locus-tag class description DY252_RS00025 PF00905 Penicillin binding protein transpeptidase domain DY252_RS00025 PF00912 Transglycosylase DY252_RS00030 PF00912 Transglycosylase DY252_RS00035 PF01321 Creatinase/Prolidase N-terminal domain DY252_RS00035 PF00557 Metallopeptidase family M24 DY252_RS00040 PF00107 Zinc-binding dehydrogenase DY252_RS00040 PF08240 Alcohol dehydrogenase GroES-like domain DY252_RS00045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS00055 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS00060 PF00392 Bacterial regulatory proteins, gntR family DY252_RS00060 PF07729 FCD domain DY252_RS00065 PF03786 D-mannonate dehydratase (UxuA) DY252_RS00070 PF01232 Mannitol dehydrogenase Rossmann domain DY252_RS00070 PF08125 Mannitol dehydrogenase C-terminal domain DY252_RS00075 PF00294 pfkB family carbohydrate kinase DY252_RS00080 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DY252_RS00095 PF01370 NAD dependent epimerase/dehydratase family DY252_RS00125 PF08241 Methyltransferase domain DY252_RS00130 PF00534 Glycosyl transferases group 1 DY252_RS00130 PF00535 Glycosyl transferase family 2 DY252_RS00140 PF00529 HlyD membrane-fusion protein of T1SS DY252_RS00145 PF00005 ABC transporter DY252_RS00145 PF00664 ABC transporter transmembrane region DY252_RS00150 PF12802 MarR family DY252_RS00155 PF13439 Glycosyltransferase Family 4 DY252_RS00160 PF01425 Amidase DY252_RS00165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_RS00170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_RS00170 PF00005 ABC transporter DY252_RS00175 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_RS00175 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS00180 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS00185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_RS00190 PF00596 Class II Aldolase and Adducin N-terminal domain DY252_RS00200 PF00850 Histone deacetylase domain DY252_RS00205 PF00202 Aminotransferase class-III DY252_RS00210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DY252_RS00215 PF05336 L-rhamnose mutarotase DY252_RS00220 PF02653 Branched-chain amino acid transport system / permease component DY252_RS00225 PF02653 Branched-chain amino acid transport system / permease component DY252_RS00230 PF00005 ABC transporter DY252_RS00235 PF13407 Periplasmic binding protein domain DY252_RS00240 PF08220 DeoR-like helix-turn-helix domain DY252_RS00240 PF00455 DeoR C terminal sensor domain DY252_RS00245 PF00596 Class II Aldolase and Adducin N-terminal domain DY252_RS00250 PF01261 Xylose isomerase-like TIM barrel DY252_RS00270 PF03852 DNA mismatch endonuclease Vsr DY252_RS00275 PF00145 C-5 cytosine-specific DNA methylase DY252_RS00295 PF13411 MerR HTH family regulatory protein DY252_RS00300 PF02600 Disulfide bond formation protein DsbB DY252_RS00305 PF13462 Thioredoxin DY252_RS00310 PF02630 SCO1/SenC DY252_RS00315 PF04314 Copper chaperone PCu(A)C DY252_RS00325 PF01252 Signal peptidase (SPase) II DY252_RS00330 PF02630 SCO1/SenC DY252_RS00355 PF02742 Iron dependent repressor, metal binding and dimerisation domain DY252_RS00355 PF01325 Iron dependent repressor, N-terminal DNA binding domain DY252_RS00370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DY252_RS00370 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DY252_RS00375 PF08534 Redoxin DY252_RS00380 PF08534 Redoxin DY252_RS00395 PF02630 SCO1/SenC DY252_RS00410 PF02683 Cytochrome C biogenesis protein transmembrane region DY252_RS00415 PF00403 Heavy-metal-associated domain DY252_RS00435 PF13411 MerR HTH family regulatory protein DY252_RS00440 PF13411 MerR HTH family regulatory protein DY252_RS00450 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS00450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DY252_RS00450 PF00403 Heavy-metal-associated domain DY252_RS00460 PF00403 Heavy-metal-associated domain DY252_RS00460 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS00460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DY252_RS00465 PF13411 MerR HTH family regulatory protein DY252_RS00485 PF02796 Helix-turn-helix domain of resolvase DY252_RS00485 PF00239 Resolvase, N terminal domain DY252_RS00505 PF08676 MutL C terminal dimerisation domain DY252_RS00505 PF01119 DNA mismatch repair protein, C-terminal domain DY252_RS00520 PF00665 Integrase core domain DY252_RS00540 PF00300 Histidine phosphatase superfamily (branch 1) DY252_RS00545 PF00005 ABC transporter DY252_RS00545 PF08402 TOBE domain DY252_RS00550 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS00560 PF00158 Sigma-54 interaction domain DY252_RS00560 PF00072 Response regulator receiver domain DY252_RS00560 PF02954 Bacterial regulatory protein, Fis family DY252_RS00565 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS00565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS00575 PF00986 DNA gyrase B subunit, carboxyl terminus DY252_RS00575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS00575 PF00204 DNA gyrase B DY252_RS00575 PF01751 Toprim domain DY252_RS00580 PF02463 RecF/RecN/SMC N terminal domain DY252_RS00585 PF02768 DNA polymerase III beta subunit, C-terminal domain DY252_RS00585 PF00712 DNA polymerase III beta subunit, N-terminal domain DY252_RS00585 PF02767 DNA polymerase III beta subunit, central domain DY252_RS00590 PF00308 Bacterial dnaA protein DY252_RS00590 PF08299 Bacterial dnaA protein helix-turn-helix DY252_RS00590 PF11638 DnaA N-terminal domain DY252_RS00595 PF01649 Ribosomal protein S20 DY252_RS00600 PF00378 Enoyl-CoA hydratase/isomerase DY252_RS00605 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DY252_RS00605 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DY252_RS00605 PF06827 Zinc finger found in FPG and IleRS DY252_RS00610 PF01925 Sulfite exporter TauE/SafE DY252_RS00615 PF07690 Major Facilitator Superfamily DY252_RS00620 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DY252_RS00630 PF00216 Bacterial DNA-binding protein DY252_RS00635 PF01343 Peptidase family S49 DY252_RS00640 PF00575 S1 RNA binding domain DY252_RS00645 PF02224 Cytidylate kinase DY252_RS00650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DY252_RS00670 PF00155 Aminotransferase class I and II DY252_RS00675 PF00440 Bacterial regulatory proteins, tetR family DY252_RS00675 PF13977 BetI-type transcriptional repressor, C-terminal DY252_RS00680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_RS00680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_RS00685 PF00596 Class II Aldolase and Adducin N-terminal domain DY252_RS00705 PF04143 Sulphur transport DY252_RS00715 PF02540 NAD synthase DY252_RS00715 PF00117 Glutamine amidotransferase class-I DY252_RS00715 PF00958 GMP synthase C terminal domain DY252_RS00720 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_RS00725 PF00011 Hsp20/alpha crystallin family DY252_RS00735 PF12706 Beta-lactamase superfamily domain DY252_RS00735 PF00753 Metallo-beta-lactamase superfamily DY252_RS00740 PF08447 PAS fold DY252_RS00740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS00740 PF13426 PAS domain DY252_RS00745 PF13426 PAS domain DY252_RS00745 PF08447 PAS fold DY252_RS00745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS00750 PF03692 Putative zinc- or iron-chelating domain DY252_RS00755 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DY252_RS00755 PF07685 CobB/CobQ-like glutamine amidotransferase domain DY252_RS00760 PF02630 SCO1/SenC DY252_RS00770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_RS00775 PF01888 CbiD DY252_RS00780 PF02571 Precorrin-6x reductase CbiJ/CobK DY252_RS00785 PF16363 GDP-mannose 4,6 dehydratase DY252_RS00805 PF13649 Methyltransferase domain DY252_RS00810 PF00043 Glutathione S-transferase, C-terminal domain DY252_RS00810 PF13417 Glutathione S-transferase, N-terminal domain DY252_RS00815 PF07685 CobB/CobQ-like glutamine amidotransferase domain DY252_RS00820 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DY252_RS00835 PF02514 CobN/Magnesium Chelatase DY252_RS00840 PF07683 Cobalamin synthesis protein cobW C-terminal domain DY252_RS00840 PF02492 CobW/HypB/UreG, nucleotide-binding domain DY252_RS00845 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DY252_RS00855 PF00300 Histidine phosphatase superfamily (branch 1) DY252_RS00860 PF02654 Cobalamin-5-phosphate synthase DY252_RS00865 PF02277 Phosphoribosyltransferase DY252_RS00875 PF01370 NAD dependent epimerase/dehydratase family DY252_RS00880 PF13580 SIS domain DY252_RS00885 PF00294 pfkB family carbohydrate kinase DY252_RS00885 PF01467 Cytidylyltransferase-like DY252_RS00895 PF03186 CobD/Cbib protein DY252_RS00900 PF01903 CbiX DY252_RS00905 PF02570 Precorrin-8X methylmutase DY252_RS00910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_RS00915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_RS00920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_RS00925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_RS00930 PF14403 Circularly permuted ATP-grasp type 2 DY252_RS00935 PF04168 A predicted alpha-helical domain with a conserved ER motif. DY252_RS00935 PF14403 Circularly permuted ATP-grasp type 2 DY252_RS00940 PF08379 Bacterial transglutaminase-like N-terminal region DY252_RS00940 PF01841 Transglutaminase-like superfamily DY252_RS00950 PF00689 Cation transporting ATPase, C-terminus DY252_RS00950 PF00690 Cation transporter/ATPase, N-terminus DY252_RS00965 PF07690 Major Facilitator Superfamily DY252_RS00985 PF01209 ubiE/COQ5 methyltransferase family DY252_RS00995 PF01032 FecCD transport family DY252_RS01000 PF00005 ABC transporter DY252_RS01005 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DY252_RS01010 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DY252_RS01020 PF02915 Rubrerythrin DY252_RS01035 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DY252_RS01035 PF03725 3' exoribonuclease family, domain 2 DY252_RS01035 PF01138 3' exoribonuclease family, domain 1 DY252_RS01035 PF00575 S1 RNA binding domain DY252_RS01035 PF00013 KH domain DY252_RS01040 PF00312 Ribosomal protein S15 DY252_RS01045 PF09157 Pseudouridine synthase II TruB, C-terminal DY252_RS01045 PF01509 TruB family pseudouridylate synthase (N terminal domain) DY252_RS01045 PF16198 tRNA pseudouridylate synthase B C-terminal domain DY252_RS01050 PF02033 Ribosome-binding factor A DY252_RS01055 PF08364 Bacterial translation initiation factor IF-2 associated region DY252_RS01055 PF11987 Translation-initiation factor 2 DY252_RS01055 PF03144 Elongation factor Tu domain 2 DY252_RS01055 PF00009 Elongation factor Tu GTP binding domain DY252_RS01055 PF04760 Translation initiation factor IF-2, N-terminal region DY252_RS01060 PF04296 Protein of unknown function (DUF448) DY252_RS01065 PF13184 NusA-like KH domain DY252_RS01065 PF08529 NusA N-terminal domain DY252_RS01065 PF00575 S1 RNA binding domain DY252_RS01070 PF02576 RimP N-terminal domain DY252_RS01070 PF17384 RimP C-terminal SH3 domain DY252_RS01075 PF02390 Putative methyltransferase DY252_RS01080 PF02772 S-adenosylmethionine synthetase, central domain DY252_RS01080 PF00438 S-adenosylmethionine synthetase, N-terminal domain DY252_RS01080 PF02773 S-adenosylmethionine synthetase, C-terminal domain DY252_RS01085 PF01381 Helix-turn-helix DY252_RS01090 PF00795 Carbon-nitrogen hydrolase DY252_RS01095 PF00571 CBS domain DY252_RS01095 PF03471 Transporter associated domain DY252_RS01100 PF02130 Uncharacterized protein family UPF0054 DY252_RS01105 PF02562 PhoH-like protein DY252_RS01110 PF04055 Radical SAM superfamily DY252_RS01110 PF00919 Uncharacterized protein family UPF0004 DY252_RS01110 PF01938 TRAM domain DY252_RS01125 PF01475 Ferric uptake regulator family DY252_RS01140 PF00814 Glycoprotease family DY252_RS01145 PF01427 D-ala-D-ala dipeptidase DY252_RS01150 PF17912 MalK OB fold domain DY252_RS01150 PF00005 ABC transporter DY252_RS01155 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS01160 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS01165 PF01547 Bacterial extracellular solute-binding protein DY252_RS01170 PF00232 Glycosyl hydrolase family 1 DY252_RS01175 PF00356 Bacterial regulatory proteins, lacI family DY252_RS01180 PF02308 MgtC family DY252_RS01185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS01185 PF03466 LysR substrate binding domain DY252_RS01190 PF01810 LysE type translocator DY252_RS01200 PF00899 ThiF family DY252_RS01205 PF00291 Pyridoxal-phosphate dependent enzyme DY252_RS01210 PF02082 Transcriptional regulator DY252_RS01215 PF00692 dUTPase DY252_RS01220 PF04127 DNA / pantothenate metabolism flavoprotein DY252_RS01220 PF02441 Flavoprotein DY252_RS01230 PF00881 Nitroreductase family DY252_RS01235 PF00989 PAS fold DY252_RS01235 PF16736 Single Cache-like DY252_RS01235 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS01240 PF07724 AAA domain (Cdc48 subfamily) DY252_RS01240 PF00004 ATPase family associated with various cellular activities (AAA) DY252_RS01240 PF10431 C-terminal, D2-small domain, of ClpB protein DY252_RS01245 PF00227 Proteasome subunit DY252_RS01250 PF13382 Adenine deaminase C-terminal domain DY252_RS01250 PF01979 Amidohydrolase family DY252_RS01255 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_RS01255 PF00672 HAMP domain DY252_RS01255 PF02743 Cache domain DY252_RS01260 PF00475 Imidazoleglycerol-phosphate dehydratase DY252_RS01270 PF00117 Glutamine amidotransferase class-I DY252_RS01275 PF00583 Acetyltransferase (GNAT) family DY252_RS01280 PF00977 Histidine biosynthesis protein DY252_RS01285 PF00977 Histidine biosynthesis protein DY252_RS01290 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DY252_RS01295 PF01230 HIT domain DY252_RS01305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS01305 PF03466 LysR substrate binding domain DY252_RS01315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_RS01325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS01325 PF03466 LysR substrate binding domain DY252_RS01350 PF00398 Ribosomal RNA adenine dimethylase DY252_RS01355 PF00248 Aldo/keto reductase family DY252_RS01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS01365 PF03466 LysR substrate binding domain DY252_RS01370 PF01078 Magnesium chelatase, subunit ChlI DY252_RS01370 PF13335 Magnesium chelatase, subunit ChlI C-terminal DY252_RS01390 PF12802 MarR family DY252_RS01410 PF00043 Glutathione S-transferase, C-terminal domain DY252_RS01410 PF13417 Glutathione S-transferase, N-terminal domain DY252_RS01420 PF07883 Cupin domain DY252_RS01425 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DY252_RS01425 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DY252_RS01455 PF04055 Radical SAM superfamily DY252_RS01475 PF04186 FxsA cytoplasmic membrane protein DY252_RS01480 PF02556 Preprotein translocase subunit SecB DY252_RS01485 PF03653 Uncharacterised protein family (UPF0093) DY252_RS01490 PF00762 Ferrochelatase DY252_RS01495 PF01208 Uroporphyrinogen decarboxylase (URO-D) DY252_RS01500 PF03618 Kinase/pyrophosphorylase DY252_RS01505 PF02545 Maf-like protein DY252_RS01510 PF08501 Shikimate dehydrogenase substrate binding domain DY252_RS01510 PF01488 Shikimate / quinate 5-dehydrogenase DY252_RS01510 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DY252_RS01515 PF01121 Dephospho-CoA kinase DY252_RS01520 PF00929 Exonuclease DY252_RS01530 PF01713 Smr domain DY252_RS01540 PF07497 Rho termination factor, RNA-binding domain DY252_RS01540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DY252_RS01540 PF07498 Rho termination factor, N-terminal domain DY252_RS01555 PF02824 TGS domain DY252_RS01555 PF04607 Region found in RelA / SpoT proteins DY252_RS01555 PF13291 ACT domain DY252_RS01565 PF00107 Zinc-binding dehydrogenase DY252_RS01565 PF08240 Alcohol dehydrogenase GroES-like domain DY252_RS01580 PF03190 Protein of unknown function, DUF255 DY252_RS01595 PF01926 50S ribosome-binding GTPase DY252_RS01595 PF10396 GTP-binding protein TrmE N-terminus DY252_RS01595 PF12631 MnmE helical domain DY252_RS01600 PF01134 Glucose inhibited division protein A DY252_RS01600 PF13932 GidA associated domain DY252_RS01605 PF02527 rRNA small subunit methyltransferase G DY252_RS01610 PF13614 AAA domain DY252_RS01615 PF17762 HTH domain found in ParB protein DY252_RS01615 PF02195 ParB-like nuclease domain DY252_RS01640 PF13609 Gram-negative porin DY252_RS01655 PF02581 Thiamine monophosphate synthase DY252_RS01665 PF00486 Transcriptional regulatory protein, C terminal DY252_RS01665 PF00072 Response regulator receiver domain DY252_RS01670 PF00925 GTP cyclohydrolase II DY252_RS01690 PF00579 tRNA synthetases class I (W and Y) DY252_RS01695 PF03023 Lipid II flippase MurJ DY252_RS01700 PF01966 HD domain DY252_RS01700 PF01909 Nucleotidyltransferase domain DY252_RS01700 PF08335 GlnD PII-uridylyltransferase DY252_RS01705 PF01624 MutS domain I DY252_RS01705 PF05190 MutS family domain IV DY252_RS01705 PF05188 MutS domain II DY252_RS01705 PF00488 MutS domain V DY252_RS01705 PF05192 MutS domain III DY252_RS01715 PF03949 Malic enzyme, NAD binding domain DY252_RS01715 PF01515 Phosphate acetyl/butaryl transferase DY252_RS01715 PF00390 Malic enzyme, N-terminal domain DY252_RS01730 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DY252_RS01735 PF01106 NifU-like domain DY252_RS01750 PF01661 Macro domain DY252_RS01755 PF00719 Inorganic pyrophosphatase DY252_RS01760 PF00535 Glycosyl transferase family 2 DY252_RS01765 PF16363 GDP-mannose 4,6 dehydratase DY252_RS01770 PF03466 LysR substrate binding domain DY252_RS01770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS01795 PF02146 Sir2 family DY252_RS01800 PF01025 GrpE DY252_RS01805 PF01628 HrcA protein C terminal domain DY252_RS01810 PF01138 3' exoribonuclease family, domain 1 DY252_RS01810 PF03725 3' exoribonuclease family, domain 2 DY252_RS01815 PF01725 Ham1 family DY252_RS01820 PF04055 Radical SAM superfamily DY252_RS01820 PF06969 HemN C-terminal domain DY252_RS01830 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DY252_RS01830 PF00535 Glycosyl transferase family 2 DY252_RS01840 PF03062 MBOAT, membrane-bound O-acyltransferase family DY252_RS01855 PF00571 CBS domain DY252_RS01855 PF01380 SIS domain DY252_RS01870 PF00005 ABC transporter DY252_RS01875 PF00309 Sigma-54 factor, Activator interacting domain (AID) DY252_RS01875 PF04552 Sigma-54, DNA binding domain DY252_RS01875 PF04963 Sigma-54 factor, core binding domain DY252_RS01880 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DY252_RS01880 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DY252_RS01885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DY252_RS01890 PF07690 Major Facilitator Superfamily DY252_RS01895 PF03144 Elongation factor Tu domain 2 DY252_RS01895 PF00009 Elongation factor Tu GTP binding domain DY252_RS01895 PF00679 Elongation factor G C-terminus DY252_RS01900 PF00294 pfkB family carbohydrate kinase DY252_RS01925 PF02021 Uncharacterised protein family UPF0102 DY252_RS01930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_RS01940 PF10576 Iron-sulfur binding domain of endonuclease III DY252_RS01940 PF00730 HhH-GPD superfamily base excision DNA repair protein DY252_RS01940 PF00633 Helix-hairpin-helix motif DY252_RS01950 PF00012 Hsp70 protein DY252_RS01955 PF00226 DnaJ domain DY252_RS01955 PF01556 DnaJ C terminal domain DY252_RS01955 PF00684 DnaJ central domain DY252_RS01960 PF05173 Dihydrodipicolinate reductase, C-terminus DY252_RS01960 PF01113 Dihydrodipicolinate reductase, N-terminus DY252_RS01965 PF01367 5'-3' exonuclease, C-terminal SAM fold DY252_RS01965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DY252_RS01965 PF01612 3'-5' exonuclease DY252_RS01965 PF00476 DNA polymerase family A DY252_RS01985 PF08245 Mur ligase middle domain DY252_RS01985 PF02875 Mur ligase family, glutamate ligase domain DY252_RS01990 PF17848 Acetyl-coA carboxylase zinc finger domain DY252_RS01990 PF01039 Carboxyl transferase domain DY252_RS01995 PF00290 Tryptophan synthase alpha chain DY252_RS02000 PF00291 Pyridoxal-phosphate dependent enzyme DY252_RS02010 PF00005 ABC transporter DY252_RS02020 PF12146 Serine aminopeptidase, S33 DY252_RS02040 PF01048 Phosphorylase superfamily DY252_RS02045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DY252_RS02045 PF00205 Thiamine pyrophosphate enzyme, central domain DY252_RS02045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DY252_RS02060 PF02397 Bacterial sugar transferase DY252_RS02065 PF00072 Response regulator receiver domain DY252_RS02065 PF00486 Transcriptional regulatory protein, C terminal DY252_RS02070 PF01590 GAF domain DY252_RS02070 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS02070 PF00360 Phytochrome region DY252_RS02070 PF00563 EAL domain DY252_RS02080 PF00072 Response regulator receiver domain DY252_RS02080 PF08448 PAS fold DY252_RS02080 PF13426 PAS domain DY252_RS02080 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS02080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS02085 PF02954 Bacterial regulatory protein, Fis family DY252_RS02085 PF00072 Response regulator receiver domain DY252_RS02085 PF00158 Sigma-54 interaction domain DY252_RS02090 PF00196 Bacterial regulatory proteins, luxR family DY252_RS02090 PF00072 Response regulator receiver domain DY252_RS02100 PF17954 Quercetinase C-terminal cupin domain DY252_RS02100 PF02678 Pirin DY252_RS02105 PF03466 LysR substrate binding domain DY252_RS02105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS02115 PF03466 LysR substrate binding domain DY252_RS02115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS02130 PF08402 TOBE domain DY252_RS02130 PF00005 ABC transporter DY252_RS02140 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS02145 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS02150 PF01177 Asp/Glu/Hydantoin racemase DY252_RS02155 PF00392 Bacterial regulatory proteins, gntR family DY252_RS02155 PF07729 FCD domain DY252_RS02160 PF01925 Sulfite exporter TauE/SafE DY252_RS02175 PF01970 Tripartite tricarboxylate transporter TctA family DY252_RS02195 PF04349 Periplasmic glucan biosynthesis protein, MdoG DY252_RS02200 PF00535 Glycosyl transferase family 2 DY252_RS02210 PF00106 short chain dehydrogenase DY252_RS02215 PF00378 Enoyl-CoA hydratase/isomerase DY252_RS02225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_RS02225 PF12806 Acetyl-CoA dehydrogenase C-terminal like DY252_RS02225 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_RS02225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_RS02230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DY252_RS02230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DY252_RS02230 PF00378 Enoyl-CoA hydratase/isomerase DY252_RS02240 PF00376 MerR family regulatory protein DY252_RS02240 PF09278 MerR, DNA binding DY252_RS02245 PF13193 AMP-binding enzyme C-terminal domain DY252_RS02245 PF00501 AMP-binding enzyme DY252_RS02265 PF05433 Glycine zipper 2TM domain DY252_RS02265 PF16998 17 kDa outer membrane surface antigen DY252_RS02275 PF01979 Amidohydrolase family DY252_RS02285 PF07690 Major Facilitator Superfamily DY252_RS02295 PF00593 TonB dependent receptor DY252_RS02295 PF07715 TonB-dependent Receptor Plug Domain DY252_RS02300 PF05171 Haemin-degrading HemS.ChuX domain DY252_RS02305 PF01497 Periplasmic binding protein DY252_RS02310 PF01032 FecCD transport family DY252_RS02315 PF00005 ABC transporter DY252_RS02320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS02320 PF03466 LysR substrate binding domain DY252_RS02325 PF01266 FAD dependent oxidoreductase DY252_RS02330 PF00202 Aminotransferase class-III DY252_RS02335 PF00171 Aldehyde dehydrogenase family DY252_RS02340 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DY252_RS02340 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DY252_RS02350 PF02581 Thiamine monophosphate synthase DY252_RS02355 PF02110 Hydroxyethylthiazole kinase family DY252_RS02360 PF16921 Tex protein YqgF-like domain DY252_RS02360 PF09371 Tex-like protein N-terminal domain DY252_RS02360 PF17674 HHH domain DY252_RS02360 PF00575 S1 RNA binding domain DY252_RS02365 PF07896 Protein of unknown function (DUF1674) DY252_RS02370 PF00834 Ribulose-phosphate 3 epimerase family DY252_RS02375 PF01189 16S rRNA methyltransferase RsmB/F DY252_RS02375 PF01029 NusB family DY252_RS02380 PF00953 Glycosyl transferase family 4 DY252_RS02385 PF02719 Polysaccharide biosynthesis protein DY252_RS02390 PF07063 Domain of unknown function (DUF1338) DY252_RS02395 PF01808 AICARFT/IMPCHase bienzyme DY252_RS02395 PF02142 MGS-like domain DY252_RS02415 PF03900 Porphobilinogen deaminase, C-terminal domain DY252_RS02415 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DY252_RS02420 PF00814 Glycoprotease family DY252_RS02425 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DY252_RS02425 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DY252_RS02430 PF03795 YCII-related domain DY252_RS02450 PF13439 Glycosyltransferase Family 4 DY252_RS02450 PF00534 Glycosyl transferases group 1 DY252_RS02460 PF05198 Translation initiation factor IF-3, N-terminal domain DY252_RS02460 PF00707 Translation initiation factor IF-3, C-terminal domain DY252_RS02465 PF00486 Transcriptional regulatory protein, C terminal DY252_RS02465 PF00072 Response regulator receiver domain DY252_RS02470 PF03547 Membrane transport protein DY252_RS02475 PF01632 Ribosomal protein L35 DY252_RS02480 PF00453 Ribosomal protein L20 DY252_RS02485 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DY252_RS02485 PF01409 tRNA synthetases class II core domain (F) DY252_RS02490 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DY252_RS02490 PF03147 Ferredoxin-fold anticodon binding domain DY252_RS02490 PF03484 tRNA synthetase B5 domain DY252_RS02490 PF01588 Putative tRNA binding domain DY252_RS02490 PF03483 B3/4 domain DY252_RS02500 PF00360 Phytochrome region DY252_RS02500 PF08446 PAS fold DY252_RS02500 PF01590 GAF domain DY252_RS02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS02500 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS02505 PF03144 Elongation factor Tu domain 2 DY252_RS02505 PF06421 GTP-binding protein LepA C-terminus DY252_RS02505 PF00679 Elongation factor G C-terminus DY252_RS02505 PF00009 Elongation factor Tu GTP binding domain DY252_RS02515 PF03928 Haem-degrading DY252_RS02525 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS02530 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DY252_RS02540 PF12804 MobA-like NTP transferase domain DY252_RS02545 PF12705 PD-(D/E)XK nuclease superfamily DY252_RS02550 PF12705 PD-(D/E)XK nuclease superfamily DY252_RS02550 PF00580 UvrD/REP helicase N-terminal domain DY252_RS02550 PF13361 UvrD-like helicase C-terminal domain DY252_RS02555 PF00085 Thioredoxin DY252_RS02560 PF17200 Single Cache domain 2 DY252_RS02560 PF00672 HAMP domain DY252_RS02560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS02565 PF01580 FtsK/SpoIIIE family DY252_RS02565 PF09397 Ftsk gamma domain DY252_RS02565 PF17854 FtsK alpha domain DY252_RS02565 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DY252_RS02575 PF00909 Ammonium Transporter Family DY252_RS02580 PF00909 Ammonium Transporter Family DY252_RS02585 PF00543 Nitrogen regulatory protein P-II DY252_RS02590 PF01494 FAD binding domain DY252_RS02595 PF03922 OmpW family DY252_RS02605 PF03966 Trm112p-like protein DY252_RS02615 PF00085 Thioredoxin DY252_RS02645 PF05088 Bacterial NAD-glutamate dehydrogenase DY252_RS02650 PF00440 Bacterial regulatory proteins, tetR family DY252_RS02655 PF00529 HlyD membrane-fusion protein of T1SS DY252_RS02655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DY252_RS02660 PF00873 AcrB/AcrD/AcrF family DY252_RS02675 PF01435 Peptidase family M48 DY252_RS02685 PF01027 Inhibitor of apoptosis-promoting Bax1 DY252_RS02695 PF13193 AMP-binding enzyme C-terminal domain DY252_RS02695 PF00501 AMP-binding enzyme DY252_RS02705 PF00005 ABC transporter DY252_RS02710 PF13472 GDSL-like Lipase/Acylhydrolase family DY252_RS02725 PF00248 Aldo/keto reductase family DY252_RS02730 PF05726 Pirin C-terminal cupin domain DY252_RS02730 PF02678 Pirin DY252_RS02740 PF14748 Pyrroline-5-carboxylate reductase dimerisation DY252_RS02740 PF03807 NADP oxidoreductase coenzyme F420-dependent DY252_RS02750 PF00892 EamA-like transporter family DY252_RS02755 PF01047 MarR family DY252_RS02810 PF00107 Zinc-binding dehydrogenase DY252_RS02810 PF08240 Alcohol dehydrogenase GroES-like domain DY252_RS02825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS02825 PF03466 LysR substrate binding domain DY252_RS02830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_RS02835 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS02840 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_RS02840 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS02845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_RS02845 PF00005 ABC transporter DY252_RS02865 PF02789 Cytosol aminopeptidase family, N-terminal domain DY252_RS02865 PF00883 Cytosol aminopeptidase family, catalytic domain DY252_RS02875 PF03167 Uracil DNA glycosylase superfamily DY252_RS02880 PF01329 Pterin 4 alpha carbinolamine dehydratase DY252_RS02885 PF00106 short chain dehydrogenase DY252_RS02890 PF00892 EamA-like transporter family DY252_RS02895 PF00892 EamA-like transporter family DY252_RS02900 PF00892 EamA-like transporter family DY252_RS02905 PF01037 Lrp/AsnC ligand binding domain DY252_RS02910 PF02080 TrkA-C domain DY252_RS02910 PF03471 Transporter associated domain DY252_RS02910 PF00999 Sodium/hydrogen exchanger family DY252_RS02925 PF01810 LysE type translocator DY252_RS02935 PF00459 Inositol monophosphatase family DY252_RS02940 PF00459 Inositol monophosphatase family DY252_RS02945 PF00034 Cytochrome c DY252_RS02950 PF02348 Cytidylyltransferase DY252_RS02955 PF01842 ACT domain DY252_RS02955 PF00800 Prephenate dehydratase DY252_RS02960 PF08269 Cache domain DY252_RS02960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS02965 PF00270 DEAD/DEAH box helicase DY252_RS02965 PF00271 Helicase conserved C-terminal domain DY252_RS02980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_RS02980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_RS02980 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_RS02985 PF00108 Thiolase, N-terminal domain DY252_RS02985 PF02803 Thiolase, C-terminal domain DY252_RS03000 PF00484 Carbonic anhydrase DY252_RS03005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_RS03005 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_RS03005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_RS03010 PF07804 HipA-like C-terminal domain DY252_RS03010 PF13657 HipA N-terminal domain DY252_RS03020 PF02954 Bacterial regulatory protein, Fis family DY252_RS03020 PF00158 Sigma-54 interaction domain DY252_RS03025 PF04012 PspA/IM30 family DY252_RS03040 PF13635 Domain of unknown function (DUF4143) DY252_RS03040 PF13173 AAA domain DY252_RS03060 PF03328 HpcH/HpaI aldolase/citrate lyase family DY252_RS03065 PF01575 MaoC like domain DY252_RS03070 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DY252_RS03080 PF00890 FAD binding domain DY252_RS03080 PF02910 Fumarate reductase flavoprotein C-term DY252_RS03085 PF13085 2Fe-2S iron-sulfur cluster binding domain DY252_RS03095 PF04115 Ureidoglycolate lyase DY252_RS03100 PF03561 Allantoicase repeat DY252_RS03105 PF09349 OHCU decarboxylase DY252_RS03105 PF01014 Uricase DY252_RS03115 PF00576 HIUase/Transthyretin family DY252_RS03120 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_RS03120 PF01799 [2Fe-2S] binding domain DY252_RS03125 PF00034 Cytochrome c DY252_RS03125 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DY252_RS03125 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DY252_RS03135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DY252_RS03140 PF00005 ABC transporter DY252_RS03150 PF02653 Branched-chain amino acid transport system / permease component DY252_RS03155 PF02608 ABC transporter substrate-binding protein PnrA-like DY252_RS03175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS03180 PF00850 Histone deacetylase domain DY252_RS03185 PF03466 LysR substrate binding domain DY252_RS03185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS03195 PF16123 Hydroxyacylglutathione hydrolase C-terminus DY252_RS03195 PF00753 Metallo-beta-lactamase superfamily DY252_RS03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS03200 PF03466 LysR substrate binding domain DY252_RS03210 PF02653 Branched-chain amino acid transport system / permease component DY252_RS03220 PF12399 Branched-chain amino acid ATP-binding cassette transporter DY252_RS03220 PF00005 ABC transporter DY252_RS03225 PF00005 ABC transporter DY252_RS03230 PF01774 UreD urease accessory protein DY252_RS03235 PF00547 Urease, gamma subunit DY252_RS03240 PF00699 Urease beta subunit DY252_RS03245 PF01979 Amidohydrolase family DY252_RS03245 PF00449 Urease alpha-subunit, N-terminal domain DY252_RS03250 PF05194 UreE urease accessory protein, C-terminal domain DY252_RS03250 PF02814 UreE urease accessory protein, N-terminal domain DY252_RS03255 PF01730 UreF DY252_RS03260 PF02492 CobW/HypB/UreG, nucleotide-binding domain DY252_RS03275 PF02632 BioY family DY252_RS03280 PF00005 ABC transporter DY252_RS03285 PF02361 Cobalt transport protein DY252_RS03290 PF00756 Putative esterase DY252_RS03295 PF00107 Zinc-binding dehydrogenase DY252_RS03295 PF08240 Alcohol dehydrogenase GroES-like domain DY252_RS03300 PF03466 LysR substrate binding domain DY252_RS03300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS03310 PF00106 short chain dehydrogenase DY252_RS03315 PF00158 Sigma-54 interaction domain DY252_RS03315 PF18024 Helix-turn-helix domain DY252_RS03320 PF01053 Cys/Met metabolism PLP-dependent enzyme DY252_RS03335 PF00571 CBS domain DY252_RS03335 PF01743 Poly A polymerase head domain DY252_RS03340 PF02615 Malate/L-lactate dehydrogenase DY252_RS03345 PF01699 Sodium/calcium exchanger protein DY252_RS03350 PF01914 MarC family integral membrane protein DY252_RS03360 PF01435 Peptidase family M48 DY252_RS03365 PF00664 ABC transporter transmembrane region DY252_RS03365 PF00005 ABC transporter DY252_RS03370 PF00529 HlyD membrane-fusion protein of T1SS DY252_RS03370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DY252_RS03635 PF12708 Pectate lyase superfamily protein DY252_RS03635 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DY252_RS03635 PF13229 Right handed beta helix region DY252_RS03640 PF01207 Dihydrouridine synthase (Dus) DY252_RS03650 PF02310 B12 binding domain DY252_RS03650 PF01642 Methylmalonyl-CoA mutase DY252_RS03655 PF01642 Methylmalonyl-CoA mutase DY252_RS03660 PF00196 Bacterial regulatory proteins, luxR family DY252_RS03660 PF00072 Response regulator receiver domain DY252_RS03665 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DY252_RS03670 PF01037 Lrp/AsnC ligand binding domain DY252_RS03680 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DY252_RS03685 PF08448 PAS fold DY252_RS03685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS03685 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS03685 PF13426 PAS domain DY252_RS03685 PF00072 Response regulator receiver domain DY252_RS03690 PF00158 Sigma-54 interaction domain DY252_RS03690 PF00072 Response regulator receiver domain DY252_RS03695 PF00072 Response regulator receiver domain DY252_RS03695 PF12833 Helix-turn-helix domain DY252_RS03700 PF02954 Bacterial regulatory protein, Fis family DY252_RS03700 PF00072 Response regulator receiver domain DY252_RS03700 PF00158 Sigma-54 interaction domain DY252_RS03715 PF01960 ArgJ family DY252_RS03740 PF01043 SecA preprotein cross-linking domain DY252_RS03740 PF07517 SecA DEAD-like domain DY252_RS03740 PF02810 SEC-C motif DY252_RS03740 PF07516 SecA Wing and Scaffold domain DY252_RS03765 PF00293 NUDIX domain DY252_RS03770 PF00994 Probable molybdopterin binding domain DY252_RS03770 PF18146 Damage-inducible protein CinA KH domain DY252_RS03770 PF02464 Competence-damaged protein DY252_RS03785 PF00881 Nitroreductase family DY252_RS03800 PF00690 Cation transporter/ATPase, N-terminus DY252_RS03800 PF00689 Cation transporting ATPase, C-terminus DY252_RS03820 PF02673 Bacitracin resistance protein BacA DY252_RS03825 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DY252_RS03825 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS03830 PF00310 Glutamine amidotransferases class-II DY252_RS03830 PF04898 Glutamate synthase central domain DY252_RS03830 PF01645 Conserved region in glutamate synthase DY252_RS03830 PF01493 GXGXG motif DY252_RS03845 PF13188 PAS domain DY252_RS03845 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS03845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS03845 PF08448 PAS fold DY252_RS03845 PF00072 Response regulator receiver domain DY252_RS03850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_RS03865 PF01258 Prokaryotic dksA/traR C4-type zinc finger DY252_RS03875 PF13545 Crp-like helix-turn-helix domain DY252_RS03875 PF00027 Cyclic nucleotide-binding domain DY252_RS03880 PF00196 Bacterial regulatory proteins, luxR family DY252_RS03880 PF00072 Response regulator receiver domain DY252_RS03885 PF07730 Histidine kinase DY252_RS03885 PF17200 Single Cache domain 2 DY252_RS03890 PF00289 Biotin carboxylase, N-terminal domain DY252_RS03890 PF02436 Conserved carboxylase domain DY252_RS03890 PF00682 HMGL-like DY252_RS03890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DY252_RS03890 PF00364 Biotin-requiring enzyme DY252_RS03890 PF02785 Biotin carboxylase C-terminal domain DY252_RS03895 PF01565 FAD binding domain DY252_RS03895 PF02913 FAD linked oxidases, C-terminal domain DY252_RS03900 PF01565 FAD binding domain DY252_RS03905 PF02754 Cysteine-rich domain DY252_RS03905 PF13183 4Fe-4S dicluster domain DY252_RS03915 PF12849 PBP superfamily domain DY252_RS03920 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS03925 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS03930 PF00005 ABC transporter DY252_RS03935 PF01895 PhoU domain DY252_RS03940 PF00486 Transcriptional regulatory protein, C terminal DY252_RS03940 PF00072 Response regulator receiver domain DY252_RS03945 PF02254 TrkA-N domain DY252_RS03945 PF00999 Sodium/hydrogen exchanger family DY252_RS03950 PF01699 Sodium/calcium exchanger protein DY252_RS03960 PF02152 Dihydroneopterin aldolase DY252_RS03965 PF01541 GIY-YIG catalytic domain DY252_RS03965 PF12826 Helix-hairpin-helix motif DY252_RS03965 PF08459 UvrC Helix-hairpin-helix N-terminal DY252_RS03965 PF02151 UvrB/uvrC motif DY252_RS03970 PF00860 Permease family DY252_RS03975 PF01066 CDP-alcohol phosphatidyltransferase DY252_RS03980 PF02391 MoaE protein DY252_RS03995 PF07021 Methionine biosynthesis protein MetW DY252_RS03995 PF00561 alpha/beta hydrolase fold DY252_RS04000 PF00561 alpha/beta hydrolase fold DY252_RS04010 PF00155 Aminotransferase class I and II DY252_RS04015 PF02153 Prephenate dehydrogenase DY252_RS04020 PF00892 EamA-like transporter family DY252_RS04035 PF01553 Acyltransferase DY252_RS04050 PF00005 ABC transporter DY252_RS04065 PF04542 Sigma-70 region 2 DY252_RS04065 PF08281 Sigma-70, region 4 DY252_RS04070 PF04773 FecR protein DY252_RS04070 PF16220 Domain of unknown function (DUF4880) DY252_RS04075 PF07715 TonB-dependent Receptor Plug Domain DY252_RS04075 PF00593 TonB dependent receptor DY252_RS04075 PF07660 Secretin and TonB N terminus short domain DY252_RS04085 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DY252_RS04085 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DY252_RS04090 PF14698 Argininosuccinate lyase C-terminal DY252_RS04090 PF00206 Lyase DY252_RS04095 PF08534 Redoxin DY252_RS04100 PF00294 pfkB family carbohydrate kinase DY252_RS04105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DY252_RS04105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DY252_RS04110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DY252_RS04110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DY252_RS04115 PF01012 Electron transfer flavoprotein domain DY252_RS04115 PF00766 Electron transfer flavoprotein FAD-binding domain DY252_RS04120 PF01012 Electron transfer flavoprotein domain DY252_RS04125 PF01923 Cobalamin adenosyltransferase DY252_RS04135 PF01590 GAF domain DY252_RS04135 PF00158 Sigma-54 interaction domain DY252_RS04145 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS04150 PF00005 ABC transporter DY252_RS04155 PF02560 Cyanate lyase C-terminal domain DY252_RS04160 PF02798 Glutathione S-transferase, N-terminal domain DY252_RS04160 PF00043 Glutathione S-transferase, C-terminal domain DY252_RS04165 PF05221 S-adenosyl-L-homocysteine hydrolase DY252_RS04165 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DY252_RS04175 PF12729 Four helix bundle sensory module for signal transduction DY252_RS04175 PF00672 HAMP domain DY252_RS04175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS04180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_RS04180 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_RS04180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_RS04185 PF08240 Alcohol dehydrogenase GroES-like domain DY252_RS04185 PF00107 Zinc-binding dehydrogenase DY252_RS04190 PF02310 B12 binding domain DY252_RS04190 PF01642 Methylmalonyl-CoA mutase DY252_RS04195 PF00440 Bacterial regulatory proteins, tetR family DY252_RS04205 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS04205 PF00563 EAL domain DY252_RS04205 PF03707 Bacterial signalling protein N terminal repeat DY252_RS04210 PF00075 RNase H DY252_RS04215 PF01636 Phosphotransferase enzyme family DY252_RS04220 PF02401 LytB protein DY252_RS04230 PF01571 Aminomethyltransferase folate-binding domain DY252_RS04230 PF08669 Glycine cleavage T-protein C-terminal barrel domain DY252_RS04235 PF01597 Glycine cleavage H-protein DY252_RS04240 PF02347 Glycine cleavage system P-protein DY252_RS04245 PF00266 Aminotransferase class-V DY252_RS04260 PF00462 Glutaredoxin DY252_RS04260 PF08534 Redoxin DY252_RS04265 PF11412 Disulphide bond corrector protein DsbC DY252_RS04265 PF02683 Cytochrome C biogenesis protein transmembrane region DY252_RS04270 PF02622 Uncharacterized ACR, COG1678 DY252_RS04280 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DY252_RS04280 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DY252_RS04285 PF00115 Cytochrome C and Quinol oxidase polypeptide I DY252_RS04290 PF01040 UbiA prenyltransferase family DY252_RS04295 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DY252_RS04300 PF00510 Cytochrome c oxidase subunit III DY252_RS04310 PF02104 SURF1 family DY252_RS04315 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DY252_RS04320 PF13545 Crp-like helix-turn-helix domain DY252_RS04320 PF00027 Cyclic nucleotide-binding domain DY252_RS04330 PF05193 Peptidase M16 inactive domain DY252_RS04330 PF00675 Insulinase (Peptidase family M16) DY252_RS04335 PF00480 ROK family DY252_RS04355 PF00288 GHMP kinases N terminal domain DY252_RS04355 PF08544 GHMP kinases C terminal DY252_RS04365 PF07687 Peptidase dimerisation domain DY252_RS04365 PF01546 Peptidase family M20/M25/M40 DY252_RS04380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS04380 PF03466 LysR substrate binding domain DY252_RS04385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DY252_RS04385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DY252_RS04390 PF00171 Aldehyde dehydrogenase family DY252_RS04400 PF03167 Uracil DNA glycosylase superfamily DY252_RS04405 PF01464 Transglycosylase SLT domain DY252_RS04420 PF03918 Cytochrome C biogenesis protein DY252_RS04425 PF08534 Redoxin DY252_RS04430 PF01578 Cytochrome C assembly protein DY252_RS04430 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DY252_RS04435 PF03100 CcmE DY252_RS04445 PF01578 Cytochrome C assembly protein DY252_RS04450 PF03379 CcmB protein DY252_RS04455 PF00005 ABC transporter DY252_RS04465 PF00209 Sodium:neurotransmitter symporter family DY252_RS04470 PF03707 Bacterial signalling protein N terminal repeat DY252_RS04470 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS04470 PF00563 EAL domain DY252_RS04475 PF00694 Aconitase C-terminal domain DY252_RS04475 PF00330 Aconitase family (aconitate hydratase) DY252_RS04485 PF00005 ABC transporter DY252_RS04485 PF12399 Branched-chain amino acid ATP-binding cassette transporter DY252_RS04490 PF00501 AMP-binding enzyme DY252_RS04495 PF02653 Branched-chain amino acid transport system / permease component DY252_RS04510 PF00005 ABC transporter DY252_RS04515 PF14535 AMP-binding enzyme C-terminal domain DY252_RS04515 PF00501 AMP-binding enzyme DY252_RS04520 PF03773 Predicted permease DY252_RS04530 PF13244 Domain of unknown function (DUF4040) DY252_RS04530 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DY252_RS04530 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DY252_RS04530 PF00361 Proton-conducting membrane transporter DY252_RS04535 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DY252_RS04540 PF00361 Proton-conducting membrane transporter DY252_RS04545 PF01899 Na+/H+ ion antiporter subunit DY252_RS04550 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DY252_RS04555 PF03334 Na+/H+ antiporter subunit DY252_RS04560 PF01351 Ribonuclease HII DY252_RS04570 PF00472 RF-1 domain DY252_RS04575 PF04304 Protein of unknown function (DUF454) DY252_RS04585 PF01590 GAF domain DY252_RS04585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS04585 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS04585 PF00360 Phytochrome region DY252_RS04585 PF08446 PAS fold DY252_RS04595 PF00072 Response regulator receiver domain DY252_RS04595 PF00486 Transcriptional regulatory protein, C terminal DY252_RS04600 PF03707 Bacterial signalling protein N terminal repeat DY252_RS04600 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS04600 PF00563 EAL domain DY252_RS04605 PF11953 Domain of unknown function (DUF3470) DY252_RS04605 PF00037 4Fe-4S binding domain DY252_RS04620 PF01435 Peptidase family M48 DY252_RS04630 PF00561 alpha/beta hydrolase fold DY252_RS04645 PF04209 homogentisate 1,2-dioxygenase DY252_RS04660 PF03466 LysR substrate binding domain DY252_RS04660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS04665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_RS04665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_RS04665 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_RS04670 PF02515 CoA-transferase family III DY252_RS04675 PF00005 ABC transporter DY252_RS04675 PF08402 TOBE domain DY252_RS04680 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS04685 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS04690 PF13416 Bacterial extracellular solute-binding protein DY252_RS04700 PF02558 Ketopantoate reductase PanE/ApbA DY252_RS04700 PF08546 Ketopantoate reductase PanE/ApbA C terminal DY252_RS04710 PF14525 AraC-binding-like domain DY252_RS04710 PF12833 Helix-turn-helix domain DY252_RS04725 PF12833 Helix-turn-helix domain DY252_RS04725 PF02311 AraC-like ligand binding domain DY252_RS04735 PF00149 Calcineurin-like phosphoesterase DY252_RS04735 PF02872 5'-nucleotidase, C-terminal domain DY252_RS04750 PF02310 B12 binding domain DY252_RS04750 PF01642 Methylmalonyl-CoA mutase DY252_RS04770 PF13188 PAS domain DY252_RS04770 PF00563 EAL domain DY252_RS04770 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS04770 PF03707 Bacterial signalling protein N terminal repeat DY252_RS04775 PF01551 Peptidase family M23 DY252_RS04785 PF01209 ubiE/COQ5 methyltransferase family DY252_RS04790 PF01575 MaoC like domain DY252_RS04795 PF06574 FAD synthetase DY252_RS04795 PF01687 Riboflavin kinase DY252_RS04800 PF00133 tRNA synthetases class I (I, L, M and V) DY252_RS04800 PF08264 Anticodon-binding domain of tRNA DY252_RS04805 PF01252 Signal peptidase (SPase) II DY252_RS04815 PF05193 Peptidase M16 inactive domain DY252_RS04815 PF00675 Insulinase (Peptidase family M16) DY252_RS04820 PF05193 Peptidase M16 inactive domain DY252_RS04825 PF01119 DNA mismatch repair protein, C-terminal domain DY252_RS04825 PF08676 MutL C terminal dimerisation domain DY252_RS04840 PF13677 Membrane MotB of proton-channel complex MotA/MotB DY252_RS04840 PF00691 OmpA family DY252_RS04845 PF01618 MotA/TolQ/ExbB proton channel family DY252_RS04855 PF04954 Siderophore-interacting protein DY252_RS04855 PF08021 Siderophore-interacting FAD-binding domain DY252_RS04860 PF00950 ABC 3 transport family DY252_RS04865 PF00950 ABC 3 transport family DY252_RS04870 PF00005 ABC transporter DY252_RS04875 PF01297 Zinc-uptake complex component A periplasmic DY252_RS04880 PF02742 Iron dependent repressor, metal binding and dimerisation domain DY252_RS04880 PF01325 Iron dependent repressor, N-terminal DNA binding domain DY252_RS04890 PF02350 UDP-N-acetylglucosamine 2-epimerase DY252_RS04895 PF08485 Polysaccharide biosynthesis protein C-terminal DY252_RS04895 PF02719 Polysaccharide biosynthesis protein DY252_RS04900 PF00551 Formyl transferase DY252_RS04900 PF02911 Formyl transferase, C-terminal domain DY252_RS04900 PF01370 NAD dependent epimerase/dehydratase family DY252_RS04905 PF00977 Histidine biosynthesis protein DY252_RS04910 PF00117 Glutamine amidotransferase class-I DY252_RS04930 PF00733 Asparagine synthase DY252_RS04930 PF13537 Glutamine amidotransferase domain DY252_RS04935 PF13439 Glycosyltransferase Family 4 DY252_RS04935 PF00534 Glycosyl transferases group 1 DY252_RS04960 PF00202 Aminotransferase class-III DY252_RS04970 PF02719 Polysaccharide biosynthesis protein DY252_RS04975 PF08666 SAF domain DY252_RS04975 PF03102 NeuB family DY252_RS04980 PF00664 ABC transporter transmembrane region DY252_RS04980 PF00005 ABC transporter DY252_RS04990 PF00829 Ribosomal prokaryotic L21 protein DY252_RS04995 PF01016 Ribosomal L27 protein DY252_RS05000 PF01018 GTP1/OBG DY252_RS05000 PF01926 50S ribosome-binding GTPase DY252_RS05005 PF01472 PUA domain DY252_RS05005 PF00696 Amino acid kinase family DY252_RS05010 PF01381 Helix-turn-helix DY252_RS05020 PF07879 PHB/PHA accumulation regulator DNA-binding domain DY252_RS05020 PF05233 PHB accumulation regulatory domain DY252_RS05030 PF00561 alpha/beta hydrolase fold DY252_RS05040 PF01037 Lrp/AsnC ligand binding domain DY252_RS05050 PF07731 Multicopper oxidase DY252_RS05050 PF07732 Multicopper oxidase DY252_RS05050 PF00394 Multicopper oxidase DY252_RS05060 PF00108 Thiolase, N-terminal domain DY252_RS05060 PF02803 Thiolase, C-terminal domain DY252_RS05075 PF03466 LysR substrate binding domain DY252_RS05075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS05085 PF00005 ABC transporter DY252_RS05090 PF02653 Branched-chain amino acid transport system / permease component DY252_RS05095 PF13407 Periplasmic binding protein domain DY252_RS05105 PF00753 Metallo-beta-lactamase superfamily DY252_RS05105 PF16123 Hydroxyacylglutathione hydrolase C-terminus DY252_RS05120 PF02167 Cytochrome C1 family DY252_RS05125 PF00033 Cytochrome b/b6/petB DY252_RS05125 PF00032 Cytochrome b(C-terminal)/b6/petD DY252_RS05130 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DY252_RS05130 PF00355 Rieske [2Fe-2S] domain DY252_RS05135 PF00588 SpoU rRNA Methylase family DY252_RS05140 PF01218 Coproporphyrinogen III oxidase DY252_RS05145 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DY252_RS05150 PF09386 Antitoxin ParD DY252_RS05155 PF00491 Arginase family DY252_RS05165 PF03466 LysR substrate binding domain DY252_RS05165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS05170 PF12411 Choline sulfatase enzyme C terminal DY252_RS05170 PF00884 Sulfatase DY252_RS05175 PF02028 BCCT, betaine/carnitine/choline family transporter DY252_RS05180 PF01965 DJ-1/PfpI family DY252_RS05190 PF01063 Amino-transferase class IV DY252_RS05195 PF12802 MarR family DY252_RS05200 PF00486 Transcriptional regulatory protein, C terminal DY252_RS05200 PF00072 Response regulator receiver domain DY252_RS05205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS05205 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS05205 PF00672 HAMP domain DY252_RS05215 PF00175 Oxidoreductase NAD-binding domain DY252_RS05215 PF00970 Oxidoreductase FAD-binding domain DY252_RS05220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS05220 PF08447 PAS fold DY252_RS05220 PF13426 PAS domain DY252_RS05225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS05225 PF08447 PAS fold DY252_RS05225 PF13426 PAS domain DY252_RS05230 PF01588 Putative tRNA binding domain DY252_RS05240 PF00440 Bacterial regulatory proteins, tetR family DY252_RS05240 PF13977 BetI-type transcriptional repressor, C-terminal DY252_RS05245 PF14748 Pyrroline-5-carboxylate reductase dimerisation DY252_RS05245 PF03807 NADP oxidoreductase coenzyme F420-dependent DY252_RS05260 PF01370 NAD dependent epimerase/dehydratase family DY252_RS05265 PF01790 Prolipoprotein diacylglyceryl transferase DY252_RS05275 PF02578 Multi-copper polyphenol oxidoreductase laccase DY252_RS05285 PF14572 Phosphoribosyl synthetase-associated domain DY252_RS05285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DY252_RS05290 PF14693 Ribosomal protein TL5, C-terminal domain DY252_RS05290 PF01386 Ribosomal L25p family DY252_RS05295 PF01195 Peptidyl-tRNA hydrolase DY252_RS05300 PF01926 50S ribosome-binding GTPase DY252_RS05300 PF06071 Protein of unknown function (DUF933) DY252_RS05305 PF00958 GMP synthase C terminal domain DY252_RS05305 PF00117 Glutamine amidotransferase class-I DY252_RS05310 PF00005 ABC transporter DY252_RS05310 PF10649 Protein of unknown function (DUF2478) DY252_RS05310 PF03459 TOBE domain DY252_RS05315 PF08240 Alcohol dehydrogenase GroES-like domain DY252_RS05315 PF00107 Zinc-binding dehydrogenase DY252_RS05325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS05325 PF03466 LysR substrate binding domain DY252_RS05330 PF00578 AhpC/TSA family DY252_RS05335 PF02627 Carboxymuconolactone decarboxylase family DY252_RS05340 PF01970 Tripartite tricarboxylate transporter TctA family DY252_RS05355 PF00486 Transcriptional regulatory protein, C terminal DY252_RS05355 PF00072 Response regulator receiver domain DY252_RS05360 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS05360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS05360 PF00672 HAMP domain DY252_RS05375 PF00155 Aminotransferase class I and II DY252_RS05380 PF04851 Type III restriction enzyme, res subunit DY252_RS05380 PF02151 UvrB/uvrC motif DY252_RS05380 PF12344 Ultra-violet resistance protein B DY252_RS05380 PF00271 Helicase conserved C-terminal domain DY252_RS05380 PF17757 UvrB interaction domain DY252_RS05385 PF00174 Oxidoreductase molybdopterin binding domain DY252_RS05390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS05390 PF03466 LysR substrate binding domain DY252_RS05395 PF07286 Protein of unknown function (DUF1445) DY252_RS05410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS05420 PF01425 Amidase DY252_RS05425 PF00175 Oxidoreductase NAD-binding domain DY252_RS05425 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_RS05440 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS05445 PF00210 Ferritin-like domain DY252_RS05450 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_RS05450 PF00672 HAMP domain DY252_RS05450 PF02743 Cache domain DY252_RS05455 PF03466 LysR substrate binding domain DY252_RS05455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS05460 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS05465 PF01037 Lrp/AsnC ligand binding domain DY252_RS05470 PF01435 Peptidase family M48 DY252_RS05485 PF01272 Transcription elongation factor, GreA/GreB, C-term DY252_RS05485 PF03449 Transcription elongation factor, N-terminal DY252_RS05490 PF02142 MGS-like domain DY252_RS05490 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DY252_RS05490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DY252_RS05495 PF00117 Glutamine amidotransferase class-I DY252_RS05495 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DY252_RS05500 PF09424 Yqey-like protein DY252_RS05505 PF10410 DnaB-helicase binding domain of primase DY252_RS05505 PF08278 DNA primase DnaG DnaB-binding DY252_RS05505 PF13662 Toprim domain DY252_RS05505 PF01807 CHC2 zinc finger DY252_RS05505 PF08275 DNA primase catalytic core, N-terminal domain DY252_RS05510 PF04539 Sigma-70 region 3 DY252_RS05510 PF04546 Sigma-70, non-essential region DY252_RS05510 PF03979 Sigma-70 factor, region 1.1 DY252_RS05510 PF00140 Sigma-70 factor, region 1.2 DY252_RS05510 PF04545 Sigma-70, region 4 DY252_RS05510 PF04542 Sigma-70 region 2 DY252_RS05585 PF10548 P22AR C-terminal domain DY252_RS05585 PF08346 AntA/AntB antirepressor DY252_RS05775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DY252_RS05775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DY252_RS05780 PF13419 Haloacid dehalogenase-like hydrolase DY252_RS05785 PF03459 TOBE domain DY252_RS05785 PF17912 MalK OB fold domain DY252_RS05785 PF00005 ABC transporter DY252_RS05790 PF00107 Zinc-binding dehydrogenase DY252_RS05790 PF08240 Alcohol dehydrogenase GroES-like domain DY252_RS05800 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS05805 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS05815 PF04198 Putative sugar-binding domain DY252_RS05825 PF00106 short chain dehydrogenase DY252_RS05830 PF03459 TOBE domain DY252_RS05830 PF10649 Protein of unknown function (DUF2478) DY252_RS05830 PF00005 ABC transporter DY252_RS05835 PF00484 Carbonic anhydrase DY252_RS05840 PF09312 SurA N-terminal domain DY252_RS05840 PF00639 PPIC-type PPIASE domain DY252_RS05845 PF02665 Nitrate reductase gamma subunit DY252_RS05850 PF02613 Nitrate reductase delta subunit DY252_RS05855 PF14711 Respiratory nitrate reductase beta C-terminal DY252_RS05855 PF13247 4Fe-4S dicluster domain DY252_RS05860 PF14710 Respiratory nitrate reductase alpha N-terminal DY252_RS05860 PF00384 Molybdopterin oxidoreductase DY252_RS05860 PF01568 Molydopterin dinucleotide binding domain DY252_RS05865 PF07690 Major Facilitator Superfamily DY252_RS05875 PF02627 Carboxymuconolactone decarboxylase family DY252_RS05885 PF01136 Peptidase family U32 DY252_RS05895 PF04405 Domain of Unknown function (DUF542) DY252_RS05895 PF01814 Hemerythrin HHE cation binding domain DY252_RS05905 PF13545 Crp-like helix-turn-helix domain DY252_RS05905 PF00027 Cyclic nucleotide-binding domain DY252_RS05915 PF05573 NosL DY252_RS05920 PF12679 ABC-2 family transporter protein DY252_RS05925 PF00005 ABC transporter DY252_RS05930 PF05048 Periplasmic copper-binding protein (NosD) DY252_RS05935 PF13473 Cupredoxin-like domain DY252_RS05935 PF18793 Nitrous oxide reductase propeller repeat 2 DY252_RS05935 PF18764 Nitrous oxide reductase propeller repeat DY252_RS05940 PF04205 FMN-binding domain DY252_RS05940 PF12801 4Fe-4S binding domain DY252_RS05950 PF00356 Bacterial regulatory proteins, lacI family DY252_RS05965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DY252_RS05965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DY252_RS05970 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DY252_RS05975 PF00005 ABC transporter DY252_RS05980 PF02653 Branched-chain amino acid transport system / permease component DY252_RS05985 PF00005 ABC transporter DY252_RS05990 PF02653 Branched-chain amino acid transport system / permease component DY252_RS06025 PF00027 Cyclic nucleotide-binding domain DY252_RS06025 PF13545 Crp-like helix-turn-helix domain DY252_RS06040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DY252_RS06040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DY252_RS06050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DY252_RS06050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DY252_RS06060 PF02653 Branched-chain amino acid transport system / permease component DY252_RS06065 PF00005 ABC transporter DY252_RS06070 PF00294 pfkB family carbohydrate kinase DY252_RS06075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DY252_RS06075 PF00205 Thiamine pyrophosphate enzyme, central domain DY252_RS06075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DY252_RS06080 PF01261 Xylose isomerase-like TIM barrel DY252_RS06085 PF04962 KduI/IolB family DY252_RS06090 PF14824 Sirohaem biosynthesis protein central DY252_RS06090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_RS06090 PF10414 Sirohaem synthase dimerisation region DY252_RS06095 PF01568 Molydopterin dinucleotide binding domain DY252_RS06095 PF00384 Molybdopterin oxidoreductase DY252_RS06095 PF04324 BFD-like [2Fe-2S] binding domain DY252_RS06095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DY252_RS06100 PF00355 Rieske [2Fe-2S] domain DY252_RS06105 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS06105 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DY252_RS06105 PF04324 BFD-like [2Fe-2S] binding domain DY252_RS06105 PF18267 Rubredoxin NAD+ reductase C-terminal domain DY252_RS06105 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DY252_RS06115 PF07690 Major Facilitator Superfamily DY252_RS06120 PF00072 Response regulator receiver domain DY252_RS06120 PF03861 ANTAR domain DY252_RS06125 PF00005 ABC transporter DY252_RS06135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DY252_RS06140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS06140 PF03466 LysR substrate binding domain DY252_RS06145 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DY252_RS06145 PF00355 Rieske [2Fe-2S] domain DY252_RS06150 PF00970 Oxidoreductase FAD-binding domain DY252_RS06150 PF00175 Oxidoreductase NAD-binding domain DY252_RS06150 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_RS06155 PF13358 DDE superfamily endonuclease DY252_RS06160 PF12833 Helix-turn-helix domain DY252_RS06165 PF01266 FAD dependent oxidoreductase DY252_RS06170 PF04267 Sarcosine oxidase, delta subunit family DY252_RS06175 PF17806 Sarcosine oxidase A3 domain DY252_RS06175 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS06175 PF01571 Aminomethyltransferase folate-binding domain DY252_RS06175 PF08669 Glycine cleavage T-protein C-terminal barrel domain DY252_RS06185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_RS06185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_RS06195 PF03459 TOBE domain DY252_RS06195 PF00005 ABC transporter DY252_RS06200 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS06215 PF00929 Exonuclease DY252_RS06220 PF00571 CBS domain DY252_RS06220 PF01380 SIS domain DY252_RS06225 PF00474 Sodium:solute symporter family DY252_RS06235 PF12848 ABC transporter DY252_RS06235 PF00005 ABC transporter DY252_RS06245 PF04333 MlaA lipoprotein DY252_RS06250 PF01209 ubiE/COQ5 methyltransferase family DY252_RS06255 PF02219 Methylenetetrahydrofolate reductase DY252_RS06260 PF02607 B12 binding domain DY252_RS06260 PF02965 Vitamin B12 dependent methionine synthase, activation domain DY252_RS06260 PF00809 Pterin binding enzyme DY252_RS06260 PF02574 Homocysteine S-methyltransferase DY252_RS06260 PF02310 B12 binding domain DY252_RS06265 PF02607 B12 binding domain DY252_RS06265 PF02310 B12 binding domain DY252_RS06265 PF00809 Pterin binding enzyme DY252_RS06265 PF02574 Homocysteine S-methyltransferase DY252_RS06265 PF02965 Vitamin B12 dependent methionine synthase, activation domain DY252_RS06270 PF07690 Major Facilitator Superfamily DY252_RS06275 PF00654 Voltage gated chloride channel DY252_RS06285 PF02350 UDP-N-acetylglucosamine 2-epimerase DY252_RS06290 PF00580 UvrD/REP helicase N-terminal domain DY252_RS06290 PF13361 UvrD-like helicase C-terminal domain DY252_RS06305 PF00072 Response regulator receiver domain DY252_RS06310 PF00072 Response regulator receiver domain DY252_RS06310 PF13188 PAS domain DY252_RS06310 PF08448 PAS fold DY252_RS06310 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS06325 PF00557 Metallopeptidase family M24 DY252_RS06325 PF01321 Creatinase/Prolidase N-terminal domain DY252_RS06330 PF00248 Aldo/keto reductase family DY252_RS06335 PF03466 LysR substrate binding domain DY252_RS06335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS06340 PF00892 EamA-like transporter family DY252_RS06355 PF12826 Helix-hairpin-helix motif DY252_RS06355 PF00533 BRCA1 C Terminus (BRCT) domain DY252_RS06355 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DY252_RS06355 PF01653 NAD-dependent DNA ligase adenylation domain DY252_RS06355 PF03120 NAD-dependent DNA ligase OB-fold domain DY252_RS06360 PF02463 RecF/RecN/SMC N terminal domain DY252_RS06365 PF13525 Outer membrane lipoprotein DY252_RS06370 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DY252_RS06375 PF12327 FtsZ family, C-terminal domain DY252_RS06375 PF00091 Tubulin/FtsZ family, GTPase domain DY252_RS06380 PF02491 SHS2 domain inserted in FTSA DY252_RS06385 PF08478 POTRA domain, FtsQ-type DY252_RS06385 PF03799 Cell division protein FtsQ DY252_RS06390 PF07478 D-ala D-ala ligase C-terminus DY252_RS06390 PF01820 D-ala D-ala ligase N-terminus DY252_RS06395 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DY252_RS06395 PF01565 FAD binding domain DY252_RS06400 PF08245 Mur ligase middle domain DY252_RS06400 PF02875 Mur ligase family, glutamate ligase domain DY252_RS06400 PF01225 Mur ligase family, catalytic domain DY252_RS06405 PF03033 Glycosyltransferase family 28 N-terminal domain DY252_RS06405 PF04101 Glycosyltransferase family 28 C-terminal domain DY252_RS06410 PF01098 Cell cycle protein DY252_RS06415 PF08245 Mur ligase middle domain DY252_RS06420 PF00953 Glycosyl transferase family 4 DY252_RS06425 PF08245 Mur ligase middle domain DY252_RS06425 PF01225 Mur ligase family, catalytic domain DY252_RS06425 PF02875 Mur ligase family, glutamate ligase domain DY252_RS06430 PF08245 Mur ligase middle domain DY252_RS06430 PF01225 Mur ligase family, catalytic domain DY252_RS06430 PF02875 Mur ligase family, glutamate ligase domain DY252_RS06435 PF03717 Penicillin-binding Protein dimerisation domain DY252_RS06435 PF00905 Penicillin binding protein transpeptidase domain DY252_RS06435 PF03793 PASTA domain DY252_RS06445 PF01795 MraW methylase family DY252_RS06450 PF02381 MraZ protein, putative antitoxin-like DY252_RS06460 PF01544 CorA-like Mg2+ transporter protein DY252_RS06465 PF00857 Isochorismatase family DY252_RS06480 PF01510 N-acetylmuramoyl-L-alanine amidase DY252_RS06490 PF00005 ABC transporter DY252_RS06490 PF16326 ABC transporter C-terminal domain DY252_RS06495 PF00226 DnaJ domain DY252_RS06495 PF05099 Tellurite resistance protein TerB DY252_RS06500 PF00672 HAMP domain DY252_RS06500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS06505 PF08269 Cache domain DY252_RS06505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS06530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS06535 PF05378 Hydantoinase/oxoprolinase N-terminal region DY252_RS06535 PF01968 Hydantoinase/oxoprolinase DY252_RS06540 PF01645 Conserved region in glutamate synthase DY252_RS06545 PF09857 Putative toxin of bacterial toxin-antitoxin pair DY252_RS06550 PF00583 Acetyltransferase (GNAT) family DY252_RS06555 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS06565 PF02913 FAD linked oxidases, C-terminal domain DY252_RS06565 PF01565 FAD binding domain DY252_RS06585 PF05170 AsmA family DY252_RS06590 PF01384 Phosphate transporter family DY252_RS06595 PF02592 Putative vitamin uptake transporter DY252_RS06600 PF02547 Queuosine biosynthesis protein DY252_RS06605 PF01702 Queuine tRNA-ribosyltransferase DY252_RS06610 PF14489 QueF-like protein DY252_RS06615 PF08331 Domain of unknown function (DUF1730) DY252_RS06620 PF00149 Calcineurin-like phosphoesterase DY252_RS06630 PF00733 Asparagine synthase DY252_RS06630 PF13537 Glutamine amidotransferase domain DY252_RS06635 PF00672 HAMP domain DY252_RS06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS06635 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS06635 PF01627 Hpt domain DY252_RS06635 PF00072 Response regulator receiver domain DY252_RS06635 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DY252_RS06645 PF00202 Aminotransferase class-III DY252_RS06650 PF05853 beta-keto acid cleavage enzyme DY252_RS06665 PF00582 Universal stress protein family DY252_RS06675 PF03781 Sulfatase-modifying factor enzyme 1 DY252_RS06685 PF00034 Cytochrome c DY252_RS06695 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS06705 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS06720 PF00348 Polyprenyl synthetase DY252_RS06730 PF13847 Methyltransferase domain DY252_RS06730 PF17827 PrmC N-terminal domain DY252_RS06740 PF02091 Glycyl-tRNA synthetase alpha subunit DY252_RS06745 PF02092 Glycyl-tRNA synthetase beta subunit DY252_RS06745 PF05746 DALR anticodon binding domain DY252_RS06750 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DY252_RS06750 PF02896 PEP-utilising enzyme, TIM barrel domain DY252_RS06750 PF00391 PEP-utilising enzyme, mobile domain DY252_RS06760 PF01571 Aminomethyltransferase folate-binding domain DY252_RS06775 PF00733 Asparagine synthase DY252_RS06775 PF13537 Glutamine amidotransferase domain DY252_RS06785 PF06803 Protein of unknown function (DUF1232) DY252_RS06790 PF00107 Zinc-binding dehydrogenase DY252_RS06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS06795 PF08447 PAS fold DY252_RS06795 PF08448 PAS fold DY252_RS06800 PF00196 Bacterial regulatory proteins, luxR family DY252_RS06800 PF00072 Response regulator receiver domain DY252_RS06810 PF01370 NAD dependent epimerase/dehydratase family DY252_RS06825 PF00692 dUTPase DY252_RS06830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DY252_RS06835 PF01634 ATP phosphoribosyltransferase DY252_RS06840 PF00815 Histidinol dehydrogenase DY252_RS06845 PF06793 Uncharacterised protein family (UPF0262) DY252_RS06850 PF01451 Low molecular weight phosphotyrosine protein phosphatase DY252_RS06855 PF00583 Acetyltransferase (GNAT) family DY252_RS06860 PF01176 Translation initiation factor 1A / IF-1 DY252_RS06865 PF02545 Maf-like protein DY252_RS06870 PF10150 Ribonuclease E/G family DY252_RS06870 PF00575 S1 RNA binding domain DY252_RS06870 PF12111 Polyribonucleotide phosphorylase C terminal DY252_RS06875 PF03884 DNA gyrase inhibitor YacG DY252_RS06895 PF00875 DNA photolyase DY252_RS06895 PF03441 FAD binding domain of DNA photolyase DY252_RS06900 PF00392 Bacterial regulatory proteins, gntR family DY252_RS06900 PF00155 Aminotransferase class I and II DY252_RS06910 PF04227 Indigoidine synthase A like protein DY252_RS06915 PF07690 Major Facilitator Superfamily DY252_RS06920 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DY252_RS06920 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DY252_RS06925 PF10369 Small subunit of acetolactate synthase DY252_RS06930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DY252_RS06930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DY252_RS06930 PF00205 Thiamine pyrophosphate enzyme, central domain DY252_RS06945 PF13180 PDZ domain DY252_RS06960 PF01145 SPFH domain / Band 7 family DY252_RS06960 PF12221 Bacterial membrane protein N terminal DY252_RS06965 PF10609 NUBPL iron-transfer P-loop NTPase DY252_RS06975 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DY252_RS06975 PF02769 AIR synthase related protein, C-terminal domain DY252_RS06975 PF00586 AIR synthase related protein, N-terminal domain DY252_RS06985 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DY252_RS06990 PF01259 SAICAR synthetase DY252_RS07005 PF00072 Response regulator receiver domain DY252_RS07005 PF00196 Bacterial regulatory proteins, luxR family DY252_RS07010 PF00117 Glutamine amidotransferase class-I DY252_RS07010 PF06418 CTP synthase N-terminus DY252_RS07015 PF00892 EamA-like transporter family DY252_RS07020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS07020 PF03466 LysR substrate binding domain DY252_RS07025 PF01161 Phosphatidylethanolamine-binding protein DY252_RS07030 PF00206 Lyase DY252_RS07030 PF10397 Adenylosuccinate lyase C-terminus DY252_RS07040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_RS07040 PF00005 ABC transporter DY252_RS07045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_RS07045 PF00005 ABC transporter DY252_RS07050 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS07050 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_RS07055 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS07060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_RS07075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DY252_RS07080 PF04002 RadC-like JAB domain DY252_RS07085 PF00557 Metallopeptidase family M24 DY252_RS07090 PF17746 SfsA N-terminal OB domain DY252_RS07090 PF03749 Sugar fermentation stimulation protein RE domain DY252_RS07100 PF08241 Methyltransferase domain DY252_RS07105 PF00970 Oxidoreductase FAD-binding domain DY252_RS07105 PF00042 Globin DY252_RS07105 PF00175 Oxidoreductase NAD-binding domain DY252_RS07110 PF02798 Glutathione S-transferase, N-terminal domain DY252_RS07115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS07115 PF03466 LysR substrate binding domain DY252_RS07120 PF00156 Phosphoribosyl transferase domain DY252_RS07125 PF00462 Glutaredoxin DY252_RS07140 PF00795 Carbon-nitrogen hydrolase DY252_RS07175 PF13840 ACT domain DY252_RS07175 PF00696 Amino acid kinase family DY252_RS07175 PF01842 ACT domain DY252_RS07180 PF03060 Nitronate monooxygenase DY252_RS07185 PF00391 PEP-utilising enzyme, mobile domain DY252_RS07185 PF02896 PEP-utilising enzyme, TIM barrel domain DY252_RS07185 PF05524 PEP-utilising enzyme, N-terminal DY252_RS07185 PF01590 GAF domain DY252_RS07195 PF04551 GcpE protein DY252_RS07205 PF01488 Shikimate / quinate 5-dehydrogenase DY252_RS07205 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DY252_RS07205 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DY252_RS07210 PF00472 RF-1 domain DY252_RS07210 PF03462 PCRF domain DY252_RS07215 PF17827 PrmC N-terminal domain DY252_RS07215 PF13847 Methyltransferase domain DY252_RS07235 PF00004 ATPase family associated with various cellular activities (AAA) DY252_RS07235 PF07724 AAA domain (Cdc48 subfamily) DY252_RS07235 PF17871 AAA lid domain DY252_RS07235 PF10431 C-terminal, D2-small domain, of ClpB protein DY252_RS07235 PF02861 Clp amino terminal domain, pathogenicity island component DY252_RS07250 PF00501 AMP-binding enzyme DY252_RS07260 PF03109 ABC1 family DY252_RS07265 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DY252_RS07265 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DY252_RS07270 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DY252_RS07275 PF02233 NAD(P) transhydrogenase beta subunit DY252_RS07280 PF02463 RecF/RecN/SMC N terminal domain DY252_RS07295 PF01165 Ribosomal protein S21 DY252_RS07310 PF01327 Polypeptide deformylase DY252_RS07325 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DY252_RS07325 PF02222 ATP-grasp domain DY252_RS07330 PF00731 AIR carboxylase DY252_RS07345 PF00365 Phosphofructokinase DY252_RS07355 PF02441 Flavoprotein DY252_RS07365 PF16177 Acetyl-coenzyme A synthetase N-terminus DY252_RS07365 PF00501 AMP-binding enzyme DY252_RS07365 PF13193 AMP-binding enzyme C-terminal domain DY252_RS07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS07375 PF03466 LysR substrate binding domain DY252_RS07380 PF08220 DeoR-like helix-turn-helix domain DY252_RS07380 PF00455 DeoR C terminal sensor domain DY252_RS07390 PF00698 Acyl transferase domain DY252_RS07390 PF08659 KR domain DY252_RS07390 PF02801 Beta-ketoacyl synthase, C-terminal domain DY252_RS07390 PF00550 Phosphopantetheine attachment site DY252_RS07390 PF00109 Beta-ketoacyl synthase, N-terminal domain DY252_RS07390 PF16197 Ketoacyl-synthetase C-terminal extension DY252_RS07390 PF00107 Zinc-binding dehydrogenase DY252_RS07390 PF14765 Polyketide synthase dehydratase DY252_RS07390 PF08240 Alcohol dehydrogenase GroES-like domain DY252_RS07405 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_RS07410 PF01197 Ribosomal protein L31 DY252_RS07415 PF01491 Frataxin-like domain DY252_RS07420 PF00664 ABC transporter transmembrane region DY252_RS07420 PF00005 ABC transporter DY252_RS07425 PF01551 Peptidase family M23 DY252_RS07425 PF08525 Opacity-associated protein A N-terminal motif DY252_RS07425 PF01476 LysM domain DY252_RS07460 PF02082 Transcriptional regulator DY252_RS07470 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS07475 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS07480 PF12857 TOBE-like domain DY252_RS07480 PF00005 ABC transporter DY252_RS07485 PF02080 TrkA-C domain DY252_RS07485 PF03600 Citrate transporter DY252_RS07500 PF01494 FAD binding domain DY252_RS07505 PF00158 Sigma-54 interaction domain DY252_RS07510 PF00005 ABC transporter DY252_RS07515 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS07520 PF00296 Luciferase-like monooxygenase DY252_RS07525 PF09084 NMT1/THI5 like DY252_RS07530 PF03358 NADPH-dependent FMN reductase DY252_RS07535 PF02080 TrkA-C domain DY252_RS07535 PF03600 Citrate transporter DY252_RS07545 PF02417 Chromate transporter DY252_RS07550 PF10114 Sensory domain found in PocR DY252_RS07550 PF12833 Helix-turn-helix domain DY252_RS07560 PF18818 Metallopeptidase superfamily domain DY252_RS07560 PF08401 Domain of unknown function (DUF1738) DY252_RS07570 PF02195 ParB-like nuclease domain DY252_RS07570 PF17762 HTH domain found in ParB protein DY252_RS07595 PF10502 Signal peptidase, peptidase S26 DY252_RS07600 PF01464 Transglycosylase SLT domain DY252_RS07615 PF02534 Type IV secretory system Conjugative DNA transfer DY252_RS07630 PF00437 Type II/IV secretion system protein DY252_RS07645 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DY252_RS07670 PF03743 Bacterial conjugation TrbI-like protein DY252_RS07715 PF00378 Enoyl-CoA hydratase/isomerase DY252_RS07715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DY252_RS07715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DY252_RS07725 PF01494 FAD binding domain DY252_RS07730 PF00106 short chain dehydrogenase DY252_RS07740 PF00378 Enoyl-CoA hydratase/isomerase DY252_RS07745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_RS07745 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_RS07745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_RS07750 PF13193 AMP-binding enzyme C-terminal domain DY252_RS07750 PF00501 AMP-binding enzyme DY252_RS07755 PF00266 Aminotransferase class-V DY252_RS07760 PF03301 Tryptophan 2,3-dioxygenase DY252_RS07770 PF02653 Branched-chain amino acid transport system / permease component DY252_RS07780 PF00005 ABC transporter DY252_RS07785 PF00005 ABC transporter DY252_RS07800 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS07805 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS07810 PF08402 TOBE domain DY252_RS07810 PF00005 ABC transporter DY252_RS07820 PF00392 Bacterial regulatory proteins, gntR family DY252_RS07820 PF00155 Aminotransferase class I and II DY252_RS07825 PF00202 Aminotransferase class-III DY252_RS07835 PF00106 short chain dehydrogenase DY252_RS07840 PF00158 Sigma-54 interaction domain DY252_RS07840 PF00072 Response regulator receiver domain DY252_RS07840 PF02954 Bacterial regulatory protein, Fis family DY252_RS07845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS07845 PF08447 PAS fold DY252_RS07845 PF00989 PAS fold DY252_RS07845 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS07855 PF07690 Major Facilitator Superfamily DY252_RS07860 PF03466 LysR substrate binding domain DY252_RS07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS07870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DY252_RS07870 PF00037 4Fe-4S binding domain DY252_RS07870 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DY252_RS07875 PF01568 Molydopterin dinucleotide binding domain DY252_RS07875 PF00037 4Fe-4S binding domain DY252_RS07875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DY252_RS07875 PF00384 Molybdopterin oxidoreductase DY252_RS07875 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DY252_RS07885 PF02634 FdhD/NarQ family DY252_RS07890 PF00701 Dihydrodipicolinate synthetase family DY252_RS07895 PF00392 Bacterial regulatory proteins, gntR family DY252_RS07895 PF07729 FCD domain DY252_RS07900 PF00920 Dehydratase family DY252_RS07905 PF03737 Aldolase/RraA DY252_RS07910 PF00171 Aldehyde dehydrogenase family DY252_RS07915 PF00480 ROK family DY252_RS07925 PF00005 ABC transporter DY252_RS07930 PF02653 Branched-chain amino acid transport system / permease component DY252_RS07935 PF13407 Periplasmic binding protein domain DY252_RS07945 PF00920 Dehydratase family DY252_RS07950 PF00551 Formyl transferase DY252_RS07955 PF00120 Glutamine synthetase, catalytic domain DY252_RS07960 PF01645 Conserved region in glutamate synthase DY252_RS07965 PF01493 GXGXG motif DY252_RS07980 PF08669 Glycine cleavage T-protein C-terminal barrel domain DY252_RS07980 PF01571 Aminomethyltransferase folate-binding domain DY252_RS07990 PF00970 Oxidoreductase FAD-binding domain DY252_RS07990 PF00175 Oxidoreductase NAD-binding domain DY252_RS07990 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_RS08005 PF08669 Glycine cleavage T-protein C-terminal barrel domain DY252_RS08005 PF01571 Aminomethyltransferase folate-binding domain DY252_RS08015 PF12833 Helix-turn-helix domain DY252_RS08015 PF01965 DJ-1/PfpI family DY252_RS08020 PF01266 FAD dependent oxidoreductase DY252_RS08025 PF04267 Sarcosine oxidase, delta subunit family DY252_RS08030 PF17806 Sarcosine oxidase A3 domain DY252_RS08030 PF01571 Aminomethyltransferase folate-binding domain DY252_RS08030 PF08669 Glycine cleavage T-protein C-terminal barrel domain DY252_RS08030 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS08045 PF01546 Peptidase family M20/M25/M40 DY252_RS08045 PF07687 Peptidase dimerisation domain DY252_RS08050 PF01513 ATP-NAD kinase DY252_RS08055 PF00440 Bacterial regulatory proteins, tetR family DY252_RS08055 PF16925 Tetracyclin repressor-like, C-terminal domain DY252_RS08065 PF04143 Sulphur transport DY252_RS08075 PF00270 DEAD/DEAH box helicase DY252_RS08075 PF00271 Helicase conserved C-terminal domain DY252_RS08080 PF00313 'Cold-shock' DNA-binding domain DY252_RS08085 PF00392 Bacterial regulatory proteins, gntR family DY252_RS08085 PF07729 FCD domain DY252_RS08095 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS08105 PF00005 ABC transporter DY252_RS08115 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DY252_RS08120 PF00171 Aldehyde dehydrogenase family DY252_RS08135 PF02492 CobW/HypB/UreG, nucleotide-binding domain DY252_RS08135 PF07683 Cobalamin synthesis protein cobW C-terminal domain DY252_RS08140 PF03073 TspO/MBR family DY252_RS08150 PF17200 Single Cache domain 2 DY252_RS08150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS08150 PF00672 HAMP domain DY252_RS08155 PF00043 Glutathione S-transferase, C-terminal domain DY252_RS08155 PF02798 Glutathione S-transferase, N-terminal domain DY252_RS08160 PF02798 Glutathione S-transferase, N-terminal domain DY252_RS08160 PF00043 Glutathione S-transferase, C-terminal domain DY252_RS08165 PF07690 Major Facilitator Superfamily DY252_RS08165 PF00083 Sugar (and other) transporter DY252_RS08170 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DY252_RS08170 PF06481 COX Aromatic Rich Motif DY252_RS08175 PF00115 Cytochrome C and Quinol oxidase polypeptide I DY252_RS08180 PF00510 Cytochrome c oxidase subunit III DY252_RS08185 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DY252_RS08190 PF02104 SURF1 family DY252_RS08200 PF02798 Glutathione S-transferase, N-terminal domain DY252_RS08200 PF14834 Glutathione S-transferase, C-terminal domain DY252_RS08210 PF13649 Methyltransferase domain DY252_RS08215 PF17922 Tetracyclin repressor-like, C-terminal domain DY252_RS08215 PF00440 Bacterial regulatory proteins, tetR family DY252_RS08220 PF00186 Dihydrofolate reductase DY252_RS08225 PF00303 Thymidylate synthase DY252_RS08245 PF05681 Fumarate hydratase (Fumerase) DY252_RS08245 PF05683 Fumarase C-terminus DY252_RS08255 PF00892 EamA-like transporter family DY252_RS08260 PF12729 Four helix bundle sensory module for signal transduction DY252_RS08260 PF00672 HAMP domain DY252_RS08260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS08265 PF05145 Transition state regulatory protein AbrB DY252_RS08290 PF08448 PAS fold DY252_RS08290 PF08447 PAS fold DY252_RS08290 PF00563 EAL domain DY252_RS08290 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS08300 PF00072 Response regulator receiver domain DY252_RS08300 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS08305 PF01740 STAS domain DY252_RS08310 PF00158 Sigma-54 interaction domain DY252_RS08310 PF02954 Bacterial regulatory protein, Fis family DY252_RS08310 PF00072 Response regulator receiver domain DY252_RS08315 PF00155 Aminotransferase class I and II DY252_RS08335 PF13407 Periplasmic binding protein domain DY252_RS08340 PF00072 Response regulator receiver domain DY252_RS08340 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS08345 PF01098 Cell cycle protein DY252_RS08350 PF03717 Penicillin-binding Protein dimerisation domain DY252_RS08350 PF00905 Penicillin binding protein transpeptidase domain DY252_RS08360 PF04085 rod shape-determining protein MreC DY252_RS08375 PF08502 LeuA allosteric (dimerisation) domain DY252_RS08375 PF00682 HMGL-like DY252_RS08380 PF01810 LysE type translocator DY252_RS08395 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS08405 PF00313 'Cold-shock' DNA-binding domain DY252_RS08410 PF01812 5-formyltetrahydrofolate cyclo-ligase family DY252_RS08430 PF02541 Ppx/GppA phosphatase family DY252_RS08435 PF01728 FtsJ-like methyltransferase DY252_RS08440 PF08447 PAS fold DY252_RS08440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS08445 PF00478 IMP dehydrogenase / GMP reductase domain DY252_RS08445 PF00571 CBS domain DY252_RS08450 PF01029 NusB family DY252_RS08450 PF01189 16S rRNA methyltransferase RsmB/F DY252_RS08460 PF00117 Glutamine amidotransferase class-I DY252_RS08460 PF00958 GMP synthase C terminal domain DY252_RS08460 PF02540 NAD synthase DY252_RS08490 PF13443 Cro/C1-type HTH DNA-binding domain DY252_RS08505 PF00403 Heavy-metal-associated domain DY252_RS08510 PF00294 pfkB family carbohydrate kinase DY252_RS08515 PF14031 Putative serine dehydratase domain DY252_RS08520 PF00497 Bacterial extracellular solute-binding proteins, family 3 DY252_RS08525 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS08530 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS08535 PF00005 ABC transporter DY252_RS08540 PF01042 Endoribonuclease L-PSP DY252_RS08580 PF00171 Aldehyde dehydrogenase family DY252_RS08585 PF12697 Alpha/beta hydrolase family DY252_RS08590 PF00293 NUDIX domain DY252_RS08610 PF01547 Bacterial extracellular solute-binding protein DY252_RS08615 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS08620 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS08625 PF00128 Alpha amylase, catalytic domain DY252_RS08630 PF17912 MalK OB fold domain DY252_RS08630 PF00005 ABC transporter DY252_RS08630 PF03459 TOBE domain DY252_RS08635 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DY252_RS08635 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DY252_RS08640 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DY252_RS08645 PF00920 Dehydratase family DY252_RS08650 PF02685 Glucokinase DY252_RS08655 PF01081 KDPG and KHG aldolase DY252_RS08665 PF03466 LysR substrate binding domain DY252_RS08665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS08670 PF04545 Sigma-70, region 4 DY252_RS08670 PF04542 Sigma-70 region 2 DY252_RS08695 PF01297 Zinc-uptake complex component A periplasmic DY252_RS08710 PF04293 SpoVR like protein DY252_RS08715 PF04285 Protein of unknown function (DUF444) DY252_RS08720 PF06798 PrkA serine protein kinase C-terminal domain DY252_RS08720 PF08298 PrkA AAA domain DY252_RS08725 PF00581 Rhodanese-like domain DY252_RS08735 PF01042 Endoribonuclease L-PSP DY252_RS08750 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS08755 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DY252_RS08760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS08795 PF00588 SpoU rRNA Methylase family DY252_RS08795 PF08032 RNA 2'-O ribose methyltransferase substrate binding DY252_RS08810 PF03143 Elongation factor Tu C-terminal domain DY252_RS08810 PF03144 Elongation factor Tu domain 2 DY252_RS08810 PF00009 Elongation factor Tu GTP binding domain DY252_RS08820 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DY252_RS08825 PF02357 Transcription termination factor nusG DY252_RS08825 PF00467 KOW motif DY252_RS08830 PF00298 Ribosomal protein L11, RNA binding domain DY252_RS08830 PF03946 Ribosomal protein L11, N-terminal domain DY252_RS08835 PF00687 Ribosomal protein L1p/L10e family DY252_RS08840 PF00466 Ribosomal protein L10 DY252_RS08845 PF00542 Ribosomal protein L7/L12 C-terminal domain DY252_RS08845 PF16320 Ribosomal protein L7/L12 dimerisation domain DY252_RS08850 PF04565 RNA polymerase Rpb2, domain 3 DY252_RS08850 PF04563 RNA polymerase beta subunit DY252_RS08850 PF10385 RNA polymerase beta subunit external 1 domain DY252_RS08850 PF00562 RNA polymerase Rpb2, domain 6 DY252_RS08850 PF04560 RNA polymerase Rpb2, domain 7 DY252_RS08850 PF04561 RNA polymerase Rpb2, domain 2 DY252_RS08855 PF05000 RNA polymerase Rpb1, domain 4 DY252_RS08855 PF04998 RNA polymerase Rpb1, domain 5 DY252_RS08855 PF04997 RNA polymerase Rpb1, domain 1 DY252_RS08855 PF00623 RNA polymerase Rpb1, domain 2 DY252_RS08855 PF04983 RNA polymerase Rpb1, domain 3 DY252_RS08860 PF00164 Ribosomal protein S12/S23 DY252_RS08865 PF00177 Ribosomal protein S7p/S5e DY252_RS08870 PF00009 Elongation factor Tu GTP binding domain DY252_RS08870 PF03144 Elongation factor Tu domain 2 DY252_RS08870 PF03764 Elongation factor G, domain IV DY252_RS08870 PF14492 Elongation Factor G, domain II DY252_RS08870 PF00679 Elongation factor G C-terminus DY252_RS08875 PF00009 Elongation factor Tu GTP binding domain DY252_RS08875 PF03144 Elongation factor Tu domain 2 DY252_RS08875 PF03143 Elongation factor Tu C-terminal domain DY252_RS08880 PF00338 Ribosomal protein S10p/S20e DY252_RS08885 PF00297 Ribosomal protein L3 DY252_RS08890 PF00573 Ribosomal protein L4/L1 family DY252_RS08895 PF00276 Ribosomal protein L23 DY252_RS08900 PF03947 Ribosomal Proteins L2, C-terminal domain DY252_RS08900 PF00181 Ribosomal Proteins L2, RNA binding domain DY252_RS08905 PF00203 Ribosomal protein S19 DY252_RS08910 PF00237 Ribosomal protein L22p/L17e DY252_RS08915 PF07650 KH domain DY252_RS08915 PF00189 Ribosomal protein S3, C-terminal domain DY252_RS08920 PF00252 Ribosomal protein L16p/L10e DY252_RS08925 PF00831 Ribosomal L29 protein DY252_RS08930 PF00366 Ribosomal protein S17 DY252_RS08935 PF00238 Ribosomal protein L14p/L23e DY252_RS08940 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DY252_RS08940 PF00467 KOW motif DY252_RS08945 PF00673 ribosomal L5P family C-terminus DY252_RS08945 PF00281 Ribosomal protein L5 DY252_RS08950 PF00253 Ribosomal protein S14p/S29e DY252_RS08955 PF00410 Ribosomal protein S8 DY252_RS08960 PF00347 Ribosomal protein L6 DY252_RS08965 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DY252_RS08970 PF03719 Ribosomal protein S5, C-terminal domain DY252_RS08970 PF00333 Ribosomal protein S5, N-terminal domain DY252_RS08975 PF00327 Ribosomal protein L30p/L7e DY252_RS08980 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DY252_RS08985 PF00344 SecY translocase DY252_RS08990 PF05191 Adenylate kinase, active site lid DY252_RS08995 PF00416 Ribosomal protein S13/S18 DY252_RS09000 PF00411 Ribosomal protein S11 DY252_RS09005 PF01000 RNA polymerase Rpb3/RpoA insert domain DY252_RS09005 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DY252_RS09005 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DY252_RS09010 PF01196 Ribosomal protein L17 DY252_RS09015 PF13180 PDZ domain DY252_RS09015 PF17820 PDZ domain DY252_RS09025 PF00004 ATPase family associated with various cellular activities (AAA) DY252_RS09025 PF16193 AAA C-terminal domain DY252_RS09025 PF12002 MgsA AAA+ ATPase C terminal DY252_RS09030 PF02525 Flavodoxin-like fold DY252_RS09040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DY252_RS09045 PF00849 RNA pseudouridylate synthase DY252_RS09045 PF01479 S4 domain DY252_RS09055 PF13419 Haloacid dehalogenase-like hydrolase DY252_RS09070 PF01738 Dienelactone hydrolase family DY252_RS09075 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS09080 PF00005 ABC transporter DY252_RS09095 PF00563 EAL domain DY252_RS09095 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS09095 PF03707 Bacterial signalling protein N terminal repeat DY252_RS09105 PF01039 Carboxyl transferase domain DY252_RS09110 PF00289 Biotin carboxylase, N-terminal domain DY252_RS09110 PF00364 Biotin-requiring enzyme DY252_RS09110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DY252_RS09110 PF02785 Biotin carboxylase C-terminal domain DY252_RS09110 PF18140 Propionyl-coenzyme A carboxylase BT domain DY252_RS09130 PF00708 Acylphosphatase DY252_RS09160 PF02913 FAD linked oxidases, C-terminal domain DY252_RS09160 PF01565 FAD binding domain DY252_RS09165 PF01300 Telomere recombination DY252_RS09165 PF03481 Putative GTP-binding controlling metal-binding DY252_RS09170 PF00459 Inositol monophosphatase family DY252_RS09180 PF01875 Memo-like protein DY252_RS09205 PF00583 Acetyltransferase (GNAT) family DY252_RS09215 PF13289 SIR2-like domain DY252_RS09220 PF00883 Cytosol aminopeptidase family, catalytic domain DY252_RS09220 PF02789 Cytosol aminopeptidase family, N-terminal domain DY252_RS09225 PF04364 DNA polymerase III chi subunit, HolC DY252_RS09230 PF00005 ABC transporter DY252_RS09230 PF09383 NIL domain DY252_RS09235 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS09240 PF03180 NLPA lipoprotein DY252_RS09255 PF07690 Major Facilitator Superfamily DY252_RS09270 PF01381 Helix-turn-helix DY252_RS09275 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB DY252_RS09295 PF12848 ABC transporter DY252_RS09295 PF00005 ABC transporter DY252_RS09300 PF00334 Nucleoside diphosphate kinase DY252_RS09330 PF00551 Formyl transferase DY252_RS09335 PF02769 AIR synthase related protein, C-terminal domain DY252_RS09335 PF00586 AIR synthase related protein, N-terminal domain DY252_RS09345 PF01594 AI-2E family transporter DY252_RS09350 PF08299 Bacterial dnaA protein helix-turn-helix DY252_RS09350 PF00308 Bacterial dnaA protein DY252_RS09350 PF11638 DnaA N-terminal domain DY252_RS09355 PF18030 RimK PreATP-grasp domain DY252_RS09355 PF08443 RimK-like ATP-grasp domain DY252_RS09360 PF18030 RimK PreATP-grasp domain DY252_RS09360 PF08443 RimK-like ATP-grasp domain DY252_RS09370 PF00570 HRDC domain DY252_RS09370 PF01612 3'-5' exonuclease DY252_RS09380 PF00440 Bacterial regulatory proteins, tetR family DY252_RS09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS09400 PF03466 LysR substrate binding domain DY252_RS09415 PF02541 Ppx/GppA phosphatase family DY252_RS09420 PF13090 Polyphosphate kinase C-terminal domain 2 DY252_RS09420 PF13089 Polyphosphate kinase N-terminal domain DY252_RS09420 PF17941 Polyphosphate kinase C-terminal domain 1 DY252_RS09420 PF02503 Polyphosphate kinase middle domain DY252_RS09430 PF01336 OB-fold nucleic acid binding domain DY252_RS09430 PF00152 tRNA synthetases class II (D, K and N) DY252_RS09430 PF02938 GAD domain DY252_RS09450 PF01022 Bacterial regulatory protein, arsR family DY252_RS09460 PF00850 Histone deacetylase domain DY252_RS09465 PF02609 Exonuclease VII small subunit DY252_RS09470 PF00348 Polyprenyl synthetase DY252_RS09480 PF02780 Transketolase, C-terminal domain DY252_RS09480 PF02779 Transketolase, pyrimidine binding domain DY252_RS09480 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DY252_RS09495 PF13193 AMP-binding enzyme C-terminal domain DY252_RS09495 PF00501 AMP-binding enzyme DY252_RS09505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS09505 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DY252_RS09515 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS09520 PF00392 Bacterial regulatory proteins, gntR family DY252_RS09520 PF07729 FCD domain DY252_RS09525 PF01728 FtsJ-like methyltransferase DY252_RS09525 PF01479 S4 domain DY252_RS09545 PF00775 Dioxygenase DY252_RS09545 PF04444 Catechol dioxygenase N terminus DY252_RS09565 PF03631 Virulence factor BrkB DY252_RS09580 PF00501 AMP-binding enzyme DY252_RS09590 PF12795 Mechanosensitive ion channel porin domain DY252_RS09590 PF12794 Mechanosensitive ion channel inner membrane domain 1 DY252_RS09590 PF00924 Mechanosensitive ion channel DY252_RS09595 PF00226 DnaJ domain DY252_RS09595 PF01556 DnaJ C terminal domain DY252_RS09595 PF00684 DnaJ central domain DY252_RS09600 PF05433 Glycine zipper 2TM domain DY252_RS09600 PF16998 17 kDa outer membrane surface antigen DY252_RS09605 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DY252_RS09605 PF01243 Pyridoxamine 5'-phosphate oxidase DY252_RS09610 PF01022 Bacterial regulatory protein, arsR family DY252_RS09625 PF02586 SOS response associated peptidase (SRAP) DY252_RS09635 PF13508 Acetyltransferase (GNAT) domain DY252_RS09650 PF00155 Aminotransferase class I and II DY252_RS09665 PF03466 LysR substrate binding domain DY252_RS09665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS09680 PF00156 Phosphoribosyl transferase domain DY252_RS09690 PF01740 STAS domain DY252_RS09690 PF00916 Sulfate permease family DY252_RS09695 PF00378 Enoyl-CoA hydratase/isomerase DY252_RS09705 PF07690 Major Facilitator Superfamily DY252_RS09715 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS09720 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DY252_RS09725 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS09730 PF02954 Bacterial regulatory protein, Fis family DY252_RS09730 PF00072 Response regulator receiver domain DY252_RS09730 PF00158 Sigma-54 interaction domain DY252_RS09735 PF02743 Cache domain DY252_RS09735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS09735 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS09750 PF04055 Radical SAM superfamily DY252_RS09765 PF02525 Flavodoxin-like fold DY252_RS09770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS09770 PF03466 LysR substrate binding domain DY252_RS09775 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS09780 PF01261 Xylose isomerase-like TIM barrel DY252_RS09785 PF13660 Domain of unknown function (DUF4147) DY252_RS09785 PF05161 MOFRL family DY252_RS09790 PF00392 Bacterial regulatory proteins, gntR family DY252_RS09790 PF07729 FCD domain DY252_RS09800 PF04107 Glutamate-cysteine ligase family 2(GCS2) DY252_RS09805 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) DY252_RS09820 PF08269 Cache domain DY252_RS09820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS09850 PF00753 Metallo-beta-lactamase superfamily DY252_RS09855 PF00753 Metallo-beta-lactamase superfamily DY252_RS09855 PF04273 Putative phosphatase (DUF442) DY252_RS09860 PF00916 Sulfate permease family DY252_RS09860 PF01740 STAS domain DY252_RS09865 PF03594 Benzoate membrane transport protein DY252_RS09870 PF10417 C-terminal domain of 1-Cys peroxiredoxin DY252_RS09870 PF00578 AhpC/TSA family DY252_RS09880 PF13677 Membrane MotB of proton-channel complex MotA/MotB DY252_RS09880 PF00691 OmpA family DY252_RS09895 PF00459 Inositol monophosphatase family DY252_RS09900 PF09285 Elongation factor P, C-terminal DY252_RS09900 PF01132 Elongation factor P (EF-P) OB domain DY252_RS09900 PF08207 Elongation factor P (EF-P) KOW-like domain DY252_RS09905 PF02581 Thiamine monophosphate synthase DY252_RS09920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DY252_RS09920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DY252_RS09925 PF02779 Transketolase, pyrimidine binding domain DY252_RS09925 PF02780 Transketolase, C-terminal domain DY252_RS09925 PF00456 Transketolase, thiamine diphosphate binding domain DY252_RS09935 PF05164 Cell division protein ZapA DY252_RS09945 PF13277 YmdB-like protein DY252_RS09950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS09950 PF08269 Cache domain DY252_RS09955 PF00672 HAMP domain DY252_RS09955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS09955 PF17200 Single Cache domain 2 DY252_RS09960 PF01709 Transcriptional regulator DY252_RS09965 PF02075 Crossover junction endodeoxyribonuclease RuvC DY252_RS09970 PF01330 RuvA N terminal domain DY252_RS09970 PF07499 RuvA, C-terminal domain DY252_RS09975 PF05496 Holliday junction DNA helicase RuvB P-loop domain DY252_RS09975 PF05491 RuvB C-terminal winged helix domain DY252_RS09975 PF17864 RuvB AAA lid domain DY252_RS09980 PF03061 Thioesterase superfamily DY252_RS09985 PF01618 MotA/TolQ/ExbB proton channel family DY252_RS09990 PF02472 Biopolymer transport protein ExbD/TolR DY252_RS10000 PF07676 WD40-like Beta Propeller Repeat DY252_RS10000 PF04052 TolB amino-terminal domain DY252_RS10005 PF00691 OmpA family DY252_RS10015 PF01171 PP-loop family DY252_RS10020 PF17862 AAA+ lid domain DY252_RS10020 PF01434 Peptidase family M41 DY252_RS10020 PF00004 ATPase family associated with various cellular activities (AAA) DY252_RS10020 PF06480 FtsH Extracellular DY252_RS10025 PF00809 Pterin binding enzyme DY252_RS10030 PF00486 Transcriptional regulatory protein, C terminal DY252_RS10030 PF00072 Response regulator receiver domain DY252_RS10040 PF13493 Domain of unknown function (DUF4118) DY252_RS10040 PF13492 GAF domain DY252_RS10040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS10040 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS10040 PF02702 Osmosensitive K+ channel His kinase sensor domain DY252_RS10045 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DY252_RS10045 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DY252_RS10045 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DY252_RS10045 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DY252_RS10050 PF02581 Thiamine monophosphate synthase DY252_RS10050 PF08543 Phosphomethylpyrimidine kinase DY252_RS10085 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DY252_RS10085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DY252_RS10090 PF01037 Lrp/AsnC ligand binding domain DY252_RS10100 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS10105 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS10110 PF08402 TOBE domain DY252_RS10110 PF00005 ABC transporter DY252_RS10115 PF13416 Bacterial extracellular solute-binding protein DY252_RS10120 PF00120 Glutamine synthetase, catalytic domain DY252_RS10130 PF13378 Enolase C-terminal domain-like DY252_RS10130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DY252_RS10135 PF01548 Transposase DY252_RS10135 PF02371 Transposase IS116/IS110/IS902 family DY252_RS10140 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS10140 PF17151 Periplasmic sensor domain DY252_RS10170 PF00005 ABC transporter DY252_RS10175 PF13533 Biotin-lipoyl like DY252_RS10180 PF10518 TAT (twin-arginine translocation) pathway signal sequence DY252_RS10180 PF00149 Calcineurin-like phosphoesterase DY252_RS10185 PF00202 Aminotransferase class-III DY252_RS10190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS10190 PF03466 LysR substrate binding domain DY252_RS10210 PF01850 PIN domain DY252_RS10215 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DY252_RS10230 PF02913 FAD linked oxidases, C-terminal domain DY252_RS10230 PF13183 4Fe-4S dicluster domain DY252_RS10230 PF01565 FAD binding domain DY252_RS10235 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DY252_RS10235 PF17287 POTRA domain DY252_RS10235 PF08479 POTRA domain, ShlB-type DY252_RS10240 PF05860 haemagglutination activity domain DY252_RS10240 PF13332 Hemagglutinin repeat DY252_RS10240 PF05594 Haemagluttinin repeat DY252_RS10240 PF13018 Extended Signal Peptide of Type V secretion system DY252_RS10240 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain DY252_RS10250 PF00005 ABC transporter DY252_RS10255 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS10260 PF09084 NMT1/THI5 like DY252_RS10265 PF00491 Arginase family DY252_RS10270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS10270 PF03466 LysR substrate binding domain DY252_RS10275 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DY252_RS10280 PF14850 DNA-binding domain of Proline dehydrogenase DY252_RS10280 PF00171 Aldehyde dehydrogenase family DY252_RS10280 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DY252_RS10280 PF01619 Proline dehydrogenase DY252_RS10285 PF03466 LysR substrate binding domain DY252_RS10285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS10300 PF12464 Maltose acetyltransferase DY252_RS10300 PF14602 Hexapeptide repeat of succinyl-transferase DY252_RS10315 PF00072 Response regulator receiver domain DY252_RS10315 PF00486 Transcriptional regulatory protein, C terminal DY252_RS10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS10320 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS10325 PF00356 Bacterial regulatory proteins, lacI family DY252_RS10330 PF01547 Bacterial extracellular solute-binding protein DY252_RS10335 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS10345 PF08402 TOBE domain DY252_RS10345 PF00005 ABC transporter DY252_RS10350 PF00149 Calcineurin-like phosphoesterase DY252_RS10355 PF01494 FAD binding domain DY252_RS10360 PF00893 Small Multidrug Resistance protein DY252_RS10365 PF08338 Domain of unknown function (DUF1731) DY252_RS10365 PF01370 NAD dependent epimerase/dehydratase family DY252_RS10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS10375 PF03466 LysR substrate binding domain DY252_RS10390 PF00884 Sulfatase DY252_RS10390 PF08019 Phosphoethanolamine transferase EptA/EptB DY252_RS10400 PF01894 Uncharacterised protein family UPF0047 DY252_RS10425 PF00857 Isochorismatase family DY252_RS10430 PF02867 Ribonucleotide reductase, barrel domain DY252_RS10430 PF08471 Class II vitamin B12-dependent ribonucleotide reductase DY252_RS10450 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) DY252_RS10460 PF04264 YceI-like domain DY252_RS10465 PF01292 Prokaryotic cytochrome b561 DY252_RS10475 PF08269 Cache domain DY252_RS10475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS10480 PF08269 Cache domain DY252_RS10480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS10485 PF02230 Phospholipase/Carboxylesterase DY252_RS10490 PF01554 MatE DY252_RS10495 PF01037 Lrp/AsnC ligand binding domain DY252_RS10505 PF02082 Transcriptional regulator DY252_RS10510 PF00271 Helicase conserved C-terminal domain DY252_RS10510 PF00270 DEAD/DEAH box helicase DY252_RS10530 PF00204 DNA gyrase B DY252_RS10530 PF01751 Toprim domain DY252_RS10530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS10530 PF00986 DNA gyrase B subunit, carboxyl terminus DY252_RS10535 PF03061 Thioesterase superfamily DY252_RS10550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_RS10550 PF00005 ABC transporter DY252_RS10555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_RS10555 PF00005 ABC transporter DY252_RS10560 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS10560 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_RS10565 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS10570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_RS10600 PF00158 Sigma-54 interaction domain DY252_RS10600 PF00072 Response regulator receiver domain DY252_RS10600 PF02954 Bacterial regulatory protein, Fis family DY252_RS10605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DY252_RS10610 PF00224 Pyruvate kinase, barrel domain DY252_RS10610 PF02887 Pyruvate kinase, alpha/beta domain DY252_RS10630 PF01965 DJ-1/PfpI family DY252_RS10635 PF00924 Mechanosensitive ion channel DY252_RS10635 PF05552 Conserved TM helix DY252_RS10640 PF00691 OmpA family DY252_RS10650 PF13380 CoA binding domain DY252_RS10655 PF01794 Ferric reductase like transmembrane component DY252_RS10665 PF01810 LysE type translocator DY252_RS10690 PF00572 Ribosomal protein L13 DY252_RS10695 PF00380 Ribosomal protein S9/S16 DY252_RS10700 PF01070 FMN-dependent dehydrogenase DY252_RS10715 PF00483 Nucleotidyl transferase DY252_RS10720 PF16363 GDP-mannose 4,6 dehydratase DY252_RS10725 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DY252_RS10730 PF08421 Putative zinc binding domain DY252_RS10730 PF08484 C-methyltransferase C-terminal domain DY252_RS10735 PF01370 NAD dependent epimerase/dehydratase family DY252_RS10745 PF04989 Cephalosporin hydroxylase DY252_RS10760 PF01118 Semialdehyde dehydrogenase, NAD binding domain DY252_RS10760 PF02774 Semialdehyde dehydrogenase, dimerisation domain DY252_RS10765 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_RS10770 PF03150 Di-haem cytochrome c peroxidase DY252_RS10775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DY252_RS10775 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DY252_RS10780 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DY252_RS10790 PF00155 Aminotransferase class I and II DY252_RS10795 PF00742 Homoserine dehydrogenase DY252_RS10795 PF01842 ACT domain DY252_RS10795 PF03447 Homoserine dehydrogenase, NAD binding domain DY252_RS10800 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DY252_RS10805 PF00012 Hsp70 protein DY252_RS10820 PF02272 DHHA1 domain DY252_RS10820 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DY252_RS10820 PF17768 RecJ OB domain DY252_RS10820 PF01368 DHH family DY252_RS10825 PF07690 Major Facilitator Superfamily DY252_RS10845 PF00817 impB/mucB/samB family DY252_RS10845 PF11799 impB/mucB/samB family C-terminal domain DY252_RS10865 PF00753 Metallo-beta-lactamase superfamily DY252_RS10865 PF12706 Beta-lactamase superfamily domain DY252_RS10870 PF00691 OmpA family DY252_RS10870 PF13677 Membrane MotB of proton-channel complex MotA/MotB DY252_RS10875 PF01618 MotA/TolQ/ExbB proton channel family DY252_RS10880 PF00672 HAMP domain DY252_RS10880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS10895 PF00156 Phosphoribosyl transferase domain DY252_RS10915 PF01053 Cys/Met metabolism PLP-dependent enzyme DY252_RS10920 PF01266 FAD dependent oxidoreductase DY252_RS10935 PF09084 NMT1/THI5 like DY252_RS10940 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS10945 PF00005 ABC transporter DY252_RS10965 PF00850 Histone deacetylase domain DY252_RS11000 PF00248 Aldo/keto reductase family DY252_RS11005 PF07683 Cobalamin synthesis protein cobW C-terminal domain DY252_RS11005 PF02492 CobW/HypB/UreG, nucleotide-binding domain DY252_RS11010 PF01502 Phosphoribosyl-AMP cyclohydrolase DY252_RS11020 PF00005 ABC transporter DY252_RS11025 PF00950 ABC 3 transport family DY252_RS11035 PF01053 Cys/Met metabolism PLP-dependent enzyme DY252_RS11040 PF13291 ACT domain DY252_RS11040 PF00291 Pyridoxal-phosphate dependent enzyme DY252_RS11045 PF01783 Ribosomal L32p protein family DY252_RS11060 PF00581 Rhodanese-like domain DY252_RS11065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DY252_RS11065 PF01411 tRNA synthetases class II (A) DY252_RS11065 PF02272 DHHA1 domain DY252_RS11090 PF01810 LysE type translocator DY252_RS11095 PF02652 L-lactate permease DY252_RS11100 PF00296 Luciferase-like monooxygenase DY252_RS11110 PF03466 LysR substrate binding domain DY252_RS11110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS11115 PF07690 Major Facilitator Superfamily DY252_RS11120 PF00291 Pyridoxal-phosphate dependent enzyme DY252_RS11125 PF00293 NUDIX domain DY252_RS11130 PF07694 5TMR of 5TMR-LYT DY252_RS11130 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS11140 PF01546 Peptidase family M20/M25/M40 DY252_RS11140 PF07687 Peptidase dimerisation domain DY252_RS11145 PF00684 DnaJ central domain DY252_RS11145 PF00226 DnaJ domain DY252_RS11145 PF01556 DnaJ C terminal domain DY252_RS11155 PF00444 Ribosomal protein L36 DY252_RS11170 PF03435 Saccharopine dehydrogenase NADP binding domain DY252_RS11170 PF16653 Saccharopine dehydrogenase C-terminal domain DY252_RS11190 PF01925 Sulfite exporter TauE/SafE DY252_RS11195 PF01206 Sulfurtransferase TusA DY252_RS11200 PF13673 Acetyltransferase (GNAT) domain DY252_RS11210 PF03707 Bacterial signalling protein N terminal repeat DY252_RS11210 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS11210 PF00563 EAL domain DY252_RS11215 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS11215 PF08448 PAS fold DY252_RS11215 PF00563 EAL domain DY252_RS11220 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS11235 PF05362 Lon protease (S16) C-terminal proteolytic domain DY252_RS11235 PF13654 AAA domain DY252_RS11240 PF00155 Aminotransferase class I and II DY252_RS11240 PF00392 Bacterial regulatory proteins, gntR family DY252_RS11250 PF00291 Pyridoxal-phosphate dependent enzyme DY252_RS11250 PF13291 ACT domain DY252_RS11260 PF02567 Phenazine biosynthesis-like protein DY252_RS11265 PF02080 TrkA-C domain DY252_RS11265 PF03600 Citrate transporter DY252_RS11275 PF13393 Histidyl-tRNA synthetase DY252_RS11280 PF00709 Adenylosuccinate synthetase DY252_RS11295 PF04542 Sigma-70 region 2 DY252_RS11295 PF00140 Sigma-70 factor, region 1.2 DY252_RS11295 PF04545 Sigma-70, region 4 DY252_RS11300 PF00849 RNA pseudouridylate synthase DY252_RS11315 PF00005 ABC transporter DY252_RS11315 PF00571 CBS domain DY252_RS11320 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS11340 PF13416 Bacterial extracellular solute-binding protein DY252_RS11345 PF13416 Bacterial extracellular solute-binding protein DY252_RS11360 PF10996 Beta-Casp domain DY252_RS11360 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DY252_RS11360 PF00753 Metallo-beta-lactamase superfamily DY252_RS11370 PF00534 Glycosyl transferases group 1 DY252_RS11370 PF13439 Glycosyltransferase Family 4 DY252_RS11375 PF13439 Glycosyltransferase Family 4 DY252_RS11375 PF00534 Glycosyl transferases group 1 DY252_RS11400 PF00005 ABC transporter DY252_RS11400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_RS11405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_RS11410 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS11415 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS11415 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_RS11430 PF12832 MFS_1 like family DY252_RS11435 PF01266 FAD dependent oxidoreductase DY252_RS11435 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DY252_RS11440 PF01207 Dihydrouridine synthase (Dus) DY252_RS11445 PF03960 ArsC family DY252_RS11450 PF13419 Haloacid dehalogenase-like hydrolase DY252_RS11475 PF00471 Ribosomal protein L33 DY252_RS11480 PF03572 Peptidase family S41 DY252_RS11480 PF13180 PDZ domain DY252_RS11495 PF00773 RNB domain DY252_RS11495 PF17876 Cold shock domain DY252_RS11495 PF08461 Ribonuclease R winged-helix domain DY252_RS11495 PF00575 S1 RNA binding domain DY252_RS11495 PF08206 Ribonuclease B OB domain DY252_RS11500 PF13368 Topoisomerase C-terminal repeat DY252_RS11500 PF01131 DNA topoisomerase DY252_RS11500 PF01396 Topoisomerase DNA binding C4 zinc finger DY252_RS11500 PF01751 Toprim domain DY252_RS11505 PF02481 DNA recombination-mediator protein A DY252_RS11505 PF17782 DprA winged helix domain DY252_RS11510 PF02660 Glycerol-3-phosphate acyltransferase DY252_RS11515 PF01979 Amidohydrolase family DY252_RS11520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DY252_RS11520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DY252_RS11535 PF03652 Holliday junction resolvase DY252_RS11540 PF08402 TOBE domain DY252_RS11540 PF00005 ABC transporter DY252_RS11550 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS11555 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS11560 PF02686 Glu-tRNAGln amidotransferase C subunit DY252_RS11565 PF01425 Amidase DY252_RS11570 PF02934 GatB/GatE catalytic domain DY252_RS11570 PF02637 GatB domain DY252_RS11575 PF03358 NADPH-dependent FMN reductase DY252_RS11580 PF00403 Heavy-metal-associated domain DY252_RS11585 PF01965 DJ-1/PfpI family DY252_RS11590 PF03466 LysR substrate binding domain DY252_RS11590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS11595 PF00265 Thymidine kinase DY252_RS11600 PF01810 LysE type translocator DY252_RS11605 PF03466 LysR substrate binding domain DY252_RS11605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS11610 PF04403 Paraquat-inducible protein A DY252_RS11615 PF02470 MlaD protein DY252_RS11630 PF01965 DJ-1/PfpI family DY252_RS11630 PF12833 Helix-turn-helix domain DY252_RS11675 PF00294 pfkB family carbohydrate kinase DY252_RS11680 PF02872 5'-nucleotidase, C-terminal domain DY252_RS11680 PF00149 Calcineurin-like phosphoesterase DY252_RS11685 PF02608 ABC transporter substrate-binding protein PnrA-like DY252_RS11690 PF00005 ABC transporter DY252_RS11700 PF02653 Branched-chain amino acid transport system / permease component DY252_RS11705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DY252_RS11710 PF01048 Phosphorylase superfamily DY252_RS11715 PF00591 Glycosyl transferase family, a/b domain DY252_RS11715 PF02885 Glycosyl transferase family, helical bundle domain DY252_RS11715 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DY252_RS11720 PF08220 DeoR-like helix-turn-helix domain DY252_RS11720 PF00455 DeoR C terminal sensor domain DY252_RS11725 PF00005 ABC transporter DY252_RS11730 PF00005 ABC transporter DY252_RS11735 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS11740 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS11745 PF00497 Bacterial extracellular solute-binding proteins, family 3 DY252_RS11750 PF13193 AMP-binding enzyme C-terminal domain DY252_RS11750 PF00501 AMP-binding enzyme DY252_RS11755 PF00994 Probable molybdopterin binding domain DY252_RS11765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS11765 PF12729 Four helix bundle sensory module for signal transduction DY252_RS11765 PF00672 HAMP domain DY252_RS11775 PF09339 IclR helix-turn-helix domain DY252_RS11775 PF01614 Bacterial transcriptional regulator DY252_RS11780 PF01625 Peptide methionine sulfoxide reductase DY252_RS11810 PF03129 Anticodon binding domain DY252_RS11810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DY252_RS11810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DY252_RS11810 PF02824 TGS domain DY252_RS11815 PF07690 Major Facilitator Superfamily DY252_RS11840 PF05698 Bacterial trigger factor protein (TF) C-terminus DY252_RS11845 PF03883 Peroxide stress protein YaaA DY252_RS11850 PF02885 Glycosyl transferase family, helical bundle domain DY252_RS11850 PF00591 Glycosyl transferase family, a/b domain DY252_RS11865 PF01891 Cobalt uptake substrate-specific transmembrane region DY252_RS11880 PF00005 ABC transporter DY252_RS11900 PF13607 Succinyl-CoA ligase like flavodoxin domain DY252_RS11900 PF00583 Acetyltransferase (GNAT) family DY252_RS11900 PF13380 CoA binding domain DY252_RS11925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS11925 PF08447 PAS fold DY252_RS11935 PF17773 UPF0176 acylphosphatase like domain DY252_RS11935 PF00581 Rhodanese-like domain DY252_RS11940 PF02321 Outer membrane efflux protein DY252_RS11950 PF00133 tRNA synthetases class I (I, L, M and V) DY252_RS11950 PF08264 Anticodon-binding domain of tRNA DY252_RS11950 PF10458 Valyl tRNA synthetase tRNA binding arm DY252_RS11955 PF00425 chorismate binding enzyme DY252_RS11955 PF04715 Anthranilate synthase component I, N terminal region DY252_RS11960 PF00117 Glutamine amidotransferase class-I DY252_RS11965 PF01063 Amino-transferase class IV DY252_RS11975 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DY252_RS11985 PF01521 Iron-sulphur cluster biosynthesis DY252_RS11990 PF03485 Arginyl tRNA synthetase N terminal domain DY252_RS11990 PF05746 DALR anticodon binding domain DY252_RS11990 PF00750 tRNA synthetases class I (R) DY252_RS12000 PF00933 Glycosyl hydrolase family 3 N terminal domain DY252_RS12005 PF02163 Peptidase family M50 DY252_RS12010 PF02616 Segregation and condensation protein ScpA DY252_RS12015 PF04079 Segregation and condensation complex subunit ScpB DY252_RS12020 PF08402 TOBE domain DY252_RS12020 PF00005 ABC transporter DY252_RS12025 PF02416 mttA/Hcf106 family DY252_RS12030 PF02416 mttA/Hcf106 family DY252_RS12035 PF00902 Sec-independent protein translocase protein (TatC) DY252_RS12040 PF02403 Seryl-tRNA synthetase N-terminal domain DY252_RS12040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DY252_RS12045 PF01975 Survival protein SurE DY252_RS12055 PF01551 Peptidase family M23 DY252_RS12055 PF01476 LysM domain DY252_RS12065 PF02699 Preprotein translocase subunit DY252_RS12080 PF04430 Protein of unknown function (DUF498/DUF598) DY252_RS12085 PF01593 Flavin containing amine oxidoreductase DY252_RS12090 PF00924 Mechanosensitive ion channel DY252_RS12105 PF01134 Glucose inhibited division protein A DY252_RS12115 PF17760 UvrA interaction domain DY252_RS12115 PF17755 UvrA DNA-binding domain DY252_RS12120 PF01116 Fructose-bisphosphate aldolase class-II DY252_RS12125 PF01979 Amidohydrolase family DY252_RS12130 PF13416 Bacterial extracellular solute-binding protein DY252_RS12135 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS12140 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS12145 PF00005 ABC transporter DY252_RS12145 PF17912 MalK OB fold domain DY252_RS12150 PF13185 GAF domain DY252_RS12155 PF00436 Single-strand binding protein family DY252_RS12165 PF02810 SEC-C motif DY252_RS12170 PF04545 Sigma-70, region 4 DY252_RS12170 PF04542 Sigma-70 region 2 DY252_RS12170 PF00140 Sigma-70 factor, region 1.2 DY252_RS12175 PF00293 NUDIX domain DY252_RS12175 PF13344 Haloacid dehalogenase-like hydrolase DY252_RS12190 PF00270 DEAD/DEAH box helicase DY252_RS12190 PF00271 Helicase conserved C-terminal domain DY252_RS12190 PF17191 RecG wedge domain DY252_RS12200 PF00271 Helicase conserved C-terminal domain DY252_RS12200 PF03461 TRCF domain DY252_RS12200 PF17757 UvrB interaction domain DY252_RS12200 PF00270 DEAD/DEAH box helicase DY252_RS12200 PF02559 CarD-like/TRCF domain DY252_RS12210 PF01676 Metalloenzyme superfamily DY252_RS12215 PF01791 DeoC/LacD family aldolase DY252_RS12225 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS12230 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS12235 PF00497 Bacterial extracellular solute-binding proteins, family 3 DY252_RS12240 PF00005 ABC transporter DY252_RS12245 PF02743 Cache domain DY252_RS12245 PF00672 HAMP domain DY252_RS12245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS12260 PF08274 PhnA Zinc-Ribbon DY252_RS12260 PF03831 PhnA domain DY252_RS12270 PF02698 DUF218 domain DY252_RS12275 PF13406 Transglycosylase SLT domain DY252_RS12280 PF05036 Sporulation related domain DY252_RS12280 PF03330 Lytic transglycolase DY252_RS12285 PF07943 Penicillin-binding protein 5, C-terminal domain DY252_RS12285 PF00768 D-alanyl-D-alanine carboxypeptidase DY252_RS12290 PF02223 Thymidylate kinase DY252_RS12295 PF09115 DNA polymerase III, delta subunit, C terminal DY252_RS12300 PF09334 tRNA synthetases class I (M) DY252_RS12300 PF08264 Anticodon-binding domain of tRNA DY252_RS12305 PF01026 TatD related DNase DY252_RS12310 PF03099 Biotin/lipoate A/B protein ligase family DY252_RS12310 PF12706 Beta-lactamase superfamily domain DY252_RS12335 PF00550 Phosphopantetheine attachment site DY252_RS12340 PF00550 Phosphopantetheine attachment site DY252_RS12350 PF13193 AMP-binding enzyme C-terminal domain DY252_RS12350 PF00501 AMP-binding enzyme DY252_RS12375 PF04820 Tryptophan halogenase DY252_RS12385 PF00109 Beta-ketoacyl synthase, N-terminal domain DY252_RS12385 PF02801 Beta-ketoacyl synthase, C-terminal domain DY252_RS12400 PF00109 Beta-ketoacyl synthase, N-terminal domain DY252_RS12400 PF02801 Beta-ketoacyl synthase, C-terminal domain DY252_RS12410 PF02653 Branched-chain amino acid transport system / permease component DY252_RS12415 PF02653 Branched-chain amino acid transport system / permease component DY252_RS12420 PF00005 ABC transporter DY252_RS12430 PF05384 Sensor protein DegS DY252_RS12430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS12430 PF07730 Histidine kinase DY252_RS12440 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS12440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS12445 PF00486 Transcriptional regulatory protein, C terminal DY252_RS12445 PF00072 Response regulator receiver domain DY252_RS12460 PF02515 CoA-transferase family III DY252_RS12480 PF01970 Tripartite tricarboxylate transporter TctA family DY252_RS12485 PF08269 Cache domain DY252_RS12485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS12490 PF05145 Transition state regulatory protein AbrB DY252_RS12495 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding DY252_RS12495 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS12495 PF10518 TAT (twin-arginine translocation) pathway signal sequence DY252_RS12505 PF00034 Cytochrome c DY252_RS12510 PF00174 Oxidoreductase molybdopterin binding domain DY252_RS12545 PF02683 Cytochrome C biogenesis protein transmembrane region DY252_RS12555 PF01022 Bacterial regulatory protein, arsR family DY252_RS12560 PF04143 Sulphur transport DY252_RS12575 PF00583 Acetyltransferase (GNAT) family DY252_RS12580 PF00202 Aminotransferase class-III DY252_RS12585 PF06339 Ectoine synthase DY252_RS12590 PF13840 ACT domain DY252_RS12590 PF00696 Amino acid kinase family DY252_RS12595 PF03819 MazG nucleotide pyrophosphohydrolase domain DY252_RS12600 PF00459 Inositol monophosphatase family DY252_RS12605 PF16360 GTP-binding GTPase Middle Region DY252_RS12605 PF13167 GTP-binding GTPase N-terminal DY252_RS12605 PF01926 50S ribosome-binding GTPase DY252_RS12610 PF17209 Hfq protein DY252_RS12620 PF02080 TrkA-C domain DY252_RS12620 PF02254 TrkA-N domain DY252_RS12625 PF00072 Response regulator receiver domain DY252_RS12625 PF00158 Sigma-54 interaction domain DY252_RS12625 PF02954 Bacterial regulatory protein, Fis family DY252_RS12630 PF00672 HAMP domain DY252_RS12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS12635 PF00072 Response regulator receiver domain DY252_RS12635 PF00158 Sigma-54 interaction domain DY252_RS12635 PF02954 Bacterial regulatory protein, Fis family DY252_RS12640 PF00989 PAS fold DY252_RS12640 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS12640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS12645 PF01207 Dihydrouridine synthase (Dus) DY252_RS12650 PF01578 Cytochrome C assembly protein DY252_RS12655 PF02542 YgbB family DY252_RS12655 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DY252_RS12660 PF04279 Intracellular septation protein A DY252_RS12665 PF03091 CutA1 divalent ion tolerance protein DY252_RS12685 PF13411 MerR HTH family regulatory protein DY252_RS12690 PF00216 Bacterial DNA-binding protein DY252_RS12695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DY252_RS12695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DY252_RS12700 PF02504 Fatty acid synthesis protein DY252_RS12720 PF00586 AIR synthase related protein, N-terminal domain DY252_RS12720 PF02769 AIR synthase related protein, C-terminal domain DY252_RS12725 PF01029 NusB family DY252_RS12730 PF00885 6,7-dimethyl-8-ribityllumazine synthase DY252_RS12735 PF00925 GTP cyclohydrolase II DY252_RS12735 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DY252_RS12740 PF00677 Lumazine binding domain DY252_RS12745 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DY252_RS12745 PF01872 RibD C-terminal domain DY252_RS12750 PF03477 ATP cone domain DY252_RS12755 PF00464 Serine hydroxymethyltransferase DY252_RS12760 PF02502 Ribose/Galactose Isomerase DY252_RS12765 PF05443 ROS/MUCR transcriptional regulator protein DY252_RS12770 PF13458 Periplasmic binding protein DY252_RS12780 PF00005 ABC transporter DY252_RS12785 PF00005 ABC transporter DY252_RS12785 PF12399 Branched-chain amino acid ATP-binding cassette transporter DY252_RS12790 PF11862 Domain of unknown function (DUF3382) DY252_RS12790 PF02653 Branched-chain amino acid transport system / permease component DY252_RS12795 PF02653 Branched-chain amino acid transport system / permease component DY252_RS12805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DY252_RS12805 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DY252_RS12810 PF00378 Enoyl-CoA hydratase/isomerase DY252_RS12815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_RS12815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_RS12815 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_RS12820 PF01053 Cys/Met metabolism PLP-dependent enzyme DY252_RS12825 PF00455 DeoR C terminal sensor domain DY252_RS12825 PF08220 DeoR-like helix-turn-helix domain DY252_RS12835 PF00490 Delta-aminolevulinic acid dehydratase DY252_RS12840 PF13419 Haloacid dehalogenase-like hydrolase DY252_RS12850 PF00501 AMP-binding enzyme DY252_RS12850 PF13193 AMP-binding enzyme C-terminal domain DY252_RS12860 PF00171 Aldehyde dehydrogenase family DY252_RS12865 PF00291 Pyridoxal-phosphate dependent enzyme DY252_RS12865 PF13291 ACT domain DY252_RS12870 PF01613 Flavin reductase like domain DY252_RS12875 PF01618 MotA/TolQ/ExbB proton channel family DY252_RS12880 PF13677 Membrane MotB of proton-channel complex MotA/MotB DY252_RS12880 PF00691 OmpA family DY252_RS12885 PF04376 Arginine-tRNA-protein transferase, N terminus DY252_RS12885 PF04377 Arginine-tRNA-protein transferase, C terminus DY252_RS12890 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS12895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS12905 PF03989 DNA gyrase C-terminal domain, beta-propeller DY252_RS12905 PF00521 DNA gyrase/topoisomerase IV, subunit A DY252_RS12910 PF02565 Recombination protein O C terminal DY252_RS12910 PF11967 Recombination protein O N terminal DY252_RS12920 PF07650 KH domain DY252_RS12920 PF01926 50S ribosome-binding GTPase DY252_RS12925 PF14622 Ribonuclease-III-like DY252_RS12925 PF00035 Double-stranded RNA binding motif DY252_RS12930 PF10502 Signal peptidase, peptidase S26 DY252_RS12935 PF01648 4'-phosphopantetheinyl transferase superfamily DY252_RS12940 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DY252_RS12950 PF04607 Region found in RelA / SpoT proteins DY252_RS12950 PF02824 TGS domain DY252_RS12950 PF13291 ACT domain DY252_RS12955 PF01192 RNA polymerase Rpb6 DY252_RS12970 PF03167 Uracil DNA glycosylase superfamily DY252_RS12975 PF16124 RecQ zinc-binding DY252_RS12975 PF00570 HRDC domain DY252_RS12975 PF00271 Helicase conserved C-terminal domain DY252_RS12975 PF00270 DEAD/DEAH box helicase DY252_RS12975 PF09382 RQC domain DY252_RS12980 PF00255 Glutathione peroxidase DY252_RS12985 PF00174 Oxidoreductase molybdopterin binding domain DY252_RS12990 PF01668 SmpB protein DY252_RS12995 PF00701 Dihydrodipicolinate synthetase family DY252_RS13000 PF10145 Phage-related minor tail protein DY252_RS13000 PF01464 Transglycosylase SLT domain DY252_RS13000 PF01551 Peptidase family M23 DY252_RS13015 PF01551 Peptidase family M23 DY252_RS13020 PF04608 Phosphatidylglycerophosphatase A DY252_RS13025 PF02464 Competence-damaged protein DY252_RS13025 PF00994 Probable molybdopterin binding domain DY252_RS13030 PF03364 Polyketide cyclase / dehydrase and lipid transport DY252_RS13035 PF04055 Radical SAM superfamily DY252_RS13040 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS13040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DY252_RS13045 PF02817 e3 binding domain DY252_RS13045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DY252_RS13045 PF00364 Biotin-requiring enzyme DY252_RS13050 PF00364 Biotin-requiring enzyme DY252_RS13050 PF02779 Transketolase, pyrimidine binding domain DY252_RS13050 PF02780 Transketolase, C-terminal domain DY252_RS13055 PF00676 Dehydrogenase E1 component DY252_RS13065 PF00113 Enolase, C-terminal TIM barrel domain DY252_RS13065 PF03952 Enolase, N-terminal domain DY252_RS13070 PF00793 DAHP synthetase I family DY252_RS13075 PF00117 Glutamine amidotransferase class-I DY252_RS13075 PF06418 CTP synthase N-terminus DY252_RS13085 PF00121 Triosephosphate isomerase DY252_RS13090 PF00639 PPIC-type PPIASE domain DY252_RS13095 PF00425 chorismate binding enzyme DY252_RS13095 PF04715 Anthranilate synthase component I, N terminal region DY252_RS13100 PF04748 Divergent polysaccharide deacetylase DY252_RS13105 PF00117 Glutamine amidotransferase class-I DY252_RS13110 PF02885 Glycosyl transferase family, helical bundle domain DY252_RS13110 PF00591 Glycosyl transferase family, a/b domain DY252_RS13115 PF00218 Indole-3-glycerol phosphate synthase DY252_RS13120 PF01967 MoaC family DY252_RS13125 PF01726 LexA DNA binding domain DY252_RS13125 PF00717 Peptidase S24-like DY252_RS13130 PF00753 Metallo-beta-lactamase superfamily DY252_RS13130 PF13567 Domain of unknown function (DUF4131) DY252_RS13130 PF03772 Competence protein DY252_RS13135 PF00749 tRNA synthetases class I (E and Q), catalytic domain DY252_RS13140 PF00285 Citrate synthase, C-terminal domain DY252_RS13150 PF01810 LysE type translocator DY252_RS13155 PF03466 LysR substrate binding domain DY252_RS13155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS13160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DY252_RS13165 PF02684 Lipid-A-disaccharide synthetase DY252_RS13170 PF17930 LpxI N-terminal domain DY252_RS13170 PF06230 LpxI C-terminal domain DY252_RS13175 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_RS13175 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DY252_RS13180 PF07977 FabA-like domain DY252_RS13185 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_RS13185 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DY252_RS13195 PF07244 Surface antigen variable number repeat DY252_RS13195 PF01103 Surface antigen DY252_RS13200 PF17820 PDZ domain DY252_RS13200 PF02163 Peptidase family M50 DY252_RS13205 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DY252_RS13205 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DY252_RS13205 PF13288 DXP reductoisomerase C-terminal domain DY252_RS13215 PF01255 Putative undecaprenyl diphosphate synthase DY252_RS13220 PF01765 Ribosome recycling factor DY252_RS13225 PF00696 Amino acid kinase family DY252_RS13230 PF00889 Elongation factor TS DY252_RS13235 PF00318 Ribosomal protein S2 DY252_RS13240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DY252_RS13240 PF07733 Bacterial DNA polymerase III alpha NTPase domain DY252_RS13240 PF14579 Helix-hairpin-helix motif DY252_RS13240 PF02811 PHP domain DY252_RS13245 PF00005 ABC transporter DY252_RS13250 PF02687 FtsX-like permease family DY252_RS13250 PF12704 MacB-like periplasmic core domain DY252_RS13255 PF03129 Anticodon binding domain DY252_RS13255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DY252_RS13275 PF12706 Beta-lactamase superfamily domain DY252_RS13275 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DY252_RS13275 PF17770 Ribonuclease J C-terminal domain DY252_RS13280 PF03309 Type III pantothenate kinase DY252_RS13285 PF02237 Biotin protein ligase C terminal domain DY252_RS13285 PF03099 Biotin/lipoate A/B protein ligase family DY252_RS13290 PF00361 Proton-conducting membrane transporter DY252_RS13295 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DY252_RS13295 PF00361 Proton-conducting membrane transporter DY252_RS13300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DY252_RS13300 PF00361 Proton-conducting membrane transporter DY252_RS13305 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DY252_RS13310 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DY252_RS13315 PF12838 4Fe-4S dicluster domain DY252_RS13320 PF00146 NADH dehydrogenase DY252_RS13325 PF00384 Molybdopterin oxidoreductase DY252_RS13325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DY252_RS13325 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DY252_RS13330 PF10531 SLBB domain DY252_RS13330 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DY252_RS13330 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DY252_RS13340 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DY252_RS13345 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DY252_RS13350 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DY252_RS13355 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DY252_RS13365 PF01706 FliG C-terminal domain DY252_RS13365 PF14841 FliG middle domain DY252_RS13365 PF14842 FliG N-terminal domain DY252_RS13385 PF00216 Bacterial DNA-binding protein DY252_RS13390 PF02190 ATP-dependent protease La (LON) substrate-binding domain DY252_RS13390 PF05362 Lon protease (S16) C-terminal proteolytic domain DY252_RS13390 PF00004 ATPase family associated with various cellular activities (AAA) DY252_RS13395 PF06689 ClpX C4-type zinc finger DY252_RS13395 PF10431 C-terminal, D2-small domain, of ClpB protein DY252_RS13395 PF07724 AAA domain (Cdc48 subfamily) DY252_RS13400 PF00574 Clp protease DY252_RS13405 PF05697 Bacterial trigger factor protein (TF) DY252_RS13405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DY252_RS13405 PF05698 Bacterial trigger factor protein (TF) C-terminus DY252_RS13420 PF03853 YjeF-related protein N-terminus DY252_RS13420 PF01256 Carbohydrate kinase DY252_RS13425 PF01266 FAD dependent oxidoreductase DY252_RS13430 PF00989 PAS fold DY252_RS13430 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS13430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS13435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DY252_RS13440 PF09278 MerR, DNA binding DY252_RS13440 PF00376 MerR family regulatory protein DY252_RS13445 PF00403 Heavy-metal-associated domain DY252_RS13450 PF00210 Ferritin-like domain DY252_RS13455 PF00210 Ferritin-like domain DY252_RS13460 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DY252_RS13465 PF00875 DNA photolyase DY252_RS13465 PF03441 FAD binding domain of DNA photolyase DY252_RS13485 PF01547 Bacterial extracellular solute-binding protein DY252_RS13490 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS13495 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS13500 PF17912 MalK OB fold domain DY252_RS13500 PF00005 ABC transporter DY252_RS13505 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS13505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS13505 PF00672 HAMP domain DY252_RS13510 PF00486 Transcriptional regulatory protein, C terminal DY252_RS13510 PF00072 Response regulator receiver domain DY252_RS13520 PF01593 Flavin containing amine oxidoreductase DY252_RS13535 PF00342 Phosphoglucose isomerase DY252_RS13540 PF00294 pfkB family carbohydrate kinase DY252_RS13555 PF00491 Arginase family DY252_RS13560 PF00171 Aldehyde dehydrogenase family DY252_RS13565 PF01381 Helix-turn-helix DY252_RS13565 PF07883 Cupin domain DY252_RS13570 PF00120 Glutamine synthetase, catalytic domain DY252_RS13575 PF00202 Aminotransferase class-III DY252_RS13595 PF01266 FAD dependent oxidoreductase DY252_RS13600 PF03313 Serine dehydratase alpha chain DY252_RS13605 PF00732 GMC oxidoreductase DY252_RS13605 PF05199 GMC oxidoreductase DY252_RS13610 PF00171 Aldehyde dehydrogenase family DY252_RS13615 PF00440 Bacterial regulatory proteins, tetR family DY252_RS13615 PF13977 BetI-type transcriptional repressor, C-terminal DY252_RS13620 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DY252_RS13625 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS13630 PF00005 ABC transporter DY252_RS13630 PF00571 CBS domain DY252_RS13640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS13640 PF03466 LysR substrate binding domain DY252_RS13650 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS13660 PF08402 TOBE domain DY252_RS13660 PF00005 ABC transporter DY252_RS13665 PF00202 Aminotransferase class-III DY252_RS13670 PF05853 beta-keto acid cleavage enzyme DY252_RS13675 PF00850 Histone deacetylase domain DY252_RS13680 PF01266 FAD dependent oxidoreductase DY252_RS13685 PF01546 Peptidase family M20/M25/M40 DY252_RS13685 PF07687 Peptidase dimerisation domain DY252_RS13690 PF01042 Endoribonuclease L-PSP DY252_RS13710 PF02423 Ornithine cyclodeaminase/mu-crystallin family DY252_RS13720 PF07364 Metallopeptidase family M81 DY252_RS13720 PF07171 MlrC C-terminus DY252_RS13725 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS13730 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS13740 PF01380 SIS domain DY252_RS13740 PF01418 Helix-turn-helix domain, rpiR family DY252_RS13750 PF01103 Surface antigen DY252_RS13750 PF17243 POTRA domain TamA domain 1 DY252_RS13770 PF02371 Transposase IS116/IS110/IS902 family DY252_RS13770 PF01548 Transposase DY252_RS13790 PF10397 Adenylosuccinate lyase C-terminus DY252_RS13790 PF00206 Lyase DY252_RS13795 PF00108 Thiolase, N-terminal domain DY252_RS13795 PF02803 Thiolase, C-terminal domain DY252_RS13800 PF01144 Coenzyme A transferase DY252_RS13805 PF01144 Coenzyme A transferase DY252_RS13815 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DY252_RS13815 PF00775 Dioxygenase DY252_RS13825 PF12146 Serine aminopeptidase, S33 DY252_RS13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS13830 PF03466 LysR substrate binding domain DY252_RS13835 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS13845 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS13855 PF02272 DHHA1 domain DY252_RS13855 PF01411 tRNA synthetases class II (A) DY252_RS13855 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DY252_RS13860 PF01266 FAD dependent oxidoreductase DY252_RS13860 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DY252_RS13885 PF07690 Major Facilitator Superfamily DY252_RS13895 PF08021 Siderophore-interacting FAD-binding domain DY252_RS13895 PF04954 Siderophore-interacting protein DY252_RS13905 PF08240 Alcohol dehydrogenase GroES-like domain DY252_RS13905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DY252_RS13930 PF00156 Phosphoribosyl transferase domain DY252_RS13945 PF01494 FAD binding domain DY252_RS13970 PF00128 Alpha amylase, catalytic domain DY252_RS13975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DY252_RS13975 PF00205 Thiamine pyrophosphate enzyme, central domain DY252_RS13975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DY252_RS13985 PF00583 Acetyltransferase (GNAT) family DY252_RS13995 PF12833 Helix-turn-helix domain DY252_RS13995 PF12852 Cupin DY252_RS14000 PF07690 Major Facilitator Superfamily DY252_RS14020 PF01807 CHC2 zinc finger DY252_RS14020 PF08275 DNA primase catalytic core, N-terminal domain DY252_RS14020 PF00772 DnaB-like helicase N terminal domain DY252_RS14035 PF00392 Bacterial regulatory proteins, gntR family DY252_RS14035 PF07729 FCD domain DY252_RS14040 PF02653 Branched-chain amino acid transport system / permease component DY252_RS14045 PF02653 Branched-chain amino acid transport system / permease component DY252_RS14050 PF00005 ABC transporter DY252_RS14055 PF13407 Periplasmic binding protein domain DY252_RS14060 PF01263 Aldose 1-epimerase DY252_RS14070 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS14080 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS14085 PF07729 FCD domain DY252_RS14085 PF00392 Bacterial regulatory proteins, gntR family DY252_RS14090 PF12833 Helix-turn-helix domain DY252_RS14090 PF01965 DJ-1/PfpI family DY252_RS14110 PF05114 Protein of unknown function (DUF692) DY252_RS14170 PF01433 Peptidase family M1 domain DY252_RS14170 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DY252_RS14170 PF11940 Domain of unknown function (DUF3458) Ig-like fold DY252_RS14175 PF00072 Response regulator receiver domain DY252_RS14175 PF00196 Bacterial regulatory proteins, luxR family DY252_RS14185 PF12833 Helix-turn-helix domain DY252_RS14190 PF01810 LysE type translocator DY252_RS14210 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS14210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS14220 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS14225 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS14235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS14235 PF08269 Cache domain DY252_RS14240 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DY252_RS14240 PF12833 Helix-turn-helix domain DY252_RS14245 PF07715 TonB-dependent Receptor Plug Domain DY252_RS14245 PF00593 TonB dependent receptor DY252_RS14250 PF01497 Periplasmic binding protein DY252_RS14265 PF02472 Biopolymer transport protein ExbD/TolR DY252_RS14270 PF02472 Biopolymer transport protein ExbD/TolR DY252_RS14275 PF01618 MotA/TolQ/ExbB proton channel family DY252_RS14290 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DY252_RS14295 PF01467 Cytidylyltransferase-like DY252_RS14300 PF00521 DNA gyrase/topoisomerase IV, subunit A DY252_RS14300 PF03989 DNA gyrase C-terminal domain, beta-propeller DY252_RS14330 PF01979 Amidohydrolase family DY252_RS14360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DY252_RS14360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DY252_RS14365 PF03466 LysR substrate binding domain DY252_RS14365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS14375 PF00155 Aminotransferase class I and II DY252_RS14380 PF00543 Nitrogen regulatory protein P-II DY252_RS14385 PF03951 Glutamine synthetase, beta-Grasp domain DY252_RS14385 PF00120 Glutamine synthetase, catalytic domain DY252_RS14390 PF13181 Tetratricopeptide repeat DY252_RS14395 PF08448 PAS fold DY252_RS14395 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS14395 PF13426 PAS domain DY252_RS14395 PF00563 EAL domain DY252_RS14395 PF08447 PAS fold DY252_RS14395 PF05231 MASE1 DY252_RS14405 PF02566 OsmC-like protein DY252_RS14420 PF00962 Adenosine/AMP deaminase DY252_RS14425 PF13181 Tetratricopeptide repeat DY252_RS14440 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS14440 PF13188 PAS domain DY252_RS14440 PF00563 EAL domain DY252_RS14440 PF03707 Bacterial signalling protein N terminal repeat DY252_RS14450 PF05368 NmrA-like family DY252_RS14455 PF07729 FCD domain DY252_RS14455 PF00392 Bacterial regulatory proteins, gntR family DY252_RS14460 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS14460 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DY252_RS14465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS14465 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DY252_RS14470 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS14475 PF12833 Helix-turn-helix domain DY252_RS14490 PF03466 LysR substrate binding domain DY252_RS14490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS14495 PF13458 Periplasmic binding protein DY252_RS14500 PF00005 ABC transporter DY252_RS14500 PF12399 Branched-chain amino acid ATP-binding cassette transporter DY252_RS14515 PF11862 Domain of unknown function (DUF3382) DY252_RS14515 PF02653 Branched-chain amino acid transport system / permease component DY252_RS14535 PF03707 Bacterial signalling protein N terminal repeat DY252_RS14535 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS14535 PF00563 EAL domain DY252_RS14575 PF03070 TENA/THI-4/PQQC family DY252_RS14580 PF04384 Iron-sulphur cluster assembly DY252_RS14585 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_RS14590 PF00012 Hsp70 protein DY252_RS14595 PF07743 HSCB C-terminal oligomerisation domain DY252_RS14595 PF00226 DnaJ domain DY252_RS14600 PF01521 Iron-sulphur cluster biosynthesis DY252_RS14605 PF01592 NifU-like N terminal domain DY252_RS14610 PF00266 Aminotransferase class-V DY252_RS14615 PF00266 Aminotransferase class-V DY252_RS14620 PF02082 Transcriptional regulator DY252_RS14625 PF06426 Serine acetyltransferase, N-terminal DY252_RS14625 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_RS14630 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DY252_RS14635 PF03702 Anhydro-N-acetylmuramic acid kinase DY252_RS14640 PF00579 tRNA synthetases class I (W and Y) DY252_RS14650 PF08335 GlnD PII-uridylyltransferase DY252_RS14650 PF03710 Glutamate-ammonia ligase adenylyltransferase DY252_RS14655 PF00578 AhpC/TSA family DY252_RS14665 PF04305 Protein of unknown function (DUF455) DY252_RS14670 PF00107 Zinc-binding dehydrogenase DY252_RS14670 PF08240 Alcohol dehydrogenase GroES-like domain DY252_RS14675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DY252_RS14675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DY252_RS14680 PF06029 AlkA N-terminal domain DY252_RS14680 PF00730 HhH-GPD superfamily base excision DNA repair protein DY252_RS14680 PF12833 Helix-turn-helix domain DY252_RS14680 PF02805 Metal binding domain of Ada DY252_RS14685 PF00672 HAMP domain DY252_RS14685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS14710 PF17092 Penicillin-binding protein OB-like domain DY252_RS14710 PF00912 Transglycosylase DY252_RS14710 PF00905 Penicillin binding protein transpeptidase domain DY252_RS14715 PF11741 AMIN domain DY252_RS14715 PF01520 N-acetylmuramoyl-L-alanine amidase DY252_RS14720 PF10150 Ribonuclease E/G family DY252_RS14720 PF12111 Polyribonucleotide phosphorylase C terminal DY252_RS14720 PF00575 S1 RNA binding domain DY252_RS14725 PF00155 Aminotransferase class I and II DY252_RS14735 PF01435 Peptidase family M48 DY252_RS14745 PF13462 Thioredoxin DY252_RS14745 PF06965 Na+/H+ antiporter 1 DY252_RS14750 PF05690 Thiazole biosynthesis protein ThiG DY252_RS14750 PF02597 ThiS family DY252_RS14755 PF01220 Dehydroquinase class II DY252_RS14760 PF00364 Biotin-requiring enzyme DY252_RS14765 PF02785 Biotin carboxylase C-terminal domain DY252_RS14765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DY252_RS14765 PF00289 Biotin carboxylase, N-terminal domain DY252_RS14770 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DY252_RS14780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_RS14780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_RS14780 PF01842 ACT domain DY252_RS14790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS14790 PF08269 Cache domain DY252_RS14810 PF02617 ATP-dependent Clp protease adaptor protein ClpS DY252_RS14825 PF07943 Penicillin-binding protein 5, C-terminal domain DY252_RS14825 PF00768 D-alanyl-D-alanine carboxypeptidase DY252_RS14830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DY252_RS14830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DY252_RS14830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DY252_RS14830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DY252_RS14835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DY252_RS14835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DY252_RS14835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DY252_RS14840 PF00483 Nucleotidyl transferase DY252_RS14845 PF01556 DnaJ C terminal domain DY252_RS14845 PF00684 DnaJ central domain DY252_RS14845 PF00226 DnaJ domain DY252_RS14855 PF13614 AAA domain DY252_RS14865 PF01266 FAD dependent oxidoreductase DY252_RS14870 PF03537 Glycoside-hydrolase family GH114 DY252_RS14875 PF01323 DSBA-like thioredoxin domain DY252_RS14880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DY252_RS14880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DY252_RS14885 PF00205 Thiamine pyrophosphate enzyme, central domain DY252_RS14885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DY252_RS14885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DY252_RS14895 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DY252_RS14895 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DY252_RS14905 PF04972 BON domain DY252_RS14910 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DY252_RS14910 PF14850 DNA-binding domain of Proline dehydrogenase DY252_RS14910 PF01619 Proline dehydrogenase DY252_RS14910 PF00171 Aldehyde dehydrogenase family DY252_RS14915 PF01037 Lrp/AsnC ligand binding domain DY252_RS14920 PF01323 DSBA-like thioredoxin domain DY252_RS14930 PF01039 Carboxyl transferase domain DY252_RS14935 PF00378 Enoyl-CoA hydratase/isomerase DY252_RS14940 PF18140 Propionyl-coenzyme A carboxylase BT domain DY252_RS14940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DY252_RS14940 PF02785 Biotin carboxylase C-terminal domain DY252_RS14940 PF00289 Biotin carboxylase, N-terminal domain DY252_RS14940 PF00364 Biotin-requiring enzyme DY252_RS14945 PF00682 HMGL-like DY252_RS14965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS14965 PF00672 HAMP domain DY252_RS14975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DY252_RS14975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DY252_RS15000 PF03976 Polyphosphate kinase 2 (PPK2) DY252_RS15005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DY252_RS15005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DY252_RS15010 PF13180 PDZ domain DY252_RS15010 PF03572 Peptidase family S41 DY252_RS15015 PF12806 Acetyl-CoA dehydrogenase C-terminal like DY252_RS15015 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_RS15015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_RS15015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_RS15020 PF03739 Lipopolysaccharide export system permease LptF/LptG DY252_RS15030 PF03968 OstA-like protein DY252_RS15030 PF04453 LPS transport system D DY252_RS15035 PF00639 PPIC-type PPIASE domain DY252_RS15035 PF09312 SurA N-terminal domain DY252_RS15040 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DY252_RS15045 PF00398 Ribosomal RNA adenine dimethylase DY252_RS15050 PF00625 Guanylate kinase DY252_RS15055 PF03755 YicC-like family, N-terminal region DY252_RS15055 PF08340 Domain of unknown function (DUF1732) DY252_RS15060 PF00106 short chain dehydrogenase DY252_RS15065 PF02618 YceG-like family DY252_RS15070 PF00109 Beta-ketoacyl synthase, N-terminal domain DY252_RS15070 PF02801 Beta-ketoacyl synthase, C-terminal domain DY252_RS15075 PF00550 Phosphopantetheine attachment site DY252_RS15085 PF00698 Acyl transferase domain DY252_RS15090 PF01250 Ribosomal protein S6 DY252_RS15095 PF01084 Ribosomal protein S18 DY252_RS15105 PF03948 Ribosomal protein L9, C-terminal domain DY252_RS15105 PF01281 Ribosomal protein L9, N-terminal domain DY252_RS15110 PF00772 DnaB-like helicase N terminal domain DY252_RS15110 PF03796 DnaB-like helicase C terminal domain DY252_RS15115 PF01168 Alanine racemase, N-terminal domain DY252_RS15115 PF00842 Alanine racemase, C-terminal domain DY252_RS15120 PF02405 Permease MlaE DY252_RS15125 PF00005 ABC transporter DY252_RS15130 PF06745 KaiC DY252_RS15130 PF18073 Rubredoxin metal binding domain DY252_RS15140 PF00156 Phosphoribosyl transferase domain DY252_RS15140 PF13537 Glutamine amidotransferase domain DY252_RS15145 PF00106 short chain dehydrogenase DY252_RS15155 PF00005 ABC transporter DY252_RS15180 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DY252_RS15180 PF01926 50S ribosome-binding GTPase DY252_RS15185 PF13360 PQQ-like domain DY252_RS15215 PF00589 Phage integrase family DY252_RS15215 PF02899 Phage integrase, N-terminal SAM-like domain DY252_RS15245 PF07732 Multicopper oxidase DY252_RS15245 PF00394 Multicopper oxidase DY252_RS15245 PF07731 Multicopper oxidase DY252_RS15250 PF05275 Copper resistance protein B precursor (CopB) DY252_RS15275 PF04945 YHS domain DY252_RS15290 PF01252 Signal peptidase (SPase) II DY252_RS15300 PF13411 MerR HTH family regulatory protein DY252_RS15310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DY252_RS15315 PF00291 Pyridoxal-phosphate dependent enzyme DY252_RS15320 PF00011 Hsp20/alpha crystallin family DY252_RS15325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DY252_RS15330 PF00118 TCP-1/cpn60 chaperonin family DY252_RS15335 PF00166 Chaperonin 10 Kd subunit DY252_RS15345 PF13411 MerR HTH family regulatory protein DY252_RS15355 PF01252 Signal peptidase (SPase) II DY252_RS15370 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DY252_RS15375 PF00483 Nucleotidyl transferase DY252_RS15380 PF04321 RmlD substrate binding domain DY252_RS15385 PF16363 GDP-mannose 4,6 dehydratase DY252_RS15395 PF01380 SIS domain DY252_RS15400 PF12804 MobA-like NTP transferase domain DY252_RS15400 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_RS15405 PF13419 Haloacid dehalogenase-like hydrolase DY252_RS15410 PF00920 Dehydratase family DY252_RS15415 PF02653 Branched-chain amino acid transport system / permease component DY252_RS15420 PF00005 ABC transporter DY252_RS15425 PF13407 Periplasmic binding protein domain DY252_RS15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS15430 PF03466 LysR substrate binding domain DY252_RS15440 PF13538 UvrD-like helicase C-terminal domain DY252_RS15450 PF01641 SelR domain DY252_RS15460 PF00300 Histidine phosphatase superfamily (branch 1) DY252_RS15465 PF12706 Beta-lactamase superfamily domain DY252_RS15470 PF08402 TOBE domain DY252_RS15470 PF00005 ABC transporter DY252_RS15475 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS15480 PF13416 Bacterial extracellular solute-binding protein DY252_RS15485 PF00455 DeoR C terminal sensor domain DY252_RS15485 PF08220 DeoR-like helix-turn-helix domain DY252_RS15565 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_RS15570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS15570 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS15570 PF00672 HAMP domain DY252_RS15575 PF00072 Response regulator receiver domain DY252_RS15575 PF00486 Transcriptional regulatory protein, C terminal DY252_RS15590 PF02690 Na+/Pi-cotransporter DY252_RS15595 PF01266 FAD dependent oxidoreductase DY252_RS15595 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DY252_RS15600 PF13537 Glutamine amidotransferase domain DY252_RS15600 PF00733 Asparagine synthase DY252_RS15605 PF02954 Bacterial regulatory protein, Fis family DY252_RS15605 PF01590 GAF domain DY252_RS15605 PF00158 Sigma-54 interaction domain DY252_RS15610 PF00171 Aldehyde dehydrogenase family DY252_RS15620 PF03601 Conserved hypothetical protein 698 DY252_RS15625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS15625 PF03466 LysR substrate binding domain DY252_RS15630 PF01654 Cytochrome bd terminal oxidase subunit I DY252_RS15635 PF02322 Cytochrome bd terminal oxidase subunit II DY252_RS15645 PF00155 Aminotransferase class I and II DY252_RS15655 PF01507 Phosphoadenosine phosphosulfate reductase family DY252_RS15660 PF00009 Elongation factor Tu GTP binding domain DY252_RS15675 PF01066 CDP-alcohol phosphatidyltransferase DY252_RS15690 PF01541 GIY-YIG catalytic domain DY252_RS15705 PF01081 KDPG and KHG aldolase DY252_RS15710 PF05035 2-keto-3-deoxy-galactonokinase DY252_RS15720 PF00141 Peroxidase DY252_RS15755 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DY252_RS15795 PF05544 Proline racemase DY252_RS15800 PF07729 FCD domain DY252_RS15800 PF00392 Bacterial regulatory proteins, gntR family DY252_RS15805 PF05544 Proline racemase DY252_RS15810 PF01266 FAD dependent oxidoreductase DY252_RS15815 PF00701 Dihydrodipicolinate synthetase family DY252_RS15820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DY252_RS15820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DY252_RS15830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DY252_RS15830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DY252_RS15840 PF00171 Aldehyde dehydrogenase family DY252_RS15850 PF07690 Major Facilitator Superfamily DY252_RS15855 PF00593 TonB dependent receptor DY252_RS15855 PF07715 TonB-dependent Receptor Plug Domain DY252_RS15870 PF01266 FAD dependent oxidoreductase DY252_RS15870 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DY252_RS15875 PF00005 ABC transporter DY252_RS15875 PF17912 MalK OB fold domain DY252_RS15880 PF00005 ABC transporter DY252_RS15880 PF17912 MalK OB fold domain DY252_RS15885 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS15890 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS15910 PF12804 MobA-like NTP transferase domain DY252_RS15915 PF00893 Small Multidrug Resistance protein DY252_RS15920 PF03466 LysR substrate binding domain DY252_RS15920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS15935 PF01979 Amidohydrolase family DY252_RS15945 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS15950 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS15955 PF00005 ABC transporter DY252_RS15965 PF00202 Aminotransferase class-III DY252_RS15970 PF00440 Bacterial regulatory proteins, tetR family DY252_RS15970 PF08362 YcdC-like protein, C-terminal region DY252_RS15980 PF07687 Peptidase dimerisation domain DY252_RS15980 PF01546 Peptidase family M20/M25/M40 DY252_RS15985 PF01180 Dihydroorotate dehydrogenase DY252_RS15990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DY252_RS15990 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS15995 PF03061 Thioesterase superfamily DY252_RS16000 PF05343 M42 glutamyl aminopeptidase DY252_RS16010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_RS16010 PF00005 ABC transporter DY252_RS16015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_RS16015 PF00005 ABC transporter DY252_RS16020 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS16025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_RS16035 PF07687 Peptidase dimerisation domain DY252_RS16035 PF01546 Peptidase family M20/M25/M40 DY252_RS16045 PF01235 Sodium:alanine symporter family DY252_RS16050 PF16325 Peptidase family U32 C-terminal domain DY252_RS16050 PF01136 Peptidase family U32 DY252_RS16065 PF03600 Citrate transporter DY252_RS16070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DY252_RS16070 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DY252_RS16085 PF08450 SMP-30/Gluconolactonase/LRE-like region DY252_RS16090 PF00005 ABC transporter DY252_RS16100 PF01497 Periplasmic binding protein DY252_RS16105 PF01032 FecCD transport family DY252_RS16130 PF00700 Bacterial flagellin C-terminal helical region DY252_RS16130 PF00669 Bacterial flagellin N-terminal helical region DY252_RS16135 PF01370 NAD dependent epimerase/dehydratase family DY252_RS16140 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS16150 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS16155 PF00701 Dihydrodipicolinate synthetase family DY252_RS16165 PF08450 SMP-30/Gluconolactonase/LRE-like region DY252_RS16170 PF07729 FCD domain DY252_RS16170 PF00392 Bacterial regulatory proteins, gntR family DY252_RS16175 PF01263 Aldose 1-epimerase DY252_RS16180 PF00392 Bacterial regulatory proteins, gntR family DY252_RS16180 PF07729 FCD domain DY252_RS16185 PF13419 Haloacid dehalogenase-like hydrolase DY252_RS16190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DY252_RS16190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DY252_RS16195 PF00873 AcrB/AcrD/AcrF family DY252_RS16200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DY252_RS16200 PF00529 HlyD membrane-fusion protein of T1SS DY252_RS16215 PF07715 TonB-dependent Receptor Plug Domain DY252_RS16215 PF00593 TonB dependent receptor DY252_RS16225 PF04542 Sigma-70 region 2 DY252_RS16225 PF08281 Sigma-70, region 4 DY252_RS16225 PF12680 SnoaL-like domain DY252_RS16245 PF00797 N-acetyltransferase DY252_RS16250 PF01063 Amino-transferase class IV DY252_RS16260 PF03466 LysR substrate binding domain DY252_RS16260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS16265 PF00892 EamA-like transporter family DY252_RS16300 PF01180 Dihydroorotate dehydrogenase DY252_RS16305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DY252_RS16310 PF01370 NAD dependent epimerase/dehydratase family DY252_RS16330 PF03466 LysR substrate binding domain DY252_RS16330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS16335 PF02567 Phenazine biosynthesis-like protein DY252_RS16345 PF07804 HipA-like C-terminal domain DY252_RS16345 PF13657 HipA N-terminal domain DY252_RS16365 PF12728 Helix-turn-helix domain DY252_RS16435 PF07484 Phage Tail Collar Domain DY252_RS16445 PF07484 Phage Tail Collar Domain DY252_RS16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS16500 PF00672 HAMP domain DY252_RS16500 PF17149 Periplasmic sensor domain found in signal transduction proteins DY252_RS16500 PF00072 Response regulator receiver domain DY252_RS16500 PF01627 Hpt domain DY252_RS16500 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS16505 PF00459 Inositol monophosphatase family DY252_RS16510 PF01063 Amino-transferase class IV DY252_RS16530 PF01619 Proline dehydrogenase DY252_RS16535 PF01921 tRNA synthetases class I (K) DY252_RS16540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS16540 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS16540 PF00989 PAS fold DY252_RS16545 PF00563 EAL domain DY252_RS16545 PF03707 Bacterial signalling protein N terminal repeat DY252_RS16545 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS16550 PF08269 Cache domain DY252_RS16550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS16565 PF01047 MarR family DY252_RS16570 PF07859 alpha/beta hydrolase fold DY252_RS16575 PF02566 OsmC-like protein DY252_RS16590 PF09335 SNARE associated Golgi protein DY252_RS16600 PF01810 LysE type translocator DY252_RS16605 PF02311 AraC-like ligand binding domain DY252_RS16605 PF12833 Helix-turn-helix domain DY252_RS16610 PF13307 Helicase C-terminal domain DY252_RS16610 PF04851 Type III restriction enzyme, res subunit DY252_RS16615 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DY252_RS16615 PF03033 Glycosyltransferase family 28 N-terminal domain DY252_RS16635 PF03729 Short repeat of unknown function (DUF308) DY252_RS16640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS16640 PF03466 LysR substrate binding domain DY252_RS16645 PF00892 EamA-like transporter family DY252_RS16660 PF00563 EAL domain DY252_RS16660 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS16660 PF08448 PAS fold DY252_RS16660 PF08447 PAS fold DY252_RS16670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DY252_RS16670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DY252_RS16685 PF04102 SlyX DY252_RS16695 PF03466 LysR substrate binding domain DY252_RS16695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS16700 PF07690 Major Facilitator Superfamily DY252_RS16705 PF01272 Transcription elongation factor, GreA/GreB, C-term DY252_RS16705 PF03449 Transcription elongation factor, N-terminal DY252_RS16710 PF00698 Acyl transferase domain DY252_RS16710 PF08240 Alcohol dehydrogenase GroES-like domain DY252_RS16710 PF16197 Ketoacyl-synthetase C-terminal extension DY252_RS16710 PF08990 Erythronolide synthase docking DY252_RS16710 PF00109 Beta-ketoacyl synthase, N-terminal domain DY252_RS16710 PF02801 Beta-ketoacyl synthase, C-terminal domain DY252_RS16710 PF00550 Phosphopantetheine attachment site DY252_RS16710 PF14765 Polyketide synthase dehydratase DY252_RS16710 PF08659 KR domain DY252_RS16715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS16715 PF03466 LysR substrate binding domain DY252_RS16720 PF00270 DEAD/DEAH box helicase DY252_RS16720 PF08482 ATP-dependent helicase C-terminal DY252_RS16720 PF00271 Helicase conserved C-terminal domain DY252_RS16720 PF04408 Helicase associated domain (HA2) DY252_RS16745 PF13614 AAA domain DY252_RS16745 PF02706 Chain length determinant protein DY252_RS16745 PF13807 G-rich domain on putative tyrosine kinase DY252_RS16755 PF03808 Glycosyl transferase WecB/TagA/CpsF family DY252_RS16790 PF13439 Glycosyltransferase Family 4 DY252_RS16790 PF00534 Glycosyl transferases group 1 DY252_RS16800 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DY252_RS16800 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DY252_RS16800 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DY252_RS16810 PF08264 Anticodon-binding domain of tRNA DY252_RS16810 PF09334 tRNA synthetases class I (M) DY252_RS16810 PF13603 Leucyl-tRNA synthetase, Domain 2 DY252_RS16840 PF00700 Bacterial flagellin C-terminal helical region DY252_RS16840 PF00669 Bacterial flagellin N-terminal helical region DY252_RS16840 PF07196 Flagellin hook IN motif DY252_RS16845 PF01209 ubiE/COQ5 methyltransferase family DY252_RS16855 PF01242 6-pyruvoyl tetrahydropterin synthase DY252_RS16860 PF04055 Radical SAM superfamily DY252_RS16875 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DY252_RS16905 PF01066 CDP-alcohol phosphatidyltransferase DY252_RS16910 PF02666 Phosphatidylserine decarboxylase DY252_RS16925 PF03641 Possible lysine decarboxylase DY252_RS16935 PF13192 Thioredoxin domain DY252_RS16935 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS16940 PF08220 DeoR-like helix-turn-helix domain DY252_RS16940 PF00455 DeoR C terminal sensor domain DY252_RS16945 PF08402 TOBE domain DY252_RS16945 PF00005 ABC transporter DY252_RS16950 PF13416 Bacterial extracellular solute-binding protein DY252_RS16955 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS16960 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS16965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS16965 PF03466 LysR substrate binding domain DY252_RS16970 PF05199 GMC oxidoreductase DY252_RS16970 PF00732 GMC oxidoreductase DY252_RS16980 PF03150 Di-haem cytochrome c peroxidase DY252_RS16980 PF00034 Cytochrome c DY252_RS16990 PF14864 Alkyl sulfatase C-terminal DY252_RS16990 PF14863 Alkyl sulfatase dimerisation DY252_RS16990 PF00753 Metallo-beta-lactamase superfamily DY252_RS16995 PF07690 Major Facilitator Superfamily DY252_RS17000 PF13533 Biotin-lipoyl like DY252_RS17015 PF02567 Phenazine biosynthesis-like protein DY252_RS17035 PF00180 Isocitrate/isopropylmalate dehydrogenase DY252_RS17050 PF08281 Sigma-70, region 4 DY252_RS17050 PF04542 Sigma-70 region 2 DY252_RS17065 PF12833 Helix-turn-helix domain DY252_RS17065 PF14525 AraC-binding-like domain DY252_RS17085 PF05726 Pirin C-terminal cupin domain DY252_RS17085 PF02678 Pirin DY252_RS17090 PF03358 NADPH-dependent FMN reductase DY252_RS17095 PF03009 Glycerophosphoryl diester phosphodiesterase family DY252_RS17105 PF00004 ATPase family associated with various cellular activities (AAA) DY252_RS17105 PF01434 Peptidase family M41 DY252_RS17105 PF17862 AAA+ lid domain DY252_RS17110 PF12833 Helix-turn-helix domain DY252_RS17115 PF08362 YcdC-like protein, C-terminal region DY252_RS17115 PF00440 Bacterial regulatory proteins, tetR family DY252_RS17125 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS17135 PF08402 TOBE domain DY252_RS17135 PF00005 ABC transporter DY252_RS17145 PF00171 Aldehyde dehydrogenase family DY252_RS17155 PF10011 Predicted membrane protein (DUF2254) DY252_RS17170 PF01411 tRNA synthetases class II (A) DY252_RS17170 PF02272 DHHA1 domain DY252_RS17170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DY252_RS17185 PF07043 Protein of unknown function (DUF1328) DY252_RS17205 PF00154 recA bacterial DNA recombination protein DY252_RS17210 PF08753 NikR C terminal nickel binding domain DY252_RS17210 PF01402 Ribbon-helix-helix protein, copG family DY252_RS17255 PF01699 Sodium/calcium exchanger protein DY252_RS17260 PF13188 PAS domain DY252_RS17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS17260 PF08448 PAS fold DY252_RS17260 PF00072 Response regulator receiver domain DY252_RS17260 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS17265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS17265 PF08269 Cache domain DY252_RS17270 PF01312 FlhB HrpN YscU SpaS Family DY252_RS17275 PF01311 Bacterial export proteins, family 1 DY252_RS17280 PF01313 Bacterial export proteins, family 3 DY252_RS17285 PF02049 Flagellar hook-basal body complex protein FliE DY252_RS17290 PF00460 Flagella basal body rod protein DY252_RS17290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DY252_RS17295 PF00460 Flagella basal body rod protein DY252_RS17300 PF02599 Global regulator protein family DY252_RS17305 PF01312 FlhB HrpN YscU SpaS Family DY252_RS17320 PF00813 FliP family DY252_RS17325 PF01266 FAD dependent oxidoreductase DY252_RS17340 PF13677 Membrane MotB of proton-channel complex MotA/MotB DY252_RS17340 PF00691 OmpA family DY252_RS17355 PF00072 Response regulator receiver domain DY252_RS17370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DY252_RS17370 PF02154 Flagellar motor switch protein FliM DY252_RS17375 PF03748 Flagellar basal body-associated protein FliL DY252_RS17380 PF00460 Flagella basal body rod protein DY252_RS17380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DY252_RS17385 PF00460 Flagella basal body rod protein DY252_RS17385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DY252_RS17395 PF02107 Flagellar L-ring protein DY252_RS17400 PF01258 Prokaryotic dksA/traR C4-type zinc finger DY252_RS17405 PF10768 Class II flagellar assembly regulator DY252_RS17415 PF02119 Flagellar P-ring protein DY252_RS17420 PF10135 Rod binding protein DY252_RS17430 PF07196 Flagellin hook IN motif DY252_RS17430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DY252_RS17435 PF00700 Bacterial flagellin C-terminal helical region DY252_RS17435 PF00669 Bacterial flagellin N-terminal helical region DY252_RS17440 PF02623 FliW protein DY252_RS17445 PF00669 Bacterial flagellin N-terminal helical region DY252_RS17445 PF00700 Bacterial flagellin C-terminal helical region DY252_RS17450 PF00669 Bacterial flagellin N-terminal helical region DY252_RS17450 PF07196 Flagellin hook IN motif DY252_RS17450 PF00700 Bacterial flagellin C-terminal helical region DY252_RS17455 PF07196 Flagellin hook IN motif DY252_RS17455 PF00669 Bacterial flagellin N-terminal helical region DY252_RS17455 PF00700 Bacterial flagellin C-terminal helical region DY252_RS17460 PF00700 Bacterial flagellin C-terminal helical region DY252_RS17460 PF07196 Flagellin hook IN motif DY252_RS17460 PF00669 Bacterial flagellin N-terminal helical region DY252_RS17465 PF00700 Bacterial flagellin C-terminal helical region DY252_RS17465 PF00669 Bacterial flagellin N-terminal helical region DY252_RS17480 PF02561 Flagellar protein FliS DY252_RS17490 PF13860 FlgD Ig-like domain DY252_RS17490 PF03963 Flagellar hook capping protein - N-terminal region DY252_RS17490 PF13861 FlgD Tudor-like domain DY252_RS17495 PF07559 Flagellar basal body protein FlaE DY252_RS17495 PF00460 Flagella basal body rod protein DY252_RS17495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DY252_RS17500 PF01514 Secretory protein of YscJ/FliF family DY252_RS17500 PF08345 Flagellar M-ring protein C-terminal DY252_RS17510 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DY252_RS17515 PF01618 MotA/TolQ/ExbB proton channel family DY252_RS17520 PF02954 Bacterial regulatory protein, Fis family DY252_RS17520 PF00158 Sigma-54 interaction domain DY252_RS17525 PF00771 FHIPEP family DY252_RS17535 PF10609 NUBPL iron-transfer P-loop NTPase DY252_RS17550 PF18331 PKHD-type hydroxylase C-terminal domain DY252_RS17550 PF13640 2OG-Fe(II) oxygenase superfamily DY252_RS17555 PF00005 ABC transporter DY252_RS17560 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS17565 PF13416 Bacterial extracellular solute-binding protein DY252_RS17570 PF03741 Integral membrane protein TerC family DY252_RS17590 PF18269 T3SS EscN ATPase C-terminal domain DY252_RS17590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DY252_RS17590 PF02874 ATP synthase alpha/beta family, beta-barrel domain DY252_RS17595 PF00486 Transcriptional regulatory protein, C terminal DY252_RS17595 PF00072 Response regulator receiver domain DY252_RS17605 PF03705 CheR methyltransferase, all-alpha domain DY252_RS17605 PF01739 CheR methyltransferase, SAM binding domain DY252_RS17610 PF01339 CheB methylesterase DY252_RS17610 PF00072 Response regulator receiver domain DY252_RS17615 PF01584 CheW-like domain DY252_RS17615 PF00072 Response regulator receiver domain DY252_RS17615 PF01627 Hpt domain DY252_RS17615 PF02895 Signal transducing histidine kinase, homodimeric domain DY252_RS17615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS17625 PF01627 Hpt domain DY252_RS17625 PF00072 Response regulator receiver domain DY252_RS17625 PF02895 Signal transducing histidine kinase, homodimeric domain DY252_RS17625 PF01584 CheW-like domain DY252_RS17625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS17630 PF10090 Histidine phosphotransferase C-terminal domain DY252_RS17645 PF04055 Radical SAM superfamily DY252_RS17645 PF06463 Molybdenum Cofactor Synthesis C DY252_RS17670 PF00892 EamA-like transporter family DY252_RS17675 PF00462 Glutaredoxin DY252_RS17680 PF00924 Mechanosensitive ion channel DY252_RS17690 PF00163 Ribosomal protein S4/S9 N-terminal domain DY252_RS17690 PF01479 S4 domain DY252_RS17705 PF00106 short chain dehydrogenase DY252_RS17710 PF08502 LeuA allosteric (dimerisation) domain DY252_RS17710 PF00682 HMGL-like DY252_RS17730 PF07690 Major Facilitator Superfamily DY252_RS17745 PF13411 MerR HTH family regulatory protein DY252_RS17750 PF02627 Carboxymuconolactone decarboxylase family DY252_RS17755 PF01406 tRNA synthetases class I (C) catalytic domain DY252_RS17755 PF09190 DALR domain DY252_RS17760 PF00749 tRNA synthetases class I (E and Q), catalytic domain DY252_RS17765 PF00795 Carbon-nitrogen hydrolase DY252_RS17765 PF02540 NAD synthase DY252_RS17770 PF01906 Putative heavy-metal-binding DY252_RS17775 PF01906 Putative heavy-metal-binding DY252_RS17790 PF01474 Class-II DAHP synthetase family DY252_RS17805 PF01205 Uncharacterized protein family UPF0029 DY252_RS17805 PF09186 Domain of unknown function (DUF1949) DY252_RS17810 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DY252_RS17810 PF00356 Bacterial regulatory proteins, lacI family DY252_RS17815 PF01202 Shikimate kinase DY252_RS17820 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS17830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS17840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DY252_RS17840 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS17850 PF01966 HD domain DY252_RS17855 PF01507 Phosphoadenosine phosphosulfate reductase family DY252_RS17865 PF02628 Cytochrome oxidase assembly protein DY252_RS17875 PF01523 Putative modulator of DNA gyrase DY252_RS17890 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_RS17890 PF00672 HAMP domain DY252_RS17895 PF01212 Beta-eliminating lyase DY252_RS17900 PF01212 Beta-eliminating lyase DY252_RS17905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_RS17910 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS17915 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_RS17915 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS17920 PF00005 ABC transporter DY252_RS17920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_RS17925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_RS17925 PF00005 ABC transporter DY252_RS17930 PF01810 LysE type translocator DY252_RS17950 PF10415 Fumarase C C-terminus DY252_RS17950 PF00206 Lyase DY252_RS17955 PF08220 DeoR-like helix-turn-helix domain DY252_RS17955 PF00455 DeoR C terminal sensor domain DY252_RS17965 PF00005 ABC transporter DY252_RS17970 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS17975 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS17980 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DY252_RS17980 PF01266 FAD dependent oxidoreductase DY252_RS17985 PF04107 Glutamate-cysteine ligase family 2(GCS2) DY252_RS17990 PF04452 RNA methyltransferase DY252_RS17995 PF01040 UbiA prenyltransferase family DY252_RS18015 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DY252_RS18035 PF01523 Putative modulator of DNA gyrase DY252_RS18040 PF08269 Cache domain DY252_RS18040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS18045 PF00781 Diacylglycerol kinase catalytic domain DY252_RS18055 PF13579 Glycosyl transferase 4-like domain DY252_RS18055 PF00534 Glycosyl transferases group 1 DY252_RS18065 PF00005 ABC transporter DY252_RS18065 PF00664 ABC transporter transmembrane region DY252_RS18075 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DY252_RS18080 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DY252_RS18105 PF02601 Exonuclease VII, large subunit DY252_RS18105 PF13742 OB-fold nucleic acid binding domain DY252_RS18110 PF02844 Phosphoribosylglycinamide synthetase, N domain DY252_RS18110 PF02843 Phosphoribosylglycinamide synthetase, C domain DY252_RS18110 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DY252_RS18115 PF00005 ABC transporter DY252_RS18120 PF01032 FecCD transport family DY252_RS18130 PF04349 Periplasmic glucan biosynthesis protein, MdoG DY252_RS18135 PF06719 AraC-type transcriptional regulator N-terminus DY252_RS18135 PF12833 Helix-turn-helix domain DY252_RS18140 PF00106 short chain dehydrogenase DY252_RS18155 PF14437 MafB19-like deaminase DY252_RS18160 PF07722 Peptidase C26 DY252_RS18195 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DY252_RS18195 PF01048 Phosphorylase superfamily DY252_RS18205 PF04542 Sigma-70 region 2 DY252_RS18205 PF08281 Sigma-70, region 4 DY252_RS18225 PF00210 Ferritin-like domain DY252_RS18230 PF00781 Diacylglycerol kinase catalytic domain DY252_RS18235 PF00448 SRP54-type protein, GTPase domain DY252_RS18235 PF02881 SRP54-type protein, helical bundle domain DY252_RS18240 PF04055 Radical SAM superfamily DY252_RS18240 PF00919 Uncharacterized protein family UPF0004 DY252_RS18245 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS18250 PF00696 Amino acid kinase family DY252_RS18255 PF01926 50S ribosome-binding GTPase DY252_RS18260 PF14849 YidC periplasmic domain DY252_RS18260 PF02096 60Kd inner membrane protein DY252_RS18265 PF01809 Putative membrane protein insertion efficiency factor DY252_RS18270 PF00825 Ribonuclease P DY252_RS18275 PF00468 Ribosomal protein L34 DY252_RS18285 PF00529 HlyD membrane-fusion protein of T1SS DY252_RS18290 PF00664 ABC transporter transmembrane region DY252_RS18290 PF00005 ABC transporter DY252_RS18295 PF00664 ABC transporter transmembrane region DY252_RS18295 PF00005 ABC transporter DY252_RS18295 PF03412 Peptidase C39 family DY252_RS18300 PF01479 S4 domain DY252_RS18310 PF09278 MerR, DNA binding DY252_RS18310 PF00376 MerR family regulatory protein DY252_RS18315 PF03358 NADPH-dependent FMN reductase DY252_RS18325 PF00183 Hsp90 protein DY252_RS18330 PF08269 Cache domain DY252_RS18330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS18335 PF01966 HD domain DY252_RS18365 PF01557 Fumarylacetoacetate (FAA) hydrolase family DY252_RS18375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_RS18375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_RS18390 PF05958 tRNA (Uracil-5-)-methyltransferase DY252_RS18395 PF00563 EAL domain DY252_RS18395 PF03707 Bacterial signalling protein N terminal repeat DY252_RS18395 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS18400 PF03448 MgtE intracellular N domain DY252_RS18400 PF00571 CBS domain DY252_RS18400 PF01769 Divalent cation transporter DY252_RS18405 PF03949 Malic enzyme, NAD binding domain DY252_RS18405 PF00390 Malic enzyme, N-terminal domain DY252_RS18405 PF01515 Phosphate acetyl/butaryl transferase DY252_RS18415 PF03099 Biotin/lipoate A/B protein ligase family DY252_RS18420 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS18450 PF02469 Fasciclin domain DY252_RS18465 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS18465 PF00072 Response regulator receiver domain DY252_RS18470 PF03328 HpcH/HpaI aldolase/citrate lyase family DY252_RS18475 PF02525 Flavodoxin-like fold DY252_RS18480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS18480 PF03466 LysR substrate binding domain DY252_RS18485 PF08240 Alcohol dehydrogenase GroES-like domain DY252_RS18485 PF00107 Zinc-binding dehydrogenase DY252_RS18490 PF01638 HxlR-like helix-turn-helix DY252_RS18495 PF13673 Acetyltransferase (GNAT) domain DY252_RS18500 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DY252_RS18515 PF03412 Peptidase C39 family DY252_RS18515 PF00005 ABC transporter DY252_RS18515 PF00664 ABC transporter transmembrane region DY252_RS18525 PF00171 Aldehyde dehydrogenase family DY252_RS18530 PF00202 Aminotransferase class-III DY252_RS18540 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS18545 PF00155 Aminotransferase class I and II DY252_RS18545 PF00392 Bacterial regulatory proteins, gntR family DY252_RS18550 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DY252_RS18555 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS18560 PF17645 Arylmalonate decarboxylase DY252_RS18565 PF00291 Pyridoxal-phosphate dependent enzyme DY252_RS18570 PF02423 Ornithine cyclodeaminase/mu-crystallin family DY252_RS18575 PF01321 Creatinase/Prolidase N-terminal domain DY252_RS18575 PF00557 Metallopeptidase family M24 DY252_RS18580 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DY252_RS18585 PF01037 Lrp/AsnC ligand binding domain DY252_RS18615 PF01425 Amidase DY252_RS18620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS18630 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS18635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_RS18635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_RS18640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DY252_RS18640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DY252_RS18650 PF13407 Periplasmic binding protein domain DY252_RS18655 PF02653 Branched-chain amino acid transport system / permease component DY252_RS18660 PF00005 ABC transporter DY252_RS18665 PF00356 Bacterial regulatory proteins, lacI family DY252_RS18675 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DY252_RS18680 PF03435 Saccharopine dehydrogenase NADP binding domain DY252_RS18680 PF16653 Saccharopine dehydrogenase C-terminal domain DY252_RS18690 PF00356 Bacterial regulatory proteins, lacI family DY252_RS18700 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS18705 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS18715 PF00005 ABC transporter DY252_RS18715 PF08402 TOBE domain DY252_RS18735 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_RS18735 PF01799 [2Fe-2S] binding domain DY252_RS18740 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DY252_RS18750 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_RS18750 PF12804 MobA-like NTP transferase domain DY252_RS18755 PF00486 Transcriptional regulatory protein, C terminal DY252_RS18755 PF00072 Response regulator receiver domain DY252_RS18760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS18760 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS18760 PF18719 ArlS sensor domain DY252_RS18770 PF00005 ABC transporter DY252_RS18780 PF13458 Periplasmic binding protein DY252_RS18790 PF07729 FCD domain DY252_RS18790 PF00392 Bacterial regulatory proteins, gntR family DY252_RS18800 PF02798 Glutathione S-transferase, N-terminal domain DY252_RS18800 PF14497 Glutathione S-transferase, C-terminal domain DY252_RS18810 PF04209 homogentisate 1,2-dioxygenase DY252_RS18825 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS18835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS18845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DY252_RS18850 PF01037 Lrp/AsnC ligand binding domain DY252_RS18855 PF00005 ABC transporter DY252_RS18860 PF12399 Branched-chain amino acid ATP-binding cassette transporter DY252_RS18860 PF00005 ABC transporter DY252_RS18870 PF02653 Branched-chain amino acid transport system / permease component DY252_RS18880 PF06114 IrrE N-terminal-like domain DY252_RS18880 PF09856 Predicted transcriptional regulator (DUF2083) DY252_RS18880 PF01381 Helix-turn-helix DY252_RS18885 PF00072 Response regulator receiver domain DY252_RS18885 PF00486 Transcriptional regulatory protein, C terminal DY252_RS18895 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS18895 PF00672 HAMP domain DY252_RS18895 PF13426 PAS domain DY252_RS18900 PF00171 Aldehyde dehydrogenase family DY252_RS18915 PF01557 Fumarylacetoacetate (FAA) hydrolase family DY252_RS18925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_RS18925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_RS18930 PF07702 UTRA domain DY252_RS18930 PF00392 Bacterial regulatory proteins, gntR family DY252_RS18935 PF01979 Amidohydrolase family DY252_RS18940 PF01979 Amidohydrolase family DY252_RS18945 PF00221 Aromatic amino acid lyase DY252_RS18955 PF17391 Urocanase N-terminal domain DY252_RS18955 PF17392 Urocanase C-terminal domain DY252_RS18955 PF01175 Urocanase Rossmann-like domain DY252_RS18960 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS18970 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS18980 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS18995 PF00144 Beta-lactamase DY252_RS19000 PF00108 Thiolase, N-terminal domain DY252_RS19000 PF02803 Thiolase, C-terminal domain DY252_RS19005 PF13193 AMP-binding enzyme C-terminal domain DY252_RS19005 PF00501 AMP-binding enzyme DY252_RS19010 PF00106 short chain dehydrogenase DY252_RS19015 PF00378 Enoyl-CoA hydratase/isomerase DY252_RS19020 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS19035 PF08722 TnsA endonuclease N terminal DY252_RS19035 PF08721 TnsA endonuclease C terminal DY252_RS19040 PF00665 Integrase core domain DY252_RS19045 PF11426 Tn7 transposition regulator TnsC DY252_RS19045 PF13401 AAA domain DY252_RS19050 PF13358 DDE superfamily endonuclease DY252_RS19055 PF00005 ABC transporter DY252_RS19065 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS19070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_RS19070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_RS19075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS19075 PF03466 LysR substrate binding domain DY252_RS19080 PF01609 Transposase DDE domain DY252_RS19080 PF05598 Transposase domain (DUF772) DY252_RS19085 PF00072 Response regulator receiver domain DY252_RS19085 PF00158 Sigma-54 interaction domain DY252_RS19105 PF01548 Transposase DY252_RS19105 PF02371 Transposase IS116/IS110/IS902 family DY252_RS19110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS19115 PF12802 MarR family DY252_RS19125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_RS19125 PF12806 Acetyl-CoA dehydrogenase C-terminal like DY252_RS19125 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_RS19125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_RS19130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DY252_RS19130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DY252_RS19135 PF01791 DeoC/LacD family aldolase DY252_RS19140 PF01266 FAD dependent oxidoreductase DY252_RS19140 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DY252_RS19145 PF00248 Aldo/keto reductase family DY252_RS19150 PF04198 Putative sugar-binding domain DY252_RS19155 PF02653 Branched-chain amino acid transport system / permease component DY252_RS19160 PF00005 ABC transporter DY252_RS19170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS19170 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS19175 PF00072 Response regulator receiver domain DY252_RS19175 PF00158 Sigma-54 interaction domain DY252_RS19175 PF02954 Bacterial regulatory protein, Fis family DY252_RS19190 PF02653 Branched-chain amino acid transport system / permease component DY252_RS19200 PF00005 ABC transporter DY252_RS19205 PF00005 ABC transporter DY252_RS19210 PF00465 Iron-containing alcohol dehydrogenase DY252_RS19215 PF00171 Aldehyde dehydrogenase family DY252_RS19220 PF00465 Iron-containing alcohol dehydrogenase DY252_RS19225 PF00248 Aldo/keto reductase family DY252_RS19230 PF02734 DAK2 domain DY252_RS19235 PF02733 Dak1 domain DY252_RS19240 PF02653 Branched-chain amino acid transport system / permease component DY252_RS19245 PF00005 ABC transporter DY252_RS19250 PF13407 Periplasmic binding protein domain DY252_RS19255 PF02653 Branched-chain amino acid transport system / permease component DY252_RS19260 PF00356 Bacterial regulatory proteins, lacI family DY252_RS19270 PF09335 SNARE associated Golgi protein DY252_RS19275 PF02600 Disulfide bond formation protein DsbB DY252_RS19280 PF02311 AraC-like ligand binding domain DY252_RS19280 PF12833 Helix-turn-helix domain DY252_RS19285 PF07715 TonB-dependent Receptor Plug Domain DY252_RS19285 PF00593 TonB dependent receptor DY252_RS19295 PF00830 Ribosomal L28 family DY252_RS19305 PF00563 EAL domain DY252_RS19305 PF03707 Bacterial signalling protein N terminal repeat DY252_RS19305 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS19310 PF00749 tRNA synthetases class I (E and Q), catalytic domain DY252_RS19315 PF11775 Cobalamin biosynthesis protein CobT VWA domain DY252_RS19315 PF06213 Cobalamin biosynthesis protein CobT DY252_RS19320 PF12556 Cobaltochelatase CobS subunit N terminal DY252_RS19320 PF07728 AAA domain (dynein-related subfamily) DY252_RS19320 PF08406 CbbQ/NirQ/NorQ C-terminal DY252_RS19325 PF00226 DnaJ domain DY252_RS19330 PF01722 BolA-like protein DY252_RS19335 PF07995 Glucose / Sorbosone dehydrogenase DY252_RS19355 PF00571 CBS domain DY252_RS19360 PF03471 Transporter associated domain DY252_RS19360 PF00571 CBS domain DY252_RS19360 PF01595 Cyclin M transmembrane N-terminal domain DY252_RS19365 PF01761 3-dehydroquinate synthase DY252_RS19370 PF01202 Shikimate kinase DY252_RS19380 PF00589 Phage integrase family DY252_RS19380 PF02899 Phage integrase, N-terminal SAM-like domain DY252_RS19385 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS19385 PF13426 PAS domain DY252_RS19385 PF00563 EAL domain DY252_RS19400 PF01743 Poly A polymerase head domain DY252_RS19400 PF12627 Probable RNA and SrmB- binding site of polymerase A DY252_RS19400 PF01966 HD domain DY252_RS19410 PF00293 NUDIX domain DY252_RS19420 PF17863 AAA lid domain DY252_RS19420 PF07726 ATPase family associated with various cellular activities (AAA) DY252_RS19440 PF03466 LysR substrate binding domain DY252_RS19440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS19445 PF13409 Glutathione S-transferase, N-terminal domain DY252_RS19450 PF00430 ATP synthase B/B' CF(0) DY252_RS19455 PF00430 ATP synthase B/B' CF(0) DY252_RS19460 PF00137 ATP synthase subunit C DY252_RS19465 PF00119 ATP synthase A chain DY252_RS19470 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter DY252_RS19480 PF02463 RecF/RecN/SMC N terminal domain DY252_RS19485 PF06965 Na+/H+ antiporter 1 DY252_RS19485 PF13462 Thioredoxin DY252_RS19495 PF00730 HhH-GPD superfamily base excision DNA repair protein DY252_RS19495 PF14815 NUDIX domain DY252_RS19505 PF01555 DNA methylase DY252_RS19505 PF18755 Restriction Enzyme Adenine Methylase Associated DY252_RS19510 PF02608 ABC transporter substrate-binding protein PnrA-like DY252_RS19515 PF00005 ABC transporter DY252_RS19520 PF02653 Branched-chain amino acid transport system / permease component DY252_RS19530 PF07969 Amidohydrolase family DY252_RS19535 PF01613 Flavin reductase like domain DY252_RS19545 PF01728 FtsJ-like methyltransferase DY252_RS19545 PF18125 RlmM ferredoxin-like domain DY252_RS19555 PF02910 Fumarate reductase flavoprotein C-term DY252_RS19555 PF00890 FAD binding domain DY252_RS19570 PF03547 Membrane transport protein DY252_RS19575 PF00664 ABC transporter transmembrane region DY252_RS19575 PF00005 ABC transporter DY252_RS19580 PF00171 Aldehyde dehydrogenase family DY252_RS19585 PF01467 Cytidylyltransferase-like DY252_RS19595 PF02590 Predicted SPOUT methyltransferase DY252_RS19600 PF00672 HAMP domain DY252_RS19600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS19600 PF16591 Helical bimodular sensor domain DY252_RS19605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS19605 PF00672 HAMP domain DY252_RS19605 PF12729 Four helix bundle sensory module for signal transduction DY252_RS19610 PF08220 DeoR-like helix-turn-helix domain DY252_RS19610 PF00455 DeoR C terminal sensor domain DY252_RS19615 PF00202 Aminotransferase class-III DY252_RS19630 PF01872 RibD C-terminal domain DY252_RS19635 PF03315 Serine dehydratase beta chain DY252_RS19635 PF03313 Serine dehydratase alpha chain DY252_RS19640 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DY252_RS19640 PF01676 Metalloenzyme superfamily DY252_RS19645 PF01551 Peptidase family M23 DY252_RS19650 PF03572 Peptidase family S41 DY252_RS19650 PF13180 PDZ domain DY252_RS19660 PF00293 NUDIX domain DY252_RS19670 PF13649 Methyltransferase domain DY252_RS19690 PF00162 Phosphoglycerate kinase DY252_RS19695 PF01678 Diaminopimelate epimerase DY252_RS19705 PF00106 short chain dehydrogenase DY252_RS19720 PF00115 Cytochrome C and Quinol oxidase polypeptide I DY252_RS19735 PF00034 Cytochrome c DY252_RS19735 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DY252_RS19735 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DY252_RS19740 PF12801 4Fe-4S binding domain DY252_RS19740 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DY252_RS19740 PF13746 4Fe-4S dicluster domain DY252_RS19755 PF03597 Cytochrome oxidase maturation protein cbb3-type DY252_RS19760 PF00027 Cyclic nucleotide-binding domain DY252_RS19760 PF00325 Bacterial regulatory proteins, crp family DY252_RS19765 PF02548 Ketopantoate hydroxymethyltransferase DY252_RS19770 PF02569 Pantoate-beta-alanine ligase DY252_RS19775 PF02978 Signal peptide binding domain DY252_RS19775 PF02881 SRP54-type protein, helical bundle domain DY252_RS19775 PF00448 SRP54-type protein, GTPase domain DY252_RS19780 PF00886 Ribosomal protein S16 DY252_RS19785 PF01782 RimM N-terminal domain DY252_RS19785 PF05239 PRC-barrel domain DY252_RS19790 PF01746 tRNA (Guanine-1)-methyltransferase DY252_RS19795 PF01245 Ribosomal protein L19 DY252_RS19800 PF00330 Aconitase family (aconitate hydratase) DY252_RS19810 PF00694 Aconitase C-terminal domain DY252_RS19815 PF00180 Isocitrate/isopropylmalate dehydrogenase DY252_RS19820 PF08281 Sigma-70, region 4 DY252_RS19820 PF12680 SnoaL-like domain DY252_RS19820 PF04542 Sigma-70 region 2 DY252_RS19825 PF02627 Carboxymuconolactone decarboxylase family DY252_RS19840 PF02774 Semialdehyde dehydrogenase, dimerisation domain DY252_RS19840 PF01118 Semialdehyde dehydrogenase, NAD binding domain DY252_RS19855 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS19860 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS19865 PF08402 TOBE domain DY252_RS19865 PF00005 ABC transporter DY252_RS19880 PF02080 TrkA-C domain DY252_RS19880 PF03600 Citrate transporter DY252_RS19890 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DY252_RS19890 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DY252_RS19895 PF02594 Uncharacterised ACR, YggU family COG1872 DY252_RS19900 PF02325 YGGT family DY252_RS19905 PF03352 Methyladenine glycosylase DY252_RS19905 PF13302 Acetyltransferase (GNAT) domain DY252_RS19905 PF13673 Acetyltransferase (GNAT) domain DY252_RS19905 PF00958 GMP synthase C terminal domain DY252_RS19905 PF00117 Glutamine amidotransferase class-I DY252_RS19910 PF00356 Bacterial regulatory proteins, lacI family DY252_RS19920 PF02321 Outer membrane efflux protein DY252_RS19925 PF00873 AcrB/AcrD/AcrF family DY252_RS19930 PF13533 Biotin-lipoyl like DY252_RS19935 PF08269 Cache domain DY252_RS19935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS19950 PF00491 Arginase family DY252_RS19955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS19955 PF03466 LysR substrate binding domain DY252_RS19970 PF00009 Elongation factor Tu GTP binding domain DY252_RS19970 PF03144 Elongation factor Tu domain 2 DY252_RS19970 PF16658 Class II release factor RF3, C-terminal domain DY252_RS19990 PF01758 Sodium Bile acid symporter family DY252_RS19995 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DY252_RS19995 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DY252_RS20005 PF02562 PhoH-like protein DY252_RS20010 PF16916 Dimerisation domain of Zinc Transporter DY252_RS20010 PF01545 Cation efflux family DY252_RS20015 PF01578 Cytochrome C assembly protein DY252_RS20015 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DY252_RS20025 PF00072 Response regulator receiver domain DY252_RS20035 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DY252_RS20040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DY252_RS20040 PF02874 ATP synthase alpha/beta family, beta-barrel domain DY252_RS20045 PF00231 ATP synthase DY252_RS20050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DY252_RS20050 PF02874 ATP synthase alpha/beta family, beta-barrel domain DY252_RS20050 PF00306 ATP synthase alpha/beta chain, C terminal domain DY252_RS20055 PF00213 ATP synthase delta (OSCP) subunit DY252_RS20060 PF02798 Glutathione S-transferase, N-terminal domain DY252_RS20060 PF00043 Glutathione S-transferase, C-terminal domain DY252_RS20075 PF00270 DEAD/DEAH box helicase DY252_RS20075 PF17764 3′ DNA-binding domain (3′BD) DY252_RS20075 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DY252_RS20075 PF18074 Primosomal protein N C-terminal domain DY252_RS20080 PF00923 Transaldolase/Fructose-6-phosphate aldolase DY252_RS20090 PF02899 Phage integrase, N-terminal SAM-like domain DY252_RS20090 PF00589 Phage integrase family DY252_RS20105 PF13417 Glutathione S-transferase, N-terminal domain DY252_RS20105 PF00043 Glutathione S-transferase, C-terminal domain DY252_RS20115 PF00120 Glutamine synthetase, catalytic domain DY252_RS20125 PF02445 Quinolinate synthetase A protein DY252_RS20130 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DY252_RS20130 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DY252_RS20135 PF00293 NUDIX domain DY252_RS20145 PF00924 Mechanosensitive ion channel DY252_RS20145 PF12794 Mechanosensitive ion channel inner membrane domain 1 DY252_RS20145 PF12795 Mechanosensitive ion channel porin domain DY252_RS20150 PF01544 CorA-like Mg2+ transporter protein DY252_RS20155 PF03969 AFG1-like ATPase DY252_RS20160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DY252_RS20160 PF00056 lactate/malate dehydrogenase, NAD binding domain DY252_RS20165 PF08442 ATP-grasp domain DY252_RS20165 PF00549 CoA-ligase DY252_RS20170 PF02629 CoA binding domain DY252_RS20170 PF00549 CoA-ligase DY252_RS20175 PF16870 2-oxoglutarate dehydrogenase C-terminal DY252_RS20175 PF00676 Dehydrogenase E1 component DY252_RS20175 PF02779 Transketolase, pyrimidine binding domain DY252_RS20175 PF16078 2-oxoglutarate dehydrogenase N-terminus DY252_RS20180 PF02817 e3 binding domain DY252_RS20180 PF00364 Biotin-requiring enzyme DY252_RS20180 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DY252_RS20185 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS20185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DY252_RS20190 PF02142 MGS-like domain DY252_RS20200 PF00849 RNA pseudouridylate synthase DY252_RS20210 PF00106 short chain dehydrogenase DY252_RS20240 PF01593 Flavin containing amine oxidoreductase DY252_RS20245 PF04545 Sigma-70, region 4 DY252_RS20245 PF04542 Sigma-70 region 2 DY252_RS20250 PF12973 ChrR Cupin-like domain DY252_RS20255 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DY252_RS20260 PF00849 RNA pseudouridylate synthase DY252_RS20280 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS20285 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS20285 PF00072 Response regulator receiver domain DY252_RS20300 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS20320 PF01274 Malate synthase DY252_RS20325 PF00557 Metallopeptidase family M24 DY252_RS20330 PF03707 Bacterial signalling protein N terminal repeat DY252_RS20330 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS20330 PF00563 EAL domain DY252_RS20335 PF00775 Dioxygenase DY252_RS20340 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DY252_RS20340 PF00775 Dioxygenase DY252_RS20345 PF03466 LysR substrate binding domain DY252_RS20345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS20350 PF03458 UPF0126 domain DY252_RS20355 PF07702 UTRA domain DY252_RS20355 PF00392 Bacterial regulatory proteins, gntR family DY252_RS20360 PF06754 Phosphonate metabolism protein PhnG DY252_RS20370 PF05861 Bacterial phosphonate metabolism protein (PhnI) DY252_RS20375 PF06007 Phosphonate metabolism protein PhnJ DY252_RS20380 PF00005 ABC transporter DY252_RS20385 PF00005 ABC transporter DY252_RS20390 PF07969 Amidohydrolase family DY252_RS20395 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DY252_RS20395 PF00591 Glycosyl transferase family, a/b domain DY252_RS20395 PF00625 Guanylate kinase DY252_RS20395 PF02885 Glycosyl transferase family, helical bundle domain DY252_RS20400 PF06299 Protein of unknown function (DUF1045) DY252_RS20410 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS20420 PF00005 ABC transporter DY252_RS20425 PF02615 Malate/L-lactate dehydrogenase DY252_RS20435 PF02028 BCCT, betaine/carnitine/choline family transporter DY252_RS20445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_RS20450 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS20455 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_RS20455 PF00528 Binding-protein-dependent transport system inner membrane component DY252_RS20460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_RS20460 PF00005 ABC transporter DY252_RS20465 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DY252_RS20465 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DY252_RS20470 PF07859 alpha/beta hydrolase fold DY252_RS20475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DY252_RS20475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DY252_RS20480 PF05853 beta-keto acid cleavage enzyme DY252_RS20485 PF12833 Helix-turn-helix domain DY252_RS20485 PF01965 DJ-1/PfpI family DY252_RS20490 PF00056 lactate/malate dehydrogenase, NAD binding domain DY252_RS20490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DY252_RS20495 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DY252_RS20495 PF00355 Rieske [2Fe-2S] domain DY252_RS20500 PF00970 Oxidoreductase FAD-binding domain DY252_RS20500 PF00175 Oxidoreductase NAD-binding domain DY252_RS20500 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_RS20505 PF12833 Helix-turn-helix domain DY252_RS20510 PF01012 Electron transfer flavoprotein domain DY252_RS20515 PF00766 Electron transfer flavoprotein FAD-binding domain DY252_RS20515 PF01012 Electron transfer flavoprotein domain DY252_RS20520 PF00551 Formyl transferase DY252_RS20520 PF01842 ACT domain DY252_RS20525 PF16350 FAD dependent oxidoreductase central domain DY252_RS20525 PF01266 FAD dependent oxidoreductase DY252_RS20525 PF08669 Glycine cleavage T-protein C-terminal barrel domain DY252_RS20525 PF01571 Aminomethyltransferase folate-binding domain DY252_RS20540 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS20540 PF00072 Response regulator receiver domain DY252_RS20540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS20540 PF09308 LuxQ, periplasmic DY252_RS20565 PF12796 Ankyrin repeats (3 copies) DY252_RS20565 PF13606 Ankyrin repeat DY252_RS20575 PF00072 Response regulator receiver domain DY252_RS20575 PF00196 Bacterial regulatory proteins, luxR family DY252_RS20605 PF02661 Fic/DOC family DY252_RS20610 PF01548 Transposase DY252_RS20610 PF02371 Transposase IS116/IS110/IS902 family DY252_RS20625 PF09278 MerR, DNA binding DY252_RS20625 PF00376 MerR family regulatory protein DY252_RS20630 PF00873 AcrB/AcrD/AcrF family DY252_RS20635 PF13533 Biotin-lipoyl like DY252_RS20640 PF00872 Transposase, Mutator family DY252_RS20645 PF00403 Heavy-metal-associated domain DY252_RS20650 PF01022 Bacterial regulatory protein, arsR family DY252_RS20660 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_RS20660 PF00175 Oxidoreductase NAD-binding domain DY252_RS20660 PF00970 Oxidoreductase FAD-binding domain DY252_RS20675 PF00403 Heavy-metal-associated domain DY252_RS20680 PF09278 MerR, DNA binding DY252_RS20680 PF00376 MerR family regulatory protein DY252_RS20685 PF07690 Major Facilitator Superfamily DY252_RS20690 PF02583 Metal-sensitive transcriptional repressor DY252_RS20695 PF08534 Redoxin DY252_RS20695 PF00462 Glutaredoxin DY252_RS20705 PF01022 Bacterial regulatory protein, arsR family DY252_RS20710 PF00872 Transposase, Mutator family DY252_RS20715 PF01545 Cation efflux family DY252_RS20725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS20725 PF03466 LysR substrate binding domain DY252_RS20735 PF03743 Bacterial conjugation TrbI-like protein DY252_RS20750 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DY252_RS20765 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DY252_RS20780 PF00437 Type II/IV secretion system protein DY252_RS20815 PF13533 Biotin-lipoyl like DY252_RS20820 PF00873 AcrB/AcrD/AcrF family DY252_RS20830 PF01527 Transposase DY252_RS20855 PF02534 Type IV secretory system Conjugative DNA transfer DY252_RS20865 PF01464 Transglycosylase SLT domain DY252_RS20890 PF13614 AAA domain DY252_RS20920 PF05284 Protein of unknown function (DUF736) DY252_RS20950 PF00248 Aldo/keto reductase family DY252_RS20990 PF00004 ATPase family associated with various cellular activities (AAA) DY252_RS21010 PF00440 Bacterial regulatory proteins, tetR family DY252_RS21020 PF04002 RadC-like JAB domain DY252_RS21030 PF13362 Toprim domain DY252_RS21030 PF18818 Metallopeptidase superfamily domain DY252_RS21030 PF08401 Domain of unknown function (DUF1738) DY252_RS21035 PF13173 AAA domain DY252_RS21035 PF13635 Domain of unknown function (DUF4143) DY252_RS21045 PF08148 DSHCT (NUC185) domain DY252_RS21045 PF00270 DEAD/DEAH box helicase DY252_RS21045 PF00271 Helicase conserved C-terminal domain DY252_RS21065 PF01850 PIN domain DY252_RS21085 PF00589 Phage integrase family DY252_RS21100 PF01555 DNA methylase DY252_RS21100 PF18273 Type III R-M EcoP15I C-terminal domain DY252_RS21105 PF00176 SNF2 family N-terminal domain DY252_RS21105 PF00271 Helicase conserved C-terminal domain DY252_RS21115 PF02534 Type IV secretory system Conjugative DNA transfer DY252_RS21155 PF05284 Protein of unknown function (DUF736) DY252_RS21210 PF07804 HipA-like C-terminal domain DY252_RS21210 PF13657 HipA N-terminal domain DY252_RS21215 PF01381 Helix-turn-helix DY252_RS21225 PF08401 Domain of unknown function (DUF1738) DY252_RS21225 PF18818 Metallopeptidase superfamily domain DY252_RS21230 PF02534 Type IV secretory system Conjugative DNA transfer DY252_RS21275 PF03009 Glycerophosphoryl diester phosphodiesterase family DY252_RS21280 PF01554 MatE DY252_RS21295 PF01451 Low molecular weight phosphotyrosine protein phosphatase DY252_RS21300 PF03881 Fructosamine kinase DY252_RS21310 PF01227 GTP cyclohydrolase I DY252_RS21315 PF04379 ApaG domain DY252_RS21320 PF01053 Cys/Met metabolism PLP-dependent enzyme DY252_RS21325 PF09335 SNARE associated Golgi protein DY252_RS21330 PF00403 Heavy-metal-associated domain DY252_RS21330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DY252_RS21330 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_RS21335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS21335 PF00989 PAS fold DY252_RS21335 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS21340 PF03352 Methyladenine glycosylase DY252_RS21350 PF00440 Bacterial regulatory proteins, tetR family DY252_RS21350 PF17932 Tetracyclin repressor-like, C-terminal domain DY252_RS21355 PF02386 Cation transport protein DY252_RS21360 PF03707 Bacterial signalling protein N terminal repeat DY252_RS21360 PF00563 EAL domain DY252_RS21360 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS21365 PF02774 Semialdehyde dehydrogenase, dimerisation domain DY252_RS21365 PF01118 Semialdehyde dehydrogenase, NAD binding domain DY252_RS21375 PF02386 Cation transport protein DY252_RS21380 PF00565 Staphylococcal nuclease homologue DY252_RS21385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DY252_RS21390 PF08281 Sigma-70, region 4 DY252_RS21390 PF04542 Sigma-70 region 2 DY252_RS21400 PF07995 Glucose / Sorbosone dehydrogenase DY252_RS21405 PF00156 Phosphoribosyl transferase domain DY252_RS21415 PF02203 Tar ligand binding domain homologue DY252_RS21415 PF00672 HAMP domain DY252_RS21415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS21425 PF03109 ABC1 family DY252_RS21430 PF01209 ubiE/COQ5 methyltransferase family DY252_RS21435 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DY252_RS21440 PF00520 Ion transport protein DY252_RS21440 PF00027 Cyclic nucleotide-binding domain DY252_RS21445 PF00425 chorismate binding enzyme DY252_RS21445 PF04715 Anthranilate synthase component I, N terminal region DY252_RS21445 PF00117 Glutamine amidotransferase class-I DY252_RS21455 PF05532 CsbD-like DY252_RS21470 PF01293 Phosphoenolpyruvate carboxykinase DY252_RS21480 PF00563 EAL domain DY252_RS21480 PF00990 Diguanylate cyclase, GGDEF domain DY252_RS21480 PF13426 PAS domain DY252_RS21490 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DY252_RS21490 PF14602 Hexapeptide repeat of succinyl-transferase DY252_RS21490 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_RS21495 PF01546 Peptidase family M20/M25/M40 DY252_RS21495 PF07687 Peptidase dimerisation domain DY252_RS21510 PF13417 Glutathione S-transferase, N-terminal domain DY252_RS21515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS21515 PF03466 LysR substrate binding domain DY252_RS21530 PF09297 NADH pyrophosphatase zinc ribbon domain DY252_RS21530 PF00293 NUDIX domain DY252_RS21530 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DY252_RS21540 PF12169 DNA polymerase III subunits gamma and tau domain III DY252_RS21540 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DY252_RS21540 PF12170 DNA polymerase III tau subunit V interacting with alpha DY252_RS21545 PF02575 YbaB/EbfC DNA-binding family DY252_RS21550 PF13662 Toprim domain DY252_RS21550 PF02132 RecR protein DY252_RS21555 PF01220 Dehydroquinase class II DY252_RS21560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DY252_RS21560 PF01261 Xylose isomerase-like TIM barrel DY252_RS21565 PF07729 FCD domain DY252_RS21565 PF00392 Bacterial regulatory proteins, gntR family DY252_RS21570 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DY252_RS21570 PF08501 Shikimate dehydrogenase substrate binding domain DY252_RS21575 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DY252_RS21575 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_RS21585 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_RS21590 PF00027 Cyclic nucleotide-binding domain DY252_RS21590 PF13545 Crp-like helix-turn-helix domain DY252_RS21595 PF00072 Response regulator receiver domain DY252_RS21595 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_RS21620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_RS21620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_RS21625 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS21625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS21630 PF01966 HD domain DY252_RS21650 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DY252_RS21650 PF05221 S-adenosyl-L-homocysteine hydrolase DY252_RS21655 PF02896 PEP-utilising enzyme, TIM barrel domain DY252_RS21655 PF00391 PEP-utilising enzyme, mobile domain DY252_RS21655 PF05524 PEP-utilising enzyme, N-terminal DY252_RS21660 PF00381 PTS HPr component phosphorylation site DY252_RS21665 PF03830 PTS system sorbose subfamily IIB component DY252_RS21665 PF03610 PTS system fructose IIA component DY252_RS21670 PF03668 P-loop ATPase protein family DY252_RS21680 PF13756 Stimulus-sensing domain DY252_RS21680 PF13755 Sensor N-terminal transmembrane domain DY252_RS21680 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS21680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS21680 PF00672 HAMP domain DY252_RS21685 PF00486 Transcriptional regulatory protein, C terminal DY252_RS21685 PF00072 Response regulator receiver domain DY252_RS21690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_RS21690 PF02743 Cache domain DY252_RS21690 PF00512 His Kinase A (phospho-acceptor) domain DY252_RS21695 PF02954 Bacterial regulatory protein, Fis family DY252_RS21695 PF00072 Response regulator receiver domain DY252_RS21695 PF00158 Sigma-54 interaction domain DY252_RS21700 PF16868 NMT1-like family DY252_RS21730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS21730 PF03466 LysR substrate binding domain DY252_RS21740 PF00551 Formyl transferase DY252_RS21740 PF02911 Formyl transferase, C-terminal domain DY252_RS21750 PF01327 Polypeptide deformylase DY252_RS21755 PF02646 RmuC family DY252_RS21760 PF13193 AMP-binding enzyme C-terminal domain DY252_RS21760 PF00501 AMP-binding enzyme DY252_RS21760 PF16177 Acetyl-coenzyme A synthetase N-terminus DY252_RS21765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS21765 PF03466 LysR substrate binding domain DY252_RS21770 PF03401 Tripartite tricarboxylate transporter family receptor DY252_RS21775 PF01970 Tripartite tricarboxylate transporter TctA family DY252_RS21780 PF00180 Isocitrate/isopropylmalate dehydrogenase DY252_RS21785 PF05161 MOFRL family DY252_RS21785 PF13660 Domain of unknown function (DUF4147) DY252_RS21790 PF00180 Isocitrate/isopropylmalate dehydrogenase DY252_RS21795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS21795 PF03466 LysR substrate binding domain DY252_RS21810 PF01047 MarR family DY252_RS21820 PF01740 STAS domain DY252_RS21820 PF00916 Sulfate permease family DY252_RS21825 PF00582 Universal stress protein family DY252_RS21845 PF01430 Hsp33 protein DY252_RS21850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DY252_RS21850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DY252_RS21855 PF00202 Aminotransferase class-III DY252_RS21860 PF01061 ABC-2 type transporter DY252_RS21865 PF02631 RecX family DY252_RS21870 PF03960 ArsC family DY252_RS21880 PF03788 LrgA family DY252_RS21885 PF04172 LrgB-like family DY252_RS21900 PF08269 Cache domain DY252_RS21900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_RS21905 PF01416 tRNA pseudouridine synthase DY252_RS21910 PF00764 Arginosuccinate synthase DY252_RS21920 PF01810 LysE type translocator DY252_RS21925 PF03466 LysR substrate binding domain DY252_RS21925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_RS21930 PF03401 Tripartite tricarboxylate transporter family receptor DY252_RS21940 PF01970 Tripartite tricarboxylate transporter TctA family DY252_RS21945 PF07687 Peptidase dimerisation domain DY252_RS21945 PF01546 Peptidase family M20/M25/M40 DY252_RS21960 PF00912 Transglycosylase DY252_RS21960 PF00905 Penicillin binding protein transpeptidase domain DY252_RS21965 PF00912 Transglycosylase