Tchl_RS00005	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
Tchl_RS00010	SM00480	DNA polymerase III beta subunit
Tchl_RS00015	SM00387	Histidine kinase-like ATPases
Tchl_RS00015	SM00433	TopoisomeraseII
Tchl_RS00065	SM00487	DEAD-like helicases superfamily
Tchl_RS00140	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS00165	SM00729	Elongator protein 3, MiaB family, Radical SAM
Tchl_RS00185	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS00230	SM00244	prohibitin homologues
Tchl_RS00265	SM00841	Elongation factor P, C-terminal
Tchl_RS00265	SM01185	Tchl_RS00265
Tchl_RS00330	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS00345	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Tchl_RS00360	SM00344	helix_turn_helix ASNC type
Tchl_RS00370	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
Tchl_RS00370	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
Tchl_RS00370	SM00493	Tchl_RS00370
Tchl_RS00385	SM00257	Lysin motif
Tchl_RS00410	SM00729	Elongator protein 3, MiaB family, Radical SAM
Tchl_RS00415	SM00769	Water Stress and Hypersensitive response
Tchl_RS00425	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS00445	SM00347	helix_turn_helix multiple antibiotic resistance protein
Tchl_RS00475	SM00917	LeuA allosteric (dimerisation) domain
Tchl_RS00480	SM00344	helix_turn_helix ASNC type
Tchl_RS00535	SM01228	Tchl_RS00535
Tchl_RS00550	SM00470	ParB-like nuclease domain
Tchl_RS00595	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS00610	SM00978	Tchl_RS00610
Tchl_RS00625	SM00448	cheY-homologous receiver domain
Tchl_RS00625	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS00630	SM00387	Histidine kinase-like ATPases
Tchl_RS00630	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS00675	SM00845	GatB domain
Tchl_RS00720	SM00936	Penicillin-binding protein 5, C-terminal domain 
Tchl_RS00740	SM00729	Elongator protein 3, MiaB family, Radical SAM
Tchl_RS00765	SM00530	Helix-turn-helix XRE-family like proteins 
Tchl_RS00780	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Tchl_RS00805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS00805	SM00387	Histidine kinase-like ATPases
Tchl_RS00805	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS00810	SM00448	cheY-homologous receiver domain
Tchl_RS00810	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS00870	SM00746	metallochaperone-like domain
Tchl_RS00925	SM00831	Cation transporter/ATPase, N-terminus
Tchl_RS01070	SM00966	SpoVT / AbrB like domain 
Tchl_RS01110	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS01180	SM00897	FIST N domain
Tchl_RS01180	SM01204	Tchl_RS01180
Tchl_RS01185	SM00072	Guanylate kinase homologues.
Tchl_RS01190	SM01409	Tchl_RS01190
Tchl_RS01195	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Tchl_RS01195	SM00954	Region found in RelA / SpoT proteins
Tchl_RS01205	SM00479	Tchl_RS01205
Tchl_RS01210	SM00100	Cyclic nucleotide-monophosphate binding domain
Tchl_RS01210	SM00419	helix_turn_helix, cAMP Regulatory protein
Tchl_RS01215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS01215	SM00387	Histidine kinase-like ATPases
Tchl_RS01220	SM00421	helix_turn_helix, Lux Regulon
Tchl_RS01220	SM00448	cheY-homologous receiver domain
Tchl_RS01225	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS01270	SM01005	Alanine racemase, C-terminal domain
Tchl_RS01285	SM00530	Helix-turn-helix XRE-family like proteins 
Tchl_RS01370	SM00411	bacterial (prokaryotic) histone like domain
Tchl_RS01475	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS01625	SM00966	SpoVT / AbrB like domain 
Tchl_RS01670	SM00487	DEAD-like helicases superfamily
Tchl_RS01670	SM00490	helicase superfamily c-terminal domain
Tchl_RS01705	SM00530	Helix-turn-helix XRE-family like proteins 
Tchl_RS01745	SM00100	Cyclic nucleotide-monophosphate binding domain
Tchl_RS01745	SM00116	Domain in cystathionine beta-synthase and other proteins.
Tchl_RS01750	SM00479	Tchl_RS01750
Tchl_RS01765	SM00858	Tchl_RS01765
Tchl_RS01810	SM00047	Lysozyme subfamily 2
Tchl_RS01870	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS01900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Tchl_RS02005	SM00028	Tetratricopeptide repeats
Tchl_RS02015	SM00984	UDP binding domain
Tchl_RS02045	SM00530	Helix-turn-helix XRE-family like proteins 
Tchl_RS02125	SM00073	Histidine Phosphotransfer domain
Tchl_RS02125	SM00260	Two component signalling adaptor domain
Tchl_RS02125	SM00387	Histidine kinase-like ATPases
Tchl_RS02125	SM01231	Tchl_RS02125
Tchl_RS02130	SM00260	Two component signalling adaptor domain
Tchl_RS02135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Tchl_RS02135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS02140	SM00138	Methyltransferase, chemotaxis proteins 
Tchl_RS02145	SM00448	cheY-homologous receiver domain
Tchl_RS02150	SM00448	cheY-homologous receiver domain
Tchl_RS02170	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02170	SM00962	SRP54-type protein, GTPase domain
Tchl_RS02190	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02195	SM00062	Bacterial periplasmic substrate-binding proteins
Tchl_RS02195	SM00267	diguanylate cyclase
Tchl_RS02225	SM00487	DEAD-like helicases superfamily
Tchl_RS02225	SM00490	helicase superfamily c-terminal domain
Tchl_RS02240	SM00530	Helix-turn-helix XRE-family like proteins 
Tchl_RS02290	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02300	SM00363	S4 RNA-binding domain
Tchl_RS02305	SM00996	S-adenosyl-L-homocysteine hydrolase
Tchl_RS02305	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Tchl_RS02315	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Tchl_RS02315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS02320	SM00487	DEAD-like helicases superfamily
Tchl_RS02320	SM00490	helicase superfamily c-terminal domain
Tchl_RS02380	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02380	SM00448	cheY-homologous receiver domain
Tchl_RS02385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS02385	SM00387	Histidine kinase-like ATPases
Tchl_RS02385	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS02435	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Tchl_RS02455	SM00981	Tchl_RS02455
Tchl_RS02465	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02500	SM00732	Likely ribonuclease with RNase H fold.
Tchl_RS02545	SM00116	Domain in cystathionine beta-synthase and other proteins.
Tchl_RS02545	SM00924	MgtE intracellular N domain
Tchl_RS02565	SM00955	Tchl_RS02565
Tchl_RS02590	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02590	SM00487	DEAD-like helicases superfamily
Tchl_RS02590	SM00490	helicase superfamily c-terminal domain
Tchl_RS02590	SM00847	Helicase associated domain (HA2)  Add an annotation
Tchl_RS02620	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02660	SM00925	MltA specific insert domain
Tchl_RS02665	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02710	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02710	SM00448	cheY-homologous receiver domain
Tchl_RS02715	SM00387	Histidine kinase-like ATPases
Tchl_RS02715	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS02725	SM01230	Tchl_RS02725
Tchl_RS02735	SM00450	Rhodanese Homology Domain
Tchl_RS02750	SM00155	Phospholipase D. Active site motifs.
Tchl_RS02755	SM00881	CoA binding domain
Tchl_RS02795	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02800	SM00710	Parallel beta-helix repeats
Tchl_RS02800	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
Tchl_RS02810	SM00900	Tchl_RS02810
Tchl_RS02820	SM00387	Histidine kinase-like ATPases
Tchl_RS02825	SM00448	cheY-homologous receiver domain
Tchl_RS02830	SM00267	diguanylate cyclase
Tchl_RS02850	SM01400	Tchl_RS02850
Tchl_RS02870	SM00028	Tetratricopeptide repeats
Tchl_RS02875	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
Tchl_RS02875	SM01232	Tchl_RS02875
Tchl_RS02905	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02905	SM00962	SRP54-type protein, GTPase domain
Tchl_RS02905	SM00963	SRP54-type protein, helical bundle domain
Tchl_RS02910	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02930	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS02945	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS02955	SM00530	Helix-turn-helix XRE-family like proteins 
Tchl_RS02985	SM00729	Elongator protein 3, MiaB family, Radical SAM
Tchl_RS03000	SM01091	Transporter associated domain
Tchl_RS03025	SM00563	Phosphate acyltransferases
Tchl_RS03050	SM00116	Domain in cystathionine beta-synthase and other proteins.
Tchl_RS03080	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS03090	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS03120	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS03210	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Tchl_RS03235	SM00881	CoA binding domain
Tchl_RS03240	SM00240	Forkhead associated domain
Tchl_RS03245	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS03250	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Tchl_RS03250	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS03300	SM00341	Helicase and RNase D C-terminal
Tchl_RS03300	SM00487	DEAD-like helicases superfamily
Tchl_RS03300	SM00490	helicase superfamily c-terminal domain
Tchl_RS03300	SM00956	Tchl_RS03300
Tchl_RS03390	SM00966	SpoVT / AbrB like domain 
Tchl_RS03420	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
Tchl_RS03425	SM01400	Tchl_RS03425
Tchl_RS03430	SM00240	Forkhead associated domain
Tchl_RS03445	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS03445	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS03445	SM00091	PAS domain
Tchl_RS03445	SM00267	diguanylate cyclase
Tchl_RS03490	SM00870	Tchl_RS03490
Tchl_RS03500	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS03540	SM00900	Tchl_RS03540
Tchl_RS03570	SM00487	DEAD-like helicases superfamily
Tchl_RS03570	SM00490	helicase superfamily c-terminal domain
Tchl_RS03595	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
Tchl_RS03620	SM00563	Phosphate acyltransferases
Tchl_RS03630	SM00822	Tchl_RS03630
Tchl_RS03645	SM00825	Beta-ketoacyl synthase
Tchl_RS03695	SM00825	Beta-ketoacyl synthase
Tchl_RS03715	SM01219	Tchl_RS03715
Tchl_RS03725	SM00842	Cell division protein FtsA
Tchl_RS03745	SM00965	Secretin and TonB N terminus short domain
Tchl_RS03760	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Tchl_RS03835	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS03835	SM00387	Histidine kinase-like ATPases
Tchl_RS03835	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS03840	SM00448	cheY-homologous receiver domain
Tchl_RS03840	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS03890	SM00829	Enoylreductase
Tchl_RS03915	SM00644	Tchl_RS03915
Tchl_RS03930	SM00919	Malic enzyme, NAD binding domain
Tchl_RS03930	SM01274	Tchl_RS03930
Tchl_RS03950	SM00346	helix_turn_helix isocitrate lyase regulation
Tchl_RS03990	SM00091	PAS domain
Tchl_RS03990	SM00267	diguanylate cyclase
Tchl_RS03995	SM00363	S4 RNA-binding domain
Tchl_RS04040	SM00487	DEAD-like helicases superfamily
Tchl_RS04100	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS04130	SM00487	DEAD-like helicases superfamily
Tchl_RS04130	SM00490	helicase superfamily c-terminal domain
Tchl_RS04150	SM00450	Rhodanese Homology Domain
Tchl_RS04180	SM00563	Phosphate acyltransferases
Tchl_RS04210	SM00878	Biotin carboxylase C-terminal domain
Tchl_RS04235	SM00749	bacterial OsmY and nodulation domain
Tchl_RS04260	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Tchl_RS04260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS04335	SM00842	Cell division protein FtsA
Tchl_RS04340	SM00864	Tubulin/FtsZ family, GTPase domain
Tchl_RS04340	SM00865	Tubulin/FtsZ family, C-terminal domain
Tchl_RS04450	SM00858	Tchl_RS04450
Tchl_RS04535	SM00530	Helix-turn-helix XRE-family like proteins 
Tchl_RS04560	SM00957	SecA DEAD-like domain
Tchl_RS04560	SM00958	SecA preprotein cross-linking domain
Tchl_RS04575	SM00267	diguanylate cyclase
Tchl_RS04575	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS04605	SM01323	Tchl_RS04605
Tchl_RS04680	SM00507	HNH nucleases
Tchl_RS04705	SM00977	TilS substrate C-terminal domain
Tchl_RS04710	SM00421	helix_turn_helix, Lux Regulon
Tchl_RS04710	SM00448	cheY-homologous receiver domain
Tchl_RS04715	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS04715	SM00091	PAS domain
Tchl_RS04715	SM00387	Histidine kinase-like ATPases
Tchl_RS04715	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS04735	SM00562	Tchl_RS04735
Tchl_RS04745	SM00028	Tetratricopeptide repeats
Tchl_RS04770	SM00564	beta-propeller repeat
Tchl_RS04775	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS04790	SM00244	prohibitin homologues
Tchl_RS04795	SM00244	prohibitin homologues
Tchl_RS04810	SM00788	Adenylosuccinate synthetase
Tchl_RS04825	SM00316	Ribosomal protein S1-like RNA-binding domain
Tchl_RS04825	SM00357	Cold shock protein domain
Tchl_RS04825	SM00955	Tchl_RS04825
Tchl_RS04830	SM00967	RNA 2'-O ribose methyltransferase substrate binding
Tchl_RS04855	SM00220	Serine/Threonine protein kinases, catalytic domain
Tchl_RS04855	SM00331	Sigma factor PP2C-like phosphatases
Tchl_RS04855	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
Tchl_RS04860	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Tchl_RS04865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Tchl_RS04870	SM00448	cheY-homologous receiver domain
Tchl_RS04875	SM00028	Tetratricopeptide repeats
Tchl_RS04875	SM00138	Methyltransferase, chemotaxis proteins 
Tchl_RS04880	SM00073	Histidine Phosphotransfer domain
Tchl_RS04880	SM00260	Two component signalling adaptor domain
Tchl_RS04880	SM00387	Histidine kinase-like ATPases
Tchl_RS04880	SM00448	cheY-homologous receiver domain
Tchl_RS04880	SM01231	Tchl_RS04880
Tchl_RS04885	SM00448	cheY-homologous receiver domain
Tchl_RS04890	SM00267	diguanylate cyclase
Tchl_RS04890	SM00448	cheY-homologous receiver domain
Tchl_RS04895	SM00260	Two component signalling adaptor domain
Tchl_RS04905	SM00267	diguanylate cyclase
Tchl_RS04905	SM01079	Tchl_RS04905
Tchl_RS04935	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS04945	SM00493	Tchl_RS04945
Tchl_RS05035	SM00861	Transketolase, pyrimidine binding domain
Tchl_RS05065	SM00883	Chaperonin 10 Kd subunit
Tchl_RS05075	SM00448	cheY-homologous receiver domain
Tchl_RS05075	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS05080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS05080	SM00387	Histidine kinase-like ATPases
Tchl_RS05080	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS05100	SM00937	Tchl_RS05100
Tchl_RS05120	SM00834	Putative regulatory protein
Tchl_RS05140	SM01091	Transporter associated domain
Tchl_RS05150	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS05150	SM00962	SRP54-type protein, GTPase domain
Tchl_RS05150	SM00963	SRP54-type protein, helical bundle domain
Tchl_RS05160	SM00852	Probable molybdopterin binding domain
Tchl_RS05175	SM00448	cheY-homologous receiver domain
Tchl_RS05175	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Tchl_RS05215	SM00853	MutL C terminal dimerisation domain
Tchl_RS05215	SM01340	Tchl_RS05215
Tchl_RS05410	SM00822	Tchl_RS05410
Tchl_RS05445	SM00347	helix_turn_helix multiple antibiotic resistance protein
Tchl_RS05485	SM00342	helix_turn_helix, arabinose operon control protein
Tchl_RS05495	SM00530	Helix-turn-helix XRE-family like proteins 
Tchl_RS05550	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS05555	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS05565	SM00448	cheY-homologous receiver domain
Tchl_RS05565	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS05570	SM00387	Histidine kinase-like ATPases
Tchl_RS05595	SM01236	Tchl_RS05595
Tchl_RS05600	SM00822	Tchl_RS05600
Tchl_RS05610	SM00448	cheY-homologous receiver domain
Tchl_RS05610	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS05615	SM00387	Histidine kinase-like ATPases
Tchl_RS05615	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS05650	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS05725	SM00965	Secretin and TonB N terminus short domain
Tchl_RS05745	SM00729	Elongator protein 3, MiaB family, Radical SAM
Tchl_RS05760	SM00220	Serine/Threonine protein kinases, catalytic domain
Tchl_RS05835	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Tchl_RS05840	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS05860	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS05880	SM00478	endonuclease III
Tchl_RS05885	SM00903	Flavin reductase like domain
Tchl_RS05895	SM00411	bacterial (prokaryotic) histone like domain
Tchl_RS05900	SM00487	DEAD-like helicases superfamily
Tchl_RS05900	SM00490	helicase superfamily c-terminal domain
Tchl_RS06045	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS06075	SM00387	Histidine kinase-like ATPases
Tchl_RS06075	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS06080	SM00448	cheY-homologous receiver domain
Tchl_RS06080	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS06140	SM00855	Phosphoglycerate mutase family
Tchl_RS06200	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS06305	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS06310	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Tchl_RS06320	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Tchl_RS06320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS06320	SM01049	Tchl_RS06320
Tchl_RS06325	SM00316	Ribosomal protein S1-like RNA-binding domain
Tchl_RS06365	SM00986	Uracil DNA glycosylase superfamily
Tchl_RS06365	SM00987	UreE urease accessory protein, C-terminal domain 
Tchl_RS06380	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
Tchl_RS06380	SM00474	3'-5' exonuclease
Tchl_RS06380	SM00475	5'-3' exonuclease
Tchl_RS06380	SM00482	DNA polymerase A domain
Tchl_RS06405	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS06410	SM00833	Cobalamin synthesis protein cobW C-terminal domain
Tchl_RS06420	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS06420	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS06420	SM00091	PAS domain
Tchl_RS06420	SM00267	diguanylate cyclase
Tchl_RS06480	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS06480	SM01027	Beta-Casp domain
Tchl_RS06520	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS06570	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS06580	SM00822	Tchl_RS06580
Tchl_RS06595	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS06620	SM00342	helix_turn_helix, arabinose operon control protein
Tchl_RS06680	SM00563	Phosphate acyltransferases
Tchl_RS06750	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS06775	SM00387	Histidine kinase-like ATPases
Tchl_RS06775	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS06780	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS06780	SM00448	cheY-homologous receiver domain
Tchl_RS06785	SM00887	Ethylbenzene dehydrogenase
Tchl_RS06825	SM00938	Nitrogen regulatory protein P-II
Tchl_RS06850	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS06860	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS06865	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS06895	SM01018	B12 binding domain
Tchl_RS07025	SM00421	helix_turn_helix, Lux Regulon
Tchl_RS07025	SM00448	cheY-homologous receiver domain
Tchl_RS07030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS07030	SM00091	PAS domain
Tchl_RS07030	SM00387	Histidine kinase-like ATPases
Tchl_RS07060	SM00893	Electron transfer flavoprotein domain
Tchl_RS07065	SM00893	Electron transfer flavoprotein domain
Tchl_RS07070	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Tchl_RS07070	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Tchl_RS07085	SM00506	Appr-1"-p processing enzyme
Tchl_RS07090	SM01400	Tchl_RS07090
Tchl_RS07105	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS07105	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS07105	SM00091	PAS domain
Tchl_RS07105	SM00387	Histidine kinase-like ATPases
Tchl_RS07105	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS07105	SM00448	cheY-homologous receiver domain
Tchl_RS07105	SM01079	Tchl_RS07105
Tchl_RS07110	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS07110	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Tchl_RS07110	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS07110	SM00267	diguanylate cyclase
Tchl_RS07190	SM00881	CoA binding domain
Tchl_RS07200	SM00267	diguanylate cyclase
Tchl_RS07215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS07215	SM00331	Sigma factor PP2C-like phosphatases
Tchl_RS07260	SM00487	DEAD-like helicases superfamily
Tchl_RS07335	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Tchl_RS07355	SM00833	Cobalamin synthesis protein cobW C-terminal domain
Tchl_RS07360	SM00861	Transketolase, pyrimidine binding domain
Tchl_RS07380	SM00829	Enoylreductase
Tchl_RS07410	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS07410	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS07410	SM00091	PAS domain
Tchl_RS07410	SM00267	diguanylate cyclase
Tchl_RS07415	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS07415	SM00267	diguanylate cyclase
Tchl_RS07420	SM00346	helix_turn_helix isocitrate lyase regulation
Tchl_RS07425	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS07450	SM00342	helix_turn_helix, arabinose operon control protein
Tchl_RS07510	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS07510	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS07510	SM00267	diguanylate cyclase
Tchl_RS07510	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS07510	SM00448	cheY-homologous receiver domain
Tchl_RS07515	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS07515	SM00091	PAS domain
Tchl_RS07515	SM00267	diguanylate cyclase
Tchl_RS07570	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Tchl_RS07585	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Tchl_RS07635	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS07645	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS07695	SM00836	DALR anticodon binding domain
Tchl_RS07695	SM01016	Arginyl tRNA synthetase N terminal dom
Tchl_RS07730	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS07770	SM00878	Biotin carboxylase C-terminal domain
Tchl_RS07795	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
Tchl_RS07825	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS07830	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS07855	SM00829	Enoylreductase
Tchl_RS07890	SM00878	Biotin carboxylase C-terminal domain
Tchl_RS07910	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS07910	SM00989	Tchl_RS07910
Tchl_RS07970	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS07970	SM00448	cheY-homologous receiver domain
Tchl_RS07975	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS07975	SM00091	PAS domain
Tchl_RS07975	SM00387	Histidine kinase-like ATPases
Tchl_RS07975	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS07975	SM00989	Tchl_RS07975
Tchl_RS08065	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS08065	SM01086	C-terminal, D2-small domain, of ClpB protein
Tchl_RS08075	SM00671	Sel1-like repeats.
Tchl_RS08100	SM00267	diguanylate cyclase
Tchl_RS08110	SM00244	prohibitin homologues
Tchl_RS08170	SM00965	Secretin and TonB N terminus short domain
Tchl_RS08195	SM00387	Histidine kinase-like ATPases
Tchl_RS08195	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS08195	SM00448	cheY-homologous receiver domain
Tchl_RS08200	SM00448	cheY-homologous receiver domain
Tchl_RS08200	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS08220	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS08275	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS08275	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS08275	SM00091	PAS domain
Tchl_RS08275	SM00267	diguanylate cyclase
Tchl_RS08275	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS08335	SM00421	helix_turn_helix, Lux Regulon
Tchl_RS08340	SM00448	cheY-homologous receiver domain
Tchl_RS08340	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS08345	SM00387	Histidine kinase-like ATPases
Tchl_RS08345	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS08375	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS08390	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS08415	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS08425	SM00421	helix_turn_helix, Lux Regulon
Tchl_RS08440	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS08440	SM00267	diguanylate cyclase
Tchl_RS08440	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS08465	SM01091	Transporter associated domain
Tchl_RS08470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Tchl_RS08470	SM00895	Tchl_RS08470
Tchl_RS08490	SM00878	Biotin carboxylase C-terminal domain
Tchl_RS08535	SM00421	helix_turn_helix, Lux Regulon
Tchl_RS08535	SM00448	cheY-homologous receiver domain
Tchl_RS08545	SM00448	cheY-homologous receiver domain
Tchl_RS08565	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS08570	SM00858	Tchl_RS08570
Tchl_RS08605	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS08620	SM00028	Tetratricopeptide repeats
Tchl_RS08630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS08630	SM00387	Histidine kinase-like ATPases
Tchl_RS08630	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS08630	SM00448	cheY-homologous receiver domain
Tchl_RS08635	SM00421	helix_turn_helix, Lux Regulon
Tchl_RS08635	SM00448	cheY-homologous receiver domain
Tchl_RS08675	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
Tchl_RS08680	SM00649	Ribosomal protein L11/L12
Tchl_RS08705	SM00663	RNA polymerase I subunit A N-terminus
Tchl_RS08720	SM00838	Elongation factor G C-terminus
Tchl_RS08720	SM00889	Elongation factor G, domain IV
Tchl_RS08730	SM01403	Tchl_RS08730
Tchl_RS08750	SM01382	Tchl_RS08750
Tchl_RS08750	SM01383	Tchl_RS08750
Tchl_RS08765	SM00322	K homology RNA-binding domain
Tchl_RS08785	SM01374	Tchl_RS08785
Tchl_RS08790	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Tchl_RS08840	SM00316	Ribosomal protein S1-like RNA-binding domain
Tchl_RS08860	SM00363	S4 RNA-binding domain
Tchl_RS08860	SM01390	Tchl_RS08860
Tchl_RS08865	SM00662	RNA polymerases D
Tchl_RS08880	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS08895	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS08965	SM00487	DEAD-like helicases superfamily
Tchl_RS08965	SM00490	helicase superfamily c-terminal domain
Tchl_RS08980	SM01101	Tchl_RS08980
Tchl_RS09025	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS09035	SM01007	Class II Aldolase and Adducin N-terminal domain
Tchl_RS09065	SM00387	Histidine kinase-like ATPases
Tchl_RS09065	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS09070	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS09070	SM00448	cheY-homologous receiver domain
Tchl_RS09170	SM01209	Tchl_RS09170
Tchl_RS09170	SM01210	Tchl_RS09170
Tchl_RS09175	SM00798	AICARFT/IMPCHase bienzyme
Tchl_RS09175	SM00851	MGS-like domain
Tchl_RS09285	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS09290	SM00829	Enoylreductase
Tchl_RS09300	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
Tchl_RS09340	SM00331	Sigma factor PP2C-like phosphatases
Tchl_RS09340	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
Tchl_RS09345	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Tchl_RS09345	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Tchl_RS09360	SM00487	DEAD-like helicases superfamily
Tchl_RS09360	SM00490	helicase superfamily c-terminal domain
Tchl_RS09400	SM00867	YceI-like domain 
Tchl_RS09405	SM00867	YceI-like domain 
Tchl_RS09415	SM01049	Tchl_RS09415
Tchl_RS09470	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS09480	SM00852	Probable molybdopterin binding domain
Tchl_RS09500	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Tchl_RS09510	SM01092	CO dehydrogenase flavoprotein C-terminal domain
Tchl_RS09550	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Tchl_RS09550	SM00895	Tchl_RS09550
Tchl_RS09565	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
Tchl_RS09585	SM00073	Histidine Phosphotransfer domain
Tchl_RS09585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS09585	SM00387	Histidine kinase-like ATPases
Tchl_RS09600	SM00448	cheY-homologous receiver domain
Tchl_RS09610	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS09615	SM00062	Bacterial periplasmic substrate-binding proteins
Tchl_RS09615	SM00387	Histidine kinase-like ATPases
Tchl_RS09615	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS09620	SM00448	cheY-homologous receiver domain
Tchl_RS09625	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS09625	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS09625	SM00091	PAS domain
Tchl_RS09625	SM00267	diguanylate cyclase
Tchl_RS09625	SM00448	cheY-homologous receiver domain
Tchl_RS09780	SM00917	LeuA allosteric (dimerisation) domain
Tchl_RS09810	SM00831	Cation transporter/ATPase, N-terminus
Tchl_RS09830	SM00116	Domain in cystathionine beta-synthase and other proteins.
Tchl_RS09910	SM00974	Tchl_RS09910
Tchl_RS09925	SM00507	HNH nucleases
Tchl_RS09980	SM00318	Staphylococcal nuclease homologues
Tchl_RS10035	SM00400	zinc finger
Tchl_RS10035	SM00493	Tchl_RS10035
Tchl_RS10035	SM00766	DNA primase DnaG DnaB-binding
Tchl_RS10050	SM01207	Tchl_RS10050
Tchl_RS10055	SM00905	Dihydroneopterin aldolase
Tchl_RS10060	SM00528	Domain in histone-like proteins of HNS family
Tchl_RS10115	SM00919	Malic enzyme, NAD binding domain
Tchl_RS10115	SM01274	Tchl_RS10115
Tchl_RS10120	SM00829	Enoylreductase
Tchl_RS10125	SM00481	DNA polymerase alpha chain like domain
Tchl_RS10130	SM00650	Ribosomal RNA adenine dimethylases
Tchl_RS10160	SM01011	Aminopeptidase P, N-terminal domain
Tchl_RS10175	SM00419	helix_turn_helix, cAMP Regulatory protein
Tchl_RS10185	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Tchl_RS10190	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS10190	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS10190	SM00267	diguanylate cyclase
Tchl_RS10235	SM00840	Tchl_RS10235
Tchl_RS10245	SM00271	DnaJ molecular chaperone homology domain
Tchl_RS10260	SM00434	DNA Topoisomerase IV
Tchl_RS10270	SM00830	Chorismate mutase type II
Tchl_RS10290	SM00316	Ribosomal protein S1-like RNA-binding domain
Tchl_RS10295	SM00411	bacterial (prokaryotic) histone like domain
Tchl_RS10305	SM00028	Tetratricopeptide repeats
Tchl_RS10345	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Tchl_RS10370	SM00873	B3/4 domain
Tchl_RS10370	SM00874	tRNA synthetase B5 domain
Tchl_RS10370	SM00896	Ferredoxin-fold anticodon binding domain
Tchl_RS10375	SM00411	bacterial (prokaryotic) histone like domain
Tchl_RS10380	SM00422	helix_turn_helix, mercury resistance
Tchl_RS10400	SM00257	Lysin motif
Tchl_RS10430	SM01130	Tchl_RS10430
Tchl_RS10570	SM00422	helix_turn_helix, mercury resistance
Tchl_RS10585	SM00900	Tchl_RS10585
Tchl_RS10610	SM00932	Scaffold protein Nfu/NifU N terminal
Tchl_RS10615	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
Tchl_RS10635	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Tchl_RS10635	SM00091	PAS domain
Tchl_RS10635	SM00387	Histidine kinase-like ATPases
Tchl_RS10635	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS10635	SM00448	cheY-homologous receiver domain
Tchl_RS10640	SM00448	cheY-homologous receiver domain
Tchl_RS10640	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS10675	SM00347	helix_turn_helix multiple antibiotic resistance protein
Tchl_RS10685	SM00881	CoA binding domain
Tchl_RS10735	SM00116	Domain in cystathionine beta-synthase and other proteins.
Tchl_RS10805	SM00822	Tchl_RS10805
Tchl_RS10820	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS10825	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS10835	SM00434	DNA Topoisomerase IV
Tchl_RS10840	SM00387	Histidine kinase-like ATPases
Tchl_RS10840	SM00433	TopoisomeraseII
Tchl_RS10880	SM01192	Tchl_RS10880
Tchl_RS10880	SM01193	Tchl_RS10880
Tchl_RS10930	SM01322	Tchl_RS10930
Tchl_RS10935	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS10935	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS10935	SM00091	PAS domain
Tchl_RS10935	SM00267	diguanylate cyclase
Tchl_RS10940	SM00487	DEAD-like helicases superfamily
Tchl_RS10940	SM00490	helicase superfamily c-terminal domain
Tchl_RS10945	SM00357	Cold shock protein domain
Tchl_RS10955	SM00481	DNA polymerase alpha chain like domain
Tchl_RS10985	SM00363	S4 RNA-binding domain
Tchl_RS10995	SM00316	Ribosomal protein S1-like RNA-binding domain
Tchl_RS11015	SM01387	Tchl_RS11015
Tchl_RS11020	SM00316	Ribosomal protein S1-like RNA-binding domain
Tchl_RS11020	SM00322	K homology RNA-binding domain
Tchl_RS11105	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS11130	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Tchl_RS11130	SM00267	diguanylate cyclase
Tchl_RS11160	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
Tchl_RS11165	SM00448	cheY-homologous receiver domain
Tchl_RS11170	SM00073	Histidine Phosphotransfer domain
Tchl_RS11175	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS11175	SM00448	cheY-homologous receiver domain
Tchl_RS11180	SM00073	Histidine Phosphotransfer domain
Tchl_RS11180	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS11180	SM00091	PAS domain
Tchl_RS11180	SM00387	Histidine kinase-like ATPases
Tchl_RS11180	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS11180	SM00448	cheY-homologous receiver domain
Tchl_RS11180	SM01079	Tchl_RS11180
Tchl_RS11240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Tchl_RS11240	SM00866	Tchl_RS11240
Tchl_RS11250	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS11265	SM00903	Flavin reductase like domain
Tchl_RS11295	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Tchl_RS11305	SM00861	Transketolase, pyrimidine binding domain
Tchl_RS11320	SM00797	Allophanate hydrolase subunit 2
Tchl_RS11325	SM00796	Allophanate hydrolase subunit 1
Tchl_RS11385	SM00729	Elongator protein 3, MiaB family, Radical SAM
Tchl_RS11390	SM00450	Rhodanese Homology Domain
Tchl_RS11405	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS11410	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS11430	SM00479	Tchl_RS11430
Tchl_RS11510	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS11510	SM00091	PAS domain
Tchl_RS11510	SM00267	diguanylate cyclase
Tchl_RS11520	SM00421	helix_turn_helix, Lux Regulon
Tchl_RS11520	SM00448	cheY-homologous receiver domain
Tchl_RS11555	SM00965	Secretin and TonB N terminus short domain
Tchl_RS11605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Tchl_RS11605	SM00866	Tchl_RS11605
Tchl_RS11640	SM00861	Transketolase, pyrimidine binding domain
Tchl_RS11660	SM00487	DEAD-like helicases superfamily
Tchl_RS11660	SM00491	Tchl_RS11660
Tchl_RS11670	SM00852	Probable molybdopterin binding domain
Tchl_RS11765	SM00248	ankyrin repeats
Tchl_RS11775	SM00346	helix_turn_helix isocitrate lyase regulation
Tchl_RS11800	SM00342	helix_turn_helix, arabinose operon control protein
Tchl_RS11810	SM01092	CO dehydrogenase flavoprotein C-terminal domain
Tchl_RS11815	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Tchl_RS11825	SM00347	helix_turn_helix multiple antibiotic resistance protein
Tchl_RS11830	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS11835	SM00327	von Willebrand factor (vWF) type A domain
Tchl_RS11870	SM00729	Elongator protein 3, MiaB family, Radical SAM
Tchl_RS11885	SM00670	Large family of predicted nucleotide-binding domains
Tchl_RS11910	SM00487	DEAD-like helicases superfamily
Tchl_RS11910	SM00490	helicase superfamily c-terminal domain
Tchl_RS11915	SM00226	Low molecular weight phosphatase family
Tchl_RS11920	SM00316	Ribosomal protein S1-like RNA-binding domain
Tchl_RS11930	SM00363	S4 RNA-binding domain
Tchl_RS11970	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Tchl_RS11975	SM00822	Tchl_RS11975
Tchl_RS11985	SM00825	Beta-ketoacyl synthase
Tchl_RS12020	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Tchl_RS12045	SM00358	Double-stranded RNA binding motif
Tchl_RS12045	SM00535	Ribonuclease III family
Tchl_RS12075	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Tchl_RS12075	SM00465	GIY-YIG type nucleases (URI domain)
Tchl_RS12105	SM00729	Elongator protein 3, MiaB family, Radical SAM
Tchl_RS12255	SM00966	SpoVT / AbrB like domain 
Tchl_RS12285	SM00422	helix_turn_helix, mercury resistance
Tchl_RS12345	SM00248	ankyrin repeats
Tchl_RS12390	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS12405	SM00448	cheY-homologous receiver domain
Tchl_RS12405	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Tchl_RS12410	SM00062	Bacterial periplasmic substrate-binding proteins
Tchl_RS12410	SM00073	Histidine Phosphotransfer domain
Tchl_RS12410	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS12410	SM00091	PAS domain
Tchl_RS12410	SM00387	Histidine kinase-like ATPases
Tchl_RS12410	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS12410	SM00448	cheY-homologous receiver domain
Tchl_RS12440	SM00861	Transketolase, pyrimidine binding domain
Tchl_RS12485	SM00904	Riboflavin kinase
Tchl_RS12490	SM00646	Tchl_RS12490
Tchl_RS12590	SM00448	cheY-homologous receiver domain
Tchl_RS12610	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS12740	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS12740	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Tchl_RS12740	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS12740	SM00091	PAS domain
Tchl_RS12740	SM00267	diguanylate cyclase
Tchl_RS12760	SM00387	Histidine kinase-like ATPases
Tchl_RS12760	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS12765	SM00448	cheY-homologous receiver domain
Tchl_RS12770	SM00479	Tchl_RS12770
Tchl_RS12785	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS12785	SM01086	C-terminal, D2-small domain, of ClpB protein
Tchl_RS12820	SM00100	Cyclic nucleotide-monophosphate binding domain
Tchl_RS12820	SM00419	helix_turn_helix, cAMP Regulatory protein
Tchl_RS12835	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Tchl_RS12855	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Tchl_RS12855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS12855	SM00387	Histidine kinase-like ATPases
Tchl_RS12860	SM00421	helix_turn_helix, Lux Regulon
Tchl_RS12860	SM00448	cheY-homologous receiver domain
Tchl_RS12865	SM00347	helix_turn_helix multiple antibiotic resistance protein
Tchl_RS12890	SM00116	Domain in cystathionine beta-synthase and other proteins.
Tchl_RS12890	SM01240	Tchl_RS12890
Tchl_RS12940	SM00487	DEAD-like helicases superfamily
Tchl_RS12950	SM00530	Helix-turn-helix XRE-family like proteins 
Tchl_RS12955	SM00487	DEAD-like helicases superfamily
Tchl_RS12955	SM00490	helicase superfamily c-terminal domain
Tchl_RS13010	SM00887	Ethylbenzene dehydrogenase
Tchl_RS13045	SM00729	Elongator protein 3, MiaB family, Radical SAM
Tchl_RS13060	SM00100	Cyclic nucleotide-monophosphate binding domain
Tchl_RS13060	SM00419	helix_turn_helix, cAMP Regulatory protein
Tchl_RS13065	SM00327	von Willebrand factor (vWF) type A domain
Tchl_RS13095	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Tchl_RS13110	SM00646	Tchl_RS13110
Tchl_RS13130	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS13155	SM00479	Tchl_RS13155
Tchl_RS13160	SM00116	Domain in cystathionine beta-synthase and other proteins.
Tchl_RS13165	SM00670	Large family of predicted nucleotide-binding domains
Tchl_RS13230	SM00316	Ribosomal protein S1-like RNA-binding domain
Tchl_RS13230	SM00732	Likely ribonuclease with RNase H fold.
Tchl_RS13240	SM00881	CoA binding domain
Tchl_RS13250	SM00450	Rhodanese Homology Domain
Tchl_RS13265	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS13300	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS13300	SM00267	diguanylate cyclase
Tchl_RS13305	SM00487	DEAD-like helicases superfamily
Tchl_RS13305	SM00490	helicase superfamily c-terminal domain
Tchl_RS13305	SM00982	Tchl_RS13305
Tchl_RS13305	SM01058	CarD-like/TRCF domain
Tchl_RS13350	SM00954	Region found in RelA / SpoT proteins
Tchl_RS13370	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS13400	SM00893	Electron transfer flavoprotein domain
Tchl_RS13405	SM00893	Electron transfer flavoprotein domain
Tchl_RS13435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS13435	SM00387	Histidine kinase-like ATPases
Tchl_RS13435	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS13440	SM00448	cheY-homologous receiver domain
Tchl_RS13440	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS13460	SM00986	Uracil DNA glycosylase superfamily
Tchl_RS13460	SM00987	UreE urease accessory protein, C-terminal domain 
Tchl_RS13475	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS13500	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Tchl_RS13505	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
Tchl_RS13535	SM00387	Histidine kinase-like ATPases
Tchl_RS13535	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS13540	SM00448	cheY-homologous receiver domain
Tchl_RS13540	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS13570	SM01018	B12 binding domain
Tchl_RS13610	SM00670	Large family of predicted nucleotide-binding domains
Tchl_RS13710	SM00062	Bacterial periplasmic substrate-binding proteins
Tchl_RS13715	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS13740	SM00530	Helix-turn-helix XRE-family like proteins 
Tchl_RS13775	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS13805	SM00966	SpoVT / AbrB like domain 
Tchl_RS13810	SM00248	ankyrin repeats
Tchl_RS13815	SM00631	Tchl_RS13815
Tchl_RS13855	SM00967	RNA 2'-O ribose methyltransferase substrate binding
Tchl_RS13885	SM00935	Outer membrane protein (OmpH-like)
Tchl_RS13895	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Tchl_RS13940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Tchl_RS13955	SM00838	Elongation factor G C-terminus
Tchl_RS13965	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Tchl_RS13965	SM00292	breast cancer carboxy-terminal domain
Tchl_RS13965	SM00532	Ligase N family
Tchl_RS13970	SM00771	ZipA, C-terminal domain (FtsZ-binding)
Tchl_RS14065	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
Tchl_RS14065	SM00534	ATPase domain of DNA mismatch repair MUTS family
Tchl_RS14080	SM00116	Domain in cystathionine beta-synthase and other proteins.
Tchl_RS14085	SM00479	Tchl_RS14085
Tchl_RS14245	SM00470	ParB-like nuclease domain
Tchl_RS14285	SM00530	Helix-turn-helix XRE-family like proteins 
Tchl_RS14350	SM00470	ParB-like nuclease domain
Tchl_RS14375	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS14385	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS14410	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Tchl_RS14415	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Tchl_RS14425	SM00248	ankyrin repeats
Tchl_RS14470	SM00448	cheY-homologous receiver domain
Tchl_RS14470	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS14475	SM00387	Histidine kinase-like ATPases
Tchl_RS14475	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS14485	SM00422	helix_turn_helix, mercury resistance
Tchl_RS14525	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Tchl_RS14530	SM00267	diguanylate cyclase
Tchl_RS14570	SM00411	bacterial (prokaryotic) histone like domain
Tchl_RS14575	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS14575	SM00464	Found in ATP-dependent protease La (LON)
Tchl_RS14580	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS14580	SM00994	ClpX C4-type zinc finger
Tchl_RS14580	SM01086	C-terminal, D2-small domain, of ClpB protein
Tchl_RS14595	SM00763	PrkA AAA domain
Tchl_RS14635	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS14645	SM00843	Tchl_RS14645
Tchl_RS14650	SM00100	Cyclic nucleotide-monophosphate binding domain
Tchl_RS14650	SM00419	helix_turn_helix, cAMP Regulatory protein
Tchl_RS14660	SM00463	Small MutS-related domain
Tchl_RS14665	SM00938	Nitrogen regulatory protein P-II
Tchl_RS14715	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Tchl_RS14720	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
Tchl_RS14765	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Tchl_RS14770	SM00226	Low molecular weight phosphatase family
Tchl_RS14780	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS14800	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS14830	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS14840	SM01103	Tchl_RS14840
Tchl_RS14850	SM00851	MGS-like domain
Tchl_RS14850	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
Tchl_RS14855	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
Tchl_RS14860	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS14860	SM00091	PAS domain
Tchl_RS14860	SM00387	Histidine kinase-like ATPases
Tchl_RS14860	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS14860	SM00448	cheY-homologous receiver domain
Tchl_RS14900	SM00220	Serine/Threonine protein kinases, catalytic domain
Tchl_RS14970	SM00881	CoA binding domain
Tchl_RS14990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Tchl_RS14990	SM00895	Tchl_RS14990
Tchl_RS15015	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS15015	SM00448	cheY-homologous receiver domain
Tchl_RS15020	SM00387	Histidine kinase-like ATPases
Tchl_RS15020	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS15060	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS15065	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS15090	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS15090	SM00448	cheY-homologous receiver domain
Tchl_RS15095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS15095	SM00387	Histidine kinase-like ATPases
Tchl_RS15095	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS15100	SM00893	Electron transfer flavoprotein domain
Tchl_RS15105	SM00893	Electron transfer flavoprotein domain
Tchl_RS15125	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS15130	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS15150	SM00342	helix_turn_helix, arabinose operon control protein
Tchl_RS15260	SM00945	ProQ/FINO family
Tchl_RS15275	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
Tchl_RS15275	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
Tchl_RS15285	SM00421	helix_turn_helix, Lux Regulon
Tchl_RS15295	SM00903	Flavin reductase like domain
Tchl_RS15345	SM00090	RIO-like kinase
Tchl_RS15405	SM00857	Resolvase, N terminal domain
Tchl_RS15410	SM00014	Acid phosphatase homologues
Tchl_RS15420	SM00422	helix_turn_helix, mercury resistance
Tchl_RS15445	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS15515	SM00346	helix_turn_helix isocitrate lyase regulation
Tchl_RS15545	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS15565	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS15580	SM00746	metallochaperone-like domain
Tchl_RS15640	SM00448	cheY-homologous receiver domain
Tchl_RS15640	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS15645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS15645	SM00387	Histidine kinase-like ATPases
Tchl_RS15645	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS15665	SM00090	RIO-like kinase
Tchl_RS15675	SM00342	helix_turn_helix, arabinose operon control protein
Tchl_RS15725	SM01001	AIR carboxylase
Tchl_RS15735	SM01091	Transporter associated domain
Tchl_RS15740	SM00421	helix_turn_helix, Lux Regulon
Tchl_RS15740	SM00448	cheY-homologous receiver domain
Tchl_RS15745	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS15745	SM00091	PAS domain
Tchl_RS15745	SM00387	Histidine kinase-like ATPases
Tchl_RS15745	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS15785	SM01211	Tchl_RS15785
Tchl_RS15945	SM00900	Tchl_RS15945
Tchl_RS15955	SM00478	endonuclease III
Tchl_RS15955	SM00525	Tchl_RS15955
Tchl_RS15980	SM00478	endonuclease III
Tchl_RS15980	SM01009	AlkA N-terminal domain
Tchl_RS16040	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS16050	SM00347	helix_turn_helix multiple antibiotic resistance protein
Tchl_RS16060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Tchl_RS16060	SM00895	Tchl_RS16060
Tchl_RS16075	SM00387	Histidine kinase-like ATPases
Tchl_RS16115	SM00073	Histidine Phosphotransfer domain
Tchl_RS16115	SM00260	Two component signalling adaptor domain
Tchl_RS16115	SM00387	Histidine kinase-like ATPases
Tchl_RS16115	SM01231	Tchl_RS16115
Tchl_RS16125	SM00448	cheY-homologous receiver domain
Tchl_RS16130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Tchl_RS16135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS16135	SM00387	Histidine kinase-like ATPases
Tchl_RS16135	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS16140	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS16140	SM00387	Histidine kinase-like ATPases
Tchl_RS16140	SM00448	cheY-homologous receiver domain
Tchl_RS16145	SM00421	helix_turn_helix, Lux Regulon
Tchl_RS16145	SM00448	cheY-homologous receiver domain
Tchl_RS16150	SM00052	Putative diguanylate phosphodiesterase
Tchl_RS16150	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Tchl_RS16150	SM00091	PAS domain
Tchl_RS16150	SM00267	diguanylate cyclase
Tchl_RS16150	SM00448	cheY-homologous receiver domain
Tchl_RS16175	SM00422	helix_turn_helix, mercury resistance
Tchl_RS16185	SM00729	Elongator protein 3, MiaB family, Radical SAM
Tchl_RS16190	SM00100	Cyclic nucleotide-monophosphate binding domain
Tchl_RS16190	SM00419	helix_turn_helix, cAMP Regulatory protein
Tchl_RS16200	SM00100	Cyclic nucleotide-monophosphate binding domain
Tchl_RS16200	SM00419	helix_turn_helix, cAMP Regulatory protein
Tchl_RS16205	SM00849	Metallo-beta-lactamase superfamily
Tchl_RS16205	SM01027	Beta-Casp domain
Tchl_RS16285	SM00838	Elongation factor G C-terminus
Tchl_RS16285	SM00889	Elongation factor G, domain IV
Tchl_RS16310	SM01329	Tchl_RS16310
Tchl_RS16360	SM00357	Cold shock protein domain
Tchl_RS16370	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS16370	SM01086	C-terminal, D2-small domain, of ClpB protein
Tchl_RS16395	SM00448	cheY-homologous receiver domain
Tchl_RS16395	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS16400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS16400	SM00387	Histidine kinase-like ATPases
Tchl_RS16400	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS16410	SM00450	Rhodanese Homology Domain
Tchl_RS16420	SM00363	S4 RNA-binding domain
Tchl_RS16435	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Tchl_RS16505	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS16505	SM00448	cheY-homologous receiver domain
Tchl_RS16535	SM00880	Tchl_RS16535
Tchl_RS16535	SM01118	Tchl_RS16535
Tchl_RS16540	SM00855	Phosphoglycerate mutase family
Tchl_RS16600	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Tchl_RS16645	SM00852	Probable molybdopterin binding domain
Tchl_RS16665	SM00855	Phosphoglycerate mutase family
Tchl_RS16710	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Tchl_RS16710	SM00245	tail specific protease
Tchl_RS16720	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Tchl_RS16725	SM00450	Rhodanese Homology Domain
Tchl_RS16760	SM00729	Elongator protein 3, MiaB family, Radical SAM
Tchl_RS16760	SM00876	Biotin and Thiamin Synthesis associated domain
Tchl_RS16775	SM01004	Delta-aminolevulinic acid dehydratase
Tchl_RS16790	SM00852	Probable molybdopterin binding domain
Tchl_RS16860	SM00861	Transketolase, pyrimidine binding domain
Tchl_RS16865	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Tchl_RS16945	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Tchl_RS16950	SM01329	Tchl_RS16950
Tchl_RS17000	SM00116	Domain in cystathionine beta-synthase and other proteins.
Tchl_RS17015	SM00357	Cold shock protein domain
Tchl_RS17015	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS17015	SM00959	Rho termination factor, N-terminal domain
Tchl_RS17070	SM00729	Elongator protein 3, MiaB family, Radical SAM
Tchl_RS17080	SM00822	Tchl_RS17080
Tchl_RS17085	SM00822	Tchl_RS17085
Tchl_RS17125	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Tchl_RS17130	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
Tchl_RS17150	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS17155	SM00382	ATPases associated with a variety of cellular activities
Tchl_RS17340	SM00448	cheY-homologous receiver domain
Tchl_RS17340	SM00862	Transcriptional regulatory protein, C terminal
Tchl_RS17345	SM00387	Histidine kinase-like ATPases
Tchl_RS17345	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS17355	SM00947	Carbonic anhydrase
Tchl_RS17370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Tchl_RS17375	SM00487	DEAD-like helicases superfamily
Tchl_RS17375	SM00490	helicase superfamily c-terminal domain
Tchl_RS17395	SM00448	cheY-homologous receiver domain
Tchl_RS17400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Tchl_RS17400	SM00387	Histidine kinase-like ATPases
Tchl_RS17400	SM00388	His Kinase A (phosphoacceptor) domain
Tchl_RS17505	SM01234	Tchl_RS17505
