AC731_RS00020	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS00020	SM00387	Histidine kinase-like ATPases
AC731_RS00020	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS00025	SM00448	cheY-homologous receiver domain
AC731_RS00025	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS00045	SM00382	ATPases associated with a variety of cellular activities
AC731_RS00045	SM01086	C-terminal, D2-small domain, of ClpB protein
AC731_RS00055	SM00357	Cold shock protein domain
AC731_RS00105	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC731_RS00165	SM00838	Elongation factor G C-terminus
AC731_RS00165	SM00889	Elongation factor G, domain IV
AC731_RS00215	SM00822	AC731_RS00215
AC731_RS00220	SM00746	metallochaperone-like domain
AC731_RS00270	SM00849	Metallo-beta-lactamase superfamily
AC731_RS00270	SM01027	Beta-Casp domain
AC731_RS00280	SM00100	Cyclic nucleotide-monophosphate binding domain
AC731_RS00280	SM00419	helix_turn_helix, cAMP Regulatory protein
AC731_RS00290	SM00100	Cyclic nucleotide-monophosphate binding domain
AC731_RS00290	SM00419	helix_turn_helix, cAMP Regulatory protein
AC731_RS00295	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS00305	SM00422	helix_turn_helix, mercury resistance
AC731_RS00325	SM00448	cheY-homologous receiver domain
AC731_RS00330	SM00138	Methyltransferase, chemotaxis proteins 
AC731_RS00340	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS00340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS00345	SM00260	Two component signalling adaptor domain
AC731_RS00350	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS00350	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS00355	SM00073	Histidine Phosphotransfer domain
AC731_RS00355	SM00260	Two component signalling adaptor domain
AC731_RS00355	SM00387	Histidine kinase-like ATPases
AC731_RS00355	SM01231	AC731_RS00355
AC731_RS00365	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS00370	SM00448	cheY-homologous receiver domain
AC731_RS00395	SM00052	Putative diguanylate phosphodiesterase
AC731_RS00395	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS00395	SM00091	PAS domain
AC731_RS00395	SM00267	diguanylate cyclase
AC731_RS00400	SM00448	cheY-homologous receiver domain
AC731_RS00405	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS00405	SM00091	PAS domain
AC731_RS00405	SM00387	Histidine kinase-like ATPases
AC731_RS00405	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS00405	SM00448	cheY-homologous receiver domain
AC731_RS00410	SM00052	Putative diguanylate phosphodiesterase
AC731_RS00410	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS00410	SM00091	PAS domain
AC731_RS00410	SM00267	diguanylate cyclase
AC731_RS00425	SM00382	ATPases associated with a variety of cellular activities
AC731_RS00430	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC731_RS00435	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AC731_RS00445	SM00671	Sel1-like repeats.
AC731_RS00475	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC731_RS00480	SM00421	helix_turn_helix, Lux Regulon
AC731_RS00480	SM00448	cheY-homologous receiver domain
AC731_RS00485	SM00387	Histidine kinase-like ATPases
AC731_RS00485	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS00515	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS00515	SM01049	AC731_RS00515
AC731_RS00520	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS00520	SM01049	AC731_RS00520
AC731_RS00525	SM00387	Histidine kinase-like ATPases
AC731_RS00530	SM00382	ATPases associated with a variety of cellular activities
AC731_RS00535	SM00382	ATPases associated with a variety of cellular activities
AC731_RS00560	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC731_RS00570	SM00363	S4 RNA-binding domain
AC731_RS00590	SM00822	AC731_RS00590
AC731_RS00595	SM00822	AC731_RS00595
AC731_RS00605	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS00655	SM00357	Cold shock protein domain
AC731_RS00655	SM00382	ATPases associated with a variety of cellular activities
AC731_RS00655	SM00959	Rho termination factor, N-terminal domain
AC731_RS00670	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS00720	SM01329	AC731_RS00720
AC731_RS00725	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AC731_RS00805	SM00840	AC731_RS00805
AC731_RS00810	SM00271	DnaJ molecular chaperone homology domain
AC731_RS00830	SM00434	DNA Topoisomerase IV
AC731_RS00840	SM00830	Chorismate mutase type II
AC731_RS00860	SM00316	Ribosomal protein S1-like RNA-binding domain
AC731_RS00865	SM00411	bacterial (prokaryotic) histone like domain
AC731_RS00875	SM00028	Tetratricopeptide repeats
AC731_RS00915	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AC731_RS00940	SM00873	B3/4 domain
AC731_RS00940	SM00874	tRNA synthetase B5 domain
AC731_RS00940	SM00896	Ferredoxin-fold anticodon binding domain
AC731_RS00945	SM00411	bacterial (prokaryotic) histone like domain
AC731_RS00950	SM00422	helix_turn_helix, mercury resistance
AC731_RS00970	SM00257	Lysin motif
AC731_RS00990	SM00460	Transglutaminase/protease-like homologues
AC731_RS01000	SM00382	ATPases associated with a variety of cellular activities
AC731_RS01010	SM01130	AC731_RS01010
AC731_RS01025	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AC731_RS01060	SM00382	ATPases associated with a variety of cellular activities
AC731_RS01060	SM00962	SRP54-type protein, GTPase domain
AC731_RS01085	SM00434	DNA Topoisomerase IV
AC731_RS01090	SM00387	Histidine kinase-like ATPases
AC731_RS01090	SM00433	TopoisomeraseII
AC731_RS01105	SM00858	AC731_RS01105
AC731_RS01150	SM00047	Lysozyme subfamily 2
AC731_RS01215	SM00382	ATPases associated with a variety of cellular activities
AC731_RS01235	SM00387	Histidine kinase-like ATPases
AC731_RS01235	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS01240	SM00382	ATPases associated with a variety of cellular activities
AC731_RS01240	SM00448	cheY-homologous receiver domain
AC731_RS01305	SM00028	Tetratricopeptide repeats
AC731_RS01315	SM00028	Tetratricopeptide repeats
AC731_RS01380	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS01380	SM00091	PAS domain
AC731_RS01380	SM00387	Histidine kinase-like ATPases
AC731_RS01380	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS01385	SM00421	helix_turn_helix, Lux Regulon
AC731_RS01385	SM00448	cheY-homologous receiver domain
AC731_RS01390	SM01091	Transporter associated domain
AC731_RS01400	SM01001	AIR carboxylase
AC731_RS01435	SM00857	Resolvase, N terminal domain
AC731_RS01500	SM00487	DEAD-like helicases superfamily
AC731_RS01530	SM00479	AC731_RS01530
AC731_RS01560	SM01236	AC731_RS01560
AC731_RS01575	SM00448	cheY-homologous receiver domain
AC731_RS01575	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS01580	SM00387	Histidine kinase-like ATPases
AC731_RS01580	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS01585	SM00450	Rhodanese Homology Domain
AC731_RS01620	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AC731_RS01625	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AC731_RS01645	SM00267	diguanylate cyclase
AC731_RS01655	SM00945	ProQ/FINO family
AC731_RS01670	SM01329	AC731_RS01670
AC731_RS01675	SM00870	AC731_RS01675
AC731_RS01735	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AC731_RS01745	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS01745	SM00091	PAS domain
AC731_RS01745	SM00267	diguanylate cyclase
AC731_RS01745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS01750	SM00382	ATPases associated with a variety of cellular activities
AC731_RS01750	SM00989	AC731_RS01750
AC731_RS01795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS01795	SM00895	AC731_RS01795
AC731_RS01815	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AC731_RS01880	SM00382	ATPases associated with a variety of cellular activities
AC731_RS01885	SM00420	helix_turn_helix, Deoxyribose operon repressor
AC731_RS01885	SM01134	AC731_RS01885
AC731_RS01915	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC731_RS01930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS01930	SM00895	AC731_RS01930
AC731_RS01975	SM00220	Serine/Threonine protein kinases, catalytic domain
AC731_RS02015	SM00073	Histidine Phosphotransfer domain
AC731_RS02015	SM00387	Histidine kinase-like ATPases
AC731_RS02015	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS02015	SM00448	cheY-homologous receiver domain
AC731_RS02020	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AC731_RS02025	SM00851	MGS-like domain
AC731_RS02025	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AC731_RS02035	SM01103	AC731_RS02035
AC731_RS02045	SM00382	ATPases associated with a variety of cellular activities
AC731_RS02075	SM00382	ATPases associated with a variety of cellular activities
AC731_RS02120	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AC731_RS02125	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AC731_RS02185	SM00938	Nitrogen regulatory protein P-II
AC731_RS02190	SM00463	Small MutS-related domain
AC731_RS02200	SM00100	Cyclic nucleotide-monophosphate binding domain
AC731_RS02200	SM00419	helix_turn_helix, cAMP Regulatory protein
AC731_RS02205	SM00843	AC731_RS02205
AC731_RS02215	SM00382	ATPases associated with a variety of cellular activities
AC731_RS02230	SM00062	Bacterial periplasmic substrate-binding proteins
AC731_RS02235	SM00271	DnaJ molecular chaperone homology domain
AC731_RS02265	SM00861	Transketolase, pyrimidine binding domain
AC731_RS02305	SM00904	Riboflavin kinase
AC731_RS02310	SM00646	AC731_RS02310
AC731_RS02335	SM00419	helix_turn_helix, cAMP Regulatory protein
AC731_RS02360	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS02385	SM00220	Serine/Threonine protein kinases, catalytic domain
AC731_RS02435	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AC731_RS02445	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC731_RS02450	SM00226	Low molecular weight phosphatase family
AC731_RS02475	SM00448	cheY-homologous receiver domain
AC731_RS02480	SM00448	cheY-homologous receiver domain
AC731_RS02490	SM00382	ATPases associated with a variety of cellular activities
AC731_RS02520	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS02520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS02535	SM00530	Helix-turn-helix XRE-family like proteins 
AC731_RS02540	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS02540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS02545	SM00382	ATPases associated with a variety of cellular activities
AC731_RS02560	SM00062	Bacterial periplasmic substrate-binding proteins
AC731_RS02575	SM00052	Putative diguanylate phosphodiesterase
AC731_RS02600	SM00382	ATPases associated with a variety of cellular activities
AC731_RS02630	SM00382	ATPases associated with a variety of cellular activities
AC731_RS02640	SM00062	Bacterial periplasmic substrate-binding proteins
AC731_RS02655	SM00382	ATPases associated with a variety of cellular activities
AC731_RS02655	SM00930	AC731_RS02655
AC731_RS02665	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC731_RS02710	SM00382	ATPases associated with a variety of cellular activities
AC731_RS02835	SM00382	ATPases associated with a variety of cellular activities
AC731_RS02845	SM00419	helix_turn_helix, cAMP Regulatory protein
AC731_RS02880	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AC731_RS02900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS02930	SM00267	diguanylate cyclase
AC731_RS02960	SM00382	ATPases associated with a variety of cellular activities
AC731_RS02975	SM00382	ATPases associated with a variety of cellular activities
AC731_RS02990	SM00481	DNA polymerase alpha chain like domain
AC731_RS03005	SM00382	ATPases associated with a variety of cellular activities
AC731_RS03020	SM00421	helix_turn_helix, Lux Regulon
AC731_RS03020	SM00448	cheY-homologous receiver domain
AC731_RS03025	SM00387	Histidine kinase-like ATPases
AC731_RS03045	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS03045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS03070	SM00937	AC731_RS03070
AC731_RS03090	SM00953	AC731_RS03090
AC731_RS03100	SM00357	Cold shock protein domain
AC731_RS03105	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS03110	SM00091	PAS domain
AC731_RS03110	SM00267	diguanylate cyclase
AC731_RS03110	SM01079	AC731_RS03110
AC731_RS03120	SM00382	ATPases associated with a variety of cellular activities
AC731_RS03130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS03130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS03140	SM00849	Metallo-beta-lactamase superfamily
AC731_RS03165	SM00479	AC731_RS03165
AC731_RS03230	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS03230	SM00091	PAS domain
AC731_RS03230	SM00267	diguanylate cyclase
AC731_RS03250	SM00062	Bacterial periplasmic substrate-binding proteins
AC731_RS03250	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC731_RS03265	SM00382	ATPases associated with a variety of cellular activities
AC731_RS03290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS03290	SM00866	AC731_RS03290
AC731_RS03325	SM00861	Transketolase, pyrimidine binding domain
AC731_RS03390	SM00382	ATPases associated with a variety of cellular activities
AC731_RS03405	SM00487	DEAD-like helicases superfamily
AC731_RS03405	SM00491	AC731_RS03405
AC731_RS03505	SM00382	ATPases associated with a variety of cellular activities
AC731_RS03535	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS03535	SM00091	PAS domain
AC731_RS03680	SM00857	Resolvase, N terminal domain
AC731_RS03700	SM00852	Probable molybdopterin binding domain
AC731_RS03750	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS03815	SM00382	ATPases associated with a variety of cellular activities
AC731_RS03830	SM00248	ankyrin repeats
AC731_RS03835	SM00487	DEAD-like helicases superfamily
AC731_RS03835	SM00490	helicase superfamily c-terminal domain
AC731_RS03900	SM00248	ankyrin repeats
AC731_RS04000	SM00387	Histidine kinase-like ATPases
AC731_RS04000	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS04005	SM00448	cheY-homologous receiver domain
AC731_RS04010	SM00479	AC731_RS04010
AC731_RS04020	SM00052	Putative diguanylate phosphodiesterase
AC731_RS04020	SM00267	diguanylate cyclase
AC731_RS04025	SM00091	PAS domain
AC731_RS04025	SM00387	Histidine kinase-like ATPases
AC731_RS04025	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS04035	SM00382	ATPases associated with a variety of cellular activities
AC731_RS04035	SM01086	C-terminal, D2-small domain, of ClpB protein
AC731_RS04040	SM00052	Putative diguanylate phosphodiesterase
AC731_RS04040	SM00267	diguanylate cyclase
AC731_RS04040	SM01079	AC731_RS04040
AC731_RS04095	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS04095	SM01240	AC731_RS04095
AC731_RS04160	SM00642	Alpha-amylase domain
AC731_RS04165	SM00642	Alpha-amylase domain
AC731_RS04200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS04230	SM00382	ATPases associated with a variety of cellular activities
AC731_RS04240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS04240	SM00895	AC731_RS04240
AC731_RS04285	SM00052	Putative diguanylate phosphodiesterase
AC731_RS04285	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS04285	SM00091	PAS domain
AC731_RS04285	SM00267	diguanylate cyclase
AC731_RS04285	SM01034	Sensors of blue-light using FAD
AC731_RS04410	SM00316	Ribosomal protein S1-like RNA-binding domain
AC731_RS04410	SM00732	Likely ribonuclease with RNase H fold.
AC731_RS04420	SM00881	CoA binding domain
AC731_RS04425	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS04425	SM00091	PAS domain
AC731_RS04425	SM00387	Histidine kinase-like ATPases
AC731_RS04425	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS04435	SM00450	Rhodanese Homology Domain
AC731_RS04450	SM00382	ATPases associated with a variety of cellular activities
AC731_RS04470	SM00487	DEAD-like helicases superfamily
AC731_RS04470	SM00490	helicase superfamily c-terminal domain
AC731_RS04470	SM00982	AC731_RS04470
AC731_RS04470	SM01058	CarD-like/TRCF domain
AC731_RS04545	SM00954	Region found in RelA / SpoT proteins
AC731_RS04565	SM00382	ATPases associated with a variety of cellular activities
AC731_RS04595	SM00893	Electron transfer flavoprotein domain
AC731_RS04600	SM00893	Electron transfer flavoprotein domain
AC731_RS04640	SM00849	Metallo-beta-lactamase superfamily
AC731_RS04645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS04645	SM00387	Histidine kinase-like ATPases
AC731_RS04645	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS04650	SM00448	cheY-homologous receiver domain
AC731_RS04650	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS04665	SM00986	Uracil DNA glycosylase superfamily
AC731_RS04665	SM00987	UreE urease accessory protein, C-terminal domain 
AC731_RS04680	SM00382	ATPases associated with a variety of cellular activities
AC731_RS04715	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS04720	SM00421	helix_turn_helix, Lux Regulon
AC731_RS04720	SM00448	cheY-homologous receiver domain
AC731_RS04725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS04745	SM00382	ATPases associated with a variety of cellular activities
AC731_RS04750	SM00382	ATPases associated with a variety of cellular activities
AC731_RS04775	SM00052	Putative diguanylate phosphodiesterase
AC731_RS04775	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS04775	SM00091	PAS domain
AC731_RS04775	SM00267	diguanylate cyclase
AC731_RS04775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS04780	SM00849	Metallo-beta-lactamase superfamily
AC731_RS04795	SM00849	Metallo-beta-lactamase superfamily
AC731_RS04810	SM00062	Bacterial periplasmic substrate-binding proteins
AC731_RS04820	SM00564	beta-propeller repeat
AC731_RS04860	SM00905	Dihydroneopterin aldolase
AC731_RS04945	SM00382	ATPases associated with a variety of cellular activities
AC731_RS04995	SM00382	ATPases associated with a variety of cellular activities
AC731_RS05015	SM00631	AC731_RS05015
AC731_RS05030	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AC731_RS05060	SM00935	Outer membrane protein (OmpH-like)
AC731_RS05070	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC731_RS05115	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC731_RS05130	SM00838	Elongation factor G C-terminus
AC731_RS05140	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC731_RS05140	SM00292	breast cancer carboxy-terminal domain
AC731_RS05140	SM00532	Ligase N family
AC731_RS05145	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AC731_RS05180	SM00448	cheY-homologous receiver domain
AC731_RS05200	SM00271	DnaJ molecular chaperone homology domain
AC731_RS05285	SM01040	BRO family, N-terminal domain
AC731_RS05410	SM00530	Helix-turn-helix XRE-family like proteins 
AC731_RS05515	SM00843	AC731_RS05515
AC731_RS05525	SM00496	Intron-encoded nuclease repeat 2
AC731_RS05530	SM00479	AC731_RS05530
AC731_RS05565	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AC731_RS05565	SM00534	ATPase domain of DNA mismatch repair MUTS family
AC731_RS05580	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS05585	SM00479	AC731_RS05585
AC731_RS05600	SM00849	Metallo-beta-lactamase superfamily
AC731_RS05605	SM00448	cheY-homologous receiver domain
AC731_RS05610	SM00257	Lysin motif
AC731_RS05615	SM00382	ATPases associated with a variety of cellular activities
AC731_RS05630	SM00829	Enoylreductase
AC731_RS05670	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC731_RS05715	SM00267	diguanylate cyclase
AC731_RS05735	SM00903	Flavin reductase like domain
AC731_RS05745	SM00347	helix_turn_helix multiple antibiotic resistance protein
AC731_RS05750	SM00052	Putative diguanylate phosphodiesterase
AC731_RS05750	SM00267	diguanylate cyclase
AC731_RS05875	SM00448	cheY-homologous receiver domain
AC731_RS05875	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS05880	SM00387	Histidine kinase-like ATPases
AC731_RS05880	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS05905	SM00831	Cation transporter/ATPase, N-terminus
AC731_RS05920	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AC731_RS05945	SM00014	Acid phosphatase homologues
AC731_RS05960	SM00382	ATPases associated with a variety of cellular activities
AC731_RS06015	SM00493	AC731_RS06015
AC731_RS06055	SM00411	bacterial (prokaryotic) histone like domain
AC731_RS06060	SM00382	ATPases associated with a variety of cellular activities
AC731_RS06060	SM00464	Found in ATP-dependent protease La (LON)
AC731_RS06065	SM00382	ATPases associated with a variety of cellular activities
AC731_RS06065	SM00994	ClpX C4-type zinc finger
AC731_RS06065	SM01086	C-terminal, D2-small domain, of ClpB protein
AC731_RS06080	SM00763	PrkA AAA domain
AC731_RS06160	SM00670	Large family of predicted nucleotide-binding domains
AC731_RS06165	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS06170	SM00479	AC731_RS06170
AC731_RS06190	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS06190	SM00091	PAS domain
AC731_RS06190	SM00267	diguanylate cyclase
AC731_RS06200	SM00382	ATPases associated with a variety of cellular activities
AC731_RS06225	SM00646	AC731_RS06225
AC731_RS06240	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AC731_RS06245	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS06245	SM00091	PAS domain
AC731_RS06245	SM00267	diguanylate cyclase
AC731_RS06275	SM00327	von Willebrand factor (vWF) type A domain
AC731_RS06280	SM00100	Cyclic nucleotide-monophosphate binding domain
AC731_RS06280	SM00419	helix_turn_helix, cAMP Regulatory protein
AC731_RS06285	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS06285	SM00091	PAS domain
AC731_RS06285	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS06290	SM00052	Putative diguanylate phosphodiesterase
AC731_RS06305	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS06315	SM00344	helix_turn_helix ASNC type
AC731_RS06345	SM00887	Ethylbenzene dehydrogenase
AC731_RS06365	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS06385	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AC731_RS06635	SM00479	AC731_RS06635
AC731_RS06695	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC731_RS06695	SM00465	GIY-YIG type nucleases (URI domain)
AC731_RS06725	SM00358	Double-stranded RNA binding motif
AC731_RS06725	SM00535	Ribonuclease III family
AC731_RS06750	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC731_RS06785	SM00825	Beta-ketoacyl synthase
AC731_RS06795	SM00822	AC731_RS06795
AC731_RS06800	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AC731_RS06840	SM00363	S4 RNA-binding domain
AC731_RS06845	SM00316	Ribosomal protein S1-like RNA-binding domain
AC731_RS06850	SM00226	Low molecular weight phosphatase family
AC731_RS06855	SM00487	DEAD-like helicases superfamily
AC731_RS06855	SM00490	helicase superfamily c-terminal domain
AC731_RS06880	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS06880	SM00091	PAS domain
AC731_RS06880	SM00387	Histidine kinase-like ATPases
AC731_RS06880	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS06880	SM00448	cheY-homologous receiver domain
AC731_RS06885	SM00448	cheY-homologous receiver domain
AC731_RS06885	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC731_RS06910	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS06915	SM00867	YceI-like domain 
AC731_RS06955	SM00411	bacterial (prokaryotic) histone like domain
AC731_RS07015	SM00346	helix_turn_helix isocitrate lyase regulation
AC731_RS07260	SM01007	Class II Aldolase and Adducin N-terminal domain
AC731_RS07310	SM00382	ATPases associated with a variety of cellular activities
AC731_RS07330	SM00316	Ribosomal protein S1-like RNA-binding domain
AC731_RS07330	SM00322	K homology RNA-binding domain
AC731_RS07335	SM01387	AC731_RS07335
AC731_RS07355	SM00316	Ribosomal protein S1-like RNA-binding domain
AC731_RS07365	SM00363	S4 RNA-binding domain
AC731_RS07390	SM00481	DNA polymerase alpha chain like domain
AC731_RS07410	SM00357	Cold shock protein domain
AC731_RS07415	SM00487	DEAD-like helicases superfamily
AC731_RS07415	SM00490	helicase superfamily c-terminal domain
AC731_RS07425	SM00052	Putative diguanylate phosphodiesterase
AC731_RS07425	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS07425	SM00091	PAS domain
AC731_RS07425	SM00267	diguanylate cyclase
AC731_RS07435	SM01322	AC731_RS07435
AC731_RS07510	SM01192	AC731_RS07510
AC731_RS07510	SM01193	AC731_RS07510
AC731_RS07560	SM00052	Putative diguanylate phosphodiesterase
AC731_RS07570	SM01211	AC731_RS07570
AC731_RS07580	SM00382	ATPases associated with a variety of cellular activities
AC731_RS07705	SM00073	Histidine Phosphotransfer domain
AC731_RS07705	SM00260	Two component signalling adaptor domain
AC731_RS07705	SM00387	Histidine kinase-like ATPases
AC731_RS07705	SM01231	AC731_RS07705
AC731_RS07715	SM00448	cheY-homologous receiver domain
AC731_RS07720	SM00260	Two component signalling adaptor domain
AC731_RS07720	SM00448	cheY-homologous receiver domain
AC731_RS07725	SM00260	Two component signalling adaptor domain
AC731_RS07725	SM00448	cheY-homologous receiver domain
AC731_RS07750	SM00267	diguanylate cyclase
AC731_RS07750	SM00448	cheY-homologous receiver domain
AC731_RS07780	SM00900	AC731_RS07780
AC731_RS07790	SM00478	endonuclease III
AC731_RS07790	SM00525	AC731_RS07790
AC731_RS07805	SM00448	cheY-homologous receiver domain
AC731_RS07805	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS07810	SM00387	Histidine kinase-like ATPases
AC731_RS07855	SM00448	cheY-homologous receiver domain
AC731_RS07855	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS07860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS07860	SM00387	Histidine kinase-like ATPases
AC731_RS07860	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS07870	SM00478	endonuclease III
AC731_RS07870	SM01009	AlkA N-terminal domain
AC731_RS07890	SM00382	ATPases associated with a variety of cellular activities
AC731_RS07920	SM00267	diguanylate cyclase
AC731_RS07920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS07930	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC731_RS07935	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AC731_RS07990	SM00448	cheY-homologous receiver domain
AC731_RS07995	SM00387	Histidine kinase-like ATPases
AC731_RS07995	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS08015	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AC731_RS08015	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AC731_RS08035	SM01049	AC731_RS08035
AC731_RS08040	SM00421	helix_turn_helix, Lux Regulon
AC731_RS08045	SM00893	Electron transfer flavoprotein domain
AC731_RS08050	SM00893	Electron transfer flavoprotein domain
AC731_RS08065	SM00822	AC731_RS08065
AC731_RS08090	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS08100	SM01007	Class II Aldolase and Adducin N-terminal domain
AC731_RS08160	SM00346	helix_turn_helix isocitrate lyase regulation
AC731_RS08180	SM00849	Metallo-beta-lactamase superfamily
AC731_RS08230	SM00822	AC731_RS08230
AC731_RS08270	SM00327	von Willebrand factor (vWF) type A domain
AC731_RS08275	SM00028	Tetratricopeptide repeats
AC731_RS08370	SM01007	Class II Aldolase and Adducin N-terminal domain
AC731_RS08390	SM00421	helix_turn_helix, Lux Regulon
AC731_RS08390	SM00448	cheY-homologous receiver domain
AC731_RS08395	SM00387	Histidine kinase-like ATPases
AC731_RS08395	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS08460	SM00822	AC731_RS08460
AC731_RS08470	SM00822	AC731_RS08470
AC731_RS08505	SM00882	Coenzyme A transferase
AC731_RS08510	SM00882	Coenzyme A transferase
AC731_RS08525	SM00091	PAS domain
AC731_RS08525	SM00421	helix_turn_helix, Lux Regulon
AC731_RS08560	SM00564	beta-propeller repeat
AC731_RS08635	SM00849	Metallo-beta-lactamase superfamily
AC731_RS08665	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS08710	SM00421	helix_turn_helix, Lux Regulon
AC731_RS08800	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS08825	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS08825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS08840	SM00822	AC731_RS08840
AC731_RS08860	SM00869	Autotransporter beta-domain
AC731_RS08885	SM00903	Flavin reductase like domain
AC731_RS08890	SM00822	AC731_RS08890
AC731_RS08900	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AC731_RS08915	SM00530	Helix-turn-helix XRE-family like proteins 
AC731_RS08955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS08960	SM00052	Putative diguanylate phosphodiesterase
AC731_RS08960	SM00091	PAS domain
AC731_RS08960	SM00267	diguanylate cyclase
AC731_RS08960	SM00448	cheY-homologous receiver domain
AC731_RS08965	SM00091	PAS domain
AC731_RS08985	SM00421	helix_turn_helix, Lux Regulon
AC731_RS09040	SM00857	Resolvase, N terminal domain
AC731_RS09130	SM00853	MutL C terminal dimerisation domain
AC731_RS09130	SM01340	AC731_RS09130
AC731_RS09140	SM00267	diguanylate cyclase
AC731_RS09140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS09260	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS09280	SM00831	Cation transporter/ATPase, N-terminus
AC731_RS09310	SM00917	LeuA allosteric (dimerisation) domain
AC731_RS09510	SM00507	HNH nucleases
AC731_RS09525	SM00062	Bacterial periplasmic substrate-binding proteins
AC731_RS09525	SM00387	Histidine kinase-like ATPases
AC731_RS09525	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS09530	SM00448	cheY-homologous receiver domain
AC731_RS09530	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS09535	SM00869	Autotransporter beta-domain
AC731_RS09545	SM00382	ATPases associated with a variety of cellular activities
AC731_RS09575	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
AC731_RS09585	SM00382	ATPases associated with a variety of cellular activities
AC731_RS09605	SM00062	Bacterial periplasmic substrate-binding proteins
AC731_RS09655	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS09655	SM00876	Biotin and Thiamin Synthesis associated domain
AC731_RS09670	SM00564	beta-propeller repeat
AC731_RS09675	SM01049	AC731_RS09675
AC731_RS09685	SM00849	Metallo-beta-lactamase superfamily
AC731_RS09745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS09745	SM00387	Histidine kinase-like ATPases
AC731_RS09745	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS09745	SM00448	cheY-homologous receiver domain
AC731_RS09750	SM00448	cheY-homologous receiver domain
AC731_RS09750	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS09780	SM00852	Probable molybdopterin binding domain
AC731_RS09810	SM00855	Phosphoglycerate mutase family
AC731_RS09855	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC731_RS09855	SM00245	tail specific protease
AC731_RS09865	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC731_RS09870	SM00450	Rhodanese Homology Domain
AC731_RS09920	SM01004	Delta-aminolevulinic acid dehydratase
AC731_RS09950	SM00852	Probable molybdopterin binding domain
AC731_RS09970	SM00091	PAS domain
AC731_RS09970	SM00267	diguanylate cyclase
AC731_RS10000	SM00861	Transketolase, pyrimidine binding domain
AC731_RS10005	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AC731_RS10040	SM00255	Toll - interleukin 1 - resistance
AC731_RS10055	SM00961	Ribulose bisphosphate carboxylase, small chain
AC731_RS10060	SM00382	ATPases associated with a variety of cellular activities
AC731_RS10075	SM00861	Transketolase, pyrimidine binding domain
AC731_RS10130	SM00419	helix_turn_helix, cAMP Regulatory protein
AC731_RS10140	SM00650	Ribosomal RNA adenine dimethylases
AC731_RS10170	SM01011	Aminopeptidase P, N-terminal domain
AC731_RS10190	SM00382	ATPases associated with a variety of cellular activities
AC731_RS10190	SM00930	AC731_RS10190
AC731_RS10205	SM00798	AICARFT/IMPCHase bienzyme
AC731_RS10205	SM00851	MGS-like domain
AC731_RS10210	SM01209	AC731_RS10210
AC731_RS10210	SM01210	AC731_RS10210
AC731_RS10255	SM00448	cheY-homologous receiver domain
AC731_RS10255	SM00850	LytTr DNA-binding domain
AC731_RS10270	SM00100	Cyclic nucleotide-monophosphate binding domain
AC731_RS10270	SM00220	Serine/Threonine protein kinases, catalytic domain
AC731_RS10310	SM00937	AC731_RS10310
AC731_RS10355	SM00448	cheY-homologous receiver domain
AC731_RS10355	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS10360	SM00387	Histidine kinase-like ATPases
AC731_RS10360	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS10375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS10375	SM00387	Histidine kinase-like ATPases
AC731_RS10375	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS10380	SM00448	cheY-homologous receiver domain
AC731_RS10380	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS10390	SM00883	Chaperonin 10 Kd subunit
AC731_RS10420	SM00267	diguanylate cyclase
AC731_RS10420	SM00448	cheY-homologous receiver domain
AC731_RS10425	SM00829	Enoylreductase
AC731_RS10445	SM00382	ATPases associated with a variety of cellular activities
AC731_RS10465	SM00671	Sel1-like repeats.
AC731_RS10470	SM00984	UDP binding domain
AC731_RS10475	SM00028	Tetratricopeptide repeats
AC731_RS10480	SM00382	ATPases associated with a variety of cellular activities
AC731_RS10480	SM00448	cheY-homologous receiver domain
AC731_RS10485	SM00387	Histidine kinase-like ATPases
AC731_RS10580	SM00481	DNA polymerase alpha chain like domain
AC731_RS10585	SM00829	Enoylreductase
AC731_RS10595	SM00919	Malic enzyme, NAD binding domain
AC731_RS10595	SM01274	AC731_RS10595
AC731_RS10655	SM00528	Domain in histone-like proteins of HNS family
AC731_RS10660	SM00905	Dihydroneopterin aldolase
AC731_RS10665	SM01207	AC731_RS10665
AC731_RS10695	SM00400	zinc finger
AC731_RS10695	SM00493	AC731_RS10695
AC731_RS10695	SM00766	DNA primase DnaG DnaB-binding
AC731_RS10740	SM00858	AC731_RS10740
AC731_RS10750	SM00240	Forkhead associated domain
AC731_RS10810	SM00829	Enoylreductase
AC731_RS10830	SM00852	Probable molybdopterin binding domain
AC731_RS10840	SM00382	ATPases associated with a variety of cellular activities
AC731_RS10840	SM00962	SRP54-type protein, GTPase domain
AC731_RS10840	SM00963	SRP54-type protein, helical bundle domain
AC731_RS10865	SM00834	Putative regulatory protein
AC731_RS10880	SM00448	cheY-homologous receiver domain
AC731_RS10920	SM00450	Rhodanese Homology Domain
AC731_RS10930	SM01057	Eukaryotic-type carbonic anhydrase
AC731_RS10945	SM00829	Enoylreductase
AC731_RS10985	SM00382	ATPases associated with a variety of cellular activities
AC731_RS11070	SM00346	helix_turn_helix isocitrate lyase regulation
AC731_RS11085	SM00919	Malic enzyme, NAD binding domain
AC731_RS11085	SM01274	AC731_RS11085
AC731_RS11105	SM00644	AC731_RS11105
AC731_RS11155	SM00953	AC731_RS11155
AC731_RS11180	SM00984	UDP binding domain
AC731_RS11310	SM00382	ATPases associated with a variety of cellular activities
AC731_RS11335	SM00849	Metallo-beta-lactamase superfamily
AC731_RS11335	SM01027	Beta-Casp domain
AC731_RS11340	SM00382	ATPases associated with a variety of cellular activities
AC731_RS11340	SM00448	cheY-homologous receiver domain
AC731_RS11345	SM00387	Histidine kinase-like ATPases
AC731_RS11345	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS11365	SM01007	Class II Aldolase and Adducin N-terminal domain
AC731_RS11440	SM00849	Metallo-beta-lactamase superfamily
AC731_RS11455	SM00382	ATPases associated with a variety of cellular activities
AC731_RS11470	SM00662	RNA polymerases D
AC731_RS11475	SM00363	S4 RNA-binding domain
AC731_RS11475	SM01390	AC731_RS11475
AC731_RS11490	SM00316	Ribosomal protein S1-like RNA-binding domain
AC731_RS11540	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AC731_RS11545	SM01374	AC731_RS11545
AC731_RS11565	SM00322	K homology RNA-binding domain
AC731_RS11580	SM01382	AC731_RS11580
AC731_RS11580	SM01383	AC731_RS11580
AC731_RS11600	SM01403	AC731_RS11600
AC731_RS11610	SM00838	Elongation factor G C-terminus
AC731_RS11610	SM00889	Elongation factor G, domain IV
AC731_RS11625	SM00663	RNA polymerase I subunit A N-terminus
AC731_RS11650	SM00649	Ribosomal protein L11/L12
AC731_RS11655	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AC731_RS11655	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AC731_RS11705	SM00421	helix_turn_helix, Lux Regulon
AC731_RS11705	SM00448	cheY-homologous receiver domain
AC731_RS11715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS11715	SM00387	Histidine kinase-like ATPases
AC731_RS11715	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS11715	SM00448	cheY-homologous receiver domain
AC731_RS11735	SM00382	ATPases associated with a variety of cellular activities
AC731_RS11755	SM00382	ATPases associated with a variety of cellular activities
AC731_RS11780	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS11780	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS11780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS11790	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS11795	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS11795	SM00091	PAS domain
AC731_RS11795	SM00387	Histidine kinase-like ATPases
AC731_RS11795	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS11795	SM00448	cheY-homologous receiver domain
AC731_RS11800	SM00448	cheY-homologous receiver domain
AC731_RS11800	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS11850	SM00878	Biotin carboxylase C-terminal domain
AC731_RS11870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS11870	SM00895	AC731_RS11870
AC731_RS11875	SM01091	Transporter associated domain
AC731_RS11905	SM00052	Putative diguanylate phosphodiesterase
AC731_RS11905	SM00267	diguanylate cyclase
AC731_RS11905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS11910	SM00382	ATPases associated with a variety of cellular activities
AC731_RS11920	SM00421	helix_turn_helix, Lux Regulon
AC731_RS11955	SM00382	ATPases associated with a variety of cellular activities
AC731_RS11975	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12030	SM00052	Putative diguanylate phosphodiesterase
AC731_RS12030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS12030	SM00091	PAS domain
AC731_RS12030	SM00267	diguanylate cyclase
AC731_RS12030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS12085	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12110	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AC731_RS12120	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12145	SM00363	S4 RNA-binding domain
AC731_RS12145	SM01390	AC731_RS12145
AC731_RS12165	SM00448	cheY-homologous receiver domain
AC731_RS12165	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS12170	SM00387	Histidine kinase-like ATPases
AC731_RS12170	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS12170	SM00448	cheY-homologous receiver domain
AC731_RS12210	SM00240	Forkhead associated domain
AC731_RS12215	SM01400	AC731_RS12215
AC731_RS12220	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AC731_RS12225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS12230	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS12255	SM00091	PAS domain
AC731_RS12255	SM00267	diguanylate cyclase
AC731_RS12260	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12280	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12285	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12285	SM00962	SRP54-type protein, GTPase domain
AC731_RS12285	SM00963	SRP54-type protein, helical bundle domain
AC731_RS12320	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AC731_RS12320	SM01232	AC731_RS12320
AC731_RS12325	SM00028	Tetratricopeptide repeats
AC731_RS12345	SM01400	AC731_RS12345
AC731_RS12385	SM00448	cheY-homologous receiver domain
AC731_RS12390	SM00387	Histidine kinase-like ATPases
AC731_RS12390	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS12400	SM00900	AC731_RS12400
AC731_RS12410	SM00710	Parallel beta-helix repeats
AC731_RS12410	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
AC731_RS12415	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12455	SM00881	CoA binding domain
AC731_RS12460	SM00155	Phospholipase D. Active site motifs.
AC731_RS12475	SM00450	Rhodanese Homology Domain
AC731_RS12485	SM01230	AC731_RS12485
AC731_RS12495	SM00387	Histidine kinase-like ATPases
AC731_RS12495	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS12500	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12500	SM00448	cheY-homologous receiver domain
AC731_RS12545	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12555	SM00925	MltA specific insert domain
AC731_RS12595	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12625	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12625	SM00487	DEAD-like helicases superfamily
AC731_RS12625	SM00490	helicase superfamily c-terminal domain
AC731_RS12625	SM00847	Helicase associated domain (HA2)  Add an annotation
AC731_RS12660	SM00955	AC731_RS12660
AC731_RS12680	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS12680	SM00924	MgtE intracellular N domain
AC731_RS12705	SM00448	cheY-homologous receiver domain
AC731_RS12710	SM00448	cheY-homologous receiver domain
AC731_RS12720	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS12725	SM00073	Histidine Phosphotransfer domain
AC731_RS12725	SM00260	Two component signalling adaptor domain
AC731_RS12725	SM00387	Histidine kinase-like ATPases
AC731_RS12725	SM00448	cheY-homologous receiver domain
AC731_RS12725	SM01231	AC731_RS12725
AC731_RS12745	SM00732	Likely ribonuclease with RNase H fold.
AC731_RS12780	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12790	SM00981	AC731_RS12790
AC731_RS12810	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC731_RS12905	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS12920	SM00387	Histidine kinase-like ATPases
AC731_RS12920	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS12925	SM00382	ATPases associated with a variety of cellular activities
AC731_RS12925	SM00448	cheY-homologous receiver domain
AC731_RS12950	SM00387	Histidine kinase-like ATPases
AC731_RS12955	SM00052	Putative diguanylate phosphodiesterase
AC731_RS12955	SM00091	PAS domain
AC731_RS12955	SM00267	diguanylate cyclase
AC731_RS12955	SM00448	cheY-homologous receiver domain
AC731_RS12990	SM00849	Metallo-beta-lactamase superfamily
AC731_RS13000	SM00487	DEAD-like helicases superfamily
AC731_RS13000	SM00490	helicase superfamily c-terminal domain
AC731_RS13010	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS13015	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS13055	SM00382	ATPases associated with a variety of cellular activities
AC731_RS13085	SM00855	Phosphoglycerate mutase family
AC731_RS13095	SM00984	UDP binding domain
AC731_RS13150	SM00382	ATPases associated with a variety of cellular activities
AC731_RS13240	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AC731_RS13240	SM00474	3'-5' exonuclease
AC731_RS13240	SM00475	5'-3' exonuclease
AC731_RS13240	SM00482	DNA polymerase A domain
AC731_RS13255	SM00986	Uracil DNA glycosylase superfamily
AC731_RS13255	SM00987	UreE urease accessory protein, C-terminal domain 
AC731_RS13295	SM00316	Ribosomal protein S1-like RNA-binding domain
AC731_RS13335	SM00382	ATPases associated with a variety of cellular activities
AC731_RS13340	SM00382	ATPases associated with a variety of cellular activities
AC731_RS13360	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AC731_RS13365	SM00382	ATPases associated with a variety of cellular activities
AC731_RS13415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS13420	SM00996	S-adenosyl-L-homocysteine hydrolase
AC731_RS13420	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AC731_RS13425	SM00363	S4 RNA-binding domain
AC731_RS13435	SM00267	diguanylate cyclase
AC731_RS13435	SM00448	cheY-homologous receiver domain
AC731_RS13515	SM00460	Transglutaminase/protease-like homologues
AC731_RS13525	SM00460	Transglutaminase/protease-like homologues
AC731_RS13625	SM00062	Bacterial periplasmic substrate-binding proteins
AC731_RS13625	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AC731_RS13635	SM00382	ATPases associated with a variety of cellular activities
AC731_RS13650	SM00487	DEAD-like helicases superfamily
AC731_RS13650	SM00490	helicase superfamily c-terminal domain
AC731_RS13655	SM00411	bacterial (prokaryotic) histone like domain
AC731_RS13665	SM00903	Flavin reductase like domain
AC731_RS13670	SM00478	endonuclease III
AC731_RS13675	SM00464	Found in ATP-dependent protease La (LON)
AC731_RS13710	SM00849	Metallo-beta-lactamase superfamily
AC731_RS13715	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AC731_RS13725	SM00257	Lysin motif
AC731_RS13770	SM00052	Putative diguanylate phosphodiesterase
AC731_RS13770	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS13770	SM00091	PAS domain
AC731_RS13770	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS13770	SM00267	diguanylate cyclase
AC731_RS13780	SM00465	GIY-YIG type nucleases (URI domain)
AC731_RS13780	SM00479	AC731_RS13780
AC731_RS13785	SM00052	Putative diguanylate phosphodiesterase
AC731_RS13785	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS13785	SM00091	PAS domain
AC731_RS13785	SM00267	diguanylate cyclase
AC731_RS13870	SM00138	Methyltransferase, chemotaxis proteins 
AC731_RS13890	SM00382	ATPases associated with a variety of cellular activities
AC731_RS13905	SM00829	Enoylreductase
AC731_RS13920	SM00357	Cold shock protein domain
AC731_RS13935	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS13955	SM00936	Penicillin-binding protein 5, C-terminal domain 
AC731_RS14005	SM00845	GatB domain
AC731_RS14030	SM00387	Histidine kinase-like ATPases
AC731_RS14030	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS14035	SM00448	cheY-homologous receiver domain
AC731_RS14035	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS14050	SM00978	AC731_RS14050
AC731_RS14065	SM00382	ATPases associated with a variety of cellular activities
AC731_RS14115	SM00470	ParB-like nuclease domain
AC731_RS14130	SM01228	AC731_RS14130
AC731_RS14140	SM00881	CoA binding domain
AC731_RS14165	SM00344	helix_turn_helix ASNC type
AC731_RS14170	SM00917	LeuA allosteric (dimerisation) domain
AC731_RS14175	SM00062	Bacterial periplasmic substrate-binding proteins
AC731_RS14180	SM00267	diguanylate cyclase
AC731_RS14190	SM00052	Putative diguanylate phosphodiesterase
AC731_RS14190	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS14190	SM00091	PAS domain
AC731_RS14190	SM00267	diguanylate cyclase
AC731_RS14190	SM00448	cheY-homologous receiver domain
AC731_RS14195	SM00382	ATPases associated with a variety of cellular activities
AC731_RS14205	SM00769	Water Stress and Hypersensitive response
AC731_RS14215	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS14225	SM01091	Transporter associated domain
AC731_RS14320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS14320	SM00895	AC731_RS14320
AC731_RS14325	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AC731_RS14365	SM00858	AC731_RS14365
AC731_RS14400	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS14410	SM00244	prohibitin homologues
AC731_RS14445	SM00841	Elongation factor P, C-terminal
AC731_RS14445	SM01185	AC731_RS14445
AC731_RS14455	SM00382	ATPases associated with a variety of cellular activities
AC731_RS14465	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS14525	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS14525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS14530	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC731_RS14545	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AC731_RS14545	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AC731_RS14545	SM00493	AC731_RS14545
AC731_RS14635	SM00267	diguanylate cyclase
AC731_RS14665	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS14685	SM00267	diguanylate cyclase
AC731_RS14685	SM00448	cheY-homologous receiver domain
AC731_RS14690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS14690	SM00895	AC731_RS14690
AC731_RS14720	SM00382	ATPases associated with a variety of cellular activities
AC731_RS14725	SM00387	Histidine kinase-like ATPases
AC731_RS14725	SM00433	TopoisomeraseII
AC731_RS14730	SM00480	DNA polymerase III beta subunit
AC731_RS14735	SM00382	ATPases associated with a variety of cellular activities
AC731_RS14735	SM00760	Bacterial dnaA protein helix-turn-helix domain
AC731_RS14745	SM01234	AC731_RS14745
AC731_RS14795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS14795	SM00387	Histidine kinase-like ATPases
AC731_RS14795	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS14800	SM00448	cheY-homologous receiver domain
AC731_RS14820	SM00487	DEAD-like helicases superfamily
AC731_RS14820	SM00490	helicase superfamily c-terminal domain
AC731_RS14825	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC731_RS14835	SM00947	Carbonic anhydrase
AC731_RS14900	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS14915	SM00331	Sigma factor PP2C-like phosphatases
AC731_RS14915	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AC731_RS14920	SM00220	Serine/Threonine protein kinases, catalytic domain
AC731_RS14930	SM00072	Guanylate kinase homologues.
AC731_RS14935	SM01409	AC731_RS14935
AC731_RS14940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC731_RS14940	SM00954	Region found in RelA / SpoT proteins
AC731_RS14945	SM00267	diguanylate cyclase
AC731_RS14945	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS14955	SM00479	AC731_RS14955
AC731_RS14960	SM00100	Cyclic nucleotide-monophosphate binding domain
AC731_RS14960	SM00419	helix_turn_helix, cAMP Regulatory protein
AC731_RS14965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS14965	SM00387	Histidine kinase-like ATPases
AC731_RS14970	SM00421	helix_turn_helix, Lux Regulon
AC731_RS14970	SM00448	cheY-homologous receiver domain
AC731_RS14985	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC731_RS15010	SM00382	ATPases associated with a variety of cellular activities
AC731_RS15050	SM00028	Tetratricopeptide repeats
AC731_RS15055	SM01005	Alanine racemase, C-terminal domain
AC731_RS15065	SM00344	helix_turn_helix ASNC type
AC731_RS15070	SM00507	HNH nucleases
AC731_RS15100	SM00100	Cyclic nucleotide-monophosphate binding domain
AC731_RS15100	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS15105	SM00479	AC731_RS15105
AC731_RS15120	SM00530	Helix-turn-helix XRE-family like proteins 
AC731_RS15130	SM00028	Tetratricopeptide repeats
AC731_RS15160	SM00530	Helix-turn-helix XRE-family like proteins 
AC731_RS15190	SM00318	Staphylococcal nuclease homologues
AC731_RS15200	SM00528	Domain in histone-like proteins of HNS family
AC731_RS15240	SM00831	Cation transporter/ATPase, N-terminus
AC731_RS15260	SM00422	helix_turn_helix, mercury resistance
AC731_RS15290	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AC731_RS15325	SM00448	cheY-homologous receiver domain
AC731_RS15325	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS15330	SM00387	Histidine kinase-like ATPases
AC731_RS15330	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS15350	SM00382	ATPases associated with a variety of cellular activities
AC731_RS15355	SM00267	diguanylate cyclase
AC731_RS15360	SM00421	helix_turn_helix, Lux Regulon
AC731_RS15360	SM00448	cheY-homologous receiver domain
AC731_RS15365	SM00448	cheY-homologous receiver domain
AC731_RS15370	SM00387	Histidine kinase-like ATPases
AC731_RS15375	SM00749	bacterial OsmY and nodulation domain
AC731_RS15395	SM00829	Enoylreductase
AC731_RS15460	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AC731_RS15520	SM00267	diguanylate cyclase
AC731_RS15520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS15545	SM00052	Putative diguanylate phosphodiesterase
AC731_RS15545	SM00091	PAS domain
AC731_RS15545	SM00267	diguanylate cyclase
AC731_RS15560	SM00382	ATPases associated with a variety of cellular activities
AC731_RS15565	SM00382	ATPases associated with a variety of cellular activities
AC731_RS15580	SM00267	diguanylate cyclase
AC731_RS15585	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS15600	SM00382	ATPases associated with a variety of cellular activities
AC731_RS15625	SM00563	Phosphate acyltransferases
AC731_RS15635	SM00448	cheY-homologous receiver domain
AC731_RS15635	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC731_RS15640	SM00387	Histidine kinase-like ATPases
AC731_RS15640	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS15640	SM00448	cheY-homologous receiver domain
AC731_RS15650	SM00052	Putative diguanylate phosphodiesterase
AC731_RS15650	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS15650	SM00091	PAS domain
AC731_RS15650	SM00267	diguanylate cyclase
AC731_RS15665	SM00450	Rhodanese Homology Domain
AC731_RS15685	SM00382	ATPases associated with a variety of cellular activities
AC731_RS15690	SM00382	ATPases associated with a variety of cellular activities
AC731_RS15715	SM00344	helix_turn_helix ASNC type
AC731_RS15765	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AC731_RS15765	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AC731_RS15770	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AC731_RS15855	SM00382	ATPases associated with a variety of cellular activities
AC731_RS15860	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC731_RS15885	SM00938	Nitrogen regulatory protein P-II
AC731_RS15900	SM00382	ATPases associated with a variety of cellular activities
AC731_RS15905	SM00450	Rhodanese Homology Domain
AC731_RS15910	SM00382	ATPases associated with a variety of cellular activities
AC731_RS15915	SM00382	ATPases associated with a variety of cellular activities
AC731_RS15950	SM01018	B12 binding domain
AC731_RS15975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS15975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS15980	SM01400	AC731_RS15980
AC731_RS16035	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS16045	SM00382	ATPases associated with a variety of cellular activities
AC731_RS16080	SM00867	YceI-like domain 
AC731_RS16085	SM00867	YceI-like domain 
AC731_RS16110	SM00346	helix_turn_helix isocitrate lyase regulation
AC731_RS16125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS16125	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS16140	SM00346	helix_turn_helix isocitrate lyase regulation
AC731_RS16180	SM00382	ATPases associated with a variety of cellular activities
AC731_RS16210	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS16240	SM01049	AC731_RS16240
AC731_RS16265	SM00450	Rhodanese Homology Domain
AC731_RS16290	SM00327	von Willebrand factor (vWF) type A domain
AC731_RS16315	SM00834	Putative regulatory protein
AC731_RS16325	SM00382	ATPases associated with a variety of cellular activities
AC731_RS16350	SM00387	Histidine kinase-like ATPases
AC731_RS16350	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS16350	SM00448	cheY-homologous receiver domain
AC731_RS16355	SM00421	helix_turn_helix, Lux Regulon
AC731_RS16355	SM00448	cheY-homologous receiver domain
AC731_RS16395	SM00988	UreE urease accessory protein, N-terminal domain
AC731_RS16415	SM00091	PAS domain
AC731_RS16415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS16415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS16420	SM00052	Putative diguanylate phosphodiesterase
AC731_RS16420	SM00091	PAS domain
AC731_RS16420	SM00267	diguanylate cyclase
AC731_RS16430	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS16555	SM00240	Forkhead associated domain
AC731_RS16585	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC731_RS16635	SM00382	ATPases associated with a variety of cellular activities
AC731_RS16645	SM00382	ATPases associated with a variety of cellular activities
AC731_RS16695	SM00836	DALR anticodon binding domain
AC731_RS16695	SM01016	Arginyl tRNA synthetase N terminal dom
AC731_RS16745	SM00849	Metallo-beta-lactamase superfamily
AC731_RS16750	SM00422	helix_turn_helix, mercury resistance
AC731_RS16760	SM00947	Carbonic anhydrase
AC731_RS16845	SM00822	AC731_RS16845
AC731_RS16850	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS16855	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS16855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS16945	SM00346	helix_turn_helix isocitrate lyase regulation
AC731_RS16965	SM00346	helix_turn_helix isocitrate lyase regulation
AC731_RS16990	SM00822	AC731_RS16990
AC731_RS17020	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS17035	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AC731_RS17050	SM00487	DEAD-like helicases superfamily
AC731_RS17050	SM00490	helicase superfamily c-terminal domain
AC731_RS17090	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS17125	SM00878	Biotin carboxylase C-terminal domain
AC731_RS17145	SM00849	Metallo-beta-lactamase superfamily
AC731_RS17150	SM00382	ATPases associated with a variety of cellular activities
AC731_RS17165	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS17305	SM00382	ATPases associated with a variety of cellular activities
AC731_RS17305	SM01086	C-terminal, D2-small domain, of ClpB protein
AC731_RS17320	SM00244	prohibitin homologues
AC731_RS17330	SM00363	S4 RNA-binding domain
AC731_RS17335	SM00028	Tetratricopeptide repeats
AC731_RS17375	SM00870	AC731_RS17375
AC731_RS17385	SM00382	ATPases associated with a variety of cellular activities
AC731_RS17440	SM00900	AC731_RS17440
AC731_RS17490	SM00487	DEAD-like helicases superfamily
AC731_RS17490	SM00490	helicase superfamily c-terminal domain
AC731_RS17505	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AC731_RS17535	SM01219	AC731_RS17535
AC731_RS17545	SM00842	Cell division protein FtsA
AC731_RS17565	SM00965	Secretin and TonB N terminus short domain
AC731_RS17580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AC731_RS17600	SM00267	diguanylate cyclase
AC731_RS17615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS17665	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS17680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS17680	SM00387	Histidine kinase-like ATPases
AC731_RS17680	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS17685	SM00448	cheY-homologous receiver domain
AC731_RS17685	SM00862	Transcriptional regulatory protein, C terminal
AC731_RS17740	SM00746	metallochaperone-like domain
AC731_RS17760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AC731_RS17775	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS17775	SM00091	PAS domain
AC731_RS17775	SM00387	Histidine kinase-like ATPases
AC731_RS17775	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS17775	SM00448	cheY-homologous receiver domain
AC731_RS17800	SM00342	helix_turn_helix, arabinose operon control protein
AC731_RS17805	SM00382	ATPases associated with a variety of cellular activities
AC731_RS17825	SM00382	ATPases associated with a variety of cellular activities
AC731_RS17850	SM00822	AC731_RS17850
AC731_RS17890	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS17905	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS17905	SM01091	Transporter associated domain
AC731_RS17930	SM00563	Phosphate acyltransferases
AC731_RS17960	SM00116	Domain in cystathionine beta-synthase and other proteins.
AC731_RS18000	SM00382	ATPases associated with a variety of cellular activities
AC731_RS18010	SM00382	ATPases associated with a variety of cellular activities
AC731_RS18040	SM00382	ATPases associated with a variety of cellular activities
AC731_RS18130	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AC731_RS18155	SM00881	CoA binding domain
AC731_RS18160	SM00240	Forkhead associated domain
AC731_RS18165	SM00849	Metallo-beta-lactamase superfamily
AC731_RS18170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AC731_RS18170	SM00382	ATPases associated with a variety of cellular activities
AC731_RS18220	SM00344	helix_turn_helix ASNC type
AC731_RS18235	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AC731_RS18245	SM00052	Putative diguanylate phosphodiesterase
AC731_RS18245	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS18245	SM00267	diguanylate cyclase
AC731_RS18245	SM00448	cheY-homologous receiver domain
AC731_RS18250	SM00073	Histidine Phosphotransfer domain
AC731_RS18250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS18250	SM00387	Histidine kinase-like ATPases
AC731_RS18250	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS18250	SM00448	cheY-homologous receiver domain
AC731_RS18260	SM00341	Helicase and RNase D C-terminal
AC731_RS18260	SM00487	DEAD-like helicases superfamily
AC731_RS18260	SM00490	helicase superfamily c-terminal domain
AC731_RS18260	SM00956	AC731_RS18260
AC731_RS18265	SM00422	helix_turn_helix, mercury resistance
AC731_RS18310	SM00822	AC731_RS18310
AC731_RS18395	SM00563	Phosphate acyltransferases
AC731_RS18430	SM00878	Biotin carboxylase C-terminal domain
AC731_RS18455	SM00749	bacterial OsmY and nodulation domain
AC731_RS18555	SM00842	Cell division protein FtsA
AC731_RS18560	SM00864	Tubulin/FtsZ family, GTPase domain
AC731_RS18560	SM00865	Tubulin/FtsZ family, C-terminal domain
AC731_RS18580	SM00957	SecA DEAD-like domain
AC731_RS18580	SM00958	SecA preprotein cross-linking domain
AC731_RS18585	SM00382	ATPases associated with a variety of cellular activities
AC731_RS18650	SM01323	AC731_RS18650
AC731_RS18710	SM01007	Class II Aldolase and Adducin N-terminal domain
AC731_RS18730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AC731_RS18730	SM00895	AC731_RS18730
AC731_RS18775	SM00977	TilS substrate C-terminal domain
AC731_RS18780	SM00421	helix_turn_helix, Lux Regulon
AC731_RS18780	SM00448	cheY-homologous receiver domain
AC731_RS18785	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS18785	SM00091	PAS domain
AC731_RS18785	SM00387	Histidine kinase-like ATPases
AC731_RS18785	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS18805	SM00562	AC731_RS18805
AC731_RS18815	SM00028	Tetratricopeptide repeats
AC731_RS18840	SM00564	beta-propeller repeat
AC731_RS18845	SM00382	ATPases associated with a variety of cellular activities
AC731_RS18860	SM00244	prohibitin homologues
AC731_RS18865	SM00244	prohibitin homologues
AC731_RS18880	SM00788	Adenylosuccinate synthetase
AC731_RS18895	SM00316	Ribosomal protein S1-like RNA-binding domain
AC731_RS18895	SM00357	Cold shock protein domain
AC731_RS18895	SM00955	AC731_RS18895
AC731_RS18900	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AC731_RS18910	SM00052	Putative diguanylate phosphodiesterase
AC731_RS18910	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AC731_RS18910	SM00091	PAS domain
AC731_RS18910	SM00267	diguanylate cyclase
AC731_RS18950	SM00382	ATPases associated with a variety of cellular activities
AC731_RS18960	SM00493	AC731_RS18960
AC731_RS19030	SM00861	Transketolase, pyrimidine binding domain
AC731_RS19090	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AC731_RS19115	SM00331	Sigma factor PP2C-like phosphatases
AC731_RS19115	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AC731_RS19120	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AC731_RS19120	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AC731_RS19140	SM00052	Putative diguanylate phosphodiesterase
AC731_RS19140	SM00091	PAS domain
AC731_RS19145	SM00487	DEAD-like helicases superfamily
AC731_RS19145	SM00490	helicase superfamily c-terminal domain
AC731_RS19185	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AC731_RS19245	SM00855	Phosphoglycerate mutase family
AC731_RS19250	SM00880	AC731_RS19250
AC731_RS19250	SM01118	AC731_RS19250
AC731_RS19275	SM00729	Elongator protein 3, MiaB family, Radical SAM
AC731_RS19285	SM00382	ATPases associated with a variety of cellular activities
AC731_RS19285	SM00448	cheY-homologous receiver domain
AC731_RS19295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AC731_RS19295	SM00387	Histidine kinase-like ATPases
AC731_RS19295	SM00388	His Kinase A (phosphoacceptor) domain
AC731_RS19345	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AC731_RS19360	SM00363	S4 RNA-binding domain
