LT090_RS00005	SM00382	ATPases associated with a variety of cellular activities
LT090_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
LT090_RS00010	SM00480	DNA polymerase III beta subunit
LT090_RS00020	SM00387	Histidine kinase-like ATPases
LT090_RS00020	SM00433	TopoisomeraseII
LT090_RS00075	SM00257	Lysin motif
LT090_RS00100	SM01001	AIR carboxylase
LT090_RS00195	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
LT090_RS00205	SM00116	Domain in cystathionine beta-synthase and other proteins.
LT090_RS00210	SM00938	Nitrogen regulatory protein P-II
LT090_RS00250	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
LT090_RS00260	SM00870	LT090_RS00260
LT090_RS00280	SM00382	ATPases associated with a variety of cellular activities
LT090_RS00310	SM00267	diguanylate cyclase
LT090_RS00315	SM00052	Putative diguanylate phosphodiesterase
LT090_RS00315	SM00267	diguanylate cyclase
LT090_RS00330	SM00382	ATPases associated with a variety of cellular activities
LT090_RS00335	SM00382	ATPases associated with a variety of cellular activities
LT090_RS00335	SM00962	SRP54-type protein, GTPase domain
LT090_RS00335	SM00963	SRP54-type protein, helical bundle domain
LT090_RS00420	SM00363	S4 RNA-binding domain
LT090_RS00445	SM00316	Ribosomal protein S1-like RNA-binding domain
LT090_RS00445	SM00732	Likely ribonuclease with RNase H fold.
LT090_RS00455	SM00448	cheY-homologous receiver domain
LT090_RS00455	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS00460	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LT090_RS00460	SM00387	Histidine kinase-like ATPases
LT090_RS00460	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS00480	SM00363	S4 RNA-binding domain
LT090_RS00495	SM00382	ATPases associated with a variety of cellular activities
LT090_RS00560	SM00479	LT090_RS00560
LT090_RS00570	SM00357	Cold shock protein domain
LT090_RS00570	SM00382	ATPases associated with a variety of cellular activities
LT090_RS00570	SM00959	Rho termination factor, N-terminal domain
LT090_RS00580	SM00487	DEAD-like helicases superfamily
LT090_RS00580	SM00490	helicase superfamily c-terminal domain
LT090_RS00600	SM01004	Delta-aminolevulinic acid dehydratase
LT090_RS00650	SM00487	DEAD-like helicases superfamily
LT090_RS00650	SM00490	helicase superfamily c-terminal domain
LT090_RS00665	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
LT090_RS00665	SM00954	Region found in RelA / SpoT proteins
LT090_RS00670	SM01409	LT090_RS00670
LT090_RS00675	SM00072	Guanylate kinase homologues.
LT090_RS00765	SM00318	Staphylococcal nuclease homologues
LT090_RS00775	SM00686	Domain present in fly proteins (CG14681, CG12492, CG6217), worm H06A10.1 and Arabidopsis thaliana MBG8.9.
LT090_RS00830	SM00387	Histidine kinase-like ATPases
LT090_RS00830	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS00830	SM00448	cheY-homologous receiver domain
LT090_RS00860	SM00631	LT090_RS00860
LT090_RS00955	SM00842	Cell division protein FtsA
LT090_RS00975	SM00965	Secretin and TonB N terminus short domain
LT090_RS01055	SM00798	AICARFT/IMPCHase bienzyme
LT090_RS01055	SM00851	MGS-like domain
LT090_RS01065	SM01209	LT090_RS01065
LT090_RS01065	SM01210	LT090_RS01065
LT090_RS01070	SM00360	RNA recognition motif
LT090_RS01100	SM00155	Phospholipase D. Active site motifs.
LT090_RS01105	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
LT090_RS01125	SM00382	ATPases associated with a variety of cellular activities
LT090_RS01190	SM00382	ATPases associated with a variety of cellular activities
LT090_RS01215	SM00487	DEAD-like helicases superfamily
LT090_RS01215	SM00490	helicase superfamily c-terminal domain
LT090_RS01215	SM00847	Helicase associated domain (HA2)  Add an annotation
LT090_RS01230	SM00899	LT090_RS01230
LT090_RS01240	SM00900	LT090_RS01240
LT090_RS01270	SM00838	Elongation factor G C-terminus
LT090_RS01270	SM00889	Elongation factor G, domain IV
LT090_RS01290	SM01150	LT090_RS01290
LT090_RS01345	SM00878	Biotin carboxylase C-terminal domain
LT090_RS01375	SM00883	Chaperonin 10 Kd subunit
LT090_RS01485	SM00841	Elongation factor P, C-terminal
LT090_RS01485	SM01185	LT090_RS01485
LT090_RS01500	SM00382	ATPases associated with a variety of cellular activities
LT090_RS01500	SM00448	cheY-homologous receiver domain
LT090_RS01505	SM00387	Histidine kinase-like ATPases
LT090_RS01505	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS01515	SM01230	LT090_RS01515
LT090_RS01520	SM00671	Sel1-like repeats.
LT090_RS01540	SM00344	helix_turn_helix ASNC type
LT090_RS01615	SM00244	prohibitin homologues
LT090_RS01620	SM00244	prohibitin homologues
LT090_RS01640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LT090_RS01640	SM00866	LT090_RS01640
LT090_RS01670	SM01217	LT090_RS01670
LT090_RS01740	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
LT090_RS01750	SM00886	Stress responsive A/B Barrel Domain
LT090_RS01755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LT090_RS01755	SM00895	LT090_RS01755
LT090_RS01765	SM01038	Beta galactosidase small chain
LT090_RS01775	SM00671	Sel1-like repeats.
LT090_RS01825	SM00710	Parallel beta-helix repeats
LT090_RS01845	SM01038	Beta galactosidase small chain
LT090_RS01850	SM00710	Parallel beta-helix repeats
LT090_RS01880	SM00812	Alpha-L-fucosidase
LT090_RS01970	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
LT090_RS01970	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
LT090_RS01980	SM00649	Ribosomal protein L11/L12
LT090_RS02005	SM00663	RNA polymerase I subunit A N-terminus
LT090_RS02020	SM00838	Elongation factor G C-terminus
LT090_RS02020	SM00889	Elongation factor G, domain IV
LT090_RS02085	SM01403	LT090_RS02085
LT090_RS02105	SM01382	LT090_RS02105
LT090_RS02105	SM01383	LT090_RS02105
LT090_RS02120	SM00322	K homology RNA-binding domain
LT090_RS02140	SM00052	Putative diguanylate phosphodiesterase
LT090_RS02140	SM00267	diguanylate cyclase
LT090_RS02145	SM01374	LT090_RS02145
LT090_RS02150	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
LT090_RS02215	SM00363	S4 RNA-binding domain
LT090_RS02215	SM01390	LT090_RS02215
LT090_RS02220	SM00662	RNA polymerases D
LT090_RS02295	SM00316	Ribosomal protein S1-like RNA-binding domain
LT090_RS02295	SM00357	Cold shock protein domain
LT090_RS02295	SM00955	LT090_RS02295
LT090_RS02300	SM00967	RNA 2'-O ribose methyltransferase substrate binding
LT090_RS02350	SM00965	Secretin and TonB N terminus short domain
LT090_RS02360	SM00028	Tetratricopeptide repeats
LT090_RS02365	SM00382	ATPases associated with a variety of cellular activities
LT090_RS02445	SM00316	Ribosomal protein S1-like RNA-binding domain
LT090_RS02475	SM00116	Domain in cystathionine beta-synthase and other proteins.
LT090_RS02475	SM00924	MgtE intracellular N domain
LT090_RS02505	SM00382	ATPases associated with a variety of cellular activities
LT090_RS02525	SM00116	Domain in cystathionine beta-synthase and other proteins.
LT090_RS02540	SM00382	ATPases associated with a variety of cellular activities
LT090_RS02575	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
LT090_RS02590	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
LT090_RS02680	SM00919	Malic enzyme, NAD binding domain
LT090_RS02680	SM01274	LT090_RS02680
LT090_RS02685	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
LT090_RS02685	SM00091	PAS domain
LT090_RS02685	SM00387	Histidine kinase-like ATPases
LT090_RS02685	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS02685	SM00448	cheY-homologous receiver domain
LT090_RS02750	SM01209	LT090_RS02750
LT090_RS02760	SM00842	Cell division protein FtsA
LT090_RS02765	SM00864	Tubulin/FtsZ family, GTPase domain
LT090_RS02765	SM00865	Tubulin/FtsZ family, C-terminal domain
LT090_RS02790	SM00957	SecA DEAD-like domain
LT090_RS02790	SM00958	SecA preprotein cross-linking domain
LT090_RS02805	SM00028	Tetratricopeptide repeats
LT090_RS02855	SM00644	LT090_RS02855
LT090_RS02865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LT090_RS02865	SM00895	LT090_RS02865
LT090_RS02955	SM00938	Nitrogen regulatory protein P-II
LT090_RS02990	SM00344	helix_turn_helix ASNC type
LT090_RS03000	SM00257	Lysin motif
LT090_RS03005	SM01007	Class II Aldolase and Adducin N-terminal domain
LT090_RS03010	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
LT090_RS03075	SM00465	GIY-YIG type nucleases (URI domain)
LT090_RS03135	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
LT090_RS03135	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
LT090_RS03135	SM00493	LT090_RS03135
LT090_RS03145	SM00267	diguanylate cyclase
LT090_RS03280	SM00400	zinc finger
LT090_RS03280	SM00493	LT090_RS03280
LT090_RS03280	SM00766	DNA primase DnaG DnaB-binding
LT090_RS03310	SM01207	LT090_RS03310
LT090_RS03315	SM00905	Dihydroneopterin aldolase
LT090_RS03335	SM00382	ATPases associated with a variety of cellular activities
LT090_RS03345	SM00984	UDP binding domain
LT090_RS03365	SM01329	LT090_RS03365
LT090_RS03370	SM00917	LeuA allosteric (dimerisation) domain
LT090_RS03390	SM00287	Bacterial SH3 domain homologues
LT090_RS03395	SM01118	LT090_RS03395
LT090_RS03475	SM00650	Ribosomal RNA adenine dimethylases
LT090_RS03505	SM00271	DnaJ molecular chaperone homology domain
LT090_RS03515	SM00487	DEAD-like helicases superfamily
LT090_RS03515	SM00490	helicase superfamily c-terminal domain
LT090_RS03520	SM00670	Large family of predicted nucleotide-binding domains
LT090_RS03530	SM00479	LT090_RS03530
LT090_RS03550	SM00387	Histidine kinase-like ATPases
LT090_RS03550	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS03555	SM00448	cheY-homologous receiver domain
LT090_RS03555	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS03625	SM00986	Uracil DNA glycosylase superfamily
LT090_RS03625	SM00987	UreE urease accessory protein, C-terminal domain 
LT090_RS03680	SM00450	Rhodanese Homology Domain
LT090_RS03680	SM00849	Metallo-beta-lactamase superfamily
LT090_RS03690	SM00919	Malic enzyme, NAD binding domain
LT090_RS03690	SM01274	LT090_RS03690
LT090_RS03710	SM00562	LT090_RS03710
LT090_RS03720	SM00028	Tetratricopeptide repeats
LT090_RS03720	SM00257	Lysin motif
LT090_RS03725	SM00530	Helix-turn-helix XRE-family like proteins 
LT090_RS03745	SM00564	beta-propeller repeat
LT090_RS03750	SM00382	ATPases associated with a variety of cellular activities
LT090_RS03765	SM00116	Domain in cystathionine beta-synthase and other proteins.
LT090_RS03765	SM01240	LT090_RS03765
LT090_RS03815	SM00852	Probable molybdopterin binding domain
LT090_RS03875	SM00448	cheY-homologous receiver domain
LT090_RS03875	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS03880	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS03905	SM00530	Helix-turn-helix XRE-family like proteins 
LT090_RS03955	SM00257	Lysin motif
LT090_RS03965	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
LT090_RS03965	SM00534	ATPase domain of DNA mismatch repair MUTS family
LT090_RS03970	SM00382	ATPases associated with a variety of cellular activities
LT090_RS03980	SM01018	B12 binding domain
LT090_RS03985	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
LT090_RS03985	SM00245	tail specific protease
LT090_RS03995	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
LT090_RS04030	SM00671	Sel1-like repeats.
LT090_RS04055	SM00487	DEAD-like helicases superfamily
LT090_RS04055	SM00490	helicase superfamily c-terminal domain
LT090_RS04125	SM00900	LT090_RS04125
LT090_RS04175	SM00052	Putative diguanylate phosphodiesterase
LT090_RS04175	SM00267	diguanylate cyclase
LT090_RS04175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LT090_RS04210	SM00028	Tetratricopeptide repeats
LT090_RS04230	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
LT090_RS04230	SM00382	ATPases associated with a variety of cellular activities
LT090_RS04265	SM01091	Transporter associated domain
LT090_RS04280	SM00382	ATPases associated with a variety of cellular activities
LT090_RS04280	SM00962	SRP54-type protein, GTPase domain
LT090_RS04280	SM00963	SRP54-type protein, helical bundle domain
LT090_RS04375	SM00830	Chorismate mutase type II
LT090_RS04430	SM00830	Chorismate mutase type II
LT090_RS04465	SM00091	PAS domain
LT090_RS04465	SM00382	ATPases associated with a variety of cellular activities
LT090_RS04525	SM00358	Double-stranded RNA binding motif
LT090_RS04525	SM00535	Ribonuclease III family
LT090_RS04550	SM00073	Histidine Phosphotransfer domain
LT090_RS04550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LT090_RS04550	SM00387	Histidine kinase-like ATPases
LT090_RS04550	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS04550	SM00448	cheY-homologous receiver domain
LT090_RS04560	SM00954	Region found in RelA / SpoT proteins
LT090_RS04585	SM01192	LT090_RS04585
LT090_RS04585	SM01193	LT090_RS04585
LT090_RS04590	SM00563	Phosphate acyltransferases
LT090_RS04595	SM00530	Helix-turn-helix XRE-family like proteins 
LT090_RS04625	SM00342	helix_turn_helix, arabinose operon control protein
LT090_RS04635	SM01211	LT090_RS04635
LT090_RS04640	SM00062	Bacterial periplasmic substrate-binding proteins
LT090_RS04655	SM00729	Elongator protein 3, MiaB family, Radical SAM
LT090_RS04690	SM00382	ATPases associated with a variety of cellular activities
LT090_RS04715	SM00732	Likely ribonuclease with RNase H fold.
LT090_RS04720	SM00267	diguanylate cyclase
LT090_RS04725	SM00267	diguanylate cyclase
LT090_RS04730	SM00267	diguanylate cyclase
LT090_RS04735	SM00267	diguanylate cyclase
LT090_RS04785	SM00382	ATPases associated with a variety of cellular activities
LT090_RS04785	SM00994	ClpX C4-type zinc finger
LT090_RS04785	SM01086	C-terminal, D2-small domain, of ClpB protein
LT090_RS04790	SM00382	ATPases associated with a variety of cellular activities
LT090_RS04790	SM00464	Found in ATP-dependent protease La (LON)
LT090_RS04795	SM00411	bacterial (prokaryotic) histone like domain
LT090_RS04805	SM00382	ATPases associated with a variety of cellular activities
LT090_RS04810	SM00382	ATPases associated with a variety of cellular activities
LT090_RS04830	SM00382	ATPases associated with a variety of cellular activities
LT090_RS04870	SM00382	ATPases associated with a variety of cellular activities
LT090_RS04885	SM00563	Phosphate acyltransferases
LT090_RS04930	SM00028	Tetratricopeptide repeats
LT090_RS04940	SM00947	Carbonic anhydrase
LT090_RS04980	SM00481	DNA polymerase alpha chain like domain
LT090_RS05000	SM00363	S4 RNA-binding domain
LT090_RS05040	SM00342	helix_turn_helix, arabinose operon control protein
LT090_RS05040	SM00478	endonuclease III
LT090_RS05040	SM01009	AlkA N-terminal domain
LT090_RS05060	SM00342	helix_turn_helix, arabinose operon control protein
LT090_RS05075	SM00710	Parallel beta-helix repeats
LT090_RS05140	SM00116	Domain in cystathionine beta-synthase and other proteins.
LT090_RS05140	SM01091	Transporter associated domain
LT090_RS05155	SM00729	Elongator protein 3, MiaB family, Radical SAM
LT090_RS05235	SM00354	helix_turn _helix lactose operon repressor
LT090_RS05265	SM01081	Putative carbohydrate binding domain
LT090_RS05325	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
LT090_RS05325	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
LT090_RS05365	SM00487	DEAD-like helicases superfamily
LT090_RS05365	SM00490	helicase superfamily c-terminal domain
LT090_RS05375	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS05395	SM00878	Biotin carboxylase C-terminal domain
LT090_RS05415	SM00422	helix_turn_helix, mercury resistance
LT090_RS05445	SM00822	LT090_RS05445
LT090_RS05475	SM00346	helix_turn_helix isocitrate lyase regulation
LT090_RS05485	SM00812	Alpha-L-fucosidase
LT090_RS05505	SM00812	Alpha-L-fucosidase
LT090_RS05530	SM01359	LT090_RS05530
LT090_RS05530	SM01360	LT090_RS05530
LT090_RS05555	SM00829	Enoylreductase
LT090_RS05560	SM00422	helix_turn_helix, mercury resistance
LT090_RS05565	SM00327	von Willebrand factor (vWF) type A domain
LT090_RS05565	SM00609	Vault protein Inter-alpha-Trypsin domain
LT090_RS05610	SM00487	DEAD-like helicases superfamily
LT090_RS05615	SM00487	DEAD-like helicases superfamily
LT090_RS05615	SM00490	helicase superfamily c-terminal domain
LT090_RS05635	SM00487	DEAD-like helicases superfamily
LT090_RS05635	SM00490	helicase superfamily c-terminal domain
LT090_RS05755	SM00357	Cold shock protein domain
LT090_RS05860	SM00855	Phosphoglycerate mutase family
LT090_RS05885	SM00382	ATPases associated with a variety of cellular activities
LT090_RS05890	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
LT090_RS05915	SM00450	Rhodanese Homology Domain
LT090_RS05930	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LT090_RS05930	SM00387	Histidine kinase-like ATPases
LT090_RS05930	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS05930	SM00448	cheY-homologous receiver domain
LT090_RS05940	SM01322	LT090_RS05940
LT090_RS05950	SM00478	endonuclease III
LT090_RS05950	SM00525	LT090_RS05950
LT090_RS05960	SM00900	LT090_RS05960
LT090_RS05985	SM00052	Putative diguanylate phosphodiesterase
LT090_RS05985	SM00267	diguanylate cyclase
LT090_RS06005	SM00062	Bacterial periplasmic substrate-binding proteins
LT090_RS06010	SM00220	Serine/Threonine protein kinases, catalytic domain
LT090_RS06025	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
LT090_RS06060	SM00278	Helix-hairpin-helix DNA-binding motif class 1
LT090_RS06065	SM00382	ATPases associated with a variety of cellular activities
LT090_RS06175	SM00382	ATPases associated with a variety of cellular activities
LT090_RS06245	SM00357	Cold shock protein domain
LT090_RS06270	SM01400	LT090_RS06270
LT090_RS06290	SM00937	LT090_RS06290
LT090_RS06325	SM00634	Bacterial Ig-like domain (group 1)
LT090_RS06330	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
LT090_RS06330	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
LT090_RS06330	SM00493	LT090_RS06330
LT090_RS06390	SM00849	Metallo-beta-lactamase superfamily
LT090_RS06450	SM00861	Transketolase, pyrimidine binding domain
LT090_RS06575	SM00382	ATPases associated with a variety of cellular activities
LT090_RS06610	SM00450	Rhodanese Homology Domain
LT090_RS06645	SM00858	LT090_RS06645
LT090_RS06685	SM00710	Parallel beta-helix repeats
LT090_RS06695	SM00636	LT090_RS06695
LT090_RS06715	SM00060	Fibronectin type 3 domain
LT090_RS06725	SM00812	Alpha-L-fucosidase
LT090_RS06730	SM00710	Parallel beta-helix repeats
LT090_RS06735	SM00812	Alpha-L-fucosidase
LT090_RS06765	SM00812	Alpha-L-fucosidase
LT090_RS06770	SM00112	Cadherin repeats.
LT090_RS06820	SM00327	von Willebrand factor (vWF) type A domain
LT090_RS06825	SM00327	von Willebrand factor (vWF) type A domain
LT090_RS06835	SM00327	von Willebrand factor (vWF) type A domain
LT090_RS06860	SM00812	Alpha-L-fucosidase
LT090_RS06880	SM00895	LT090_RS06880
LT090_RS06900	SM00357	Cold shock protein domain
LT090_RS06935	SM00434	DNA Topoisomerase IV
LT090_RS06955	SM00316	Ribosomal protein S1-like RNA-binding domain
LT090_RS06960	SM00411	bacterial (prokaryotic) histone like domain
LT090_RS06970	SM00028	Tetratricopeptide repeats
LT090_RS06975	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
LT090_RS06980	SM00841	Elongation factor P, C-terminal
LT090_RS06980	SM01185	LT090_RS06980
LT090_RS06985	SM00278	Helix-hairpin-helix DNA-binding motif class 1
LT090_RS06990	SM00316	Ribosomal protein S1-like RNA-binding domain
LT090_RS06995	SM00363	S4 RNA-binding domain
LT090_RS07005	SM00422	helix_turn_helix, mercury resistance
LT090_RS07035	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
LT090_RS07040	SM00822	LT090_RS07040
LT090_RS07050	SM00825	Beta-ketoacyl synthase
LT090_RS07090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LT090_RS07090	SM00895	LT090_RS07090
LT090_RS07150	SM00945	ProQ/FINO family
LT090_RS07155	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
LT090_RS07155	SM00245	tail specific protease
LT090_RS07205	SM00342	helix_turn_helix, arabinose operon control protein
LT090_RS07275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LT090_RS07295	SM00479	LT090_RS07295
LT090_RS07300	SM01263	LT090_RS07300
LT090_RS07325	SM00771	ZipA, C-terminal domain (FtsZ-binding)
LT090_RS07330	SM00278	Helix-hairpin-helix DNA-binding motif class 1
LT090_RS07330	SM00292	breast cancer carboxy-terminal domain
LT090_RS07330	SM00532	Ligase N family
LT090_RS07350	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
LT090_RS07395	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
LT090_RS07400	SM00851	MGS-like domain
LT090_RS07400	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
LT090_RS07420	SM01103	LT090_RS07420
LT090_RS07430	SM00382	ATPases associated with a variety of cellular activities
LT090_RS07475	SM00387	Histidine kinase-like ATPases
LT090_RS07475	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS07480	SM00448	cheY-homologous receiver domain
LT090_RS07480	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS07520	SM00316	Ribosomal protein S1-like RNA-binding domain
LT090_RS07540	SM01387	LT090_RS07540
LT090_RS07560	SM00316	Ribosomal protein S1-like RNA-binding domain
LT090_RS07560	SM00322	K homology RNA-binding domain
LT090_RS07565	SM00028	Tetratricopeptide repeats
LT090_RS07610	SM00487	DEAD-like helicases superfamily
LT090_RS07610	SM00490	helicase superfamily c-terminal domain
LT090_RS07615	SM00487	DEAD-like helicases superfamily
LT090_RS07615	SM00490	helicase superfamily c-terminal domain
LT090_RS07685	SM00448	cheY-homologous receiver domain
LT090_RS07685	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS07690	SM00387	Histidine kinase-like ATPases
LT090_RS07690	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS07715	SM00421	helix_turn_helix, Lux Regulon
LT090_RS07770	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
LT090_RS07800	SM00257	Lysin motif
LT090_RS07805	SM00849	Metallo-beta-lactamase superfamily
LT090_RS07890	SM00829	Enoylreductase
LT090_RS07920	SM00387	Histidine kinase-like ATPases
LT090_RS07920	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS07920	SM00448	cheY-homologous receiver domain
LT090_RS07925	SM00052	Putative diguanylate phosphodiesterase
LT090_RS07925	SM00267	diguanylate cyclase
LT090_RS07925	SM00448	cheY-homologous receiver domain
LT090_RS07930	SM00267	diguanylate cyclase
LT090_RS07930	SM00382	ATPases associated with a variety of cellular activities
LT090_RS07960	SM00028	Tetratricopeptide repeats
LT090_RS07960	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS07980	SM00116	Domain in cystathionine beta-synthase and other proteins.
LT090_RS07985	SM00382	ATPases associated with a variety of cellular activities
LT090_RS07985	SM00487	DEAD-like helicases superfamily
LT090_RS07985	SM00490	helicase superfamily c-terminal domain
LT090_RS07985	SM00847	Helicase associated domain (HA2)  Add an annotation
LT090_RS07995	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
LT090_RS08005	SM00829	Enoylreductase
LT090_RS08050	SM00342	helix_turn_helix, arabinose operon control protein
LT090_RS08070	SM00981	LT090_RS08070
LT090_RS08080	SM00382	ATPases associated with a variety of cellular activities
LT090_RS08110	SM00421	helix_turn_helix, Lux Regulon
LT090_RS08110	SM00448	cheY-homologous receiver domain
LT090_RS08115	SM00278	Helix-hairpin-helix DNA-binding motif class 1
LT090_RS08115	SM00465	GIY-YIG type nucleases (URI domain)
LT090_RS08190	SM00448	cheY-homologous receiver domain
LT090_RS08190	SM00850	LytTr DNA-binding domain
LT090_RS08240	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
LT090_RS08245	SM01350	LT090_RS08245
LT090_RS08250	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
LT090_RS08260	SM00631	LT090_RS08260
LT090_RS08330	SM00729	Elongator protein 3, MiaB family, Radical SAM
LT090_RS08330	SM00876	Biotin and Thiamin Synthesis associated domain
LT090_RS08440	SM00028	Tetratricopeptide repeats
LT090_RS08450	SM01005	Alanine racemase, C-terminal domain
LT090_RS08465	SM00797	Allophanate hydrolase subunit 2
LT090_RS08470	SM00796	Allophanate hydrolase subunit 1
LT090_RS08530	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
LT090_RS08555	SM00382	ATPases associated with a variety of cellular activities
LT090_RS08565	SM00382	ATPases associated with a variety of cellular activities
LT090_RS08565	SM00843	LT090_RS08565
LT090_RS08570	SM00344	helix_turn_helix ASNC type
LT090_RS08575	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
LT090_RS08575	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
LT090_RS08595	SM00316	Ribosomal protein S1-like RNA-binding domain
LT090_RS08605	SM00382	ATPases associated with a variety of cellular activities
LT090_RS08605	SM01086	C-terminal, D2-small domain, of ClpB protein
LT090_RS08615	SM00357	Cold shock protein domain
LT090_RS08660	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
LT090_RS08675	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
LT090_RS08705	SM00226	Low molecular weight phosphatase family
LT090_RS08740	SM00331	Sigma factor PP2C-like phosphatases
LT090_RS08740	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
LT090_RS08765	SM00220	Serine/Threonine protein kinases, catalytic domain
LT090_RS08770	SM00220	Serine/Threonine protein kinases, catalytic domain
LT090_RS08845	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LT090_RS08865	SM00481	DNA polymerase alpha chain like domain
LT090_RS08925	SM01133	LT090_RS08925
LT090_RS08935	SM00098	Alkaline phosphatase homologues
LT090_RS08955	SM00486	DNA polymerase type-B family
LT090_RS08960	SM00487	DEAD-like helicases superfamily
LT090_RS08960	SM00491	LT090_RS08960
LT090_RS08975	SM00938	Nitrogen regulatory protein P-II
LT090_RS08990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LT090_RS08990	SM00387	Histidine kinase-like ATPases
LT090_RS08990	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS08995	SM00382	ATPases associated with a variety of cellular activities
LT090_RS08995	SM00448	cheY-homologous receiver domain
LT090_RS09005	SM00487	DEAD-like helicases superfamily
LT090_RS09005	SM00490	helicase superfamily c-terminal domain
LT090_RS09120	SM00100	Cyclic nucleotide-monophosphate binding domain
LT090_RS09120	SM00419	helix_turn_helix, cAMP Regulatory protein
LT090_RS09195	SM00411	bacterial (prokaryotic) histone like domain
LT090_RS09200	SM00873	B3/4 domain
LT090_RS09200	SM00874	tRNA synthetase B5 domain
LT090_RS09200	SM00896	Ferredoxin-fold anticodon binding domain
LT090_RS09215	SM00382	ATPases associated with a variety of cellular activities
LT090_RS09245	SM00881	CoA binding domain
LT090_RS09260	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
LT090_RS09280	SM00895	LT090_RS09280
LT090_RS09285	SM00382	ATPases associated with a variety of cellular activities
LT090_RS09335	SM00220	Serine/Threonine protein kinases, catalytic domain
LT090_RS09335	SM00331	Sigma factor PP2C-like phosphatases
LT090_RS09335	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
LT090_RS09350	SM00382	ATPases associated with a variety of cellular activities
LT090_RS09370	SM00448	cheY-homologous receiver domain
LT090_RS09370	SM01012	LT090_RS09370
LT090_RS09385	SM00861	Transketolase, pyrimidine binding domain
LT090_RS09415	SM00631	LT090_RS09415
LT090_RS09420	SM00387	Histidine kinase-like ATPases
LT090_RS09420	SM00448	cheY-homologous receiver domain
LT090_RS09535	SM00479	LT090_RS09535
LT090_RS09545	SM00849	Metallo-beta-lactamase superfamily
LT090_RS09585	SM00382	ATPases associated with a variety of cellular activities
LT090_RS09595	SM01144	LT090_RS09595
LT090_RS09615	SM00729	Elongator protein 3, MiaB family, Radical SAM
LT090_RS09620	SM00382	ATPases associated with a variety of cellular activities
LT090_RS09640	SM00487	DEAD-like helicases superfamily
LT090_RS09640	SM00490	helicase superfamily c-terminal domain
LT090_RS09710	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
LT090_RS09745	SM00849	Metallo-beta-lactamase superfamily
LT090_RS09785	SM00342	helix_turn_helix, arabinose operon control protein
LT090_RS09790	SM00342	helix_turn_helix, arabinose operon control protein
LT090_RS09860	SM00237	Domains in Na-Ca exchangers and integrin-beta4
LT090_RS09875	SM00736	Dystroglycan-type cadherin-like domains.
LT090_RS09880	SM00736	Dystroglycan-type cadherin-like domains.
LT090_RS09935	SM00448	cheY-homologous receiver domain
LT090_RS09935	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS09940	SM00387	Histidine kinase-like ATPases
LT090_RS09985	SM00882	Coenzyme A transferase
LT090_RS09990	SM00882	Coenzyme A transferase
LT090_RS10030	SM00507	HNH nucleases
LT090_RS10060	SM00479	LT090_RS10060
LT090_RS10080	SM00851	MGS-like domain
LT090_RS10095	SM00478	endonuclease III
LT090_RS10095	SM00525	LT090_RS10095
LT090_RS10120	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS10125	SM00342	helix_turn_helix, arabinose operon control protein
LT090_RS10195	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
LT090_RS10195	SM00475	5'-3' exonuclease
LT090_RS10275	SM00977	TilS substrate C-terminal domain
LT090_RS10285	SM00481	DNA polymerase alpha chain like domain
LT090_RS10315	SM00935	Outer membrane protein (OmpH-like)
LT090_RS10325	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
LT090_RS10370	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
LT090_RS10395	SM00382	ATPases associated with a variety of cellular activities
LT090_RS10400	SM00849	Metallo-beta-lactamase superfamily
LT090_RS10420	SM00487	DEAD-like helicases superfamily
LT090_RS10420	SM00490	helicase superfamily c-terminal domain
LT090_RS10420	SM00982	LT090_RS10420
LT090_RS10420	SM01058	CarD-like/TRCF domain
LT090_RS10430	SM00382	ATPases associated with a variety of cellular activities
LT090_RS10440	SM00363	S4 RNA-binding domain
LT090_RS10505	SM01144	LT090_RS10505
LT090_RS10525	SM00341	Helicase and RNase D C-terminal
LT090_RS10525	SM00474	3'-5' exonuclease
LT090_RS10555	SM00487	DEAD-like helicases superfamily
LT090_RS10555	SM00491	LT090_RS10555
LT090_RS10650	SM00387	Histidine kinase-like ATPases
LT090_RS10670	SM00493	LT090_RS10670
LT090_RS10700	SM00354	helix_turn _helix lactose operon repressor
LT090_RS10710	SM00382	ATPases associated with a variety of cellular activities
LT090_RS10720	SM00448	cheY-homologous receiver domain
LT090_RS10730	SM01321	LT090_RS10730
LT090_RS10745	SM00465	GIY-YIG type nucleases (URI domain)
LT090_RS10750	SM00465	GIY-YIG type nucleases (URI domain)
LT090_RS10780	SM00028	Tetratricopeptide repeats
LT090_RS10785	SM00028	Tetratricopeptide repeats
LT090_RS10830	SM00984	UDP binding domain
LT090_RS10925	SM00984	UDP binding domain
LT090_RS10980	SM00984	UDP binding domain
LT090_RS10990	SM00226	Low molecular weight phosphatase family
LT090_RS11000	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
LT090_RS11135	SM01321	LT090_RS11135
LT090_RS11145	SM00487	DEAD-like helicases superfamily
LT090_RS11145	SM00490	helicase superfamily c-terminal domain
LT090_RS11195	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
LT090_RS11195	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
LT090_RS11200	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
LT090_RS11280	SM00936	Penicillin-binding protein 5, C-terminal domain 
LT090_RS11305	SM00729	Elongator protein 3, MiaB family, Radical SAM
LT090_RS11340	SM00463	Small MutS-related domain
LT090_RS11355	SM00052	Putative diguanylate phosphodiesterase
LT090_RS11355	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
LT090_RS11355	SM00091	PAS domain
LT090_RS11355	SM00267	diguanylate cyclase
LT090_RS11395	SM00327	von Willebrand factor (vWF) type A domain
LT090_RS11400	SM00028	Tetratricopeptide repeats
LT090_RS11400	SM00327	von Willebrand factor (vWF) type A domain
LT090_RS11430	SM00052	Putative diguanylate phosphodiesterase
LT090_RS11485	SM00116	Domain in cystathionine beta-synthase and other proteins.
LT090_RS11535	SM00382	ATPases associated with a variety of cellular activities
LT090_RS11595	SM00382	ATPases associated with a variety of cellular activities
LT090_RS11595	SM00448	cheY-homologous receiver domain
LT090_RS11600	SM00091	PAS domain
LT090_RS11600	SM00387	Histidine kinase-like ATPases
LT090_RS11600	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS11610	SM00861	Transketolase, pyrimidine binding domain
LT090_RS11615	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
LT090_RS11730	SM00382	ATPases associated with a variety of cellular activities
LT090_RS11730	SM01086	C-terminal, D2-small domain, of ClpB protein
LT090_RS11740	SM00363	S4 RNA-binding domain
LT090_RS11750	SM00938	Nitrogen regulatory protein P-II
LT090_RS11830	SM00904	Riboflavin kinase
LT090_RS11865	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
LT090_RS11875	SM00927	DNA mismatch repair enzyme MutH
LT090_RS11885	SM00028	Tetratricopeptide repeats
LT090_RS11935	SM00858	LT090_RS11935
LT090_RS11965	SM00342	helix_turn_helix, arabinose operon control protein
LT090_RS11995	SM00382	ATPases associated with a variety of cellular activities
LT090_RS12025	SM00507	HNH nucleases
LT090_RS12075	SM00587	ZnF_C4 abd HLH domain containing kinases domain
LT090_RS12085	SM00382	ATPases associated with a variety of cellular activities
LT090_RS12090	SM00155	Phospholipase D. Active site motifs.
LT090_RS12120	SM00487	DEAD-like helicases superfamily
LT090_RS12120	SM00490	helicase superfamily c-terminal domain
LT090_RS12130	SM00382	ATPases associated with a variety of cellular activities
LT090_RS12215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LT090_RS12215	SM00895	LT090_RS12215
LT090_RS12220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LT090_RS12220	SM00895	LT090_RS12220
LT090_RS12260	SM00342	helix_turn_helix, arabinose operon control protein
LT090_RS12325	SM01011	Aminopeptidase P, N-terminal domain
LT090_RS12350	SM00840	LT090_RS12350
LT090_RS12430	SM00859	Semialdehyde dehydrogenase, NAD binding domain
LT090_RS12440	SM00825	Beta-ketoacyl synthase
LT090_RS12465	SM00344	helix_turn_helix ASNC type
LT090_RS12470	SM00671	Sel1-like repeats.
LT090_RS12480	SM00419	helix_turn_helix, cAMP Regulatory protein
LT090_RS12500	SM00271	DnaJ molecular chaperone homology domain
LT090_RS12510	SM00448	cheY-homologous receiver domain
LT090_RS12510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
LT090_RS12515	SM00062	Bacterial periplasmic substrate-binding proteins
LT090_RS12515	SM00091	PAS domain
LT090_RS12515	SM00387	Histidine kinase-like ATPases
LT090_RS12515	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS12515	SM00448	cheY-homologous receiver domain
LT090_RS12520	SM00448	cheY-homologous receiver domain
LT090_RS12595	SM00028	Tetratricopeptide repeats
LT090_RS12600	SM00382	ATPases associated with a variety of cellular activities
LT090_RS12625	SM01217	LT090_RS12625
LT090_RS12630	SM00354	helix_turn _helix lactose operon repressor
LT090_RS12680	SM00387	Histidine kinase-like ATPases
LT090_RS12680	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS12685	SM00448	cheY-homologous receiver domain
LT090_RS12685	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS12710	SM00981	LT090_RS12710
LT090_RS12725	SM00861	Transketolase, pyrimidine binding domain
LT090_RS12770	SM00271	DnaJ molecular chaperone homology domain
LT090_RS12825	SM01323	LT090_RS12825
LT090_RS12870	SM00836	DALR anticodon binding domain
LT090_RS12870	SM01016	Arginyl tRNA synthetase N terminal dom
LT090_RS12915	SM00382	ATPases associated with a variety of cellular activities
LT090_RS12930	SM00849	Metallo-beta-lactamase superfamily
LT090_RS12965	SM00893	Electron transfer flavoprotein domain
LT090_RS12970	SM00893	Electron transfer flavoprotein domain
LT090_RS13015	SM00859	Semialdehyde dehydrogenase, NAD binding domain
LT090_RS13055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LT090_RS13055	SM00895	LT090_RS13055
LT090_RS13130	SM01154	LT090_RS13130
LT090_RS13180	SM01130	LT090_RS13180
LT090_RS13190	SM00937	LT090_RS13190
LT090_RS13210	SM00487	DEAD-like helicases superfamily
LT090_RS13210	SM00490	helicase superfamily c-terminal domain
LT090_RS13275	SM00382	ATPases associated with a variety of cellular activities
LT090_RS13300	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
LT090_RS13335	SM00852	Probable molybdopterin binding domain
LT090_RS13345	SM00729	Elongator protein 3, MiaB family, Radical SAM
LT090_RS13355	SM00852	Probable molybdopterin binding domain
LT090_RS13385	SM00382	ATPases associated with a variety of cellular activities
LT090_RS13460	SM00267	diguanylate cyclase
LT090_RS13465	SM00054	EF-hand, calcium binding motif
LT090_RS13510	SM00028	Tetratricopeptide repeats
LT090_RS13530	SM00382	ATPases associated with a variety of cellular activities
LT090_RS13565	SM00448	cheY-homologous receiver domain
LT090_RS13565	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS13575	SM00905	Dihydroneopterin aldolase
LT090_RS13635	SM00464	Found in ATP-dependent protease La (LON)
LT090_RS13640	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
LT090_RS13680	SM00487	DEAD-like helicases superfamily
LT090_RS13810	SM00563	Phosphate acyltransferases
LT090_RS13815	SM00434	DNA Topoisomerase IV
LT090_RS13850	SM00387	Histidine kinase-like ATPases
LT090_RS13850	SM00433	TopoisomeraseII
LT090_RS13945	SM00267	diguanylate cyclase
LT090_RS14005	SM01130	LT090_RS14005
LT090_RS14015	SM00448	cheY-homologous receiver domain
LT090_RS14015	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS14050	SM00642	Alpha-amylase domain
LT090_RS14055	SM00327	von Willebrand factor (vWF) type A domain
LT090_RS14060	SM00387	Histidine kinase-like ATPases
LT090_RS14060	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS14065	SM00448	cheY-homologous receiver domain
LT090_RS14065	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS14100	SM00450	Rhodanese Homology Domain
LT090_RS14120	SM00363	S4 RNA-binding domain
LT090_RS14145	SM00859	Semialdehyde dehydrogenase, NAD binding domain
LT090_RS14215	SM00028	Tetratricopeptide repeats
LT090_RS14330	SM01131	LT090_RS14330
LT090_RS14420	SM00382	ATPases associated with a variety of cellular activities
LT090_RS14420	SM01086	C-terminal, D2-small domain, of ClpB protein
LT090_RS14435	SM00487	DEAD-like helicases superfamily
LT090_RS14435	SM00490	helicase superfamily c-terminal domain
LT090_RS14460	SM00448	cheY-homologous receiver domain
LT090_RS14460	SM00850	LytTr DNA-binding domain
LT090_RS14495	SM00829	Enoylreductase
LT090_RS14515	SM00736	Dystroglycan-type cadherin-like domains.
LT090_RS14565	SM00282	Laminin G domain
LT090_RS14590	SM00710	Parallel beta-helix repeats
LT090_RS14650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LT090_RS14650	SM00895	LT090_RS14650
LT090_RS14720	SM00382	ATPases associated with a variety of cellular activities
LT090_RS14725	SM00782	PhnA Zinc-Ribbon
LT090_RS14745	SM00867	YceI-like domain 
LT090_RS14805	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
LT090_RS14805	SM01232	LT090_RS14805
LT090_RS14810	SM00829	Enoylreductase
LT090_RS14880	SM00829	Enoylreductase
LT090_RS14885	SM00450	Rhodanese Homology Domain
LT090_RS14910	SM00341	Helicase and RNase D C-terminal
LT090_RS14910	SM00487	DEAD-like helicases superfamily
LT090_RS14910	SM00490	helicase superfamily c-terminal domain
LT090_RS14910	SM00956	LT090_RS14910
LT090_RS14970	SM01219	LT090_RS14970
LT090_RS15025	SM00342	helix_turn_helix, arabinose operon control protein
LT090_RS15035	SM00563	Phosphate acyltransferases
LT090_RS15055	SM00530	Helix-turn-helix XRE-family like proteins 
LT090_RS15085	SM00859	Semialdehyde dehydrogenase, NAD binding domain
LT090_RS15135	SM00788	Adenylosuccinate synthetase
LT090_RS15145	SM00244	prohibitin homologues
LT090_RS15150	SM00244	prohibitin homologues
LT090_RS15170	SM01340	LT090_RS15170
LT090_RS15175	SM00257	Lysin motif
LT090_RS15175	SM00646	LT090_RS15175
LT090_RS15200	SM00448	cheY-homologous receiver domain
LT090_RS15200	SM00862	Transcriptional regulatory protein, C terminal
LT090_RS15205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LT090_RS15205	SM00387	Histidine kinase-like ATPases
LT090_RS15205	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS15240	SM00450	Rhodanese Homology Domain
LT090_RS15275	SM00028	Tetratricopeptide repeats
LT090_RS15415	SM00382	ATPases associated with a variety of cellular activities
LT090_RS15420	SM00382	ATPases associated with a variety of cellular activities
LT090_RS15420	SM00448	cheY-homologous receiver domain
LT090_RS15425	SM00387	Histidine kinase-like ATPases
LT090_RS15450	SM00882	Coenzyme A transferase
LT090_RS15455	SM00882	Coenzyme A transferase
LT090_RS15465	SM00829	Enoylreductase
LT090_RS15480	SM00028	Tetratricopeptide repeats
LT090_RS15495	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
LT090_RS15510	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
LT090_RS15510	SM00758	LT090_RS15510
LT090_RS15515	SM01038	Beta galactosidase small chain
LT090_RS15525	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
LT090_RS15540	SM00633	Glycosyl hydrolase family 10
LT090_RS15550	SM00354	helix_turn _helix lactose operon repressor
LT090_RS15570	SM01217	LT090_RS15570
LT090_RS15590	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
LT090_RS15620	SM01217	LT090_RS15620
LT090_RS15630	SM00354	helix_turn _helix lactose operon repressor
LT090_RS15640	SM00633	Glycosyl hydrolase family 10
LT090_RS15675	SM00382	ATPases associated with a variety of cellular activities
LT090_RS15720	SM00420	helix_turn_helix, Deoxyribose operon repressor
LT090_RS15720	SM01134	LT090_RS15720
LT090_RS15765	SM00419	helix_turn_helix, cAMP Regulatory protein
LT090_RS15815	SM00822	LT090_RS15815
LT090_RS15840	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
LT090_RS15845	SM00195	Dual specificity phosphatase, catalytic domain
LT090_RS15845	SM00404	Protein tyrosine phosphatase, catalytic domain motif
LT090_RS15850	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
LT090_RS15865	SM00769	Water Stress and Hypersensitive response
LT090_RS15905	SM00736	Dystroglycan-type cadherin-like domains.
LT090_RS15925	SM00829	Enoylreductase
LT090_RS15930	SM00729	Elongator protein 3, MiaB family, Radical SAM
LT090_RS15935	SM00530	Helix-turn-helix XRE-family like proteins 
LT090_RS15975	SM00028	Tetratricopeptide repeats
LT090_RS15990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LT090_RS16060	SM00347	helix_turn_helix multiple antibiotic resistance protein
LT090_RS16135	SM00382	ATPases associated with a variety of cellular activities
LT090_RS16155	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
LT090_RS16155	SM00474	3'-5' exonuclease
LT090_RS16155	SM00475	5'-3' exonuclease
LT090_RS16155	SM00482	DNA polymerase A domain
LT090_RS16195	SM00267	diguanylate cyclase
LT090_RS16205	SM00729	Elongator protein 3, MiaB family, Radical SAM
LT090_RS16235	SM00479	LT090_RS16235
LT090_RS16240	SM00116	Domain in cystathionine beta-synthase and other proteins.
LT090_RS16260	SM00387	Histidine kinase-like ATPases
LT090_RS16260	SM00388	His Kinase A (phosphoacceptor) domain
LT090_RS16260	SM00448	cheY-homologous receiver domain
LT090_RS16265	SM00421	helix_turn_helix, Lux Regulon
LT090_RS16265	SM00448	cheY-homologous receiver domain
LT090_RS16335	SM00903	Flavin reductase like domain
LT090_RS16365	SM00850	LytTr DNA-binding domain
LT090_RS16395	SM00986	Uracil DNA glycosylase superfamily
LT090_RS16395	SM00987	UreE urease accessory protein, C-terminal domain 
LT090_RS16420	SM00849	Metallo-beta-lactamase superfamily
LT090_RS16545	SM00530	Helix-turn-helix XRE-family like proteins 
LT090_RS16555	SM00849	Metallo-beta-lactamase superfamily
LT090_RS16560	SM00894	Excalibur calcium-binding domain
LT090_RS16610	SM01266	LT090_RS16610
LT090_RS16655	SM00812	Alpha-L-fucosidase
LT090_RS16660	SM00342	helix_turn_helix, arabinose operon control protein
LT090_RS16680	SM00382	ATPases associated with a variety of cellular activities
LT090_RS16720	SM00470	ParB-like nuclease domain
LT090_RS16735	SM01228	LT090_RS16735
LT090_RS16755	SM01234	LT090_RS16755
