3.8E-19 T 22-04-2016 R615_RS09110 4be24b548a90ba37563d5529a74d91cf 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 56 16.161 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 R615_RS09110 4be24b548a90ba37563d5529a74d91cf 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 57 2.1E-17 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 R615_RS09110 4be24b548a90ba37563d5529a74d91cf 61 PANTHER PTHR35534 1 57 2.6E-24 T 22-04-2016 R615_RS09110 4be24b548a90ba37563d5529a74d91cf 61 Pfam PF01783 Ribosomal L32p protein family 2 57 1.6E-18 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 R615_RS09110 4be24b548a90ba37563d5529a74d91cf 61 SUPERFAMILY SSF57829 2 57 7.94E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 489 669 9.3E-24 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 SUPERFAMILY SSF53335 410 710 2.11E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 Pfam PF02926 THUMP domain 40 160 1.4E-12 T 22-04-2016 IPR004114 THUMP domain GO:0003723 R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 SUPERFAMILY SSF53335 269 387 1.1E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 SUPERFAMILY SSF53335 151 228 1.1E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 PANTHER PTHR18895 416 699 1.9E-101 T 22-04-2016 R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 Pfam PF01170 Putative RNA methylase family UPF0020 169 384 2.1E-44 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 PANTHER PTHR18895:SF62 416 699 1.9E-101 T 22-04-2016 R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 SMART SM00981 64 161 5.7E-16 T 22-04-2016 IPR004114 THUMP domain GO:0003723 R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 Gene3D G3DSA:3.40.50.150 266 385 3.0E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 Gene3D G3DSA:3.40.50.150 156 225 3.0E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 Gene3D G3DSA:3.40.50.150 447 711 1.6E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 206 217 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 12 713 30.214 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 PIRSF PIRSF037618 7 713 2.7E-287 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS11195 327fb121d8513bd0e2dedee107363c3c 713 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 318 324 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 R615_RS15665 038c518fe8b5a9a4ba029fe917f6d94f 238 Pfam PF10099 Anti-sigma-K factor rskA 62 223 3.9E-19 T 22-04-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 PIRSF PIRSF000157 1 938 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 Pfam PF00676 Dehydrogenase E1 component 223 521 7.4E-55 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 4.6E-64 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 PANTHER PTHR23152:SF4 1 938 0.0 T 22-04-2016 R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 Gene3D G3DSA:3.40.50.970 162 536 1.6E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 SMART SM00861 594 787 1.5E-56 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 Gene3D G3DSA:3.40.50.970 594 796 3.8E-25 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 7 45 6.7E-16 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 936 4.5E-51 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 SUPERFAMILY SSF52518 576 794 1.08E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 10 936 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 PANTHER PTHR23152 1 938 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 R615_RS09790 2196cf3d5dd943c3ca644f02354a9711 940 SUPERFAMILY SSF52518 120 545 5.81E-84 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 Gene3D G3DSA:1.20.970.10 99 162 2.9E-12 T 22-04-2016 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 SUPERFAMILY SSF52418 169 411 4.45E-66 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 Gene3D G3DSA:3.90.1170.30 417 495 1.9E-13 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 SMART SM00941 431 498 2.3E-17 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 Pfam PF00591 Glycosyl transferase family, a/b domain 170 398 1.4E-8 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 204 219 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 431 491 1.4E-9 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 SUPERFAMILY SSF47648 98 163 6.28E-12 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 Hamap MF_00703 Putative thymidine phosphorylase. 9 502 57.942 T 22-04-2016 IPR028579 Putative thymidine phosphorylase KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 PANTHER PTHR10515:SF0 71 503 7.4E-123 T 22-04-2016 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 PANTHER PTHR10515 71 503 7.4E-123 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 TIGRFAM TIGR02645 ARCH_P_rylase: putative thymidine phosphorylase 8 490 4.1E-177 T 22-04-2016 IPR013466 Thymidine phosphorylase/AMP phosphorylase GO:0016763 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 SUPERFAMILY SSF54680 418 495 2.75E-14 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 Gene3D G3DSA:3.40.1030.10 166 413 2.5E-70 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 R615_RS04000 793f42bf361cc3af41f537f6722b8600 505 Pfam PF02885 Glycosyl transferase family, helical bundle domain 105 161 5.1E-9 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain R615_RS11790 6aaa7af9348177fe842b0be828da9bb0 173 Gene3D G3DSA:3.40.30.10 12 164 3.8E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11790 6aaa7af9348177fe842b0be828da9bb0 173 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 R615_RS11790 6aaa7af9348177fe842b0be828da9bb0 173 SUPERFAMILY SSF52833 42 164 9.09E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11790 6aaa7af9348177fe842b0be828da9bb0 173 Pfam PF08534 Redoxin 40 159 4.2E-20 T 22-04-2016 IPR013740 Redoxin GO:0016491 R615_RS11790 6aaa7af9348177fe842b0be828da9bb0 173 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 164 6.1E-55 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 R615_RS11790 6aaa7af9348177fe842b0be828da9bb0 173 PANTHER PTHR10681 1 163 6.5E-55 T 22-04-2016 R615_RS11790 6aaa7af9348177fe842b0be828da9bb0 173 PANTHER PTHR10681:SF107 1 163 6.5E-55 T 22-04-2016 R615_RS16680 9cf92ec96ed4a801d427ebafd3ed1465 187 PANTHER PTHR11839 3 178 1.4E-67 T 22-04-2016 R615_RS16680 9cf92ec96ed4a801d427ebafd3ed1465 187 SUPERFAMILY SSF55811 5 177 4.06E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS16680 9cf92ec96ed4a801d427ebafd3ed1465 187 Pfam PF00293 NUDIX domain 46 162 1.8E-9 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 R615_RS16680 9cf92ec96ed4a801d427ebafd3ed1465 187 PANTHER PTHR11839:SF12 3 178 1.4E-67 T 22-04-2016 R615_RS16680 9cf92ec96ed4a801d427ebafd3ed1465 187 Gene3D G3DSA:3.90.79.10 4 174 2.1E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS16680 9cf92ec96ed4a801d427ebafd3ed1465 187 ProSitePatterns PS00893 Nudix box signature. 78 99 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 R615_RS00805 2981df57fd7c12c55f93f2a85306be42 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.1E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS00805 2981df57fd7c12c55f93f2a85306be42 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.1E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS00805 2981df57fd7c12c55f93f2a85306be42 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.1E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS00805 2981df57fd7c12c55f93f2a85306be42 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 R615_RS00805 2981df57fd7c12c55f93f2a85306be42 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 3.5E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS00805 2981df57fd7c12c55f93f2a85306be42 90 PANTHER PTHR33175 1 89 1.6E-38 T 22-04-2016 R615_RS00805 2981df57fd7c12c55f93f2a85306be42 90 SMART SM00411 1 90 1.3E-36 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 R615_RS00805 2981df57fd7c12c55f93f2a85306be42 90 Gene3D G3DSA:4.10.520.10 1 90 3.6E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 R615_RS00805 2981df57fd7c12c55f93f2a85306be42 90 SUPERFAMILY SSF47729 1 90 8.39E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 R615_RS16935 3e07ee4a84a6b664d59255e971ae39ae 481 SUPERFAMILY SSF56801 8 479 4.58E-62 T 22-04-2016 R615_RS16935 3e07ee4a84a6b664d59255e971ae39ae 481 Pfam PF00501 AMP-binding enzyme 13 384 1.3E-33 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 R615_RS16935 3e07ee4a84a6b664d59255e971ae39ae 481 ProSitePatterns PS00455 Putative AMP-binding domain signature. 144 155 - T 22-04-2016 IPR020845 AMP-binding, conserved site R615_RS16935 3e07ee4a84a6b664d59255e971ae39ae 481 PANTHER PTHR24095 144 480 9.0E-33 T 22-04-2016 R615_RS16935 3e07ee4a84a6b664d59255e971ae39ae 481 Gene3D G3DSA:3.30.300.30 380 477 9.6E-10 T 22-04-2016 R615_RS16935 3e07ee4a84a6b664d59255e971ae39ae 481 Gene3D G3DSA:3.40.50.980 153 297 2.3E-14 T 22-04-2016 R615_RS16935 3e07ee4a84a6b664d59255e971ae39ae 481 Gene3D G3DSA:3.40.50.980 9 152 3.6E-9 T 22-04-2016 R615_RS16935 3e07ee4a84a6b664d59255e971ae39ae 481 Gene3D G3DSA:2.30.38.10 308 378 5.0E-14 T 22-04-2016 R615_RS16935 3e07ee4a84a6b664d59255e971ae39ae 481 PANTHER PTHR24095:SF181 144 480 9.0E-33 T 22-04-2016 R615_RS01580 fba93d49c9a6ea04f765dc597a74b365 209 Gene3D G3DSA:1.10.10.640 173 206 1.4E-20 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical R615_RS01580 fba93d49c9a6ea04f765dc597a74b365 209 Gene3D G3DSA:1.10.10.640 72 112 1.4E-20 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical R615_RS01580 fba93d49c9a6ea04f765dc597a74b365 209 Pfam PF05494 MlaC protein 35 198 2.2E-43 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC R615_RS01580 fba93d49c9a6ea04f765dc597a74b365 209 PIRSF PIRSF004649 1 209 1.2E-41 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC R615_RS01580 fba93d49c9a6ea04f765dc597a74b365 209 PANTHER PTHR36573 1 209 2.1E-31 T 22-04-2016 R615_RS01580 fba93d49c9a6ea04f765dc597a74b365 209 Gene3D G3DSA:3.10.450.50 115 172 2.6E-13 T 22-04-2016 IPR032710 NTF2-like domain R615_RS01580 fba93d49c9a6ea04f765dc597a74b365 209 Gene3D G3DSA:3.10.450.50 28 71 2.6E-13 T 22-04-2016 IPR032710 NTF2-like domain R615_RS05950 29ad1f6aa18d1a1c97d463801d27cd73 391 PANTHER PTHR23522:SF3 1 385 2.2E-86 T 22-04-2016 R615_RS05950 29ad1f6aa18d1a1c97d463801d27cd73 391 PIRSF PIRSF004925 2 391 3.9E-102 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter R615_RS05950 29ad1f6aa18d1a1c97d463801d27cd73 391 Gene3D G3DSA:1.20.1250.20 13 183 2.0E-12 T 22-04-2016 R615_RS05950 29ad1f6aa18d1a1c97d463801d27cd73 391 Gene3D G3DSA:1.20.1250.20 196 386 4.1E-29 T 22-04-2016 R615_RS05950 29ad1f6aa18d1a1c97d463801d27cd73 391 Pfam PF12832 MFS_1 like family 11 363 6.2E-76 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain R615_RS05950 29ad1f6aa18d1a1c97d463801d27cd73 391 SUPERFAMILY SSF103473 12 383 6.02E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS05950 29ad1f6aa18d1a1c97d463801d27cd73 391 PANTHER PTHR23522 1 385 2.2E-86 T 22-04-2016 R615_RS08880 ee7cf0a99285919acffe74c518c99b6b 412 PANTHER PTHR33295:SF5 4 412 2.1E-113 T 22-04-2016 R615_RS08880 ee7cf0a99285919acffe74c518c99b6b 412 PANTHER PTHR33295 4 412 2.1E-113 T 22-04-2016 R615_RS08880 ee7cf0a99285919acffe74c518c99b6b 412 SUPERFAMILY SSF52540 10 207 2.66E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08880 ee7cf0a99285919acffe74c518c99b6b 412 Pfam PF13173 AAA domain 18 139 7.6E-24 T 22-04-2016 R615_RS08880 ee7cf0a99285919acffe74c518c99b6b 412 Gene3D G3DSA:3.40.50.300 11 127 2.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08880 ee7cf0a99285919acffe74c518c99b6b 412 Pfam PF13635 Domain of unknown function (DUF4143) 201 360 4.1E-29 T 22-04-2016 IPR025420 Domain of unknown function DUF4143 R615_RS12780 8ec211e2c514b68e0afb4182597dfbd9 120 Pfam PF01292 Prokaryotic cytochrome b561 11 118 9.6E-14 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 R615_RS12780 8ec211e2c514b68e0afb4182597dfbd9 120 Gene3D G3DSA:1.20.950.20 21 119 1.8E-5 T 22-04-2016 R615_RS12780 8ec211e2c514b68e0afb4182597dfbd9 120 SUPERFAMILY SSF81342 19 120 8.37E-17 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 R615_RS06570 da7b934383cf17d35857e812fb090386 334 SUPERFAMILY SSF55681 92 334 4.75E-79 T 22-04-2016 R615_RS06570 da7b934383cf17d35857e812fb090386 334 Gene3D G3DSA:3.30.930.10 9 334 5.1E-134 T 22-04-2016 R615_RS06570 da7b934383cf17d35857e812fb090386 334 Pfam PF01409 tRNA synthetases class II core domain (F) 92 333 2.7E-107 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 R615_RS06570 da7b934383cf17d35857e812fb090386 334 SUPERFAMILY SSF46589 13 99 3.35E-23 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 R615_RS06570 da7b934383cf17d35857e812fb090386 334 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 87 1.1E-26 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 R615_RS06570 da7b934383cf17d35857e812fb090386 334 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 333 1.3E-108 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 R615_RS06570 da7b934383cf17d35857e812fb090386 334 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 333 48.957 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 R615_RS06570 da7b934383cf17d35857e812fb090386 334 PANTHER PTHR11538 90 334 5.8E-110 T 22-04-2016 R615_RS06570 da7b934383cf17d35857e812fb090386 334 PANTHER PTHR11538 39 52 5.8E-110 T 22-04-2016 R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 457 7.7E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 457 477 7.7E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 SUPERFAMILY SSF52172 3 191 1.61E-8 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 PANTHER PTHR32071:SF36 1 484 5.8E-225 T 22-04-2016 R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 Gene3D G3DSA:1.10.10.60 428 476 1.6E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 Gene3D G3DSA:3.40.50.2300 3 122 9.2E-4 T 22-04-2016 R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 Gene3D G3DSA:3.40.50.300 143 318 3.4E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 PANTHER PTHR32071 1 484 5.8E-225 T 22-04-2016 R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 SUPERFAMILY SSF46689 426 476 2.33E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 Pfam PF06490 Flagellar regulatory protein FleQ 6 123 8.9E-27 T 22-04-2016 IPR010518 Flagellar regulatory FleQ R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 SMART SM00382 166 310 1.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 Gene3D G3DSA:1.10.8.60 319 392 1.4E-18 T 22-04-2016 R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 SUPERFAMILY SSF52540 146 387 1.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 Pfam PF02954 Bacterial regulatory protein, Fis family 434 474 7.7E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS04940 cb994d5ddee585285c925a51d37abcef 484 Pfam PF00158 Sigma-54 interaction domain 146 312 8.3E-74 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 R615_RS10575 51d50bdc09e8980eb3982051d1234e80 187 SUPERFAMILY SSF53271 18 185 5.11E-41 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS10575 51d50bdc09e8980eb3982051d1234e80 187 PANTHER PTHR22573 8 182 1.3E-37 T 22-04-2016 R615_RS10575 51d50bdc09e8980eb3982051d1234e80 187 PANTHER PTHR22573:SF56 8 182 1.3E-37 T 22-04-2016 R615_RS10575 51d50bdc09e8980eb3982051d1234e80 187 Pfam PF00156 Phosphoribosyl transferase domain 20 169 5.7E-21 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 R615_RS10575 51d50bdc09e8980eb3982051d1234e80 187 Gene3D G3DSA:3.40.50.2020 8 185 4.7E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS03225 d71828e944a450914e75dee8b0b6aa09 170 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 13 168 16.453 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 R615_RS03225 d71828e944a450914e75dee8b0b6aa09 170 ProSitePatterns PS00855 Signal peptidases II signature. 110 122 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 R615_RS03225 d71828e944a450914e75dee8b0b6aa09 170 TIGRFAM TIGR00077 lspA: signal peptidase II 13 168 2.9E-38 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 R615_RS03225 d71828e944a450914e75dee8b0b6aa09 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 107 122 8.2E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 R615_RS03225 d71828e944a450914e75dee8b0b6aa09 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 143 159 8.2E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 R615_RS03225 d71828e944a450914e75dee8b0b6aa09 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 59 67 8.2E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 R615_RS03225 d71828e944a450914e75dee8b0b6aa09 170 PANTHER PTHR33695:SF1 9 164 3.1E-54 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 R615_RS03225 d71828e944a450914e75dee8b0b6aa09 170 Pfam PF01252 Signal peptidase (SPase) II 22 162 2.4E-35 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 R615_RS03225 d71828e944a450914e75dee8b0b6aa09 170 PANTHER PTHR33695 9 164 3.1E-54 T 22-04-2016 R615_RS15735 5f6849ee18473b7c47abb6a4bed47c57 160 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 149 1.3E-23 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component R615_RS15735 5f6849ee18473b7c47abb6a4bed47c57 160 PANTHER PTHR35011 1 147 1.2E-18 T 22-04-2016 R615_RS08135 5c712ea7e143e525d8d727582e87d35c 370 Pfam PF07995 Glucose / Sorbosone dehydrogenase 41 366 1.2E-103 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 R615_RS08135 5c712ea7e143e525d8d727582e87d35c 370 SUPERFAMILY SSF50952 35 364 2.48E-27 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 R615_RS08135 5c712ea7e143e525d8d727582e87d35c 370 Gene3D G3DSA:2.120.10.30 35 369 1.1E-73 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like R615_RS08135 5c712ea7e143e525d8d727582e87d35c 370 PANTHER PTHR19328 36 259 1.1E-37 T 22-04-2016 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 3 557 50.38 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 SUPERFAMILY SSF50715 346 556 1.73E-60 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 PANTHER PTHR11451 6 253 1.1E-203 T 22-04-2016 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 PANTHER PTHR11451 273 558 1.1E-203 T 22-04-2016 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 Gene3D G3DSA:3.90.800.10 107 215 2.5E-47 T 22-04-2016 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 Gene3D G3DSA:2.40.240.10 354 468 1.6E-33 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 Gene3D G3DSA:1.10.1160.10 269 344 3.0E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 PANTHER PTHR11451:SF29 6 253 1.1E-203 T 22-04-2016 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 PANTHER PTHR11451:SF29 273 558 1.1E-203 T 22-04-2016 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 SUPERFAMILY SSF52374 17 343 9.19E-99 T 22-04-2016 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 34 556 4.6E-223 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 Gene3D G3DSA:3.40.50.620 33 102 1.8E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 Gene3D G3DSA:3.40.50.620 218 268 1.8E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 PRINTS PR00987 Glutamyl-tRNA synthetase signature 66 79 1.4E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 PRINTS PR00987 Glutamyl-tRNA synthetase signature 51 62 1.4E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 226 1.4E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 49 1.4E-8 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 Gene3D G3DSA:2.40.240.10 469 555 2.6E-30 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 33 340 5.2E-108 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS08090 a7db3ad681530e572a1404901c74a6f6 562 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 346 536 6.0E-48 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 R615_RS02470 26e0da5908f7c8093823a238265c46d2 388 Gene3D G3DSA:3.30.930.10 20 323 4.9E-59 T 22-04-2016 R615_RS02470 26e0da5908f7c8093823a238265c46d2 388 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 376 28.047 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 R615_RS02470 26e0da5908f7c8093823a238265c46d2 388 PANTHER PTHR11476 10 365 9.1E-51 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 R615_RS02470 26e0da5908f7c8093823a238265c46d2 388 PIRSF PIRSF001549 7 379 2.7E-41 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 R615_RS02470 26e0da5908f7c8093823a238265c46d2 388 Pfam PF13393 Histidyl-tRNA synthetase 12 323 2.5E-108 T 22-04-2016 R615_RS02470 26e0da5908f7c8093823a238265c46d2 388 PANTHER PTHR11476:SF5 10 365 9.1E-51 T 22-04-2016 R615_RS02470 26e0da5908f7c8093823a238265c46d2 388 SUPERFAMILY SSF55681 7 324 3.08E-53 T 22-04-2016 R615_RS02405 6b4f9cc829aa678c74327d9b9c347bca 342 PANTHER PTHR32120 3 341 6.3E-130 T 22-04-2016 R615_RS02405 6b4f9cc829aa678c74327d9b9c347bca 342 Gene3D G3DSA:3.40.50.300 118 278 5.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02405 6b4f9cc829aa678c74327d9b9c347bca 342 Pfam PF03193 Protein of unknown function, DUF258 104 279 9.7E-53 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 R615_RS02405 6b4f9cc829aa678c74327d9b9c347bca 342 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 79 336 1.1E-77 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 R615_RS02405 6b4f9cc829aa678c74327d9b9c347bca 342 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 45 342 35.642 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 R615_RS02405 6b4f9cc829aa678c74327d9b9c347bca 342 Gene3D G3DSA:2.40.50.140 45 103 4.4E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS02405 6b4f9cc829aa678c74327d9b9c347bca 342 SUPERFAMILY SSF52540 117 337 1.46E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02405 6b4f9cc829aa678c74327d9b9c347bca 342 Gene3D G3DSA:1.10.40.50 279 340 1.2E-21 T 22-04-2016 R615_RS02405 6b4f9cc829aa678c74327d9b9c347bca 342 PANTHER PTHR32120:SF2 3 341 6.3E-130 T 22-04-2016 R615_RS05520 244236f63ea84693b482a7bde62fb9fd 397 SUPERFAMILY SSF53383 3 390 4.89E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS05520 244236f63ea84693b482a7bde62fb9fd 397 PANTHER PTHR11751:SF302 13 393 2.0E-232 T 22-04-2016 R615_RS05520 244236f63ea84693b482a7bde62fb9fd 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 R615_RS05520 244236f63ea84693b482a7bde62fb9fd 397 Gene3D G3DSA:3.90.1150.10 259 391 6.4E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS05520 244236f63ea84693b482a7bde62fb9fd 397 Pfam PF00155 Aminotransferase class I and II 32 375 4.3E-62 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 R615_RS05520 244236f63ea84693b482a7bde62fb9fd 397 Gene3D G3DSA:3.40.640.10 45 258 6.7E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS05520 244236f63ea84693b482a7bde62fb9fd 397 PANTHER PTHR11751 13 393 2.0E-232 T 22-04-2016 R615_RS05975 24ad3990e565bc5f33605b1f008bb414 77 Gene3D G3DSA:1.10.10.610 2 72 4.5E-26 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 R615_RS05975 24ad3990e565bc5f33605b1f008bb414 77 SUPERFAMILY SSF118001 2 69 2.09E-23 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 R615_RS05975 24ad3990e565bc5f33605b1f008bb414 77 Pfam PF06794 Uncharacterised protein family (UPF0270) 2 65 1.8E-25 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 R615_RS05975 24ad3990e565bc5f33605b1f008bb414 77 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 1.0E-11 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 R615_RS01035 674435cea82f806abb6efcaedcc07925 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 82 22.674 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 R615_RS01035 674435cea82f806abb6efcaedcc07925 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 49 1.5E-21 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 R615_RS01035 674435cea82f806abb6efcaedcc07925 82 PANTHER PTHR33162:SF2 1 49 1.5E-15 T 22-04-2016 R615_RS01035 674435cea82f806abb6efcaedcc07925 82 PANTHER PTHR33162 1 49 1.5E-15 T 22-04-2016 R615_RS01035 674435cea82f806abb6efcaedcc07925 82 Pfam PF02416 mttA/Hcf106 family 5 54 3.1E-14 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 R615_RS03925 1c35ebefd7902ec47f217e91e8a65257 132 PANTHER PTHR34182 2 128 4.3E-27 T 22-04-2016 R615_RS03925 1c35ebefd7902ec47f217e91e8a65257 132 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 7.7E-40 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 R615_RS03925 1c35ebefd7902ec47f217e91e8a65257 132 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 7.7E-40 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 R615_RS03925 1c35ebefd7902ec47f217e91e8a65257 132 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 7.7E-40 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 R615_RS03925 1c35ebefd7902ec47f217e91e8a65257 132 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 7.7E-40 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 R615_RS03925 1c35ebefd7902ec47f217e91e8a65257 132 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 8.6E-26 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 R615_RS03925 1c35ebefd7902ec47f217e91e8a65257 132 Pfam PF03840 Preprotein translocase SecG subunit 4 72 1.4E-20 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 R615_RS12680 9bbb919aa067901b0b03df1f54192de0 347 SMART SM00342 254 336 3.4E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS12680 9bbb919aa067901b0b03df1f54192de0 347 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 208 8.0E-15 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS12680 9bbb919aa067901b0b03df1f54192de0 347 Gene3D G3DSA:1.10.10.60 289 343 3.2E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS12680 9bbb919aa067901b0b03df1f54192de0 347 Pfam PF12833 Helix-turn-helix domain 261 337 4.6E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS12680 9bbb919aa067901b0b03df1f54192de0 347 PANTHER PTHR11019 234 344 1.5E-30 T 22-04-2016 R615_RS12680 9bbb919aa067901b0b03df1f54192de0 347 PANTHER PTHR11019:SF52 234 344 1.5E-30 T 22-04-2016 R615_RS12680 9bbb919aa067901b0b03df1f54192de0 347 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 320 8.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS12680 9bbb919aa067901b0b03df1f54192de0 347 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 320 336 8.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS12680 9bbb919aa067901b0b03df1f54192de0 347 SUPERFAMILY SSF46689 289 341 1.39E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 PANTHER PTHR32432 1 407 6.1E-173 T 22-04-2016 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 SUPERFAMILY SSF53067 198 377 3.02E-52 T 22-04-2016 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 Gene3D G3DSA:3.30.420.40 298 351 2.8E-35 T 22-04-2016 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 Gene3D G3DSA:3.30.420.40 210 234 2.8E-35 T 22-04-2016 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 Gene3D G3DSA:3.30.1490.110 87 157 1.4E-19 T 22-04-2016 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 SUPERFAMILY SSF53067 8 197 1.86E-64 T 22-04-2016 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 SMART SM00842 10 196 3.2E-107 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 PIRSF PIRSF003101 1 411 6.3E-164 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 Pfam PF14450 Cell division protein FtsA 11 193 2.1E-13 T 22-04-2016 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 Pfam PF14450 Cell division protein FtsA 207 374 6.6E-27 T 22-04-2016 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 PANTHER PTHR32432:SF4 1 407 6.1E-173 T 22-04-2016 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 Gene3D G3DSA:3.30.420.40 158 209 5.9E-27 T 22-04-2016 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 Gene3D G3DSA:3.30.420.40 5 83 5.9E-27 T 22-04-2016 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 32.312 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 10 377 4.0E-162 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 Gene3D G3DSA:3.90.640.10 235 297 1.2E-20 T 22-04-2016 R615_RS13095 3f8e75e616058a5c36fd4f0a194c8c8f 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 2.6E-34 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 R615_RS14470 07e3aa04c243725a22790e7d8f236b78 308 PANTHER PTHR39456 13 294 3.9E-85 T 22-04-2016 R615_RS14470 07e3aa04c243725a22790e7d8f236b78 308 Pfam PF10118 Predicted metal-dependent hydrolase 26 272 7.1E-88 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS14470 07e3aa04c243725a22790e7d8f236b78 308 PIRSF PIRSF007580 10 289 1.5E-80 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS14470 07e3aa04c243725a22790e7d8f236b78 308 PANTHER PTHR39456:SF2 13 294 3.9E-85 T 22-04-2016 R615_RS14010 7fc33d54ac6c9d940c61ff45e3e7f0ac 223 SMART SM00028 145 178 420.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS14010 7fc33d54ac6c9d940c61ff45e3e7f0ac 223 SMART SM00028 179 212 9.1E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS14010 7fc33d54ac6c9d940c61ff45e3e7f0ac 223 Gene3D G3DSA:1.25.40.10 152 221 5.1E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS14010 7fc33d54ac6c9d940c61ff45e3e7f0ac 223 SUPERFAMILY SSF48452 148 222 5.27E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS14010 7fc33d54ac6c9d940c61ff45e3e7f0ac 223 Pfam PF07719 Tetratricopeptide repeat 179 211 7.0E-6 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 R615_RS08925 9183f2b54c505709256ed5a1a9ea8286 313 PANTHER PTHR30097 38 313 8.0E-47 T 22-04-2016 R615_RS08925 9183f2b54c505709256ed5a1a9ea8286 313 Gene3D G3DSA:2.40.50.100 81 153 2.9E-10 T 22-04-2016 R615_RS08925 9183f2b54c505709256ed5a1a9ea8286 313 SUPERFAMILY SSF111369 80 233 5.89E-12 T 22-04-2016 R615_RS08925 9183f2b54c505709256ed5a1a9ea8286 313 PANTHER PTHR30097:SF4 38 313 8.0E-47 T 22-04-2016 R615_RS08925 9183f2b54c505709256ed5a1a9ea8286 313 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 122 228 1.4E-18 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain R615_RS02540 ff7afa60577986a755e50ab96f7b81a5 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.3E-47 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 R615_RS02540 ff7afa60577986a755e50ab96f7b81a5 126 PANTHER PTHR21012:SF0 2 126 2.8E-61 T 22-04-2016 R615_RS02540 ff7afa60577986a755e50ab96f7b81a5 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 7.6E-46 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 R615_RS02540 ff7afa60577986a755e50ab96f7b81a5 126 Gene3D G3DSA:2.40.40.20 1 123 4.9E-51 T 22-04-2016 R615_RS02540 ff7afa60577986a755e50ab96f7b81a5 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 6.0E-47 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 R615_RS02540 ff7afa60577986a755e50ab96f7b81a5 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 66.897 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 R615_RS02540 ff7afa60577986a755e50ab96f7b81a5 126 PIRSF PIRSF006246 1 125 2.6E-50 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 R615_RS02540 ff7afa60577986a755e50ab96f7b81a5 126 SUPERFAMILY SSF50692 1 116 2.24E-47 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain R615_RS02540 ff7afa60577986a755e50ab96f7b81a5 126 PANTHER PTHR21012 2 126 2.8E-61 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 PIRSF PIRSF002560 1 156 2.6E-62 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 Gene3D G3DSA:1.20.1260.10 1 155 2.3E-56 T 22-04-2016 IPR012347 Ferritin-related R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 SUPERFAMILY SSF47240 1 155 2.5E-47 T 22-04-2016 IPR009078 Ferritin-like superfamily R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 PANTHER PTHR30295:SF9 1 155 3.4E-82 T 22-04-2016 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 3.2E-48 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 PANTHER PTHR30295 1 155 3.4E-82 T 22-04-2016 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 Pfam PF00210 Ferritin-like domain 8 144 2.1E-38 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 PRINTS PR00601 Bacterioferritin signature 3 22 6.4E-46 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 PRINTS PR00601 Bacterioferritin signature 86 106 6.4E-46 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 PRINTS PR00601 Bacterioferritin signature 107 127 6.4E-46 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 PRINTS PR00601 Bacterioferritin signature 44 64 6.4E-46 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 PRINTS PR00601 Bacterioferritin signature 129 150 6.4E-46 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 PRINTS PR00601 Bacterioferritin signature 23 43 6.4E-46 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 PRINTS PR00601 Bacterioferritin signature 65 85 6.4E-46 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS12205 38de5e966ae746cb6b2f6e78132baeb3 156 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 SUPERFAMILY SSF53738 627 734 1.61E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 PANTHER PTHR22573 359 831 4.6E-159 T 22-04-2016 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 Gene3D G3DSA:3.30.310.50 740 823 5.3E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 SUPERFAMILY SSF53738 379 511 1.41E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 Gene3D G3DSA:3.40.120.10 379 506 1.4E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 470 479 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 381 510 7.5E-26 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 SUPERFAMILY SSF53738 524 625 5.89E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 764 819 2.8E-6 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 Gene3D G3DSA:3.40.120.10 620 737 1.9E-39 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 574 587 5.1E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 603 618 5.1E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 540 559 5.1E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 469 483 5.1E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 SUPERFAMILY SSF55957 737 829 1.23E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 PANTHER PTHR22573:SF28 359 831 4.6E-159 T 22-04-2016 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 628 737 4.3E-19 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 Gene3D G3DSA:3.40.120.10 542 619 1.3E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS00915 e894db4fb0224d2c5ccb65cd00e24107 832 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 526 623 3.6E-26 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 R615_RS05505 e1952e6395e52585b9e9facea86af67a 311 Gene3D G3DSA:3.40.190.10 183 261 5.7E-6 T 22-04-2016 R615_RS05505 e1952e6395e52585b9e9facea86af67a 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.2E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS05505 e1952e6395e52585b9e9facea86af67a 311 Gene3D G3DSA:3.40.190.10 108 182 6.5E-7 T 22-04-2016 R615_RS05505 e1952e6395e52585b9e9facea86af67a 311 PANTHER PTHR30126 3 304 4.6E-88 T 22-04-2016 R615_RS05505 e1952e6395e52585b9e9facea86af67a 311 PANTHER PTHR30126:SF19 3 304 4.6E-88 T 22-04-2016 R615_RS05505 e1952e6395e52585b9e9facea86af67a 311 Gene3D G3DSA:1.10.10.10 2 80 8.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05505 e1952e6395e52585b9e9facea86af67a 311 Pfam PF03466 LysR substrate binding domain 89 287 5.7E-26 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS05505 e1952e6395e52585b9e9facea86af67a 311 SUPERFAMILY SSF53850 89 287 2.79E-26 T 22-04-2016 R615_RS05505 e1952e6395e52585b9e9facea86af67a 311 SUPERFAMILY SSF46785 4 89 2.48E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS07440 b6a82fd57d52948f1b74ca5e8b95514c 112 PANTHER PTHR33154 16 112 1.1E-28 T 22-04-2016 R615_RS07440 b6a82fd57d52948f1b74ca5e8b95514c 112 SUPERFAMILY SSF46785 8 104 7.68E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS07440 b6a82fd57d52948f1b74ca5e8b95514c 112 PANTHER PTHR33154:SF10 16 112 1.1E-28 T 22-04-2016 R615_RS07440 b6a82fd57d52948f1b74ca5e8b95514c 112 SMART SM00418 22 100 4.1E-26 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS07440 b6a82fd57d52948f1b74ca5e8b95514c 112 Pfam PF01022 Bacterial regulatory protein, arsR family 30 74 2.1E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS07440 b6a82fd57d52948f1b74ca5e8b95514c 112 Gene3D G3DSA:1.10.10.10 16 104 6.6E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS07440 b6a82fd57d52948f1b74ca5e8b95514c 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 54 7.3E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS07440 b6a82fd57d52948f1b74ca5e8b95514c 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 7.3E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS07440 b6a82fd57d52948f1b74ca5e8b95514c 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 7.3E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS07440 b6a82fd57d52948f1b74ca5e8b95514c 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 7.3E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS02120 88c6d5f26722037a4bff317380f9ec60 152 PANTHER PTHR33371 1 147 1.0E-36 T 22-04-2016 R615_RS02120 88c6d5f26722037a4bff317380f9ec60 152 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 148 9.8E-56 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 R615_RS02120 88c6d5f26722037a4bff317380f9ec60 152 Pfam PF02470 MlaD protein 38 115 3.0E-22 T 22-04-2016 IPR003399 Mce/MlaD R615_RS02530 884f58188fafb30258d7facdd670251d 334 SUPERFAMILY SSF100950 3 325 2.27E-112 T 22-04-2016 R615_RS02530 884f58188fafb30258d7facdd670251d 334 Gene3D G3DSA:3.40.50.10470 144 327 2.7E-67 T 22-04-2016 R615_RS02530 884f58188fafb30258d7facdd670251d 334 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 332 39.752 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 R615_RS02530 884f58188fafb30258d7facdd670251d 334 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 37 321 2.3E-108 T 22-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 R615_RS02530 884f58188fafb30258d7facdd670251d 334 PANTHER PTHR10233:SF6 10 326 1.1E-155 T 22-04-2016 R615_RS02530 884f58188fafb30258d7facdd670251d 334 Gene3D G3DSA:1.20.120.420 9 143 1.5E-45 T 22-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 R615_RS02530 884f58188fafb30258d7facdd670251d 334 PANTHER PTHR10233 10 326 1.1E-155 T 22-04-2016 R615_RS02530 884f58188fafb30258d7facdd670251d 334 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 9 321 6.5E-131 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 R615_RS02530 884f58188fafb30258d7facdd670251d 334 Pfam PF01008 Initiation factor 2 subunit family 50 320 4.3E-72 T 22-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 R615_RS17420 dfdee519ff4e45fabc65fb4af9ff3d64 221 SUPERFAMILY SSF53335 5 143 4.72E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS17420 dfdee519ff4e45fabc65fb4af9ff3d64 221 Pfam PF08241 Methyltransferase domain 4 85 1.2E-7 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 R615_RS17420 dfdee519ff4e45fabc65fb4af9ff3d64 221 Gene3D G3DSA:3.40.50.150 3 175 1.4E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS17420 dfdee519ff4e45fabc65fb4af9ff3d64 221 PANTHER PTHR10108:SF836 45 188 4.6E-17 T 22-04-2016 R615_RS17420 dfdee519ff4e45fabc65fb4af9ff3d64 221 PANTHER PTHR10108 45 188 4.6E-17 T 22-04-2016 R615_RS01115 0953a24724553644e5c16fe451dbcfe5 238 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS01115 0953a24724553644e5c16fe451dbcfe5 238 SUPERFAMILY SSF52540 13 236 6.34E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01115 0953a24724553644e5c16fe451dbcfe5 238 SMART SM00382 41 227 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS01115 0953a24724553644e5c16fe451dbcfe5 238 Pfam PF00005 ABC transporter 32 178 3.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS01115 0953a24724553644e5c16fe451dbcfe5 238 Gene3D G3DSA:3.40.50.300 12 237 1.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01115 0953a24724553644e5c16fe451dbcfe5 238 PANTHER PTHR24220 14 238 5.1E-101 T 22-04-2016 R615_RS01115 0953a24724553644e5c16fe451dbcfe5 238 PANTHER PTHR24220:SF509 14 238 5.1E-101 T 22-04-2016 R615_RS03360 7295c01c35b8b0449e8d1e5069314640 328 PANTHER PTHR11082:SF25 4 325 1.2E-134 T 22-04-2016 R615_RS03360 7295c01c35b8b0449e8d1e5069314640 328 PANTHER PTHR11082 4 325 1.2E-134 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 R615_RS03360 7295c01c35b8b0449e8d1e5069314640 328 Gene3D G3DSA:1.10.1200.80 253 323 1.5E-17 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 R615_RS03360 7295c01c35b8b0449e8d1e5069314640 328 PIRSF PIRSF006621 2 328 2.3E-100 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 R615_RS03360 7295c01c35b8b0449e8d1e5069314640 328 SUPERFAMILY SSF51395 11 317 2.93E-82 T 22-04-2016 R615_RS03360 7295c01c35b8b0449e8d1e5069314640 328 Gene3D G3DSA:3.20.20.70 9 245 1.4E-80 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS03360 7295c01c35b8b0449e8d1e5069314640 328 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 2 321 48.11 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 R615_RS03360 7295c01c35b8b0449e8d1e5069314640 328 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 R615_RS03360 7295c01c35b8b0449e8d1e5069314640 328 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 318 3.5E-120 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 R615_RS03360 7295c01c35b8b0449e8d1e5069314640 328 Pfam PF01207 Dihydrouridine synthase (Dus) 14 317 6.5E-104 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 R615_RS00845 8917d52750f49dc3a9e6c8d71c87e1f3 283 Gene3D G3DSA:3.40.50.720 8 273 3.7E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00845 8917d52750f49dc3a9e6c8d71c87e1f3 283 PANTHER PTHR10366:SF12 3 280 5.2E-46 T 22-04-2016 R615_RS00845 8917d52750f49dc3a9e6c8d71c87e1f3 283 SUPERFAMILY SSF51735 1 278 5.87E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS00845 8917d52750f49dc3a9e6c8d71c87e1f3 283 PANTHER PTHR10366 3 280 5.2E-46 T 22-04-2016 R615_RS00845 8917d52750f49dc3a9e6c8d71c87e1f3 283 Pfam PF13460 NAD(P)H-binding 8 162 5.4E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 SMART SM01004 10 334 4.7E-245 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 PANTHER PTHR11458 8 334 3.2E-187 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 SUPERFAMILY SSF51569 7 335 1.88E-146 T 22-04-2016 R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 3.9E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 3.9E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 3.9E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 3.9E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 3.9E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 3.9E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 Gene3D G3DSA:3.20.20.70 7 335 1.4E-152 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 333 8.6E-143 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16340 52b6a1eef9bd75535a9113060ea7486c 336 PIRSF PIRSF001415 3 336 9.2E-151 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS13610 12d78beb2990409dea293505a09a3134 222 PANTHER PTHR23029:SF1 7 189 2.9E-33 T 22-04-2016 R615_RS13610 12d78beb2990409dea293505a09a3134 222 SMART SM00855 10 161 2.7E-11 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 R615_RS13610 12d78beb2990409dea293505a09a3134 222 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 13 192 7.6E-42 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 R615_RS13610 12d78beb2990409dea293505a09a3134 222 Gene3D G3DSA:3.40.50.1240 4 195 1.2E-41 T 22-04-2016 IPR029033 Histidine phosphatase superfamily R615_RS13610 12d78beb2990409dea293505a09a3134 222 PIRSF PIRSF000709 5 218 3.3E-7 T 22-04-2016 R615_RS13610 12d78beb2990409dea293505a09a3134 222 PANTHER PTHR23029 7 189 2.9E-33 T 22-04-2016 R615_RS13610 12d78beb2990409dea293505a09a3134 222 SUPERFAMILY SSF53254 10 201 2.95E-44 T 22-04-2016 IPR029033 Histidine phosphatase superfamily R615_RS16390 423d6ed99a3a1e2e4fe641ee2fec347d 220 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 187 8.5E-18 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 R615_RS16390 423d6ed99a3a1e2e4fe641ee2fec347d 220 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 28 207 3.2E-14 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 Gene3D G3DSA:3.40.50.720 2 113 1.7E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08495 ddb698a4219ded87f42956e33633164f 456 Gene3D G3DSA:3.40.1010.10 214 330 2.7E-45 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 SUPERFAMILY SSF75615 115 210 1.7E-20 T 22-04-2016 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 PIRSF PIRSF036426 1 456 3.3E-174 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 2.2E-7 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 SUPERFAMILY SSF51735 2 114 2.56E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08495 ddb698a4219ded87f42956e33633164f 456 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 219 426 7.6E-51 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 Pfam PF13241 Putative NAD(P)-binding 6 116 3.3E-22 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 Gene3D G3DSA:1.10.8.210 150 210 5.6E-8 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 Gene3D G3DSA:3.30.160.110 114 149 4.3E-16 T 22-04-2016 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 Pfam PF10414 Sirohaem synthase dimerisation region 152 207 2.2E-11 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 PANTHER PTHR21091 164 444 6.7E-82 T 22-04-2016 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 Gene3D G3DSA:3.30.950.10 331 455 1.7E-48 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 PANTHER PTHR21091:SF16 164 444 6.7E-82 T 22-04-2016 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 205 4.7E-46 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 450 9.6E-91 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 R615_RS08495 ddb698a4219ded87f42956e33633164f 456 SUPERFAMILY SSF53790 214 455 3.14E-79 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 R615_RS09175 8a74a76642d511f3ec0998b75c95cb37 163 PANTHER PTHR33254:SF7 3 161 8.1E-85 T 22-04-2016 R615_RS09175 8a74a76642d511f3ec0998b75c95cb37 163 SUPERFAMILY SSF89562 5 159 1.57E-50 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein R615_RS09175 8a74a76642d511f3ec0998b75c95cb37 163 Pfam PF03737 Demethylmenaquinone methyltransferase 6 154 6.2E-46 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein R615_RS09175 8a74a76642d511f3ec0998b75c95cb37 163 PANTHER PTHR33254 3 161 8.1E-85 T 22-04-2016 R615_RS09175 8a74a76642d511f3ec0998b75c95cb37 163 Gene3D G3DSA:3.50.30.40 4 159 7.3E-57 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein R615_RS09175 8a74a76642d511f3ec0998b75c95cb37 163 TIGRFAM TIGR01935 NOT-MenG: RraA family 6 155 5.4E-69 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 R615_RS05850 a9b594cd376dd73e040ba6e739a27b0b 159 Pfam PF02308 MgtC family 18 139 1.1E-28 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 R615_RS05850 a9b594cd376dd73e040ba6e739a27b0b 159 PANTHER PTHR33778 17 140 7.5E-29 T 22-04-2016 R615_RS05850 a9b594cd376dd73e040ba6e739a27b0b 159 PRINTS PR01837 MgtC/SapB protein signature 93 117 1.0E-33 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 R615_RS05850 a9b594cd376dd73e040ba6e739a27b0b 159 PRINTS PR01837 MgtC/SapB protein signature 39 57 1.0E-33 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 R615_RS05850 a9b594cd376dd73e040ba6e739a27b0b 159 PRINTS PR01837 MgtC/SapB protein signature 66 88 1.0E-33 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 R615_RS05850 a9b594cd376dd73e040ba6e739a27b0b 159 PRINTS PR01837 MgtC/SapB protein signature 20 39 1.0E-33 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 R615_RS02040 e9031ddff60261015e5827488e6fbb18 1326 PANTHER PTHR38690 1 1307 4.7E-137 T 22-04-2016 R615_RS02040 e9031ddff60261015e5827488e6fbb18 1326 Pfam PF13116 Protein of unknown function 530 800 2.1E-41 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 R615_RS02040 e9031ddff60261015e5827488e6fbb18 1326 Pfam PF13502 AsmA-like C-terminal region 1044 1287 1.2E-43 T 22-04-2016 IPR032712 AsmA-like, C-terminal R615_RS02040 e9031ddff60261015e5827488e6fbb18 1326 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 11 1290 4.8E-176 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 R615_RS08040 a34cd745614e6915c998c7a5b863be35 783 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 257 435 4.1E-19 T 22-04-2016 IPR004477 ComEC/Rec2-related protein R615_RS08040 a34cd745614e6915c998c7a5b863be35 783 Pfam PF13567 Domain of unknown function (DUF4131) 13 200 1.2E-14 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 R615_RS08040 a34cd745614e6915c998c7a5b863be35 783 Gene3D G3DSA:3.60.15.10 520 755 6.1E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS08040 a34cd745614e6915c998c7a5b863be35 783 Pfam PF03772 Competence protein 235 492 1.8E-43 T 22-04-2016 IPR004477 ComEC/Rec2-related protein R615_RS08040 a34cd745614e6915c998c7a5b863be35 783 SMART SM00849 530 730 1.2E-4 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS08040 a34cd745614e6915c998c7a5b863be35 783 SUPERFAMILY SSF56281 523 769 8.39E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS08040 a34cd745614e6915c998c7a5b863be35 783 Pfam PF00753 Metallo-beta-lactamase superfamily 527 727 1.1E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS08040 a34cd745614e6915c998c7a5b863be35 783 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 149 759 1.8E-80 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 R615_RS08040 a34cd745614e6915c998c7a5b863be35 783 PANTHER PTHR30619 141 759 7.5E-118 T 22-04-2016 R615_RS08040 a34cd745614e6915c998c7a5b863be35 783 PANTHER PTHR30619:SF2 141 759 7.5E-118 T 22-04-2016 R615_RS08470 7fc6df7742acf292299c757f37c5661e 882 Pfam PF01580 FtsK/SpoIIIE family 502 715 4.6E-67 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 R615_RS08470 7fc6df7742acf292299c757f37c5661e 882 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 24 190 1.1E-35 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region R615_RS08470 7fc6df7742acf292299c757f37c5661e 882 SUPERFAMILY SSF52540 475 788 8.86E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08470 7fc6df7742acf292299c757f37c5661e 882 PANTHER PTHR22683 367 877 5.4E-266 T 22-04-2016 R615_RS08470 7fc6df7742acf292299c757f37c5661e 882 SMART SM00843 815 880 4.9E-38 T 22-04-2016 IPR018541 FtsK gamma domain R615_RS08470 7fc6df7742acf292299c757f37c5661e 882 SUPERFAMILY SSF46785 815 880 2.86E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS08470 7fc6df7742acf292299c757f37c5661e 882 Pfam PF09397 Ftsk gamma domain 817 877 1.4E-26 T 22-04-2016 IPR018541 FtsK gamma domain R615_RS08470 7fc6df7742acf292299c757f37c5661e 882 PANTHER PTHR22683:SF41 367 877 5.4E-266 T 22-04-2016 R615_RS08470 7fc6df7742acf292299c757f37c5661e 882 Gene3D G3DSA:3.40.50.300 476 782 1.5E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06225 51a9282544b326af922d01e109db1796 631 PANTHER PTHR10366:SF256 280 558 1.2E-125 T 22-04-2016 R615_RS06225 51a9282544b326af922d01e109db1796 631 Pfam PF02719 Polysaccharide biosynthesis protein 281 574 2.5E-128 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain R615_RS06225 51a9282544b326af922d01e109db1796 631 SUPERFAMILY SSF53335 114 325 8.47E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS06225 51a9282544b326af922d01e109db1796 631 PANTHER PTHR10366 280 558 1.2E-125 T 22-04-2016 R615_RS06225 51a9282544b326af922d01e109db1796 631 SUPERFAMILY SSF51735 279 591 2.73E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06225 51a9282544b326af922d01e109db1796 631 Gene3D G3DSA:3.90.25.10 466 550 3.9E-6 T 22-04-2016 R615_RS06225 51a9282544b326af922d01e109db1796 631 Gene3D G3DSA:3.40.50.720 140 241 4.8E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06225 51a9282544b326af922d01e109db1796 631 Pfam PF13727 CoA-binding domain 67 233 1.7E-7 T 22-04-2016 R615_RS06225 51a9282544b326af922d01e109db1796 631 Gene3D G3DSA:3.40.50.720 279 465 1.8E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS05595 04024789a7208d48c0774dc493e99cb8 86 PANTHER PTHR38813 1 83 1.0E-12 T 22-04-2016 R615_RS05595 04024789a7208d48c0774dc493e99cb8 86 SUPERFAMILY SSF143011 1 83 3.27E-19 T 22-04-2016 R615_RS05595 04024789a7208d48c0774dc493e99cb8 86 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 83 3.9E-9 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family R615_RS05595 04024789a7208d48c0774dc493e99cb8 86 PANTHER PTHR38813:SF1 1 83 1.0E-12 T 22-04-2016 R615_RS16355 5412f6cf3cb94563cc54ff5ac4fdd6df 108 Pfam PF00085 Thioredoxin 5 106 4.4E-34 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 R615_RS16355 5412f6cf3cb94563cc54ff5ac4fdd6df 108 PRINTS PR00421 Thioredoxin family signature 72 83 5.8E-10 T 22-04-2016 R615_RS16355 5412f6cf3cb94563cc54ff5ac4fdd6df 108 PRINTS PR00421 Thioredoxin family signature 24 32 5.8E-10 T 22-04-2016 R615_RS16355 5412f6cf3cb94563cc54ff5ac4fdd6df 108 PRINTS PR00421 Thioredoxin family signature 32 41 5.8E-10 T 22-04-2016 R615_RS16355 5412f6cf3cb94563cc54ff5ac4fdd6df 108 Gene3D G3DSA:3.40.30.10 2 107 1.2E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS16355 5412f6cf3cb94563cc54ff5ac4fdd6df 108 SUPERFAMILY SSF52833 2 107 1.36E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS16355 5412f6cf3cb94563cc54ff5ac4fdd6df 108 PANTHER PTHR10438:SF255 8 105 7.4E-41 T 22-04-2016 R615_RS16355 5412f6cf3cb94563cc54ff5ac4fdd6df 108 PANTHER PTHR10438 8 105 7.4E-41 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 R615_RS16355 5412f6cf3cb94563cc54ff5ac4fdd6df 108 PIRSF PIRSF000077 2 108 1.6E-44 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 R615_RS16355 5412f6cf3cb94563cc54ff5ac4fdd6df 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.3E-40 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 R615_RS16355 5412f6cf3cb94563cc54ff5ac4fdd6df 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 R615_RS05180 1cc78243d7fd763d24e65bdfb4039ac0 337 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 208 4.0E-34 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS05180 1cc78243d7fd763d24e65bdfb4039ac0 337 PANTHER PTHR11019 239 337 2.5E-22 T 22-04-2016 R615_RS05180 1cc78243d7fd763d24e65bdfb4039ac0 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 332 1.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS05180 1cc78243d7fd763d24e65bdfb4039ac0 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 316 1.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS05180 1cc78243d7fd763d24e65bdfb4039ac0 337 Gene3D G3DSA:1.10.10.60 286 335 2.9E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS05180 1cc78243d7fd763d24e65bdfb4039ac0 337 SMART SM00342 250 332 7.3E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS05180 1cc78243d7fd763d24e65bdfb4039ac0 337 SUPERFAMILY SSF46689 286 334 8.06E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS05180 1cc78243d7fd763d24e65bdfb4039ac0 337 PANTHER PTHR11019:SF52 239 337 2.5E-22 T 22-04-2016 R615_RS05180 1cc78243d7fd763d24e65bdfb4039ac0 337 Pfam PF12833 Helix-turn-helix domain 257 334 1.2E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS10315 7b8c67c195b7cb4755fe8ebd161965ed 219 SUPERFAMILY SSF52058 45 196 7.78E-23 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like R615_RS10315 7b8c67c195b7cb4755fe8ebd161965ed 219 Gene3D G3DSA:3.80.10.10 46 195 1.8E-27 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like R615_RS10315 7b8c67c195b7cb4755fe8ebd161965ed 219 Pfam PF13855 Leucine rich repeat 76 131 1.3E-6 T 22-04-2016 IPR001611 Leucine-rich repeat GO:0005515 R615_RS10315 7b8c67c195b7cb4755fe8ebd161965ed 219 PANTHER PTHR24365 52 193 7.0E-19 T 22-04-2016 R615_RS07065 05cf9b505680c70f20e5b4ea16996137 216 Gene3D G3DSA:1.10.357.10 5 209 1.2E-40 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS07065 05cf9b505680c70f20e5b4ea16996137 216 SUPERFAMILY SSF48498 83 210 5.56E-34 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal R615_RS07065 05cf9b505680c70f20e5b4ea16996137 216 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site R615_RS07065 05cf9b505680c70f20e5b4ea16996137 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 2.0E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS07065 05cf9b505680c70f20e5b4ea16996137 216 PANTHER PTHR30055:SF73 5 170 2.1E-36 T 22-04-2016 R615_RS07065 05cf9b505680c70f20e5b4ea16996137 216 SUPERFAMILY SSF46689 4 76 1.03E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS07065 05cf9b505680c70f20e5b4ea16996137 216 PANTHER PTHR30055 5 170 2.1E-36 T 22-04-2016 R615_RS07065 05cf9b505680c70f20e5b4ea16996137 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 3.2E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS07065 05cf9b505680c70f20e5b4ea16996137 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 3.2E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS01870 bec36b0705ccd4c3fb34982fcab9567d 208 Gene3D G3DSA:3.40.30.10 6 99 2.4E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS01870 bec36b0705ccd4c3fb34982fcab9567d 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 103 193 1.3E-8 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal R615_RS01870 bec36b0705ccd4c3fb34982fcab9567d 208 SUPERFAMILY SSF52833 9 108 1.78E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS01870 bec36b0705ccd4c3fb34982fcab9567d 208 Gene3D G3DSA:1.20.1050.10 100 206 4.7E-19 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS01870 bec36b0705ccd4c3fb34982fcab9567d 208 PANTHER PTHR11260:SF44 8 207 3.7E-110 T 22-04-2016 R615_RS01870 bec36b0705ccd4c3fb34982fcab9567d 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 86 3.2E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 R615_RS01870 bec36b0705ccd4c3fb34982fcab9567d 208 PANTHER PTHR11260 8 207 3.7E-110 T 22-04-2016 R615_RS01870 bec36b0705ccd4c3fb34982fcab9567d 208 SUPERFAMILY SSF47616 81 207 6.4E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS08055 7d1764ae4b45468af1a413d4ba0e493a 580 SMART SM00382 365 552 2.7E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS08055 7d1764ae4b45468af1a413d4ba0e493a 580 Gene3D G3DSA:1.20.1560.10 12 322 1.9E-61 T 22-04-2016 R615_RS08055 7d1764ae4b45468af1a413d4ba0e493a 580 Pfam PF00005 ABC transporter 357 506 2.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS08055 7d1764ae4b45468af1a413d4ba0e493a 580 SUPERFAMILY SSF52540 330 577 1.04E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08055 7d1764ae4b45468af1a413d4ba0e493a 580 Gene3D G3DSA:3.40.50.300 337 571 1.2E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08055 7d1764ae4b45468af1a413d4ba0e493a 580 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 11 579 5.4E-211 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 R615_RS08055 7d1764ae4b45468af1a413d4ba0e493a 580 SUPERFAMILY SSF90123 12 324 3.4E-66 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 R615_RS08055 7d1764ae4b45468af1a413d4ba0e493a 580 PANTHER PTHR24221 9 579 5.4E-223 T 22-04-2016 R615_RS08055 7d1764ae4b45468af1a413d4ba0e493a 580 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS08055 7d1764ae4b45468af1a413d4ba0e493a 580 Pfam PF00664 ABC transporter transmembrane region 42 291 3.6E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 R615_RS09595 9c8caef131db5480cc5672197184225d 305 Gene3D G3DSA:1.10.8.300 199 285 8.2E-26 T 22-04-2016 R615_RS09595 9c8caef131db5480cc5672197184225d 305 PANTHER PTHR11603:SF155 1 286 4.1E-154 T 22-04-2016 R615_RS09595 9c8caef131db5480cc5672197184225d 305 PIRSF PIRSF002849 1 302 1.7E-113 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted R615_RS09595 9c8caef131db5480cc5672197184225d 305 Gene3D G3DSA:3.40.50.300 19 183 6.8E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09595 9c8caef131db5480cc5672197184225d 305 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 167 2.2E-61 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 R615_RS09595 9c8caef131db5480cc5672197184225d 305 SUPERFAMILY SSF52540 7 283 3.86E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09595 9c8caef131db5480cc5672197184225d 305 PANTHER PTHR11603 1 286 4.1E-154 T 22-04-2016 R615_RS14305 3fb71bd786a5ec03ab3b5e2f3aaf1011 270 Pfam PF13489 Methyltransferase domain 59 216 5.3E-15 T 22-04-2016 R615_RS14305 3fb71bd786a5ec03ab3b5e2f3aaf1011 270 Gene3D G3DSA:3.40.50.150 53 224 6.4E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS14305 3fb71bd786a5ec03ab3b5e2f3aaf1011 270 SUPERFAMILY SSF53335 20 268 7.35E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS14305 3fb71bd786a5ec03ab3b5e2f3aaf1011 270 PANTHER PTHR10108 39 222 2.3E-22 T 22-04-2016 R615_RS06460 f8ae0c338c79c552e9e2962fa524df70 254 PANTHER PTHR10859 16 236 2.3E-47 T 22-04-2016 R615_RS06460 f8ae0c338c79c552e9e2962fa524df70 254 Gene3D G3DSA:3.90.550.10 15 182 8.7E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS06460 f8ae0c338c79c552e9e2962fa524df70 254 Pfam PF00535 Glycosyl transferase family 2 17 177 6.9E-27 T 22-04-2016 IPR001173 Glycosyltransferase 2-like R615_RS06460 f8ae0c338c79c552e9e2962fa524df70 254 SUPERFAMILY SSF53448 13 238 4.5E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS05025 220794293a53c68b9632870d2cb24858 350 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 348 36.53 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS05025 220794293a53c68b9632870d2cb24858 350 SMART SM00448 5 124 2.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS05025 220794293a53c68b9632870d2cb24858 350 Pfam PF01339 CheB methylesterase 164 343 4.2E-50 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS05025 220794293a53c68b9632870d2cb24858 350 PANTHER PTHR24421:SF21 5 339 1.9E-120 T 22-04-2016 R615_RS05025 220794293a53c68b9632870d2cb24858 350 SUPERFAMILY SSF52172 4 123 8.11E-28 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS05025 220794293a53c68b9632870d2cb24858 350 PIRSF PIRSF000876 2 350 3.0E-122 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS05025 220794293a53c68b9632870d2cb24858 350 Pfam PF00072 Response regulator receiver domain 7 113 1.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS05025 220794293a53c68b9632870d2cb24858 350 Gene3D G3DSA:3.40.50.180 161 345 2.3E-64 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS05025 220794293a53c68b9632870d2cb24858 350 SUPERFAMILY SSF52738 162 346 1.57E-56 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS05025 220794293a53c68b9632870d2cb24858 350 Gene3D G3DSA:3.40.50.2300 2 124 1.3E-28 T 22-04-2016 R615_RS05025 220794293a53c68b9632870d2cb24858 350 PANTHER PTHR24421 5 339 1.9E-120 T 22-04-2016 R615_RS03950 a2f55cc233719579936f7b8a9ca96462 132 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 122 20.388 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 R615_RS03950 a2f55cc233719579936f7b8a9ca96462 132 SUPERFAMILY SSF89919 2 117 8.9E-29 T 22-04-2016 IPR023799 Ribosome-binding factor A domain R615_RS03950 a2f55cc233719579936f7b8a9ca96462 132 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 6 116 1.2E-22 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 R615_RS03950 a2f55cc233719579936f7b8a9ca96462 132 Gene3D G3DSA:3.30.300.20 4 122 9.0E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta R615_RS03950 a2f55cc233719579936f7b8a9ca96462 132 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 102 1.0E-21 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 R615_RS03950 a2f55cc233719579936f7b8a9ca96462 132 PANTHER PTHR33515 1 132 5.0E-37 T 22-04-2016 R615_RS03950 a2f55cc233719579936f7b8a9ca96462 132 Pfam PF02033 Ribosome-binding factor A 7 114 7.5E-26 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 R615_RS00075 276ed545a33542e8f15f1c61c18402d6 183 PIRSF PIRSF004682 1 182 2.6E-52 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 R615_RS00075 276ed545a33542e8f15f1c61c18402d6 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 144 1.9E-43 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 R615_RS00075 276ed545a33542e8f15f1c61c18402d6 183 Gene3D G3DSA:3.40.50.1000 1 178 6.7E-54 T 22-04-2016 IPR023214 HAD-like domain R615_RS00075 276ed545a33542e8f15f1c61c18402d6 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 2 146 3.2E-33 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA R615_RS00075 276ed545a33542e8f15f1c61c18402d6 183 SUPERFAMILY SSF56784 1 179 9.44E-47 T 22-04-2016 IPR023214 HAD-like domain R615_RS00075 276ed545a33542e8f15f1c61c18402d6 183 PANTHER PTHR23133:SF7 2 174 3.6E-63 T 22-04-2016 R615_RS00075 276ed545a33542e8f15f1c61c18402d6 183 PANTHER PTHR23133 2 174 3.6E-63 T 22-04-2016 R615_RS00075 276ed545a33542e8f15f1c61c18402d6 183 Pfam PF13242 HAD-hyrolase-like 99 157 2.5E-13 T 22-04-2016 R615_RS12575 d82cd20150302d5bcc32da072702a39b 281 SUPERFAMILY SSF109604 12 271 1.88E-56 T 22-04-2016 R615_RS12575 d82cd20150302d5bcc32da072702a39b 281 PANTHER PTHR33525 3 281 1.6E-79 T 22-04-2016 R615_RS12575 d82cd20150302d5bcc32da072702a39b 281 Pfam PF08668 HDOD domain 24 205 5.9E-45 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS12575 d82cd20150302d5bcc32da072702a39b 281 PANTHER PTHR33525:SF2 3 281 1.6E-79 T 22-04-2016 R615_RS12575 d82cd20150302d5bcc32da072702a39b 281 Gene3D G3DSA:1.10.3150.10 5 272 4.8E-64 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS16255 67e31bb2de91d0a0dd77f8f509c11f42 421 PANTHER PTHR11986:SF61 1 417 6.1E-194 T 22-04-2016 R615_RS16255 67e31bb2de91d0a0dd77f8f509c11f42 421 SUPERFAMILY SSF53383 9 410 6.05E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS16255 67e31bb2de91d0a0dd77f8f509c11f42 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 3 409 6.0E-189 T 22-04-2016 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 R615_RS16255 67e31bb2de91d0a0dd77f8f509c11f42 421 Pfam PF00202 Aminotransferase class-III 19 409 9.2E-78 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS16255 67e31bb2de91d0a0dd77f8f509c11f42 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 4 415 4.6E-136 T 22-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 R615_RS16255 67e31bb2de91d0a0dd77f8f509c11f42 421 Gene3D G3DSA:3.40.640.10 55 310 5.1E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS16255 67e31bb2de91d0a0dd77f8f509c11f42 421 Gene3D G3DSA:3.90.1150.10 315 410 1.3E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS16255 67e31bb2de91d0a0dd77f8f509c11f42 421 Gene3D G3DSA:3.90.1150.10 15 54 1.3E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS16255 67e31bb2de91d0a0dd77f8f509c11f42 421 PANTHER PTHR11986 1 417 6.1E-194 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS16255 67e31bb2de91d0a0dd77f8f509c11f42 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 231 267 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 SUPERFAMILY SSF103647 283 355 1.26E-10 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 SUPERFAMILY SSF103647 24 125 6.93E-13 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 SUPERFAMILY SSF103647 204 280 3.92E-10 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 SUPERFAMILY SSF103647 583 654 3.92E-9 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Gene3D G3DSA:4.10.1080.10 586 635 1.8E-10 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Gene3D G3DSA:4.10.1080.10 466 573 2.6E-18 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Gene3D G3DSA:4.10.1080.10 636 723 1.8E-16 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Gene3D G3DSA:4.10.1080.10 111 199 2.6E-19 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Gene3D G3DSA:4.10.1080.10 261 349 9.1E-20 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Gene3D G3DSA:4.10.1080.10 204 260 3.6E-13 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Gene3D G3DSA:4.10.1080.10 355 465 2.9E-17 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Gene3D G3DSA:4.10.1080.10 24 110 5.8E-19 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Pfam PF02412 Thrombospondin type 3 repeat 212 240 0.0057 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Pfam PF02412 Thrombospondin type 3 repeat 97 121 0.0084 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Pfam PF02412 Thrombospondin type 3 repeat 137 169 0.0019 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Pfam PF02412 Thrombospondin type 3 repeat 173 196 0.0053 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Pfam PF02412 Thrombospondin type 3 repeat 437 466 0.0027 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Pfam PF02412 Thrombospondin type 3 repeat 623 645 0.006 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Pfam PF02412 Thrombospondin type 3 repeat 398 420 0.016 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Pfam PF02412 Thrombospondin type 3 repeat 548 570 0.012 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Pfam PF02412 Thrombospondin type 3 repeat 288 316 0.014 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Pfam PF02412 Thrombospondin type 3 repeat 473 494 0.014 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 Pfam PF02412 Thrombospondin type 3 repeat 63 88 0.0022 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 SUPERFAMILY SSF103647 128 206 2.22E-9 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 SUPERFAMILY SSF103647 357 468 5.43E-14 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 SUPERFAMILY SSF103647 472 572 1.7E-9 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS13770 accb0f9e67526eba95a3c32a0d797d94 823 SUPERFAMILY SSF103647 653 727 1.16E-8 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS06150 33ab5ec0fb97c4a73b3c79d859e4d845 193 PANTHER PTHR23416:SF53 16 164 8.5E-52 T 22-04-2016 R615_RS06150 33ab5ec0fb97c4a73b3c79d859e4d845 193 Gene3D G3DSA:2.160.10.10 5 155 2.8E-43 T 22-04-2016 R615_RS06150 33ab5ec0fb97c4a73b3c79d859e4d845 193 PANTHER PTHR23416 16 164 8.5E-52 T 22-04-2016 R615_RS06150 33ab5ec0fb97c4a73b3c79d859e4d845 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 136 8.0E-6 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS06150 33ab5ec0fb97c4a73b3c79d859e4d845 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 49 3.4E-7 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS06150 33ab5ec0fb97c4a73b3c79d859e4d845 193 SUPERFAMILY SSF51161 5 158 6.65E-43 T 22-04-2016 IPR011004 Trimeric LpxA-like R615_RS12400 996b4ebe3804f654df400c04f518e82c 387 Gene3D G3DSA:3.40.640.10 18 258 2.6E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS12400 996b4ebe3804f654df400c04f518e82c 387 Gene3D G3DSA:3.90.1150.10 259 378 2.7E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS12400 996b4ebe3804f654df400c04f518e82c 387 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 201 220 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site R615_RS12400 996b4ebe3804f654df400c04f518e82c 387 Pfam PF00266 Aminotransferase class-V 5 372 7.0E-80 T 22-04-2016 IPR000192 Aminotransferase class V domain R615_RS12400 996b4ebe3804f654df400c04f518e82c 387 SUPERFAMILY SSF53383 4 381 4.52E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS12400 996b4ebe3804f654df400c04f518e82c 387 PANTHER PTHR11601 2 386 1.9E-179 T 22-04-2016 R615_RS12400 996b4ebe3804f654df400c04f518e82c 387 PIRSF PIRSF005572 1 387 3.4E-121 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 R615_RS12400 996b4ebe3804f654df400c04f518e82c 387 PANTHER PTHR11601:SF45 2 386 1.9E-179 T 22-04-2016 R615_RS01365 2b026b066f719295675853429976878f 274 PANTHER PTHR30222 1 267 1.8E-79 T 22-04-2016 R615_RS01365 2b026b066f719295675853429976878f 274 Gene3D G3DSA:1.10.3720.10 10 267 2.3E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS01365 2b026b066f719295675853429976878f 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 264 2.7E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS01365 2b026b066f719295675853429976878f 274 PANTHER PTHR30222:SF1 1 267 1.8E-79 T 22-04-2016 R615_RS01365 2b026b066f719295675853429976878f 274 SUPERFAMILY SSF161098 7 269 9.16E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 PANTHER PTHR24322 153 187 4.9E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 PANTHER PTHR24322 10 137 4.9E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 SUPERFAMILY SSF51735 1 263 1.78E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 Pfam PF00106 short chain dehydrogenase 6 194 2.8E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 9.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 9.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07735 e238e828226be0916a35adfcdcfcb15b 285 Gene3D G3DSA:3.40.50.720 5 260 6.2E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS12380 c0979817850243d1ce83149c4e1d332f 372 PANTHER PTHR30454 7 368 8.9E-204 T 22-04-2016 R615_RS12380 c0979817850243d1ce83149c4e1d332f 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 9 361 34.513 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 R615_RS12380 c0979817850243d1ce83149c4e1d332f 372 Pfam PF04551 GcpE protein 15 354 1.0E-133 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 R615_RS12380 c0979817850243d1ce83149c4e1d332f 372 SUPERFAMILY SSF56014 267 354 6.54E-11 T 22-04-2016 R615_RS12380 c0979817850243d1ce83149c4e1d332f 372 SUPERFAMILY SSF51412 26 134 2.93E-10 T 22-04-2016 R615_RS12380 c0979817850243d1ce83149c4e1d332f 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 11 353 1.2E-128 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 R615_RS12380 c0979817850243d1ce83149c4e1d332f 372 PIRSF PIRSF004640 3 365 2.2E-145 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 R615_RS12380 c0979817850243d1ce83149c4e1d332f 372 Gene3D G3DSA:3.20.20.70 29 134 4.2E-10 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS05720 208aa8d78ced7b19e7fb8c08db8c96ef 134 SUPERFAMILY SSF54593 1 128 4.03E-36 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase R615_RS05720 208aa8d78ced7b19e7fb8c08db8c96ef 134 PANTHER PTHR10374 1 132 1.3E-57 T 22-04-2016 R615_RS05720 208aa8d78ced7b19e7fb8c08db8c96ef 134 Gene3D G3DSA:3.10.180.10 1 130 4.4E-46 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase R615_RS05720 208aa8d78ced7b19e7fb8c08db8c96ef 134 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 R615_RS05720 208aa8d78ced7b19e7fb8c08db8c96ef 134 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 3.2E-63 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 R615_RS05720 208aa8d78ced7b19e7fb8c08db8c96ef 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 4.3E-24 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain R615_RS12185 02eeb01ad923679a4d836ae532ea1120 275 PANTHER PTHR33525 6 238 7.2E-46 T 22-04-2016 R615_RS12185 02eeb01ad923679a4d836ae532ea1120 275 SUPERFAMILY SSF109604 6 256 1.12E-59 T 22-04-2016 R615_RS12185 02eeb01ad923679a4d836ae532ea1120 275 PANTHER PTHR33525:SF3 6 238 7.2E-46 T 22-04-2016 R615_RS12185 02eeb01ad923679a4d836ae532ea1120 275 Gene3D G3DSA:1.10.3150.10 6 255 1.2E-68 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS12185 02eeb01ad923679a4d836ae532ea1120 275 Pfam PF08668 HDOD domain 13 205 3.6E-52 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS15840 212fc060270cc1a77781d12b74e1f75b 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.7E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 R615_RS15840 212fc060270cc1a77781d12b74e1f75b 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.7E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 R615_RS15840 212fc060270cc1a77781d12b74e1f75b 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.7E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 R615_RS15840 212fc060270cc1a77781d12b74e1f75b 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.7E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 R615_RS15840 212fc060270cc1a77781d12b74e1f75b 137 Gene3D G3DSA:3.90.1170.10 23 134 1.1E-52 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 R615_RS15840 212fc060270cc1a77781d12b74e1f75b 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 3.2E-59 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 R615_RS15840 212fc060270cc1a77781d12b74e1f75b 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.792 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 R615_RS15840 212fc060270cc1a77781d12b74e1f75b 137 SUPERFAMILY SSF54686 1 134 2.88E-54 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 R615_RS15840 212fc060270cc1a77781d12b74e1f75b 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15840 212fc060270cc1a77781d12b74e1f75b 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15840 212fc060270cc1a77781d12b74e1f75b 137 PANTHER PTHR12220 1 137 6.8E-74 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 R615_RS15840 212fc060270cc1a77781d12b74e1f75b 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.9E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 R615_RS12015 203f66b9bfc7f6c6abe9f504facff2c5 635 TIGRFAM TIGR03545 TIGR03545: TIGR03545 family protein 4 546 4.1E-117 T 22-04-2016 IPR019934 Conserved hypothetical protein CHP03545 R615_RS04725 633ed2083c05cca78b3344dbcae016f5 269 PANTHER PTHR12526 51 264 3.1E-45 T 22-04-2016 R615_RS04725 633ed2083c05cca78b3344dbcae016f5 269 Gene3D G3DSA:3.40.50.2000 89 238 6.7E-19 T 22-04-2016 R615_RS04725 633ed2083c05cca78b3344dbcae016f5 269 SUPERFAMILY SSF53756 47 264 3.81E-51 T 22-04-2016 R615_RS04725 633ed2083c05cca78b3344dbcae016f5 269 Pfam PF00534 Glycosyl transferases group 1 87 239 2.9E-30 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 R615_RS08360 53c39874eaf2e73f0ba9847cc9ce86e1 313 PANTHER PTHR31752:SF13 91 309 1.5E-44 T 22-04-2016 R615_RS08360 53c39874eaf2e73f0ba9847cc9ce86e1 313 PANTHER PTHR31752 91 309 1.5E-44 T 22-04-2016 R615_RS08360 53c39874eaf2e73f0ba9847cc9ce86e1 313 Pfam PF03547 Membrane transport protein 162 301 2.5E-9 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 R615_RS13160 c07d61eec3d1c36441da068ffb695541 151 Pfam PF02381 MraZ protein, putative antitoxin-like 78 127 3.3E-16 T 22-04-2016 IPR020603 MraZ domain R615_RS13160 c07d61eec3d1c36441da068ffb695541 151 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 1.1E-16 T 22-04-2016 IPR020603 MraZ domain R615_RS13160 c07d61eec3d1c36441da068ffb695541 151 SUPERFAMILY SSF89447 1 138 1.35E-46 T 22-04-2016 R615_RS13160 c07d61eec3d1c36441da068ffb695541 151 PANTHER PTHR34701 2 151 9.2E-60 T 22-04-2016 R615_RS13160 c07d61eec3d1c36441da068ffb695541 151 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 126 1.0E-43 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 R615_RS13160 c07d61eec3d1c36441da068ffb695541 151 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 143 2.8E-47 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 R615_RS13160 c07d61eec3d1c36441da068ffb695541 151 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 151 53.411 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 1 487 7.3E-140 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PANTHER PTHR11206:SF90 203 428 6.2E-89 T 22-04-2016 R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PANTHER PTHR11206:SF90 56 72 6.2E-89 T 22-04-2016 R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PANTHER PTHR11206:SF90 452 471 6.2E-89 T 22-04-2016 R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 Pfam PF03023 MviN-like protein 16 456 5.5E-140 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PRINTS PR01806 Virulence factor MviN signature 143 164 2.9E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PRINTS PR01806 Virulence factor MviN signature 19 38 2.9E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PRINTS PR01806 Virulence factor MviN signature 395 412 2.9E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PRINTS PR01806 Virulence factor MviN signature 343 362 2.9E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PRINTS PR01806 Virulence factor MviN signature 38 54 2.9E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PRINTS PR01806 Virulence factor MviN signature 245 271 2.9E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PRINTS PR01806 Virulence factor MviN signature 119 143 2.9E-75 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PANTHER PTHR11206 203 428 6.2E-89 T 22-04-2016 R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PANTHER PTHR11206 56 72 6.2E-89 T 22-04-2016 R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PANTHER PTHR11206 452 471 6.2E-89 T 22-04-2016 R615_RS03210 e9f18bbeb86a50460f5b4c696350802b 497 PIRSF PIRSF002869 1 495 1.0E-153 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ R615_RS04635 161fc8f9f70a3a006d5503b6750a8d4a 248 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 243 1.1E-20 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain R615_RS04635 161fc8f9f70a3a006d5503b6750a8d4a 248 SUPERFAMILY SSF117143 79 206 3.92E-18 T 22-04-2016 R615_RS04635 161fc8f9f70a3a006d5503b6750a8d4a 248 Pfam PF00460 Flagella basal body rod protein 5 35 2.8E-6 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 R615_RS04635 161fc8f9f70a3a006d5503b6750a8d4a 248 PANTHER PTHR30435 1 245 2.9E-81 T 22-04-2016 R615_RS04635 161fc8f9f70a3a006d5503b6750a8d4a 248 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 121 1.5E-34 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G R615_RS04635 161fc8f9f70a3a006d5503b6750a8d4a 248 PANTHER PTHR30435:SF18 1 245 2.9E-81 T 22-04-2016 R615_RS15155 d3dd5b647bc75a111ef62733bbaab2ce 175 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 10 169 8.3E-56 T 22-04-2016 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 R615_RS15155 d3dd5b647bc75a111ef62733bbaab2ce 175 Pfam PF09349 OHCU decarboxylase 11 167 1.7E-38 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 R615_RS15155 d3dd5b647bc75a111ef62733bbaab2ce 175 Gene3D G3DSA:1.10.3330.10 13 171 3.1E-42 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 R615_RS15155 d3dd5b647bc75a111ef62733bbaab2ce 175 SUPERFAMILY SSF158694 6 170 7.98E-41 T 22-04-2016 R615_RS00530 68b6580ad461a5beb094e194c5744477 712 SUPERFAMILY SSF46626 444 464 1.94E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00530 68b6580ad461a5beb094e194c5744477 712 SUPERFAMILY SSF46626 581 625 1.94E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00530 68b6580ad461a5beb094e194c5744477 712 SUPERFAMILY SSF46626 693 712 1.94E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00530 68b6580ad461a5beb094e194c5744477 712 Gene3D G3DSA:1.10.760.10 678 712 6.8E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00530 68b6580ad461a5beb094e194c5744477 712 Gene3D G3DSA:1.10.760.10 588 624 6.8E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS00530 68b6580ad461a5beb094e194c5744477 712 Gene3D G3DSA:1.10.760.10 444 517 6.8E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS16890 4b8ae0c08630d4ab54fd92823af54a7e 834 SUPERFAMILY SSF56059 335 455 2.12E-25 T 22-04-2016 R615_RS16890 4b8ae0c08630d4ab54fd92823af54a7e 834 SUPERFAMILY SSF56059 48 218 2.12E-25 T 22-04-2016 R615_RS16890 4b8ae0c08630d4ab54fd92823af54a7e 834 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 504 817 3.8E-63 T 22-04-2016 IPR007296 Domain of unknown function DUF403 R615_RS16890 4b8ae0c08630d4ab54fd92823af54a7e 834 PANTHER PTHR34595 6 830 1.5E-248 T 22-04-2016 R615_RS16890 4b8ae0c08630d4ab54fd92823af54a7e 834 PANTHER PTHR34595:SF1 6 830 1.5E-248 T 22-04-2016 R615_RS16890 4b8ae0c08630d4ab54fd92823af54a7e 834 Pfam PF14403 Circularly permuted ATP-grasp type 2 80 454 2.1E-150 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 R615_RS05365 6540814503b1e2985762632512a2b602 852 Pfam PF07244 Surface antigen variable number repeat 90 170 3.2E-10 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 R615_RS05365 6540814503b1e2985762632512a2b602 852 Pfam PF07244 Surface antigen variable number repeat 174 261 2.0E-18 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 R615_RS05365 6540814503b1e2985762632512a2b602 852 Pfam PF07244 Surface antigen variable number repeat 346 419 2.2E-13 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 R615_RS05365 6540814503b1e2985762632512a2b602 852 Pfam PF07244 Surface antigen variable number repeat 264 342 3.7E-8 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 R615_RS05365 6540814503b1e2985762632512a2b602 852 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 22 852 2.9E-259 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 R615_RS05365 6540814503b1e2985762632512a2b602 852 PIRSF PIRSF006076 1 852 4.4E-256 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 R615_RS05365 6540814503b1e2985762632512a2b602 852 Pfam PF01103 Surface antigen 446 852 8.9E-79 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 R615_RS05365 6540814503b1e2985762632512a2b602 852 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 852 25.11 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 R615_RS05365 6540814503b1e2985762632512a2b602 852 PANTHER PTHR12815 3 661 9.0E-225 T 22-04-2016 R615_RS05365 6540814503b1e2985762632512a2b602 852 PANTHER PTHR12815 738 852 9.0E-225 T 22-04-2016 R615_RS05365 6540814503b1e2985762632512a2b602 852 PANTHER PTHR12815:SF11 3 661 9.0E-225 T 22-04-2016 R615_RS05365 6540814503b1e2985762632512a2b602 852 PANTHER PTHR12815:SF11 738 852 9.0E-225 T 22-04-2016 R615_RS07820 9883fd37341494b57bca4c960aed877e 161 PANTHER PTHR11592 2 161 8.4E-82 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 R615_RS07820 9883fd37341494b57bca4c960aed877e 161 PIRSF PIRSF000303 1 161 2.0E-66 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 R615_RS07820 9883fd37341494b57bca4c960aed877e 161 SUPERFAMILY SSF52833 2 158 5.44E-59 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS07820 9883fd37341494b57bca4c960aed877e 161 PRINTS PR01011 Glutathione peroxidase family signature 122 131 4.6E-20 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 R615_RS07820 9883fd37341494b57bca4c960aed877e 161 PRINTS PR01011 Glutathione peroxidase family signature 56 72 4.6E-20 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 R615_RS07820 9883fd37341494b57bca4c960aed877e 161 PRINTS PR01011 Glutathione peroxidase family signature 21 38 4.6E-20 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 R615_RS07820 9883fd37341494b57bca4c960aed877e 161 Gene3D G3DSA:3.40.30.10 2 159 7.4E-69 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS07820 9883fd37341494b57bca4c960aed877e 161 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site R615_RS07820 9883fd37341494b57bca4c960aed877e 161 Pfam PF00255 Glutathione peroxidase 5 110 3.2E-41 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 R615_RS07820 9883fd37341494b57bca4c960aed877e 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 22-04-2016 IPR029759 Glutathione peroxidase active site R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 1.6E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 1.6E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 1.6E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 1.6E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 1.6E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 1.2E-156 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 PANTHER PTHR11778 1 425 6.3E-189 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 Gene3D G3DSA:1.10.287.40 1 105 2.5E-22 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 SUPERFAMILY SSF55681 117 420 1.21E-94 T 22-04-2016 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 PIRSF PIRSF001529 1 428 2.7E-167 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 Gene3D G3DSA:3.30.930.10 106 422 9.3E-131 T 22-04-2016 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 6.4E-23 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 224 402 1.5E-32 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 38.42 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 R615_RS08490 385370f119ad8006185ee2c7892a1ada 429 SUPERFAMILY SSF46589 1 113 3.98E-22 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 SUPERFAMILY SSF56091 8 321 1.64E-120 T 22-04-2016 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 412 439 1.1E-9 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Gene3D G3DSA:1.10.150.20 440 507 5.8E-28 T 22-04-2016 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Pfam PF12826 Helix-hairpin-helix motif 515 578 5.9E-22 T 22-04-2016 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 10 322 8.4E-132 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 PANTHER PTHR23389 10 539 7.0E-203 T 22-04-2016 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Gene3D G3DSA:2.40.50.140 324 396 9.4E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 SUPERFAMILY SSF52113 597 673 1.07E-16 T 22-04-2016 IPR001357 BRCT domain R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 119 148 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 SMART SM00532 7 453 1.6E-269 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 SMART SM00292 598 675 6.5E-8 T 22-04-2016 IPR001357 BRCT domain R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 600 669 1.0E-10 T 22-04-2016 IPR001357 BRCT domain R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 327 403 2.7E-35 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Hamap MF_01588 DNA ligase [ligA]. 6 672 53.223 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 336 351 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 PANTHER PTHR23389:SF9 10 539 7.0E-203 T 22-04-2016 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 PIRSF PIRSF001604 2 676 6.6E-254 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 15 667 1.1E-261 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Gene3D G3DSA:1.10.150.20 509 589 4.7E-31 T 22-04-2016 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Gene3D G3DSA:3.30.470.30 123 256 6.3E-51 T 22-04-2016 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 SUPERFAMILY SSF47781 409 589 2.15E-61 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 SUPERFAMILY SSF50249 324 404 5.31E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Gene3D G3DSA:3.40.50.10190 597 675 8.0E-25 T 22-04-2016 IPR001357 BRCT domain R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 SMART SM00278 549 568 460.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 SMART SM00278 485 504 12.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 SMART SM00278 451 470 48.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 SMART SM00278 517 536 310.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Pfam PF14520 Helix-hairpin-helix domain 451 506 2.0E-7 T 22-04-2016 R615_RS11280 0473b8913d8cd0d21dce4c8770ac57e2 682 Gene3D G3DSA:1.10.287.610 5 71 5.5E-29 T 22-04-2016 R615_RS12480 dd35cd28baca7c19bb334350f77583a3 447 Gene3D G3DSA:3.40.50.150 256 441 1.1E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12480 dd35cd28baca7c19bb334350f77583a3 447 PANTHER PTHR11061:SF30 6 446 7.7E-93 T 22-04-2016 R615_RS12480 dd35cd28baca7c19bb334350f77583a3 447 SUPERFAMILY SSF53335 69 440 4.0E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12480 dd35cd28baca7c19bb334350f77583a3 447 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 424 434 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site R615_RS12480 dd35cd28baca7c19bb334350f77583a3 447 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 373 403 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site R615_RS12480 dd35cd28baca7c19bb334350f77583a3 447 PANTHER PTHR11061 6 446 7.7E-93 T 22-04-2016 R615_RS12480 dd35cd28baca7c19bb334350f77583a3 447 SUPERFAMILY SSF50249 9 66 4.28E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12480 dd35cd28baca7c19bb334350f77583a3 447 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 368 440 1.7E-13 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 R615_RS12480 dd35cd28baca7c19bb334350f77583a3 447 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 275 337 3.8E-8 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 R615_RS12480 dd35cd28baca7c19bb334350f77583a3 447 Gene3D G3DSA:2.40.50.140 6 80 4.3E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12480 dd35cd28baca7c19bb334350f77583a3 447 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 18 434 4.4E-86 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 Gene3D G3DSA:3.40.1190.10 92 317 6.6E-84 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 3 454 8.2E-196 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 459 56.141 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 SUPERFAMILY SSF53244 316 455 1.24E-31 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 Gene3D G3DSA:3.90.190.20 318 456 4.7E-28 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 SUPERFAMILY SSF51984 1 90 1.28E-21 T 22-04-2016 R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 Pfam PF01225 Mur ligase family, catalytic domain 3 101 3.4E-16 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 Pfam PF08245 Mur ligase middle domain 108 296 3.6E-21 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 PANTHER PTHR23135 1 449 2.2E-238 T 22-04-2016 R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 Gene3D G3DSA:3.40.50.720 1 90 1.6E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 390 2.2E-8 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 SUPERFAMILY SSF53623 98 314 2.75E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13785 48046167c7e37b9bcb4efad45e815ddc 462 PANTHER PTHR23135:SF17 1 449 2.2E-238 T 22-04-2016 R615_RS12320 8e291fd21656879c3d8e249b2900871b 188 Pfam PF04955 HupE / UreJ protein 9 185 1.9E-52 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein R615_RS12320 8e291fd21656879c3d8e249b2900871b 188 PIRSF PIRSF016919 1 188 1.0E-51 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein R615_RS01375 992681b03d72240154911b1698bae37c 377 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS01375 992681b03d72240154911b1698bae37c 377 SUPERFAMILY SSF52540 20 261 2.48E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01375 992681b03d72240154911b1698bae37c 377 SMART SM00382 45 228 1.9E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS01375 992681b03d72240154911b1698bae37c 377 Pfam PF00005 ABC transporter 37 178 4.0E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS01375 992681b03d72240154911b1698bae37c 377 Pfam PF08402 TOBE domain 296 375 1.6E-16 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 R615_RS01375 992681b03d72240154911b1698bae37c 377 PANTHER PTHR24220:SF481 22 332 1.4E-158 T 22-04-2016 R615_RS01375 992681b03d72240154911b1698bae37c 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 51 375 1.2E-127 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 R615_RS01375 992681b03d72240154911b1698bae37c 377 Gene3D G3DSA:3.40.50.300 14 255 1.8E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS01375 992681b03d72240154911b1698bae37c 377 SUPERFAMILY SSF50331 254 374 2.14E-18 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal R615_RS01375 992681b03d72240154911b1698bae37c 377 PANTHER PTHR24220 22 332 1.4E-158 T 22-04-2016 R615_RS02600 f362575d310bf1586ff33be1ddbc2fef 281 PANTHER PTHR31459 25 245 1.8E-16 T 22-04-2016 R615_RS02600 f362575d310bf1586ff33be1ddbc2fef 281 SMART SM00769 159 276 1.7E-7 T 22-04-2016 IPR013990 Water stress and hypersensitive response domain GO:0009269 R615_RS02600 f362575d310bf1586ff33be1ddbc2fef 281 SMART SM00769 32 150 2.4E-14 T 22-04-2016 IPR013990 Water stress and hypersensitive response domain GO:0009269 R615_RS02600 f362575d310bf1586ff33be1ddbc2fef 281 ProDom PD010978 LATE EMBRYOGENESIS ABUNDANT DESICCATION SIMILAR PROTECTANT PROTEINS RELATED EMBRYOGENESIS-ABUNDANT EMBRYOGENESIS-LIKE 29 157 4.0E-9 T 22-04-2016 R615_RS02600 f362575d310bf1586ff33be1ddbc2fef 281 SUPERFAMILY SSF117070 8 158 5.23E-30 T 22-04-2016 R615_RS02600 f362575d310bf1586ff33be1ddbc2fef 281 Gene3D G3DSA:2.60.40.10 37 158 4.1E-12 T 22-04-2016 IPR013783 Immunoglobulin-like fold R615_RS02600 f362575d310bf1586ff33be1ddbc2fef 281 Gene3D G3DSA:2.60.40.10 159 258 1.0E-10 T 22-04-2016 IPR013783 Immunoglobulin-like fold R615_RS02600 f362575d310bf1586ff33be1ddbc2fef 281 SUPERFAMILY SSF117070 152 273 8.24E-18 T 22-04-2016 R615_RS02600 f362575d310bf1586ff33be1ddbc2fef 281 Pfam PF03168 Late embryogenesis abundant protein 53 148 6.8E-11 T 22-04-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 R615_RS02600 f362575d310bf1586ff33be1ddbc2fef 281 Pfam PF03168 Late embryogenesis abundant protein 180 258 1.8E-10 T 22-04-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 R615_RS12985 99910e23d9b148750f7e2045b876f276 313 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 313 1.1E-122 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 R615_RS12985 99910e23d9b148750f7e2045b876f276 313 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 313 49.489 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 R615_RS12985 99910e23d9b148750f7e2045b876f276 313 Gene3D G3DSA:3.40.50.2020 2 159 1.1E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS12985 99910e23d9b148750f7e2045b876f276 313 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 R615_RS12985 99910e23d9b148750f7e2045b876f276 313 SMART SM01400 4 121 9.6E-76 T 22-04-2016 R615_RS12985 99910e23d9b148750f7e2045b876f276 313 Gene3D G3DSA:3.40.50.2020 160 283 3.1E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS12985 99910e23d9b148750f7e2045b876f276 313 Pfam PF14572 Phosphoribosyl synthetase-associated domain 203 313 5.3E-27 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 R615_RS12985 99910e23d9b148750f7e2045b876f276 313 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 4.1E-47 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 R615_RS12985 99910e23d9b148750f7e2045b876f276 313 PANTHER PTHR10210:SF41 2 313 5.8E-182 T 22-04-2016 R615_RS12985 99910e23d9b148750f7e2045b876f276 313 PANTHER PTHR10210 2 313 5.8E-182 T 22-04-2016 R615_RS12985 99910e23d9b148750f7e2045b876f276 313 SUPERFAMILY SSF53271 69 305 1.07E-64 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS05645 83688c2ae34bbd7ecfb1b081f737a564 238 Pfam PF00849 RNA pseudouridylate synthase 33 187 4.1E-26 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS05645 83688c2ae34bbd7ecfb1b081f737a564 238 PANTHER PTHR11079 25 227 3.2E-45 T 22-04-2016 R615_RS05645 83688c2ae34bbd7ecfb1b081f737a564 238 SUPERFAMILY SSF55120 25 231 9.28E-52 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS05645 83688c2ae34bbd7ecfb1b081f737a564 238 PANTHER PTHR11079:SF86 25 227 3.2E-45 T 22-04-2016 R615_RS05195 c317605af3417722295c8c0f05ae2a6d 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 R615_RS05195 c317605af3417722295c8c0f05ae2a6d 376 PANTHER PTHR23409:SF23 197 376 2.3E-221 T 22-04-2016 R615_RS05195 c317605af3417722295c8c0f05ae2a6d 376 PANTHER PTHR23409:SF23 1 173 2.3E-221 T 22-04-2016 R615_RS05195 c317605af3417722295c8c0f05ae2a6d 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 1.6E-51 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 R615_RS05195 c317605af3417722295c8c0f05ae2a6d 376 PANTHER PTHR23409 197 376 2.3E-221 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 R615_RS05195 c317605af3417722295c8c0f05ae2a6d 376 PANTHER PTHR23409 1 173 2.3E-221 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 R615_RS05195 c317605af3417722295c8c0f05ae2a6d 376 Gene3D G3DSA:1.10.620.20 3 340 1.8E-117 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 R615_RS05195 c317605af3417722295c8c0f05ae2a6d 376 SUPERFAMILY SSF47240 3 341 5.77E-110 T 22-04-2016 IPR009078 Ferritin-like superfamily R615_RS08265 472704c17e40a1a9d478d123f5127510 558 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 110 5.9E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 329 399 1.9E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 Gene3D G3DSA:3.90.480.10 48 117 2.7E-34 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 Gene3D G3DSA:3.90.480.10 322 404 2.7E-34 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 413 553 1.5E-8 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 274 1.6E-41 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 PANTHER PTHR11493:SF47 1 295 7.4E-149 T 22-04-2016 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 PANTHER PTHR11493:SF47 328 555 7.4E-149 T 22-04-2016 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 PANTHER PTHR11493 1 295 7.4E-149 T 22-04-2016 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 PANTHER PTHR11493 328 555 7.4E-149 T 22-04-2016 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 Gene3D G3DSA:3.30.413.10 409 554 3.8E-33 T 22-04-2016 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 SUPERFAMILY SSF55124 1 125 2.45E-27 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 SUPERFAMILY SSF56014 120 284 1.07E-44 T 22-04-2016 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 SUPERFAMILY SSF56014 410 554 1.96E-36 T 22-04-2016 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 SUPERFAMILY SSF55124 253 277 3.27E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 SUPERFAMILY SSF55124 316 422 3.27E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 R615_RS08265 472704c17e40a1a9d478d123f5127510 558 Gene3D G3DSA:3.30.413.10 120 274 5.4E-41 T 22-04-2016 R615_RS02695 67f5f81dfc33e37d54aa1266e943caa3 755 SUPERFAMILY SSF82171 292 607 5.89E-8 T 22-04-2016 R615_RS02695 67f5f81dfc33e37d54aa1266e943caa3 755 Gene3D G3DSA:2.120.10.30 499 593 2.7E-5 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like R615_RS02695 67f5f81dfc33e37d54aa1266e943caa3 755 Gene3D G3DSA:2.120.10.30 345 452 2.7E-5 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like R615_RS08770 060d622bdc307dc3199646f9256841d3 603 Pfam PF07731 Multicopper oxidase 490 602 6.7E-23 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 R615_RS08770 060d622bdc307dc3199646f9256841d3 603 PANTHER PTHR11709:SF33 255 367 1.0E-97 T 22-04-2016 R615_RS08770 060d622bdc307dc3199646f9256841d3 603 PANTHER PTHR11709:SF33 453 602 1.0E-97 T 22-04-2016 R615_RS08770 060d622bdc307dc3199646f9256841d3 603 PANTHER PTHR11709:SF33 56 214 1.0E-97 T 22-04-2016 R615_RS08770 060d622bdc307dc3199646f9256841d3 603 Gene3D G3DSA:2.60.40.420 465 602 1.5E-39 T 22-04-2016 IPR008972 Cupredoxin R615_RS08770 060d622bdc307dc3199646f9256841d3 603 SUPERFAMILY SSF49503 55 199 7.4E-42 T 22-04-2016 IPR008972 Cupredoxin R615_RS08770 060d622bdc307dc3199646f9256841d3 603 SUPERFAMILY SSF49503 443 602 2.26E-31 T 22-04-2016 IPR008972 Cupredoxin R615_RS08770 060d622bdc307dc3199646f9256841d3 603 ProSitePatterns PS00080 Multicopper oxidases signature 2. 585 596 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 R615_RS08770 060d622bdc307dc3199646f9256841d3 603 Pfam PF07732 Multicopper oxidase 60 171 1.1E-40 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 R615_RS08770 060d622bdc307dc3199646f9256841d3 603 ProSitePatterns PS00079 Multicopper oxidases signature 1. 580 600 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site R615_RS08770 060d622bdc307dc3199646f9256841d3 603 ProSitePatterns PS00079 Multicopper oxidases signature 1. 145 165 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site R615_RS08770 060d622bdc307dc3199646f9256841d3 603 SUPERFAMILY SSF49503 176 384 8.31E-52 T 22-04-2016 IPR008972 Cupredoxin R615_RS08770 060d622bdc307dc3199646f9256841d3 603 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 10 602 1.5E-276 T 22-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 R615_RS08770 060d622bdc307dc3199646f9256841d3 603 Gene3D G3DSA:2.60.40.420 52 168 5.8E-36 T 22-04-2016 IPR008972 Cupredoxin R615_RS08770 060d622bdc307dc3199646f9256841d3 603 PANTHER PTHR11709 255 367 1.0E-97 T 22-04-2016 R615_RS08770 060d622bdc307dc3199646f9256841d3 603 PANTHER PTHR11709 453 602 1.0E-97 T 22-04-2016 R615_RS08770 060d622bdc307dc3199646f9256841d3 603 PANTHER PTHR11709 56 214 1.0E-97 T 22-04-2016 R615_RS08770 060d622bdc307dc3199646f9256841d3 603 Pfam PF00394 Multicopper oxidase 180 356 1.3E-29 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 R615_RS08770 060d622bdc307dc3199646f9256841d3 603 Gene3D G3DSA:2.60.40.420 178 379 3.3E-48 T 22-04-2016 IPR008972 Cupredoxin R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 PIRSF PIRSF002111 1 534 6.7E-210 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 Gene3D G3DSA:2.40.50.140 444 521 6.9E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 Gene3D G3DSA:2.40.50.140 102 172 8.6E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 SUPERFAMILY SSF50249 1 112 3.35E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 SUPERFAMILY SSF50249 88 174 8.21E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 SUPERFAMILY SSF50249 189 276 3.73E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 Gene3D G3DSA:2.40.50.140 364 443 1.2E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.6E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.6E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.6E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.6E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.6E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.6E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.6E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.6E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.6E-88 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 PANTHER PTHR10724 1 514 3.0E-256 T 22-04-2016 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 SUPERFAMILY SSF50249 342 441 7.01E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 8.2E-211 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 SMART SM00316 103 171 1.0E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 SMART SM00316 19 87 2.2E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 SMART SM00316 275 347 9.6E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 SMART SM00316 449 520 1.2E-16 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 SMART SM00316 362 434 2.7E-20 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 SMART SM00316 190 260 4.7E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 SUPERFAMILY SSF50249 429 532 1.34E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 Pfam PF00575 S1 RNA binding domain 190 260 9.0E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 Pfam PF00575 S1 RNA binding domain 450 520 1.6E-13 T 22-04-2016 IPR003029 S1 domain GO:0003676 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 Pfam PF00575 S1 RNA binding domain 275 347 1.8E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 Pfam PF00575 S1 RNA binding domain 19 85 2.3E-4 T 22-04-2016 IPR003029 S1 domain GO:0003676 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 Pfam PF00575 S1 RNA binding domain 103 171 8.5E-9 T 22-04-2016 IPR003029 S1 domain GO:0003676 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 Pfam PF00575 S1 RNA binding domain 362 434 3.4E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 Gene3D G3DSA:2.40.50.140 280 363 1.9E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 Gene3D G3DSA:2.40.50.140 192 279 8.4E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 Gene3D G3DSA:2.40.50.140 21 101 1.1E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 SUPERFAMILY SSF50249 255 356 4.03E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS06110 0b00b6d5bf704c35ae107050fc4cbe51 560 PANTHER PTHR10724:SF6 1 514 3.0E-256 T 22-04-2016 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 PANTHER PTHR22594:SF4 3 504 1.5E-249 T 22-04-2016 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 SUPERFAMILY SSF50249 9 149 4.9E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 12 504 7.6E-194 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 Gene3D G3DSA:2.40.50.140 12 148 2.8E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 9.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 387 403 9.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 9.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 9.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 9.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 502 1.3E-81 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 Pfam PF01336 OB-fold nucleic acid binding domain 66 135 6.4E-7 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 SUPERFAMILY SSF55681 156 503 1.11E-116 T 22-04-2016 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 PANTHER PTHR22594 3 504 1.5E-249 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 17 507 42.058 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 R615_RS04920 1f8c7371ef0139d5953fd4f2cbf452c1 507 Gene3D G3DSA:3.30.930.10 151 501 3.9E-117 T 22-04-2016 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 Pfam PF00158 Sigma-54 interaction domain 137 302 2.2E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 SMART SM00382 156 299 6.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 Gene3D G3DSA:3.40.50.2300 8 123 4.7E-33 T 22-04-2016 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 PANTHER PTHR32071 7 453 8.7E-206 T 22-04-2016 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 Pfam PF02954 Bacterial regulatory protein, Fis family 410 450 8.5E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 453 7.5E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 416 433 7.5E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 PANTHER PTHR32071:SF28 7 453 8.7E-206 T 22-04-2016 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 Gene3D G3DSA:3.40.50.300 134 307 6.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 SMART SM00448 5 116 4.4E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 Gene3D G3DSA:1.10.8.60 309 377 4.5E-23 T 22-04-2016 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 SUPERFAMILY SSF46689 350 453 3.67E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 Gene3D G3DSA:1.10.10.60 402 453 1.4E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 Pfam PF00072 Response regulator receiver domain 8 116 4.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 SUPERFAMILY SSF52172 6 179 5.98E-40 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 R615_RS03280 7d0bcb9b59d87d0e782e83827098f547 453 SUPERFAMILY SSF52540 136 377 4.21E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17705 4f3e9e61e37d7f2e9e6cda42877e452a 284 Gene3D G3DSA:3.30.70.900 34 131 1.0E-18 T 22-04-2016 R615_RS17705 4f3e9e61e37d7f2e9e6cda42877e452a 284 SUPERFAMILY SSF54909 35 125 1.45E-13 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel R615_RS17705 4f3e9e61e37d7f2e9e6cda42877e452a 284 Pfam PF07045 Domain of unknown function (DUF1330) 35 129 2.9E-19 T 22-04-2016 IPR010753 Domain of unknown function DUF1330 R615_RS08980 ea484e8f1e02d01ee8b8e59bce5b347e 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 3.5E-38 T 22-04-2016 IPR021724 Protein of unknown function DUF3297 R615_RS06985 7c15d3326a8bb28ff4af84d1b65fd135 204 Gene3D G3DSA:3.40.1550.10 7 200 2.6E-38 T 22-04-2016 IPR028976 CheC-like domain R615_RS06985 7c15d3326a8bb28ff4af84d1b65fd135 204 SUPERFAMILY SSF103039 6 200 1.31E-45 T 22-04-2016 IPR028976 CheC-like domain R615_RS01855 fdf8c383326014444b00e2dd194e4fa1 198 SUPERFAMILY SSF50022 30 195 4.33E-41 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 R615_RS01855 fdf8c383326014444b00e2dd194e4fa1 198 PANTHER PTHR10134 1 196 1.3E-87 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 R615_RS01855 fdf8c383326014444b00e2dd194e4fa1 198 Gene3D G3DSA:1.20.5.510 4 39 1.5E-7 T 22-04-2016 R615_RS01855 fdf8c383326014444b00e2dd194e4fa1 198 Gene3D G3DSA:2.102.10.10 49 191 3.5E-36 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 R615_RS01855 fdf8c383326014444b00e2dd194e4fa1 198 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 192 1.5E-66 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 R615_RS01855 fdf8c383326014444b00e2dd194e4fa1 198 Pfam PF00355 Rieske [2Fe-2S] domain 54 178 1.9E-10 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 R615_RS01855 fdf8c383326014444b00e2dd194e4fa1 198 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 2 40 1.4E-13 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 R615_RS01855 fdf8c383326014444b00e2dd194e4fa1 198 PANTHER PTHR10134:SF8 1 196 1.3E-87 T 22-04-2016 R615_RS01855 fdf8c383326014444b00e2dd194e4fa1 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 151 163 6.4E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 R615_RS01855 fdf8c383326014444b00e2dd194e4fa1 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 120 131 6.4E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 R615_RS14045 809e4c3ff15da5eae4306372435a8473 288 SUPERFAMILY SSF56645 64 148 9.77E-7 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 R615_RS07345 3e20d1e577be0952da3a6a8afcb49908 182 SMART SM01322 1 176 3.8E-116 T 22-04-2016 IPR009822 YaeQ R615_RS07345 3e20d1e577be0952da3a6a8afcb49908 182 SUPERFAMILY SSF52980 4 178 3.22E-74 T 22-04-2016 IPR011335 Restriction endonuclease type II-like R615_RS07345 3e20d1e577be0952da3a6a8afcb49908 182 PANTHER PTHR38784 1 182 1.1E-83 T 22-04-2016 R615_RS07345 3e20d1e577be0952da3a6a8afcb49908 182 PIRSF PIRSF011484 1 181 1.1E-73 T 22-04-2016 IPR009822 YaeQ R615_RS07345 3e20d1e577be0952da3a6a8afcb49908 182 Gene3D G3DSA:3.10.640.10 1 179 4.0E-82 T 22-04-2016 R615_RS07345 3e20d1e577be0952da3a6a8afcb49908 182 Pfam PF07152 YaeQ protein 1 173 3.0E-78 T 22-04-2016 IPR009822 YaeQ R615_RS07345 3e20d1e577be0952da3a6a8afcb49908 182 PANTHER PTHR38784:SF1 1 182 1.1E-83 T 22-04-2016 R615_RS04745 54a7144824858f0bd79426c100100359 164 PIRSF PIRSF037599 9 160 9.1E-64 T 22-04-2016 IPR028613 GDP-mannose mannosyl hydrolase Gmm GO:0000287|GO:0008727 R615_RS04745 54a7144824858f0bd79426c100100359 164 PANTHER PTHR22769 22 155 3.6E-42 T 22-04-2016 R615_RS04745 54a7144824858f0bd79426c100100359 164 PANTHER PTHR22769:SF31 22 155 3.6E-42 T 22-04-2016 R615_RS04745 54a7144824858f0bd79426c100100359 164 Pfam PF00293 NUDIX domain 26 142 2.4E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 R615_RS04745 54a7144824858f0bd79426c100100359 164 SUPERFAMILY SSF55811 14 157 1.29E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS04745 54a7144824858f0bd79426c100100359 164 Gene3D G3DSA:3.90.79.10 14 153 2.8E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS04935 8348fa198bc5d98051889d26f3d491da 152 SUPERFAMILY SSF101116 7 125 1.19E-37 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 R615_RS04935 8348fa198bc5d98051889d26f3d491da 152 PANTHER PTHR34773 1 144 1.2E-39 T 22-04-2016 R615_RS04935 8348fa198bc5d98051889d26f3d491da 152 Pfam PF02561 Flagellar protein FliS 7 123 1.2E-35 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 R615_RS04935 8348fa198bc5d98051889d26f3d491da 152 Gene3D G3DSA:1.20.120.340 7 126 1.8E-38 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 R615_RS04935 8348fa198bc5d98051889d26f3d491da 152 PIRSF PIRSF039090 1 132 6.2E-45 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 R615_RS04935 8348fa198bc5d98051889d26f3d491da 152 TIGRFAM TIGR00208 fliS: flagellar protein FliS 3 122 1.5E-25 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 R615_RS09100 647b6dbb244decf460ce04fa7c1eb592 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 6 290 1.5E-100 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 R615_RS09100 647b6dbb244decf460ce04fa7c1eb592 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 309 1.8E-23 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain R615_RS09100 647b6dbb244decf460ce04fa7c1eb592 312 SUPERFAMILY SSF52151 7 123 3.92E-64 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 R615_RS09100 647b6dbb244decf460ce04fa7c1eb592 312 SUPERFAMILY SSF52151 191 305 3.92E-64 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 R615_RS09100 647b6dbb244decf460ce04fa7c1eb592 312 PIRSF PIRSF000446 1 310 5.2E-102 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 R615_RS09100 647b6dbb244decf460ce04fa7c1eb592 312 Pfam PF00698 Acyl transferase domain 8 279 2.4E-29 T 22-04-2016 IPR014043 Acyl transferase R615_RS09100 647b6dbb244decf460ce04fa7c1eb592 312 Gene3D G3DSA:3.30.70.250 126 197 9.9E-28 T 22-04-2016 R615_RS09100 647b6dbb244decf460ce04fa7c1eb592 312 SUPERFAMILY SSF55048 129 198 2.49E-17 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 R615_RS09100 647b6dbb244decf460ce04fa7c1eb592 312 PANTHER PTHR10982 1 310 2.0E-128 T 22-04-2016 R615_RS09100 647b6dbb244decf460ce04fa7c1eb592 312 Gene3D G3DSA:3.40.366.10 3 123 4.6E-61 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 R615_RS09100 647b6dbb244decf460ce04fa7c1eb592 312 Gene3D G3DSA:3.40.366.10 198 296 4.6E-61 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 R615_RS10890 949a67ab2e8d6601e0c48040c662338c 163 PRINTS PR01021 OMPA domain signature 95 110 2.7E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 R615_RS10890 949a67ab2e8d6601e0c48040c662338c 163 PRINTS PR01021 OMPA domain signature 65 87 2.7E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 R615_RS10890 949a67ab2e8d6601e0c48040c662338c 163 PRINTS PR01021 OMPA domain signature 110 126 2.7E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 R615_RS10890 949a67ab2e8d6601e0c48040c662338c 163 Pfam PF00691 OmpA family 64 142 1.0E-14 T 22-04-2016 IPR006665 OmpA-like domain R615_RS10890 949a67ab2e8d6601e0c48040c662338c 163 SUPERFAMILY SSF103088 40 159 1.1E-23 T 22-04-2016 IPR006665 OmpA-like domain R615_RS10890 949a67ab2e8d6601e0c48040c662338c 163 Gene3D G3DSA:3.30.1330.60 61 160 2.5E-21 T 22-04-2016 IPR006665 OmpA-like domain R615_RS10890 949a67ab2e8d6601e0c48040c662338c 163 PANTHER PTHR30128 33 160 2.3E-20 T 22-04-2016 R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 SUPERFAMILY SSF51735 1 275 9.74E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 PANTHER PTHR24322:SF365 11 139 1.5E-60 T 22-04-2016 R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 PANTHER PTHR24322:SF365 155 189 1.5E-60 T 22-04-2016 R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.4E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.4E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.4E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.4E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.4E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 PANTHER PTHR24322 11 139 1.5E-60 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 PANTHER PTHR24322 155 189 1.5E-60 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 Gene3D G3DSA:3.40.50.720 6 274 3.0E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS14540 885df9eaf761275df6eec80281f2ba69 284 Pfam PF00106 short chain dehydrogenase 7 199 2.3E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 SUPERFAMILY SSF51338 429 484 1.73E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 ProSitePatterns PS00145 Urease active site. 323 339 - T 22-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 PANTHER PTHR22642 31 302 2.5E-262 T 22-04-2016 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 PANTHER PTHR22642 326 508 2.5E-262 T 22-04-2016 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 Pfam PF00449 Urease alpha-subunit, N-terminal domain 9 125 9.4E-56 T 22-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 ProSitePatterns PS01120 Urease nickel ligands signature. 133 146 - T 22-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 SUPERFAMILY SSF51338 9 183 3.12E-62 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 PANTHER PTHR22642:SF7 31 302 2.5E-262 T 22-04-2016 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 PANTHER PTHR22642:SF7 326 508 2.5E-262 T 22-04-2016 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 10 574 3.4E-296 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 Hamap MF_01953 Urease subunit alpha [ureC]. 8 574 56.562 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 Gene3D G3DSA:3.20.20.140 150 436 2.8E-209 T 22-04-2016 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 Gene3D G3DSA:3.20.20.140 495 571 2.8E-209 T 22-04-2016 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 434 447 1.42E-33 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 301 318 1.42E-33 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 340 356 1.42E-33 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 408 423 1.42E-33 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 Gene3D G3DSA:2.30.40.10 73 149 1.8E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 Pfam PF01979 Amidohydrolase family 131 461 2.1E-81 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 SUPERFAMILY SSF51556 487 574 1.49E-197 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS12300 4b432c6379b890cf58101ffb94aed7e5 574 SUPERFAMILY SSF51556 136 438 1.49E-197 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS07445 586e1602b1d2c3ffdb793ed8b0818d62 287 SMART SM00849 14 205 3.1E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS07445 586e1602b1d2c3ffdb793ed8b0818d62 287 SUPERFAMILY SSF56281 14 286 2.8E-41 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS07445 586e1602b1d2c3ffdb793ed8b0818d62 287 Gene3D G3DSA:3.60.15.10 4 248 2.2E-41 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS07445 586e1602b1d2c3ffdb793ed8b0818d62 287 Pfam PF00753 Metallo-beta-lactamase superfamily 26 205 3.7E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS07445 586e1602b1d2c3ffdb793ed8b0818d62 287 PANTHER PTHR11935:SF110 1 282 1.0E-75 T 22-04-2016 R615_RS07445 586e1602b1d2c3ffdb793ed8b0818d62 287 PANTHER PTHR11935 1 282 1.0E-75 T 22-04-2016 R615_RS09220 92e2578e55294c274142e978ed63ba2f 297 Pfam PF03412 Peptidase C39 family 44 179 3.1E-16 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 R615_RS03675 9e942b11b1d3df97b9519d7dff1d749c 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 216 9.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS03675 9e942b11b1d3df97b9519d7dff1d749c 227 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 220 1.3E-72 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 R615_RS03675 9e942b11b1d3df97b9519d7dff1d749c 227 Gene3D G3DSA:1.10.3720.10 8 221 1.4E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS03675 9e942b11b1d3df97b9519d7dff1d749c 227 PANTHER PTHR30183 1 221 6.3E-67 T 22-04-2016 R615_RS03675 9e942b11b1d3df97b9519d7dff1d749c 227 SUPERFAMILY SSF161098 7 218 2.09E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS10095 6fd4494129e9bae17187756236b2f5a8 210 SUPERFAMILY SSF52540 3 204 4.85E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10095 6fd4494129e9bae17187756236b2f5a8 210 PANTHER PTHR36978:SF2 3 205 8.3E-82 T 22-04-2016 R615_RS10095 6fd4494129e9bae17187756236b2f5a8 210 PANTHER PTHR36978 3 205 8.3E-82 T 22-04-2016 R615_RS05370 1b9d7f526bdbd8c75ac6d1750c0c83d9 164 Pfam PF03938 Outer membrane protein (OmpH-like) 7 161 8.1E-25 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 R615_RS05370 1b9d7f526bdbd8c75ac6d1750c0c83d9 164 PANTHER PTHR35089 2 164 2.5E-27 T 22-04-2016 R615_RS05370 1b9d7f526bdbd8c75ac6d1750c0c83d9 164 PANTHER PTHR35089:SF1 2 164 2.5E-27 T 22-04-2016 R615_RS05370 1b9d7f526bdbd8c75ac6d1750c0c83d9 164 SUPERFAMILY SSF111384 18 162 4.58E-26 T 22-04-2016 IPR024930 Skp domain R615_RS05370 1b9d7f526bdbd8c75ac6d1750c0c83d9 164 Gene3D G3DSA:3.30.910.20 10 56 2.7E-17 T 22-04-2016 R615_RS05370 1b9d7f526bdbd8c75ac6d1750c0c83d9 164 Gene3D G3DSA:3.30.910.20 94 162 2.7E-17 T 22-04-2016 R615_RS05370 1b9d7f526bdbd8c75ac6d1750c0c83d9 164 SMART SM00935 8 162 1.5E-32 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 R615_RS01690 4ee0b57c4fd2a4bc315d90f59413b90c 494 PANTHER PTHR35565 1 494 4.9E-239 T 22-04-2016 R615_RS01690 4ee0b57c4fd2a4bc315d90f59413b90c 494 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 491 1.1E-209 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath R615_RS01690 4ee0b57c4fd2a4bc315d90f59413b90c 494 PANTHER PTHR35565:SF3 1 494 4.9E-239 T 22-04-2016 R615_RS01690 4ee0b57c4fd2a4bc315d90f59413b90c 494 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 491 2.4E-192 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath R615_RS16765 3bee66c96e14b68d1836fc0fe6bf90b3 137 PANTHER PTHR35813:SF1 1 136 5.3E-39 T 22-04-2016 R615_RS16765 3bee66c96e14b68d1836fc0fe6bf90b3 137 PIRSF PIRSF016789 12 133 6.5E-36 T 22-04-2016 IPR007401 Protein of unknown function DUF454 R615_RS16765 3bee66c96e14b68d1836fc0fe6bf90b3 137 PANTHER PTHR35813 1 136 5.3E-39 T 22-04-2016 R615_RS16765 3bee66c96e14b68d1836fc0fe6bf90b3 137 Pfam PF04304 Protein of unknown function (DUF454) 13 128 2.4E-37 T 22-04-2016 IPR007401 Protein of unknown function DUF454 R615_RS00195 0925fa737a8ff043776709ce3fbe80ed 269 PANTHER PTHR30520 1 262 1.7E-68 T 22-04-2016 R615_RS00195 0925fa737a8ff043776709ce3fbe80ed 269 Gene3D G3DSA:1.20.1080.10 24 260 1.8E-66 T 22-04-2016 IPR023271 Aquaporin-like R615_RS00195 0925fa737a8ff043776709ce3fbe80ed 269 Pfam PF01226 Formate/nitrite transporter 8 257 1.3E-64 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 R615_RS13440 d122b977e277b476d0cc154885a85bbf 374 PANTHER PTHR30294 1 373 1.3E-146 T 22-04-2016 R615_RS13440 d122b977e277b476d0cc154885a85bbf 374 Pfam PF12698 ABC-2 family transporter protein 24 363 1.2E-35 T 22-04-2016 R615_RS13440 d122b977e277b476d0cc154885a85bbf 374 PANTHER PTHR30294:SF22 1 373 1.3E-146 T 22-04-2016 R615_RS09465 376f7405e2d1139c9e96b339bef7484f 593 Pfam PF00005 ABC transporter 353 502 5.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS09465 376f7405e2d1139c9e96b339bef7484f 593 Pfam PF00664 ABC transporter transmembrane region 16 291 3.4E-32 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 R615_RS09465 376f7405e2d1139c9e96b339bef7484f 593 PANTHER PTHR24221:SF250 1 586 1.2E-282 T 22-04-2016 R615_RS09465 376f7405e2d1139c9e96b339bef7484f 593 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS09465 376f7405e2d1139c9e96b339bef7484f 593 SUPERFAMILY SSF90123 4 319 2.88E-58 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 R615_RS09465 376f7405e2d1139c9e96b339bef7484f 593 PANTHER PTHR24221 1 586 1.2E-282 T 22-04-2016 R615_RS09465 376f7405e2d1139c9e96b339bef7484f 593 Gene3D G3DSA:1.20.1560.10 4 319 3.7E-59 T 22-04-2016 R615_RS09465 376f7405e2d1139c9e96b339bef7484f 593 SUPERFAMILY SSF52540 329 572 1.09E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS09465 376f7405e2d1139c9e96b339bef7484f 593 SMART SM00382 362 554 1.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS09465 376f7405e2d1139c9e96b339bef7484f 593 Gene3D G3DSA:3.40.50.300 336 566 2.1E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 SUPERFAMILY SSF56037 342 432 1.91E-16 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 PANTHER PTHR11807:SF2 17 423 1.6E-72 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 320 23.371 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 Pfam PF11734 TilS substrate C-terminal domain 377 430 4.8E-17 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 SUPERFAMILY SSF82829 259 328 4.97E-20 T 22-04-2016 R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 378 414 5.5E-12 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 Pfam PF09179 TilS substrate binding domain 259 325 3.2E-17 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 23 206 9.6E-55 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 Pfam PF01171 PP-loop family 24 203 1.3E-55 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 SUPERFAMILY SSF52402 16 236 1.54E-58 T 22-04-2016 R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 PANTHER PTHR11807 17 423 1.6E-72 T 22-04-2016 R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 SMART SM00977 370 439 1.1E-13 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 R615_RS13380 f2dd3488a9f676bd4e11d679a639e5be 441 Gene3D G3DSA:3.40.50.620 20 182 4.4E-16 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS16150 e2911e2f3cc150513f11b97471d45340 194 PANTHER PTHR19136:SF81 2 186 4.0E-23 T 22-04-2016 R615_RS16150 e2911e2f3cc150513f11b97471d45340 194 Gene3D G3DSA:3.90.550.10 1 190 2.8E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS16150 e2911e2f3cc150513f11b97471d45340 194 SUPERFAMILY SSF53448 1 122 3.13E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS16150 e2911e2f3cc150513f11b97471d45340 194 Pfam PF12804 MobA-like NTP transferase domain 5 119 6.4E-26 T 22-04-2016 IPR025877 MobA-like NTP transferase R615_RS16150 e2911e2f3cc150513f11b97471d45340 194 PANTHER PTHR19136 2 186 4.0E-23 T 22-04-2016 R615_RS08520 0d27246b0b92ab1d8ccb32908c0e3def 115 SUPERFAMILY SSF75169 1 113 4.71E-21 T 22-04-2016 IPR027396 DsrEFH-like R615_RS08520 0d27246b0b92ab1d8ccb32908c0e3def 115 Pfam PF02635 DsrE/DsrF-like family 2 114 3.9E-14 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein R615_RS08520 0d27246b0b92ab1d8ccb32908c0e3def 115 Gene3D G3DSA:3.40.1260.10 2 114 1.0E-21 T 22-04-2016 IPR027396 DsrEFH-like R615_RS08520 0d27246b0b92ab1d8ccb32908c0e3def 115 PANTHER PTHR38780:SF1 1 115 1.4E-12 T 22-04-2016 R615_RS08520 0d27246b0b92ab1d8ccb32908c0e3def 115 PANTHER PTHR38780 1 115 1.4E-12 T 22-04-2016 R615_RS11325 3f26cf09be160f51820c9b9fc3131f26 509 Pfam PF03806 AbgT putative transporter family 14 508 5.4E-185 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 R615_RS11325 3f26cf09be160f51820c9b9fc3131f26 509 PANTHER PTHR30282:SF0 1 508 1.2E-222 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 R615_RS11325 3f26cf09be160f51820c9b9fc3131f26 509 PANTHER PTHR30282 1 508 1.2E-222 T 22-04-2016 R615_RS08085 24e3c3e6fc8b93bb61b99d91b8b3583f 164 SUPERFAMILY SSF50891 2 163 4.53E-57 T 22-04-2016 IPR029000 Cyclophilin-like domain R615_RS08085 24e3c3e6fc8b93bb61b99d91b8b3583f 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 R615_RS08085 24e3c3e6fc8b93bb61b99d91b8b3583f 164 PANTHER PTHR11071:SF192 1 164 3.0E-72 T 22-04-2016 R615_RS08085 24e3c3e6fc8b93bb61b99d91b8b3583f 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 161 2.3E-47 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 R615_RS08085 24e3c3e6fc8b93bb61b99d91b8b3583f 164 Gene3D G3DSA:2.40.100.10 2 163 2.0E-52 T 22-04-2016 IPR029000 Cyclophilin-like domain R615_RS08085 24e3c3e6fc8b93bb61b99d91b8b3583f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.8E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 R615_RS08085 24e3c3e6fc8b93bb61b99d91b8b3583f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.8E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 R615_RS08085 24e3c3e6fc8b93bb61b99d91b8b3583f 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.8E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 R615_RS08085 24e3c3e6fc8b93bb61b99d91b8b3583f 164 PANTHER PTHR11071 1 164 3.0E-72 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 R615_RS08085 24e3c3e6fc8b93bb61b99d91b8b3583f 164 PIRSF PIRSF001467 1 164 1.2E-28 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 Pfam PF01568 Molydopterin dinucleotide binding domain 623 723 9.3E-13 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 SUPERFAMILY SSF50692 616 727 6.33E-18 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 SUPERFAMILY SSF53706 38 614 7.59E-112 T 22-04-2016 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 18 727 8.2E-189 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 Gene3D G3DSA:3.40.50.740 108 180 3.3E-40 T 22-04-2016 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 Gene3D G3DSA:3.40.50.740 381 609 3.3E-40 T 22-04-2016 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 PANTHER PTHR11615:SF114 268 727 2.7E-152 T 22-04-2016 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 PANTHER PTHR11615:SF114 101 250 2.7E-152 T 22-04-2016 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 PIRSF PIRSF000144 3 729 4.8E-170 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 Pfam PF00384 Molybdopterin oxidoreductase 108 488 4.6E-33 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 Gene3D G3DSA:2.40.40.20 615 727 4.5E-13 T 22-04-2016 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 Gene3D G3DSA:3.40.228.10 181 380 1.9E-55 T 22-04-2016 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 PANTHER PTHR11615 268 727 2.7E-152 T 22-04-2016 R615_RS01910 cbc0d8444fcdaa12a1cce9a09b76c547 729 PANTHER PTHR11615 101 250 2.7E-152 T 22-04-2016 R615_RS16825 bb7fca1cc13e7cf1dd22f3b5233f3f67 278 Gene3D G3DSA:2.30.30.60 123 172 5.8E-20 T 22-04-2016 R615_RS16825 bb7fca1cc13e7cf1dd22f3b5233f3f67 278 PANTHER PTHR30221 14 277 2.1E-96 T 22-04-2016 R615_RS16825 bb7fca1cc13e7cf1dd22f3b5233f3f67 278 PANTHER PTHR30221:SF7 14 277 2.1E-96 T 22-04-2016 R615_RS16825 bb7fca1cc13e7cf1dd22f3b5233f3f67 278 Gene3D G3DSA:3.30.70.100 177 260 3.1E-34 T 22-04-2016 R615_RS16825 bb7fca1cc13e7cf1dd22f3b5233f3f67 278 Pfam PF05552 Conserved TM helix 22 57 4.7E-7 T 22-04-2016 IPR008910 Conserved TM helix R615_RS16825 bb7fca1cc13e7cf1dd22f3b5233f3f67 278 SUPERFAMILY SSF82861 22 106 1.83E-16 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 R615_RS16825 bb7fca1cc13e7cf1dd22f3b5233f3f67 278 SUPERFAMILY SSF82689 176 272 1.18E-35 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 R615_RS16825 bb7fca1cc13e7cf1dd22f3b5233f3f67 278 Pfam PF00924 Mechanosensitive ion channel 65 262 6.7E-58 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 R615_RS16825 bb7fca1cc13e7cf1dd22f3b5233f3f67 278 SUPERFAMILY SSF50182 107 173 8.83E-18 T 22-04-2016 IPR010920 LSM domain R615_RS16825 bb7fca1cc13e7cf1dd22f3b5233f3f67 278 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 137 171 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 R615_RS13930 dd34fd085fe0c26a7ca009a976e0d7db 327 Hamap MF_01497 Stress response kinase A [srkA]. 2 318 46.058 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 R615_RS13930 dd34fd085fe0c26a7ca009a976e0d7db 327 Gene3D G3DSA:3.90.1200.10 105 323 2.8E-41 T 22-04-2016 R615_RS13930 dd34fd085fe0c26a7ca009a976e0d7db 327 PANTHER PTHR39573:SF1 1 327 1.4E-133 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 R615_RS13930 dd34fd085fe0c26a7ca009a976e0d7db 327 Pfam PF01636 Phosphotransferase enzyme family 33 253 6.8E-32 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase R615_RS13930 dd34fd085fe0c26a7ca009a976e0d7db 327 SUPERFAMILY SSF56112 3 322 3.4E-74 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS13930 dd34fd085fe0c26a7ca009a976e0d7db 327 PANTHER PTHR39573 1 327 1.4E-133 T 22-04-2016 R615_RS06340 f83483f075e0ed0c0a4a7eda0ae781aa 203 Pfam PF01420 Type I restriction modification DNA specificity domain 2 169 3.7E-6 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 R615_RS06340 f83483f075e0ed0c0a4a7eda0ae781aa 203 SUPERFAMILY SSF116734 1 189 1.8E-25 T 22-04-2016 R615_RS06440 7156af24fea1d976d0c08956a4c62f0c 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 126 158 2.8E-10 T 22-04-2016 IPR001451 Hexapeptide repeat R615_RS06440 7156af24fea1d976d0c08956a4c62f0c 194 PIRSF PIRSF000441 3 193 3.0E-49 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 R615_RS06440 7156af24fea1d976d0c08956a4c62f0c 194 SUPERFAMILY SSF51161 40 176 7.76E-36 T 22-04-2016 IPR011004 Trimeric LpxA-like R615_RS06440 7156af24fea1d976d0c08956a4c62f0c 194 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 R615_RS06440 7156af24fea1d976d0c08956a4c62f0c 194 PANTHER PTHR23416 31 188 1.3E-29 T 22-04-2016 R615_RS06440 7156af24fea1d976d0c08956a4c62f0c 194 Gene3D G3DSA:2.160.10.10 73 190 3.7E-27 T 22-04-2016 R615_RS06440 7156af24fea1d976d0c08956a4c62f0c 194 PANTHER PTHR23416:SF55 31 188 1.3E-29 T 22-04-2016 R615_RS09975 35f923e102e6b07c9266c2c566872fec 673 PANTHER PTHR32331:SF3 2 652 0.0 T 22-04-2016 R615_RS09975 35f923e102e6b07c9266c2c566872fec 673 Pfam PF11842 Domain of unknown function (DUF3362) 566 657 8.6E-40 T 22-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal R615_RS09975 35f923e102e6b07c9266c2c566872fec 673 Pfam PF08497 Radical SAM N-terminal 2 351 2.5E-136 T 22-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal R615_RS09975 35f923e102e6b07c9266c2c566872fec 673 Gene3D G3DSA:3.80.30.20 346 614 4.7E-48 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe R615_RS09975 35f923e102e6b07c9266c2c566872fec 673 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 2 616 3.8E-256 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 R615_RS09975 35f923e102e6b07c9266c2c566872fec 673 SMART SM00729 348 598 1.8E-9 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 R615_RS09975 35f923e102e6b07c9266c2c566872fec 673 PANTHER PTHR32331 2 652 0.0 T 22-04-2016 R615_RS09975 35f923e102e6b07c9266c2c566872fec 673 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 352 372 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 R615_RS09975 35f923e102e6b07c9266c2c566872fec 673 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 1 659 45.773 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 R615_RS09975 35f923e102e6b07c9266c2c566872fec 673 Pfam PF04055 Radical SAM superfamily 352 557 4.2E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 R615_RS09975 35f923e102e6b07c9266c2c566872fec 673 SUPERFAMILY SSF102114 442 606 7.32E-14 T 22-04-2016 R615_RS09975 35f923e102e6b07c9266c2c566872fec 673 SUPERFAMILY SSF102114 345 412 7.32E-14 T 22-04-2016 R615_RS09835 e5794b992f43be001487958ee7d19d70 386 Gene3D G3DSA:1.10.3150.10 167 331 3.1E-44 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS09835 e5794b992f43be001487958ee7d19d70 386 PIRSF PIRSF003180 1 384 3.3E-90 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing R615_RS09835 e5794b992f43be001487958ee7d19d70 386 SMART SM00052 3 180 0.0022 T 22-04-2016 IPR001633 EAL domain R615_RS09835 e5794b992f43be001487958ee7d19d70 386 SUPERFAMILY SSF109604 166 376 3.08E-43 T 22-04-2016 R615_RS09835 e5794b992f43be001487958ee7d19d70 386 Gene3D G3DSA:3.20.20.450 63 166 7.8E-12 T 22-04-2016 IPR001633 EAL domain R615_RS09835 e5794b992f43be001487958ee7d19d70 386 SUPERFAMILY SSF141868 2 179 7.45E-24 T 22-04-2016 IPR001633 EAL domain R615_RS09835 e5794b992f43be001487958ee7d19d70 386 PANTHER PTHR33525 1 321 3.4E-70 T 22-04-2016 R615_RS09835 e5794b992f43be001487958ee7d19d70 386 Pfam PF08668 HDOD domain 183 303 2.8E-22 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS09835 e5794b992f43be001487958ee7d19d70 386 Pfam PF00563 EAL domain 49 175 6.2E-11 T 22-04-2016 IPR001633 EAL domain R615_RS09835 e5794b992f43be001487958ee7d19d70 386 PANTHER PTHR33525:SF4 1 321 3.4E-70 T 22-04-2016 R615_RS06205 58bce8f8e02bae09f86ba0caf7ad0f83 372 SUPERFAMILY SSF53383 12 371 5.67E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS06205 58bce8f8e02bae09f86ba0caf7ad0f83 372 PANTHER PTHR30244:SF13 1 372 1.5E-130 T 22-04-2016 R615_RS06205 58bce8f8e02bae09f86ba0caf7ad0f83 372 Gene3D G3DSA:3.90.1150.10 249 372 3.1E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS06205 58bce8f8e02bae09f86ba0caf7ad0f83 372 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 367 1.5E-118 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase R615_RS06205 58bce8f8e02bae09f86ba0caf7ad0f83 372 PIRSF PIRSF000390 2 372 9.5E-102 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase R615_RS06205 58bce8f8e02bae09f86ba0caf7ad0f83 372 Gene3D G3DSA:3.40.640.10 13 247 4.3E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS06205 58bce8f8e02bae09f86ba0caf7ad0f83 372 PANTHER PTHR30244 1 372 1.5E-130 T 22-04-2016 R615_RS04285 696fe878b0a7bcdd3d5a7d32831d86f6 612 Pfam PF02254 TrkA-N domain 414 525 8.1E-22 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 R615_RS04285 696fe878b0a7bcdd3d5a7d32831d86f6 612 PANTHER PTHR16254:SF6 1 567 1.8E-215 T 22-04-2016 R615_RS04285 696fe878b0a7bcdd3d5a7d32831d86f6 612 SUPERFAMILY SSF51735 412 540 1.48E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04285 696fe878b0a7bcdd3d5a7d32831d86f6 612 Gene3D G3DSA:3.40.50.720 406 542 3.3E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04285 696fe878b0a7bcdd3d5a7d32831d86f6 612 PANTHER PTHR16254 1 567 1.8E-215 T 22-04-2016 R615_RS04285 696fe878b0a7bcdd3d5a7d32831d86f6 612 Pfam PF00999 Sodium/hydrogen exchanger family 11 381 6.4E-63 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 R615_RS04285 696fe878b0a7bcdd3d5a7d32831d86f6 612 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 291 1.1E-77 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 R615_RS14060 d01215b7931871f5c9b99fff03796021 202 PANTHER PTHR11746:SF102 126 198 2.3E-26 T 22-04-2016 R615_RS14060 d01215b7931871f5c9b99fff03796021 202 PANTHER PTHR11746 126 198 2.3E-26 T 22-04-2016 R615_RS14060 d01215b7931871f5c9b99fff03796021 202 Gene3D G3DSA:3.90.950.10 6 194 5.5E-57 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like R615_RS14060 d01215b7931871f5c9b99fff03796021 202 Pfam PF02545 Maf-like protein 7 190 1.0E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 R615_RS14060 d01215b7931871f5c9b99fff03796021 202 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 187 4.8E-54 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 R615_RS14060 d01215b7931871f5c9b99fff03796021 202 Hamap MF_00528 Septum formation protein Maf [maf]. 7 195 28.771 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 R615_RS14060 d01215b7931871f5c9b99fff03796021 202 PIRSF PIRSF006305 1 197 2.2E-42 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 R615_RS14060 d01215b7931871f5c9b99fff03796021 202 SUPERFAMILY SSF52972 5 189 4.64E-57 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like R615_RS16630 d86ea261c93a39c1dd1819f85f2d1d02 256 Gene3D G3DSA:3.40.190.10 207 246 1.5E-4 T 22-04-2016 R615_RS16630 d86ea261c93a39c1dd1819f85f2d1d02 256 Gene3D G3DSA:3.40.190.10 24 99 1.5E-4 T 22-04-2016 R615_RS16630 d86ea261c93a39c1dd1819f85f2d1d02 256 SMART SM00062 24 250 0.0094 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF R615_RS16630 d86ea261c93a39c1dd1819f85f2d1d02 256 Gene3D G3DSA:3.40.190.10 100 187 3.2E-5 T 22-04-2016 R615_RS16630 d86ea261c93a39c1dd1819f85f2d1d02 256 SUPERFAMILY SSF53850 24 246 1.58E-24 T 22-04-2016 R615_RS16630 d86ea261c93a39c1dd1819f85f2d1d02 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 246 1.1E-13 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF R615_RS15065 4faa2dbe1b5776563093b134fa976fcf 144 Pfam PF02657 Fe-S metabolism associated domain 19 138 7.1E-47 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 R615_RS15065 4faa2dbe1b5776563093b134fa976fcf 144 Gene3D G3DSA:3.90.1010.10 4 141 1.1E-52 T 22-04-2016 R615_RS15065 4faa2dbe1b5776563093b134fa976fcf 144 SUPERFAMILY SSF82649 4 140 2.67E-45 T 22-04-2016 R615_RS15065 4faa2dbe1b5776563093b134fa976fcf 144 PANTHER PTHR12735:SF26 15 140 1.7E-43 T 22-04-2016 R615_RS15065 4faa2dbe1b5776563093b134fa976fcf 144 PANTHER PTHR12735 15 140 1.7E-43 T 22-04-2016 R615_RS07645 26163993176a36364a066c78d698d2c8 298 Gene3D G3DSA:3.30.70.270 137 291 9.8E-51 T 22-04-2016 R615_RS07645 26163993176a36364a066c78d698d2c8 298 PANTHER PTHR26402:SF495 6 136 9.0E-54 T 22-04-2016 R615_RS07645 26163993176a36364a066c78d698d2c8 298 PANTHER PTHR26402:SF495 234 255 9.0E-54 T 22-04-2016 R615_RS07645 26163993176a36364a066c78d698d2c8 298 SUPERFAMILY SSF52172 4 138 6.97E-40 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS07645 26163993176a36364a066c78d698d2c8 298 PANTHER PTHR26402 6 136 9.0E-54 T 22-04-2016 R615_RS07645 26163993176a36364a066c78d698d2c8 298 PANTHER PTHR26402 234 255 9.0E-54 T 22-04-2016 R615_RS07645 26163993176a36364a066c78d698d2c8 298 Gene3D G3DSA:3.40.50.2300 2 132 2.0E-43 T 22-04-2016 R615_RS07645 26163993176a36364a066c78d698d2c8 298 Pfam PF00990 Diguanylate cyclase, GGDEF domain 135 287 8.2E-43 T 22-04-2016 IPR000160 GGDEF domain R615_RS07645 26163993176a36364a066c78d698d2c8 298 Pfam PF00072 Response regulator receiver domain 8 117 6.4E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS07645 26163993176a36364a066c78d698d2c8 298 SMART SM00448 6 118 8.4E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS07645 26163993176a36364a066c78d698d2c8 298 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 132 291 2.8E-50 T 22-04-2016 IPR000160 GGDEF domain R615_RS07645 26163993176a36364a066c78d698d2c8 298 SMART SM00267 124 292 1.3E-53 T 22-04-2016 IPR000160 GGDEF domain R615_RS07645 26163993176a36364a066c78d698d2c8 298 SUPERFAMILY SSF55073 140 291 8.63E-46 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS07020 66b69cbc1a883847de5e1dd2e5515aac 86 Gene3D G3DSA:3.10.20.30 6 86 1.8E-10 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS07020 66b69cbc1a883847de5e1dd2e5515aac 86 SUPERFAMILY SSF54285 6 86 2.45E-10 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp R615_RS07020 66b69cbc1a883847de5e1dd2e5515aac 86 Pfam PF02597 ThiS family 9 86 8.0E-7 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 R615_RS08435 9e17278c92bfa0632ecadb43329ad78a 742 Gene3D G3DSA:3.40.718.10 341 364 4.5E-34 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 R615_RS08435 9e17278c92bfa0632ecadb43329ad78a 742 Gene3D G3DSA:3.40.718.10 163 289 4.5E-34 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 R615_RS08435 9e17278c92bfa0632ecadb43329ad78a 742 Gene3D G3DSA:3.40.718.10 540 645 4.5E-34 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 R615_RS08435 9e17278c92bfa0632ecadb43329ad78a 742 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 R615_RS08435 9e17278c92bfa0632ecadb43329ad78a 742 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 R615_RS08435 9e17278c92bfa0632ecadb43329ad78a 742 SUPERFAMILY SSF53659 6 741 0.0 T 22-04-2016 R615_RS08435 9e17278c92bfa0632ecadb43329ad78a 742 PANTHER PTHR36999 2 742 0.0 T 22-04-2016 R615_RS08435 9e17278c92bfa0632ecadb43329ad78a 742 PIRSF PIRSF009407 1 742 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 R615_RS17000 141689c5d685dc2be9c75f4d8b1404c0 264 PANTHER PTHR13696 3 261 7.4E-91 T 22-04-2016 R615_RS17000 141689c5d685dc2be9c75f4d8b1404c0 264 Pfam PF13614 AAA domain 3 178 4.2E-65 T 22-04-2016 IPR025669 AAA domain R615_RS17000 141689c5d685dc2be9c75f4d8b1404c0 264 SUPERFAMILY SSF52540 3 254 8.83E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17000 141689c5d685dc2be9c75f4d8b1404c0 264 Gene3D G3DSA:3.40.50.300 3 257 1.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17000 141689c5d685dc2be9c75f4d8b1404c0 264 PANTHER PTHR13696:SF52 3 261 7.4E-91 T 22-04-2016 R615_RS09560 fe4c94f3b35c78463d5c7626a9f2717f 172 PANTHER PTHR36930:SF1 1 161 3.0E-27 T 22-04-2016 R615_RS09560 fe4c94f3b35c78463d5c7626a9f2717f 172 SUPERFAMILY SSF50800 18 163 3.03E-32 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain R615_RS09560 fe4c94f3b35c78463d5c7626a9f2717f 172 Pfam PF03473 MOSC domain 59 160 7.4E-9 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 R615_RS09560 fe4c94f3b35c78463d5c7626a9f2717f 172 Gene3D G3DSA:2.40.33.20 17 165 3.9E-35 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like R615_RS09560 fe4c94f3b35c78463d5c7626a9f2717f 172 PANTHER PTHR36930 1 161 3.0E-27 T 22-04-2016 R615_RS14840 823c16a0ad88513d25a543b37d6ef68c 81 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 49 4.0E-10 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 R615_RS14840 823c16a0ad88513d25a543b37d6ef68c 81 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.4E-22 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 R615_RS14840 823c16a0ad88513d25a543b37d6ef68c 81 PANTHER PTHR34137 1 81 7.0E-23 T 22-04-2016 R615_RS14840 823c16a0ad88513d25a543b37d6ef68c 81 Pfam PF02609 Exonuclease VII small subunit 10 60 2.8E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 R615_RS14840 823c16a0ad88513d25a543b37d6ef68c 81 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 16.002 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 R615_RS14840 823c16a0ad88513d25a543b37d6ef68c 81 SUPERFAMILY SSF116842 5 73 1.83E-21 T 22-04-2016 R615_RS14840 823c16a0ad88513d25a543b37d6ef68c 81 Gene3D G3DSA:1.10.287.1040 5 74 8.0E-28 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 R615_RS04310 06e4c3efb4daa4d771d669a360af03fb 493 SUPERFAMILY SSF52540 1 187 3.46E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04310 06e4c3efb4daa4d771d669a360af03fb 493 SUPERFAMILY SSF52540 253 445 3.46E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04310 06e4c3efb4daa4d771d669a360af03fb 493 Pfam PF12476 Protein of unknown function (DUF3696) 444 486 6.8E-5 T 22-04-2016 IPR022532 Domain of unknown function DUF3696, C-terminal R615_RS04310 06e4c3efb4daa4d771d669a360af03fb 493 Pfam PF13175 AAA ATPase domain 1 431 1.2E-30 T 22-04-2016 R615_RS04310 06e4c3efb4daa4d771d669a360af03fb 493 PIRSF PIRSF034888 1 490 1.9E-41 T 22-04-2016 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 R615_RS04310 06e4c3efb4daa4d771d669a360af03fb 493 Gene3D G3DSA:3.40.50.300 2 181 5.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS04310 06e4c3efb4daa4d771d669a360af03fb 493 Gene3D G3DSA:3.40.50.300 309 452 5.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06430 aecf31f58d6dad714a8807ce528d7428 282 SUPERFAMILY SSF52540 243 281 3.64E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06430 aecf31f58d6dad714a8807ce528d7428 282 SUPERFAMILY SSF52540 8 216 3.64E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06430 aecf31f58d6dad714a8807ce528d7428 282 PANTHER PTHR10605 8 184 1.1E-27 T 22-04-2016 R615_RS06430 aecf31f58d6dad714a8807ce528d7428 282 Gene3D G3DSA:3.40.50.300 8 282 1.8E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06430 aecf31f58d6dad714a8807ce528d7428 282 Pfam PF13469 Sulfotransferase family 79 182 2.8E-10 T 22-04-2016 R615_RS06430 aecf31f58d6dad714a8807ce528d7428 282 PANTHER PTHR10605:SF40 8 184 1.1E-27 T 22-04-2016 R615_RS17270 b5220b75d213ef50d40a6eb29097a588 782 Pfam PF13719 zinc-ribbon domain 6 40 1.0E-10 T 22-04-2016 IPR011723 Zinc finger/thioredoxin putative R615_RS17270 b5220b75d213ef50d40a6eb29097a588 782 Pfam PF11906 Protein of unknown function (DUF3426) 634 777 7.7E-34 T 22-04-2016 IPR021834 Protein of unknown function DUF3426 R615_RS17270 b5220b75d213ef50d40a6eb29097a588 782 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 40 6.3E-15 T 22-04-2016 IPR011723 Zinc finger/thioredoxin putative R615_RS03445 232da2331dc3d49f41bc02211c73e374 385 PANTHER PTHR19353 22 322 3.5E-44 T 22-04-2016 R615_RS03445 232da2331dc3d49f41bc02211c73e374 385 PANTHER PTHR19353:SF27 22 322 3.5E-44 T 22-04-2016 R615_RS03445 232da2331dc3d49f41bc02211c73e374 385 Pfam PF00487 Fatty acid desaturase 58 333 9.1E-29 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 R615_RS12175 1b10c82659d23923dfb68a58d1e35685 263 SUPERFAMILY SSF51658 2 255 4.01E-67 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain R615_RS12175 1b10c82659d23923dfb68a58d1e35685 263 Pfam PF01261 Xylose isomerase-like TIM barrel 20 217 4.4E-28 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain R615_RS12175 1b10c82659d23923dfb68a58d1e35685 263 PANTHER PTHR12110 1 253 4.8E-64 T 22-04-2016 R615_RS12175 1b10c82659d23923dfb68a58d1e35685 263 PANTHER PTHR12110:SF22 1 253 4.8E-64 T 22-04-2016 R615_RS12175 1b10c82659d23923dfb68a58d1e35685 263 PIRSF PIRSF006241 1 260 2.7E-82 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 R615_RS12175 1b10c82659d23923dfb68a58d1e35685 263 Gene3D G3DSA:3.20.20.150 2 253 4.7E-71 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain R615_RS06200 acf316ac6b8949f15fe40e1788472b39 173 Pfam PF13302 Acetyltransferase (GNAT) domain 9 141 2.4E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS06200 acf316ac6b8949f15fe40e1788472b39 173 Gene3D G3DSA:3.40.630.30 2 145 3.1E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS06200 acf316ac6b8949f15fe40e1788472b39 173 SUPERFAMILY SSF55729 1 145 6.78E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS12470 4c4810596e0357073809e3727ccebce4 272 SUPERFAMILY SSF101386 5 105 3.27E-24 T 22-04-2016 R615_RS12470 4c4810596e0357073809e3727ccebce4 272 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 180 238 1.6E-4 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core R615_RS12470 4c4810596e0357073809e3727ccebce4 272 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 4.5E-26 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core R615_RS12470 4c4810596e0357073809e3727ccebce4 272 SUPERFAMILY SSF101386 149 247 1.96E-23 T 22-04-2016 R615_RS12470 4c4810596e0357073809e3727ccebce4 272 PANTHER PTHR30522:SF0 5 272 1.3E-109 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG R615_RS12470 4c4810596e0357073809e3727ccebce4 272 Gene3D G3DSA:1.10.287.1080 147 230 3.6E-12 T 22-04-2016 R615_RS12470 4c4810596e0357073809e3727ccebce4 272 Gene3D G3DSA:1.10.287.1080 22 72 1.7E-7 T 22-04-2016 R615_RS12470 4c4810596e0357073809e3727ccebce4 272 PANTHER PTHR30522 5 272 1.3E-109 T 22-04-2016 R615_RS12470 4c4810596e0357073809e3727ccebce4 272 TIGRFAM TIGR00444 mazG: MazG family protein 14 268 1.1E-92 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG R615_RS02685 e6662d08f7ffde6df6b35ed65eec4e20 137 PANTHER PTHR12231:SF138 15 137 2.4E-28 T 22-04-2016 R615_RS02685 e6662d08f7ffde6df6b35ed65eec4e20 137 SUPERFAMILY SSF52821 20 136 5.76E-31 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS02685 e6662d08f7ffde6df6b35ed65eec4e20 137 Pfam PF00581 Rhodanese-like domain 41 129 1.5E-14 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS02685 e6662d08f7ffde6df6b35ed65eec4e20 137 PANTHER PTHR12231 15 137 2.4E-28 T 22-04-2016 R615_RS02685 e6662d08f7ffde6df6b35ed65eec4e20 137 Gene3D G3DSA:3.40.250.10 36 136 9.5E-30 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS02685 e6662d08f7ffde6df6b35ed65eec4e20 137 SMART SM00450 37 133 4.4E-21 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS17125 ae479792fc8d0761bdbb60961d77ff50 572 SUPERFAMILY SSF52540 215 560 8.65E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17125 ae479792fc8d0761bdbb60961d77ff50 572 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 233 345 4.6E-5 T 22-04-2016 IPR018647 Domain of unknown function DUF2075 R615_RS17125 ae479792fc8d0761bdbb60961d77ff50 572 Gene3D G3DSA:3.40.50.300 402 566 1.8E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17125 ae479792fc8d0761bdbb60961d77ff50 572 Pfam PF13538 UvrD-like helicase C-terminal domain 511 554 1.1E-7 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain R615_RS17125 ae479792fc8d0761bdbb60961d77ff50 572 Pfam PF08378 Nuclease-related domain 16 122 8.4E-12 T 22-04-2016 IPR011528 Nuclease-related domain, NERD R615_RS17125 ae479792fc8d0761bdbb60961d77ff50 572 Gene3D G3DSA:3.40.50.300 208 346 9.1E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 SMART SM00382 93 246 3.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 Gene3D G3DSA:3.40.50.300 62 279 9.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 Pfam PF13481 AAA domain 86 224 2.9E-16 T 22-04-2016 R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 SUPERFAMILY SSF52540 70 292 7.41E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 PANTHER PTHR32472 1 456 1.3E-214 T 22-04-2016 R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 SUPERFAMILY SSF54211 305 455 4.17E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 SUPERFAMILY SSF54211 257 271 4.17E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 PRINTS PR01874 DNA repair protein radA signature 176 200 5.7E-93 T 22-04-2016 R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 PRINTS PR01874 DNA repair protein radA signature 126 143 5.7E-93 T 22-04-2016 R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 PRINTS PR01874 DNA repair protein radA signature 85 113 5.7E-93 T 22-04-2016 R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 PRINTS PR01874 DNA repair protein radA signature 215 243 5.7E-93 T 22-04-2016 R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 PRINTS PR01874 DNA repair protein radA signature 324 347 5.7E-93 T 22-04-2016 R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 PRINTS PR01874 DNA repair protein radA signature 250 276 5.7E-93 T 22-04-2016 R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 PRINTS PR01874 DNA repair protein radA signature 10 34 5.7E-93 T 22-04-2016 R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 Gene3D G3DSA:3.30.230.10 286 454 1.2E-39 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 432 6.9E-9 T 22-04-2016 R615_RS14870 149045c3e85cd3c74b310c9d49509c5b 456 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 5.6E-210 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 R615_RS12990 183ed3e7958123c5357f89a49ae8c54f 210 SUPERFAMILY SSF50715 5 204 3.49E-54 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 R615_RS12990 183ed3e7958123c5357f89a49ae8c54f 210 PANTHER PTHR33284 6 210 8.9E-65 T 22-04-2016 R615_RS12990 183ed3e7958123c5357f89a49ae8c54f 210 Gene3D G3DSA:2.170.120.20 106 204 9.9E-30 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain R615_RS12990 183ed3e7958123c5357f89a49ae8c54f 210 Pfam PF01386 Ribosomal L25p family 8 100 8.8E-29 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 R615_RS12990 183ed3e7958123c5357f89a49ae8c54f 210 Gene3D G3DSA:2.40.240.10 6 103 1.2E-32 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 R615_RS12990 183ed3e7958123c5357f89a49ae8c54f 210 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 180 3.4E-43 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 R615_RS12990 183ed3e7958123c5357f89a49ae8c54f 210 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 6 197 30.073 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 R615_RS12990 183ed3e7958123c5357f89a49ae8c54f 210 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 10 103 4.0E-24 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 R615_RS12990 183ed3e7958123c5357f89a49ae8c54f 210 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 6 103 23.064 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 R615_RS12990 183ed3e7958123c5357f89a49ae8c54f 210 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 108 199 1.3E-28 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain R615_RS13300 205e7a8518840f05f53847933b3d11ef 424 PANTHER PTHR23521 3 413 1.8E-110 T 22-04-2016 R615_RS13300 205e7a8518840f05f53847933b3d11ef 424 Gene3D G3DSA:1.20.1250.20 192 383 4.4E-15 T 22-04-2016 R615_RS13300 205e7a8518840f05f53847933b3d11ef 424 Gene3D G3DSA:1.20.1250.20 11 182 9.4E-12 T 22-04-2016 R615_RS13300 205e7a8518840f05f53847933b3d11ef 424 Pfam PF07690 Major Facilitator Superfamily 12 186 1.9E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 R615_RS13300 205e7a8518840f05f53847933b3d11ef 424 Pfam PF07690 Major Facilitator Superfamily 206 381 9.5E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 R615_RS13300 205e7a8518840f05f53847933b3d11ef 424 SUPERFAMILY SSF103473 10 377 1.19E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS13300 205e7a8518840f05f53847933b3d11ef 424 PANTHER PTHR23521:SF2 3 413 1.8E-110 T 22-04-2016 R615_RS13825 f839b1f8b5a014760f71f3f4b979530a 155 PANTHER PTHR24351:SF76 17 148 2.0E-29 T 22-04-2016 R615_RS13825 f839b1f8b5a014760f71f3f4b979530a 155 Pfam PF13426 PAS domain 26 131 3.4E-22 T 22-04-2016 IPR000014 PAS domain R615_RS13825 f839b1f8b5a014760f71f3f4b979530a 155 SUPERFAMILY SSF55785 22 132 2.79E-27 T 22-04-2016 IPR000014 PAS domain R615_RS13825 f839b1f8b5a014760f71f3f4b979530a 155 PANTHER PTHR24351 17 148 2.0E-29 T 22-04-2016 R615_RS13825 f839b1f8b5a014760f71f3f4b979530a 155 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 138 6.4E-20 T 22-04-2016 IPR000014 PAS domain R615_RS13825 f839b1f8b5a014760f71f3f4b979530a 155 Gene3D G3DSA:3.30.450.20 26 132 4.2E-31 T 22-04-2016 R615_RS13825 f839b1f8b5a014760f71f3f4b979530a 155 SMART SM00086 90 132 1.1E-12 T 22-04-2016 IPR001610 PAC motif R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 7 292 56.835 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 PRINTS PR00073 Coprogen oxidase signature 249 276 2.8E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 PRINTS PR00073 Coprogen oxidase signature 277 303 2.8E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 PRINTS PR00073 Coprogen oxidase signature 35 51 2.8E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 PRINTS PR00073 Coprogen oxidase signature 136 158 2.8E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 PRINTS PR00073 Coprogen oxidase signature 101 125 2.8E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 PRINTS PR00073 Coprogen oxidase signature 173 202 2.8E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 PANTHER PTHR10755 10 317 1.1E-179 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 SUPERFAMILY SSF102886 11 317 1.26E-133 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 Gene3D G3DSA:3.40.1500.10 10 317 3.2E-131 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 Pfam PF01218 Coproporphyrinogen III oxidase 13 317 3.8E-130 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 177 201 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS00575 3998d4890318ce85b06fba9fea7c3117 317 PIRSF PIRSF000166 2 317 4.0E-126 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 Gene3D G3DSA:3.30.830.10 34 263 6.7E-72 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 Pfam PF00675 Insulinase (Peptidase family M16) 55 192 1.3E-36 T 22-04-2016 IPR011765 Peptidase M16, N-terminal R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 Pfam PF16187 Middle or third domain of peptidase_M16 400 675 1.1E-67 T 22-04-2016 IPR032632 Peptidase M16, middle/third domain R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 PANTHER PTHR11851:SF155 411 908 1.0E-231 T 22-04-2016 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 PANTHER PTHR11851:SF155 25 394 1.0E-231 T 22-04-2016 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 Gene3D G3DSA:3.30.830.10 730 921 1.0E-35 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 SUPERFAMILY SSF63411 267 484 4.64E-54 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 SUPERFAMILY SSF63411 31 261 1.08E-58 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 Gene3D G3DSA:3.30.830.10 280 504 2.5E-53 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 SUPERFAMILY SSF63411 733 926 7.68E-39 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 SUPERFAMILY SSF63411 502 726 2.97E-50 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 PANTHER PTHR11851 411 908 1.0E-231 T 22-04-2016 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 PANTHER PTHR11851 25 394 1.0E-231 T 22-04-2016 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 Pfam PF05193 Peptidase M16 inactive domain 216 386 4.0E-24 T 22-04-2016 IPR007863 Peptidase M16, C-terminal R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 Pfam PF05193 Peptidase M16 inactive domain 679 815 2.0E-10 T 22-04-2016 IPR007863 Peptidase M16, C-terminal R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 Gene3D G3DSA:3.30.830.10 505 729 1.2E-56 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 R615_RS11990 35c1529eeb6eb21e879e614a7b8b259e 953 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 76 99 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 SUPERFAMILY SSF55874 345 502 3.14E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 PANTHER PTHR24423:SF483 244 503 2.5E-60 T 22-04-2016 R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 466 4.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 4.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 503 4.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 4.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 Gene3D G3DSA:3.30.450.20 182 229 9.4E-6 T 22-04-2016 R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 SMART SM00388 290 356 1.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 Gene3D G3DSA:3.30.565.10 361 502 3.0E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 Gene3D G3DSA:1.10.287.130 283 352 1.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 398 503 6.1E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 353 3.7E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 PANTHER PTHR24423 244 503 2.5E-60 T 22-04-2016 R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 SUPERFAMILY SSF55785 189 229 4.19E-5 T 22-04-2016 IPR000014 PAS domain R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 SUPERFAMILY SSF47384 281 352 1.08E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS03285 0c69afd3ede8e499d0c20596d9420e2b 505 SMART SM00387 397 505 1.1E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 SUPERFAMILY SSF47384 245 323 1.45E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 Pfam PF00072 Response regulator receiver domain 507 620 7.7E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 SMART SM00387 372 486 3.7E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 SUPERFAMILY SSF52172 506 626 3.27E-32 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 484 5.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 315 4.9E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 Gene3D G3DSA:3.40.50.2300 505 628 1.7E-37 T 22-04-2016 R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 Gene3D G3DSA:1.10.287.130 251 315 1.8E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 PANTHER PTHR24423 179 233 2.1E-107 T 22-04-2016 R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 PANTHER PTHR24423 255 631 2.1E-107 T 22-04-2016 R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 SMART SM00388 259 324 1.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 Gene3D G3DSA:3.30.565.10 333 491 9.7E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 1.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 SUPERFAMILY SSF55874 314 489 2.36E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS13795 90f23c18560a29e0bacc2d449f3452e0 631 SMART SM00448 505 620 1.5E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS14140 763a407ea3fc64dc85698f3cb2336f3d 106 PANTHER PTHR12231 20 98 7.9E-12 T 22-04-2016 R615_RS14140 763a407ea3fc64dc85698f3cb2336f3d 106 SMART SM00450 7 102 6.0E-17 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS14140 763a407ea3fc64dc85698f3cb2336f3d 106 PANTHER PTHR12231:SF138 20 98 7.9E-12 T 22-04-2016 R615_RS14140 763a407ea3fc64dc85698f3cb2336f3d 106 SUPERFAMILY SSF52821 2 105 1.44E-24 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS14140 763a407ea3fc64dc85698f3cb2336f3d 106 Gene3D G3DSA:3.40.250.10 3 98 5.6E-25 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS14140 763a407ea3fc64dc85698f3cb2336f3d 106 Pfam PF00581 Rhodanese-like domain 8 97 1.5E-13 T 22-04-2016 IPR001763 Rhodanese-like domain R615_RS12815 d365c0d8df3abe395301573563232d15 845 SMART SM00493 238 314 0.006 T 22-04-2016 IPR006171 Toprim domain R615_RS12815 d365c0d8df3abe395301573563232d15 845 Pfam PF13362 Toprim domain 240 336 5.4E-8 T 22-04-2016 IPR006171 Toprim domain R615_RS12815 d365c0d8df3abe395301573563232d15 845 Pfam PF06048 Domain of unknown function (DUF927) 359 630 6.1E-81 T 22-04-2016 IPR009270 Domain of unknown function DUF927 R615_RS09255 831a550068f604209f4a1848193b06aa 358 Gene3D G3DSA:3.20.20.70 10 351 1.5E-140 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS09255 831a550068f604209f4a1848193b06aa 358 PANTHER PTHR21225 1 350 1.8E-201 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 R615_RS09255 831a550068f604209f4a1848193b06aa 358 SUPERFAMILY SSF51569 8 348 1.78E-126 T 22-04-2016 R615_RS09255 831a550068f604209f4a1848193b06aa 358 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 349 8.9E-148 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 R615_RS09255 831a550068f604209f4a1848193b06aa 358 PIRSF PIRSF001361 1 355 8.4E-153 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 R615_RS09255 831a550068f604209f4a1848193b06aa 358 Pfam PF00793 DAHP synthetase I family 45 339 1.5E-88 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 R615_RS00310 0a1f505b7353516d228f9ad681612913 554 Pfam PF01564 Spermine/spermidine synthase 382 490 4.8E-11 T 22-04-2016 R615_RS00310 0a1f505b7353516d228f9ad681612913 554 Pfam PF01564 Spermine/spermidine synthase 236 353 1.7E-21 T 22-04-2016 R615_RS00310 0a1f505b7353516d228f9ad681612913 554 SUPERFAMILY SSF103473 6 216 1.1E-6 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS00310 0a1f505b7353516d228f9ad681612913 554 PANTHER PTHR11558:SF26 235 347 2.2E-66 T 22-04-2016 R615_RS00310 0a1f505b7353516d228f9ad681612913 554 PANTHER PTHR11558:SF26 377 524 2.2E-66 T 22-04-2016 R615_RS00310 0a1f505b7353516d228f9ad681612913 554 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 295 308 - T 22-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 R615_RS00310 0a1f505b7353516d228f9ad681612913 554 SUPERFAMILY SSF53335 382 524 3.8E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS00310 0a1f505b7353516d228f9ad681612913 554 SUPERFAMILY SSF53335 223 349 3.8E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS00310 0a1f505b7353516d228f9ad681612913 554 PANTHER PTHR11558 235 347 2.2E-66 T 22-04-2016 R615_RS00310 0a1f505b7353516d228f9ad681612913 554 PANTHER PTHR11558 377 524 2.2E-66 T 22-04-2016 R615_RS00310 0a1f505b7353516d228f9ad681612913 554 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 217 516 22.65 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 R615_RS00310 0a1f505b7353516d228f9ad681612913 554 Gene3D G3DSA:3.40.50.150 380 524 1.3E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS00310 0a1f505b7353516d228f9ad681612913 554 Gene3D G3DSA:3.40.50.150 270 347 1.3E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS17525 be8c40f128820b2a4ebbc896d1cb4e10 162 PANTHER PTHR30469:SF15 1 150 1.1E-18 T 22-04-2016 R615_RS17525 be8c40f128820b2a4ebbc896d1cb4e10 162 PANTHER PTHR30469 1 150 1.1E-18 T 22-04-2016 R615_RS09630 e58600bfb1f265d668201a2666bebe09 404 SUPERFAMILY SSF53686 12 397 9.43E-150 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme R615_RS09630 e58600bfb1f265d668201a2666bebe09 404 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 63 387 4.5E-48 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme R615_RS09630 e58600bfb1f265d668201a2666bebe09 404 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 16 398 2.9E-189 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 R615_RS09630 e58600bfb1f265d668201a2666bebe09 404 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 11 400 51.65 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 R615_RS09630 e58600bfb1f265d668201a2666bebe09 404 Gene3D G3DSA:3.40.50.1100 187 398 1.7E-95 T 22-04-2016 R615_RS09630 e58600bfb1f265d668201a2666bebe09 404 PANTHER PTHR10314:SF3 16 397 9.8E-237 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 R615_RS09630 e58600bfb1f265d668201a2666bebe09 404 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 90 104 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 R615_RS09630 e58600bfb1f265d668201a2666bebe09 404 PIRSF PIRSF001413 2 404 1.1E-164 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 R615_RS09630 e58600bfb1f265d668201a2666bebe09 404 Gene3D G3DSA:3.40.50.1100 109 186 1.2E-20 T 22-04-2016 R615_RS09630 e58600bfb1f265d668201a2666bebe09 404 PANTHER PTHR10314 16 397 9.8E-237 T 22-04-2016 R615_RS09605 23acc50c0bb63c19ff0f319ca5997d60 507 Pfam PF00156 Phosphoribosyl transferase domain 277 393 7.4E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 R615_RS09605 23acc50c0bb63c19ff0f319ca5997d60 507 Gene3D G3DSA:3.40.50.2020 271 443 1.9E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS09605 23acc50c0bb63c19ff0f319ca5997d60 507 Pfam PF13522 Glutamine amidotransferase domain 66 208 1.4E-14 T 22-04-2016 R615_RS09605 23acc50c0bb63c19ff0f319ca5997d60 507 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 467 44.195 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 R615_RS09605 23acc50c0bb63c19ff0f319ca5997d60 507 Gene3D G3DSA:3.60.20.10 2 258 6.3E-61 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal R615_RS09605 23acc50c0bb63c19ff0f319ca5997d60 507 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 465 5.2E-159 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 R615_RS09605 23acc50c0bb63c19ff0f319ca5997d60 507 SUPERFAMILY SSF56235 2 257 5.48E-69 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal R615_RS09605 23acc50c0bb63c19ff0f319ca5997d60 507 PANTHER PTHR11907:SF4 1 479 2.6E-263 T 22-04-2016 R615_RS09605 23acc50c0bb63c19ff0f319ca5997d60 507 PIRSF PIRSF000485 1 481 9.2E-162 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 R615_RS09605 23acc50c0bb63c19ff0f319ca5997d60 507 SUPERFAMILY SSF53271 250 484 1.97E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS09605 23acc50c0bb63c19ff0f319ca5997d60 507 PANTHER PTHR11907 1 479 2.6E-263 T 22-04-2016 R615_RS17210 1f89238c041e055e0d60625530e55e96 868 SUPERFAMILY SSF56436 701 865 4.47E-20 T 22-04-2016 IPR016187 C-type lectin fold R615_RS17210 1f89238c041e055e0d60625530e55e96 868 PANTHER PTHR24362:SF160 594 623 2.7E-53 T 22-04-2016 R615_RS17210 1f89238c041e055e0d60625530e55e96 868 PANTHER PTHR24362:SF160 103 334 2.7E-53 T 22-04-2016 R615_RS17210 1f89238c041e055e0d60625530e55e96 868 Gene3D G3DSA:1.10.510.10 186 376 7.9E-39 T 22-04-2016 R615_RS17210 1f89238c041e055e0d60625530e55e96 868 PANTHER PTHR24362 594 623 2.7E-53 T 22-04-2016 R615_RS17210 1f89238c041e055e0d60625530e55e96 868 PANTHER PTHR24362 103 334 2.7E-53 T 22-04-2016 R615_RS17210 1f89238c041e055e0d60625530e55e96 868 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 239 251 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 R615_RS17210 1f89238c041e055e0d60625530e55e96 868 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 119 148 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 R615_RS17210 1f89238c041e055e0d60625530e55e96 868 Gene3D G3DSA:3.30.200.20 106 185 1.4E-19 T 22-04-2016 R615_RS17210 1f89238c041e055e0d60625530e55e96 868 SUPERFAMILY SSF56112 110 383 5.53E-56 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS17210 1f89238c041e055e0d60625530e55e96 868 Pfam PF00069 Protein kinase domain 114 355 1.7E-42 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 R615_RS17210 1f89238c041e055e0d60625530e55e96 868 Gene3D G3DSA:3.90.1580.10 725 866 7.3E-18 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme R615_RS17210 1f89238c041e055e0d60625530e55e96 868 Pfam PF03781 Sulfatase-modifying factor enzyme 1 724 847 2.3E-13 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 8.5E-204 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 PANTHER PTHR20852:SF15 159 468 8.8E-261 T 22-04-2016 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 PANTHER PTHR20852:SF15 3 137 8.8E-261 T 22-04-2016 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 Gene3D G3DSA:3.30.590.10 105 456 1.0E-135 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 Pfam PF00120 Glutamine synthetase, catalytic domain 101 465 4.3E-135 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 13 94 3.1E-29 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 SUPERFAMILY SSF55931 101 467 1.96E-136 T 22-04-2016 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 258 273 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 PANTHER PTHR20852 159 468 8.8E-261 T 22-04-2016 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 PANTHER PTHR20852 3 137 8.8E-261 T 22-04-2016 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 Gene3D G3DSA:3.10.20.70 3 104 7.8E-38 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 385 397 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 SMART SM01230 101 378 4.5E-144 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS16620 bab6e3839b1192cd552bdf0f298c0f19 468 SUPERFAMILY SSF54368 2 99 1.96E-35 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 R615_RS11120 99cb948eb4b240327151494eb2d8c012 1084 Gene3D G3DSA:2.60.40.10 412 500 5.0E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold R615_RS11120 99cb948eb4b240327151494eb2d8c012 1084 Gene3D G3DSA:2.60.40.10 320 410 2.1E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold R615_RS11120 99cb948eb4b240327151494eb2d8c012 1084 SMART SM00736 412 501 0.017 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 R615_RS11120 99cb948eb4b240327151494eb2d8c012 1084 SMART SM00736 321 411 0.0045 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 R615_RS11120 99cb948eb4b240327151494eb2d8c012 1084 Gene3D G3DSA:2.60.40.1120 876 957 6.9E-4 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain R615_RS11120 99cb948eb4b240327151494eb2d8c012 1084 SUPERFAMILY SSF49313 320 409 1.02E-5 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 R615_RS03135 c33da99bbec2509a15f2d52bb091306f 90 PANTHER PTHR38036:SF1 1 90 2.2E-24 T 22-04-2016 R615_RS03135 c33da99bbec2509a15f2d52bb091306f 90 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 3 90 20.326 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 R615_RS03135 c33da99bbec2509a15f2d52bb091306f 90 SUPERFAMILY SSF117991 3 90 3.79E-22 T 22-04-2016 IPR027471 YbeD-like domain R615_RS03135 c33da99bbec2509a15f2d52bb091306f 90 Pfam PF04359 Protein of unknown function (DUF493) 7 90 5.9E-24 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 R615_RS03135 c33da99bbec2509a15f2d52bb091306f 90 Gene3D G3DSA:3.30.70.1460 4 90 9.9E-24 T 22-04-2016 IPR027471 YbeD-like domain R615_RS03135 c33da99bbec2509a15f2d52bb091306f 90 PANTHER PTHR38036 1 90 2.2E-24 T 22-04-2016 R615_RS02485 b0d67c9e8b0340266a8b2cc0d1aa73b8 507 SUPERFAMILY SSF56317 221 487 1.16E-58 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS02485 b0d67c9e8b0340266a8b2cc0d1aa73b8 507 PANTHER PTHR23088 207 507 1.2E-128 T 22-04-2016 R615_RS02485 b0d67c9e8b0340266a8b2cc0d1aa73b8 507 PANTHER PTHR23088:SF12 207 507 1.2E-128 T 22-04-2016 R615_RS02485 b0d67c9e8b0340266a8b2cc0d1aa73b8 507 Gene3D G3DSA:3.60.110.10 217 506 2.1E-61 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS02485 b0d67c9e8b0340266a8b2cc0d1aa73b8 507 Pfam PF00795 Carbon-nitrogen hydrolase 224 446 2.2E-31 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS02485 b0d67c9e8b0340266a8b2cc0d1aa73b8 507 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 369 389 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site R615_RS02485 b0d67c9e8b0340266a8b2cc0d1aa73b8 507 SUPERFAMILY SSF55729 7 149 4.4E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS02485 b0d67c9e8b0340266a8b2cc0d1aa73b8 507 Gene3D G3DSA:3.40.630.30 9 193 6.0E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 Gene3D G3DSA:3.40.1060.10 227 360 3.9E-34 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PANTHER PTHR11670:SF43 724 865 0.0 T 22-04-2016 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PANTHER PTHR11670:SF43 8 680 0.0 T 22-04-2016 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 Gene3D G3DSA:3.30.499.10 22 226 4.0E-59 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PRINTS PR00415 Aconitase family signature 191 204 5.1E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PRINTS PR00415 Aconitase family signature 138 151 5.1E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PRINTS PR00415 Aconitase family signature 205 220 5.1E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PRINTS PR00415 Aconitase family signature 281 294 5.1E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PRINTS PR00415 Aconitase family signature 162 170 5.1E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PRINTS PR00415 Aconitase family signature 407 418 5.1E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PRINTS PR00415 Aconitase family signature 360 374 5.1E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PRINTS PR00415 Aconitase family signature 469 482 5.1E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PRINTS PR00415 Aconitase family signature 267 280 5.1E-27 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 Pfam PF00330 Aconitase family (aconitate hydratase) 70 538 1.1E-145 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 Gene3D G3DSA:3.20.19.10 609 861 4.3E-62 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 Gene3D G3DSA:3.30.499.10 361 549 8.1E-53 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 862 0.0 T 22-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 SUPERFAMILY SSF53732 20 593 6.41E-181 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PANTHER PTHR11670 724 865 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 PANTHER PTHR11670 8 680 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 SUPERFAMILY SSF52016 602 861 8.44E-66 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel R615_RS09150 49ebe4776a98b76c2b5cb4acc0ca4e9b 865 Pfam PF00694 Aconitase C-terminal domain 660 791 4.1E-29 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08900 8c16973b9f47e04a07309a41489aa0ba 662 Pfam PF03239 Iron permease FTR1 family 352 507 1.3E-16 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 R615_RS08900 8c16973b9f47e04a07309a41489aa0ba 662 PANTHER PTHR31632:SF4 374 613 1.9E-50 T 22-04-2016 R615_RS08900 8c16973b9f47e04a07309a41489aa0ba 662 SUPERFAMILY SSF46626 148 228 4.95E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS08900 8c16973b9f47e04a07309a41489aa0ba 662 PANTHER PTHR31632 374 613 1.9E-50 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 R615_RS08900 8c16973b9f47e04a07309a41489aa0ba 662 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 147 224 6.4E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS08900 8c16973b9f47e04a07309a41489aa0ba 662 Gene3D G3DSA:1.10.760.10 148 233 1.1E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS07010 ac7f61c5df48ada4a97e9f0c9eb5f343 632 Pfam PF01964 Radical SAM ThiC family 146 594 2.8E-198 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 R615_RS07010 ac7f61c5df48ada4a97e9f0c9eb5f343 632 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 144 599 56.076 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 R615_RS07010 ac7f61c5df48ada4a97e9f0c9eb5f343 632 PANTHER PTHR30557 137 167 0.0 T 22-04-2016 R615_RS07010 ac7f61c5df48ada4a97e9f0c9eb5f343 632 PANTHER PTHR30557 196 621 0.0 T 22-04-2016 R615_RS07010 ac7f61c5df48ada4a97e9f0c9eb5f343 632 PANTHER PTHR30557 19 103 0.0 T 22-04-2016 R615_RS07010 ac7f61c5df48ada4a97e9f0c9eb5f343 632 Pfam PF13667 ThiC-associated domain 25 104 8.6E-28 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 R615_RS07010 ac7f61c5df48ada4a97e9f0c9eb5f343 632 PANTHER PTHR30557:SF1 137 167 0.0 T 22-04-2016 R615_RS07010 ac7f61c5df48ada4a97e9f0c9eb5f343 632 PANTHER PTHR30557:SF1 196 621 0.0 T 22-04-2016 R615_RS07010 ac7f61c5df48ada4a97e9f0c9eb5f343 632 PANTHER PTHR30557:SF1 19 103 0.0 T 22-04-2016 R615_RS07010 ac7f61c5df48ada4a97e9f0c9eb5f343 632 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 144 596 1.9E-214 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 328 8.0E-35 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 154 4.1E-22 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 SUPERFAMILY SSF55257 6 53 1.67E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 SUPERFAMILY SSF55257 178 232 1.67E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 7.1E-24 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 5.7E-108 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 Gene3D G3DSA:2.170.120.12 53 176 1.2E-38 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 Gene3D G3DSA:3.30.1360.10 9 51 6.0E-34 T 22-04-2016 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 Gene3D G3DSA:3.30.1360.10 177 230 6.0E-34 T 22-04-2016 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 SUPERFAMILY SSF56553 53 177 1.7E-39 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 Gene3D G3DSA:1.10.150.20 244 326 4.2E-37 T 22-04-2016 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 PANTHER PTHR32108:SF0 7 329 1.1E-143 T 22-04-2016 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 PANTHER PTHR32108 7 329 1.1E-143 T 22-04-2016 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 307 4.9E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 SUPERFAMILY SSF47789 250 324 5.1E-26 T 22-04-2016 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 SMART SM00662 23 233 4.5E-95 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 R615_RS15755 ed2bd289c8fd81297605667c85e92551 333 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 34.854 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 R615_RS13750 ed87bd7e8bcc9eb0fb083c5d6610ba0a 180 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 38 177 3.9E-48 T 22-04-2016 IPR005247 YbhB/YbcL R615_RS13750 ed87bd7e8bcc9eb0fb083c5d6610ba0a 180 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 177 4.8E-37 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein R615_RS13750 ed87bd7e8bcc9eb0fb083c5d6610ba0a 180 PANTHER PTHR30289:SF0 1 180 4.8E-83 T 22-04-2016 R615_RS13750 ed87bd7e8bcc9eb0fb083c5d6610ba0a 180 PANTHER PTHR30289 1 180 4.8E-83 T 22-04-2016 R615_RS13750 ed87bd7e8bcc9eb0fb083c5d6610ba0a 180 SUPERFAMILY SSF49777 19 179 1.7E-53 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein R615_RS13750 ed87bd7e8bcc9eb0fb083c5d6610ba0a 180 Gene3D G3DSA:3.90.280.10 18 179 2.5E-58 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein R615_RS02755 c318acf5976acaa4bedced537e2ac249 536 PANTHER PTHR30332 204 536 1.1E-71 T 22-04-2016 R615_RS02755 c318acf5976acaa4bedced537e2ac249 536 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 232 512 6.2E-82 T 22-04-2016 IPR013358 Pilus biogenesis, MshL R615_RS02755 c318acf5976acaa4bedced537e2ac249 536 PRINTS PR00811 Bacterial general secretion pathway protein D signature 267 277 6.5E-18 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS02755 c318acf5976acaa4bedced537e2ac249 536 PRINTS PR00811 Bacterial general secretion pathway protein D signature 500 514 6.5E-18 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS02755 c318acf5976acaa4bedced537e2ac249 536 PRINTS PR00811 Bacterial general secretion pathway protein D signature 331 355 6.5E-18 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS02755 c318acf5976acaa4bedced537e2ac249 536 PRINTS PR00811 Bacterial general secretion pathway protein D signature 477 495 6.5E-18 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS02755 c318acf5976acaa4bedced537e2ac249 536 SMART SM00965 98 146 4.6E-4 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 R615_RS02755 c318acf5976acaa4bedced537e2ac249 536 Pfam PF00263 Bacterial type II and III secretion system protein 335 513 2.5E-43 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 R615_RS02755 c318acf5976acaa4bedced537e2ac249 536 Pfam PF07655 Secretin N-terminal domain 150 236 1.1E-20 T 22-04-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 R615_RS14520 b6c77cc0e46564e645dc5e902dcae01e 86 Gene3D G3DSA:2.30.30.320 9 80 1.2E-28 T 22-04-2016 IPR023387 DUF1653-like domain R615_RS14520 b6c77cc0e46564e645dc5e902dcae01e 86 Pfam PF07866 Protein of unknown function (DUF1653) 15 74 6.9E-26 T 22-04-2016 IPR023387 DUF1653-like domain R615_RS03520 12036453f8418920625bd5bec29f3003 664 SUPERFAMILY SSF56935 21 646 1.21E-62 T 22-04-2016 R615_RS03520 12036453f8418920625bd5bec29f3003 664 Pfam PF07715 TonB-dependent Receptor Plug Domain 23 121 4.0E-7 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS03520 12036453f8418920625bd5bec29f3003 664 Gene3D G3DSA:2.40.170.20 122 639 2.2E-32 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS03520 12036453f8418920625bd5bec29f3003 664 Gene3D G3DSA:2.170.130.10 20 121 2.0E-6 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS07720 d1dd2b44c512d5bfd2af809893d8c870 293 Gene3D G3DSA:3.40.50.1820 56 278 8.7E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS07720 d1dd2b44c512d5bfd2af809893d8c870 293 SUPERFAMILY SSF53474 40 276 9.06E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS02555 0069557b8077e6c8b83a1fde4bfebb4c 164 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 133 6.6E-40 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS02555 0069557b8077e6c8b83a1fde4bfebb4c 164 Gene3D G3DSA:3.30.70.560 3 149 2.6E-51 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS02555 0069557b8077e6c8b83a1fde4bfebb4c 164 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 133 4.3E-34 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS02555 0069557b8077e6c8b83a1fde4bfebb4c 164 SUPERFAMILY SSF55083 1 148 1.44E-49 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS02555 0069557b8077e6c8b83a1fde4bfebb4c 164 PANTHER PTHR20941:SF10 1 150 1.5E-60 T 22-04-2016 R615_RS02555 0069557b8077e6c8b83a1fde4bfebb4c 164 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS02555 0069557b8077e6c8b83a1fde4bfebb4c 164 PANTHER PTHR20941 1 150 1.5E-60 T 22-04-2016 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 234 248 7.9E-39 T 22-04-2016 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 307 318 7.9E-39 T 22-04-2016 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 265 281 7.9E-39 T 22-04-2016 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 195 209 7.9E-39 T 22-04-2016 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 299 7.9E-39 T 22-04-2016 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 2.1E-146 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 379 48.071 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 265 276 8.8E-11 T 22-04-2016 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 350 363 8.8E-11 T 22-04-2016 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 237 246 8.8E-11 T 22-04-2016 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 SUPERFAMILY SSF52317 157 377 2.75E-63 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 7.9E-51 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 Gene3D G3DSA:3.50.30.20 4 141 6.8E-60 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 Gene3D G3DSA:3.40.50.880 158 378 4.7E-84 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 SMART SM01097 3 133 4.0E-88 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 PANTHER PTHR11405 3 380 1.5E-239 T 22-04-2016 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 Pfam PF00117 Glutamine amidotransferase class-I 198 373 1.6E-49 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 R615_RS03860 68cd7fb9633f4a4778a06201e46717e0 382 SUPERFAMILY SSF52021 4 141 7.98E-56 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 R615_RS08365 dfa18715dba550ac5a728fe15f77ee9a 307 Pfam PF13271 Domain of unknown function (DUF4062) 10 88 1.9E-8 T 22-04-2016 IPR025139 Domain of unknown function DUF4062 R615_RS02370 0043c7dac25a3d1c08edc073788968c4 304 Gene3D G3DSA:3.40.190.10 100 183 1.7E-22 T 22-04-2016 R615_RS02370 0043c7dac25a3d1c08edc073788968c4 304 SUPERFAMILY SSF53850 99 302 3.57E-29 T 22-04-2016 R615_RS02370 0043c7dac25a3d1c08edc073788968c4 304 PANTHER PTHR30537:SF26 7 303 1.0E-72 T 22-04-2016 R615_RS02370 0043c7dac25a3d1c08edc073788968c4 304 Pfam PF03466 LysR substrate binding domain 97 298 5.7E-25 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS02370 0043c7dac25a3d1c08edc073788968c4 304 Gene3D G3DSA:3.40.190.10 184 267 9.4E-9 T 22-04-2016 R615_RS02370 0043c7dac25a3d1c08edc073788968c4 304 PANTHER PTHR30537 7 303 1.0E-72 T 22-04-2016 R615_RS02370 0043c7dac25a3d1c08edc073788968c4 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 1.3E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS02370 0043c7dac25a3d1c08edc073788968c4 304 Gene3D G3DSA:1.10.10.10 9 92 2.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS02370 0043c7dac25a3d1c08edc073788968c4 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 4.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS02370 0043c7dac25a3d1c08edc073788968c4 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 4.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS02370 0043c7dac25a3d1c08edc073788968c4 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 4.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS02370 0043c7dac25a3d1c08edc073788968c4 304 SUPERFAMILY SSF46785 10 92 6.13E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05430 1866df315ed7f1224225a79753f3eddd 533 SUPERFAMILY SSF51621 429 514 1.44E-117 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS05430 1866df315ed7f1224225a79753f3eddd 533 SUPERFAMILY SSF51621 17 392 1.44E-117 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS05430 1866df315ed7f1224225a79753f3eddd 533 Gene3D G3DSA:3.20.20.60 4 270 5.1E-128 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS05430 1866df315ed7f1224225a79753f3eddd 533 Gene3D G3DSA:3.20.20.60 429 513 5.1E-128 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS05430 1866df315ed7f1224225a79753f3eddd 533 Gene3D G3DSA:3.20.20.60 303 392 5.1E-128 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS05430 1866df315ed7f1224225a79753f3eddd 533 PANTHER PTHR21631 446 533 3.1E-60 T 22-04-2016 R615_RS05430 1866df315ed7f1224225a79753f3eddd 533 PANTHER PTHR21631 96 144 3.1E-60 T 22-04-2016 R615_RS05430 1866df315ed7f1224225a79753f3eddd 533 PANTHER PTHR21631 166 266 3.1E-60 T 22-04-2016 R615_RS05430 1866df315ed7f1224225a79753f3eddd 533 PANTHER PTHR21631 317 409 3.1E-60 T 22-04-2016 R615_RS05430 1866df315ed7f1224225a79753f3eddd 533 Pfam PF00463 Isocitrate lyase family 448 530 4.0E-11 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 R615_RS05430 1866df315ed7f1224225a79753f3eddd 533 Pfam PF00463 Isocitrate lyase family 317 394 1.4E-10 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 R615_RS05430 1866df315ed7f1224225a79753f3eddd 533 Pfam PF00463 Isocitrate lyase family 98 269 1.7E-19 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 R615_RS14165 9c5db78107c680e40e5b37ffd3ea0329 396 Pfam PF16539 Flagellar assembly protein T, middle domain 114 275 3.1E-43 T 22-04-2016 IPR032386 Flagellar assembly protein T, middle domain R615_RS14165 9c5db78107c680e40e5b37ffd3ea0329 396 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 23 107 2.2E-19 T 22-04-2016 IPR032370 Flagellar assembly protein T, N-terminal R615_RS14165 9c5db78107c680e40e5b37ffd3ea0329 396 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 319 394 1.5E-21 T 22-04-2016 IPR032388 Flagellar assembly protein T, C-terminal R615_RS17520 e4a7c21f16e357f6deec265270ba3e4b 175 SUPERFAMILY SSF111369 44 142 2.35E-8 T 22-04-2016 R615_RS17520 e4a7c21f16e357f6deec265270ba3e4b 175 PANTHER PTHR30469 25 123 3.0E-13 T 22-04-2016 R615_RS17520 e4a7c21f16e357f6deec265270ba3e4b 175 Gene3D G3DSA:2.40.50.100 54 85 3.9E-6 T 22-04-2016 R615_RS17520 e4a7c21f16e357f6deec265270ba3e4b 175 Pfam PF13533 Biotin-lipoyl like 54 100 4.0E-6 T 22-04-2016 R615_RS17385 7d7bec84c61d2c48d7a3cd0435ad2ef3 191 Pfam PF07437 YfaZ precursor 16 191 4.1E-17 T 22-04-2016 IPR009998 YfaZ R615_RS07635 a6430461131968a983def46c3781719a 296 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 41 289 1.3E-51 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- R615_RS07635 a6430461131968a983def46c3781719a 296 PANTHER PTHR30521:SF0 49 293 5.2E-57 T 22-04-2016 R615_RS07635 a6430461131968a983def46c3781719a 296 PANTHER PTHR30521 49 293 5.2E-57 T 22-04-2016 R615_RS07635 a6430461131968a983def46c3781719a 296 SUPERFAMILY SSF54909 3 293 5.01E-72 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel R615_RS07635 a6430461131968a983def46c3781719a 296 Pfam PF04261 Dyp-type peroxidase family 38 288 3.5E-50 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- R615_RS16540 04b968900723fb0835261dddc89e23c2 760 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 676 688 5.9E-23 T 22-04-2016 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 640 655 5.9E-23 T 22-04-2016 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 623 638 5.9E-23 T 22-04-2016 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 470 489 5.9E-23 T 22-04-2016 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 Gene3D G3DSA:1.10.274.10 209 309 1.2E-31 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 SUPERFAMILY SSF51621 431 716 6.81E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 Pfam PF00391 PEP-utilising enzyme, mobile domain 330 402 9.5E-19 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 PANTHER PTHR22931:SF23 216 726 3.2E-253 T 22-04-2016 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 Pfam PF05524 PEP-utilising enzyme, N-terminal 181 302 2.4E-22 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 SUPERFAMILY SSF47831 207 319 1.83E-28 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 SUPERFAMILY SSF52009 301 423 8.11E-29 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 623 641 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 Gene3D G3DSA:3.30.450.40 1 159 1.5E-48 T 22-04-2016 IPR029016 GAF domain-like R615_RS16540 04b968900723fb0835261dddc89e23c2 760 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 432 716 2.8E-96 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 Gene3D G3DSA:3.50.30.10 310 433 4.3E-32 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 Pfam PF01590 GAF domain 17 152 5.0E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 PANTHER PTHR22931 216 726 3.2E-253 T 22-04-2016 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 SUPERFAMILY SSF55781 2 158 1.16E-32 T 22-04-2016 IPR029016 GAF domain-like R615_RS16540 04b968900723fb0835261dddc89e23c2 760 SMART SM00065 17 164 2.3E-27 T 22-04-2016 IPR003018 GAF domain GO:0005515 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 181 739 1.4E-133 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 R615_RS16540 04b968900723fb0835261dddc89e23c2 760 Gene3D G3DSA:3.20.20.60 434 743 7.9E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS10815 62a7421720c3ed74c386ad635b3a5a48 209 PANTHER PTHR12277 30 204 5.5E-31 T 22-04-2016 R615_RS10815 62a7421720c3ed74c386ad635b3a5a48 209 PANTHER PTHR12277:SF79 30 204 5.5E-31 T 22-04-2016 R615_RS10815 62a7421720c3ed74c386ad635b3a5a48 209 Gene3D G3DSA:3.40.50.1820 28 205 6.4E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS10815 62a7421720c3ed74c386ad635b3a5a48 209 Pfam PF00561 alpha/beta hydrolase fold 50 151 6.3E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS10815 62a7421720c3ed74c386ad635b3a5a48 209 SUPERFAMILY SSF53474 25 200 8.92E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS00110 cd4d493e61b38b8968b8eb42fffbd598 162 Gene3D G3DSA:3.10.490.10 5 151 8.9E-19 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like R615_RS00110 cd4d493e61b38b8968b8eb42fffbd598 162 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 6 150 2.2E-15 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like R615_RS00110 cd4d493e61b38b8968b8eb42fffbd598 162 SUPERFAMILY SSF110857 4 150 2.88E-17 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like R615_RS15120 ce2b076e5a05762991cc120476196893 506 PANTHER PTHR11699 1 506 0.0 T 22-04-2016 R615_RS15120 ce2b076e5a05762991cc120476196893 506 Gene3D G3DSA:3.40.309.10 270 469 2.5E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 R615_RS15120 ce2b076e5a05762991cc120476196893 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 2.5E-167 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 R615_RS15120 ce2b076e5a05762991cc120476196893 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 R615_RS15120 ce2b076e5a05762991cc120476196893 506 SUPERFAMILY SSF53720 12 498 3.01E-164 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 R615_RS15120 ce2b076e5a05762991cc120476196893 506 PANTHER PTHR11699:SF97 1 506 0.0 T 22-04-2016 R615_RS15120 ce2b076e5a05762991cc120476196893 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 R615_RS15120 ce2b076e5a05762991cc120476196893 506 Gene3D G3DSA:3.40.605.10 18 269 8.5E-93 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 R615_RS11130 9160eb64e6ed7ee44aceb42a2e28e926 79 Gene3D G3DSA:3.40.30.10 11 78 1.2E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11130 9160eb64e6ed7ee44aceb42a2e28e926 79 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 78 1.4E-10 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 R615_RS11130 9160eb64e6ed7ee44aceb42a2e28e926 79 SUPERFAMILY SSF52833 1 78 1.42E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11130 9160eb64e6ed7ee44aceb42a2e28e926 79 ProSitePatterns PS00195 Glutaredoxin active site. 5 21 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 R615_RS17135 dccfba627123b309243477d21d89af6a 638 Pfam PF09369 Domain of unknown function (DUF1998) 497 599 1.6E-7 T 22-04-2016 IPR018973 DEAD/DEAH-box helicase, putative R615_RS14000 b887b8dab2efcf634e446806b2886eed 268 Pfam PF01618 MotA/TolQ/ExbB proton channel family 113 223 3.3E-19 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 R615_RS14000 b887b8dab2efcf634e446806b2886eed 268 PANTHER PTHR30433:SF2 6 268 3.9E-56 T 22-04-2016 IPR022522 Flagellar motor stator, MotA R615_RS14000 b887b8dab2efcf634e446806b2886eed 268 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 194 211 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site R615_RS14000 b887b8dab2efcf634e446806b2886eed 268 PANTHER PTHR30433 6 268 3.9E-56 T 22-04-2016 R615_RS00890 a6c2f2e314288801938d39a5115f30e6 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 252 2.3E-54 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 R615_RS00890 a6c2f2e314288801938d39a5115f30e6 259 SUPERFAMILY SSF56219 1 253 1.44E-41 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase R615_RS00890 a6c2f2e314288801938d39a5115f30e6 259 PANTHER PTHR22748:SF6 1 253 5.2E-50 T 22-04-2016 R615_RS00890 a6c2f2e314288801938d39a5115f30e6 259 PANTHER PTHR22748 1 253 5.2E-50 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 R615_RS00890 a6c2f2e314288801938d39a5115f30e6 259 Gene3D G3DSA:3.60.10.10 1 253 1.0E-58 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase R615_RS10785 58fe57ab7b74356af88b24157c2e6989 69 Pfam PF14086 Domain of unknown function (DUF4266) 20 69 1.3E-21 T 22-04-2016 IPR025362 Domain of unknown function DUF4266 R615_RS05390 169895bf71241530a4dd6d0aa9670ab5 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 373 6.7E-123 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 R615_RS05390 169895bf71241530a4dd6d0aa9670ab5 379 PANTHER PTHR30372 1 379 6.7E-126 T 22-04-2016 R615_RS05390 169895bf71241530a4dd6d0aa9670ab5 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 1 376 40.071 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 R615_RS05390 169895bf71241530a4dd6d0aa9670ab5 379 Pfam PF02684 Lipid-A-disaccharide synthetase 3 368 1.1E-118 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 R615_RS05390 169895bf71241530a4dd6d0aa9670ab5 379 PANTHER PTHR30372:SF0 1 379 6.7E-126 T 22-04-2016 R615_RS05390 169895bf71241530a4dd6d0aa9670ab5 379 Gene3D G3DSA:3.40.50.2000 158 345 7.0E-7 T 22-04-2016 R615_RS05390 169895bf71241530a4dd6d0aa9670ab5 379 SUPERFAMILY SSF53756 1 351 1.01E-35 T 22-04-2016 R615_RS09195 afa3de616570f4e3309070e5eec38390 273 PANTHER PTHR31756:SF3 1 271 6.0E-101 T 22-04-2016 R615_RS09195 afa3de616570f4e3309070e5eec38390 273 PANTHER PTHR31756 1 271 6.0E-101 T 22-04-2016 R615_RS09195 afa3de616570f4e3309070e5eec38390 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 271 73.568 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein R615_RS09195 afa3de616570f4e3309070e5eec38390 273 Pfam PF03618 Kinase/pyrophosphorylase 6 262 3.1E-78 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 R615_RS05485 1a90b5689a703d1be1540dec3454651a 302 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS05485 1a90b5689a703d1be1540dec3454651a 302 SUPERFAMILY SSF52540 30 255 2.66E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05485 1a90b5689a703d1be1540dec3454651a 302 Gene3D G3DSA:3.40.50.300 29 242 3.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05485 1a90b5689a703d1be1540dec3454651a 302 SMART SM00382 58 238 3.2E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS05485 1a90b5689a703d1be1540dec3454651a 302 PANTHER PTHR24220 31 243 2.2E-96 T 22-04-2016 R615_RS05485 1a90b5689a703d1be1540dec3454651a 302 Pfam PF00005 ABC transporter 49 188 5.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS04805 ec1b5bfab2e17d0e31ac27271b5cb6d7 496 Gene3D G3DSA:2.60.120.10 383 494 2.7E-47 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS04805 ec1b5bfab2e17d0e31ac27271b5cb6d7 496 Pfam PF01050 Mannose-6-phosphate isomerase 340 490 5.0E-74 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 R615_RS04805 ec1b5bfab2e17d0e31ac27271b5cb6d7 496 PANTHER PTHR12526 157 308 4.8E-101 T 22-04-2016 R615_RS04805 ec1b5bfab2e17d0e31ac27271b5cb6d7 496 PANTHER PTHR12526 377 495 4.8E-101 T 22-04-2016 R615_RS04805 ec1b5bfab2e17d0e31ac27271b5cb6d7 496 SUPERFAMILY SSF53448 1 299 1.19E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS04805 ec1b5bfab2e17d0e31ac27271b5cb6d7 496 PANTHER PTHR12526:SF387 157 308 4.8E-101 T 22-04-2016 R615_RS04805 ec1b5bfab2e17d0e31ac27271b5cb6d7 496 PANTHER PTHR12526:SF387 377 495 4.8E-101 T 22-04-2016 R615_RS04805 ec1b5bfab2e17d0e31ac27271b5cb6d7 496 Gene3D G3DSA:3.90.550.10 1 290 3.3E-91 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS04805 ec1b5bfab2e17d0e31ac27271b5cb6d7 496 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 494 5.3E-205 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 R615_RS04805 ec1b5bfab2e17d0e31ac27271b5cb6d7 496 Pfam PF00483 Nucleotidyl transferase 3 305 2.2E-63 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 R615_RS04805 ec1b5bfab2e17d0e31ac27271b5cb6d7 496 SUPERFAMILY SSF51182 200 494 1.56E-80 T 22-04-2016 IPR011051 RmlC-like cupin domain R615_RS11135 9e0f39ba5969f621445f2a0be4319707 216 Gene3D G3DSA:2.40.30.20 7 108 2.3E-24 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS11135 9e0f39ba5969f621445f2a0be4319707 216 Gene3D G3DSA:2.40.30.20 109 201 5.1E-24 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 R615_RS11135 9e0f39ba5969f621445f2a0be4319707 216 Pfam PF00677 Lumazine binding domain 104 188 7.1E-17 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS11135 9e0f39ba5969f621445f2a0be4319707 216 Pfam PF00677 Lumazine binding domain 3 91 3.6E-16 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS11135 9e0f39ba5969f621445f2a0be4319707 216 SUPERFAMILY SSF63380 1 97 5.02E-20 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 R615_RS11135 9e0f39ba5969f621445f2a0be4319707 216 PANTHER PTHR21098:SF4 1 203 9.2E-87 T 22-04-2016 R615_RS11135 9e0f39ba5969f621445f2a0be4319707 216 SUPERFAMILY SSF63380 97 201 1.28E-26 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 R615_RS11135 9e0f39ba5969f621445f2a0be4319707 216 PIRSF PIRSF000498 1 210 2.2E-57 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS11135 9e0f39ba5969f621445f2a0be4319707 216 PANTHER PTHR21098 1 203 9.2E-87 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS11135 9e0f39ba5969f621445f2a0be4319707 216 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 8.7E-57 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 R615_RS15670 e1adfa19ea32adbb6a7315ce8a0fb0a1 183 PANTHER PTHR30173 1 182 3.6E-41 T 22-04-2016 R615_RS15670 e1adfa19ea32adbb6a7315ce8a0fb0a1 183 Pfam PF04545 Sigma-70, region 4 130 178 1.6E-11 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS15670 e1adfa19ea32adbb6a7315ce8a0fb0a1 183 Gene3D G3DSA:1.10.10.10 122 182 4.5E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS15670 e1adfa19ea32adbb6a7315ce8a0fb0a1 183 Pfam PF04542 Sigma-70 region 2 24 91 4.2E-14 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS15670 e1adfa19ea32adbb6a7315ce8a0fb0a1 183 SUPERFAMILY SSF88659 95 183 1.59E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS15670 e1adfa19ea32adbb6a7315ce8a0fb0a1 183 Gene3D G3DSA:1.10.1740.10 6 112 2.6E-22 T 22-04-2016 R615_RS15670 e1adfa19ea32adbb6a7315ce8a0fb0a1 183 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 181 5.2E-25 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS15670 e1adfa19ea32adbb6a7315ce8a0fb0a1 183 SUPERFAMILY SSF88946 7 103 2.28E-20 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS15670 e1adfa19ea32adbb6a7315ce8a0fb0a1 183 PANTHER PTHR30173:SF31 1 182 3.6E-41 T 22-04-2016 R615_RS06400 0f92341e817954ab272078b607100109 286 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 17 248 8.5E-51 T 22-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 R615_RS06400 0f92341e817954ab272078b607100109 286 Gene3D G3DSA:3.40.190.10 127 227 7.3E-4 T 22-04-2016 R615_RS06400 0f92341e817954ab272078b607100109 286 PANTHER PTHR35841 25 275 1.2E-14 T 22-04-2016 R615_RS06400 0f92341e817954ab272078b607100109 286 TIGRFAM TIGR04553 ABC_peri_selen: putative selenate ABC transporter periplasmic binding protein 22 283 4.2E-115 T 22-04-2016 IPR030836 Putative selenate ABC transporter periplasmic binding protein R615_RS06400 0f92341e817954ab272078b607100109 286 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 25 270 9.7E-58 T 22-04-2016 R615_RS06400 0f92341e817954ab272078b607100109 286 SUPERFAMILY SSF53850 43 233 8.7E-30 T 22-04-2016 R615_RS04645 e71370d6617b75c18c752444ce577415 225 PRINTS PR01008 Flagellar L-ring protein signature 164 180 3.1E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 R615_RS04645 e71370d6617b75c18c752444ce577415 225 PRINTS PR01008 Flagellar L-ring protein signature 138 153 3.1E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 R615_RS04645 e71370d6617b75c18c752444ce577415 225 PRINTS PR01008 Flagellar L-ring protein signature 201 215 3.1E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 R615_RS04645 e71370d6617b75c18c752444ce577415 225 PRINTS PR01008 Flagellar L-ring protein signature 185 199 3.1E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 R615_RS04645 e71370d6617b75c18c752444ce577415 225 PRINTS PR01008 Flagellar L-ring protein signature 66 78 3.1E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 R615_RS04645 e71370d6617b75c18c752444ce577415 225 PANTHER PTHR34933 1 225 6.7E-73 T 22-04-2016 R615_RS04645 e71370d6617b75c18c752444ce577415 225 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 222 26.237 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 R615_RS04645 e71370d6617b75c18c752444ce577415 225 PANTHER PTHR34933:SF2 1 225 6.7E-73 T 22-04-2016 R615_RS04645 e71370d6617b75c18c752444ce577415 225 Pfam PF02107 Flagellar L-ring protein 44 224 3.9E-58 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 R615_RS06955 bf2528c9e47abad60e3cc79e33961834 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 14 229 5.2E-20 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 R615_RS06955 bf2528c9e47abad60e3cc79e33961834 273 PANTHER PTHR10000 11 263 1.5E-14 T 22-04-2016 R615_RS06955 bf2528c9e47abad60e3cc79e33961834 273 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 13 259 7.7E-63 T 22-04-2016 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 R615_RS06955 bf2528c9e47abad60e3cc79e33961834 273 SUPERFAMILY SSF56784 13 231 2.59E-39 T 22-04-2016 IPR023214 HAD-like domain R615_RS06955 bf2528c9e47abad60e3cc79e33961834 273 Gene3D G3DSA:3.30.980.20 95 179 1.8E-29 T 22-04-2016 R615_RS06955 bf2528c9e47abad60e3cc79e33961834 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 183 239 8.2E-5 T 22-04-2016 IPR023214 HAD-like domain R615_RS06955 bf2528c9e47abad60e3cc79e33961834 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 115 9.9E-10 T 22-04-2016 IPR023214 HAD-like domain R615_RS06955 bf2528c9e47abad60e3cc79e33961834 273 PANTHER PTHR10000:SF19 11 263 1.5E-14 T 22-04-2016 R615_RS06955 bf2528c9e47abad60e3cc79e33961834 273 Gene3D G3DSA:3.40.50.1000 13 92 7.1E-37 T 22-04-2016 IPR023214 HAD-like domain R615_RS06955 bf2528c9e47abad60e3cc79e33961834 273 Gene3D G3DSA:3.40.50.1000 180 259 7.1E-37 T 22-04-2016 IPR023214 HAD-like domain R615_RS02205 ba2d93ed98529539e2204e7dd16fbdc3 158 SUPERFAMILY SSF52540 3 116 3.22E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02205 ba2d93ed98529539e2204e7dd16fbdc3 158 PANTHER PTHR37816 2 131 3.0E-15 T 22-04-2016 R615_RS02205 ba2d93ed98529539e2204e7dd16fbdc3 158 Gene3D G3DSA:3.40.50.300 3 116 3.2E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02205 ba2d93ed98529539e2204e7dd16fbdc3 158 PANTHER PTHR37816:SF1 2 131 3.0E-15 T 22-04-2016 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 336 1.2E-155 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 Gene3D G3DSA:3.90.640.10 189 260 1.6E-28 T 22-04-2016 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 Gene3D G3DSA:3.30.420.40 10 161 2.6E-44 T 22-04-2016 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 Pfam PF06723 MreB/Mbl protein 11 336 4.4E-146 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 Gene3D G3DSA:3.30.420.40 265 319 1.6E-33 T 22-04-2016 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 Gene3D G3DSA:3.30.420.40 162 188 1.6E-33 T 22-04-2016 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 SUPERFAMILY SSF53067 10 150 1.94E-37 T 22-04-2016 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 PANTHER PTHR19375:SF117 9 328 4.4E-174 T 22-04-2016 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 SUPERFAMILY SSF53067 151 333 2.25E-47 T 22-04-2016 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 PANTHER PTHR19375 9 328 4.4E-174 T 22-04-2016 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 134 153 1.7E-61 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 189 209 1.7E-61 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 1.7E-61 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 302 328 1.7E-61 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 R615_RS02015 5d1c31505919a8e10ba47da1c55b24f0 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 1.7E-61 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 R615_RS07395 921f7347eeac499d9d37f8cc84d287a1 191 PANTHER PTHR36920 1 191 8.9E-43 T 22-04-2016 R615_RS07395 921f7347eeac499d9d37f8cc84d287a1 191 Gene3D G3DSA:2.40.160.20 23 191 1.1E-42 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS07395 921f7347eeac499d9d37f8cc84d287a1 191 PANTHER PTHR36920:SF1 1 191 8.9E-43 T 22-04-2016 R615_RS07395 921f7347eeac499d9d37f8cc84d287a1 191 Pfam PF03922 OmpW family 24 191 1.5E-36 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 R615_RS07395 921f7347eeac499d9d37f8cc84d287a1 191 SUPERFAMILY SSF56925 23 191 7.32E-20 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS11345 247315b9689e8a05328b5b217364d4e4 94 Pfam PF13670 Peptidase propeptide and YPEB domain 5 92 8.8E-15 T 22-04-2016 IPR025711 PepSY domain R615_RS05680 99707fad463aea56ddb612354f43829b 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 76 2.3E-35 T 22-04-2016 IPR013468 Conserved hypothetical protein CHP02647 R615_RS05680 99707fad463aea56ddb612354f43829b 77 Pfam PF06146 Phosphate-starvation-inducible E 8 69 6.9E-13 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like R615_RS02130 8361623e3d2c56e1cbca3d6b926a1718 77 Gene3D G3DSA:3.30.300.90 3 75 6.4E-14 T 22-04-2016 IPR002634 BolA protein R615_RS02130 8361623e3d2c56e1cbca3d6b926a1718 77 Pfam PF01722 BolA-like protein 32 73 2.6E-9 T 22-04-2016 IPR002634 BolA protein R615_RS02130 8361623e3d2c56e1cbca3d6b926a1718 77 SUPERFAMILY SSF82657 3 75 3.4E-15 T 22-04-2016 IPR002634 BolA protein R615_RS01335 34ece832f524c81badc2539c4c2af048 258 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 82 6.4E-11 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 R615_RS01335 34ece832f524c81badc2539c4c2af048 258 Gene3D G3DSA:3.40.30.10 7 88 9.6E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS01335 34ece832f524c81badc2539c4c2af048 258 Pfam PF13410 Glutathione S-transferase, C-terminal domain 162 205 1.3E-7 T 22-04-2016 R615_RS01335 34ece832f524c81badc2539c4c2af048 258 Gene3D G3DSA:1.20.1050.10 127 224 2.6E-11 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS01335 34ece832f524c81badc2539c4c2af048 258 SUPERFAMILY SSF47616 138 206 2.51E-10 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like R615_RS01335 34ece832f524c81badc2539c4c2af048 258 SUPERFAMILY SSF52833 7 93 1.32E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS06050 91999cee2a1918ecddc45f19ef8ccb44 325 SMART SM00267 134 304 1.4E-58 T 22-04-2016 IPR000160 GGDEF domain R615_RS06050 91999cee2a1918ecddc45f19ef8ccb44 325 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 143 301 1.5E-50 T 22-04-2016 IPR000160 GGDEF domain R615_RS06050 91999cee2a1918ecddc45f19ef8ccb44 325 PANTHER PTHR10799 48 299 1.8E-24 T 22-04-2016 R615_RS06050 91999cee2a1918ecddc45f19ef8ccb44 325 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 299 9.6E-46 T 22-04-2016 IPR000160 GGDEF domain R615_RS06050 91999cee2a1918ecddc45f19ef8ccb44 325 PANTHER PTHR10799:SF710 48 299 1.8E-24 T 22-04-2016 R615_RS06050 91999cee2a1918ecddc45f19ef8ccb44 325 Gene3D G3DSA:3.30.70.270 146 302 2.5E-53 T 22-04-2016 R615_RS06050 91999cee2a1918ecddc45f19ef8ccb44 325 SUPERFAMILY SSF55073 149 302 2.82E-46 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS09985 6d37d8de99464d408d7b90c5caa2ddbc 397 SUPERFAMILY SSF53850 19 275 4.16E-26 T 22-04-2016 R615_RS09985 6d37d8de99464d408d7b90c5caa2ddbc 397 Gene3D G3DSA:3.40.190.10 159 258 5.9E-9 T 22-04-2016 R615_RS09985 6d37d8de99464d408d7b90c5caa2ddbc 397 PANTHER PTHR30024 13 124 1.7E-104 T 22-04-2016 R615_RS09985 6d37d8de99464d408d7b90c5caa2ddbc 397 PANTHER PTHR30024 151 397 1.7E-104 T 22-04-2016 R615_RS09985 6d37d8de99464d408d7b90c5caa2ddbc 397 Pfam PF13379 NMT1-like family 18 277 7.0E-77 T 22-04-2016 R615_RS09985 6d37d8de99464d408d7b90c5caa2ddbc 397 PANTHER PTHR30024:SF7 13 124 1.7E-104 T 22-04-2016 R615_RS09985 6d37d8de99464d408d7b90c5caa2ddbc 397 PANTHER PTHR30024:SF7 151 397 1.7E-104 T 22-04-2016 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 Pfam PF14698 Argininosuccinate lyase C-terminal 369 437 1.3E-25 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 SUPERFAMILY SSF48557 10 460 2.36E-155 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 Gene3D G3DSA:1.20.200.10 113 380 1.4E-109 T 22-04-2016 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 Gene3D G3DSA:1.10.275.10 9 112 7.3E-41 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 Gene3D G3DSA:1.10.40.30 381 437 5.0E-31 T 22-04-2016 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 TIGRFAM TIGR00838 argH: argininosuccinate lyase 10 458 4.6E-196 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 6.5E-31 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 6.5E-31 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 6.5E-31 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 6.5E-31 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 Hamap MF_00006 Argininosuccinate lyase [argH]. 8 459 44.314 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 PRINTS PR00145 Argininosuccinate lyase family signature 199 215 3.7E-69 T 22-04-2016 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 3.7E-69 T 22-04-2016 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 3.7E-69 T 22-04-2016 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 PRINTS PR00145 Argininosuccinate lyase family signature 237 261 3.7E-69 T 22-04-2016 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 PRINTS PR00145 Argininosuccinate lyase family signature 107 129 3.7E-69 T 22-04-2016 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 PRINTS PR00145 Argininosuccinate lyase family signature 316 335 3.7E-69 T 22-04-2016 R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 Pfam PF00206 Lyase 12 306 5.6E-80 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 PANTHER PTHR11444 10 461 8.8E-237 T 22-04-2016 IPR000362 Fumarate lyase family R615_RS16870 bc74dc34b86fe77e95901a719c55b52c 465 PANTHER PTHR11444:SF3 10 461 8.8E-237 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS09640 fccc76e72959418970ce4a3a33d85dee 349 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 287 329 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 R615_RS09640 fccc76e72959418970ce4a3a33d85dee 349 SUPERFAMILY SSF46689 287 334 2.26E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS09640 fccc76e72959418970ce4a3a33d85dee 349 SMART SM00342 251 333 5.8E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS09640 fccc76e72959418970ce4a3a33d85dee 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 317 333 5.9E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS09640 fccc76e72959418970ce4a3a33d85dee 349 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 302 317 5.9E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS09640 fccc76e72959418970ce4a3a33d85dee 349 PANTHER PTHR11019 232 341 2.6E-26 T 22-04-2016 R615_RS09640 fccc76e72959418970ce4a3a33d85dee 349 PANTHER PTHR11019:SF52 232 341 2.6E-26 T 22-04-2016 R615_RS09640 fccc76e72959418970ce4a3a33d85dee 349 Gene3D G3DSA:1.10.10.60 286 334 1.1E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS09640 fccc76e72959418970ce4a3a33d85dee 349 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 64 206 1.6E-14 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS09640 fccc76e72959418970ce4a3a33d85dee 349 Pfam PF12833 Helix-turn-helix domain 257 334 1.5E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 Pfam PF04073 Aminoacyl-tRNA editing domain 257 382 1.1E-22 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 PANTHER PTHR11451 403 578 5.1E-154 T 22-04-2016 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 PANTHER PTHR11451 4 244 5.1E-154 T 22-04-2016 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 465 7.5E-50 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 573 7.4E-231 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 Gene3D G3DSA:3.30.930.10 12 234 1.8E-103 T 22-04-2016 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 Gene3D G3DSA:3.30.930.10 395 478 1.8E-103 T 22-04-2016 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 SUPERFAMILY SSF55681 413 484 5.33E-106 T 22-04-2016 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 SUPERFAMILY SSF55681 10 237 5.33E-106 T 22-04-2016 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 PIRSF PIRSF001535 1 579 2.9E-258 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 SUPERFAMILY SSF55826 218 396 1.7E-25 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.5E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.5E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.5E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.5E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 PANTHER PTHR11451:SF3 403 578 5.1E-154 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 PANTHER PTHR11451:SF3 4 244 5.1E-154 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 578 41.359 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 Pfam PF03129 Anticodon binding domain 481 575 6.5E-13 T 22-04-2016 IPR004154 Anticodon-binding R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 SUPERFAMILY SSF52954 469 577 3.78E-28 T 22-04-2016 IPR004154 Anticodon-binding R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 Gene3D G3DSA:3.40.50.800 479 577 3.4E-28 T 22-04-2016 IPR004154 Anticodon-binding R615_RS10115 d6e5f333089baa87b14d9c5df5fc49a0 579 Gene3D G3DSA:3.90.960.10 253 394 1.7E-25 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 R615_RS14745 ce90c127518168e9fd32734e2bb89d3f 249 SMART SM00967 5 80 3.4E-11 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 R615_RS14745 ce90c127518168e9fd32734e2bb89d3f 249 SUPERFAMILY SSF75217 93 244 4.91E-48 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases R615_RS14745 ce90c127518168e9fd32734e2bb89d3f 249 Gene3D G3DSA:3.30.1330.30 2 73 4.7E-19 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like R615_RS14745 ce90c127518168e9fd32734e2bb89d3f 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 42.767 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB R615_RS14745 ce90c127518168e9fd32734e2bb89d3f 249 PANTHER PTHR12029 3 244 1.5E-76 T 22-04-2016 R615_RS14745 ce90c127518168e9fd32734e2bb89d3f 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 3.3E-82 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 R615_RS14745 ce90c127518168e9fd32734e2bb89d3f 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 3.0E-14 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 R615_RS14745 ce90c127518168e9fd32734e2bb89d3f 249 SUPERFAMILY SSF55315 3 74 7.42E-15 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like R615_RS14745 ce90c127518168e9fd32734e2bb89d3f 249 Gene3D G3DSA:3.40.1280.10 94 244 8.6E-55 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal R615_RS14745 ce90c127518168e9fd32734e2bb89d3f 249 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.3E-39 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 R615_RS13630 a7a4fbf34c12fb920116761af3ca7b1a 300 SUPERFAMILY SSF53067 1 298 5.27E-61 T 22-04-2016 R615_RS13630 a7a4fbf34c12fb920116761af3ca7b1a 300 Gene3D G3DSA:3.30.420.40 132 274 1.2E-44 T 22-04-2016 R615_RS13630 a7a4fbf34c12fb920116761af3ca7b1a 300 Pfam PF00480 ROK family 4 295 1.8E-72 T 22-04-2016 IPR000600 ROK family R615_RS13630 a7a4fbf34c12fb920116761af3ca7b1a 300 PANTHER PTHR18964 4 295 1.0E-85 T 22-04-2016 R615_RS13630 a7a4fbf34c12fb920116761af3ca7b1a 300 PANTHER PTHR18964:SF134 4 295 1.0E-85 T 22-04-2016 R615_RS13630 a7a4fbf34c12fb920116761af3ca7b1a 300 Gene3D G3DSA:3.30.420.40 4 131 1.0E-35 T 22-04-2016 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 Pfam PF00512 His Kinase A (phospho-acceptor) domain 515 579 1.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 681 7.7E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 PRINTS PR00344 Bacterial sensor protein C-terminal signature 726 739 7.7E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 695 7.7E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 PRINTS PR00344 Bacterial sensor protein C-terminal signature 702 720 7.7E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 SUPERFAMILY SSF47384 500 580 1.43E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 SUPERFAMILY SSF47226 907 998 2.62E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 SUPERFAMILY SSF47226 867 880 2.62E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 SMART SM00388 514 579 2.2E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 Pfam PF00072 Response regulator receiver domain 767 884 3.8E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 SMART SM00448 765 884 2.4E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 Gene3D G3DSA:3.30.450.20 97 221 1.3E-34 T 22-04-2016 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 Gene3D G3DSA:1.10.287.130 509 575 2.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 SUPERFAMILY SSF55785 362 458 1.81E-7 T 22-04-2016 IPR000014 PAS domain R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 SMART SM00387 626 742 1.0E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 Gene3D G3DSA:3.40.50.2300 764 889 1.8E-36 T 22-04-2016 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 Gene3D G3DSA:3.30.565.10 580 745 9.9E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 PANTHER PTHR24423 14 22 1.7E-149 T 22-04-2016 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 PANTHER PTHR24423 493 932 1.7E-149 T 22-04-2016 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 PANTHER PTHR24423 349 474 1.7E-149 T 22-04-2016 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 SUPERFAMILY SSF55874 568 742 2.23E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 SUPERFAMILY SSF103190 47 221 3.84E-36 T 22-04-2016 IPR029151 Periplasmic sensor domain-like R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 Pfam PF01627 Hpt domain 928 987 2.0E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 Gene3D G3DSA:1.20.120.160 919 1014 2.3E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 SUPERFAMILY SSF52172 764 888 4.27E-36 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 627 741 7.3E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 Pfam PF08448 PAS fold 368 474 5.4E-6 T 22-04-2016 IPR013656 PAS fold-4 R615_RS17345 afbcc6afa162c50ebc20ebfca1f362da 1018 Gene3D G3DSA:3.30.450.20 358 472 1.2E-8 T 22-04-2016 R615_RS00625 0b15c0eb166047051e516a78e5d4ac89 283 Gene3D G3DSA:3.40.50.620 151 283 2.5E-19 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS00625 0b15c0eb166047051e516a78e5d4ac89 283 SUPERFAMILY SSF52402 2 155 7.2E-15 T 22-04-2016 R615_RS00625 0b15c0eb166047051e516a78e5d4ac89 283 SUPERFAMILY SSF52402 164 283 2.76E-22 T 22-04-2016 R615_RS00625 0b15c0eb166047051e516a78e5d4ac89 283 Pfam PF00582 Universal stress protein family 205 283 1.6E-9 T 22-04-2016 IPR006016 UspA GO:0006950 R615_RS00625 0b15c0eb166047051e516a78e5d4ac89 283 Pfam PF00582 Universal stress protein family 2 155 5.8E-11 T 22-04-2016 IPR006016 UspA GO:0006950 R615_RS00625 0b15c0eb166047051e516a78e5d4ac89 283 PRINTS PR01438 Universal stress protein signature 261 283 2.9E-9 T 22-04-2016 IPR006015 Universal stress protein A R615_RS00625 0b15c0eb166047051e516a78e5d4ac89 283 PRINTS PR01438 Universal stress protein signature 243 255 2.9E-9 T 22-04-2016 IPR006015 Universal stress protein A R615_RS00625 0b15c0eb166047051e516a78e5d4ac89 283 PRINTS PR01438 Universal stress protein signature 163 181 2.9E-9 T 22-04-2016 IPR006015 Universal stress protein A R615_RS00625 0b15c0eb166047051e516a78e5d4ac89 283 Gene3D G3DSA:3.40.50.620 2 150 3.8E-15 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS04665 6edc1a70c319cf35acccb05195d83979 353 PANTHER PTHR33308:SF3 182 322 1.7E-19 T 22-04-2016 R615_RS04665 6edc1a70c319cf35acccb05195d83979 353 PANTHER PTHR33308:SF3 25 163 1.7E-19 T 22-04-2016 R615_RS04665 6edc1a70c319cf35acccb05195d83979 353 Pfam PF10135 Rod binding protein 51 100 2.1E-13 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal R615_RS04665 6edc1a70c319cf35acccb05195d83979 353 PANTHER PTHR33308 182 322 1.7E-19 T 22-04-2016 R615_RS04665 6edc1a70c319cf35acccb05195d83979 353 PANTHER PTHR33308 25 163 1.7E-19 T 22-04-2016 R615_RS04665 6edc1a70c319cf35acccb05195d83979 353 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 189 324 2.6E-20 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 R615_RS04665 6edc1a70c319cf35acccb05195d83979 353 SMART SM00047 172 336 8.3E-26 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 R615_RS04665 6edc1a70c319cf35acccb05195d83979 353 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 13 323 3.2E-78 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- R615_RS17595 b35b758f6154af3fe69f6bebf3e3fca5 220 SUPERFAMILY SSF46689 12 79 4.99E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS17595 b35b758f6154af3fe69f6bebf3e3fca5 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.5E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS17595 b35b758f6154af3fe69f6bebf3e3fca5 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.5E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS17595 b35b758f6154af3fe69f6bebf3e3fca5 220 SUPERFAMILY SSF48498 89 202 1.78E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal R615_RS17595 b35b758f6154af3fe69f6bebf3e3fca5 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 2.5E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS17595 b35b758f6154af3fe69f6bebf3e3fca5 220 Pfam PF13305 WHG domain 97 178 4.5E-6 T 22-04-2016 IPR025996 WHG domain R615_RS17595 b35b758f6154af3fe69f6bebf3e3fca5 220 PANTHER PTHR30055 1 182 1.4E-23 T 22-04-2016 R615_RS17595 b35b758f6154af3fe69f6bebf3e3fca5 220 Gene3D G3DSA:1.10.357.10 9 185 3.1E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS03500 2fb0444a0b2d57c281fab0f26643df98 491 Pfam PF00817 impB/mucB/samB family 28 163 2.2E-7 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS03500 2fb0444a0b2d57c281fab0f26643df98 491 SUPERFAMILY SSF56672 16 235 4.0E-26 T 22-04-2016 R615_RS03500 2fb0444a0b2d57c281fab0f26643df98 491 PANTHER PTHR35369:SF2 14 491 2.5E-62 T 22-04-2016 R615_RS03500 2fb0444a0b2d57c281fab0f26643df98 491 PANTHER PTHR35369 14 491 2.5E-62 T 22-04-2016 R615_RS04545 215624d232efb77bf309b00b55989f8b 499 Gene3D G3DSA:3.40.50.150 163 396 7.5E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS04545 215624d232efb77bf309b00b55989f8b 499 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 271 277 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 R615_RS04545 215624d232efb77bf309b00b55989f8b 499 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 185 199 2.6E-21 T 22-04-2016 R615_RS04545 215624d232efb77bf309b00b55989f8b 499 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 161 177 2.6E-21 T 22-04-2016 R615_RS04545 215624d232efb77bf309b00b55989f8b 499 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 268 280 2.6E-21 T 22-04-2016 R615_RS04545 215624d232efb77bf309b00b55989f8b 499 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 321 2.6E-21 T 22-04-2016 R615_RS04545 215624d232efb77bf309b00b55989f8b 499 SUPERFAMILY SSF53335 3 481 6.17E-121 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS04545 215624d232efb77bf309b00b55989f8b 499 Pfam PF12161 HsdM N-terminal domain 4 128 1.2E-15 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain R615_RS04545 215624d232efb77bf309b00b55989f8b 499 Pfam PF02384 N-6 DNA Methylase 139 448 1.5E-82 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 R615_RS04545 215624d232efb77bf309b00b55989f8b 499 PANTHER PTHR30195:SF2 105 376 1.4E-47 T 22-04-2016 R615_RS04545 215624d232efb77bf309b00b55989f8b 499 PANTHER PTHR30195 105 376 1.4E-47 T 22-04-2016 R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.97E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.97E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.97E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.97E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.97E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.97E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 247 2.8E-109 T 22-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 186 0.0044 T 22-04-2016 R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 6.5E-59 T 22-04-2016 R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 SUPERFAMILY SSF51735 3 247 3.5E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PANTHER PTHR24322 155 187 1.5E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PANTHER PTHR24322 8 139 1.5E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 Gene3D G3DSA:3.40.50.720 2 247 1.4E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PANTHER PTHR24322:SF328 155 187 1.5E-54 T 22-04-2016 R615_RS08970 638bf8a6b6dff6f440b1ef4f88a0f127 248 PANTHER PTHR24322:SF328 8 139 1.5E-54 T 22-04-2016 R615_RS15745 c6e3456870e04c96206b0e9a7e2b38bc 293 SUPERFAMILY SSF53474 38 290 1.72E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS15745 c6e3456870e04c96206b0e9a7e2b38bc 293 PANTHER PTHR23024:SF47 71 290 2.5E-57 T 22-04-2016 R615_RS15745 c6e3456870e04c96206b0e9a7e2b38bc 293 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 71 87 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 R615_RS15745 c6e3456870e04c96206b0e9a7e2b38bc 293 Pfam PF07859 alpha/beta hydrolase fold 71 269 1.7E-50 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 R615_RS15745 c6e3456870e04c96206b0e9a7e2b38bc 293 Gene3D G3DSA:3.40.50.1820 24 290 7.7E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS15745 c6e3456870e04c96206b0e9a7e2b38bc 293 PANTHER PTHR23024 71 290 2.5E-57 T 22-04-2016 R615_RS13280 bc55703e3abc8a6eed360f7d67994c93 270 PANTHER PTHR12715:SF12 1 268 5.0E-55 T 22-04-2016 R615_RS13280 bc55703e3abc8a6eed360f7d67994c93 270 PANTHER PTHR12715 1 268 5.0E-55 T 22-04-2016 R615_RS13280 bc55703e3abc8a6eed360f7d67994c93 270 SUPERFAMILY SSF103481 10 113 5.23E-16 T 22-04-2016 R615_RS13280 bc55703e3abc8a6eed360f7d67994c93 270 SUPERFAMILY SSF103481 155 256 1.22E-10 T 22-04-2016 R615_RS13280 bc55703e3abc8a6eed360f7d67994c93 270 Pfam PF00892 EamA-like transporter family 122 255 4.3E-23 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS13280 bc55703e3abc8a6eed360f7d67994c93 270 Pfam PF00892 EamA-like transporter family 1 110 2.6E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 448 3.5E-172 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 PANTHER PTHR11649 1 449 1.1E-144 T 22-04-2016 R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 369 448 1.4E-26 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 SUPERFAMILY SSF52540 137 455 1.71E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 Pfam PF01926 50S ribosome-binding GTPase 194 312 2.1E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 Pfam PF01926 50S ribosome-binding GTPase 5 119 2.0E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 1.6E-20 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 191 357 3.2E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 PANTHER PTHR11649:SF5 1 449 1.1E-144 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 SUPERFAMILY SSF52540 4 172 5.87E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 Gene3D G3DSA:3.30.300.20 374 449 5.9E-24 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 Hamap MF_00195 GTPase Der [der]. 2 451 37.356 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 PIRSF PIRSF006485 1 456 6.7E-171 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 Gene3D G3DSA:3.40.50.300 191 373 2.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 Gene3D G3DSA:3.40.50.300 3 187 1.9E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 4.4E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS12360 3af39a38f68ed2d7118fe75cc19056f7 499 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 R615_RS12925 3c9805b88c8a386d80dde43e18263112 194 PANTHER PTHR30390:SF5 1 194 2.1E-112 T 22-04-2016 R615_RS12925 3c9805b88c8a386d80dde43e18263112 194 PANTHER PTHR30390 1 194 2.1E-112 T 22-04-2016 R615_RS12925 3c9805b88c8a386d80dde43e18263112 194 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 36.866 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 R615_RS12925 3c9805b88c8a386d80dde43e18263112 194 SUPERFAMILY SSF53697 2 190 1.13E-56 T 22-04-2016 R615_RS12925 3c9805b88c8a386d80dde43e18263112 194 Gene3D G3DSA:3.40.50.10490 3 191 4.7E-59 T 22-04-2016 R615_RS12925 3c9805b88c8a386d80dde43e18263112 194 Pfam PF13580 SIS domain 13 144 2.2E-36 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 R615_RS14865 94292d2e04efebb083cf2d2f0cfe30a9 222 Pfam PF10277 Frag1/DRAM/Sfk1 family 6 211 2.1E-8 T 22-04-2016 IPR019402 Frag1/DRAM/Sfk1 R615_RS16240 305ab1f0f947ada6b41cd10403502d68 315 SUPERFAMILY SSF48452 207 282 5.87E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS16240 305ab1f0f947ada6b41cd10403502d68 315 Gene3D G3DSA:1.25.40.10 207 283 7.4E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS16240 305ab1f0f947ada6b41cd10403502d68 315 SMART SM00028 255 288 28.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS16240 305ab1f0f947ada6b41cd10403502d68 315 SMART SM00028 221 254 10.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS14500 27ce1314354723d814b093e092b2cbfd 153 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 13 144 22.956 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 R615_RS14500 27ce1314354723d814b093e092b2cbfd 153 Pfam PF01029 NusB family 16 140 8.1E-35 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 R615_RS14500 27ce1314354723d814b093e092b2cbfd 153 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 15 141 1.2E-45 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 R615_RS14500 27ce1314354723d814b093e092b2cbfd 153 PANTHER PTHR11078 12 144 3.4E-50 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 R615_RS14500 27ce1314354723d814b093e092b2cbfd 153 Gene3D G3DSA:1.10.940.10 14 143 8.7E-45 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 R615_RS14500 27ce1314354723d814b093e092b2cbfd 153 SUPERFAMILY SSF48013 13 142 4.32E-44 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 R615_RS14260 1f1694c6f286a9c71e7a2a1d889a1c24 543 PANTHER PTHR24096:SF53 5 542 3.1E-239 T 22-04-2016 R615_RS14260 1f1694c6f286a9c71e7a2a1d889a1c24 543 PANTHER PTHR24096 5 542 3.1E-239 T 22-04-2016 R615_RS14260 1f1694c6f286a9c71e7a2a1d889a1c24 543 SUPERFAMILY SSF56801 5 537 3.27E-129 T 22-04-2016 R615_RS14260 1f1694c6f286a9c71e7a2a1d889a1c24 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 523 3.5E-15 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain R615_RS14260 1f1694c6f286a9c71e7a2a1d889a1c24 543 Gene3D G3DSA:3.40.50.980 47 190 9.7E-28 T 22-04-2016 R615_RS14260 1f1694c6f286a9c71e7a2a1d889a1c24 543 Gene3D G3DSA:2.30.38.10 359 433 9.9E-19 T 22-04-2016 R615_RS14260 1f1694c6f286a9c71e7a2a1d889a1c24 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 22-04-2016 IPR020845 AMP-binding, conserved site R615_RS14260 1f1694c6f286a9c71e7a2a1d889a1c24 543 Pfam PF00501 AMP-binding enzyme 21 439 1.4E-85 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 R615_RS14260 1f1694c6f286a9c71e7a2a1d889a1c24 543 Gene3D G3DSA:3.40.50.980 191 341 2.4E-33 T 22-04-2016 R615_RS14260 1f1694c6f286a9c71e7a2a1d889a1c24 543 Gene3D G3DSA:3.30.300.30 434 533 4.4E-23 T 22-04-2016 R615_RS08190 aaa4fdce7eed2c182148bbc69b06c4ac 607 Pfam PF13145 PPIC-type PPIASE domain 477 566 1.9E-6 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 R615_RS08190 aaa4fdce7eed2c182148bbc69b06c4ac 607 Gene3D G3DSA:3.10.50.40 262 390 8.4E-35 T 22-04-2016 R615_RS08190 aaa4fdce7eed2c182148bbc69b06c4ac 607 PANTHER PTHR10657 241 512 1.0E-72 T 22-04-2016 R615_RS08190 aaa4fdce7eed2c182148bbc69b06c4ac 607 PANTHER PTHR10657 1 170 1.0E-72 T 22-04-2016 R615_RS08190 aaa4fdce7eed2c182148bbc69b06c4ac 607 SUPERFAMILY SSF54534 266 365 1.7E-27 T 22-04-2016 R615_RS08190 aaa4fdce7eed2c182148bbc69b06c4ac 607 SUPERFAMILY SSF109998 201 237 1.41E-25 T 22-04-2016 IPR027304 Trigger factor/SurA domain R615_RS08190 aaa4fdce7eed2c182148bbc69b06c4ac 607 SUPERFAMILY SSF109998 41 167 1.41E-25 T 22-04-2016 IPR027304 Trigger factor/SurA domain R615_RS08190 aaa4fdce7eed2c182148bbc69b06c4ac 607 PANTHER PTHR10657:SF11 241 512 1.0E-72 T 22-04-2016 R615_RS08190 aaa4fdce7eed2c182148bbc69b06c4ac 607 PANTHER PTHR10657:SF11 1 170 1.0E-72 T 22-04-2016 R615_RS08190 aaa4fdce7eed2c182148bbc69b06c4ac 607 Pfam PF13616 PPIC-type PPIASE domain 264 364 2.2E-26 T 22-04-2016 R615_RS08190 aaa4fdce7eed2c182148bbc69b06c4ac 607 Pfam PF13624 SurA N-terminal domain 1 163 2.8E-45 T 22-04-2016 R615_RS05835 5aea2412c0a2fd3d569614b1325e6892 392 Pfam PF04245 37-kD nucleoid-associated bacterial protein 26 378 1.3E-39 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 R615_RS05835 5aea2412c0a2fd3d569614b1325e6892 392 PANTHER PTHR38772 19 306 1.5E-35 T 22-04-2016 R615_RS05835 5aea2412c0a2fd3d569614b1325e6892 392 PANTHER PTHR38772 326 390 1.5E-35 T 22-04-2016 R615_RS00245 0b60348181ed91707088f7c1924e3383 205 Gene3D G3DSA:1.10.3290.10 14 186 4.5E-40 T 22-04-2016 IPR003812 Fido domain R615_RS00245 0b60348181ed91707088f7c1924e3383 205 PANTHER PTHR39560:SF1 1 192 9.5E-29 T 22-04-2016 R615_RS00245 0b60348181ed91707088f7c1924e3383 205 SUPERFAMILY SSF140931 45 183 3.66E-26 T 22-04-2016 IPR003812 Fido domain R615_RS00245 0b60348181ed91707088f7c1924e3383 205 Pfam PF02661 Fic/DOC family 59 157 7.4E-15 T 22-04-2016 IPR003812 Fido domain R615_RS00245 0b60348181ed91707088f7c1924e3383 205 PANTHER PTHR39560 1 192 9.5E-29 T 22-04-2016 R615_RS04720 97f34a27797dccf18ffbcd4f0abeb2eb 375 SUPERFAMILY SSF53756 30 363 8.9E-28 T 22-04-2016 R615_RS04720 97f34a27797dccf18ffbcd4f0abeb2eb 375 Gene3D G3DSA:3.40.50.2000 203 348 5.5E-4 T 22-04-2016 R615_RS04720 97f34a27797dccf18ffbcd4f0abeb2eb 375 PANTHER PTHR12526 202 363 1.4E-17 T 22-04-2016 R615_RS04720 97f34a27797dccf18ffbcd4f0abeb2eb 375 Pfam PF13692 Glycosyl transferases group 1 202 336 1.9E-13 T 22-04-2016 R615_RS01785 7eebacc83fb92a677b09982868fa096f 162 Gene3D G3DSA:2.30.110.20 2 160 1.2E-35 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp R615_RS01785 7eebacc83fb92a677b09982868fa096f 162 PANTHER PTHR36152 19 138 1.8E-22 T 22-04-2016 R615_RS01785 7eebacc83fb92a677b09982868fa096f 162 SUPERFAMILY SSF141452 2 160 1.07E-36 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp R615_RS01785 7eebacc83fb92a677b09982868fa096f 162 Pfam PF05638 Type VI secretion system effector, Hcp 4 135 6.6E-31 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 Pfam PF02355 Protein export membrane protein 437 602 1.7E-19 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 342 594 2.1E-72 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 PANTHER PTHR30081 310 613 2.4E-192 T 22-04-2016 R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 PANTHER PTHR30081 227 285 2.4E-192 T 22-04-2016 R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 PANTHER PTHR30081 1 174 2.4E-192 T 22-04-2016 R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 124 601 6.6E-132 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 SUPERFAMILY SSF82866 409 606 3.66E-40 T 22-04-2016 R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 SUPERFAMILY SSF82866 331 346 3.66E-40 T 22-04-2016 R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 PANTHER PTHR30081:SF1 310 613 2.4E-192 T 22-04-2016 R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 PANTHER PTHR30081:SF1 227 285 2.4E-192 T 22-04-2016 R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 PANTHER PTHR30081:SF1 1 174 2.4E-192 T 22-04-2016 R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 Pfam PF07549 SecD/SecF GG Motif 121 141 1.2E-5 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 617 46.743 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 Pfam PF13721 SecD export protein N-terminal TM region 2 104 2.0E-31 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain R615_RS10730 1345433e0be75098bb2c8f54b784e8ec 619 Gene3D G3DSA:1.20.1640.10 444 605 1.1E-28 T 22-04-2016 R615_RS14770 9f49296b8870f634b093016980a08779 160 PANTHER PTHR10516 129 160 1.7E-39 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type R615_RS14770 9f49296b8870f634b093016980a08779 160 PANTHER PTHR10516 1 83 1.7E-39 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type R615_RS14770 9f49296b8870f634b093016980a08779 160 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 1.4E-15 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 R615_RS14770 9f49296b8870f634b093016980a08779 160 PANTHER PTHR10516:SF316 129 160 1.7E-39 T 22-04-2016 R615_RS14770 9f49296b8870f634b093016980a08779 160 PANTHER PTHR10516:SF316 1 83 1.7E-39 T 22-04-2016 R615_RS14770 9f49296b8870f634b093016980a08779 160 SUPERFAMILY SSF54534 2 140 7.07E-34 T 22-04-2016 R615_RS14770 9f49296b8870f634b093016980a08779 160 Gene3D G3DSA:3.10.50.40 2 80 1.6E-21 T 22-04-2016 R615_RS14770 9f49296b8870f634b093016980a08779 160 Gene3D G3DSA:3.10.50.40 126 140 1.6E-21 T 22-04-2016 R615_RS12445 da5f784d1e9df502f397827f0cfa8c89 265 PANTHER PTHR30622 1 263 2.7E-106 T 22-04-2016 R615_RS12445 da5f784d1e9df502f397827f0cfa8c89 265 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 3.8E-68 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 R615_RS12445 da5f784d1e9df502f397827f0cfa8c89 265 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 16.878 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 R615_RS12445 da5f784d1e9df502f397827f0cfa8c89 265 PANTHER PTHR30622:SF4 1 263 2.7E-106 T 22-04-2016 R615_RS12445 da5f784d1e9df502f397827f0cfa8c89 265 Pfam PF02673 Bacitracin resistance protein BacA 7 258 2.7E-70 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 R615_RS04830 1cc9707d79b08407573508a9abe2a8e1 138 SUPERFAMILY SSF81593 5 126 1.06E-36 T 22-04-2016 R615_RS04830 1cc9707d79b08407573508a9abe2a8e1 138 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 11 127 1.2E-29 T 22-04-2016 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 R615_RS04830 1cc9707d79b08407573508a9abe2a8e1 138 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 10 132 6.2E-41 T 22-04-2016 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 R615_RS04830 1cc9707d79b08407573508a9abe2a8e1 138 Gene3D G3DSA:1.20.120.330 5 129 1.6E-42 T 22-04-2016 R615_RS04800 009751c03c4c509f080a1f1ec515fd01 139 Gene3D G3DSA:1.20.120.330 4 133 2.3E-48 T 22-04-2016 R615_RS04800 009751c03c4c509f080a1f1ec515fd01 139 SUPERFAMILY SSF81593 4 130 2.08E-40 T 22-04-2016 R615_RS04800 009751c03c4c509f080a1f1ec515fd01 139 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 9 132 6.3E-42 T 22-04-2016 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 R615_RS04800 009751c03c4c509f080a1f1ec515fd01 139 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 11 132 2.9E-27 T 22-04-2016 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 ProSitePatterns PS00436 Peroxidases active site signature. 89 100 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 PRINTS PR00458 Haem peroxidase superfamily signature 317 332 1.1E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 PRINTS PR00458 Haem peroxidase superfamily signature 89 103 1.1E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 PRINTS PR00458 Haem peroxidase superfamily signature 258 273 1.1E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 PRINTS PR00458 Haem peroxidase superfamily signature 149 166 1.1E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 PRINTS PR00458 Haem peroxidase superfamily signature 167 179 1.1E-17 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 Hamap MF_01961 Catalase-peroxidase [katG]. 6 731 39.74 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 Pfam PF00141 Peroxidase 405 706 2.3E-39 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 Pfam PF00141 Peroxidase 67 397 2.3E-49 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 Gene3D G3DSA:1.10.420.10 251 273 1.1E-46 T 22-04-2016 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 Gene3D G3DSA:1.10.420.10 309 408 1.1E-46 T 22-04-2016 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 SUPERFAMILY SSF48113 16 429 3.54E-151 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 Gene3D G3DSA:1.10.420.10 583 707 2.8E-42 T 22-04-2016 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 SUPERFAMILY SSF48113 436 731 3.98E-106 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 10 731 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 25 47 4.9E-54 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 51 64 4.9E-54 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 480 506 4.9E-54 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 66 91 4.9E-54 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 266 289 4.9E-54 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 PANTHER PTHR30555:SF0 1 731 0.0 T 22-04-2016 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 PANTHER PTHR30555 1 731 0.0 T 22-04-2016 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 Gene3D G3DSA:1.10.520.10 238 250 2.6E-78 T 22-04-2016 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 Gene3D G3DSA:1.10.520.10 710 731 9.4E-56 T 22-04-2016 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 Gene3D G3DSA:1.10.520.10 46 200 2.6E-78 T 22-04-2016 R615_RS16085 5fcebc7cbae99123ba9bd419811376d5 731 Gene3D G3DSA:1.10.520.10 433 582 9.4E-56 T 22-04-2016 R615_RS02150 a569227bf41f896fdf1511944bc4eeb1 358 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 356 2.2E-100 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 R615_RS02150 a569227bf41f896fdf1511944bc4eeb1 358 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 358 56.194 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 R615_RS02150 a569227bf41f896fdf1511944bc4eeb1 358 Gene3D G3DSA:3.90.1150.10 258 358 6.7E-26 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS02150 a569227bf41f896fdf1511944bc4eeb1 358 SUPERFAMILY SSF53383 15 358 5.98E-74 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS02150 a569227bf41f896fdf1511944bc4eeb1 358 Gene3D G3DSA:3.40.640.10 46 257 1.9E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS02150 a569227bf41f896fdf1511944bc4eeb1 358 PANTHER PTHR11751:SF398 13 357 1.4E-69 T 22-04-2016 R615_RS02150 a569227bf41f896fdf1511944bc4eeb1 358 PANTHER PTHR11751 13 357 1.4E-69 T 22-04-2016 R615_RS02150 a569227bf41f896fdf1511944bc4eeb1 358 Pfam PF00155 Aminotransferase class I and II 29 353 2.3E-49 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 R615_RS16425 f6b760bb7e456534e0459bf47ccb7d0f 230 Gene3D G3DSA:1.10.10.10 3 67 1.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS16425 f6b760bb7e456534e0459bf47ccb7d0f 230 PANTHER PTHR11751 5 91 7.4E-21 T 22-04-2016 R615_RS16425 f6b760bb7e456534e0459bf47ccb7d0f 230 Pfam PF07729 FCD domain 75 198 5.5E-18 T 22-04-2016 IPR011711 GntR, C-terminal R615_RS16425 f6b760bb7e456534e0459bf47ccb7d0f 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 6.1E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS16425 f6b760bb7e456534e0459bf47ccb7d0f 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 6.1E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS16425 f6b760bb7e456534e0459bf47ccb7d0f 230 SMART SM00345 7 65 1.3E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS16425 f6b760bb7e456534e0459bf47ccb7d0f 230 Gene3D G3DSA:1.20.120.530 69 207 5.3E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal R615_RS16425 f6b760bb7e456534e0459bf47ccb7d0f 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 65 3.2E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 R615_RS16425 f6b760bb7e456534e0459bf47ccb7d0f 230 SUPERFAMILY SSF48008 72 206 1.02E-23 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal R615_RS16425 f6b760bb7e456534e0459bf47ccb7d0f 230 SMART SM00895 75 199 1.1E-11 T 22-04-2016 IPR011711 GntR, C-terminal R615_RS16425 f6b760bb7e456534e0459bf47ccb7d0f 230 SUPERFAMILY SSF46785 2 69 1.26E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS08050 e2f9c79cc66487880199650dd2697687 140 PANTHER PTHR30558 6 133 4.7E-36 T 22-04-2016 R615_RS08050 e2f9c79cc66487880199650dd2697687 140 PANTHER PTHR30558:SF5 6 133 4.7E-36 T 22-04-2016 R615_RS08050 e2f9c79cc66487880199650dd2697687 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 135 1.5E-30 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 Gene3D G3DSA:3.40.50.2300 414 536 3.2E-7 T 22-04-2016 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 SUPERFAMILY SSF52172 555 674 1.71E-38 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 Gene3D G3DSA:3.30.450.20 37 174 1.1E-12 T 22-04-2016 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 375 4.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 394 4.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 336 4.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 36 155 3.7E-8 T 22-04-2016 IPR000014 PAS domain R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 SUPERFAMILY SSF55874 223 396 5.11E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 SMART SM00387 281 397 5.8E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 SUPERFAMILY SSF47384 156 235 1.55E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 Gene3D G3DSA:3.30.565.10 235 401 4.1E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 Pfam PF00072 Response regulator receiver domain 560 671 1.9E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 Gene3D G3DSA:1.10.287.130 175 230 1.7E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 SMART SM00448 558 671 8.2E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 281 393 1.3E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 SMART SM00388 169 234 2.5E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 PANTHER PTHR24423 545 676 2.5E-150 T 22-04-2016 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 PANTHER PTHR24423 9 400 2.5E-150 T 22-04-2016 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 SUPERFAMILY SSF52172 416 543 7.39E-8 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 Gene3D G3DSA:3.40.50.2300 548 674 5.0E-44 T 22-04-2016 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 Pfam PF00512 His Kinase A (phospho-acceptor) domain 169 233 3.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 Pfam PF08448 PAS fold 45 149 4.1E-7 T 22-04-2016 IPR013656 PAS fold-4 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 SUPERFAMILY SSF55785 34 147 3.35E-10 T 22-04-2016 IPR000014 PAS domain R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 PANTHER PTHR24423:SF382 545 676 2.5E-150 T 22-04-2016 R615_RS11970 3c1fad7fcca03c7bf330caf79dd57a8d 685 PANTHER PTHR24423:SF382 9 400 2.5E-150 T 22-04-2016 R615_RS16840 552d15b004e87497f2264c548861f075 390 SUPERFAMILY SSF48452 89 190 3.79E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS16840 552d15b004e87497f2264c548861f075 390 SUPERFAMILY SSF48452 311 357 3.79E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS16840 552d15b004e87497f2264c548861f075 390 Pfam PF07219 HemY protein N-terminus 27 133 5.6E-30 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 R615_RS16840 552d15b004e87497f2264c548861f075 390 Gene3D G3DSA:1.25.40.10 90 203 2.4E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS16840 552d15b004e87497f2264c548861f075 390 Gene3D G3DSA:1.25.40.10 279 388 2.4E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS16840 552d15b004e87497f2264c548861f075 390 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 5 386 1.0E-86 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 R615_RS10740 d35486342cfab2872c4ce71611e54875 385 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 362 1.4E-90 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS10740 d35486342cfab2872c4ce71611e54875 385 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 9 369 2.5E-166 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS10740 d35486342cfab2872c4ce71611e54875 385 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 360 56.747 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS10740 d35486342cfab2872c4ce71611e54875 385 Gene3D G3DSA:3.20.20.105 1 367 2.0E-164 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS10740 d35486342cfab2872c4ce71611e54875 385 PANTHER PTHR21148:SF26 1 366 7.5E-171 T 22-04-2016 R615_RS10740 d35486342cfab2872c4ce71611e54875 385 PANTHER PTHR21148 1 366 7.5E-171 T 22-04-2016 R615_RS10740 d35486342cfab2872c4ce71611e54875 385 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 10 369 3.8E-158 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS10740 d35486342cfab2872c4ce71611e54875 385 SUPERFAMILY SSF51713 1 365 2.75E-158 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 R615_RS17605 d37bad33bcbc1cd42e6d60625e9482ff 288 Pfam PF00072 Response regulator receiver domain 7 117 9.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17605 d37bad33bcbc1cd42e6d60625e9482ff 288 SMART SM00448 4 117 2.0E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17605 d37bad33bcbc1cd42e6d60625e9482ff 288 PANTHER PTHR24423:SF374 1 161 8.8E-29 T 22-04-2016 R615_RS17605 d37bad33bcbc1cd42e6d60625e9482ff 288 PANTHER PTHR24423 1 161 8.8E-29 T 22-04-2016 R615_RS17605 d37bad33bcbc1cd42e6d60625e9482ff 288 Gene3D G3DSA:3.40.50.2300 6 120 5.6E-34 T 22-04-2016 R615_RS17605 d37bad33bcbc1cd42e6d60625e9482ff 288 SUPERFAMILY SSF52172 5 120 1.12E-32 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS03425 84c159fa4e86ea21c6a797b4b2aa29af 114 SMART SM00418 22 106 0.0018 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 R615_RS03425 84c159fa4e86ea21c6a797b4b2aa29af 114 Gene3D G3DSA:1.10.10.10 11 108 6.2E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS03425 84c159fa4e86ea21c6a797b4b2aa29af 114 SUPERFAMILY SSF46785 13 111 4.8E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS09470 53c73d6cf729d0fe1a794accd95cdaf0 348 SMART SM00631 1 302 0.0089 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 R615_RS09470 53c73d6cf729d0fe1a794accd95cdaf0 348 SUPERFAMILY SSF53187 38 318 4.96E-47 T 22-04-2016 R615_RS09470 53c73d6cf729d0fe1a794accd95cdaf0 348 Gene3D G3DSA:3.40.630.10 12 287 2.6E-53 T 22-04-2016 R615_RS09470 53c73d6cf729d0fe1a794accd95cdaf0 348 Pfam PF00246 Zinc carboxypeptidase 47 257 4.8E-16 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 R615_RS09470 53c73d6cf729d0fe1a794accd95cdaf0 348 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 59 81 - T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 R615_RS02100 83043d73a7323ff242fd2278188e6650 325 Gene3D G3DSA:3.10.580.10 194 322 7.2E-39 T 22-04-2016 R615_RS02100 83043d73a7323ff242fd2278188e6650 325 Pfam PF01380 SIS domain 42 174 8.0E-31 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 R615_RS02100 83043d73a7323ff242fd2278188e6650 325 PANTHER PTHR11911:SF90 177 322 6.6E-38 T 22-04-2016 R615_RS02100 83043d73a7323ff242fd2278188e6650 325 SMART SM00116 277 324 2.8E-4 T 22-04-2016 IPR000644 CBS domain R615_RS02100 83043d73a7323ff242fd2278188e6650 325 SMART SM00116 212 260 1.2 T 22-04-2016 IPR000644 CBS domain R615_RS02100 83043d73a7323ff242fd2278188e6650 325 Gene3D G3DSA:3.40.50.10490 14 193 1.6E-51 T 22-04-2016 R615_RS02100 83043d73a7323ff242fd2278188e6650 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 47 314 9.4E-108 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 R615_RS02100 83043d73a7323ff242fd2278188e6650 325 PANTHER PTHR11911 177 322 6.6E-38 T 22-04-2016 R615_RS02100 83043d73a7323ff242fd2278188e6650 325 PIRSF PIRSF004692 1 325 9.3E-134 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 R615_RS02100 83043d73a7323ff242fd2278188e6650 325 SUPERFAMILY SSF53697 12 321 5.34E-68 T 22-04-2016 R615_RS02100 83043d73a7323ff242fd2278188e6650 325 Pfam PF00571 CBS domain 203 259 7.4E-4 T 22-04-2016 IPR000644 CBS domain R615_RS02100 83043d73a7323ff242fd2278188e6650 325 Pfam PF00571 CBS domain 271 322 1.8E-8 T 22-04-2016 IPR000644 CBS domain R615_RS15360 7991d3387adc977df9969ad760afff02 145 Pfam PF01250 Ribosomal protein S6 3 91 6.8E-26 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15360 7991d3387adc977df9969ad760afff02 145 PANTHER PTHR21011 1 134 4.7E-38 T 22-04-2016 R615_RS15360 7991d3387adc977df9969ad760afff02 145 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 22-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15360 7991d3387adc977df9969ad760afff02 145 SUPERFAMILY SSF54995 1 101 5.49E-36 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15360 7991d3387adc977df9969ad760afff02 145 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 8.0E-34 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS15360 7991d3387adc977df9969ad760afff02 145 PANTHER PTHR21011:SF1 1 134 4.7E-38 T 22-04-2016 R615_RS15360 7991d3387adc977df9969ad760afff02 145 Gene3D G3DSA:3.30.70.60 1 102 1.5E-39 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 R615_RS15360 7991d3387adc977df9969ad760afff02 145 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 20.905 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 R615_RS17055 373e6d2949c990eb61c726c57d8825de 547 PANTHER PTHR22773 409 440 8.7E-80 T 22-04-2016 R615_RS17055 373e6d2949c990eb61c726c57d8825de 547 PANTHER PTHR22773 2 348 8.7E-80 T 22-04-2016 R615_RS17055 373e6d2949c990eb61c726c57d8825de 547 PANTHER PTHR22773:SF67 409 440 8.7E-80 T 22-04-2016 R615_RS17055 373e6d2949c990eb61c726c57d8825de 547 PANTHER PTHR22773:SF67 2 348 8.7E-80 T 22-04-2016 R615_RS17055 373e6d2949c990eb61c726c57d8825de 547 Pfam PF00361 Proton-conducting membrane transporter 127 400 3.3E-37 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 R615_RS17055 373e6d2949c990eb61c726c57d8825de 547 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 307 319 2.55E-19 T 22-04-2016 R615_RS17055 373e6d2949c990eb61c726c57d8825de 547 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 104 124 2.55E-19 T 22-04-2016 R615_RS17055 373e6d2949c990eb61c726c57d8825de 547 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 2.55E-19 T 22-04-2016 R615_RS17055 373e6d2949c990eb61c726c57d8825de 547 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 151 172 2.55E-19 T 22-04-2016 R615_RS17055 373e6d2949c990eb61c726c57d8825de 547 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 76 101 2.55E-19 T 22-04-2016 R615_RS17055 373e6d2949c990eb61c726c57d8825de 547 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 2.55E-19 T 22-04-2016 R615_RS05130 d910dddbd306402037db3d135c45a5fd 339 SMART SM00448 3 122 2.4E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS05130 d910dddbd306402037db3d135c45a5fd 339 PANTHER PTHR24421:SF16 1 334 8.6E-138 T 22-04-2016 R615_RS05130 d910dddbd306402037db3d135c45a5fd 339 Pfam PF00072 Response regulator receiver domain 5 109 1.2E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS05130 d910dddbd306402037db3d135c45a5fd 339 Pfam PF01339 CheB methylesterase 156 334 3.9E-58 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS05130 d910dddbd306402037db3d135c45a5fd 339 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 339 37.505 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS05130 d910dddbd306402037db3d135c45a5fd 339 SUPERFAMILY SSF52738 153 336 1.7E-60 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS05130 d910dddbd306402037db3d135c45a5fd 339 SUPERFAMILY SSF52172 2 109 8.54E-26 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS05130 d910dddbd306402037db3d135c45a5fd 339 Gene3D G3DSA:3.40.50.180 152 336 3.7E-70 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS05130 d910dddbd306402037db3d135c45a5fd 339 PIRSF PIRSF000876 1 338 1.1E-121 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 R615_RS05130 d910dddbd306402037db3d135c45a5fd 339 Gene3D G3DSA:3.40.50.2300 2 110 8.1E-29 T 22-04-2016 R615_RS05130 d910dddbd306402037db3d135c45a5fd 339 PANTHER PTHR24421 1 334 8.6E-138 T 22-04-2016 R615_RS08395 4820878b084abcd4c248829ca797b324 145 Pfam PF05099 Tellurite resistance protein TerB 15 139 3.9E-35 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal R615_RS08395 4820878b084abcd4c248829ca797b324 145 SUPERFAMILY SSF158682 2 143 1.44E-23 T 22-04-2016 IPR029024 TerB-like R615_RS08395 4820878b084abcd4c248829ca797b324 145 Gene3D G3DSA:1.10.3680.10 5 138 2.2E-14 T 22-04-2016 IPR029024 TerB-like R615_RS07235 c324f1c6bad548514745e17fdbe9cded 575 SUPERFAMILY SSF69349 435 575 2.04E-5 T 22-04-2016 R615_RS07235 c324f1c6bad548514745e17fdbe9cded 575 SUPERFAMILY SSF69255 368 445 5.75E-17 T 22-04-2016 R615_RS07235 c324f1c6bad548514745e17fdbe9cded 575 SUPERFAMILY SSF69279 23 181 2.59E-15 T 22-04-2016 R615_RS07235 c324f1c6bad548514745e17fdbe9cded 575 Pfam PF05954 Phage late control gene D protein (GPD) 67 333 4.7E-11 T 22-04-2016 R615_RS07235 c324f1c6bad548514745e17fdbe9cded 575 Gene3D G3DSA:2.40.50.230 372 445 1.3E-15 T 22-04-2016 IPR006531 Gp5 N-terminal R615_RS07235 c324f1c6bad548514745e17fdbe9cded 575 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 31 488 3.9E-47 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein R615_RS06600 f069c7b4634d5f2bf7be2d90e76b7798 191 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06600 f069c7b4634d5f2bf7be2d90e76b7798 191 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06600 f069c7b4634d5f2bf7be2d90e76b7798 191 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06600 f069c7b4634d5f2bf7be2d90e76b7798 191 Pfam PF00106 short chain dehydrogenase 5 173 3.2E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06600 f069c7b4634d5f2bf7be2d90e76b7798 191 Gene3D G3DSA:3.40.50.720 2 170 3.1E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06600 f069c7b4634d5f2bf7be2d90e76b7798 191 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 173 0.0089 T 22-04-2016 R615_RS06600 f069c7b4634d5f2bf7be2d90e76b7798 191 PANTHER PTHR24322 146 170 1.6E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06600 f069c7b4634d5f2bf7be2d90e76b7798 191 PANTHER PTHR24322 9 129 1.6E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06600 f069c7b4634d5f2bf7be2d90e76b7798 191 SUPERFAMILY SSF51735 2 172 2.75E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08645 09234022ded19b4ee69a154b58829561 387 Pfam PF12693 GspL periplasmic domain 229 383 2.8E-10 T 22-04-2016 IPR025691 GspL periplasmic domain R615_RS08645 09234022ded19b4ee69a154b58829561 387 PIRSF PIRSF015761 5 386 2.4E-27 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 R615_RS08645 09234022ded19b4ee69a154b58829561 387 SUPERFAMILY SSF53067 11 125 1.28E-11 T 22-04-2016 R615_RS08645 09234022ded19b4ee69a154b58829561 387 Pfam PF05134 Type II secretion system (T2SS), protein L 26 126 8.5E-9 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain R615_RS16320 43202a31690773ad4bcae558b1244325 267 SUPERFAMILY SSF69593 27 264 2.88E-47 T 22-04-2016 R615_RS16320 43202a31690773ad4bcae558b1244325 267 Gene3D G3DSA:3.40.1130.10 89 211 6.4E-16 T 22-04-2016 R615_RS16320 43202a31690773ad4bcae558b1244325 267 Pfam PF01553 Acyltransferase 77 205 4.8E-31 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS16320 43202a31690773ad4bcae558b1244325 267 PANTHER PTHR10434 19 265 3.8E-78 T 22-04-2016 R615_RS16320 43202a31690773ad4bcae558b1244325 267 PANTHER PTHR10434:SF20 19 265 3.8E-78 T 22-04-2016 R615_RS16320 43202a31690773ad4bcae558b1244325 267 SMART SM00563 92 207 7.6E-36 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS16320 43202a31690773ad4bcae558b1244325 267 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 87 204 9.0E-33 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 R615_RS15410 c0a5c5714cbeddf7947d137a51e82c8d 313 Pfam PF00561 alpha/beta hydrolase fold 37 149 9.9E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS15410 c0a5c5714cbeddf7947d137a51e82c8d 313 PANTHER PTHR11440 31 143 8.6E-19 T 22-04-2016 R615_RS15410 c0a5c5714cbeddf7947d137a51e82c8d 313 SUPERFAMILY SSF53474 32 309 3.94E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS15410 c0a5c5714cbeddf7947d137a51e82c8d 313 Gene3D G3DSA:3.40.50.1820 29 312 3.0E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS07955 53fd4e64e20839be55bbe1f70cb53462 395 Pfam PF08007 Cupin superfamily protein 10 313 1.2E-91 T 22-04-2016 IPR003347 JmjC domain R615_RS07955 53fd4e64e20839be55bbe1f70cb53462 395 SUPERFAMILY SSF51197 2 294 1.51E-72 T 22-04-2016 R615_RS07955 53fd4e64e20839be55bbe1f70cb53462 395 Gene3D G3DSA:2.60.120.650 3 210 4.4E-39 T 22-04-2016 R615_RS07955 53fd4e64e20839be55bbe1f70cb53462 395 PANTHER PTHR13096 2 211 3.5E-47 T 22-04-2016 R615_RS07955 53fd4e64e20839be55bbe1f70cb53462 395 SMART SM00558 96 220 4.2E-4 T 22-04-2016 IPR003347 JmjC domain R615_RS17750 379546bcce6b8b53f62ef4f260673029 371 PANTHER PTHR38043 1 369 1.3E-44 T 22-04-2016 R615_RS17750 379546bcce6b8b53f62ef4f260673029 371 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 34 355 3.4E-96 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX R615_RS14720 84875bc1a458ff2b1850655c49675a92 185 PANTHER PTHR10681:SF121 1 185 8.9E-89 T 22-04-2016 R615_RS14720 84875bc1a458ff2b1850655c49675a92 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 2.0E-6 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 R615_RS14720 84875bc1a458ff2b1850655c49675a92 185 PIRSF PIRSF000239 2 185 2.2E-52 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 R615_RS14720 84875bc1a458ff2b1850655c49675a92 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 3.4E-103 T 22-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 R615_RS14720 84875bc1a458ff2b1850655c49675a92 185 PANTHER PTHR10681 1 185 8.9E-89 T 22-04-2016 R615_RS14720 84875bc1a458ff2b1850655c49675a92 185 Pfam PF00578 AhpC/TSA family 5 131 5.4E-34 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 R615_RS14720 84875bc1a458ff2b1850655c49675a92 185 SUPERFAMILY SSF52833 2 184 2.85E-55 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS14720 84875bc1a458ff2b1850655c49675a92 185 Gene3D G3DSA:3.40.30.10 2 181 1.0E-62 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS06995 8ae5bc90f42f8522d58ddb30f031c0f6 271 SUPERFAMILY SSF54637 136 267 3.84E-22 T 22-04-2016 IPR029069 HotDog domain R615_RS06995 8ae5bc90f42f8522d58ddb30f031c0f6 271 Pfam PF13622 Thioesterase-like superfamily 20 266 2.5E-48 T 22-04-2016 R615_RS06995 8ae5bc90f42f8522d58ddb30f031c0f6 271 Gene3D G3DSA:3.10.129.10 164 265 1.1E-5 T 22-04-2016 IPR029069 HotDog domain R615_RS06995 8ae5bc90f42f8522d58ddb30f031c0f6 271 Gene3D G3DSA:3.10.129.10 21 109 2.0E-13 T 22-04-2016 IPR029069 HotDog domain R615_RS06995 8ae5bc90f42f8522d58ddb30f031c0f6 271 SUPERFAMILY SSF54637 20 110 6.72E-17 T 22-04-2016 IPR029069 HotDog domain R615_RS06195 1791d413b80db49260ec8d48856d3805 132 Gene3D G3DSA:2.60.120.10 36 74 1.5E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS06195 1791d413b80db49260ec8d48856d3805 132 Pfam PF05523 WxcM-like, C-terminal 5 131 3.0E-51 T 22-04-2016 IPR008894 WxcM-like, C-terminal MetaCyc: PWY-6953|MetaCyc: PWY-7688 R615_RS06195 1791d413b80db49260ec8d48856d3805 132 SUPERFAMILY SSF51182 5 129 8.06E-44 T 22-04-2016 IPR011051 RmlC-like cupin domain R615_RS15640 6a1ebac8a5bc1e92fb3af4dfb9ca41d6 391 Pfam PF01554 MatE 1 121 9.6E-13 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS15640 6a1ebac8a5bc1e92fb3af4dfb9ca41d6 391 Pfam PF01554 MatE 196 349 7.8E-8 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS15640 6a1ebac8a5bc1e92fb3af4dfb9ca41d6 391 PANTHER PTHR11206 1 382 2.4E-74 T 22-04-2016 R615_RS15640 6a1ebac8a5bc1e92fb3af4dfb9ca41d6 391 TIGRFAM TIGR00797 matE: MATE efflux family protein 1 362 1.4E-52 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS15640 6a1ebac8a5bc1e92fb3af4dfb9ca41d6 391 PANTHER PTHR11206:SF94 1 382 2.4E-74 T 22-04-2016 R615_RS00630 2ad4523d90338d21be8490f718a78690 202 Pfam PF08281 Sigma-70, region 4 136 186 2.1E-9 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00630 2ad4523d90338d21be8490f718a78690 202 SUPERFAMILY SSF88659 127 191 3.36E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00630 2ad4523d90338d21be8490f718a78690 202 Gene3D G3DSA:1.10.1740.10 14 98 2.0E-17 T 22-04-2016 R615_RS00630 2ad4523d90338d21be8490f718a78690 202 PANTHER PTHR30173:SF24 13 192 9.2E-28 T 22-04-2016 R615_RS00630 2ad4523d90338d21be8490f718a78690 202 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 190 2.4E-24 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00630 2ad4523d90338d21be8490f718a78690 202 PANTHER PTHR30173 13 192 9.2E-28 T 22-04-2016 R615_RS00630 2ad4523d90338d21be8490f718a78690 202 Pfam PF04542 Sigma-70 region 2 24 79 6.2E-12 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS00630 2ad4523d90338d21be8490f718a78690 202 TIGRFAM TIGR02943 Sig70_famx1: RNA polymerase sigma-70 factor, TIGR02943 family 8 196 3.8E-64 T 22-04-2016 IPR014289 RNA polymerase sigma-24-related R615_RS00630 2ad4523d90338d21be8490f718a78690 202 Gene3D G3DSA:1.10.10.10 128 192 5.0E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00630 2ad4523d90338d21be8490f718a78690 202 SUPERFAMILY SSF88946 13 88 1.28E-16 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 R615_RS07555 abd3c1d6d9d371881a3337b7754e26c3 470 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 349 468 1.6E-26 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain R615_RS07555 abd3c1d6d9d371881a3337b7754e26c3 470 PANTHER PTHR24960 2 388 2.5E-158 T 22-04-2016 R615_RS07555 abd3c1d6d9d371881a3337b7754e26c3 470 Gene3D G3DSA:1.10.1060.10 216 275 5.7E-9 T 22-04-2016 R615_RS07555 abd3c1d6d9d371881a3337b7754e26c3 470 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 267 278 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site R615_RS07555 abd3c1d6d9d371881a3337b7754e26c3 470 Gene3D G3DSA:2.60.40.10 350 469 4.2E-31 T 22-04-2016 IPR013783 Immunoglobulin-like fold R615_RS07555 abd3c1d6d9d371881a3337b7754e26c3 470 Gene3D G3DSA:3.30.70.20 276 329 1.2E-7 T 22-04-2016 R615_RS07555 abd3c1d6d9d371881a3337b7754e26c3 470 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 34 467 2.4E-168 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 R615_RS07555 abd3c1d6d9d371881a3337b7754e26c3 470 PANTHER PTHR24960:SF45 2 388 2.5E-158 T 22-04-2016 R615_RS07555 abd3c1d6d9d371881a3337b7754e26c3 470 Pfam PF12801 4Fe-4S binding domain 91 125 5.2E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain R615_RS07555 abd3c1d6d9d371881a3337b7754e26c3 470 Pfam PF13746 4Fe-4S dicluster domain 212 319 1.6E-47 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain R615_RS07555 abd3c1d6d9d371881a3337b7754e26c3 470 SUPERFAMILY SSF54862 99 120 2.72E-32 T 22-04-2016 R615_RS07555 abd3c1d6d9d371881a3337b7754e26c3 470 SUPERFAMILY SSF54862 162 357 2.72E-32 T 22-04-2016 R615_RS12415 d21e8936e5777b7cab5201fe144c5319 265 Gene3D G3DSA:3.40.1280.10 3 157 3.3E-34 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal R615_RS12415 d21e8936e5777b7cab5201fe144c5319 265 Pfam PF00588 SpoU rRNA Methylase family 5 154 8.3E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 R615_RS12415 d21e8936e5777b7cab5201fe144c5319 265 PIRSF PIRSF004808 1 245 4.2E-73 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 R615_RS12415 d21e8936e5777b7cab5201fe144c5319 265 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 240 8.8E-76 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 R615_RS12415 d21e8936e5777b7cab5201fe144c5319 265 SUPERFAMILY SSF75217 4 159 3.47E-36 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases R615_RS12415 d21e8936e5777b7cab5201fe144c5319 265 PANTHER PTHR12029 4 157 5.8E-32 T 22-04-2016 R615_RS01395 b757dc11a90df1523a1f3f9daad56349 496 PANTHER PTHR32089:SF64 3 9 1.7E-95 T 22-04-2016 R615_RS01395 b757dc11a90df1523a1f3f9daad56349 496 PANTHER PTHR32089:SF64 201 496 1.7E-95 T 22-04-2016 R615_RS01395 b757dc11a90df1523a1f3f9daad56349 496 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 493 2.5E-45 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS01395 b757dc11a90df1523a1f3f9daad56349 496 SUPERFAMILY SSF58104 189 495 5.62E-70 T 22-04-2016 R615_RS01395 b757dc11a90df1523a1f3f9daad56349 496 SMART SM00283 233 494 4.1E-68 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS01395 b757dc11a90df1523a1f3f9daad56349 496 PANTHER PTHR32089 3 9 1.7E-95 T 22-04-2016 R615_RS01395 b757dc11a90df1523a1f3f9daad56349 496 PANTHER PTHR32089 201 496 1.7E-95 T 22-04-2016 R615_RS01395 b757dc11a90df1523a1f3f9daad56349 496 Gene3D G3DSA:1.10.287.950 248 464 6.5E-55 T 22-04-2016 R615_RS03030 43ed9179facd15d413acb1d2a8248072 322 Pfam PF13439 Glycosyltransferase Family 4 3 117 4.7E-15 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain R615_RS03030 43ed9179facd15d413acb1d2a8248072 322 PANTHER PTHR12526 12 308 5.3E-77 T 22-04-2016 R615_RS03030 43ed9179facd15d413acb1d2a8248072 322 PANTHER PTHR12526:SF363 12 308 5.3E-77 T 22-04-2016 R615_RS03030 43ed9179facd15d413acb1d2a8248072 322 Gene3D G3DSA:3.40.50.2000 110 274 7.8E-30 T 22-04-2016 R615_RS03030 43ed9179facd15d413acb1d2a8248072 322 Pfam PF00534 Glycosyl transferases group 1 131 274 2.6E-31 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 R615_RS03030 43ed9179facd15d413acb1d2a8248072 322 SUPERFAMILY SSF53756 9 301 5.38E-67 T 22-04-2016 R615_RS00580 161740af768bb0b9d2c6c2e73006ab06 181 PANTHER PTHR17490 6 173 3.7E-77 T 22-04-2016 R615_RS00580 161740af768bb0b9d2c6c2e73006ab06 181 PANTHER PTHR17490:SF8 6 173 3.7E-77 T 22-04-2016 R615_RS00580 161740af768bb0b9d2c6c2e73006ab06 181 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 3 181 35.313 T 22-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 R615_RS00580 161740af768bb0b9d2c6c2e73006ab06 181 SUPERFAMILY SSF55821 3 178 1.62E-47 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain R615_RS00580 161740af768bb0b9d2c6c2e73006ab06 181 Gene3D G3DSA:3.90.870.10 2 178 3.5E-52 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain R615_RS00580 161740af768bb0b9d2c6c2e73006ab06 181 Pfam PF01300 Telomere recombination 13 174 1.3E-36 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 R615_RS08480 389ac779122f09d187c6b590cb5967ee 439 Gene3D G3DSA:1.20.272.10 236 334 9.7E-45 T 22-04-2016 R615_RS08480 389ac779122f09d187c6b590cb5967ee 439 Gene3D G3DSA:1.10.3710.10 335 433 1.5E-33 T 22-04-2016 R615_RS08480 389ac779122f09d187c6b590cb5967ee 439 Pfam PF16193 AAA C-terminal domain 182 254 4.3E-21 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain R615_RS08480 389ac779122f09d187c6b590cb5967ee 439 PANTHER PTHR13779 13 438 9.3E-199 T 22-04-2016 R615_RS08480 389ac779122f09d187c6b590cb5967ee 439 SMART SM00382 48 164 4.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS08480 389ac779122f09d187c6b590cb5967ee 439 Gene3D G3DSA:3.40.50.300 12 152 2.6E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08480 389ac779122f09d187c6b590cb5967ee 439 PANTHER PTHR13779:SF7 13 438 9.3E-199 T 22-04-2016 R615_RS08480 389ac779122f09d187c6b590cb5967ee 439 Pfam PF12002 MgsA AAA+ ATPase C terminal 255 421 2.6E-68 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal R615_RS08480 389ac779122f09d187c6b590cb5967ee 439 SUPERFAMILY SSF48019 239 421 1.25E-74 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 R615_RS08480 389ac779122f09d187c6b590cb5967ee 439 Gene3D G3DSA:1.10.8.60 153 228 1.6E-14 T 22-04-2016 R615_RS08480 389ac779122f09d187c6b590cb5967ee 439 SUPERFAMILY SSF52540 12 226 8.09E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08480 389ac779122f09d187c6b590cb5967ee 439 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 160 1.2E-15 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS06170 3325fc7382cf0e8f0d77314d60cba38e 353 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 350 3.6E-115 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain R615_RS06170 3325fc7382cf0e8f0d77314d60cba38e 353 Gene3D G3DSA:3.40.50.2000 1 200 2.5E-79 T 22-04-2016 R615_RS06170 3325fc7382cf0e8f0d77314d60cba38e 353 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 352 4.5E-100 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 R615_RS06170 3325fc7382cf0e8f0d77314d60cba38e 353 Gene3D G3DSA:3.40.50.2000 201 352 2.6E-50 T 22-04-2016 R615_RS06170 3325fc7382cf0e8f0d77314d60cba38e 353 PANTHER PTHR18964:SF70 1 350 5.8E-143 T 22-04-2016 R615_RS06170 3325fc7382cf0e8f0d77314d60cba38e 353 SUPERFAMILY SSF53756 1 352 2.23E-110 T 22-04-2016 R615_RS06170 3325fc7382cf0e8f0d77314d60cba38e 353 PANTHER PTHR18964 1 350 5.8E-143 T 22-04-2016 R615_RS07405 8284c36444fa9cd32e6ab6a2e54d3588 465 Gene3D G3DSA:3.30.870.10 298 454 2.0E-34 T 22-04-2016 R615_RS07405 8284c36444fa9cd32e6ab6a2e54d3588 465 Gene3D G3DSA:3.30.870.10 109 297 3.8E-40 T 22-04-2016 R615_RS07405 8284c36444fa9cd32e6ab6a2e54d3588 465 SUPERFAMILY SSF56024 105 298 3.92E-44 T 22-04-2016 R615_RS07405 8284c36444fa9cd32e6ab6a2e54d3588 465 PANTHER PTHR21248 16 465 3.7E-103 T 22-04-2016 R615_RS07405 8284c36444fa9cd32e6ab6a2e54d3588 465 Pfam PF13396 Phospholipase_D-nuclease N-terminal 18 56 1.3E-6 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal R615_RS07405 8284c36444fa9cd32e6ab6a2e54d3588 465 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 18 464 3.4E-108 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 R615_RS07405 8284c36444fa9cd32e6ab6a2e54d3588 465 Pfam PF13091 PLD-like domain 311 430 1.9E-28 T 22-04-2016 IPR025202 Phospholipase D-like domain R615_RS07405 8284c36444fa9cd32e6ab6a2e54d3588 465 Pfam PF13091 PLD-like domain 127 245 5.1E-14 T 22-04-2016 IPR025202 Phospholipase D-like domain R615_RS07405 8284c36444fa9cd32e6ab6a2e54d3588 465 PANTHER PTHR21248:SF9 16 465 3.7E-103 T 22-04-2016 R615_RS07405 8284c36444fa9cd32e6ab6a2e54d3588 465 SMART SM00155 382 409 8.7E-8 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 R615_RS07405 8284c36444fa9cd32e6ab6a2e54d3588 465 SMART SM00155 208 235 4.4E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 R615_RS07405 8284c36444fa9cd32e6ab6a2e54d3588 465 SUPERFAMILY SSF56024 261 451 2.09E-43 T 22-04-2016 R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 Pfam PF08220 DeoR-like helix-turn-helix domain 9 60 1.0E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 PANTHER PTHR30363:SF15 3 257 4.3E-111 T 22-04-2016 R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 Gene3D G3DSA:1.10.10.10 9 56 1.7E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 SMART SM01134 74 235 1.3E-50 T 22-04-2016 R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.3E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.3E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 SMART SM00420 9 61 8.1E-18 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 Pfam PF00455 DeoR C terminal sensor domain 78 234 1.7E-39 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 PANTHER PTHR30363 3 257 4.3E-111 T 22-04-2016 R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 Gene3D G3DSA:3.40.50.1360 76 223 3.9E-14 T 22-04-2016 R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 SUPERFAMILY SSF46785 9 60 8.37E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 SUPERFAMILY SSF100950 77 235 1.26E-28 T 22-04-2016 R615_RS00345 31b581c8522f3e065b3a865ca3437a29 266 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 7.9E-88 T 22-04-2016 R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 PIRSF PIRSF000094 1 261 1.7E-110 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 SUPERFAMILY SSF51735 6 253 5.82E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 PANTHER PTHR24322 11 144 1.2E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 PANTHER PTHR24322 160 192 1.2E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 PANTHER PTHR24322:SF317 11 144 1.2E-63 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 PANTHER PTHR24322:SF317 160 192 1.2E-63 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 Gene3D G3DSA:3.40.50.720 1 253 2.2E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.7E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.7E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.7E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.7E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08195 e87c2994d54efcbb63b04bffe1c6db1a 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.7E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 Pfam PF00694 Aconitase C-terminal domain 720 847 3.5E-47 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PANTHER PTHR11670 779 923 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PANTHER PTHR11670 16 401 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PANTHER PTHR11670 445 679 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PANTHER PTHR11670 695 740 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 ProSitePatterns PS01244 Aconitase family signature 2. 522 535 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 26 920 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 SUPERFAMILY SSF53732 13 655 6.93E-223 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 SUPERFAMILY SSF52016 659 920 6.28E-87 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 Gene3D G3DSA:3.30.499.10 448 603 3.9E-64 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 Gene3D G3DSA:3.30.499.10 377 401 3.9E-64 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 Pfam PF00330 Aconitase family (aconitate hydratase) 82 591 2.5E-183 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PANTHER PTHR11670:SF1 779 923 0.0 T 22-04-2016 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PANTHER PTHR11670:SF1 16 401 0.0 T 22-04-2016 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PANTHER PTHR11670:SF1 445 679 0.0 T 22-04-2016 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PANTHER PTHR11670:SF1 695 740 0.0 T 22-04-2016 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 Gene3D G3DSA:3.30.499.10 32 257 1.1E-80 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 ProSitePatterns PS00450 Aconitase family signature 1. 456 472 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PRINTS PR00415 Aconitase family signature 211 224 1.0E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PRINTS PR00415 Aconitase family signature 287 300 1.0E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PRINTS PR00415 Aconitase family signature 380 394 1.0E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PRINTS PR00415 Aconitase family signature 178 186 1.0E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PRINTS PR00415 Aconitase family signature 522 535 1.0E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PRINTS PR00415 Aconitase family signature 301 314 1.0E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PRINTS PR00415 Aconitase family signature 225 240 1.0E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PRINTS PR00415 Aconitase family signature 154 167 1.0E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 PRINTS PR00415 Aconitase family signature 460 471 1.0E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 Gene3D G3DSA:3.20.19.10 665 920 9.0E-80 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel R615_RS08845 27d0839eff4acd05e862cf427dfa5a08 923 Gene3D G3DSA:3.40.1060.10 258 375 7.2E-37 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 R615_RS02850 6ad00a4a174d272dee037760854cea9b 124 PIRSF PIRSF005610 1 115 3.4E-22 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB R615_RS02850 6ad00a4a174d272dee037760854cea9b 124 PANTHER PTHR39594 1 121 1.5E-21 T 22-04-2016 R615_RS02850 6ad00a4a174d272dee037760854cea9b 124 Pfam PF04247 Invasion gene expression up-regulator, SirB 3 116 2.9E-33 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB R615_RS01025 7ec7c231ee64ff25e80a24d05181dea0 248 PANTHER PTHR30371 2 246 2.4E-94 T 22-04-2016 R615_RS01025 7ec7c231ee64ff25e80a24d05181dea0 248 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 220 6.3E-60 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 R615_RS01025 7ec7c231ee64ff25e80a24d05181dea0 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 2.1E-45 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 R615_RS01025 7ec7c231ee64ff25e80a24d05181dea0 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 102 128 2.1E-45 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 R615_RS01025 7ec7c231ee64ff25e80a24d05181dea0 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 84 102 2.1E-45 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 R615_RS01025 7ec7c231ee64ff25e80a24d05181dea0 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 153 181 2.1E-45 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 R615_RS01025 7ec7c231ee64ff25e80a24d05181dea0 248 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 237 17.474 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 R615_RS01025 7ec7c231ee64ff25e80a24d05181dea0 248 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 225 1.1E-66 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 R615_RS01025 7ec7c231ee64ff25e80a24d05181dea0 248 PANTHER PTHR30371:SF0 2 246 2.4E-94 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 R615_RS09920 e19cf1c70e922ab5d68298317e1a43b6 155 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 17 149 5.4E-30 T 22-04-2016 IPR012816 Conserved hypothetical protein CHP02464 R615_RS09920 e19cf1c70e922ab5d68298317e1a43b6 155 Pfam PF08719 Domain of unknown function (DUF1768) 23 149 1.8E-27 T 22-04-2016 IPR012816 Conserved hypothetical protein CHP02464 R615_RS09920 e19cf1c70e922ab5d68298317e1a43b6 155 SUPERFAMILY SSF143990 6 152 1.23E-45 T 22-04-2016 R615_RS13430 c1a679a24e098486568e69d0f5d7558b 328 PANTHER PTHR30438 6 328 1.2E-72 T 22-04-2016 R615_RS13430 c1a679a24e098486568e69d0f5d7558b 328 SUPERFAMILY SSF111369 42 261 4.05E-14 T 22-04-2016 R615_RS13430 c1a679a24e098486568e69d0f5d7558b 328 Gene3D G3DSA:2.40.50.100 185 217 6.4E-17 T 22-04-2016 R615_RS13430 c1a679a24e098486568e69d0f5d7558b 328 Gene3D G3DSA:2.40.50.100 48 82 6.4E-17 T 22-04-2016 R615_RS13430 c1a679a24e098486568e69d0f5d7558b 328 Pfam PF13437 HlyD family secretion protein 188 291 1.4E-13 T 22-04-2016 R615_RS13430 c1a679a24e098486568e69d0f5d7558b 328 PANTHER PTHR30438:SF1 6 328 1.2E-72 T 22-04-2016 R615_RS13430 c1a679a24e098486568e69d0f5d7558b 328 Pfam PF13533 Biotin-lipoyl like 49 94 2.0E-11 T 22-04-2016 R615_RS03580 b26eb6594b561c9f31dc39ce0321b114 133 PANTHER PTHR33542 11 130 1.7E-14 T 22-04-2016 R615_RS03580 b26eb6594b561c9f31dc39ce0321b114 133 SUPERFAMILY SSF53800 8 126 1.57E-26 T 22-04-2016 R615_RS03580 b26eb6594b561c9f31dc39ce0321b114 133 Pfam PF01903 CbiX 15 123 5.0E-24 T 22-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 R615_RS03580 b26eb6594b561c9f31dc39ce0321b114 133 Gene3D G3DSA:3.40.50.1400 9 125 9.2E-29 T 22-04-2016 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 Gene3D G3DSA:3.90.190.20 316 449 1.3E-39 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 SUPERFAMILY SSF63418 3 101 1.83E-23 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 SUPERFAMILY SSF53244 316 447 4.94E-33 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 Pfam PF08245 Mur ligase middle domain 109 295 3.6E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 Pfam PF01225 Mur ligase family, catalytic domain 28 92 7.5E-7 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 448 32.025 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 390 2.6E-14 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 PANTHER PTHR23135:SF3 14 450 6.7E-148 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 Gene3D G3DSA:3.40.1390.10 4 84 5.8E-21 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 33 447 2.4E-133 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 PANTHER PTHR23135 14 450 6.7E-148 T 22-04-2016 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 SUPERFAMILY SSF53623 106 311 1.44E-56 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13135 d8238bf31e0d065aea8c9141e300afe5 454 Gene3D G3DSA:3.40.1190.10 86 311 3.4E-69 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS17740 496707121ecaba3df647db4f95963a88 829 SUPERFAMILY SSF47384 436 517 7.46E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17740 496707121ecaba3df647db4f95963a88 829 Pfam PF08448 PAS fold 316 424 8.3E-11 T 22-04-2016 IPR013656 PAS fold-4 R615_RS17740 496707121ecaba3df647db4f95963a88 829 Pfam PF08448 PAS fold 197 300 8.9E-6 T 22-04-2016 IPR013656 PAS fold-4 R615_RS17740 496707121ecaba3df647db4f95963a88 829 SUPERFAMILY SSF55785 295 422 8.05E-13 T 22-04-2016 IPR000014 PAS domain R615_RS17740 496707121ecaba3df647db4f95963a88 829 SMART SM00448 701 815 7.1E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17740 496707121ecaba3df647db4f95963a88 829 Pfam PF00512 His Kinase A (phospho-acceptor) domain 452 516 1.3E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17740 496707121ecaba3df647db4f95963a88 829 PANTHER PTHR24423 294 828 1.1E-163 T 22-04-2016 R615_RS17740 496707121ecaba3df647db4f95963a88 829 PANTHER PTHR24423 3 15 1.1E-163 T 22-04-2016 R615_RS17740 496707121ecaba3df647db4f95963a88 829 SUPERFAMILY SSF55874 505 677 4.06E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17740 496707121ecaba3df647db4f95963a88 829 Pfam PF00072 Response regulator receiver domain 703 815 9.7E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS17740 496707121ecaba3df647db4f95963a88 829 SUPERFAMILY SSF52172 701 820 2.7E-37 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS17740 496707121ecaba3df647db4f95963a88 829 Gene3D G3DSA:1.10.287.130 456 501 2.6E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17740 496707121ecaba3df647db4f95963a88 829 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 563 677 3.0E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17740 496707121ecaba3df647db4f95963a88 829 SMART SM00388 451 516 1.0E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17740 496707121ecaba3df647db4f95963a88 829 SMART SM00091 190 257 95.0 T 22-04-2016 IPR000014 PAS domain R615_RS17740 496707121ecaba3df647db4f95963a88 829 SMART SM00091 310 376 4.7E-8 T 22-04-2016 IPR000014 PAS domain R615_RS17740 496707121ecaba3df647db4f95963a88 829 Gene3D G3DSA:3.40.50.2300 701 822 1.6E-42 T 22-04-2016 R615_RS17740 496707121ecaba3df647db4f95963a88 829 SMART SM00387 563 679 3.1E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17740 496707121ecaba3df647db4f95963a88 829 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 657 2.93E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17740 496707121ecaba3df647db4f95963a88 829 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 676 2.93E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17740 496707121ecaba3df647db4f95963a88 829 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 618 2.93E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17740 496707121ecaba3df647db4f95963a88 829 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 632 2.93E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17740 496707121ecaba3df647db4f95963a88 829 Gene3D G3DSA:3.30.450.20 183 296 2.0E-6 T 22-04-2016 R615_RS17740 496707121ecaba3df647db4f95963a88 829 Gene3D G3DSA:3.30.450.20 309 455 5.0E-15 T 22-04-2016 R615_RS17740 496707121ecaba3df647db4f95963a88 829 Gene3D G3DSA:3.30.565.10 502 676 2.0E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17740 496707121ecaba3df647db4f95963a88 829 SUPERFAMILY SSF55785 183 296 2.97E-6 T 22-04-2016 IPR000014 PAS domain R615_RS17740 496707121ecaba3df647db4f95963a88 829 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 308 431 4.0E-7 T 22-04-2016 IPR000014 PAS domain R615_RS15345 30ff509754785a709abbc72b33b07807 148 SUPERFAMILY SSF55653 61 148 4.58E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal R615_RS15345 30ff509754785a709abbc72b33b07807 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 26.174 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15345 30ff509754785a709abbc72b33b07807 148 SUPERFAMILY SSF55658 1 57 4.53E-19 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal R615_RS15345 30ff509754785a709abbc72b33b07807 148 Gene3D G3DSA:3.10.430.100 61 148 7.1E-28 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal R615_RS15345 30ff509754785a709abbc72b33b07807 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 147 5.4E-26 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal R615_RS15345 30ff509754785a709abbc72b33b07807 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal R615_RS15345 30ff509754785a709abbc72b33b07807 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 9.2E-23 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal R615_RS15345 30ff509754785a709abbc72b33b07807 148 PANTHER PTHR21368 1 148 7.4E-53 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15345 30ff509754785a709abbc72b33b07807 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 1.2E-53 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15345 30ff509754785a709abbc72b33b07807 148 Gene3D G3DSA:3.40.5.10 1 52 4.1E-26 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal R615_RS02350 9d1950e29d81d733837fe90af6626f0d 319 PRINTS PR00982 Lysyl-tRNA synthetase signature 74 87 2.9E-9 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 R615_RS02350 9d1950e29d81d733837fe90af6626f0d 319 PRINTS PR00982 Lysyl-tRNA synthetase signature 202 218 2.9E-9 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 R615_RS02350 9d1950e29d81d733837fe90af6626f0d 319 PRINTS PR00982 Lysyl-tRNA synthetase signature 28 38 2.9E-9 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 R615_RS02350 9d1950e29d81d733837fe90af6626f0d 319 PRINTS PR00982 Lysyl-tRNA synthetase signature 92 109 2.9E-9 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 R615_RS02350 9d1950e29d81d733837fe90af6626f0d 319 SUPERFAMILY SSF55681 8 317 8.09E-66 T 22-04-2016 R615_RS02350 9d1950e29d81d733837fe90af6626f0d 319 Gene3D G3DSA:3.30.930.10 10 316 4.2E-58 T 22-04-2016 R615_RS02350 9d1950e29d81d733837fe90af6626f0d 319 PANTHER PTHR22594:SF7 9 318 1.7E-100 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 R615_RS02350 9d1950e29d81d733837fe90af6626f0d 319 Pfam PF00152 tRNA synthetases class II (D, K and N) 9 314 3.4E-37 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS02350 9d1950e29d81d733837fe90af6626f0d 319 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 314 2.0E-107 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 R615_RS02350 9d1950e29d81d733837fe90af6626f0d 319 PANTHER PTHR22594 9 318 1.7E-100 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS02520 179cc1d3cc7581fab7855ae82d2af818 181 PANTHER PTHR23418 28 176 2.8E-33 T 22-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 R615_RS02520 179cc1d3cc7581fab7855ae82d2af818 181 Gene3D G3DSA:2.60.120.10 16 179 2.5E-54 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS02520 179cc1d3cc7581fab7855ae82d2af818 181 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 38.511 T 22-04-2016 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389|UniPathway: UPA00904 R615_RS02520 179cc1d3cc7581fab7855ae82d2af818 181 Pfam PF03079 ARD/ARD' family 5 165 4.4E-37 T 22-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 R615_RS02520 179cc1d3cc7581fab7855ae82d2af818 181 SUPERFAMILY SSF51182 3 178 5.2E-42 T 22-04-2016 IPR011051 RmlC-like cupin domain R615_RS09845 98a2f319a69ab7fadc495bced0d5187c 277 PANTHER PTHR11019:SF52 31 255 6.3E-35 T 22-04-2016 R615_RS09845 98a2f319a69ab7fadc495bced0d5187c 277 SMART SM00342 165 247 1.3E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS09845 98a2f319a69ab7fadc495bced0d5187c 277 PANTHER PTHR11019 31 255 6.3E-35 T 22-04-2016 R615_RS09845 98a2f319a69ab7fadc495bced0d5187c 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 216 231 3.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS09845 98a2f319a69ab7fadc495bced0d5187c 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 231 247 3.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS09845 98a2f319a69ab7fadc495bced0d5187c 277 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 1 120 8.4E-21 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS09845 98a2f319a69ab7fadc495bced0d5187c 277 Pfam PF12833 Helix-turn-helix domain 171 248 1.2E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS09845 98a2f319a69ab7fadc495bced0d5187c 277 Gene3D G3DSA:1.10.10.60 200 254 3.5E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS09845 98a2f319a69ab7fadc495bced0d5187c 277 SUPERFAMILY SSF46689 200 252 1.79E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS16065 1d59c7bea2af21034a8a2feeba04eb37 258 Gene3D G3DSA:3.40.50.150 9 255 1.1E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS16065 1d59c7bea2af21034a8a2feeba04eb37 258 PANTHER PTHR10108 8 198 4.2E-18 T 22-04-2016 R615_RS16065 1d59c7bea2af21034a8a2feeba04eb37 258 Pfam PF13489 Methyltransferase domain 44 188 9.7E-11 T 22-04-2016 R615_RS16065 1d59c7bea2af21034a8a2feeba04eb37 258 SUPERFAMILY SSF53335 9 256 2.76E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS13315 68f130bf8f3a5b8e1218b0af777aa836 373 Gene3D G3DSA:2.40.50.140 182 216 9.7E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS13315 68f130bf8f3a5b8e1218b0af777aa836 373 Gene3D G3DSA:2.40.50.140 78 107 9.7E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS13315 68f130bf8f3a5b8e1218b0af777aa836 373 PANTHER PTHR37296 1 287 1.5E-90 T 22-04-2016 R615_RS13315 68f130bf8f3a5b8e1218b0af777aa836 373 Pfam PF13509 S1 domain 4 63 2.0E-22 T 22-04-2016 R615_RS13315 68f130bf8f3a5b8e1218b0af777aa836 373 Pfam PF13509 S1 domain 75 129 3.1E-8 T 22-04-2016 R615_RS13315 68f130bf8f3a5b8e1218b0af777aa836 373 SMART SM00316 69 130 20.0 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS13315 68f130bf8f3a5b8e1218b0af777aa836 373 SMART SM00316 3 66 32.0 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS13315 68f130bf8f3a5b8e1218b0af777aa836 373 SMART SM00316 151 214 0.005 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 SUPERFAMILY SSF52317 1 192 1.56E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 3.4E-86 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 Pfam PF00117 Glutamine amidotransferase class-I 4 191 1.6E-55 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.3E-14 T 22-04-2016 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 7.3E-14 T 22-04-2016 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.3E-14 T 22-04-2016 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PANTHER PTHR11922 1 193 1.0E-100 T 22-04-2016 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PANTHER PTHR11922:SF7 1 193 1.0E-100 T 22-04-2016 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 Gene3D G3DSA:3.40.50.880 2 191 1.2E-67 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.3E-6 T 22-04-2016 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.3E-6 T 22-04-2016 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PRINTS PR00097 Anthranilate synthase component II signature 99 107 6.3E-37 T 22-04-2016 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PRINTS PR00097 Anthranilate synthase component II signature 169 182 6.3E-37 T 22-04-2016 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PRINTS PR00097 Anthranilate synthase component II signature 2 16 6.3E-37 T 22-04-2016 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PRINTS PR00097 Anthranilate synthase component II signature 119 131 6.3E-37 T 22-04-2016 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PRINTS PR00097 Anthranilate synthase component II signature 47 56 6.3E-37 T 22-04-2016 R615_RS13870 3fd910d5cbc89f0f7af3c2c033462d08 197 PRINTS PR00097 Anthranilate synthase component II signature 74 85 6.3E-37 T 22-04-2016 R615_RS14710 e2a0a92f38c563f2de5217d63a69ef55 164 SUPERFAMILY SSF141868 2 152 1.57E-41 T 22-04-2016 IPR001633 EAL domain R615_RS14710 e2a0a92f38c563f2de5217d63a69ef55 164 PANTHER PTHR33121:SF15 1 162 2.8E-61 T 22-04-2016 R615_RS14710 e2a0a92f38c563f2de5217d63a69ef55 164 Pfam PF00563 EAL domain 6 151 1.0E-32 T 22-04-2016 IPR001633 EAL domain R615_RS14710 e2a0a92f38c563f2de5217d63a69ef55 164 SMART SM00052 1 156 4.1E-9 T 22-04-2016 IPR001633 EAL domain R615_RS14710 e2a0a92f38c563f2de5217d63a69ef55 164 Gene3D G3DSA:3.20.20.450 3 152 2.1E-36 T 22-04-2016 IPR001633 EAL domain R615_RS14710 e2a0a92f38c563f2de5217d63a69ef55 164 PANTHER PTHR33121 1 162 2.8E-61 T 22-04-2016 R615_RS03335 aeafa584a45935196a200814cb3ed632 497 Gene3D G3DSA:1.10.8.60 401 464 6.5E-8 T 22-04-2016 R615_RS03335 aeafa584a45935196a200814cb3ed632 497 SUPERFAMILY SSF52540 232 465 4.83E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03335 aeafa584a45935196a200814cb3ed632 497 SUPERFAMILY SSF52540 87 208 4.44E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03335 aeafa584a45935196a200814cb3ed632 497 PANTHER PTHR23077 138 497 4.7E-108 T 22-04-2016 R615_RS03335 aeafa584a45935196a200814cb3ed632 497 Gene3D G3DSA:3.40.50.300 228 400 8.5E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03335 aeafa584a45935196a200814cb3ed632 497 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 265 391 6.0E-28 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS03335 aeafa584a45935196a200814cb3ed632 497 PANTHER PTHR23077:SF75 138 497 4.7E-108 T 22-04-2016 R615_RS03335 aeafa584a45935196a200814cb3ed632 497 SMART SM00382 261 394 1.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS01390 9059b7a9d75e3fc88efcbf449046f49d 134 SUPERFAMILY SSF48452 53 123 9.07E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS01390 9059b7a9d75e3fc88efcbf449046f49d 134 SMART SM00028 54 87 0.031 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS01390 9059b7a9d75e3fc88efcbf449046f49d 134 SMART SM00028 88 121 290.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS01390 9059b7a9d75e3fc88efcbf449046f49d 134 Gene3D G3DSA:1.25.40.10 51 114 1.6E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS01390 9059b7a9d75e3fc88efcbf449046f49d 134 Pfam PF14559 Tetratricopeptide repeat 65 114 2.9E-6 T 22-04-2016 R615_RS03970 d0e8ee68eedf8ced33fcbe9d0e76747a 365 SUPERFAMILY SSF51197 296 343 8.24E-22 T 22-04-2016 R615_RS03970 d0e8ee68eedf8ced33fcbe9d0e76747a 365 SUPERFAMILY SSF51197 33 255 8.24E-22 T 22-04-2016 R615_RS03970 d0e8ee68eedf8ced33fcbe9d0e76747a 365 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 38 343 4.9E-13 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 R615_RS03970 d0e8ee68eedf8ced33fcbe9d0e76747a 365 Gene3D G3DSA:3.60.130.10 43 244 3.3E-18 T 22-04-2016 R615_RS03970 d0e8ee68eedf8ced33fcbe9d0e76747a 365 Gene3D G3DSA:3.60.130.10 289 345 3.3E-18 T 22-04-2016 R615_RS17090 217d99b9aa9900797f890d1563efb647 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 54 1.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS17090 217d99b9aa9900797f890d1563efb647 182 Gene3D G3DSA:1.10.357.10 2 172 3.9E-24 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS17090 217d99b9aa9900797f890d1563efb647 182 PANTHER PTHR30055 1 176 1.7E-14 T 22-04-2016 R615_RS17090 217d99b9aa9900797f890d1563efb647 182 SUPERFAMILY SSF46689 3 80 9.75E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS17090 217d99b9aa9900797f890d1563efb647 182 SUPERFAMILY SSF48498 76 176 8.45E-11 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal R615_RS02480 92b509b61e755cfb9c1257758c1f3b0b 152 SUPERFAMILY SSF54637 6 141 8.75E-31 T 22-04-2016 IPR029069 HotDog domain R615_RS02480 92b509b61e755cfb9c1257758c1f3b0b 152 PANTHER PTHR31793:SF1 1 151 2.5E-39 T 22-04-2016 R615_RS02480 92b509b61e755cfb9c1257758c1f3b0b 152 Gene3D G3DSA:3.10.129.10 5 135 4.5E-41 T 22-04-2016 IPR029069 HotDog domain R615_RS02480 92b509b61e755cfb9c1257758c1f3b0b 152 PANTHER PTHR31793 1 151 2.5E-39 T 22-04-2016 R615_RS02480 92b509b61e755cfb9c1257758c1f3b0b 152 Pfam PF13279 Thioesterase-like superfamily 15 132 5.8E-18 T 22-04-2016 R615_RS13035 82af75289374f323964790ad6bb11cd5 351 PANTHER PTHR30473 1 351 3.8E-161 T 22-04-2016 R615_RS13035 82af75289374f323964790ad6bb11cd5 351 Gene3D G3DSA:3.40.50.300 126 328 2.2E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13035 82af75289374f323964790ad6bb11cd5 351 PANTHER PTHR30473:SF1 1 351 3.8E-161 T 22-04-2016 R615_RS13035 82af75289374f323964790ad6bb11cd5 351 SUPERFAMILY SSF52540 125 304 3.27E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13035 82af75289374f323964790ad6bb11cd5 351 Pfam PF02562 PhoH-like protein 126 329 6.6E-92 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 Gene3D G3DSA:3.10.20.30 386 448 1.2E-20 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 SUPERFAMILY SSF109604 4 189 8.32E-71 T 22-04-2016 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 Gene3D G3DSA:3.30.70.260 627 698 1.4E-8 T 22-04-2016 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 Pfam PF04607 Region found in RelA / SpoT proteins 235 344 2.6E-35 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 SMART SM00954 235 345 6.1E-62 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 699 2.6E-242 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 SUPERFAMILY SSF81271 374 446 9.37E-22 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 Pfam PF02824 TGS domain 387 446 1.1E-19 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 Pfam PF13328 HD domain 26 175 1.6E-50 T 22-04-2016 IPR003607 HD/PDEase domain R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 SMART SM00471 41 153 4.0E-9 T 22-04-2016 IPR003607 HD/PDEase domain R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 PANTHER PTHR21262 2 704 0.0 T 22-04-2016 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 Gene3D G3DSA:3.30.460.10 178 324 2.3E-46 T 22-04-2016 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 PANTHER PTHR21262:SF0 2 704 0.0 T 22-04-2016 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 Pfam PF13291 ACT domain 625 701 3.2E-15 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 SUPERFAMILY SSF55021 627 702 1.3E-6 T 22-04-2016 R615_RS00860 ec84a00de2c08742430c31c5203110ff 704 SUPERFAMILY SSF81301 180 391 9.16E-62 T 22-04-2016 R615_RS13830 fb3df84b80d3bcabdb6c3a1f4e9473c5 305 PANTHER PTHR30204 5 298 1.2E-23 T 22-04-2016 R615_RS13830 fb3df84b80d3bcabdb6c3a1f4e9473c5 305 SMART SM00422 13 82 8.1E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS13830 fb3df84b80d3bcabdb6c3a1f4e9473c5 305 Gene3D G3DSA:1.10.1660.10 13 90 8.9E-18 T 22-04-2016 R615_RS13830 fb3df84b80d3bcabdb6c3a1f4e9473c5 305 SUPERFAMILY SSF46955 12 93 1.79E-16 T 22-04-2016 IPR009061 Putative DNA-binding domain R615_RS13830 fb3df84b80d3bcabdb6c3a1f4e9473c5 305 PANTHER PTHR30204:SF19 5 298 1.2E-23 T 22-04-2016 R615_RS13830 fb3df84b80d3bcabdb6c3a1f4e9473c5 305 Pfam PF13411 MerR HTH family regulatory protein 13 81 6.1E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08430 8c6cb89ec07494c0fa9ab9b4d1f92328 229 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 R615_RS08430 8c6cb89ec07494c0fa9ab9b4d1f92328 229 Pfam PF00849 RNA pseudouridylate synthase 4 148 1.0E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS08430 8c6cb89ec07494c0fa9ab9b4d1f92328 229 SUPERFAMILY SSF55120 4 166 8.8E-42 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS08430 8c6cb89ec07494c0fa9ab9b4d1f92328 229 PANTHER PTHR21600 122 168 5.7E-75 T 22-04-2016 R615_RS08430 8c6cb89ec07494c0fa9ab9b4d1f92328 229 PANTHER PTHR21600 4 105 5.7E-75 T 22-04-2016 R615_RS08430 8c6cb89ec07494c0fa9ab9b4d1f92328 229 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 8 172 6.6E-52 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 R615_RS08430 8c6cb89ec07494c0fa9ab9b4d1f92328 229 PANTHER PTHR21600:SF23 122 168 5.7E-75 T 22-04-2016 R615_RS08430 8c6cb89ec07494c0fa9ab9b4d1f92328 229 PANTHER PTHR21600:SF23 4 105 5.7E-75 T 22-04-2016 R615_RS14465 298857bfc9b29989d645ca823e47e465 307 Pfam PF10118 Predicted metal-dependent hydrolase 26 272 2.7E-85 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS14465 298857bfc9b29989d645ca823e47e465 307 PANTHER PTHR39456 9 294 5.1E-79 T 22-04-2016 R615_RS14465 298857bfc9b29989d645ca823e47e465 307 PANTHER PTHR39456:SF2 9 294 5.1E-79 T 22-04-2016 R615_RS14465 298857bfc9b29989d645ca823e47e465 307 PIRSF PIRSF007580 10 288 2.1E-80 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS17585 1ed306fa0a4db4726e99bd4a476a6694 289 Pfam PF08907 Domain of unknown function (DUF1853) 21 279 4.1E-51 T 22-04-2016 IPR015003 Protein of unknown function DUF1853 R615_RS12250 dc602ba94620a0d014e56a272879f775 119 PANTHER PTHR33993 1 116 2.3E-60 T 22-04-2016 R615_RS12250 dc602ba94620a0d014e56a272879f775 119 PANTHER PTHR33993:SF1 1 116 2.3E-60 T 22-04-2016 R615_RS12250 dc602ba94620a0d014e56a272879f775 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 1.6E-4 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain R615_RS12250 dc602ba94620a0d014e56a272879f775 119 Gene3D G3DSA:3.10.180.10 7 115 1.7E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase R615_RS12250 dc602ba94620a0d014e56a272879f775 119 SUPERFAMILY SSF54593 6 117 4.68E-21 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase R615_RS10770 0b3e7c3b099c5ed8854508cb8023f326 770 SUPERFAMILY SSF46626 44 115 3.49E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS10770 0b3e7c3b099c5ed8854508cb8023f326 770 Gene3D G3DSA:1.10.760.10 8 123 3.2E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS10770 0b3e7c3b099c5ed8854508cb8023f326 770 Pfam PF00034 Cytochrome c 45 80 1.5E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS14085 7a40ad68678cd4b4e143f035c80a8f43 219 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 9 212 1.6E-65 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 R615_RS14085 7a40ad68678cd4b4e143f035c80a8f43 219 PANTHER PTHR20855 1 213 5.2E-57 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 R615_RS14085 7a40ad68678cd4b4e143f035c80a8f43 219 PANTHER PTHR20855:SF43 1 213 5.2E-57 T 22-04-2016 R615_RS14085 7a40ad68678cd4b4e143f035c80a8f43 219 Pfam PF03006 Haemolysin-III related 7 206 3.1E-48 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 R615_RS02425 a270bf0ea25951306a4de9c7dcaad2a2 162 PANTHER PTHR33540:SF2 1 148 9.4E-39 T 22-04-2016 R615_RS02425 a270bf0ea25951306a4de9c7dcaad2a2 162 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 135 5.4E-42 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 R615_RS02425 a270bf0ea25951306a4de9c7dcaad2a2 162 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 125 1.0E-35 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 R615_RS02425 a270bf0ea25951306a4de9c7dcaad2a2 162 Gene3D G3DSA:3.40.50.300 3 147 1.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02425 a270bf0ea25951306a4de9c7dcaad2a2 162 SUPERFAMILY SSF52540 22 146 1.87E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02425 a270bf0ea25951306a4de9c7dcaad2a2 162 PANTHER PTHR33540 1 148 9.4E-39 T 22-04-2016 R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 261 294 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 Pfam PF03454 MoeA C-terminal region (domain IV) 339 410 5.6E-21 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 PANTHER PTHR10192 6 414 2.9E-182 T 22-04-2016 R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 185 321 6.1E-29 T 22-04-2016 IPR001453 MoaB/Mog domain R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 Gene3D G3DSA:2.170.190.11 57 149 5.2E-26 T 22-04-2016 R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 Pfam PF00994 Probable molybdopterin binding domain 189 324 5.2E-25 T 22-04-2016 IPR001453 MoaB/Mog domain R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 SUPERFAMILY SSF53218 185 328 1.57E-41 T 22-04-2016 IPR001453 MoaB/Mog domain R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 SUPERFAMILY SSF63867 334 414 4.32E-25 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 SMART SM00852 188 325 2.5E-38 T 22-04-2016 IPR001453 MoaB/Mog domain R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 PANTHER PTHR10192:SF11 6 414 2.9E-182 T 22-04-2016 R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 Gene3D G3DSA:3.40.980.10 171 337 8.0E-61 T 22-04-2016 IPR001453 MoaB/Mog domain R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 SUPERFAMILY SSF63882 11 184 1.27E-50 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 Gene3D G3DSA:3.90.105.10 150 170 4.9E-20 T 22-04-2016 R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 Gene3D G3DSA:3.90.105.10 33 56 4.9E-20 T 22-04-2016 R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 Pfam PF03453 MoeA N-terminal region (domain I and II) 15 175 1.0E-37 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS14425 a0cf77adf77da526798e7ca32259309e 415 Gene3D G3DSA:2.40.340.10 338 408 7.2E-32 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 R615_RS16855 245893f736028fc64808901fa429c023 313 Gene3D G3DSA:3.40.190.10 112 200 2.8E-38 T 22-04-2016 R615_RS16855 245893f736028fc64808901fa429c023 313 PANTHER PTHR11557 1 308 1.8E-155 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 Gene3D G3DSA:3.40.190.10 5 111 4.6E-48 T 22-04-2016 R615_RS16855 245893f736028fc64808901fa429c023 313 SUPERFAMILY SSF53850 6 220 3.1E-84 T 22-04-2016 R615_RS16855 245893f736028fc64808901fa429c023 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 227 296 1.5E-21 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 SUPERFAMILY SSF54782 221 308 1.57E-25 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 38.128 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 Gene3D G3DSA:3.30.160.40 223 305 3.1E-25 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 1.6E-77 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 PIRSF PIRSF001438 1 312 2.6E-118 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 2.61E-50 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 2.61E-50 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 2.61E-50 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 2.61E-50 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 2.61E-50 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16855 245893f736028fc64808901fa429c023 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 4.6E-110 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS12245 f72c4fb5870492cb046671cc0ac103da 224 SUPERFAMILY SSF49764 131 223 3.84E-9 T 22-04-2016 IPR008978 HSP20-like chaperone R615_RS12245 f72c4fb5870492cb046671cc0ac103da 224 Pfam PF00011 Hsp20/alpha crystallin family 139 223 1.6E-6 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain R615_RS12245 f72c4fb5870492cb046671cc0ac103da 224 Gene3D G3DSA:2.60.40.790 95 223 8.7E-14 T 22-04-2016 IPR008978 HSP20-like chaperone R615_RS05260 2d30e70af88f6ba200a436612acbadb9 282 SUPERFAMILY SSF53850 91 280 9.91E-22 T 22-04-2016 R615_RS05260 2d30e70af88f6ba200a436612acbadb9 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS05260 2d30e70af88f6ba200a436612acbadb9 282 Gene3D G3DSA:1.10.10.10 1 82 1.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05260 2d30e70af88f6ba200a436612acbadb9 282 PANTHER PTHR30126 1 278 3.9E-88 T 22-04-2016 R615_RS05260 2d30e70af88f6ba200a436612acbadb9 282 Gene3D G3DSA:3.40.190.10 92 171 8.9E-8 T 22-04-2016 R615_RS05260 2d30e70af88f6ba200a436612acbadb9 282 SUPERFAMILY SSF46785 1 80 1.26E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05260 2d30e70af88f6ba200a436612acbadb9 282 Pfam PF03466 LysR substrate binding domain 89 279 3.9E-17 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS05260 2d30e70af88f6ba200a436612acbadb9 282 PANTHER PTHR30126:SF21 1 278 3.9E-88 T 22-04-2016 R615_RS05260 2d30e70af88f6ba200a436612acbadb9 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS05260 2d30e70af88f6ba200a436612acbadb9 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS05260 2d30e70af88f6ba200a436612acbadb9 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS07005 89272d86e5027f247b8aff43b88140a0 149 Gene3D G3DSA:3.10.129.10 14 148 1.5E-17 T 22-04-2016 IPR029069 HotDog domain R615_RS07005 89272d86e5027f247b8aff43b88140a0 149 PANTHER PTHR12418:SF18 1 149 4.1E-43 T 22-04-2016 R615_RS07005 89272d86e5027f247b8aff43b88140a0 149 SUPERFAMILY SSF54637 8 147 1.07E-20 T 22-04-2016 IPR029069 HotDog domain R615_RS07005 89272d86e5027f247b8aff43b88140a0 149 Pfam PF03061 Thioesterase superfamily 65 136 3.6E-9 T 22-04-2016 IPR006683 Thioesterase domain R615_RS07005 89272d86e5027f247b8aff43b88140a0 149 PANTHER PTHR12418 1 149 4.1E-43 T 22-04-2016 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 Gene3D G3DSA:1.10.8.60 666 746 5.1E-29 T 22-04-2016 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 Gene3D G3DSA:1.10.1780.10 1 142 3.2E-44 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 SUPERFAMILY SSF52540 170 417 8.07E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 PANTHER PTHR11638:SF111 1 751 0.0 T 22-04-2016 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 PANTHER PTHR11638 1 751 0.0 T 22-04-2016 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 SMART SM01086 655 744 5.3E-32 T 22-04-2016 IPR019489 Clp ATPase, C-terminal R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 SUPERFAMILY SSF81923 1 142 3.4E-61 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 Gene3D G3DSA:3.40.50.300 172 352 1.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 649 1.5E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 SMART SM00382 208 352 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 SMART SM00382 489 656 3.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 318 9.9E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 Gene3D G3DSA:3.40.50.300 444 665 4.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 4.5E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 3.9E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 3.9E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 3.9E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 3.9E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 SUPERFAMILY SSF52540 439 741 8.3E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 Gene3D G3DSA:1.10.8.60 353 435 2.7E-29 T 22-04-2016 R615_RS08450 d19388d0f6dee6d151bf87ecce7d75ee 752 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 734 3.0E-22 T 22-04-2016 IPR019489 Clp ATPase, C-terminal R615_RS07535 db02efb97afb3524949111e7b16051d7 223 PANTHER PTHR42208 1 213 3.6E-47 T 22-04-2016 R615_RS07535 db02efb97afb3524949111e7b16051d7 223 PANTHER PTHR42208:SF1 1 213 3.6E-47 T 22-04-2016 R615_RS07535 db02efb97afb3524949111e7b16051d7 223 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 10 211 1.5E-52 T 22-04-2016 R615_RS16810 58f563835238f0731b86c62a8ff82d06 130 PANTHER PTHR10584 9 67 6.0E-16 T 22-04-2016 R615_RS16810 58f563835238f0731b86c62a8ff82d06 130 Pfam PF04241 Protein of unknown function (DUF423) 20 106 2.8E-29 T 22-04-2016 IPR006696 Protein of unknown function DUF423 R615_RS16810 58f563835238f0731b86c62a8ff82d06 130 PANTHER PTHR10584:SF191 9 67 6.0E-16 T 22-04-2016 R615_RS12305 3982676eff71139bef636efa61b88e78 166 Gene3D G3DSA:3.30.70.790 73 142 2.1E-27 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 R615_RS12305 3982676eff71139bef636efa61b88e78 166 SMART SM00988 1 66 2.7E-18 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal R615_RS12305 3982676eff71139bef636efa61b88e78 166 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 140 19.876 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 R615_RS12305 3982676eff71139bef636efa61b88e78 166 SUPERFAMILY SSF69287 1 68 3.4E-12 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal R615_RS12305 3982676eff71139bef636efa61b88e78 166 Gene3D G3DSA:2.60.260.20 1 71 5.3E-12 T 22-04-2016 R615_RS12305 3982676eff71139bef636efa61b88e78 166 SUPERFAMILY SSF69737 73 139 8.63E-20 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 R615_RS12305 3982676eff71139bef636efa61b88e78 166 Pfam PF02814 UreE urease accessory protein, N-terminal domain 8 66 1.2E-11 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal R615_RS12305 3982676eff71139bef636efa61b88e78 166 Pfam PF05194 UreE urease accessory protein, C-terminal domain 74 165 2.0E-25 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 R615_RS12305 3982676eff71139bef636efa61b88e78 166 PIRSF PIRSF036402 2 166 4.1E-33 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 R615_RS15200 cfa63cca1aa88d3b65f2d525b505d270 461 Pfam PF00962 Adenosine/AMP deaminase 239 418 1.3E-36 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 R615_RS15200 cfa63cca1aa88d3b65f2d525b505d270 461 SUPERFAMILY SSF51556 12 93 5.53E-66 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS15200 cfa63cca1aa88d3b65f2d525b505d270 461 SUPERFAMILY SSF51556 129 431 5.53E-66 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS15200 cfa63cca1aa88d3b65f2d525b505d270 461 PANTHER PTHR11409 12 72 1.6E-65 T 22-04-2016 R615_RS15200 cfa63cca1aa88d3b65f2d525b505d270 461 PANTHER PTHR11409 111 428 1.6E-65 T 22-04-2016 R615_RS15200 cfa63cca1aa88d3b65f2d525b505d270 461 Gene3D G3DSA:3.20.20.140 121 424 5.6E-70 T 22-04-2016 R615_RS15200 cfa63cca1aa88d3b65f2d525b505d270 461 Gene3D G3DSA:3.20.20.140 28 66 5.6E-70 T 22-04-2016 R615_RS16445 0b9ca0f879b927aadf5ad3aba28faad7 163 SUPERFAMILY SSF53098 8 160 2.78E-14 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS16445 0b9ca0f879b927aadf5ad3aba28faad7 163 Gene3D G3DSA:3.30.420.10 8 162 2.0E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS16285 394b26daf81151903568ba35521e74e6 406 PIRSF PIRSF020818 1 406 2.5E-175 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase R615_RS16285 394b26daf81151903568ba35521e74e6 406 Pfam PF06850 PHB de-polymerase C-terminus 204 405 2.2E-88 T 22-04-2016 IPR009656 PHB de-polymerase, C-terminal R615_RS16285 394b26daf81151903568ba35521e74e6 406 SUPERFAMILY SSF53474 97 403 8.17E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS16285 394b26daf81151903568ba35521e74e6 406 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 404 3.4E-166 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase R615_RS16285 394b26daf81151903568ba35521e74e6 406 Gene3D G3DSA:3.40.50.1820 263 406 3.8E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS16285 394b26daf81151903568ba35521e74e6 406 Gene3D G3DSA:3.40.50.1820 94 231 3.8E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS08715 ed2b09dfe1d50a983e920f822609d43d 121 Pfam PF13473 Cupredoxin-like domain 11 114 8.4E-22 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain R615_RS08715 ed2b09dfe1d50a983e920f822609d43d 121 SUPERFAMILY SSF49503 12 116 1.89E-10 T 22-04-2016 IPR008972 Cupredoxin R615_RS14580 0a8a017a9072556c88d05e86e93c78e5 298 SUPERFAMILY SSF55120 76 264 2.24E-45 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS14580 0a8a017a9072556c88d05e86e93c78e5 298 PANTHER PTHR11079 49 248 1.3E-39 T 22-04-2016 R615_RS14580 0a8a017a9072556c88d05e86e93c78e5 298 PANTHER PTHR11079:SF73 49 248 1.3E-39 T 22-04-2016 R615_RS14580 0a8a017a9072556c88d05e86e93c78e5 298 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 120 134 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS14580 0a8a017a9072556c88d05e86e93c78e5 298 Pfam PF00849 RNA pseudouridylate synthase 82 236 6.5E-24 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 Pfam PF05746 DALR anticodon binding domain 583 678 4.6E-10 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 SMART SM00836 586 682 0.0041 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 SUPERFAMILY SSF109604 359 539 5.83E-16 T 22-04-2016 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 1.4E-208 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 690 25.372 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 690 1.6E-243 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 Gene3D G3DSA:1.10.730.10 583 677 8.4E-7 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 395 414 2.6E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 2.6E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 2.6E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 319 335 2.6E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 2.6E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 R615_RS00085 a3e0e197652dfadffc2705bd2c7f973a 690 PANTHER PTHR30075 1 690 0.0 T 22-04-2016 R615_RS00615 9295f927379492c807d4982c7032e1ac 482 Pfam PF02386 Cation transport protein 51 476 1.7E-86 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 R615_RS00615 9295f927379492c807d4982c7032e1ac 482 PANTHER PTHR32024 1 481 1.2E-229 T 22-04-2016 R615_RS00615 9295f927379492c807d4982c7032e1ac 482 PANTHER PTHR32024:SF2 1 481 1.2E-229 T 22-04-2016 R615_RS00615 9295f927379492c807d4982c7032e1ac 482 PIRSF PIRSF006247 1 482 6.2E-178 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 R615_RS00615 9295f927379492c807d4982c7032e1ac 482 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 465 5.9E-117 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 R615_RS12735 8dcbbfbd3ca7863db24298ca0b8312af 310 PANTHER PTHR34595 1 309 2.5E-94 T 22-04-2016 R615_RS12735 8dcbbfbd3ca7863db24298ca0b8312af 310 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 306 5.5E-92 T 22-04-2016 IPR007296 Domain of unknown function DUF403 R615_RS07310 962b4ee04175c8ca53ef1e3c53b61bb1 334 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 326 2.4E-123 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 R615_RS07310 962b4ee04175c8ca53ef1e3c53b61bb1 334 PANTHER PTHR10361 1 333 1.6E-124 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 R615_RS07310 962b4ee04175c8ca53ef1e3c53b61bb1 334 PANTHER PTHR10361:SF31 1 333 1.6E-124 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 R615_RS07310 962b4ee04175c8ca53ef1e3c53b61bb1 334 Pfam PF01758 Sodium Bile acid symporter family 47 238 3.1E-46 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 R615_RS07310 962b4ee04175c8ca53ef1e3c53b61bb1 334 PIRSF PIRSF005508 1 334 8.0E-121 T 22-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 R615_RS16535 83e7803c1c1cff994cb44b6b587da6af 180 Pfam PF05951 Bacterial protein of unknown function (DUF882) 29 178 2.3E-57 T 22-04-2016 IPR010275 Protein of unknown function DUF882 R615_RS16535 83e7803c1c1cff994cb44b6b587da6af 180 SUPERFAMILY SSF55166 63 179 4.91E-32 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain R615_RS16535 83e7803c1c1cff994cb44b6b587da6af 180 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 29 1.6E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal R615_RS16535 83e7803c1c1cff994cb44b6b587da6af 180 Gene3D G3DSA:3.30.1380.10 65 179 4.0E-30 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain R615_RS16535 83e7803c1c1cff994cb44b6b587da6af 180 PANTHER PTHR37425 1 178 1.2E-51 T 22-04-2016 R615_RS17695 974151432d655eaf0fe5817118df66e4 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.7E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS17695 974151432d655eaf0fe5817118df66e4 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.7E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS17695 974151432d655eaf0fe5817118df66e4 218 Gene3D G3DSA:1.10.357.10 8 214 9.1E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS17695 974151432d655eaf0fe5817118df66e4 218 Pfam PF13305 WHG domain 90 182 1.4E-7 T 22-04-2016 IPR025996 WHG domain R615_RS17695 974151432d655eaf0fe5817118df66e4 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 58 3.5E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS17695 974151432d655eaf0fe5817118df66e4 218 SUPERFAMILY SSF46689 6 77 8.98E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS17695 974151432d655eaf0fe5817118df66e4 218 SUPERFAMILY SSF48498 83 189 3.2E-6 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal R615_RS17695 974151432d655eaf0fe5817118df66e4 218 PANTHER PTHR30055 1 188 2.3E-24 T 22-04-2016 R615_RS07380 634cc4b3468ba0127e361cae8ec4fb62 576 Pfam PF13193 AMP-binding enzyme C-terminal domain 481 555 3.0E-19 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain R615_RS07380 634cc4b3468ba0127e361cae8ec4fb62 576 Gene3D G3DSA:2.30.38.10 391 463 4.3E-31 T 22-04-2016 R615_RS07380 634cc4b3468ba0127e361cae8ec4fb62 576 SUPERFAMILY SSF56801 23 566 1.31E-141 T 22-04-2016 R615_RS07380 634cc4b3468ba0127e361cae8ec4fb62 576 Gene3D G3DSA:3.30.300.30 467 568 2.1E-29 T 22-04-2016 R615_RS07380 634cc4b3468ba0127e361cae8ec4fb62 576 Pfam PF00501 AMP-binding enzyme 33 472 8.4E-103 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 R615_RS07380 634cc4b3468ba0127e361cae8ec4fb62 576 PANTHER PTHR24096 177 564 1.4E-162 T 22-04-2016 R615_RS07380 634cc4b3468ba0127e361cae8ec4fb62 576 PANTHER PTHR24096 18 161 1.4E-162 T 22-04-2016 R615_RS07380 634cc4b3468ba0127e361cae8ec4fb62 576 Gene3D G3DSA:3.40.50.980 25 153 6.9E-32 T 22-04-2016 R615_RS07380 634cc4b3468ba0127e361cae8ec4fb62 576 Gene3D G3DSA:3.40.50.980 188 219 6.9E-32 T 22-04-2016 R615_RS07380 634cc4b3468ba0127e361cae8ec4fb62 576 ProSitePatterns PS00455 Putative AMP-binding domain signature. 214 225 - T 22-04-2016 IPR020845 AMP-binding, conserved site R615_RS07380 634cc4b3468ba0127e361cae8ec4fb62 576 Gene3D G3DSA:3.40.50.980 220 390 2.7E-34 T 22-04-2016 R615_RS16995 9bf3f1a43a9c72cfe1d25dec0c5ebe4e 304 Gene3D G3DSA:3.90.1530.10 41 146 2.3E-40 T 22-04-2016 R615_RS16995 9bf3f1a43a9c72cfe1d25dec0c5ebe4e 304 PANTHER PTHR33375:SF1 1 303 2.0E-92 T 22-04-2016 R615_RS16995 9bf3f1a43a9c72cfe1d25dec0c5ebe4e 304 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 45 217 3.8E-59 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 R615_RS16995 9bf3f1a43a9c72cfe1d25dec0c5ebe4e 304 PANTHER PTHR33375 1 303 2.0E-92 T 22-04-2016 R615_RS16995 9bf3f1a43a9c72cfe1d25dec0c5ebe4e 304 SMART SM00470 48 140 1.3E-37 T 22-04-2016 IPR003115 ParB/Sulfiredoxin R615_RS16995 9bf3f1a43a9c72cfe1d25dec0c5ebe4e 304 SUPERFAMILY SSF110849 47 184 3.4E-34 T 22-04-2016 IPR003115 ParB/Sulfiredoxin R615_RS16995 9bf3f1a43a9c72cfe1d25dec0c5ebe4e 304 Pfam PF02195 ParB-like nuclease domain 50 140 2.0E-28 T 22-04-2016 IPR003115 ParB/Sulfiredoxin R615_RS14065 84c6efa68eed4bae03929139a7cd03ca 636 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 32 599 1.9E-161 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 R615_RS14065 84c6efa68eed4bae03929139a7cd03ca 636 PANTHER PTHR30332 14 606 5.9E-165 T 22-04-2016 R615_RS14065 84c6efa68eed4bae03929139a7cd03ca 636 PRINTS PR00811 Bacterial general secretion pathway protein D signature 422 446 3.6E-35 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS14065 84c6efa68eed4bae03929139a7cd03ca 636 PRINTS PR00811 Bacterial general secretion pathway protein D signature 577 591 3.6E-35 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS14065 84c6efa68eed4bae03929139a7cd03ca 636 PRINTS PR00811 Bacterial general secretion pathway protein D signature 457 467 3.6E-35 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS14065 84c6efa68eed4bae03929139a7cd03ca 636 PRINTS PR00811 Bacterial general secretion pathway protein D signature 554 572 3.6E-35 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS14065 84c6efa68eed4bae03929139a7cd03ca 636 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 3.6E-35 T 22-04-2016 IPR001775 GspD/PilQ family R615_RS14065 84c6efa68eed4bae03929139a7cd03ca 636 PANTHER PTHR30332:SF3 14 606 5.9E-165 T 22-04-2016 R615_RS14065 84c6efa68eed4bae03929139a7cd03ca 636 Pfam PF00263 Bacterial type II and III secretion system protein 426 589 1.4E-50 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 R615_RS14065 84c6efa68eed4bae03929139a7cd03ca 636 Pfam PF03958 Bacterial type II/III secretion system short domain 271 343 2.0E-16 T 22-04-2016 IPR005644 NolW-like R615_RS14065 84c6efa68eed4bae03929139a7cd03ca 636 Pfam PF03958 Bacterial type II/III secretion system short domain 191 263 9.2E-16 T 22-04-2016 IPR005644 NolW-like R615_RS14065 84c6efa68eed4bae03929139a7cd03ca 636 Pfam PF03958 Bacterial type II/III secretion system short domain 127 186 2.4E-8 T 22-04-2016 IPR005644 NolW-like R615_RS14625 26869f0877c8e85014bb0103d33d67ae 602 SUPERFAMILY SSF51569 1 301 8.97E-92 T 22-04-2016 R615_RS14625 26869f0877c8e85014bb0103d33d67ae 602 Gene3D G3DSA:2.40.50.100 530 600 9.4E-22 T 22-04-2016 R615_RS14625 26869f0877c8e85014bb0103d33d67ae 602 PANTHER PTHR18866:SF109 5 600 3.9E-231 T 22-04-2016 R615_RS14625 26869f0877c8e85014bb0103d33d67ae 602 Gene3D G3DSA:3.20.20.70 2 285 3.8E-118 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS14625 26869f0877c8e85014bb0103d33d67ae 602 Pfam PF00682 HMGL-like 6 272 1.7E-50 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 R615_RS14625 26869f0877c8e85014bb0103d33d67ae 602 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 9 597 1.6E-254 T 22-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 R615_RS14625 26869f0877c8e85014bb0103d33d67ae 602 PANTHER PTHR18866 5 600 3.9E-231 T 22-04-2016 R615_RS14625 26869f0877c8e85014bb0103d33d67ae 602 Pfam PF02436 Conserved carboxylase domain 294 484 1.7E-53 T 22-04-2016 IPR003379 Carboxylase, conserved domain R615_RS14625 26869f0877c8e85014bb0103d33d67ae 602 SUPERFAMILY SSF51230 530 600 2.09E-19 T 22-04-2016 IPR011053 Single hybrid motif R615_RS14625 26869f0877c8e85014bb0103d33d67ae 602 SUPERFAMILY SSF89000 299 448 1.26E-48 T 22-04-2016 R615_RS14625 26869f0877c8e85014bb0103d33d67ae 602 Pfam PF00364 Biotin-requiring enzyme 538 600 9.3E-15 T 22-04-2016 IPR000089 Biotin/lipoyl attachment R615_RS16695 0d1ae679f55cc90132aad321172284a3 285 PIRSF PIRSF005261 1 283 4.5E-74 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 R615_RS16695 0d1ae679f55cc90132aad321172284a3 285 PANTHER PTHR30111 9 285 7.4E-61 T 22-04-2016 R615_RS16695 0d1ae679f55cc90132aad321172284a3 285 Hamap MF_00117 33 kDa chaperonin [hslO]. 8 282 28.38 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 R615_RS16695 0d1ae679f55cc90132aad321172284a3 285 SUPERFAMILY SSF118352 224 280 7.32E-17 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 R615_RS16695 0d1ae679f55cc90132aad321172284a3 285 Gene3D G3DSA:1.10.287.480 177 221 1.6E-18 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain R615_RS16695 0d1ae679f55cc90132aad321172284a3 285 SUPERFAMILY SSF64397 9 232 7.98E-65 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 R615_RS16695 0d1ae679f55cc90132aad321172284a3 285 Pfam PF01430 Hsp33 protein 9 270 1.2E-78 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 R615_RS16695 0d1ae679f55cc90132aad321172284a3 285 PANTHER PTHR30111:SF1 9 285 7.4E-61 T 22-04-2016 R615_RS16695 0d1ae679f55cc90132aad321172284a3 285 Gene3D G3DSA:3.90.1280.10 224 280 2.4E-20 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 R615_RS16695 0d1ae679f55cc90132aad321172284a3 285 Gene3D G3DSA:3.55.30.10 8 173 2.2E-54 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 R615_RS08695 6ac749d699258805c15087c91443465b 218 PANTHER PTHR12714 6 210 6.7E-19 T 22-04-2016 R615_RS08695 6ac749d699258805c15087c91443465b 218 Pfam PF04191 Phospholipid methyltransferase 120 193 8.3E-8 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 R615_RS09435 98efaff2cf1217593710ebf0b0e4b2a7 152 Pfam PF14300 Domain of unknown function (DUF4375) 34 151 2.8E-30 T 22-04-2016 IPR025402 Domain of unknown function DUF4375 R615_RS09140 0b4d97a4b575e885b423406113b6ed84 392 PANTHER PTHR30349 1 378 3.6E-124 T 22-04-2016 R615_RS09140 0b4d97a4b575e885b423406113b6ed84 392 Gene3D G3DSA:3.10.310.10 194 370 2.3E-75 T 22-04-2016 R615_RS09140 0b4d97a4b575e885b423406113b6ed84 392 Pfam PF04303 PrpF protein 6 388 7.6E-169 T 22-04-2016 IPR007400 PrpF protein R615_RS09140 0b4d97a4b575e885b423406113b6ed84 392 SUPERFAMILY SSF54506 2 182 4.47E-71 T 22-04-2016 R615_RS09140 0b4d97a4b575e885b423406113b6ed84 392 PANTHER PTHR30349:SF21 1 378 3.6E-124 T 22-04-2016 R615_RS09140 0b4d97a4b575e885b423406113b6ed84 392 Gene3D G3DSA:3.10.310.10 2 193 2.7E-92 T 22-04-2016 R615_RS09140 0b4d97a4b575e885b423406113b6ed84 392 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 392 1.2E-222 T 22-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 R615_RS09140 0b4d97a4b575e885b423406113b6ed84 392 SUPERFAMILY SSF54506 186 391 1.8E-73 T 22-04-2016 R615_RS08595 e7a3194594158d9327c76bd272138a23 249 PANTHER PTHR21294:SF8 1 249 7.6E-147 T 22-04-2016 R615_RS08595 e7a3194594158d9327c76bd272138a23 249 PIRSF PIRSF000090 1 249 3.6E-83 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 R615_RS08595 e7a3194594158d9327c76bd272138a23 249 PANTHER PTHR21294 1 249 7.6E-147 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 R615_RS08595 e7a3194594158d9327c76bd272138a23 249 Gene3D G3DSA:3.40.50.620 1 247 1.2E-102 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS08595 e7a3194594158d9327c76bd272138a23 249 Pfam PF01012 Electron transfer flavoprotein domain 30 206 8.1E-47 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 R615_RS08595 e7a3194594158d9327c76bd272138a23 249 SUPERFAMILY SSF52402 1 242 3.49E-85 T 22-04-2016 R615_RS08595 e7a3194594158d9327c76bd272138a23 249 SMART SM00893 23 211 2.2E-69 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 R615_RS12860 257a7b16e91cdd60c598d33e5c372638 281 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 6 279 3.9E-41 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase R615_RS12860 257a7b16e91cdd60c598d33e5c372638 281 SUPERFAMILY SSF111331 3 279 3.27E-60 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain R615_RS12860 257a7b16e91cdd60c598d33e5c372638 281 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 105 3.7E-22 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 R615_RS12860 257a7b16e91cdd60c598d33e5c372638 281 PANTHER PTHR12358 11 281 8.4E-37 T 22-04-2016 R615_RS04740 43047cde05b04bfe64334bed9eb60f69 319 SUPERFAMILY SSF51735 1 314 2.15E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04740 43047cde05b04bfe64334bed9eb60f69 319 Gene3D G3DSA:3.40.50.720 1 166 7.3E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04740 43047cde05b04bfe64334bed9eb60f69 319 Gene3D G3DSA:3.40.50.720 218 256 7.3E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04740 43047cde05b04bfe64334bed9eb60f69 319 Gene3D G3DSA:3.90.25.10 257 297 3.6E-35 T 22-04-2016 R615_RS04740 43047cde05b04bfe64334bed9eb60f69 319 Gene3D G3DSA:3.90.25.10 167 202 3.6E-35 T 22-04-2016 R615_RS04740 43047cde05b04bfe64334bed9eb60f69 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 227 5.7E-72 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 R615_RS04740 43047cde05b04bfe64334bed9eb60f69 319 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 1 312 47.523 T 22-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 R615_RS04740 43047cde05b04bfe64334bed9eb60f69 319 Gene3D G3DSA:3.90.25.10 203 217 1.5E-11 T 22-04-2016 R615_RS04740 43047cde05b04bfe64334bed9eb60f69 319 Gene3D G3DSA:3.90.25.10 298 315 1.5E-11 T 22-04-2016 R615_RS04740 43047cde05b04bfe64334bed9eb60f69 319 PANTHER PTHR10366:SF246 3 311 6.2E-127 T 22-04-2016 R615_RS04740 43047cde05b04bfe64334bed9eb60f69 319 PANTHER PTHR10366 3 311 6.2E-127 T 22-04-2016 R615_RS08240 e56c0f1f46d1a69f74b49019e8a0be2e 104 PANTHER PTHR10094 23 102 1.8E-24 T 22-04-2016 R615_RS08240 e56c0f1f46d1a69f74b49019e8a0be2e 104 Gene3D G3DSA:3.30.1050.10 4 103 3.1E-31 T 22-04-2016 IPR003033 SCP2 sterol-binding domain R615_RS08240 e56c0f1f46d1a69f74b49019e8a0be2e 104 Pfam PF02036 SCP-2 sterol transfer family 9 102 5.2E-21 T 22-04-2016 IPR003033 SCP2 sterol-binding domain R615_RS08240 e56c0f1f46d1a69f74b49019e8a0be2e 104 SUPERFAMILY SSF55718 2 102 1.01E-29 T 22-04-2016 IPR003033 SCP2 sterol-binding domain R615_RS08240 e56c0f1f46d1a69f74b49019e8a0be2e 104 PANTHER PTHR10094:SF13 23 102 1.8E-24 T 22-04-2016 R615_RS05795 795cd1fa5158636c7c2ca270ce549b8e 480 PANTHER PTHR30508:SF1 2 480 0.0 T 22-04-2016 R615_RS05795 795cd1fa5158636c7c2ca270ce549b8e 480 SUPERFAMILY SSF101960 35 80 9.42E-140 T 22-04-2016 R615_RS05795 795cd1fa5158636c7c2ca270ce549b8e 480 SUPERFAMILY SSF101960 107 477 9.42E-140 T 22-04-2016 R615_RS05795 795cd1fa5158636c7c2ca270ce549b8e 480 PANTHER PTHR30508 2 480 0.0 T 22-04-2016 R615_RS05795 795cd1fa5158636c7c2ca270ce549b8e 480 Pfam PF01458 Uncharacterized protein family (UPF0051) 219 451 1.9E-66 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 R615_RS05795 795cd1fa5158636c7c2ca270ce549b8e 480 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 14 471 6.9E-193 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 R615_RS16700 2804638186d2134bd7365c396dc4a8b2 511 Gene3D G3DSA:3.40.449.10 3 194 2.7E-69 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 R615_RS16700 2804638186d2134bd7365c396dc4a8b2 511 PANTHER PTHR30031:SF0 1 511 3.0E-270 T 22-04-2016 R615_RS16700 2804638186d2134bd7365c396dc4a8b2 511 SUPERFAMILY SSF53795 196 509 4.76E-126 T 22-04-2016 R615_RS16700 2804638186d2134bd7365c396dc4a8b2 511 PANTHER PTHR30031 1 511 3.0E-270 T 22-04-2016 R615_RS16700 2804638186d2134bd7365c396dc4a8b2 511 SUPERFAMILY SSF68923 2 195 1.64E-72 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 R615_RS16700 2804638186d2134bd7365c396dc4a8b2 511 Pfam PF01293 Phosphoenolpyruvate carboxykinase 3 464 4.2E-195 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 R615_RS16700 2804638186d2134bd7365c396dc4a8b2 511 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 2 509 4.0E-188 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 R615_RS16700 2804638186d2134bd7365c396dc4a8b2 511 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 1 510 50.391 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 R615_RS16700 2804638186d2134bd7365c396dc4a8b2 511 Gene3D G3DSA:3.90.228.20 318 508 9.0E-107 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 R615_RS16700 2804638186d2134bd7365c396dc4a8b2 511 Gene3D G3DSA:3.90.228.20 196 258 9.0E-107 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 R615_RS16700 2804638186d2134bd7365c396dc4a8b2 511 PIRSF PIRSF006294 1 510 1.3E-209 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 R615_RS17185 d65647ee0a803618c299b4d902a15c0b 549 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 387 546 4.5E-49 T 22-04-2016 IPR000160 GGDEF domain R615_RS17185 d65647ee0a803618c299b4d902a15c0b 549 PANTHER PTHR10799:SF750 422 544 2.0E-31 T 22-04-2016 R615_RS17185 d65647ee0a803618c299b4d902a15c0b 549 Gene3D G3DSA:3.30.70.270 391 547 3.0E-54 T 22-04-2016 R615_RS17185 d65647ee0a803618c299b4d902a15c0b 549 SMART SM00267 378 549 2.6E-55 T 22-04-2016 IPR000160 GGDEF domain R615_RS17185 d65647ee0a803618c299b4d902a15c0b 549 PANTHER PTHR10799 422 544 2.0E-31 T 22-04-2016 R615_RS17185 d65647ee0a803618c299b4d902a15c0b 549 Pfam PF00990 Diguanylate cyclase, GGDEF domain 389 545 8.3E-45 T 22-04-2016 IPR000160 GGDEF domain R615_RS17185 d65647ee0a803618c299b4d902a15c0b 549 SUPERFAMILY SSF55073 394 547 4.16E-48 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS13465 b14753ac34869c283d3d9821aff62033 414 Pfam PF13692 Glycosyl transferases group 1 199 335 2.1E-17 T 22-04-2016 R615_RS13465 b14753ac34869c283d3d9821aff62033 414 SUPERFAMILY SSF53756 9 370 1.13E-19 T 22-04-2016 R615_RS05310 53bb983a67c296bbcf45e8d485b43eb2 280 PANTHER PTHR13903 1 279 3.3E-101 T 22-04-2016 IPR012093 Pirin R615_RS05310 53bb983a67c296bbcf45e8d485b43eb2 280 Gene3D G3DSA:2.60.120.10 3 252 2.0E-71 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS05310 53bb983a67c296bbcf45e8d485b43eb2 280 SUPERFAMILY SSF51182 6 279 4.74E-74 T 22-04-2016 IPR011051 RmlC-like cupin domain R615_RS05310 53bb983a67c296bbcf45e8d485b43eb2 280 PIRSF PIRSF006232 2 280 4.7E-88 T 22-04-2016 IPR012093 Pirin R615_RS05310 53bb983a67c296bbcf45e8d485b43eb2 280 PANTHER PTHR13903:SF8 1 279 3.3E-101 T 22-04-2016 R615_RS05310 53bb983a67c296bbcf45e8d485b43eb2 280 Pfam PF02678 Pirin 34 120 1.3E-33 T 22-04-2016 IPR003829 Pirin, N-terminal domain R615_RS05310 53bb983a67c296bbcf45e8d485b43eb2 280 Pfam PF05726 Pirin C-terminal cupin domain 179 279 1.1E-28 T 22-04-2016 IPR008778 Pirin, C-terminal domain R615_RS15995 6b2671273d5c9bb19b9527aad0c204ea 798 Pfam PF00912 Transglycosylase 69 242 4.2E-49 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 R615_RS15995 6b2671273d5c9bb19b9527aad0c204ea 798 PANTHER PTHR32282 20 695 8.9E-173 T 22-04-2016 R615_RS15995 6b2671273d5c9bb19b9527aad0c204ea 798 Gene3D G3DSA:3.40.710.10 247 615 3.4E-73 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS15995 6b2671273d5c9bb19b9527aad0c204ea 798 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 707 795 3.6E-11 T 22-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 R615_RS15995 6b2671273d5c9bb19b9527aad0c204ea 798 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 55 798 3.3E-230 T 22-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 R615_RS15995 6b2671273d5c9bb19b9527aad0c204ea 798 PANTHER PTHR32282:SF0 20 695 8.9E-173 T 22-04-2016 R615_RS15995 6b2671273d5c9bb19b9527aad0c204ea 798 SUPERFAMILY SSF53955 56 274 4.22E-64 T 22-04-2016 IPR023346 Lysozyme-like domain R615_RS15995 6b2671273d5c9bb19b9527aad0c204ea 798 Pfam PF00905 Penicillin binding protein transpeptidase domain 319 554 4.0E-15 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 R615_RS15995 6b2671273d5c9bb19b9527aad0c204ea 798 SUPERFAMILY SSF56601 273 637 9.6E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS15995 6b2671273d5c9bb19b9527aad0c204ea 798 SUPERFAMILY SSF56601 224 246 9.6E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like R615_RS15995 6b2671273d5c9bb19b9527aad0c204ea 798 Gene3D G3DSA:1.10.3810.10 74 246 4.5E-52 T 22-04-2016 R615_RS01845 d9a718add3096938052916dad316c07e 143 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 140 3.8E-66 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 R615_RS01845 d9a718add3096938052916dad316c07e 143 PANTHER PTHR11545 1 140 7.0E-75 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 R615_RS01845 d9a718add3096938052916dad316c07e 143 PIRSF PIRSF002181 1 142 4.6E-53 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 R615_RS01845 d9a718add3096938052916dad316c07e 143 SUPERFAMILY SSF52161 1 139 8.24E-62 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 R615_RS01845 d9a718add3096938052916dad316c07e 143 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 R615_RS01845 d9a718add3096938052916dad316c07e 143 Pfam PF00572 Ribosomal protein L13 14 138 1.3E-59 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 R615_RS01845 d9a718add3096938052916dad316c07e 143 Gene3D G3DSA:3.90.1180.10 3 140 6.8E-67 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 R615_RS01845 d9a718add3096938052916dad316c07e 143 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 143 29.746 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 R615_RS02775 37189ca94dc9ce82ad1fa2d99902e661 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 8.0E-14 T 22-04-2016 IPR003004 GspF/PilC family R615_RS02775 37189ca94dc9ce82ad1fa2d99902e661 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 8.0E-14 T 22-04-2016 IPR003004 GspF/PilC family R615_RS02775 37189ca94dc9ce82ad1fa2d99902e661 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 8.0E-14 T 22-04-2016 IPR003004 GspF/PilC family R615_RS02775 37189ca94dc9ce82ad1fa2d99902e661 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 8.0E-14 T 22-04-2016 IPR003004 GspF/PilC family R615_RS02775 37189ca94dc9ce82ad1fa2d99902e661 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 4.5E-28 T 22-04-2016 IPR018076 Type II secretion system F domain R615_RS02775 37189ca94dc9ce82ad1fa2d99902e661 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 9.7E-27 T 22-04-2016 IPR018076 Type II secretion system F domain R615_RS02775 37189ca94dc9ce82ad1fa2d99902e661 407 PANTHER PTHR30012:SF4 2 405 1.8E-160 T 22-04-2016 R615_RS02775 37189ca94dc9ce82ad1fa2d99902e661 407 PANTHER PTHR30012 2 405 1.8E-160 T 22-04-2016 R615_RS05965 2384e0b9c56aa3605d793382997e47ec 605 SUPERFAMILY SSF53474 235 529 8.73E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS05965 2384e0b9c56aa3605d793382997e47ec 605 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 63 597 1.5E-231 T 22-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 R615_RS05965 2384e0b9c56aa3605d793382997e47ec 605 PANTHER PTHR36837:SF2 70 598 1.2E-227 T 22-04-2016 R615_RS05965 2384e0b9c56aa3605d793382997e47ec 605 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 106 278 2.6E-72 T 22-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- R615_RS05965 2384e0b9c56aa3605d793382997e47ec 605 Gene3D G3DSA:3.40.50.1820 213 564 1.0E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS05965 2384e0b9c56aa3605d793382997e47ec 605 PANTHER PTHR36837 70 598 1.2E-227 T 22-04-2016 R615_RS11935 648a5405014784f3b90b76a43a13fbff 287 SUPERFAMILY SSF160240 210 287 5.1E-20 T 22-04-2016 R615_RS11935 648a5405014784f3b90b76a43a13fbff 287 SUPERFAMILY SSF161111 9 207 1.96E-47 T 22-04-2016 R615_RS11935 648a5405014784f3b90b76a43a13fbff 287 PANTHER PTHR11562:SF55 9 286 3.1E-85 T 22-04-2016 R615_RS11935 648a5405014784f3b90b76a43a13fbff 287 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 284 4.2E-66 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS11935 648a5405014784f3b90b76a43a13fbff 287 PANTHER PTHR11562 9 286 3.1E-85 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS11935 648a5405014784f3b90b76a43a13fbff 287 Gene3D G3DSA:1.20.1510.10 11 206 3.4E-40 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain R615_RS11935 648a5405014784f3b90b76a43a13fbff 287 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 1.2E-22 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain R615_RS11935 648a5405014784f3b90b76a43a13fbff 287 Gene3D G3DSA:3.30.70.1350 207 287 1.4E-24 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain R615_RS11935 648a5405014784f3b90b76a43a13fbff 287 Pfam PF01545 Cation efflux family 15 206 9.9E-36 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS17615 cf9b440fb0b96fdf1c2f5f0ab7c75c21 148 Pfam PF13511 Domain of unknown function (DUF4124) 18 65 1.6E-11 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 R615_RS02505 658e16bd9891cfcdfdc44bd350c967d6 505 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 29 116 3.1E-8 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 R615_RS02505 658e16bd9891cfcdfdc44bd350c967d6 505 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 196 492 7.2E-51 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath R615_RS02505 658e16bd9891cfcdfdc44bd350c967d6 505 PANTHER PTHR35565 126 423 2.0E-33 T 22-04-2016 R615_RS11920 e37190ca31de8ba5b6e903b0812890da 314 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 R615_RS11920 e37190ca31de8ba5b6e903b0812890da 314 SUPERFAMILY SSF53686 3 306 1.96E-96 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme R615_RS11920 e37190ca31de8ba5b6e903b0812890da 314 PANTHER PTHR10314:SF110 1 310 1.2E-153 T 22-04-2016 R615_RS11920 e37190ca31de8ba5b6e903b0812890da 314 Gene3D G3DSA:3.40.50.1100 41 137 1.9E-38 T 22-04-2016 R615_RS11920 e37190ca31de8ba5b6e903b0812890da 314 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 297 6.7E-67 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme R615_RS11920 e37190ca31de8ba5b6e903b0812890da 314 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 309 6.8E-133 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 R615_RS11920 e37190ca31de8ba5b6e903b0812890da 314 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 309 7.0E-130 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 R615_RS11920 e37190ca31de8ba5b6e903b0812890da 314 PANTHER PTHR10314 1 310 1.2E-153 T 22-04-2016 R615_RS11920 e37190ca31de8ba5b6e903b0812890da 314 Gene3D G3DSA:3.40.50.1100 1 40 8.0E-69 T 22-04-2016 R615_RS11920 e37190ca31de8ba5b6e903b0812890da 314 Gene3D G3DSA:3.40.50.1100 149 310 8.0E-69 T 22-04-2016 R615_RS12430 8ef8e53a7b16f99d32bc8395e6a86703 81 PANTHER PTHR36508 8 81 1.9E-12 T 22-04-2016 R615_RS12430 8ef8e53a7b16f99d32bc8395e6a86703 81 Pfam PF04102 SlyX 16 81 4.2E-16 T 22-04-2016 IPR007236 SlyX R615_RS12430 8ef8e53a7b16f99d32bc8395e6a86703 81 Gene3D G3DSA:1.20.5.300 14 57 2.7E-5 T 22-04-2016 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 Gene3D G3DSA:3.30.365.10 624 776 7.6E-87 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 Gene3D G3DSA:3.30.365.10 364 453 7.6E-87 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 Gene3D G3DSA:3.30.365.10 180 285 4.7E-35 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 PANTHER PTHR11908:SF66 587 786 0.0 T 22-04-2016 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 PANTHER PTHR11908:SF66 24 568 0.0 T 22-04-2016 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 Gene3D G3DSA:3.90.1170.50 24 138 1.1E-29 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 25 778 0.0 T 22-04-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 37 140 1.3E-17 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 161 709 1.7E-204 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 SUPERFAMILY SSF56003 146 776 5.89E-200 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 SMART SM01008 37 144 2.9E-28 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 Gene3D G3DSA:3.30.365.10 288 363 2.7E-19 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 Gene3D G3DSA:3.30.365.10 139 179 2.7E-19 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 SUPERFAMILY SSF54665 18 142 1.13E-29 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 Gene3D G3DSA:3.30.365.10 454 613 5.5E-51 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 PANTHER PTHR11908 587 786 0.0 T 22-04-2016 R615_RS15170 b67b7eb87d917e39817b9dae347431de 792 PANTHER PTHR11908 24 568 0.0 T 22-04-2016 R615_RS04825 9f8c1f36794fb5555994b24733eeb7de 99 Gene3D G3DSA:3.30.460.10 3 98 1.0E-20 T 22-04-2016 R615_RS04825 9f8c1f36794fb5555994b24733eeb7de 99 SUPERFAMILY SSF81301 11 92 2.8E-13 T 22-04-2016 R615_RS04825 9f8c1f36794fb5555994b24733eeb7de 99 Pfam PF01909 Nucleotidyltransferase domain 13 85 2.7E-7 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 R615_RS08290 684d39fe61f8f977a89098586d2319cf 100 SUPERFAMILY SSF141371 7 84 9.02E-12 T 22-04-2016 R615_RS08290 684d39fe61f8f977a89098586d2319cf 100 Gene3D G3DSA:2.40.10.220 7 82 9.2E-7 T 22-04-2016 R615_RS08290 684d39fe61f8f977a89098586d2319cf 100 Pfam PF07238 PilZ domain 10 89 2.0E-6 T 22-04-2016 IPR009875 PilZ domain GO:0035438 R615_RS10105 a3cbbd2a42f86f3e0196f566b5deb6f4 190 Gene3D G3DSA:1.10.340.30 5 184 2.1E-76 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 R615_RS10105 a3cbbd2a42f86f3e0196f566b5deb6f4 190 SUPERFAMILY SSF48150 6 186 2.69E-71 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 R615_RS10105 a3cbbd2a42f86f3e0196f566b5deb6f4 190 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 6 183 2.1E-74 T 22-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 R615_RS10105 a3cbbd2a42f86f3e0196f566b5deb6f4 190 PANTHER PTHR30037:SF4 4 186 1.3E-97 T 22-04-2016 R615_RS10105 a3cbbd2a42f86f3e0196f566b5deb6f4 190 PANTHER PTHR30037 4 186 1.3E-97 T 22-04-2016 R615_RS10105 a3cbbd2a42f86f3e0196f566b5deb6f4 190 Pfam PF03352 Methyladenine glycosylase 12 183 2.4E-71 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 R615_RS16195 5d6a35a82f0046440ad27917fd7e7718 195 PANTHER PTHR33219:SF5 8 195 8.2E-52 T 22-04-2016 R615_RS16195 5d6a35a82f0046440ad27917fd7e7718 195 PANTHER PTHR33219 8 195 8.2E-52 T 22-04-2016 R615_RS16195 5d6a35a82f0046440ad27917fd7e7718 195 Pfam PF02325 YGGT family 110 177 3.3E-16 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 R615_RS16195 5d6a35a82f0046440ad27917fd7e7718 195 Pfam PF02325 YGGT family 14 80 3.5E-15 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 R615_RS01355 51401584d5f63d7c513c17ca1d33cfc0 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 196 224 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 R615_RS01355 51401584d5f63d7c513c17ca1d33cfc0 309 PANTHER PTHR11825:SF7 5 307 2.0E-117 T 22-04-2016 R615_RS01355 51401584d5f63d7c513c17ca1d33cfc0 309 PANTHER PTHR11825 5 307 2.0E-117 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 R615_RS01355 51401584d5f63d7c513c17ca1d33cfc0 309 Gene3D G3DSA:3.30.470.10 10 132 8.3E-42 T 22-04-2016 R615_RS01355 51401584d5f63d7c513c17ca1d33cfc0 309 Gene3D G3DSA:3.20.10.10 136 297 2.2E-59 T 22-04-2016 R615_RS01355 51401584d5f63d7c513c17ca1d33cfc0 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 13 308 3.6E-136 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 R615_RS01355 51401584d5f63d7c513c17ca1d33cfc0 309 SUPERFAMILY SSF56752 5 305 1.83E-104 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 R615_RS01355 51401584d5f63d7c513c17ca1d33cfc0 309 Pfam PF01063 Amino-transferase class IV 38 268 5.7E-54 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 R615_RS00840 2e69581b7c7cd8145936913fa0af4642 299 Gene3D G3DSA:1.10.10.10 1 82 1.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00840 2e69581b7c7cd8145936913fa0af4642 299 Pfam PF03466 LysR substrate binding domain 88 291 2.1E-43 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS00840 2e69581b7c7cd8145936913fa0af4642 299 Gene3D G3DSA:3.40.190.10 176 270 1.1E-29 T 22-04-2016 R615_RS00840 2e69581b7c7cd8145936913fa0af4642 299 PANTHER PTHR30346 1 290 2.7E-96 T 22-04-2016 R615_RS00840 2e69581b7c7cd8145936913fa0af4642 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.61E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS00840 2e69581b7c7cd8145936913fa0af4642 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.61E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS00840 2e69581b7c7cd8145936913fa0af4642 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.61E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS00840 2e69581b7c7cd8145936913fa0af4642 299 SUPERFAMILY SSF46785 1 85 1.62E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00840 2e69581b7c7cd8145936913fa0af4642 299 SUPERFAMILY SSF53850 88 295 8.22E-39 T 22-04-2016 R615_RS00840 2e69581b7c7cd8145936913fa0af4642 299 Gene3D G3DSA:3.40.190.10 93 175 6.4E-15 T 22-04-2016 R615_RS00840 2e69581b7c7cd8145936913fa0af4642 299 PANTHER PTHR30346:SF15 1 290 2.7E-96 T 22-04-2016 R615_RS00840 2e69581b7c7cd8145936913fa0af4642 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.5E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS03290 358051805ce8f5ed5a0461220f4c6cb1 540 SUPERFAMILY SSF52402 254 522 1.28E-75 T 22-04-2016 R615_RS03290 358051805ce8f5ed5a0461220f4c6cb1 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 272 516 3.1E-58 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 R615_RS03290 358051805ce8f5ed5a0461220f4c6cb1 540 Gene3D G3DSA:3.40.50.620 259 520 7.9E-74 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS03290 358051805ce8f5ed5a0461220f4c6cb1 540 Pfam PF00795 Carbon-nitrogen hydrolase 7 247 1.9E-23 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS03290 358051805ce8f5ed5a0461220f4c6cb1 540 PANTHER PTHR23090 2 534 4.7E-158 T 22-04-2016 R615_RS03290 358051805ce8f5ed5a0461220f4c6cb1 540 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 37 52 - T 22-04-2016 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 R615_RS03290 358051805ce8f5ed5a0461220f4c6cb1 540 SUPERFAMILY SSF56317 4 243 3.66E-58 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS03290 358051805ce8f5ed5a0461220f4c6cb1 540 Gene3D G3DSA:3.60.110.10 4 258 1.1E-57 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS03290 358051805ce8f5ed5a0461220f4c6cb1 540 Pfam PF02540 NAD synthase 265 513 2.1E-71 T 22-04-2016 IPR022310 NAD/GMP synthase R615_RS01990 3633057631eb177c150957c815338c0e 85 SUPERFAMILY SSF47598 1 43 1.89E-9 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 R615_RS01990 3633057631eb177c150957c815338c0e 85 PANTHER PTHR36582:SF3 1 61 2.9E-14 T 22-04-2016 R615_RS01990 3633057631eb177c150957c815338c0e 85 PANTHER PTHR36582 1 61 2.9E-14 T 22-04-2016 R615_RS01990 3633057631eb177c150957c815338c0e 85 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 3 59 5.4E-8 T 22-04-2016 IPR022789 Antitoxin ParD R615_RS01990 3633057631eb177c150957c815338c0e 85 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 1 61 9.8E-16 T 22-04-2016 IPR022789 Antitoxin ParD R615_RS02095 78a5b73c4c8d5e5d06384bf5f9ad0b00 189 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 185 5.8E-36 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 R615_RS02095 78a5b73c4c8d5e5d06384bf5f9ad0b00 189 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 11 185 2.2E-35 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related R615_RS02095 78a5b73c4c8d5e5d06384bf5f9ad0b00 189 PANTHER PTHR37481:SF1 1 189 7.0E-26 T 22-04-2016 R615_RS02095 78a5b73c4c8d5e5d06384bf5f9ad0b00 189 PANTHER PTHR37481 1 189 7.0E-26 T 22-04-2016 R615_RS02095 78a5b73c4c8d5e5d06384bf5f9ad0b00 189 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 1 188 19.575 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 R615_RS11255 7006f5689608500409d7808f001b855d 76 SUPERFAMILY SSF52833 1 76 5.17E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11255 7006f5689608500409d7808f001b855d 76 Gene3D G3DSA:3.40.30.10 2 76 2.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11255 7006f5689608500409d7808f001b855d 76 PANTHER PTHR36450 2 76 7.6E-29 T 22-04-2016 R615_RS11255 7006f5689608500409d7808f001b855d 76 PANTHER PTHR36450:SF1 2 76 7.6E-29 T 22-04-2016 R615_RS11255 7006f5689608500409d7808f001b855d 76 PIRSF PIRSF037031 1 76 9.3E-27 T 22-04-2016 IPR005243 Redox-active disulphide protein 2 R615_RS11255 7006f5689608500409d7808f001b855d 76 Pfam PF13192 Thioredoxin domain 3 76 8.9E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS17180 2a3d0ed3a076f98ea9077a5f2c7a2b92 455 Pfam PF00082 Subtilase family 209 429 3.9E-20 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 R615_RS17180 2a3d0ed3a076f98ea9077a5f2c7a2b92 455 Gene3D G3DSA:3.40.50.200 208 454 9.6E-43 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 R615_RS17180 2a3d0ed3a076f98ea9077a5f2c7a2b92 455 PANTHER PTHR10795:SF356 208 454 5.2E-24 T 22-04-2016 R615_RS17180 2a3d0ed3a076f98ea9077a5f2c7a2b92 455 PRINTS PR00723 Subtilisin serine protease family (S8) signature 242 255 6.8E-6 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17180 2a3d0ed3a076f98ea9077a5f2c7a2b92 455 PRINTS PR00723 Subtilisin serine protease family (S8) signature 206 225 6.8E-6 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17180 2a3d0ed3a076f98ea9077a5f2c7a2b92 455 PRINTS PR00723 Subtilisin serine protease family (S8) signature 400 416 6.8E-6 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17180 2a3d0ed3a076f98ea9077a5f2c7a2b92 455 PANTHER PTHR10795 208 454 5.2E-24 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related R615_RS17180 2a3d0ed3a076f98ea9077a5f2c7a2b92 455 SUPERFAMILY SSF52743 188 453 1.22E-44 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 393 1.2E-121 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 Gene3D G3DSA:3.40.47.10 6 126 1.4E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 Gene3D G3DSA:3.40.47.10 198 278 1.4E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 Gene3D G3DSA:3.40.47.10 279 394 2.8E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 Gene3D G3DSA:3.40.47.10 146 197 2.8E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 Pfam PF02803 Thiolase, C-terminal domain 273 393 1.7E-40 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 SUPERFAMILY SSF53901 273 394 1.4E-37 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 PANTHER PTHR18919 2 395 4.4E-203 T 22-04-2016 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 PANTHER PTHR18919:SF110 2 395 4.4E-203 T 22-04-2016 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 SUPERFAMILY SSF53901 7 271 7.77E-75 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 PIRSF PIRSF000429 1 395 5.6E-109 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 R615_RS13955 8432944785bb9209363f8aef07891dd7 395 Pfam PF00108 Thiolase, N-terminal domain 7 265 1.8E-83 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 R615_RS17355 8079f369c95bc409233ad6e0b081bc9a 320 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 169 1.7E-53 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 R615_RS17355 8079f369c95bc409233ad6e0b081bc9a 320 SUPERFAMILY SSF46785 3 83 6.26E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS17355 8079f369c95bc409233ad6e0b081bc9a 320 PANTHER PTHR34298:SF2 1 318 1.8E-73 T 22-04-2016 R615_RS17355 8079f369c95bc409233ad6e0b081bc9a 320 Gene3D G3DSA:1.10.10.10 84 160 2.4E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS17355 8079f369c95bc409233ad6e0b081bc9a 320 SUPERFAMILY SSF46785 84 160 1.01E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS17355 8079f369c95bc409233ad6e0b081bc9a 320 Gene3D G3DSA:1.10.10.10 2 82 4.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS17355 8079f369c95bc409233ad6e0b081bc9a 320 PANTHER PTHR34298 1 318 1.8E-73 T 22-04-2016 R615_RS17355 8079f369c95bc409233ad6e0b081bc9a 320 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 173 3.2E-36 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 R615_RS07660 935e66611f29415eefd24af1764547eb 236 Pfam PF02517 CAAX protease self-immunity 136 215 4.9E-5 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 R615_RS13640 b532dc390443c4236fe070c0593f6cdc 179 SUPERFAMILY SSF55846 4 178 9.42E-64 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 R615_RS13640 b532dc390443c4236fe070c0593f6cdc 179 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 167 4.4E-19 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 R615_RS13640 b532dc390443c4236fe070c0593f6cdc 179 SMART SM00644 16 166 1.1E-46 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 R615_RS13640 b532dc390443c4236fe070c0593f6cdc 179 Gene3D G3DSA:3.40.80.10 3 178 1.9E-66 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 R615_RS13640 b532dc390443c4236fe070c0593f6cdc 179 PANTHER PTHR30417:SF4 1 178 6.0E-73 T 22-04-2016 R615_RS13640 b532dc390443c4236fe070c0593f6cdc 179 PANTHER PTHR30417 1 178 6.0E-73 T 22-04-2016 R615_RS06495 31962dfb76d5ca7ed67c8b7e1d7232b3 504 Pfam PF02321 Outer membrane efflux protein 87 287 6.1E-13 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS06495 31962dfb76d5ca7ed67c8b7e1d7232b3 504 Pfam PF02321 Outer membrane efflux protein 318 488 6.1E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS06495 31962dfb76d5ca7ed67c8b7e1d7232b3 504 Gene3D G3DSA:1.20.1600.10 87 484 1.8E-26 T 22-04-2016 R615_RS06495 31962dfb76d5ca7ed67c8b7e1d7232b3 504 SUPERFAMILY SSF56954 11 31 7.24E-30 T 22-04-2016 R615_RS06495 31962dfb76d5ca7ed67c8b7e1d7232b3 504 SUPERFAMILY SSF56954 66 489 7.24E-30 T 22-04-2016 R615_RS15220 c676db13961284ba25a787cd1289ec3c 170 Pfam PF01618 MotA/TolQ/ExbB proton channel family 59 164 4.1E-20 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 R615_RS15220 c676db13961284ba25a787cd1289ec3c 170 PANTHER PTHR30625 1 158 5.8E-18 T 22-04-2016 R615_RS14005 cd1804e6caa121daedf34c278126bb4d 644 Gene3D G3DSA:1.10.220.30 391 491 2.1E-14 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical R615_RS14005 cd1804e6caa121daedf34c278126bb4d 644 Gene3D G3DSA:1.10.220.30 509 635 1.1E-15 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical R615_RS14005 cd1804e6caa121daedf34c278126bb4d 644 PANTHER PTHR30534:SF0 398 644 1.3E-18 T 22-04-2016 R615_RS14005 cd1804e6caa121daedf34c278126bb4d 644 SUPERFAMILY SSF48029 426 635 5.49E-31 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical R615_RS14005 cd1804e6caa121daedf34c278126bb4d 644 Pfam PF08345 Flagellar M-ring protein C-terminal 54 227 6.7E-6 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal R615_RS14005 cd1804e6caa121daedf34c278126bb4d 644 Pfam PF01706 FliG C-terminal domain 528 634 7.8E-16 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal R615_RS14005 cd1804e6caa121daedf34c278126bb4d 644 PANTHER PTHR30534 398 644 1.3E-18 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 R615_RS14005 cd1804e6caa121daedf34c278126bb4d 644 Pfam PF14841 FliG middle domain 426 495 3.1E-10 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PANTHER PTHR30009:SF0 1 418 3.7E-294 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PANTHER PTHR30009:SF0 467 653 3.7E-294 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 Pfam PF01578 Cytochrome C assembly protein 89 296 4.3E-55 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.3E-89 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.3E-89 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.3E-89 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.3E-89 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.3E-89 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.3E-89 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.3E-89 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.3E-89 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 635 1.1E-116 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PANTHER PTHR30009 1 418 3.7E-294 T 22-04-2016 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PANTHER PTHR30009 467 653 3.7E-294 T 22-04-2016 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 628 641 3.6E-51 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.6E-51 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.6E-51 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.6E-51 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.6E-51 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.6E-51 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.6E-51 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11795 1590afb3193d5c30a29d9b624529997f 658 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 55 638 4.3E-230 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS05560 b3f1ecad98d2324ca362f2dcd3bf6c29 101 Gene3D G3DSA:3.30.70.900 6 94 4.0E-10 T 22-04-2016 R615_RS05560 b3f1ecad98d2324ca362f2dcd3bf6c29 101 Pfam PF07045 Domain of unknown function (DUF1330) 6 83 5.9E-7 T 22-04-2016 IPR010753 Domain of unknown function DUF1330 R615_RS05560 b3f1ecad98d2324ca362f2dcd3bf6c29 101 SUPERFAMILY SSF54909 1 94 2.95E-11 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel R615_RS00965 6500258ee48ac8ab73a54592a580b05e 85 Gene3D G3DSA:3.30.70.20 3 76 2.4E-18 T 22-04-2016 R615_RS00965 6500258ee48ac8ab73a54592a580b05e 85 SUPERFAMILY SSF54862 3 76 4.83E-19 T 22-04-2016 R615_RS00965 6500258ee48ac8ab73a54592a580b05e 85 PANTHER PTHR24960 1 77 8.3E-26 T 22-04-2016 R615_RS00965 6500258ee48ac8ab73a54592a580b05e 85 PANTHER PTHR24960:SF38 1 77 8.3E-26 T 22-04-2016 R615_RS00965 6500258ee48ac8ab73a54592a580b05e 85 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site R615_RS00965 6500258ee48ac8ab73a54592a580b05e 85 Pfam PF00037 4Fe-4S binding domain 4 25 5.0E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain R615_RS09505 c30104e22592f40b9c14477f7e9ad9f6 140 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 17 136 0.002 T 22-04-2016 IPR020143 Uncharacterised protein family, RP436 R615_RS09505 c30104e22592f40b9c14477f7e9ad9f6 140 PANTHER PTHR30353 1 136 3.2E-46 T 22-04-2016 IPR032818 DedA family R615_RS09505 c30104e22592f40b9c14477f7e9ad9f6 140 Pfam PF09335 SNARE associated Golgi protein 34 136 6.5E-16 T 22-04-2016 IPR032816 SNARE associated Golgi protein R615_RS09505 c30104e22592f40b9c14477f7e9ad9f6 140 PANTHER PTHR30353:SF12 1 136 3.2E-46 T 22-04-2016 R615_RS06320 e727c52542c7a7d8d2bafed9eaee958d 196 SUPERFAMILY SSF52172 1 129 3.98E-31 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS06320 e727c52542c7a7d8d2bafed9eaee958d 196 Gene3D G3DSA:3.40.50.2300 1 136 2.1E-32 T 22-04-2016 R615_RS06320 e727c52542c7a7d8d2bafed9eaee958d 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 136 150 2.1E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS06320 e727c52542c7a7d8d2bafed9eaee958d 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 166 2.1E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS06320 e727c52542c7a7d8d2bafed9eaee958d 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 178 2.1E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS06320 e727c52542c7a7d8d2bafed9eaee958d 196 Gene3D G3DSA:1.10.10.10 137 196 1.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS06320 e727c52542c7a7d8d2bafed9eaee958d 196 SMART SM00421 133 190 2.5E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS06320 e727c52542c7a7d8d2bafed9eaee958d 196 PANTHER PTHR26402 2 189 6.9E-52 T 22-04-2016 R615_RS06320 e727c52542c7a7d8d2bafed9eaee958d 196 Pfam PF00072 Response regulator receiver domain 4 115 4.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS06320 e727c52542c7a7d8d2bafed9eaee958d 196 SUPERFAMILY SSF46894 125 195 5.1E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS06320 e727c52542c7a7d8d2bafed9eaee958d 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 188 6.0E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS06320 e727c52542c7a7d8d2bafed9eaee958d 196 SMART SM00448 2 115 7.8E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS16395 1130e69d06a46ef98a4368d35feb3b5a 81 Pfam PF04380 Membrane fusogenic activity 5 75 1.8E-18 T 22-04-2016 IPR007475 Membrane fusogenic activity R615_RS05995 7b06a5e4e9e2ee30a0e3edf733859954 105 Pfam PF10262 Rdx family 5 78 6.4E-25 T 22-04-2016 IPR011893 Selenoprotein, Rdx type R615_RS05995 7b06a5e4e9e2ee30a0e3edf733859954 105 PANTHER PTHR36417:SF2 1 105 1.2E-25 T 22-04-2016 R615_RS05995 7b06a5e4e9e2ee30a0e3edf733859954 105 Gene3D G3DSA:3.40.30.10 2 94 2.1E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS05995 7b06a5e4e9e2ee30a0e3edf733859954 105 SUPERFAMILY SSF52833 3 87 6.93E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS05995 7b06a5e4e9e2ee30a0e3edf733859954 105 PANTHER PTHR36417 1 105 1.2E-25 T 22-04-2016 R615_RS05995 7b06a5e4e9e2ee30a0e3edf733859954 105 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 4.2E-13 T 22-04-2016 IPR011893 Selenoprotein, Rdx type R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 PANTHER PTHR30154:SF19 3 159 2.3E-75 T 22-04-2016 R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 SUPERFAMILY SSF54909 71 159 3.43E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 Gene3D G3DSA:3.30.70.920 64 149 1.1E-28 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 Gene3D G3DSA:1.10.10.10 12 62 6.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 8.9E-16 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 8.9E-16 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 8.9E-16 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 SUPERFAMILY SSF46785 6 96 2.41E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 1.6E-18 T 22-04-2016 R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 PANTHER PTHR30154 3 159 2.3E-75 T 22-04-2016 R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 4.6E-23 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain R615_RS04265 68f196859ccf4e729342ab36963b8dae 167 SMART SM00344 11 121 6.7E-42 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 R615_RS02170 cbe5fd873b17e8b0466c2be90258cb04 310 PIRSF PIRSF016660 1 310 1.9E-115 T 22-04-2016 IPR008526 Inner membrane protein YedI R615_RS02170 cbe5fd873b17e8b0466c2be90258cb04 310 PANTHER PTHR30503 2 310 1.1E-90 T 22-04-2016 R615_RS02170 cbe5fd873b17e8b0466c2be90258cb04 310 Pfam PF05661 Protein of unknown function (DUF808) 5 299 3.1E-111 T 22-04-2016 IPR008526 Inner membrane protein YedI R615_RS10765 cbe70bc63928ff460578ae72f153c929 647 Pfam PF07695 7TM diverse intracellular signalling 193 393 3.2E-52 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 R615_RS10765 cbe70bc63928ff460578ae72f153c929 647 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 479 645 1.8E-53 T 22-04-2016 IPR000160 GGDEF domain R615_RS10765 cbe70bc63928ff460578ae72f153c929 647 Gene3D G3DSA:3.30.70.270 485 647 5.8E-55 T 22-04-2016 R615_RS10765 cbe70bc63928ff460578ae72f153c929 647 PANTHER PTHR10799 1 647 4.2E-22 T 22-04-2016 R615_RS10765 cbe70bc63928ff460578ae72f153c929 647 SMART SM00267 472 646 5.1E-62 T 22-04-2016 IPR000160 GGDEF domain R615_RS10765 cbe70bc63928ff460578ae72f153c929 647 PANTHER PTHR10799:SF710 1 647 4.2E-22 T 22-04-2016 R615_RS10765 cbe70bc63928ff460578ae72f153c929 647 SUPERFAMILY SSF55073 488 646 1.1E-48 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS10765 cbe70bc63928ff460578ae72f153c929 647 Pfam PF00990 Diguanylate cyclase, GGDEF domain 484 642 1.9E-48 T 22-04-2016 IPR000160 GGDEF domain R615_RS10765 cbe70bc63928ff460578ae72f153c929 647 Pfam PF07696 7TMR-DISM extracellular 2 47 178 6.1E-31 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 R615_RS03455 534d58ed2744068a73425bcbf90d8b4a 648 Pfam PF01464 Transglycosylase SLT domain 472 581 6.2E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 R615_RS03455 534d58ed2744068a73425bcbf90d8b4a 648 SUPERFAMILY SSF53955 467 614 4.97E-44 T 22-04-2016 IPR023346 Lysozyme-like domain R615_RS03455 534d58ed2744068a73425bcbf90d8b4a 648 SUPERFAMILY SSF48435 28 466 8.24E-92 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 R615_RS03455 534d58ed2744068a73425bcbf90d8b4a 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 398 461 1.4E-14 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 R615_RS03455 534d58ed2744068a73425bcbf90d8b4a 648 Gene3D G3DSA:1.10.1240.20 398 461 4.7E-14 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 R615_RS03455 534d58ed2744068a73425bcbf90d8b4a 648 Gene3D G3DSA:1.10.530.10 464 618 1.6E-45 T 22-04-2016 R615_RS03455 534d58ed2744068a73425bcbf90d8b4a 648 PANTHER PTHR21666 452 612 1.2E-47 T 22-04-2016 R615_RS03455 534d58ed2744068a73425bcbf90d8b4a 648 Gene3D G3DSA:1.25.20.10 30 374 1.3E-69 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 Gene3D G3DSA:2.40.30.10 194 280 4.0E-29 T 22-04-2016 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 SUPERFAMILY SSF51905 341 398 1.22E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 SUPERFAMILY SSF51905 3 192 1.22E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 9.4E-125 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 Gene3D G3DSA:3.50.50.60 5 191 6.5E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 Gene3D G3DSA:3.50.50.60 343 398 6.5E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 351 373 8.7E-7 T 22-04-2016 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 8.7E-7 T 22-04-2016 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.7E-7 T 22-04-2016 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 SUPERFAMILY SSF160996 195 342 4.05E-37 T 22-04-2016 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 PANTHER PTHR10617 334 398 1.3E-119 T 22-04-2016 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 PANTHER PTHR10617 1 284 1.3E-119 T 22-04-2016 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 PANTHER PTHR10617:SF103 334 398 1.3E-119 T 22-04-2016 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 PANTHER PTHR10617:SF103 1 284 1.3E-119 T 22-04-2016 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 Pfam PF03486 HI0933-like protein 6 396 8.8E-145 T 22-04-2016 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 366 373 5.8E-9 T 22-04-2016 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.8E-9 T 22-04-2016 R615_RS05405 1632a2fd68fc9d844c2757203d989f5d 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 169 5.8E-9 T 22-04-2016 R615_RS16610 07751829eadfa0b869d66ec4e03c669c 139 Gene3D G3DSA:3.10.450.50 2 130 5.2E-25 T 22-04-2016 IPR032710 NTF2-like domain R615_RS16610 07751829eadfa0b869d66ec4e03c669c 139 Pfam PF07366 SnoaL-like polyketide cyclase 6 128 2.3E-19 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain R615_RS16610 07751829eadfa0b869d66ec4e03c669c 139 SUPERFAMILY SSF54427 1 130 3.71E-24 T 22-04-2016 IPR032710 NTF2-like domain R615_RS16610 07751829eadfa0b869d66ec4e03c669c 139 PANTHER PTHR38436 2 130 1.1E-12 T 22-04-2016 R615_RS05445 0b4553d183f378746f3e3dc9846b3aab 366 PANTHER PTHR34296 17 357 4.4E-138 T 22-04-2016 R615_RS05445 0b4553d183f378746f3e3dc9846b3aab 366 PANTHER PTHR34296:SF1 17 357 4.4E-138 T 22-04-2016 R615_RS05445 0b4553d183f378746f3e3dc9846b3aab 366 Gene3D G3DSA:3.40.50.2300 33 172 2.2E-47 T 22-04-2016 R615_RS05445 0b4553d183f378746f3e3dc9846b3aab 366 Pfam PF02608 Basic membrane protein 37 311 2.7E-49 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 R615_RS13080 ed0f228a02e6d2fc247e6d451bca9ecb 309 Pfam PF01551 Peptidase family M23 207 300 3.9E-32 T 22-04-2016 IPR016047 Peptidase M23 R615_RS13080 ed0f228a02e6d2fc247e6d451bca9ecb 309 PANTHER PTHR21666 42 304 8.6E-49 T 22-04-2016 R615_RS13080 ed0f228a02e6d2fc247e6d451bca9ecb 309 SUPERFAMILY SSF51261 173 304 5.75E-55 T 22-04-2016 IPR011055 Duplicated hybrid motif R615_RS13080 ed0f228a02e6d2fc247e6d451bca9ecb 309 Gene3D G3DSA:2.70.70.10 171 305 3.2E-47 T 22-04-2016 R615_RS13890 8b3552d63cd1beb37a3181f5a0494b18 119 SUPERFAMILY SSF69754 4 112 7.46E-18 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 R615_RS13890 8b3552d63cd1beb37a3181f5a0494b18 119 Gene3D G3DSA:3.30.160.100 4 107 2.7E-16 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 R615_RS13890 8b3552d63cd1beb37a3181f5a0494b18 119 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 105 3.2E-12 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 R615_RS02745 15a22ecbca80c053508b3d9719ad4647 221 Pfam PF04612 Type II secretion system (T2SS), protein M 12 106 1.7E-8 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 R615_RS17510 06212dd5affbe5e72b9ae9db6ee8612f 199 Gene3D G3DSA:1.10.10.60 1 66 3.6E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS17510 06212dd5affbe5e72b9ae9db6ee8612f 199 PANTHER PTHR30055:SF44 1 193 1.9E-34 T 22-04-2016 R615_RS17510 06212dd5affbe5e72b9ae9db6ee8612f 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 54 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site R615_RS17510 06212dd5affbe5e72b9ae9db6ee8612f 199 PANTHER PTHR30055 1 193 1.9E-34 T 22-04-2016 R615_RS17510 06212dd5affbe5e72b9ae9db6ee8612f 199 SUPERFAMILY SSF46689 2 74 1.03E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS17510 06212dd5affbe5e72b9ae9db6ee8612f 199 Gene3D G3DSA:1.10.357.10 72 192 3.8E-17 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS17510 06212dd5affbe5e72b9ae9db6ee8612f 199 SUPERFAMILY SSF48498 79 192 9.3E-18 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal R615_RS17510 06212dd5affbe5e72b9ae9db6ee8612f 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 1.8E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS09395 da46c8934f6d290057d2744c3bb12c85 180 PANTHER PTHR30446 1 157 4.1E-35 T 22-04-2016 R615_RS09395 da46c8934f6d290057d2744c3bb12c85 180 PANTHER PTHR30446:SF0 1 157 4.1E-35 T 22-04-2016 R615_RS09395 da46c8934f6d290057d2744c3bb12c85 180 SUPERFAMILY SSF111304 3 161 1.27E-31 T 22-04-2016 IPR023627 Recombination protein RecR R615_RS09395 da46c8934f6d290057d2744c3bb12c85 180 Pfam PF13662 Toprim domain 94 157 3.4E-6 T 22-04-2016 IPR006171 Toprim domain R615_RS09395 da46c8934f6d290057d2744c3bb12c85 180 Pfam PF02132 RecR protein 38 75 3.1E-9 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger R615_RS11720 278b344d4394017b4b3f6c9e4fe90635 526 Pfam PF00474 Sodium:solute symporter family 58 456 1.3E-69 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 R615_RS11720 278b344d4394017b4b3f6c9e4fe90635 526 PANTHER PTHR11819:SF13 26 525 3.6E-134 T 22-04-2016 R615_RS11720 278b344d4394017b4b3f6c9e4fe90635 526 PANTHER PTHR11819 26 525 3.6E-134 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 ProSitePatterns PS00321 recA signature. 213 221 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 PANTHER PTHR22942 5 335 5.0E-196 T 22-04-2016 R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 SUPERFAMILY SSF54752 269 324 2.62E-19 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 Hamap MF_00268 Protein RecA [recA]. 5 329 50.275 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 323 2.4E-167 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 PANTHER PTHR22942:SF1 5 335 5.0E-196 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 SUPERFAMILY SSF52540 4 267 3.04E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 Gene3D G3DSA:3.40.50.300 28 267 9.7E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 Gene3D G3DSA:3.30.250.10 270 326 6.0E-26 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 PRINTS PR00142 RecA protein signature 210 238 1.9E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 PRINTS PR00142 RecA protein signature 93 122 1.9E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 PRINTS PR00142 RecA protein signature 127 156 1.9E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 PRINTS PR00142 RecA protein signature 243 272 1.9E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 PRINTS PR00142 RecA protein signature 297 314 1.9E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 PRINTS PR00142 RecA protein signature 165 194 1.9E-83 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 SMART SM00382 57 228 1.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS14385 bc2b89ea781180589aeb9058b835cd69 345 Pfam PF00154 recA bacterial DNA recombination protein 7 267 7.4E-142 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 1.0E-17 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 SUPERFAMILY SSF52343 257 403 5.37E-37 T 22-04-2016 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 PIRSF PIRSF000044 1 407 9.7E-217 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 PANTHER PTHR19370:SF32 61 176 7.5E-135 T 22-04-2016 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 PANTHER PTHR19370 61 176 7.5E-135 T 22-04-2016 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 PANTHER PTHR19370 205 407 7.5E-135 T 22-04-2016 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 40 115 3.0E-11 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 PANTHER PTHR19370:SF32 205 407 7.5E-135 T 22-04-2016 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 Gene3D G3DSA:3.10.20.30 41 123 1.9E-22 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 Gene3D G3DSA:2.40.30.10 124 264 3.2E-58 T 22-04-2016 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 6.3E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 6.3E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 6.3E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 314 325 6.3E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 Pfam PF00970 Oxidoreductase FAD-binding domain 199 266 2.6E-10 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 5 407 1.4E-216 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 3 407 63.874 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 SUPERFAMILY SSF54292 38 124 3.82E-23 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 Gene3D G3DSA:3.40.50.80 269 406 2.8E-41 T 22-04-2016 R615_RS07135 d01142293712603b2acdaa2a97b78a05 407 SUPERFAMILY SSF63380 105 272 1.31E-36 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 R615_RS08940 e55bb97d46e33c07cbc42175d82985ac 299 PANTHER PTHR11562:SF17 7 290 7.7E-73 T 22-04-2016 R615_RS08940 e55bb97d46e33c07cbc42175d82985ac 299 SUPERFAMILY SSF161111 8 200 1.44E-45 T 22-04-2016 R615_RS08940 e55bb97d46e33c07cbc42175d82985ac 299 Gene3D G3DSA:1.20.1510.10 10 198 3.5E-44 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain R615_RS08940 e55bb97d46e33c07cbc42175d82985ac 299 Pfam PF01545 Cation efflux family 15 198 1.0E-38 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS08940 e55bb97d46e33c07cbc42175d82985ac 299 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 283 5.3E-57 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS08940 e55bb97d46e33c07cbc42175d82985ac 299 SUPERFAMILY SSF160240 206 281 1.16E-6 T 22-04-2016 R615_RS08940 e55bb97d46e33c07cbc42175d82985ac 299 PANTHER PTHR11562 7 290 7.7E-73 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 R615_RS17220 2e920e8374e75508b2f9c76c239c846d 1845 Pfam PF07581 The GLUG motif 593 620 3.7E-5 T 22-04-2016 IPR011493 GLUG R615_RS17220 2e920e8374e75508b2f9c76c239c846d 1845 Pfam PF07581 The GLUG motif 621 647 0.0022 T 22-04-2016 IPR011493 GLUG R615_RS17220 2e920e8374e75508b2f9c76c239c846d 1845 Gene3D G3DSA:4.10.1080.10 331 367 2.8E-19 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17220 2e920e8374e75508b2f9c76c239c846d 1845 Gene3D G3DSA:4.10.1080.10 1285 1320 2.4E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17220 2e920e8374e75508b2f9c76c239c846d 1845 Gene3D G3DSA:4.10.1080.10 423 458 2.8E-19 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17220 2e920e8374e75508b2f9c76c239c846d 1845 Gene3D G3DSA:4.10.1080.10 1373 1387 2.4E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17220 2e920e8374e75508b2f9c76c239c846d 1845 Gene3D G3DSA:4.10.1080.10 761 828 2.8E-19 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17220 2e920e8374e75508b2f9c76c239c846d 1845 Gene3D G3DSA:4.10.1080.10 1187 1227 2.4E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS05150 f74c16b2a49d5f1d5ee1981e7bb4a926 160 PANTHER PTHR22617 1 157 1.0E-99 T 22-04-2016 R615_RS05150 f74c16b2a49d5f1d5ee1981e7bb4a926 160 SUPERFAMILY SSF50341 12 154 6.67E-43 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS05150 f74c16b2a49d5f1d5ee1981e7bb4a926 160 PANTHER PTHR22617:SF26 1 157 1.0E-99 T 22-04-2016 R615_RS05150 f74c16b2a49d5f1d5ee1981e7bb4a926 160 Pfam PF01584 CheW-like domain 16 152 3.8E-40 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS05150 f74c16b2a49d5f1d5ee1981e7bb4a926 160 SMART SM00260 12 149 8.2E-52 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS05150 f74c16b2a49d5f1d5ee1981e7bb4a926 160 Gene3D G3DSA:2.40.50.180 43 89 1.8E-10 T 22-04-2016 R615_RS05150 f74c16b2a49d5f1d5ee1981e7bb4a926 160 Gene3D G3DSA:2.30.30.40 90 142 7.2E-10 T 22-04-2016 R615_RS16865 7b2a673c001588bc8064fb8aa7aadc05 359 Pfam PF06580 Histidine kinase 159 236 1.3E-22 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 R615_RS16865 7b2a673c001588bc8064fb8aa7aadc05 359 PANTHER PTHR34220 1 358 4.6E-51 T 22-04-2016 R615_RS06680 8ff7778031695bb4a38df921c0437208 224 PANTHER PTHR24220 3 223 1.8E-99 T 22-04-2016 R615_RS06680 8ff7778031695bb4a38df921c0437208 224 PANTHER PTHR24220:SF578 3 223 1.8E-99 T 22-04-2016 R615_RS06680 8ff7778031695bb4a38df921c0437208 224 SUPERFAMILY SSF52540 1 222 5.32E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06680 8ff7778031695bb4a38df921c0437208 224 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS06680 8ff7778031695bb4a38df921c0437208 224 SMART SM00382 30 217 3.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS06680 8ff7778031695bb4a38df921c0437208 224 Gene3D G3DSA:3.40.50.300 1 222 1.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06680 8ff7778031695bb4a38df921c0437208 224 Pfam PF00005 ABC transporter 21 169 4.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS09135 464454f52a0d70f6d53302cfe288366b 1038 SUPERFAMILY SSF50249 40 124 5.95E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS09135 464454f52a0d70f6d53302cfe288366b 1038 SMART SM00316 37 118 3.5E-13 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS09135 464454f52a0d70f6d53302cfe288366b 1038 PANTHER PTHR30001 1 824 0.0 T 22-04-2016 R615_RS09135 464454f52a0d70f6d53302cfe288366b 1038 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 2.5E-165 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 R615_RS09135 464454f52a0d70f6d53302cfe288366b 1038 PANTHER PTHR30001:SF1 1 824 0.0 T 22-04-2016 R615_RS09135 464454f52a0d70f6d53302cfe288366b 1038 Hamap MF_00970 Ribonuclease E [rne]. 1 987 33.483 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 R615_RS09135 464454f52a0d70f6d53302cfe288366b 1038 Pfam PF10150 Ribonuclease E/G family 120 389 3.7E-96 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 R615_RS09135 464454f52a0d70f6d53302cfe288366b 1038 Gene3D G3DSA:2.40.50.140 31 124 5.0E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS09135 464454f52a0d70f6d53302cfe288366b 1038 Pfam PF00575 S1 RNA binding domain 36 117 3.5E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 PANTHER PTHR30408 531 584 1.2E-172 T 22-04-2016 R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 PANTHER PTHR30408 1 487 1.2E-172 T 22-04-2016 R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 228 244 2.3E-19 T 22-04-2016 R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 359 383 2.3E-19 T 22-04-2016 R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 251 265 2.3E-19 T 22-04-2016 R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 325 337 2.3E-19 T 22-04-2016 R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 SUPERFAMILY SSF53335 520 604 3.22E-138 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 SUPERFAMILY SSF53335 12 50 3.22E-138 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 SUPERFAMILY SSF53335 105 488 3.22E-138 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 Gene3D G3DSA:3.40.50.150 230 467 1.7E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 Pfam PF02384 N-6 DNA Methylase 204 565 2.8E-113 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 PANTHER PTHR30408:SF8 531 584 1.2E-172 T 22-04-2016 R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 PANTHER PTHR30408:SF8 1 487 1.2E-172 T 22-04-2016 R615_RS06330 33dfc421ecaca457beffe86b8c1fc4fb 605 Pfam PF12161 HsdM N-terminal domain 13 192 3.2E-23 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain R615_RS12125 7278b1865b15d70f63627a33d006cfea 218 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 83 151 1.2E-14 T 22-04-2016 R615_RS12125 7278b1865b15d70f63627a33d006cfea 218 Gene3D G3DSA:3.40.50.150 41 164 5.4E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12125 7278b1865b15d70f63627a33d006cfea 218 PANTHER PTHR18895 60 178 7.0E-22 T 22-04-2016 R615_RS12125 7278b1865b15d70f63627a33d006cfea 218 SUPERFAMILY SSF53335 61 175 5.58E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12125 7278b1865b15d70f63627a33d006cfea 218 PANTHER PTHR18895:SF3 60 178 7.0E-22 T 22-04-2016 R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 SUPERFAMILY SSF82679 3 113 5.23E-41 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 Gene3D G3DSA:3.30.70.940 3 114 3.8E-46 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 Pfam PF00467 KOW motif 126 156 1.1E-8 T 22-04-2016 IPR005824 KOW R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 SMART SM00738 2 111 4.8E-51 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 SMART SM00739 123 150 1.7E-5 T 22-04-2016 IPR005824 KOW R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 PANTHER PTHR30265 1 176 5.5E-78 T 22-04-2016 R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 23.744 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 Pfam PF02357 Transcription termination factor nusG 3 108 1.3E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 6.7E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 6.7E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 6.7E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 SUPERFAMILY SSF50104 121 176 2.21E-18 T 22-04-2016 IPR008991 Translation protein SH3-like domain R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 2.3E-70 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 R615_RS15935 396d12b3055836cdfc7965ca00f52a41 178 Gene3D G3DSA:2.30.30.30 116 176 8.2E-28 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 R615_RS04395 00f9aa4a628cb3bc85dd87046d8c2935 177 PANTHER PTHR33692 7 177 9.0E-46 T 22-04-2016 R615_RS04395 00f9aa4a628cb3bc85dd87046d8c2935 177 SUPERFAMILY SSF50447 10 96 3.07E-21 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain R615_RS04395 00f9aa4a628cb3bc85dd87046d8c2935 177 SUPERFAMILY SSF50346 102 177 2.35E-18 T 22-04-2016 IPR011033 PRC-barrel-like R615_RS04395 00f9aa4a628cb3bc85dd87046d8c2935 177 Gene3D G3DSA:2.30.30.240 103 177 3.9E-26 T 22-04-2016 R615_RS04395 00f9aa4a628cb3bc85dd87046d8c2935 177 Pfam PF01782 RimM N-terminal domain 12 92 3.0E-23 T 22-04-2016 IPR002676 RimM protein GO:0006364 R615_RS04395 00f9aa4a628cb3bc85dd87046d8c2935 177 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 11 176 1.8E-46 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 R615_RS04395 00f9aa4a628cb3bc85dd87046d8c2935 177 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 9 177 22.263 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 R615_RS04395 00f9aa4a628cb3bc85dd87046d8c2935 177 Gene3D G3DSA:2.40.30.60 6 96 2.8E-29 T 22-04-2016 IPR002676 RimM protein GO:0006364 R615_RS04395 00f9aa4a628cb3bc85dd87046d8c2935 177 Pfam PF05239 PRC-barrel domain 99 172 5.3E-6 T 22-04-2016 IPR027275 PRC-barrel domain R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 PANTHER PTHR11935:SF93 98 239 2.2E-153 T 22-04-2016 R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 PANTHER PTHR11935:SF93 263 497 2.2E-153 T 22-04-2016 R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 Pfam PF00753 Metallo-beta-lactamase superfamily 142 372 2.9E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 SUPERFAMILY SSF55718 560 680 7.3E-27 T 22-04-2016 IPR003033 SCP2 sterol-binding domain R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 Gene3D G3DSA:3.60.15.10 278 396 3.2E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 Gene3D G3DSA:3.60.15.10 113 241 3.2E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 Pfam PF14864 Alkyl sulfatase C-terminal 558 680 8.4E-31 T 22-04-2016 IPR029229 Alkyl sulfatase, C-terminal R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 SUPERFAMILY SSF56281 47 549 4.9E-144 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 Gene3D G3DSA:3.30.1050.10 566 672 2.8E-4 T 22-04-2016 IPR003033 SCP2 sterol-binding domain R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 Pfam PF14863 Alkyl sulfatase dimerisation 409 547 6.2E-58 T 22-04-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 SMART SM00849 146 373 3.3E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 PANTHER PTHR11935 98 239 2.2E-153 T 22-04-2016 R615_RS16755 aeb47e728286ffd6e29df403cd2c82b5 681 PANTHER PTHR11935 263 497 2.2E-153 T 22-04-2016 R615_RS16135 0c8af052ffa4096134763ef34102c1b1 164 Pfam PF13673 Acetyltransferase (GNAT) domain 41 152 5.1E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS16135 0c8af052ffa4096134763ef34102c1b1 164 PANTHER PTHR23091:SF220 9 160 3.9E-27 T 22-04-2016 R615_RS16135 0c8af052ffa4096134763ef34102c1b1 164 SUPERFAMILY SSF55729 8 156 5.15E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS16135 0c8af052ffa4096134763ef34102c1b1 164 PANTHER PTHR23091 9 160 3.9E-27 T 22-04-2016 R615_RS16135 0c8af052ffa4096134763ef34102c1b1 164 Gene3D G3DSA:3.40.630.30 9 159 4.2E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS17045 21ea7d381d9fe95f2f38e95762e29db9 311 PANTHER PTHR23293 254 311 4.0E-82 T 22-04-2016 R615_RS17045 21ea7d381d9fe95f2f38e95762e29db9 311 PANTHER PTHR23293 181 214 4.0E-82 T 22-04-2016 R615_RS17045 21ea7d381d9fe95f2f38e95762e29db9 311 PANTHER PTHR23293 1 161 4.0E-82 T 22-04-2016 R615_RS17045 21ea7d381d9fe95f2f38e95762e29db9 311 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 12 311 3.0E-140 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 R615_RS17045 21ea7d381d9fe95f2f38e95762e29db9 311 PANTHER PTHR23293:SF6 254 311 4.0E-82 T 22-04-2016 R615_RS17045 21ea7d381d9fe95f2f38e95762e29db9 311 PANTHER PTHR23293:SF6 181 214 4.0E-82 T 22-04-2016 R615_RS17045 21ea7d381d9fe95f2f38e95762e29db9 311 PANTHER PTHR23293:SF6 1 161 4.0E-82 T 22-04-2016 R615_RS17045 21ea7d381d9fe95f2f38e95762e29db9 311 SUPERFAMILY SSF52402 6 213 2.71E-70 T 22-04-2016 R615_RS17045 21ea7d381d9fe95f2f38e95762e29db9 311 Gene3D G3DSA:3.40.50.620 253 262 1.8E-57 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS17045 21ea7d381d9fe95f2f38e95762e29db9 311 Gene3D G3DSA:3.40.50.620 5 213 1.8E-57 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS17045 21ea7d381d9fe95f2f38e95762e29db9 311 PIRSF PIRSF002936 3 311 1.1E-136 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 R615_RS17045 21ea7d381d9fe95f2f38e95762e29db9 311 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 33 266 2.1E-55 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 R615_RS17080 89fea8e24b5d637c6b649717d5b0e8fe 636 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 376 399 - T 22-04-2016 IPR020595 MnmG-related, conserved site R615_RS17080 89fea8e24b5d637c6b649717d5b0e8fe 636 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 11 628 1.1E-277 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 R615_RS17080 89fea8e24b5d637c6b649717d5b0e8fe 636 Gene3D G3DSA:3.50.50.60 11 240 3.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS17080 89fea8e24b5d637c6b649717d5b0e8fe 636 SUPERFAMILY SSF51905 101 269 3.92E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS17080 89fea8e24b5d637c6b649717d5b0e8fe 636 SUPERFAMILY SSF51905 11 70 3.92E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS17080 89fea8e24b5d637c6b649717d5b0e8fe 636 Pfam PF01134 Glucose inhibited division protein A 12 406 1.6E-164 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 R615_RS17080 89fea8e24b5d637c6b649717d5b0e8fe 636 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 281 295 - T 22-04-2016 IPR020595 MnmG-related, conserved site R615_RS17080 89fea8e24b5d637c6b649717d5b0e8fe 636 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 9 630 42.114 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 R615_RS17080 89fea8e24b5d637c6b649717d5b0e8fe 636 PANTHER PTHR11806:SF0 2 633 0.0 T 22-04-2016 R615_RS17080 89fea8e24b5d637c6b649717d5b0e8fe 636 Pfam PF13932 GidA associated domain 409 621 8.9E-71 T 22-04-2016 IPR026904 GidA associated domain 3 R615_RS17080 89fea8e24b5d637c6b649717d5b0e8fe 636 SMART SM01228 552 623 1.6E-39 T 22-04-2016 R615_RS17080 89fea8e24b5d637c6b649717d5b0e8fe 636 PANTHER PTHR11806 2 633 0.0 T 22-04-2016 R615_RS10500 979b7ba07c2c55326a5a85dfcf87c806 88 Pfam PF03692 Putative zinc- or iron-chelating domain 7 65 1.2E-6 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein R615_RS10500 979b7ba07c2c55326a5a85dfcf87c806 88 PANTHER PTHR36931 1 87 1.1E-35 T 22-04-2016 R615_RS02115 616e6fafa0b3aa137714f1564e7a4992 260 PANTHER PTHR30188 1 260 5.4E-110 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 R615_RS02115 616e6fafa0b3aa137714f1564e7a4992 260 PANTHER PTHR30188:SF4 1 260 5.4E-110 T 22-04-2016 R615_RS02115 616e6fafa0b3aa137714f1564e7a4992 260 Pfam PF02405 Permease MlaE 44 254 2.8E-77 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 R615_RS02115 616e6fafa0b3aa137714f1564e7a4992 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 1.2E-86 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria R615_RS01075 7ce50ce24dc29c753834ce8d2d6b1287 286 PANTHER PTHR33525:SF3 30 235 1.1E-17 T 22-04-2016 R615_RS01075 7ce50ce24dc29c753834ce8d2d6b1287 286 PANTHER PTHR33525 30 235 1.1E-17 T 22-04-2016 R615_RS01075 7ce50ce24dc29c753834ce8d2d6b1287 286 Gene3D G3DSA:1.10.3150.10 19 249 3.4E-41 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS01075 7ce50ce24dc29c753834ce8d2d6b1287 286 SUPERFAMILY SSF109604 16 246 3.45E-36 T 22-04-2016 R615_RS01075 7ce50ce24dc29c753834ce8d2d6b1287 286 Pfam PF08668 HDOD domain 29 217 4.4E-29 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD R615_RS09635 36d7cc4bdc589958bbf976a52ffbe169 213 SUPERFAMILY SSF51366 4 203 5.34E-58 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 R615_RS09635 36d7cc4bdc589958bbf976a52ffbe169 213 PANTHER PTHR22854:SF6 3 210 1.5E-66 T 22-04-2016 R615_RS09635 36d7cc4bdc589958bbf976a52ffbe169 213 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 206 40.923 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 R615_RS09635 36d7cc4bdc589958bbf976a52ffbe169 213 PANTHER PTHR22854 3 210 1.5E-66 T 22-04-2016 R615_RS09635 36d7cc4bdc589958bbf976a52ffbe169 213 Gene3D G3DSA:3.20.20.70 3 203 4.0E-70 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS09635 36d7cc4bdc589958bbf976a52ffbe169 213 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 6 201 3.6E-49 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 R615_RS14105 f91c2334f94ad9645726fb4ea736659a 344 Gene3D G3DSA:3.90.1200.10 112 334 1.0E-63 T 22-04-2016 R615_RS14105 f91c2334f94ad9645726fb4ea736659a 344 SUPERFAMILY SSF56112 11 317 2.87E-49 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS14105 f91c2334f94ad9645726fb4ea736659a 344 Gene3D G3DSA:3.30.200.20 1 96 8.8E-25 T 22-04-2016 R615_RS14105 f91c2334f94ad9645726fb4ea736659a 344 Pfam PF01636 Phosphotransferase enzyme family 28 251 4.5E-24 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase R615_RS01850 26e7963a6dac502f3b5cda7be624eef6 131 ProSitePatterns PS00360 Ribosomal protein S9 signature. 70 88 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 R615_RS01850 26e7963a6dac502f3b5cda7be624eef6 131 Gene3D G3DSA:3.30.230.10 6 131 3.0E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS01850 26e7963a6dac502f3b5cda7be624eef6 131 SUPERFAMILY SSF54211 6 131 4.55E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS01850 26e7963a6dac502f3b5cda7be624eef6 131 PANTHER PTHR21569 1 131 8.2E-72 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 R615_RS01850 26e7963a6dac502f3b5cda7be624eef6 131 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 131 33.56 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid R615_RS01850 26e7963a6dac502f3b5cda7be624eef6 131 Pfam PF00380 Ribosomal protein S9/S16 11 131 4.2E-48 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 R615_RS07270 33ce38c577f251cfba730ab133c42cc1 1798 Pfam PF13699 Domain of unknown function (DUF4157) 205 282 9.8E-31 T 22-04-2016 IPR025295 Domain of unknown function DUF4157 R615_RS07270 33ce38c577f251cfba730ab133c42cc1 1798 Gene3D G3DSA:1.25.10.10 1196 1374 1.5E-4 T 22-04-2016 IPR011989 Armadillo-like helical R615_RS07270 33ce38c577f251cfba730ab133c42cc1 1798 Gene3D G3DSA:1.25.10.10 927 1163 1.5E-4 T 22-04-2016 IPR011989 Armadillo-like helical R615_RS11170 0e6588601e150a32c0bd31c0702cdc60 1047 Gene3D G3DSA:1.10.3820.10 488 501 7.8E-9 T 22-04-2016 R615_RS11170 0e6588601e150a32c0bd31c0702cdc60 1047 Gene3D G3DSA:1.10.3820.10 393 414 7.8E-9 T 22-04-2016 R615_RS11170 0e6588601e150a32c0bd31c0702cdc60 1047 Gene3D G3DSA:1.10.3820.10 541 556 7.8E-9 T 22-04-2016 R615_RS11170 0e6588601e150a32c0bd31c0702cdc60 1047 Gene3D G3DSA:1.10.3820.10 621 696 7.8E-9 T 22-04-2016 R615_RS11170 0e6588601e150a32c0bd31c0702cdc60 1047 Gene3D G3DSA:3.90.10.10 223 241 1.7E-4 T 22-04-2016 R615_RS11170 0e6588601e150a32c0bd31c0702cdc60 1047 Gene3D G3DSA:3.90.10.10 465 487 1.7E-4 T 22-04-2016 R615_RS11170 0e6588601e150a32c0bd31c0702cdc60 1047 Gene3D G3DSA:3.90.10.10 381 392 1.7E-4 T 22-04-2016 R615_RS11170 0e6588601e150a32c0bd31c0702cdc60 1047 SUPERFAMILY SSF48695 380 410 1.17E-18 T 22-04-2016 IPR011031 Multihaem cytochrome R615_RS11170 0e6588601e150a32c0bd31c0702cdc60 1047 SUPERFAMILY SSF48695 457 550 1.17E-18 T 22-04-2016 IPR011031 Multihaem cytochrome R615_RS11170 0e6588601e150a32c0bd31c0702cdc60 1047 SUPERFAMILY SSF48695 622 712 1.17E-18 T 22-04-2016 IPR011031 Multihaem cytochrome R615_RS08890 64c34e4a19c60c89623530ccf92a5790 119 Pfam PF02411 MerT mercuric transport protein 8 119 3.5E-51 T 22-04-2016 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 R615_RS08230 286b46dde7bdc98242efc403ce7afa99 546 Gene3D G3DSA:1.20.120.160 22 138 2.9E-4 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS08230 286b46dde7bdc98242efc403ce7afa99 546 SUPERFAMILY SSF47226 17 134 1.51E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 R615_RS02065 30e8649094f631e96f72e9f24bb6774e 291 SUPERFAMILY SSF52540 1 152 1.08E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02065 30e8649094f631e96f72e9f24bb6774e 291 PIRSF PIRSF005052 1 287 3.6E-110 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 R615_RS02065 30e8649094f631e96f72e9f24bb6774e 291 Pfam PF03668 P-loop ATPase protein family 1 284 4.1E-103 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 R615_RS02065 30e8649094f631e96f72e9f24bb6774e 291 Gene3D G3DSA:3.40.50.300 1 153 5.4E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02065 30e8649094f631e96f72e9f24bb6774e 291 PANTHER PTHR30448:SF0 1 290 3.2E-127 T 22-04-2016 R615_RS02065 30e8649094f631e96f72e9f24bb6774e 291 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 284 40.068 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 R615_RS02065 30e8649094f631e96f72e9f24bb6774e 291 PANTHER PTHR30448 1 290 3.2E-127 T 22-04-2016 R615_RS01230 83525506cd265a3cbf7f39d10f7769a4 175 PANTHER PTHR22617 24 164 2.4E-25 T 22-04-2016 R615_RS01230 83525506cd265a3cbf7f39d10f7769a4 175 SUPERFAMILY SSF50341 29 172 1.57E-32 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS01230 83525506cd265a3cbf7f39d10f7769a4 175 SMART SM00260 29 165 1.7E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS01230 83525506cd265a3cbf7f39d10f7769a4 175 Gene3D G3DSA:2.40.50.180 72 117 3.7E-7 T 22-04-2016 R615_RS01230 83525506cd265a3cbf7f39d10f7769a4 175 Pfam PF01584 CheW-like domain 35 167 9.3E-29 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS17170 75259299b1d344413d008de9e750a875 510 Pfam PF07693 KAP family P-loop domain 25 284 2.4E-37 T 22-04-2016 IPR011646 KAP family P-loop domain R615_RS17170 75259299b1d344413d008de9e750a875 510 Gene3D G3DSA:3.40.50.300 53 246 6.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17170 75259299b1d344413d008de9e750a875 510 SUPERFAMILY SSF52540 167 278 9.98E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17170 75259299b1d344413d008de9e750a875 510 SUPERFAMILY SSF52540 45 92 9.98E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03815 dbee92e7d1945c6e2a6d011c829b9908 132 Pfam PF04355 SmpA / OmlA family 31 98 3.1E-21 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 R615_RS03815 dbee92e7d1945c6e2a6d011c829b9908 132 PANTHER PTHR37482 1 120 5.4E-24 T 22-04-2016 R615_RS03815 dbee92e7d1945c6e2a6d011c829b9908 132 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 2 123 26.829 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE R615_RS03815 dbee92e7d1945c6e2a6d011c829b9908 132 PANTHER PTHR37482:SF1 1 120 5.4E-24 T 22-04-2016 R615_RS08505 2d9ab2abd81aba255f3f8f5e39531da6 321 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 68 3.8E-9 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain R615_RS08505 2d9ab2abd81aba255f3f8f5e39531da6 321 Gene3D G3DSA:3.40.1030.10 81 314 1.7E-21 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 R615_RS08505 2d9ab2abd81aba255f3f8f5e39531da6 321 SUPERFAMILY SSF52418 79 317 2.2E-32 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 R615_RS08505 2d9ab2abd81aba255f3f8f5e39531da6 321 SUPERFAMILY SSF47648 15 69 1.57E-10 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain R615_RS08505 2d9ab2abd81aba255f3f8f5e39531da6 321 Gene3D G3DSA:1.20.970.10 15 68 4.1E-12 T 22-04-2016 R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 SMART SM00267 436 607 8.3E-53 T 22-04-2016 IPR000160 GGDEF domain R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 Pfam PF00990 Diguanylate cyclase, GGDEF domain 447 599 2.4E-40 T 22-04-2016 IPR000160 GGDEF domain R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 Gene3D G3DSA:3.20.20.450 620 867 1.8E-84 T 22-04-2016 IPR001633 EAL domain R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 SUPERFAMILY SSF141868 623 867 8.24E-80 T 22-04-2016 IPR001633 EAL domain R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 SUPERFAMILY SSF55073 452 601 9.42E-42 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 PANTHER PTHR33121:SF13 10 19 5.4E-64 T 22-04-2016 R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 PANTHER PTHR33121:SF13 570 869 5.4E-64 T 22-04-2016 R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 SMART SM00052 617 859 2.5E-99 T 22-04-2016 IPR001633 EAL domain R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 Pfam PF00563 EAL domain 623 854 3.4E-66 T 22-04-2016 IPR001633 EAL domain R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 PANTHER PTHR33121 10 19 5.4E-64 T 22-04-2016 R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 PANTHER PTHR33121 570 869 5.4E-64 T 22-04-2016 R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 Gene3D G3DSA:3.30.70.270 448 610 7.7E-47 T 22-04-2016 R615_RS17660 0db800be856b8dfb37bdfe5e94a70480 884 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 443 600 1.1E-36 T 22-04-2016 IPR000160 GGDEF domain R615_RS06715 692877f9659d090eb5a21c6776ca5fed 164 SMART SM01001 3 154 3.5E-104 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 R615_RS06715 692877f9659d090eb5a21c6776ca5fed 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 158 3.6E-66 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 R615_RS06715 692877f9659d090eb5a21c6776ca5fed 164 Pfam PF00731 AIR carboxylase 5 152 1.5E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 R615_RS06715 692877f9659d090eb5a21c6776ca5fed 164 Gene3D G3DSA:3.40.50.7700 2 158 3.1E-74 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 R615_RS06715 692877f9659d090eb5a21c6776ca5fed 164 PIRSF PIRSF001338 1 163 1.6E-67 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 R615_RS06715 692877f9659d090eb5a21c6776ca5fed 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 32.472 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 R615_RS06715 692877f9659d090eb5a21c6776ca5fed 164 PANTHER PTHR23046:SF2 1 163 2.8E-86 T 22-04-2016 R615_RS06715 692877f9659d090eb5a21c6776ca5fed 164 SUPERFAMILY SSF52255 4 160 2.88E-66 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 R615_RS06715 692877f9659d090eb5a21c6776ca5fed 164 PANTHER PTHR23046 1 163 2.8E-86 T 22-04-2016 R615_RS02320 6f975db9c9adc8afd05130c81c7f1094 472 Gene3D G3DSA:3.30.70.1230 269 448 4.0E-20 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 R615_RS02320 6f975db9c9adc8afd05130c81c7f1094 472 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 269 448 4.8E-13 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 R615_RS02320 6f975db9c9adc8afd05130c81c7f1094 472 SUPERFAMILY SSF55073 267 447 4.4E-27 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS01550 3eedf85c348397a2159da7dd72fa7777 719 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 509 565 7.8E-5 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 R615_RS01550 3eedf85c348397a2159da7dd72fa7777 719 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 338 446 1.3E-8 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 R615_RS01550 3eedf85c348397a2159da7dd72fa7777 719 Gene3D G3DSA:3.20.20.140 512 628 2.0E-39 T 22-04-2016 R615_RS01550 3eedf85c348397a2159da7dd72fa7777 719 Gene3D G3DSA:3.20.20.140 271 450 2.0E-39 T 22-04-2016 R615_RS01550 3eedf85c348397a2159da7dd72fa7777 719 SUPERFAMILY SSF51556 501 652 2.82E-31 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS01550 3eedf85c348397a2159da7dd72fa7777 719 SUPERFAMILY SSF51556 277 444 2.82E-31 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS16430 4221cde3e1f5b7bb5cb0c874f0824750 610 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 52 603 5.1E-241 T 22-04-2016 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 R615_RS16430 4221cde3e1f5b7bb5cb0c874f0824750 610 PANTHER PTHR11895:SF24 17 463 1.1E-162 T 22-04-2016 R615_RS16430 4221cde3e1f5b7bb5cb0c874f0824750 610 Gene3D G3DSA:3.90.1300.10 16 462 1.1E-106 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS16430 4221cde3e1f5b7bb5cb0c874f0824750 610 Pfam PF01425 Amidase 61 443 3.6E-85 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS16430 4221cde3e1f5b7bb5cb0c874f0824750 610 SUPERFAMILY SSF75304 18 456 1.44E-106 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS16430 4221cde3e1f5b7bb5cb0c874f0824750 610 PANTHER PTHR11895 17 463 1.1E-162 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS13850 b957d2962279c87e762d69e01efd6863 140 PANTHER PTHR34352 1 140 5.0E-51 T 22-04-2016 R615_RS13850 b957d2962279c87e762d69e01efd6863 140 Gene3D G3DSA:3.30.300.20 39 136 8.4E-41 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta R615_RS13850 b957d2962279c87e762d69e01efd6863 140 Pfam PF02566 OsmC-like protein 34 132 4.9E-18 T 22-04-2016 IPR003718 OsmC/Ohr family R615_RS13850 b957d2962279c87e762d69e01efd6863 140 Gene3D G3DSA:2.20.25.10 1 34 1.1E-18 T 22-04-2016 R615_RS13850 b957d2962279c87e762d69e01efd6863 140 SUPERFAMILY SSF82784 1 135 2.36E-39 T 22-04-2016 IPR003718 OsmC/Ohr family R615_RS01020 31f6d1e5ad29d482d1678fdd70a776c2 293 PANTHER PTHR13929:SF0 1 293 6.6E-20 T 22-04-2016 R615_RS01020 31f6d1e5ad29d482d1678fdd70a776c2 293 Pfam PF01040 UbiA prenyltransferase family 20 264 1.2E-24 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 R615_RS01020 31f6d1e5ad29d482d1678fdd70a776c2 293 PANTHER PTHR13929 1 293 6.6E-20 T 22-04-2016 R615_RS05960 c0ef6a8d124ff874233182bf6788b011 130 Pfam PF09361 Phasin protein 8 107 9.3E-18 T 22-04-2016 IPR018968 Phasin R615_RS05960 c0ef6a8d124ff874233182bf6788b011 130 TIGRFAM TIGR02809 phasin_3: phasin family protein 5 106 5.2E-30 T 22-04-2016 IPR014176 Phasin, subfamily 3 R615_RS03040 14d2dcb96a4bc2f9c0906bfd31bfb3fc 323 Pfam PF13406 Transglycosylase SLT domain 30 320 3.3E-98 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 R615_RS03040 14d2dcb96a4bc2f9c0906bfd31bfb3fc 323 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 34 321 9.7E-109 T 22-04-2016 IPR011757 Lytic transglycosylase MltB R615_RS03040 14d2dcb96a4bc2f9c0906bfd31bfb3fc 323 PANTHER PTHR30163 26 321 2.2E-119 T 22-04-2016 IPR011757 Lytic transglycosylase MltB R615_RS03040 14d2dcb96a4bc2f9c0906bfd31bfb3fc 323 SUPERFAMILY SSF53955 15 322 1.03E-82 T 22-04-2016 IPR023346 Lysozyme-like domain R615_RS03040 14d2dcb96a4bc2f9c0906bfd31bfb3fc 323 Gene3D G3DSA:1.10.530.10 73 129 1.4E-55 T 22-04-2016 R615_RS03040 14d2dcb96a4bc2f9c0906bfd31bfb3fc 323 Gene3D G3DSA:1.10.530.10 210 322 1.4E-55 T 22-04-2016 R615_RS03040 14d2dcb96a4bc2f9c0906bfd31bfb3fc 323 PANTHER PTHR30163:SF0 26 321 2.2E-119 T 22-04-2016 R615_RS03670 d69a0e192405e6cf8d1c4b3ee79fa1d1 275 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 45 263 6.5E-63 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 R615_RS03670 d69a0e192405e6cf8d1c4b3ee79fa1d1 275 PANTHER PTHR30632:SF0 1 267 2.5E-35 T 22-04-2016 R615_RS03670 d69a0e192405e6cf8d1c4b3ee79fa1d1 275 Gene3D G3DSA:3.40.190.10 40 143 1.4E-38 T 22-04-2016 R615_RS03670 d69a0e192405e6cf8d1c4b3ee79fa1d1 275 PIRSF PIRSF004846 4 268 7.3E-52 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 R615_RS03670 d69a0e192405e6cf8d1c4b3ee79fa1d1 275 Pfam PF13531 Bacterial extracellular solute-binding protein 40 264 1.1E-41 T 22-04-2016 R615_RS03670 d69a0e192405e6cf8d1c4b3ee79fa1d1 275 SUPERFAMILY SSF53850 39 264 1.27E-55 T 22-04-2016 R615_RS03670 d69a0e192405e6cf8d1c4b3ee79fa1d1 275 PANTHER PTHR30632 1 267 2.5E-35 T 22-04-2016 R615_RS03670 d69a0e192405e6cf8d1c4b3ee79fa1d1 275 Gene3D G3DSA:3.40.190.10 144 226 1.2E-18 T 22-04-2016 R615_RS16605 8254e52754878fe51105d89414ca2e04 151 SUPERFAMILY SSF88697 1 149 1.63E-56 T 22-04-2016 IPR015947 PUA-like domain R615_RS16605 8254e52754878fe51105d89414ca2e04 151 Gene3D G3DSA:3.10.590.10 1 151 1.7E-28 T 22-04-2016 IPR002740 EVE domain R615_RS16605 8254e52754878fe51105d89414ca2e04 151 PANTHER PTHR14087 1 149 1.2E-69 T 22-04-2016 R615_RS16605 8254e52754878fe51105d89414ca2e04 151 Pfam PF01878 EVE domain 2 149 5.7E-50 T 22-04-2016 IPR002740 EVE domain R615_RS12835 0ed43bc83850cd64b2e34d920a5fd89c 153 SUPERFAMILY SSF102712 79 121 2.48E-5 T 22-04-2016 R615_RS12835 0ed43bc83850cd64b2e34d920a5fd89c 153 TIGRFAM TIGR00608 radc: DNA repair protein RadC 12 153 3.1E-48 T 22-04-2016 IPR001405 RadC protein R615_RS12835 0ed43bc83850cd64b2e34d920a5fd89c 153 Pfam PF04002 RadC-like JAB domain 32 151 8.2E-45 T 22-04-2016 IPR025657 RadC-like JAB domain R615_RS12835 0ed43bc83850cd64b2e34d920a5fd89c 153 PANTHER PTHR30471 14 153 4.2E-76 T 22-04-2016 R615_RS12835 0ed43bc83850cd64b2e34d920a5fd89c 153 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 102 107 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site R615_RS12835 0ed43bc83850cd64b2e34d920a5fd89c 153 PANTHER PTHR30471:SF5 14 153 4.2E-76 T 22-04-2016 R615_RS12835 0ed43bc83850cd64b2e34d920a5fd89c 153 Gene3D G3DSA:3.40.140.10 30 153 4.2E-49 T 22-04-2016 R615_RS15165 65020e831ae7e3ad0ca0bd261302bfb5 318 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 21 261 9.3E-75 T 22-04-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC R615_RS15165 65020e831ae7e3ad0ca0bd261302bfb5 318 PANTHER PTHR30388 3 300 3.7E-62 T 22-04-2016 R615_RS15165 65020e831ae7e3ad0ca0bd261302bfb5 318 Gene3D G3DSA:3.40.50.720 107 214 2.8E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS15165 65020e831ae7e3ad0ca0bd261302bfb5 318 Pfam PF13478 XdhC Rossmann domain 108 260 1.5E-35 T 22-04-2016 IPR027051 XdhC Rossmann domain R615_RS15165 65020e831ae7e3ad0ca0bd261302bfb5 318 PANTHER PTHR30388:SF5 3 300 3.7E-62 T 22-04-2016 R615_RS15165 65020e831ae7e3ad0ca0bd261302bfb5 318 Pfam PF02625 XdhC and CoxI family 17 73 3.0E-13 T 22-04-2016 IPR003777 XdhC- CoxI R615_RS15035 4bafd439bf1098caedaf6aca6ec9241c 333 PANTHER PTHR19372 59 328 1.0E-139 T 22-04-2016 R615_RS15035 4bafd439bf1098caedaf6aca6ec9241c 333 Gene3D G3DSA:3.90.420.10 79 330 1.4E-69 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 R615_RS15035 4bafd439bf1098caedaf6aca6ec9241c 333 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 7 333 59.082 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 R615_RS15035 4bafd439bf1098caedaf6aca6ec9241c 333 Pfam PF00174 Oxidoreductase molybdopterin binding domain 110 267 1.9E-26 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 R615_RS15035 4bafd439bf1098caedaf6aca6ec9241c 333 SUPERFAMILY SSF56524 77 329 6.41E-90 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 R615_RS15035 4bafd439bf1098caedaf6aca6ec9241c 333 PANTHER PTHR19372:SF1 59 328 1.0E-139 T 22-04-2016 R615_RS11210 4f0f285ec823bef0cc00b3096bbe90de 74 Pfam PF11197 Protein of unknown function (DUF2835) 5 72 4.2E-26 T 22-04-2016 IPR021363 Protein of unknown function DUF2835 R615_RS05770 3c173493715e3ca11ae77198df221c29 175 PANTHER PTHR13696 17 170 1.7E-35 T 22-04-2016 R615_RS05770 3c173493715e3ca11ae77198df221c29 175 Pfam PF01883 Domain of unknown function DUF59 79 151 9.9E-19 T 22-04-2016 IPR002744 Domain of unknown function DUF59 R615_RS05770 3c173493715e3ca11ae77198df221c29 175 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 7 173 1.3E-69 T 22-04-2016 IPR017776 FeS assembly SUF system protein SufT, putative R615_RS05770 3c173493715e3ca11ae77198df221c29 175 PANTHER PTHR13696:SF62 17 170 1.7E-35 T 22-04-2016 R615_RS05770 3c173493715e3ca11ae77198df221c29 175 SUPERFAMILY SSF117916 77 171 3.14E-30 T 22-04-2016 R615_RS15575 540019afc043a2dd5ad9aeb08d09cbdb 435 Pfam PF07690 Major Facilitator Superfamily 218 404 1.2E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 R615_RS15575 540019afc043a2dd5ad9aeb08d09cbdb 435 Gene3D G3DSA:1.20.1250.20 6 186 3.9E-13 T 22-04-2016 R615_RS15575 540019afc043a2dd5ad9aeb08d09cbdb 435 Gene3D G3DSA:1.20.1250.20 213 393 5.6E-20 T 22-04-2016 R615_RS15575 540019afc043a2dd5ad9aeb08d09cbdb 435 PANTHER PTHR23513 1 418 1.2E-36 T 22-04-2016 R615_RS15575 540019afc043a2dd5ad9aeb08d09cbdb 435 PANTHER PTHR23513:SF4 1 418 1.2E-36 T 22-04-2016 R615_RS15575 540019afc043a2dd5ad9aeb08d09cbdb 435 SUPERFAMILY SSF103473 6 395 9.94E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 SMART SM00267 243 415 1.4E-40 T 22-04-2016 IPR000160 GGDEF domain R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 SUPERFAMILY SSF52172 3 104 1.31E-13 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 Gene3D G3DSA:3.30.70.270 259 413 9.0E-44 T 22-04-2016 R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 Pfam PF00072 Response regulator receiver domain 5 105 4.0E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 Pfam PF00072 Response regulator receiver domain 127 236 6.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 SUPERFAMILY SSF55073 261 413 5.73E-39 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 410 2.9E-36 T 22-04-2016 IPR000160 GGDEF domain R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 413 1.4E-40 T 22-04-2016 IPR000160 GGDEF domain R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 SUPERFAMILY SSF52172 123 256 5.12E-33 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 PANTHER PTHR26402 125 235 6.9E-37 T 22-04-2016 R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 Gene3D G3DSA:3.40.50.2300 121 244 3.3E-33 T 22-04-2016 R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 SMART SM00448 125 239 3.9E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 SMART SM00448 2 119 8.0E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS14995 2d665d1dc18551db5b0943f0bd912de4 420 Gene3D G3DSA:3.40.50.2300 3 106 1.4E-13 T 22-04-2016 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 106 129 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 Gene3D G3DSA:3.40.1390.10 13 97 8.4E-18 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 Gene3D G3DSA:3.40.1190.10 102 332 5.2E-76 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 SUPERFAMILY SSF53244 329 474 3.53E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 PANTHER PTHR23135 8 477 1.6E-155 T 22-04-2016 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 SUPERFAMILY SSF63418 3 95 3.27E-16 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 SUPERFAMILY SSF53623 102 326 6.67E-73 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 Pfam PF08245 Mur ligase middle domain 108 308 5.3E-51 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 19 474 1.5E-138 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 Pfam PF01225 Mur ligase family, catalytic domain 20 86 5.9E-8 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 412 2.9E-19 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 479 29.817 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 PANTHER PTHR23135:SF4 8 477 1.6E-155 T 22-04-2016 R615_RS13140 f34598851dac1f07874c6740d0bab3fa 489 Gene3D G3DSA:3.90.190.20 333 472 7.5E-43 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 R615_RS11370 23bd167ed3efd1771956150a2ac193d5 168 PANTHER PTHR23091:SF237 2 144 7.1E-26 T 22-04-2016 R615_RS11370 23bd167ed3efd1771956150a2ac193d5 168 PANTHER PTHR23091 2 144 7.1E-26 T 22-04-2016 R615_RS11370 23bd167ed3efd1771956150a2ac193d5 168 SUPERFAMILY SSF55729 2 145 6.48E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS11370 23bd167ed3efd1771956150a2ac193d5 168 Gene3D G3DSA:3.40.630.30 9 139 8.6E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS11370 23bd167ed3efd1771956150a2ac193d5 168 Pfam PF13508 Acetyltransferase (GNAT) domain 52 129 1.3E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS08200 3bfd95dad013b810bc8bb151374b91e3 527 SUPERFAMILY SSF53850 52 282 3.26E-25 T 22-04-2016 R615_RS08200 3bfd95dad013b810bc8bb151374b91e3 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 101 320 1.4E-17 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain R615_RS08200 3bfd95dad013b810bc8bb151374b91e3 527 Gene3D G3DSA:3.90.76.10 83 209 1.7E-16 T 22-04-2016 R615_RS08200 3bfd95dad013b810bc8bb151374b91e3 527 PANTHER PTHR30290 1 260 8.9E-16 T 22-04-2016 R615_RS08200 3bfd95dad013b810bc8bb151374b91e3 527 PANTHER PTHR30290:SF2 1 260 8.9E-16 T 22-04-2016 R615_RS08200 3bfd95dad013b810bc8bb151374b91e3 527 Gene3D G3DSA:3.40.190.10 210 323 2.8E-7 T 22-04-2016 R615_RS12090 6ed215565eb038e3db71cef93aaa2471 228 SUPERFAMILY SSF53335 18 182 1.98E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12090 6ed215565eb038e3db71cef93aaa2471 228 Gene3D G3DSA:3.40.50.150 59 162 6.7E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS12090 6ed215565eb038e3db71cef93aaa2471 228 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 87 146 1.5E-14 T 22-04-2016 R615_RS12090 6ed215565eb038e3db71cef93aaa2471 228 PANTHER PTHR18895:SF3 63 159 5.5E-18 T 22-04-2016 R615_RS12090 6ed215565eb038e3db71cef93aaa2471 228 PANTHER PTHR18895 63 159 5.5E-18 T 22-04-2016 R615_RS17020 9db2ad16e8062f4661ddde03659340f8 134 Pfam PF09086 Domain of unknown function (DUF1924) 40 131 1.6E-40 T 22-04-2016 IPR015170 Protein of unknown function DUF1924 R615_RS17020 9db2ad16e8062f4661ddde03659340f8 134 SUPERFAMILY SSF46626 30 133 5.3E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS17020 9db2ad16e8062f4661ddde03659340f8 134 Gene3D G3DSA:1.10.760.10 25 133 3.8E-47 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS04120 1b07748d29816f7c221485958fbe60fb 124 SMART SM00834 1 41 5.4E-9 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain R615_RS04120 1b07748d29816f7c221485958fbe60fb 124 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 42 1.2E-12 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain R615_RS04120 1b07748d29816f7c221485958fbe60fb 124 Pfam PF09723 Zinc ribbon domain 1 39 5.4E-11 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain R615_RS15920 1ded463219963e60a04c60cf8b557c06 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 25.273 T 22-04-2016 IPR022973 Ribosomal protein L10 R615_RS15920 1ded463219963e60a04c60cf8b557c06 164 Pfam PF00466 Ribosomal protein L10 6 101 6.7E-26 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 R615_RS15920 1ded463219963e60a04c60cf8b557c06 164 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15920 1ded463219963e60a04c60cf8b557c06 164 SUPERFAMILY SSF160369 5 159 1.03E-46 T 22-04-2016 R615_RS15920 1ded463219963e60a04c60cf8b557c06 164 PANTHER PTHR11560 2 161 1.2E-56 T 22-04-2016 R615_RS14375 35ad87a35891bfcf7cb305a5e1c10bf2 344 Gene3D G3DSA:1.10.10.60 283 333 2.0E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS14375 35ad87a35891bfcf7cb305a5e1c10bf2 344 SMART SM00342 247 329 9.6E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS14375 35ad87a35891bfcf7cb305a5e1c10bf2 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 313 329 2.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS14375 35ad87a35891bfcf7cb305a5e1c10bf2 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 313 2.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS14375 35ad87a35891bfcf7cb305a5e1c10bf2 344 PANTHER PTHR11019 131 161 1.9E-31 T 22-04-2016 R615_RS14375 35ad87a35891bfcf7cb305a5e1c10bf2 344 PANTHER PTHR11019 213 337 1.9E-31 T 22-04-2016 R615_RS14375 35ad87a35891bfcf7cb305a5e1c10bf2 344 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 34 156 1.3E-6 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS14375 35ad87a35891bfcf7cb305a5e1c10bf2 344 PANTHER PTHR11019:SF52 131 161 1.9E-31 T 22-04-2016 R615_RS14375 35ad87a35891bfcf7cb305a5e1c10bf2 344 PANTHER PTHR11019:SF52 213 337 1.9E-31 T 22-04-2016 R615_RS14375 35ad87a35891bfcf7cb305a5e1c10bf2 344 SUPERFAMILY SSF46689 283 333 5.38E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS14375 35ad87a35891bfcf7cb305a5e1c10bf2 344 Pfam PF12833 Helix-turn-helix domain 253 330 1.0E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS09995 17d170dd0fd5ef59bc446d45c2a0fe64 334 PANTHER PTHR30151:SF7 120 321 4.3E-83 T 22-04-2016 R615_RS09995 17d170dd0fd5ef59bc446d45c2a0fe64 334 PANTHER PTHR30151:SF7 11 80 4.3E-83 T 22-04-2016 R615_RS09995 17d170dd0fd5ef59bc446d45c2a0fe64 334 SUPERFAMILY SSF161098 119 317 8.76E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS09995 17d170dd0fd5ef59bc446d45c2a0fe64 334 Gene3D G3DSA:1.10.3720.10 119 324 1.2E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS09995 17d170dd0fd5ef59bc446d45c2a0fe64 334 PANTHER PTHR30151 120 321 4.3E-83 T 22-04-2016 R615_RS09995 17d170dd0fd5ef59bc446d45c2a0fe64 334 PANTHER PTHR30151 11 80 4.3E-83 T 22-04-2016 R615_RS09995 17d170dd0fd5ef59bc446d45c2a0fe64 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 142 325 2.7E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS04320 e0d531a4ee307a6fa81ca798077a642e 96 Pfam PF01381 Helix-turn-helix 37 73 1.7E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS04320 e0d531a4ee307a6fa81ca798077a642e 96 Gene3D G3DSA:1.10.260.40 36 88 1.4E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS04320 e0d531a4ee307a6fa81ca798077a642e 96 SUPERFAMILY SSF47413 37 83 3.75E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS04320 e0d531a4ee307a6fa81ca798077a642e 96 PANTHER PTHR36511 1 94 1.7E-20 T 22-04-2016 R615_RS06315 7185214f7197e10ac9249ab961e2490a 395 PANTHER PTHR24421 105 390 3.7E-35 T 22-04-2016 R615_RS06315 7185214f7197e10ac9249ab961e2490a 395 SUPERFAMILY SSF55874 276 391 2.86E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS06315 7185214f7197e10ac9249ab961e2490a 395 Pfam PF07730 Histidine kinase 203 268 2.4E-10 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 R615_RS06315 7185214f7197e10ac9249ab961e2490a 395 PANTHER PTHR24421:SF15 105 390 3.7E-35 T 22-04-2016 R615_RS14095 92e4f22c80121508fd6add3c3858ccad 296 SUPERFAMILY SSF46565 153 289 5.55E-28 T 22-04-2016 IPR001623 DnaJ domain R615_RS14095 92e4f22c80121508fd6add3c3858ccad 296 Pfam PF05099 Tellurite resistance protein TerB 69 191 5.3E-18 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal R615_RS14095 92e4f22c80121508fd6add3c3858ccad 296 Pfam PF00226 DnaJ domain 227 287 3.8E-11 T 22-04-2016 IPR001623 DnaJ domain R615_RS14095 92e4f22c80121508fd6add3c3858ccad 296 Gene3D G3DSA:1.10.287.110 231 288 1.2E-14 T 22-04-2016 IPR001623 DnaJ domain R615_RS14095 92e4f22c80121508fd6add3c3858ccad 296 SMART SM00271 226 291 1.6E-16 T 22-04-2016 IPR001623 DnaJ domain R615_RS14095 92e4f22c80121508fd6add3c3858ccad 296 Gene3D G3DSA:1.10.3680.10 21 230 1.7E-27 T 22-04-2016 IPR029024 TerB-like R615_RS14095 92e4f22c80121508fd6add3c3858ccad 296 PRINTS PR00625 DnaJ domain signature 229 247 3.7E-9 T 22-04-2016 IPR001623 DnaJ domain R615_RS14095 92e4f22c80121508fd6add3c3858ccad 296 PRINTS PR00625 DnaJ domain signature 271 291 3.7E-9 T 22-04-2016 IPR001623 DnaJ domain R615_RS14095 92e4f22c80121508fd6add3c3858ccad 296 PRINTS PR00625 DnaJ domain signature 247 262 3.7E-9 T 22-04-2016 IPR001623 DnaJ domain R615_RS03075 6c89116710a8d56beff3c94154ff6f64 312 SUPERFAMILY SSF55073 175 274 7.38E-9 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS03075 6c89116710a8d56beff3c94154ff6f64 312 Gene3D G3DSA:3.30.70.270 170 274 1.0E-11 T 22-04-2016 R615_RS03075 6c89116710a8d56beff3c94154ff6f64 312 SMART SM00267 158 312 0.0031 T 22-04-2016 IPR000160 GGDEF domain R615_RS03075 6c89116710a8d56beff3c94154ff6f64 312 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 267 4.9E-10 T 22-04-2016 IPR000160 GGDEF domain R615_RS11245 cf9ad5370c55d7bb736f96f5613f90c8 681 PANTHER PTHR22550 11 539 3.2E-52 T 22-04-2016 R615_RS11245 cf9ad5370c55d7bb736f96f5613f90c8 681 Pfam PF13519 von Willebrand factor type A domain 102 209 2.6E-14 T 22-04-2016 IPR002035 von Willebrand factor, type A R615_RS11245 cf9ad5370c55d7bb736f96f5613f90c8 681 Gene3D G3DSA:1.25.40.10 388 446 8.2E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS11245 cf9ad5370c55d7bb736f96f5613f90c8 681 SUPERFAMILY SSF48452 386 447 5.82E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS11245 cf9ad5370c55d7bb736f96f5613f90c8 681 SUPERFAMILY SSF53300 99 237 2.52E-16 T 22-04-2016 IPR002035 von Willebrand factor, type A R615_RS11245 cf9ad5370c55d7bb736f96f5613f90c8 681 SMART SM00327 98 270 2.2E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A R615_RS11245 cf9ad5370c55d7bb736f96f5613f90c8 681 Pfam PF07719 Tetratricopeptide repeat 411 441 4.9E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 R615_RS11245 cf9ad5370c55d7bb736f96f5613f90c8 681 PANTHER PTHR22550:SF5 11 539 3.2E-52 T 22-04-2016 R615_RS11245 cf9ad5370c55d7bb736f96f5613f90c8 681 SMART SM00028 411 444 7.1E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 R615_RS03910 0b7e954ba9a5442e0d2ac501446c9fb0 280 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 R615_RS03910 0b7e954ba9a5442e0d2ac501446c9fb0 280 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 273 2.9E-99 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 R615_RS03910 0b7e954ba9a5442e0d2ac501446c9fb0 280 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 R615_RS03910 0b7e954ba9a5442e0d2ac501446c9fb0 280 PANTHER PTHR20941:SF1 3 279 5.6E-120 T 22-04-2016 R615_RS03910 0b7e954ba9a5442e0d2ac501446c9fb0 280 PANTHER PTHR20941 3 279 5.6E-120 T 22-04-2016 R615_RS03910 0b7e954ba9a5442e0d2ac501446c9fb0 280 SUPERFAMILY SSF51717 3 276 4.58E-100 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 R615_RS03910 0b7e954ba9a5442e0d2ac501446c9fb0 280 Pfam PF00809 Pterin binding enzyme 18 259 9.4E-86 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 R615_RS03910 0b7e954ba9a5442e0d2ac501446c9fb0 280 Gene3D G3DSA:3.20.20.20 12 274 1.1E-107 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 R615_RS17495 98445fb6ef044566ba7a664a660b8bfc 260 PANTHER PTHR14969 32 239 8.1E-14 T 22-04-2016 R615_RS17495 98445fb6ef044566ba7a664a660b8bfc 260 SMART SM00014 75 186 8.1E-6 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase R615_RS17495 98445fb6ef044566ba7a664a660b8bfc 260 Gene3D G3DSA:1.20.144.10 27 200 3.9E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase R615_RS17495 98445fb6ef044566ba7a664a660b8bfc 260 SUPERFAMILY SSF48317 14 200 1.05E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase R615_RS17495 98445fb6ef044566ba7a664a660b8bfc 260 Pfam PF01569 PAP2 superfamily 80 191 8.3E-18 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase R615_RS05500 3fc3aaab0156abf87e2ca6df043fd967 149 Pfam PF01402 Ribbon-helix-helix protein, copG family 10 47 5.1E-7 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 R615_RS05500 3fc3aaab0156abf87e2ca6df043fd967 149 Gene3D G3DSA:1.10.1220.10 9 51 6.1E-10 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 R615_RS05500 3fc3aaab0156abf87e2ca6df043fd967 149 Gene3D G3DSA:3.30.70.1150 57 135 6.7E-22 T 22-04-2016 R615_RS05500 3fc3aaab0156abf87e2ca6df043fd967 149 SUPERFAMILY SSF55021 59 135 2.52E-18 T 22-04-2016 R615_RS05500 3fc3aaab0156abf87e2ca6df043fd967 149 Pfam PF08753 NikR C terminal nickel binding domain 61 134 6.2E-23 T 22-04-2016 IPR014864 Transcription factor, NikR, nickel binding C-terminal R615_RS05500 3fc3aaab0156abf87e2ca6df043fd967 149 SUPERFAMILY SSF47598 7 52 7.41E-8 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 R615_RS05500 3fc3aaab0156abf87e2ca6df043fd967 149 PANTHER PTHR34719 5 135 5.5E-34 T 22-04-2016 R615_RS05500 3fc3aaab0156abf87e2ca6df043fd967 149 PANTHER PTHR34719:SF2 5 135 5.5E-34 T 22-04-2016 R615_RS05500 3fc3aaab0156abf87e2ca6df043fd967 149 Hamap MF_00476 Putative nickel-responsive regulator [nikR]. 8 138 20.69 T 22-04-2016 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 R615_RS06940 0167a1420a00cc600b717622def3dd36 308 PANTHER PTHR11863 114 270 7.6E-15 T 22-04-2016 R615_RS06940 0167a1420a00cc600b717622def3dd36 308 PANTHER PTHR11863 6 22 7.6E-15 T 22-04-2016 R615_RS06940 0167a1420a00cc600b717622def3dd36 308 PANTHER PTHR11863 68 87 7.6E-15 T 22-04-2016 R615_RS06940 0167a1420a00cc600b717622def3dd36 308 PANTHER PTHR11863:SF2 114 270 7.6E-15 T 22-04-2016 R615_RS06940 0167a1420a00cc600b717622def3dd36 308 PANTHER PTHR11863:SF2 6 22 7.6E-15 T 22-04-2016 R615_RS06940 0167a1420a00cc600b717622def3dd36 308 PANTHER PTHR11863:SF2 68 87 7.6E-15 T 22-04-2016 R615_RS06940 0167a1420a00cc600b717622def3dd36 308 Pfam PF04116 Fatty acid hydroxylase superfamily 120 252 7.1E-26 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 R615_RS09010 06219b219ee6366428a9b89bea9958d0 135 PANTHER PTHR30558:SF3 1 134 1.7E-29 T 22-04-2016 R615_RS09010 06219b219ee6366428a9b89bea9958d0 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 132 2.0E-30 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 R615_RS09010 06219b219ee6366428a9b89bea9958d0 135 PANTHER PTHR30558 1 134 1.7E-29 T 22-04-2016 R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 SUPERFAMILY SSF53474 37 308 8.74E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 PANTHER PTHR10992 39 309 7.2E-50 T 22-04-2016 R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 253 267 1.0E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 130 143 1.0E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 99 1.0E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 144 157 1.0E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 PRINTS PR00412 Epoxide hydrolase signature 144 157 4.8E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 PRINTS PR00412 Epoxide hydrolase signature 84 99 4.8E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 PRINTS PR00412 Epoxide hydrolase signature 130 143 4.8E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 PRINTS PR00412 Epoxide hydrolase signature 284 306 4.8E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 PANTHER PTHR10992:SF818 39 309 7.2E-50 T 22-04-2016 R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 Pfam PF00561 alpha/beta hydrolase fold 59 290 2.5E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS11000 29d9c30d9784ae0d4508cd8af0395479 323 Gene3D G3DSA:3.40.50.1820 39 305 1.2E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS06945 da52564b47ee1ee4005d1e7b6565380f 286 Gene3D G3DSA:1.10.510.10 140 223 2.0E-18 T 22-04-2016 R615_RS06945 da52564b47ee1ee4005d1e7b6565380f 286 Gene3D G3DSA:3.30.200.20 17 125 1.4E-13 T 22-04-2016 R615_RS06945 da52564b47ee1ee4005d1e7b6565380f 286 SMART SM00090 2 228 3.7E-15 T 22-04-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 R615_RS06945 da52564b47ee1ee4005d1e7b6565380f 286 PANTHER PTHR10593 6 277 1.1E-133 T 22-04-2016 R615_RS06945 da52564b47ee1ee4005d1e7b6565380f 286 PANTHER PTHR10593:SF19 6 277 1.1E-133 T 22-04-2016 R615_RS06945 da52564b47ee1ee4005d1e7b6565380f 286 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 22-04-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 R615_RS06945 da52564b47ee1ee4005d1e7b6565380f 286 SUPERFAMILY SSF56112 18 225 7.02E-21 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS06945 da52564b47ee1ee4005d1e7b6565380f 286 Pfam PF01163 RIO1 family 30 223 6.8E-41 T 22-04-2016 R615_RS12590 267d5543d32c8b0cd53dcbb33726463d 319 PANTHER PTHR10992 55 317 3.7E-51 T 22-04-2016 R615_RS12590 267d5543d32c8b0cd53dcbb33726463d 319 Gene3D G3DSA:3.40.50.1820 55 317 7.4E-57 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS12590 267d5543d32c8b0cd53dcbb33726463d 319 Pfam PF00561 alpha/beta hydrolase fold 68 302 1.8E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS12590 267d5543d32c8b0cd53dcbb33726463d 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 108 1.7E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS12590 267d5543d32c8b0cd53dcbb33726463d 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 138 151 1.7E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS12590 267d5543d32c8b0cd53dcbb33726463d 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 152 165 1.7E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS12590 267d5543d32c8b0cd53dcbb33726463d 319 PRINTS PR00111 Alpha/beta hydrolase fold signature 261 275 1.7E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS12590 267d5543d32c8b0cd53dcbb33726463d 319 SUPERFAMILY SSF53474 56 316 7.43E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS04055 b991e6b30a28cf1c7efc879b3a3f9f4d 342 Pfam PF08003 Protein of unknown function (DUF1698) 31 341 1.5E-127 T 22-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like R615_RS04055 b991e6b30a28cf1c7efc879b3a3f9f4d 342 SUPERFAMILY SSF53335 107 338 5.93E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS04055 b991e6b30a28cf1c7efc879b3a3f9f4d 342 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 28 342 51.48 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 R615_RS04055 b991e6b30a28cf1c7efc879b3a3f9f4d 342 PANTHER PTHR10108 102 342 2.0E-102 T 22-04-2016 R615_RS04055 b991e6b30a28cf1c7efc879b3a3f9f4d 342 Gene3D G3DSA:3.40.50.150 107 334 3.6E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS04055 b991e6b30a28cf1c7efc879b3a3f9f4d 342 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 27 341 2.0E-137 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 R615_RS04055 b991e6b30a28cf1c7efc879b3a3f9f4d 342 PANTHER PTHR10108:SF847 102 342 2.0E-102 T 22-04-2016 R615_RS02930 16387b8d06b8c6804beee0b77408e549 260 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 160 257 6.4E-31 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 R615_RS02930 16387b8d06b8c6804beee0b77408e549 260 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 260 22.269 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 R615_RS02930 16387b8d06b8c6804beee0b77408e549 260 PANTHER PTHR34108:SF1 5 133 5.9E-39 T 22-04-2016 R615_RS02930 16387b8d06b8c6804beee0b77408e549 260 PANTHER PTHR34108:SF1 152 260 5.9E-39 T 22-04-2016 R615_RS02930 16387b8d06b8c6804beee0b77408e549 260 Gene3D G3DSA:2.160.20.70 146 259 1.6E-37 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 R615_RS02930 16387b8d06b8c6804beee0b77408e549 260 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 259 2.2E-55 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 R615_RS02930 16387b8d06b8c6804beee0b77408e549 260 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 90 9.4E-16 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 R615_RS02930 16387b8d06b8c6804beee0b77408e549 260 PANTHER PTHR34108 5 133 5.9E-39 T 22-04-2016 R615_RS02930 16387b8d06b8c6804beee0b77408e549 260 PANTHER PTHR34108 152 260 5.9E-39 T 22-04-2016 R615_RS02930 16387b8d06b8c6804beee0b77408e549 260 SUPERFAMILY SSF63848 157 259 2.88E-30 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 R615_RS09085 57b60ae659d8c9065beaae8dda2926ac 280 SUPERFAMILY SSF56752 6 249 1.7E-51 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 R615_RS09085 57b60ae659d8c9065beaae8dda2926ac 280 PANTHER PTHR11825:SF55 8 247 2.4E-47 T 22-04-2016 R615_RS09085 57b60ae659d8c9065beaae8dda2926ac 280 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 20 247 3.5E-61 T 22-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 R615_RS09085 57b60ae659d8c9065beaae8dda2926ac 280 Gene3D G3DSA:3.20.10.10 133 252 1.1E-30 T 22-04-2016 R615_RS09085 57b60ae659d8c9065beaae8dda2926ac 280 Pfam PF01063 Amino-transferase class IV 30 247 4.1E-34 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 R615_RS09085 57b60ae659d8c9065beaae8dda2926ac 280 PANTHER PTHR11825 8 247 2.4E-47 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 R615_RS09085 57b60ae659d8c9065beaae8dda2926ac 280 Gene3D G3DSA:3.30.470.10 8 108 9.0E-19 T 22-04-2016 R615_RS04590 8b732d15f77efde2194cc802da82cf11 156 Pfam PF05130 FlgN protein 5 145 8.0E-18 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 R615_RS04590 8b732d15f77efde2194cc802da82cf11 156 Gene3D G3DSA:1.20.58.300 8 129 1.1E-13 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 R615_RS04590 8b732d15f77efde2194cc802da82cf11 156 SUPERFAMILY SSF140566 8 129 4.32E-15 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 R615_RS07420 4f27b094b1395e93745aeae5574aad0b 331 Gene3D G3DSA:3.30.70.270 166 327 2.0E-42 T 22-04-2016 R615_RS07420 4f27b094b1395e93745aeae5574aad0b 331 PANTHER PTHR10799 123 323 2.0E-17 T 22-04-2016 R615_RS07420 4f27b094b1395e93745aeae5574aad0b 331 PANTHER PTHR10799:SF750 123 323 2.0E-17 T 22-04-2016 R615_RS07420 4f27b094b1395e93745aeae5574aad0b 331 SUPERFAMILY SSF55073 169 328 1.02E-38 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS07420 4f27b094b1395e93745aeae5574aad0b 331 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 324 1.8E-36 T 22-04-2016 IPR000160 GGDEF domain R615_RS07420 4f27b094b1395e93745aeae5574aad0b 331 SMART SM00267 153 329 1.4E-43 T 22-04-2016 IPR000160 GGDEF domain R615_RS07420 4f27b094b1395e93745aeae5574aad0b 331 Gene3D G3DSA:3.30.450.40 4 151 2.0E-5 T 22-04-2016 IPR029016 GAF domain-like R615_RS07420 4f27b094b1395e93745aeae5574aad0b 331 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 325 3.7E-37 T 22-04-2016 IPR000160 GGDEF domain R615_RS07420 4f27b094b1395e93745aeae5574aad0b 331 SUPERFAMILY SSF55781 12 151 1.48E-8 T 22-04-2016 IPR029016 GAF domain-like R615_RS15355 3207ad270fe3cf2c68a97bc8fcc18ac0 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.4E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15355 3207ad270fe3cf2c68a97bc8fcc18ac0 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.4E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15355 3207ad270fe3cf2c68a97bc8fcc18ac0 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.4E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15355 3207ad270fe3cf2c68a97bc8fcc18ac0 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.4E-17 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15355 3207ad270fe3cf2c68a97bc8fcc18ac0 76 PANTHER PTHR13479 2 74 6.6E-32 T 22-04-2016 R615_RS15355 3207ad270fe3cf2c68a97bc8fcc18ac0 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15355 3207ad270fe3cf2c68a97bc8fcc18ac0 76 Gene3D G3DSA:4.10.640.10 8 74 1.8E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15355 3207ad270fe3cf2c68a97bc8fcc18ac0 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 6.0E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15355 3207ad270fe3cf2c68a97bc8fcc18ac0 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.887 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15355 3207ad270fe3cf2c68a97bc8fcc18ac0 76 Pfam PF01084 Ribosomal protein S18 19 68 8.3E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15355 3207ad270fe3cf2c68a97bc8fcc18ac0 76 SUPERFAMILY SSF46911 3 74 4.19E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15355 3207ad270fe3cf2c68a97bc8fcc18ac0 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 1.1E-36 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS00590 139ea9c99023f001a98f22ec9a14c60d 352 PANTHER PTHR34700:SF2 1 348 4.2E-61 T 22-04-2016 R615_RS00590 139ea9c99023f001a98f22ec9a14c60d 352 SMART SM00257 32 80 0.0079 T 22-04-2016 IPR018392 LysM domain R615_RS00590 139ea9c99023f001a98f22ec9a14c60d 352 PANTHER PTHR34700 1 348 4.2E-61 T 22-04-2016 R615_RS00590 139ea9c99023f001a98f22ec9a14c60d 352 SUPERFAMILY SSF54106 31 78 2.88E-7 T 22-04-2016 IPR018392 LysM domain R615_RS00590 139ea9c99023f001a98f22ec9a14c60d 352 Pfam PF01476 LysM domain 33 77 8.1E-13 T 22-04-2016 IPR018392 LysM domain R615_RS00590 139ea9c99023f001a98f22ec9a14c60d 352 Gene3D G3DSA:3.10.350.10 31 77 2.1E-8 T 22-04-2016 IPR018392 LysM domain R615_RS09480 6a55dd786e1e61febb5d977ac755e60e 249 Gene3D G3DSA:3.40.50.1820 7 241 2.3E-21 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS09480 6a55dd786e1e61febb5d977ac755e60e 249 SUPERFAMILY SSF53474 6 242 1.36E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS09480 6a55dd786e1e61febb5d977ac755e60e 249 Pfam PF12697 Alpha/beta hydrolase family 24 239 7.2E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS13650 e4373ca257c5e2847b4544d3d2c4c243 283 Gene3D G3DSA:3.20.20.70 133 270 8.0E-60 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS13650 e4373ca257c5e2847b4544d3d2c4c243 283 SUPERFAMILY SSF51690 113 281 5.49E-60 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 R615_RS13650 e4373ca257c5e2847b4544d3d2c4c243 283 PANTHER PTHR32179 9 282 2.9E-127 T 22-04-2016 R615_RS13650 e4373ca257c5e2847b4544d3d2c4c243 283 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 113 280 4.0E-60 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 R615_RS13650 e4373ca257c5e2847b4544d3d2c4c243 283 SUPERFAMILY SSF54675 5 111 3.24E-33 T 22-04-2016 R615_RS13650 e4373ca257c5e2847b4544d3d2c4c243 283 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 14 280 9.7E-100 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 R615_RS13650 e4373ca257c5e2847b4544d3d2c4c243 283 PIRSF PIRSF006250 4 283 3.0E-107 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD R615_RS13650 e4373ca257c5e2847b4544d3d2c4c243 283 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 110 1.8E-27 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 R615_RS13650 e4373ca257c5e2847b4544d3d2c4c243 283 Gene3D G3DSA:3.90.1170.20 6 132 1.3E-50 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 R615_RS16105 0b2d366b3cc2704c0012535d54bf3fd7 2253 SUPERFAMILY SSF103647 1754 1832 7.59E-8 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS16105 0b2d366b3cc2704c0012535d54bf3fd7 2253 Gene3D G3DSA:4.10.1080.10 1780 1861 4.7E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS16105 0b2d366b3cc2704c0012535d54bf3fd7 2253 Gene3D G3DSA:4.10.1080.10 1862 1989 1.8E-11 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS16105 0b2d366b3cc2704c0012535d54bf3fd7 2253 Gene3D G3DSA:4.10.1080.10 1688 1777 2.0E-10 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS16105 0b2d366b3cc2704c0012535d54bf3fd7 2253 SUPERFAMILY SSF103647 1951 2052 5.89E-7 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS16105 0b2d366b3cc2704c0012535d54bf3fd7 2253 SUPERFAMILY SSF103647 1897 1971 2.88E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS16105 0b2d366b3cc2704c0012535d54bf3fd7 2253 SUPERFAMILY SSF56925 2101 2253 3.92E-11 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS16105 0b2d366b3cc2704c0012535d54bf3fd7 2253 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1805 1817 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site R615_RS01610 44b43e64e269996c986e7c775cd610a5 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 4.8E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS01610 44b43e64e269996c986e7c775cd610a5 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 4.8E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS01610 44b43e64e269996c986e7c775cd610a5 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 4.8E-25 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS01610 44b43e64e269996c986e7c775cd610a5 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 305 519 7.9E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS01610 44b43e64e269996c986e7c775cd610a5 521 SMART SM00304 191 244 1.6E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS01610 44b43e64e269996c986e7c775cd610a5 521 SMART SM00304 279 339 17.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS01610 44b43e64e269996c986e7c775cd610a5 521 SUPERFAMILY SSF58104 212 520 4.05E-72 T 22-04-2016 R615_RS01610 44b43e64e269996c986e7c775cd610a5 521 PANTHER PTHR32089 29 520 4.4E-107 T 22-04-2016 R615_RS01610 44b43e64e269996c986e7c775cd610a5 521 SMART SM00283 259 520 8.3E-81 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS01610 44b43e64e269996c986e7c775cd610a5 521 Pfam PF00672 HAMP domain 172 238 2.2E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS01610 44b43e64e269996c986e7c775cd610a5 521 Gene3D G3DSA:1.10.287.950 273 491 3.5E-54 T 22-04-2016 R615_RS16615 ef6e3fbbc24963756b5fdafa9a731696 317 SUPERFAMILY SSF53474 56 316 1.01E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS16615 ef6e3fbbc24963756b5fdafa9a731696 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 257 271 4.3E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS16615 ef6e3fbbc24963756b5fdafa9a731696 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 113 4.3E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS16615 ef6e3fbbc24963756b5fdafa9a731696 317 PRINTS PR00111 Alpha/beta hydrolase fold signature 146 159 4.3E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS16615 ef6e3fbbc24963756b5fdafa9a731696 317 Pfam PF12146 Serine aminopeptidase, S33 69 300 5.7E-32 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 R615_RS16615 ef6e3fbbc24963756b5fdafa9a731696 317 Gene3D G3DSA:3.40.50.1820 56 316 6.6E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS16615 ef6e3fbbc24963756b5fdafa9a731696 317 PANTHER PTHR11614 57 317 2.4E-39 T 22-04-2016 R615_RS04850 5cfe8a06427092398b0a8385190043d0 295 Gene3D G3DSA:3.90.25.10 222 283 8.8E-23 T 22-04-2016 R615_RS04850 5cfe8a06427092398b0a8385190043d0 295 Gene3D G3DSA:3.40.50.720 4 198 2.1E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04850 5cfe8a06427092398b0a8385190043d0 295 Pfam PF04321 RmlD substrate binding domain 4 289 1.1E-92 T 22-04-2016 IPR029903 RmlD-like substrate binding domain R615_RS04850 5cfe8a06427092398b0a8385190043d0 295 SUPERFAMILY SSF51735 4 289 4.21E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS04850 5cfe8a06427092398b0a8385190043d0 295 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 5 289 3.0E-91 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family R615_RS04850 5cfe8a06427092398b0a8385190043d0 295 PANTHER PTHR10491:SF4 1 294 1.4E-83 T 22-04-2016 R615_RS04850 5cfe8a06427092398b0a8385190043d0 295 PANTHER PTHR10491 1 294 1.4E-83 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family R615_RS14905 2870689e7fcd8e1e844c4c37d18096f3 354 Gene3D G3DSA:3.20.20.210 2 349 7.2E-158 T 22-04-2016 R615_RS14905 2870689e7fcd8e1e844c4c37d18096f3 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 345 6.4E-138 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS14905 2870689e7fcd8e1e844c4c37d18096f3 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS14905 2870689e7fcd8e1e844c4c37d18096f3 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.576 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS14905 2870689e7fcd8e1e844c4c37d18096f3 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS14905 2870689e7fcd8e1e844c4c37d18096f3 354 SUPERFAMILY SSF51726 2 352 1.83E-126 T 22-04-2016 R615_RS14905 2870689e7fcd8e1e844c4c37d18096f3 354 PANTHER PTHR21091 1 349 8.7E-158 T 22-04-2016 R615_RS14905 2870689e7fcd8e1e844c4c37d18096f3 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 3.0E-143 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 R615_RS14905 2870689e7fcd8e1e844c4c37d18096f3 354 PANTHER PTHR21091:SF2 1 349 8.7E-158 T 22-04-2016 R615_RS01770 df6e301f20e41179fb338c1329be156a 97 Pfam PF05488 PAAR motif 19 87 3.6E-23 T 22-04-2016 IPR008727 PAAR motif R615_RS11150 1ba52f6429e0f3e7dde5476335972a83 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 358 3.7E-69 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 R615_RS11150 1ba52f6429e0f3e7dde5476335972a83 364 PANTHER PTHR30469 1 358 4.7E-86 T 22-04-2016 R615_RS11150 1ba52f6429e0f3e7dde5476335972a83 364 PANTHER PTHR30469:SF10 1 358 4.7E-86 T 22-04-2016 R615_RS11150 1ba52f6429e0f3e7dde5476335972a83 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 265 3.5E-9 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain R615_RS11150 1ba52f6429e0f3e7dde5476335972a83 364 Gene3D G3DSA:2.40.50.100 155 186 1.3E-11 T 22-04-2016 R615_RS11150 1ba52f6429e0f3e7dde5476335972a83 364 Gene3D G3DSA:2.40.50.100 63 94 1.3E-11 T 22-04-2016 R615_RS11150 1ba52f6429e0f3e7dde5476335972a83 364 SUPERFAMILY SSF111369 51 271 3.92E-33 T 22-04-2016 R615_RS10885 cc0b2d4e101a23ac56376cc8fa855f01 395 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 20 179 1.6E-9 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF R615_RS10885 cc0b2d4e101a23ac56376cc8fa855f01 395 Gene3D G3DSA:3.40.190.10 20 117 6.5E-7 T 22-04-2016 R615_RS10885 cc0b2d4e101a23ac56376cc8fa855f01 395 SUPERFAMILY SSF53850 18 210 2.53E-20 T 22-04-2016 R615_RS10885 cc0b2d4e101a23ac56376cc8fa855f01 395 Gene3D G3DSA:3.40.190.10 118 166 3.3E-4 T 22-04-2016 R615_RS01070 6d6491a97d709bb44820519c095d5c4d 83 Pfam PF06611 Protein of unknown function (DUF1145) 1 56 2.7E-12 T 22-04-2016 IPR009525 Protein of unknown function DUF1145 R615_RS02285 f4ff1fbc2357835436019d5bba81bfd8 221 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 34.643 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 R615_RS02285 f4ff1fbc2357835436019d5bba81bfd8 221 Gene3D G3DSA:2.40.50.140 201 221 8.5E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS02285 f4ff1fbc2357835436019d5bba81bfd8 221 Gene3D G3DSA:2.40.50.140 3 111 8.5E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS02285 f4ff1fbc2357835436019d5bba81bfd8 221 Gene3D G3DSA:2.40.50.140 155 156 8.5E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS02285 f4ff1fbc2357835436019d5bba81bfd8 221 SUPERFAMILY SSF50249 3 170 3.29E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS02285 f4ff1fbc2357835436019d5bba81bfd8 221 PANTHER PTHR10302 3 180 2.9E-48 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 R615_RS02285 f4ff1fbc2357835436019d5bba81bfd8 221 PANTHER PTHR10302 213 221 2.9E-48 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 R615_RS02285 f4ff1fbc2357835436019d5bba81bfd8 221 Pfam PF00436 Single-strand binding protein family 5 108 6.2E-38 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 R615_RS02285 f4ff1fbc2357835436019d5bba81bfd8 221 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 221 9.5E-48 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 R615_RS04495 4c35b26cfbe1c071cdfe5a55f3f7acd5 236 Pfam PF00691 OmpA family 95 188 5.7E-8 T 22-04-2016 IPR006665 OmpA-like domain R615_RS04495 4c35b26cfbe1c071cdfe5a55f3f7acd5 236 Gene3D G3DSA:3.30.1330.60 91 219 4.5E-18 T 22-04-2016 IPR006665 OmpA-like domain R615_RS04495 4c35b26cfbe1c071cdfe5a55f3f7acd5 236 SUPERFAMILY SSF103088 90 219 1.44E-12 T 22-04-2016 IPR006665 OmpA-like domain R615_RS16365 a9380a868c82685925c70a555aec0c7a 362 PANTHER PTHR33376 31 349 4.3E-141 T 22-04-2016 R615_RS16365 a9380a868c82685925c70a555aec0c7a 362 PIRSF PIRSF039026 2 362 1.3E-140 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like R615_RS16365 a9380a868c82685925c70a555aec0c7a 362 PANTHER PTHR33376:SF5 31 349 4.3E-141 T 22-04-2016 R615_RS16365 a9380a868c82685925c70a555aec0c7a 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 327 5.9E-62 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 R615_RS16365 a9380a868c82685925c70a555aec0c7a 362 SUPERFAMILY SSF53850 159 297 9.77E-6 T 22-04-2016 R615_RS12655 58232c584eb508c9a2045ecbbf8a0b9f 476 SUPERFAMILY SSF56935 24 475 8.88E-90 T 22-04-2016 R615_RS12655 58232c584eb508c9a2045ecbbf8a0b9f 476 PANTHER PTHR35093 1 476 4.4E-107 T 22-04-2016 R615_RS12655 58232c584eb508c9a2045ecbbf8a0b9f 476 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 475 7.5E-109 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) R615_RS12655 58232c584eb508c9a2045ecbbf8a0b9f 476 Gene3D G3DSA:2.40.160.60 24 475 1.6E-120 T 22-04-2016 R615_RS12655 58232c584eb508c9a2045ecbbf8a0b9f 476 PANTHER PTHR35093:SF2 1 476 4.4E-107 T 22-04-2016 R615_RS17415 f040ab2e5657c236800994bfb082ae12 484 Pfam PF13401 AAA domain 42 171 5.0E-22 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS17415 f040ab2e5657c236800994bfb082ae12 484 SUPERFAMILY SSF52540 5 269 1.25E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17415 f040ab2e5657c236800994bfb082ae12 484 SMART SM00382 42 195 1.0E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS17415 f040ab2e5657c236800994bfb082ae12 484 Gene3D G3DSA:1.10.101.10 406 479 6.0E-7 T 22-04-2016 IPR002477 Peptidoglycan binding-like R615_RS17415 f040ab2e5657c236800994bfb082ae12 484 SUPERFAMILY SSF47090 404 479 6.91E-6 T 22-04-2016 IPR002477 Peptidoglycan binding-like R615_RS17415 f040ab2e5657c236800994bfb082ae12 484 Gene3D G3DSA:3.40.50.300 29 184 2.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17415 f040ab2e5657c236800994bfb082ae12 484 PANTHER PTHR35894 2 273 2.6E-91 T 22-04-2016 R615_RS17415 f040ab2e5657c236800994bfb082ae12 484 PANTHER PTHR35894:SF2 2 273 2.6E-91 T 22-04-2016 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 Gene3D G3DSA:3.30.565.10 377 536 1.2E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 PANTHER PTHR24423:SF497 26 32 1.9E-45 T 22-04-2016 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 PANTHER PTHR24423:SF497 265 316 1.9E-45 T 22-04-2016 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 PANTHER PTHR24423:SF497 354 535 1.9E-45 T 22-04-2016 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 435 537 2.0E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 Gene3D G3DSA:1.10.287.130 357 376 1.4E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 Gene3D G3DSA:1.10.287.130 283 314 1.4E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 PANTHER PTHR24423 26 32 1.9E-45 T 22-04-2016 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 PANTHER PTHR24423 265 316 1.9E-45 T 22-04-2016 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 PANTHER PTHR24423 354 535 1.9E-45 T 22-04-2016 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 389 5.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 SMART SM00387 430 538 4.6E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 SUPERFAMILY SSF47384 283 323 3.53E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 3.8E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 3.8E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 3.8E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS04270 22a86559503007b1803bb20f302a9a0f 542 SUPERFAMILY SSF55874 378 536 2.36E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS07075 875f3e90f2e5586366c8cc6799d65f1a 346 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 27 308 5.5E-67 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 R615_RS07075 875f3e90f2e5586366c8cc6799d65f1a 346 Gene3D G3DSA:3.20.20.300 15 307 3.2E-78 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 R615_RS07075 875f3e90f2e5586366c8cc6799d65f1a 346 PANTHER PTHR30480 14 311 5.0E-100 T 22-04-2016 R615_RS07075 875f3e90f2e5586366c8cc6799d65f1a 346 SUPERFAMILY SSF51445 16 305 5.58E-72 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily R615_RS07075 875f3e90f2e5586366c8cc6799d65f1a 346 PANTHER PTHR30480:SF7 14 311 5.0E-100 T 22-04-2016 R615_RS07080 f713f9adc8cd475fa2d731333c5ca78f 250 SUPERFAMILY SSF53167 3 247 8.76E-75 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 R615_RS07080 f713f9adc8cd475fa2d731333c5ca78f 250 Gene3D G3DSA:3.40.50.1580 2 249 1.4E-70 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 R615_RS07080 f713f9adc8cd475fa2d731333c5ca78f 250 PANTHER PTHR11904 5 249 2.1E-79 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase R615_RS07080 f713f9adc8cd475fa2d731333c5ca78f 250 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 3 250 32.023 T 22-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 R615_RS07080 f713f9adc8cd475fa2d731333c5ca78f 250 PANTHER PTHR11904:SF1 5 249 2.1E-79 T 22-04-2016 R615_RS07080 f713f9adc8cd475fa2d731333c5ca78f 250 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 51 91 - T 22-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 R615_RS07080 f713f9adc8cd475fa2d731333c5ca78f 250 Pfam PF01048 Phosphorylase superfamily 5 232 6.3E-39 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 R615_RS11060 c720436e02d5a8d493d5cecc45a5f997 700 SUPERFAMILY SSF52540 389 559 1.54E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03460 9649d924b1c7a90b428b8844aa54e54f 190 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 183 3.0E-31 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 R615_RS03460 9649d924b1c7a90b428b8844aa54e54f 190 SUPERFAMILY SSF89028 7 183 2.55E-56 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 R615_RS03460 9649d924b1c7a90b428b8844aa54e54f 190 PANTHER PTHR12213 4 183 3.3E-70 T 22-04-2016 R615_RS03460 9649d924b1c7a90b428b8844aa54e54f 190 Gene3D G3DSA:1.20.1200.10 17 185 3.1E-61 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 R615_RS03460 9649d924b1c7a90b428b8844aa54e54f 190 Pfam PF01923 Cobalamin adenosyltransferase 8 170 1.4E-56 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 R615_RS03460 9649d924b1c7a90b428b8844aa54e54f 190 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 183 4.3E-57 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 R615_RS09735 7d3590cb49446f7005e68df85ccc3d88 268 Gene3D G3DSA:3.30.420.10 106 261 2.1E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS09735 7d3590cb49446f7005e68df85ccc3d88 268 SUPERFAMILY SSF53098 105 264 4.86E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS09735 7d3590cb49446f7005e68df85ccc3d88 268 Pfam PF00665 Integrase core domain 108 221 4.4E-29 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 R615_RS09735 7d3590cb49446f7005e68df85ccc3d88 268 Pfam PF13276 HTH-like domain 26 81 8.0E-19 T 22-04-2016 IPR025948 HTH-like domain R615_RS09735 7d3590cb49446f7005e68df85ccc3d88 268 PANTHER PTHR32552 1 268 1.6E-50 T 22-04-2016 R615_RS10985 1cb47d959af52ceae6639f20ec7469a7 225 PANTHER PTHR30037:SF3 174 206 6.2E-43 T 22-04-2016 R615_RS10985 1cb47d959af52ceae6639f20ec7469a7 225 PANTHER PTHR30037:SF3 1 156 6.2E-43 T 22-04-2016 R615_RS10985 1cb47d959af52ceae6639f20ec7469a7 225 Pfam PF03352 Methyladenine glycosylase 42 134 4.5E-16 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 R615_RS10985 1cb47d959af52ceae6639f20ec7469a7 225 PANTHER PTHR30037 174 206 6.2E-43 T 22-04-2016 R615_RS10985 1cb47d959af52ceae6639f20ec7469a7 225 PANTHER PTHR30037 1 156 6.2E-43 T 22-04-2016 R615_RS10985 1cb47d959af52ceae6639f20ec7469a7 225 SUPERFAMILY SSF48150 37 181 7.69E-33 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 R615_RS10985 1cb47d959af52ceae6639f20ec7469a7 225 Gene3D G3DSA:1.10.340.30 38 138 3.3E-23 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 R615_RS17160 7fba71b8c5a81478b538b2e3d0c05fef 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.1E-27 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS17160 7fba71b8c5a81478b538b2e3d0c05fef 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.008 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS17160 7fba71b8c5a81478b538b2e3d0c05fef 44 Pfam PF00468 Ribosomal protein L34 1 44 5.1E-25 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS17160 7fba71b8c5a81478b538b2e3d0c05fef 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 3.0E-13 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS17160 7fba71b8c5a81478b538b2e3d0c05fef 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS17160 7fba71b8c5a81478b538b2e3d0c05fef 44 PANTHER PTHR14503 1 44 1.7E-23 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS12905 d87bf6935cc2de82a0e703cdd442a52c 311 PANTHER PTHR16222 3 292 1.9E-59 T 22-04-2016 R615_RS12905 d87bf6935cc2de82a0e703cdd442a52c 311 PANTHER PTHR16222:SF12 3 292 1.9E-59 T 22-04-2016 R615_RS12905 d87bf6935cc2de82a0e703cdd442a52c 311 SUPERFAMILY SSF101478 5 295 1.31E-71 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 R615_RS12905 d87bf6935cc2de82a0e703cdd442a52c 311 Pfam PF03747 ADP-ribosylglycohydrolase 11 285 1.0E-67 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 R615_RS13685 02057e3a82c83c9779cf87e4c72060d4 199 Pfam PF01121 Dephospho-CoA kinase 2 177 2.1E-61 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 R615_RS13685 02057e3a82c83c9779cf87e4c72060d4 199 Gene3D G3DSA:3.40.50.300 1 194 2.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13685 02057e3a82c83c9779cf87e4c72060d4 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 185 5.4E-52 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 R615_RS13685 02057e3a82c83c9779cf87e4c72060d4 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 195 25.671 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 R615_RS13685 02057e3a82c83c9779cf87e4c72060d4 199 SUPERFAMILY SSF52540 1 191 5.04E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13685 02057e3a82c83c9779cf87e4c72060d4 199 PANTHER PTHR10695 1 194 3.7E-61 T 22-04-2016 R615_RS04220 ec0ad418cf8797d09cb5555b4049520d 138 SUPERFAMILY SSF51316 1 136 1.0E-42 T 22-04-2016 IPR011057 Mss4-like R615_RS04220 ec0ad418cf8797d09cb5555b4049520d 138 Gene3D G3DSA:3.90.1590.10 2 135 2.1E-36 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 R615_RS04220 ec0ad418cf8797d09cb5555b4049520d 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 116 5.4E-22 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 R615_RS04220 ec0ad418cf8797d09cb5555b4049520d 138 PANTHER PTHR33337 5 134 2.7E-24 T 22-04-2016 R615_RS03405 0232dcdf93fe3fc21c6b9b674a75c50d 286 Pfam PF09851 Short C-terminal domain 258 283 4.5E-7 T 22-04-2016 IPR018649 SHOCT domain R615_RS12390 8c954f07a010f8e8ad77f463ed3e463b 382 Gene3D G3DSA:3.20.20.70 107 327 8.3E-15 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS12390 8c954f07a010f8e8ad77f463ed3e463b 382 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 6 359 2.8E-138 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS12390 8c954f07a010f8e8ad77f463ed3e463b 382 PANTHER PTHR30544:SF5 5 379 1.7E-171 T 22-04-2016 R615_RS12390 8c954f07a010f8e8ad77f463ed3e463b 382 Pfam PF04055 Radical SAM superfamily 111 284 2.4E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 R615_RS12390 8c954f07a010f8e8ad77f463ed3e463b 382 SUPERFAMILY SSF102114 104 309 5.23E-14 T 22-04-2016 R615_RS12390 8c954f07a010f8e8ad77f463ed3e463b 382 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 7 354 71.605 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS12390 8c954f07a010f8e8ad77f463ed3e463b 382 PANTHER PTHR30544 5 379 1.7E-171 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS12390 8c954f07a010f8e8ad77f463ed3e463b 382 PIRSF PIRSF006004 4 367 1.7E-146 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS00105 df7e453a61ca0cc3ace9199b5c1e0217 310 PRINTS PR00111 Alpha/beta hydrolase fold signature 251 265 2.6E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS00105 df7e453a61ca0cc3ace9199b5c1e0217 310 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 105 2.6E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS00105 df7e453a61ca0cc3ace9199b5c1e0217 310 PRINTS PR00111 Alpha/beta hydrolase fold signature 149 162 2.6E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS00105 df7e453a61ca0cc3ace9199b5c1e0217 310 PRINTS PR00111 Alpha/beta hydrolase fold signature 135 148 2.6E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS00105 df7e453a61ca0cc3ace9199b5c1e0217 310 Gene3D G3DSA:3.40.50.1820 41 306 1.6E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS00105 df7e453a61ca0cc3ace9199b5c1e0217 310 SUPERFAMILY SSF53474 40 306 2.84E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS00105 df7e453a61ca0cc3ace9199b5c1e0217 310 PANTHER PTHR10992 44 307 5.1E-57 T 22-04-2016 R615_RS00105 df7e453a61ca0cc3ace9199b5c1e0217 310 Pfam PF00561 alpha/beta hydrolase fold 66 177 4.2E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS08670 ce0b8217800b4b9f4d7ba71a5280596e 290 SUPERFAMILY SSF52540 64 260 1.5E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08670 ce0b8217800b4b9f4d7ba71a5280596e 290 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 6 279 1.2E-118 T 22-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 R615_RS08670 ce0b8217800b4b9f4d7ba71a5280596e 290 PIRSF PIRSF028756 4 290 1.2E-82 T 22-04-2016 IPR016898 Polyphosphate kinase 2 R615_RS08670 ce0b8217800b4b9f4d7ba71a5280596e 290 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 31 268 1.8E-66 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related R615_RS08670 ce0b8217800b4b9f4d7ba71a5280596e 290 Gene3D G3DSA:3.40.50.300 5 287 3.8E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08670 ce0b8217800b4b9f4d7ba71a5280596e 290 PANTHER PTHR34383 27 290 8.7E-114 T 22-04-2016 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 SMART SM00486 153 566 6.6E-64 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 Gene3D G3DSA:3.90.1600.10 405 437 6.6E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 Gene3D G3DSA:3.90.1600.10 523 591 6.6E-11 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 Pfam PF03104 DNA polymerase family B, exonuclease domain 94 302 1.0E-17 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 SUPERFAMILY SSF56672 390 790 3.89E-96 T 22-04-2016 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 Pfam PF00136 DNA polymerase family B 378 737 1.2E-34 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 ProSitePatterns PS00116 DNA polymerase family B signature. 554 562 - T 22-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 421 434 5.7E-9 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 500 512 5.7E-9 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 552 560 5.7E-9 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 PANTHER PTHR10322 153 791 4.5E-141 T 22-04-2016 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 SUPERFAMILY SSF53098 9 394 1.94E-70 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS02640 b7da0c5823c6655fb970ee3084a57a7b 796 Gene3D G3DSA:3.30.420.10 153 370 1.5E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS07335 8c83bc54097ffbd1899ad81349c2aa9a 280 Gene3D G3DSA:3.10.450.50 237 278 3.8E-10 T 22-04-2016 IPR032710 NTF2-like domain R615_RS07335 8c83bc54097ffbd1899ad81349c2aa9a 280 PANTHER PTHR30164 1 268 4.6E-52 T 22-04-2016 R615_RS07335 8c83bc54097ffbd1899ad81349c2aa9a 280 SUPERFAMILY SSF55486 48 247 7.32E-43 T 22-04-2016 R615_RS07335 8c83bc54097ffbd1899ad81349c2aa9a 280 SUPERFAMILY SSF103642 259 277 2.78E-6 T 22-04-2016 R615_RS07335 8c83bc54097ffbd1899ad81349c2aa9a 280 Gene3D G3DSA:3.40.390.10 34 236 4.9E-47 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 R615_RS07335 8c83bc54097ffbd1899ad81349c2aa9a 280 Pfam PF02810 SEC-C motif 261 278 1.5E-8 T 22-04-2016 IPR004027 SEC-C motif R615_RS07335 8c83bc54097ffbd1899ad81349c2aa9a 280 Pfam PF06167 Glucose-regulated metallo-peptidase M90 24 246 9.5E-58 T 22-04-2016 IPR010384 MtfA family R615_RS07860 efc435d121cb2f34c3c7c8b84b7420bc 306 PANTHER PTHR24220 6 298 9.2E-152 T 22-04-2016 R615_RS07860 efc435d121cb2f34c3c7c8b84b7420bc 306 SUPERFAMILY SSF52540 4 231 8.04E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07860 efc435d121cb2f34c3c7c8b84b7420bc 306 PANTHER PTHR24220:SF305 6 298 9.2E-152 T 22-04-2016 R615_RS07860 efc435d121cb2f34c3c7c8b84b7420bc 306 SMART SM00382 30 212 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS07860 efc435d121cb2f34c3c7c8b84b7420bc 306 Pfam PF00005 ABC transporter 21 165 6.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS07860 efc435d121cb2f34c3c7c8b84b7420bc 306 Gene3D G3DSA:3.40.50.300 3 228 2.5E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07860 efc435d121cb2f34c3c7c8b84b7420bc 306 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS06540 a332c49d2a33c6c62b8be15a0bdf5ad7 449 Pfam PF09423 PhoD-like phosphatase 194 407 4.9E-24 T 22-04-2016 IPR018946 Alkaline phosphatase D-related R615_RS06540 a332c49d2a33c6c62b8be15a0bdf5ad7 449 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 51 111 2.6E-7 T 22-04-2016 IPR032093 Phospholipase D, N-terminal R615_RS06540 a332c49d2a33c6c62b8be15a0bdf5ad7 449 Gene3D G3DSA:2.60.40.380 71 121 1.6E-4 T 22-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 R615_RS06540 a332c49d2a33c6c62b8be15a0bdf5ad7 449 SUPERFAMILY SSF56300 129 438 3.45E-24 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS06540 a332c49d2a33c6c62b8be15a0bdf5ad7 449 SUPERFAMILY SSF49363 48 121 4.58E-6 T 22-04-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 R615_RS06540 a332c49d2a33c6c62b8be15a0bdf5ad7 449 PANTHER PTHR33987 1 359 2.3E-28 T 22-04-2016 R615_RS06540 a332c49d2a33c6c62b8be15a0bdf5ad7 449 Gene3D G3DSA:3.60.21.10 128 440 4.5E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS12745 536a064683a2e64e933623ef8ccda829 237 PIRSF PIRSF009120 1 237 2.2E-100 T 22-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 R615_RS12745 536a064683a2e64e933623ef8ccda829 237 SUPERFAMILY SSF56235 2 236 5.09E-34 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal R615_RS12745 536a064683a2e64e933623ef8ccda829 237 Pfam PF00227 Proteasome subunit 4 181 6.9E-10 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 R615_RS12745 536a064683a2e64e933623ef8ccda829 237 Gene3D G3DSA:3.60.20.10 2 192 9.1E-17 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal R615_RS09055 8029ea272dece5961fcf96e3f90bd8e9 159 Gene3D G3DSA:1.20.120.10 34 159 3.6E-29 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 R615_RS09055 8029ea272dece5961fcf96e3f90bd8e9 159 PIRSF PIRSF000027 11 159 5.6E-23 T 22-04-2016 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 R615_RS09055 8029ea272dece5961fcf96e3f90bd8e9 159 SUPERFAMILY SSF47175 33 157 1.62E-26 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 R615_RS09055 8029ea272dece5961fcf96e3f90bd8e9 159 Pfam PF01322 Cytochrome C' 36 157 1.7E-26 T 22-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 R615_RS09850 f6515d6b5676361e4be77e6a56fb52b4 340 SUPERFAMILY SSF53756 2 339 1.36E-76 T 22-04-2016 R615_RS09850 f6515d6b5676361e4be77e6a56fb52b4 340 PANTHER PTHR30160:SF8 1 338 2.5E-114 T 22-04-2016 R615_RS09850 f6515d6b5676361e4be77e6a56fb52b4 340 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 311 1.2E-110 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 R615_RS09850 f6515d6b5676361e4be77e6a56fb52b4 340 Gene3D G3DSA:3.40.50.2000 171 339 4.7E-42 T 22-04-2016 R615_RS09850 f6515d6b5676361e4be77e6a56fb52b4 340 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 310 3.6E-65 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 R615_RS09850 f6515d6b5676361e4be77e6a56fb52b4 340 Gene3D G3DSA:3.40.50.2000 2 157 1.2E-29 T 22-04-2016 R615_RS09850 f6515d6b5676361e4be77e6a56fb52b4 340 PANTHER PTHR30160 1 338 2.5E-114 T 22-04-2016 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 Pfam PF00108 Thiolase, N-terminal domain 5 228 9.4E-45 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 PANTHER PTHR18919:SF12 1 228 8.2E-215 T 22-04-2016 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 PANTHER PTHR18919:SF12 249 401 8.2E-215 T 22-04-2016 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 SUPERFAMILY SSF53901 1 272 1.25E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 Gene3D G3DSA:3.40.47.10 185 284 4.3E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 Gene3D G3DSA:3.40.47.10 4 126 4.3E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 PIRSF PIRSF000429 1 401 9.0E-108 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 1.9E-122 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 SUPERFAMILY SSF53901 279 400 5.35E-41 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 Gene3D G3DSA:3.40.47.10 285 400 3.9E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 Gene3D G3DSA:3.40.47.10 139 184 3.9E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 PANTHER PTHR18919 1 228 8.2E-215 T 22-04-2016 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 PANTHER PTHR18919 249 401 8.2E-215 T 22-04-2016 R615_RS13540 c3736703292234f16b0b466fbdda3c66 401 Pfam PF02803 Thiolase, C-terminal domain 279 400 9.0E-42 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 R615_RS04595 d3b200dc71d761bc9515a98592de080e 101 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 95 7.8E-16 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal R615_RS04595 d3b200dc71d761bc9515a98592de080e 101 SUPERFAMILY SSF101498 22 97 5.1E-16 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 R615_RS04595 d3b200dc71d761bc9515a98592de080e 101 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 97 3.5E-22 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 R615_RS02675 2675839081a1f6ff66231704589d7788 375 SUPERFAMILY SSF51261 153 374 1.05E-42 T 22-04-2016 IPR011055 Duplicated hybrid motif R615_RS02675 2675839081a1f6ff66231704589d7788 375 PANTHER PTHR21666 23 375 9.9E-57 T 22-04-2016 R615_RS02675 2675839081a1f6ff66231704589d7788 375 Pfam PF01551 Peptidase family M23 277 370 5.6E-22 T 22-04-2016 IPR016047 Peptidase M23 R615_RS02675 2675839081a1f6ff66231704589d7788 375 Gene3D G3DSA:2.70.70.10 236 375 2.5E-32 T 22-04-2016 R615_RS02675 2675839081a1f6ff66231704589d7788 375 PANTHER PTHR21666:SF213 23 375 9.9E-57 T 22-04-2016 R615_RS13345 a323741ad80f2b6cbd92410bd249d1ff 670 SUPERFAMILY SSF58104 360 669 9.16E-67 T 22-04-2016 R615_RS13345 a323741ad80f2b6cbd92410bd249d1ff 670 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 472 667 2.2E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS13345 a323741ad80f2b6cbd92410bd249d1ff 670 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 534 563 1.4E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS13345 a323741ad80f2b6cbd92410bd249d1ff 670 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 505 532 1.4E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS13345 a323741ad80f2b6cbd92410bd249d1ff 670 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 428 457 1.4E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 R615_RS13345 a323741ad80f2b6cbd92410bd249d1ff 670 Pfam PF00672 HAMP domain 320 387 2.2E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS13345 a323741ad80f2b6cbd92410bd249d1ff 670 SMART SM00283 407 668 4.6E-63 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS13345 a323741ad80f2b6cbd92410bd249d1ff 670 Gene3D G3DSA:1.10.287.950 423 638 5.2E-52 T 22-04-2016 R615_RS13345 a323741ad80f2b6cbd92410bd249d1ff 670 PANTHER PTHR32089 304 670 4.2E-96 T 22-04-2016 R615_RS13345 a323741ad80f2b6cbd92410bd249d1ff 670 SMART SM00304 338 392 5.2E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS05675 5b0b447488cb480d9d5617c47a52ae18 169 PANTHER PTHR30399 4 163 3.8E-82 T 22-04-2016 R615_RS05675 5b0b447488cb480d9d5617c47a52ae18 169 PANTHER PTHR30399:SF4 4 163 3.8E-82 T 22-04-2016 R615_RS05675 5b0b447488cb480d9d5617c47a52ae18 169 Pfam PF01863 Protein of unknown function DUF45 98 150 1.5E-11 T 22-04-2016 IPR002725 Protein of unknown function DUF45 R615_RS02075 e504997557ec39d0afb77f0fc07b1205 100 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 2.1E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 R615_RS02075 e504997557ec39d0afb77f0fc07b1205 100 PANTHER PTHR33231 1 97 3.9E-35 T 22-04-2016 R615_RS02075 e504997557ec39d0afb77f0fc07b1205 100 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 91 5.8E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 R615_RS02075 e504997557ec39d0afb77f0fc07b1205 100 SUPERFAMILY SSF69754 1 98 1.31E-36 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 R615_RS02075 e504997557ec39d0afb77f0fc07b1205 100 Gene3D G3DSA:3.30.160.100 1 92 1.4E-37 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 R615_RS17650 37f840f5292eaa52200a8881c797d2aa 501 Gene3D G3DSA:3.40.50.1820 63 204 6.5E-11 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS17650 37f840f5292eaa52200a8881c797d2aa 501 PANTHER PTHR10108 254 428 3.0E-31 T 22-04-2016 R615_RS17650 37f840f5292eaa52200a8881c797d2aa 501 PANTHER PTHR10108:SF855 254 428 3.0E-31 T 22-04-2016 R615_RS17650 37f840f5292eaa52200a8881c797d2aa 501 Pfam PF08241 Methyltransferase domain 287 383 6.0E-22 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 R615_RS17650 37f840f5292eaa52200a8881c797d2aa 501 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 245 499 27.247 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 R615_RS17650 37f840f5292eaa52200a8881c797d2aa 501 SUPERFAMILY SSF53335 250 431 1.67E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS17650 37f840f5292eaa52200a8881c797d2aa 501 Gene3D G3DSA:3.40.50.150 249 432 1.8E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS17650 37f840f5292eaa52200a8881c797d2aa 501 SUPERFAMILY SSF53474 24 239 1.77E-11 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS05780 e78736a71d7e2bb5556937eef3afc969 407 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 8 405 7.4E-174 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 R615_RS05780 e78736a71d7e2bb5556937eef3afc969 407 SUPERFAMILY SSF53383 6 402 9.93E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS05780 e78736a71d7e2bb5556937eef3afc969 407 Gene3D G3DSA:3.90.1150.10 285 401 3.3E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS05780 e78736a71d7e2bb5556937eef3afc969 407 PIRSF PIRSF005572 23 403 6.8E-49 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 R615_RS05780 e78736a71d7e2bb5556937eef3afc969 407 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 218 237 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site R615_RS05780 e78736a71d7e2bb5556937eef3afc969 407 PANTHER PTHR11601 8 405 1.4E-189 T 22-04-2016 R615_RS05780 e78736a71d7e2bb5556937eef3afc969 407 PANTHER PTHR11601:SF17 8 405 1.4E-189 T 22-04-2016 R615_RS05780 e78736a71d7e2bb5556937eef3afc969 407 Gene3D G3DSA:3.40.640.10 37 284 1.8E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS05780 e78736a71d7e2bb5556937eef3afc969 407 Pfam PF00266 Aminotransferase class-V 26 395 2.9E-146 T 22-04-2016 IPR000192 Aminotransferase class V domain R615_RS02305 09c9ea341c68bbf3b1ca2512a863d377 185 Pfam PF03942 DTW domain 4 180 1.6E-33 T 22-04-2016 IPR005636 DTW R615_RS02305 09c9ea341c68bbf3b1ca2512a863d377 185 SMART SM01144 2 185 6.7E-42 T 22-04-2016 IPR005636 DTW R615_RS02305 09c9ea341c68bbf3b1ca2512a863d377 185 PANTHER PTHR21392 3 183 4.5E-36 T 22-04-2016 R615_RS10125 0527856c6e3791a5c3508b128d50e2fa 179 PANTHER PTHR14119 2 179 4.4E-47 T 22-04-2016 R615_RS10125 0527856c6e3791a5c3508b128d50e2fa 179 Pfam PF00857 Isochorismatase family 7 155 2.9E-24 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 R615_RS10125 0527856c6e3791a5c3508b128d50e2fa 179 Gene3D G3DSA:3.40.50.850 2 179 2.3E-51 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 R615_RS10125 0527856c6e3791a5c3508b128d50e2fa 179 SUPERFAMILY SSF52499 2 179 9.16E-45 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 R615_RS13175 b633262b5ad7a17eb34b55368b3856ae 109 Pfam PF09951 Protein of unknown function (DUF2185) 22 104 2.2E-35 T 22-04-2016 IPR018689 Domain of unknown function DUF2185 R615_RS13175 b633262b5ad7a17eb34b55368b3856ae 109 PANTHER PTHR38743:SF2 22 109 5.3E-29 T 22-04-2016 R615_RS13175 b633262b5ad7a17eb34b55368b3856ae 109 PANTHER PTHR38743 22 109 5.3E-29 T 22-04-2016 R615_RS08810 85a1aa542e83ff2f8f693e7dfe29fb51 560 Gene3D G3DSA:2.40.50.100 213 244 2.3E-10 T 22-04-2016 R615_RS08810 85a1aa542e83ff2f8f693e7dfe29fb51 560 Gene3D G3DSA:2.40.50.100 129 162 2.3E-10 T 22-04-2016 R615_RS08810 85a1aa542e83ff2f8f693e7dfe29fb51 560 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 111 319 8.8E-84 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain R615_RS08810 85a1aa542e83ff2f8f693e7dfe29fb51 560 PANTHER PTHR30097:SF3 48 411 1.3E-101 T 22-04-2016 R615_RS08810 85a1aa542e83ff2f8f693e7dfe29fb51 560 PANTHER PTHR30097 48 411 1.3E-101 T 22-04-2016 R615_RS08810 85a1aa542e83ff2f8f693e7dfe29fb51 560 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 215 393 2.4E-36 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 R615_RS08810 85a1aa542e83ff2f8f693e7dfe29fb51 560 Pfam PF11604 Copper binding periplasmic protein CusF 419 483 2.5E-20 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF R615_RS08810 85a1aa542e83ff2f8f693e7dfe29fb51 560 SUPERFAMILY SSF111369 127 324 1.07E-19 T 22-04-2016 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 PANTHER PTHR11564:SF7 1 437 2.8E-254 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 Gene3D G3DSA:3.40.50.300 94 296 2.8E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 SUPERFAMILY SSF52540 42 352 3.99E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 Pfam PF02978 Signal peptide binding domain 329 428 1.8E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 SMART SM00963 1 86 3.7E-35 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 SUPERFAMILY SSF47446 298 431 1.06E-43 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 Gene3D G3DSA:1.20.120.140 2 88 5.5E-34 T 22-04-2016 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 Gene3D G3DSA:1.10.260.30 329 432 2.3E-37 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 441 33.564 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 Pfam PF00448 SRP54-type protein, GTPase domain 100 295 1.3E-74 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 SMART SM00962 100 296 1.6E-115 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 SMART SM00382 99 247 2.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 PANTHER PTHR11564 1 437 2.8E-254 T 22-04-2016 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.3E-21 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 R615_RS12265 7c7d8e552971d9f63f70a9dc008fbe88 463 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 7.6E-177 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 R615_RS00135 3251137c08cc6ea5a89f82b11d717695 210 Pfam PF05728 Uncharacterised protein family (UPF0227) 19 202 8.0E-49 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA R615_RS00135 3251137c08cc6ea5a89f82b11d717695 210 SUPERFAMILY SSF53474 19 208 9.09E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS00135 3251137c08cc6ea5a89f82b11d717695 210 Gene3D G3DSA:3.40.50.1820 18 201 1.7E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS00135 3251137c08cc6ea5a89f82b11d717695 210 PANTHER PTHR35602:SF3 19 207 6.1E-65 T 22-04-2016 R615_RS00135 3251137c08cc6ea5a89f82b11d717695 210 PANTHER PTHR35602 19 207 6.1E-65 T 22-04-2016 R615_RS04150 ff6e3a89e5b09956f76a4f95c01c0ef6 394 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 30 347 2.8E-134 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC R615_RS04150 ff6e3a89e5b09956f76a4f95c01c0ef6 394 PANTHER PTHR30482 1 81 6.1E-98 T 22-04-2016 R615_RS04150 ff6e3a89e5b09956f76a4f95c01c0ef6 394 PANTHER PTHR30482 112 377 6.1E-98 T 22-04-2016 R615_RS04150 ff6e3a89e5b09956f76a4f95c01c0ef6 394 PANTHER PTHR30482:SF4 1 81 6.1E-98 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC R615_RS04150 ff6e3a89e5b09956f76a4f95c01c0ef6 394 PANTHER PTHR30482:SF4 112 377 6.1E-98 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC R615_RS04150 ff6e3a89e5b09956f76a4f95c01c0ef6 394 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 337 6.3E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 R615_RS10950 21a7f8ae71bbcf9d752fb797caedcce5 292 SUPERFAMILY SSF54637 5 115 1.45E-33 T 22-04-2016 IPR029069 HotDog domain R615_RS10950 21a7f8ae71bbcf9d752fb797caedcce5 292 SUPERFAMILY SSF54637 117 285 5.49E-60 T 22-04-2016 IPR029069 HotDog domain R615_RS10950 21a7f8ae71bbcf9d752fb797caedcce5 292 PANTHER PTHR11066 17 287 1.0E-99 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 R615_RS10950 21a7f8ae71bbcf9d752fb797caedcce5 292 Gene3D G3DSA:3.10.129.10 127 285 3.1E-55 T 22-04-2016 IPR029069 HotDog domain R615_RS10950 21a7f8ae71bbcf9d752fb797caedcce5 292 Gene3D G3DSA:3.10.129.10 5 117 5.4E-36 T 22-04-2016 IPR029069 HotDog domain R615_RS10950 21a7f8ae71bbcf9d752fb797caedcce5 292 Pfam PF13622 Thioesterase-like superfamily 33 283 4.2E-56 T 22-04-2016 R615_RS16585 e496f9d017775efd7ecdbd27c3a0e706 184 PANTHER PTHR37528 1 182 9.9E-20 T 22-04-2016 R615_RS16585 e496f9d017775efd7ecdbd27c3a0e706 184 Pfam PF03695 Uncharacterised protein family (UPF0149) 10 172 5.6E-27 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 R615_RS16585 e496f9d017775efd7ecdbd27c3a0e706 184 SUPERFAMILY SSF101327 7 172 1.57E-27 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 R615_RS14805 b6792d0c00951e202cdda77cfed97563 156 SUPERFAMILY SSF101307 1 149 1.31E-41 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 R615_RS14805 b6792d0c00951e202cdda77cfed97563 156 PIRSF PIRSF006162 1 156 1.3E-48 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 R615_RS14805 b6792d0c00951e202cdda77cfed97563 156 Pfam PF04608 Phosphatidylglycerophosphatase A 6 150 4.8E-48 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 R615_RS14805 b6792d0c00951e202cdda77cfed97563 156 PANTHER PTHR36305 1 156 1.7E-54 T 22-04-2016 R615_RS05905 695d389d90f940516906fb68ae0b8e26 405 PANTHER PTHR30213:SF0 10 402 2.7E-80 T 22-04-2016 R615_RS05905 695d389d90f940516906fb68ae0b8e26 405 Pfam PF03631 Virulence factor BrkB 32 272 1.5E-52 T 22-04-2016 IPR017039 Virulence factor BrkB R615_RS05905 695d389d90f940516906fb68ae0b8e26 405 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 270 2.1E-60 T 22-04-2016 IPR017039 Virulence factor BrkB R615_RS05905 695d389d90f940516906fb68ae0b8e26 405 PANTHER PTHR30213 10 402 2.7E-80 T 22-04-2016 R615_RS05905 695d389d90f940516906fb68ae0b8e26 405 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 295 20.469 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 65.29 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 PIRSF PIRSF001365 1 291 1.9E-95 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 SUPERFAMILY SSF51569 1 288 5.86E-101 T 22-04-2016 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 PANTHER PTHR12128:SF34 1 291 2.1E-135 T 22-04-2016 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 SMART SM01130 1 289 1.5E-139 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 Gene3D G3DSA:3.20.20.70 1 291 4.3E-117 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 9.3E-105 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 285 6.0E-111 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.1E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.1E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.1E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.1E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 R615_RS06860 0dd16b5d0e84e1a020d45d392ba0b303 291 PANTHER PTHR12128 1 291 2.1E-135 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 R615_RS02590 20cfd8dea9a6942d62311598c6d6b7eb 390 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 230 243 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 R615_RS02590 20cfd8dea9a6942d62311598c6d6b7eb 390 Gene3D G3DSA:3.40.640.10 45 269 7.4E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS02590 20cfd8dea9a6942d62311598c6d6b7eb 390 SUPERFAMILY SSF53383 6 385 3.67E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS02590 20cfd8dea9a6942d62311598c6d6b7eb 390 Pfam PF00155 Aminotransferase class I and II 32 380 1.7E-53 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 R615_RS02590 20cfd8dea9a6942d62311598c6d6b7eb 390 PANTHER PTHR11751:SF401 7 390 1.6E-159 T 22-04-2016 R615_RS02590 20cfd8dea9a6942d62311598c6d6b7eb 390 PANTHER PTHR11751 7 390 1.6E-159 T 22-04-2016 R615_RS02590 20cfd8dea9a6942d62311598c6d6b7eb 390 Gene3D G3DSA:3.90.1150.10 270 386 1.9E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS14475 5873ceb5200e2c04da0f601e920c6ac5 158 PANTHER PTHR30455:SF2 2 156 2.5E-72 T 22-04-2016 R615_RS14475 5873ceb5200e2c04da0f601e920c6ac5 158 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 87.666 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 R615_RS14475 5873ceb5200e2c04da0f601e920c6ac5 158 Pfam PF03477 ATP cone domain 50 136 4.2E-16 T 22-04-2016 IPR005144 ATP-cone domain R615_RS14475 5873ceb5200e2c04da0f601e920c6ac5 158 PANTHER PTHR30455 2 156 2.5E-72 T 22-04-2016 R615_RS14475 5873ceb5200e2c04da0f601e920c6ac5 158 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.6E-68 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 R615_RS14820 de5772dbc78e864d4308461e343d8442 446 SUPERFAMILY SSF52172 19 174 2.99E-33 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS14820 de5772dbc78e864d4308461e343d8442 446 Pfam PF00072 Response regulator receiver domain 21 129 2.6E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS14820 de5772dbc78e864d4308461e343d8442 446 PANTHER PTHR32071:SF39 1 344 2.9E-37 T 22-04-2016 R615_RS14820 de5772dbc78e864d4308461e343d8442 446 SMART SM00448 18 129 3.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS14820 de5772dbc78e864d4308461e343d8442 446 SUPERFAMILY SSF109604 217 374 1.02E-8 T 22-04-2016 R615_RS14820 de5772dbc78e864d4308461e343d8442 446 PANTHER PTHR32071 1 344 2.9E-37 T 22-04-2016 R615_RS14820 de5772dbc78e864d4308461e343d8442 446 Gene3D G3DSA:3.40.50.2300 19 143 4.9E-32 T 22-04-2016 R615_RS14820 de5772dbc78e864d4308461e343d8442 446 Pfam PF13487 HD domain 265 324 1.7E-10 T 22-04-2016 R615_RS14880 34fec69d7f7224c6c864bf4784c76288 89 PANTHER PTHR34702:SF1 4 89 1.1E-16 T 22-04-2016 R615_RS14880 34fec69d7f7224c6c864bf4784c76288 89 PANTHER PTHR34702 4 89 1.1E-16 T 22-04-2016 R615_RS14880 34fec69d7f7224c6c864bf4784c76288 89 PIRSF PIRSF028784 1 89 8.2E-28 T 22-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 R615_RS14880 34fec69d7f7224c6c864bf4784c76288 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 32 82 4.4E-19 T 22-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 R615_RS12050 f402257996da782652942846670e6b03 568 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 566 4.3E-147 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 R615_RS12050 f402257996da782652942846670e6b03 568 Pfam PF02272 DHHA1 domain 376 442 1.5E-14 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 R615_RS12050 f402257996da782652942846670e6b03 568 SUPERFAMILY SSF64182 44 458 6.41E-112 T 22-04-2016 R615_RS12050 f402257996da782652942846670e6b03 568 PANTHER PTHR30255 18 568 1.6E-188 T 22-04-2016 R615_RS12050 f402257996da782652942846670e6b03 568 PANTHER PTHR30255:SF2 18 568 1.6E-188 T 22-04-2016 R615_RS12050 f402257996da782652942846670e6b03 568 Pfam PF01368 DHH family 71 204 8.4E-13 T 22-04-2016 IPR001667 DDH domain R615_RS01220 a78d6cb5b5937b8303ac58457de8aef1 126 PANTHER PTHR26402 8 125 2.7E-88 T 22-04-2016 R615_RS01220 a78d6cb5b5937b8303ac58457de8aef1 126 Pfam PF00072 Response regulator receiver domain 10 121 4.5E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS01220 a78d6cb5b5937b8303ac58457de8aef1 126 PANTHER PTHR26402:SF568 8 125 2.7E-88 T 22-04-2016 R615_RS01220 a78d6cb5b5937b8303ac58457de8aef1 126 Gene3D G3DSA:3.40.50.2300 5 125 4.7E-37 T 22-04-2016 R615_RS01220 a78d6cb5b5937b8303ac58457de8aef1 126 SMART SM00448 8 121 4.8E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS01220 a78d6cb5b5937b8303ac58457de8aef1 126 SUPERFAMILY SSF52172 6 125 1.99E-36 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS01420 d006da56da8e302a0bcc8057f51dd896 344 PANTHER PTHR32338:SF8 2 344 3.3E-177 T 22-04-2016 R615_RS01420 d006da56da8e302a0bcc8057f51dd896 344 SUPERFAMILY SSF51735 2 173 5.33E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS01420 d006da56da8e302a0bcc8057f51dd896 344 Gene3D G3DSA:3.30.360.10 158 312 2.6E-59 T 22-04-2016 R615_RS01420 d006da56da8e302a0bcc8057f51dd896 344 SMART SM00859 3 141 8.9E-62 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 R615_RS01420 d006da56da8e302a0bcc8057f51dd896 344 Gene3D G3DSA:3.40.50.720 2 157 3.7E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS01420 d006da56da8e302a0bcc8057f51dd896 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 160 315 8.5E-15 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS01420 d006da56da8e302a0bcc8057f51dd896 344 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 344 4.2E-131 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS01420 d006da56da8e302a0bcc8057f51dd896 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 141 9.8E-39 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 R615_RS01420 d006da56da8e302a0bcc8057f51dd896 344 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 338 42.268 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS01420 d006da56da8e302a0bcc8057f51dd896 344 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 R615_RS01420 d006da56da8e302a0bcc8057f51dd896 344 PANTHER PTHR32338 2 344 3.3E-177 T 22-04-2016 R615_RS01420 d006da56da8e302a0bcc8057f51dd896 344 SUPERFAMILY SSF55347 149 312 1.28E-47 T 22-04-2016 R615_RS10970 ee64b5bfd500af28025e58aca63d2ae7 305 PIRSF PIRSF006232 18 298 5.7E-82 T 22-04-2016 IPR012093 Pirin R615_RS10970 ee64b5bfd500af28025e58aca63d2ae7 305 Gene3D G3DSA:2.60.120.10 25 260 1.5E-63 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS10970 ee64b5bfd500af28025e58aca63d2ae7 305 PANTHER PTHR13903 19 305 5.5E-105 T 22-04-2016 IPR012093 Pirin R615_RS10970 ee64b5bfd500af28025e58aca63d2ae7 305 SUPERFAMILY SSF51182 24 302 9.54E-74 T 22-04-2016 IPR011051 RmlC-like cupin domain R615_RS10970 ee64b5bfd500af28025e58aca63d2ae7 305 Pfam PF02678 Pirin 35 140 2.2E-32 T 22-04-2016 IPR003829 Pirin, N-terminal domain R615_RS10970 ee64b5bfd500af28025e58aca63d2ae7 305 Pfam PF05726 Pirin C-terminal cupin domain 193 289 1.8E-20 T 22-04-2016 IPR008778 Pirin, C-terminal domain R615_RS10970 ee64b5bfd500af28025e58aca63d2ae7 305 PANTHER PTHR13903:SF4 19 305 5.5E-105 T 22-04-2016 R615_RS09020 619bf01205bce70048efbaab2b64dc2a 471 Pfam PF01618 MotA/TolQ/ExbB proton channel family 344 449 4.8E-30 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 R615_RS09020 619bf01205bce70048efbaab2b64dc2a 471 PANTHER PTHR30625:SF0 31 462 1.6E-72 T 22-04-2016 R615_RS09020 619bf01205bce70048efbaab2b64dc2a 471 PANTHER PTHR30625 31 462 1.6E-72 T 22-04-2016 R615_RS09020 619bf01205bce70048efbaab2b64dc2a 471 PIRSF PIRSF037714 6 471 4.0E-136 T 22-04-2016 IPR017270 Putative MotA/TolQ/ExbB family protein R615_RS01360 9c4e3eb5eac0cfce8b3d76575a66ed52 970 SUPERFAMILY SSF81593 300 449 3.37E-42 T 22-04-2016 R615_RS01360 9c4e3eb5eac0cfce8b3d76575a66ed52 970 SUPERFAMILY SSF81301 30 298 4.96E-75 T 22-04-2016 R615_RS01360 9c4e3eb5eac0cfce8b3d76575a66ed52 970 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 38 968 18.366 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 R615_RS01360 9c4e3eb5eac0cfce8b3d76575a66ed52 970 PANTHER PTHR30621 29 955 1.1E-287 T 22-04-2016 R615_RS01360 9c4e3eb5eac0cfce8b3d76575a66ed52 970 Pfam PF08335 GlnD PII-uridylyltransferase 841 948 3.3E-8 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 R615_RS01360 9c4e3eb5eac0cfce8b3d76575a66ed52 970 Pfam PF08335 GlnD PII-uridylyltransferase 310 448 1.0E-42 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 R615_RS01360 9c4e3eb5eac0cfce8b3d76575a66ed52 970 Gene3D G3DSA:3.30.460.10 127 298 9.2E-56 T 22-04-2016 R615_RS01360 9c4e3eb5eac0cfce8b3d76575a66ed52 970 Gene3D G3DSA:3.30.460.10 653 826 8.9E-56 T 22-04-2016 R615_RS01360 9c4e3eb5eac0cfce8b3d76575a66ed52 970 SUPERFAMILY SSF81301 539 827 3.76E-80 T 22-04-2016 R615_RS01360 9c4e3eb5eac0cfce8b3d76575a66ed52 970 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 566 820 6.3E-83 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 R615_RS01360 9c4e3eb5eac0cfce8b3d76575a66ed52 970 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 41 287 5.1E-74 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 R615_RS01360 9c4e3eb5eac0cfce8b3d76575a66ed52 970 SUPERFAMILY SSF81593 833 966 5.65E-29 T 22-04-2016 R615_RS05610 31777cdf2fb08d671d8f41bf6196598e 543 PANTHER PTHR11070 4 534 2.4E-37 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 R615_RS05610 31777cdf2fb08d671d8f41bf6196598e 543 Gene3D G3DSA:3.40.50.300 254 353 9.3E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05610 31777cdf2fb08d671d8f41bf6196598e 543 Gene3D G3DSA:3.40.50.300 446 533 9.3E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05610 31777cdf2fb08d671d8f41bf6196598e 543 Gene3D G3DSA:3.40.50.300 5 103 3.3E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05610 31777cdf2fb08d671d8f41bf6196598e 543 Gene3D G3DSA:3.40.50.300 155 253 3.3E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05610 31777cdf2fb08d671d8f41bf6196598e 543 Pfam PF13361 UvrD-like helicase C-terminal domain 367 513 1.0E-14 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 R615_RS05610 31777cdf2fb08d671d8f41bf6196598e 543 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 78 2.1E-11 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 R615_RS05610 31777cdf2fb08d671d8f41bf6196598e 543 Pfam PF00580 UvrD/REP helicase N-terminal domain 166 236 3.7E-13 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 R615_RS05610 31777cdf2fb08d671d8f41bf6196598e 543 SUPERFAMILY SSF52540 4 531 1.65E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS00400 83943f209951ca8181b7b8bb7aaf314e 92 Pfam PF11191 Protein of unknown function (DUF2782) 22 92 1.4E-22 T 22-04-2016 IPR021357 Protein of unknown function DUF2782 R615_RS06920 76cc7342659748259a33f7b3e84ae606 233 Gene3D G3DSA:3.40.50.1360 5 223 4.8E-48 T 22-04-2016 R615_RS06920 76cc7342659748259a33f7b3e84ae606 233 SUPERFAMILY SSF100950 4 226 2.03E-51 T 22-04-2016 R615_RS06920 76cc7342659748259a33f7b3e84ae606 233 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 8 219 8.4E-51 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 R615_RS06920 76cc7342659748259a33f7b3e84ae606 233 PANTHER PTHR11054 6 217 2.4E-37 T 22-04-2016 R615_RS06920 76cc7342659748259a33f7b3e84ae606 233 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 6 215 1.9E-51 T 22-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 R615_RS08735 ba7301bdcaed599bb10218684ee04c58 183 SUPERFAMILY SSF46626 104 183 2.26E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS08735 ba7301bdcaed599bb10218684ee04c58 183 Gene3D G3DSA:1.10.760.10 89 183 9.3E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS08735 ba7301bdcaed599bb10218684ee04c58 183 SUPERFAMILY SSF46626 20 90 2.89E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS08735 ba7301bdcaed599bb10218684ee04c58 183 Gene3D G3DSA:1.10.760.10 28 86 3.1E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS11925 cb5e8b3b0bd9e005b850be58989b2382 206 PANTHER PTHR31573:SF1 30 204 1.1E-71 T 22-04-2016 R615_RS11925 cb5e8b3b0bd9e005b850be58989b2382 206 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 18 196 1.7E-28 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like R615_RS11925 cb5e8b3b0bd9e005b850be58989b2382 206 SUPERFAMILY SSF51197 12 198 1.02E-59 T 22-04-2016 R615_RS11925 cb5e8b3b0bd9e005b850be58989b2382 206 PANTHER PTHR31573 30 204 1.1E-71 T 22-04-2016 IPR032852 DNA oxidative demethylase ALKBH2 GO:0006281 R615_RS11925 cb5e8b3b0bd9e005b850be58989b2382 206 Gene3D G3DSA:2.60.120.590 18 200 1.1E-38 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like R615_RS11035 01f8ba1a9fe503f77c801659bf0000f7 143 Gene3D G3DSA:3.10.580.10 1 132 7.0E-27 T 22-04-2016 R615_RS11035 01f8ba1a9fe503f77c801659bf0000f7 143 SMART SM00116 84 132 0.0018 T 22-04-2016 IPR000644 CBS domain R615_RS11035 01f8ba1a9fe503f77c801659bf0000f7 143 SMART SM00116 10 57 3.0E-5 T 22-04-2016 IPR000644 CBS domain R615_RS11035 01f8ba1a9fe503f77c801659bf0000f7 143 PANTHER PTHR11911 76 133 2.1E-27 T 22-04-2016 R615_RS11035 01f8ba1a9fe503f77c801659bf0000f7 143 PANTHER PTHR11911 1 59 2.1E-27 T 22-04-2016 R615_RS11035 01f8ba1a9fe503f77c801659bf0000f7 143 SUPERFAMILY SSF54631 1 131 9.08E-30 T 22-04-2016 R615_RS11035 01f8ba1a9fe503f77c801659bf0000f7 143 Pfam PF00571 CBS domain 77 131 1.5E-12 T 22-04-2016 IPR000644 CBS domain R615_RS11035 01f8ba1a9fe503f77c801659bf0000f7 143 Pfam PF00571 CBS domain 3 55 6.2E-11 T 22-04-2016 IPR000644 CBS domain R615_RS04110 c499411ca292d5d3bd25229edc61990b 93 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 93 24.327 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 R615_RS04110 c499411ca292d5d3bd25229edc61990b 93 PANTHER PTHR36540:SF1 1 93 3.4E-39 T 22-04-2016 R615_RS04110 c499411ca292d5d3bd25229edc61990b 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 4.5E-35 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 R615_RS04110 c499411ca292d5d3bd25229edc61990b 93 PANTHER PTHR36540 1 93 3.4E-39 T 22-04-2016 R615_RS04110 c499411ca292d5d3bd25229edc61990b 93 Gene3D G3DSA:2.60.120.10 2 92 5.5E-37 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS04110 c499411ca292d5d3bd25229edc61990b 93 SUPERFAMILY SSF51182 1 92 1.56E-33 T 22-04-2016 IPR011051 RmlC-like cupin domain R615_RS00855 aefd1f2460e6d10ca7f67fd3f65828a2 127 Gene3D G3DSA:3.30.1330.40 2 122 2.0E-47 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like R615_RS00855 aefd1f2460e6d10ca7f67fd3f65828a2 127 SUPERFAMILY SSF55298 1 125 1.73E-43 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like R615_RS00855 aefd1f2460e6d10ca7f67fd3f65828a2 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 124 1.2E-50 T 22-04-2016 IPR006056 RidA family R615_RS00855 aefd1f2460e6d10ca7f67fd3f65828a2 127 Pfam PF01042 Endoribonuclease L-PSP 8 124 2.7E-40 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family R615_RS00855 aefd1f2460e6d10ca7f67fd3f65828a2 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 22-04-2016 IPR019897 RidA, conserved site R615_RS00855 aefd1f2460e6d10ca7f67fd3f65828a2 127 PANTHER PTHR11803 1 123 3.7E-50 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family R615_RS15705 de30cf9ec06afddcb3c3aabad7711745 377 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 377 1.4E-156 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 R615_RS15705 de30cf9ec06afddcb3c3aabad7711745 377 PIRSF PIRSF000267 1 375 3.0E-120 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 R615_RS15705 de30cf9ec06afddcb3c3aabad7711745 377 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 360 5.6E-106 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 R615_RS15705 de30cf9ec06afddcb3c3aabad7711745 377 PANTHER PTHR30365:SF6 1 377 4.6E-168 T 22-04-2016 R615_RS15705 de30cf9ec06afddcb3c3aabad7711745 377 PANTHER PTHR30365 1 377 4.6E-168 T 22-04-2016 R615_RS16290 faeccff91cc9a2b4c8294b1450a0c797 119 PANTHER PTHR34205 7 117 1.3E-43 T 22-04-2016 R615_RS16290 faeccff91cc9a2b4c8294b1450a0c797 119 Pfam PF06127 Protein of unknown function (DUF962) 12 106 7.6E-32 T 22-04-2016 IPR009305 Protein of unknown function DUF962 R615_RS04250 d16ee4fe2b1209bd12464223b65c62cb 590 Pfam PF08774 VRR-NUC domain 478 586 3.4E-23 T 22-04-2016 IPR014883 VRR-NUC domain GO:0016788 R615_RS04250 d16ee4fe2b1209bd12464223b65c62cb 590 PANTHER PTHR15749 18 586 4.2E-41 T 22-04-2016 IPR033315 Fanconi-associated nuclease 1-like GO:0004518|GO:0036297 R615_RS04250 d16ee4fe2b1209bd12464223b65c62cb 590 SMART SM00990 463 587 7.1E-21 T 22-04-2016 IPR014883 VRR-NUC domain GO:0016788 R615_RS02620 cc3c1c3be883949d0751e428ff794264 334 PANTHER PTHR30472 49 334 5.2E-107 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 R615_RS02620 cc3c1c3be883949d0751e428ff794264 334 Gene3D G3DSA:1.10.3470.10 13 330 2.1E-88 T 22-04-2016 IPR029022 ABC transporter, BtuC-like R615_RS02620 cc3c1c3be883949d0751e428ff794264 334 SUPERFAMILY SSF81345 12 328 9.55E-72 T 22-04-2016 IPR029022 ABC transporter, BtuC-like R615_RS02620 cc3c1c3be883949d0751e428ff794264 334 PANTHER PTHR30472:SF3 49 334 5.2E-107 T 22-04-2016 R615_RS02620 cc3c1c3be883949d0751e428ff794264 334 Pfam PF01032 FecCD transport family 26 328 5.2E-83 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 R615_RS02265 d3605e4353e243a8abfb592117dd750d 210 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 R615_RS02265 d3605e4353e243a8abfb592117dd750d 210 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 2.2E-60 T 22-04-2016 R615_RS02265 d3605e4353e243a8abfb592117dd750d 210 PANTHER PTHR11579 1 203 5.6E-78 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 R615_RS02265 d3605e4353e243a8abfb592117dd750d 210 SUPERFAMILY SSF53335 13 208 3.86E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS02265 d3605e4353e243a8abfb592117dd750d 210 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 209 1.5E-64 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 R615_RS02265 d3605e4353e243a8abfb592117dd750d 210 Gene3D G3DSA:3.40.50.150 14 206 2.6E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS02265 d3605e4353e243a8abfb592117dd750d 210 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 210 37.132 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 R615_RS01980 914a8d475f700a03c7787caad64a831e 129 PANTHER PTHR34322:SF1 1 105 4.7E-13 T 22-04-2016 R615_RS01980 914a8d475f700a03c7787caad64a831e 129 PANTHER PTHR34322 1 105 4.7E-13 T 22-04-2016 R615_RS01445 18415955ac63f831796e64541764f89d 358 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 358 38.5 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 R615_RS01445 18415955ac63f831796e64541764f89d 358 SUPERFAMILY SSF53067 140 331 2.04E-20 T 22-04-2016 R615_RS01445 18415955ac63f831796e64541764f89d 358 SUPERFAMILY SSF53067 4 37 2.04E-20 T 22-04-2016 R615_RS01445 18415955ac63f831796e64541764f89d 358 SUPERFAMILY SSF53067 64 107 2.04E-20 T 22-04-2016 R615_RS01445 18415955ac63f831796e64541764f89d 358 PANTHER PTHR30605:SF0 1 356 1.7E-138 T 22-04-2016 R615_RS01445 18415955ac63f831796e64541764f89d 358 Gene3D G3DSA:3.30.420.40 2 190 1.9E-64 T 22-04-2016 R615_RS01445 18415955ac63f831796e64541764f89d 358 PANTHER PTHR30605 1 356 1.7E-138 T 22-04-2016 R615_RS01445 18415955ac63f831796e64541764f89d 358 Pfam PF03702 Uncharacterised protein family (UPF0075) 4 357 5.4E-130 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 R615_RS12335 4007126508b57652cb6d15798534ed04 272 PANTHER PTHR41542 1 272 4.1E-43 T 22-04-2016 R615_RS12335 4007126508b57652cb6d15798534ed04 272 Pfam PF04280 Tim44-like domain 150 270 2.4E-11 T 22-04-2016 IPR007379 Tim44-like domain R615_RS12335 4007126508b57652cb6d15798534ed04 272 PANTHER PTHR41542:SF1 1 272 4.1E-43 T 22-04-2016 R615_RS12335 4007126508b57652cb6d15798534ed04 272 SUPERFAMILY SSF54427 146 270 7.45E-15 T 22-04-2016 IPR032710 NTF2-like domain R615_RS12335 4007126508b57652cb6d15798534ed04 272 SMART SM00978 140 271 1.6E-26 T 22-04-2016 IPR007379 Tim44-like domain R615_RS09185 87119ef33dc05c70b7bb229c5101a418 312 Pfam PF00561 alpha/beta hydrolase fold 56 177 6.8E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS09185 87119ef33dc05c70b7bb229c5101a418 312 SUPERFAMILY SSF53474 51 310 3.71E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS09185 87119ef33dc05c70b7bb229c5101a418 312 Gene3D G3DSA:3.40.50.1820 39 309 2.5E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS09185 87119ef33dc05c70b7bb229c5101a418 312 PANTHER PTHR11005 51 162 1.2E-20 T 22-04-2016 R615_RS04095 007e2fe4c2873a31d43bfcee8723ccee 241 PANTHER PTHR11922 1 240 4.0E-36 T 22-04-2016 R615_RS04095 007e2fe4c2873a31d43bfcee8723ccee 241 SUPERFAMILY SSF52317 23 206 1.86E-37 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS04095 007e2fe4c2873a31d43bfcee8723ccee 241 PANTHER PTHR11922:SF34 1 240 4.0E-36 T 22-04-2016 R615_RS04095 007e2fe4c2873a31d43bfcee8723ccee 241 Pfam PF00117 Glutamine amidotransferase class-I 58 194 3.8E-11 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 R615_RS04095 007e2fe4c2873a31d43bfcee8723ccee 241 Gene3D G3DSA:3.40.50.880 36 211 1.6E-38 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS01255 6dd8d32c8b5f30392f257996a68fd87b 106 SUPERFAMILY SSF50341 1 96 2.09E-7 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS01255 6dd8d32c8b5f30392f257996a68fd87b 106 Pfam PF01584 CheW-like domain 2 98 3.6E-8 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS09655 417d6c6f279db4975a421b8e38559dae 1048 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1004 1047 3.2E-19 T 22-04-2016 IPR020011 Motility protein FimV, C-terminal R615_RS09655 417d6c6f279db4975a421b8e38559dae 1048 Gene3D G3DSA:3.10.350.10 179 235 3.8E-4 T 22-04-2016 IPR018392 LysM domain R615_RS09655 417d6c6f279db4975a421b8e38559dae 1048 Gene3D G3DSA:1.25.40.10 1004 1034 1.5E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09655 417d6c6f279db4975a421b8e38559dae 1048 Gene3D G3DSA:1.25.40.10 580 621 1.5E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09655 417d6c6f279db4975a421b8e38559dae 1048 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 186 258 4.3E-28 T 22-04-2016 IPR020012 Motility protein FimV, N-terminal R615_RS10880 78c2d87ed91346ad9482cd1d11543499 220 PANTHER PTHR23026:SF90 1 218 9.1E-43 T 22-04-2016 R615_RS10880 78c2d87ed91346ad9482cd1d11543499 220 Pfam PF00881 Nitroreductase family 8 195 1.5E-28 T 22-04-2016 IPR029479 Nitroreductase R615_RS10880 78c2d87ed91346ad9482cd1d11543499 220 PANTHER PTHR23026 1 218 9.1E-43 T 22-04-2016 R615_RS10880 78c2d87ed91346ad9482cd1d11543499 220 Gene3D G3DSA:3.40.109.10 121 216 2.6E-46 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 R615_RS10880 78c2d87ed91346ad9482cd1d11543499 220 Gene3D G3DSA:3.40.109.10 1 78 2.6E-46 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 R615_RS10880 78c2d87ed91346ad9482cd1d11543499 220 SUPERFAMILY SSF55469 1 62 1.83E-43 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 R615_RS10880 78c2d87ed91346ad9482cd1d11543499 220 SUPERFAMILY SSF55469 121 218 1.83E-43 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 R615_RS09715 99c3c482e807688e16455e84e04731d1 154 Gene3D G3DSA:3.40.50.360 2 149 4.2E-22 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS09715 99c3c482e807688e16455e84e04731d1 154 SUPERFAMILY SSF52218 3 148 5.94E-20 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS08535 ca28b770abdd70ed53af74c24e72bab8 310 Gene3D G3DSA:3.40.800.20 3 302 2.0E-92 T 22-04-2016 IPR023801 Histone deacetylase domain R615_RS08535 ca28b770abdd70ed53af74c24e72bab8 310 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 1.9E-14 T 22-04-2016 IPR000286 Histone deacetylase superfamily R615_RS08535 ca28b770abdd70ed53af74c24e72bab8 310 PRINTS PR01270 Histone deacetylase superfamily signature 235 245 1.9E-14 T 22-04-2016 IPR000286 Histone deacetylase superfamily R615_RS08535 ca28b770abdd70ed53af74c24e72bab8 310 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 1.9E-14 T 22-04-2016 IPR000286 Histone deacetylase superfamily R615_RS08535 ca28b770abdd70ed53af74c24e72bab8 310 SUPERFAMILY SSF52768 1 304 5.76E-94 T 22-04-2016 R615_RS08535 ca28b770abdd70ed53af74c24e72bab8 310 PANTHER PTHR10625 17 303 1.4E-80 T 22-04-2016 IPR000286 Histone deacetylase superfamily R615_RS08535 ca28b770abdd70ed53af74c24e72bab8 310 PANTHER PTHR10625:SF104 17 303 1.4E-80 T 22-04-2016 R615_RS08535 ca28b770abdd70ed53af74c24e72bab8 310 Pfam PF00850 Histone deacetylase domain 20 302 3.6E-74 T 22-04-2016 IPR023801 Histone deacetylase domain R615_RS05220 213146265b611b1bc63cafbd2b7d6909 516 PANTHER PTHR32089 46 516 3.1E-81 T 22-04-2016 R615_RS05220 213146265b611b1bc63cafbd2b7d6909 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 299 493 3.2E-40 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS05220 213146265b611b1bc63cafbd2b7d6909 516 Gene3D G3DSA:3.30.450.20 21 112 2.6E-20 T 22-04-2016 R615_RS05220 213146265b611b1bc63cafbd2b7d6909 516 PANTHER PTHR32089:SF44 46 516 3.1E-81 T 22-04-2016 R615_RS05220 213146265b611b1bc63cafbd2b7d6909 516 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 111 3.5E-12 T 22-04-2016 IPR000014 PAS domain R615_RS05220 213146265b611b1bc63cafbd2b7d6909 516 Gene3D G3DSA:1.10.287.950 266 483 2.0E-50 T 22-04-2016 R615_RS05220 213146265b611b1bc63cafbd2b7d6909 516 SMART SM00283 252 513 5.1E-52 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS05220 213146265b611b1bc63cafbd2b7d6909 516 SUPERFAMILY SSF58104 258 514 1.12E-60 T 22-04-2016 R615_RS05220 213146265b611b1bc63cafbd2b7d6909 516 SUPERFAMILY SSF55785 21 114 1.47E-24 T 22-04-2016 IPR000014 PAS domain R615_RS05220 213146265b611b1bc63cafbd2b7d6909 516 Pfam PF08447 PAS fold 31 114 2.5E-15 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 R615_RS05075 25a0f06dfd6867b42eb0655f3f556f1f 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 86 3.3E-27 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 R615_RS05075 25a0f06dfd6867b42eb0655f3f556f1f 89 PANTHER PTHR34040 1 89 1.5E-36 T 22-04-2016 R615_RS05075 25a0f06dfd6867b42eb0655f3f556f1f 89 Pfam PF01313 Bacterial export proteins, family 3 8 78 4.1E-27 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 R615_RS05075 25a0f06dfd6867b42eb0655f3f556f1f 89 PANTHER PTHR34040:SF2 1 89 1.5E-36 T 22-04-2016 R615_RS05075 25a0f06dfd6867b42eb0655f3f556f1f 89 PIRSF PIRSF004669 1 89 1.6E-28 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 R615_RS05075 25a0f06dfd6867b42eb0655f3f556f1f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.4E-16 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 R615_RS05075 25a0f06dfd6867b42eb0655f3f556f1f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.4E-16 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 R615_RS05075 25a0f06dfd6867b42eb0655f3f556f1f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.4E-16 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 R615_RS02110 ad649324954ba2a5406402da00b0bca6 270 PANTHER PTHR24220:SF368 9 266 5.8E-152 T 22-04-2016 R615_RS02110 ad649324954ba2a5406402da00b0bca6 270 SMART SM00382 32 225 1.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS02110 ad649324954ba2a5406402da00b0bca6 270 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS02110 ad649324954ba2a5406402da00b0bca6 270 SUPERFAMILY SSF52540 6 235 1.08E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS02110 ad649324954ba2a5406402da00b0bca6 270 Pfam PF00005 ABC transporter 23 172 1.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS02110 ad649324954ba2a5406402da00b0bca6 270 PANTHER PTHR24220 9 266 5.8E-152 T 22-04-2016 R615_RS02110 ad649324954ba2a5406402da00b0bca6 270 Gene3D G3DSA:3.40.50.300 4 238 6.4E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11340 bbf68102c5e884e9ee66e1a65b9ae769 184 SUPERFAMILY SSF52218 1 182 6.42E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS11340 bbf68102c5e884e9ee66e1a65b9ae769 184 Pfam PF03358 NADPH-dependent FMN reductase 36 113 1.8E-10 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 R615_RS11340 bbf68102c5e884e9ee66e1a65b9ae769 184 PANTHER PTHR30546 1 182 8.7E-28 T 22-04-2016 R615_RS11340 bbf68102c5e884e9ee66e1a65b9ae769 184 PANTHER PTHR30546:SF0 1 182 8.7E-28 T 22-04-2016 R615_RS11340 bbf68102c5e884e9ee66e1a65b9ae769 184 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 R615_RS11340 bbf68102c5e884e9ee66e1a65b9ae769 184 Gene3D G3DSA:3.40.50.360 1 182 1.8E-59 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS00175 434b72154d9f3629828f1fdbacbf9e02 302 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 1 301 39.743 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 R615_RS00175 434b72154d9f3629828f1fdbacbf9e02 302 PIRSF PIRSF026649 1 298 2.7E-93 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 R615_RS00175 434b72154d9f3629828f1fdbacbf9e02 302 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 289 8.7E-76 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 R615_RS00175 434b72154d9f3629828f1fdbacbf9e02 302 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 3 296 1.6E-95 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 R615_RS00175 434b72154d9f3629828f1fdbacbf9e02 302 PANTHER PTHR30606 1 296 1.5E-104 T 22-04-2016 R615_RS00175 434b72154d9f3629828f1fdbacbf9e02 302 PANTHER PTHR30606:SF5 1 296 1.5E-104 T 22-04-2016 R615_RS11080 b7eead1564b386567901a264ef5f0c03 251 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 3.9E-42 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 R615_RS11080 b7eead1564b386567901a264ef5f0c03 251 PANTHER PTHR30269:SF0 3 247 1.0E-76 T 22-04-2016 R615_RS11080 b7eead1564b386567901a264ef5f0c03 251 PANTHER PTHR30269 3 247 1.0E-76 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 R615_RS11780 23fc3384d9ffc0b92c0da28c89fa3d58 411 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 1 116 1.1E-13 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI R615_RS11780 23fc3384d9ffc0b92c0da28c89fa3d58 411 SUPERFAMILY SSF48452 149 260 1.02E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS11780 23fc3384d9ffc0b92c0da28c89fa3d58 411 Gene3D G3DSA:1.25.40.10 122 192 1.9E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS11780 23fc3384d9ffc0b92c0da28c89fa3d58 411 Gene3D G3DSA:1.25.40.10 194 281 7.7E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS13045 fc8da1360966e1d61f587bd9812000ec 281 PANTHER PTHR22777:SF17 13 278 2.7E-102 T 22-04-2016 R615_RS13045 fc8da1360966e1d61f587bd9812000ec 281 SMART SM00116 136 184 0.33 T 22-04-2016 IPR000644 CBS domain R615_RS13045 fc8da1360966e1d61f587bd9812000ec 281 SMART SM00116 72 121 8.1 T 22-04-2016 IPR000644 CBS domain R615_RS13045 fc8da1360966e1d61f587bd9812000ec 281 Pfam PF03471 Transporter associated domain 202 277 3.7E-18 T 22-04-2016 IPR005170 Transporter-associated domain R615_RS13045 fc8da1360966e1d61f587bd9812000ec 281 Gene3D G3DSA:3.10.580.10 52 191 7.6E-21 T 22-04-2016 R615_RS13045 fc8da1360966e1d61f587bd9812000ec 281 PANTHER PTHR22777 13 278 2.7E-102 T 22-04-2016 R615_RS13045 fc8da1360966e1d61f587bd9812000ec 281 SMART SM01091 201 279 1.6E-23 T 22-04-2016 IPR005170 Transporter-associated domain R615_RS13045 fc8da1360966e1d61f587bd9812000ec 281 SUPERFAMILY SSF54631 59 196 4.93E-33 T 22-04-2016 R615_RS13045 fc8da1360966e1d61f587bd9812000ec 281 SUPERFAMILY SSF56176 199 279 1.55E-20 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 R615_RS13045 fc8da1360966e1d61f587bd9812000ec 281 Gene3D G3DSA:3.30.465.10 192 277 2.3E-24 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 R615_RS13045 fc8da1360966e1d61f587bd9812000ec 281 Pfam PF00571 CBS domain 63 117 1.8E-5 T 22-04-2016 IPR000644 CBS domain R615_RS13045 fc8da1360966e1d61f587bd9812000ec 281 Pfam PF00571 CBS domain 137 184 1.0E-4 T 22-04-2016 IPR000644 CBS domain R615_RS14950 94a46b9081be2235c2d0b26da066ac74 212 PANTHER PTHR39555:SF1 16 209 1.1E-44 T 22-04-2016 R615_RS14950 94a46b9081be2235c2d0b26da066ac74 212 Gene3D G3DSA:1.10.287.540 75 109 9.5E-16 T 22-04-2016 IPR023218 UPF0291 structural domain R615_RS14950 94a46b9081be2235c2d0b26da066ac74 212 Pfam PF04350 Pilus assembly protein, PilO 65 205 2.7E-51 T 22-04-2016 IPR007445 Pilus assembly protein, PilO R615_RS14950 94a46b9081be2235c2d0b26da066ac74 212 PANTHER PTHR39555 16 209 1.1E-44 T 22-04-2016 R615_RS14950 94a46b9081be2235c2d0b26da066ac74 212 PIRSF PIRSF016482 10 211 4.9E-60 T 22-04-2016 IPR007445 Pilus assembly protein, PilO R615_RS14950 94a46b9081be2235c2d0b26da066ac74 212 Gene3D G3DSA:3.30.70.60 110 210 3.6E-35 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 R615_RS14930 4f6dc734b4b84c080e9605d3d5f5a124 363 PIRSF PIRSF001455 5 360 7.1E-107 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 R615_RS14930 4f6dc734b4b84c080e9605d3d5f5a124 363 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 7.2E-116 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 R615_RS14930 4f6dc734b4b84c080e9605d3d5f5a124 363 Pfam PF01761 3-dehydroquinate synthase 65 323 1.5E-104 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 R615_RS14930 4f6dc734b4b84c080e9605d3d5f5a124 363 Gene3D G3DSA:1.20.1090.10 171 355 6.9E-61 T 22-04-2016 R615_RS14930 4f6dc734b4b84c080e9605d3d5f5a124 363 PANTHER PTHR21090 1 359 3.5E-193 T 22-04-2016 R615_RS14930 4f6dc734b4b84c080e9605d3d5f5a124 363 Gene3D G3DSA:3.40.50.1970 2 170 5.4E-68 T 22-04-2016 R615_RS14930 4f6dc734b4b84c080e9605d3d5f5a124 363 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 356 42.744 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 R615_RS14930 4f6dc734b4b84c080e9605d3d5f5a124 363 SUPERFAMILY SSF56796 4 355 1.03E-114 T 22-04-2016 R615_RS14195 ec3e7ab218e0f3d8469eb8242234bfb7 117 Gene3D G3DSA:3.30.1130.10 1 114 6.4E-38 T 22-04-2016 R615_RS14195 ec3e7ab218e0f3d8469eb8242234bfb7 117 SMART SM00905 4 114 6.6E-41 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS14195 ec3e7ab218e0f3d8469eb8242234bfb7 117 SUPERFAMILY SSF55620 1 114 7.23E-33 T 22-04-2016 R615_RS14195 ec3e7ab218e0f3d8469eb8242234bfb7 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 1.7E-28 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS14195 ec3e7ab218e0f3d8469eb8242234bfb7 117 PANTHER PTHR20941 1 115 1.9E-24 T 22-04-2016 R615_RS14195 ec3e7ab218e0f3d8469eb8242234bfb7 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 1.0E-24 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS14195 ec3e7ab218e0f3d8469eb8242234bfb7 117 Pfam PF02152 Dihydroneopterin aldolase 4 112 3.9E-30 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS02995 020d6c06801ee687f358854a67fad055 375 PANTHER PTHR13847:SF206 5 371 1.1E-112 T 22-04-2016 R615_RS02995 020d6c06801ee687f358854a67fad055 375 Gene3D G3DSA:3.30.9.10 87 140 2.6E-4 T 22-04-2016 R615_RS02995 020d6c06801ee687f358854a67fad055 375 Gene3D G3DSA:3.30.9.10 305 316 2.6E-4 T 22-04-2016 R615_RS02995 020d6c06801ee687f358854a67fad055 375 PANTHER PTHR13847 5 371 1.1E-112 T 22-04-2016 R615_RS02995 020d6c06801ee687f358854a67fad055 375 SUPERFAMILY SSF51905 5 220 1.73E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS02995 020d6c06801ee687f358854a67fad055 375 SUPERFAMILY SSF51905 331 372 1.73E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS02995 020d6c06801ee687f358854a67fad055 375 Gene3D G3DSA:3.50.50.60 5 85 6.3E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS02995 020d6c06801ee687f358854a67fad055 375 Gene3D G3DSA:3.50.50.60 141 219 6.3E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS02995 020d6c06801ee687f358854a67fad055 375 Gene3D G3DSA:3.50.50.60 329 372 6.3E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS02995 020d6c06801ee687f358854a67fad055 375 Pfam PF01266 FAD dependent oxidoreductase 7 370 7.7E-63 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 R615_RS17060 42d27855cb66c2ee9663f9c86961f378 293 SUPERFAMILY SSF53850 94 289 2.56E-24 T 22-04-2016 R615_RS17060 42d27855cb66c2ee9663f9c86961f378 293 Gene3D G3DSA:3.40.190.10 200 257 2.2E-6 T 22-04-2016 R615_RS17060 42d27855cb66c2ee9663f9c86961f378 293 PANTHER PTHR30126 4 288 3.0E-93 T 22-04-2016 R615_RS17060 42d27855cb66c2ee9663f9c86961f378 293 Pfam PF03466 LysR substrate binding domain 94 288 1.4E-21 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS17060 42d27855cb66c2ee9663f9c86961f378 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.4E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS17060 42d27855cb66c2ee9663f9c86961f378 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.4E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS17060 42d27855cb66c2ee9663f9c86961f378 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.4E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS17060 42d27855cb66c2ee9663f9c86961f378 293 SUPERFAMILY SSF46785 3 112 4.27E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS17060 42d27855cb66c2ee9663f9c86961f378 293 PANTHER PTHR30126:SF23 4 288 3.0E-93 T 22-04-2016 R615_RS17060 42d27855cb66c2ee9663f9c86961f378 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.5E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS17060 42d27855cb66c2ee9663f9c86961f378 293 Gene3D G3DSA:1.10.10.10 4 83 1.5E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS17060 42d27855cb66c2ee9663f9c86961f378 293 Gene3D G3DSA:3.40.190.10 94 199 1.9E-11 T 22-04-2016 R615_RS07935 6d0babfa28b365e24e5cf4471680e59a 335 Gene3D G3DSA:3.90.25.10 184 334 7.5E-29 T 22-04-2016 R615_RS07935 6d0babfa28b365e24e5cf4471680e59a 335 SUPERFAMILY SSF51735 2 333 4.33E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07935 6d0babfa28b365e24e5cf4471680e59a 335 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 5.9E-25 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 R615_RS07935 6d0babfa28b365e24e5cf4471680e59a 335 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 5.9E-25 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 R615_RS07935 6d0babfa28b365e24e5cf4471680e59a 335 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 5.9E-25 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 R615_RS07935 6d0babfa28b365e24e5cf4471680e59a 335 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 5.9E-25 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 R615_RS07935 6d0babfa28b365e24e5cf4471680e59a 335 PANTHER PTHR10366 2 233 7.5E-177 T 22-04-2016 R615_RS07935 6d0babfa28b365e24e5cf4471680e59a 335 PANTHER PTHR10366 251 335 7.5E-177 T 22-04-2016 R615_RS07935 6d0babfa28b365e24e5cf4471680e59a 335 Gene3D G3DSA:3.40.50.720 2 183 4.3E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07935 6d0babfa28b365e24e5cf4471680e59a 335 PANTHER PTHR10366:SF77 2 233 7.5E-177 T 22-04-2016 R615_RS07935 6d0babfa28b365e24e5cf4471680e59a 335 PANTHER PTHR10366:SF77 251 335 7.5E-177 T 22-04-2016 R615_RS07935 6d0babfa28b365e24e5cf4471680e59a 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 262 4.0E-57 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 R615_RS05005 95b2b06720c033a923a71acefa1c2e3d 169 SUPERFAMILY SSF50341 15 157 6.67E-39 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS05005 95b2b06720c033a923a71acefa1c2e3d 169 Pfam PF01584 CheW-like domain 19 157 2.1E-34 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS05005 95b2b06720c033a923a71acefa1c2e3d 169 Gene3D G3DSA:2.30.30.40 104 150 6.1E-7 T 22-04-2016 R615_RS05005 95b2b06720c033a923a71acefa1c2e3d 169 Gene3D G3DSA:2.40.50.180 57 103 4.8E-10 T 22-04-2016 R615_RS05005 95b2b06720c033a923a71acefa1c2e3d 169 PANTHER PTHR22617 18 169 9.1E-43 T 22-04-2016 R615_RS05005 95b2b06720c033a923a71acefa1c2e3d 169 SMART SM00260 15 156 9.2E-39 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 R615_RS04795 f0a6f96e88416952ab5b89cf639d6379 101 Gene3D G3DSA:3.30.460.10 6 101 1.4E-22 T 22-04-2016 R615_RS04795 f0a6f96e88416952ab5b89cf639d6379 101 Pfam PF01909 Nucleotidyltransferase domain 15 86 3.2E-10 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 R615_RS04795 f0a6f96e88416952ab5b89cf639d6379 101 SUPERFAMILY SSF81301 14 97 3.51E-17 T 22-04-2016 R615_RS10480 e942a4b6fbd63113efa32f5c446d1a6a 192 PANTHER PTHR12992 4 182 4.2E-47 T 22-04-2016 R615_RS10480 e942a4b6fbd63113efa32f5c446d1a6a 192 Gene3D G3DSA:3.90.79.10 20 179 7.3E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS10480 e942a4b6fbd63113efa32f5c446d1a6a 192 Pfam PF00293 NUDIX domain 31 106 1.7E-9 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 R615_RS10480 e942a4b6fbd63113efa32f5c446d1a6a 192 SUPERFAMILY SSF55811 30 174 3.11E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS13675 ed8e170639fd21daf5f4c0ac3b567793 409 Pfam PF00482 Type II secretion system (T2SS), protein F 75 198 4.6E-32 T 22-04-2016 IPR018076 Type II secretion system F domain R615_RS13675 ed8e170639fd21daf5f4c0ac3b567793 409 Pfam PF00482 Type II secretion system (T2SS), protein F 280 401 3.9E-30 T 22-04-2016 IPR018076 Type II secretion system F domain R615_RS13675 ed8e170639fd21daf5f4c0ac3b567793 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 170 198 2.8E-19 T 22-04-2016 IPR003004 GspF/PilC family R615_RS13675 ed8e170639fd21daf5f4c0ac3b567793 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 374 388 2.8E-19 T 22-04-2016 IPR003004 GspF/PilC family R615_RS13675 ed8e170639fd21daf5f4c0ac3b567793 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 390 409 2.8E-19 T 22-04-2016 IPR003004 GspF/PilC family R615_RS13675 ed8e170639fd21daf5f4c0ac3b567793 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 71 83 2.8E-19 T 22-04-2016 IPR003004 GspF/PilC family R615_RS13675 ed8e170639fd21daf5f4c0ac3b567793 409 PANTHER PTHR30012:SF0 8 409 1.4E-152 T 22-04-2016 R615_RS13675 ed8e170639fd21daf5f4c0ac3b567793 409 PANTHER PTHR30012 8 409 1.4E-152 T 22-04-2016 R615_RS01565 fdef7417676a805ecd54fad9a3b0051b 88 SUPERFAMILY SSF111148 1 88 1.18E-36 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 R615_RS01565 fdef7417676a805ecd54fad9a3b0051b 88 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 73 3.0E-23 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 R615_RS01565 fdef7417676a805ecd54fad9a3b0051b 88 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 4.2E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 R615_RS01565 fdef7417676a805ecd54fad9a3b0051b 88 PANTHER PTHR36965:SF1 2 88 6.8E-39 T 22-04-2016 R615_RS01565 fdef7417676a805ecd54fad9a3b0051b 88 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 25.357 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 R615_RS01565 fdef7417676a805ecd54fad9a3b0051b 88 PIRSF PIRSF029827 1 88 1.8E-36 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 R615_RS01565 fdef7417676a805ecd54fad9a3b0051b 88 Gene3D G3DSA:1.10.3880.10 1 88 6.3E-37 T 22-04-2016 R615_RS01565 fdef7417676a805ecd54fad9a3b0051b 88 PANTHER PTHR36965 2 88 6.8E-39 T 22-04-2016 R615_RS04280 c66cd8167445759be8899c4ee9ad4e69 181 PANTHER PTHR10204 1 175 1.7E-61 T 22-04-2016 R615_RS04280 c66cd8167445759be8899c4ee9ad4e69 181 PANTHER PTHR10204:SF42 1 175 1.7E-61 T 22-04-2016 R615_RS04280 c66cd8167445759be8899c4ee9ad4e69 181 SUPERFAMILY SSF52218 1 175 4.0E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS04280 c66cd8167445759be8899c4ee9ad4e69 181 Gene3D G3DSA:3.40.50.360 1 174 1.1E-43 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS04280 c66cd8167445759be8899c4ee9ad4e69 181 Pfam PF02525 Flavodoxin-like fold 3 170 3.1E-37 T 22-04-2016 IPR003680 Flavodoxin-like fold R615_RS03680 65e8a3edcd119a5351d74f507e54a50c 366 Gene3D G3DSA:3.40.50.300 17 228 1.4E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03680 65e8a3edcd119a5351d74f507e54a50c 366 SUPERFAMILY SSF50331 245 364 3.89E-11 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal R615_RS03680 65e8a3edcd119a5351d74f507e54a50c 366 Pfam PF00005 ABC transporter 19 168 6.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS03680 65e8a3edcd119a5351d74f507e54a50c 366 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 5 364 1.8E-102 T 22-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 R615_RS03680 65e8a3edcd119a5351d74f507e54a50c 366 PANTHER PTHR24220 3 237 5.5E-79 T 22-04-2016 R615_RS03680 65e8a3edcd119a5351d74f507e54a50c 366 SUPERFAMILY SSF52540 9 229 2.77E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03680 65e8a3edcd119a5351d74f507e54a50c 366 PANTHER PTHR24220:SF284 3 237 5.5E-79 T 22-04-2016 R615_RS03680 65e8a3edcd119a5351d74f507e54a50c 366 SMART SM00382 26 217 1.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS03680 65e8a3edcd119a5351d74f507e54a50c 366 Gene3D G3DSA:2.40.50.100 288 362 6.3E-11 T 22-04-2016 R615_RS03680 65e8a3edcd119a5351d74f507e54a50c 366 Pfam PF03459 TOBE domain 320 364 4.3E-7 T 22-04-2016 IPR005116 Transport-associated OB, type 1 R615_RS03680 65e8a3edcd119a5351d74f507e54a50c 366 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS02860 de0f58b641ebea89d87241029e9ea417 298 Pfam PF02321 Outer membrane efflux protein 113 282 1.2E-12 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS02860 de0f58b641ebea89d87241029e9ea417 298 SUPERFAMILY SSF56954 3 288 2.09E-28 T 22-04-2016 R615_RS02860 de0f58b641ebea89d87241029e9ea417 298 Gene3D G3DSA:1.20.1600.10 3 288 1.8E-24 T 22-04-2016 R615_RS12730 9bf9397d48748677c90a94e12ccf8d8c 477 PANTHER PTHR34595:SF3 1 475 2.6E-299 T 22-04-2016 R615_RS12730 9bf9397d48748677c90a94e12ccf8d8c 477 PIRSF PIRSF005522 1 476 6.2E-233 T 22-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 R615_RS12730 9bf9397d48748677c90a94e12ccf8d8c 477 SUPERFAMILY SSF56059 19 215 1.83E-65 T 22-04-2016 R615_RS12730 9bf9397d48748677c90a94e12ccf8d8c 477 SUPERFAMILY SSF56059 320 465 1.83E-65 T 22-04-2016 R615_RS12730 9bf9397d48748677c90a94e12ccf8d8c 477 Pfam PF14403 Circularly permuted ATP-grasp type 2 77 450 7.3E-161 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 R615_RS12730 9bf9397d48748677c90a94e12ccf8d8c 477 PANTHER PTHR34595 1 475 2.6E-299 T 22-04-2016 R615_RS17735 3258840b5fb2ca55517bf6f9d95d3d93 591 PANTHER PTHR41533:SF1 293 584 2.2E-88 T 22-04-2016 R615_RS17735 3258840b5fb2ca55517bf6f9d95d3d93 591 PANTHER PTHR41533:SF1 48 273 2.2E-88 T 22-04-2016 R615_RS17735 3258840b5fb2ca55517bf6f9d95d3d93 591 Gene3D G3DSA:2.40.440.10 351 398 6.9E-9 T 22-04-2016 R615_RS17735 3258840b5fb2ca55517bf6f9d95d3d93 591 Gene3D G3DSA:2.40.440.10 466 514 6.9E-9 T 22-04-2016 R615_RS17735 3258840b5fb2ca55517bf6f9d95d3d93 591 SUPERFAMILY SSF47090 287 329 1.22E-6 T 22-04-2016 IPR002477 Peptidoglycan binding-like R615_RS17735 3258840b5fb2ca55517bf6f9d95d3d93 591 Pfam PF03734 L,D-transpeptidase catalytic domain 354 524 1.5E-26 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 R615_RS17735 3258840b5fb2ca55517bf6f9d95d3d93 591 PANTHER PTHR41533 293 584 2.2E-88 T 22-04-2016 R615_RS17735 3258840b5fb2ca55517bf6f9d95d3d93 591 PANTHER PTHR41533 48 273 2.2E-88 T 22-04-2016 R615_RS17735 3258840b5fb2ca55517bf6f9d95d3d93 591 Gene3D G3DSA:1.10.101.10 241 334 7.2E-7 T 22-04-2016 IPR002477 Peptidoglycan binding-like R615_RS17735 3258840b5fb2ca55517bf6f9d95d3d93 591 Pfam PF01471 Putative peptidoglycan binding domain 295 323 3.7E-6 T 22-04-2016 IPR002477 Peptidoglycan binding-like R615_RS17735 3258840b5fb2ca55517bf6f9d95d3d93 591 SUPERFAMILY SSF141523 464 513 3.01E-15 T 22-04-2016 R615_RS17735 3258840b5fb2ca55517bf6f9d95d3d93 591 SUPERFAMILY SSF141523 351 407 3.01E-15 T 22-04-2016 R615_RS04625 39fa0006f4b101ba706aac1067e30a70 262 Pfam PF13860 FlgD Ig-like domain 110 161 9.3E-9 T 22-04-2016 IPR025965 FlgD Ig-like domain R615_RS04625 39fa0006f4b101ba706aac1067e30a70 262 PANTHER PTHR30435:SF15 1 159 4.9E-36 T 22-04-2016 R615_RS04625 39fa0006f4b101ba706aac1067e30a70 262 PANTHER PTHR30435 1 159 4.9E-36 T 22-04-2016 R615_RS04625 39fa0006f4b101ba706aac1067e30a70 262 Pfam PF13861 FlgD Tudor-like domain 87 257 1.3E-14 T 22-04-2016 IPR025963 FlgD Tudor-like domain R615_RS04625 39fa0006f4b101ba706aac1067e30a70 262 Pfam PF03963 Flagellar hook capping protein - N-terminal region 8 77 1.3E-20 T 22-04-2016 IPR005648 Flagellar hook capping protein R615_RS12425 faa731dbb2a4550bb13c04acc08ca378 163 Pfam PF00313 'Cold-shock' DNA-binding domain 99 161 2.1E-26 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 R615_RS12425 faa731dbb2a4550bb13c04acc08ca378 163 ProSitePatterns PS00352 'Cold-shock' domain signature. 111 129 - T 22-04-2016 IPR019844 Cold-shock conserved site R615_RS12425 faa731dbb2a4550bb13c04acc08ca378 163 SMART SM00357 99 162 3.4E-25 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 R615_RS12425 faa731dbb2a4550bb13c04acc08ca378 163 PANTHER PTHR11544 96 162 1.1E-27 T 22-04-2016 R615_RS12425 faa731dbb2a4550bb13c04acc08ca378 163 PRINTS PR00050 Cold shock protein signature 120 129 2.1E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 R615_RS12425 faa731dbb2a4550bb13c04acc08ca378 163 PRINTS PR00050 Cold shock protein signature 100 115 2.1E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 R615_RS12425 faa731dbb2a4550bb13c04acc08ca378 163 PRINTS PR00050 Cold shock protein signature 135 153 2.1E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 R615_RS12425 faa731dbb2a4550bb13c04acc08ca378 163 Gene3D G3DSA:2.40.50.140 99 160 7.2E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS12425 faa731dbb2a4550bb13c04acc08ca378 163 SUPERFAMILY SSF50249 97 161 2.01E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS04360 63e34465c8e5a2e0ced8ac3879dfcdc9 241 PIRSF PIRSF000857 7 241 1.7E-56 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 R615_RS04360 63e34465c8e5a2e0ced8ac3879dfcdc9 241 PANTHER PTHR23293:SF5 27 240 6.7E-50 T 22-04-2016 R615_RS04360 63e34465c8e5a2e0ced8ac3879dfcdc9 241 Gene3D G3DSA:3.40.50.620 23 216 5.5E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS04360 63e34465c8e5a2e0ced8ac3879dfcdc9 241 PANTHER PTHR23293 27 240 6.7E-50 T 22-04-2016 R615_RS04360 63e34465c8e5a2e0ced8ac3879dfcdc9 241 SUPERFAMILY SSF52402 28 209 1.05E-36 T 22-04-2016 R615_RS04360 63e34465c8e5a2e0ced8ac3879dfcdc9 241 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 55 220 2.9E-27 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 R615_RS03775 5e278e235245c31db1e45e053dfa7864 367 PIRSF PIRSF015268 13 356 4.8E-135 T 22-04-2016 IPR011204 Virulence protein RhuM-like R615_RS03775 5e278e235245c31db1e45e053dfa7864 367 PANTHER PTHR35810 14 357 8.0E-135 T 22-04-2016 R615_RS03775 5e278e235245c31db1e45e053dfa7864 367 PANTHER PTHR35810:SF1 14 357 8.0E-135 T 22-04-2016 R615_RS03775 5e278e235245c31db1e45e053dfa7864 367 Pfam PF13310 Virulence protein RhuM family 79 330 6.4E-105 T 22-04-2016 IPR011204 Virulence protein RhuM-like R615_RS08350 31249fd037d7911d6f3489d1f1460b50 356 Pfam PF05175 Methyltransferase small domain 185 350 2.5E-52 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 R615_RS08350 31249fd037d7911d6f3489d1f1460b50 356 PIRSF PIRSF037565 3 355 9.1E-85 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 R615_RS08350 31249fd037d7911d6f3489d1f1460b50 356 Gene3D G3DSA:3.40.50.150 179 346 2.4E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS08350 31249fd037d7911d6f3489d1f1460b50 356 PANTHER PTHR18895 73 349 1.4E-53 T 22-04-2016 R615_RS08350 31249fd037d7911d6f3489d1f1460b50 356 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 283 289 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 R615_RS08350 31249fd037d7911d6f3489d1f1460b50 356 SUPERFAMILY SSF53335 174 327 2.41E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS08350 31249fd037d7911d6f3489d1f1460b50 356 PANTHER PTHR18895:SF6 73 349 1.4E-53 T 22-04-2016 R615_RS17505 748a072985833be80d1bef3d9c00b595 243 Pfam PF10099 Anti-sigma-K factor rskA 60 231 7.7E-19 T 22-04-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 R615_RS16940 9a308c6a103b5e61c6dbfac884c59287 195 Gene3D G3DSA:2.40.160.20 29 175 1.5E-8 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS16940 9a308c6a103b5e61c6dbfac884c59287 195 SUPERFAMILY SSF56925 26 186 8.63E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS04090 c7b5b0b5d833bb8cf882c6e7ba463a6d 80 PANTHER PTHR31435 1 79 2.1E-20 T 22-04-2016 R615_RS04090 c7b5b0b5d833bb8cf882c6e7ba463a6d 80 Gene3D G3DSA:3.40.630.30 2 79 1.4E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS04090 c7b5b0b5d833bb8cf882c6e7ba463a6d 80 SUPERFAMILY SSF55729 2 78 3.83E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS04090 c7b5b0b5d833bb8cf882c6e7ba463a6d 80 Pfam PF14542 GCN5-related N-acetyl-transferase 11 79 5.9E-18 T 22-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase R615_RS09965 1c674e7b205603f64e5b672cdc75997e 107 Pfam PF11804 Protein of unknown function (DUF3325) 10 99 4.2E-13 T 22-04-2016 IPR021762 Protein of unknown function DUF3325 R615_RS12840 286b9e90b09b0066ef88599f093d85c1 84 Gene3D G3DSA:1.10.260.40 3 72 5.8E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS12840 286b9e90b09b0066ef88599f093d85c1 84 SMART SM00530 13 68 8.4E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS12840 286b9e90b09b0066ef88599f093d85c1 84 Pfam PF01381 Helix-turn-helix 17 66 1.8E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS12840 286b9e90b09b0066ef88599f093d85c1 84 SUPERFAMILY SSF47413 4 70 7.78E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS12115 6af526c835c64f89d1f7cb80c3707ea5 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 44 205 36.872 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 R615_RS12115 6af526c835c64f89d1f7cb80c3707ea5 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 47 199 3.5E-63 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 R615_RS12115 6af526c835c64f89d1f7cb80c3707ea5 212 Gene3D G3DSA:3.30.1060.10 10 199 1.9E-74 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 R615_RS12115 6af526c835c64f89d1f7cb80c3707ea5 212 Pfam PF01625 Peptide methionine sulfoxide reductase 48 199 1.2E-62 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 R615_RS12115 6af526c835c64f89d1f7cb80c3707ea5 212 PANTHER PTHR10173:SF36 9 203 7.5E-94 T 22-04-2016 R615_RS12115 6af526c835c64f89d1f7cb80c3707ea5 212 SUPERFAMILY SSF55068 7 203 3.27E-73 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 R615_RS12115 6af526c835c64f89d1f7cb80c3707ea5 212 PANTHER PTHR10173 9 203 7.5E-94 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 R615_RS03420 edd3419117347fa9d7e09bae50c20f7f 423 SUPERFAMILY SSF51395 2 368 1.96E-106 T 22-04-2016 R615_RS03420 edd3419117347fa9d7e09bae50c20f7f 423 Gene3D G3DSA:3.20.20.70 1 355 3.4E-116 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS03420 edd3419117347fa9d7e09bae50c20f7f 423 PANTHER PTHR22893 1 358 1.3E-142 T 22-04-2016 R615_RS03420 edd3419117347fa9d7e09bae50c20f7f 423 PANTHER PTHR22893:SF6 1 358 1.3E-142 T 22-04-2016 R615_RS03420 edd3419117347fa9d7e09bae50c20f7f 423 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 351 2.6E-57 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 R615_RS09080 89ae91fabe3210858a6dad281ba1fc73 366 Gene3D G3DSA:3.30.160.60 322 356 2.2E-18 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 R615_RS09080 89ae91fabe3210858a6dad281ba1fc73 366 PANTHER PTHR30518 10 361 2.0E-79 T 22-04-2016 R615_RS09080 89ae91fabe3210858a6dad281ba1fc73 366 PANTHER PTHR30518:SF2 10 361 2.0E-79 T 22-04-2016 R615_RS09080 89ae91fabe3210858a6dad281ba1fc73 366 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 30 353 8.2E-76 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like R615_RS09080 89ae91fabe3210858a6dad281ba1fc73 366 Pfam PF02618 YceG-like family 63 349 8.8E-76 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like R615_RS07390 f8a0152d3dac3a1e91002728cd287994 563 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 11 116 2.8E-17 T 22-04-2016 IPR033414 Periplasmic sensor domain UniPathway: UPA00073 R615_RS07390 f8a0152d3dac3a1e91002728cd287994 563 SUPERFAMILY SSF55785 201 326 1.82E-7 T 22-04-2016 IPR000014 PAS domain R615_RS07390 f8a0152d3dac3a1e91002728cd287994 563 Gene3D G3DSA:3.30.450.20 201 329 1.3E-8 T 22-04-2016 R615_RS07390 f8a0152d3dac3a1e91002728cd287994 563 Pfam PF00672 HAMP domain 134 195 6.5E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS10395 242324a804fe81631ddc131b7292482e 119 Gene3D G3DSA:1.10.10.60 14 101 9.3E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS10395 242324a804fe81631ddc131b7292482e 119 SUPERFAMILY SSF46689 10 107 4.48E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS10395 242324a804fe81631ddc131b7292482e 119 PANTHER PTHR33215 8 113 5.7E-17 T 22-04-2016 R615_RS10395 242324a804fe81631ddc131b7292482e 119 Pfam PF01527 Transposase 11 94 4.7E-15 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 R615_RS02865 3e57fb444e7511f7ac3a20cdaef0c20f 446 PANTHER PTHR30097 47 405 1.1E-46 T 22-04-2016 R615_RS02865 3e57fb444e7511f7ac3a20cdaef0c20f 446 SUPERFAMILY SSF111369 126 318 2.88E-6 T 22-04-2016 R615_RS02865 3e57fb444e7511f7ac3a20cdaef0c20f 446 PANTHER PTHR30097:SF3 47 405 1.1E-46 T 22-04-2016 R615_RS02865 3e57fb444e7511f7ac3a20cdaef0c20f 446 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 313 8.6E-41 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain R615_RS02865 3e57fb444e7511f7ac3a20cdaef0c20f 446 Gene3D G3DSA:2.40.50.100 128 159 1.0E-7 T 22-04-2016 R615_RS02865 3e57fb444e7511f7ac3a20cdaef0c20f 446 Gene3D G3DSA:2.40.50.100 210 242 1.0E-7 T 22-04-2016 R615_RS03060 23e181c841c888743d2d0b90069058d0 118 Gene3D G3DSA:3.30.460.10 3 106 1.0E-38 T 22-04-2016 R615_RS03060 23e181c841c888743d2d0b90069058d0 118 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 3.2E-29 T 22-04-2016 R615_RS03060 23e181c841c888743d2d0b90069058d0 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.978 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS R615_RS03060 23e181c841c888743d2d0b90069058d0 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 2.6E-38 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS R615_RS03060 23e181c841c888743d2d0b90069058d0 118 SUPERFAMILY SSF81301 1 108 5.72E-39 T 22-04-2016 R615_RS03060 23e181c841c888743d2d0b90069058d0 118 PANTHER PTHR21043 9 105 4.1E-42 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS R615_RS11040 87e2277f1c1f03ccc2baf56c448f1bf2 168 Gene3D G3DSA:3.40.1280.10 8 149 5.5E-17 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal R615_RS11040 87e2277f1c1f03ccc2baf56c448f1bf2 168 Pfam PF00588 SpoU rRNA Methylase family 6 139 6.0E-19 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 R615_RS11040 87e2277f1c1f03ccc2baf56c448f1bf2 168 SUPERFAMILY SSF75217 6 147 4.66E-26 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases R615_RS08255 8c841a8291a87fa98a289df20afb4abb 386 PANTHER PTHR16254 1 368 6.7E-62 T 22-04-2016 R615_RS08255 8c841a8291a87fa98a289df20afb4abb 386 Pfam PF00999 Sodium/hydrogen exchanger family 12 367 1.9E-43 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 R615_RS08255 8c841a8291a87fa98a289df20afb4abb 386 PANTHER PTHR16254:SF14 1 368 6.7E-62 T 22-04-2016 R615_RS14895 c66702b782bddcd28f0d1183a90ecbd3 125 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 103 2.5E-24 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 R615_RS14895 c66702b782bddcd28f0d1183a90ecbd3 125 PANTHER PTHR34583:SF1 1 105 1.4E-45 T 22-04-2016 R615_RS14895 c66702b782bddcd28f0d1183a90ecbd3 125 PANTHER PTHR34583 1 105 1.4E-45 T 22-04-2016 R615_RS02395 fda125aa479d0e2904f52b43b235061d 341 PANTHER PTHR30329:SF2 2 296 9.4E-89 T 22-04-2016 R615_RS02395 fda125aa479d0e2904f52b43b235061d 341 PANTHER PTHR30329 2 296 9.4E-89 T 22-04-2016 R615_RS02395 fda125aa479d0e2904f52b43b235061d 341 Gene3D G3DSA:3.40.47.10 95 139 1.8E-4 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS02395 fda125aa479d0e2904f52b43b235061d 341 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 16 67 4.1E-15 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain R615_RS02395 fda125aa479d0e2904f52b43b235061d 341 SUPERFAMILY SSF103088 163 272 1.27E-21 T 22-04-2016 IPR006665 OmpA-like domain R615_RS02395 fda125aa479d0e2904f52b43b235061d 341 Gene3D G3DSA:3.30.1330.60 163 272 4.6E-20 T 22-04-2016 IPR006665 OmpA-like domain R615_RS02395 fda125aa479d0e2904f52b43b235061d 341 Pfam PF00691 OmpA family 167 264 2.6E-13 T 22-04-2016 IPR006665 OmpA-like domain R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.1E-49 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.1E-49 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.1E-49 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.1E-49 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.1E-49 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.1E-49 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 PANTHER PTHR11735:SF6 1 338 3.1E-160 T 22-04-2016 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 1.1E-131 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 SUPERFAMILY SSF53067 101 313 5.5E-43 T 22-04-2016 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 PANTHER PTHR11735 1 338 3.1E-160 T 22-04-2016 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 SUPERFAMILY SSF53067 3 123 2.27E-30 T 22-04-2016 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 63.191 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 3.3E-114 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 Gene3D G3DSA:3.30.420.40 1 159 3.6E-48 T 22-04-2016 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 Pfam PF00814 Glycoprotease family 24 311 9.3E-102 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 R615_RS14200 61b1d196919ce1e710738f2c4f67dd2b 346 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 R615_RS14390 69d395f7a760ef764ecc79bfa1ef3a37 161 SUPERFAMILY SSF142433 5 159 6.8E-53 T 22-04-2016 IPR008136 CinA, C-terminal R615_RS14390 69d395f7a760ef764ecc79bfa1ef3a37 161 Pfam PF02464 Competence-damaged protein 11 156 3.0E-54 T 22-04-2016 IPR008136 CinA, C-terminal R615_RS14390 69d395f7a760ef764ecc79bfa1ef3a37 161 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 156 1.0E-50 T 22-04-2016 IPR008136 CinA, C-terminal R615_RS14390 69d395f7a760ef764ecc79bfa1ef3a37 161 Gene3D G3DSA:3.90.950.20 6 159 1.6E-52 T 22-04-2016 IPR008136 CinA, C-terminal R615_RS14390 69d395f7a760ef764ecc79bfa1ef3a37 161 PANTHER PTHR13939 11 161 4.7E-58 T 22-04-2016 R615_RS12450 a7da7f81e213c904807979e800bc6a9d 276 Pfam PF00814 Glycoprotease family 78 196 6.1E-28 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 R615_RS12450 a7da7f81e213c904807979e800bc6a9d 276 PANTHER PTHR11735:SF11 30 177 2.3E-45 T 22-04-2016 R615_RS12450 a7da7f81e213c904807979e800bc6a9d 276 SUPERFAMILY SSF53067 156 256 1.55E-12 T 22-04-2016 R615_RS12450 a7da7f81e213c904807979e800bc6a9d 276 Gene3D G3DSA:3.30.420.40 50 179 3.2E-39 T 22-04-2016 R615_RS12450 a7da7f81e213c904807979e800bc6a9d 276 SUPERFAMILY SSF53067 50 151 8.2E-28 T 22-04-2016 R615_RS12450 a7da7f81e213c904807979e800bc6a9d 276 PANTHER PTHR11735 30 177 2.3E-45 T 22-04-2016 R615_RS12450 a7da7f81e213c904807979e800bc6a9d 276 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 50 258 8.8E-56 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 R615_RS11225 832179023a8d9e0cf4a34c2fda1ac37e 319 SUPERFAMILY SSF52540 7 292 5.24E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11225 832179023a8d9e0cf4a34c2fda1ac37e 319 PIRSF PIRSF002849 1 319 1.4E-131 T 22-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted R615_RS11225 832179023a8d9e0cf4a34c2fda1ac37e 319 PANTHER PTHR11603:SF148 7 318 2.8E-149 T 22-04-2016 R615_RS11225 832179023a8d9e0cf4a34c2fda1ac37e 319 PANTHER PTHR11603 7 318 2.8E-149 T 22-04-2016 R615_RS11225 832179023a8d9e0cf4a34c2fda1ac37e 319 Gene3D G3DSA:1.10.8.300 201 316 2.3E-45 T 22-04-2016 R615_RS11225 832179023a8d9e0cf4a34c2fda1ac37e 319 Gene3D G3DSA:3.40.50.300 18 183 9.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11225 832179023a8d9e0cf4a34c2fda1ac37e 319 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 37 167 2.4E-64 T 22-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 R615_RS08935 35c00ad8639d84a57b35743cc1078300 107 PRINTS PR00340 P-II protein signature 51 74 1.1E-7 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS08935 35c00ad8639d84a57b35743cc1078300 107 PRINTS PR00340 P-II protein signature 2 17 1.1E-7 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS08935 35c00ad8639d84a57b35743cc1078300 107 PRINTS PR00340 P-II protein signature 23 41 1.1E-7 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS08935 35c00ad8639d84a57b35743cc1078300 107 PRINTS PR00340 P-II protein signature 82 102 1.1E-7 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS08935 35c00ad8639d84a57b35743cc1078300 107 Gene3D G3DSA:3.30.70.120 1 102 1.6E-19 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal R615_RS08935 35c00ad8639d84a57b35743cc1078300 107 SMART SM00938 4 102 3.7E-5 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS08935 35c00ad8639d84a57b35743cc1078300 107 SUPERFAMILY SSF54913 1 104 1.08E-17 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta R615_RS08935 35c00ad8639d84a57b35743cc1078300 107 Pfam PF00543 Nitrogen regulatory protein P-II 4 101 1.3E-9 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 Pfam PF00815 Histidinol dehydrogenase 29 431 3.4E-170 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 PRINTS PR00083 Histidinol dehydrogenase signature 234 255 5.3E-87 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 PRINTS PR00083 Histidinol dehydrogenase signature 256 275 5.3E-87 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 PRINTS PR00083 Histidinol dehydrogenase signature 366 384 5.3E-87 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 PRINTS PR00083 Histidinol dehydrogenase signature 175 201 5.3E-87 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 PRINTS PR00083 Histidinol dehydrogenase signature 325 350 5.3E-87 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 PRINTS PR00083 Histidinol dehydrogenase signature 37 61 5.3E-87 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 PRINTS PR00083 Histidinol dehydrogenase signature 141 167 5.3E-87 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 PRINTS PR00083 Histidinol dehydrogenase signature 205 230 5.3E-87 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 PIRSF PIRSF000099 2 434 1.2E-160 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 37 431 1.7E-162 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 Gene3D G3DSA:3.40.50.1980 32 244 3.8E-81 T 22-04-2016 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 234 266 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 PANTHER PTHR21256 1 434 1.9E-197 T 22-04-2016 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 SUPERFAMILY SSF53720 33 432 1.41E-89 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 R615_RS02145 db63937ef42c9d747030a1aceb98605b 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 9 432 40.749 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 R615_RS05060 947654f2bb962a9be41f5d53de5f99c0 159 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 77 151 2.7E-33 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 R615_RS05060 947654f2bb962a9be41f5d53de5f99c0 159 PANTHER PTHR22617 62 158 2.5E-28 T 22-04-2016 R615_RS05060 947654f2bb962a9be41f5d53de5f99c0 159 Gene3D G3DSA:2.30.330.10 72 158 1.4E-36 T 22-04-2016 R615_RS05060 947654f2bb962a9be41f5d53de5f99c0 159 PRINTS PR00956 Flagellar motor switch protein FliN signature 112 125 2.8E-27 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 R615_RS05060 947654f2bb962a9be41f5d53de5f99c0 159 PRINTS PR00956 Flagellar motor switch protein FliN signature 125 140 2.8E-27 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 R615_RS05060 947654f2bb962a9be41f5d53de5f99c0 159 PRINTS PR00956 Flagellar motor switch protein FliN signature 96 112 2.8E-27 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 R615_RS05060 947654f2bb962a9be41f5d53de5f99c0 159 PRINTS PR00956 Flagellar motor switch protein FliN signature 79 95 2.8E-27 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 R615_RS05060 947654f2bb962a9be41f5d53de5f99c0 159 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 80 149 7.8E-24 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) R615_RS05060 947654f2bb962a9be41f5d53de5f99c0 159 SUPERFAMILY SSF101801 77 157 6.41E-25 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) R615_RS12155 38065f54e1ec06cea852715fe47b6fec 322 Pfam PF01758 Sodium Bile acid symporter family 35 212 4.6E-46 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 R615_RS12155 38065f54e1ec06cea852715fe47b6fec 322 PANTHER PTHR10361 32 298 5.3E-88 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 R615_RS05305 b27558a9868c3bb75c0eb6713ba07b26 459 Gene3D G3DSA:3.40.50.300 217 380 6.3E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05305 b27558a9868c3bb75c0eb6713ba07b26 459 SMART SM00490 264 345 1.9E-30 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS05305 b27558a9868c3bb75c0eb6713ba07b26 459 SUPERFAMILY SSF52540 39 356 9.49E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05305 b27558a9868c3bb75c0eb6713ba07b26 459 Pfam PF00270 DEAD/DEAH box helicase 31 196 5.9E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS05305 b27558a9868c3bb75c0eb6713ba07b26 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site R615_RS05305 b27558a9868c3bb75c0eb6713ba07b26 459 PANTHER PTHR24031 9 374 9.0E-142 T 22-04-2016 R615_RS05305 b27558a9868c3bb75c0eb6713ba07b26 459 Gene3D G3DSA:3.40.50.300 9 216 1.3E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05305 b27558a9868c3bb75c0eb6713ba07b26 459 Pfam PF00271 Helicase conserved C-terminal domain 244 345 4.5E-28 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS05305 b27558a9868c3bb75c0eb6713ba07b26 459 SMART SM00487 26 227 4.9E-51 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS16155 ea277a3676734dae794633af64aef302 180 PANTHER PTHR10192 6 171 7.1E-83 T 22-04-2016 R615_RS16155 ea277a3676734dae794633af64aef302 180 Gene3D G3DSA:3.40.980.10 9 160 1.2E-46 T 22-04-2016 IPR001453 MoaB/Mog domain R615_RS16155 ea277a3676734dae794633af64aef302 180 Pfam PF00994 Probable molybdopterin binding domain 16 156 2.1E-33 T 22-04-2016 IPR001453 MoaB/Mog domain R615_RS16155 ea277a3676734dae794633af64aef302 180 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 153 1.3E-35 T 22-04-2016 IPR001453 MoaB/Mog domain R615_RS16155 ea277a3676734dae794633af64aef302 180 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 73 86 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 R615_RS16155 ea277a3676734dae794633af64aef302 180 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 8 168 1.5E-80 T 22-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 R615_RS16155 ea277a3676734dae794633af64aef302 180 PIRSF PIRSF006443 1 166 2.7E-62 T 22-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 R615_RS16155 ea277a3676734dae794633af64aef302 180 SMART SM00852 15 159 6.4E-25 T 22-04-2016 IPR001453 MoaB/Mog domain R615_RS16155 ea277a3676734dae794633af64aef302 180 SUPERFAMILY SSF53218 7 167 1.31E-44 T 22-04-2016 IPR001453 MoaB/Mog domain R615_RS16155 ea277a3676734dae794633af64aef302 180 PANTHER PTHR10192:SF18 6 171 7.1E-83 T 22-04-2016 R615_RS08115 2556b3a3cde970b28027c0a7f8a1193b 206 PANTHER PTHR30506 1 206 5.0E-97 T 22-04-2016 R615_RS08115 2556b3a3cde970b28027c0a7f8a1193b 206 PANTHER PTHR30506:SF2 1 206 5.0E-97 T 22-04-2016 R615_RS08115 2556b3a3cde970b28027c0a7f8a1193b 206 Pfam PF03458 UPF0126 domain 90 163 2.1E-22 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 R615_RS08115 2556b3a3cde970b28027c0a7f8a1193b 206 Pfam PF03458 UPF0126 domain 6 78 1.2E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 R615_RS17095 2e8a49911873f16567bcc5fab2faca52 280 PANTHER PTHR39456 2 271 2.3E-75 T 22-04-2016 R615_RS17095 2e8a49911873f16567bcc5fab2faca52 280 Pfam PF10118 Predicted metal-dependent hydrolase 17 262 7.4E-87 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS17095 2e8a49911873f16567bcc5fab2faca52 280 PANTHER PTHR39456:SF2 2 271 2.3E-75 T 22-04-2016 R615_RS17095 2e8a49911873f16567bcc5fab2faca52 280 PIRSF PIRSF007580 1 279 2.5E-76 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS16310 9453ba5633d5e64f81e46d541c8606e9 210 Pfam PF07813 LTXXQ motif family protein 31 78 2.1E-5 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 R615_RS12160 2b355d9576a7bdc95eaabd8d00ed9577 173 Pfam PF07273 Protein of unknown function (DUF1439) 24 164 1.1E-29 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 R615_RS07125 3b8389c300098603a8bdffa66a6fe4e8 220 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 203 6.7E-99 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 R615_RS07125 3b8389c300098603a8bdffa66a6fe4e8 220 PANTHER PTHR30586:SF1 1 212 1.4E-132 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 R615_RS07125 3b8389c300098603a8bdffa66a6fe4e8 220 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 192 7.6E-59 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 R615_RS07125 3b8389c300098603a8bdffa66a6fe4e8 220 PIRSF PIRSF006102 1 209 3.0E-65 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 R615_RS07125 3b8389c300098603a8bdffa66a6fe4e8 220 PANTHER PTHR30586 1 212 1.4E-132 T 22-04-2016 R615_RS07125 3b8389c300098603a8bdffa66a6fe4e8 220 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 1 204 34.861 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 R615_RS10615 2faa95273c9db366eeb87111d259b40f 100 SMART SM00530 32 87 1.7E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS10615 2faa95273c9db366eeb87111d259b40f 100 Gene3D G3DSA:1.10.260.40 31 85 3.3E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS10615 2faa95273c9db366eeb87111d259b40f 100 Pfam PF13744 Helix-turn-helix domain 6 88 1.2E-12 T 22-04-2016 R615_RS10615 2faa95273c9db366eeb87111d259b40f 100 SUPERFAMILY SSF47413 20 95 5.09E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS00360 772d63a4bf2c3a11e790ed01086f4d6d 210 Gene3D G3DSA:3.40.30.10 28 208 9.4E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS00360 772d63a4bf2c3a11e790ed01086f4d6d 210 SUPERFAMILY SSF52833 24 204 2.77E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS00360 772d63a4bf2c3a11e790ed01086f4d6d 210 PIRSF PIRSF001488 5 209 3.2E-55 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL R615_RS00360 772d63a4bf2c3a11e790ed01086f4d6d 210 Pfam PF01323 DSBA-like thioredoxin domain 68 187 5.3E-12 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 R615_RS00360 772d63a4bf2c3a11e790ed01086f4d6d 210 PANTHER PTHR35891:SF2 1 208 9.5E-56 T 22-04-2016 R615_RS00360 772d63a4bf2c3a11e790ed01086f4d6d 210 PANTHER PTHR35891 1 208 9.5E-56 T 22-04-2016 R615_RS11545 37b645cfd2a9d375f212115fde34c99a 303 Gene3D G3DSA:3.40.50.1100 100 291 2.2E-32 T 22-04-2016 R615_RS11545 37b645cfd2a9d375f212115fde34c99a 303 SUPERFAMILY SSF53686 27 289 1.82E-36 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme R615_RS11545 37b645cfd2a9d375f212115fde34c99a 303 PIRSF PIRSF006278 5 299 7.1E-49 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase R615_RS11545 37b645cfd2a9d375f212115fde34c99a 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 41 283 5.6E-13 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme R615_RS07220 193e76997a124b1efca47eb21a587b68 144 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 5 142 1.5E-41 T 22-04-2016 IPR011747 Conserved hypothetical protein CHP02241 R615_RS07220 193e76997a124b1efca47eb21a587b68 144 PANTHER PTHR38009 1 143 2.5E-27 T 22-04-2016 R615_RS07220 193e76997a124b1efca47eb21a587b68 144 PANTHER PTHR38009:SF1 1 143 2.5E-27 T 22-04-2016 R615_RS07220 193e76997a124b1efca47eb21a587b68 144 Pfam PF06841 T4-like virus tail tube protein gp19 9 140 1.6E-46 T 22-04-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 R615_RS10960 9407297484f188a5a8f6e60ee998a81d 459 SUPERFAMILY SSF52540 72 353 8.07E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10960 9407297484f188a5a8f6e60ee998a81d 459 SMART SM00487 23 220 6.1E-62 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS10960 9407297484f188a5a8f6e60ee998a81d 459 Gene3D G3DSA:3.40.50.300 213 370 8.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10960 9407297484f188a5a8f6e60ee998a81d 459 Pfam PF00270 DEAD/DEAH box helicase 28 194 1.5E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS10960 9407297484f188a5a8f6e60ee998a81d 459 Pfam PF03880 DbpA RNA binding domain 387 456 8.2E-22 T 22-04-2016 IPR005580 DbpA, RNA-binding domain R615_RS10960 9407297484f188a5a8f6e60ee998a81d 459 PANTHER PTHR24031:SF180 1 435 4.1E-215 T 22-04-2016 R615_RS10960 9407297484f188a5a8f6e60ee998a81d 459 PANTHER PTHR24031 1 435 4.1E-215 T 22-04-2016 R615_RS10960 9407297484f188a5a8f6e60ee998a81d 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site R615_RS10960 9407297484f188a5a8f6e60ee998a81d 459 SMART SM00490 256 337 3.9E-30 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS10960 9407297484f188a5a8f6e60ee998a81d 459 Gene3D G3DSA:3.40.50.300 3 209 3.3E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10960 9407297484f188a5a8f6e60ee998a81d 459 Pfam PF00271 Helicase conserved C-terminal domain 243 337 2.3E-26 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS14730 c57ccf4cf02b601cce1e07e8fbaf5e85 121 PIRSF PIRSF020555 1 121 5.8E-27 T 22-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats R615_RS14730 c57ccf4cf02b601cce1e07e8fbaf5e85 121 Pfam PF16068 Domain of unknown function (DUF4810) 27 111 1.0E-26 T 22-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats R615_RS12640 1a04cf827ca55c22839a25d7acb6a9f7 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.2E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS12640 1a04cf827ca55c22839a25d7acb6a9f7 321 PANTHER PTHR30537 1 312 7.6E-100 T 22-04-2016 R615_RS12640 1a04cf827ca55c22839a25d7acb6a9f7 321 Pfam PF03466 LysR substrate binding domain 89 294 1.2E-35 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS12640 1a04cf827ca55c22839a25d7acb6a9f7 321 Gene3D G3DSA:3.40.190.10 94 175 1.0E-16 T 22-04-2016 R615_RS12640 1a04cf827ca55c22839a25d7acb6a9f7 321 Gene3D G3DSA:3.40.190.10 176 262 2.0E-14 T 22-04-2016 R615_RS12640 1a04cf827ca55c22839a25d7acb6a9f7 321 SUPERFAMILY SSF46785 2 85 9.31E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS12640 1a04cf827ca55c22839a25d7acb6a9f7 321 SUPERFAMILY SSF53850 90 297 2.53E-37 T 22-04-2016 R615_RS12640 1a04cf827ca55c22839a25d7acb6a9f7 321 Gene3D G3DSA:1.10.10.10 1 85 2.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS12640 1a04cf827ca55c22839a25d7acb6a9f7 321 PANTHER PTHR30537:SF5 1 312 7.6E-100 T 22-04-2016 R615_RS12640 1a04cf827ca55c22839a25d7acb6a9f7 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS12640 1a04cf827ca55c22839a25d7acb6a9f7 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS12640 1a04cf827ca55c22839a25d7acb6a9f7 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.0E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS13860 fc57e3185ab4be422b3fbc86fa90ac9e 267 Gene3D G3DSA:3.20.20.70 5 266 3.2E-104 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS13860 fc57e3185ab4be422b3fbc86fa90ac9e 267 SUPERFAMILY SSF51366 15 266 2.59E-86 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 R615_RS13860 fc57e3185ab4be422b3fbc86fa90ac9e 267 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 6 267 35.718 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 R615_RS13860 fc57e3185ab4be422b3fbc86fa90ac9e 267 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 61 79 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 R615_RS13860 fc57e3185ab4be422b3fbc86fa90ac9e 267 PANTHER PTHR22854:SF2 2 266 1.7E-107 T 22-04-2016 R615_RS13860 fc57e3185ab4be422b3fbc86fa90ac9e 267 PANTHER PTHR22854 2 266 1.7E-107 T 22-04-2016 R615_RS13860 fc57e3185ab4be422b3fbc86fa90ac9e 267 Pfam PF00218 Indole-3-glycerol phosphate synthase 8 265 1.2E-93 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 R615_RS04915 3687452603c87329a3b320157567fdd9 310 Pfam PF03462 PCRF domain 2 165 5.0E-49 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 R615_RS04915 3687452603c87329a3b320157567fdd9 310 SMART SM00937 30 140 5.8E-52 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 R615_RS04915 3687452603c87329a3b320157567fdd9 310 Gene3D G3DSA:1.20.58.410 1 61 1.3E-13 T 22-04-2016 R615_RS04915 3687452603c87329a3b320157567fdd9 310 Pfam PF00472 RF-1 domain 174 282 1.2E-38 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 R615_RS04915 3687452603c87329a3b320157567fdd9 310 PANTHER PTHR11075 3 308 1.2E-148 T 22-04-2016 R615_RS04915 3687452603c87329a3b320157567fdd9 310 SUPERFAMILY SSF75620 1 309 1.12E-126 T 22-04-2016 R615_RS04915 3687452603c87329a3b320157567fdd9 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 308 4.9E-151 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 R615_RS04915 3687452603c87329a3b320157567fdd9 310 PANTHER PTHR11075:SF6 3 308 1.2E-148 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 R615_RS04915 3687452603c87329a3b320157567fdd9 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 R615_RS04915 3687452603c87329a3b320157567fdd9 310 Gene3D G3DSA:3.30.160.20 172 251 1.2E-36 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain R615_RS09810 3cc4f593f7685b114d4d9eba7de99121 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 R615_RS09810 3cc4f593f7685b114d4d9eba7de99121 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 117 2.5E-27 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 R615_RS09810 3cc4f593f7685b114d4d9eba7de99121 124 PANTHER PTHR10978:SF4 1 124 1.1E-51 T 22-04-2016 R615_RS09810 3cc4f593f7685b114d4d9eba7de99121 124 Gene3D G3DSA:1.20.1300.10 2 124 1.7E-37 T 22-04-2016 R615_RS09810 3cc4f593f7685b114d4d9eba7de99121 124 PANTHER PTHR10978 1 124 1.1E-51 T 22-04-2016 R615_RS09810 3cc4f593f7685b114d4d9eba7de99121 124 SUPERFAMILY SSF81343 2 124 8.94E-31 T 22-04-2016 R615_RS09810 3cc4f593f7685b114d4d9eba7de99121 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 4 122 1.0E-36 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 R615_RS09810 3cc4f593f7685b114d4d9eba7de99121 124 PIRSF PIRSF000178 1 124 1.6E-26 T 22-04-2016 R615_RS07370 b85414c1ba1ac9f7dfbab2f30458b63a 367 Pfam PF00487 Fatty acid desaturase 63 332 2.9E-35 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 R615_RS07370 b85414c1ba1ac9f7dfbab2f30458b63a 367 PANTHER PTHR19353 29 352 1.4E-68 T 22-04-2016 R615_RS07370 b85414c1ba1ac9f7dfbab2f30458b63a 367 PIRSF PIRSF015921 5 363 4.4E-75 T 22-04-2016 IPR012171 Fatty acid desaturase GO:0006629|GO:0016021|GO:0016491 R615_RS07370 b85414c1ba1ac9f7dfbab2f30458b63a 367 PANTHER PTHR19353:SF30 29 352 1.4E-68 T 22-04-2016 R615_RS04685 7e91bf7a027ff0c871f1c937055e5c94 451 Pfam PF04932 O-Antigen ligase 219 363 2.5E-13 T 22-04-2016 IPR007016 O-antigen ligase-related R615_RS11680 8b4321ec937f6fe013ba5b6872887bfd 292 Pfam PF07859 alpha/beta hydrolase fold 66 159 1.7E-11 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 R615_RS11680 8b4321ec937f6fe013ba5b6872887bfd 292 SUPERFAMILY SSF53474 32 267 3.85E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS11680 8b4321ec937f6fe013ba5b6872887bfd 292 PANTHER PTHR23024 20 261 4.0E-33 T 22-04-2016 R615_RS11680 8b4321ec937f6fe013ba5b6872887bfd 292 Gene3D G3DSA:3.40.50.1820 33 269 3.1E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS07800 870ebc711ac58d7bba25e6979a0cc44e 380 SUPERFAMILY SSF51735 91 254 1.49E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07800 870ebc711ac58d7bba25e6979a0cc44e 380 Gene3D G3DSA:3.40.50.720 2 107 1.5E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07800 870ebc711ac58d7bba25e6979a0cc44e 380 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 254 4.0E-32 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 R615_RS07800 870ebc711ac58d7bba25e6979a0cc44e 380 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 195 211 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site R615_RS07800 870ebc711ac58d7bba25e6979a0cc44e 380 Pfam PF11890 Domain of unknown function (DUF3410) 287 360 4.7E-13 T 22-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 R615_RS07800 870ebc711ac58d7bba25e6979a0cc44e 380 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 360 43.528 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 R615_RS07800 870ebc711ac58d7bba25e6979a0cc44e 380 Gene3D G3DSA:3.40.50.720 113 257 1.6E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07800 870ebc711ac58d7bba25e6979a0cc44e 380 PANTHER PTHR10996:SF111 1 329 9.3E-113 T 22-04-2016 R615_RS07800 870ebc711ac58d7bba25e6979a0cc44e 380 SUPERFAMILY SSF52283 4 103 2.76E-19 T 22-04-2016 R615_RS07800 870ebc711ac58d7bba25e6979a0cc44e 380 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 28 209 5.0E-17 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 R615_RS07800 870ebc711ac58d7bba25e6979a0cc44e 380 PANTHER PTHR10996 1 329 9.3E-113 T 22-04-2016 R615_RS14855 60e1211eb04c3635a6ccf637fa6eaade 190 Gene3D G3DSA:2.40.10.220 84 183 7.8E-5 T 22-04-2016 R615_RS14855 60e1211eb04c3635a6ccf637fa6eaade 190 Pfam PF07238 PilZ domain 89 173 5.3E-10 T 22-04-2016 IPR009875 PilZ domain GO:0035438 R615_RS01325 48f3736b8ca7fe37811483bb783f943f 409 Pfam PF01882 Protein of unknown function DUF58 204 289 1.4E-17 T 22-04-2016 IPR002881 Domain of unknown function DUF58 R615_RS01325 48f3736b8ca7fe37811483bb783f943f 409 PANTHER PTHR34351 24 406 6.0E-35 T 22-04-2016 R615_RS04405 56a49d936af318d7c073fa2551c09322 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 5 117 31.315 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS04405 56a49d936af318d7c073fa2551c09322 117 SUPERFAMILY SSF50104 5 116 5.82E-45 T 22-04-2016 IPR008991 Translation protein SH3-like domain R615_RS04405 56a49d936af318d7c073fa2551c09322 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS04405 56a49d936af318d7c073fa2551c09322 117 PRINTS PR00061 Ribosomal protein L19 signature 37 66 2.2E-40 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS04405 56a49d936af318d7c073fa2551c09322 117 PRINTS PR00061 Ribosomal protein L19 signature 7 36 2.2E-40 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS04405 56a49d936af318d7c073fa2551c09322 117 PRINTS PR00061 Ribosomal protein L19 signature 91 116 2.2E-40 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS04405 56a49d936af318d7c073fa2551c09322 117 Pfam PF01245 Ribosomal protein L19 7 116 2.7E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS04405 56a49d936af318d7c073fa2551c09322 117 PIRSF PIRSF002191 1 117 3.2E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS04405 56a49d936af318d7c073fa2551c09322 117 PANTHER PTHR15680 5 117 4.6E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS04405 56a49d936af318d7c073fa2551c09322 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 6 116 5.3E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS01865 c4bb54c961023a928b9dff6c09a3faf9 252 Pfam PF02167 Cytochrome C1 family 31 251 2.3E-14 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 R615_RS01865 c4bb54c961023a928b9dff6c09a3faf9 252 PANTHER PTHR10266:SF3 1 162 5.0E-47 T 22-04-2016 R615_RS01865 c4bb54c961023a928b9dff6c09a3faf9 252 PANTHER PTHR10266:SF3 195 252 5.0E-47 T 22-04-2016 R615_RS01865 c4bb54c961023a928b9dff6c09a3faf9 252 Gene3D G3DSA:1.20.5.100 221 252 1.8E-11 T 22-04-2016 R615_RS01865 c4bb54c961023a928b9dff6c09a3faf9 252 SUPERFAMILY SSF46626 193 216 7.37E-44 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS01865 c4bb54c961023a928b9dff6c09a3faf9 252 SUPERFAMILY SSF46626 16 160 7.37E-44 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS01865 c4bb54c961023a928b9dff6c09a3faf9 252 Gene3D G3DSA:1.10.760.10 17 217 2.4E-57 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS01865 c4bb54c961023a928b9dff6c09a3faf9 252 PANTHER PTHR10266 1 162 5.0E-47 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 R615_RS01865 c4bb54c961023a928b9dff6c09a3faf9 252 PANTHER PTHR10266 195 252 5.0E-47 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 R615_RS08455 c647c5c8b9de586ab49bdec6289fa986 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.4E-28 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 R615_RS08455 c647c5c8b9de586ab49bdec6289fa986 72 SUPERFAMILY SSF50249 1 70 5.72E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS08455 c647c5c8b9de586ab49bdec6289fa986 72 SMART SM00316 4 72 8.0E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 R615_RS08455 c647c5c8b9de586ab49bdec6289fa986 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.18 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 R615_RS08455 c647c5c8b9de586ab49bdec6289fa986 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.9E-38 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 R615_RS08455 c647c5c8b9de586ab49bdec6289fa986 72 Gene3D G3DSA:2.40.50.140 1 71 3.4E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS08455 c647c5c8b9de586ab49bdec6289fa986 72 PANTHER PTHR33370 1 72 2.8E-49 T 22-04-2016 R615_RS06505 5800ad1c4afcbaee360c5baaa627e003 427 SUPERFAMILY SSF48452 320 415 6.25E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS06505 5800ad1c4afcbaee360c5baaa627e003 427 Gene3D G3DSA:1.25.40.10 320 415 4.1E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS02175 65f10d20ca7cbae2570029e6c4233b6d 310 SUPERFAMILY SSF103481 229 306 5.23E-14 T 22-04-2016 R615_RS02175 65f10d20ca7cbae2570029e6c4233b6d 310 PANTHER PTHR12715:SF5 6 310 7.4E-70 T 22-04-2016 R615_RS02175 65f10d20ca7cbae2570029e6c4233b6d 310 Pfam PF00892 EamA-like transporter family 15 151 4.2E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS02175 65f10d20ca7cbae2570029e6c4233b6d 310 Pfam PF00892 EamA-like transporter family 174 305 4.4E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS02175 65f10d20ca7cbae2570029e6c4233b6d 310 SUPERFAMILY SSF103481 50 153 1.37E-9 T 22-04-2016 R615_RS02175 65f10d20ca7cbae2570029e6c4233b6d 310 PANTHER PTHR12715 6 310 7.4E-70 T 22-04-2016 R615_RS14955 f8f43f656d34ca92e74d1a9657bbe787 184 PANTHER PTHR40278 1 184 6.8E-45 T 22-04-2016 R615_RS14955 f8f43f656d34ca92e74d1a9657bbe787 184 PANTHER PTHR40278:SF1 1 184 6.8E-45 T 22-04-2016 R615_RS14955 f8f43f656d34ca92e74d1a9657bbe787 184 Pfam PF05137 Fimbrial assembly protein (PilN) 100 173 5.9E-21 T 22-04-2016 IPR007813 Fimbrial assembly PilN R615_RS07580 716079e268e2b40dff8d0563b9bfd025 208 SUPERFAMILY SSF53474 9 182 2.75E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS07580 716079e268e2b40dff8d0563b9bfd025 208 Gene3D G3DSA:3.40.50.1820 13 203 7.2E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS07580 716079e268e2b40dff8d0563b9bfd025 208 PANTHER PTHR13136:SF4 18 204 9.5E-48 T 22-04-2016 R615_RS07580 716079e268e2b40dff8d0563b9bfd025 208 PANTHER PTHR13136 18 204 9.5E-48 T 22-04-2016 IPR026555 KAT8 regulatory NSL complex subunit 3/Testis-expressed sequence 30 protein R615_RS07580 716079e268e2b40dff8d0563b9bfd025 208 Pfam PF12697 Alpha/beta hydrolase family 16 118 5.3E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS10735 0c7c54af67730b6c2e694cbef4dba53a 121 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 32 111 5.0E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC R615_RS10735 0c7c54af67730b6c2e694cbef4dba53a 121 Pfam PF02699 Preprotein translocase subunit 34 108 2.3E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC R615_RS10735 0c7c54af67730b6c2e694cbef4dba53a 121 PRINTS PR01853 Bacterial YajC preprotein translocase signature 69 87 9.8E-13 T 22-04-2016 IPR003849 Preprotein translocase YajC R615_RS10735 0c7c54af67730b6c2e694cbef4dba53a 121 PRINTS PR01853 Bacterial YajC preprotein translocase signature 31 51 9.8E-13 T 22-04-2016 IPR003849 Preprotein translocase YajC R615_RS10735 0c7c54af67730b6c2e694cbef4dba53a 121 SMART SM01323 29 111 5.4E-38 T 22-04-2016 IPR003849 Preprotein translocase YajC R615_RS10735 0c7c54af67730b6c2e694cbef4dba53a 121 PANTHER PTHR33909:SF1 7 118 3.1E-29 T 22-04-2016 R615_RS10735 0c7c54af67730b6c2e694cbef4dba53a 121 PANTHER PTHR33909 7 118 3.1E-29 T 22-04-2016 R615_RS10325 75288d34f927bf19cd96e60988bc5f9d 493 SUPERFAMILY SSF103647 46 138 5.23E-13 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS10325 75288d34f927bf19cd96e60988bc5f9d 493 Gene3D G3DSA:4.10.1080.10 47 133 5.2E-18 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS07025 da7f1c05c6ed3ee36261e78756689502 271 Gene3D G3DSA:3.20.20.70 11 256 6.7E-45 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS07025 da7f1c05c6ed3ee36261e78756689502 271 PANTHER PTHR34266 3 266 6.7E-126 T 22-04-2016 R615_RS07025 da7f1c05c6ed3ee36261e78756689502 271 Hamap MF_00443 Thiazole synthase [thiG]. 3 261 39.603 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 R615_RS07025 da7f1c05c6ed3ee36261e78756689502 271 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 255 8.2E-97 T 22-04-2016 R615_RS07025 da7f1c05c6ed3ee36261e78756689502 271 SUPERFAMILY SSF110399 4 246 2.75E-72 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 R615_RS10530 818f2d7807d179ed9ee55f3c71941ee3 522 SUPERFAMILY SSF55874 362 514 1.3E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS10530 818f2d7807d179ed9ee55f3c71941ee3 522 Gene3D G3DSA:3.30.565.10 368 519 1.7E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS10530 818f2d7807d179ed9ee55f3c71941ee3 522 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 516 3.8E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS10530 818f2d7807d179ed9ee55f3c71941ee3 522 PANTHER PTHR24423:SF445 329 519 6.3E-39 T 22-04-2016 R615_RS10530 818f2d7807d179ed9ee55f3c71941ee3 522 PANTHER PTHR24423:SF445 266 310 6.3E-39 T 22-04-2016 R615_RS10530 818f2d7807d179ed9ee55f3c71941ee3 522 PANTHER PTHR24423 266 310 6.3E-39 T 22-04-2016 R615_RS10530 818f2d7807d179ed9ee55f3c71941ee3 522 PANTHER PTHR24423 329 519 6.3E-39 T 22-04-2016 R615_RS10530 818f2d7807d179ed9ee55f3c71941ee3 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 514 1.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS10530 818f2d7807d179ed9ee55f3c71941ee3 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 460 1.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS10530 818f2d7807d179ed9ee55f3c71941ee3 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 495 1.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS10530 818f2d7807d179ed9ee55f3c71941ee3 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 474 1.3E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS10530 818f2d7807d179ed9ee55f3c71941ee3 522 SMART SM00387 406 517 5.0E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS08310 dfc942dd817cf4082c069e44af1f9bfd 91 Pfam PF14333 Domain of unknown function (DUF4389) 11 85 4.2E-25 T 22-04-2016 IPR025498 Protein of unknown function DUF4389 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 Pfam PF13365 Trypsin-like peptidase domain 87 220 5.6E-36 T 22-04-2016 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 SUPERFAMILY SSF50156 373 459 4.47E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 Gene3D G3DSA:2.40.10.10 24 148 1.8E-37 T 22-04-2016 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 SMART SM00228 259 341 9.5E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 SMART SM00228 373 450 1.9E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 25 455 9.5E-157 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 SUPERFAMILY SSF50494 24 251 1.2E-69 T 22-04-2016 IPR009003 Peptidase S1, PA clan R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 PANTHER PTHR22939:SF98 22 47 2.5E-139 T 22-04-2016 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 PANTHER PTHR22939:SF98 70 354 2.5E-139 T 22-04-2016 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 Gene3D G3DSA:2.30.42.10 375 459 1.3E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 Gene3D G3DSA:2.30.42.10 261 357 2.8E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 Gene3D G3DSA:2.40.10.10 149 260 1.3E-46 T 22-04-2016 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 PRINTS PR00834 HtrA/DegQ protease family signature 191 208 3.8E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 PRINTS PR00834 HtrA/DegQ protease family signature 213 230 3.8E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 PRINTS PR00834 HtrA/DegQ protease family signature 96 108 3.8E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 PRINTS PR00834 HtrA/DegQ protease family signature 299 311 3.8E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 PRINTS PR00834 HtrA/DegQ protease family signature 117 137 3.8E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 PRINTS PR00834 HtrA/DegQ protease family signature 157 181 3.8E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 Pfam PF13180 PDZ domain 374 451 6.3E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 Pfam PF13180 PDZ domain 260 349 2.9E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 PANTHER PTHR22939 22 47 2.5E-139 T 22-04-2016 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 PANTHER PTHR22939 70 354 2.5E-139 T 22-04-2016 R615_RS12530 e8bc47105010b8f55cbb7e6593f56b18 461 SUPERFAMILY SSF50156 217 342 4.73E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS03090 2838cb1a5ebcf86021d92ae366fef72e 289 PANTHER PTHR13600 70 192 8.5E-13 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- R615_RS03090 2838cb1a5ebcf86021d92ae366fef72e 289 SUPERFAMILY SSF53335 62 269 1.6E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03090 2838cb1a5ebcf86021d92ae366fef72e 289 Pfam PF04072 Leucine carboxyl methyltransferase 66 180 6.1E-15 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- R615_RS03090 2838cb1a5ebcf86021d92ae366fef72e 289 Gene3D G3DSA:3.40.50.150 68 217 5.0E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS04050 c05cab718775b60b9baa17d08196d4f6 241 PANTHER PTHR10108 1 240 1.1E-65 T 22-04-2016 R615_RS04050 c05cab718775b60b9baa17d08196d4f6 241 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 3 241 38.098 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 R615_RS04050 c05cab718775b60b9baa17d08196d4f6 241 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 241 3.5E-76 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 R615_RS04050 c05cab718775b60b9baa17d08196d4f6 241 Pfam PF13649 Methyltransferase domain 62 158 1.3E-11 T 22-04-2016 R615_RS04050 c05cab718775b60b9baa17d08196d4f6 241 PIRSF PIRSF006325 1 241 1.8E-89 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 R615_RS04050 c05cab718775b60b9baa17d08196d4f6 241 Gene3D G3DSA:3.40.50.150 20 241 2.9E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS04050 c05cab718775b60b9baa17d08196d4f6 241 PANTHER PTHR10108:SF809 1 240 1.1E-65 T 22-04-2016 R615_RS04050 c05cab718775b60b9baa17d08196d4f6 241 SUPERFAMILY SSF53335 21 241 9.14E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 Gene3D G3DSA:3.40.50.620 142 300 2.0E-26 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 Gene3D G3DSA:3.40.50.620 4 141 1.7E-19 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 SUPERFAMILY SSF52402 5 146 1.42E-21 T 22-04-2016 R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 SUPERFAMILY SSF52402 153 300 3.68E-25 T 22-04-2016 R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 PRINTS PR01438 Universal stress protein signature 258 270 4.5E-9 T 22-04-2016 IPR006015 Universal stress protein A R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 PRINTS PR01438 Universal stress protein signature 276 298 4.5E-9 T 22-04-2016 IPR006015 Universal stress protein A R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 PRINTS PR01438 Universal stress protein signature 4 22 4.5E-9 T 22-04-2016 IPR006015 Universal stress protein A R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 PANTHER PTHR31964 242 305 1.4E-32 T 22-04-2016 R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 PANTHER PTHR31964 1 90 1.4E-32 T 22-04-2016 R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 Pfam PF00582 Universal stress protein family 5 145 2.2E-14 T 22-04-2016 IPR006016 UspA GO:0006950 R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 Pfam PF00582 Universal stress protein family 174 298 1.6E-18 T 22-04-2016 IPR006016 UspA GO:0006950 R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 PANTHER PTHR31964:SF41 242 305 1.4E-32 T 22-04-2016 R615_RS09685 03ff13695de3fd6b2f28b03f7e7ca2a5 308 PANTHER PTHR31964:SF41 1 90 1.4E-32 T 22-04-2016 R615_RS01545 4e77c4aad23af67c80f57b0e469eb8d8 288 Gene3D G3DSA:3.40.50.1820 20 287 3.0E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS01545 4e77c4aad23af67c80f57b0e469eb8d8 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 8.6E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS01545 4e77c4aad23af67c80f57b0e469eb8d8 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 234 248 8.6E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS01545 4e77c4aad23af67c80f57b0e469eb8d8 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 8.6E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS01545 4e77c4aad23af67c80f57b0e469eb8d8 288 SUPERFAMILY SSF53474 11 278 1.39E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS01545 4e77c4aad23af67c80f57b0e469eb8d8 288 PANTHER PTHR10992 18 182 1.8E-22 T 22-04-2016 R615_RS01545 4e77c4aad23af67c80f57b0e469eb8d8 288 PANTHER PTHR10992 220 288 1.8E-22 T 22-04-2016 R615_RS01545 4e77c4aad23af67c80f57b0e469eb8d8 288 Pfam PF12697 Alpha/beta hydrolase family 37 276 6.8E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS05345 016b05d3423fa34800a11d3fa3b7ac56 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 8.8E-78 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 R615_RS05345 016b05d3423fa34800a11d3fa3b7ac56 251 Gene3D G3DSA:3.40.1180.10 5 246 2.1E-97 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 R615_RS05345 016b05d3423fa34800a11d3fa3b7ac56 251 PANTHER PTHR10291 7 251 5.9E-116 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 R615_RS05345 016b05d3423fa34800a11d3fa3b7ac56 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 R615_RS05345 016b05d3423fa34800a11d3fa3b7ac56 251 SUPERFAMILY SSF64005 9 233 5.1E-83 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 R615_RS05345 016b05d3423fa34800a11d3fa3b7ac56 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.304 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 R615_RS05345 016b05d3423fa34800a11d3fa3b7ac56 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 1.6E-90 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 R615_RS10365 ffd31dd1183d418925052d3502a747fa 66 Pfam PF13761 Domain of unknown function (DUF4166) 5 60 1.8E-12 T 22-04-2016 IPR025311 Domain of unknown function DUF4166 R615_RS08425 730e9962e75a77cf0f57ac1bd7c1237c 149 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.4E-5 T 22-04-2016 IPR020476 NUDIX hydrolase R615_RS08425 730e9962e75a77cf0f57ac1bd7c1237c 149 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.4E-5 T 22-04-2016 IPR020476 NUDIX hydrolase R615_RS08425 730e9962e75a77cf0f57ac1bd7c1237c 149 Pfam PF00293 NUDIX domain 8 121 5.0E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 R615_RS08425 730e9962e75a77cf0f57ac1bd7c1237c 149 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 R615_RS08425 730e9962e75a77cf0f57ac1bd7c1237c 149 Gene3D G3DSA:3.90.79.10 3 147 2.8E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS08425 730e9962e75a77cf0f57ac1bd7c1237c 149 SUPERFAMILY SSF55811 5 145 2.03E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS08425 730e9962e75a77cf0f57ac1bd7c1237c 149 PANTHER PTHR22769 1 118 3.2E-23 T 22-04-2016 R615_RS09310 8a904c2e6afb66da16be391538cbe1cd 219 PANTHER PTHR30625:SF0 1 206 1.8E-34 T 22-04-2016 R615_RS09310 8a904c2e6afb66da16be391538cbe1cd 219 Pfam PF01618 MotA/TolQ/ExbB proton channel family 70 194 2.7E-27 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 R615_RS09310 8a904c2e6afb66da16be391538cbe1cd 219 PANTHER PTHR30625 1 206 1.8E-34 T 22-04-2016 R615_RS03885 3e556bc9959a811d65eeea62d3bb9518 164 PANTHER PTHR11049 1 153 2.1E-57 T 22-04-2016 R615_RS03885 3e556bc9959a811d65eeea62d3bb9518 164 Gene3D G3DSA:3.10.129.10 1 140 1.9E-50 T 22-04-2016 IPR029069 HotDog domain R615_RS03885 3e556bc9959a811d65eeea62d3bb9518 164 Pfam PF03061 Thioesterase superfamily 14 87 7.5E-15 T 22-04-2016 IPR006683 Thioesterase domain R615_RS03885 3e556bc9959a811d65eeea62d3bb9518 164 SUPERFAMILY SSF54637 1 140 4.49E-43 T 22-04-2016 IPR029069 HotDog domain R615_RS09120 85667e6de1cb324dbe17797bc01fe048 324 Gene3D G3DSA:3.90.226.10 214 296 2.1E-46 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS09120 85667e6de1cb324dbe17797bc01fe048 324 Gene3D G3DSA:3.90.226.10 49 176 2.1E-46 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS09120 85667e6de1cb324dbe17797bc01fe048 324 PANTHER PTHR30341 2 307 2.4E-101 T 22-04-2016 R615_RS09120 85667e6de1cb324dbe17797bc01fe048 324 PANTHER PTHR30341:SF1 2 307 2.4E-101 T 22-04-2016 R615_RS09120 85667e6de1cb324dbe17797bc01fe048 324 SUPERFAMILY SSF52096 213 273 9.33E-42 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS09120 85667e6de1cb324dbe17797bc01fe048 324 SUPERFAMILY SSF52096 64 184 9.33E-42 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS09120 85667e6de1cb324dbe17797bc01fe048 324 Pfam PF01343 Peptidase family S49 141 280 6.4E-31 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 R615_RS09120 85667e6de1cb324dbe17797bc01fe048 324 PRINTS PR00127 Clp protease catalytic subunit P signature 109 129 2.1E-5 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 R615_RS09120 85667e6de1cb324dbe17797bc01fe048 324 PRINTS PR00127 Clp protease catalytic subunit P signature 250 269 2.1E-5 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 R615_RS09120 85667e6de1cb324dbe17797bc01fe048 324 PRINTS PR00127 Clp protease catalytic subunit P signature 145 162 2.1E-5 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 R615_RS04190 70233f9a06d26390444fe2359131ff26 192 Pfam PF03358 NADPH-dependent FMN reductase 3 123 3.4E-20 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 R615_RS04190 70233f9a06d26390444fe2359131ff26 192 SUPERFAMILY SSF52218 3 161 1.05E-26 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS04190 70233f9a06d26390444fe2359131ff26 192 PANTHER PTHR30543 1 178 7.9E-30 T 22-04-2016 R615_RS04190 70233f9a06d26390444fe2359131ff26 192 PANTHER PTHR30543:SF1 1 178 7.9E-30 T 22-04-2016 R615_RS04190 70233f9a06d26390444fe2359131ff26 192 Gene3D G3DSA:3.40.50.360 3 176 1.4E-26 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS08245 c710f7a50a93ee5cc844ec475cab9e9d 354 Pfam PF08496 Peptidase family S49 N-terminal 2 160 6.0E-55 T 22-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 R615_RS08245 c710f7a50a93ee5cc844ec475cab9e9d 354 Gene3D G3DSA:3.90.226.10 273 312 1.6E-33 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS08245 c710f7a50a93ee5cc844ec475cab9e9d 354 Gene3D G3DSA:3.90.226.10 101 207 1.6E-33 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS08245 c710f7a50a93ee5cc844ec475cab9e9d 354 Pfam PF01343 Peptidase family S49 164 311 1.1E-43 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 R615_RS08245 c710f7a50a93ee5cc844ec475cab9e9d 354 PANTHER PTHR33209:SF2 2 350 1.1E-160 T 22-04-2016 R615_RS08245 c710f7a50a93ee5cc844ec475cab9e9d 354 SUPERFAMILY SSF52096 97 211 2.59E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS08245 c710f7a50a93ee5cc844ec475cab9e9d 354 SUPERFAMILY SSF52096 242 301 2.59E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain R615_RS08245 c710f7a50a93ee5cc844ec475cab9e9d 354 PANTHER PTHR33209 2 350 1.1E-160 T 22-04-2016 R615_RS14860 d3f3e1fba009758358748c0031f4dc4b 242 Pfam PF04452 RNA methyltransferase 20 236 3.1E-72 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS14860 d3f3e1fba009758358748c0031f4dc4b 242 PANTHER PTHR30027 1 242 3.8E-87 T 22-04-2016 R615_RS14860 d3f3e1fba009758358748c0031f4dc4b 242 Gene3D G3DSA:3.40.1280.10 4 241 1.7E-80 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal R615_RS14860 d3f3e1fba009758358748c0031f4dc4b 242 SUPERFAMILY SSF88697 4 67 1.42E-14 T 22-04-2016 IPR015947 PUA-like domain R615_RS14860 d3f3e1fba009758358748c0031f4dc4b 242 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 5 240 1.3E-67 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS14860 d3f3e1fba009758358748c0031f4dc4b 242 PANTHER PTHR30027:SF3 1 242 3.8E-87 T 22-04-2016 R615_RS14860 d3f3e1fba009758358748c0031f4dc4b 242 PIRSF PIRSF015601 3 240 6.1E-60 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 R615_RS14860 d3f3e1fba009758358748c0031f4dc4b 242 SUPERFAMILY SSF75217 76 241 4.36E-54 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases R615_RS16945 36ab93f721940fbda6a36c1c6ae66bc5 142 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 1.0E-25 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16945 36ab93f721940fbda6a36c1c6ae66bc5 142 Gene3D G3DSA:1.20.5.440 92 134 4.2E-17 T 22-04-2016 R615_RS16945 36ab93f721940fbda6a36c1c6ae66bc5 142 SUPERFAMILY SSF46604 88 136 3.4E-13 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain R615_RS16945 36ab93f721940fbda6a36c1c6ae66bc5 142 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 5.5E-31 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16945 36ab93f721940fbda6a36c1c6ae66bc5 142 PANTHER PTHR13822 1 142 2.0E-41 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16945 36ab93f721940fbda6a36c1c6ae66bc5 142 SUPERFAMILY SSF51344 4 86 1.1E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16945 36ab93f721940fbda6a36c1c6ae66bc5 142 Gene3D G3DSA:2.60.15.10 4 91 4.3E-30 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16945 36ab93f721940fbda6a36c1c6ae66bc5 142 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 19.7 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS16945 36ab93f721940fbda6a36c1c6ae66bc5 142 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 133 2.6E-9 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain R615_RS16945 36ab93f721940fbda6a36c1c6ae66bc5 142 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 1.3E-41 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 R615_RS06490 730b62faa6ad9b4a185897c919e23f22 367 PANTHER PTHR30469 1 365 1.7E-47 T 22-04-2016 R615_RS06490 730b62faa6ad9b4a185897c919e23f22 367 Gene3D G3DSA:2.40.50.100 179 210 4.6E-13 T 22-04-2016 R615_RS06490 730b62faa6ad9b4a185897c919e23f22 367 Gene3D G3DSA:2.40.50.100 70 104 4.6E-13 T 22-04-2016 R615_RS06490 730b62faa6ad9b4a185897c919e23f22 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 365 1.7E-62 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 R615_RS06490 730b62faa6ad9b4a185897c919e23f22 367 SUPERFAMILY SSF111369 66 285 6.54E-23 T 22-04-2016 R615_RS06490 730b62faa6ad9b4a185897c919e23f22 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 72 283 2.6E-19 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 PANTHER PTHR32303:SF8 32 340 2.8E-46 T 22-04-2016 R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 395 30.146 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 SMART SM00564 56 87 6.0E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 SMART SM00564 96 127 0.13 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 SMART SM00564 135 167 31.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 SMART SM00564 269 300 120.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 SMART SM00564 231 262 13.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 SMART SM00564 181 212 2.3 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 Pfam PF13360 PQQ-like domain 36 88 4.5E-5 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 Pfam PF13360 PQQ-like domain 93 299 1.5E-40 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 1 351 2.8E-99 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 Gene3D G3DSA:2.140.10.10 2 394 3.7E-55 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 PANTHER PTHR32303 32 340 2.8E-46 T 22-04-2016 R615_RS12365 a5463bd562c19c9effaed8228ece3253 397 SUPERFAMILY SSF50998 17 360 2.47E-65 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily R615_RS12190 b6230249eaef4e030c25d8833424ffa6 317 Pfam PF14397 Sugar-transfer associated ATP-grasp 20 293 3.8E-114 T 22-04-2016 R615_RS12190 b6230249eaef4e030c25d8833424ffa6 317 Gene3D G3DSA:3.30.470.20 39 161 2.1E-4 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS12190 b6230249eaef4e030c25d8833424ffa6 317 Gene3D G3DSA:3.30.470.20 162 202 5.5E-4 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 R615_RS12190 b6230249eaef4e030c25d8833424ffa6 317 SUPERFAMILY SSF56059 42 201 1.01E-19 T 22-04-2016 R615_RS12190 b6230249eaef4e030c25d8833424ffa6 317 SUPERFAMILY SSF56059 231 280 1.01E-19 T 22-04-2016 R615_RS12190 b6230249eaef4e030c25d8833424ffa6 317 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 7 316 7.3E-133 T 22-04-2016 IPR011758 Alpha-L-glutamate ligase-related protein R615_RS15440 e1d89fff9fc65dba20b4940796d07295 140 PANTHER PTHR11911 2 132 3.0E-22 T 22-04-2016 R615_RS15440 e1d89fff9fc65dba20b4940796d07295 140 SUPERFAMILY SSF54631 1 133 6.95E-27 T 22-04-2016 R615_RS15440 e1d89fff9fc65dba20b4940796d07295 140 SMART SM00116 11 59 8.0E-6 T 22-04-2016 IPR000644 CBS domain R615_RS15440 e1d89fff9fc65dba20b4940796d07295 140 SMART SM00116 86 134 1.3E-4 T 22-04-2016 IPR000644 CBS domain R615_RS15440 e1d89fff9fc65dba20b4940796d07295 140 Pfam PF00571 CBS domain 86 132 2.5E-8 T 22-04-2016 IPR000644 CBS domain R615_RS15440 e1d89fff9fc65dba20b4940796d07295 140 Pfam PF00571 CBS domain 4 56 8.3E-13 T 22-04-2016 IPR000644 CBS domain R615_RS15440 e1d89fff9fc65dba20b4940796d07295 140 Gene3D G3DSA:3.10.580.10 2 133 3.4E-26 T 22-04-2016 R615_RS08215 908c4dc985c4602c4df4b4620b860ede 144 Pfam PF00075 RNase H 3 139 4.0E-51 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 R615_RS08215 908c4dc985c4602c4df4b4620b860ede 144 Gene3D G3DSA:3.30.420.10 3 141 4.8E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS08215 908c4dc985c4602c4df4b4620b860ede 144 PANTHER PTHR10642 3 140 1.4E-58 T 22-04-2016 R615_RS08215 908c4dc985c4602c4df4b4620b860ede 144 SUPERFAMILY SSF53098 3 140 1.21E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS08215 908c4dc985c4602c4df4b4620b860ede 144 Hamap MF_00042 Ribonuclease H [rnhA]. 1 144 32.465 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 R615_RS09700 aec5a0d3ffeedc69c1c7f593f6e1d982 424 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 421 5.1E-127 T 22-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 R615_RS09700 aec5a0d3ffeedc69c1c7f593f6e1d982 424 Pfam PF00202 Aminotransferase class-III 19 414 1.0E-74 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS09700 aec5a0d3ffeedc69c1c7f593f6e1d982 424 PANTHER PTHR11986:SF61 1 424 1.8E-148 T 22-04-2016 R615_RS09700 aec5a0d3ffeedc69c1c7f593f6e1d982 424 PANTHER PTHR11986 1 424 1.8E-148 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 R615_RS09700 aec5a0d3ffeedc69c1c7f593f6e1d982 424 Gene3D G3DSA:3.40.640.10 55 321 1.5E-57 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS09700 aec5a0d3ffeedc69c1c7f593f6e1d982 424 Gene3D G3DSA:3.90.1150.10 324 415 5.8E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS09700 aec5a0d3ffeedc69c1c7f593f6e1d982 424 Gene3D G3DSA:3.90.1150.10 5 54 5.8E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS09700 aec5a0d3ffeedc69c1c7f593f6e1d982 424 SUPERFAMILY SSF53383 9 415 4.44E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS01045 1bf7f2b209a6c4f2277a5dbe0c75aa8d 110 PANTHER PTHR21256 3 110 3.5E-38 T 22-04-2016 R615_RS01045 1bf7f2b209a6c4f2277a5dbe0c75aa8d 110 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 92 20.119 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 R615_RS01045 1bf7f2b209a6c4f2277a5dbe0c75aa8d 110 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 95 3.7E-13 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 R615_RS01045 1bf7f2b209a6c4f2277a5dbe0c75aa8d 110 SUPERFAMILY SSF101386 4 98 8.07E-23 T 22-04-2016 R615_RS01045 1bf7f2b209a6c4f2277a5dbe0c75aa8d 110 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 92 1.9E-28 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 R615_RS06840 b50aa2b092634d420ced8a3b5f7d2e78 338 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 19 332 3.1E-109 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 R615_RS06840 b50aa2b092634d420ced8a3b5f7d2e78 338 PANTHER PTHR30573 1 334 3.7E-147 T 22-04-2016 R615_RS06840 b50aa2b092634d420ced8a3b5f7d2e78 338 SUPERFAMILY SSF142754 22 332 1.09E-106 T 22-04-2016 R615_RS06840 b50aa2b092634d420ced8a3b5f7d2e78 338 Pfam PF02445 Quinolinate synthetase A protein 24 331 4.3E-101 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 SUPERFAMILY SSF52172 924 1076 7.68E-29 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 Gene3D G3DSA:1.10.287.130 674 741 2.4E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 PANTHER PTHR24423 4 13 3.7E-111 T 22-04-2016 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 PANTHER PTHR24423 658 1084 3.7E-111 T 22-04-2016 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 PANTHER PTHR24423 261 298 3.7E-111 T 22-04-2016 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 SUPERFAMILY SSF55874 735 899 7.86E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 SMART SM00387 792 903 1.4E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 Pfam PF00072 Response regulator receiver domain 927 1043 4.7E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 SMART SM00388 679 745 4.0E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 PRINTS PR00344 Bacterial sensor protein C-terminal signature 887 900 2.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 PRINTS PR00344 Bacterial sensor protein C-terminal signature 863 881 2.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 PRINTS PR00344 Bacterial sensor protein C-terminal signature 828 842 2.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 PRINTS PR00344 Bacterial sensor protein C-terminal signature 846 856 2.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 Gene3D G3DSA:3.30.565.10 746 902 2.5E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 792 900 4.2E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 Gene3D G3DSA:3.40.50.2300 923 1050 4.7E-29 T 22-04-2016 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 SUPERFAMILY SSF47384 665 746 3.14E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 Pfam PF00512 His Kinase A (phospho-acceptor) domain 679 745 4.8E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS04165 64bea00dc07e248861a0c27d1bf3e434 1137 SMART SM00448 925 1043 2.1E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS08110 98504944bef71ff02c4879bf3752cc9f 335 PANTHER PTHR34322:SF2 2 301 2.7E-135 T 22-04-2016 R615_RS08110 98504944bef71ff02c4879bf3752cc9f 335 SMART SM01321 12 186 5.4E-5 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS08110 98504944bef71ff02c4879bf3752cc9f 335 Gene3D G3DSA:3.30.70.1290 134 189 2.7E-9 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS08110 98504944bef71ff02c4879bf3752cc9f 335 Gene3D G3DSA:3.30.70.1290 45 81 2.7E-9 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS08110 98504944bef71ff02c4879bf3752cc9f 335 PANTHER PTHR34322 2 301 2.7E-135 T 22-04-2016 R615_RS08110 98504944bef71ff02c4879bf3752cc9f 335 SUPERFAMILY SSF143422 16 80 1.02E-20 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS08110 98504944bef71ff02c4879bf3752cc9f 335 SUPERFAMILY SSF143422 133 191 1.02E-20 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS11110 5f1bc0ec793f0a99d5b7774724174159 337 Pfam PF01548 Transposase 7 146 9.0E-14 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 R615_RS11110 5f1bc0ec793f0a99d5b7774724174159 337 PANTHER PTHR33055:SF2 3 334 6.8E-144 T 22-04-2016 R615_RS11110 5f1bc0ec793f0a99d5b7774724174159 337 PANTHER PTHR33055 3 334 6.8E-144 T 22-04-2016 R615_RS11110 5f1bc0ec793f0a99d5b7774724174159 337 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 290 5.8E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 R615_RS05875 b878680249d6f0188d9a1b17feb2e99a 772 SMART SM00304 440 493 1.5E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS05875 b878680249d6f0188d9a1b17feb2e99a 772 PANTHER PTHR32089:SF34 387 772 3.5E-101 T 22-04-2016 R615_RS05875 b878680249d6f0188d9a1b17feb2e99a 772 Gene3D G3DSA:3.30.450.20 255 323 8.4E-4 T 22-04-2016 R615_RS05875 b878680249d6f0188d9a1b17feb2e99a 772 Gene3D G3DSA:3.30.450.20 362 414 8.4E-4 T 22-04-2016 R615_RS05875 b878680249d6f0188d9a1b17feb2e99a 772 PANTHER PTHR32089 387 772 3.5E-101 T 22-04-2016 R615_RS05875 b878680249d6f0188d9a1b17feb2e99a 772 SMART SM00283 508 769 9.9E-63 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS05875 b878680249d6f0188d9a1b17feb2e99a 772 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 566 768 5.3E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS05875 b878680249d6f0188d9a1b17feb2e99a 772 Gene3D G3DSA:1.10.287.950 522 738 3.6E-55 T 22-04-2016 R615_RS05875 b878680249d6f0188d9a1b17feb2e99a 772 SUPERFAMILY SSF58104 461 770 4.45E-64 T 22-04-2016 R615_RS05875 b878680249d6f0188d9a1b17feb2e99a 772 Pfam PF00672 HAMP domain 421 489 5.0E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 R615_RS05875 b878680249d6f0188d9a1b17feb2e99a 772 Pfam PF02743 Cache domain 37 397 1.2E-12 T 22-04-2016 IPR033479 Double Cache domain 1 R615_RS00210 0b4be8febe608ba0ae32ba31db0341a7 367 Pfam PF01636 Phosphotransferase enzyme family 39 276 5.1E-43 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase R615_RS00210 0b4be8febe608ba0ae32ba31db0341a7 367 PANTHER PTHR21310:SF14 4 279 8.3E-20 T 22-04-2016 R615_RS00210 0b4be8febe608ba0ae32ba31db0341a7 367 PANTHER PTHR21310 4 279 8.3E-20 T 22-04-2016 R615_RS00210 0b4be8febe608ba0ae32ba31db0341a7 367 SUPERFAMILY SSF56112 18 344 6.96E-59 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS00210 0b4be8febe608ba0ae32ba31db0341a7 367 Gene3D G3DSA:3.90.1200.10 144 342 2.9E-38 T 22-04-2016 R615_RS02985 fe098fafd8e0bc44f9d242f9657f503c 236 PANTHER PTHR30055 14 83 4.7E-17 T 22-04-2016 R615_RS02985 fe098fafd8e0bc44f9d242f9657f503c 236 SUPERFAMILY SSF46689 20 100 7.18E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS02985 fe098fafd8e0bc44f9d242f9657f503c 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 75 1.3E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS02985 fe098fafd8e0bc44f9d242f9657f503c 236 PANTHER PTHR30055:SF91 14 83 4.7E-17 T 22-04-2016 R615_RS02985 fe098fafd8e0bc44f9d242f9657f503c 236 Gene3D G3DSA:1.10.357.10 25 229 2.1E-25 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS09730 0c7ec650531b61501b0f8c6392ce7848 146 Pfam PF00582 Universal stress protein family 2 141 1.0E-26 T 22-04-2016 IPR006016 UspA GO:0006950 R615_RS09730 0c7ec650531b61501b0f8c6392ce7848 146 PRINTS PR01438 Universal stress protein signature 101 113 5.4E-12 T 22-04-2016 IPR006015 Universal stress protein A R615_RS09730 0c7ec650531b61501b0f8c6392ce7848 146 PRINTS PR01438 Universal stress protein signature 119 141 5.4E-12 T 22-04-2016 IPR006015 Universal stress protein A R615_RS09730 0c7ec650531b61501b0f8c6392ce7848 146 PIRSF PIRSF006276 1 144 5.2E-22 T 22-04-2016 IPR006015 Universal stress protein A R615_RS09730 0c7ec650531b61501b0f8c6392ce7848 146 Gene3D G3DSA:3.40.50.620 2 143 2.8E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS09730 0c7ec650531b61501b0f8c6392ce7848 146 SUPERFAMILY SSF52402 1 143 1.76E-34 T 22-04-2016 R615_RS09730 0c7ec650531b61501b0f8c6392ce7848 146 PANTHER PTHR31964 1 141 9.2E-28 T 22-04-2016 R615_RS02445 258fd81f4d253d3d1e6a339c26b5c403 84 SUPERFAMILY SSF50182 7 69 1.93E-24 T 22-04-2016 IPR010920 LSM domain R615_RS02445 258fd81f4d253d3d1e6a339c26b5c403 84 Gene3D G3DSA:2.30.30.100 1 70 4.3E-37 T 22-04-2016 R615_RS02445 258fd81f4d253d3d1e6a339c26b5c403 84 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 64 27.485 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 R615_RS02445 258fd81f4d253d3d1e6a339c26b5c403 84 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 64 1.9E-30 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 R615_RS02445 258fd81f4d253d3d1e6a339c26b5c403 84 PANTHER PTHR34772:SF1 1 84 1.2E-40 T 22-04-2016 R615_RS02445 258fd81f4d253d3d1e6a339c26b5c403 84 PANTHER PTHR34772 1 84 1.2E-40 T 22-04-2016 R615_RS09430 c65af99fc955de5b01553b92640addc7 198 Pfam PF16036 Chalcone isomerase-like 27 196 3.2E-45 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 R615_RS09430 c65af99fc955de5b01553b92640addc7 198 SUPERFAMILY SSF54626 38 196 1.31E-13 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 R615_RS04600 8d4c1150f8ebfa2d2595de865798a276 217 PANTHER PTHR36307 68 216 2.3E-29 T 22-04-2016 R615_RS04600 8d4c1150f8ebfa2d2595de865798a276 217 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 82 216 3.4E-37 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal R615_RS04600 8d4c1150f8ebfa2d2595de865798a276 217 Gene3D G3DSA:3.90.1210.10 100 156 6.7E-5 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal R615_RS04600 8d4c1150f8ebfa2d2595de865798a276 217 Pfam PF13144 Chaperone for flagella basal body P-ring formation 32 216 5.4E-42 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal R615_RS04600 8d4c1150f8ebfa2d2595de865798a276 217 SMART SM00858 93 155 6.2E-9 T 22-04-2016 IPR013974 SAF domain R615_RS10660 1b8ec5dcce5ea3f157ebfe4292e2c016 221 SUPERFAMILY SSF51182 3 130 7.47E-36 T 22-04-2016 IPR011051 RmlC-like cupin domain R615_RS10660 1b8ec5dcce5ea3f157ebfe4292e2c016 221 Pfam PF12973 ChrR Cupin-like domain 129 215 8.1E-33 T 22-04-2016 IPR025979 ChrR-like cupin domain R615_RS10660 1b8ec5dcce5ea3f157ebfe4292e2c016 221 Pfam PF12973 ChrR Cupin-like domain 19 109 1.5E-38 T 22-04-2016 IPR025979 ChrR-like cupin domain R615_RS10660 1b8ec5dcce5ea3f157ebfe4292e2c016 221 SUPERFAMILY SSF51182 120 219 1.74E-26 T 22-04-2016 IPR011051 RmlC-like cupin domain R615_RS10660 1b8ec5dcce5ea3f157ebfe4292e2c016 221 Gene3D G3DSA:2.60.120.10 129 219 2.7E-29 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS10660 1b8ec5dcce5ea3f157ebfe4292e2c016 221 Gene3D G3DSA:2.60.120.10 17 128 2.7E-40 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS16300 017f341cac6a29edcf7592cb6676e752 261 PANTHER PTHR35936 4 258 3.8E-32 T 22-04-2016 R615_RS16300 017f341cac6a29edcf7592cb6676e752 261 Gene3D G3DSA:3.40.190.10 27 102 1.3E-9 T 22-04-2016 R615_RS16300 017f341cac6a29edcf7592cb6676e752 261 Gene3D G3DSA:3.40.190.10 207 247 1.3E-9 T 22-04-2016 R615_RS16300 017f341cac6a29edcf7592cb6676e752 261 SUPERFAMILY SSF53850 18 247 2.99E-29 T 22-04-2016 R615_RS16300 017f341cac6a29edcf7592cb6676e752 261 PANTHER PTHR35936:SF3 4 258 3.8E-32 T 22-04-2016 R615_RS16300 017f341cac6a29edcf7592cb6676e752 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 247 1.9E-16 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF R615_RS01705 3d49e93427ee49751432973f414c3297 610 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 7 609 8.9E-199 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like R615_RS01705 3d49e93427ee49751432973f414c3297 610 PANTHER PTHR35370:SF1 2 610 1.4E-148 T 22-04-2016 R615_RS01705 3d49e93427ee49751432973f414c3297 610 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 610 1.9E-192 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like R615_RS01705 3d49e93427ee49751432973f414c3297 610 PIRSF PIRSF028304 1 609 1.5E-167 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like R615_RS01705 3d49e93427ee49751432973f414c3297 610 PANTHER PTHR35370 2 610 1.4E-148 T 22-04-2016 R615_RS04845 9aa127c13b352c62f0698dbb2657a6e8 186 SUPERFAMILY SSF51182 1 182 3.2E-74 T 22-04-2016 IPR011051 RmlC-like cupin domain R615_RS04845 9aa127c13b352c62f0698dbb2657a6e8 186 Gene3D G3DSA:2.60.120.10 1 183 7.8E-79 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS04845 9aa127c13b352c62f0698dbb2657a6e8 186 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 180 6.0E-62 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 R615_RS04845 9aa127c13b352c62f0698dbb2657a6e8 186 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 180 2.8E-70 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 R615_RS04845 9aa127c13b352c62f0698dbb2657a6e8 186 PANTHER PTHR21047 1 180 3.2E-74 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 R615_RS04845 9aa127c13b352c62f0698dbb2657a6e8 186 PANTHER PTHR21047:SF2 1 180 3.2E-74 T 22-04-2016 R615_RS04845 9aa127c13b352c62f0698dbb2657a6e8 186 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 180 9.4E-71 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 R615_RS10355 093dc639e0d1e406945f43470ae1d483 304 Gene3D G3DSA:3.30.420.10 131 290 6.4E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS10355 093dc639e0d1e406945f43470ae1d483 304 Pfam PF00665 Integrase core domain 137 251 9.1E-30 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 R615_RS10355 093dc639e0d1e406945f43470ae1d483 304 PANTHER PTHR32552 24 303 1.4E-67 T 22-04-2016 R615_RS10355 093dc639e0d1e406945f43470ae1d483 304 SUPERFAMILY SSF53098 130 293 4.1E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS10355 093dc639e0d1e406945f43470ae1d483 304 Pfam PF13276 HTH-like domain 60 108 1.4E-11 T 22-04-2016 IPR025948 HTH-like domain R615_RS13690 618cb90c13bc8d3896e8bb139dded9ee 64 Gene3D G3DSA:3.30.50.10 2 55 4.3E-24 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 R615_RS13690 618cb90c13bc8d3896e8bb139dded9ee 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 59 17.108 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 R615_RS13690 618cb90c13bc8d3896e8bb139dded9ee 64 SUPERFAMILY SSF57716 2 51 6.84E-20 T 22-04-2016 R615_RS13690 618cb90c13bc8d3896e8bb139dded9ee 64 PANTHER PTHR36150 1 61 1.5E-19 T 22-04-2016 R615_RS13690 618cb90c13bc8d3896e8bb139dded9ee 64 Pfam PF03884 Domain of unknown function (DUF329) 3 50 4.8E-25 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 R615_RS13690 618cb90c13bc8d3896e8bb139dded9ee 64 PANTHER PTHR36150:SF1 1 61 1.5E-19 T 22-04-2016 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 SUPERFAMILY SSF82693 42 131 2.14E-12 T 22-04-2016 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 SUPERFAMILY SSF82714 180 260 6.67E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 Gene3D G3DSA:3.30.2090.10 179 259 1.8E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 PANTHER PTHR32063:SF33 1 1035 3.5E-249 T 22-04-2016 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 Gene3D G3DSA:1.10.3850.10 807 1025 7.8E-47 T 22-04-2016 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 Gene3D G3DSA:3.30.70.1430 43 131 3.6E-14 T 22-04-2016 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 Gene3D G3DSA:1.10.10.620 1040 1086 3.5E-6 T 22-04-2016 IPR023200 Ribosome modulation factor-like domain R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 Gene3D G3DSA:3.30.2090.10 725 800 7.9E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 SUPERFAMILY SSF82714 725 800 5.75E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 SUPERFAMILY SSF82866 799 1027 6.67E-43 T 22-04-2016 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 Pfam PF00873 AcrB/AcrD/AcrF family 6 1023 3.3E-149 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 Gene3D G3DSA:1.20.1640.10 286 489 1.1E-43 T 22-04-2016 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 PRINTS PR00702 Acriflavin resistance protein family signature 379 403 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 PRINTS PR00702 Acriflavin resistance protein family signature 457 480 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 PRINTS PR00702 Acriflavin resistance protein family signature 325 348 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 PRINTS PR00702 Acriflavin resistance protein family signature 432 455 2.4E-25 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 SUPERFAMILY SSF82866 288 481 4.97E-36 T 22-04-2016 R615_RS15495 bb72a554bac0be4014d783766e1a9895 1088 PANTHER PTHR32063 1 1035 3.5E-249 T 22-04-2016 R615_RS13360 4448eb8116a52f1d953196b5d929444c 418 PANTHER PTHR10283:SF91 6 401 3.7E-44 T 22-04-2016 R615_RS13360 4448eb8116a52f1d953196b5d929444c 418 Pfam PF03600 Citrate transporter 14 363 7.6E-26 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 R615_RS13360 4448eb8116a52f1d953196b5d929444c 418 PANTHER PTHR10283 6 401 3.7E-44 T 22-04-2016 R615_RS02885 9ca261f74c78b65b0399266ab16489d9 205 PANTHER PTHR12608 19 203 5.4E-33 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 R615_RS02885 9ca261f74c78b65b0399266ab16489d9 205 Pfam PF01169 Uncharacterized protein family UPF0016 20 99 8.2E-19 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 R615_RS02885 9ca261f74c78b65b0399266ab16489d9 205 Pfam PF01169 Uncharacterized protein family UPF0016 123 197 7.5E-21 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 R615_RS00065 6abc9579c8bd7e99add96461ed71f430 61 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 57 3.1E-14 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal R615_RS04425 c6fb993cef41ea4c7df1681e53cfc98e 936 Gene3D G3DSA:2.120.10.30 367 547 3.2E-16 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like R615_RS04425 c6fb993cef41ea4c7df1681e53cfc98e 936 SUPERFAMILY SSF82171 305 532 2.88E-14 T 22-04-2016 R615_RS01110 d17bbee48eb7901c8d57d46e5785e614 216 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 35 195 5.5E-25 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain R615_RS01110 d17bbee48eb7901c8d57d46e5785e614 216 SUPERFAMILY SSF52266 30 210 8.03E-48 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain R615_RS01110 d17bbee48eb7901c8d57d46e5785e614 216 PANTHER PTHR30383 25 209 6.2E-44 T 22-04-2016 R615_RS01110 d17bbee48eb7901c8d57d46e5785e614 216 Gene3D G3DSA:3.40.50.1110 30 211 1.2E-51 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain R615_RS01110 d17bbee48eb7901c8d57d46e5785e614 216 PANTHER PTHR30383:SF5 25 209 6.2E-44 T 22-04-2016 R615_RS15395 8b4ac6c804f0c30b1e182edc2430c4e8 344 Gene3D G3DSA:3.40.50.300 1 191 8.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS15395 8b4ac6c804f0c30b1e182edc2430c4e8 344 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 171 4.5E-39 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain R615_RS15395 8b4ac6c804f0c30b1e182edc2430c4e8 344 PANTHER PTHR13748 241 343 2.4E-59 T 22-04-2016 R615_RS15395 8b4ac6c804f0c30b1e182edc2430c4e8 344 PANTHER PTHR13748 1 205 2.4E-59 T 22-04-2016 R615_RS15395 8b4ac6c804f0c30b1e182edc2430c4e8 344 SUPERFAMILY SSF52540 3 164 1.36E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13150 b08d1b9150327a9a46fa581bba5158c3 84 Pfam PF04999 Cell division protein FtsL 7 81 1.4E-14 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 R615_RS11365 fa00957322b8b5552f4046e21ca52997 171 PANTHER PTHR37816 2 107 2.8E-18 T 22-04-2016 R615_RS11365 fa00957322b8b5552f4046e21ca52997 171 PANTHER PTHR37816:SF1 2 107 2.8E-18 T 22-04-2016 R615_RS11365 fa00957322b8b5552f4046e21ca52997 171 SUPERFAMILY SSF52540 1 105 1.43E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS11365 fa00957322b8b5552f4046e21ca52997 171 Gene3D G3DSA:3.40.50.300 1 89 3.6E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 Gene3D G3DSA:3.30.565.10 163 311 9.6E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 207 310 2.1E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 Pfam PF00512 His Kinase A (phospho-acceptor) domain 60 163 2.4E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 SMART SM00387 203 311 3.4E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 PRINTS PR00344 Bacterial sensor protein C-terminal signature 258 268 1.6E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 289 1.6E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 308 1.6E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 PRINTS PR00344 Bacterial sensor protein C-terminal signature 240 254 1.6E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 PANTHER PTHR24423:SF497 55 88 5.3E-76 T 22-04-2016 R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 PANTHER PTHR24423:SF497 1 23 5.3E-76 T 22-04-2016 R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 PANTHER PTHR24423:SF497 127 311 5.3E-76 T 22-04-2016 R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 SUPERFAMILY SSF55874 153 309 1.3E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 PANTHER PTHR24423 55 88 5.3E-76 T 22-04-2016 R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 PANTHER PTHR24423 1 23 5.3E-76 T 22-04-2016 R615_RS05420 08bf42bade5c5b1f99bdf058bea1901e 313 PANTHER PTHR24423 127 311 5.3E-76 T 22-04-2016 R615_RS06670 84da4db19e2e14c3b4fc7e240220771e 398 PANTHER PTHR30572 1 398 1.9E-76 T 22-04-2016 R615_RS06670 84da4db19e2e14c3b4fc7e240220771e 398 Pfam PF12704 MacB-like periplasmic core domain 21 239 2.5E-34 T 22-04-2016 IPR025857 MacB-like periplasmic core domain R615_RS06670 84da4db19e2e14c3b4fc7e240220771e 398 Pfam PF02687 FtsX-like permease family 278 391 2.3E-17 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 R615_RS01410 a317d9a7b9e366c0084920aac559001a 141 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 2 141 6.5E-46 T 22-04-2016 IPR014351 Conserved hypothetical protein CHP00701 R615_RS01410 a317d9a7b9e366c0084920aac559001a 141 PANTHER PTHR40255 1 141 8.0E-56 T 22-04-2016 R615_RS01410 a317d9a7b9e366c0084920aac559001a 141 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 141 3.9E-54 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 R615_RS01410 a317d9a7b9e366c0084920aac559001a 141 PIRSF PIRSF004638 1 141 2.3E-56 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 R615_RS09355 1c5f4a54deca59db3bde651753c80954 393 Pfam PF05762 VWA domain containing CoxE-like protein 187 275 8.2E-8 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like R615_RS10650 4c6efff06953181d96873eecd09760fb 191 Pfam PF08378 Nuclease-related domain 32 147 1.8E-27 T 22-04-2016 IPR011528 Nuclease-related domain, NERD R615_RS04520 edea837a2d3e58275be0107c4b2fc6a9 223 SUPERFAMILY SSF46689 14 83 4.46E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS04520 edea837a2d3e58275be0107c4b2fc6a9 223 SUPERFAMILY SSF48498 98 219 1.07E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal R615_RS04520 edea837a2d3e58275be0107c4b2fc6a9 223 PANTHER PTHR30055:SF73 7 179 4.0E-14 T 22-04-2016 R615_RS04520 edea837a2d3e58275be0107c4b2fc6a9 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 7.9E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS04520 edea837a2d3e58275be0107c4b2fc6a9 223 Gene3D G3DSA:1.10.357.10 13 191 1.3E-24 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS04520 edea837a2d3e58275be0107c4b2fc6a9 223 PANTHER PTHR30055 7 179 4.0E-14 T 22-04-2016 R615_RS01695 0ece16eb8559c1de497db8a214598be1 523 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 85 515 5.9E-166 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath R615_RS01695 0ece16eb8559c1de497db8a214598be1 523 PANTHER PTHR35565 83 521 4.5E-142 T 22-04-2016 R615_RS01695 0ece16eb8559c1de497db8a214598be1 523 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 68 515 1.2E-140 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath R615_RS01695 0ece16eb8559c1de497db8a214598be1 523 PANTHER PTHR35565:SF3 83 521 4.5E-142 T 22-04-2016 R615_RS13730 3e78728993ab1f1474d932679b99f59b 335 SUPERFAMILY SSF52540 2 207 2.58E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13730 3e78728993ab1f1474d932679b99f59b 335 SUPERFAMILY SSF48019 209 327 5.1E-25 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 R615_RS13730 3e78728993ab1f1474d932679b99f59b 335 PANTHER PTHR34388 1 322 1.8E-64 T 22-04-2016 R615_RS13730 3e78728993ab1f1474d932679b99f59b 335 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 328 2.1E-8 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 R615_RS13730 3e78728993ab1f1474d932679b99f59b 335 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 325 5.9E-87 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 R615_RS13730 3e78728993ab1f1474d932679b99f59b 335 Gene3D G3DSA:1.20.272.20 221 330 1.8E-29 T 22-04-2016 R615_RS13730 3e78728993ab1f1474d932679b99f59b 335 Gene3D G3DSA:3.40.50.300 2 138 2.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS13730 3e78728993ab1f1474d932679b99f59b 335 Gene3D G3DSA:1.10.8.60 141 220 2.1E-24 T 22-04-2016 R615_RS13730 3e78728993ab1f1474d932679b99f59b 335 Pfam PF06144 DNA polymerase III, delta subunit 20 188 7.1E-30 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 R615_RS17255 018815cf46b8b0d41f3e7bca7953b822 1191 Pfam PF05567 Neisseria PilC beta-propeller domain 698 948 1.6E-19 T 22-04-2016 IPR008707 PilC beta-propeller domain R615_RS17255 018815cf46b8b0d41f3e7bca7953b822 1191 SUPERFAMILY SSF50998 664 970 5.41E-8 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily R615_RS17255 018815cf46b8b0d41f3e7bca7953b822 1191 SUPERFAMILY SSF50998 1073 1086 5.41E-8 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily R615_RS02635 404a1df9f086a9a453df5fe4f52ee3c7 113 SUPERFAMILY SSF141571 32 92 6.15E-17 T 22-04-2016 R615_RS02635 404a1df9f086a9a453df5fe4f52ee3c7 113 Pfam PF00805 Pentapeptide repeats (8 copies) 54 90 7.3E-11 T 22-04-2016 IPR001646 Pentapeptide repeat R615_RS02635 404a1df9f086a9a453df5fe4f52ee3c7 113 PIRSF PIRSF029688 1 113 1.8E-42 T 22-04-2016 IPR016933 Pentapeptide repeat-containing uncharacterised conserved protein UCP029688 R615_RS10705 064a5f5aff8e782bac389e8a406595c8 222 PANTHER PTHR23291 5 222 7.7E-77 T 22-04-2016 IPR006214 Bax inhibitor 1-related R615_RS10705 064a5f5aff8e782bac389e8a406595c8 222 PANTHER PTHR23291:SF37 5 222 7.7E-77 T 22-04-2016 R615_RS10705 064a5f5aff8e782bac389e8a406595c8 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 215 5.0E-40 T 22-04-2016 R615_RS10435 c1cf078d1f527eac6b7fb126fc1e9557 203 Pfam PF12915 Protein of unknown function (DUF3833) 27 192 4.2E-52 T 22-04-2016 IPR024409 Protein of unknown function DUF3833 R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 SUPERFAMILY SSF47384 126 186 9.81E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 Gene3D G3DSA:3.30.565.10 191 348 6.7E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 Pfam PF00512 His Kinase A (phospho-acceptor) domain 126 182 1.2E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 SMART SM00387 232 347 1.3E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 SMART SM00388 124 188 9.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 Gene3D G3DSA:1.10.287.130 125 182 1.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 PANTHER PTHR24423 126 348 2.6E-56 T 22-04-2016 R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 307 325 6.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 301 6.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 344 6.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 287 6.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 SUPERFAMILY SSF55874 181 345 3.01E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17380 bd3fecc8dcea54a348789d8e186103ff 355 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 345 3.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS13040 f0bd90b1a4a5688fa130ae0b686c8725 157 Gene3D G3DSA:3.40.390.30 18 155 1.2E-49 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 R615_RS13040 f0bd90b1a4a5688fa130ae0b686c8725 157 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 42 146 6.0E-38 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 R615_RS13040 f0bd90b1a4a5688fa130ae0b686c8725 157 SUPERFAMILY SSF55486 22 152 4.15E-49 T 22-04-2016 R615_RS13040 f0bd90b1a4a5688fa130ae0b686c8725 157 Pfam PF02130 Uncharacterized protein family UPF0054 21 145 2.2E-39 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 R615_RS13040 f0bd90b1a4a5688fa130ae0b686c8725 157 PANTHER PTHR22881 1 155 1.1E-55 T 22-04-2016 R615_RS13040 f0bd90b1a4a5688fa130ae0b686c8725 157 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 3 150 24.547 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 R615_RS13040 f0bd90b1a4a5688fa130ae0b686c8725 157 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 116 126 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site R615_RS17315 001d107198b4094b5495c04a7db678e2 119 PANTHER PTHR37166 44 119 7.2E-17 T 22-04-2016 R615_RS17315 001d107198b4094b5495c04a7db678e2 119 Gene3D G3DSA:3.30.160.170 36 108 7.3E-20 T 22-04-2016 IPR005186 FlaG protein R615_RS17315 001d107198b4094b5495c04a7db678e2 119 Pfam PF03646 FlaG protein 31 114 9.3E-19 T 22-04-2016 IPR005186 FlaG protein R615_RS17315 001d107198b4094b5495c04a7db678e2 119 SUPERFAMILY SSF160214 40 109 2.09E-19 T 22-04-2016 IPR005186 FlaG protein R615_RS17315 001d107198b4094b5495c04a7db678e2 119 PANTHER PTHR37166:SF1 44 119 7.2E-17 T 22-04-2016 R615_RS10805 521e0d1de528b1e61fdaf37e05c0aa33 223 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 19 150 2.0E-15 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 R615_RS10805 521e0d1de528b1e61fdaf37e05c0aa33 223 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 20 221 4.2E-42 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 R615_RS13165 8e611ee7345696ff6fc064ebbb7ef5b6 221 PANTHER PTHR31876:SF1 1 218 4.4E-31 T 22-04-2016 R615_RS13165 8e611ee7345696ff6fc064ebbb7ef5b6 221 PANTHER PTHR31876 1 218 4.4E-31 T 22-04-2016 R615_RS13165 8e611ee7345696ff6fc064ebbb7ef5b6 221 Pfam PF04367 Protein of unknown function (DUF502) 56 160 7.3E-21 T 22-04-2016 IPR007462 Protein of unknown function DUF502 R615_RS05690 ce391bc345b922be6aaf05737e8d1834 297 SUPERFAMILY SSF46785 1 111 9.08E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05690 ce391bc345b922be6aaf05737e8d1834 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 9.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 R615_RS05690 ce391bc345b922be6aaf05737e8d1834 297 SUPERFAMILY SSF53850 90 294 4.64E-41 T 22-04-2016 R615_RS05690 ce391bc345b922be6aaf05737e8d1834 297 PANTHER PTHR30126 3 292 2.2E-96 T 22-04-2016 R615_RS05690 ce391bc345b922be6aaf05737e8d1834 297 PANTHER PTHR30126:SF36 3 292 2.2E-96 T 22-04-2016 R615_RS05690 ce391bc345b922be6aaf05737e8d1834 297 Gene3D G3DSA:3.40.190.10 88 231 3.9E-30 T 22-04-2016 R615_RS05690 ce391bc345b922be6aaf05737e8d1834 297 Gene3D G3DSA:1.10.10.10 4 86 1.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS05690 ce391bc345b922be6aaf05737e8d1834 297 Pfam PF03466 LysR substrate binding domain 88 294 7.6E-46 T 22-04-2016 IPR005119 LysR, substrate-binding R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 Gene3D G3DSA:3.40.50.300 26 137 5.5E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 Gene3D G3DSA:3.40.50.300 222 265 5.5E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 PANTHER PTHR11472:SF32 1 695 2.0E-203 T 22-04-2016 R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 Pfam PF00270 DEAD/DEAH box helicase 56 158 1.8E-6 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 SUPERFAMILY SSF52540 460 474 8.91E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 SUPERFAMILY SSF52540 205 278 8.91E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 SUPERFAMILY SSF52540 54 105 8.91E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 SUPERFAMILY SSF52540 502 671 8.91E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 Pfam PF13307 Helicase C-terminal domain 537 692 9.8E-30 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 PANTHER PTHR11472 1 695 2.0E-203 T 22-04-2016 R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 SMART SM00487 21 316 0.0034 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 Gene3D G3DSA:3.40.50.300 584 673 1.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS08010 e84a6cd90d48742c1e48b852fb45863a 697 SMART SM00491 546 679 4.9E-26 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 R615_RS01200 c2ee91befcd50eb0e2552898a6e9de6a 153 Gene3D G3DSA:3.30.420.140 12 147 8.1E-42 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 R615_RS01200 c2ee91befcd50eb0e2552898a6e9de6a 153 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 11 146 23.051 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 R615_RS01200 c2ee91befcd50eb0e2552898a6e9de6a 153 SUPERFAMILY SSF53098 11 142 1.29E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS01200 c2ee91befcd50eb0e2552898a6e9de6a 153 SMART SM00732 11 111 1.2E-26 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 R615_RS01200 c2ee91befcd50eb0e2552898a6e9de6a 153 Pfam PF03652 Holliday junction resolvase 13 142 9.1E-39 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 R615_RS01200 c2ee91befcd50eb0e2552898a6e9de6a 153 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 14 142 6.7E-39 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 R615_RS01200 c2ee91befcd50eb0e2552898a6e9de6a 153 PANTHER PTHR33317 13 142 1.2E-36 T 22-04-2016 R615_RS02270 06496febd085bc9f18cb4e802517db4b 298 Pfam PF04018 Domain of unknown function (DUF368) 13 256 3.2E-90 T 22-04-2016 IPR007163 Protein of unknown function DUF368 R615_RS02270 06496febd085bc9f18cb4e802517db4b 298 PANTHER PTHR37308 1 298 1.3E-69 T 22-04-2016 R615_RS12845 8bde16bda3e6f9f57527d8ae70b354ee 323 Gene3D G3DSA:1.25.40.10 21 153 6.7E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS12845 8bde16bda3e6f9f57527d8ae70b354ee 323 SUPERFAMILY SSF81901 28 148 2.88E-14 T 22-04-2016 R615_RS05415 86b34274503ae543dea365e2cb34b390 184 Gene3D G3DSA:3.90.1520.10 1 178 3.7E-52 T 22-04-2016 R615_RS05415 86b34274503ae543dea365e2cb34b390 184 Pfam PF07700 Haem-NO-binding 2 156 4.3E-42 T 22-04-2016 IPR011644 Heme-NO binding GO:0020037 KEGG: 00230+4.6.1.2 R615_RS05415 86b34274503ae543dea365e2cb34b390 184 SUPERFAMILY SSF111126 1 177 5.75E-48 T 22-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain R615_RS06515 694b69df3a647756cb9fd544f7096f71 531 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 72 224 5.0E-9 T 22-04-2016 R615_RS16735 87da50d748fb19fdd7458b4dbcce5e2d 152 Pfam PF13511 Domain of unknown function (DUF4124) 54 98 2.1E-9 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 R615_RS00535 b087adbaa66a7574e00dce74701e905f 444 PANTHER PTHR24286 50 221 2.8E-36 T 22-04-2016 R615_RS00535 b087adbaa66a7574e00dce74701e905f 444 PANTHER PTHR24286 237 436 2.8E-36 T 22-04-2016 R615_RS00535 b087adbaa66a7574e00dce74701e905f 444 Pfam PF00067 Cytochrome P450 269 415 7.7E-10 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 R615_RS00535 b087adbaa66a7574e00dce74701e905f 444 SUPERFAMILY SSF48264 25 160 3.41E-39 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 R615_RS00535 b087adbaa66a7574e00dce74701e905f 444 SUPERFAMILY SSF48264 203 417 3.41E-39 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 R615_RS00535 b087adbaa66a7574e00dce74701e905f 444 PANTHER PTHR24286:SF32 50 221 2.8E-36 T 22-04-2016 R615_RS00535 b087adbaa66a7574e00dce74701e905f 444 PANTHER PTHR24286:SF32 237 436 2.8E-36 T 22-04-2016 R615_RS00535 b087adbaa66a7574e00dce74701e905f 444 Gene3D G3DSA:1.10.630.10 9 423 1.5E-46 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 4.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 4.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 4.9E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 Gene3D G3DSA:3.40.50.720 2 223 4.5E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 PANTHER PTHR24322 145 177 2.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 PANTHER PTHR24322 6 129 2.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 2.3E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.3E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 2.3E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.3E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.3E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 SUPERFAMILY SSF51735 1 223 3.08E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS07150 77ecc32f735858cdf2f610cc7852ee00 223 Pfam PF00106 short chain dehydrogenase 3 183 5.4E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS10450 53ed8b409b987f81d71425536986c112 399 SUPERFAMILY SSF50969 19 249 4.47E-9 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like R615_RS00700 87f9b80d5fbcb99d489647e56899cd83 458 PIRSF PIRSF006066 4 458 1.1E-67 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 R615_RS00700 87f9b80d5fbcb99d489647e56899cd83 458 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 448 1.5E-89 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit R615_RS00700 87f9b80d5fbcb99d489647e56899cd83 458 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 453 3.6E-98 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 R615_RS00700 87f9b80d5fbcb99d489647e56899cd83 458 PANTHER PTHR33362 3 170 1.1E-167 T 22-04-2016 R615_RS00700 87f9b80d5fbcb99d489647e56899cd83 458 PANTHER PTHR33362 191 453 1.1E-167 T 22-04-2016 R615_RS00700 87f9b80d5fbcb99d489647e56899cd83 458 PANTHER PTHR33362:SF7 3 170 1.1E-167 T 22-04-2016 R615_RS00700 87f9b80d5fbcb99d489647e56899cd83 458 PANTHER PTHR33362:SF7 191 453 1.1E-167 T 22-04-2016 R615_RS09250 8a72961a99ded39af8efdacc26a8a3c1 257 PANTHER PTHR30269 1 256 1.1E-55 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 R615_RS09250 8a72961a99ded39af8efdacc26a8a3c1 257 PANTHER PTHR30269:SF2 1 256 1.1E-55 T 22-04-2016 R615_RS09250 8a72961a99ded39af8efdacc26a8a3c1 257 Pfam PF01925 Sulfite exporter TauE/SafE 7 253 1.5E-47 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 R615_RS05930 7cae159cef6b8c8e7452667387647792 293 Pfam PF16234 Domain of unknown function (DUF4892) 61 177 2.3E-15 T 22-04-2016 IPR032608 Protein of unknown function DUF4892 R615_RS17710 2d1e3100bd66b525a2ceb3e0cd9b5770 564 Pfam PF04820 Tryptophan halogenase 114 333 5.1E-7 T 22-04-2016 IPR006905 Tryptophan halogenase R615_RS17710 2d1e3100bd66b525a2ceb3e0cd9b5770 564 SUPERFAMILY SSF51905 307 374 3.71E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS17710 2d1e3100bd66b525a2ceb3e0cd9b5770 564 SUPERFAMILY SSF51905 13 192 3.71E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS17710 2d1e3100bd66b525a2ceb3e0cd9b5770 564 Gene3D G3DSA:3.50.50.60 11 191 3.4E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS17710 2d1e3100bd66b525a2ceb3e0cd9b5770 564 Gene3D G3DSA:3.50.50.60 302 337 3.4E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS17710 2d1e3100bd66b525a2ceb3e0cd9b5770 564 PANTHER PTHR10617:SF111 15 465 1.6E-36 T 22-04-2016 R615_RS17710 2d1e3100bd66b525a2ceb3e0cd9b5770 564 PANTHER PTHR10617 15 465 1.6E-36 T 22-04-2016 R615_RS01105 e8a7f0cf30137f49ac59f25588096ff1 177 PIRSF PIRSF036893 1 177 3.7E-40 T 22-04-2016 IPR022271 Lipocalin, ApoD type R615_RS01105 e8a7f0cf30137f49ac59f25588096ff1 177 PANTHER PTHR10612 5 176 3.5E-37 T 22-04-2016 R615_RS01105 e8a7f0cf30137f49ac59f25588096ff1 177 SUPERFAMILY SSF50814 14 176 1.94E-33 T 22-04-2016 IPR011038 Calycin-like R615_RS01105 e8a7f0cf30137f49ac59f25588096ff1 177 PRINTS PR01171 Bacterial lipocalin signature 65 74 4.2E-9 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 R615_RS01105 e8a7f0cf30137f49ac59f25588096ff1 177 PRINTS PR01171 Bacterial lipocalin signature 29 43 4.2E-9 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 R615_RS01105 e8a7f0cf30137f49ac59f25588096ff1 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 4.2E-9 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 R615_RS01105 e8a7f0cf30137f49ac59f25588096ff1 177 PRINTS PR01171 Bacterial lipocalin signature 46 62 4.2E-9 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 R615_RS01105 e8a7f0cf30137f49ac59f25588096ff1 177 Gene3D G3DSA:2.40.128.20 5 175 2.2E-43 T 22-04-2016 IPR012674 Calycin R615_RS01105 e8a7f0cf30137f49ac59f25588096ff1 177 Pfam PF08212 Lipocalin-like domain 29 174 5.8E-33 T 22-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain R615_RS15490 92ef5533efa4470900490fd6bf9813a0 384 SUPERFAMILY SSF111369 59 301 7.72E-18 T 22-04-2016 R615_RS15490 92ef5533efa4470900490fd6bf9813a0 384 PANTHER PTHR30469 1 373 3.1E-29 T 22-04-2016 R615_RS15490 92ef5533efa4470900490fd6bf9813a0 384 Gene3D G3DSA:2.40.50.100 71 103 8.1E-11 T 22-04-2016 R615_RS15490 92ef5533efa4470900490fd6bf9813a0 384 Gene3D G3DSA:2.40.50.100 175 206 8.1E-11 T 22-04-2016 R615_RS15490 92ef5533efa4470900490fd6bf9813a0 384 PANTHER PTHR30469:SF15 1 373 3.1E-29 T 22-04-2016 R615_RS15490 92ef5533efa4470900490fd6bf9813a0 384 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 373 8.4E-36 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 R615_RS15490 92ef5533efa4470900490fd6bf9813a0 384 Pfam PF13437 HlyD family secretion protein 177 227 1.1E-5 T 22-04-2016 R615_RS14725 c0189ec4e66131e5c23c63514debdec5 217 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 13 209 3.0E-77 T 22-04-2016 IPR008517 Protein of unknown function DUF799 R615_RS01125 7c5b5632c98514b206cc0e35b34fdf0a 634 PANTHER PTHR10120 1 47 3.3E-51 T 22-04-2016 R615_RS01125 7c5b5632c98514b206cc0e35b34fdf0a 634 PANTHER PTHR10120 63 340 3.3E-51 T 22-04-2016 R615_RS01125 7c5b5632c98514b206cc0e35b34fdf0a 634 PANTHER PTHR10120:SF19 1 47 3.3E-51 T 22-04-2016 R615_RS01125 7c5b5632c98514b206cc0e35b34fdf0a 634 PANTHER PTHR10120:SF19 63 340 3.3E-51 T 22-04-2016 R615_RS01125 7c5b5632c98514b206cc0e35b34fdf0a 634 Gene3D G3DSA:3.30.2010.10 103 187 8.8E-27 T 22-04-2016 R615_RS01125 7c5b5632c98514b206cc0e35b34fdf0a 634 Pfam PF01435 Peptidase family M48 106 319 2.5E-30 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 R615_RS08615 4c4e2dcb9f1425cfd899fefcbf9f9230 403 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 1.8E-143 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 R615_RS08615 4c4e2dcb9f1425cfd899fefcbf9f9230 403 PANTHER PTHR30012 2 403 6.7E-184 T 22-04-2016 R615_RS08615 4c4e2dcb9f1425cfd899fefcbf9f9230 403 PANTHER PTHR30012:SF6 2 403 6.7E-184 T 22-04-2016 R615_RS08615 4c4e2dcb9f1425cfd899fefcbf9f9230 403 Pfam PF00482 Type II secretion system (T2SS), protein F 275 394 2.5E-27 T 22-04-2016 IPR018076 Type II secretion system F domain R615_RS08615 4c4e2dcb9f1425cfd899fefcbf9f9230 403 Pfam PF00482 Type II secretion system (T2SS), protein F 70 192 2.1E-27 T 22-04-2016 IPR018076 Type II secretion system F domain R615_RS08615 4c4e2dcb9f1425cfd899fefcbf9f9230 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 8.23E-29 T 22-04-2016 IPR003004 GspF/PilC family R615_RS08615 4c4e2dcb9f1425cfd899fefcbf9f9230 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 8.23E-29 T 22-04-2016 IPR003004 GspF/PilC family R615_RS08615 4c4e2dcb9f1425cfd899fefcbf9f9230 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 8.23E-29 T 22-04-2016 IPR003004 GspF/PilC family R615_RS08615 4c4e2dcb9f1425cfd899fefcbf9f9230 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 8.23E-29 T 22-04-2016 IPR003004 GspF/PilC family R615_RS04350 3402216a4924a49ba30ae43b7d5000af 141 SUPERFAMILY SSF161084 11 133 2.35E-16 T 22-04-2016 R615_RS04350 3402216a4924a49ba30ae43b7d5000af 141 Gene3D G3DSA:1.20.120.550 66 137 7.2E-5 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain R615_RS04350 3402216a4924a49ba30ae43b7d5000af 141 Pfam PF01124 MAPEG family 10 136 7.1E-21 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein R615_RS05910 afb357cde02e5dbaf3cef30d55d5135d 454 Pfam PF11902 Protein of unknown function (DUF3422) 27 437 2.3E-155 T 22-04-2016 IPR021830 Protein of unknown function DUF3422 R615_RS04420 10c923ee56aed1342973598db44365cd 287 SUPERFAMILY SSF53474 11 268 3.22E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS04420 10c923ee56aed1342973598db44365cd 287 Pfam PF12697 Alpha/beta hydrolase family 36 260 3.0E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS04420 10c923ee56aed1342973598db44365cd 287 PANTHER PTHR10992:SF796 14 270 5.3E-41 T 22-04-2016 R615_RS04420 10c923ee56aed1342973598db44365cd 287 Gene3D G3DSA:3.40.50.1820 5 270 7.7E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS04420 10c923ee56aed1342973598db44365cd 287 PANTHER PTHR10992 14 270 5.3E-41 T 22-04-2016 R615_RS08125 098de5f14e4bfd09133561e2369fc6f8 217 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 164 184 9.6E-6 T 22-04-2016 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 KEGG: 00900+3.4.22.- R615_RS08125 098de5f14e4bfd09133561e2369fc6f8 217 PRINTS PR01376 Yersinia/Haemophilus virulence surface antigen signature 35 51 9.6E-6 T 22-04-2016 IPR003951 Peptidase C58, Yersinia/Haemophilus virulence surface antigen GO:0004197 KEGG: 00900+3.4.22.- R615_RS08125 098de5f14e4bfd09133561e2369fc6f8 217 SUPERFAMILY SSF54001 40 181 5.1E-14 T 22-04-2016 R615_RS08125 098de5f14e4bfd09133561e2369fc6f8 217 Pfam PF03543 Yersinia/Haemophilus virulence surface antigen 18 207 5.7E-15 T 22-04-2016 IPR006473 Peptidase C58, YopT-type domain GO:0004197|GO:0009405 KEGG: 00900+3.4.22.- R615_RS10165 3fa5b48532b4efbac6543952481d5313 391 Pfam PF00487 Fatty acid desaturase 115 329 3.7E-24 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 R615_RS10165 3fa5b48532b4efbac6543952481d5313 391 PANTHER PTHR38674 14 383 9.1E-93 T 22-04-2016 R615_RS10165 3fa5b48532b4efbac6543952481d5313 391 PANTHER PTHR38674:SF1 14 383 9.1E-93 T 22-04-2016 R615_RS00720 c90d33baf477ced2162378829ea5a1c1 426 SUPERFAMILY SSF161098 202 410 4.06E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS00720 c90d33baf477ced2162378829ea5a1c1 426 Gene3D G3DSA:1.10.3720.10 34 58 2.1E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS00720 c90d33baf477ced2162378829ea5a1c1 426 Gene3D G3DSA:1.10.3720.10 183 425 2.1E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS00720 c90d33baf477ced2162378829ea5a1c1 426 Pfam PF11812 Domain of unknown function (DUF3333) 13 155 6.4E-43 T 22-04-2016 IPR024573 Domain of unknown function DUF3333 R615_RS00720 c90d33baf477ced2162378829ea5a1c1 426 PANTHER PTHR30425:SF2 2 56 3.4E-95 T 22-04-2016 R615_RS00720 c90d33baf477ced2162378829ea5a1c1 426 PANTHER PTHR30425:SF2 174 425 3.4E-95 T 22-04-2016 R615_RS00720 c90d33baf477ced2162378829ea5a1c1 426 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 183 423 6.5E-65 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 R615_RS00720 c90d33baf477ced2162378829ea5a1c1 426 PANTHER PTHR30425 2 56 3.4E-95 T 22-04-2016 R615_RS00720 c90d33baf477ced2162378829ea5a1c1 426 PANTHER PTHR30425 174 425 3.4E-95 T 22-04-2016 R615_RS00720 c90d33baf477ced2162378829ea5a1c1 426 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 224 425 4.9E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS02970 c50010c4f22b4d912bf8cde1fa6a3e37 151 PANTHER PTHR19384 1 147 2.2E-19 T 22-04-2016 R615_RS02970 c50010c4f22b4d912bf8cde1fa6a3e37 151 PANTHER PTHR19384:SF81 1 147 2.2E-19 T 22-04-2016 R615_RS02970 c50010c4f22b4d912bf8cde1fa6a3e37 151 Gene3D G3DSA:3.40.50.360 1 149 1.5E-29 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS02970 c50010c4f22b4d912bf8cde1fa6a3e37 151 SUPERFAMILY SSF52218 1 149 1.2E-33 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS02970 c50010c4f22b4d912bf8cde1fa6a3e37 151 Pfam PF00258 Flavodoxin 9 141 3.6E-19 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 R615_RS12290 f144dfcbdec2a6956151c3cc25610b61 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.622 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12290 f144dfcbdec2a6956151c3cc25610b61 100 Pfam PF00547 Urease, gamma subunit 1 99 7.4E-47 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12290 f144dfcbdec2a6956151c3cc25610b61 100 PIRSF PIRSF001223 1 100 5.1E-49 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12290 f144dfcbdec2a6956151c3cc25610b61 100 SUPERFAMILY SSF54111 1 99 1.44E-45 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12290 f144dfcbdec2a6956151c3cc25610b61 100 PANTHER PTHR33569:SF1 2 100 6.3E-46 T 22-04-2016 R615_RS12290 f144dfcbdec2a6956151c3cc25610b61 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 2.5E-49 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12290 f144dfcbdec2a6956151c3cc25610b61 100 Gene3D G3DSA:3.30.280.10 1 99 2.0E-49 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS12290 f144dfcbdec2a6956151c3cc25610b61 100 PANTHER PTHR33569 2 100 6.3E-46 T 22-04-2016 R615_RS12290 f144dfcbdec2a6956151c3cc25610b61 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-38 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 R615_RS08335 2dfae99249b17bde9578c20702f18256 202 PANTHER PTHR11079 2 200 1.8E-49 T 22-04-2016 R615_RS08335 2dfae99249b17bde9578c20702f18256 202 SUPERFAMILY SSF55120 2 201 4.64E-56 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS08335 2dfae99249b17bde9578c20702f18256 202 PANTHER PTHR11079:SF73 2 200 1.8E-49 T 22-04-2016 R615_RS08335 2dfae99249b17bde9578c20702f18256 202 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 45 59 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS08335 2dfae99249b17bde9578c20702f18256 202 Pfam PF00849 RNA pseudouridylate synthase 9 154 1.0E-25 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS07450 249e07f52e90aad35dea4f280c6ccd41 147 Pfam PF05117 Family of unknown function (DUF695) 5 136 1.7E-29 T 22-04-2016 IPR016097 Domain of unknown function DUF695 R615_RS12830 1e75a63396ac497a2696a5dcde708382 1224 Pfam PF13289 SIR2-like domain 117 250 3.3E-22 T 22-04-2016 R615_RS12830 1e75a63396ac497a2696a5dcde708382 1224 SUPERFAMILY SSF52467 91 217 7.52E-5 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain R615_RS10445 f48f045d74f05a417227561bb5f79803 139 PANTHER PTHR30204 1 118 7.2E-19 T 22-04-2016 R615_RS10445 f48f045d74f05a417227561bb5f79803 139 Gene3D G3DSA:1.10.1660.10 60 124 3.7E-18 T 22-04-2016 R615_RS10445 f48f045d74f05a417227561bb5f79803 139 SMART SM00422 5 73 2.3E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS10445 f48f045d74f05a417227561bb5f79803 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 1.6E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS10445 f48f045d74f05a417227561bb5f79803 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 1.6E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS10445 f48f045d74f05a417227561bb5f79803 139 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 1.6E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS10445 f48f045d74f05a417227561bb5f79803 139 Pfam PF13411 MerR HTH family regulatory protein 6 70 1.3E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS10445 f48f045d74f05a417227561bb5f79803 139 Gene3D G3DSA:1.10.1660.10 3 59 1.7E-19 T 22-04-2016 R615_RS10445 f48f045d74f05a417227561bb5f79803 139 SUPERFAMILY SSF46955 6 117 3.22E-25 T 22-04-2016 IPR009061 Putative DNA-binding domain R615_RS00755 6f6646a62dd0b61c78c5b0711720cb30 163 SUPERFAMILY SSF160246 10 65 1.28E-9 T 22-04-2016 R615_RS16305 bb03f6ef8dc4825f0cc6cee4faaf8f75 252 Pfam PF04338 Protein of unknown function, DUF481 46 252 1.1E-61 T 22-04-2016 IPR007433 Protein of unknown function DUF481 R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 SUPERFAMILY SSF50249 3 123 3.77E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 9.5E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 9.5E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 9.5E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 9.5E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 9.5E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 9.5E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 Gene3D G3DSA:2.40.50.140 1 123 1.1E-64 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 PIRSF PIRSF002133 1 124 4.7E-53 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 PANTHER PTHR11652 1 116 2.1E-73 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 Pfam PF00164 Ribosomal protein S12/S23 9 123 3.1E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 5.3E-70 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 R615_RS15900 c32a70a209963ab4757d8ab52619aef5 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.79 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 R615_RS11810 3f935ebf4e9eda41a86b811f5a7e5dd7 250 PANTHER PTHR30071 14 228 3.7E-68 T 22-04-2016 R615_RS11810 3f935ebf4e9eda41a86b811f5a7e5dd7 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 104 124 5.22E-54 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11810 3f935ebf4e9eda41a86b811f5a7e5dd7 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 208 232 5.22E-54 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11810 3f935ebf4e9eda41a86b811f5a7e5dd7 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 160 186 5.22E-54 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11810 3f935ebf4e9eda41a86b811f5a7e5dd7 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 49 66 5.22E-54 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11810 3f935ebf4e9eda41a86b811f5a7e5dd7 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 125 145 5.22E-54 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11810 3f935ebf4e9eda41a86b811f5a7e5dd7 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 66 86 5.22E-54 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11810 3f935ebf4e9eda41a86b811f5a7e5dd7 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 49 232 4.3E-76 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 R615_RS11810 3f935ebf4e9eda41a86b811f5a7e5dd7 250 Pfam PF01578 Cytochrome C assembly protein 26 188 9.3E-27 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 R615_RS00545 37283748d12a53ebd4a7b310ec0a2e40 238 PANTHER PTHR21392 10 230 7.1E-82 T 22-04-2016 R615_RS00545 37283748d12a53ebd4a7b310ec0a2e40 238 PANTHER PTHR21392:SF1 10 230 7.1E-82 T 22-04-2016 R615_RS00545 37283748d12a53ebd4a7b310ec0a2e40 238 Pfam PF03942 DTW domain 35 222 3.7E-40 T 22-04-2016 IPR005636 DTW R615_RS00545 37283748d12a53ebd4a7b310ec0a2e40 238 SMART SM01144 33 228 2.2E-58 T 22-04-2016 IPR005636 DTW R615_RS02905 fc5110b0fd0a51e1deb6adbfbfb91a7a 374 Pfam PF09084 NMT1/THI5 like 70 281 7.3E-7 T 22-04-2016 IPR015168 SsuA/THI5-like R615_RS02905 fc5110b0fd0a51e1deb6adbfbfb91a7a 374 SUPERFAMILY SSF53850 65 280 1.74E-14 T 22-04-2016 R615_RS02905 fc5110b0fd0a51e1deb6adbfbfb91a7a 374 Gene3D G3DSA:3.40.190.10 146 215 1.5E-6 T 22-04-2016 R615_RS05030 6d315b578009e204a683dcadb33c35f1 101 SUPERFAMILY SSF52091 9 100 3.14E-21 T 22-04-2016 IPR002645 STAS domain R615_RS05030 6d315b578009e204a683dcadb33c35f1 101 Pfam PF13466 STAS domain 16 94 1.3E-10 T 22-04-2016 IPR002645 STAS domain R615_RS05030 6d315b578009e204a683dcadb33c35f1 101 Gene3D G3DSA:3.30.750.24 11 100 7.1E-21 T 22-04-2016 IPR002645 STAS domain R615_RS10190 0e3ba0509a959d3594953c1644477b8c 135 SUPERFAMILY SSF46458 14 126 3.5E-28 T 22-04-2016 IPR009050 Globin-like R615_RS10190 0e3ba0509a959d3594953c1644477b8c 135 Gene3D G3DSA:1.10.490.10 11 128 9.7E-31 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 R615_RS10190 0e3ba0509a959d3594953c1644477b8c 135 Pfam PF01152 Bacterial-like globin 15 111 4.7E-25 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 R615_RS10185 8992198d1b986acacf5c4476fc628ba1 244 PANTHER PTHR21600 1 243 2.1E-55 T 22-04-2016 R615_RS10185 8992198d1b986acacf5c4476fc628ba1 244 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 108 122 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 R615_RS10185 8992198d1b986acacf5c4476fc628ba1 244 SUPERFAMILY SSF55174 5 100 1.35E-8 T 22-04-2016 R615_RS10185 8992198d1b986acacf5c4476fc628ba1 244 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 231 3.2E-39 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 R615_RS10185 8992198d1b986acacf5c4476fc628ba1 244 Pfam PF00849 RNA pseudouridylate synthase 66 199 2.3E-16 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS10185 8992198d1b986acacf5c4476fc628ba1 244 Gene3D G3DSA:3.10.290.10 6 68 6.1E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 R615_RS10185 8992198d1b986acacf5c4476fc628ba1 244 SUPERFAMILY SSF55120 65 235 3.04E-43 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 R615_RS10185 8992198d1b986acacf5c4476fc628ba1 244 PANTHER PTHR21600:SF19 1 243 2.1E-55 T 22-04-2016 R615_RS11855 6f6b844c9b242262a5c1d4ef50c22e7a 144 SUPERFAMILY SSF52833 12 135 8.05E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11855 6f6b844c9b242262a5c1d4ef50c22e7a 144 Pfam PF08534 Redoxin 12 129 9.8E-7 T 22-04-2016 IPR013740 Redoxin GO:0016491 R615_RS11855 6f6b844c9b242262a5c1d4ef50c22e7a 144 Gene3D G3DSA:3.40.30.10 11 133 2.6E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS11300 16e4847af6baa2e50f5828c63fb7fba0 383 Pfam PF00487 Fatty acid desaturase 128 342 6.8E-27 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 R615_RS11300 16e4847af6baa2e50f5828c63fb7fba0 383 PANTHER PTHR38674:SF1 3 383 2.2E-120 T 22-04-2016 R615_RS11300 16e4847af6baa2e50f5828c63fb7fba0 383 PANTHER PTHR38674 3 383 2.2E-120 T 22-04-2016 R615_RS08320 1bc764a0b255e4767cd62a1829cb59a1 261 PANTHER PTHR10992 66 258 1.9E-17 T 22-04-2016 R615_RS08320 1bc764a0b255e4767cd62a1829cb59a1 261 Gene3D G3DSA:3.40.50.1820 6 258 1.3E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS08320 1bc764a0b255e4767cd62a1829cb59a1 261 Pfam PF12697 Alpha/beta hydrolase family 9 250 2.8E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS08320 1bc764a0b255e4767cd62a1829cb59a1 261 SUPERFAMILY SSF53474 6 256 5.91E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS12270 1d139911bd6727358b6a6eac7549126a 268 PANTHER PTHR38034 4 264 5.7E-46 T 22-04-2016 R615_RS12270 1d139911bd6727358b6a6eac7549126a 268 Pfam PF01578 Cytochrome C assembly protein 40 262 9.0E-23 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 R615_RS14310 87deb02e2148215fb6934f7ce5d27b9d 166 Pfam PF04463 Protein of unknown function (DUF523) 5 152 3.9E-44 T 22-04-2016 IPR007553 Domain of unknown function DUF523 R615_RS14310 87deb02e2148215fb6934f7ce5d27b9d 166 PANTHER PTHR30087:SF1 1 154 1.3E-55 T 22-04-2016 R615_RS14310 87deb02e2148215fb6934f7ce5d27b9d 166 PANTHER PTHR30087 1 154 1.3E-55 T 22-04-2016 R615_RS12880 0313d465705824efbe2672c6197820cd 133 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 99 2.1E-12 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 R615_RS12880 0313d465705824efbe2672c6197820cd 133 SUPERFAMILY SSF69754 1 94 5.76E-17 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 R615_RS12880 0313d465705824efbe2672c6197820cd 133 Gene3D G3DSA:3.30.160.100 1 102 8.1E-15 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 R615_RS07290 ad10c655fd8e800eb971b313cf20423d 434 SUPERFAMILY SSF50974 125 421 6.54E-38 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal R615_RS07290 ad10c655fd8e800eb971b313cf20423d 434 Gene3D G3DSA:2.130.10.10 58 90 5.3E-29 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 R615_RS07290 ad10c655fd8e800eb971b313cf20423d 434 Gene3D G3DSA:2.130.10.10 123 421 5.3E-29 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 R615_RS13980 89720c8ce4a805a1fde4627af9fd3a0d 563 SMART SM00098 74 553 2.7E-160 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 R615_RS13980 89720c8ce4a805a1fde4627af9fd3a0d 563 PANTHER PTHR11596:SF45 43 550 2.5E-222 T 22-04-2016 R615_RS13980 89720c8ce4a805a1fde4627af9fd3a0d 563 SUPERFAMILY SSF53649 55 553 3.09E-150 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 R615_RS13980 89720c8ce4a805a1fde4627af9fd3a0d 563 PANTHER PTHR11596 43 550 2.5E-222 T 22-04-2016 R615_RS13980 89720c8ce4a805a1fde4627af9fd3a0d 563 PRINTS PR00113 Alkaline phosphatase signature 350 379 4.2E-33 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 R615_RS13980 89720c8ce4a805a1fde4627af9fd3a0d 563 PRINTS PR00113 Alkaline phosphatase signature 73 93 4.2E-33 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 R615_RS13980 89720c8ce4a805a1fde4627af9fd3a0d 563 PRINTS PR00113 Alkaline phosphatase signature 176 196 4.2E-33 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 R615_RS13980 89720c8ce4a805a1fde4627af9fd3a0d 563 PRINTS PR00113 Alkaline phosphatase signature 129 144 4.2E-33 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 R615_RS13980 89720c8ce4a805a1fde4627af9fd3a0d 563 Pfam PF00245 Alkaline phosphatase 73 552 1.1E-122 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 R615_RS13980 89720c8ce4a805a1fde4627af9fd3a0d 563 Gene3D G3DSA:3.40.720.10 45 555 4.1E-162 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 R615_RS02160 38cf46e8cad61c0109a983e4c56aa8f1 253 Gene3D G3DSA:3.40.1390.30 5 109 8.8E-37 T 22-04-2016 R615_RS02160 38cf46e8cad61c0109a983e4c56aa8f1 253 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 240 9.4E-54 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 R615_RS02160 38cf46e8cad61c0109a983e4c56aa8f1 253 SUPERFAMILY SSF102705 4 252 1.83E-76 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 R615_RS02160 38cf46e8cad61c0109a983e4c56aa8f1 253 Gene3D G3DSA:3.40.1390.30 110 220 7.7E-28 T 22-04-2016 R615_RS02160 38cf46e8cad61c0109a983e4c56aa8f1 253 PANTHER PTHR13799 4 249 2.2E-66 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 R615_RS02160 38cf46e8cad61c0109a983e4c56aa8f1 253 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 252 6.5E-63 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 R615_RS04345 d2eed9235c1c8445a2bb29366e10e078 185 SUPERFAMILY SSF51206 15 136 8.51E-20 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like R615_RS04345 d2eed9235c1c8445a2bb29366e10e078 185 SMART SM00100 3 125 3.1E-4 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS04345 d2eed9235c1c8445a2bb29366e10e078 185 PANTHER PTHR24567 11 178 2.7E-15 T 22-04-2016 R615_RS04345 d2eed9235c1c8445a2bb29366e10e078 185 Pfam PF00027 Cyclic nucleotide-binding domain 23 103 2.5E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain R615_RS04345 d2eed9235c1c8445a2bb29366e10e078 185 Gene3D G3DSA:2.60.120.10 16 145 1.0E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold R615_RS17040 2c6bc58799e47b5bed61fa7703d81fd8 458 Gene3D G3DSA:3.30.565.10 310 455 4.9E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17040 2c6bc58799e47b5bed61fa7703d81fd8 458 SMART SM00387 338 456 1.7E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17040 2c6bc58799e47b5bed61fa7703d81fd8 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 1.3E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17040 2c6bc58799e47b5bed61fa7703d81fd8 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 1.3E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17040 2c6bc58799e47b5bed61fa7703d81fd8 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.3E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS17040 2c6bc58799e47b5bed61fa7703d81fd8 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 455 4.8E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17040 2c6bc58799e47b5bed61fa7703d81fd8 458 SUPERFAMILY SSF55874 307 455 2.49E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS17040 2c6bc58799e47b5bed61fa7703d81fd8 458 PANTHER PTHR24423 219 453 6.6E-42 T 22-04-2016 R615_RS17040 2c6bc58799e47b5bed61fa7703d81fd8 458 PANTHER PTHR24423:SF543 219 453 6.6E-42 T 22-04-2016 R615_RS01790 5ef19727ef50e6cc2b6bf7cd40f9bd97 242 SMART SM01321 9 124 7.9E-37 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS01790 5ef19727ef50e6cc2b6bf7cd40f9bd97 242 PANTHER PTHR34322:SF1 2 148 1.7E-29 T 22-04-2016 R615_RS01790 5ef19727ef50e6cc2b6bf7cd40f9bd97 242 Pfam PF01797 Transposase IS200 like 12 122 1.1E-11 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS01790 5ef19727ef50e6cc2b6bf7cd40f9bd97 242 PANTHER PTHR34322 2 148 1.7E-29 T 22-04-2016 R615_RS01790 5ef19727ef50e6cc2b6bf7cd40f9bd97 242 SUPERFAMILY SSF143422 3 125 1.7E-26 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS01790 5ef19727ef50e6cc2b6bf7cd40f9bd97 242 Gene3D G3DSA:3.30.70.1290 11 125 2.7E-9 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 SUPERFAMILY SSF53901 2 214 6.61E-45 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 Gene3D G3DSA:3.40.47.10 3 204 7.2E-45 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 150 229 1.6E-13 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 Gene3D G3DSA:3.40.47.10 205 370 2.1E-24 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 147 163 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 SUPERFAMILY SSF53901 249 370 2.84E-24 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 281 370 6.3E-20 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 PANTHER PTHR34069:SF1 92 370 1.7E-131 T 22-04-2016 R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 PANTHER PTHR34069:SF1 1 25 1.7E-131 T 22-04-2016 R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 PANTHER PTHR34069:SF1 50 70 1.7E-131 T 22-04-2016 R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 PANTHER PTHR34069 92 370 1.7E-131 T 22-04-2016 R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 PANTHER PTHR34069 1 25 1.7E-131 T 22-04-2016 R615_RS03890 13f6e674de22f8713c8c35bc766aad5e 372 PANTHER PTHR34069 50 70 1.7E-131 T 22-04-2016 R615_RS17550 f2b0fe80242161383807269ef6d3a9a8 184 SUPERFAMILY SSF54637 26 138 4.98E-26 T 22-04-2016 IPR029069 HotDog domain R615_RS17550 f2b0fe80242161383807269ef6d3a9a8 184 PANTHER PTHR12475 1 171 3.4E-25 T 22-04-2016 R615_RS17550 f2b0fe80242161383807269ef6d3a9a8 184 Pfam PF13279 Thioesterase-like superfamily 32 133 1.3E-16 T 22-04-2016 R615_RS17550 f2b0fe80242161383807269ef6d3a9a8 184 Gene3D G3DSA:3.10.129.10 25 133 5.9E-17 T 22-04-2016 IPR029069 HotDog domain R615_RS17155 70227c3daaf0df5c0cdf7c2f8b204578 133 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 116 17.811 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 R615_RS17155 70227c3daaf0df5c0cdf7c2f8b204578 133 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 11 114 1.0E-24 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 R615_RS17155 70227c3daaf0df5c0cdf7c2f8b204578 133 Gene3D G3DSA:3.30.230.10 4 115 9.7E-31 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup R615_RS17155 70227c3daaf0df5c0cdf7c2f8b204578 133 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 18 99 1.0E-19 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 R615_RS17155 70227c3daaf0df5c0cdf7c2f8b204578 133 PANTHER PTHR33992 2 113 2.8E-31 T 22-04-2016 R615_RS17155 70227c3daaf0df5c0cdf7c2f8b204578 133 Pfam PF00825 Ribonuclease P 6 113 4.8E-29 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 R615_RS17155 70227c3daaf0df5c0cdf7c2f8b204578 133 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 R615_RS17155 70227c3daaf0df5c0cdf7c2f8b204578 133 SUPERFAMILY SSF54211 5 116 1.06E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold R615_RS15730 c0856f5ca0010626c4b74eea4dbd2700 330 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 26 305 3.1E-42 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 R615_RS15730 c0856f5ca0010626c4b74eea4dbd2700 330 PANTHER PTHR33376 7 328 4.7E-40 T 22-04-2016 R615_RS01370 c35ba0471d0c839f5613499816087e02 303 SUPERFAMILY SSF161098 15 294 3.46E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS01370 c35ba0471d0c839f5613499816087e02 303 Gene3D G3DSA:1.10.3720.10 13 291 1.0E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS01370 c35ba0471d0c839f5613499816087e02 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 20 297 9.2E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS01370 c35ba0471d0c839f5613499816087e02 303 PANTHER PTHR30193 1 302 2.6E-120 T 22-04-2016 R615_RS01370 c35ba0471d0c839f5613499816087e02 303 PANTHER PTHR30193:SF5 1 302 2.6E-120 T 22-04-2016 R615_RS14970 7b717e65e48325275e19d251914a93fe 464 PANTHER PTHR11748 3 462 1.0E-219 T 22-04-2016 R615_RS14970 7b717e65e48325275e19d251914a93fe 464 Gene3D G3DSA:3.30.465.10 96 217 2.9E-37 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 R615_RS14970 7b717e65e48325275e19d251914a93fe 464 SUPERFAMILY SSF55103 193 462 7.03E-57 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 R615_RS14970 7b717e65e48325275e19d251914a93fe 464 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 461 2.0E-58 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 R615_RS14970 7b717e65e48325275e19d251914a93fe 464 Gene3D G3DSA:3.30.43.10 3 95 7.2E-30 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 R615_RS14970 7b717e65e48325275e19d251914a93fe 464 Gene3D G3DSA:1.10.45.10 422 461 4.5E-12 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 R615_RS14970 7b717e65e48325275e19d251914a93fe 464 Pfam PF01565 FAD binding domain 41 179 1.1E-36 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 R615_RS14970 7b717e65e48325275e19d251914a93fe 464 PANTHER PTHR11748:SF76 3 462 1.0E-219 T 22-04-2016 R615_RS14970 7b717e65e48325275e19d251914a93fe 464 SUPERFAMILY SSF56176 4 217 1.68E-68 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 R615_RS06265 504e361643f9a615fa98269e7dbefab0 231 SUPERFAMILY SSF52540 40 210 3.38E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06265 504e361643f9a615fa98269e7dbefab0 231 PANTHER PTHR30050 1 226 6.6E-92 T 22-04-2016 R615_RS06265 504e361643f9a615fa98269e7dbefab0 231 Pfam PF00308 Bacterial dnaA protein 92 204 4.7E-11 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA R615_RS06265 504e361643f9a615fa98269e7dbefab0 231 Gene3D G3DSA:3.40.50.300 3 160 3.3E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06265 504e361643f9a615fa98269e7dbefab0 231 PANTHER PTHR30050:SF5 1 226 6.6E-92 T 22-04-2016 R615_RS06265 504e361643f9a615fa98269e7dbefab0 231 Gene3D G3DSA:1.10.8.60 165 230 3.0E-26 T 22-04-2016 R615_RS06265 504e361643f9a615fa98269e7dbefab0 231 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 227 3.6E-84 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 R615_RS01505 1c8332a703db73fcaf19f5ba9d52b985 147 Pfam PF00583 Acetyltransferase (GNAT) family 46 119 6.4E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS01505 1c8332a703db73fcaf19f5ba9d52b985 147 Gene3D G3DSA:3.40.630.30 1 145 4.9E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS01505 1c8332a703db73fcaf19f5ba9d52b985 147 PANTHER PTHR23091 1 147 4.4E-26 T 22-04-2016 R615_RS01505 1c8332a703db73fcaf19f5ba9d52b985 147 SUPERFAMILY SSF55729 1 144 1.28E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS01505 1c8332a703db73fcaf19f5ba9d52b985 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 140 5.9E-33 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 R615_RS05490 57e0867678d19d0b5b6fa07b524c770d 257 PANTHER PTHR35005 1 250 2.6E-41 T 22-04-2016 R615_RS05490 57e0867678d19d0b5b6fa07b524c770d 257 Gene3D G3DSA:3.40.50.10310 3 239 2.5E-69 T 22-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 R615_RS05490 57e0867678d19d0b5b6fa07b524c770d 257 Pfam PF02633 Creatinine amidohydrolase 6 234 3.6E-60 T 22-04-2016 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 R615_RS05490 57e0867678d19d0b5b6fa07b524c770d 257 SUPERFAMILY SSF102215 3 237 8.63E-64 T 22-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 R615_RS05490 57e0867678d19d0b5b6fa07b524c770d 257 PANTHER PTHR35005:SF1 1 250 2.6E-41 T 22-04-2016 R615_RS03730 588d9eaa2480533ae0d9ae5a9e99ef52 372 Pfam PF00487 Fatty acid desaturase 71 346 2.1E-15 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 R615_RS16260 743cd47ad7ed97ba0602a324a8665dca 171 SUPERFAMILY SSF55729 2 119 4.36E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS16260 743cd47ad7ed97ba0602a324a8665dca 171 Pfam PF00583 Acetyltransferase (GNAT) family 45 119 1.2E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS16260 743cd47ad7ed97ba0602a324a8665dca 171 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 1 155 6.7E-59 T 22-04-2016 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00250+2.3.1.17|KEGG: 00260+2.3.1.178|UniPathway: UPA00067 R615_RS16260 743cd47ad7ed97ba0602a324a8665dca 171 Gene3D G3DSA:3.40.630.30 1 155 3.5E-66 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 6 365 39.752 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 PRINTS PR01010 Flagellar P-ring protein signature 38 53 5.3E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 PRINTS PR01010 Flagellar P-ring protein signature 55 70 5.3E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 PRINTS PR01010 Flagellar P-ring protein signature 187 205 5.3E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 PRINTS PR01010 Flagellar P-ring protein signature 161 179 5.3E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 PRINTS PR01010 Flagellar P-ring protein signature 23 38 5.3E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 PRINTS PR01010 Flagellar P-ring protein signature 81 100 5.3E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 PRINTS PR01010 Flagellar P-ring protein signature 103 120 5.3E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 PRINTS PR01010 Flagellar P-ring protein signature 251 263 5.3E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 PRINTS PR01010 Flagellar P-ring protein signature 120 138 5.3E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 Pfam PF02119 Flagellar P-ring protein 23 364 3.3E-139 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 PANTHER PTHR30381:SF1 1 365 8.9E-206 T 22-04-2016 R615_RS04660 fdf1bcf90b8eef0e187fe75736536b5c 365 PANTHER PTHR30381 1 365 8.9E-206 T 22-04-2016 R615_RS14575 7d33c6e706fb947de196ba3c806116f3 320 SUPERFAMILY SSF53822 9 305 1.37E-22 T 22-04-2016 IPR028082 Periplasmic binding protein-like I R615_RS14575 7d33c6e706fb947de196ba3c806116f3 320 Gene3D G3DSA:3.40.50.2300 11 139 7.0E-15 T 22-04-2016 R615_RS14575 7d33c6e706fb947de196ba3c806116f3 320 Gene3D G3DSA:3.40.50.2300 223 296 2.8E-5 T 22-04-2016 R615_RS14575 7d33c6e706fb947de196ba3c806116f3 320 Pfam PF13407 Periplasmic binding protein domain 12 288 1.4E-27 T 22-04-2016 IPR025997 Periplasmic binding protein R615_RS07670 44e80a8136ef8f9166a64df31cd20fa3 359 Gene3D G3DSA:3.40.630.30 4 144 5.8E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS07670 44e80a8136ef8f9166a64df31cd20fa3 359 SUPERFAMILY SSF55729 3 150 1.42E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS07670 44e80a8136ef8f9166a64df31cd20fa3 359 Pfam PF11814 Peptidase_C39 like family 155 358 6.5E-79 T 22-04-2016 IPR021770 Protein of unknown function DUF3335 R615_RS07670 44e80a8136ef8f9166a64df31cd20fa3 359 PANTHER PTHR23091:SF256 1 177 2.1E-31 T 22-04-2016 R615_RS07670 44e80a8136ef8f9166a64df31cd20fa3 359 Pfam PF00583 Acetyltransferase (GNAT) family 63 122 1.5E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS07670 44e80a8136ef8f9166a64df31cd20fa3 359 PANTHER PTHR23091 1 177 2.1E-31 T 22-04-2016 R615_RS13970 0e6023bd317995548b3aaf669657b7d4 196 PANTHER PTHR11911 69 196 1.3E-20 T 22-04-2016 R615_RS13970 0e6023bd317995548b3aaf669657b7d4 196 SUPERFAMILY SSF54631 66 187 2.15E-25 T 22-04-2016 R615_RS13970 0e6023bd317995548b3aaf669657b7d4 196 SMART SM00116 74 122 0.15 T 22-04-2016 IPR000644 CBS domain R615_RS13970 0e6023bd317995548b3aaf669657b7d4 196 SMART SM00116 139 187 4.4E-12 T 22-04-2016 IPR000644 CBS domain R615_RS13970 0e6023bd317995548b3aaf669657b7d4 196 Pfam PF00571 CBS domain 68 121 7.8E-8 T 22-04-2016 IPR000644 CBS domain R615_RS13970 0e6023bd317995548b3aaf669657b7d4 196 Pfam PF00571 CBS domain 138 187 1.0E-9 T 22-04-2016 IPR000644 CBS domain R615_RS13970 0e6023bd317995548b3aaf669657b7d4 196 Gene3D G3DSA:3.20.20.70 55 188 7.7E-25 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 R615_RS03660 c26067fd45bf568fb90e6d9dd3738a08 505 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 491 45.477 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 R615_RS03660 c26067fd45bf568fb90e6d9dd3738a08 505 PANTHER PTHR32057 7 505 1.9E-178 T 22-04-2016 R615_RS03660 c26067fd45bf568fb90e6d9dd3738a08 505 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 474 2.4E-131 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 R615_RS06795 0ffe4c216c19bb8c8bc893a9068e3eff 146 Pfam PF03061 Thioesterase superfamily 16 98 1.1E-16 T 22-04-2016 IPR006683 Thioesterase domain R615_RS06795 0ffe4c216c19bb8c8bc893a9068e3eff 146 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 5 103 1.4E-30 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 R615_RS06795 0ffe4c216c19bb8c8bc893a9068e3eff 146 Gene3D G3DSA:3.10.129.10 1 136 1.3E-47 T 22-04-2016 IPR029069 HotDog domain R615_RS06795 0ffe4c216c19bb8c8bc893a9068e3eff 146 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 2 134 2.7E-44 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- R615_RS06795 0ffe4c216c19bb8c8bc893a9068e3eff 146 SUPERFAMILY SSF54637 1 134 3.16E-37 T 22-04-2016 IPR029069 HotDog domain R615_RS06795 0ffe4c216c19bb8c8bc893a9068e3eff 146 PANTHER PTHR31793:SF9 1 136 1.0E-39 T 22-04-2016 R615_RS06795 0ffe4c216c19bb8c8bc893a9068e3eff 146 PANTHER PTHR31793 1 136 1.0E-39 T 22-04-2016 R615_RS06795 0ffe4c216c19bb8c8bc893a9068e3eff 146 PIRSF PIRSF003230 1 143 4.4E-47 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 R615_RS09340 48e1d1eedb4f1875280d15e5401762ba 160 SUPERFAMILY SSF52833 10 141 3.87E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS09340 48e1d1eedb4f1875280d15e5401762ba 160 Gene3D G3DSA:3.40.30.10 9 150 1.3E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS16160 9e04886887c7337abc90b00c41c8bce5 162 SUPERFAMILY SSF55040 11 155 1.57E-60 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 R615_RS16160 9e04886887c7337abc90b00c41c8bce5 162 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.7E-65 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 R615_RS16160 9e04886887c7337abc90b00c41c8bce5 162 Gene3D G3DSA:3.30.70.640 3 157 2.1E-67 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 R615_RS16160 9e04886887c7337abc90b00c41c8bce5 162 Pfam PF01967 MoaC family 15 150 1.2E-52 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 R615_RS16160 9e04886887c7337abc90b00c41c8bce5 162 PANTHER PTHR22960 1 158 1.6E-94 T 22-04-2016 R615_RS16160 9e04886887c7337abc90b00c41c8bce5 162 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 34.791 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 R615_RS10780 0e0dac0351962f63421a9183653b3695 165 Gene3D G3DSA:3.40.30.10 6 163 3.8E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS10780 0e0dac0351962f63421a9183653b3695 165 SUPERFAMILY SSF52833 21 162 2.27E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS10780 0e0dac0351962f63421a9183653b3695 165 PANTHER PTHR10681 17 162 1.1E-30 T 22-04-2016 R615_RS10780 0e0dac0351962f63421a9183653b3695 165 PANTHER PTHR10681:SF104 17 162 1.1E-30 T 22-04-2016 R615_RS10780 0e0dac0351962f63421a9183653b3695 165 Pfam PF00578 AhpC/TSA family 23 139 4.0E-23 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 R615_RS09865 2a751a0cff9babeedc6c894b421c6ae3 532 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 60 219 1.7E-22 T 22-04-2016 R615_RS09865 2a751a0cff9babeedc6c894b421c6ae3 532 PANTHER PTHR33908:SF3 2 460 1.7E-64 T 22-04-2016 R615_RS09865 2a751a0cff9babeedc6c894b421c6ae3 532 PANTHER PTHR33908 2 460 1.7E-64 T 22-04-2016 R615_RS08315 653df9af4a3fb8f8418a7d3dcef15c9e 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 118 2.4E-23 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- R615_RS08315 653df9af4a3fb8f8418a7d3dcef15c9e 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 75 1.2E-11 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 R615_RS08315 653df9af4a3fb8f8418a7d3dcef15c9e 154 SMART SM00855 2 110 1.2E-4 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 R615_RS08315 653df9af4a3fb8f8418a7d3dcef15c9e 154 Gene3D G3DSA:3.40.50.1240 1 150 4.4E-29 T 22-04-2016 IPR029033 Histidine phosphatase superfamily R615_RS08315 653df9af4a3fb8f8418a7d3dcef15c9e 154 PANTHER PTHR20935 1 78 8.6E-14 T 22-04-2016 R615_RS08315 653df9af4a3fb8f8418a7d3dcef15c9e 154 SUPERFAMILY SSF53254 1 133 4.45E-19 T 22-04-2016 IPR029033 Histidine phosphatase superfamily R615_RS10000 7ba106a7282d6c5b20a9e2f4e180a23f 283 Gene3D G3DSA:3.40.50.300 2 221 1.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10000 7ba106a7282d6c5b20a9e2f4e180a23f 283 PANTHER PTHR24220 6 259 2.7E-118 T 22-04-2016 R615_RS10000 7ba106a7282d6c5b20a9e2f4e180a23f 283 SMART SM00382 33 216 3.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS10000 7ba106a7282d6c5b20a9e2f4e180a23f 283 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 R615_RS10000 7ba106a7282d6c5b20a9e2f4e180a23f 283 Pfam PF00005 ABC transporter 24 166 5.7E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 R615_RS10000 7ba106a7282d6c5b20a9e2f4e180a23f 283 SUPERFAMILY SSF52540 5 235 1.49E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10000 7ba106a7282d6c5b20a9e2f4e180a23f 283 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 2.2E-107 T 22-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 R615_RS10000 7ba106a7282d6c5b20a9e2f4e180a23f 283 PANTHER PTHR24220:SF361 6 259 2.7E-118 T 22-04-2016 R615_RS08475 92b7422967a9b11ca8827b141cd0723a 215 PANTHER PTHR35869 1 215 1.6E-43 T 22-04-2016 R615_RS08475 92b7422967a9b11ca8827b141cd0723a 215 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 11 211 26.996 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 R615_RS08475 92b7422967a9b11ca8827b141cd0723a 215 SUPERFAMILY SSF89392 30 211 2.86E-49 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX R615_RS08475 92b7422967a9b11ca8827b141cd0723a 215 Gene3D G3DSA:2.50.20.10 30 212 1.7E-56 T 22-04-2016 R615_RS08475 92b7422967a9b11ca8827b141cd0723a 215 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 17 212 1.1E-25 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 R615_RS08475 92b7422967a9b11ca8827b141cd0723a 215 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 201 2.9E-46 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like R615_RS07375 8707c7e9acfb828179440016c9674d4e 345 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 30 212 2.0E-29 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS07375 8707c7e9acfb828179440016c9674d4e 345 PANTHER PTHR11019 81 96 2.1E-23 T 22-04-2016 R615_RS07375 8707c7e9acfb828179440016c9674d4e 345 PANTHER PTHR11019 227 345 2.1E-23 T 22-04-2016 R615_RS07375 8707c7e9acfb828179440016c9674d4e 345 SMART SM00342 256 338 4.3E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS07375 8707c7e9acfb828179440016c9674d4e 345 Gene3D G3DSA:1.10.10.60 291 342 4.5E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS07375 8707c7e9acfb828179440016c9674d4e 345 PANTHER PTHR11019:SF52 81 96 2.1E-23 T 22-04-2016 R615_RS07375 8707c7e9acfb828179440016c9674d4e 345 PANTHER PTHR11019:SF52 227 345 2.1E-23 T 22-04-2016 R615_RS07375 8707c7e9acfb828179440016c9674d4e 345 SUPERFAMILY SSF46689 292 341 7.17E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS07375 8707c7e9acfb828179440016c9674d4e 345 Pfam PF12833 Helix-turn-helix domain 263 340 9.6E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS07375 8707c7e9acfb828179440016c9674d4e 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 322 1.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS07375 8707c7e9acfb828179440016c9674d4e 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 322 338 1.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS00935 9238f3a7806419e25b403264f8dea964 78 PANTHER PTHR13528 1 70 6.7E-37 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 R615_RS00935 9238f3a7806419e25b403264f8dea964 78 Pfam PF00830 Ribosomal L28 family 3 62 1.2E-28 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 R615_RS00935 9238f3a7806419e25b403264f8dea964 78 Gene3D G3DSA:2.30.170.40 2 78 9.3E-38 T 22-04-2016 R615_RS00935 9238f3a7806419e25b403264f8dea964 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 7.0E-29 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS00935 9238f3a7806419e25b403264f8dea964 78 SUPERFAMILY SSF143800 2 77 4.71E-32 T 22-04-2016 R615_RS00935 9238f3a7806419e25b403264f8dea964 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 21.479 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS06800 4fc5fd8eb8820f64038327447c1716bb 232 TIGRFAM TIGR02796 tolQ: protein TolQ 2 213 1.9E-88 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 R615_RS06800 4fc5fd8eb8820f64038327447c1716bb 232 PANTHER PTHR30625 1 232 7.2E-70 T 22-04-2016 R615_RS06800 4fc5fd8eb8820f64038327447c1716bb 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 73 202 4.5E-43 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 R615_RS06800 4fc5fd8eb8820f64038327447c1716bb 232 PANTHER PTHR30625:SF3 1 232 7.2E-70 T 22-04-2016 R615_RS01285 2e764c996345f0e913f36ef3e2b07b88 403 Pfam PF04932 O-Antigen ligase 186 330 2.0E-18 T 22-04-2016 IPR007016 O-antigen ligase-related R615_RS01285 2e764c996345f0e913f36ef3e2b07b88 403 PANTHER PTHR37422 179 381 6.5E-15 T 22-04-2016 R615_RS01285 2e764c996345f0e913f36ef3e2b07b88 403 PANTHER PTHR37422:SF2 179 381 6.5E-15 T 22-04-2016 R615_RS01060 27efb026cd192ff6ba089e2210db3d1f 209 SUPERFAMILY SSF55718 28 123 3.14E-5 T 22-04-2016 IPR003033 SCP2 sterol-binding domain R615_RS01060 27efb026cd192ff6ba089e2210db3d1f 209 PANTHER PTHR38693:SF1 1 209 3.3E-30 T 22-04-2016 R615_RS01060 27efb026cd192ff6ba089e2210db3d1f 209 PANTHER PTHR38693 1 209 3.3E-30 T 22-04-2016 R615_RS01060 27efb026cd192ff6ba089e2210db3d1f 209 Pfam PF02036 SCP-2 sterol transfer family 18 115 2.4E-7 T 22-04-2016 IPR003033 SCP2 sterol-binding domain R615_RS14810 f6023f5884684b7cf5986733a591d1c5 225 PANTHER PTHR36434 1 225 5.2E-37 T 22-04-2016 R615_RS14810 f6023f5884684b7cf5986733a591d1c5 225 Pfam PF04298 Putative neutral zinc metallopeptidase 4 223 3.1E-59 T 22-04-2016 IPR007395 Putative neutral zinc metallopeptidase R615_RS14845 ac16c91746eda3ed1657510173c03f5e 252 PANTHER PTHR30433:SF2 2 252 5.2E-110 T 22-04-2016 IPR022522 Flagellar motor stator, MotA R615_RS14845 ac16c91746eda3ed1657510173c03f5e 252 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 208 6.2E-22 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 R615_RS14845 ac16c91746eda3ed1657510173c03f5e 252 PANTHER PTHR30433 2 252 5.2E-110 T 22-04-2016 R615_RS14845 ac16c91746eda3ed1657510173c03f5e 252 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site R615_RS09860 7739afb4bb920c3ec82270c7b1a2e458 316 Gene3D G3DSA:3.90.550.10 1 176 6.4E-28 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS09860 7739afb4bb920c3ec82270c7b1a2e458 316 PANTHER PTHR10859 1 316 8.2E-104 T 22-04-2016 R615_RS09860 7739afb4bb920c3ec82270c7b1a2e458 316 PANTHER PTHR10859:SF49 1 316 8.2E-104 T 22-04-2016 R615_RS09860 7739afb4bb920c3ec82270c7b1a2e458 316 SUPERFAMILY SSF53448 1 259 1.53E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS09860 7739afb4bb920c3ec82270c7b1a2e458 316 Pfam PF00535 Glycosyl transferase family 2 5 149 3.1E-29 T 22-04-2016 IPR001173 Glycosyltransferase 2-like R615_RS00445 e0fbdaff9a3ad6c00e8b6b6c35651394 295 Hamap MF_00188 Protease HtpX [htpX]. 1 292 25.309 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 R615_RS00445 e0fbdaff9a3ad6c00e8b6b6c35651394 295 Gene3D G3DSA:3.30.2010.10 78 164 7.9E-31 T 22-04-2016 R615_RS00445 e0fbdaff9a3ad6c00e8b6b6c35651394 295 PANTHER PTHR10120 1 291 1.3E-89 T 22-04-2016 R615_RS00445 e0fbdaff9a3ad6c00e8b6b6c35651394 295 PANTHER PTHR10120:SF19 1 291 1.3E-89 T 22-04-2016 R615_RS00445 e0fbdaff9a3ad6c00e8b6b6c35651394 295 Pfam PF01435 Peptidase family M48 83 292 7.2E-43 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 R615_RS09960 86706bed6013f74aa6ba3f728fce6c0a 553 PANTHER PTHR34219 1 543 3.6E-93 T 22-04-2016 R615_RS09960 86706bed6013f74aa6ba3f728fce6c0a 553 PANTHER PTHR34219:SF4 1 543 3.6E-93 T 22-04-2016 R615_RS09960 86706bed6013f74aa6ba3f728fce6c0a 553 Pfam PF03929 PepSY-associated TM region 2 394 2.1E-54 T 22-04-2016 IPR005625 PepSY-associated TM protein R615_RS17260 51da772edf3d35a4f710f7e42e200fca 186 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 5 153 4.9E-17 T 22-04-2016 IPR013362 Pilus modification type IV, PilV R615_RS17260 51da772edf3d35a4f710f7e42e200fca 186 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 27 1.4E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS04455 ed1669f0796f7800d594c663a4b23253 704 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 261 698 3.3E-20 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit R615_RS17490 719203c802f4485020544a8b5cfa8546 93 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 27 80 1.8E-7 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS08465 d9b94ec85c96143dbae2544fafcab32b 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 40 219 4.9E-48 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 R615_RS08465 d9b94ec85c96143dbae2544fafcab32b 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 73.791 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 R615_RS08465 d9b94ec85c96143dbae2544fafcab32b 236 PANTHER PTHR30098 1 218 2.3E-57 T 22-04-2016 R615_RS08465 d9b94ec85c96143dbae2544fafcab32b 236 SUPERFAMILY SSF55729 8 228 1.05E-68 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS08465 d9b94ec85c96143dbae2544fafcab32b 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 38 209 1.8E-60 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 R615_RS15560 87c9af57a5e6fd0853ca9660fba1995a 292 Gene3D G3DSA:1.10.443.10 4 119 8.8E-4 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 R615_RS06410 da2fef5387a0526c56c5b2feed11d309 485 SUPERFAMILY SSF161098 281 465 6.21E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS06410 da2fef5387a0526c56c5b2feed11d309 485 PANTHER PTHR30043:SF1 279 482 8.5E-24 T 22-04-2016 R615_RS06410 da2fef5387a0526c56c5b2feed11d309 485 Gene3D G3DSA:1.10.3720.10 46 221 1.8E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS06410 da2fef5387a0526c56c5b2feed11d309 485 Gene3D G3DSA:1.10.3720.10 277 474 3.7E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS06410 da2fef5387a0526c56c5b2feed11d309 485 PANTHER PTHR30043 279 482 8.5E-24 T 22-04-2016 R615_RS06410 da2fef5387a0526c56c5b2feed11d309 485 SUPERFAMILY SSF161098 46 224 1.44E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 Pfam PF00175 Oxidoreductase NAD-binding domain 218 321 1.0E-18 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 SUPERFAMILY SSF52343 198 338 6.55E-36 T 22-04-2016 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 Gene3D G3DSA:2.40.30.10 113 207 1.4E-18 T 22-04-2016 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 Pfam PF00970 Oxidoreductase FAD-binding domain 114 208 2.0E-12 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 PANTHER PTHR19370:SF32 42 340 1.8E-52 T 22-04-2016 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 PANTHER PTHR19370 42 340 1.8E-52 T 22-04-2016 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 308 316 4.29E-25 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 217 236 4.29E-25 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 202 211 4.29E-25 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 242 251 4.29E-25 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 138 150 4.29E-25 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 Gene3D G3DSA:3.40.50.80 208 340 3.6E-35 T 22-04-2016 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 Gene3D G3DSA:3.10.20.30 8 97 3.2E-24 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 SUPERFAMILY SSF63380 113 208 6.63E-19 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 90 2.1E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 45 53 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 SUPERFAMILY SSF54292 12 98 2.49E-23 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 308 316 3.73E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 156 163 3.73E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 3.73E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 R615_RS04225 8878b6bbcdf0eef47f1c4c137bd0dc00 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 217 236 3.73E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 R615_RS06500 17deb34ba86fc11528e0c27136c87ecf 492 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 328 462 1.2E-11 T 22-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain R615_RS06500 17deb34ba86fc11528e0c27136c87ecf 492 Pfam PF01943 Polysaccharide biosynthesis protein 10 272 4.4E-26 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 R615_RS04230 4e0804dafc36a6fbf9760cb911764fe1 386 Pfam PF00487 Fatty acid desaturase 117 322 4.8E-29 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 R615_RS04230 4e0804dafc36a6fbf9760cb911764fe1 386 PANTHER PTHR38674:SF1 7 383 6.4E-57 T 22-04-2016 R615_RS04230 4e0804dafc36a6fbf9760cb911764fe1 386 PANTHER PTHR38674 7 383 6.4E-57 T 22-04-2016 R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.543 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 SUPERFAMILY SSF52402 3 210 9.86E-77 T 22-04-2016 R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 7.2E-65 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 PIRSF PIRSF002936 1 302 1.2E-158 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 PANTHER PTHR23293:SF6 245 302 7.0E-98 T 22-04-2016 R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 PANTHER PTHR23293:SF6 178 211 7.0E-98 T 22-04-2016 R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 PANTHER PTHR23293:SF6 1 158 7.0E-98 T 22-04-2016 R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 6.6E-162 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 Gene3D G3DSA:3.40.50.620 244 253 2.6E-64 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 Gene3D G3DSA:3.40.50.620 2 210 2.6E-64 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 PANTHER PTHR23293 245 302 7.0E-98 T 22-04-2016 R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 PANTHER PTHR23293 178 211 7.0E-98 T 22-04-2016 R615_RS10820 ec0a824ccc28015a713a50231be1d728 302 PANTHER PTHR23293 1 158 7.0E-98 T 22-04-2016 R615_RS15335 f09fdbff4a2bb73dfee7bec0212af87c 207 SUPERFAMILY SSF55729 14 160 2.17E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS15335 f09fdbff4a2bb73dfee7bec0212af87c 207 Gene3D G3DSA:3.40.630.30 9 168 4.8E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS04325 1b9c058d383137b44063cfea0413e292 104 PIRSF PIRSF039032 1 104 2.3E-41 T 22-04-2016 IPR009387 Toxin HigB-2 R615_RS04325 1b9c058d383137b44063cfea0413e292 104 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 43 101 4.6E-9 T 22-04-2016 IPR009387 Toxin HigB-2 R615_RS04700 7ecb54badb1e10a532d49ee7df9b2288 324 SUPERFAMILY SSF64182 6 315 6.91E-41 T 22-04-2016 R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 SMART SM00490 459 545 1.8E-20 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 Pfam PF00271 Helicase conserved C-terminal domain 434 544 2.6E-21 T 22-04-2016 IPR001650 Helicase, C-terminal R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 673 43.509 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 Gene3D G3DSA:3.30.2060.10 161 232 9.8E-11 T 22-04-2016 R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 Pfam PF04851 Type III restriction enzyme, res subunit 17 97 5.3E-8 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 Gene3D G3DSA:3.40.50.300 278 338 3.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 Gene3D G3DSA:3.40.50.300 388 409 3.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 Gene3D G3DSA:3.40.50.300 5 89 3.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 SMART SM00487 9 437 6.8E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 Pfam PF02151 UvrB/uvrC motif 640 673 1.8E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 Gene3D G3DSA:4.10.860.10 621 675 2.3E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 SUPERFAMILY SSF46600 627 674 3.79E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 PANTHER PTHR24029 1 676 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 Gene3D G3DSA:3.40.50.300 417 581 9.9E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 SUPERFAMILY SSF52540 458 583 7.29E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 SUPERFAMILY SSF52540 37 82 7.29E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 Pfam PF12344 Ultra-violet resistance protein B 551 592 1.3E-22 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 SUPERFAMILY SSF52540 3 414 6.6E-137 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06275 0271af9cb78e520135227eadc845d1b3 678 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 670 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 R615_RS11505 72ad436ba86ed291591537d0d904efba 460 Pfam PF07044 Protein of unknown function (DUF1329) 84 455 1.8E-149 T 22-04-2016 IPR010752 Protein of unknown function DUF1329 R615_RS11505 72ad436ba86ed291591537d0d904efba 460 Gene3D G3DSA:2.50.20.10 165 313 4.5E-38 T 22-04-2016 R615_RS11505 72ad436ba86ed291591537d0d904efba 460 Gene3D G3DSA:2.50.20.10 346 456 4.5E-38 T 22-04-2016 R615_RS15595 4357cc9c57906364f6c3aeaf6f0dcac4 412 SUPERFAMILY SSF111369 185 332 3.27E-8 T 22-04-2016 R615_RS15595 4357cc9c57906364f6c3aeaf6f0dcac4 412 Gene3D G3DSA:2.40.50.100 187 254 1.7E-12 T 22-04-2016 R615_RS15595 4357cc9c57906364f6c3aeaf6f0dcac4 412 Pfam PF13437 HlyD family secretion protein 227 316 6.9E-10 T 22-04-2016 R615_RS15595 4357cc9c57906364f6c3aeaf6f0dcac4 412 PANTHER PTHR30097 10 412 1.4E-45 T 22-04-2016 R615_RS15595 4357cc9c57906364f6c3aeaf6f0dcac4 412 Pfam PF13533 Biotin-lipoyl like 187 221 1.1E-6 T 22-04-2016 R615_RS15595 4357cc9c57906364f6c3aeaf6f0dcac4 412 PANTHER PTHR30097:SF4 10 412 1.4E-45 T 22-04-2016 R615_RS02500 2380717334b00727a692075e939d0455 283 Gene3D G3DSA:3.40.50.1820 2 280 3.3E-79 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS02500 2380717334b00727a692075e939d0455 283 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 278 1.5E-122 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 R615_RS02500 2380717334b00727a692075e939d0455 283 PANTHER PTHR10061 2 283 1.4E-164 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 R615_RS02500 2380717334b00727a692075e939d0455 283 Pfam PF00756 Putative esterase 28 275 1.0E-62 T 22-04-2016 IPR000801 Putative esterase R615_RS02500 2380717334b00727a692075e939d0455 283 SUPERFAMILY SSF53474 3 281 2.32E-91 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS11400 0f9e274ccb3ac57a2ba6581410e48556 177 Pfam PF11157 Protein of unknown function (DUF2937) 3 161 8.2E-49 T 22-04-2016 IPR022584 Protein of unknown function DUF2937 R615_RS11560 8701c8448a863ef7d75e0589dc81760a 95 SUPERFAMILY SSF47781 25 90 1.78E-26 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 R615_RS11560 8701c8448a863ef7d75e0589dc81760a 95 Gene3D G3DSA:1.10.150.280 32 93 2.5E-20 T 22-04-2016 R615_RS11560 8701c8448a863ef7d75e0589dc81760a 95 PANTHER PTHR21180 18 94 3.6E-23 T 22-04-2016 R615_RS11560 8701c8448a863ef7d75e0589dc81760a 95 SMART SM00278 42 61 0.011 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 R615_RS11560 8701c8448a863ef7d75e0589dc81760a 95 SMART SM00278 72 91 17.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 R615_RS11560 8701c8448a863ef7d75e0589dc81760a 95 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 32 92 1.4E-23 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain R615_RS11560 8701c8448a863ef7d75e0589dc81760a 95 Pfam PF12836 Helix-hairpin-helix motif 31 91 1.0E-23 T 22-04-2016 R615_RS15680 cf926c0e5660fa994c64f2edd948fcb6 144 Gene3D G3DSA:3.30.300.20 1 143 9.3E-43 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta R615_RS15680 cf926c0e5660fa994c64f2edd948fcb6 144 Pfam PF02566 OsmC-like protein 42 143 1.3E-19 T 22-04-2016 IPR003718 OsmC/Ohr family R615_RS15680 cf926c0e5660fa994c64f2edd948fcb6 144 SUPERFAMILY SSF82784 4 143 9.81E-38 T 22-04-2016 IPR003718 OsmC/Ohr family R615_RS08340 759c2913db3396650bf8d326b1f9b956 445 PANTHER PTHR30217 241 422 1.3E-201 T 22-04-2016 R615_RS08340 759c2913db3396650bf8d326b1f9b956 445 PANTHER PTHR30217 1 205 1.3E-201 T 22-04-2016 R615_RS08340 759c2913db3396650bf8d326b1f9b956 445 PANTHER PTHR30217:SF6 241 422 1.3E-201 T 22-04-2016 R615_RS08340 759c2913db3396650bf8d326b1f9b956 445 PANTHER PTHR30217:SF6 1 205 1.3E-201 T 22-04-2016 R615_RS08340 759c2913db3396650bf8d326b1f9b956 445 Pfam PF16325 Peptidase family U32 C-terminal domain 355 422 8.5E-14 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- R615_RS08340 759c2913db3396650bf8d326b1f9b956 445 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- R615_RS08340 759c2913db3396650bf8d326b1f9b956 445 Pfam PF01136 Peptidase family U32 76 337 6.5E-98 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- R615_RS12110 33d1ca555fe0f34724a8ab63f694cbf6 267 PANTHER PTHR10060 5 258 2.6E-57 T 22-04-2016 IPR001130 TatD family GO:0016788 R615_RS12110 33d1ca555fe0f34724a8ab63f694cbf6 267 PIRSF PIRSF005902 1 257 3.0E-54 T 22-04-2016 IPR001130 TatD family GO:0016788 R615_RS12110 33d1ca555fe0f34724a8ab63f694cbf6 267 Pfam PF01026 TatD related DNase 5 253 1.3E-55 T 22-04-2016 IPR001130 TatD family GO:0016788 R615_RS12110 33d1ca555fe0f34724a8ab63f694cbf6 267 Gene3D G3DSA:3.20.20.140 3 254 9.0E-64 T 22-04-2016 R615_RS12110 33d1ca555fe0f34724a8ab63f694cbf6 267 SUPERFAMILY SSF51556 4 254 4.82E-64 T 22-04-2016 IPR032466 Metal-dependent hydrolase R615_RS04715 651daa4c8d0ff3aa47303e5b985f3593 319 Pfam PF04932 O-Antigen ligase 143 290 9.7E-8 T 22-04-2016 IPR007016 O-antigen ligase-related R615_RS00820 0353164ccd9a1b64dad2ed537a5400cc 423 Pfam PF00375 Sodium:dicarboxylate symporter family 3 406 1.9E-125 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 R615_RS00820 0353164ccd9a1b64dad2ed537a5400cc 423 SUPERFAMILY SSF118215 3 408 1.15E-114 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 R615_RS00820 0353164ccd9a1b64dad2ed537a5400cc 423 Gene3D G3DSA:1.10.3860.10 2 412 3.9E-129 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 R615_RS00820 0353164ccd9a1b64dad2ed537a5400cc 423 PANTHER PTHR11958 3 414 4.2E-154 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 R615_RS00820 0353164ccd9a1b64dad2ed537a5400cc 423 PRINTS PR00173 Glutamate-aspartate symporter signature 150 172 1.3E-47 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 R615_RS00820 0353164ccd9a1b64dad2ed537a5400cc 423 PRINTS PR00173 Glutamate-aspartate symporter signature 361 381 1.3E-47 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 R615_RS00820 0353164ccd9a1b64dad2ed537a5400cc 423 PRINTS PR00173 Glutamate-aspartate symporter signature 197 216 1.3E-47 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 R615_RS00820 0353164ccd9a1b64dad2ed537a5400cc 423 PRINTS PR00173 Glutamate-aspartate symporter signature 232 251 1.3E-47 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 R615_RS00820 0353164ccd9a1b64dad2ed537a5400cc 423 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.3E-47 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 R615_RS00820 0353164ccd9a1b64dad2ed537a5400cc 423 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 1.3E-47 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 R615_RS00820 0353164ccd9a1b64dad2ed537a5400cc 423 PRINTS PR00173 Glutamate-aspartate symporter signature 334 353 1.3E-47 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 R615_RS00555 00823a1bfc74a6694a3c55756bb3d5a9 240 PANTHER PTHR12532 1 240 3.8E-115 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like R615_RS00555 00823a1bfc74a6694a3c55756bb3d5a9 240 Gene3D G3DSA:3.30.1270.10 211 237 2.9E-28 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 R615_RS00555 00823a1bfc74a6694a3c55756bb3d5a9 240 Gene3D G3DSA:3.30.1270.10 82 131 2.9E-28 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 R615_RS00555 00823a1bfc74a6694a3c55756bb3d5a9 240 Gene3D G3DSA:3.30.70.980 132 203 5.1E-17 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 R615_RS00555 00823a1bfc74a6694a3c55756bb3d5a9 240 Pfam PF01709 Transcriptional regulator 4 235 1.9E-67 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like R615_RS00555 00823a1bfc74a6694a3c55756bb3d5a9 240 SUPERFAMILY SSF75625 1 238 4.97E-70 T 22-04-2016 IPR029072 YebC-like R615_RS00555 00823a1bfc74a6694a3c55756bb3d5a9 240 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 25.626 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like R615_RS00555 00823a1bfc74a6694a3c55756bb3d5a9 240 Gene3D G3DSA:1.10.10.200 1 78 2.0E-24 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like R615_RS00555 00823a1bfc74a6694a3c55756bb3d5a9 240 PANTHER PTHR12532:SF4 1 240 3.8E-115 T 22-04-2016 R615_RS05035 4bd848c8f0f0f1ba908b81d4e8a66ad4 571 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 190 381 9.9E-36 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS05035 4bd848c8f0f0f1ba908b81d4e8a66ad4 571 SUPERFAMILY SSF52172 1 142 7.97E-35 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS05035 4bd848c8f0f0f1ba908b81d4e8a66ad4 571 Gene3D G3DSA:3.40.50.2300 3 141 6.4E-34 T 22-04-2016 R615_RS05035 4bd848c8f0f0f1ba908b81d4e8a66ad4 571 PANTHER PTHR26402 4 122 1.5E-34 T 22-04-2016 R615_RS05035 4bd848c8f0f0f1ba908b81d4e8a66ad4 571 SMART SM00331 179 381 1.4E-4 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS05035 4bd848c8f0f0f1ba908b81d4e8a66ad4 571 SUPERFAMILY SSF81606 247 377 5.49E-5 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 R615_RS05035 4bd848c8f0f0f1ba908b81d4e8a66ad4 571 Pfam PF00072 Response regulator receiver domain 6 117 1.2E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS05035 4bd848c8f0f0f1ba908b81d4e8a66ad4 571 Pfam PF13581 Histidine kinase-like ATPase domain 445 559 1.3E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS05035 4bd848c8f0f0f1ba908b81d4e8a66ad4 571 SMART SM00448 4 117 1.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS01535 a2da629cfa04cb2870c0b066c3abaa87 178 Pfam PF05036 Sporulation related domain 102 172 1.2E-17 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 R615_RS01535 a2da629cfa04cb2870c0b066c3abaa87 178 Gene3D G3DSA:3.30.70.1070 96 173 9.0E-24 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 R615_RS01535 a2da629cfa04cb2870c0b066c3abaa87 178 SUPERFAMILY SSF110997 101 173 1.01E-18 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 R615_RS14640 eca33eca701cd816f33bae095be5de53 381 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 105 323 1.9E-34 T 22-04-2016 IPR018713 Domain of unknown function DUF2236 R615_RS14640 eca33eca701cd816f33bae095be5de53 381 PANTHER PTHR37539 42 280 3.1E-34 T 22-04-2016 R615_RS12630 5e9997cb8c278ff9f630b31dc705357f 480 PANTHER PTHR41339 44 472 4.1E-36 T 22-04-2016 R615_RS01225 4db7f1034cb4db503f17660acbcc92cd 123 PANTHER PTHR26402 2 118 3.6E-41 T 22-04-2016 R615_RS01225 4db7f1034cb4db503f17660acbcc92cd 123 SUPERFAMILY SSF52172 1 118 6.12E-38 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS01225 4db7f1034cb4db503f17660acbcc92cd 123 Gene3D G3DSA:3.40.50.2300 1 118 3.9E-39 T 22-04-2016 R615_RS01225 4db7f1034cb4db503f17660acbcc92cd 123 Pfam PF00072 Response regulator receiver domain 4 115 4.0E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS01225 4db7f1034cb4db503f17660acbcc92cd 123 SMART SM00448 2 115 1.1E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 R615_RS12760 161f26261fd50037fbe7a77f9dd4384c 309 PANTHER PTHR34308 3 309 7.0E-83 T 22-04-2016 R615_RS12760 161f26261fd50037fbe7a77f9dd4384c 309 Pfam PF03186 CobD/Cbib protein 3 282 2.8E-88 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 R615_RS12760 161f26261fd50037fbe7a77f9dd4384c 309 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 309 90.202 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 R615_RS12760 161f26261fd50037fbe7a77f9dd4384c 309 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 4 268 6.3E-57 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 R615_RS12760 161f26261fd50037fbe7a77f9dd4384c 309 PANTHER PTHR34308:SF1 3 309 7.0E-83 T 22-04-2016 R615_RS11625 25c3a90366542e19e4e204b3f9f6e978 334 PIRSF PIRSF005211 1 323 1.3E-82 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- R615_RS11625 25c3a90366542e19e4e204b3f9f6e978 334 PANTHER PTHR10794 1 318 3.7E-54 T 22-04-2016 R615_RS11625 25c3a90366542e19e4e204b3f9f6e978 334 Pfam PF12697 Alpha/beta hydrolase family 61 305 7.0E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS11625 25c3a90366542e19e4e204b3f9f6e978 334 Gene3D G3DSA:3.40.50.1820 54 306 6.5E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS11625 25c3a90366542e19e4e204b3f9f6e978 334 SUPERFAMILY SSF53474 37 305 1.3E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS16905 754ef611a3f07c6ebdd95eeaea0b25ff 487 PANTHER PTHR34595:SF3 7 481 7.3E-268 T 22-04-2016 R615_RS16905 754ef611a3f07c6ebdd95eeaea0b25ff 487 SUPERFAMILY SSF56059 28 219 6.33E-64 T 22-04-2016 R615_RS16905 754ef611a3f07c6ebdd95eeaea0b25ff 487 SUPERFAMILY SSF56059 327 473 6.33E-64 T 22-04-2016 R615_RS16905 754ef611a3f07c6ebdd95eeaea0b25ff 487 PIRSF PIRSF005522 1 485 3.3E-220 T 22-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 R615_RS16905 754ef611a3f07c6ebdd95eeaea0b25ff 487 PANTHER PTHR34595 7 481 7.3E-268 T 22-04-2016 R615_RS16905 754ef611a3f07c6ebdd95eeaea0b25ff 487 Pfam PF14403 Circularly permuted ATP-grasp type 2 81 458 1.9E-162 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 R615_RS13185 c409eb938fca6058f4ebe90d7a4eac90 335 PANTHER PTHR34322:SF2 2 301 2.3E-135 T 22-04-2016 R615_RS13185 c409eb938fca6058f4ebe90d7a4eac90 335 Gene3D G3DSA:3.30.70.1290 134 189 2.6E-9 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS13185 c409eb938fca6058f4ebe90d7a4eac90 335 Gene3D G3DSA:3.30.70.1290 45 81 2.6E-9 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS13185 c409eb938fca6058f4ebe90d7a4eac90 335 SUPERFAMILY SSF143422 16 80 1.15E-20 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS13185 c409eb938fca6058f4ebe90d7a4eac90 335 SUPERFAMILY SSF143422 133 191 1.15E-20 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS13185 c409eb938fca6058f4ebe90d7a4eac90 335 PANTHER PTHR34322 2 301 2.3E-135 T 22-04-2016 R615_RS13185 c409eb938fca6058f4ebe90d7a4eac90 335 SMART SM01321 12 186 7.5E-6 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 R615_RS14135 c698b54c71526fe1d1e714b384abea46 271 Gene3D G3DSA:3.60.21.10 169 267 8.8E-57 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS14135 c698b54c71526fe1d1e714b384abea46 271 Gene3D G3DSA:3.60.21.10 1 132 8.8E-57 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS14135 c698b54c71526fe1d1e714b384abea46 271 Pfam PF00149 Calcineurin-like phosphoesterase 4 140 2.7E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 R615_RS14135 c698b54c71526fe1d1e714b384abea46 271 PANTHER PTHR24032 1 265 7.3E-132 T 22-04-2016 R615_RS14135 c698b54c71526fe1d1e714b384abea46 271 SUPERFAMILY SSF56300 1 259 7.08E-61 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like R615_RS14135 c698b54c71526fe1d1e714b384abea46 271 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 268 3.3E-104 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 R615_RS14135 c698b54c71526fe1d1e714b384abea46 271 PIRSF PIRSF000903 1 271 2.7E-117 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 R615_RS14135 c698b54c71526fe1d1e714b384abea46 271 PANTHER PTHR24032:SF27 1 265 7.3E-132 T 22-04-2016 R615_RS14135 c698b54c71526fe1d1e714b384abea46 271 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 47.299 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 R615_RS07930 0a9c25385b434f7e47acf4bf73fd951e 186 SUPERFAMILY SSF56784 12 166 1.16E-37 T 22-04-2016 IPR023214 HAD-like domain R615_RS07930 0a9c25385b434f7e47acf4bf73fd951e 186 PANTHER PTHR21485:SF3 8 172 8.0E-43 T 22-04-2016 R615_RS07930 0a9c25385b434f7e47acf4bf73fd951e 186 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 15 164 2.6E-49 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 R615_RS07930 0a9c25385b434f7e47acf4bf73fd951e 186 Gene3D G3DSA:3.40.50.1000 8 163 2.1E-40 T 22-04-2016 IPR023214 HAD-like domain R615_RS07930 0a9c25385b434f7e47acf4bf73fd951e 186 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 16 128 1.9E-12 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA R615_RS07930 0a9c25385b434f7e47acf4bf73fd951e 186 Pfam PF08282 haloacid dehalogenase-like hydrolase 83 157 4.6E-6 T 22-04-2016 IPR023214 HAD-like domain R615_RS07930 0a9c25385b434f7e47acf4bf73fd951e 186 PANTHER PTHR21485 8 172 8.0E-43 T 22-04-2016 R615_RS07930 0a9c25385b434f7e47acf4bf73fd951e 186 PIRSF PIRSF006118 2 177 3.5E-61 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 R615_RS10675 8ab0d6172dc8281289fb6fc5bd863394 452 SUPERFAMILY SSF103647 216 307 9.81E-15 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS10675 8ab0d6172dc8281289fb6fc5bd863394 452 Gene3D G3DSA:4.10.1080.10 218 343 9.6E-19 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS10675 8ab0d6172dc8281289fb6fc5bd863394 452 Pfam PF02412 Thrombospondin type 3 repeat 241 279 2.6E-7 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS10675 8ab0d6172dc8281289fb6fc5bd863394 452 Pfam PF02412 Thrombospondin type 3 repeat 281 303 0.0057 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS10675 8ab0d6172dc8281289fb6fc5bd863394 452 Pfam PF02412 Thrombospondin type 3 repeat 219 240 0.002 T 22-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 R615_RS10675 8ab0d6172dc8281289fb6fc5bd863394 452 PANTHER PTHR10199 219 339 8.7E-16 T 22-04-2016 R615_RS10675 8ab0d6172dc8281289fb6fc5bd863394 452 PANTHER PTHR10199:SF92 219 339 8.7E-16 T 22-04-2016 R615_RS04205 871b6cf55fa0286782b3d115e6e0ea48 291 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 16 270 1.4E-93 T 22-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 R615_RS04205 871b6cf55fa0286782b3d115e6e0ea48 291 PIRSF PIRSF018982 1 281 6.1E-87 T 22-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 R615_RS04205 871b6cf55fa0286782b3d115e6e0ea48 291 PANTHER PTHR39330 16 287 1.2E-86 T 22-04-2016 R615_RS16175 a874baf50bdf1c67110bf7b4fcd51b65 369 Gene3D G3DSA:3.40.50.300 100 342 1.8E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16175 a874baf50bdf1c67110bf7b4fcd51b65 369 SUPERFAMILY SSF52540 2 335 1.88E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS16175 a874baf50bdf1c67110bf7b4fcd51b65 369 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 1 342 2.2E-133 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 R615_RS16175 a874baf50bdf1c67110bf7b4fcd51b65 369 SMART SM00382 120 245 0.0024 T 22-04-2016 IPR003593 AAA+ ATPase domain R615_RS16175 a874baf50bdf1c67110bf7b4fcd51b65 369 PANTHER PTHR30486:SF3 1 369 1.7E-165 T 22-04-2016 R615_RS16175 a874baf50bdf1c67110bf7b4fcd51b65 369 Pfam PF00437 Type II/IV secretion system protein 116 249 2.2E-34 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 R615_RS16175 a874baf50bdf1c67110bf7b4fcd51b65 369 PANTHER PTHR30486 1 369 1.7E-165 T 22-04-2016 R615_RS15580 69e40c146b6daf1dfd1f86b459933b6e 127 PIRSF PIRSF019455 1 127 1.6E-22 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 R615_RS15580 69e40c146b6daf1dfd1f86b459933b6e 127 SUPERFAMILY SSF46785 3 119 6.82E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS15580 69e40c146b6daf1dfd1f86b459933b6e 127 PANTHER PTHR34134:SF1 3 127 3.1E-24 T 22-04-2016 R615_RS15580 69e40c146b6daf1dfd1f86b459933b6e 127 Gene3D G3DSA:1.10.10.10 3 76 1.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS15580 69e40c146b6daf1dfd1f86b459933b6e 127 PANTHER PTHR34134 3 127 3.1E-24 T 22-04-2016 R615_RS15580 69e40c146b6daf1dfd1f86b459933b6e 127 Pfam PF03965 Penicillinase repressor 3 117 2.3E-25 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 R615_RS04965 78f2b62815923a3e3fdaa17230f40920 572 Pfam PF08345 Flagellar M-ring protein C-terminal 281 450 5.9E-46 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal R615_RS04965 78f2b62815923a3e3fdaa17230f40920 572 PANTHER PTHR30046 27 572 4.0E-165 T 22-04-2016 R615_RS04965 78f2b62815923a3e3fdaa17230f40920 572 PANTHER PTHR30046:SF0 27 572 4.0E-165 T 22-04-2016 R615_RS04965 78f2b62815923a3e3fdaa17230f40920 572 PRINTS PR01009 Flagellar M-ring protein signature 294 312 6.0E-37 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 R615_RS04965 78f2b62815923a3e3fdaa17230f40920 572 PRINTS PR01009 Flagellar M-ring protein signature 148 166 6.0E-37 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 R615_RS04965 78f2b62815923a3e3fdaa17230f40920 572 PRINTS PR01009 Flagellar M-ring protein signature 374 398 6.0E-37 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 R615_RS04965 78f2b62815923a3e3fdaa17230f40920 572 PRINTS PR01009 Flagellar M-ring protein signature 180 194 6.0E-37 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 R615_RS04965 78f2b62815923a3e3fdaa17230f40920 572 PRINTS PR01009 Flagellar M-ring protein signature 223 241 6.0E-37 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 R615_RS04965 78f2b62815923a3e3fdaa17230f40920 572 PIRSF PIRSF004862 34 572 4.3E-138 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 R615_RS04965 78f2b62815923a3e3fdaa17230f40920 572 Pfam PF01514 Secretory protein of YscJ/FliF family 57 247 2.0E-66 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF R615_RS04965 78f2b62815923a3e3fdaa17230f40920 572 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 42 570 3.3E-92 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 R615_RS16210 97eb40ffa99d8f80d86ac8be1fc20bac 200 SUPERFAMILY SSF53335 7 186 7.34E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS16210 97eb40ffa99d8f80d86ac8be1fc20bac 200 Pfam PF07021 Methionine biosynthesis protein MetW 5 197 3.4E-83 T 22-04-2016 IPR010743 Methionine biosynthesis MetW R615_RS16210 97eb40ffa99d8f80d86ac8be1fc20bac 200 PANTHER PTHR10108:SF831 1 166 1.6E-58 T 22-04-2016 R615_RS16210 97eb40ffa99d8f80d86ac8be1fc20bac 200 Gene3D G3DSA:3.40.50.150 10 186 4.6E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS16210 97eb40ffa99d8f80d86ac8be1fc20bac 200 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 5 197 1.4E-83 T 22-04-2016 IPR010743 Methionine biosynthesis MetW R615_RS16210 97eb40ffa99d8f80d86ac8be1fc20bac 200 PANTHER PTHR10108 1 166 1.6E-58 T 22-04-2016 R615_RS08725 52f111184af51cd236929bb1f667d0c2 143 Gene3D G3DSA:1.10.1660.10 1 55 7.3E-19 T 22-04-2016 R615_RS08725 52f111184af51cd236929bb1f667d0c2 143 Pfam PF09278 MerR, DNA binding 45 107 6.2E-15 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding R615_RS08725 52f111184af51cd236929bb1f667d0c2 143 PANTHER PTHR30204 1 106 1.3E-16 T 22-04-2016 R615_RS08725 52f111184af51cd236929bb1f667d0c2 143 SUPERFAMILY SSF46955 1 115 4.4E-25 T 22-04-2016 IPR009061 Putative DNA-binding domain R615_RS08725 52f111184af51cd236929bb1f667d0c2 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.5E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08725 52f111184af51cd236929bb1f667d0c2 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.5E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08725 52f111184af51cd236929bb1f667d0c2 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.5E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08725 52f111184af51cd236929bb1f667d0c2 143 PANTHER PTHR30204:SF18 1 106 1.3E-16 T 22-04-2016 R615_RS08725 52f111184af51cd236929bb1f667d0c2 143 SMART SM00422 1 70 1.1E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 R615_RS08725 52f111184af51cd236929bb1f667d0c2 143 Gene3D G3DSA:1.10.1660.10 56 129 1.5E-18 T 22-04-2016 R615_RS16850 6fb7836347acf2427af66e48d7fe3f73 259 PANTHER PTHR38042 2 259 5.6E-43 T 22-04-2016 R615_RS16850 6fb7836347acf2427af66e48d7fe3f73 259 PANTHER PTHR38042:SF1 2 259 5.6E-43 T 22-04-2016 R615_RS16850 6fb7836347acf2427af66e48d7fe3f73 259 SUPERFAMILY SSF69618 8 254 9.42E-46 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16850 6fb7836347acf2427af66e48d7fe3f73 259 Pfam PF02602 Uroporphyrinogen-III synthase HemD 19 247 4.1E-31 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 R615_RS16850 6fb7836347acf2427af66e48d7fe3f73 259 Gene3D G3DSA:3.40.50.10090 11 127 1.9E-19 T 22-04-2016 R615_RS16850 6fb7836347acf2427af66e48d7fe3f73 259 Gene3D G3DSA:3.40.50.10090 136 253 3.8E-4 T 22-04-2016 R615_RS13530 dbfb3d215117ccd155f8dc64311ee2cc 561 SMART SM00244 26 195 2.5E-7 T 22-04-2016 IPR001107 Band 7 domain R615_RS13530 dbfb3d215117ccd155f8dc64311ee2cc 561 Pfam PF01145 SPFH domain / Band 7 family 40 207 1.4E-16 T 22-04-2016 IPR001107 Band 7 domain R615_RS13530 dbfb3d215117ccd155f8dc64311ee2cc 561 PANTHER PTHR13806:SF2 381 552 1.0E-161 T 22-04-2016 R615_RS13530 dbfb3d215117ccd155f8dc64311ee2cc 561 PANTHER PTHR13806:SF2 1 350 1.0E-161 T 22-04-2016 R615_RS13530 dbfb3d215117ccd155f8dc64311ee2cc 561 PANTHER PTHR13806 381 552 1.0E-161 T 22-04-2016 IPR027705 Flotillin family R615_RS13530 dbfb3d215117ccd155f8dc64311ee2cc 561 PANTHER PTHR13806 1 350 1.0E-161 T 22-04-2016 IPR027705 Flotillin family R615_RS13530 dbfb3d215117ccd155f8dc64311ee2cc 561 SUPERFAMILY SSF117892 57 189 7.59E-23 T 22-04-2016 IPR001107 Band 7 domain R615_RS13530 dbfb3d215117ccd155f8dc64311ee2cc 561 Pfam PF15975 Flotillin 424 551 2.0E-38 T 22-04-2016 IPR031905 Flotillin, C-terminal domain R615_RS05190 37faff104bd6abc7abc22220fefac040 87 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 79 6.1E-12 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS05190 37faff104bd6abc7abc22220fefac040 87 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 R615_RS05190 37faff104bd6abc7abc22220fefac040 87 Gene3D G3DSA:3.10.20.30 11 85 3.4E-18 T 22-04-2016 IPR012675 Beta-grasp domain R615_RS05190 37faff104bd6abc7abc22220fefac040 87 SUPERFAMILY SSF54292 9 86 1.97E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 R615_RS11495 febc419612cb74f9854b00ab602516c6 823 PANTHER PTHR33406:SF2 619 804 1.0E-100 T 22-04-2016 R615_RS11495 febc419612cb74f9854b00ab602516c6 823 PANTHER PTHR33406:SF2 14 111 1.0E-100 T 22-04-2016 R615_RS11495 febc419612cb74f9854b00ab602516c6 823 PANTHER PTHR33406:SF2 146 598 1.0E-100 T 22-04-2016 R615_RS11495 febc419612cb74f9854b00ab602516c6 823 PANTHER PTHR33406 619 804 1.0E-100 T 22-04-2016 R615_RS11495 febc419612cb74f9854b00ab602516c6 823 PANTHER PTHR33406 14 111 1.0E-100 T 22-04-2016 R615_RS11495 febc419612cb74f9854b00ab602516c6 823 PANTHER PTHR33406 146 598 1.0E-100 T 22-04-2016 R615_RS11495 febc419612cb74f9854b00ab602516c6 823 Pfam PF03176 MMPL family 188 424 5.9E-12 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 R615_RS11495 febc419612cb74f9854b00ab602516c6 823 Pfam PF03176 MMPL family 633 811 6.4E-15 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 R615_RS11495 febc419612cb74f9854b00ab602516c6 823 SUPERFAMILY SSF82866 199 394 3.79E-29 T 22-04-2016 R615_RS11495 febc419612cb74f9854b00ab602516c6 823 SUPERFAMILY SSF82866 627 805 7.59E-33 T 22-04-2016 R615_RS11495 febc419612cb74f9854b00ab602516c6 823 Gene3D G3DSA:1.20.1640.10 611 812 9.1E-30 T 22-04-2016 R615_RS11495 febc419612cb74f9854b00ab602516c6 823 Gene3D G3DSA:1.20.1640.10 201 394 6.5E-28 T 22-04-2016 R615_RS11750 f9f8c6e33d27feaa1cbcda1177c6c075 1535 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 428 465 2.0E-5 T 22-04-2016 IPR001434 Domain of unknown function DUF11 R615_RS11750 f9f8c6e33d27feaa1cbcda1177c6c075 1535 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 971 1001 5.2E-9 T 22-04-2016 IPR001434 Domain of unknown function DUF11 R615_RS11750 f9f8c6e33d27feaa1cbcda1177c6c075 1535 Pfam PF11824 Protein of unknown function (DUF3344) 22 272 3.4E-7 T 22-04-2016 IPR021779 Protein of unknown function DUF3344 R615_RS11750 f9f8c6e33d27feaa1cbcda1177c6c075 1535 Pfam PF01345 Domain of unknown function DUF11 933 1001 4.7E-8 T 22-04-2016 IPR001434 Domain of unknown function DUF11 R615_RS11750 f9f8c6e33d27feaa1cbcda1177c6c075 1535 Pfam PF01345 Domain of unknown function DUF11 408 464 4.6E-6 T 22-04-2016 IPR001434 Domain of unknown function DUF11 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 281 1.3E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.9E-17 T 22-04-2016 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 6.9E-17 T 22-04-2016 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 6.9E-17 T 22-04-2016 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 6.9E-17 T 22-04-2016 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 6.9E-17 T 22-04-2016 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 PANTHER PTHR22912:SF130 6 365 8.9E-119 T 22-04-2016 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 2.1E-11 T 22-04-2016 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-11 T 22-04-2016 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 2.1E-11 T 22-04-2016 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 173 2.1E-11 T 22-04-2016 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 SUPERFAMILY SSF51905 1 165 4.94E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 SUPERFAMILY SSF51905 195 324 4.94E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 Gene3D G3DSA:3.50.50.60 110 305 2.9E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 Gene3D G3DSA:3.50.50.60 7 109 6.4E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS00800 f9f6cf4a9fa69bb1547acb3dc65dc6fa 385 PANTHER PTHR22912 6 365 8.9E-119 T 22-04-2016 R615_RS04840 4bb7cbf98707242214090944ca0cd84e 289 PANTHER PTHR22572:SF105 5 271 2.4E-170 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 R615_RS04840 4bb7cbf98707242214090944ca0cd84e 289 PANTHER PTHR22572 5 271 2.4E-170 T 22-04-2016 R615_RS04840 4bb7cbf98707242214090944ca0cd84e 289 SUPERFAMILY SSF53448 5 288 4.98E-91 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS04840 4bb7cbf98707242214090944ca0cd84e 289 Pfam PF00483 Nucleotidyl transferase 5 241 2.7E-71 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 R615_RS04840 4bb7cbf98707242214090944ca0cd84e 289 Gene3D G3DSA:3.90.550.10 4 267 2.4E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS04840 4bb7cbf98707242214090944ca0cd84e 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 288 1.4E-154 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 R615_RS15655 988f74cccdbdfa574d9bfa2a46cd98d2 186 Pfam PF01292 Prokaryotic cytochrome b561 12 180 3.4E-33 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 R615_RS15655 988f74cccdbdfa574d9bfa2a46cd98d2 186 Gene3D G3DSA:1.20.950.20 89 172 1.1E-4 T 22-04-2016 R615_RS15655 988f74cccdbdfa574d9bfa2a46cd98d2 186 SUPERFAMILY SSF81342 7 179 1.1E-40 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 R615_RS15655 988f74cccdbdfa574d9bfa2a46cd98d2 186 PANTHER PTHR30529:SF5 4 184 1.1E-74 T 22-04-2016 R615_RS15655 988f74cccdbdfa574d9bfa2a46cd98d2 186 PANTHER PTHR30529 4 184 1.1E-74 T 22-04-2016 R615_RS17325 0f34ab21012aef6fffe74b4162e9ca9d 156 PANTHER PTHR38766:SF1 20 138 3.8E-15 T 22-04-2016 R615_RS17325 0f34ab21012aef6fffe74b4162e9ca9d 156 Pfam PF04347 Flagellar biosynthesis protein, FliO 75 154 1.5E-17 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 R615_RS17325 0f34ab21012aef6fffe74b4162e9ca9d 156 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 63 131 8.9E-20 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 R615_RS17325 0f34ab21012aef6fffe74b4162e9ca9d 156 PANTHER PTHR38766 20 138 3.8E-15 T 22-04-2016 R615_RS16060 5f4e5675489d558641363237b621df3b 435 SUPERFAMILY SSF56801 66 320 9.81E-19 T 22-04-2016 R615_RS16060 5f4e5675489d558641363237b621df3b 435 PANTHER PTHR36932 34 351 2.1E-40 T 22-04-2016 R615_RS16060 5f4e5675489d558641363237b621df3b 435 PANTHER PTHR36932:SF2 34 351 2.1E-40 T 22-04-2016 R615_RS16060 5f4e5675489d558641363237b621df3b 435 Pfam PF00501 AMP-binding enzyme 177 303 6.4E-7 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 R615_RS16060 5f4e5675489d558641363237b621df3b 435 Gene3D G3DSA:3.40.50.980 185 265 4.5E-5 T 22-04-2016 R615_RS12775 3f7c9c49db0435afc6b38c57b1d03a14 248 PIRSF PIRSF005426 3 248 9.0E-80 T 22-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 R615_RS12775 3f7c9c49db0435afc6b38c57b1d03a14 248 SUPERFAMILY SSF55469 4 247 1.69E-66 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 R615_RS12775 3f7c9c49db0435afc6b38c57b1d03a14 248 Pfam PF00881 Nitroreductase family 14 166 3.5E-17 T 22-04-2016 IPR029479 Nitroreductase R615_RS12775 3f7c9c49db0435afc6b38c57b1d03a14 248 Gene3D G3DSA:3.40.109.10 4 247 2.6E-70 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 R615_RS12775 3f7c9c49db0435afc6b38c57b1d03a14 248 PANTHER PTHR23026 4 192 5.9E-57 T 22-04-2016 R615_RS12775 3f7c9c49db0435afc6b38c57b1d03a14 248 PANTHER PTHR23026:SF98 4 192 5.9E-57 T 22-04-2016 R615_RS14080 cd263115d32b9570f9347fda948c3b3e 108 SUPERFAMILY SSF82771 16 88 1.83E-7 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily R615_RS14080 cd263115d32b9570f9347fda948c3b3e 108 Pfam PF01541 GIY-YIG catalytic domain 16 89 1.5E-9 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily R615_RS14080 cd263115d32b9570f9347fda948c3b3e 108 PANTHER PTHR34477 13 103 1.3E-29 T 22-04-2016 R615_RS14080 cd263115d32b9570f9347fda948c3b3e 108 PANTHER PTHR34477:SF1 13 103 1.3E-29 T 22-04-2016 R615_RS01830 778d3c60a32f3ee59a09b73dbb5ece2e 701 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 267 692 1.8E-25 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit R615_RS01830 778d3c60a32f3ee59a09b73dbb5ece2e 701 PANTHER PTHR33362 81 701 3.4E-12 T 22-04-2016 R615_RS12650 b6af89fc9c8ad4f4263ff5081267e3cf 349 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 33 349 1.7E-152 T 22-04-2016 IPR016936 Uncharacterised conserved protein UCP029693 R615_RS12650 b6af89fc9c8ad4f4263ff5081267e3cf 349 PIRSF PIRSF029693 2 349 1.7E-150 T 22-04-2016 IPR016936 Uncharacterised conserved protein UCP029693 R615_RS11585 7ac4576eaf00db116fdbecb87b5bd633 334 PANTHER PTHR11019:SF140 228 331 4.2E-28 T 22-04-2016 R615_RS11585 7ac4576eaf00db116fdbecb87b5bd633 334 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 204 7.2E-47 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS11585 7ac4576eaf00db116fdbecb87b5bd633 334 Pfam PF12833 Helix-turn-helix domain 255 331 3.6E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS11585 7ac4576eaf00db116fdbecb87b5bd633 334 Gene3D G3DSA:1.10.10.60 283 332 8.1E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS11585 7ac4576eaf00db116fdbecb87b5bd633 334 SMART SM00342 248 330 3.9E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS11585 7ac4576eaf00db116fdbecb87b5bd633 334 SUPERFAMILY SSF46689 283 332 4.93E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS11585 7ac4576eaf00db116fdbecb87b5bd633 334 PANTHER PTHR11019 228 331 4.2E-28 T 22-04-2016 R615_RS07725 34a51d973b652671c033fee7e84d5d26 639 SMART SM00563 469 585 5.0E-27 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS07725 34a51d973b652671c033fee7e84d5d26 639 Gene3D G3DSA:3.40.1130.10 453 582 1.6E-14 T 22-04-2016 R615_RS07725 34a51d973b652671c033fee7e84d5d26 639 PANTHER PTHR10434:SF15 358 635 6.5E-137 T 22-04-2016 R615_RS07725 34a51d973b652671c033fee7e84d5d26 639 Pfam PF01553 Acyltransferase 455 581 3.4E-24 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 R615_RS07725 34a51d973b652671c033fee7e84d5d26 639 Pfam PF05977 Transmembrane secretion effector 77 317 3.1E-10 T 22-04-2016 IPR010290 Transmembrane secretion effector R615_RS07725 34a51d973b652671c033fee7e84d5d26 639 SUPERFAMILY SSF69593 366 585 1.44E-30 T 22-04-2016 R615_RS07725 34a51d973b652671c033fee7e84d5d26 639 SUPERFAMILY SSF103473 14 440 1.01E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS07725 34a51d973b652671c033fee7e84d5d26 639 PANTHER PTHR10434 358 635 6.5E-137 T 22-04-2016 R615_RS07725 34a51d973b652671c033fee7e84d5d26 639 Gene3D G3DSA:1.20.1250.20 31 208 1.1E-5 T 22-04-2016 R615_RS07725 34a51d973b652671c033fee7e84d5d26 639 Gene3D G3DSA:1.20.1250.20 239 433 1.7E-7 T 22-04-2016 R615_RS13935 533843c81b25197af851bd88e2862d51 166 SUPERFAMILY SSF56925 29 154 1.26E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS13935 533843c81b25197af851bd88e2862d51 166 Gene3D G3DSA:2.40.160.20 10 150 2.0E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS13935 533843c81b25197af851bd88e2862d51 166 Pfam PF13505 Outer membrane protein beta-barrel domain 10 150 1.2E-7 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel R615_RS15265 332148e9a455efbd35937f88ff4dce4e 335 SUPERFAMILY SSF51735 138 301 2.91E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS15265 332148e9a455efbd35937f88ff4dce4e 335 Pfam PF00107 Zinc-binding dehydrogenase 175 297 5.1E-21 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 R615_RS15265 332148e9a455efbd35937f88ff4dce4e 335 SMART SM00829 12 331 4.4E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 R615_RS15265 332148e9a455efbd35937f88ff4dce4e 335 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 R615_RS15265 332148e9a455efbd35937f88ff4dce4e 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 133 7.7E-29 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 R615_RS15265 332148e9a455efbd35937f88ff4dce4e 335 PANTHER PTHR11695 14 335 3.2E-116 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 R615_RS15265 332148e9a455efbd35937f88ff4dce4e 335 Gene3D G3DSA:3.90.180.10 2 169 3.7E-59 T 22-04-2016 IPR011032 GroES-like R615_RS15265 332148e9a455efbd35937f88ff4dce4e 335 SUPERFAMILY SSF50129 3 159 5.17E-47 T 22-04-2016 IPR011032 GroES-like R615_RS15265 332148e9a455efbd35937f88ff4dce4e 335 Gene3D G3DSA:3.40.50.720 170 278 8.4E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS15265 332148e9a455efbd35937f88ff4dce4e 335 PANTHER PTHR11695:SF582 14 335 3.2E-116 T 22-04-2016 R615_RS02310 4a3b909124f1eab14d48e1cdbfbcef94 141 Gene3D G3DSA:3.40.190.10 25 138 6.6E-15 T 22-04-2016 R615_RS02310 4a3b909124f1eab14d48e1cdbfbcef94 141 SUPERFAMILY SSF53850 22 138 2.08E-18 T 22-04-2016 R615_RS12620 5d6e419fb894e08c2bf9e0aca5c87ef5 458 Pfam PF01618 MotA/TolQ/ExbB proton channel family 327 437 8.1E-28 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 R615_RS12620 5d6e419fb894e08c2bf9e0aca5c87ef5 458 PANTHER PTHR30625 17 455 3.8E-82 T 22-04-2016 R615_RS12620 5d6e419fb894e08c2bf9e0aca5c87ef5 458 PANTHER PTHR30625:SF0 17 455 3.8E-82 T 22-04-2016 R615_RS12620 5d6e419fb894e08c2bf9e0aca5c87ef5 458 PIRSF PIRSF037714 1 458 4.1E-148 T 22-04-2016 IPR017270 Putative MotA/TolQ/ExbB family protein R615_RS01435 7930ac1367ad62b7fa80e5d7ed307b2b 115 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 96 113 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site R615_RS01435 7930ac1367ad62b7fa80e5d7ed307b2b 115 Gene3D G3DSA:2.60.300.12 5 101 1.3E-30 T 22-04-2016 IPR000361 FeS cluster biogenesis R615_RS01435 7930ac1367ad62b7fa80e5d7ed307b2b 115 SUPERFAMILY SSF89360 6 101 2.55E-27 T 22-04-2016 IPR000361 FeS cluster biogenesis R615_RS01435 7930ac1367ad62b7fa80e5d7ed307b2b 115 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 11 115 4.4E-36 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 R615_RS01435 7930ac1367ad62b7fa80e5d7ed307b2b 115 Pfam PF01521 Iron-sulphur cluster biosynthesis 11 110 1.0E-17 T 22-04-2016 IPR000361 FeS cluster biogenesis R615_RS01435 7930ac1367ad62b7fa80e5d7ed307b2b 115 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 115 32.47 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 R615_RS01435 7930ac1367ad62b7fa80e5d7ed307b2b 115 PANTHER PTHR10072 10 115 1.5E-42 T 22-04-2016 R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 PIRSF PIRSF038980 3 1654 0.0 T 22-04-2016 IPR026284 Alpha-2-macroglobulin domain protein, bacteria R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 SMART SM01359 762 909 2.9E-28 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 Gene3D G3DSA:1.50.10.20 1173 1435 3.5E-27 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 SMART SM01360 973 1060 1.8E-26 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 Pfam PF00207 Alpha-2-macroglobulin family 980 1060 6.0E-11 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 PANTHER PTHR11412 264 965 4.5E-66 T 22-04-2016 R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 PANTHER PTHR11412 1636 1653 4.5E-66 T 22-04-2016 R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 764 908 9.6E-9 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 PANTHER PTHR11412:SF104 264 965 4.5E-66 T 22-04-2016 R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 PANTHER PTHR11412:SF104 1636 1653 4.5E-66 T 22-04-2016 R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 300 394 3.3E-15 T 22-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 SUPERFAMILY SSF48239 1172 1431 6.95E-32 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1174 1199 1.5E-5 T 22-04-2016 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming R615_RS16000 a246ab9b7bcc59c08bb76f8c0996c81e 1654 Pfam PF01835 MG2 domain 400 491 1.1E-18 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 R615_RS00325 5dda0cf54680cbf80ce74a877a907368 211 Pfam PF13785 Domain of unknown function (DUF4178) 31 194 2.7E-16 T 22-04-2016 IPR025235 Domain of unknown function DUF4178 R615_RS01625 a7d75e359c24fd1f3ab59ca9af40edbc 135 Pfam PF04134 Protein of unknown function, DUF393 6 115 1.3E-26 T 22-04-2016 IPR007263 Protein of unknown function DUF393 R615_RS01625 a7d75e359c24fd1f3ab59ca9af40edbc 135 Gene3D G3DSA:3.40.30.10 3 42 3.1E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS01625 a7d75e359c24fd1f3ab59ca9af40edbc 135 PANTHER PTHR34290 3 114 2.9E-34 T 22-04-2016 R615_RS13990 e50acb493587d124112e2867536bec68 586 PANTHER PTHR35399 426 581 4.9E-14 T 22-04-2016 R615_RS13990 e50acb493587d124112e2867536bec68 586 PANTHER PTHR35399 193 398 4.9E-14 T 22-04-2016 R615_RS13990 e50acb493587d124112e2867536bec68 586 Pfam PF05787 Bacterial protein of unknown function (DUF839) 234 577 1.3E-37 T 22-04-2016 IPR008557 Protein of unknown function DUF839 R615_RS05895 54bff1692d78a202eee0ace96fb10ea3 200 PANTHER PTHR30546 4 196 8.5E-74 T 22-04-2016 R615_RS05895 54bff1692d78a202eee0ace96fb10ea3 200 SUPERFAMILY SSF52218 5 196 2.41E-61 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS05895 54bff1692d78a202eee0ace96fb10ea3 200 Pfam PF03358 NADPH-dependent FMN reductase 13 130 5.4E-9 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 R615_RS05895 54bff1692d78a202eee0ace96fb10ea3 200 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 6 196 1.1E-46 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 R615_RS05895 54bff1692d78a202eee0ace96fb10ea3 200 Gene3D G3DSA:3.40.50.360 2 196 7.7E-69 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS10915 f3d2415026ccfb4ad86e11d67c23bc30 294 SUPERFAMILY SSF53474 38 276 3.43E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS10915 f3d2415026ccfb4ad86e11d67c23bc30 294 Pfam PF12146 Serine aminopeptidase, S33 84 206 3.6E-19 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 R615_RS10915 f3d2415026ccfb4ad86e11d67c23bc30 294 Gene3D G3DSA:3.40.50.1820 42 258 4.8E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS10915 f3d2415026ccfb4ad86e11d67c23bc30 294 PANTHER PTHR12277 32 286 2.4E-41 T 22-04-2016 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 PANTHER PTHR30523:SF3 2 864 0.0 T 22-04-2016 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 Pfam PF00311 Phosphoenolpyruvate carboxylase 118 864 8.4E-277 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 122 135 1.5E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 175 191 1.5E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 519 539 1.5E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 370 390 1.5E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 693 719 1.5E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 561 590 1.5E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 234 249 1.5E-69 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 SUPERFAMILY SSF51621 2 864 1.18E-293 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 521 533 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 864 17.621 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 Gene3D G3DSA:1.20.1440.90 262 373 1.9E-23 T 22-04-2016 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 123 134 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 R615_RS12465 cd0394501be5744d0d4feb5312875b01 864 PANTHER PTHR30523 2 864 0.0 T 22-04-2016 R615_RS17445 f74e49a3754e8386298809c98f679e30 175 Gene3D G3DSA:3.30.1360.100 96 174 2.4E-22 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain R615_RS17445 f74e49a3754e8386298809c98f679e30 175 Pfam PF04612 Type II secretion system (T2SS), protein M 19 173 1.5E-32 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 R615_RS17445 f74e49a3754e8386298809c98f679e30 175 SUPERFAMILY SSF103054 96 172 6.28E-20 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain R615_RS17445 f74e49a3754e8386298809c98f679e30 175 PIRSF PIRSF006291 14 173 1.6E-29 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 R615_RS00355 d363b40a5035c1a75fa57b7326df55b6 236 Gene3D G3DSA:3.60.10.10 31 229 8.9E-9 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase R615_RS00355 d363b40a5035c1a75fa57b7326df55b6 236 PANTHER PTHR14859 42 235 6.7E-19 T 22-04-2016 IPR027317 PGAP2-interacting protein R615_RS00355 d363b40a5035c1a75fa57b7326df55b6 236 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 32 225 6.7E-19 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase R615_RS00355 d363b40a5035c1a75fa57b7326df55b6 236 SUPERFAMILY SSF56219 27 235 5.63E-30 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase R615_RS17540 b3668a5a481d78cb9bef8743be343a98 921 SUPERFAMILY SSF56925 749 911 6.54E-9 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS17540 b3668a5a481d78cb9bef8743be343a98 921 Gene3D G3DSA:4.10.1080.10 283 418 7.3E-10 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17540 b3668a5a481d78cb9bef8743be343a98 921 Gene3D G3DSA:4.10.1080.10 650 704 1.7E-6 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17540 b3668a5a481d78cb9bef8743be343a98 921 Gene3D G3DSA:4.10.1080.10 488 640 3.7E-12 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS17540 b3668a5a481d78cb9bef8743be343a98 921 Gene3D G3DSA:2.40.160.20 734 901 7.5E-11 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS17540 b3668a5a481d78cb9bef8743be343a98 921 Pfam PF13505 Outer membrane protein beta-barrel domain 733 899 1.3E-9 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel R615_RS00435 a43190866c7d409f7ff8cf5c897d4633 88 Pfam PF07615 YKOF-related Family 5 57 2.0E-5 T 22-04-2016 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative R615_RS00435 a43190866c7d409f7ff8cf5c897d4633 88 Gene3D G3DSA:3.30.70.930 1 62 1.6E-10 T 22-04-2016 IPR029756 MTH1187/YkoF-like R615_RS00435 a43190866c7d409f7ff8cf5c897d4633 88 SUPERFAMILY SSF89957 1 77 3.53E-18 T 22-04-2016 IPR029756 MTH1187/YkoF-like R615_RS07940 f5675dab7aec5820800ee910388b4bb5 254 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 2 252 42.259 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 R615_RS07940 f5675dab7aec5820800ee910388b4bb5 254 Pfam PF02348 Cytidylyltransferase 6 225 6.6E-56 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 R615_RS07940 f5675dab7aec5820800ee910388b4bb5 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 245 1.4E-91 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 R615_RS07940 f5675dab7aec5820800ee910388b4bb5 254 PANTHER PTHR21485:SF4 6 253 6.1E-108 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 R615_RS07940 f5675dab7aec5820800ee910388b4bb5 254 PANTHER PTHR21485 6 253 6.1E-108 T 22-04-2016 R615_RS07940 f5675dab7aec5820800ee910388b4bb5 254 Gene3D G3DSA:3.90.550.10 5 251 1.2E-76 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS07940 f5675dab7aec5820800ee910388b4bb5 254 SUPERFAMILY SSF53448 4 250 2.93E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS07330 2c62bc71e9f28bffa8503fb33d694c3b 140 PANTHER PTHR10516:SF320 18 140 5.1E-50 T 22-04-2016 R615_RS07330 2c62bc71e9f28bffa8503fb33d694c3b 140 SUPERFAMILY SSF54534 10 138 7.07E-50 T 22-04-2016 R615_RS07330 2c62bc71e9f28bffa8503fb33d694c3b 140 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 48 136 1.0E-25 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 R615_RS07330 2c62bc71e9f28bffa8503fb33d694c3b 140 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 10 41 6.1E-10 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 R615_RS07330 2c62bc71e9f28bffa8503fb33d694c3b 140 Gene3D G3DSA:3.10.50.40 11 139 2.6E-51 T 22-04-2016 R615_RS07330 2c62bc71e9f28bffa8503fb33d694c3b 140 PANTHER PTHR10516 18 140 5.1E-50 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type R615_RS05540 416b352ffae78a09baa98bf770019927 135 Gene3D G3DSA:1.20.120.50 13 127 2.1E-20 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 R615_RS05540 416b352ffae78a09baa98bf770019927 135 ProSitePatterns PS00550 Hemerythrin family signature. 54 77 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 R615_RS05540 416b352ffae78a09baa98bf770019927 135 SUPERFAMILY SSF47188 10 127 3.01E-22 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 R615_RS05540 416b352ffae78a09baa98bf770019927 135 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 13 127 4.8E-19 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 R615_RS05540 416b352ffae78a09baa98bf770019927 135 PANTHER PTHR37164 1 130 1.2E-12 T 22-04-2016 R615_RS12750 9d7a194b4bb8c2804d403f03153eae14 176 PANTHER PTHR30543:SF6 1 176 2.6E-41 T 22-04-2016 R615_RS12750 9d7a194b4bb8c2804d403f03153eae14 176 PANTHER PTHR30543 1 176 2.6E-41 T 22-04-2016 R615_RS12750 9d7a194b4bb8c2804d403f03153eae14 176 SUPERFAMILY SSF52218 1 170 9.83E-38 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS12750 9d7a194b4bb8c2804d403f03153eae14 176 Pfam PF03358 NADPH-dependent FMN reductase 1 130 9.5E-30 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 R615_RS12750 9d7a194b4bb8c2804d403f03153eae14 176 Gene3D G3DSA:3.40.50.360 1 175 5.3E-39 T 22-04-2016 IPR029039 Flavoprotein-like domain R615_RS06850 a95bb82e79d3ce0f05e90052eea703d7 80 Pfam PF01206 Sulfurtransferase TusA 10 78 3.9E-22 T 22-04-2016 IPR001455 TusA-like domain R615_RS06850 a95bb82e79d3ce0f05e90052eea703d7 80 Gene3D G3DSA:3.30.110.40 6 79 1.7E-25 T 22-04-2016 IPR001455 TusA-like domain R615_RS06850 a95bb82e79d3ce0f05e90052eea703d7 80 SUPERFAMILY SSF64307 8 79 9.16E-24 T 22-04-2016 IPR001455 TusA-like domain R615_RS06850 a95bb82e79d3ce0f05e90052eea703d7 80 PANTHER PTHR33279 3 80 5.7E-21 T 22-04-2016 R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 PANTHER PTHR24322 165 197 4.9E-69 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 PANTHER PTHR24322 16 149 4.9E-69 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 Gene3D G3DSA:3.40.50.720 4 238 8.1E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 SUPERFAMILY SSF51735 9 241 3.33E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.9E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.9E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 1.9E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.9E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.9E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 PANTHER PTHR24322:SF337 165 197 4.9E-69 T 22-04-2016 R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 PANTHER PTHR24322:SF337 16 149 4.9E-69 T 22-04-2016 R615_RS06055 16140de7d4d09e8a2e8122ec1d45a4c1 247 Pfam PF00106 short chain dehydrogenase 13 209 3.6E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS13050 6d1eda5b835d1905467397c8f3ee5cc9 502 SUPERFAMILY SSF56317 210 482 3.79E-42 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS13050 6d1eda5b835d1905467397c8f3ee5cc9 502 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 6 487 21.672 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 R615_RS13050 6d1eda5b835d1905467397c8f3ee5cc9 502 PANTHER PTHR38686 1 502 7.8E-95 T 22-04-2016 R615_RS13050 6d1eda5b835d1905467397c8f3ee5cc9 502 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 60 449 2.7E-91 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 R615_RS13050 6d1eda5b835d1905467397c8f3ee5cc9 502 Pfam PF00795 Carbon-nitrogen hydrolase 214 464 1.5E-31 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS13050 6d1eda5b835d1905467397c8f3ee5cc9 502 Gene3D G3DSA:3.60.110.10 208 480 2.0E-27 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 R615_RS07910 c8c34f00b1e75124489e5b95433596e7 375 SMART SM00283 65 274 1.6E-21 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS07910 c8c34f00b1e75124489e5b95433596e7 375 Gene3D G3DSA:1.10.287.950 74 257 2.0E-43 T 22-04-2016 R615_RS07910 c8c34f00b1e75124489e5b95433596e7 375 PANTHER PTHR32089 82 250 1.3E-42 T 22-04-2016 R615_RS07910 c8c34f00b1e75124489e5b95433596e7 375 Pfam PF13682 Chemoreceptor zinc-binding domain 268 333 3.0E-15 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 R615_RS07910 c8c34f00b1e75124489e5b95433596e7 375 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 117 258 6.5E-35 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 R615_RS07910 c8c34f00b1e75124489e5b95433596e7 375 SUPERFAMILY SSF58104 58 292 7.19E-47 T 22-04-2016 R615_RS05510 9dd151be185f8fa7e758f4d69eb24796 300 SUPERFAMILY SSF103481 50 150 1.83E-9 T 22-04-2016 R615_RS05510 9dd151be185f8fa7e758f4d69eb24796 300 PANTHER PTHR12715 13 299 6.5E-31 T 22-04-2016 R615_RS05510 9dd151be185f8fa7e758f4d69eb24796 300 SUPERFAMILY SSF103481 197 291 1.44E-15 T 22-04-2016 R615_RS05510 9dd151be185f8fa7e758f4d69eb24796 300 Pfam PF00892 EamA-like transporter family 158 287 2.2E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS05510 9dd151be185f8fa7e758f4d69eb24796 300 Pfam PF00892 EamA-like transporter family 15 146 2.1E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 R615_RS11535 fcc2029138c320b0a145737511589903 294 Gene3D G3DSA:2.60.200.30 149 262 1.8E-43 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 R615_RS11535 fcc2029138c320b0a145737511589903 294 Gene3D G3DSA:3.40.50.10330 2 148 4.3E-38 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 R615_RS11535 fcc2029138c320b0a145737511589903 294 Pfam PF01513 ATP-NAD kinase 6 272 7.8E-64 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 R615_RS11535 fcc2029138c320b0a145737511589903 294 SUPERFAMILY SSF111331 6 289 8.11E-89 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain R615_RS11535 fcc2029138c320b0a145737511589903 294 PANTHER PTHR20275 2 289 1.1E-97 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 R615_RS11535 fcc2029138c320b0a145737511589903 294 Hamap MF_00361 NAD kinase [nadK]. 5 288 34.033 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 R615_RS15210 3a94278ae8809656edfbaa165a704ecd 253 PIRSF PIRSF028069 1 253 4.1E-74 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 R615_RS15210 3a94278ae8809656edfbaa165a704ecd 253 Pfam PF11932 Protein of unknown function (DUF3450) 12 248 1.5E-86 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 SMART SM00384 285 297 7.4 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 SMART SM00384 342 354 7.4 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 SMART SM00384 323 335 7.4 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 SMART SM00384 266 278 7.4 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 SMART SM00384 191 203 7.4 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 SMART SM00384 210 222 0.66 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 SMART SM00384 359 371 10.0 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 SMART SM00384 304 316 7.4 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 SMART SM00384 227 239 0.33 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 SMART SM00384 247 259 0.35 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 PRINTS PR00929 AT-hook-like domain signature 245 255 3.6E-6 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 PRINTS PR00929 AT-hook-like domain signature 210 220 3.6E-6 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 PRINTS PR00929 AT-hook-like domain signature 225 236 3.6E-6 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 Pfam PF02178 AT hook motif 247 258 0.025 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 Pfam PF02178 AT hook motif 210 220 0.058 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 Pfam PF02178 AT hook motif 361 370 0.38 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 Pfam PF02178 AT hook motif 227 238 0.03 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 Pfam PF02178 AT hook motif 287 296 0.15 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 Pfam PF02178 AT hook motif 325 334 0.15 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 Pfam PF02178 AT hook motif 344 353 0.15 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 Pfam PF02178 AT hook motif 268 277 0.15 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 Pfam PF02178 AT hook motif 193 202 0.15 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS17620 632540b377eae6784b179d4d19ff13e4 401 Pfam PF02178 AT hook motif 306 315 0.15 T 22-04-2016 IPR017956 AT hook, DNA-binding motif GO:0003677 R615_RS11670 0866397d086437fb31bda21dd77690fb 89 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 1.3E-30 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted R615_RS11670 0866397d086437fb31bda21dd77690fb 89 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 6.0E-31 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted R615_RS07140 f96ffbbd58d64efe7d99bce30ae7ed08 379 PIRSF PIRSF000345 3 331 3.1E-97 T 22-04-2016 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 R615_RS07140 f96ffbbd58d64efe7d99bce30ae7ed08 379 PANTHER PTHR11351 11 345 9.9E-140 T 22-04-2016 R615_RS07140 f96ffbbd58d64efe7d99bce30ae7ed08 379 PRINTS PR00075 Fatty acid desaturase family 1 signature 41 63 7.7E-30 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 R615_RS07140 f96ffbbd58d64efe7d99bce30ae7ed08 379 PRINTS PR00075 Fatty acid desaturase family 1 signature 191 212 7.7E-30 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 R615_RS07140 f96ffbbd58d64efe7d99bce30ae7ed08 379 PRINTS PR00075 Fatty acid desaturase family 1 signature 234 248 7.7E-30 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 R615_RS07140 f96ffbbd58d64efe7d99bce30ae7ed08 379 PRINTS PR00075 Fatty acid desaturase family 1 signature 160 178 7.7E-30 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 R615_RS07140 f96ffbbd58d64efe7d99bce30ae7ed08 379 PRINTS PR00075 Fatty acid desaturase family 1 signature 64 84 7.7E-30 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 R615_RS07140 f96ffbbd58d64efe7d99bce30ae7ed08 379 PRINTS PR00075 Fatty acid desaturase family 1 signature 102 131 7.7E-30 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 R615_RS07140 f96ffbbd58d64efe7d99bce30ae7ed08 379 PANTHER PTHR11351:SF35 11 345 9.9E-140 T 22-04-2016 R615_RS07140 f96ffbbd58d64efe7d99bce30ae7ed08 379 Pfam PF00487 Fatty acid desaturase 44 260 1.9E-17 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 R615_RS07685 75d281682fef038c4f1843510c6d4874 152 PIRSF PIRSF000714 1 141 1.3E-49 T 22-04-2016 IPR026026 Histidine triad hydrolase, Hint-type R615_RS07685 75d281682fef038c4f1843510c6d4874 152 PANTHER PTHR23089 14 132 4.7E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein R615_RS07685 75d281682fef038c4f1843510c6d4874 152 Gene3D G3DSA:3.30.428.10 9 138 6.4E-33 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 R615_RS07685 75d281682fef038c4f1843510c6d4874 152 SUPERFAMILY SSF54197 10 133 3.19E-32 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 R615_RS07685 75d281682fef038c4f1843510c6d4874 152 PANTHER PTHR23089:SF13 14 132 4.7E-20 T 22-04-2016 R615_RS07685 75d281682fef038c4f1843510c6d4874 152 Pfam PF01230 HIT domain 10 97 7.9E-13 T 22-04-2016 IPR001310 Histidine triad (HIT) protein R615_RS07550 2a08c56af059d366e2381867d51dc05c 166 Pfam PF05751 FixH 9 151 1.6E-28 T 22-04-2016 IPR008620 Nitrogen fixation protein FixH R615_RS15685 c8c0991f2b286fa3c5c2070246519589 182 Pfam PF11845 Protein of unknown function (DUF3365) 6 176 2.2E-27 T 22-04-2016 IPR021796 Protein of unknown function DUF3365 R615_RS14945 ff87d4777243c9c350707895d4cc4675 179 Pfam PF04351 Pilus assembly protein, PilP 27 173 2.1E-48 T 22-04-2016 IPR007446 Pilus assembly protein PilP R615_RS14945 ff87d4777243c9c350707895d4cc4675 179 PIRSF PIRSF016481 1 176 1.9E-48 T 22-04-2016 IPR007446 Pilus assembly protein PilP R615_RS05605 9989fd331a43961b75275e73c9b21154 566 SUPERFAMILY SSF52540 2 342 2.16E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05605 9989fd331a43961b75275e73c9b21154 566 Gene3D G3DSA:3.40.50.300 3 345 1.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS05605 9989fd331a43961b75275e73c9b21154 566 Pfam PF13175 AAA ATPase domain 3 321 6.3E-28 T 22-04-2016 R615_RS00685 a00ead6b6c4ef0d9528bc7c2e4ddcbcc 311 PIRSF PIRSF003097 12 308 3.1E-68 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 R615_RS00685 a00ead6b6c4ef0d9528bc7c2e4ddcbcc 311 Pfam PF02687 FtsX-like permease family 188 302 2.7E-7 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 R615_RS12540 5c58405e4cbba9573d5e01b643e4dc51 334 PIRSF PIRSF005427 1 324 7.4E-84 T 22-04-2016 IPR005588 MucB/RseB R615_RS12540 5c58405e4cbba9573d5e01b643e4dc51 334 PANTHER PTHR38782 3 324 2.7E-67 T 22-04-2016 R615_RS12540 5c58405e4cbba9573d5e01b643e4dc51 334 PANTHER PTHR38782:SF1 3 324 2.7E-67 T 22-04-2016 R615_RS12540 5c58405e4cbba9573d5e01b643e4dc51 334 Pfam PF03888 MucB/RseB N-terminal domain 28 199 5.0E-56 T 22-04-2016 IPR033434 MucB/RseB, N-terminal R615_RS12540 5c58405e4cbba9573d5e01b643e4dc51 334 Gene3D G3DSA:2.50.20.10 118 195 1.2E-6 T 22-04-2016 R615_RS12540 5c58405e4cbba9573d5e01b643e4dc51 334 Pfam PF17188 MucB/RseB C-terminal domain 222 319 1.5E-23 T 22-04-2016 IPR033436 MucB/RseB, C-terminal R615_RS14585 0618b21e52c848d28e4c0e77200fd00e 297 Pfam PF12697 Alpha/beta hydrolase family 51 287 2.2E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14585 0618b21e52c848d28e4c0e77200fd00e 297 SUPERFAMILY SSF53474 28 294 1.06E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS14585 0618b21e52c848d28e4c0e77200fd00e 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 240 254 2.4E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14585 0618b21e52c848d28e4c0e77200fd00e 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 2.4E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14585 0618b21e52c848d28e4c0e77200fd00e 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 132 145 2.4E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14585 0618b21e52c848d28e4c0e77200fd00e 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 74 89 2.4E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS14585 0618b21e52c848d28e4c0e77200fd00e 297 Gene3D G3DSA:3.40.50.1820 23 294 1.6E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS14585 0618b21e52c848d28e4c0e77200fd00e 297 PANTHER PTHR10992 25 296 3.8E-53 T 22-04-2016 R615_RS17300 16258bed3d7ba9857a5f0fb9977ec099 131 PANTHER PTHR23501:SF51 1 47 1.9E-15 T 22-04-2016 R615_RS17300 16258bed3d7ba9857a5f0fb9977ec099 131 PANTHER PTHR23501 1 47 1.9E-15 T 22-04-2016 R615_RS11805 3c0b860a02ee9a79f84d990711aafc99 62 PANTHER PTHR37531 1 55 8.6E-18 T 22-04-2016 R615_RS11805 3c0b860a02ee9a79f84d990711aafc99 62 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 55 1.0E-20 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 R615_RS11805 3c0b860a02ee9a79f84d990711aafc99 62 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 6.1E-18 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 R615_RS11805 3c0b860a02ee9a79f84d990711aafc99 62 PANTHER PTHR37531:SF1 1 55 8.6E-18 T 22-04-2016 R615_RS13810 30bf6da4d10dda380fff1ffbfb5d38b8 283 PANTHER PTHR35271 102 281 3.8E-15 T 22-04-2016 R615_RS13810 30bf6da4d10dda380fff1ffbfb5d38b8 283 Gene3D G3DSA:3.40.50.2300 107 232 2.5E-6 T 22-04-2016 R615_RS12855 6c45ca7969ff723f052160cc38e07482 419 PANTHER PTHR30349 193 406 1.7E-16 T 22-04-2016 R615_RS12855 6c45ca7969ff723f052160cc38e07482 419 SUPERFAMILY SSF56349 112 163 1.32E-33 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 R615_RS12855 6c45ca7969ff723f052160cc38e07482 419 SUPERFAMILY SSF56349 190 407 1.32E-33 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 R615_RS12855 6c45ca7969ff723f052160cc38e07482 419 PANTHER PTHR30349:SF20 193 406 1.7E-16 T 22-04-2016 R615_RS12855 6c45ca7969ff723f052160cc38e07482 419 Gene3D G3DSA:1.10.443.10 240 405 7.7E-24 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 R615_RS12855 6c45ca7969ff723f052160cc38e07482 419 Pfam PF00589 Phage integrase family 243 405 1.6E-10 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 R615_RS11275 fd81d3574559506c4e8eb12e2ebccfd6 230 SUPERFAMILY SSF52317 1 209 1.78E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS11275 fd81d3574559506c4e8eb12e2ebccfd6 230 Gene3D G3DSA:3.40.50.880 1 227 1.3E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS11275 fd81d3574559506c4e8eb12e2ebccfd6 230 Pfam PF00117 Glutamine amidotransferase class-I 41 178 4.3E-21 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 R615_RS11275 fd81d3574559506c4e8eb12e2ebccfd6 230 PANTHER PTHR11922:SF45 42 203 1.0E-64 T 22-04-2016 R615_RS11275 fd81d3574559506c4e8eb12e2ebccfd6 230 PANTHER PTHR11922 42 203 1.0E-64 T 22-04-2016 R615_RS10160 c356d7b2cc11fc78f9d9aafeb19d66db 872 SUPERFAMILY SSF46894 807 867 4.42E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 R615_RS10160 c356d7b2cc11fc78f9d9aafeb19d66db 872 SMART SM00421 809 866 3.0E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS10160 c356d7b2cc11fc78f9d9aafeb19d66db 872 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 842 854 8.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS10160 c356d7b2cc11fc78f9d9aafeb19d66db 872 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 826 842 8.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS10160 c356d7b2cc11fc78f9d9aafeb19d66db 872 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 812 826 8.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS10160 c356d7b2cc11fc78f9d9aafeb19d66db 872 Gene3D G3DSA:1.10.10.10 807 869 2.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS10160 c356d7b2cc11fc78f9d9aafeb19d66db 872 Pfam PF00196 Bacterial regulatory proteins, luxR family 811 864 9.1E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 R615_RS12625 fa3fd5ee5e79831c0034aa669d3684a2 262 Pfam PF11932 Protein of unknown function (DUF3450) 15 255 1.7E-90 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 R615_RS12625 fa3fd5ee5e79831c0034aa669d3684a2 262 PIRSF PIRSF028069 8 262 6.2E-80 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 R615_RS07215 8f7df0f312184e96f17f47735fb4010e 495 PANTHER PTHR35861:SF1 298 487 1.8E-57 T 22-04-2016 R615_RS07215 8f7df0f312184e96f17f47735fb4010e 495 PANTHER PTHR35861 298 487 1.8E-57 T 22-04-2016 R615_RS07215 8f7df0f312184e96f17f47735fb4010e 495 Pfam PF04984 Phage tail sheath protein 290 488 4.5E-29 T 22-04-2016 IPR007067 Tail sheath protein R615_RS13625 c685b35812761b9c42ab7494f5db8488 114 Pfam PF07238 PilZ domain 9 112 1.3E-6 T 22-04-2016 IPR009875 PilZ domain GO:0035438 R615_RS13625 c685b35812761b9c42ab7494f5db8488 114 SUPERFAMILY SSF141371 5 98 5.49E-6 T 22-04-2016 R615_RS11270 569d0c274357a8e309c1e59b741e4a69 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 117 7.7E-19 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 R615_RS11270 569d0c274357a8e309c1e59b741e4a69 135 PANTHER PTHR33337 1 135 7.7E-22 T 22-04-2016 R615_RS11270 569d0c274357a8e309c1e59b741e4a69 135 SUPERFAMILY SSF51316 1 135 7.11E-38 T 22-04-2016 IPR011057 Mss4-like R615_RS11270 569d0c274357a8e309c1e59b741e4a69 135 Gene3D G3DSA:3.90.1590.10 2 134 1.2E-32 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 R615_RS06415 84fe0f575f317e25f4bb9fdf65a5a8a6 284 Pfam PF04116 Fatty acid hydroxylase superfamily 89 223 7.6E-28 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 R615_RS06415 84fe0f575f317e25f4bb9fdf65a5a8a6 284 PANTHER PTHR21624 10 281 8.8E-69 T 22-04-2016 R615_RS11375 f8c867adec419cdf3ba88c3a33afb86f 223 Gene3D G3DSA:3.80.10.10 51 167 7.1E-9 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like R615_RS11375 f8c867adec419cdf3ba88c3a33afb86f 223 SUPERFAMILY SSF52058 51 190 5.78E-11 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like R615_RS08985 53aad1e83da9a30aa6e5fedec5da9040 125 Pfam PF13417 Glutathione S-transferase, N-terminal domain 45 121 5.3E-13 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 R615_RS08985 53aad1e83da9a30aa6e5fedec5da9040 125 Gene3D G3DSA:3.40.30.10 50 122 1.1E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS08985 53aad1e83da9a30aa6e5fedec5da9040 125 SUPERFAMILY SSF52833 42 123 6.42E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS00080 1e4ef6b0610288b24c3373581a778e53 121 SUPERFAMILY SSF51316 1 112 2.2E-28 T 22-04-2016 IPR011057 Mss4-like R615_RS00080 1e4ef6b0610288b24c3373581a778e53 121 PANTHER PTHR28620 3 116 3.7E-32 T 22-04-2016 R615_RS00080 1e4ef6b0610288b24c3373581a778e53 121 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 102 4.0E-10 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 R615_RS00080 1e4ef6b0610288b24c3373581a778e53 121 Gene3D G3DSA:3.90.1590.10 1 100 4.2E-20 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 R615_RS06095 b36f9c88c2ee472ee2aeb2fb9213b813 370 Pfam PF00155 Aminotransferase class I and II 38 365 3.2E-58 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 R615_RS06095 b36f9c88c2ee472ee2aeb2fb9213b813 370 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 366 4.0E-113 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 R615_RS06095 b36f9c88c2ee472ee2aeb2fb9213b813 370 PANTHER PTHR11751:SF347 24 368 5.8E-101 T 22-04-2016 R615_RS06095 b36f9c88c2ee472ee2aeb2fb9213b813 370 SUPERFAMILY SSF53383 18 369 2.82E-86 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase R615_RS06095 b36f9c88c2ee472ee2aeb2fb9213b813 370 Gene3D G3DSA:3.40.640.10 51 269 1.2E-70 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 R615_RS06095 b36f9c88c2ee472ee2aeb2fb9213b813 370 Gene3D G3DSA:3.90.1150.10 270 369 4.5E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 R615_RS06095 b36f9c88c2ee472ee2aeb2fb9213b813 370 PANTHER PTHR11751 24 368 5.8E-101 T 22-04-2016 R615_RS06095 b36f9c88c2ee472ee2aeb2fb9213b813 370 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 227 236 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 R615_RS06095 b36f9c88c2ee472ee2aeb2fb9213b813 370 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 369 62.293 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 PANTHER PTHR22912:SF180 2 187 4.5E-22 T 22-04-2016 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 PANTHER PTHR22912:SF180 203 310 4.5E-22 T 22-04-2016 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.3E-7 T 22-04-2016 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 1.3E-7 T 22-04-2016 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 1.3E-7 T 22-04-2016 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 Gene3D G3DSA:3.50.50.60 119 271 1.8E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 SUPERFAMILY SSF51905 2 331 2.33E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 1.0E-16 T 22-04-2016 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.0E-16 T 22-04-2016 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.0E-16 T 22-04-2016 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 1.0E-16 T 22-04-2016 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 Gene3D G3DSA:3.50.50.60 1 118 5.2E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 Gene3D G3DSA:3.50.50.60 272 345 5.2E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 PANTHER PTHR22912 2 187 4.5E-22 T 22-04-2016 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 PANTHER PTHR22912 203 310 4.5E-22 T 22-04-2016 R615_RS14370 45f1f9d6254efddc02ff1a319de1b5e2 427 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 331 3.4E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 R615_RS05990 555fa035cb10cadc69e78de362b1ddc4 191 Gene3D G3DSA:2.40.100.10 15 186 2.6E-50 T 22-04-2016 IPR029000 Cyclophilin-like domain R615_RS05990 555fa035cb10cadc69e78de362b1ddc4 191 SUPERFAMILY SSF50891 28 183 1.33E-52 T 22-04-2016 IPR029000 Cyclophilin-like domain R615_RS05990 555fa035cb10cadc69e78de362b1ddc4 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 68 80 4.7E-9 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 R615_RS05990 555fa035cb10cadc69e78de362b1ddc4 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 157 4.7E-9 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 R615_RS05990 555fa035cb10cadc69e78de362b1ddc4 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 4.7E-9 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 R615_RS05990 555fa035cb10cadc69e78de362b1ddc4 191 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 63 80 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 R615_RS05990 555fa035cb10cadc69e78de362b1ddc4 191 PANTHER PTHR11071:SF265 31 184 2.3E-68 T 22-04-2016 R615_RS05990 555fa035cb10cadc69e78de362b1ddc4 191 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 29 180 7.4E-46 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 R615_RS05990 555fa035cb10cadc69e78de362b1ddc4 191 PANTHER PTHR11071 31 184 2.3E-68 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 R615_RS10420 bc9ec00e13bdf056e8a96f93cc52f41d 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 63 2.0E-17 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS10420 bc9ec00e13bdf056e8a96f93cc52f41d 178 PANTHER PTHR30055 4 69 7.4E-18 T 22-04-2016 R615_RS10420 bc9ec00e13bdf056e8a96f93cc52f41d 178 PANTHER PTHR30055:SF27 4 69 7.4E-18 T 22-04-2016 R615_RS10420 bc9ec00e13bdf056e8a96f93cc52f41d 178 SUPERFAMILY SSF46689 4 79 5.34E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS10420 bc9ec00e13bdf056e8a96f93cc52f41d 178 Gene3D G3DSA:1.10.357.10 6 165 8.1E-22 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS10420 bc9ec00e13bdf056e8a96f93cc52f41d 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.9E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS10420 bc9ec00e13bdf056e8a96f93cc52f41d 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.9E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS09645 dea76fa0218830b94f5d108b0b5cba44 323 SUPERFAMILY SSF63825 4 210 1.2E-9 T 22-04-2016 R615_RS09645 dea76fa0218830b94f5d108b0b5cba44 323 Gene3D G3DSA:2.120.10.30 35 210 1.6E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like R615_RS00510 7b6979f17d7c1cf29d92567847b4aadf 122 PANTHER PTHR35006 1 122 3.9E-45 T 22-04-2016 R615_RS00510 7b6979f17d7c1cf29d92567847b4aadf 122 Gene3D G3DSA:3.10.180.10 2 119 2.6E-32 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase R615_RS00510 7b6979f17d7c1cf29d92567847b4aadf 122 SUPERFAMILY SSF54593 3 121 8.39E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase R615_RS00510 7b6979f17d7c1cf29d92567847b4aadf 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 115 1.0E-7 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain R615_RS09740 bd919ffd8a1ff18a89b346a4701b910e 119 Pfam PF01527 Transposase 11 94 5.3E-15 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 R615_RS09740 bd919ffd8a1ff18a89b346a4701b910e 119 SUPERFAMILY SSF46689 10 107 5.38E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS09740 bd919ffd8a1ff18a89b346a4701b910e 119 PANTHER PTHR33215 8 113 4.7E-16 T 22-04-2016 R615_RS09740 bd919ffd8a1ff18a89b346a4701b910e 119 Gene3D G3DSA:1.10.10.60 14 101 1.0E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS01720 f39a9803fa1b00ff32a428101561845c 538 Pfam PF07581 The GLUG motif 198 223 9.0E-4 T 22-04-2016 IPR011493 GLUG R615_RS13235 2369649953377d1408b9841d243637b3 296 Gene3D G3DSA:3.30.1150.10 211 289 2.7E-7 T 22-04-2016 R615_RS13235 2369649953377d1408b9841d243637b3 296 SUPERFAMILY SSF74653 210 292 1.57E-7 T 22-04-2016 R615_RS05660 2f294cdf3f2468b073f141f071bd7b5d 300 SUPERFAMILY SSF53850 40 275 5.31E-8 T 22-04-2016 R615_RS05660 2f294cdf3f2468b073f141f071bd7b5d 300 TIGRFAM TIGR02285 TIGR02285: conserved hypothetical protein 31 277 5.6E-45 T 22-04-2016 IPR011972 Conserved hypothetical protein CHP02285 R615_RS00330 b61fe928f98dec2e4bf66fc3689ea7e2 389 Pfam PF05816 Toxic anion resistance protein (TelA) 45 349 5.2E-38 T 22-04-2016 IPR008863 Toxic anion resistance R615_RS00330 b61fe928f98dec2e4bf66fc3689ea7e2 389 PANTHER PTHR38432 26 364 3.3E-22 T 22-04-2016 R615_RS00330 b61fe928f98dec2e4bf66fc3689ea7e2 389 PANTHER PTHR38432:SF1 26 364 3.3E-22 T 22-04-2016 R615_RS14070 3790812475c65b2fb9ea00ba5783c818 293 SMART SM00228 213 280 0.0068 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS14070 3790812475c65b2fb9ea00ba5783c818 293 SUPERFAMILY SSF50156 210 285 9.2E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS14070 3790812475c65b2fb9ea00ba5783c818 293 Gene3D G3DSA:2.30.42.10 227 286 7.8E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 R615_RS14070 3790812475c65b2fb9ea00ba5783c818 293 Pfam PF11356 Type II secretion system protein C 21 153 1.3E-29 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal R615_RS11765 9d78ef6d1ff4c3a25093fb13010d9df1 370 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 280 326 1.4E-13 T 22-04-2016 IPR001434 Domain of unknown function DUF11 R615_RS11765 9d78ef6d1ff4c3a25093fb13010d9df1 370 Pfam PF01345 Domain of unknown function DUF11 279 322 2.0E-9 T 22-04-2016 IPR001434 Domain of unknown function DUF11 R615_RS01585 a599cb023903793377d9f1682b443e73 139 Pfam PF12568 Acetyltransferase (GNAT) domain 2 132 5.6E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 R615_RS01585 a599cb023903793377d9f1682b443e73 139 SUPERFAMILY SSF55729 9 133 4.43E-10 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS01585 a599cb023903793377d9f1682b443e73 139 Gene3D G3DSA:3.40.630.30 19 131 6.7E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS10075 84124bafb78b40bbf7049b2ad46703ef 83 Gene3D G3DSA:1.10.260.40 6 66 2.4E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 PANTHER PTHR24423 201 217 1.1E-60 T 22-04-2016 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 PANTHER PTHR24423 305 488 1.1E-60 T 22-04-2016 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 PANTHER PTHR24423 234 266 1.1E-60 T 22-04-2016 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 SMART SM00387 381 490 4.6E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 SUPERFAMILY SSF47384 232 285 8.83E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 PANTHER PTHR24423:SF360 201 217 1.1E-60 T 22-04-2016 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 PANTHER PTHR24423:SF360 305 488 1.1E-60 T 22-04-2016 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 PANTHER PTHR24423:SF360 234 266 1.1E-60 T 22-04-2016 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 339 1.0E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 Gene3D G3DSA:3.30.565.10 344 488 3.2E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 488 2.9E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 6.6E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 6.6E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 6.6E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 487 6.6E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 Gene3D G3DSA:1.10.287.130 233 285 8.0E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 R615_RS14825 85e280fe076cab738cfc5fbfdb422dbe 499 SUPERFAMILY SSF55874 332 488 1.44E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain R615_RS02005 1dbdcb34470fa58f1668323383cf3f2f 484 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 474 3.9E-183 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS02005 1dbdcb34470fa58f1668323383cf3f2f 484 Gene3D G3DSA:3.90.1300.10 2 480 1.2E-177 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS02005 1dbdcb34470fa58f1668323383cf3f2f 484 SUPERFAMILY SSF75304 2 479 2.49E-164 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS02005 1dbdcb34470fa58f1668323383cf3f2f 484 PANTHER PTHR11895:SF7 1 480 1.2E-220 T 22-04-2016 R615_RS02005 1dbdcb34470fa58f1668323383cf3f2f 484 PANTHER PTHR11895 1 480 1.2E-220 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS02005 1dbdcb34470fa58f1668323383cf3f2f 484 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 474 90.832 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS02005 1dbdcb34470fa58f1668323383cf3f2f 484 ProSitePatterns PS00571 Amidases signature. 149 180 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS02005 1dbdcb34470fa58f1668323383cf3f2f 484 Pfam PF01425 Amidase 22 463 2.9E-156 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 R615_RS16655 af2889e807a4469b6c551202af623972 339 PANTHER PTHR21716 13 337 9.0E-109 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like R615_RS16655 af2889e807a4469b6c551202af623972 339 PANTHER PTHR21716:SF17 13 337 9.0E-109 T 22-04-2016 R615_RS16655 af2889e807a4469b6c551202af623972 339 Pfam PF01594 Domain of unknown function DUF20 13 325 7.8E-55 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like R615_RS00905 f23d464a05886bc2b84dbf2e0ffa643f 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 1.5E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 R615_RS00905 f23d464a05886bc2b84dbf2e0ffa643f 204 SUPERFAMILY SSF48498 84 175 7.42E-6 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal R615_RS00905 f23d464a05886bc2b84dbf2e0ffa643f 204 PANTHER PTHR30055:SF58 1 193 7.2E-76 T 22-04-2016 R615_RS00905 f23d464a05886bc2b84dbf2e0ffa643f 204 SUPERFAMILY SSF46689 8 78 8.98E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS00905 f23d464a05886bc2b84dbf2e0ffa643f 204 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 36.118 T 22-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 R615_RS00905 f23d464a05886bc2b84dbf2e0ffa643f 204 Gene3D G3DSA:1.10.357.10 9 195 9.5E-37 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 R615_RS00905 f23d464a05886bc2b84dbf2e0ffa643f 204 PANTHER PTHR30055 1 193 7.2E-76 T 22-04-2016 R615_RS17625 c8c12d87b211117b73444a68753d4262 228 PANTHER PTHR38104 1 222 3.8E-19 T 22-04-2016 R615_RS17625 c8c12d87b211117b73444a68753d4262 228 SUPERFAMILY SSF89069 5 70 2.09E-13 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 R615_RS17625 c8c12d87b211117b73444a68753d4262 228 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 6 99 4.8E-22 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 R615_RS00155 ff2d8f49f77146635376dedf08b60bd1 443 SUPERFAMILY SSF56954 21 441 1.03E-85 T 22-04-2016 R615_RS00155 ff2d8f49f77146635376dedf08b60bd1 443 Gene3D G3DSA:1.20.1600.10 16 433 3.3E-76 T 22-04-2016 R615_RS00155 ff2d8f49f77146635376dedf08b60bd1 443 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 19 442 2.2E-96 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 R615_RS00155 ff2d8f49f77146635376dedf08b60bd1 443 Pfam PF02321 Outer membrane efflux protein 240 427 1.8E-37 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS00155 ff2d8f49f77146635376dedf08b60bd1 443 Pfam PF02321 Outer membrane efflux protein 22 216 4.1E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS01655 ff4c70073f8b160a2afabb7e127d55a2 177 PANTHER PTHR37625 1 160 8.1E-14 T 22-04-2016 R615_RS01655 ff4c70073f8b160a2afabb7e127d55a2 177 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 11 152 3.4E-28 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN R615_RS01655 ff4c70073f8b160a2afabb7e127d55a2 177 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 150 1.9E-28 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN R615_RS06510 c11eadc7d5b0e199b8359a34075939f8 512 SUPERFAMILY SSF49785 71 157 1.98E-5 T 22-04-2016 IPR008979 Galactose-binding domain-like R615_RS06510 c11eadc7d5b0e199b8359a34075939f8 512 Gene3D G3DSA:2.60.120.260 75 155 2.8E-5 T 22-04-2016 IPR008979 Galactose-binding domain-like R615_RS15695 5fe5eb55865957b6283fc790b424e089 118 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 35 111 7.3E-24 T 22-04-2016 IPR011846 Cyd operon protein YbgE R615_RS08945 b7c3d3f0cc6d701be56e657e314f33f0 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 107 3.7E-36 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 R615_RS08945 b7c3d3f0cc6d701be56e657e314f33f0 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 24.032 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 R615_RS08945 b7c3d3f0cc6d701be56e657e314f33f0 108 PANTHER PTHR36116:SF1 1 107 3.6E-40 T 22-04-2016 R615_RS08945 b7c3d3f0cc6d701be56e657e314f33f0 108 PANTHER PTHR36116 1 107 3.6E-40 T 22-04-2016 R615_RS07485 8452ec366bd4cc026f2abbd38667d2f0 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 16 187 1.1E-23 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 R615_RS07485 8452ec366bd4cc026f2abbd38667d2f0 192 SUPERFAMILY SSF101327 15 171 2.75E-11 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 R615_RS07485 8452ec366bd4cc026f2abbd38667d2f0 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 184 8.5E-25 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 R615_RS05925 6e34c2043b14b170dc6ba290bcb7de69 655 Pfam PF05960 Bacterial protein of unknown function (DUF885) 63 602 5.3E-88 T 22-04-2016 IPR010281 Protein of unknown function DUF885 R615_RS05925 6e34c2043b14b170dc6ba290bcb7de69 655 PANTHER PTHR33361 1 605 1.4E-34 T 22-04-2016 R615_RS13680 6dbc128828aea682dd64eb551f0cefcf 295 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 233 248 9.2E-24 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- R615_RS13680 6dbc128828aea682dd64eb551f0cefcf 295 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 221 232 9.2E-24 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- R615_RS13680 6dbc128828aea682dd64eb551f0cefcf 295 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 220 9.2E-24 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- R615_RS13680 6dbc128828aea682dd64eb551f0cefcf 295 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 153 170 9.2E-24 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- R615_RS13680 6dbc128828aea682dd64eb551f0cefcf 295 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 24 134 4.7E-32 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- R615_RS13680 6dbc128828aea682dd64eb551f0cefcf 295 Pfam PF01478 Type IV leader peptidase family 144 253 3.3E-26 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 R615_RS13680 6dbc128828aea682dd64eb551f0cefcf 295 PANTHER PTHR30487 67 293 2.4E-96 T 22-04-2016 R615_RS13680 6dbc128828aea682dd64eb551f0cefcf 295 PANTHER PTHR30487 1 41 2.4E-96 T 22-04-2016 R615_RS13680 6dbc128828aea682dd64eb551f0cefcf 295 PANTHER PTHR30487:SF0 67 293 2.4E-96 T 22-04-2016 R615_RS13680 6dbc128828aea682dd64eb551f0cefcf 295 PANTHER PTHR30487:SF0 1 41 2.4E-96 T 22-04-2016 R615_RS17075 71f98cccdc34c2d88bcee49eb8f63fbf 460 Pfam PF07804 HipA-like C-terminal domain 278 397 1.8E-15 T 22-04-2016 IPR012893 HipA-like, C-terminal R615_RS17075 71f98cccdc34c2d88bcee49eb8f63fbf 460 PIRSF PIRSF028135 1 459 1.7E-111 T 22-04-2016 IPR016869 Uncharacterised conserved protein UCP028135, HipA-like R615_RS17075 71f98cccdc34c2d88bcee49eb8f63fbf 460 Pfam PF07805 HipA-like N-terminal domain 159 269 1.8E-9 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 R615_RS09285 9e3ffd20fd7ac1daf95d995e4b0dac9e 559 PANTHER PTHR24096 9 155 7.0E-172 T 22-04-2016 R615_RS09285 9e3ffd20fd7ac1daf95d995e4b0dac9e 559 PANTHER PTHR24096 177 553 7.0E-172 T 22-04-2016 R615_RS09285 9e3ffd20fd7ac1daf95d995e4b0dac9e 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 22-04-2016 IPR020845 AMP-binding, conserved site R615_RS09285 9e3ffd20fd7ac1daf95d995e4b0dac9e 559 Gene3D G3DSA:3.40.50.980 23 138 2.9E-37 T 22-04-2016 R615_RS09285 9e3ffd20fd7ac1daf95d995e4b0dac9e 559 Gene3D G3DSA:3.40.50.980 197 220 2.9E-37 T 22-04-2016 R615_RS09285 9e3ffd20fd7ac1daf95d995e4b0dac9e 559 Gene3D G3DSA:3.30.300.30 458 556 4.0E-29 T 22-04-2016 R615_RS09285 9e3ffd20fd7ac1daf95d995e4b0dac9e 559 Gene3D G3DSA:3.40.50.980 221 380 1.8E-39 T 22-04-2016 R615_RS09285 9e3ffd20fd7ac1daf95d995e4b0dac9e 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.3E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain R615_RS09285 9e3ffd20fd7ac1daf95d995e4b0dac9e 559 Gene3D G3DSA:2.30.38.10 381 452 1.2E-32 T 22-04-2016 R615_RS09285 9e3ffd20fd7ac1daf95d995e4b0dac9e 559 SUPERFAMILY SSF56801 23 554 3.14E-151 T 22-04-2016 R615_RS09285 9e3ffd20fd7ac1daf95d995e4b0dac9e 559 Pfam PF00501 AMP-binding enzyme 34 461 5.2E-108 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 R615_RS12310 62437fc2fa130cb971499c8b9faafbfb 236 Pfam PF01730 UreF 49 194 7.3E-38 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 R615_RS12310 62437fc2fa130cb971499c8b9faafbfb 236 PANTHER PTHR33620 6 236 3.3E-33 T 22-04-2016 R615_RS12310 62437fc2fa130cb971499c8b9faafbfb 236 PIRSF PIRSF009467 14 236 5.8E-60 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 R615_RS12310 62437fc2fa130cb971499c8b9faafbfb 236 Hamap MF_01385 Urease accessory protein UreF [ureF]. 17 236 31.409 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 R615_RS09495 d8fe3a0b3f10caa992744eb0d4597e1c 180 Pfam PF04315 Elongation factor P hydroxylase 9 170 1.7E-69 T 22-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- R615_RS02795 1df121546c2b6934df80eb75fb21cdff 160 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 25 1.9E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS02795 1df121546c2b6934df80eb75fb21cdff 160 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS02795 1df121546c2b6934df80eb75fb21cdff 160 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 25 3.2E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS02235 3bb8345985d1db81c58328662a24e095 375 SUPERFAMILY SSF55073 208 368 5.89E-48 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS02235 3bb8345985d1db81c58328662a24e095 375 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 365 1.3E-46 T 22-04-2016 IPR000160 GGDEF domain R615_RS02235 3bb8345985d1db81c58328662a24e095 375 SMART SM00267 192 369 3.8E-58 T 22-04-2016 IPR000160 GGDEF domain R615_RS02235 3bb8345985d1db81c58328662a24e095 375 PANTHER PTHR10799 46 198 1.5E-29 T 22-04-2016 R615_RS02235 3bb8345985d1db81c58328662a24e095 375 PANTHER PTHR10799 240 364 1.5E-29 T 22-04-2016 R615_RS02235 3bb8345985d1db81c58328662a24e095 375 PANTHER PTHR10799:SF710 46 198 1.5E-29 T 22-04-2016 R615_RS02235 3bb8345985d1db81c58328662a24e095 375 PANTHER PTHR10799:SF710 240 364 1.5E-29 T 22-04-2016 R615_RS02235 3bb8345985d1db81c58328662a24e095 375 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 200 368 6.8E-53 T 22-04-2016 IPR000160 GGDEF domain R615_RS02235 3bb8345985d1db81c58328662a24e095 375 Gene3D G3DSA:3.30.70.270 205 369 1.2E-53 T 22-04-2016 R615_RS06420 edc47f7eb55e0148db2e8d64a559e85d 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 41 204 1.1E-20 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal R615_RS06420 edc47f7eb55e0148db2e8d64a559e85d 339 PANTHER PTHR11019 239 338 4.2E-21 T 22-04-2016 R615_RS06420 edc47f7eb55e0148db2e8d64a559e85d 339 Pfam PF12833 Helix-turn-helix domain 254 331 3.8E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS06420 edc47f7eb55e0148db2e8d64a559e85d 339 SMART SM00342 248 330 9.9E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 R615_RS06420 edc47f7eb55e0148db2e8d64a559e85d 339 Gene3D G3DSA:1.10.10.60 282 332 5.0E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS06420 edc47f7eb55e0148db2e8d64a559e85d 339 SUPERFAMILY SSF46689 283 333 1.75E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 R615_RS06420 edc47f7eb55e0148db2e8d64a559e85d 339 PANTHER PTHR11019:SF52 239 338 4.2E-21 T 22-04-2016 R615_RS06420 edc47f7eb55e0148db2e8d64a559e85d 339 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 284 326 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 R615_RS06420 edc47f7eb55e0148db2e8d64a559e85d 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 5.7E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS06420 edc47f7eb55e0148db2e8d64a559e85d 339 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 5.7E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 R615_RS16315 7bbca2f0af4daa730972377debadd85b 195 SMART SM00463 93 177 2.9E-12 T 22-04-2016 IPR002625 Smr domain R615_RS16315 7bbca2f0af4daa730972377debadd85b 195 SUPERFAMILY SSF160443 93 177 1.29E-15 T 22-04-2016 IPR002625 Smr domain R615_RS16315 7bbca2f0af4daa730972377debadd85b 195 PANTHER PTHR35562 1 187 2.5E-58 T 22-04-2016 R615_RS16315 7bbca2f0af4daa730972377debadd85b 195 Pfam PF01713 Smr domain 96 177 9.2E-20 T 22-04-2016 IPR002625 Smr domain R615_RS16315 7bbca2f0af4daa730972377debadd85b 195 PANTHER PTHR35562:SF2 1 187 2.5E-58 T 22-04-2016 R615_RS04155 9aae0410e39b96d01842f5d02bec97b9 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 19 294 4.5E-47 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 R615_RS04155 9aae0410e39b96d01842f5d02bec97b9 308 PANTHER PTHR11795 12 308 5.1E-101 T 22-04-2016 R615_RS04155 9aae0410e39b96d01842f5d02bec97b9 308 PANTHER PTHR11795:SF349 12 308 5.1E-101 T 22-04-2016 R615_RS04155 9aae0410e39b96d01842f5d02bec97b9 308 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 16 307 8.4E-121 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type R615_RS15185 d494cf56349073dc5d5049160b1a8e7f 359 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 337 2.4E-41 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 R615_RS15185 d494cf56349073dc5d5049160b1a8e7f 359 PANTHER PTHR32196:SF22 1 359 1.7E-70 T 22-04-2016 R615_RS15185 d494cf56349073dc5d5049160b1a8e7f 359 PANTHER PTHR32196 1 359 1.7E-70 T 22-04-2016 R615_RS04525 4347a8eb4ffd50e839c60af918c7dbcb 325 Pfam PF07751 Abi-like protein 33 233 4.1E-55 T 22-04-2016 IPR011664 Abortive infection system protein AbiD/AbiF-like R615_RS04525 4347a8eb4ffd50e839c60af918c7dbcb 325 PIRSF PIRSF034934 1 324 5.4E-64 T 22-04-2016 IPR017034 Abortive infection system protein AbiD/AbiF R615_RS01090 8bbd7fd37448810abc4699ac7b803e77 199 Pfam PF13689 Domain of unknown function (DUF4154) 45 188 3.5E-41 T 22-04-2016 IPR025293 Protein of unknown function DUF4154 R615_RS08510 ff2fee3705d1122338c0a89a2da4ebaf 103 Pfam PF04358 DsrC like protein 2 103 1.3E-36 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE R615_RS08510 ff2fee3705d1122338c0a89a2da4ebaf 103 SUPERFAMILY SSF69721 2 103 3.92E-33 T 22-04-2016 IPR025526 DsrC-like domain R615_RS08510 ff2fee3705d1122338c0a89a2da4ebaf 103 PANTHER PTHR37010:SF1 2 103 2.8E-36 T 22-04-2016 R615_RS08510 ff2fee3705d1122338c0a89a2da4ebaf 103 PANTHER PTHR37010 2 103 2.8E-36 T 22-04-2016 R615_RS08510 ff2fee3705d1122338c0a89a2da4ebaf 103 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 103 2.6E-39 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE R615_RS08510 ff2fee3705d1122338c0a89a2da4ebaf 103 Gene3D G3DSA:3.30.1420.10 3 33 1.7E-10 T 22-04-2016 R615_RS08510 ff2fee3705d1122338c0a89a2da4ebaf 103 Gene3D G3DSA:1.10.10.370 34 103 1.1E-26 T 22-04-2016 R615_RS08510 ff2fee3705d1122338c0a89a2da4ebaf 103 PIRSF PIRSF006223 1 103 4.5E-34 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE R615_RS15300 bc7b1acd020451bcd4fc7d6d28edec85 154 PANTHER PTHR30273 12 153 9.9E-14 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component R615_RS15300 bc7b1acd020451bcd4fc7d6d28edec85 154 Pfam PF04773 FecR protein 41 134 2.0E-14 T 22-04-2016 IPR006860 FecR protein R615_RS15300 bc7b1acd020451bcd4fc7d6d28edec85 154 PANTHER PTHR30273:SF2 12 153 9.9E-14 T 22-04-2016 R615_RS04705 3b7be180d2c0f5c88e75b44f69b54508 349 Pfam PF04230 Polysaccharide pyruvyl transferase 15 279 2.2E-17 T 22-04-2016 IPR007345 Polysaccharide pyruvyl transferase R615_RS17015 cc58cf21c181c3d6eaf0334364c75d01 198 PANTHER PTHR30485:SF0 37 197 1.3E-12 T 22-04-2016 R615_RS17015 cc58cf21c181c3d6eaf0334364c75d01 198 PANTHER PTHR30485 37 197 1.3E-12 T 22-04-2016 R615_RS17015 cc58cf21c181c3d6eaf0334364c75d01 198 SUPERFAMILY SSF81342 5 185 7.69E-34 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 R615_RS17015 cc58cf21c181c3d6eaf0334364c75d01 198 Pfam PF01292 Prokaryotic cytochrome b561 9 182 1.2E-19 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 R615_RS10580 f08a26ce6df00a29ca5aa7c13db0266e 186 PIRSF PIRSF004982 3 185 4.7E-42 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 R615_RS10580 f08a26ce6df00a29ca5aa7c13db0266e 186 PANTHER PTHR37530 1 158 5.1E-34 T 22-04-2016 R615_RS10580 f08a26ce6df00a29ca5aa7c13db0266e 186 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 4 147 1.4E-27 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 R615_RS10580 f08a26ce6df00a29ca5aa7c13db0266e 186 Pfam PF03843 Outer membrane lipoprotein Slp family 18 170 6.5E-40 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 R615_RS04530 c6606d61d3cfb754bd2cba0fa403d231 410 PANTHER PTHR40455:SF1 7 131 7.4E-17 T 22-04-2016 R615_RS04530 c6606d61d3cfb754bd2cba0fa403d231 410 PANTHER PTHR40455 7 131 7.4E-17 T 22-04-2016 R615_RS04530 c6606d61d3cfb754bd2cba0fa403d231 410 Pfam PF06114 Domain of unknown function (DUF955) 255 377 3.0E-12 T 22-04-2016 IPR010359 HTH domain, IrrE-type R615_RS04530 c6606d61d3cfb754bd2cba0fa403d231 410 Gene3D G3DSA:1.10.260.40 45 120 9.5E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS15325 91a632c8de3ba18b86fc72632a314b22 647 PANTHER PTHR32552:SF12 1 647 2.1E-154 T 22-04-2016 R615_RS15325 91a632c8de3ba18b86fc72632a314b22 647 Gene3D G3DSA:2.170.130.10 18 121 2.7E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS15325 91a632c8de3ba18b86fc72632a314b22 647 PANTHER PTHR32552 1 647 2.1E-154 T 22-04-2016 R615_RS15325 91a632c8de3ba18b86fc72632a314b22 647 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 19 645 1.3E-214 T 22-04-2016 IPR010100 TonB-dependent copper receptor R615_RS15325 91a632c8de3ba18b86fc72632a314b22 647 Gene3D G3DSA:2.40.170.20 122 646 2.0E-63 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS15325 91a632c8de3ba18b86fc72632a314b22 647 SUPERFAMILY SSF56935 2 646 5.95E-83 T 22-04-2016 R615_RS15325 91a632c8de3ba18b86fc72632a314b22 647 Pfam PF07715 TonB-dependent Receptor Plug Domain 13 118 4.1E-13 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 R615_RS15325 91a632c8de3ba18b86fc72632a314b22 647 Pfam PF00593 TonB dependent receptor 392 646 7.9E-24 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 R615_RS11870 6b5505ef0bbc56d8ba89bbbc622e2df6 159 Pfam PF14539 Domain of unknown function (DUF4442) 13 152 2.1E-21 T 22-04-2016 IPR027961 Protein of unknown function DUF4442 R615_RS11870 6b5505ef0bbc56d8ba89bbbc622e2df6 159 Gene3D G3DSA:3.10.129.10 11 157 1.5E-38 T 22-04-2016 IPR029069 HotDog domain R615_RS11870 6b5505ef0bbc56d8ba89bbbc622e2df6 159 SUPERFAMILY SSF54637 23 156 8.96E-22 T 22-04-2016 IPR029069 HotDog domain R615_RS10925 7dbf2a99a3f859eaa860f86b64905795 155 Pfam PF11220 Protein of unknown function (DUF3015) 18 153 3.1E-35 T 22-04-2016 IPR021383 Protein of unknown function DUF3015 R615_RS13695 e80f71f9b9efed4844a786b42790bc7b 393 SUPERFAMILY SSF52172 18 132 1.76E-7 T 22-04-2016 IPR011006 CheY-like superfamily R615_RS13695 e80f71f9b9efed4844a786b42790bc7b 393 Gene3D G3DSA:3.40.50.2300 12 128 3.4E-9 T 22-04-2016 R615_RS05825 12fdfe0b79e722342506dc220dac2530 459 Pfam PF11067 Protein of unknown function (DUF2868) 147 441 1.2E-66 T 22-04-2016 IPR021296 Protein of unknown function DUF2868 R615_RS09690 a2f2c6aeb88e9f077721cc6518c1fe06 323 PANTHER PTHR23406:SF1 1 293 5.1E-13 T 22-04-2016 R615_RS09690 a2f2c6aeb88e9f077721cc6518c1fe06 323 PIRSF PIRSF000428 10 318 1.8E-81 T 22-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 R615_RS09690 a2f2c6aeb88e9f077721cc6518c1fe06 323 PANTHER PTHR23406 1 293 5.1E-13 T 22-04-2016 R615_RS09690 a2f2c6aeb88e9f077721cc6518c1fe06 323 Gene3D G3DSA:3.40.50.10750 134 289 4.6E-49 T 22-04-2016 R615_RS09690 a2f2c6aeb88e9f077721cc6518c1fe06 323 Pfam PF01515 Phosphate acetyl/butaryl transferase 99 310 1.3E-45 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 R615_RS09690 a2f2c6aeb88e9f077721cc6518c1fe06 323 SUPERFAMILY SSF53659 23 316 5.76E-61 T 22-04-2016 R615_RS00380 469cdec7b06602652c08ea90242ed94a 618 SUPERFAMILY SSF53474 508 538 9.01E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS00380 469cdec7b06602652c08ea90242ed94a 618 SUPERFAMILY SSF53474 289 353 9.01E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS00380 469cdec7b06602652c08ea90242ed94a 618 SUPERFAMILY SSF53474 380 455 9.01E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS00380 469cdec7b06602652c08ea90242ed94a 618 Gene3D G3DSA:3.40.50.1820 291 538 8.2E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS15445 a5c9543fceecc68a4e53f1f5a4bd6903 367 Pfam PF13795 HupE / UreJ protein 179 338 1.1E-40 T 22-04-2016 IPR032809 Putative HupE/UreJ protein R615_RS15445 a5c9543fceecc68a4e53f1f5a4bd6903 367 ProSitePatterns PS00018 EF-hand calcium-binding domain. 55 67 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site R615_RS05295 76a02d7d0870b55906389b9ca340860a 152 SUPERFAMILY SSF46458 1 134 4.04E-38 T 22-04-2016 IPR009050 Globin-like R615_RS05295 76a02d7d0870b55906389b9ca340860a 152 Gene3D G3DSA:1.10.490.10 4 140 3.0E-40 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 R615_RS05295 76a02d7d0870b55906389b9ca340860a 152 PANTHER PTHR22924 1 134 6.2E-30 T 22-04-2016 R615_RS05295 76a02d7d0870b55906389b9ca340860a 152 Pfam PF00042 Globin 7 101 4.0E-12 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 R615_RS11390 6f00fbc534002f26698c12534aedb72f 141 Pfam PF16133 Domain of unknown function (DUF4844) 27 137 4.5E-31 T 22-04-2016 IPR032301 Protein of unknown function DUF4844 R615_RS00495 803c0854b7cdcddb0d271715bed1c455 88 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 5 57 9.0E-19 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 R615_RS00495 803c0854b7cdcddb0d271715bed1c455 88 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 68 7.5E-24 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 R615_RS11890 7015d84e5dd53419df6bae7380595172 135 Pfam PF07238 PilZ domain 49 114 1.5E-4 T 22-04-2016 IPR009875 PilZ domain GO:0035438 R615_RS13295 86c0776d5ad2c3d0c2f4016a066483c9 166 Gene3D G3DSA:3.30.450.20 72 159 1.6E-6 T 22-04-2016 R615_RS13295 86c0776d5ad2c3d0c2f4016a066483c9 166 SUPERFAMILY SSF103190 34 166 2.35E-5 T 22-04-2016 IPR029151 Periplasmic sensor domain-like R615_RS16025 6de886a13a256311f12eec8ce229c9ae 330 SUPERFAMILY SSF53613 2 318 3.12E-79 T 22-04-2016 IPR029056 Ribokinase-like R615_RS16025 6de886a13a256311f12eec8ce229c9ae 330 Gene3D G3DSA:3.40.1190.20 3 324 7.7E-69 T 22-04-2016 IPR029056 Ribokinase-like R615_RS16025 6de886a13a256311f12eec8ce229c9ae 330 PANTHER PTHR10584:SF153 3 329 2.5E-97 T 22-04-2016 R615_RS16025 6de886a13a256311f12eec8ce229c9ae 330 Pfam PF00294 pfkB family carbohydrate kinase 59 319 3.9E-59 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB R615_RS16025 6de886a13a256311f12eec8ce229c9ae 330 PANTHER PTHR10584 3 329 2.5E-97 T 22-04-2016 R615_RS16025 6de886a13a256311f12eec8ce229c9ae 330 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 273 286 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 R615_RS16235 61e318652671b7405b767acd7e790cef 287 SUPERFAMILY SSF52151 1 234 1.02E-36 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 R615_RS16235 61e318652671b7405b767acd7e790cef 287 PANTHER PTHR14226:SF25 5 283 1.2E-51 T 22-04-2016 R615_RS16235 61e318652671b7405b767acd7e790cef 287 Pfam PF01734 Patatin-like phospholipase 8 172 1.0E-17 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 R615_RS16235 61e318652671b7405b767acd7e790cef 287 PANTHER PTHR14226 5 283 1.2E-51 T 22-04-2016 R615_RS00550 2d8f5a763068b551b6eeb0aef1f364cd 479 Pfam PF02666 Phosphatidylserine decarboxylase 227 466 1.3E-20 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 R615_RS15450 13e39185e369a0badf661d1dda252da2 362 Gene3D G3DSA:1.25.40.10 95 157 4.8E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS15450 13e39185e369a0badf661d1dda252da2 362 Gene3D G3DSA:1.25.40.10 194 227 4.8E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS15450 13e39185e369a0badf661d1dda252da2 362 SUPERFAMILY SSF48452 194 227 1.04E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS15450 13e39185e369a0badf661d1dda252da2 362 SUPERFAMILY SSF48452 93 157 1.04E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS07540 02d26a2a4f468dd8bfca98ed4431a67a 70 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 2 49 8.7E-16 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type R615_RS07540 02d26a2a4f468dd8bfca98ed4431a67a 70 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 5.6E-22 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type R615_RS07540 02d26a2a4f468dd8bfca98ed4431a67a 70 PANTHER PTHR41532 2 69 7.7E-18 T 22-04-2016 R615_RS13330 1161f48f4504cc1728fb0f8771e99424 184 Gene3D G3DSA:1.10.720.30 17 74 1.3E-28 T 22-04-2016 IPR003034 SAP domain R615_RS13330 1161f48f4504cc1728fb0f8771e99424 184 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 8 70 2.7E-31 T 22-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 R615_RS15030 8aa5f96e3e0cc0c912ae8dcfdba68896 217 Pfam PF01794 Ferric reductase like transmembrane component 61 174 7.3E-15 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain R615_RS15030 8aa5f96e3e0cc0c912ae8dcfdba68896 217 PANTHER PTHR36964 12 203 2.4E-37 T 22-04-2016 R615_RS14850 08460bed82ba3f4c92aecbdd80f54993 328 PANTHER PTHR30329:SF4 5 72 4.6E-68 T 22-04-2016 R615_RS14850 08460bed82ba3f4c92aecbdd80f54993 328 PANTHER PTHR30329:SF4 88 311 4.6E-68 T 22-04-2016 R615_RS14850 08460bed82ba3f4c92aecbdd80f54993 328 Pfam PF00691 OmpA family 183 282 1.5E-11 T 22-04-2016 IPR006665 OmpA-like domain R615_RS14850 08460bed82ba3f4c92aecbdd80f54993 328 PANTHER PTHR30329 5 72 4.6E-68 T 22-04-2016 R615_RS14850 08460bed82ba3f4c92aecbdd80f54993 328 PANTHER PTHR30329 88 311 4.6E-68 T 22-04-2016 R615_RS14850 08460bed82ba3f4c92aecbdd80f54993 328 SUPERFAMILY SSF103088 159 288 1.31E-25 T 22-04-2016 IPR006665 OmpA-like domain R615_RS14850 08460bed82ba3f4c92aecbdd80f54993 328 Gene3D G3DSA:3.30.1330.60 160 288 7.1E-28 T 22-04-2016 IPR006665 OmpA-like domain R615_RS14850 08460bed82ba3f4c92aecbdd80f54993 328 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 7 59 8.0E-18 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain R615_RS11675 a753b865397f0c9cc9764a6c6af20ef1 591 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 489 509 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 R615_RS11675 a753b865397f0c9cc9764a6c6af20ef1 591 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 582 1.9E-255 T 22-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily R615_RS11675 a753b865397f0c9cc9764a6c6af20ef1 591 PANTHER PTHR11819 4 306 5.6E-202 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 R615_RS11675 a753b865397f0c9cc9764a6c6af20ef1 591 PANTHER PTHR11819 355 591 5.6E-202 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 R615_RS11675 a753b865397f0c9cc9764a6c6af20ef1 591 Pfam PF00474 Sodium:solute symporter family 392 507 4.5E-14 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 R615_RS11675 a753b865397f0c9cc9764a6c6af20ef1 591 Pfam PF00474 Sodium:solute symporter family 33 297 1.2E-35 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 R615_RS11675 a753b865397f0c9cc9764a6c6af20ef1 591 PANTHER PTHR11819:SF159 4 306 5.6E-202 T 22-04-2016 R615_RS11675 a753b865397f0c9cc9764a6c6af20ef1 591 PANTHER PTHR11819:SF159 355 591 5.6E-202 T 22-04-2016 R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 PANTHER PTHR24322 7 134 5.4E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 PANTHER PTHR24322 150 182 5.4E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 SUPERFAMILY SSF51735 3 253 9.93E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.7E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.7E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.7E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.7E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 Pfam PF00106 short chain dehydrogenase 3 193 1.7E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.2E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.2E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.2E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR R615_RS12005 c5a8b9f7c4173780d7726645db39ddc0 256 Gene3D G3DSA:3.40.50.720 3 252 2.5E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS09925 556f09a3067b91bd5e4d00eeafd436f5 163 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 10 49 9.3E-7 T 22-04-2016 IPR019587 Polyketide cyclase/dehydrase R615_RS09925 556f09a3067b91bd5e4d00eeafd436f5 163 SUPERFAMILY SSF55961 11 158 1.79E-11 T 22-04-2016 R615_RS09925 556f09a3067b91bd5e4d00eeafd436f5 163 Gene3D G3DSA:3.30.530.20 9 64 4.6E-7 T 22-04-2016 IPR023393 START-like domain R615_RS04255 ba16c5f666ad0aba6172125ef2454a2f 125 Pfam PF04126 Cyclophilin-like 4 121 7.3E-26 T 22-04-2016 IPR025658 Cyclophilin TM1367-like domain R615_RS04255 ba16c5f666ad0aba6172125ef2454a2f 125 SUPERFAMILY SSF50891 4 124 1.21E-20 T 22-04-2016 IPR029000 Cyclophilin-like domain R615_RS09295 f313569d271554c26c19dbf829b97f6f 319 Pfam PF16031 TonB N-terminal region 62 169 1.3E-7 T 22-04-2016 R615_RS07350 471eb3e9c8114226a53d9fee442ee2dd 124 Pfam PF13560 Helix-turn-helix domain 14 71 3.4E-14 T 22-04-2016 R615_RS07350 471eb3e9c8114226a53d9fee442ee2dd 124 SMART SM00530 18 73 4.9E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 R615_RS07350 471eb3e9c8114226a53d9fee442ee2dd 124 SUPERFAMILY SSF47413 10 68 4.79E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS07350 471eb3e9c8114226a53d9fee442ee2dd 124 Gene3D G3DSA:1.10.260.40 13 68 1.5E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS06015 36b0b6fe6a7ef8d5342bf4f603e45c55 274 PANTHER PTHR30007:SF4 1 273 2.2E-71 T 22-04-2016 R615_RS06015 36b0b6fe6a7ef8d5342bf4f603e45c55 274 Pfam PF02811 PHP domain 2 99 9.4E-10 T 22-04-2016 IPR004013 PHP domain GO:0003824 R615_RS06015 36b0b6fe6a7ef8d5342bf4f603e45c55 274 SMART SM00481 1 66 5.8E-18 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 R615_RS06015 36b0b6fe6a7ef8d5342bf4f603e45c55 274 Gene3D G3DSA:3.20.20.140 154 264 7.9E-41 T 22-04-2016 R615_RS06015 36b0b6fe6a7ef8d5342bf4f603e45c55 274 Gene3D G3DSA:3.20.20.140 1 84 7.9E-41 T 22-04-2016 R615_RS06015 36b0b6fe6a7ef8d5342bf4f603e45c55 274 PANTHER PTHR30007 1 273 2.2E-71 T 22-04-2016 R615_RS06015 36b0b6fe6a7ef8d5342bf4f603e45c55 274 SUPERFAMILY SSF89550 162 273 1.18E-47 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 R615_RS06015 36b0b6fe6a7ef8d5342bf4f603e45c55 274 SUPERFAMILY SSF89550 1 79 1.18E-47 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 R615_RS03615 737f3d7f81f0f388d67bbadf52d087b9 276 Pfam PF08808 RES domain 167 261 3.3E-6 T 22-04-2016 IPR014914 RES domain R615_RS08225 8ac7c9a9c4ebccf85cd5f4afe867cdd1 503 PANTHER PTHR10283:SF93 12 168 2.2E-229 T 22-04-2016 R615_RS08225 8ac7c9a9c4ebccf85cd5f4afe867cdd1 503 PANTHER PTHR10283:SF93 198 503 2.2E-229 T 22-04-2016 R615_RS08225 8ac7c9a9c4ebccf85cd5f4afe867cdd1 503 PANTHER PTHR10283 12 168 2.2E-229 T 22-04-2016 R615_RS08225 8ac7c9a9c4ebccf85cd5f4afe867cdd1 503 PANTHER PTHR10283 198 503 2.2E-229 T 22-04-2016 R615_RS08225 8ac7c9a9c4ebccf85cd5f4afe867cdd1 503 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 501 1.9E-230 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 R615_RS08225 8ac7c9a9c4ebccf85cd5f4afe867cdd1 503 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 503 312.799 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 R615_RS12945 1f12b5b3df8d27afd0ad56e1a4e8cb35 248 SUPERFAMILY SSF69572 2 246 1.44E-81 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 R615_RS12945 1f12b5b3df8d27afd0ad56e1a4e8cb35 248 Pfam PF00899 ThiF family 9 242 3.6E-62 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 R615_RS12945 1f12b5b3df8d27afd0ad56e1a4e8cb35 248 PANTHER PTHR10953 1 239 2.3E-80 T 22-04-2016 R615_RS12945 1f12b5b3df8d27afd0ad56e1a4e8cb35 248 Gene3D G3DSA:3.40.50.720 3 246 6.0E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS12945 1f12b5b3df8d27afd0ad56e1a4e8cb35 248 PANTHER PTHR10953:SF158 1 239 2.3E-80 T 22-04-2016 R615_RS13945 2b873f4246134e5b17aa8c7a86b10915 637 Pfam PF06980 Protein of unknown function (DUF1302) 30 637 3.8E-190 T 22-04-2016 IPR010727 Protein of unknown function DUF1302 R615_RS07225 aa76a9486323bfb13739e59a8dbc89b2 147 PANTHER PTHR38009:SF1 3 147 2.2E-20 T 22-04-2016 R615_RS07225 aa76a9486323bfb13739e59a8dbc89b2 147 Pfam PF06841 T4-like virus tail tube protein gp19 9 143 3.0E-41 T 22-04-2016 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 R615_RS07225 aa76a9486323bfb13739e59a8dbc89b2 147 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 5 144 6.8E-38 T 22-04-2016 IPR011747 Conserved hypothetical protein CHP02241 R615_RS07225 aa76a9486323bfb13739e59a8dbc89b2 147 PANTHER PTHR38009 3 147 2.2E-20 T 22-04-2016 R615_RS13665 d63a719ac968951f806fa9ae98e1affe 549 Pfam PF00884 Sulfatase 82 405 2.4E-20 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 R615_RS13665 d63a719ac968951f806fa9ae98e1affe 549 SUPERFAMILY SSF53649 79 437 8.5E-45 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 R615_RS13665 d63a719ac968951f806fa9ae98e1affe 549 Gene3D G3DSA:3.40.720.10 82 421 1.3E-34 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 R615_RS13665 d63a719ac968951f806fa9ae98e1affe 549 PANTHER PTHR10342 43 204 2.1E-17 T 22-04-2016 R615_RS13665 d63a719ac968951f806fa9ae98e1affe 549 PANTHER PTHR10342 381 416 2.1E-17 T 22-04-2016 R615_RS13665 d63a719ac968951f806fa9ae98e1affe 549 PANTHER PTHR10342 232 341 2.1E-17 T 22-04-2016 R615_RS07690 6c123cf567a45722f7177c3b71798e59 262 Pfam PF00753 Metallo-beta-lactamase superfamily 39 176 5.6E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS07690 6c123cf567a45722f7177c3b71798e59 262 PANTHER PTHR11935:SF113 3 262 6.7E-53 T 22-04-2016 R615_RS07690 6c123cf567a45722f7177c3b71798e59 262 Gene3D G3DSA:3.60.15.10 5 261 3.6E-67 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS07690 6c123cf567a45722f7177c3b71798e59 262 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 3 262 29.068 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 R615_RS07690 6c123cf567a45722f7177c3b71798e59 262 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 177 262 2.6E-17 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 R615_RS07690 6c123cf567a45722f7177c3b71798e59 262 SUPERFAMILY SSF56281 1 261 2.98E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS07690 6c123cf567a45722f7177c3b71798e59 262 SMART SM00849 13 176 1.0E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS07690 6c123cf567a45722f7177c3b71798e59 262 PANTHER PTHR11935 3 262 6.7E-53 T 22-04-2016 R615_RS14510 7b3d9ed926950763f302ae43cc413449 94 Pfam PF06844 Protein of unknown function (DUF1244) 24 89 8.5E-37 T 22-04-2016 IPR023163 SMc04008-like domain R615_RS14510 7b3d9ed926950763f302ae43cc413449 94 Gene3D G3DSA:1.10.3340.10 2 81 6.3E-42 T 22-04-2016 IPR023163 SMc04008-like domain R615_RS14510 7b3d9ed926950763f302ae43cc413449 94 SUPERFAMILY SSF158757 2 74 5.75E-36 T 22-04-2016 IPR023163 SMc04008-like domain R615_RS06695 26f9713041f2319a88e51a6ba7e0dac3 189 Gene3D G3DSA:3.40.50.2020 2 167 1.6E-19 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS06695 26f9713041f2319a88e51a6ba7e0dac3 189 SUPERFAMILY SSF53271 4 167 2.71E-22 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS06695 26f9713041f2319a88e51a6ba7e0dac3 189 Pfam PF00156 Phosphoribosyl transferase domain 4 163 1.2E-8 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 R615_RS09015 e71d19277efd4055b55080a719bfe2a3 180 Pfam PF01618 MotA/TolQ/ExbB proton channel family 50 162 3.3E-21 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 R615_RS09015 e71d19277efd4055b55080a719bfe2a3 180 PANTHER PTHR30625 4 154 5.1E-20 T 22-04-2016 R615_RS11160 9d176afe8693b7deb5d5842786a2ec04 92 Gene3D G3DSA:1.10.150.20 1 83 1.1E-20 T 22-04-2016 R615_RS11160 9d176afe8693b7deb5d5842786a2ec04 92 PANTHER PTHR36121:SF1 4 89 6.5E-15 T 22-04-2016 R615_RS11160 9d176afe8693b7deb5d5842786a2ec04 92 Pfam PF04994 TfoX C-terminal domain 2 79 3.7E-21 T 22-04-2016 IPR007077 TfoX, C-terminal R615_RS11160 9d176afe8693b7deb5d5842786a2ec04 92 PANTHER PTHR36121 4 89 6.5E-15 T 22-04-2016 R615_RS07430 8d310648780c2590b69c490bf6cfa618 161 Pfam PF10675 Protein of unknown function (DUF2489) 16 149 4.8E-36 T 22-04-2016 IPR019617 Domain of unknown function DUF2489 R615_RS15725 7873271a83434fc6a71000f7859add88 249 Pfam PF16811 TRAP transporter T-component 3 248 6.3E-82 T 22-04-2016 IPR031823 TRAP transporter T-component R615_RS02125 0c947c81345d18060037e37dd33c331b 102 Pfam PF13466 STAS domain 16 94 9.1E-17 T 22-04-2016 IPR002645 STAS domain R615_RS02125 0c947c81345d18060037e37dd33c331b 102 SUPERFAMILY SSF52091 7 99 4.91E-15 T 22-04-2016 IPR002645 STAS domain R615_RS02125 0c947c81345d18060037e37dd33c331b 102 Gene3D G3DSA:3.30.750.24 15 98 2.6E-13 T 22-04-2016 IPR002645 STAS domain R615_RS13525 7e071bb7ed3983b4817b547a0043ad05 215 Pfam PF07290 Protein of unknown function (DUF1449) 9 207 8.0E-54 T 22-04-2016 IPR010840 Protein of unknown function DUF1449 R615_RS13445 b74fd86b9cd8642d4a206c2e5a893bc0 223 Pfam PF06912 Protein of unknown function (DUF1275) 14 209 1.3E-30 T 22-04-2016 IPR010699 Protein of unknown function DUF1275 R615_RS12370 f7d5ffd4814b7a76ccc6513978800533 220 PIRSF PIRSF006170 1 220 4.8E-58 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 R615_RS12370 f7d5ffd4814b7a76ccc6513978800533 220 Gene3D G3DSA:1.25.40.10 84 201 9.0E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS12370 f7d5ffd4814b7a76ccc6513978800533 220 Pfam PF09976 Tetratricopeptide repeat-like domain 15 215 3.6E-48 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain R615_RS12370 f7d5ffd4814b7a76ccc6513978800533 220 PANTHER PTHR38035 2 216 1.5E-45 T 22-04-2016 R615_RS12370 f7d5ffd4814b7a76ccc6513978800533 220 SUPERFAMILY SSF48452 102 201 5.38E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS08950 0ff1cce9362a85461346267da29957d8 181 Pfam PF04116 Fatty acid hydroxylase superfamily 13 146 3.6E-22 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 R615_RS08950 0ff1cce9362a85461346267da29957d8 181 PANTHER PTHR11863 2 146 6.7E-20 T 22-04-2016 R615_RS08950 0ff1cce9362a85461346267da29957d8 181 PANTHER PTHR11863:SF2 2 146 6.7E-20 T 22-04-2016 R615_RS07750 bdc69b1f637c685ddfea6c55c3ca9b62 196 Gene3D G3DSA:1.10.10.10 30 60 8.9E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS14275 7dba0a5c4a9d4944316971ab37b9f240 151 PANTHER PTHR35146 1 149 6.7E-51 T 22-04-2016 R615_RS14275 7dba0a5c4a9d4944316971ab37b9f240 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 2 148 31.397 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 R615_RS14275 7dba0a5c4a9d4944316971ab37b9f240 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 19 147 1.5E-47 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 R615_RS14275 7dba0a5c4a9d4944316971ab37b9f240 151 PANTHER PTHR35146:SF1 1 149 6.7E-51 T 22-04-2016 R615_RS02800 a096fa32c7f4c5a5a8b0c18454beb221 265 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 25 1.2E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS02800 a096fa32c7f4c5a5a8b0c18454beb221 265 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS02800 a096fa32c7f4c5a5a8b0c18454beb221 265 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 24 7.6E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site R615_RS02800 a096fa32c7f4c5a5a8b0c18454beb221 265 SUPERFAMILY SSF54523 7 96 1.8E-7 T 22-04-2016 R615_RS09990 254a929c1cc5cdbf53fe6d676e3484ea 461 SUPERFAMILY SSF53850 166 342 1.96E-20 T 22-04-2016 R615_RS09990 254a929c1cc5cdbf53fe6d676e3484ea 461 SUPERFAMILY SSF53850 40 130 1.96E-20 T 22-04-2016 R615_RS09990 254a929c1cc5cdbf53fe6d676e3484ea 461 Pfam PF13379 NMT1-like family 35 315 3.8E-107 T 22-04-2016 R615_RS09990 254a929c1cc5cdbf53fe6d676e3484ea 461 PANTHER PTHR30024 170 440 2.3E-135 T 22-04-2016 R615_RS09990 254a929c1cc5cdbf53fe6d676e3484ea 461 PANTHER PTHR30024 1 153 2.3E-135 T 22-04-2016 R615_RS09990 254a929c1cc5cdbf53fe6d676e3484ea 461 PANTHER PTHR30024:SF7 170 440 2.3E-135 T 22-04-2016 R615_RS09990 254a929c1cc5cdbf53fe6d676e3484ea 461 PANTHER PTHR30024:SF7 1 153 2.3E-135 T 22-04-2016 R615_RS10685 1254c9b7ac0e9c37ec8ca8a0dc4617ee 312 Gene3D G3DSA:3.40.50.720 13 106 2.2E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS10685 1254c9b7ac0e9c37ec8ca8a0dc4617ee 312 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site R615_RS10685 1254c9b7ac0e9c37ec8ca8a0dc4617ee 312 Gene3D G3DSA:3.40.50.720 107 289 4.2E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS10685 1254c9b7ac0e9c37ec8ca8a0dc4617ee 312 PANTHER PTHR10996 1 309 2.9E-74 T 22-04-2016 R615_RS10685 1254c9b7ac0e9c37ec8ca8a0dc4617ee 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 286 1.3E-41 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 R615_RS10685 1254c9b7ac0e9c37ec8ca8a0dc4617ee 312 SUPERFAMILY SSF51735 98 287 1.57E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain R615_RS10685 1254c9b7ac0e9c37ec8ca8a0dc4617ee 312 SUPERFAMILY SSF52283 1 118 6.59E-26 T 22-04-2016 R615_RS10685 1254c9b7ac0e9c37ec8ca8a0dc4617ee 312 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 309 3.2E-19 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 R615_RS10685 1254c9b7ac0e9c37ec8ca8a0dc4617ee 312 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 189 211 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site R615_RS14155 80f2b32d4c51ebc59885c1631db14b30 501 PANTHER PTHR30029 1 488 3.8E-222 T 22-04-2016 R615_RS14155 80f2b32d4c51ebc59885c1631db14b30 501 Pfam PF04293 SpoVR like protein 10 441 6.4E-178 T 22-04-2016 IPR007390 Sporulation stage V, protein R R615_RS14155 80f2b32d4c51ebc59885c1631db14b30 501 PANTHER PTHR30029:SF2 1 488 3.8E-222 T 22-04-2016 R615_RS09475 fa500c21ec607a5da49887f249a95db7 239 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 11 228 1.3E-25 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 R615_RS09475 fa500c21ec607a5da49887f249a95db7 239 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 23 170 5.8E-17 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 R615_RS17565 27e383bd0d06a1076a7bec4d8c6f6d2f 174 Pfam PF14316 Domain of unknown function (DUF4381) 12 155 5.6E-29 T 22-04-2016 IPR025489 Protein of unknown function (DUF4381 R615_RS11005 1a1e7d8a6d6707fc062c5f631ece2148 897 Pfam PF03993 Domain of Unknown Function (DUF349) 520 597 1.7E-12 T 22-04-2016 IPR007139 Protein of unknown function DUF349 R615_RS11005 1a1e7d8a6d6707fc062c5f631ece2148 897 Pfam PF03993 Domain of Unknown Function (DUF349) 602 667 7.4E-12 T 22-04-2016 IPR007139 Protein of unknown function DUF349 R615_RS11005 1a1e7d8a6d6707fc062c5f631ece2148 897 SUPERFAMILY SSF48371 13 151 3.33E-6 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 R615_RS14075 2fda424988d812526dfd9f5a34470c9c 260 Pfam PF01203 Type II secretion system (T2SS), protein N 45 210 1.7E-13 T 22-04-2016 IPR022792 Type II secretion system, protein N R615_RS08015 15aab16b87764c55638aea863b9a79e8 421 SUPERFAMILY SSF53474 21 282 1.61E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS08015 15aab16b87764c55638aea863b9a79e8 421 PANTHER PTHR10992 20 161 6.2E-23 T 22-04-2016 R615_RS08015 15aab16b87764c55638aea863b9a79e8 421 PANTHER PTHR10992 199 283 6.2E-23 T 22-04-2016 R615_RS08015 15aab16b87764c55638aea863b9a79e8 421 Pfam PF12697 Alpha/beta hydrolase family 43 267 1.3E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS08015 15aab16b87764c55638aea863b9a79e8 421 Gene3D G3DSA:3.40.50.1820 21 282 1.2E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS08015 15aab16b87764c55638aea863b9a79e8 421 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 6.7E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS08015 15aab16b87764c55638aea863b9a79e8 421 PRINTS PR00111 Alpha/beta hydrolase fold signature 64 79 6.7E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS08015 15aab16b87764c55638aea863b9a79e8 421 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 6.7E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS08015 15aab16b87764c55638aea863b9a79e8 421 PRINTS PR00111 Alpha/beta hydrolase fold signature 227 241 6.7E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS01510 6361d321862cfbcbdad6d43b585751bf 219 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 10 207 4.6E-13 T 22-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 R615_RS12195 81cc975f54dfd697f98b6d3a4705b4e8 508 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 193 504 1.0E-130 T 22-04-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase R615_RS12195 81cc975f54dfd697f98b6d3a4705b4e8 508 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 26 183 4.6E-51 T 22-04-2016 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices R615_RS11055 37143de3cd0a037e91210d1fd609531f 272 PANTHER PTHR30566:SF11 27 271 1.3E-40 T 22-04-2016 R615_RS11055 37143de3cd0a037e91210d1fd609531f 272 SUPERFAMILY SSF50182 106 168 1.11E-16 T 22-04-2016 IPR010920 LSM domain R615_RS11055 37143de3cd0a037e91210d1fd609531f 272 Pfam PF00924 Mechanosensitive ion channel 64 264 1.8E-31 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 R615_RS11055 37143de3cd0a037e91210d1fd609531f 272 Gene3D G3DSA:2.30.30.60 122 168 1.2E-15 T 22-04-2016 R615_RS11055 37143de3cd0a037e91210d1fd609531f 272 PANTHER PTHR30566 27 271 1.3E-40 T 22-04-2016 R615_RS11350 a73e12910e857f7edd9db5276fc31d03 170 SUPERFAMILY SSF81342 5 168 2.35E-30 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 R615_RS11350 a73e12910e857f7edd9db5276fc31d03 170 Pfam PF01292 Prokaryotic cytochrome b561 8 169 1.2E-20 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 R615_RS11350 a73e12910e857f7edd9db5276fc31d03 170 Gene3D G3DSA:1.20.950.20 33 155 6.9E-11 T 22-04-2016 R615_RS17335 c222e556f6c3fd72e1e12b0aee6e80c7 126 Pfam PF10975 Protein of unknown function (DUF2802) 59 123 6.0E-16 T 22-04-2016 IPR021244 Protein of unknown function DUF2802 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 SUPERFAMILY SSF52374 1 163 5.14E-81 T 22-04-2016 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 SUPERFAMILY SSF52374 234 388 5.14E-81 T 22-04-2016 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 PANTHER PTHR10055:SF6 233 391 3.0E-147 T 22-04-2016 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 PANTHER PTHR10055:SF6 1 162 3.0E-147 T 22-04-2016 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 136 157 1.9E-19 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 58 77 1.9E-19 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 7 23 1.9E-19 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 Pfam PF00579 tRNA synthetases class I (W and Y) 233 340 1.7E-10 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 Pfam PF00579 tRNA synthetases class I (W and Y) 1 161 2.7E-46 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 Gene3D G3DSA:3.40.50.620 1 161 7.2E-80 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 Gene3D G3DSA:3.40.50.620 232 265 7.2E-80 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 Gene3D G3DSA:1.10.240.10 266 355 5.1E-30 T 22-04-2016 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 PANTHER PTHR10055 233 391 3.0E-147 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 PANTHER PTHR10055 1 162 3.0E-147 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 R615_RS06030 4ab82064d83fa1c4ed200e875256a29d 391 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 3 12 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 R615_RS12285 78042bcd61c2aa169823e73a30ed11e7 294 Pfam PF01774 UreD urease accessory protein 60 268 2.4E-38 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 R615_RS12285 78042bcd61c2aa169823e73a30ed11e7 294 PANTHER PTHR33643:SF1 2 291 2.8E-31 T 22-04-2016 R615_RS12285 78042bcd61c2aa169823e73a30ed11e7 294 PANTHER PTHR33643 2 291 2.8E-31 T 22-04-2016 R615_RS12285 78042bcd61c2aa169823e73a30ed11e7 294 Hamap MF_01384 Urease accessory protein UreD [ureD]. 18 278 27.747 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 R615_RS01815 545c853260940f00da28232e8b67999f 962 Gene3D G3DSA:4.10.1080.10 334 527 8.0E-13 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01815 545c853260940f00da28232e8b67999f 962 Pfam PF07581 The GLUG motif 167 191 0.0018 T 22-04-2016 IPR011493 GLUG R615_RS00455 bfa92d2eb50e998cf51e494e9479a472 372 PANTHER PTHR19353:SF34 7 361 4.4E-94 T 22-04-2016 R615_RS00455 bfa92d2eb50e998cf51e494e9479a472 372 Pfam PF00487 Fatty acid desaturase 65 341 4.4E-31 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 R615_RS00455 bfa92d2eb50e998cf51e494e9479a472 372 PANTHER PTHR19353 7 361 4.4E-94 T 22-04-2016 R615_RS09565 15e5f7dc99d2061c1fb6cb9312ffb720 344 PANTHER PTHR11732:SF112 1 133 5.6E-163 T 22-04-2016 R615_RS09565 15e5f7dc99d2061c1fb6cb9312ffb720 344 PANTHER PTHR11732:SF112 150 344 5.6E-163 T 22-04-2016 R615_RS09565 15e5f7dc99d2061c1fb6cb9312ffb720 344 Pfam PF00248 Aldo/keto reductase family 15 334 2.7E-68 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain R615_RS09565 15e5f7dc99d2061c1fb6cb9312ffb720 344 Gene3D G3DSA:3.20.20.100 1 340 7.1E-105 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain R615_RS09565 15e5f7dc99d2061c1fb6cb9312ffb720 344 SUPERFAMILY SSF51430 1 342 2.23E-106 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain R615_RS09565 15e5f7dc99d2061c1fb6cb9312ffb720 344 PANTHER PTHR11732 1 133 5.6E-163 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta R615_RS09565 15e5f7dc99d2061c1fb6cb9312ffb720 344 PANTHER PTHR11732 150 344 5.6E-163 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta R615_RS14605 ca67cfae2bb385c1306c6adb0747d338 136 PANTHER PTHR30574:SF1 5 129 1.8E-21 T 22-04-2016 R615_RS14605 ca67cfae2bb385c1306c6adb0747d338 136 PANTHER PTHR30574 5 129 1.8E-21 T 22-04-2016 R615_RS06485 02665905ca3d7e083cc49e9662377864 194 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 3 173 1.6E-11 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase R615_RS04125 5b51510f4c597b7b7ab62b90cfccf409 410 Gene3D G3DSA:2.60.120.580 147 164 1.5E-67 T 22-04-2016 R615_RS04125 5b51510f4c597b7b7ab62b90cfccf409 410 Gene3D G3DSA:2.60.120.580 213 281 1.5E-67 T 22-04-2016 R615_RS04125 5b51510f4c597b7b7ab62b90cfccf409 410 Gene3D G3DSA:2.60.120.580 5 94 1.5E-67 T 22-04-2016 R615_RS04125 5b51510f4c597b7b7ab62b90cfccf409 410 Pfam PF03069 Acetamidase/Formamidase family 7 384 1.5E-175 T 22-04-2016 IPR004304 Acetamidase/Formamidase GO:0016811 R615_RS04125 5b51510f4c597b7b7ab62b90cfccf409 410 PANTHER PTHR31891:SF1 1 403 3.2E-233 T 22-04-2016 R615_RS04125 5b51510f4c597b7b7ab62b90cfccf409 410 PANTHER PTHR31891 1 403 3.2E-233 T 22-04-2016 R615_RS04125 5b51510f4c597b7b7ab62b90cfccf409 410 SUPERFAMILY SSF141130 15 164 4.45E-79 T 22-04-2016 R615_RS04125 5b51510f4c597b7b7ab62b90cfccf409 410 SUPERFAMILY SSF141130 213 382 4.45E-79 T 22-04-2016 R615_RS06450 3fb1c3b49c26b04672a92221af468ed5 193 Gene3D G3DSA:3.40.1410.10 29 191 1.7E-40 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain R615_RS06450 3fb1c3b49c26b04672a92221af468ed5 193 Pfam PF01947 Protein of unknown function (DUF98) 37 188 3.8E-15 T 22-04-2016 IPR002800 Protein of unknown function DUF98 R615_RS06450 3fb1c3b49c26b04672a92221af468ed5 193 SUPERFAMILY SSF64288 30 188 8.63E-35 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain R615_RS03540 53085ccc676c8bbc44f6f56d5d19ce74 288 PANTHER PTHR33973 1 280 1.3E-57 T 22-04-2016 R615_RS03540 53085ccc676c8bbc44f6f56d5d19ce74 288 Pfam PF07103 Protein of unknown function (DUF1365) 8 269 1.5E-63 T 22-04-2016 IPR010775 Protein of unknown function DUF1365 R615_RS05470 935dfb406c01090b00471c3b810598e8 249 Pfam PF09347 Domain of unknown function (DUF1989) 11 181 5.7E-54 T 22-04-2016 IPR018959 Domain of unknown function DUF1989 R615_RS05470 935dfb406c01090b00471c3b810598e8 249 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 6 235 6.9E-95 T 22-04-2016 IPR017792 Urea carboxylase-associated protein 2 R615_RS05470 935dfb406c01090b00471c3b810598e8 249 PANTHER PTHR31527:SF0 17 240 2.1E-22 T 22-04-2016 R615_RS05470 935dfb406c01090b00471c3b810598e8 249 PANTHER PTHR31527 17 240 2.1E-22 T 22-04-2016 R615_RS09025 dd1f7f5f1e85baa28430414165d35a4f 285 PIRSF PIRSF028069 36 274 6.8E-69 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 R615_RS09025 dd1f7f5f1e85baa28430414165d35a4f 285 Pfam PF11932 Protein of unknown function (DUF3450) 42 266 1.4E-69 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 R615_RS08785 245902a08e6e8b83341cf0bc20f37f89 423 PIRSF PIRSF006060 1 423 4.7E-57 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 R615_RS08785 245902a08e6e8b83341cf0bc20f37f89 423 Pfam PF13520 Amino acid permease 2 363 2.5E-34 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 R615_RS08785 245902a08e6e8b83341cf0bc20f37f89 423 PANTHER PTHR11785 2 358 2.2E-104 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 R615_RS08785 245902a08e6e8b83341cf0bc20f37f89 423 PANTHER PTHR11785:SF385 2 358 2.2E-104 T 22-04-2016 R615_RS05300 7f2ebf83fdaf829eb9564124aeada43f 272 Pfam PF01435 Peptidase family M48 65 245 1.3E-32 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 R615_RS05300 7f2ebf83fdaf829eb9564124aeada43f 272 Gene3D G3DSA:3.30.2010.10 75 147 6.4E-12 T 22-04-2016 R615_RS05300 7f2ebf83fdaf829eb9564124aeada43f 272 PANTHER PTHR22726 4 255 1.5E-56 T 22-04-2016 R615_RS10680 f12ffe4b3b7669c381d52684186f26ed 292 SUPERFAMILY SSF49313 41 127 2.35E-7 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 R615_RS10545 2ab86f39e31911b8a7a387c5908d9824 427 SUPERFAMILY SSF56954 14 415 1.44E-76 T 22-04-2016 R615_RS10545 2ab86f39e31911b8a7a387c5908d9824 427 PANTHER PTHR30203 11 414 4.8E-51 T 22-04-2016 R615_RS10545 2ab86f39e31911b8a7a387c5908d9824 427 Pfam PF02321 Outer membrane efflux protein 237 413 3.8E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS10545 2ab86f39e31911b8a7a387c5908d9824 427 Pfam PF02321 Outer membrane efflux protein 23 208 9.1E-20 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS10545 2ab86f39e31911b8a7a387c5908d9824 427 PANTHER PTHR30203:SF3 11 414 4.8E-51 T 22-04-2016 R615_RS10545 2ab86f39e31911b8a7a387c5908d9824 427 Gene3D G3DSA:1.20.1600.10 14 415 1.7E-78 T 22-04-2016 R615_RS10545 2ab86f39e31911b8a7a387c5908d9824 427 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 414 7.9E-63 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 R615_RS10690 52751635b2fbcaf3349e07eca63b517b 70 SUPERFAMILY SSF46589 9 66 2.56E-13 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 R615_RS10690 52751635b2fbcaf3349e07eca63b517b 70 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 9 66 1.7E-16 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 R615_RS10690 52751635b2fbcaf3349e07eca63b517b 70 Gene3D G3DSA:1.10.287.380 15 65 6.1E-6 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 R615_RS01140 6a058f873eb304d5c83cada5df616e3b 63 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 22 63 2.0E-9 T 22-04-2016 R615_RS01140 6a058f873eb304d5c83cada5df616e3b 63 Pfam PF13617 YnbE-like lipoprotein 9 60 4.0E-24 T 22-04-2016 IPR025985 YnbE-like lipoprotein R615_RS06880 72b40aa7f0dc6e3992f1e97aa34dd826 250 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 2 246 1.4E-60 T 22-04-2016 IPR026387 Outer membrane protein R615_RS11690 b715ff6aed28bb89a2485990ae8a71b5 140 Gene3D G3DSA:1.10.490.10 20 139 8.7E-36 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 R615_RS11690 b715ff6aed28bb89a2485990ae8a71b5 140 PIRSF PIRSF002030 12 140 3.4E-34 T 22-04-2016 IPR016339 Truncated hemoglobin, group 1 R615_RS11690 b715ff6aed28bb89a2485990ae8a71b5 140 SUPERFAMILY SSF46458 24 139 7.61E-29 T 22-04-2016 IPR009050 Globin-like R615_RS11690 b715ff6aed28bb89a2485990ae8a71b5 140 Pfam PF01152 Bacterial-like globin 25 136 1.0E-18 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 R615_RS11690 b715ff6aed28bb89a2485990ae8a71b5 140 PANTHER PTHR10681 22 137 2.0E-15 T 22-04-2016 R615_RS12060 12c1d525c6d3bc4c7f983e4538d3b8c9 140 PANTHER PTHR20941 5 100 1.7E-17 T 22-04-2016 R615_RS12060 12c1d525c6d3bc4c7f983e4538d3b8c9 140 Gene3D G3DSA:3.30.70.560 5 100 4.7E-23 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS12060 12c1d525c6d3bc4c7f983e4538d3b8c9 140 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 100 2.3E-17 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS12060 12c1d525c6d3bc4c7f983e4538d3b8c9 140 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 101 1.6E-17 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS12060 12c1d525c6d3bc4c7f983e4538d3b8c9 140 SUPERFAMILY SSF55083 1 101 1.83E-20 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 R615_RS12060 12c1d525c6d3bc4c7f983e4538d3b8c9 140 PANTHER PTHR20941:SF10 5 100 1.7E-17 T 22-04-2016 R615_RS11610 28e65985130063382edb3fead0a9f098 185 SUPERFAMILY SSF55811 10 182 2.57E-39 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS11610 28e65985130063382edb3fead0a9f098 185 Pfam PF00293 NUDIX domain 49 158 2.0E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 R615_RS11610 28e65985130063382edb3fead0a9f098 185 Gene3D G3DSA:3.90.79.10 10 180 4.6E-44 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 R615_RS11610 28e65985130063382edb3fead0a9f098 185 ProSitePatterns PS00893 Nudix box signature. 83 104 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 R615_RS11610 28e65985130063382edb3fead0a9f098 185 PANTHER PTHR11839 7 184 8.3E-31 T 22-04-2016 R615_RS11610 28e65985130063382edb3fead0a9f098 185 PANTHER PTHR11839:SF9 7 184 8.3E-31 T 22-04-2016 R615_RS10655 8b9ff1822dbedf45ef54b78c8b479ea2 206 PIRSF PIRSF035170 5 206 6.1E-52 T 22-04-2016 IPR009218 Predicted HD phosphohydrolase R615_RS10655 8b9ff1822dbedf45ef54b78c8b479ea2 206 SUPERFAMILY SSF109604 29 202 4.29E-21 T 22-04-2016 R615_RS10655 8b9ff1822dbedf45ef54b78c8b479ea2 206 PANTHER PTHR21174 27 206 9.3E-35 T 22-04-2016 IPR009218 Predicted HD phosphohydrolase R615_RS15540 93246e594f9ffdfe34865efd5e08ddc0 99 PANTHER PTHR11206 8 98 3.7E-13 T 22-04-2016 R615_RS15540 93246e594f9ffdfe34865efd5e08ddc0 99 PANTHER PTHR11206:SF94 8 98 3.7E-13 T 22-04-2016 R615_RS15540 93246e594f9ffdfe34865efd5e08ddc0 99 Pfam PF01554 MatE 48 95 3.5E-6 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 R615_RS15545 6580108eb3a46daf8902764a98a58d67 492 SUPERFAMILY SSF56349 404 467 8.24E-15 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 R615_RS15545 6580108eb3a46daf8902764a98a58d67 492 SUPERFAMILY SSF56349 223 368 8.24E-15 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 R615_RS15545 6580108eb3a46daf8902764a98a58d67 492 Gene3D G3DSA:1.10.443.10 396 477 6.5E-17 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 R615_RS15545 6580108eb3a46daf8902764a98a58d67 492 Gene3D G3DSA:1.10.443.10 228 351 6.5E-17 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 R615_RS00950 d773673daa529e48be13d3c88654a96e 166 SUPERFAMILY SSF53098 8 160 1.43E-14 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS00950 d773673daa529e48be13d3c88654a96e 166 Gene3D G3DSA:3.30.420.10 4 123 7.9E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 R615_RS04535 fb7b5c9f90397913379d3547f3381ccd 96 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 19 93 1.2E-28 T 22-04-2016 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 R615_RS08555 e5705036067c94d8d8950b9630da3cdb 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 179 1.5E-52 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 R615_RS08555 e5705036067c94d8d8950b9630da3cdb 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 2.1E-19 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 R615_RS08555 e5705036067c94d8d8950b9630da3cdb 182 PANTHER PTHR14269:SF13 1 178 2.8E-75 T 22-04-2016 R615_RS08555 e5705036067c94d8d8950b9630da3cdb 182 PIRSF PIRSF000847 1 182 4.1E-45 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 R615_RS08555 e5705036067c94d8d8950b9630da3cdb 182 PANTHER PTHR14269 1 178 2.8E-75 T 22-04-2016 R615_RS08555 e5705036067c94d8d8950b9630da3cdb 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 R615_RS06625 ddb1488fb916c7830fc19f0afca4178e 79 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 6 68 2.5E-35 T 22-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 R615_RS06625 ddb1488fb916c7830fc19f0afca4178e 79 Gene3D G3DSA:1.10.720.30 14 72 4.1E-33 T 22-04-2016 IPR003034 SAP domain R615_RS15810 dd83561a316ea7ebaf5ddc16a61fed07 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 9.0E-24 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15810 dd83561a316ea7ebaf5ddc16a61fed07 101 PANTHER PTHR19836 1 101 7.4E-55 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 R615_RS15810 dd83561a316ea7ebaf5ddc16a61fed07 101 Gene3D G3DSA:4.10.830.10 41 101 2.9E-29 T 22-04-2016 R615_RS15810 dd83561a316ea7ebaf5ddc16a61fed07 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.256 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid R615_RS15810 dd83561a316ea7ebaf5ddc16a61fed07 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 R615_RS15810 dd83561a316ea7ebaf5ddc16a61fed07 101 SUPERFAMILY SSF57716 2 101 1.28E-35 T 22-04-2016 R615_RS08260 c212bcf1a2f2e5facf4dd40c6ce837e7 149 PIRSF PIRSF030820 3 149 1.6E-45 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 R615_RS08260 c212bcf1a2f2e5facf4dd40c6ce837e7 149 Pfam PF06073 Bacterial protein of unknown function (DUF934) 43 146 8.7E-40 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 R615_RS16985 46d453e169784f22bbd1ade04976707c 126 Pfam PF03899 ATP synthase I chain 15 111 3.7E-22 T 22-04-2016 IPR005598 ATP synthase protein I R615_RS04505 9d733e7f90e9ad42962ad0f4e2131b18 205 PANTHER PTHR34846 12 192 2.9E-34 T 22-04-2016 R615_RS04505 9d733e7f90e9ad42962ad0f4e2131b18 205 SUPERFAMILY SSF69118 19 195 4.32E-30 T 22-04-2016 IPR029032 AhpD-like R615_RS04505 9d733e7f90e9ad42962ad0f4e2131b18 205 Gene3D G3DSA:1.20.1290.10 51 194 3.2E-28 T 22-04-2016 IPR029032 AhpD-like R615_RS04505 9d733e7f90e9ad42962ad0f4e2131b18 205 Pfam PF02627 Carboxymuconolactone decarboxylase family 64 123 3.5E-9 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 R615_RS04505 9d733e7f90e9ad42962ad0f4e2131b18 205 PANTHER PTHR34846:SF2 12 192 2.9E-34 T 22-04-2016 R615_RS10455 546e4ba1ec19ed6ca9524b4da77d2f06 74 Pfam PF11747 Killing trait 7 74 4.6E-31 T 22-04-2016 IPR021070 Killing trait, RebB R615_RS05080 c39d069633e160d9ccbd386418ebad4e 258 Pfam PF01311 Bacterial export proteins, family 1 15 245 6.8E-65 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 R615_RS05080 c39d069633e160d9ccbd386418ebad4e 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 3.7E-67 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 R615_RS05080 c39d069633e160d9ccbd386418ebad4e 258 PANTHER PTHR30065 2 256 3.9E-80 T 22-04-2016 R615_RS05080 c39d069633e160d9ccbd386418ebad4e 258 PANTHER PTHR30065:SF1 2 256 3.9E-80 T 22-04-2016 R615_RS05080 c39d069633e160d9ccbd386418ebad4e 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 7.9E-27 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 R615_RS05080 c39d069633e160d9ccbd386418ebad4e 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 7.9E-27 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 R615_RS05080 c39d069633e160d9ccbd386418ebad4e 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 7.9E-27 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 R615_RS05080 c39d069633e160d9ccbd386418ebad4e 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 7.9E-27 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 R615_RS08920 284774fc9481f1cd192701c102ad66a3 446 Pfam PF02321 Outer membrane efflux protein 48 228 1.1E-11 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS08920 284774fc9481f1cd192701c102ad66a3 446 Pfam PF02321 Outer membrane efflux protein 258 426 3.2E-14 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 R615_RS08920 284774fc9481f1cd192701c102ad66a3 446 Gene3D G3DSA:1.20.1600.10 44 426 2.4E-39 T 22-04-2016 R615_RS08920 284774fc9481f1cd192701c102ad66a3 446 PANTHER PTHR30203 42 436 4.0E-43 T 22-04-2016 R615_RS08920 284774fc9481f1cd192701c102ad66a3 446 SUPERFAMILY SSF56954 19 427 3.27E-61 T 22-04-2016 R615_RS08920 284774fc9481f1cd192701c102ad66a3 446 PANTHER PTHR30203:SF1 42 436 4.0E-43 T 22-04-2016 R615_RS06260 f5522ae92b3f17dc130123d4fb1338d7 336 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 248 2.1E-69 T 22-04-2016 IPR018642 Protein of unknown function DUF2066 R615_RS09330 35120da65569c2e101e1b32b878f29a4 643 Gene3D G3DSA:1.25.40.10 54 175 1.1E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09330 35120da65569c2e101e1b32b878f29a4 643 SUPERFAMILY SSF48452 58 151 1.27E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS09330 35120da65569c2e101e1b32b878f29a4 643 SUPERFAMILY SSF48452 233 298 1.27E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 R615_RS10110 0c654789ecd8067d0a65ed43ce33b8f0 216 Pfam PF06080 Protein of unknown function (DUF938) 21 212 4.9E-58 T 22-04-2016 IPR010342 Protein of unknown function DUF938 R615_RS10110 0c654789ecd8067d0a65ed43ce33b8f0 216 SUPERFAMILY SSF53335 31 203 5.21E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS10110 0c654789ecd8067d0a65ed43ce33b8f0 216 PANTHER PTHR20974 16 213 3.5E-66 T 22-04-2016 IPR010342 Protein of unknown function DUF938 R615_RS10110 0c654789ecd8067d0a65ed43ce33b8f0 216 PANTHER PTHR20974:SF0 16 213 3.5E-66 T 22-04-2016 R615_RS10110 0c654789ecd8067d0a65ed43ce33b8f0 216 Gene3D G3DSA:3.40.50.150 30 172 9.1E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS03015 bff21c0f874052c7fbb4a4f30352ec81 83 Pfam PF14357 Domain of unknown function (DUF4404) 6 83 6.1E-22 T 22-04-2016 IPR025516 Protein of unknown function DUF4404 R615_RS06745 2a53a6971aef95ffc0d5e98a99a6debd 196 Pfam PF03923 Uncharacterized lipoprotein 53 193 4.0E-17 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG R615_RS11600 3b98e9d70b828a67ff33606dea4aeac2 226 SUPERFAMILY SSF56925 25 79 1.44E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS11600 3b98e9d70b828a67ff33606dea4aeac2 226 SUPERFAMILY SSF56925 120 226 1.44E-10 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS11600 3b98e9d70b828a67ff33606dea4aeac2 226 Gene3D G3DSA:2.40.160.20 24 80 6.2E-12 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS11600 3b98e9d70b828a67ff33606dea4aeac2 226 Gene3D G3DSA:2.40.160.20 119 226 6.2E-12 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 R615_RS17715 eb922e0c547de210fe947f3a631b691e 67 Gene3D G3DSA:1.10.10.10 2 59 1.5E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS17715 eb922e0c547de210fe947f3a631b691e 67 SUPERFAMILY SSF46785 2 61 2.27E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS04475 1f21850bb01e9e0df0c1ce419610bb23 150 Pfam PF01906 Putative heavy-metal-binding 56 144 1.6E-24 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 R615_RS04475 1f21850bb01e9e0df0c1ce419610bb23 150 Gene3D G3DSA:3.30.110.70 56 144 2.8E-25 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 R615_RS04475 1f21850bb01e9e0df0c1ce419610bb23 150 PANTHER PTHR34068 57 145 8.8E-18 T 22-04-2016 R615_RS04475 1f21850bb01e9e0df0c1ce419610bb23 150 SUPERFAMILY SSF117782 56 145 1.06E-24 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 R615_RS05425 80a9d6d392542347ac35c75d5f0db7b1 559 SUPERFAMILY SSF53474 40 353 1.97E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS05425 80a9d6d392542347ac35c75d5f0db7b1 559 Gene3D G3DSA:3.40.50.1820 14 201 5.3E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS05425 80a9d6d392542347ac35c75d5f0db7b1 559 Gene3D G3DSA:3.40.50.1820 253 360 5.3E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS05425 80a9d6d392542347ac35c75d5f0db7b1 559 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 51 206 2.7E-15 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 R615_RS07490 6d3233672391d78ccff623bf914cb95e 234 PANTHER PTHR30399 11 222 3.0E-30 T 22-04-2016 R615_RS07490 6d3233672391d78ccff623bf914cb95e 234 Pfam PF01863 Protein of unknown function DUF45 30 228 5.6E-42 T 22-04-2016 IPR002725 Protein of unknown function DUF45 R615_RS13710 bc23bc6cb4e91a73e992fc40b3ada8fa 192 SMART SM00900 97 177 0.0013 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 R615_RS13710 bc23bc6cb4e91a73e992fc40b3ada8fa 192 Pfam PF04205 FMN-binding domain 98 174 4.6E-5 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 R615_RS17745 759c38acbf780a499165e968bae11013 157 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 114 3.9E-18 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 R615_RS17745 759c38acbf780a499165e968bae11013 157 Pfam PF09523 Protein of unknown function (DUF2390) 14 112 2.0E-25 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 R615_RS09525 9d4cfc045438ceafaaa9eef6b85894fe 212 Pfam PF12847 Methyltransferase domain 3 163 2.5E-24 T 22-04-2016 R615_RS09525 9d4cfc045438ceafaaa9eef6b85894fe 212 Gene3D G3DSA:3.40.50.150 17 110 7.3E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS09525 9d4cfc045438ceafaaa9eef6b85894fe 212 SUPERFAMILY SSF53335 8 102 3.65E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS09525 9d4cfc045438ceafaaa9eef6b85894fe 212 PIRSF PIRSF028234 1 212 1.4E-79 T 22-04-2016 IPR016876 Uncharacterised conserved protein UCP028234 R615_RS16130 f5070974e1483f93892e0d3bed8e1585 173 Pfam PF07484 Phage Tail Collar Domain 8 63 3.3E-25 T 22-04-2016 IPR011083 Phage tail collar domain R615_RS16130 f5070974e1483f93892e0d3bed8e1585 173 PANTHER PTHR34720 1 173 2.6E-54 T 22-04-2016 R615_RS16130 f5070974e1483f93892e0d3bed8e1585 173 SUPERFAMILY SSF88874 1 167 2.88E-45 T 22-04-2016 R615_RS16130 f5070974e1483f93892e0d3bed8e1585 173 Gene3D G3DSA:3.90.1340.10 1 67 4.0E-28 T 22-04-2016 IPR011083 Phage tail collar domain R615_RS11955 a925adecd49223755cc03fc976f979f8 368 Pfam PF14302 Domain of unknown function (DUF4377) 200 253 1.9E-7 T 22-04-2016 IPR025485 Domain of unknown function DUF4377 R615_RS12215 bee492bf1dd405475dcd6a4993786ed1 156 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 6.8E-62 T 22-04-2016 IPR021334 Protein of unknown function DUF2947 R615_RS13950 00cca8536ad3a277f0176ea03a1c026e 985 Pfam PF12262 Bacterial virulence factor lipase N-terminal 3 281 8.7E-20 T 22-04-2016 IPR025920 Bacterial virulence factor lipase, N-terminal domain R615_RS13950 00cca8536ad3a277f0176ea03a1c026e 985 Gene3D G3DSA:3.40.50.1820 548 592 5.9E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS13950 00cca8536ad3a277f0176ea03a1c026e 985 Gene3D G3DSA:3.40.50.1820 684 841 5.9E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS13950 00cca8536ad3a277f0176ea03a1c026e 985 SUPERFAMILY SSF53474 704 840 2.45E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS13950 00cca8536ad3a277f0176ea03a1c026e 985 SUPERFAMILY SSF53474 543 591 2.45E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS11515 8b9f7e81d84567fade97c8548f031172 273 Pfam PF10977 Protein of unknown function (DUF2797) 36 269 3.1E-94 T 22-04-2016 IPR021246 Protein of unknown function DUF2797 R615_RS00635 6f784e67871f408c0e47de870c47c543 63 Pfam PF13490 Putative zinc-finger 4 38 4.7E-6 T 22-04-2016 IPR027383 Putative zinc-finger R615_RS01810 6b07afa9560df5ef8eb8ba0066b0a194 1320 Pfam PF01476 LysM domain 1233 1279 7.9E-7 T 22-04-2016 IPR018392 LysM domain R615_RS01810 6b07afa9560df5ef8eb8ba0066b0a194 1320 Gene3D G3DSA:3.10.350.10 1233 1280 1.3E-5 T 22-04-2016 IPR018392 LysM domain R615_RS14695 ee8c43b7d74848367fbd47ce3a08218e 82 Gene3D G3DSA:1.10.10.10 4 80 1.6E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS14695 ee8c43b7d74848367fbd47ce3a08218e 82 SUPERFAMILY SSF46785 7 80 1.49E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS07945 4dc3fd7cf097218ce15dcbbcb072453b 166 Pfam PF11911 Protein of unknown function (DUF3429) 28 155 1.5E-19 T 22-04-2016 IPR021836 Protein of unknown function DUF3429 R615_RS05255 edcfefd25aeecef010f16fe08f8e725f 110 Pfam PF04219 Protein of unknown function, DUF 9 95 2.3E-33 T 22-04-2016 IPR007335 Protein of unknown function DUF413 R615_RS00980 c59f51e9ec22897d05612a65397d5577 182 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 24 2.5E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal R615_RS09265 1bb5e0fdf2576548cf6dc27521857bb3 259 Pfam PF09836 Putative DNA-binding domain 9 98 7.0E-27 T 22-04-2016 IPR018640 Putative DNA-binding domain, bacteria R615_RS05050 02d7d49562ec6faf063812edcbe33338 177 Pfam PF03748 Flagellar basal body-associated protein FliL 76 177 3.2E-22 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 R615_RS05050 02d7d49562ec6faf063812edcbe33338 177 PANTHER PTHR35091:SF1 2 177 2.0E-39 T 22-04-2016 R615_RS05050 02d7d49562ec6faf063812edcbe33338 177 PANTHER PTHR35091 2 177 2.0E-39 T 22-04-2016 R615_RS15435 3c275e1b057d9f7c1d2bc096a0ea2033 95 Pfam PF10719 Late competence development protein ComFB 8 91 3.8E-28 T 22-04-2016 IPR019657 Late competence development protein ComFB R615_RS09045 aec7f0ece83e6ec91c859f4c09a2621b 444 Pfam PF07586 Protein of unknown function (DUF1552) 43 352 5.8E-101 T 22-04-2016 IPR011447 Protein of unknown function DUF1552 R615_RS08300 df093efe874314e5dbb1c21ea65cf036 164 SUPERFAMILY SSF52091 6 106 7.06E-13 T 22-04-2016 IPR002645 STAS domain R615_RS08300 df093efe874314e5dbb1c21ea65cf036 164 PIRSF PIRSF029548 1 160 1.2E-45 T 22-04-2016 IPR014557 Uncharacterised conserved protein UCP029548, STAS-type R615_RS08300 df093efe874314e5dbb1c21ea65cf036 164 Gene3D G3DSA:3.30.750.24 6 106 3.0E-12 T 22-04-2016 IPR002645 STAS domain R615_RS11785 6fdf7e0f9cdec6c66bfc6bb7dbf15da9 163 Pfam PF03918 Cytochrome C biogenesis protein 9 147 2.1E-50 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family R615_RS11785 6fdf7e0f9cdec6c66bfc6bb7dbf15da9 163 PANTHER PTHR30009:SF6 7 147 2.8E-38 T 22-04-2016 R615_RS11785 6fdf7e0f9cdec6c66bfc6bb7dbf15da9 163 PANTHER PTHR30009 7 147 2.8E-38 T 22-04-2016 R615_RS03745 3e079be7a7f7bede70b0853a7a52e360 144 Pfam PF07696 7TMR-DISM extracellular 2 75 116 9.4E-5 T 22-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 R615_RS02880 37c354fa0a0c16469fd497e569b427cf 217 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 114 204 2.0E-20 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 R615_RS02880 37c354fa0a0c16469fd497e569b427cf 217 SMART SM00702 22 204 2.3E-18 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 R615_RS02880 37c354fa0a0c16469fd497e569b427cf 217 PANTHER PTHR12907:SF14 13 204 2.7E-48 T 22-04-2016 R615_RS02880 37c354fa0a0c16469fd497e569b427cf 217 PANTHER PTHR12907 13 204 2.7E-48 T 22-04-2016 R615_RS05805 3b9d92468fd1431a21d3c2adf0897106 81 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 3.3E-28 T 22-04-2016 IPR018680 Protein of unknown function DUF2164 R615_RS11665 b0de3f6cfb2e0eaf95a1fba2f563e419 763 Gene3D G3DSA:1.10.760.10 666 762 2.7E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS11665 b0de3f6cfb2e0eaf95a1fba2f563e419 763 Gene3D G3DSA:1.10.760.10 545 576 2.7E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS11665 b0de3f6cfb2e0eaf95a1fba2f563e419 763 SUPERFAMILY SSF46626 741 763 1.6E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS11665 b0de3f6cfb2e0eaf95a1fba2f563e419 763 SUPERFAMILY SSF46626 546 636 1.6E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS11665 b0de3f6cfb2e0eaf95a1fba2f563e419 763 Gene3D G3DSA:2.60.40.10 133 169 2.6E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold R615_RS11665 b0de3f6cfb2e0eaf95a1fba2f563e419 763 Gene3D G3DSA:2.60.40.10 77 96 2.6E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold R615_RS00145 a8bd95d13542f6d30b5d19fe2c8f6225 151 Pfam PF06853 Protein of unknown function (DUF1249) 23 140 1.9E-41 T 22-04-2016 IPR009659 Protein of unknown function DUF1249 R615_RS00145 a8bd95d13542f6d30b5d19fe2c8f6225 151 PANTHER PTHR38774:SF1 1 150 1.6E-40 T 22-04-2016 R615_RS00145 a8bd95d13542f6d30b5d19fe2c8f6225 151 PANTHER PTHR38774 1 150 1.6E-40 T 22-04-2016 R615_RS15460 d837a28d8d95eed2b9122b5ad830aa01 509 Pfam PF14224 Domain of unknown function (DUF4331) 26 502 4.8E-148 T 22-04-2016 IPR025566 Protein of unknown function DUF4331 R615_RS03095 9811e88a0c1968ef49b84d2e6ab8da45 208 PANTHER PTHR30353 26 207 7.0E-43 T 22-04-2016 IPR032818 DedA family R615_RS03095 9811e88a0c1968ef49b84d2e6ab8da45 208 Pfam PF09335 SNARE associated Golgi protein 50 167 5.6E-16 T 22-04-2016 IPR032816 SNARE associated Golgi protein R615_RS03095 9811e88a0c1968ef49b84d2e6ab8da45 208 PANTHER PTHR30353:SF5 26 207 7.0E-43 T 22-04-2016 R615_RS06960 d5771378cc5675df018797025a714128 318 PANTHER PTHR10285 52 192 6.9E-41 T 22-04-2016 R615_RS06960 d5771378cc5675df018797025a714128 318 PANTHER PTHR10285 226 254 6.9E-41 T 22-04-2016 R615_RS06960 d5771378cc5675df018797025a714128 318 Gene3D G3DSA:3.40.50.300 39 313 8.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06960 d5771378cc5675df018797025a714128 318 SUPERFAMILY SSF52540 61 311 7.54E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS06960 d5771378cc5675df018797025a714128 318 PANTHER PTHR10285:SF78 52 192 6.9E-41 T 22-04-2016 R615_RS06960 d5771378cc5675df018797025a714128 318 PANTHER PTHR10285:SF78 226 254 6.9E-41 T 22-04-2016 R615_RS06960 d5771378cc5675df018797025a714128 318 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 63 181 6.9E-5 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 R615_RS13450 af8a03c9936f9728cca965b63d459b21 74 Gene3D G3DSA:1.10.720.30 21 74 3.7E-26 T 22-04-2016 IPR003034 SAP domain R615_RS13450 af8a03c9936f9728cca965b63d459b21 74 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 13 74 1.4E-30 T 22-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 R615_RS00710 38ca86f77e1403b0f493dc34116b56f5 346 Gene3D G3DSA:3.40.190.10 27 183 6.6E-27 T 22-04-2016 R615_RS00710 38ca86f77e1403b0f493dc34116b56f5 346 Pfam PF12849 PBP superfamily domain 20 309 6.7E-43 T 22-04-2016 IPR024370 PBP domain R615_RS00710 38ca86f77e1403b0f493dc34116b56f5 346 SUPERFAMILY SSF53850 25 340 4.78E-69 T 22-04-2016 R615_RS00710 38ca86f77e1403b0f493dc34116b56f5 346 PANTHER PTHR30570 4 338 7.1E-27 T 22-04-2016 R615_RS14910 d5f6a8066be748c8f77f5aa7cb255666 622 Gene3D G3DSA:2.60.40.920 322 370 0.001 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain R615_RS14910 d5f6a8066be748c8f77f5aa7cb255666 622 Gene3D G3DSA:2.60.40.920 211 284 1.7E-8 T 22-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain R615_RS14910 d5f6a8066be748c8f77f5aa7cb255666 622 SUPERFAMILY SSF49373 212 283 8.89E-9 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments R615_RS17570 1cd7a9c633843590b6fb10e1c919429a 232 Pfam PF16956 Putative general bacterial porin 4 120 2.1E-10 T 22-04-2016 IPR031593 Putative general bacterial porin R615_RS16590 2fa27c8469536dd046fa02b83a69c53c 70 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 5 68 1.4E-18 T 22-04-2016 IPR012662 Conserved hypothetical protein CHP02449 R615_RS10200 1956647e96a7c645da6b544b3457ec77 305 Pfam PF13835 Domain of unknown function (DUF4194) 24 201 9.1E-37 T 22-04-2016 IPR025449 Protein of unknown function DUF4194 R615_RS06690 ce70f2991f6f1d3ab52863a3e6c15a0d 191 SUPERFAMILY SSF53271 7 164 1.7E-24 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS06690 ce70f2991f6f1d3ab52863a3e6c15a0d 191 Pfam PF00156 Phosphoribosyl transferase domain 4 153 5.6E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 R615_RS06690 ce70f2991f6f1d3ab52863a3e6c15a0d 191 Gene3D G3DSA:3.40.50.2020 2 163 3.8E-23 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like R615_RS09115 4f7a992f9ff6c94c3bae4ddcd93d712c 178 Pfam PF02620 Uncharacterized ACR, COG1399 66 176 6.1E-18 T 22-04-2016 IPR003772 Protein of unknown function DUF177 R615_RS09115 4f7a992f9ff6c94c3bae4ddcd93d712c 178 PANTHER PTHR38099 7 178 4.4E-39 T 22-04-2016 R615_RS08005 87a45db0308b83a3b32f70fb86e66746 224 Pfam PF16537 Type II secretion system protein B 154 211 8.8E-19 T 22-04-2016 IPR032389 Type II secretion system protein B R615_RS01430 7fa8784fe3068e395920eb75900f5670 142 PANTHER PTHR35024:SF2 13 124 6.2E-26 T 22-04-2016 R615_RS01430 7fa8784fe3068e395920eb75900f5670 142 PANTHER PTHR35024 13 124 6.2E-26 T 22-04-2016 R615_RS01430 7fa8784fe3068e395920eb75900f5670 142 Pfam PF04519 Polymer-forming cytoskeletal 14 114 8.5E-26 T 22-04-2016 IPR007607 Protein of unknown function DUF583 R615_RS17030 bd296feb422c3ad29c0179cba5327e20 90 Pfam PF03413 Peptidase propeptide and YPEB domain 44 86 5.6E-6 T 22-04-2016 IPR025711 PepSY domain R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 Pfam PF00209 Sodium:neurotransmitter symporter family 11 128 1.8E-29 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 Pfam PF00209 Sodium:neurotransmitter symporter family 158 365 2.7E-18 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 PANTHER PTHR11616:SF167 12 366 2.8E-132 T 22-04-2016 R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 PANTHER PTHR11616:SF167 423 497 2.8E-132 T 22-04-2016 R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 PANTHER PTHR11616 12 366 2.8E-132 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 PANTHER PTHR11616 423 497 2.8E-132 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 33 47 - T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 SUPERFAMILY SSF161070 422 496 6.67E-13 T 22-04-2016 R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 SUPERFAMILY SSF161070 10 378 2.62E-113 T 22-04-2016 R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 2.1E-19 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 477 497 2.1E-19 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 260 280 2.1E-19 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 R615_RS03800 8ee947078417dd7f8c318f910b6a063c 497 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 2.1E-19 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 R615_RS00650 63f19080b9501805804e9163d86855b0 301 PANTHER PTHR30606 1 295 8.7E-62 T 22-04-2016 R615_RS00650 63f19080b9501805804e9163d86855b0 301 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 286 1.2E-47 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 R615_RS00650 63f19080b9501805804e9163d86855b0 301 PIRSF PIRSF026649 1 295 1.1E-79 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 R615_RS07965 24bdc4ed487243f0a589a1bf626bd5a5 187 PANTHER PTHR30353 12 184 2.1E-12 T 22-04-2016 IPR032818 DedA family R615_RS07965 24bdc4ed487243f0a589a1bf626bd5a5 187 Pfam PF09335 SNARE associated Golgi protein 33 145 1.4E-13 T 22-04-2016 IPR032816 SNARE associated Golgi protein R615_RS10400 459162c3a6cca8ab812deb1001049d7c 242 Gene3D G3DSA:3.30.70.1230 43 205 5.0E-15 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 R615_RS10400 459162c3a6cca8ab812deb1001049d7c 242 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 44 201 5.1E-9 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 R615_RS10400 459162c3a6cca8ab812deb1001049d7c 242 SUPERFAMILY SSF55073 39 198 4.24E-19 T 22-04-2016 IPR029787 Nucleotide cyclase R615_RS16335 b9f554033366823585b394698286e9ff 903 Pfam PF11739 Dicarboxylate transport 695 897 3.5E-50 T 22-04-2016 IPR021730 Dicarboxylate transport R615_RS00770 a78f4261d3be95d4c39189adc2062bd3 268 PANTHER PTHR37468 1 259 1.0E-58 T 22-04-2016 R615_RS00770 a78f4261d3be95d4c39189adc2062bd3 268 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 222 1.6E-36 T 22-04-2016 R615_RS03740 2733a476755f054566c62ab39bc82917 98 Pfam PF07695 7TM diverse intracellular signalling 38 95 1.4E-14 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 R615_RS13520 8af9b49b0d3404d3a64ab89948279f37 222 PANTHER PTHR31088 4 221 1.8E-21 T 22-04-2016 R615_RS13520 8af9b49b0d3404d3a64ab89948279f37 222 Pfam PF04012 PspA/IM30 family 7 181 6.5E-16 T 22-04-2016 IPR007157 PspA/IM30 R615_RS13520 8af9b49b0d3404d3a64ab89948279f37 222 PANTHER PTHR31088:SF7 4 221 1.8E-21 T 22-04-2016 R615_RS07095 c010a35e2dc90b71f7f98dac06593a5e 260 Pfam PF10972 Peptidoglycan-binding protein, CsiV 14 148 4.5E-9 T 22-04-2016 IPR021241 Peptidoglycan-binding protein, CsiV R615_RS07095 c010a35e2dc90b71f7f98dac06593a5e 260 Pfam PF10972 Peptidoglycan-binding protein, CsiV 160 258 4.2E-17 T 22-04-2016 IPR021241 Peptidoglycan-binding protein, CsiV R615_RS10050 e23f0cad9fa6de909e74a4d344e75517 87 Pfam PF01402 Ribbon-helix-helix protein, copG family 4 41 1.0E-4 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 R615_RS10050 e23f0cad9fa6de909e74a4d344e75517 87 SUPERFAMILY SSF47598 3 41 2.4E-8 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 R615_RS06390 5c13ce0bbf12eb4ba315eca88b431514 354 PIRSF PIRSF036407 6 352 9.2E-115 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 R615_RS06390 5c13ce0bbf12eb4ba315eca88b431514 354 PANTHER PTHR10256 11 350 4.6E-134 T 22-04-2016 R615_RS06390 5c13ce0bbf12eb4ba315eca88b431514 354 SUPERFAMILY SSF56042 170 343 1.05E-50 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS06390 5c13ce0bbf12eb4ba315eca88b431514 354 Hamap MF_00625 Selenide, water dikinase [selD]. 10 353 44.255 T 22-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 R615_RS06390 5c13ce0bbf12eb4ba315eca88b431514 354 SUPERFAMILY SSF55326 12 166 4.04E-40 T 22-04-2016 R615_RS06390 5c13ce0bbf12eb4ba315eca88b431514 354 Pfam PF00586 AIR synthase related protein, N-terminal domain 55 162 1.3E-18 T 22-04-2016 IPR016188 PurM-like, N-terminal domain R615_RS06390 5c13ce0bbf12eb4ba315eca88b431514 354 TIGRFAM TIGR00476 selD: selenide, water dikinase 12 319 5.8E-132 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 R615_RS06390 5c13ce0bbf12eb4ba315eca88b431514 354 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 343 2.2E-27 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS06390 5c13ce0bbf12eb4ba315eca88b431514 354 Gene3D G3DSA:3.30.1330.10 43 167 3.4E-31 T 22-04-2016 IPR016188 PurM-like, N-terminal domain R615_RS06390 5c13ce0bbf12eb4ba315eca88b431514 354 Gene3D G3DSA:3.90.650.10 181 345 2.6E-16 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain R615_RS13505 70d67765b26243a74fc8a36283643673 158 Pfam PF04186 FxsA cytoplasmic membrane protein 6 108 5.9E-32 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 R615_RS13505 70d67765b26243a74fc8a36283643673 158 PANTHER PTHR35335:SF1 3 158 3.7E-32 T 22-04-2016 R615_RS13505 70d67765b26243a74fc8a36283643673 158 PANTHER PTHR35335 3 158 3.7E-32 T 22-04-2016 R615_RS14350 bcb1be9ebd80e979254f9057a7a0a6a8 66 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 1.4E-15 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 R615_RS00050 9fdbed205d1a357b677521fc7b2520b3 95 PANTHER PTHR13504:SF33 13 92 2.0E-27 T 22-04-2016 R615_RS00050 9fdbed205d1a357b677521fc7b2520b3 95 PANTHER PTHR13504 13 92 2.0E-27 T 22-04-2016 R615_RS00050 9fdbed205d1a357b677521fc7b2520b3 95 Gene3D G3DSA:1.10.10.10 22 81 7.1E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS00050 9fdbed205d1a357b677521fc7b2520b3 95 SUPERFAMILY SSF46785 21 83 2.12E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS03850 f5f09b26936c9b3da3915d3bd52f7212 246 Gene3D G3DSA:3.30.530.20 47 210 4.3E-20 T 22-04-2016 IPR023393 START-like domain R615_RS03850 f5f09b26936c9b3da3915d3bd52f7212 246 SUPERFAMILY SSF55961 36 210 3.43E-23 T 22-04-2016 R615_RS07755 77f64b470d0e14fec6cb1cc0480cdc99 293 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 1 279 1.9E-44 T 22-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system R615_RS11705 6c0ba991ee8faedade127d40956f03f6 230 Gene3D G3DSA:2.60.40.420 56 145 1.3E-8 T 22-04-2016 IPR008972 Cupredoxin R615_RS11705 6c0ba991ee8faedade127d40956f03f6 230 SUPERFAMILY SSF49503 49 145 1.28E-15 T 22-04-2016 IPR008972 Cupredoxin R615_RS01165 13eaa55ab5ff3e6dba0a9bf3616a913e 223 PANTHER PTHR38765 1 221 3.1E-40 T 22-04-2016 R615_RS01165 13eaa55ab5ff3e6dba0a9bf3616a913e 223 Pfam PF04340 Protein of unknown function, DUF484 6 218 6.7E-48 T 22-04-2016 IPR007435 Protein of unknown function DUF484 R615_RS09305 bde2a3b5a524627c1c91ce3d23fe2994 171 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 141 2.1E-13 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 R615_RS11745 553bf154d4a564855948e2f1fb7649fe 369 SUPERFAMILY SSF56935 73 369 4.12E-32 T 22-04-2016 R615_RS11745 553bf154d4a564855948e2f1fb7649fe 369 SUPERFAMILY SSF56935 18 45 4.12E-32 T 22-04-2016 R615_RS04710 8eb10dcbfa14922f3e9c844078f76699 407 Pfam PF13440 Polysaccharide biosynthesis protein 25 297 2.3E-9 T 22-04-2016 R615_RS00215 4370ad9d5953792b42589829cb7646df 230 Gene3D G3DSA:3.40.50.1240 1 223 5.1E-27 T 22-04-2016 IPR029033 Histidine phosphatase superfamily R615_RS00215 4370ad9d5953792b42589829cb7646df 230 SUPERFAMILY SSF53254 1 220 3.19E-31 T 22-04-2016 IPR029033 Histidine phosphatase superfamily R615_RS00215 4370ad9d5953792b42589829cb7646df 230 SMART SM00855 3 173 0.0011 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 R615_RS00215 4370ad9d5953792b42589829cb7646df 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 111 209 3.8E-12 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 R615_RS00215 4370ad9d5953792b42589829cb7646df 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 85 9.7E-7 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 R615_RS13220 03bc4f932f8fe02decffc3dd92cc036f 710 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 262 704 4.6E-18 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit R615_RS11695 e3ae2cecabbfbe3145ab5a572a14bd95 287 Pfam PF11231 Protein of unknown function (DUF3034) 35 282 5.2E-99 T 22-04-2016 IPR021393 Protein of unknown function DUF3034 R615_RS10635 3630a45340ef2383f8fc783f1694d66d 775 SUPERFAMILY SSF52540 4 234 9.87E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10635 3630a45340ef2383f8fc783f1694d66d 775 SUPERFAMILY SSF52540 575 751 9.87E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10635 3630a45340ef2383f8fc783f1694d66d 775 Gene3D G3DSA:3.40.50.300 546 562 5.9E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10635 3630a45340ef2383f8fc783f1694d66d 775 Gene3D G3DSA:3.40.50.300 4 188 5.9E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS10635 3630a45340ef2383f8fc783f1694d66d 775 Gene3D G3DSA:3.40.50.300 639 750 5.9E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS03555 541d4e166dba9cbba51dab3eb4166cc1 149 Pfam PF12680 SnoaL-like domain 17 118 1.2E-12 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain R615_RS03555 541d4e166dba9cbba51dab3eb4166cc1 149 SUPERFAMILY SSF54427 13 135 1.33E-19 T 22-04-2016 IPR032710 NTF2-like domain R615_RS03555 541d4e166dba9cbba51dab3eb4166cc1 149 Gene3D G3DSA:3.10.450.50 12 133 3.3E-14 T 22-04-2016 IPR032710 NTF2-like domain R615_RS07680 9f43127637a7902dd071d9e34638dd48 386 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 9 377 1.8E-142 T 22-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition R615_RS07680 9f43127637a7902dd071d9e34638dd48 386 SUPERFAMILY SSF55729 179 346 7.95E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS07680 9f43127637a7902dd071d9e34638dd48 386 PANTHER PTHR31384 10 314 8.0E-53 T 22-04-2016 R615_RS07680 9f43127637a7902dd071d9e34638dd48 386 Gene3D G3DSA:3.40.630.30 179 326 9.3E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase R615_RS07680 9f43127637a7902dd071d9e34638dd48 386 PANTHER PTHR31384:SF26 10 314 8.0E-53 T 22-04-2016 R615_RS13335 bf1d1714383dc17b5a4b61ac6bf6b71d 662 PANTHER PTHR30047 15 658 4.6E-218 T 22-04-2016 R615_RS13335 bf1d1714383dc17b5a4b61ac6bf6b71d 662 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 497 2.2E-146 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 R615_RS13335 bf1d1714383dc17b5a4b61ac6bf6b71d 662 PANTHER PTHR30047:SF6 15 658 4.6E-218 T 22-04-2016 R615_RS13335 bf1d1714383dc17b5a4b61ac6bf6b71d 662 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 497 5.2E-182 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 R615_RS15605 09fb632043fc6cedd576c9fb476ea320 232 Pfam PF13795 HupE / UreJ protein 49 199 2.0E-50 T 22-04-2016 IPR032809 Putative HupE/UreJ protein R615_RS09385 9d4513ac5136da459ac485338a4b843a 94 SUPERFAMILY SSF160191 2 89 4.32E-37 T 22-04-2016 R615_RS09385 9d4513ac5136da459ac485338a4b843a 94 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 5 81 2.0E-19 T 22-04-2016 IPR027354 YcgL domain R615_RS09385 9d4513ac5136da459ac485338a4b843a 94 PANTHER PTHR38109 5 84 8.4E-29 T 22-04-2016 R615_RS09385 9d4513ac5136da459ac485338a4b843a 94 Pfam PF05166 YcgL domain 6 78 1.2E-32 T 22-04-2016 IPR027354 YcgL domain R615_RS09385 9d4513ac5136da459ac485338a4b843a 94 Hamap MF_01866 Protein YcgL [ycgL]. 4 91 26.199 T 22-04-2016 IPR027354 YcgL domain R615_RS16455 0a492e6c82c547dbf005e89b30d0151b 437 PANTHER PTHR39569:SF1 2 435 1.9E-49 T 22-04-2016 R615_RS16455 0a492e6c82c547dbf005e89b30d0151b 437 SUPERFAMILY SSF55154 1 208 4.09E-38 T 22-04-2016 IPR033469 CYTH-like domain R615_RS16455 0a492e6c82c547dbf005e89b30d0151b 437 SMART SM01118 2 203 5.9E-28 T 22-04-2016 IPR023577 CYTH domain R615_RS16455 0a492e6c82c547dbf005e89b30d0151b 437 Pfam PF01928 CYTH domain 3 197 2.5E-25 T 22-04-2016 IPR023577 CYTH domain R615_RS16455 0a492e6c82c547dbf005e89b30d0151b 437 PANTHER PTHR39569 2 435 1.9E-49 T 22-04-2016 R615_RS16455 0a492e6c82c547dbf005e89b30d0151b 437 Gene3D G3DSA:2.40.320.10 3 211 5.6E-32 T 22-04-2016 IPR023577 CYTH domain R615_RS13885 81b8357a4e3fc93ee78350b7592ac6d9 168 Pfam PF04664 Opioid growth factor receptor (OGFr) conserved region 5 137 1.5E-4 T 22-04-2016 IPR006757 Opioid growth factor receptor (OGFr) conserved domain GO:0004872|GO:0016020 R615_RS15315 b4a86c517a518a5a820417cad88d3f58 148 Gene3D G3DSA:1.10.260.40 56 91 1.6E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS15315 b4a86c517a518a5a820417cad88d3f58 148 SUPERFAMILY SSF47413 46 92 8.57E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 R615_RS08675 5fa0a57c722725f150b924bbce593782 156 Pfam PF01526 Tn3 transposase DDE domain 2 130 4.6E-34 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 R615_RS14265 bc464cf8e2ea3e93d1e715e15f9aa237 299 PANTHER PTHR39456 9 290 6.7E-65 T 22-04-2016 R615_RS14265 bc464cf8e2ea3e93d1e715e15f9aa237 299 PANTHER PTHR39456:SF2 9 290 6.7E-65 T 22-04-2016 R615_RS14265 bc464cf8e2ea3e93d1e715e15f9aa237 299 PIRSF PIRSF007580 8 287 5.9E-67 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS14265 bc464cf8e2ea3e93d1e715e15f9aa237 299 Pfam PF10118 Predicted metal-dependent hydrolase 22 267 4.9E-73 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 R615_RS06350 4a427dae7a4f718990c9c5793a1f675f 374 Pfam PF14088 Domain of unknown function (DUF4268) 228 362 1.6E-37 T 22-04-2016 IPR025364 Domain of unknown function DUF4268 R615_RS15710 c32a983b573ac6d1ec82d28c0a28e100 526 PANTHER PTHR30365:SF0 1 312 2.9E-251 T 22-04-2016 R615_RS15710 c32a983b573ac6d1ec82d28c0a28e100 526 PANTHER PTHR30365:SF0 378 522 2.9E-251 T 22-04-2016 R615_RS15710 c32a983b573ac6d1ec82d28c0a28e100 526 PANTHER PTHR30365 1 312 2.9E-251 T 22-04-2016 R615_RS15710 c32a983b573ac6d1ec82d28c0a28e100 526 PANTHER PTHR30365 378 522 2.9E-251 T 22-04-2016 R615_RS15710 c32a983b573ac6d1ec82d28c0a28e100 526 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 2.9E-172 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 R615_RS06775 ea05201e14067eedb3c126223f53f90b 111 Pfam PF14343 PrcB C-terminal 36 88 5.2E-10 T 22-04-2016 IPR025748 PrcB C-terminal domain R615_RS17530 1441512e13eda0b807ffdbcc0fc9a7f2 198 SUPERFAMILY SSF58104 90 196 9.68E-5 T 22-04-2016 R615_RS10485 9efde94ae6499a7a5818ad0dd79e4e70 113 Pfam PF11333 Protein of unknown function (DUF3135) 2 82 7.3E-35 T 22-04-2016 IPR021482 Protein of unknown function DUF3135 R615_RS13940 1e7bd1870c692c38964e2f02222bde7e 454 Gene3D G3DSA:2.50.20.10 341 450 1.8E-40 T 22-04-2016 R615_RS13940 1e7bd1870c692c38964e2f02222bde7e 454 Gene3D G3DSA:2.50.20.10 160 308 1.8E-40 T 22-04-2016 R615_RS13940 1e7bd1870c692c38964e2f02222bde7e 454 Pfam PF07044 Protein of unknown function (DUF1329) 84 449 1.1E-153 T 22-04-2016 IPR010752 Protein of unknown function DUF1329 R615_RS14775 251f560b41db05a824253afacad2503d 192 Pfam PF02169 LPP20 lipoprotein 42 149 2.1E-11 T 22-04-2016 IPR024952 Lipoprotein LPP20-like R615_RS12120 2dd3490161b9b8c7b0068837aca1e5f5 230 Gene3D G3DSA:3.60.15.10 4 224 3.4E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS12120 2dd3490161b9b8c7b0068837aca1e5f5 230 Pfam PF12706 Beta-lactamase superfamily domain 16 196 1.6E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS12120 2dd3490161b9b8c7b0068837aca1e5f5 230 SUPERFAMILY SSF56281 8 202 1.25E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase R615_RS09200 b4ee7b26da09808b3bb8f6f6fb83ecee 289 Pfam PF12697 Alpha/beta hydrolase family 32 271 7.7E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 R615_RS09200 b4ee7b26da09808b3bb8f6f6fb83ecee 289 SUPERFAMILY SSF53474 21 276 1.23E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS09200 b4ee7b26da09808b3bb8f6f6fb83ecee 289 Gene3D G3DSA:3.40.50.1820 27 275 1.1E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS11755 275e4da44b2197be12960b9b7dca3998 332 SUPERFAMILY SSF49401 250 326 4.22E-5 T 22-04-2016 IPR008966 Adhesion domain R615_RS10470 1e77a05082ee3808cc16bdfbe98198b6 64 Pfam PF06945 Protein of unknown function (DUF1289) 7 52 7.1E-20 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 R615_RS10470 1e77a05082ee3808cc16bdfbe98198b6 64 PANTHER PTHR35175 1 57 4.0E-17 T 22-04-2016 R615_RS07250 44b8ac75b0aee7699fc0c0fddad8d6bc 1220 Pfam PF04865 Baseplate J-like protein 956 1113 2.9E-7 T 22-04-2016 IPR006949 Baseplate protein J-like R615_RS07055 7c690d09a275ea188780c2c77992a1a7 152 SUPERFAMILY SSF52540 38 150 1.43E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS07055 7c690d09a275ea188780c2c77992a1a7 152 Pfam PF03846 Cell division inhibitor SulA 31 99 1.4E-11 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 R615_RS07055 7c690d09a275ea188780c2c77992a1a7 152 Gene3D G3DSA:3.40.50.300 38 150 9.4E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase R615_RS17675 42db9f2fd0fb817be549dfde032a666a 295 Pfam PF12118 SprA-related family 95 231 4.5E-50 T 22-04-2016 IPR021973 SprA-related family R615_RS04875 f7d825b173a66ecd68879c47bbcb36f7 399 Pfam PF10082 Putative beta-barrel porin 2 22 397 8.6E-39 T 22-04-2016 IPR018759 Putative beta-barrel porin 2 R615_RS13480 0eb38610e718ea58d0308857e142cc83 242 SUPERFAMILY SSF53850 52 230 1.93E-10 T 22-04-2016 R615_RS10145 87060cd4fc35fc7b8b4d156e74a8f872 94 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 93 2.6E-35 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 R615_RS10145 87060cd4fc35fc7b8b4d156e74a8f872 94 PANTHER PTHR10160 4 93 2.5E-25 T 22-04-2016 R615_RS05440 ad7ba852603768c28375004bbd298fcd 372 Pfam PF00487 Fatty acid desaturase 65 341 2.5E-31 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 R615_RS05440 ad7ba852603768c28375004bbd298fcd 372 PANTHER PTHR19353:SF34 7 366 1.6E-87 T 22-04-2016 R615_RS05440 ad7ba852603768c28375004bbd298fcd 372 PANTHER PTHR19353 7 366 1.6E-87 T 22-04-2016 R615_RS11520 e0ae0dfbb0a6cd2c5f6fec3dc6517160 81 Pfam PF07023 Protein of unknown function (DUF1315) 4 74 4.5E-25 T 22-04-2016 IPR009749 Protein of unknown function DUF1315 R615_RS06950 e689a0229fd533927e45a6417d0d36a1 403 SUPERFAMILY SSF53448 38 402 1.24E-95 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases R615_RS08700 cc2d1feacfafce8e22309db7720a16d3 99 Pfam PF11666 Protein of unknown function (DUF2933) 19 68 1.3E-23 T 22-04-2016 IPR021682 Protein of unknown function DUF2933 R615_RS04990 68863cd967034a9e3f01be659d27b67d 95 SUPERFAMILY SSF52091 7 90 4.32E-8 T 22-04-2016 IPR002645 STAS domain R615_RS04990 68863cd967034a9e3f01be659d27b67d 95 Pfam PF13466 STAS domain 11 85 9.9E-12 T 22-04-2016 IPR002645 STAS domain R615_RS04990 68863cd967034a9e3f01be659d27b67d 95 Gene3D G3DSA:3.30.750.24 5 85 6.9E-7 T 22-04-2016 IPR002645 STAS domain R615_RS09515 72be51f130363844639673ea720007cf 332 Pfam PF12224 Putative amidoligase enzyme 22 283 2.2E-64 T 22-04-2016 IPR022025 Putative amidoligase enzyme R615_RS01135 3711f59b9cd132d6b7b9fc01dd19b409 111 PIRSF PIRSF025560 1 111 2.4E-29 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 R615_RS01135 3711f59b9cd132d6b7b9fc01dd19b409 111 Pfam PF07027 Protein of unknown function (DUF1318) 21 110 3.0E-27 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 R615_RS03695 90596e0ba443afc36541c36527bc67a3 94 Gene3D G3DSA:1.10.10.10 2 77 2.0E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain R615_RS09725 0889f88b59446e79e63b1f1b20f63451 68 Pfam PF06945 Protein of unknown function (DUF1289) 13 59 1.3E-17 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 R615_RS09725 0889f88b59446e79e63b1f1b20f63451 68 PANTHER PTHR35175 7 61 2.3E-14 T 22-04-2016 R615_RS09725 0889f88b59446e79e63b1f1b20f63451 68 PANTHER PTHR35175:SF2 7 61 2.3E-14 T 22-04-2016 R615_RS09550 4f912d82012d47a83c6ad6b8cb12c094 108 Gene3D G3DSA:3.40.30.10 37 104 2.1E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS09550 4f912d82012d47a83c6ad6b8cb12c094 108 PANTHER PTHR34386 25 104 2.0E-19 T 22-04-2016 R615_RS09550 4f912d82012d47a83c6ad6b8cb12c094 108 PANTHER PTHR34386:SF1 25 104 2.0E-19 T 22-04-2016 R615_RS09550 4f912d82012d47a83c6ad6b8cb12c094 108 Pfam PF00462 Glutaredoxin 38 96 8.9E-15 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 R615_RS09550 4f912d82012d47a83c6ad6b8cb12c094 108 SUPERFAMILY SSF52833 37 106 8.25E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold R615_RS17350 11285dbe3d951e0c1db063a1fbfd664f 129 Pfam PF09842 Predicted membrane protein (DUF2069) 9 118 4.4E-27 T 22-04-2016 IPR018643 Protein of unknown function DUF2069, membrane R615_RS14660 c895a92ab98aa4e992b826c15ab1d8f7 319 Pfam PF01925 Sulfite exporter TauE/SafE 60 277 8.8E-22 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 R615_RS06700 87ded092617bf48aa27998a4748f905e 220 Gene3D G3DSA:3.40.50.150 42 198 3.7E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS06700 87ded092617bf48aa27998a4748f905e 220 PIRSF PIRSF011491 1 220 4.2E-76 T 22-04-2016 IPR016584 S-adenosyl-L-methionine dependent methyltransferase, YbcY, predicted R615_RS06700 87ded092617bf48aa27998a4748f905e 220 SUPERFAMILY SSF53335 23 183 2.57E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase R615_RS11230 6aaed6ae91f9e9d99a7eec26f529d55f 312 PANTHER PTHR33608:SF6 5 312 4.0E-82 T 22-04-2016 R615_RS11230 6aaed6ae91f9e9d99a7eec26f529d55f 312 SUPERFAMILY SSF53300 86 168 8.89E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A R615_RS11230 6aaed6ae91f9e9d99a7eec26f529d55f 312 PANTHER PTHR33608 5 312 4.0E-82 T 22-04-2016 R615_RS11230 6aaed6ae91f9e9d99a7eec26f529d55f 312 Pfam PF01882 Protein of unknown function DUF58 50 134 2.0E-24 T 22-04-2016 IPR002881 Domain of unknown function DUF58 R615_RS15980 4e90546b8bebd49dd89ba7052b42e817 219 SUPERFAMILY SSF110997 70 139 9.94E-5 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 R615_RS12170 d0313c8f7e8c988d434acd2107795753 63 Pfam PF06945 Protein of unknown function (DUF1289) 11 57 7.8E-16 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 R615_RS12170 d0313c8f7e8c988d434acd2107795753 63 PANTHER PTHR35175 1 56 1.7E-19 T 22-04-2016 R615_RS12170 d0313c8f7e8c988d434acd2107795753 63 PANTHER PTHR35175:SF1 1 56 1.7E-19 T 22-04-2016 R615_RS00295 80086d06f7255ca9d335508b043068b7 263 Pfam PF04575 Protein of unknown function (DUF560) 80 260 2.3E-11 T 22-04-2016 IPR007655 Protein of unknown function DUF560 R615_RS02915 305adcdcb66ca1f00f4ced3554400a5a 174 Pfam PF04403 Paraquat-inducible protein A 42 161 3.0E-18 T 22-04-2016 IPR007498 Paraquat-inducible protein A R615_RS08820 1242c665cc7d3e72d9a68b4bc2f96e2b 171 Pfam PF04214 Protein of unknown function, DUF 68 137 3.1E-27 T 22-04-2016 IPR007332 Protein of unknown function DUF411 R615_RS09885 3e7c387876d84f22266a0750b355dcb9 910 Pfam PF05359 Domain of Unknown Function (DUF748) 593 718 1.3E-13 T 22-04-2016 IPR008023 Protein of unknown function DUF748 R615_RS13485 94234dfd8eaf1d36bf1ac37db1780beb 73 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 5 64 5.7E-25 T 22-04-2016 IPR018691 Protein of unknown function DUF2188 R615_RS11725 faf2305703b4d0631a8d4790d90ba236 118 Pfam PF04341 Protein of unknown function, DUF485 14 101 1.3E-16 T 22-04-2016 IPR007436 Protein of unknown function DUF485 R615_RS13705 368c0ce6b9872a4dae76877cbca442ac 242 Pfam PF03929 PepSY-associated TM region 12 241 4.0E-13 T 22-04-2016 IPR005625 PepSY-associated TM protein R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 479 582 2.5E-11 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 1961 2028 1.7E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 1220 1326 1.3E-6 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 357 422 1.3E-7 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 82 102 1.3E-7 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 423 478 1.0E-4 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 2081 2124 1.7E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 1344 1411 2.2E-4 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 1464 1477 2.2E-4 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 860 923 2.4E-4 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 1810 1943 1.6E-9 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 799 859 2.5E-11 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 963 994 2.4E-4 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS01820 4bb71c38785527d2a161e8867221cec4 2498 Gene3D G3DSA:4.10.1080.10 282 296 1.3E-7 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 R615_RS07565 3bfc847f55b016b2c68312c5fe39b1cb 58 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 3 44 1.2E-9 T 22-04-2016 IPR008621 Cbb3-type cytochrome oxidase component R615_RS03390 e8d464859ef8e0dbe43d2b2de1a91b94 146 SUPERFAMILY SSF110087 7 142 3.53E-38 T 22-04-2016 IPR007410 DR1885-like metal-binding protein R615_RS03390 e8d464859ef8e0dbe43d2b2de1a91b94 146 Pfam PF04314 Protein of unknown function (DUF461) 32 133 7.1E-30 T 22-04-2016 IPR007410 DR1885-like metal-binding protein R615_RS03390 e8d464859ef8e0dbe43d2b2de1a91b94 146 PANTHER PTHR36302 4 146 7.8E-26 T 22-04-2016 R615_RS03390 e8d464859ef8e0dbe43d2b2de1a91b94 146 PANTHER PTHR36302:SF1 4 146 7.8E-26 T 22-04-2016 R615_RS13840 675e941738f175c66ff536e0081e992d 392 SUPERFAMILY SSF103473 7 382 1.57E-32 T 22-04-2016 IPR020846 Major facilitator superfamily domain R615_RS13840 675e941738f175c66ff536e0081e992d 392 PANTHER PTHR23534 7 379 4.9E-39 T 22-04-2016 R615_RS13840 675e941738f175c66ff536e0081e992d 392 Gene3D G3DSA:1.20.1250.20 28 184 5.7E-7 T 22-04-2016 R615_RS13840 675e941738f175c66ff536e0081e992d 392 Gene3D G3DSA:1.20.1250.20 204 379 1.8E-13 T 22-04-2016 R615_RS13840 675e941738f175c66ff536e0081e992d 392 Pfam PF07690 Major Facilitator Superfamily 17 239 8.0E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 R615_RS13840 675e941738f175c66ff536e0081e992d 392 Pfam PF07690 Major Facilitator Superfamily 242 379 1.8E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 R615_RS00995 018b2ae496db686e713346249e601de9 361 Pfam PF11279 Protein of unknown function (DUF3080) 36 349 1.1E-87 T 22-04-2016 IPR021431 Protein of unknown function DUF3080 R615_RS02975 7363844f180764f7ae90b9badbcfa069 247 Pfam PF04338 Protein of unknown function, DUF481 37 247 1.8E-31 T 22-04-2016 IPR007433 Protein of unknown function DUF481 R615_RS10135 38391992482efa2d469069d928c7a87b 371 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 108 238 4.6E-5 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 R615_RS12105 ada7fea162f372ce5eb501ce49991ec7 202 Pfam PF06930 Protein of unknown function (DUF1282) 9 183 1.8E-36 T 22-04-2016 IPR009698 Protein of unknown function DUF1282 R615_RS13025 01b04efa8ed020a23f84793ac088f195 113 Pfam PF08850 Domain of unknown function (DUF1820) 10 103 6.4E-38 T 22-04-2016 IPR014949 Protein of unknown function DUF1820 R615_RS06805 e2e49037ee21c42edaf4a180c542d3af 148 PANTHER PTHR30558 8 148 1.8E-47 T 22-04-2016 R615_RS06805 e2e49037ee21c42edaf4a180c542d3af 148 TIGRFAM TIGR02801 tolR: protein TolR 13 140 1.3E-42 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 R615_RS06805 e2e49037ee21c42edaf4a180c542d3af 148 PANTHER PTHR30558:SF7 8 148 1.8E-47 T 22-04-2016 R615_RS06805 e2e49037ee21c42edaf4a180c542d3af 148 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 140 4.1E-28 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 R615_RS08330 15a56f11fd4ac30f88e1ccd1daa40c13 235 Pfam PF07314 Protein of unknown function (DUF1461) 10 201 3.3E-13 T 22-04-2016 IPR010178 Integral membrane protein 1906 R615_RS17590 5724f0918bfa3935fce4e75cbac04285 152 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 47 88 7.1E-10 T 22-04-2016 IPR001434 Domain of unknown function DUF11 R615_RS17590 5724f0918bfa3935fce4e75cbac04285 152 Pfam PF01345 Domain of unknown function DUF11 40 87 2.7E-10 T 22-04-2016 IPR001434 Domain of unknown function DUF11 R615_RS13635 6ee8651827b77e94f9cd6739f57ed23e 291 PANTHER PTHR38684 3 291 1.9E-23 T 22-04-2016 R615_RS11260 c96f0efc74447ff0876cce5568ca4e6e 317 PANTHER PTHR34184:SF2 1 314 1.6E-149 T 22-04-2016 R615_RS11260 c96f0efc74447ff0876cce5568ca4e6e 317 PANTHER PTHR34184 1 314 1.6E-149 T 22-04-2016 R615_RS11260 c96f0efc74447ff0876cce5568ca4e6e 317 Pfam PF03773 Predicted permease 14 309 1.3E-61 T 22-04-2016 IPR005524 Predicted permease DUF318 R615_RS06855 beb4f498a0f62e129173878de4d8fe54 354 Pfam PF01594 Domain of unknown function DUF20 19 345 6.2E-66 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like R615_RS06855 beb4f498a0f62e129173878de4d8fe54 354 PANTHER PTHR21716:SF19 6 346 1.9E-120 T 22-04-2016 R615_RS06855 beb4f498a0f62e129173878de4d8fe54 354 PANTHER PTHR21716 6 346 1.9E-120 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like R615_RS01635 507ecfa97ffad5af0ab7d23225a7ce81 151 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 146 1.3E-7 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain R615_RS06245 399c75a10250732d182c62c8f528b60d 253 Pfam PF11306 Protein of unknown function (DUF3108) 42 242 1.4E-20 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 R615_RS07240 b40b165434f05bed1ac7760e1a317cb4 97 Pfam PF05488 PAAR motif 19 87 5.0E-24 T 22-04-2016 IPR008727 PAAR motif R615_RS14180 a2a431fdd2015a7f01da1c86c120a4cc 543 Pfam PF13729 F plasmid transfer operon, TraF, protein 53 137 4.8E-9 T 22-04-2016 IPR032811 Putative conjugal transfer protein TraF-related R615_RS14180 a2a431fdd2015a7f01da1c86c120a4cc 543 Pfam PF13729 F plasmid transfer operon, TraF, protein 146 459 1.2E-41 T 22-04-2016 IPR032811 Putative conjugal transfer protein TraF-related R615_RS03430 e88dce54c849d9816ca8128812e2dec3 633 SUPERFAMILY SSF52317 237 353 6.41E-5 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS03430 e88dce54c849d9816ca8128812e2dec3 633 SUPERFAMILY SSF52317 101 181 6.41E-5 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like R615_RS00760 3d945949d39c4442a846ac94c606521b 107 Pfam PF11872 Protein of unknown function (DUF3392) 2 102 5.2E-35 T 22-04-2016 IPR021813 Protein of unknown function DUF3392 R615_RS17275 4e176888589403416ff8beed3bce5b7a 181 Pfam PF11086 Protein of unknown function (DUF2878) 10 152 2.3E-33 T 22-04-2016 IPR021306 Protein of unknown function DUF2878 R615_RS03250 b0d26c7cfbbfffd44e5dd96ea72d5c16 174 Pfam PF14341 PilX N-terminal 7 49 5.3E-6 T 22-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain R615_RS08765 cb775db04698e64fea2dcee740a51dab 324 Pfam PF05275 Copper resistance protein B precursor (CopB) 120 324 1.3E-83 T 22-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 R615_RS07260 73d291098c3ac075b3e20e9e5eaa6fd4 1084 SUPERFAMILY SSF49464 995 1070 1.06E-6 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain R615_RS07260 73d291098c3ac075b3e20e9e5eaa6fd4 1084 Gene3D G3DSA:2.60.40.1120 1014 1080 5.3E-10 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain R615_RS05840 f5f933042f5880999b6ea43c54775739 131 Pfam PF11042 Protein of unknown function (DUF2750) 22 123 1.8E-32 T 22-04-2016 IPR021284 Protein of unknown function DUF2750 R615_RS08105 c909647352c444681e0fbc7814acb63b 103 Pfam PF13271 Domain of unknown function (DUF4062) 6 87 4.0E-30 T 22-04-2016 IPR025139 Domain of unknown function DUF4062 R615_RS03110 f8580002e260efddc097a9e86c7119f1 336 Pfam PF12069 Protein of unknown function (DUF3549) 2 328 1.5E-106 T 22-04-2016 IPR021936 Protein of unknown function DUF3549 R615_RS17685 a2b4dcf554432ffc60f86e7dbbb23e66 253 Pfam PF11008 Protein of unknown function (DUF2846) 22 164 1.6E-37 T 22-04-2016 IPR022548 Domain of unknown function DUF2846 R615_RS09300 2c9d389291e27e7b02aa8f832aab3a2c 157 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 150 1.2E-20 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 R615_RS15135 9288bc1a3b303e96393c43decda9e3f4 391 Pfam PF06181 Protein of unknown function (DUF989) 3 298 1.1E-127 T 22-04-2016 IPR010389 Domain of unknown function DUF989 R615_RS15135 9288bc1a3b303e96393c43decda9e3f4 391 SUPERFAMILY SSF46626 293 389 1.7E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 R615_RS07605 c0ae3f35a0864aca72a3751f8026d0ff 132 Pfam PF11325 Domain of unknown function (DUF3127) 6 98 2.5E-26 T 22-04-2016 IPR021474 Protein of unknown function DUF3127 R615_RS01440 49ddc13b3d2f7623f2b3abd241124834 163 SUPERFAMILY SSF75169 59 162 1.12E-10 T 22-04-2016 IPR027396 DsrEFH-like R615_RS01440 49ddc13b3d2f7623f2b3abd241124834 163 Gene3D G3DSA:3.40.1260.10 69 161 2.0E-6 T 22-04-2016 IPR027396 DsrEFH-like R615_RS12230 65e010695aacaf7609d3f1fc4daa9735 193 Pfam PF07298 NnrU protein 4 190 1.3E-53 T 22-04-2016 IPR009915 NnrU domain R615_RS16215 2883ad4cededd4dbb72b31894206c84b 155 Pfam PF14467 Domain of unknown function (DUF4426) 34 155 2.6E-39 T 22-04-2016 IPR025218 Domain of unknown function DUF4426 R615_RS15310 f728960297f46465f506546b02c0e9b7 106 Pfam PF14076 Domain of unknown function (DUF4258) 30 104 2.4E-9 T 22-04-2016 IPR025354 Protein of unknown function DUF4258 R615_RS13800 2b569010b6d51260d80680ed9ec9e5ce 301 Gene3D G3DSA:3.40.50.2300 162 238 5.7E-4 T 22-04-2016 R615_RS17545 996163fef9d4b34b60678073ae8e89b6 987 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 260 294 1.1E-8 T 22-04-2016 IPR013431 Delta-60 repeat R615_RS17545 996163fef9d4b34b60678073ae8e89b6 987 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 187 220 2.1E-4 T 22-04-2016 IPR013431 Delta-60 repeat R615_RS08875 ec65d4dd93b74d3f04ebaca614ca5827 839 Pfam PF01526 Tn3 transposase DDE domain 443 831 1.7E-138 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 R615_RS15585 c91cd742fb57c6e80b87dec2213403c8 318 Pfam PF05569 BlaR1 peptidase M56 154 206 2.2E-8 T 22-04-2016 IPR008756 Peptidase M56 R615_RS15585 c91cd742fb57c6e80b87dec2213403c8 318 Gene3D G3DSA:3.30.2010.10 124 200 6.9E-10 T 22-04-2016 R615_RS07195 1d7500b99e11815ba75b506fc3b6fbe9 328 Pfam PF03235 Protein of unknown function DUF262 14 112 3.1E-20 T 22-04-2016 IPR004919 Domain of unknown function DUF262 R615_RS07195 1d7500b99e11815ba75b506fc3b6fbe9 328 PANTHER PTHR39639 5 263 1.2E-13 T 22-04-2016 R615_RS02735 355738c5476628e096e188a88168b826 312 SUPERFAMILY SSF53067 51 161 2.59E-6 T 22-04-2016 R615_RS17140 a3cae2247dd50adfcfebbf7fda6f4eb8 467 Pfam PF15515 MvaI/BcnI restriction endonuclease family 228 450 7.3E-25 T 22-04-2016 IPR029127 MvaI/BcnI restriction endonuclease R615_RS02315 2821c3130299625b434a4246677f684a 372 SUPERFAMILY SSF56935 15 372 7.02E-24 T 22-04-2016 R615_RS12615 c1cbd9a42c41ad37b4cc56effd0cf702 173 PANTHER PTHR30625:SF0 82 169 3.9E-20 T 22-04-2016 R615_RS12615 c1cbd9a42c41ad37b4cc56effd0cf702 173 PANTHER PTHR30625 82 169 3.9E-20 T 22-04-2016 R615_RS12615 c1cbd9a42c41ad37b4cc56effd0cf702 173 Pfam PF01618 MotA/TolQ/ExbB proton channel family 68 166 1.7E-20 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 R615_RS12235 9a4804ef818fc4dfcd37f1bc0bab0200 167 Pfam PF11286 Protein of unknown function (DUF3087) 1 164 7.3E-54 T 22-04-2016 IPR021438 Protein of unknown function DUF3087 R615_RS03875 44272e2236528a21d59ca0f136ce3eee 339 Pfam PF00487 Fatty acid desaturase 68 319 8.2E-30 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 R615_RS09970 6234055c0d4f25670a3e569961a91a1c 103 Gene3D G3DSA:3.40.190.10 1 63 6.9E-4 T 22-04-2016 R615_RS17450 470ccad0c7c90b0cb2ea7806dcbbd54b 76 Pfam PF13700 Domain of unknown function (DUF4158) 7 72 9.7E-16 T 22-04-2016 IPR025296 Domain of unknown function DUF4158 R615_RS10845 0e6e29f65a6bb141e27b98428a54f0c6 120 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 31 8.7E-7 T 22-04-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system R615_RS00460 a2d0af00859a3599e7182c732d729898 354 Pfam PF02169 LPP20 lipoprotein 47 154 1.7E-8 T 22-04-2016 IPR024952 Lipoprotein LPP20-like R615_RS06630 f68e229903bcf2e9b315b55d5314b7f5 152 SUPERFAMILY SSF48619 19 100 7.82E-8 T 22-04-2016 IPR016090 Phospholipase A2 domain KEGG: 00564+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 R615_RS10790 8125316576180852b090982d80a9b727 391 Pfam PF12094 Protein of unknown function (DUF3570) 11 365 1.7E-54 T 22-04-2016 IPR021953 Protein of unknown function DUF3570 R615_RS16500 8d4db401ab1250266dc6b8a3723da27b 357 SUPERFAMILY SSF52151 160 333 5.23E-15 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 R615_RS16500 8d4db401ab1250266dc6b8a3723da27b 357 SUPERFAMILY SSF52151 33 104 5.23E-15 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 R615_RS03725 0d9b96cad8a0225b8d9f1f7c0ea62048 319 SUPERFAMILY SSF51730 9 286 1.04E-29 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like R615_RS03725 0d9b96cad8a0225b8d9f1f7c0ea62048 319 Gene3D G3DSA:3.20.20.220 40 270 6.7E-11 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like R615_RS03725 0d9b96cad8a0225b8d9f1f7c0ea62048 319 Pfam PF02219 Methylenetetrahydrofolate reductase 170 272 1.4E-4 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 R615_RS04025 9e58c3999894b763f156fa9b8a5b58f0 417 Gene3D G3DSA:3.40.50.1820 275 385 7.0E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS04025 9e58c3999894b763f156fa9b8a5b58f0 417 Gene3D G3DSA:3.40.50.1820 113 166 7.0E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold R615_RS04025 9e58c3999894b763f156fa9b8a5b58f0 417 Pfam PF12048 Protein of unknown function (DUF3530) 18 407 1.6E-109 T 22-04-2016 IPR022529 Protein of unknown function DUF3530 R615_RS03150 9934fa69e01c58201ce554e293ff86ef 80 Pfam PF04325 Protein of unknown function (DUF465) 30 77 1.8E-16 T 22-04-2016 IPR007420 Protein of unknown function DUF465 R615_RS12520 859679d674d3641d610ca0381fc312df 121 Pfam PF16137 Domain of unknown function (DUF4845) 30 113 1.6E-16 T 22-04-2016 IPR032314 Protein of unknown function DUF4845 R615_RS01265 7a93758c666ecedec963f9ecee7d8666 525 SUPERFAMILY SSF56112 237 432 1.02E-6 T 22-04-2016 IPR011009 Protein kinase-like domain R615_RS01265 7a93758c666ecedec963f9ecee7d8666 525 Gene3D G3DSA:3.90.1200.10 298 436 8.9E-5 T 22-04-2016 R615_RS11825 9c2156d2fcb388d423d524cad2ad43ac 619 Pfam PF02120 Flagellar hook-length control protein FliK 525 601 1.2E-14 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal R615_RS06160 75ecd7e2272ac36389a3d67237a8bbf1 331 Pfam PF01943 Polysaccharide biosynthesis protein 13 281 1.9E-9 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 R615_RS05670 d3bdfc282ffdaec0cf239384a1bcadb0 71 Pfam PF14375 Cysteine-rich CWC 11 61 6.1E-14 T 22-04-2016 IPR032720 Cysteine-rich CWC R615_RS04565 ae754329ddfeeda8be53c23fe0ed2c5f 71 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 60 2.0E-16 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) R615_RS06865 b76bee8852855716577c7d2bee6e8ed0 206 Pfam PF06804 NlpB/DapX lipoprotein 79 197 2.8E-10 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein R615_RS17245 b50ff05d5fad9bd2f476bc418cbffb33 176 Pfam PF13511 Domain of unknown function (DUF4124) 13 65 1.3E-6 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 R615_RS15260 b5f2ce26277a42fa9e93e09671b08458 179 Pfam PF03929 PepSY-associated TM region 8 154 6.2E-10 T 22-04-2016 IPR005625 PepSY-associated TM protein R615_RS07505 5f29562e66917875b6867e2c58a4d2fe 111 Pfam PF09656 Putative transmembrane protein (PGPGW) 29 81 1.8E-5 T 22-04-2016 IPR019099 Uncharacterised protein family PGPGW, transmembrane R615_RS09855 5b1cd6adfe3be2f78769299cc5f3c363 308 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 8 284 7.3E-27 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD R615_RS16555 72a820c16cc6cf3d7c0243f1458f17b3 407 Pfam PF09375 Imelysin 59 347 4.5E-28 T 22-04-2016 R615_RS03275 eec80a0233e9cae37f8d2f3a13d039ce 78 SUPERFAMILY SSF54523 1 74 1.73E-13 T 22-04-2016 R615_RS04085 12f2dd2bb414e27fcfdff973b1f37dc0 103 Pfam PF11743 Protein of unknown function (DUF3301) 5 99 3.1E-27 T 22-04-2016 IPR021732 Protein of unknown function DUF3301 R615_RS00815 b96a108e40f3cf3d42db43be116a030e 121 Pfam PF02036 SCP-2 sterol transfer family 20 113 2.9E-5 T 22-04-2016 IPR003033 SCP2 sterol-binding domain