locus-tag class description DIE29_RS00005 PF00308 Bacterial dnaA protein DIE29_RS00005 PF11638 DnaA N-terminal domain DIE29_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DIE29_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DIE29_RS00010 PF02767 DNA polymerase III beta subunit, central domain DIE29_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DIE29_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS00015 PF18053 DNA gyrase B subunit insert domain DIE29_RS00015 PF01751 Toprim domain DIE29_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus DIE29_RS00015 PF00204 DNA gyrase B DIE29_RS00035 PF03144 Elongation factor Tu domain 2 DIE29_RS00035 PF16658 Class II release factor RF3, C-terminal domain DIE29_RS00035 PF00009 Elongation factor Tu GTP binding domain DIE29_RS00040 PF01145 SPFH domain / Band 7 family DIE29_RS00050 PF04381 Putative exonuclease, RdgC DIE29_RS00060 PF01479 S4 domain DIE29_RS00060 PF00849 RNA pseudouridylate synthase DIE29_RS00070 PF09285 Elongation factor P, C-terminal DIE29_RS00070 PF08207 Elongation factor P (EF-P) KOW-like domain DIE29_RS00070 PF01132 Elongation factor P (EF-P) OB domain DIE29_RS00080 PF00005 ABC transporter DIE29_RS00080 PF17760 UvrA interaction domain DIE29_RS00080 PF17755 UvrA DNA-binding domain DIE29_RS00090 PF01322 Cytochrome C' DIE29_RS00095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS00095 PF00672 HAMP domain DIE29_RS00095 PF02743 Cache domain DIE29_RS00100 PF13180 PDZ domain DIE29_RS00105 PF07715 TonB-dependent Receptor Plug Domain DIE29_RS00105 PF07660 Secretin and TonB N terminus short domain DIE29_RS00105 PF00593 TonB dependent receptor DIE29_RS00110 PF17946 RecC C-terminal domain DIE29_RS00115 PF01809 Putative membrane protein insertion efficiency factor DIE29_RS00120 PF02492 CobW/HypB/UreG, nucleotide-binding domain DIE29_RS00120 PF07683 Cobalamin synthesis protein cobW C-terminal domain DIE29_RS00125 PF01258 Prokaryotic dksA/traR C4-type zinc finger DIE29_RS00130 PF00155 Aminotransferase class I and II DIE29_RS00135 PF13406 Transglycosylase SLT domain DIE29_RS00140 PF00106 short chain dehydrogenase DIE29_RS00145 PF00043 Glutathione S-transferase, C-terminal domain DIE29_RS00145 PF02798 Glutathione S-transferase, N-terminal domain DIE29_RS00150 PF12697 Alpha/beta hydrolase family DIE29_RS00175 PF01171 PP-loop family DIE29_RS00185 PF01676 Metalloenzyme superfamily DIE29_RS00185 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DIE29_RS00190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS00190 PF08447 PAS fold DIE29_RS00190 PF13426 PAS domain DIE29_RS00200 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS00200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS00205 PF00196 Bacterial regulatory proteins, luxR family DIE29_RS00205 PF00072 Response regulator receiver domain DIE29_RS00210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DIE29_RS00210 PF00384 Molybdopterin oxidoreductase DIE29_RS00210 PF01568 Molydopterin dinucleotide binding domain DIE29_RS00215 PF03916 Polysulphide reductase, NrfD DIE29_RS00220 PF13247 4Fe-4S dicluster domain DIE29_RS00225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DIE29_RS00230 PF13361 UvrD-like helicase C-terminal domain DIE29_RS00230 PF00580 UvrD/REP helicase N-terminal domain DIE29_RS00235 PF00578 AhpC/TSA family DIE29_RS00245 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DIE29_RS00245 PF04055 Radical SAM superfamily DIE29_RS00250 PF03099 Biotin/lipoate A/B protein ligase family DIE29_RS00255 PF04359 Protein of unknown function (DUF493) DIE29_RS00260 PF01063 Amino-transferase class IV DIE29_RS00265 PF00768 D-alanyl-D-alanine carboxypeptidase DIE29_RS00265 PF07943 Penicillin-binding protein 5, C-terminal domain DIE29_RS00270 PF03330 Lytic transglycolase DIE29_RS00270 PF05036 Sporulation related domain DIE29_RS00275 PF01098 Cell cycle protein DIE29_RS00280 PF03717 Penicillin-binding Protein dimerisation domain DIE29_RS00280 PF00905 Penicillin binding protein transpeptidase domain DIE29_RS00290 PF04085 rod shape-determining protein MreC DIE29_RS00300 PF02686 Glu-tRNAGln amidotransferase C subunit DIE29_RS00305 PF01425 Amidase DIE29_RS00310 PF02637 GatB domain DIE29_RS00310 PF02934 GatB/GatE catalytic domain DIE29_RS00315 PF00730 HhH-GPD superfamily base excision DNA repair protein DIE29_RS00315 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DIE29_RS00325 PF01435 Peptidase family M48 DIE29_RS00330 PF00551 Formyl transferase DIE29_RS00330 PF02911 Formyl transferase, C-terminal domain DIE29_RS00335 PF01327 Polypeptide deformylase DIE29_RS00340 PF01476 LysM domain DIE29_RS00345 PF02481 DNA recombination-mediator protein A DIE29_RS00345 PF17782 DprA winged helix domain DIE29_RS00350 PF04361 Protein of unknown function (DUF494) DIE29_RS00355 PF01131 DNA topoisomerase DIE29_RS00355 PF01751 Toprim domain DIE29_RS00360 PF00210 Ferritin-like domain DIE29_RS00365 PF03466 LysR substrate binding domain DIE29_RS00365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS00370 PF11849 Domain of unknown function (DUF3369) DIE29_RS00410 PF06508 Queuosine biosynthesis protein QueC DIE29_RS00415 PF04055 Radical SAM superfamily DIE29_RS00425 PF00691 OmpA family DIE29_RS00430 PF07676 WD40-like Beta Propeller Repeat DIE29_RS00430 PF04052 TolB amino-terminal domain DIE29_RS00440 PF02472 Biopolymer transport protein ExbD/TolR DIE29_RS00445 PF01618 MotA/TolQ/ExbB proton channel family DIE29_RS00450 PF03061 Thioesterase superfamily DIE29_RS00460 PF00227 Proteasome subunit DIE29_RS00465 PF07724 AAA domain (Cdc48 subfamily) DIE29_RS00465 PF10431 C-terminal, D2-small domain, of ClpB protein DIE29_RS00465 PF00004 ATPase family associated with various cellular activities (AAA) DIE29_RS00470 PF08245 Mur ligase middle domain DIE29_RS00470 PF08443 RimK-like ATP-grasp domain DIE29_RS00470 PF02875 Mur ligase family, glutamate ligase domain DIE29_RS00475 PF02875 Mur ligase family, glutamate ligase domain DIE29_RS00475 PF08245 Mur ligase middle domain DIE29_RS00475 PF08443 RimK-like ATP-grasp domain DIE29_RS00480 PF00664 ABC transporter transmembrane region DIE29_RS00480 PF00005 ABC transporter DIE29_RS00495 PF00009 Elongation factor Tu GTP binding domain DIE29_RS00500 PF01507 Phosphoadenosine phosphosulfate reductase family DIE29_RS00505 PF01507 Phosphoadenosine phosphosulfate reductase family DIE29_RS00515 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DIE29_RS00515 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DIE29_RS00520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS00520 PF03466 LysR substrate binding domain DIE29_RS00525 PF17763 Glutaminase/Asparaginase C-terminal domain DIE29_RS00525 PF00710 Asparaginase, N-terminal DIE29_RS00530 PF00206 Lyase DIE29_RS00530 PF10415 Fumarase C C-terminus DIE29_RS00535 PF00005 ABC transporter DIE29_RS00535 PF00664 ABC transporter transmembrane region DIE29_RS00555 PF09317 Domain of unknown function (DUF1974) DIE29_RS00555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DIE29_RS00555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DIE29_RS00560 PF02803 Thiolase, C-terminal domain DIE29_RS00560 PF00108 Thiolase, N-terminal domain DIE29_RS00570 PF00378 Enoyl-CoA hydratase/isomerase DIE29_RS00570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DIE29_RS00570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DIE29_RS00580 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DIE29_RS00585 PF00378 Enoyl-CoA hydratase/isomerase DIE29_RS00585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DIE29_RS00585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DIE29_RS00590 PF00108 Thiolase, N-terminal domain DIE29_RS00590 PF02803 Thiolase, C-terminal domain DIE29_RS00600 PF11973 NQRA C-terminal domain DIE29_RS00600 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DIE29_RS00605 PF03116 NQR2, RnfD, RnfE family DIE29_RS00610 PF04205 FMN-binding domain DIE29_RS00615 PF02508 Rnf-Nqr subunit, membrane protein DIE29_RS00620 PF02508 Rnf-Nqr subunit, membrane protein DIE29_RS00625 PF00970 Oxidoreductase FAD-binding domain DIE29_RS00625 PF00175 Oxidoreductase NAD-binding domain DIE29_RS00625 PF00111 2Fe-2S iron-sulfur cluster binding domain DIE29_RS00630 PF00378 Enoyl-CoA hydratase/isomerase DIE29_RS00640 PF01053 Cys/Met metabolism PLP-dependent enzyme DIE29_RS00655 PF02623 FliW protein DIE29_RS00660 PF01042 Endoribonuclease L-PSP DIE29_RS00665 PF17191 RecG wedge domain DIE29_RS00665 PF00271 Helicase conserved C-terminal domain DIE29_RS00665 PF00270 DEAD/DEAH box helicase DIE29_RS00670 PF04345 Chorismate lyase DIE29_RS00675 PF01040 UbiA prenyltransferase family DIE29_RS00680 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DIE29_RS00690 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DIE29_RS00700 PF16363 GDP-mannose 4,6 dehydratase DIE29_RS00705 PF04321 RmlD substrate binding domain DIE29_RS00715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DIE29_RS00715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DIE29_RS00725 PF01491 Frataxin-like domain DIE29_RS00730 PF00905 Penicillin binding protein transpeptidase domain DIE29_RS00730 PF00912 Transglycosylase DIE29_RS00730 PF17092 Penicillin-binding protein OB-like domain DIE29_RS00735 PF11104 Type IV pilus assembly protein PilM; DIE29_RS00740 PF05137 Fimbrial assembly protein (PilN) DIE29_RS00745 PF04350 Pilus assembly protein, PilO DIE29_RS00755 PF11741 AMIN domain DIE29_RS00755 PF00263 Bacterial type II and III secretion system protein DIE29_RS00755 PF03958 Bacterial type II/III secretion system short domain DIE29_RS00755 PF07660 Secretin and TonB N terminus short domain DIE29_RS00760 PF01202 Shikimate kinase DIE29_RS00765 PF01761 3-dehydroquinate synthase DIE29_RS00770 PF13286 Phosphohydrolase-associated domain DIE29_RS00770 PF01966 HD domain DIE29_RS00775 PF00310 Glutamine amidotransferases class-II DIE29_RS00775 PF04898 Glutamate synthase central domain DIE29_RS00775 PF01645 Conserved region in glutamate synthase DIE29_RS00775 PF01493 GXGXG motif DIE29_RS00780 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DIE29_RS00780 PF07992 Pyridine nucleotide-disulphide oxidoreductase DIE29_RS00785 PF00871 Acetokinase family DIE29_RS00790 PF01515 Phosphate acetyl/butaryl transferase DIE29_RS00795 PF00132 Bacterial transferase hexapeptide (six repeats) DIE29_RS00795 PF12804 MobA-like NTP transferase domain DIE29_RS00800 PF01380 SIS domain DIE29_RS00830 PF02653 Branched-chain amino acid transport system / permease component DIE29_RS00830 PF11862 Domain of unknown function (DUF3382) DIE29_RS00835 PF02653 Branched-chain amino acid transport system / permease component DIE29_RS00840 PF03060 Nitronate monooxygenase DIE29_RS00845 PF03458 UPF0126 domain DIE29_RS00860 PF08448 PAS fold DIE29_RS00860 PF08447 PAS fold DIE29_RS00860 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS00860 PF00563 EAL domain DIE29_RS00875 PF01790 Prolipoprotein diacylglyceryl transferase DIE29_RS00880 PF04337 Protein of unknown function, DUF480 DIE29_RS00885 PF00920 Dehydratase family DIE29_RS00895 PF01297 Zinc-uptake complex component A periplasmic DIE29_RS00900 PF00950 ABC 3 transport family DIE29_RS00905 PF00005 ABC transporter DIE29_RS00910 PF01475 Ferric uptake regulator family DIE29_RS00920 PF00005 ABC transporter DIE29_RS00935 PF00730 HhH-GPD superfamily base excision DNA repair protein DIE29_RS00935 PF14815 NUDIX domain DIE29_RS00935 PF00633 Helix-hairpin-helix motif DIE29_RS00935 PF10576 Iron-sulfur binding domain of endonuclease III DIE29_RS00940 PF01613 Flavin reductase like domain DIE29_RS00945 PF07715 TonB-dependent Receptor Plug Domain DIE29_RS00945 PF00593 TonB dependent receptor DIE29_RS00960 PF01891 Cobalt uptake substrate-specific transmembrane region DIE29_RS00970 PF00005 ABC transporter DIE29_RS00975 PF01402 Ribbon-helix-helix protein, copG family DIE29_RS00975 PF08753 NikR C terminal nickel binding domain DIE29_RS00980 PF08447 PAS fold DIE29_RS00980 PF08448 PAS fold DIE29_RS00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS00985 PF00374 Nickel-dependent hydrogenase DIE29_RS00990 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DIE29_RS00990 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DIE29_RS00995 PF08447 PAS fold DIE29_RS00995 PF13426 PAS domain DIE29_RS00995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS01010 PF00072 Response regulator receiver domain DIE29_RS01010 PF00158 Sigma-54 interaction domain DIE29_RS01010 PF02954 Bacterial regulatory protein, Fis family DIE29_RS01015 PF00378 Enoyl-CoA hydratase/isomerase DIE29_RS01015 PF00551 Formyl transferase DIE29_RS01015 PF02911 Formyl transferase, C-terminal domain DIE29_RS01020 PF02769 AIR synthase related protein, C-terminal domain DIE29_RS01020 PF00586 AIR synthase related protein, N-terminal domain DIE29_RS01025 PF01924 Hydrogenase formation hypA family DIE29_RS01030 PF01455 HupF/HypC family DIE29_RS01035 PF00708 Acylphosphatase DIE29_RS01035 PF17788 HypF Kae1-like domain DIE29_RS01035 PF07503 HypF finger DIE29_RS01035 PF01300 Telomere recombination DIE29_RS01040 PF02492 CobW/HypB/UreG, nucleotide-binding domain DIE29_RS01045 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DIE29_RS01050 PF00374 Nickel-dependent hydrogenase DIE29_RS01055 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE DIE29_RS01060 PF00301 Rubredoxin DIE29_RS01060 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE DIE29_RS01065 PF04809 HupH hydrogenase expression protein, C-terminal conserved region DIE29_RS01070 PF07449 Hydrogenase-1 expression protein HyaE DIE29_RS01080 PF01750 Hydrogenase maturation protease DIE29_RS01085 PF01292 Prokaryotic cytochrome b561 DIE29_RS01090 PF00374 Nickel-dependent hydrogenase DIE29_RS01095 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DIE29_RS01095 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DIE29_RS01105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DIE29_RS01115 PF01070 FMN-dependent dehydrogenase DIE29_RS01120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS01120 PF03466 LysR substrate binding domain DIE29_RS01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS01125 PF03466 LysR substrate binding domain DIE29_RS01130 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DIE29_RS01130 PF00361 Proton-conducting membrane transporter DIE29_RS01130 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DIE29_RS01135 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DIE29_RS01140 PF01627 Hpt domain DIE29_RS01140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS01140 PF00072 Response regulator receiver domain DIE29_RS01140 PF00672 HAMP domain DIE29_RS01140 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DIE29_RS01140 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS01145 PF00072 Response regulator receiver domain DIE29_RS01150 PF05230 MASE2 domain DIE29_RS01150 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS01160 PF00166 Chaperonin 10 Kd subunit DIE29_RS01165 PF00118 TCP-1/cpn60 chaperonin family DIE29_RS01170 PF00132 Bacterial transferase hexapeptide (six repeats) DIE29_RS01175 PF00171 Aldehyde dehydrogenase family DIE29_RS01180 PF00378 Enoyl-CoA hydratase/isomerase DIE29_RS01185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DIE29_RS01185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DIE29_RS01185 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DIE29_RS01190 PF03061 Thioesterase superfamily DIE29_RS01195 PF00501 AMP-binding enzyme DIE29_RS01195 PF14535 AMP-binding enzyme C-terminal domain DIE29_RS01200 PF05138 Phenylacetic acid catabolic protein DIE29_RS01205 PF06243 Phenylacetic acid degradation B DIE29_RS01210 PF05138 Phenylacetic acid catabolic protein DIE29_RS01215 PF01883 Iron-sulfur cluster assembly protein DIE29_RS01220 PF00970 Oxidoreductase FAD-binding domain DIE29_RS01220 PF00175 Oxidoreductase NAD-binding domain DIE29_RS01220 PF00111 2Fe-2S iron-sulfur cluster binding domain DIE29_RS01230 PF00108 Thiolase, N-terminal domain DIE29_RS01230 PF02803 Thiolase, C-terminal domain DIE29_RS01235 PF13458 Periplasmic binding protein DIE29_RS01245 PF12399 Branched-chain amino acid ATP-binding cassette transporter DIE29_RS01245 PF00005 ABC transporter DIE29_RS01250 PF00005 ABC transporter DIE29_RS01260 PF00216 Bacterial DNA-binding protein DIE29_RS01265 PF00270 DEAD/DEAH box helicase DIE29_RS01265 PF00271 Helicase conserved C-terminal domain DIE29_RS01270 PF01029 NusB family DIE29_RS01275 PF00885 6,7-dimethyl-8-ribityllumazine synthase DIE29_RS01280 PF00925 GTP cyclohydrolase II DIE29_RS01280 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DIE29_RS01285 PF00677 Lumazine binding domain DIE29_RS01290 PF02683 Cytochrome C biogenesis protein transmembrane region DIE29_RS01290 PF11412 Disulphide bond corrector protein DsbC DIE29_RS01300 PF00043 Glutathione S-transferase, C-terminal domain DIE29_RS01300 PF13417 Glutathione S-transferase, N-terminal domain DIE29_RS01305 PF00561 alpha/beta hydrolase fold DIE29_RS01320 PF02036 SCP-2 sterol transfer family DIE29_RS01325 PF01136 Peptidase family U32 DIE29_RS01330 PF01136 Peptidase family U32 DIE29_RS01340 PF00202 Aminotransferase class-III DIE29_RS01345 PF03109 ABC1 family DIE29_RS01350 PF05746 DALR anticodon binding domain DIE29_RS01350 PF03485 Arginyl tRNA synthetase N terminal domain DIE29_RS01350 PF00750 tRNA synthetases class I (R) DIE29_RS01360 PF00085 Thioredoxin DIE29_RS01360 PF01323 DSBA-like thioredoxin domain DIE29_RS01375 PF16868 NMT1-like family DIE29_RS01380 PF01266 FAD dependent oxidoreductase DIE29_RS01385 PF03466 LysR substrate binding domain DIE29_RS01385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS01395 PF03453 MoeA N-terminal region (domain I and II) DIE29_RS01395 PF03454 MoeA C-terminal region (domain IV) DIE29_RS01395 PF00994 Probable molybdopterin binding domain DIE29_RS01400 PF12800 4Fe-4S binding domain DIE29_RS01400 PF13247 4Fe-4S dicluster domain DIE29_RS01405 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain DIE29_RS01405 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 DIE29_RS01410 PF07992 Pyridine nucleotide-disulphide oxidoreductase DIE29_RS01410 PF18267 Rubredoxin NAD+ reductase C-terminal domain DIE29_RS01410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DIE29_RS01410 PF04324 BFD-like [2Fe-2S] binding domain DIE29_RS01425 PF00528 Binding-protein-dependent transport system inner membrane component DIE29_RS01430 PF09383 NIL domain DIE29_RS01430 PF00005 ABC transporter DIE29_RS01435 PF12849 PBP superfamily domain DIE29_RS01445 PF00561 alpha/beta hydrolase fold DIE29_RS01445 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DIE29_RS01455 PF13411 MerR HTH family regulatory protein DIE29_RS01465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DIE29_RS01465 PF02770 Acyl-CoA dehydrogenase, middle domain DIE29_RS01465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DIE29_RS01470 PF00108 Thiolase, N-terminal domain DIE29_RS01470 PF02803 Thiolase, C-terminal domain DIE29_RS01475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DIE29_RS01475 PF02770 Acyl-CoA dehydrogenase, middle domain DIE29_RS01475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DIE29_RS01485 PF02311 AraC-like ligand binding domain DIE29_RS01485 PF12833 Helix-turn-helix domain DIE29_RS01490 PF01039 Carboxyl transferase domain DIE29_RS01500 PF00364 Biotin-requiring enzyme DIE29_RS01500 PF00289 Biotin carboxylase, N-terminal domain DIE29_RS01500 PF02785 Biotin carboxylase C-terminal domain DIE29_RS01500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DIE29_RS01505 PF00682 HMGL-like DIE29_RS01525 PF01235 Sodium:alanine symporter family DIE29_RS01530 PF03668 P-loop ATPase protein family DIE29_RS01545 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS01545 PF08521 Two-component sensor kinase N-terminal DIE29_RS01550 PF00072 Response regulator receiver domain DIE29_RS01550 PF00486 Transcriptional regulatory protein, C terminal DIE29_RS01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS01560 PF00072 Response regulator receiver domain DIE29_RS01560 PF00486 Transcriptional regulatory protein, C terminal DIE29_RS01570 PF09086 Domain of unknown function (DUF1924) DIE29_RS01580 PF00970 Oxidoreductase FAD-binding domain DIE29_RS01580 PF00111 2Fe-2S iron-sulfur cluster binding domain DIE29_RS01580 PF00175 Oxidoreductase NAD-binding domain DIE29_RS01585 PF00291 Pyridoxal-phosphate dependent enzyme DIE29_RS01590 PF01339 CheB methylesterase DIE29_RS01590 PF00072 Response regulator receiver domain DIE29_RS01595 PF03975 CheD chemotactic sensory transduction DIE29_RS01600 PF03705 CheR methyltransferase, all-alpha domain DIE29_RS01600 PF01739 CheR methyltransferase, SAM binding domain DIE29_RS01605 PF00672 HAMP domain DIE29_RS01605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS01605 PF16591 Helical bimodular sensor domain DIE29_RS01610 PF01584 CheW-like domain DIE29_RS01615 PF02743 Cache domain DIE29_RS01615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS01615 PF00672 HAMP domain DIE29_RS01620 PF01584 CheW-like domain DIE29_RS01620 PF02895 Signal transducing histidine kinase, homodimeric domain DIE29_RS01620 PF01627 Hpt domain DIE29_RS01620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS01630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS01630 PF00672 HAMP domain DIE29_RS01635 PF00072 Response regulator receiver domain DIE29_RS01640 PF02075 Crossover junction endodeoxyribonuclease RuvC DIE29_RS01645 PF01906 Putative heavy-metal-binding DIE29_RS01655 PF01709 Transcriptional regulator DIE29_RS01665 PF05872 Bacterial protein of unknown function (DUF853) DIE29_RS01675 PF02219 Methylenetetrahydrofolate reductase DIE29_RS01680 PF01728 FtsJ-like methyltransferase DIE29_RS01680 PF01479 S4 domain DIE29_RS01685 PF05221 S-adenosyl-L-homocysteine hydrolase DIE29_RS01685 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DIE29_RS01690 PF01699 Sodium/calcium exchanger protein DIE29_RS01695 PF00438 S-adenosylmethionine synthetase, N-terminal domain DIE29_RS01695 PF02773 S-adenosylmethionine synthetase, C-terminal domain DIE29_RS01695 PF02772 S-adenosylmethionine synthetase, central domain DIE29_RS01705 PF03279 Bacterial lipid A biosynthesis acyltransferase DIE29_RS01715 PF01678 Diaminopimelate epimerase DIE29_RS01725 PF02899 Phage integrase, N-terminal SAM-like domain DIE29_RS01725 PF00589 Phage integrase family DIE29_RS01740 PF17785 PUA-like domain DIE29_RS01740 PF10672 S-adenosylmethionine-dependent methyltransferase DIE29_RS01755 PF17864 RuvB AAA lid domain DIE29_RS01755 PF05491 RuvB C-terminal winged helix domain DIE29_RS01755 PF05496 Holliday junction DNA helicase RuvB P-loop domain DIE29_RS01765 PF01330 RuvA N terminal domain DIE29_RS01765 PF07499 RuvA, C-terminal domain DIE29_RS01775 PF00575 S1 RNA binding domain DIE29_RS01775 PF10150 Ribonuclease E/G family DIE29_RS01780 PF02545 Maf-like protein DIE29_RS01785 PF02590 Predicted SPOUT methyltransferase DIE29_RS01795 PF01467 Cytidylyltransferase-like DIE29_RS01810 PF01636 Phosphotransferase enzyme family DIE29_RS01820 PF03641 Possible lysine decarboxylase DIE29_RS01825 PF01612 3'-5' exonuclease DIE29_RS01825 PF00476 DNA polymerase family A DIE29_RS01825 PF01367 5'-3' exonuclease, C-terminal SAM fold DIE29_RS01825 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DIE29_RS01830 PF00009 Elongation factor Tu GTP binding domain DIE29_RS01835 PF00459 Inositol monophosphatase family DIE29_RS01840 PF03600 Citrate transporter DIE29_RS01840 PF02080 TrkA-C domain DIE29_RS01845 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DIE29_RS01845 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DIE29_RS01845 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DIE29_RS01850 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DIE29_RS01855 PF00483 Nucleotidyl transferase DIE29_RS01860 PF04542 Sigma-70 region 2 DIE29_RS01860 PF04545 Sigma-70, region 4 DIE29_RS01860 PF00140 Sigma-70 factor, region 1.2 DIE29_RS01865 PF01040 UbiA prenyltransferase family DIE29_RS01870 PF02628 Cytochrome oxidase assembly protein DIE29_RS01890 PF00510 Cytochrome c oxidase subunit III DIE29_RS01900 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DIE29_RS01905 PF00115 Cytochrome C and Quinol oxidase polypeptide I DIE29_RS01910 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DIE29_RS01910 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DIE29_RS01920 PF01497 Periplasmic binding protein DIE29_RS01925 PF00155 Aminotransferase class I and II DIE29_RS01930 PF03186 CobD/Cbib protein DIE29_RS01935 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DIE29_RS01935 PF07685 CobB/CobQ-like glutamine amidotransferase domain DIE29_RS01965 PF16868 NMT1-like family DIE29_RS01970 PF02515 CoA-transferase family III DIE29_RS01975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DIE29_RS01975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DIE29_RS01975 PF02770 Acyl-CoA dehydrogenase, middle domain DIE29_RS01980 PF09339 IclR helix-turn-helix domain DIE29_RS01985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS01985 PF16591 Helical bimodular sensor domain DIE29_RS01985 PF00672 HAMP domain DIE29_RS01995 PF00378 Enoyl-CoA hydratase/isomerase DIE29_RS02000 PF01595 Cyclin M transmembrane N-terminal domain DIE29_RS02000 PF03471 Transporter associated domain DIE29_RS02000 PF00571 CBS domain DIE29_RS02005 PF07729 FCD domain DIE29_RS02005 PF00392 Bacterial regulatory proteins, gntR family DIE29_RS02010 PF02310 B12 binding domain DIE29_RS02010 PF01642 Methylmalonyl-CoA mutase DIE29_RS02020 PF01039 Carboxyl transferase domain DIE29_RS02030 PF00289 Biotin carboxylase, N-terminal domain DIE29_RS02030 PF02785 Biotin carboxylase C-terminal domain DIE29_RS02030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DIE29_RS02030 PF00364 Biotin-requiring enzyme DIE29_RS02030 PF18140 Propionyl-coenzyme A carboxylase BT domain DIE29_RS02045 PF00072 Response regulator receiver domain DIE29_RS02045 PF00486 Transcriptional regulatory protein, C terminal DIE29_RS02050 PF00072 Response regulator receiver domain DIE29_RS02050 PF13426 PAS domain DIE29_RS02050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS02060 PF02310 B12 binding domain DIE29_RS02060 PF01642 Methylmalonyl-CoA mutase DIE29_RS02065 PF00563 EAL domain DIE29_RS02065 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS02065 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS02070 PF00501 AMP-binding enzyme DIE29_RS02075 PF12399 Branched-chain amino acid ATP-binding cassette transporter DIE29_RS02075 PF00005 ABC transporter DIE29_RS02080 PF02653 Branched-chain amino acid transport system / permease component DIE29_RS02095 PF00005 ABC transporter DIE29_RS02105 PF02515 CoA-transferase family III DIE29_RS02115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS02115 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS02125 PF00072 Response regulator receiver domain DIE29_RS02125 PF00196 Bacterial regulatory proteins, luxR family DIE29_RS02135 PF00891 O-methyltransferase domain DIE29_RS02145 PF02913 FAD linked oxidases, C-terminal domain DIE29_RS02145 PF01565 FAD binding domain DIE29_RS02165 PF00009 Elongation factor Tu GTP binding domain DIE29_RS02165 PF03144 Elongation factor Tu domain 2 DIE29_RS02165 PF03143 Elongation factor Tu C-terminal domain DIE29_RS02175 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DIE29_RS02180 PF00467 KOW motif DIE29_RS02180 PF02357 Transcription termination factor nusG DIE29_RS02185 PF00298 Ribosomal protein L11, RNA binding domain DIE29_RS02185 PF03946 Ribosomal protein L11, N-terminal domain DIE29_RS02190 PF00687 Ribosomal protein L1p/L10e family DIE29_RS02195 PF00466 Ribosomal protein L10 DIE29_RS02200 PF00542 Ribosomal protein L7/L12 C-terminal domain DIE29_RS02200 PF16320 Ribosomal protein L7/L12 dimerisation domain DIE29_RS02205 PF04560 RNA polymerase Rpb2, domain 7 DIE29_RS02205 PF04565 RNA polymerase Rpb2, domain 3 DIE29_RS02205 PF00562 RNA polymerase Rpb2, domain 6 DIE29_RS02205 PF10385 RNA polymerase beta subunit external 1 domain DIE29_RS02205 PF04561 RNA polymerase Rpb2, domain 2 DIE29_RS02205 PF04563 RNA polymerase beta subunit DIE29_RS02210 PF00623 RNA polymerase Rpb1, domain 2 DIE29_RS02210 PF04998 RNA polymerase Rpb1, domain 5 DIE29_RS02210 PF04997 RNA polymerase Rpb1, domain 1 DIE29_RS02210 PF04983 RNA polymerase Rpb1, domain 3 DIE29_RS02210 PF05000 RNA polymerase Rpb1, domain 4 DIE29_RS02215 PF00164 Ribosomal protein S12/S23 DIE29_RS02220 PF00177 Ribosomal protein S7p/S5e DIE29_RS02225 PF00679 Elongation factor G C-terminus DIE29_RS02225 PF14492 Elongation Factor G, domain II DIE29_RS02225 PF03764 Elongation factor G, domain IV DIE29_RS02225 PF00009 Elongation factor Tu GTP binding domain DIE29_RS02225 PF03144 Elongation factor Tu domain 2 DIE29_RS02230 PF03144 Elongation factor Tu domain 2 DIE29_RS02230 PF03143 Elongation factor Tu C-terminal domain DIE29_RS02230 PF00009 Elongation factor Tu GTP binding domain DIE29_RS02235 PF00338 Ribosomal protein S10p/S20e DIE29_RS02240 PF00297 Ribosomal protein L3 DIE29_RS02245 PF00573 Ribosomal protein L4/L1 family DIE29_RS02250 PF00276 Ribosomal protein L23 DIE29_RS02255 PF00181 Ribosomal Proteins L2, RNA binding domain DIE29_RS02255 PF03947 Ribosomal Proteins L2, C-terminal domain DIE29_RS02260 PF00203 Ribosomal protein S19 DIE29_RS02265 PF00237 Ribosomal protein L22p/L17e DIE29_RS02270 PF07650 KH domain DIE29_RS02270 PF00189 Ribosomal protein S3, C-terminal domain DIE29_RS02275 PF00252 Ribosomal protein L16p/L10e DIE29_RS02280 PF00831 Ribosomal L29 protein DIE29_RS02285 PF00366 Ribosomal protein S17 DIE29_RS02290 PF00238 Ribosomal protein L14p/L23e DIE29_RS02295 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DIE29_RS02300 PF00281 Ribosomal protein L5 DIE29_RS02300 PF00673 ribosomal L5P family C-terminus DIE29_RS02305 PF00253 Ribosomal protein S14p/S29e DIE29_RS02310 PF00410 Ribosomal protein S8 DIE29_RS02315 PF00347 Ribosomal protein L6 DIE29_RS02320 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DIE29_RS02325 PF03719 Ribosomal protein S5, C-terminal domain DIE29_RS02325 PF00333 Ribosomal protein S5, N-terminal domain DIE29_RS02330 PF00327 Ribosomal protein L30p/L7e DIE29_RS02335 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DIE29_RS02340 PF00344 SecY translocase DIE29_RS02345 PF01176 Translation initiation factor 1A / IF-1 DIE29_RS02350 PF00444 Ribosomal protein L36 DIE29_RS02355 PF00416 Ribosomal protein S13/S18 DIE29_RS02360 PF00411 Ribosomal protein S11 DIE29_RS02365 PF00163 Ribosomal protein S4/S9 N-terminal domain DIE29_RS02365 PF01479 S4 domain DIE29_RS02370 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DIE29_RS02370 PF01000 RNA polymerase Rpb3/RpoA insert domain DIE29_RS02370 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DIE29_RS02375 PF01196 Ribosomal protein L17 DIE29_RS02380 PF16363 GDP-mannose 4,6 dehydratase DIE29_RS02395 PF17760 UvrA interaction domain DIE29_RS02395 PF17755 UvrA DNA-binding domain DIE29_RS02400 PF07690 Major Facilitator Superfamily DIE29_RS02405 PF00436 Single-strand binding protein family DIE29_RS02415 PF00155 Aminotransferase class I and II DIE29_RS02475 PF17482 Phage tail sheath C-terminal domain DIE29_RS02475 PF04984 Phage tail sheath protein subtilisin-like domain DIE29_RS02620 PF09077 Mu B transposition protein, C terminal DIE29_RS02620 PF13401 AAA domain DIE29_RS02650 PF00899 ThiF family DIE29_RS02665 PF00873 AcrB/AcrD/AcrF family DIE29_RS02680 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DIE29_RS02680 PF14489 QueF-like protein DIE29_RS02685 PF00034 Cytochrome c DIE29_RS02690 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS02690 PF00563 EAL domain DIE29_RS02690 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS02695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS02695 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS02695 PF00989 PAS fold DIE29_RS02700 PF00563 EAL domain DIE29_RS02700 PF08668 HDOD domain DIE29_RS02705 PF00970 Oxidoreductase FAD-binding domain DIE29_RS02705 PF00111 2Fe-2S iron-sulfur cluster binding domain DIE29_RS02705 PF00175 Oxidoreductase NAD-binding domain DIE29_RS02715 PF03653 Uncharacterised protein family (UPF0093) DIE29_RS02720 PF12804 MobA-like NTP transferase domain DIE29_RS02725 PF02926 THUMP domain DIE29_RS02725 PF01170 Putative RNA methylase family UPF0020 DIE29_RS02730 PF00437 Type II/IV secretion system protein DIE29_RS02735 PF00437 Type II/IV secretion system protein DIE29_RS02740 PF01168 Alanine racemase, N-terminal domain DIE29_RS02745 PF03807 NADP oxidoreductase coenzyme F420-dependent DIE29_RS02745 PF14748 Pyrroline-5-carboxylate reductase dimerisation DIE29_RS02750 PF02325 YGGT family DIE29_RS02755 PF02594 Uncharacterised ACR, YggU family COG1872 DIE29_RS02770 PF01979 Amidohydrolase family DIE29_RS02775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DIE29_RS02775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DIE29_RS02780 PF00156 Phosphoribosyl transferase domain DIE29_RS02785 PF03652 Holliday junction resolvase DIE29_RS02790 PF02622 Uncharacterized ACR, COG1678 DIE29_RS02795 PF03441 FAD binding domain of DNA photolyase DIE29_RS02795 PF00875 DNA photolyase DIE29_RS02800 PF01584 CheW-like domain DIE29_RS02800 PF02895 Signal transducing histidine kinase, homodimeric domain DIE29_RS02800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS02800 PF07194 P2 response regulator binding domain DIE29_RS02800 PF01627 Hpt domain DIE29_RS02805 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DIE29_RS02805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS02810 PF01584 CheW-like domain DIE29_RS02815 PF00072 Response regulator receiver domain DIE29_RS02820 PF00072 Response regulator receiver domain DIE29_RS02825 PF00301 Rubredoxin DIE29_RS02830 PF02581 Thiamine monophosphate synthase DIE29_RS02835 PF00202 Aminotransferase class-III DIE29_RS02840 PF01494 FAD binding domain DIE29_RS02845 PF10411 Disulfide bond isomerase protein N-terminus DIE29_RS02845 PF13098 Thioredoxin-like domain DIE29_RS02850 PF03562 MltA specific insert domain DIE29_RS02850 PF06725 3D domain DIE29_RS02860 PF00293 NUDIX domain DIE29_RS02865 PF03884 DNA gyrase inhibitor YacG DIE29_RS02870 PF07072 Cell division protein DIE29_RS02875 PF01121 Dephospho-CoA kinase DIE29_RS02885 PF00291 Pyridoxal-phosphate dependent enzyme DIE29_RS02890 PF03309 Type III pantothenate kinase DIE29_RS02895 PF02237 Biotin protein ligase C terminal domain DIE29_RS02895 PF03099 Biotin/lipoate A/B protein ligase family DIE29_RS02900 PF00072 Response regulator receiver domain DIE29_RS02900 PF00158 Sigma-54 interaction domain DIE29_RS02900 PF02954 Bacterial regulatory protein, Fis family DIE29_RS02905 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS02905 PF00989 PAS fold DIE29_RS02915 PF00120 Glutamine synthetase, catalytic domain DIE29_RS02915 PF03951 Glutamine synthetase, beta-Grasp domain DIE29_RS02920 PF16916 Dimerisation domain of Zinc Transporter DIE29_RS02920 PF01545 Cation efflux family DIE29_RS02930 PF02445 Quinolinate synthetase A protein DIE29_RS02940 PF07883 Cupin domain DIE29_RS02945 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DIE29_RS02950 PF03372 Endonuclease/Exonuclease/phosphatase family DIE29_RS02955 PF13091 PLD-like domain DIE29_RS02960 PF13380 CoA binding domain DIE29_RS02965 PF00749 tRNA synthetases class I (E and Q), catalytic domain DIE29_RS02985 PF01381 Helix-turn-helix DIE29_RS03080 PF01740 STAS domain DIE29_RS03080 PF00916 Sulfate permease family DIE29_RS03085 PF00582 Universal stress protein family DIE29_RS03095 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DIE29_RS03105 PF00892 EamA-like transporter family DIE29_RS03115 PF00005 ABC transporter DIE29_RS03115 PF03459 TOBE domain DIE29_RS03120 PF00528 Binding-protein-dependent transport system inner membrane component DIE29_RS03135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS03135 PF03459 TOBE domain DIE29_RS03140 PF02190 ATP-dependent protease La (LON) substrate-binding domain DIE29_RS03140 PF05362 Lon protease (S16) C-terminal proteolytic domain DIE29_RS03140 PF00004 ATPase family associated with various cellular activities (AAA) DIE29_RS03205 PF12137 RNA polymerase recycling family C-terminal DIE29_RS03205 PF18337 RapA N-terminal Tudor like domain DIE29_RS03205 PF18339 RapA N-terminal Tudor like domain 1 DIE29_RS03205 PF00271 Helicase conserved C-terminal domain DIE29_RS03205 PF00176 SNF2 family N-terminal domain DIE29_RS03210 PF09369 Domain of unknown function (DUF1998) DIE29_RS03210 PF00271 Helicase conserved C-terminal domain DIE29_RS03210 PF00270 DEAD/DEAH box helicase DIE29_RS03240 PF13356 Arm DNA-binding domain DIE29_RS03240 PF00589 Phage integrase family DIE29_RS03245 PF06071 Protein of unknown function (DUF933) DIE29_RS03245 PF01926 50S ribosome-binding GTPase DIE29_RS03250 PF01195 Peptidyl-tRNA hydrolase DIE29_RS03255 PF01386 Ribosomal L25p family DIE29_RS03255 PF14693 Ribosomal protein TL5, C-terminal domain DIE29_RS03260 PF14572 Phosphoribosyl synthetase-associated domain DIE29_RS03260 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DIE29_RS03270 PF00288 GHMP kinases N terminal domain DIE29_RS03270 PF08544 GHMP kinases C terminal DIE29_RS03275 PF03550 Outer membrane lipoprotein LolB DIE29_RS03285 PF06827 Zinc finger found in FPG and IleRS DIE29_RS03285 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DIE29_RS03285 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DIE29_RS03290 PF00350 Dynamin family DIE29_RS03295 PF00037 4Fe-4S binding domain DIE29_RS03300 PF01467 Cytidylyltransferase-like DIE29_RS03310 PF00675 Insulinase (Peptidase family M16) DIE29_RS03310 PF05193 Peptidase M16 inactive domain DIE29_RS03315 PF05193 Peptidase M16 inactive domain DIE29_RS03315 PF00675 Insulinase (Peptidase family M16) DIE29_RS03320 PF00448 SRP54-type protein, GTPase domain DIE29_RS03320 PF02881 SRP54-type protein, helical bundle domain DIE29_RS03325 PF00005 ABC transporter DIE29_RS03330 PF18075 FtsX extracellular domain DIE29_RS03335 PF00578 AhpC/TSA family DIE29_RS03335 PF10417 C-terminal domain of 1-Cys peroxiredoxin DIE29_RS03340 PF07992 Pyridine nucleotide-disulphide oxidoreductase DIE29_RS03340 PF13192 Thioredoxin domain DIE29_RS03345 PF00005 ABC transporter DIE29_RS03345 PF00664 ABC transporter transmembrane region DIE29_RS03355 PF08328 Adenylosuccinate lyase C-terminal DIE29_RS03355 PF00206 Lyase DIE29_RS03365 PF02355 Protein export membrane protein DIE29_RS03365 PF07549 SecD/SecF GG Motif DIE29_RS03370 PF02355 Protein export membrane protein DIE29_RS03370 PF13721 SecD export protein N-terminal TM region DIE29_RS03370 PF07549 SecD/SecF GG Motif DIE29_RS03375 PF02699 Preprotein translocase subunit DIE29_RS03385 PF03180 NLPA lipoprotein DIE29_RS03390 PF00528 Binding-protein-dependent transport system inner membrane component DIE29_RS03395 PF00005 ABC transporter DIE29_RS03395 PF09383 NIL domain DIE29_RS03400 PF00005 ABC transporter DIE29_RS03405 PF00005 ABC transporter DIE29_RS03405 PF12399 Branched-chain amino acid ATP-binding cassette transporter DIE29_RS03410 PF11862 Domain of unknown function (DUF3382) DIE29_RS03410 PF02653 Branched-chain amino acid transport system / permease component DIE29_RS03415 PF02653 Branched-chain amino acid transport system / permease component DIE29_RS03420 PF13458 Periplasmic binding protein DIE29_RS03425 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DIE29_RS03425 PF14850 DNA-binding domain of Proline dehydrogenase DIE29_RS03425 PF01619 Proline dehydrogenase DIE29_RS03425 PF00171 Aldehyde dehydrogenase family DIE29_RS03430 PF01037 Lrp/AsnC ligand binding domain DIE29_RS03435 PF01702 Queuine tRNA-ribosyltransferase DIE29_RS03440 PF02547 Queuosine biosynthesis protein DIE29_RS03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS03450 PF03466 LysR substrate binding domain DIE29_RS03460 PF01027 Inhibitor of apoptosis-promoting Bax1 DIE29_RS03465 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DIE29_RS03470 PF01171 PP-loop family DIE29_RS03470 PF09179 TilS substrate binding domain DIE29_RS03470 PF11734 TilS substrate C-terminal domain DIE29_RS03475 PF00072 Response regulator receiver domain DIE29_RS03475 PF00196 Bacterial regulatory proteins, luxR family DIE29_RS03480 PF00989 PAS fold DIE29_RS03480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS03480 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS03485 PF00334 Nucleoside diphosphate kinase DIE29_RS03490 PF04055 Radical SAM superfamily DIE29_RS03505 PF04551 GcpE protein DIE29_RS03510 PF03129 Anticodon binding domain DIE29_RS03510 PF13393 Histidyl-tRNA synthetase DIE29_RS03520 PF13360 PQQ-like domain DIE29_RS03525 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DIE29_RS03525 PF01926 50S ribosome-binding GTPase DIE29_RS03530 PF17209 Hfq protein DIE29_RS03535 PF16360 GTP-binding GTPase Middle Region DIE29_RS03535 PF01926 50S ribosome-binding GTPase DIE29_RS03535 PF13167 GTP-binding GTPase N-terminal DIE29_RS03540 PF01145 SPFH domain / Band 7 family DIE29_RS03540 PF12221 Bacterial membrane protein N terminal DIE29_RS03545 PF01145 SPFH domain / Band 7 family DIE29_RS03555 PF13393 Histidyl-tRNA synthetase DIE29_RS03560 PF00709 Adenylosuccinate synthetase DIE29_RS03575 PF00773 RNB domain DIE29_RS03575 PF00575 S1 RNA binding domain DIE29_RS03575 PF17876 Cold shock domain DIE29_RS03575 PF08206 Ribonuclease B OB domain DIE29_RS03575 PF08461 Ribonuclease R winged-helix domain DIE29_RS03580 PF08032 RNA 2'-O ribose methyltransferase substrate binding DIE29_RS03580 PF00588 SpoU rRNA Methylase family DIE29_RS03585 PF08376 Nitrate and nitrite sensing DIE29_RS03585 PF03861 ANTAR domain DIE29_RS03590 PF00005 ABC transporter DIE29_RS03595 PF00528 Binding-protein-dependent transport system inner membrane component DIE29_RS03600 PF00005 ABC transporter DIE29_RS03605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DIE29_RS03610 PF07992 Pyridine nucleotide-disulphide oxidoreductase DIE29_RS03610 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DIE29_RS03610 PF04324 BFD-like [2Fe-2S] binding domain DIE29_RS03610 PF18267 Rubredoxin NAD+ reductase C-terminal domain DIE29_RS03610 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DIE29_RS03620 PF01568 Molydopterin dinucleotide binding domain DIE29_RS03620 PF00384 Molybdopterin oxidoreductase DIE29_RS03620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DIE29_RS03625 PF03466 LysR substrate binding domain DIE29_RS03625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS03640 PF00881 Nitroreductase family DIE29_RS03650 PF02535 ZIP Zinc transporter DIE29_RS03660 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DIE29_RS03660 PF12170 DNA polymerase III tau subunit V interacting with alpha DIE29_RS03660 PF12169 DNA polymerase III subunits gamma and tau domain III DIE29_RS03665 PF02575 YbaB/EbfC DNA-binding family DIE29_RS03670 PF02132 RecR protein DIE29_RS03670 PF13662 Toprim domain DIE29_RS03675 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DIE29_RS03675 PF00355 Rieske [2Fe-2S] domain DIE29_RS03680 PF00032 Cytochrome b(C-terminal)/b6/petD DIE29_RS03680 PF00033 Cytochrome b/b6/petB DIE29_RS03685 PF02167 Cytochrome C1 family DIE29_RS03690 PF02798 Glutathione S-transferase, N-terminal domain DIE29_RS03690 PF00043 Glutathione S-transferase, C-terminal domain DIE29_RS03695 PF04386 Stringent starvation protein B DIE29_RS03700 PF00534 Glycosyl transferases group 1 DIE29_RS03700 PF13439 Glycosyltransferase Family 4 DIE29_RS03705 PF01814 Hemerythrin HHE cation binding domain DIE29_RS03715 PF01266 FAD dependent oxidoreductase DIE29_RS03720 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DIE29_RS03730 PF03975 CheD chemotactic sensory transduction DIE29_RS03735 PF00166 Chaperonin 10 Kd subunit DIE29_RS03740 PF00118 TCP-1/cpn60 chaperonin family DIE29_RS03745 PF00486 Transcriptional regulatory protein, C terminal DIE29_RS03745 PF00072 Response regulator receiver domain DIE29_RS03750 PF08521 Two-component sensor kinase N-terminal DIE29_RS03750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS03750 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS03755 PF00571 CBS domain DIE29_RS03760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DIE29_RS03760 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DIE29_RS03775 PF00005 ABC transporter DIE29_RS03785 PF01037 Lrp/AsnC ligand binding domain DIE29_RS03790 PF01464 Transglycosylase SLT domain DIE29_RS03790 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DIE29_RS03795 PF03129 Anticodon binding domain DIE29_RS03795 PF04073 Aminoacyl-tRNA editing domain DIE29_RS03795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DIE29_RS03800 PF00293 NUDIX domain DIE29_RS03805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DIE29_RS03805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DIE29_RS03815 PF00209 Sodium:neurotransmitter symporter family DIE29_RS03820 PF01037 Lrp/AsnC ligand binding domain DIE29_RS03825 PF00005 ABC transporter DIE29_RS03830 PF03649 Uncharacterised protein family (UPF0014) DIE29_RS03835 PF00171 Aldehyde dehydrogenase family DIE29_RS03840 PF03480 Bacterial extracellular solute-binding protein, family 7 DIE29_RS03845 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DIE29_RS03850 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DIE29_RS03855 PF00817 impB/mucB/samB family DIE29_RS03855 PF11798 IMS family HHH motif DIE29_RS03860 PF07556 Protein of unknown function (DUF1538) DIE29_RS03875 PF01923 Cobalamin adenosyltransferase DIE29_RS03880 PF02272 DHHA1 domain DIE29_RS03880 PF01411 tRNA synthetases class II (A) DIE29_RS03880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DIE29_RS03885 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS03885 PF00072 Response regulator receiver domain DIE29_RS03890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DIE29_RS03890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DIE29_RS03890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DIE29_RS03890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DIE29_RS03895 PF00561 alpha/beta hydrolase fold DIE29_RS03910 PF01063 Amino-transferase class IV DIE29_RS03915 PF05552 Conserved TM helix DIE29_RS03915 PF00924 Mechanosensitive ion channel DIE29_RS03920 PF00293 NUDIX domain DIE29_RS03950 PF01928 CYTH domain DIE29_RS03955 PF03710 Glutamate-ammonia ligase adenylyltransferase DIE29_RS03955 PF08335 GlnD PII-uridylyltransferase DIE29_RS03960 PF13116 Protein of unknown function DIE29_RS03960 PF13502 AsmA-like C-terminal region DIE29_RS03965 PF00795 Carbon-nitrogen hydrolase DIE29_RS03970 PF01523 Putative modulator of DNA gyrase DIE29_RS03975 PF00440 Bacterial regulatory proteins, tetR family DIE29_RS03985 PF00873 AcrB/AcrD/AcrF family DIE29_RS03990 PF00672 HAMP domain DIE29_RS03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS03990 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS03995 PF00072 Response regulator receiver domain DIE29_RS03995 PF00486 Transcriptional regulatory protein, C terminal DIE29_RS04005 PF00463 Isocitrate lyase family DIE29_RS04010 PF03737 Aldolase/RraA DIE29_RS04015 PF17871 AAA lid domain DIE29_RS04015 PF02861 Clp amino terminal domain, pathogenicity island component DIE29_RS04015 PF10431 C-terminal, D2-small domain, of ClpB protein DIE29_RS04015 PF07724 AAA domain (Cdc48 subfamily) DIE29_RS04015 PF00004 ATPase family associated with various cellular activities (AAA) DIE29_RS04020 PF02617 ATP-dependent Clp protease adaptor protein ClpS DIE29_RS04025 PF00313 'Cold-shock' DNA-binding domain DIE29_RS04030 PF00471 Ribosomal protein L33 DIE29_RS04035 PF00830 Ribosomal L28 family DIE29_RS04040 PF04002 RadC-like JAB domain DIE29_RS04045 PF02441 Flavoprotein DIE29_RS04045 PF04127 DNA / pantothenate metabolism flavoprotein DIE29_RS04050 PF00692 dUTPase DIE29_RS04060 PF07992 Pyridine nucleotide-disulphide oxidoreductase DIE29_RS04060 PF10518 TAT (twin-arginine translocation) pathway signal sequence DIE29_RS04060 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding DIE29_RS04080 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DIE29_RS04085 PF00180 Isocitrate/isopropylmalate dehydrogenase DIE29_RS04090 PF00582 Universal stress protein family DIE29_RS04100 PF00474 Sodium:solute symporter family DIE29_RS04115 PF00679 Elongation factor G C-terminus DIE29_RS04115 PF03764 Elongation factor G, domain IV DIE29_RS04115 PF00009 Elongation factor Tu GTP binding domain DIE29_RS04115 PF14492 Elongation Factor G, domain II DIE29_RS04130 PF13488 Glycine zipper DIE29_RS04130 PF00691 OmpA family DIE29_RS04135 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS04150 PF01116 Fructose-bisphosphate aldolase class-II DIE29_RS04155 PF00224 Pyruvate kinase, barrel domain DIE29_RS04155 PF02887 Pyruvate kinase, alpha/beta domain DIE29_RS04170 PF00162 Phosphoglycerate kinase DIE29_RS04175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DIE29_RS04175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DIE29_RS04180 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DIE29_RS04180 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DIE29_RS04185 PF00456 Transketolase, thiamine diphosphate binding domain DIE29_RS04185 PF02779 Transketolase, pyrimidine binding domain DIE29_RS04185 PF02780 Transketolase, C-terminal domain DIE29_RS04190 PF00485 Phosphoribulokinase / Uridine kinase family DIE29_RS04200 PF00459 Inositol monophosphatase family DIE29_RS04205 PF04452 RNA methyltransferase DIE29_RS04210 PF03976 Polyphosphate kinase 2 (PPK2) DIE29_RS04215 PF00583 Acetyltransferase (GNAT) family DIE29_RS04215 PF00696 Amino acid kinase family DIE29_RS04220 PF00563 EAL domain DIE29_RS04220 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS04220 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS04225 PF04362 Bacterial Fe(2+) trafficking DIE29_RS04230 PF01895 PhoU domain DIE29_RS04235 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DIE29_RS04240 PF04305 Protein of unknown function (DUF455) DIE29_RS04245 PF01578 Cytochrome C assembly protein DIE29_RS04250 PF05140 ResB-like family DIE29_RS04255 PF00034 Cytochrome c DIE29_RS04260 PF01926 50S ribosome-binding GTPase DIE29_RS04265 PF00490 Delta-aminolevulinic acid dehydratase DIE29_RS04280 PF08241 Methyltransferase domain DIE29_RS04285 PF06968 Biotin and Thiamin Synthesis associated domain DIE29_RS04285 PF04055 Radical SAM superfamily DIE29_RS04290 PF00156 Phosphoribosyl transferase domain DIE29_RS04295 PF00588 SpoU rRNA Methylase family DIE29_RS04300 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DIE29_RS04300 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DIE29_RS04310 PF02556 Preprotein translocase subunit SecB DIE29_RS04315 PF00462 Glutaredoxin DIE29_RS04320 PF00581 Rhodanese-like domain DIE29_RS04330 PF01551 Peptidase family M23 DIE29_RS04335 PF13180 PDZ domain DIE29_RS04335 PF03572 Peptidase family S41 DIE29_RS04345 PF00899 ThiF family DIE29_RS04350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DIE29_RS04350 PF01872 RibD C-terminal domain DIE29_RS04355 PF03477 ATP cone domain DIE29_RS04360 PF00464 Serine hydroxymethyltransferase DIE29_RS04365 PF00300 Histidine phosphatase superfamily (branch 1) DIE29_RS04370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DIE29_RS04380 PF03480 Bacterial extracellular solute-binding protein, family 7 DIE29_RS04385 PF01523 Putative modulator of DNA gyrase DIE29_RS04390 PF04751 Protein of unknown function (DUF615) DIE29_RS04395 PF00994 Probable molybdopterin binding domain DIE29_RS04400 PF01794 Ferric reductase like transmembrane component DIE29_RS04405 PF00174 Oxidoreductase molybdopterin binding domain DIE29_RS04410 PF00793 DAHP synthetase I family DIE29_RS04415 PF01966 HD domain DIE29_RS04420 PF00849 RNA pseudouridylate synthase DIE29_RS04430 PF01312 FlhB HrpN YscU SpaS Family DIE29_RS04435 PF00771 FHIPEP family DIE29_RS04440 PF00563 EAL domain DIE29_RS04440 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS04440 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS04445 PF00448 SRP54-type protein, GTPase domain DIE29_RS04455 PF04542 Sigma-70 region 2 DIE29_RS04455 PF04539 Sigma-70 region 3 DIE29_RS04455 PF04545 Sigma-70, region 4 DIE29_RS04460 PF01618 MotA/TolQ/ExbB proton channel family DIE29_RS04465 PF00691 OmpA family DIE29_RS04465 PF13677 Membrane MotB of proton-channel complex MotA/MotB DIE29_RS04475 PF03232 Ubiquinone biosynthesis protein COQ7 DIE29_RS04480 PF02566 OsmC-like protein DIE29_RS04485 PF00572 Ribosomal protein L13 DIE29_RS04490 PF00380 Ribosomal protein S9/S16 DIE29_RS04495 PF01118 Semialdehyde dehydrogenase, NAD binding domain DIE29_RS04495 PF02774 Semialdehyde dehydrogenase, dimerisation domain DIE29_RS04500 PF01521 Iron-sulphur cluster biosynthesis DIE29_RS04505 PF01551 Peptidase family M23 DIE29_RS04505 PF08525 Opacity-associated protein A N-terminal motif DIE29_RS04505 PF01476 LysM domain DIE29_RS04510 PF01479 S4 domain DIE29_RS04510 PF00579 tRNA synthetases class I (W and Y) DIE29_RS04550 PF01695 IstB-like ATP binding protein DIE29_RS04570 PF10548 P22AR C-terminal domain DIE29_RS04570 PF02498 BRO family, N-terminal domain DIE29_RS04585 PF12728 Helix-turn-helix domain DIE29_RS04610 PF00239 Resolvase, N terminal domain DIE29_RS04610 PF02796 Helix-turn-helix domain of resolvase DIE29_RS04635 PF04945 YHS domain DIE29_RS04655 PF05275 Copper resistance protein B precursor (CopB) DIE29_RS04660 PF07731 Multicopper oxidase DIE29_RS04660 PF00394 Multicopper oxidase DIE29_RS04660 PF07732 Multicopper oxidase DIE29_RS04665 PF00072 Response regulator receiver domain DIE29_RS04665 PF00486 Transcriptional regulatory protein, C terminal DIE29_RS04670 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS04670 PF00672 HAMP domain DIE29_RS04670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS04675 PF00563 EAL domain DIE29_RS04675 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS04675 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS04685 PF13411 MerR HTH family regulatory protein DIE29_RS04700 PF01389 OmpA-like transmembrane domain DIE29_RS04700 PF00691 OmpA family DIE29_RS04705 PF01979 Amidohydrolase family DIE29_RS04710 PF00521 DNA gyrase/topoisomerase IV, subunit A DIE29_RS04710 PF03989 DNA gyrase C-terminal domain, beta-propeller DIE29_RS04715 PF00266 Aminotransferase class-V DIE29_RS04720 PF00800 Prephenate dehydratase DIE29_RS04720 PF01842 ACT domain DIE29_RS04720 PF01817 Chorismate mutase type II DIE29_RS04725 PF00155 Aminotransferase class I and II DIE29_RS04730 PF02153 Prephenate dehydrogenase DIE29_RS04730 PF01842 ACT domain DIE29_RS04735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DIE29_RS04740 PF00575 S1 RNA binding domain DIE29_RS04745 PF00216 Bacterial DNA-binding protein DIE29_RS04755 PF18073 Rubredoxin metal binding domain DIE29_RS04760 PF00291 Pyridoxal-phosphate dependent enzyme DIE29_RS04790 PF03129 Anticodon binding domain DIE29_RS04790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DIE29_RS04790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DIE29_RS04790 PF02824 TGS domain DIE29_RS04795 PF05198 Translation initiation factor IF-3, N-terminal domain DIE29_RS04795 PF00707 Translation initiation factor IF-3, C-terminal domain DIE29_RS04800 PF01632 Ribosomal protein L35 DIE29_RS04805 PF00453 Ribosomal protein L20 DIE29_RS04810 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DIE29_RS04810 PF01409 tRNA synthetases class II core domain (F) DIE29_RS04815 PF03483 B3/4 domain DIE29_RS04815 PF01588 Putative tRNA binding domain DIE29_RS04815 PF03147 Ferredoxin-fold anticodon binding domain DIE29_RS04815 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DIE29_RS04815 PF03484 tRNA synthetase B5 domain DIE29_RS04820 PF00216 Bacterial DNA-binding protein DIE29_RS04835 PF01975 Survival protein SurE DIE29_RS04845 PF01476 LysM domain DIE29_RS04845 PF01551 Peptidase family M23 DIE29_RS04850 PF00140 Sigma-70 factor, region 1.2 DIE29_RS04850 PF04542 Sigma-70 region 2 DIE29_RS04850 PF04539 Sigma-70 region 3 DIE29_RS04850 PF04545 Sigma-70, region 4 DIE29_RS04855 PF13406 Transglycosylase SLT domain DIE29_RS04860 PF13559 Domain of unknown function (DUF4129) DIE29_RS04860 PF01841 Transglutaminase-like superfamily DIE29_RS04860 PF11992 Domain of unknown function (DUF3488) DIE29_RS04870 PF07726 ATPase family associated with various cellular activities (AAA) DIE29_RS04870 PF17863 AAA lid domain DIE29_RS04875 PF00850 Histone deacetylase domain DIE29_RS04880 PF00701 Dihydrodipicolinate synthetase family DIE29_RS04885 PF06804 NlpB/DapX lipoprotein DIE29_RS04895 PF08007 Cupin superfamily protein DIE29_RS04900 PF05958 tRNA (Uracil-5-)-methyltransferase DIE29_RS04900 PF01938 TRAM domain DIE29_RS04910 PF00521 DNA gyrase/topoisomerase IV, subunit A DIE29_RS04920 PF00204 DNA gyrase B DIE29_RS04920 PF00986 DNA gyrase B subunit, carboxyl terminus DIE29_RS04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS04920 PF01751 Toprim domain DIE29_RS04935 PF17656 FlgA N-terminal domain DIE29_RS04935 PF13144 Chaperone for flagella basal body P-ring formation DIE29_RS04940 PF00460 Flagella basal body rod protein DIE29_RS04945 PF00460 Flagella basal body rod protein DIE29_RS04945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DIE29_RS04950 PF13861 FlgD Tudor-like domain DIE29_RS04950 PF13860 FlgD Ig-like domain DIE29_RS04950 PF03963 Flagellar hook capping protein - N-terminal region DIE29_RS04955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DIE29_RS04955 PF00460 Flagella basal body rod protein DIE29_RS04955 PF07559 Flagellar basal body protein FlaE DIE29_RS04960 PF00460 Flagella basal body rod protein DIE29_RS04960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DIE29_RS04965 PF00460 Flagella basal body rod protein DIE29_RS04965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DIE29_RS04970 PF02107 Flagellar L-ring protein DIE29_RS04975 PF02119 Flagellar P-ring protein DIE29_RS04980 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DIE29_RS04980 PF10135 Rod binding protein DIE29_RS04985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DIE29_RS04985 PF00460 Flagella basal body rod protein DIE29_RS04990 PF00669 Bacterial flagellin N-terminal helical region DIE29_RS04990 PF00669 Bacterial flagellin N-terminal helical region DIE29_RS05000 PF01311 Bacterial export proteins, family 1 DIE29_RS05005 PF01313 Bacterial export proteins, family 3 DIE29_RS05010 PF00813 FliP family DIE29_RS05015 PF04347 Flagellar biosynthesis protein, FliO DIE29_RS05020 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DIE29_RS05020 PF16973 Flagellar motor switch protein FliN N-terminal DIE29_RS05025 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DIE29_RS05025 PF02154 Flagellar motor switch protein FliM DIE29_RS05045 PF18269 T3SS EscN ATPase C-terminal domain DIE29_RS05045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DIE29_RS05055 PF01706 FliG C-terminal domain DIE29_RS05055 PF14841 FliG middle domain DIE29_RS05055 PF14842 FliG N-terminal domain DIE29_RS05060 PF08345 Flagellar M-ring protein C-terminal DIE29_RS05060 PF01514 Secretory protein of YscJ/FliF family DIE29_RS05065 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS05065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS05065 PF13188 PAS domain DIE29_RS05070 PF02954 Bacterial regulatory protein, Fis family DIE29_RS05070 PF00072 Response regulator receiver domain DIE29_RS05070 PF00158 Sigma-54 interaction domain DIE29_RS05075 PF02049 Flagellar hook-basal body complex protein FliE DIE29_RS05090 PF00005 ABC transporter DIE29_RS05105 PF01475 Ferric uptake regulator family DIE29_RS05110 PF07317 Flagellar regulator YcgR DIE29_RS05110 PF07238 PilZ domain DIE29_RS05115 PF01312 FlhB HrpN YscU SpaS Family DIE29_RS05130 PF02561 Flagellar protein FliS DIE29_RS05135 PF02465 Flagellar hook-associated protein 2 N-terminus DIE29_RS05135 PF07195 Flagellar hook-associated protein 2 C-terminus DIE29_RS05145 PF00669 Bacterial flagellin N-terminal helical region DIE29_RS05145 PF00700 Bacterial flagellin C-terminal helical region DIE29_RS05150 PF00535 Glycosyl transferase family 2 DIE29_RS05150 PF00534 Glycosyl transferases group 1 DIE29_RS05155 PF00669 Bacterial flagellin N-terminal helical region DIE29_RS05155 PF00700 Bacterial flagellin C-terminal helical region DIE29_RS05160 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS05165 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS05170 PF00196 Bacterial regulatory proteins, luxR family DIE29_RS05170 PF00072 Response regulator receiver domain DIE29_RS05175 PF07730 Histidine kinase DIE29_RS05175 PF17200 Single Cache domain 2 DIE29_RS05185 PF07690 Major Facilitator Superfamily DIE29_RS05190 PF17516 ProQ C-terminal domain DIE29_RS05190 PF04352 ProQ/FINO family DIE29_RS05195 PF01266 FAD dependent oxidoreductase DIE29_RS05200 PF01037 Lrp/AsnC ligand binding domain DIE29_RS05215 PF12631 MnmE helical domain DIE29_RS05215 PF10396 GTP-binding protein TrmE N-terminus DIE29_RS05215 PF01926 50S ribosome-binding GTPase DIE29_RS05220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DIE29_RS05225 PF09335 SNARE associated Golgi protein DIE29_RS05235 PF07729 FCD domain DIE29_RS05235 PF00392 Bacterial regulatory proteins, gntR family DIE29_RS05245 PF08402 TOBE domain DIE29_RS05245 PF00005 ABC transporter DIE29_RS05255 PF00266 Aminotransferase class-V DIE29_RS05260 PF13419 Haloacid dehalogenase-like hydrolase DIE29_RS05265 PF00672 HAMP domain DIE29_RS05265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS05265 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS05265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DIE29_RS05265 PF01627 Hpt domain DIE29_RS05265 PF00072 Response regulator receiver domain DIE29_RS05270 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS05270 PF01627 Hpt domain DIE29_RS05270 PF00989 PAS fold DIE29_RS05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS05270 PF00497 Bacterial extracellular solute-binding proteins, family 3 DIE29_RS05270 PF00072 Response regulator receiver domain DIE29_RS05280 PF03466 LysR substrate binding domain DIE29_RS05280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS05285 PF06779 Uncharacterised MFS-type transporter YbfB DIE29_RS05290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DIE29_RS05290 PF10414 Sirohaem synthase dimerisation region DIE29_RS05290 PF14824 Sirohaem biosynthesis protein central DIE29_RS05295 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DIE29_RS05300 PF03264 NapC/NirT cytochrome c family, N-terminal region DIE29_RS05305 PF09459 Ethylbenzene dehydrogenase DIE29_RS05320 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DIE29_RS05330 PF13404 AsnC-type helix-turn-helix domain DIE29_RS05330 PF17805 AsnC-like ligand binding domain DIE29_RS05335 PF13404 AsnC-type helix-turn-helix domain DIE29_RS05335 PF17805 AsnC-like ligand binding domain DIE29_RS05340 PF17805 AsnC-like ligand binding domain DIE29_RS05340 PF13404 AsnC-type helix-turn-helix domain DIE29_RS05345 PF13186 Iron-sulfur cluster-binding domain DIE29_RS05345 PF04055 Radical SAM superfamily DIE29_RS05355 PF00325 Bacterial regulatory proteins, crp family DIE29_RS05355 PF00027 Cyclic nucleotide-binding domain DIE29_RS05375 PF07728 AAA domain (dynein-related subfamily) DIE29_RS05375 PF08406 CbbQ/NirQ/NorQ C-terminal DIE29_RS05385 PF00510 Cytochrome c oxidase subunit III DIE29_RS05390 PF00115 Cytochrome C and Quinol oxidase polypeptide I DIE29_RS05395 PF00034 Cytochrome c DIE29_RS05400 PF00465 Iron-containing alcohol dehydrogenase DIE29_RS05420 PF01594 AI-2E family transporter DIE29_RS05425 PF01595 Cyclin M transmembrane N-terminal domain DIE29_RS05425 PF00571 CBS domain DIE29_RS05425 PF03471 Transporter associated domain DIE29_RS05430 PF03741 Integral membrane protein TerC family DIE29_RS05445 PF16177 Acetyl-coenzyme A synthetase N-terminus DIE29_RS05445 PF00501 AMP-binding enzyme DIE29_RS05445 PF13193 AMP-binding enzyme C-terminal domain DIE29_RS05455 PF00672 HAMP domain DIE29_RS05455 PF18698 Histidine kinase sensor domain DIE29_RS05455 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS05455 PF00989 PAS fold DIE29_RS05455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS05460 PF00486 Transcriptional regulatory protein, C terminal DIE29_RS05460 PF00072 Response regulator receiver domain DIE29_RS05465 PF00929 Exonuclease DIE29_RS05470 PF00474 Sodium:solute symporter family DIE29_RS05480 PF00141 Peroxidase DIE29_RS05490 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS05495 PF09345 Domain of unknown function (DUF1987) DIE29_RS05510 PF02666 Phosphatidylserine decarboxylase DIE29_RS05520 PF00085 Thioredoxin DIE29_RS05525 PF13533 Biotin-lipoyl like DIE29_RS05530 PF00005 ABC transporter DIE29_RS05555 PF09335 SNARE associated Golgi protein DIE29_RS05565 PF08676 MutL C terminal dimerisation domain DIE29_RS05565 PF01119 DNA mismatch repair protein, C-terminal domain DIE29_RS05570 PF00551 Formyl transferase DIE29_RS05580 PF01029 NusB family DIE29_RS05580 PF01189 16S rRNA methyltransferase RsmB/F DIE29_RS05600 PF00355 Rieske [2Fe-2S] domain DIE29_RS05600 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DIE29_RS05605 PF00158 Sigma-54 interaction domain DIE29_RS05605 PF00072 Response regulator receiver domain DIE29_RS05605 PF02954 Bacterial regulatory protein, Fis family DIE29_RS05615 PF01654 Cytochrome bd terminal oxidase subunit I DIE29_RS05620 PF02322 Cytochrome bd terminal oxidase subunit II DIE29_RS05630 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) DIE29_RS05640 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding DIE29_RS05640 PF07992 Pyridine nucleotide-disulphide oxidoreductase DIE29_RS05640 PF10518 TAT (twin-arginine translocation) pathway signal sequence DIE29_RS05650 PF01242 6-pyruvoyl tetrahydropterin synthase DIE29_RS05665 PF00696 Amino acid kinase family DIE29_RS05665 PF01842 ACT domain DIE29_RS05665 PF13840 ACT domain DIE29_RS05710 PF13808 DDE_Tnp_1-associated DIE29_RS05710 PF01609 Transposase DDE domain DIE29_RS05725 PF01609 Transposase DDE domain DIE29_RS05725 PF13808 DDE_Tnp_1-associated DIE29_RS05740 PF01609 Transposase DDE domain DIE29_RS05740 PF13808 DDE_Tnp_1-associated DIE29_RS05745 PF01609 Transposase DDE domain DIE29_RS05745 PF13808 DDE_Tnp_1-associated DIE29_RS05760 PF13495 Phage integrase, N-terminal SAM-like domain DIE29_RS05760 PF00589 Phage integrase family DIE29_RS05765 PF00111 2Fe-2S iron-sulfur cluster binding domain DIE29_RS05765 PF00970 Oxidoreductase FAD-binding domain DIE29_RS05765 PF00175 Oxidoreductase NAD-binding domain DIE29_RS05775 PF03186 CobD/Cbib protein DIE29_RS05775 PF17113 Regulatory signalling modulator protein AmpE DIE29_RS05780 PF00108 Thiolase, N-terminal domain DIE29_RS05780 PF02803 Thiolase, C-terminal domain DIE29_RS05785 PF14403 Circularly permuted ATP-grasp type 2 DIE29_RS05790 PF04168 A predicted alpha-helical domain with a conserved ER motif. DIE29_RS05790 PF14403 Circularly permuted ATP-grasp type 2 DIE29_RS05795 PF03193 RsgA GTPase DIE29_RS05800 PF01435 Peptidase family M48 DIE29_RS05800 PF16491 CAAX prenyl protease N-terminal, five membrane helices DIE29_RS05805 PF00929 Exonuclease DIE29_RS05810 PF00342 Phosphoglucose isomerase DIE29_RS05820 PF01197 Ribosomal protein L31 DIE29_RS05825 PF00654 Voltage gated chloride channel DIE29_RS05835 PF01613 Flavin reductase like domain DIE29_RS05835 PF00258 Flavodoxin DIE29_RS05840 PF01966 HD domain DIE29_RS05840 PF11871 Domain of unknown function (DUF3391) DIE29_RS05850 PF01434 Peptidase family M41 DIE29_RS05850 PF17862 AAA+ lid domain DIE29_RS05850 PF00004 ATPase family associated with various cellular activities (AAA) DIE29_RS05855 PF01169 Uncharacterized protein family UPF0016 DIE29_RS05860 PF00034 Cytochrome c DIE29_RS05865 PF00034 Cytochrome c DIE29_RS05870 PF01435 Peptidase family M48 DIE29_RS05875 PF04011 LemA family DIE29_RS05890 PF10576 Iron-sulfur binding domain of endonuclease III DIE29_RS05890 PF00633 Helix-hairpin-helix motif DIE29_RS05890 PF00730 HhH-GPD superfamily base excision DNA repair protein DIE29_RS05895 PF02508 Rnf-Nqr subunit, membrane protein DIE29_RS05900 PF04205 FMN-binding domain DIE29_RS05905 PF03116 NQR2, RnfD, RnfE family DIE29_RS05910 PF13237 4Fe-4S dicluster domain DIE29_RS05910 PF13375 RnfC Barrel sandwich hybrid domain DIE29_RS05910 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DIE29_RS05910 PF10531 SLBB domain DIE29_RS05915 PF04060 Putative Fe-S cluster DIE29_RS05920 PF02508 Rnf-Nqr subunit, membrane protein DIE29_RS05925 PF01180 Dihydroorotate dehydrogenase DIE29_RS05930 PF04377 Arginine-tRNA-protein transferase, C terminus DIE29_RS05930 PF04376 Arginine-tRNA-protein transferase, N terminus DIE29_RS05935 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DIE29_RS05940 PF00005 ABC transporter DIE29_RS05940 PF08402 TOBE domain DIE29_RS05945 PF00528 Binding-protein-dependent transport system inner membrane component DIE29_RS05950 PF03150 Di-haem cytochrome c peroxidase DIE29_RS05950 PF00034 Cytochrome c DIE29_RS05965 PF01594 AI-2E family transporter DIE29_RS05970 PF02769 AIR synthase related protein, C-terminal domain DIE29_RS05970 PF00586 AIR synthase related protein, N-terminal domain DIE29_RS05975 PF00529 HlyD membrane-fusion protein of T1SS DIE29_RS05975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DIE29_RS05980 PF00873 AcrB/AcrD/AcrF family DIE29_RS06000 PF09827 CRISPR associated protein Cas2 DIE29_RS06010 PF01867 CRISPR associated protein Cas1 DIE29_RS06015 PF09827 CRISPR associated protein Cas2 DIE29_RS06080 PF00005 ABC transporter DIE29_RS06085 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS06090 PF01774 UreD urease accessory protein DIE29_RS06095 PF00547 Urease, gamma subunit DIE29_RS06100 PF00699 Urease beta subunit DIE29_RS06105 PF01979 Amidohydrolase family DIE29_RS06105 PF00449 Urease alpha-subunit, N-terminal domain DIE29_RS06110 PF05194 UreE urease accessory protein, C-terminal domain DIE29_RS06110 PF02814 UreE urease accessory protein, N-terminal domain DIE29_RS06115 PF01730 UreF DIE29_RS06120 PF02492 CobW/HypB/UreG, nucleotide-binding domain DIE29_RS06125 PF04955 HupE / UreJ protein DIE29_RS06130 PF02386 Cation transport protein DIE29_RS06135 PF00486 Transcriptional regulatory protein, C terminal DIE29_RS06135 PF00072 Response regulator receiver domain DIE29_RS06140 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS06140 PF13492 GAF domain DIE29_RS06140 PF13493 Domain of unknown function (DUF4118) DIE29_RS06140 PF02702 Osmosensitive K+ channel His kinase sensor domain DIE29_RS06140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS06165 PF01734 Patatin-like phospholipase DIE29_RS06170 PF03061 Thioesterase superfamily DIE29_RS06180 PF03477 ATP cone domain DIE29_RS06180 PF02867 Ribonucleotide reductase, barrel domain DIE29_RS06180 PF00317 Ribonucleotide reductase, all-alpha domain DIE29_RS06185 PF00268 Ribonucleotide reductase, small chain DIE29_RS06205 PF01967 MoaC family DIE29_RS06210 PF01435 Peptidase family M48 DIE29_RS06215 PF01206 Sulfurtransferase TusA DIE29_RS06235 PF01810 LysE type translocator DIE29_RS06245 PF08264 Anticodon-binding domain of tRNA DIE29_RS06245 PF10458 Valyl tRNA synthetase tRNA binding arm DIE29_RS06245 PF00133 tRNA synthetases class I (I, L, M and V) DIE29_RS06260 PF02789 Cytosol aminopeptidase family, N-terminal domain DIE29_RS06260 PF00883 Cytosol aminopeptidase family, catalytic domain DIE29_RS06265 PF03739 Lipopolysaccharide export system permease LptF/LptG DIE29_RS06275 PF01245 Ribosomal protein L19 DIE29_RS06280 PF01746 tRNA (Guanine-1)-methyltransferase DIE29_RS06285 PF05239 PRC-barrel domain DIE29_RS06285 PF01782 RimM N-terminal domain DIE29_RS06290 PF00886 Ribosomal protein S16 DIE29_RS06300 PF03631 Virulence factor BrkB DIE29_RS06305 PF12697 Alpha/beta hydrolase family DIE29_RS06320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DIE29_RS06325 PF00528 Binding-protein-dependent transport system inner membrane component DIE29_RS06330 PF00528 Binding-protein-dependent transport system inner membrane component DIE29_RS06330 PF12911 N-terminal TM domain of oligopeptide transport permease C DIE29_RS06335 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DIE29_RS06340 PF00994 Probable molybdopterin binding domain DIE29_RS06340 PF03454 MoeA C-terminal region (domain IV) DIE29_RS06340 PF03453 MoeA N-terminal region (domain I and II) DIE29_RS06345 PF02597 ThiS family DIE29_RS06350 PF02391 MoaE protein DIE29_RS06360 PF00004 ATPase family associated with various cellular activities (AAA) DIE29_RS06360 PF02861 Clp amino terminal domain, pathogenicity island component DIE29_RS06360 PF10431 C-terminal, D2-small domain, of ClpB protein DIE29_RS06360 PF17871 AAA lid domain DIE29_RS06360 PF07724 AAA domain (Cdc48 subfamily) DIE29_RS06370 PF00593 TonB dependent receptor DIE29_RS06370 PF07715 TonB-dependent Receptor Plug Domain DIE29_RS06375 PF00561 alpha/beta hydrolase fold DIE29_RS06390 PF00005 ABC transporter DIE29_RS06395 PF00005 ABC transporter DIE29_RS06415 PF08042 PqqA family DIE29_RS06420 PF12706 Beta-lactamase superfamily domain DIE29_RS06425 PF03070 TENA/THI-4/PQQC family DIE29_RS06430 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DIE29_RS06435 PF13186 Iron-sulfur cluster-binding domain DIE29_RS06435 PF04055 Radical SAM superfamily DIE29_RS06440 PF00267 Gram-negative porin DIE29_RS06445 PF00196 Bacterial regulatory proteins, luxR family DIE29_RS06445 PF00072 Response regulator receiver domain DIE29_RS06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS06450 PF05231 MASE1 DIE29_RS06450 PF07730 Histidine kinase DIE29_RS06465 PF01011 PQQ enzyme repeat DIE29_RS06465 PF13360 PQQ-like domain DIE29_RS06470 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DIE29_RS06480 PF01011 PQQ enzyme repeat DIE29_RS06480 PF13360 PQQ-like domain DIE29_RS06485 PF07730 Histidine kinase DIE29_RS06485 PF05231 MASE1 DIE29_RS06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS06490 PF00072 Response regulator receiver domain DIE29_RS06490 PF00196 Bacterial regulatory proteins, luxR family DIE29_RS06505 PF01590 GAF domain DIE29_RS06505 PF02954 Bacterial regulatory protein, Fis family DIE29_RS06505 PF00158 Sigma-54 interaction domain DIE29_RS06510 PF00171 Aldehyde dehydrogenase family DIE29_RS06525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DIE29_RS06530 PF00158 Sigma-54 interaction domain DIE29_RS06530 PF02954 Bacterial regulatory protein, Fis family DIE29_RS06530 PF01590 GAF domain DIE29_RS06535 PF07995 Glucose / Sorbosone dehydrogenase DIE29_RS06550 PF00497 Bacterial extracellular solute-binding proteins, family 3 DIE29_RS06555 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS06555 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS06555 PF00563 EAL domain DIE29_RS06565 PF05987 Bacterial protein of unknown function (DUF898) DIE29_RS06570 PF01435 Peptidase family M48 DIE29_RS06575 PF12848 ABC transporter DIE29_RS06575 PF00005 ABC transporter DIE29_RS06580 PF08447 PAS fold DIE29_RS06580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS06580 PF08447 PAS fold DIE29_RS06580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS06585 PF00175 Oxidoreductase NAD-binding domain DIE29_RS06585 PF00970 Oxidoreductase FAD-binding domain DIE29_RS06590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS06590 PF03466 LysR substrate binding domain DIE29_RS06595 PF07238 PilZ domain DIE29_RS06595 PF03170 Bacterial cellulose synthase subunit DIE29_RS06595 PF00535 Glycosyl transferase family 2 DIE29_RS06615 PF02347 Glycine cleavage system P-protein DIE29_RS06620 PF01597 Glycine cleavage H-protein DIE29_RS06625 PF08669 Glycine cleavage T-protein C-terminal barrel domain DIE29_RS06625 PF01571 Aminomethyltransferase folate-binding domain DIE29_RS06635 PF00263 Bacterial type II and III secretion system protein DIE29_RS06635 PF03958 Bacterial type II/III secretion system short domain DIE29_RS06640 PF00437 Type II/IV secretion system protein DIE29_RS06645 PF00482 Type II secretion system (T2SS), protein F DIE29_RS06650 PF07963 Prokaryotic N-terminal methylation motif DIE29_RS06650 PF08334 Type II secretion system (T2SS), protein G DIE29_RS06655 PF07963 Prokaryotic N-terminal methylation motif DIE29_RS06660 PF07963 Prokaryotic N-terminal methylation motif DIE29_RS06660 PF02501 Type II secretion system (T2SS), protein I DIE29_RS06665 PF07963 Prokaryotic N-terminal methylation motif DIE29_RS06665 PF11612 Type II secretion system (T2SS), protein J DIE29_RS06690 PF02811 PHP domain DIE29_RS06695 PF01300 Telomere recombination DIE29_RS06700 PF02163 Peptidase family M50 DIE29_RS06705 PF00579 tRNA synthetases class I (W and Y) DIE29_RS06710 PF02616 Segregation and condensation protein ScpA DIE29_RS06715 PF04079 Segregation and condensation complex subunit ScpB DIE29_RS06720 PF01479 S4 domain DIE29_RS06720 PF00849 RNA pseudouridylate synthase DIE29_RS06740 PF06418 CTP synthase N-terminus DIE29_RS06740 PF00117 Glutamine amidotransferase class-I DIE29_RS06745 PF00793 DAHP synthetase I family DIE29_RS06750 PF00113 Enolase, C-terminal TIM barrel domain DIE29_RS06750 PF03952 Enolase, N-terminal domain DIE29_RS06755 PF04977 Septum formation initiator DIE29_RS06760 PF00571 CBS domain DIE29_RS06760 PF01380 SIS domain DIE29_RS06765 PF00877 NlpC/P60 family DIE29_RS06775 PF00132 Bacterial transferase hexapeptide (six repeats) DIE29_RS06780 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DIE29_RS06790 PF01384 Phosphate transporter family DIE29_RS06815 PF01593 Flavin containing amine oxidoreductase DIE29_RS06830 PF00005 ABC transporter DIE29_RS06835 PF02687 FtsX-like permease family DIE29_RS06835 PF12704 MacB-like periplasmic core domain DIE29_RS06850 PF03793 PASTA domain DIE29_RS06850 PF00069 Protein kinase domain DIE29_RS06855 PF03350 Uncharacterized protein family, UPF0114 DIE29_RS06860 PF01966 HD domain DIE29_RS06860 PF08335 GlnD PII-uridylyltransferase DIE29_RS06865 PF00557 Metallopeptidase family M24 DIE29_RS06870 PF00318 Ribosomal protein S2 DIE29_RS06875 PF00889 Elongation factor TS DIE29_RS06880 PF00696 Amino acid kinase family DIE29_RS06885 PF01765 Ribosome recycling factor DIE29_RS06890 PF01255 Putative undecaprenyl diphosphate synthase DIE29_RS06900 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DIE29_RS06900 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DIE29_RS06900 PF13288 DXP reductoisomerase C-terminal domain DIE29_RS06905 PF17820 PDZ domain DIE29_RS06905 PF13180 PDZ domain DIE29_RS06905 PF02163 Peptidase family M50 DIE29_RS06910 PF07244 Surface antigen variable number repeat DIE29_RS06910 PF01103 Surface antigen DIE29_RS06920 PF00132 Bacterial transferase hexapeptide (six repeats) DIE29_RS06920 PF14602 Hexapeptide repeat of succinyl-transferase DIE29_RS06920 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DIE29_RS06925 PF07977 FabA-like domain DIE29_RS06930 PF00132 Bacterial transferase hexapeptide (six repeats) DIE29_RS06930 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DIE29_RS06935 PF02684 Lipid-A-disaccharide synthetase DIE29_RS06940 PF01351 Ribonuclease HII DIE29_RS06950 PF00588 SpoU rRNA Methylase family DIE29_RS06950 PF08032 RNA 2'-O ribose methyltransferase substrate binding DIE29_RS06990 PF01053 Cys/Met metabolism PLP-dependent enzyme DIE29_RS07000 PF08448 PAS fold DIE29_RS07000 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS07000 PF00563 EAL domain DIE29_RS07010 PF03050 Transposase IS66 family DIE29_RS07010 PF13007 Transposase C of IS166 homeodomain DIE29_RS07010 PF13817 IS66 C-terminal element DIE29_RS07010 PF13005 zinc-finger binding domain of transposase IS66 DIE29_RS07030 PF04715 Anthranilate synthase component I, N terminal region DIE29_RS07030 PF00425 chorismate binding enzyme DIE29_RS07035 PF02811 PHP domain DIE29_RS07035 PF14579 Helix-hairpin-helix motif DIE29_RS07035 PF07733 Bacterial DNA polymerase III alpha NTPase domain DIE29_RS07035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DIE29_RS07040 PF13654 AAA domain DIE29_RS07040 PF05362 Lon protease (S16) C-terminal proteolytic domain DIE29_RS07045 PF17820 PDZ domain DIE29_RS07045 PF13180 PDZ domain DIE29_RS07065 PF01726 LexA DNA binding domain DIE29_RS07065 PF00717 Peptidase S24-like DIE29_RS07070 PF00578 AhpC/TSA family DIE29_RS07075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DIE29_RS07080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DIE29_RS07080 PF00005 ABC transporter DIE29_RS07085 PF01464 Transglycosylase SLT domain DIE29_RS07085 PF01476 LysM domain DIE29_RS07090 PF00563 EAL domain DIE29_RS07090 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS07090 PF00360 Phytochrome region DIE29_RS07090 PF01590 GAF domain DIE29_RS07095 PF00072 Response regulator receiver domain DIE29_RS07095 PF03861 ANTAR domain DIE29_RS07100 PF00753 Metallo-beta-lactamase superfamily DIE29_RS07100 PF16123 Hydroxyacylglutathione hydrolase C-terminus DIE29_RS07110 PF00075 RNase H DIE29_RS07115 PF00929 Exonuclease DIE29_RS07120 PF01266 FAD dependent oxidoreductase DIE29_RS07125 PF01743 Poly A polymerase head domain DIE29_RS07125 PF00571 CBS domain DIE29_RS07140 PF01624 MutS domain I DIE29_RS07140 PF05192 MutS domain III DIE29_RS07140 PF05188 MutS domain II DIE29_RS07140 PF05190 MutS family domain IV DIE29_RS07140 PF00488 MutS domain V DIE29_RS07145 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS07145 PF00563 EAL domain DIE29_RS07145 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS07160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DIE29_RS07160 PF00056 lactate/malate dehydrogenase, NAD binding domain DIE29_RS07165 PF00392 Bacterial regulatory proteins, gntR family DIE29_RS07165 PF07702 UTRA domain DIE29_RS07180 PF02910 Fumarate reductase flavoprotein C-term DIE29_RS07180 PF00890 FAD binding domain DIE29_RS07185 PF13085 2Fe-2S iron-sulfur cluster binding domain DIE29_RS07190 PF03937 Flavinator of succinate dehydrogenase DIE29_RS07195 PF00285 Citrate synthase, C-terminal domain DIE29_RS07200 PF00676 Dehydrogenase E1 component DIE29_RS07200 PF02779 Transketolase, pyrimidine binding domain DIE29_RS07200 PF16870 2-oxoglutarate dehydrogenase C-terminal DIE29_RS07200 PF16078 2-oxoglutarate dehydrogenase N-terminus DIE29_RS07205 PF02817 e3 binding domain DIE29_RS07205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DIE29_RS07205 PF00364 Biotin-requiring enzyme DIE29_RS07210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DIE29_RS07210 PF07992 Pyridine nucleotide-disulphide oxidoreductase DIE29_RS07215 PF03969 AFG1-like ATPase DIE29_RS07230 PF04851 Type III restriction enzyme, res subunit DIE29_RS07230 PF13307 Helicase C-terminal domain DIE29_RS07235 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DIE29_RS07240 PF01668 SmpB protein DIE29_RS07250 PF03658 RnfH family Ubiquitin DIE29_RS07260 PF00571 CBS domain DIE29_RS07260 PF00478 IMP dehydrogenase / GMP reductase domain DIE29_RS07265 PF02540 NAD synthase DIE29_RS07265 PF00117 Glutamine amidotransferase class-I DIE29_RS07265 PF00958 GMP synthase C terminal domain DIE29_RS07280 PF13817 IS66 C-terminal element DIE29_RS07280 PF03050 Transposase IS66 family DIE29_RS07280 PF13007 Transposase C of IS166 homeodomain DIE29_RS07280 PF13005 zinc-finger binding domain of transposase IS66 DIE29_RS07305 PF01207 Dihydrouridine synthase (Dus) DIE29_RS07310 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus DIE29_RS07310 PF05175 Methyltransferase small domain DIE29_RS07315 PF02810 SEC-C motif DIE29_RS07315 PF03695 Uncharacterised protein family (UPF0149) DIE29_RS07325 PF03692 Putative zinc- or iron-chelating domain DIE29_RS07355 PF00330 Aconitase family (aconitate hydratase) DIE29_RS07355 PF00694 Aconitase C-terminal domain DIE29_RS07360 PF11791 Aconitate B N-terminal domain DIE29_RS07360 PF00330 Aconitase family (aconitate hydratase) DIE29_RS07360 PF06434 Aconitate hydratase 2 N-terminus DIE29_RS07365 PF00459 Inositol monophosphatase family DIE29_RS07370 PF00588 SpoU rRNA Methylase family DIE29_RS07375 PF00132 Bacterial transferase hexapeptide (six repeats) DIE29_RS07380 PF02082 Transcriptional regulator DIE29_RS07385 PF00266 Aminotransferase class-V DIE29_RS07390 PF00266 Aminotransferase class-V DIE29_RS07395 PF01592 NifU-like N terminal domain DIE29_RS07400 PF01521 Iron-sulphur cluster biosynthesis DIE29_RS07405 PF07743 HSCB C-terminal oligomerisation domain DIE29_RS07410 PF00012 Hsp70 protein DIE29_RS07415 PF00111 2Fe-2S iron-sulfur cluster binding domain DIE29_RS07420 PF04384 Iron-sulphur cluster assembly DIE29_RS07425 PF00255 Glutathione peroxidase DIE29_RS07430 PF00072 Response regulator receiver domain DIE29_RS07435 PF05175 Methyltransferase small domain DIE29_RS07440 PF01546 Peptidase family M20/M25/M40 DIE29_RS07440 PF07687 Peptidase dimerisation domain DIE29_RS07445 PF00437 Type II/IV secretion system protein DIE29_RS07450 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DIE29_RS07450 PF14602 Hexapeptide repeat of succinyl-transferase DIE29_RS07455 PF00155 Aminotransferase class I and II DIE29_RS07460 PF02463 RecF/RecN/SMC N terminal domain DIE29_RS07470 PF12826 Helix-hairpin-helix motif DIE29_RS07470 PF00533 BRCA1 C Terminus (BRCT) domain DIE29_RS07470 PF01653 NAD-dependent DNA ligase adenylation domain DIE29_RS07470 PF03120 NAD-dependent DNA ligase OB-fold domain DIE29_RS07470 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DIE29_RS07475 PF00483 Nucleotidyl transferase DIE29_RS07480 PF03144 Elongation factor Tu domain 2 DIE29_RS07480 PF00009 Elongation factor Tu GTP binding domain DIE29_RS07480 PF00679 Elongation factor G C-terminus DIE29_RS07485 PF01048 Phosphorylase superfamily DIE29_RS07490 PF02558 Ketopantoate reductase PanE/ApbA DIE29_RS07490 PF08546 Ketopantoate reductase PanE/ApbA C terminal DIE29_RS07495 PF18073 Rubredoxin metal binding domain DIE29_RS07500 PF03466 LysR substrate binding domain DIE29_RS07500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS07505 PF07690 Major Facilitator Superfamily DIE29_RS07510 PF03167 Uracil DNA glycosylase superfamily DIE29_RS07520 PF00814 Glycoprotease family DIE29_RS07530 PF00072 Response regulator receiver domain DIE29_RS07530 PF00486 Transcriptional regulatory protein, C terminal DIE29_RS07535 PF00672 HAMP domain DIE29_RS07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS07535 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS07545 PF04279 Intracellular septation protein A DIE29_RS07550 PF03795 YCII-related domain DIE29_RS07565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DIE29_RS07565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DIE29_RS07565 PF12806 Acetyl-CoA dehydrogenase C-terminal like DIE29_RS07565 PF02770 Acyl-CoA dehydrogenase, middle domain DIE29_RS07575 PF01012 Electron transfer flavoprotein domain DIE29_RS07575 PF00766 Electron transfer flavoprotein FAD-binding domain DIE29_RS07580 PF01012 Electron transfer flavoprotein domain DIE29_RS07585 PF00440 Bacterial regulatory proteins, tetR family DIE29_RS07585 PF08361 MAATS-type transcriptional repressor, C-terminal region DIE29_RS07590 PF03023 Lipid II flippase MurJ DIE29_RS07595 PF01161 Phosphatidylethanolamine-binding protein DIE29_RS07600 PF00365 Phosphofructokinase DIE29_RS07605 PF05191 Adenylate kinase, active site lid DIE29_RS07610 PF02348 Cytidylyltransferase DIE29_RS07615 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DIE29_RS07620 PF02472 Biopolymer transport protein ExbD/TolR DIE29_RS07625 PF01618 MotA/TolQ/ExbB proton channel family DIE29_RS07630 PF13742 OB-fold nucleic acid binding domain DIE29_RS07630 PF02601 Exonuclease VII, large subunit DIE29_RS07640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DIE29_RS07640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DIE29_RS07645 PF01026 TatD related DNase DIE29_RS07650 PF00378 Enoyl-CoA hydratase/isomerase DIE29_RS07655 PF00501 AMP-binding enzyme DIE29_RS07655 PF13193 AMP-binding enzyme C-terminal domain DIE29_RS07670 PF09383 NIL domain DIE29_RS07670 PF00005 ABC transporter DIE29_RS07675 PF02405 Permease MlaE DIE29_RS07680 PF02541 Ppx/GppA phosphatase family DIE29_RS07685 PF02503 Polyphosphate kinase middle domain DIE29_RS07685 PF13089 Polyphosphate kinase N-terminal domain DIE29_RS07685 PF17941 Polyphosphate kinase C-terminal domain 1 DIE29_RS07685 PF13090 Polyphosphate kinase C-terminal domain 2 DIE29_RS07690 PF04607 Region found in RelA / SpoT proteins DIE29_RS07690 PF13291 ACT domain DIE29_RS07690 PF02824 TGS domain DIE29_RS07700 PF06167 Glucose-regulated metallo-peptidase M90 DIE29_RS07715 PF03050 Transposase IS66 family DIE29_RS07715 PF13817 IS66 C-terminal element DIE29_RS07715 PF13005 zinc-finger binding domain of transposase IS66 DIE29_RS07715 PF13007 Transposase C of IS166 homeodomain DIE29_RS07740 PF02542 YgbB family DIE29_RS07745 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DIE29_RS07770 PF17757 UvrB interaction domain DIE29_RS07770 PF00270 DEAD/DEAH box helicase DIE29_RS07770 PF02559 CarD-like/TRCF domain DIE29_RS07770 PF00271 Helicase conserved C-terminal domain DIE29_RS07770 PF03461 TRCF domain DIE29_RS07775 PF00313 'Cold-shock' DNA-binding domain DIE29_RS07780 PF03880 DbpA RNA binding domain DIE29_RS07780 PF00270 DEAD/DEAH box helicase DIE29_RS07780 PF00271 Helicase conserved C-terminal domain DIE29_RS07790 PF00246 Zinc carboxypeptidase DIE29_RS07790 PF18027 Cytosolic carboxypeptidase N-terminal domain DIE29_RS07795 PF03883 Peroxide stress protein YaaA DIE29_RS07800 PF00202 Aminotransferase class-III DIE29_RS07805 PF00155 Aminotransferase class I and II DIE29_RS07810 PF12697 Alpha/beta hydrolase family DIE29_RS07815 PF08241 Methyltransferase domain DIE29_RS07825 PF02080 TrkA-C domain DIE29_RS07825 PF03600 Citrate transporter DIE29_RS07830 PF01814 Hemerythrin HHE cation binding domain DIE29_RS07835 PF12392 Collagenase DIE29_RS07835 PF01136 Peptidase family U32 DIE29_RS07850 PF13005 zinc-finger binding domain of transposase IS66 DIE29_RS07850 PF13007 Transposase C of IS166 homeodomain DIE29_RS07850 PF03050 Transposase IS66 family DIE29_RS07850 PF13817 IS66 C-terminal element DIE29_RS07860 PF01136 Peptidase family U32 DIE29_RS07860 PF12392 Collagenase DIE29_RS07865 PF04102 SlyX DIE29_RS07870 PF01926 50S ribosome-binding GTPase DIE29_RS07875 PF00793 DAHP synthetase I family DIE29_RS07890 PF06463 Molybdenum Cofactor Synthesis C DIE29_RS07890 PF04055 Radical SAM superfamily DIE29_RS07900 PF00563 EAL domain DIE29_RS07900 PF05231 MASE1 DIE29_RS07910 PF07687 Peptidase dimerisation domain DIE29_RS07910 PF01546 Peptidase family M20/M25/M40 DIE29_RS07920 PF14403 Circularly permuted ATP-grasp type 2 DIE29_RS07920 PF04168 A predicted alpha-helical domain with a conserved ER motif. DIE29_RS07925 PF08379 Bacterial transglutaminase-like N-terminal region DIE29_RS07925 PF01841 Transglutaminase-like superfamily DIE29_RS07930 PF00850 Histone deacetylase domain DIE29_RS07945 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS07945 PF00563 EAL domain DIE29_RS07945 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS07950 PF00916 Sulfate permease family DIE29_RS07950 PF01740 STAS domain DIE29_RS07965 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) DIE29_RS07970 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DIE29_RS07975 PF00148 Nitrogenase component 1 type Oxidoreductase DIE29_RS07980 PF00148 Nitrogenase component 1 type Oxidoreductase DIE29_RS07980 PF11844 Domain of unknown function (DUF3364) DIE29_RS07985 PF06988 NifT/FixU protein DIE29_RS07990 PF00037 4Fe-4S binding domain DIE29_RS07995 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal DIE29_RS07995 PF02579 Dinitrogenase iron-molybdenum cofactor DIE29_RS08000 PF03747 ADP-ribosylglycohydrolase DIE29_RS08005 PF04891 NifQ DIE29_RS08010 PF12838 4Fe-4S dicluster domain DIE29_RS08015 PF02579 Dinitrogenase iron-molybdenum cofactor DIE29_RS08015 PF04055 Radical SAM superfamily DIE29_RS08040 PF13185 GAF domain DIE29_RS08040 PF00158 Sigma-54 interaction domain DIE29_RS08040 PF02954 Bacterial regulatory protein, Fis family DIE29_RS08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS08045 PF00989 PAS fold DIE29_RS08050 PF02508 Rnf-Nqr subunit, membrane protein DIE29_RS08055 PF04060 Putative Fe-S cluster DIE29_RS08060 PF10531 SLBB domain DIE29_RS08060 PF13375 RnfC Barrel sandwich hybrid domain DIE29_RS08060 PF13237 4Fe-4S dicluster domain DIE29_RS08060 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DIE29_RS08065 PF03116 NQR2, RnfD, RnfE family DIE29_RS08070 PF04205 FMN-binding domain DIE29_RS08075 PF02508 Rnf-Nqr subunit, membrane protein DIE29_RS08080 PF03658 RnfH family Ubiquitin DIE29_RS08095 PF00148 Nitrogenase component 1 type Oxidoreductase DIE29_RS08100 PF00148 Nitrogenase component 1 type Oxidoreductase DIE29_RS08105 PF02579 Dinitrogenase iron-molybdenum cofactor DIE29_RS08115 PF13808 DDE_Tnp_1-associated DIE29_RS08115 PF01609 Transposase DDE domain DIE29_RS08120 PF03270 Protein of unknown function, DUF269 DIE29_RS08130 PF12838 4Fe-4S dicluster domain DIE29_RS08140 PF01521 Iron-sulphur cluster biosynthesis DIE29_RS08145 PF01592 NifU-like N terminal domain DIE29_RS08145 PF01106 NifU-like domain DIE29_RS08145 PF04324 BFD-like [2Fe-2S] binding domain DIE29_RS08150 PF00266 Aminotransferase class-V DIE29_RS08155 PF00682 HMGL-like DIE29_RS08160 PF00132 Bacterial transferase hexapeptide (six repeats) DIE29_RS08165 PF03206 Nitrogen fixation protein NifW DIE29_RS08170 PF04319 NifZ domain DIE29_RS08175 PF00639 PPIC-type PPIASE domain DIE29_RS08180 PF07992 Pyridine nucleotide-disulphide oxidoreductase DIE29_RS08180 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding DIE29_RS08180 PF10518 TAT (twin-arginine translocation) pathway signal sequence DIE29_RS08190 PF01026 TatD related DNase DIE29_RS08200 PF09115 DNA polymerase III, delta subunit, C terminal DIE29_RS08205 PF02223 Thymidylate kinase DIE29_RS08210 PF02618 YceG-like family DIE29_RS08215 PF01571 Aminomethyltransferase folate-binding domain DIE29_RS08230 PF13673 Acetyltransferase (GNAT) domain DIE29_RS08235 PF01476 LysM domain DIE29_RS08235 PF03734 L,D-transpeptidase catalytic domain DIE29_RS08240 PF14437 MafB19-like deaminase DIE29_RS08245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS08245 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS08245 PF00989 PAS fold DIE29_RS08250 PF13193 AMP-binding enzyme C-terminal domain DIE29_RS08250 PF00501 AMP-binding enzyme DIE29_RS08255 PF00011 Hsp20/alpha crystallin family DIE29_RS08260 PF00011 Hsp20/alpha crystallin family DIE29_RS08265 PF01435 Peptidase family M48 DIE29_RS08270 PF04461 Protein of unknown function (DUF520) DIE29_RS08275 PF06865 Pyrimidine/purine nucleoside phosphorylase DIE29_RS08285 PF00764 Arginosuccinate synthase DIE29_RS08290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DIE29_RS08290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DIE29_RS08295 PF00202 Aminotransferase class-III DIE29_RS08305 PF01649 Ribosomal protein S20 DIE29_RS08310 PF00923 Transaldolase/Fructose-6-phosphate aldolase DIE29_RS08320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS08320 PF02895 Signal transducing histidine kinase, homodimeric domain DIE29_RS08320 PF01627 Hpt domain DIE29_RS08320 PF01584 CheW-like domain DIE29_RS08320 PF00072 Response regulator receiver domain DIE29_RS08325 PF04344 Chemotaxis phosphatase, CheZ DIE29_RS08330 PF00072 Response regulator receiver domain DIE29_RS08335 PF00072 Response regulator receiver domain DIE29_RS08335 PF01584 CheW-like domain DIE29_RS08340 PF01584 CheW-like domain DIE29_RS08340 PF00072 Response regulator receiver domain DIE29_RS08345 PF00072 Response regulator receiver domain DIE29_RS08345 PF01339 CheB methylesterase DIE29_RS08350 PF03705 CheR methyltransferase, all-alpha domain DIE29_RS08350 PF01739 CheR methyltransferase, SAM binding domain DIE29_RS08355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS08355 PF08447 PAS fold DIE29_RS08355 PF08447 PAS fold DIE29_RS08355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS08360 PF01627 Hpt domain DIE29_RS08360 PF01584 CheW-like domain DIE29_RS08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS08360 PF09078 CheY binding DIE29_RS08360 PF02895 Signal transducing histidine kinase, homodimeric domain DIE29_RS08365 PF01627 Hpt domain DIE29_RS08365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS08365 PF00072 Response regulator receiver domain DIE29_RS08365 PF01584 CheW-like domain DIE29_RS08370 PF13677 Membrane MotB of proton-channel complex MotA/MotB DIE29_RS08370 PF00691 OmpA family DIE29_RS08375 PF01618 MotA/TolQ/ExbB proton channel family DIE29_RS08380 PF05280 Flagellar transcriptional activator (FlhC) DIE29_RS08385 PF05247 Flagellar transcriptional activator (FlhD) DIE29_RS08390 PF00563 EAL domain DIE29_RS08390 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS08390 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS08395 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS08395 PF00072 Response regulator receiver domain DIE29_RS08410 PF00005 ABC transporter DIE29_RS08415 PF02653 Branched-chain amino acid transport system / permease component DIE29_RS08420 PF02653 Branched-chain amino acid transport system / permease component DIE29_RS08425 PF02608 ABC transporter substrate-binding protein PnrA-like DIE29_RS08430 PF01979 Amidohydrolase family DIE29_RS08435 PF17149 Periplasmic sensor domain found in signal transduction proteins DIE29_RS08435 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS08435 PF00072 Response regulator receiver domain DIE29_RS08435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS08435 PF01627 Hpt domain DIE29_RS08435 PF00672 HAMP domain DIE29_RS08450 PF02743 Cache domain DIE29_RS08450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS08450 PF00672 HAMP domain DIE29_RS08455 PF13145 PPIC-type PPIASE domain DIE29_RS08460 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS08460 PF00563 EAL domain DIE29_RS08460 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS08470 PF00005 ABC transporter DIE29_RS08475 PF13472 GDSL-like Lipase/Acylhydrolase family DIE29_RS08480 PF02769 AIR synthase related protein, C-terminal domain DIE29_RS08480 PF00586 AIR synthase related protein, N-terminal domain DIE29_RS08485 PF00581 Rhodanese-like domain DIE29_RS08495 PF00171 Aldehyde dehydrogenase family DIE29_RS08500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS08500 PF12729 Four helix bundle sensory module for signal transduction DIE29_RS08500 PF00672 HAMP domain DIE29_RS08510 PF01609 Transposase DDE domain DIE29_RS08510 PF13808 DDE_Tnp_1-associated DIE29_RS08515 PF00989 PAS fold DIE29_RS08515 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS08515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS08530 PF13607 Succinyl-CoA ligase like flavodoxin domain DIE29_RS08530 PF00583 Acetyltransferase (GNAT) family DIE29_RS08530 PF13380 CoA binding domain DIE29_RS08535 PF01263 Aldose 1-epimerase DIE29_RS08540 PF09371 Tex-like protein N-terminal domain DIE29_RS08540 PF00575 S1 RNA binding domain DIE29_RS08540 PF16921 Tex protein YqgF-like domain DIE29_RS08540 PF17674 HHH domain DIE29_RS08545 PF03960 ArsC family DIE29_RS08550 PF01430 Hsp33 protein DIE29_RS08560 PF03775 Septum formation inhibitor MinC, C-terminal domain DIE29_RS08560 PF05209 Septum formation inhibitor MinC, N-terminal domain DIE29_RS08565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DIE29_RS08570 PF03776 Septum formation topological specificity factor MinE DIE29_RS08575 PF01743 Poly A polymerase head domain DIE29_RS08575 PF12626 Polymerase A arginine-rich C-terminus DIE29_RS08575 PF12627 Probable RNA and SrmB- binding site of polymerase A DIE29_RS08580 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DIE29_RS08590 PF01712 Deoxynucleoside kinase DIE29_RS08595 PF02548 Ketopantoate hydroxymethyltransferase DIE29_RS08600 PF02569 Pantoate-beta-alanine ligase DIE29_RS08610 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DIE29_RS08610 PF01433 Peptidase family M1 domain DIE29_RS08610 PF11940 Domain of unknown function (DUF3458) Ig-like fold DIE29_RS08615 PF00690 Cation transporter/ATPase, N-terminus DIE29_RS08615 PF00689 Cation transporting ATPase, C-terminus DIE29_RS08625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DIE29_RS08625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DIE29_RS08625 PF00205 Thiamine pyrophosphate enzyme, central domain DIE29_RS08630 PF10369 Small subunit of acetolactate synthase DIE29_RS08635 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DIE29_RS08635 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DIE29_RS08640 PF01066 CDP-alcohol phosphatidyltransferase DIE29_RS08645 PF00682 HMGL-like DIE29_RS08645 PF08502 LeuA allosteric (dimerisation) domain DIE29_RS08655 PF03358 NADPH-dependent FMN reductase DIE29_RS08670 PF01810 LysE type translocator DIE29_RS08675 PF00156 Phosphoribosyl transferase domain DIE29_RS08685 PF00072 Response regulator receiver domain DIE29_RS08690 PF07859 alpha/beta hydrolase fold DIE29_RS08695 PF01053 Cys/Met metabolism PLP-dependent enzyme DIE29_RS08720 PF00884 Sulfatase DIE29_RS08720 PF08019 Phosphoethanolamine transferase EptA/EptB DIE29_RS08735 PF01066 CDP-alcohol phosphatidyltransferase DIE29_RS08740 PF01541 GIY-YIG catalytic domain DIE29_RS08740 PF02151 UvrB/uvrC motif DIE29_RS08740 PF08459 UvrC Helix-hairpin-helix N-terminal DIE29_RS08745 PF00933 Glycosyl hydrolase family 3 N terminal domain DIE29_RS08750 PF01648 4'-phosphopantetheinyl transferase superfamily DIE29_RS08755 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DIE29_RS08760 PF11967 Recombination protein O N terminal DIE29_RS08760 PF02565 Recombination protein O C terminal DIE29_RS08765 PF01926 50S ribosome-binding GTPase DIE29_RS08765 PF07650 KH domain DIE29_RS08770 PF00035 Double-stranded RNA binding motif DIE29_RS08770 PF14622 Ribonuclease-III-like DIE29_RS08780 PF10502 Signal peptidase, peptidase S26 DIE29_RS08785 PF00679 Elongation factor G C-terminus DIE29_RS08785 PF00009 Elongation factor Tu GTP binding domain DIE29_RS08785 PF03144 Elongation factor Tu domain 2 DIE29_RS08785 PF06421 GTP-binding protein LepA C-terminus DIE29_RS08795 PF13180 PDZ domain DIE29_RS08805 PF03888 MucB/RseB N-terminal domain DIE29_RS08805 PF17188 MucB/RseB C-terminal domain DIE29_RS08815 PF04542 Sigma-70 region 2 DIE29_RS08815 PF08281 Sigma-70, region 4 DIE29_RS08820 PF00890 FAD binding domain DIE29_RS08820 PF02910 Fumarate reductase flavoprotein C-term DIE29_RS08830 PF00109 Beta-ketoacyl synthase, N-terminal domain DIE29_RS08830 PF02801 Beta-ketoacyl synthase, C-terminal domain DIE29_RS08835 PF00550 Phosphopantetheine attachment site DIE29_RS08845 PF00698 Acyl transferase domain DIE29_RS08850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DIE29_RS08850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DIE29_RS08855 PF02504 Fatty acid synthesis protein DIE29_RS08860 PF01783 Ribosomal L32p protein family DIE29_RS08865 PF02620 Large ribosomal RNA subunit accumulation protein YceD DIE29_RS08870 PF02545 Maf-like protein DIE29_RS08875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DIE29_RS08880 PF13419 Haloacid dehalogenase-like hydrolase DIE29_RS08885 PF01479 S4 domain DIE29_RS08885 PF00849 RNA pseudouridylate synthase DIE29_RS08890 PF00575 S1 RNA binding domain DIE29_RS08890 PF10150 Ribonuclease E/G family DIE29_RS08890 PF12111 Polyribonucleotide phosphorylase C terminal DIE29_RS08895 PF01451 Low molecular weight phosphotyrosine protein phosphatase DIE29_RS08900 PF00271 Helicase conserved C-terminal domain DIE29_RS08900 PF04851 Type III restriction enzyme, res subunit DIE29_RS08900 PF12344 Ultra-violet resistance protein B DIE29_RS08900 PF02151 UvrB/uvrC motif DIE29_RS08900 PF17757 UvrB interaction domain DIE29_RS08905 PF00155 Aminotransferase class I and II DIE29_RS08925 PF00072 Response regulator receiver domain DIE29_RS08930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS08930 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS08935 PF13473 Cupredoxin-like domain DIE29_RS08935 PF18793 Nitrous oxide reductase propeller repeat 2 DIE29_RS08935 PF18764 Nitrous oxide reductase propeller repeat DIE29_RS08940 PF04205 FMN-binding domain DIE29_RS08940 PF12801 4Fe-4S binding domain DIE29_RS08950 PF05048 Periplasmic copper-binding protein (NosD) DIE29_RS08955 PF00005 ABC transporter DIE29_RS08960 PF12679 ABC-2 family transporter protein DIE29_RS08985 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DIE29_RS08990 PF17763 Glutaminase/Asparaginase C-terminal domain DIE29_RS08990 PF00710 Asparaginase, N-terminal DIE29_RS08995 PF00206 Lyase DIE29_RS08995 PF10415 Fumarase C C-terminus DIE29_RS09000 PF01235 Sodium:alanine symporter family DIE29_RS09025 PF01258 Prokaryotic dksA/traR C4-type zinc finger DIE29_RS09030 PF00575 S1 RNA binding domain DIE29_RS09030 PF03725 3' exoribonuclease family, domain 2 DIE29_RS09030 PF00013 KH domain DIE29_RS09030 PF01138 3' exoribonuclease family, domain 1 DIE29_RS09030 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DIE29_RS09035 PF00312 Ribosomal protein S15 DIE29_RS09040 PF09157 Pseudouridine synthase II TruB, C-terminal DIE29_RS09040 PF01509 TruB family pseudouridylate synthase (N terminal domain) DIE29_RS09040 PF16198 tRNA pseudouridylate synthase B C-terminal domain DIE29_RS09045 PF02033 Ribosome-binding factor A DIE29_RS09050 PF00009 Elongation factor Tu GTP binding domain DIE29_RS09050 PF11987 Translation-initiation factor 2 DIE29_RS09050 PF08364 Bacterial translation initiation factor IF-2 associated region DIE29_RS09050 PF04760 Translation initiation factor IF-2, N-terminal region DIE29_RS09055 PF08529 NusA N-terminal domain DIE29_RS09055 PF13184 NusA-like KH domain DIE29_RS09060 PF17384 RimP C-terminal SH3 domain DIE29_RS09060 PF02576 RimP N-terminal domain DIE29_RS09070 PF13193 AMP-binding enzyme C-terminal domain DIE29_RS09070 PF00501 AMP-binding enzyme DIE29_RS09075 PF03061 Thioesterase superfamily DIE29_RS09090 PF02630 SCO1/SenC DIE29_RS09105 PF02769 AIR synthase related protein, C-terminal domain DIE29_RS09105 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DIE29_RS09105 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DIE29_RS09120 PF01551 Peptidase family M23 DIE29_RS09120 PF08525 Opacity-associated protein A N-terminal motif DIE29_RS09120 PF01476 LysM domain DIE29_RS09125 PF02896 PEP-utilising enzyme, TIM barrel domain DIE29_RS09125 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DIE29_RS09125 PF00391 PEP-utilising enzyme, mobile domain DIE29_RS09130 PF03618 Kinase/pyrophosphorylase DIE29_RS09140 PF01641 SelR domain DIE29_RS09150 PF03772 Competence protein DIE29_RS09150 PF00753 Metallo-beta-lactamase superfamily DIE29_RS09160 PF08447 PAS fold DIE29_RS09160 PF13426 PAS domain DIE29_RS09160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS09165 PF00005 ABC transporter DIE29_RS09170 PF02687 FtsX-like permease family DIE29_RS09170 PF12704 MacB-like periplasmic core domain DIE29_RS09180 PF01368 DHH family DIE29_RS09180 PF02272 DHHA1 domain DIE29_RS09180 PF17768 RecJ OB domain DIE29_RS09200 PF02463 RecF/RecN/SMC N terminal domain DIE29_RS09200 PF06470 SMC proteins Flexible Hinge Domain DIE29_RS09215 PF00155 Aminotransferase class I and II DIE29_RS09215 PF00392 Bacterial regulatory proteins, gntR family DIE29_RS09220 PF00672 HAMP domain DIE29_RS09220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS09220 PF12729 Four helix bundle sensory module for signal transduction DIE29_RS09225 PF01609 Transposase DDE domain DIE29_RS09225 PF13808 DDE_Tnp_1-associated DIE29_RS09230 PF00672 HAMP domain DIE29_RS09230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS09230 PF17200 Single Cache domain 2 DIE29_RS09235 PF00152 tRNA synthetases class II (D, K and N) DIE29_RS09235 PF01336 OB-fold nucleic acid binding domain DIE29_RS09240 PF05661 Protein of unknown function (DUF808) DIE29_RS09245 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DIE29_RS09245 PF01266 FAD dependent oxidoreductase DIE29_RS09260 PF00749 tRNA synthetases class I (E and Q), catalytic domain DIE29_RS09265 PF00293 NUDIX domain DIE29_RS09285 PF00216 Bacterial DNA-binding protein DIE29_RS09290 PF05362 Lon protease (S16) C-terminal proteolytic domain DIE29_RS09290 PF00004 ATPase family associated with various cellular activities (AAA) DIE29_RS09290 PF02190 ATP-dependent protease La (LON) substrate-binding domain DIE29_RS09295 PF07724 AAA domain (Cdc48 subfamily) DIE29_RS09295 PF06689 ClpX C4-type zinc finger DIE29_RS09295 PF10431 C-terminal, D2-small domain, of ClpB protein DIE29_RS09300 PF00574 Clp protease DIE29_RS09305 PF05698 Bacterial trigger factor protein (TF) C-terminus DIE29_RS09305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DIE29_RS09305 PF05697 Bacterial trigger factor protein (TF) DIE29_RS09310 PF06798 PrkA serine protein kinase C-terminal domain DIE29_RS09310 PF08298 PrkA AAA domain DIE29_RS09315 PF04285 Protein of unknown function (DUF444) DIE29_RS09320 PF04293 SpoVR like protein DIE29_RS09325 PF00563 EAL domain DIE29_RS09325 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS09325 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS09330 PF01256 Carbohydrate kinase DIE29_RS09330 PF03853 YjeF-related protein N-terminus DIE29_RS09335 PF00072 Response regulator receiver domain DIE29_RS09340 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DIE29_RS09340 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DIE29_RS09350 PF00291 Pyridoxal-phosphate dependent enzyme DIE29_RS09350 PF14821 Threonine synthase N terminus DIE29_RS09355 PF02580 D-Tyr-tRNA(Tyr) deacylase DIE29_RS09360 PF01842 ACT domain DIE29_RS09360 PF00742 Homoserine dehydrogenase DIE29_RS09360 PF03447 Homoserine dehydrogenase, NAD binding domain DIE29_RS09365 PF00155 Aminotransferase class I and II DIE29_RS09375 PF00578 AhpC/TSA family DIE29_RS09380 PF13638 PIN domain DIE29_RS09380 PF02562 PhoH-like protein DIE29_RS09395 PF00877 NlpC/P60 family DIE29_RS09405 PF13416 Bacterial extracellular solute-binding protein DIE29_RS09410 PF13291 ACT domain DIE29_RS09410 PF00291 Pyridoxal-phosphate dependent enzyme DIE29_RS09420 PF00348 Polyprenyl synthetase DIE29_RS09425 PF03009 Glycerophosphoryl diester phosphodiesterase family DIE29_RS09430 PF13416 Bacterial extracellular solute-binding protein DIE29_RS09440 PF00248 Aldo/keto reductase family DIE29_RS09445 PF01728 FtsJ-like methyltransferase DIE29_RS09445 PF18125 RlmM ferredoxin-like domain DIE29_RS09450 PF00271 Helicase conserved C-terminal domain DIE29_RS09450 PF00270 DEAD/DEAH box helicase DIE29_RS09470 PF00563 EAL domain DIE29_RS09470 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS09470 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS09480 PF02233 NAD(P) transhydrogenase beta subunit DIE29_RS09485 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DIE29_RS09490 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DIE29_RS09490 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DIE29_RS09500 PF02754 Cysteine-rich domain DIE29_RS09500 PF13183 4Fe-4S dicluster domain DIE29_RS09505 PF01565 FAD binding domain DIE29_RS09510 PF02913 FAD linked oxidases, C-terminal domain DIE29_RS09510 PF01565 FAD binding domain DIE29_RS09515 PF01261 Xylose isomerase-like TIM barrel DIE29_RS09520 PF00916 Sulfate permease family DIE29_RS09520 PF01740 STAS domain DIE29_RS09525 PF00829 Ribosomal prokaryotic L21 protein DIE29_RS09530 PF01016 Ribosomal L27 protein DIE29_RS09535 PF01018 GTP1/OBG DIE29_RS09535 PF01926 50S ribosome-binding GTPase DIE29_RS09540 PF00696 Amino acid kinase family DIE29_RS09540 PF01472 PUA domain DIE29_RS09560 PF02687 FtsX-like permease family DIE29_RS09560 PF12704 MacB-like periplasmic core domain DIE29_RS09560 PF00005 ABC transporter DIE29_RS09575 PF03334 Na+/H+ antiporter subunit DIE29_RS09580 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DIE29_RS09585 PF01899 Na+/H+ ion antiporter subunit DIE29_RS09590 PF00361 Proton-conducting membrane transporter DIE29_RS09595 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DIE29_RS09600 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DIE29_RS09600 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DIE29_RS09600 PF00361 Proton-conducting membrane transporter DIE29_RS09600 PF13244 Domain of unknown function (DUF4040) DIE29_RS09605 PF16177 Acetyl-coenzyme A synthetase N-terminus DIE29_RS09605 PF13193 AMP-binding enzyme C-terminal domain DIE29_RS09605 PF00501 AMP-binding enzyme DIE29_RS09610 PF00072 Response regulator receiver domain DIE29_RS09610 PF01627 Hpt domain DIE29_RS09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS09610 PF01584 CheW-like domain DIE29_RS09615 PF00107 Zinc-binding dehydrogenase DIE29_RS09625 PF07690 Major Facilitator Superfamily DIE29_RS09630 PF04011 LemA family DIE29_RS09640 PF00005 ABC transporter DIE29_RS09640 PF16326 ABC transporter C-terminal domain DIE29_RS09640 PF12848 ABC transporter DIE29_RS09660 PF01464 Transglycosylase SLT domain DIE29_RS09665 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DIE29_RS09665 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DIE29_RS09665 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DIE29_RS09675 PF00072 Response regulator receiver domain DIE29_RS09675 PF00158 Sigma-54 interaction domain DIE29_RS09675 PF02954 Bacterial regulatory protein, Fis family DIE29_RS09685 PF02397 Bacterial sugar transferase DIE29_RS09695 PF00005 ABC transporter DIE29_RS09695 PF12399 Branched-chain amino acid ATP-binding cassette transporter DIE29_RS09700 PF02653 Branched-chain amino acid transport system / permease component DIE29_RS09705 PF02653 Branched-chain amino acid transport system / permease component DIE29_RS09715 PF08448 PAS fold DIE29_RS09715 PF13426 PAS domain DIE29_RS09715 PF08447 PAS fold DIE29_RS09715 PF05231 MASE1 DIE29_RS09715 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS09715 PF00563 EAL domain DIE29_RS09730 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS09730 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS09730 PF00563 EAL domain DIE29_RS09735 PF01814 Hemerythrin HHE cation binding domain DIE29_RS09740 PF00072 Response regulator receiver domain DIE29_RS09745 PF00989 PAS fold DIE29_RS09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS09745 PF18415 Histidine kinase receptor ArcB trans-membrane domain DIE29_RS09745 PF00072 Response regulator receiver domain DIE29_RS09745 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS09745 PF01627 Hpt domain DIE29_RS09755 PF00183 Hsp90 protein DIE29_RS09755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS09760 PF01272 Transcription elongation factor, GreA/GreB, C-term DIE29_RS09760 PF03449 Transcription elongation factor, N-terminal DIE29_RS09770 PF01053 Cys/Met metabolism PLP-dependent enzyme DIE29_RS09775 PF00561 alpha/beta hydrolase fold DIE29_RS09775 PF08386 TAP-like protein DIE29_RS09790 PF01545 Cation efflux family DIE29_RS09805 PF00374 Nickel-dependent hydrogenase DIE29_RS09810 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DIE29_RS09815 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DIE29_RS09820 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DIE29_RS09820 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DIE29_RS09825 PF00317 Ribonucleotide reductase, all-alpha domain DIE29_RS09825 PF02867 Ribonucleotide reductase, barrel domain DIE29_RS09825 PF03477 ATP cone domain DIE29_RS09830 PF01230 HIT domain DIE29_RS09835 PF00293 NUDIX domain DIE29_RS09845 PF00361 Proton-conducting membrane transporter DIE29_RS09850 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DIE29_RS09850 PF00361 Proton-conducting membrane transporter DIE29_RS09855 PF00361 Proton-conducting membrane transporter DIE29_RS09855 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DIE29_RS09860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DIE29_RS09865 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DIE29_RS09870 PF12838 4Fe-4S dicluster domain DIE29_RS09875 PF00146 NADH dehydrogenase DIE29_RS09880 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DIE29_RS09880 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DIE29_RS09880 PF00384 Molybdopterin oxidoreductase DIE29_RS09885 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DIE29_RS09885 PF10531 SLBB domain DIE29_RS09885 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DIE29_RS09895 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DIE29_RS09900 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DIE29_RS09905 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DIE29_RS09910 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DIE29_RS09920 PF03840 Preprotein translocase SecG subunit DIE29_RS09925 PF00121 Triosephosphate isomerase DIE29_RS09945 PF01022 Bacterial regulatory protein, arsR family DIE29_RS09950 PF01451 Low molecular weight phosphotyrosine protein phosphatase DIE29_RS09955 PF06953 Arsenical resistance operon trans-acting repressor ArsD DIE29_RS09960 PF02374 Anion-transporting ATPase DIE29_RS09970 PF01758 Sodium Bile acid symporter family DIE29_RS09975 PF08281 Sigma-70, region 4 DIE29_RS09975 PF04542 Sigma-70 region 2 DIE29_RS09985 PF03773 Predicted permease DIE29_RS10000 PF08447 PAS fold DIE29_RS10000 PF13426 PAS domain DIE29_RS10000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS10005 PF00005 ABC transporter DIE29_RS10010 PF00528 Binding-protein-dependent transport system inner membrane component DIE29_RS10015 PF00528 Binding-protein-dependent transport system inner membrane component DIE29_RS10020 PF12849 PBP superfamily domain DIE29_RS10025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DIE29_RS10025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DIE29_RS10025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DIE29_RS10025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DIE29_RS10030 PF00809 Pterin binding enzyme DIE29_RS10035 PF01434 Peptidase family M41 DIE29_RS10035 PF06480 FtsH Extracellular DIE29_RS10035 PF17862 AAA+ lid domain DIE29_RS10035 PF00004 ATPase family associated with various cellular activities (AAA) DIE29_RS10040 PF01728 FtsJ-like methyltransferase DIE29_RS10045 PF01985 CRS1 / YhbY (CRM) domain DIE29_RS10055 PF01272 Transcription elongation factor, GreA/GreB, C-term DIE29_RS10055 PF03449 Transcription elongation factor, N-terminal DIE29_RS10060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DIE29_RS10060 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DIE29_RS10060 PF02142 MGS-like domain DIE29_RS10065 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DIE29_RS10065 PF00117 Glutamine amidotransferase class-I DIE29_RS10070 PF00672 HAMP domain DIE29_RS10070 PF01627 Hpt domain DIE29_RS10070 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS10070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DIE29_RS10070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS10070 PF00072 Response regulator receiver domain DIE29_RS10075 PF05173 Dihydrodipicolinate reductase, C-terminus DIE29_RS10075 PF01113 Dihydrodipicolinate reductase, N-terminus DIE29_RS10080 PF04355 SmpA / OmlA family DIE29_RS10085 PF01475 Ferric uptake regulator family DIE29_RS10090 PF02463 RecF/RecN/SMC N terminal domain DIE29_RS10095 PF01513 ATP-NAD kinase DIE29_RS10100 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DIE29_RS10100 PF01628 HrcA protein C terminal domain DIE29_RS10105 PF00762 Ferrochelatase DIE29_RS10115 PF00069 Protein kinase domain DIE29_RS10115 PF03793 PASTA domain DIE29_RS10120 PF01025 GrpE DIE29_RS10125 PF00012 Hsp70 protein DIE29_RS10130 PF00226 DnaJ domain DIE29_RS10130 PF00684 DnaJ central domain DIE29_RS10130 PF01556 DnaJ C terminal domain DIE29_RS10140 PF09190 DALR domain DIE29_RS10140 PF01406 tRNA synthetases class I (C) catalytic domain DIE29_RS10155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DIE29_RS10160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DIE29_RS10165 PF00149 Calcineurin-like phosphoesterase DIE29_RS10170 PF01053 Cys/Met metabolism PLP-dependent enzyme DIE29_RS10175 PF00156 Phosphoribosyl transferase domain DIE29_RS10190 PF08245 Mur ligase middle domain DIE29_RS10190 PF02875 Mur ligase family, glutamate ligase domain DIE29_RS10195 PF01039 Carboxyl transferase domain DIE29_RS10195 PF17848 Acetyl-coA carboxylase zinc finger domain DIE29_RS10200 PF00290 Tryptophan synthase alpha chain DIE29_RS10205 PF00291 Pyridoxal-phosphate dependent enzyme DIE29_RS10210 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DIE29_RS10215 PF01416 tRNA pseudouridine synthase DIE29_RS10230 PF01118 Semialdehyde dehydrogenase, NAD binding domain DIE29_RS10230 PF02774 Semialdehyde dehydrogenase, dimerisation domain DIE29_RS10235 PF00180 Isocitrate/isopropylmalate dehydrogenase DIE29_RS10240 PF00694 Aconitase C-terminal domain DIE29_RS10245 PF00330 Aconitase family (aconitate hydratase) DIE29_RS10250 PF01435 Peptidase family M48 DIE29_RS10255 PF12832 MFS_1 like family DIE29_RS10260 PF01264 Chorismate synthase DIE29_RS10265 PF01842 ACT domain DIE29_RS10270 PF00205 Thiamine pyrophosphate enzyme, central domain DIE29_RS10270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DIE29_RS10270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DIE29_RS10275 PF00501 AMP-binding enzyme DIE29_RS10275 PF13193 AMP-binding enzyme C-terminal domain DIE29_RS10285 PF00037 4Fe-4S binding domain DIE29_RS10285 PF11953 Domain of unknown function (DUF3470) DIE29_RS10290 PF00085 Thioredoxin DIE29_RS10295 PF07497 Rho termination factor, RNA-binding domain DIE29_RS10295 PF07498 Rho termination factor, N-terminal domain DIE29_RS10295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DIE29_RS10300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DIE29_RS10300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DIE29_RS10335 PF02913 FAD linked oxidases, C-terminal domain DIE29_RS10335 PF01565 FAD binding domain DIE29_RS10340 PF01734 Patatin-like phospholipase DIE29_RS10345 PF04055 Radical SAM superfamily DIE29_RS10345 PF18693 TRAM domain DIE29_RS10345 PF00919 Uncharacterized protein family UPF0004 DIE29_RS10350 PF07879 PHB/PHA accumulation regulator DNA-binding domain DIE29_RS10350 PF05233 PHB accumulation regulatory domain DIE29_RS10355 PF00106 short chain dehydrogenase DIE29_RS10360 PF00106 short chain dehydrogenase DIE29_RS10365 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DIE29_RS10375 PF02578 Multi-copper polyphenol oxidoreductase laccase DIE29_RS10380 PF00849 RNA pseudouridylate synthase DIE29_RS10385 PF13525 Outer membrane lipoprotein DIE29_RS10390 PF01050 Mannose-6-phosphate isomerase DIE29_RS10390 PF00483 Nucleotidyl transferase DIE29_RS10400 PF00581 Rhodanese-like domain DIE29_RS10405 PF08331 Domain of unknown function (DUF1730) DIE29_RS10410 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DIE29_RS10415 PF11741 AMIN domain DIE29_RS10415 PF01520 N-acetylmuramoyl-L-alanine amidase DIE29_RS10420 PF01687 Riboflavin kinase DIE29_RS10420 PF06574 FAD synthetase DIE29_RS10425 PF08264 Anticodon-binding domain of tRNA DIE29_RS10425 PF00133 tRNA synthetases class I (I, L, M and V) DIE29_RS10425 PF06827 Zinc finger found in FPG and IleRS DIE29_RS10430 PF01252 Signal peptidase (SPase) II DIE29_RS10435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DIE29_RS10440 PF02401 LytB protein DIE29_RS10450 PF02609 Exonuclease VII small subunit DIE29_RS10455 PF00348 Polyprenyl synthetase DIE29_RS10460 PF02780 Transketolase, C-terminal domain DIE29_RS10460 PF02779 Transketolase, pyrimidine binding domain DIE29_RS10460 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DIE29_RS10465 PF02649 Type I GTP cyclohydrolase folE2 DIE29_RS10470 PF01575 MaoC like domain DIE29_RS10510 PF00303 Thymidylate synthase DIE29_RS10515 PF00186 Dihydrofolate reductase DIE29_RS10520 PF00719 Inorganic pyrophosphatase DIE29_RS10530 PF00403 Heavy-metal-associated domain DIE29_RS10535 PF09278 MerR, DNA binding DIE29_RS10535 PF00376 MerR family regulatory protein DIE29_RS10545 PF04055 Radical SAM superfamily DIE29_RS10545 PF06969 HemN C-terminal domain DIE29_RS10550 PF13545 Crp-like helix-turn-helix domain DIE29_RS10550 PF00027 Cyclic nucleotide-binding domain DIE29_RS10560 PF04247 Invasion gene expression up-regulator, SirB DIE29_RS10575 PF00561 alpha/beta hydrolase fold DIE29_RS10575 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DIE29_RS10600 PF12801 4Fe-4S binding domain DIE29_RS10600 PF13746 4Fe-4S dicluster domain DIE29_RS10600 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DIE29_RS10605 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DIE29_RS10605 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DIE29_RS10620 PF00115 Cytochrome C and Quinol oxidase polypeptide I DIE29_RS10630 PF00403 Heavy-metal-associated domain DIE29_RS10635 PF00106 short chain dehydrogenase DIE29_RS10645 PF10609 NUBPL iron-transfer P-loop NTPase DIE29_RS10650 PF05736 OprF membrane domain DIE29_RS10650 PF00691 OmpA family DIE29_RS10655 PF09334 tRNA synthetases class I (M) DIE29_RS10655 PF01588 Putative tRNA binding domain DIE29_RS10660 PF01740 STAS domain DIE29_RS10660 PF00916 Sulfate permease family DIE29_RS10665 PF00708 Acylphosphatase DIE29_RS10670 PF07733 Bacterial DNA polymerase III alpha NTPase domain DIE29_RS10670 PF02811 PHP domain DIE29_RS10670 PF01336 OB-fold nucleic acid binding domain DIE29_RS10670 PF14579 Helix-hairpin-helix motif DIE29_RS10670 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DIE29_RS10675 PF08240 Alcohol dehydrogenase GroES-like domain DIE29_RS10675 PF00107 Zinc-binding dehydrogenase DIE29_RS10680 PF01515 Phosphate acetyl/butaryl transferase DIE29_RS10680 PF03949 Malic enzyme, NAD binding domain DIE29_RS10680 PF00390 Malic enzyme, N-terminal domain DIE29_RS10690 PF10609 NUBPL iron-transfer P-loop NTPase DIE29_RS10690 PF01883 Iron-sulfur cluster assembly protein DIE29_RS10695 PF00580 UvrD/REP helicase N-terminal domain DIE29_RS10695 PF13361 UvrD-like helicase C-terminal domain DIE29_RS10705 PF13603 Leucyl-tRNA synthetase, Domain 2 DIE29_RS10705 PF00133 tRNA synthetases class I (I, L, M and V) DIE29_RS10705 PF08264 Anticodon-binding domain of tRNA DIE29_RS10705 PF09334 tRNA synthetases class I (M) DIE29_RS10715 PF14840 Processivity clamp loader gamma complex DNA pol III C-term DIE29_RS10715 PF06144 DNA polymerase III, delta subunit DIE29_RS10720 PF00171 Aldehyde dehydrogenase family DIE29_RS10730 PF00589 Phage integrase family DIE29_RS10730 PF02899 Phage integrase, N-terminal SAM-like domain DIE29_RS10735 PF04073 Aminoacyl-tRNA editing domain DIE29_RS10740 PF00816 H-NS histone family DIE29_RS10745 PF02152 Dihydroneopterin aldolase DIE29_RS10750 PF02660 Glycerol-3-phosphate acyltransferase DIE29_RS10755 PF00814 Glycoprotease family DIE29_RS10760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DIE29_RS10780 PF02978 Signal peptide binding domain DIE29_RS10780 PF00448 SRP54-type protein, GTPase domain DIE29_RS10780 PF02881 SRP54-type protein, helical bundle domain DIE29_RS10790 PF01595 Cyclin M transmembrane N-terminal domain DIE29_RS10790 PF03471 Transporter associated domain DIE29_RS10790 PF00571 CBS domain DIE29_RS10795 PF00437 Type II/IV secretion system protein DIE29_RS10795 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DIE29_RS10800 PF00482 Type II secretion system (T2SS), protein F DIE29_RS10805 PF01478 Type IV leader peptidase family DIE29_RS10805 PF06750 Bacterial Peptidase A24 N-terminal domain DIE29_RS10820 PF00152 tRNA synthetases class II (D, K and N) DIE29_RS10820 PF02938 GAD domain DIE29_RS10820 PF01336 OB-fold nucleic acid binding domain DIE29_RS10830 PF00545 ribonuclease DIE29_RS10845 PF00011 Hsp20/alpha crystallin family DIE29_RS10850 PF00696 Amino acid kinase family DIE29_RS10890 PF13193 AMP-binding enzyme C-terminal domain DIE29_RS10890 PF00501 AMP-binding enzyme DIE29_RS10895 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DIE29_RS10895 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DIE29_RS10915 PF01501 Glycosyl transferase family 8 DIE29_RS10915 PF00535 Glycosyl transferase family 2 DIE29_RS10920 PF13439 Glycosyltransferase Family 4 DIE29_RS10920 PF00534 Glycosyl transferases group 1 DIE29_RS10925 PF00535 Glycosyl transferase family 2 DIE29_RS10930 PF00535 Glycosyl transferase family 2 DIE29_RS10950 PF13439 Glycosyltransferase Family 4 DIE29_RS10950 PF00534 Glycosyl transferases group 1 DIE29_RS10955 PF00534 Glycosyl transferases group 1 DIE29_RS10955 PF08323 Starch synthase catalytic domain DIE29_RS10960 PF00733 Asparagine synthase DIE29_RS10960 PF13537 Glutamine amidotransferase domain DIE29_RS10965 PF00534 Glycosyl transferases group 1 DIE29_RS10990 PF02350 UDP-N-acetylglucosamine 2-epimerase DIE29_RS10995 PF01471 Putative peptidoglycan binding domain DIE29_RS10995 PF13401 AAA domain DIE29_RS11005 PF13614 AAA domain DIE29_RS11030 PF12704 MacB-like periplasmic core domain DIE29_RS11030 PF02687 FtsX-like permease family DIE29_RS11030 PF00005 ABC transporter DIE29_RS11040 PF01370 NAD dependent epimerase/dehydratase family DIE29_RS11050 PF00106 short chain dehydrogenase DIE29_RS11085 PF02649 Type I GTP cyclohydrolase folE2 DIE29_RS11090 PF02310 B12 binding domain DIE29_RS11090 PF13411 MerR HTH family regulatory protein DIE29_RS11100 PF01467 Cytidylyltransferase-like DIE29_RS11135 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DIE29_RS11165 PF00271 Helicase conserved C-terminal domain DIE29_RS11165 PF00570 HRDC domain DIE29_RS11165 PF16124 RecQ zinc-binding DIE29_RS11165 PF09382 RQC domain DIE29_RS11165 PF00270 DEAD/DEAH box helicase DIE29_RS11170 PF01625 Peptide methionine sulfoxide reductase DIE29_RS11180 PF00218 Indole-3-glycerol phosphate synthase DIE29_RS11185 PF02885 Glycosyl transferase family, helical bundle domain DIE29_RS11185 PF00591 Glycosyl transferase family, a/b domain DIE29_RS11190 PF00117 Glutamine amidotransferase class-I DIE29_RS11195 PF05853 beta-keto acid cleavage enzyme DIE29_RS11200 PF00202 Aminotransferase class-III DIE29_RS11205 PF00425 chorismate binding enzyme DIE29_RS11205 PF04715 Anthranilate synthase component I, N terminal region DIE29_RS11210 PF13419 Haloacid dehalogenase-like hydrolase DIE29_RS11215 PF00834 Ribulose-phosphate 3 epimerase family DIE29_RS11220 PF00437 Type II/IV secretion system protein DIE29_RS11220 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DIE29_RS11230 PF12773 Double zinc ribbon DIE29_RS11230 PF00498 FHA domain DIE29_RS11240 PF02629 CoA binding domain DIE29_RS11240 PF00549 CoA-ligase DIE29_RS11245 PF00549 CoA-ligase DIE29_RS11245 PF08442 ATP-grasp domain DIE29_RS11260 PF01784 NIF3 (NGG1p interacting factor 3) DIE29_RS11265 PF13180 PDZ domain DIE29_RS11265 PF17820 PDZ domain DIE29_RS11270 PF00902 Sec-independent protein translocase protein (TatC) DIE29_RS11275 PF02416 mttA/Hcf106 family DIE29_RS11280 PF02416 mttA/Hcf106 family DIE29_RS11290 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DIE29_RS11295 PF01502 Phosphoribosyl-AMP cyclohydrolase DIE29_RS11300 PF00977 Histidine biosynthesis protein DIE29_RS11305 PF00977 Histidine biosynthesis protein DIE29_RS11310 PF00117 Glutamine amidotransferase class-I DIE29_RS11315 PF00475 Imidazoleglycerol-phosphate dehydratase DIE29_RS11320 PF00155 Aminotransferase class I and II DIE29_RS11325 PF00815 Histidinol dehydrogenase DIE29_RS11330 PF01634 ATP phosphoribosyltransferase DIE29_RS11335 PF01272 Transcription elongation factor, GreA/GreB, C-term DIE29_RS11335 PF14760 Rnk N-terminus DIE29_RS11345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DIE29_RS11355 PF01061 ABC-2 type transporter DIE29_RS11360 PF00005 ABC transporter DIE29_RS11380 PF02470 MlaD protein DIE29_RS11385 PF02405 Permease MlaE DIE29_RS11390 PF00005 ABC transporter DIE29_RS11395 PF00571 CBS domain DIE29_RS11395 PF01380 SIS domain DIE29_RS11410 PF03968 OstA-like protein DIE29_RS11415 PF00378 Enoyl-CoA hydratase/isomerase DIE29_RS11425 PF01553 Acyltransferase DIE29_RS11435 PF02092 Glycyl-tRNA synthetase beta subunit DIE29_RS11435 PF05746 DALR anticodon binding domain DIE29_RS11440 PF02091 Glycyl-tRNA synthetase alpha subunit DIE29_RS11445 PF00795 Carbon-nitrogen hydrolase DIE29_RS11450 PF03471 Transporter associated domain DIE29_RS11450 PF00571 CBS domain DIE29_RS11455 PF02130 Uncharacterized protein family UPF0054 DIE29_RS11460 PF02562 PhoH-like protein DIE29_RS11465 PF00919 Uncharacterized protein family UPF0004 DIE29_RS11465 PF01938 TRAM domain DIE29_RS11465 PF04055 Radical SAM superfamily DIE29_RS11485 PF01695 IstB-like ATP binding protein DIE29_RS11495 PF00239 Resolvase, N terminal domain DIE29_RS11495 PF02796 Helix-turn-helix domain of resolvase DIE29_RS11515 PF13808 DDE_Tnp_1-associated DIE29_RS11515 PF01609 Transposase DDE domain DIE29_RS11525 PF01329 Pterin 4 alpha carbinolamine dehydratase DIE29_RS11530 PF03481 Putative GTP-binding controlling metal-binding DIE29_RS11530 PF01300 Telomere recombination DIE29_RS11535 PF02222 ATP-grasp domain DIE29_RS11535 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DIE29_RS11540 PF00731 AIR carboxylase DIE29_RS11545 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DIE29_RS11545 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DIE29_RS11560 PF02080 TrkA-C domain DIE29_RS11560 PF00999 Sodium/hydrogen exchanger family DIE29_RS11560 PF03471 Transporter associated domain DIE29_RS11565 PF00072 Response regulator receiver domain DIE29_RS11565 PF00196 Bacterial regulatory proteins, luxR family DIE29_RS11570 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS11570 PF00989 PAS fold DIE29_RS11580 PF17831 Pyruvate dehydrogenase E1 component middle domain DIE29_RS11580 PF00456 Transketolase, thiamine diphosphate binding domain DIE29_RS11585 PF02817 e3 binding domain DIE29_RS11585 PF00364 Biotin-requiring enzyme DIE29_RS11585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DIE29_RS11590 PF07992 Pyridine nucleotide-disulphide oxidoreductase DIE29_RS11590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DIE29_RS11610 PF00873 AcrB/AcrD/AcrF family DIE29_RS11615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DIE29_RS11630 PF00072 Response regulator receiver domain DIE29_RS11630 PF00486 Transcriptional regulatory protein, C terminal DIE29_RS11660 PF01464 Transglycosylase SLT domain DIE29_RS11660 PF00497 Bacterial extracellular solute-binding proteins, family 3 DIE29_RS11665 PF02403 Seryl-tRNA synthetase N-terminal domain DIE29_RS11665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DIE29_RS11675 PF12002 MgsA AAA+ ATPase C terminal DIE29_RS11675 PF00004 ATPase family associated with various cellular activities (AAA) DIE29_RS11675 PF16193 AAA C-terminal domain DIE29_RS11680 PF03548 Outer membrane lipoprotein carrier protein LolA DIE29_RS11685 PF17854 FtsK alpha domain DIE29_RS11685 PF09397 Ftsk gamma domain DIE29_RS11685 PF01580 FtsK/SpoIIIE family DIE29_RS11685 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DIE29_RS11690 PF00027 Cyclic nucleotide-binding domain DIE29_RS11690 PF13545 Crp-like helix-turn-helix domain DIE29_RS11695 PF07992 Pyridine nucleotide-disulphide oxidoreductase DIE29_RS11700 PF01713 Smr domain DIE29_RS11705 PF00543 Nitrogen regulatory protein P-II DIE29_RS11710 PF02540 NAD synthase DIE29_RS11710 PF00795 Carbon-nitrogen hydrolase DIE29_RS11715 PF01276 Orn/Lys/Arg decarboxylase, major domain DIE29_RS11715 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DIE29_RS11715 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DIE29_RS11720 PF00692 dUTPase DIE29_RS11725 PF03466 LysR substrate binding domain DIE29_RS11725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS11730 PF01274 Malate synthase DIE29_RS11740 PF01259 SAICAR synthetase DIE29_RS11750 PF01432 Peptidase family M3 DIE29_RS11760 PF13545 Crp-like helix-turn-helix domain DIE29_RS11760 PF00027 Cyclic nucleotide-binding domain DIE29_RS11770 PF00398 Ribosomal RNA adenine dimethylase DIE29_RS11775 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DIE29_RS11780 PF09312 SurA N-terminal domain DIE29_RS11780 PF00639 PPIC-type PPIASE domain DIE29_RS11785 PF04453 LPS transport system D DIE29_RS11785 PF03968 OstA-like protein DIE29_RS11790 PF01636 Phosphotransferase enzyme family DIE29_RS11795 PF00483 Nucleotidyl transferase DIE29_RS11800 PF05195 Aminopeptidase P, N-terminal domain DIE29_RS11800 PF00557 Metallopeptidase family M24 DIE29_RS11805 PF01494 FAD binding domain DIE29_RS11810 PF01207 Dihydrouridine synthase (Dus) DIE29_RS11815 PF02954 Bacterial regulatory protein, Fis family DIE29_RS11820 PF01808 AICARFT/IMPCHase bienzyme DIE29_RS11820 PF02142 MGS-like domain DIE29_RS11825 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DIE29_RS11825 PF02843 Phosphoribosylglycinamide synthetase, C domain DIE29_RS11825 PF02844 Phosphoribosylglycinamide synthetase, N domain DIE29_RS11830 PF01218 Coproporphyrinogen III oxidase DIE29_RS11840 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase DIE29_RS11845 PF02602 Uroporphyrinogen-III synthase HemD DIE29_RS11850 PF03900 Porphobilinogen deaminase, C-terminal domain DIE29_RS11850 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DIE29_RS11855 PF00311 Phosphoenolpyruvate carboxylase DIE29_RS11875 PF05567 Neisseria PilC beta-propeller domain DIE29_RS11895 PF07963 Prokaryotic N-terminal methylation motif DIE29_RS11895 PF12019 Type II transport protein GspH DIE29_RS11905 PF00072 Response regulator receiver domain DIE29_RS11905 PF04397 LytTr DNA-binding domain DIE29_RS11910 PF00206 Lyase DIE29_RS11910 PF14698 Argininosuccinate lyase C-terminal DIE29_RS11915 PF03881 Fructosamine kinase DIE29_RS11940 PF00462 Glutaredoxin DIE29_RS11945 PF05175 Methyltransferase small domain DIE29_RS11945 PF17827 PrmC N-terminal domain DIE29_RS11950 PF00472 RF-1 domain DIE29_RS11950 PF03462 PCRF domain DIE29_RS11955 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DIE29_RS11955 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DIE29_RS11955 PF01488 Shikimate / quinate 5-dehydrogenase DIE29_RS11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS11960 PF03466 LysR substrate binding domain DIE29_RS11965 PF02525 Flavodoxin-like fold DIE29_RS11980 PF03793 PASTA domain DIE29_RS11980 PF00069 Protein kinase domain DIE29_RS11995 PF01960 ArgJ family DIE29_RS12000 PF07517 SecA DEAD-like domain DIE29_RS12000 PF01043 SecA preprotein cross-linking domain DIE29_RS12000 PF07516 SecA Wing and Scaffold domain DIE29_RS12000 PF02810 SEC-C motif DIE29_RS12015 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DIE29_RS12020 PF12327 FtsZ family, C-terminal domain DIE29_RS12020 PF00091 Tubulin/FtsZ family, GTPase domain DIE29_RS12025 PF02491 SHS2 domain inserted in FTSA DIE29_RS12030 PF08478 POTRA domain, FtsQ-type DIE29_RS12030 PF03799 Cell division protein FtsQ DIE29_RS12035 PF07478 D-ala D-ala ligase C-terminus DIE29_RS12035 PF01820 D-ala D-ala ligase N-terminus DIE29_RS12040 PF01225 Mur ligase family, catalytic domain DIE29_RS12040 PF02875 Mur ligase family, glutamate ligase domain DIE29_RS12040 PF08245 Mur ligase middle domain DIE29_RS12045 PF03033 Glycosyltransferase family 28 N-terminal domain DIE29_RS12045 PF04101 Glycosyltransferase family 28 C-terminal domain DIE29_RS12050 PF01098 Cell cycle protein DIE29_RS12055 PF08245 Mur ligase middle domain DIE29_RS12060 PF00953 Glycosyl transferase family 4 DIE29_RS12060 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DIE29_RS12065 PF01225 Mur ligase family, catalytic domain DIE29_RS12065 PF08245 Mur ligase middle domain DIE29_RS12065 PF02875 Mur ligase family, glutamate ligase domain DIE29_RS12070 PF01225 Mur ligase family, catalytic domain DIE29_RS12070 PF02875 Mur ligase family, glutamate ligase domain DIE29_RS12070 PF08245 Mur ligase middle domain DIE29_RS12075 PF03717 Penicillin-binding Protein dimerisation domain DIE29_RS12075 PF00905 Penicillin binding protein transpeptidase domain DIE29_RS12085 PF01795 MraW methylase family DIE29_RS12090 PF02381 MraZ protein, putative antitoxin-like DIE29_RS12105 PF01979 Amidohydrolase family DIE29_RS12110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DIE29_RS12115 PF02021 Uncharacterised protein family UPF0102 DIE29_RS12120 PF13580 SIS domain DIE29_RS12125 PF04972 BON domain DIE29_RS12130 PF01165 Ribosomal protein S21 DIE29_RS12140 PF01807 CHC2 zinc finger DIE29_RS12140 PF08275 DNA primase catalytic core, N-terminal domain DIE29_RS12140 PF08278 DNA primase DnaG DnaB-binding DIE29_RS12140 PF10410 DnaB-helicase binding domain of primase DIE29_RS12145 PF00140 Sigma-70 factor, region 1.2 DIE29_RS12145 PF04542 Sigma-70 region 2 DIE29_RS12145 PF04539 Sigma-70 region 3 DIE29_RS12145 PF04545 Sigma-70, region 4 DIE29_RS12145 PF04546 Sigma-70, non-essential region DIE29_RS12145 PF03979 Sigma-70 factor, region 1.1 DIE29_RS12155 PF00589 Phage integrase family DIE29_RS12175 PF01609 Transposase DDE domain DIE29_RS12175 PF13808 DDE_Tnp_1-associated DIE29_RS12180 PF01609 Transposase DDE domain DIE29_RS12180 PF13808 DDE_Tnp_1-associated DIE29_RS12205 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DIE29_RS12230 PF02151 UvrB/uvrC motif DIE29_RS12230 PF17757 UvrB interaction domain DIE29_RS12230 PF00271 Helicase conserved C-terminal domain DIE29_RS12230 PF12344 Ultra-violet resistance protein B DIE29_RS12230 PF04851 Type III restriction enzyme, res subunit DIE29_RS12245 PF00176 SNF2 family N-terminal domain DIE29_RS12245 PF00271 Helicase conserved C-terminal domain DIE29_RS12265 PF08245 Mur ligase middle domain DIE29_RS12265 PF02875 Mur ligase family, glutamate ligase domain DIE29_RS12265 PF01225 Mur ligase family, catalytic domain DIE29_RS12275 PF00578 AhpC/TSA family DIE29_RS12280 PF01220 Dehydroquinase class II DIE29_RS12285 PF00364 Biotin-requiring enzyme DIE29_RS12290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DIE29_RS12290 PF00289 Biotin carboxylase, N-terminal domain DIE29_RS12290 PF02785 Biotin carboxylase C-terminal domain DIE29_RS12305 PF01219 Prokaryotic diacylglycerol kinase DIE29_RS12315 PF00294 pfkB family carbohydrate kinase DIE29_RS12320 PF00534 Glycosyl transferases group 1 DIE29_RS12320 PF13439 Glycosyltransferase Family 4 DIE29_RS12355 PF00005 ABC transporter DIE29_RS12385 PF00263 Bacterial type II and III secretion system protein DIE29_RS12385 PF03958 Bacterial type II/III secretion system short domain DIE29_RS12415 PF07963 Prokaryotic N-terminal methylation motif DIE29_RS12420 PF12019 Type II transport protein GspH DIE29_RS12425 PF08334 Type II secretion system (T2SS), protein G DIE29_RS12425 PF07963 Prokaryotic N-terminal methylation motif DIE29_RS12430 PF00482 Type II secretion system (T2SS), protein F DIE29_RS12435 PF00437 Type II/IV secretion system protein DIE29_RS12435 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DIE29_RS12445 PF00534 Glycosyl transferases group 1 DIE29_RS12445 PF13477 Glycosyl transferase 4-like DIE29_RS12450 PF00149 Calcineurin-like phosphoesterase DIE29_RS12455 PF02719 Polysaccharide biosynthesis protein DIE29_RS12460 PF00953 Glycosyl transferase family 4 DIE29_RS12460 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DIE29_RS12465 PF01370 NAD dependent epimerase/dehydratase family DIE29_RS12470 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DIE29_RS12470 PF00534 Glycosyl transferases group 1 DIE29_RS12475 PF02321 Outer membrane efflux protein DIE29_RS12480 PF00581 Rhodanese-like domain DIE29_RS12495 PF00392 Bacterial regulatory proteins, gntR family DIE29_RS12495 PF00155 Aminotransferase class I and II DIE29_RS12505 PF04023 FeoA domain DIE29_RS12510 PF07670 Nucleoside recognition DIE29_RS12510 PF02421 Ferrous iron transport protein B DIE29_RS12510 PF17910 FeoB cytosolic helical domain DIE29_RS12510 PF07664 Ferrous iron transport protein B C terminus DIE29_RS12520 PF00194 Eukaryotic-type carbonic anhydrase DIE29_RS12525 PF08543 Phosphomethylpyrimidine kinase DIE29_RS12530 PF13667 ThiC-associated domain DIE29_RS12530 PF01964 Radical SAM ThiC family DIE29_RS12550 PF05728 Uncharacterised protein family (UPF0227) DIE29_RS12555 PF01209 ubiE/COQ5 methyltransferase family DIE29_RS12560 PF00892 EamA-like transporter family DIE29_RS12565 PF00773 RNB domain DIE29_RS12575 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DIE29_RS12575 PF01488 Shikimate / quinate 5-dehydrogenase DIE29_RS12575 PF08501 Shikimate dehydrogenase substrate binding domain DIE29_RS12580 PF00912 Transglycosylase DIE29_RS12585 PF00571 CBS domain DIE29_RS12585 PF01769 Divalent cation transporter DIE29_RS12585 PF03448 MgtE intracellular N domain DIE29_RS12670 PF00772 DnaB-like helicase N terminal domain DIE29_RS12670 PF03796 DnaB-like helicase C terminal domain DIE29_RS12675 PF03948 Ribosomal protein L9, C-terminal domain DIE29_RS12675 PF01281 Ribosomal protein L9, N-terminal domain DIE29_RS12680 PF01084 Ribosomal protein S18 DIE29_RS12690 PF01250 Ribosomal protein S6 DIE29_RS12695 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DIE29_RS12695 PF00270 DEAD/DEAH box helicase DIE29_RS12695 PF11898 Domain of unknown function (DUF3418) DIE29_RS12695 PF04408 Helicase associated domain (HA2) DIE29_RS12695 PF00271 Helicase conserved C-terminal domain DIE29_RS12700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DIE29_RS12705 PF00924 Mechanosensitive ion channel DIE29_RS12710 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DIE29_RS12710 PF00749 tRNA synthetases class I (E and Q), catalytic domain DIE29_RS12720 PF02673 Bacitracin resistance protein BacA DIE29_RS12725 PF07690 Major Facilitator Superfamily DIE29_RS12730 PF01479 S4 domain DIE29_RS12730 PF00849 RNA pseudouridylate synthase DIE29_RS12735 PF03334 Na+/H+ antiporter subunit DIE29_RS12740 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DIE29_RS12750 PF00361 Proton-conducting membrane transporter DIE29_RS12755 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DIE29_RS12760 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DIE29_RS12760 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DIE29_RS12760 PF13244 Domain of unknown function (DUF4040) DIE29_RS12760 PF00361 Proton-conducting membrane transporter DIE29_RS12765 PF09339 IclR helix-turn-helix domain DIE29_RS12765 PF01614 Bacterial transcriptional regulator DIE29_RS12770 PF00768 D-alanyl-D-alanine carboxypeptidase DIE29_RS12780 PF01515 Phosphate acetyl/butaryl transferase DIE29_RS12780 PF03949 Malic enzyme, NAD binding domain DIE29_RS12780 PF00390 Malic enzyme, N-terminal domain DIE29_RS12785 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DIE29_RS12785 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DIE29_RS12790 PF00155 Aminotransferase class I and II DIE29_RS12795 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DIE29_RS12795 PF01464 Transglycosylase SLT domain DIE29_RS12800 PF01510 N-acetylmuramoyl-L-alanine amidase DIE29_RS12810 PF00881 Nitroreductase family DIE29_RS12815 PF07685 CobB/CobQ-like glutamine amidotransferase domain DIE29_RS12815 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DIE29_RS12820 PF10414 Sirohaem synthase dimerisation region DIE29_RS12820 PF14824 Sirohaem biosynthesis protein central DIE29_RS12820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DIE29_RS12825 PF00005 ABC transporter DIE29_RS12830 PF01032 FecCD transport family DIE29_RS12835 PF00593 TonB dependent receptor DIE29_RS12835 PF07715 TonB-dependent Receptor Plug Domain DIE29_RS12840 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DIE29_RS12845 PF02277 Phosphoribosyltransferase DIE29_RS12850 PF02654 Cobalamin-5-phosphate synthase DIE29_RS12855 PF00300 Histidine phosphatase superfamily (branch 1) DIE29_RS12860 PF00664 ABC transporter transmembrane region DIE29_RS12860 PF00005 ABC transporter DIE29_RS12865 PF01522 Polysaccharide deacetylase DIE29_RS12870 PF00534 Glycosyl transferases group 1 DIE29_RS12870 PF13439 Glycosyltransferase Family 4 DIE29_RS12875 PF17103 Stealth protein CR4, conserved region 4 DIE29_RS12875 PF17102 Stealth protein CR3, conserved region 3 DIE29_RS12875 PF11380 Stealth protein CR2, conserved region 2 DIE29_RS12875 PF17101 Stealth protein CR1, conserved region 1 DIE29_RS12875 PF00534 Glycosyl transferases group 1 DIE29_RS12880 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DIE29_RS12890 PF00534 Glycosyl transferases group 1 DIE29_RS12890 PF17101 Stealth protein CR1, conserved region 1 DIE29_RS12890 PF11380 Stealth protein CR2, conserved region 2 DIE29_RS12890 PF17103 Stealth protein CR4, conserved region 4 DIE29_RS12890 PF17102 Stealth protein CR3, conserved region 3 DIE29_RS12895 PF00534 Glycosyl transferases group 1 DIE29_RS12900 PF00534 Glycosyl transferases group 1 DIE29_RS12905 PF13439 Glycosyltransferase Family 4 DIE29_RS12905 PF00534 Glycosyl transferases group 1 DIE29_RS12915 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DIE29_RS12915 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DIE29_RS12915 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DIE29_RS12920 PF01467 Cytidylyltransferase-like DIE29_RS12920 PF00294 pfkB family carbohydrate kinase DIE29_RS12925 PF13609 Gram-negative porin DIE29_RS12935 PF05685 Putative restriction endonuclease DIE29_RS12940 PF00733 Asparagine synthase DIE29_RS12940 PF13537 Glutamine amidotransferase domain DIE29_RS12945 PF00114 Pilin (bacterial filament) DIE29_RS12945 PF07963 Prokaryotic N-terminal methylation motif DIE29_RS12955 PF00535 Glycosyl transferase family 2 DIE29_RS12960 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DIE29_RS12970 PF00132 Bacterial transferase hexapeptide (six repeats) DIE29_RS12995 PF03551 Transcriptional regulator PadR-like family DIE29_RS12995 PF13847 Methyltransferase domain DIE29_RS13000 PF00072 Response regulator receiver domain DIE29_RS13000 PF00158 Sigma-54 interaction domain DIE29_RS13000 PF02954 Bacterial regulatory protein, Fis family DIE29_RS13005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS13005 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS13015 PF00155 Aminotransferase class I and II DIE29_RS13020 PF01008 Initiation factor 2 subunit family DIE29_RS13025 PF00596 Class II Aldolase and Adducin N-terminal domain DIE29_RS13030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DIE29_RS13030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DIE29_RS13035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DIE29_RS13035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DIE29_RS13040 PF02885 Glycosyl transferase family, helical bundle domain DIE29_RS13045 PF02600 Disulfide bond formation protein DsbB DIE29_RS13055 PF01609 Transposase DDE domain DIE29_RS13055 PF13808 DDE_Tnp_1-associated DIE29_RS13065 PF07238 PilZ domain DIE29_RS13065 PF03552 Cellulose synthase DIE29_RS13065 PF00535 Glycosyl transferase family 2 DIE29_RS13075 PF01270 Glycosyl hydrolases family 8 DIE29_RS13080 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) DIE29_RS13085 PF07238 PilZ domain DIE29_RS13090 PF04055 Radical SAM superfamily DIE29_RS13090 PF08497 Radical SAM N-terminal DIE29_RS13090 PF11842 Domain of unknown function (DUF3362) DIE29_RS13095 PF00873 AcrB/AcrD/AcrF family DIE29_RS13105 PF00211 Adenylate and Guanylate cyclase catalytic domain DIE29_RS13105 PF16701 Adenylate cyclase regulatory domain DIE29_RS13115 PF01168 Alanine racemase, N-terminal domain DIE29_RS13115 PF00842 Alanine racemase, C-terminal domain DIE29_RS13125 PF03918 Cytochrome C biogenesis protein DIE29_RS13130 PF08534 Redoxin DIE29_RS13135 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DIE29_RS13135 PF01578 Cytochrome C assembly protein DIE29_RS13140 PF03100 CcmE DIE29_RS13150 PF01578 Cytochrome C assembly protein DIE29_RS13155 PF03379 CcmB protein DIE29_RS13160 PF00005 ABC transporter DIE29_RS13165 PF03264 NapC/NirT cytochrome c family, N-terminal region DIE29_RS13170 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DIE29_RS13175 PF12801 4Fe-4S binding domain DIE29_RS13175 PF12837 4Fe-4S binding domain DIE29_RS13180 PF12800 4Fe-4S binding domain DIE29_RS13180 PF12838 4Fe-4S dicluster domain DIE29_RS13185 PF01568 Molydopterin dinucleotide binding domain DIE29_RS13185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DIE29_RS13185 PF00384 Molybdopterin oxidoreductase DIE29_RS13195 PF12800 4Fe-4S binding domain DIE29_RS13195 PF12838 4Fe-4S dicluster domain DIE29_RS13200 PF00196 Bacterial regulatory proteins, luxR family DIE29_RS13200 PF00072 Response regulator receiver domain DIE29_RS13205 PF07730 Histidine kinase DIE29_RS13205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS13205 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DIE29_RS13205 PF00672 HAMP domain DIE29_RS13215 PF00929 Exonuclease DIE29_RS13225 PF02824 TGS domain DIE29_RS13225 PF04607 Region found in RelA / SpoT proteins DIE29_RS13225 PF13291 ACT domain DIE29_RS13230 PF01192 RNA polymerase Rpb6 DIE29_RS13235 PF00625 Guanylate kinase DIE29_RS13240 PF03755 YicC-like family, N-terminal region DIE29_RS13240 PF08340 Domain of unknown function (DUF1732) DIE29_RS13245 PF13191 AAA ATPase domain DIE29_RS13245 PF00069 Protein kinase domain DIE29_RS13255 PF03725 3' exoribonuclease family, domain 2 DIE29_RS13255 PF01138 3' exoribonuclease family, domain 1 DIE29_RS13260 PF01725 Ham1 family DIE29_RS13265 PF06969 HemN C-terminal domain DIE29_RS13265 PF04055 Radical SAM superfamily DIE29_RS13270 PF01343 Peptidase family S49 DIE29_RS13275 PF02390 Putative methyltransferase DIE29_RS13280 PF05690 Thiazole biosynthesis protein ThiG DIE29_RS13285 PF05690 Thiazole biosynthesis protein ThiG DIE29_RS13285 PF02597 ThiS family DIE29_RS13305 PF00989 PAS fold DIE29_RS13305 PF11808 Phosphate regulon sensor protein PhoR DIE29_RS13305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS13305 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS13310 PF00072 Response regulator receiver domain DIE29_RS13310 PF00486 Transcriptional regulatory protein, C terminal DIE29_RS13320 PF01209 ubiE/COQ5 methyltransferase family DIE29_RS13335 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DIE29_RS13335 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DIE29_RS13340 PF02874 ATP synthase alpha/beta family, beta-barrel domain DIE29_RS13340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DIE29_RS13345 PF00231 ATP synthase DIE29_RS13350 PF02874 ATP synthase alpha/beta family, beta-barrel domain DIE29_RS13350 PF00306 ATP synthase alpha/beta chain, C terminal domain DIE29_RS13350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DIE29_RS13355 PF00213 ATP synthase delta (OSCP) subunit DIE29_RS13360 PF00430 ATP synthase B/B' CF(0) DIE29_RS13365 PF00137 ATP synthase subunit C DIE29_RS13370 PF00119 ATP synthase A chain DIE29_RS13380 PF17762 HTH domain found in ParB protein DIE29_RS13380 PF02195 ParB-like nuclease domain DIE29_RS13385 PF13614 AAA domain DIE29_RS13390 PF02527 rRNA small subunit methyltransferase G DIE29_RS13395 PF13932 GidA associated domain DIE29_RS13395 PF01134 Glucose inhibited division protein A DIE29_RS13400 PF00892 EamA-like transporter family DIE29_RS13405 PF12833 Helix-turn-helix domain DIE29_RS13410 PF01037 Lrp/AsnC ligand binding domain DIE29_RS13415 PF00682 HMGL-like DIE29_RS13415 PF08502 LeuA allosteric (dimerisation) domain DIE29_RS13420 PF02441 Flavoprotein DIE29_RS13445 PF13175 AAA ATPase domain DIE29_RS13450 PF12320 Type 5 capsule protein repressor C-terminal domain DIE29_RS13450 PF00149 Calcineurin-like phosphoesterase DIE29_RS13455 PF08534 Redoxin DIE29_RS13465 PF00593 TonB dependent receptor DIE29_RS13465 PF07715 TonB-dependent Receptor Plug Domain DIE29_RS13495 PF07715 TonB-dependent Receptor Plug Domain DIE29_RS13495 PF00593 TonB dependent receptor DIE29_RS13500 PF00163 Ribosomal protein S4/S9 N-terminal domain DIE29_RS13500 PF01479 S4 domain DIE29_RS13520 PF02514 CobN/Magnesium Chelatase DIE29_RS13525 PF00593 TonB dependent receptor DIE29_RS13525 PF07715 TonB-dependent Receptor Plug Domain DIE29_RS13545 PF00667 FAD binding domain DIE29_RS13545 PF00175 Oxidoreductase NAD-binding domain DIE29_RS13545 PF00258 Flavodoxin DIE29_RS13565 PF07715 TonB-dependent Receptor Plug Domain DIE29_RS13565 PF00593 TonB dependent receptor DIE29_RS13570 PF02321 Outer membrane efflux protein DIE29_RS13575 PF02687 FtsX-like permease family DIE29_RS13575 PF12704 MacB-like periplasmic core domain DIE29_RS13575 PF00005 ABC transporter DIE29_RS13580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DIE29_RS13585 PF01475 Ferric uptake regulator family DIE29_RS13590 PF02472 Biopolymer transport protein ExbD/TolR DIE29_RS13595 PF01618 MotA/TolQ/ExbB proton channel family DIE29_RS13600 PF03544 Gram-negative bacterial TonB protein C-terminal DIE29_RS13605 PF00210 Ferritin-like domain DIE29_RS13610 PF04324 BFD-like [2Fe-2S] binding domain DIE29_RS13620 PF01557 Fumarylacetoacetate (FAA) hydrolase family DIE29_RS13630 PF00753 Metallo-beta-lactamase superfamily DIE29_RS13635 PF00005 ABC transporter DIE29_RS13635 PF03459 TOBE domain DIE29_RS13640 PF00528 Binding-protein-dependent transport system inner membrane component DIE29_RS13650 PF03459 TOBE domain DIE29_RS13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS13660 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DIE29_RS13660 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DIE29_RS13665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS13665 PF03459 TOBE domain DIE29_RS13675 PF13538 UvrD-like helicase C-terminal domain DIE29_RS13680 PF13361 UvrD-like helicase C-terminal domain DIE29_RS13680 PF12705 PD-(D/E)XK nuclease superfamily DIE29_RS13680 PF00580 UvrD/REP helicase N-terminal domain DIE29_RS13685 PF00672 HAMP domain DIE29_RS13685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DIE29_RS13685 PF17200 Single Cache domain 2 DIE29_RS13690 PF00563 EAL domain DIE29_RS13690 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS13690 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS13695 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS13695 PF08446 PAS fold DIE29_RS13695 PF00360 Phytochrome region DIE29_RS13695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS13695 PF01590 GAF domain DIE29_RS13710 PF02834 LigT like Phosphoesterase DIE29_RS13715 PF07690 Major Facilitator Superfamily DIE29_RS13725 PF05343 M42 glutamyl aminopeptidase DIE29_RS13730 PF08245 Mur ligase middle domain DIE29_RS13730 PF02875 Mur ligase family, glutamate ligase domain DIE29_RS13730 PF08443 RimK-like ATP-grasp domain DIE29_RS13735 PF13537 Glutamine amidotransferase domain DIE29_RS13735 PF00733 Asparagine synthase DIE29_RS13740 PF00586 AIR synthase related protein, N-terminal domain DIE29_RS13740 PF02769 AIR synthase related protein, C-terminal domain DIE29_RS13745 PF04608 Phosphatidylglycerophosphatase A DIE29_RS13750 PF02464 Competence-damaged protein DIE29_RS13755 PF00154 recA bacterial DNA recombination protein DIE29_RS13760 PF02631 RecX family DIE29_RS13765 PF12399 Branched-chain amino acid ATP-binding cassette transporter DIE29_RS13765 PF00005 ABC transporter DIE29_RS13770 PF04552 Sigma-54, DNA binding domain DIE29_RS13770 PF04963 Sigma-54 factor, core binding domain DIE29_RS13770 PF00309 Sigma-54 factor, Activator interacting domain (AID) DIE29_RS13775 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DIE29_RS13780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DIE29_RS13785 PF02603 HPr Serine kinase N terminus DIE29_RS13785 PF07475 HPr Serine kinase C-terminal domain DIE29_RS13790 PF00072 Response regulator receiver domain DIE29_RS13790 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS13795 PF00585 C-terminal regulatory domain of Threonine dehydratase DIE29_RS13795 PF00291 Pyridoxal-phosphate dependent enzyme DIE29_RS13800 PF00497 Bacterial extracellular solute-binding proteins, family 3 DIE29_RS13805 PF08448 PAS fold DIE29_RS13805 PF13426 PAS domain DIE29_RS13805 PF00563 EAL domain DIE29_RS13805 PF05231 MASE1 DIE29_RS13805 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS13805 PF08447 PAS fold DIE29_RS13810 PF01812 5-formyltetrahydrofolate cyclo-ligase family DIE29_RS13825 PF12627 Probable RNA and SrmB- binding site of polymerase A DIE29_RS13825 PF01743 Poly A polymerase head domain DIE29_RS13825 PF01966 HD domain DIE29_RS13830 PF00873 AcrB/AcrD/AcrF family DIE29_RS13845 PF02321 Outer membrane efflux protein DIE29_RS13845 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DIE29_RS13850 PF00873 AcrB/AcrD/AcrF family DIE29_RS13855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DIE29_RS13855 PF00529 HlyD membrane-fusion protein of T1SS DIE29_RS13860 PF00440 Bacterial regulatory proteins, tetR family DIE29_RS13860 PF13977 BetI-type transcriptional repressor, C-terminal DIE29_RS13865 PF00593 TonB dependent receptor DIE29_RS13865 PF07715 TonB-dependent Receptor Plug Domain DIE29_RS13880 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS13880 PF00563 EAL domain DIE29_RS13880 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS13890 PF08240 Alcohol dehydrogenase GroES-like domain DIE29_RS13890 PF00107 Zinc-binding dehydrogenase DIE29_RS13895 PF00440 Bacterial regulatory proteins, tetR family DIE29_RS13895 PF16925 Tetracyclin repressor-like, C-terminal domain DIE29_RS13910 PF12557 Cob(I)alamin adenosyltransferase N terminal DIE29_RS13910 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DIE29_RS13915 PF07683 Cobalamin synthesis protein cobW C-terminal domain DIE29_RS13915 PF02492 CobW/HypB/UreG, nucleotide-binding domain DIE29_RS13920 PF02514 CobN/Magnesium Chelatase DIE29_RS13925 PF07728 AAA domain (dynein-related subfamily) DIE29_RS13925 PF13519 von Willebrand factor type A domain DIE29_RS13925 PF17863 AAA lid domain DIE29_RS13940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DIE29_RS13945 PF02570 Precorrin-8X methylmutase DIE29_RS13950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DIE29_RS13955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DIE29_RS13960 PF02571 Precorrin-6x reductase CbiJ/CobK DIE29_RS13965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DIE29_RS13975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DIE29_RS13980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DIE29_RS13995 PF01494 FAD binding domain DIE29_RS14015 PF14497 Glutathione S-transferase, C-terminal domain DIE29_RS14015 PF02798 Glutathione S-transferase, N-terminal domain DIE29_RS14025 PF00156 Phosphoribosyl transferase domain DIE29_RS14035 PF00860 Permease family DIE29_RS14040 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS14040 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS14040 PF00563 EAL domain DIE29_RS14045 PF03372 Endonuclease/Exonuclease/phosphatase family DIE29_RS14050 PF00156 Phosphoribosyl transferase domain DIE29_RS14060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DIE29_RS14060 PF00384 Molybdopterin oxidoreductase DIE29_RS14060 PF01568 Molydopterin dinucleotide binding domain DIE29_RS14065 PF02146 Sir2 family DIE29_RS14075 PF01042 Endoribonuclease L-PSP DIE29_RS14085 PF01565 FAD binding domain DIE29_RS14085 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DIE29_RS14100 PF00982 Glycosyltransferase family 20 DIE29_RS14100 PF05116 Sucrose-6F-phosphate phosphohydrolase DIE29_RS14105 PF12399 Branched-chain amino acid ATP-binding cassette transporter DIE29_RS14105 PF00005 ABC transporter DIE29_RS14110 PF00005 ABC transporter DIE29_RS14115 PF02653 Branched-chain amino acid transport system / permease component DIE29_RS14120 PF11862 Domain of unknown function (DUF3382) DIE29_RS14120 PF02653 Branched-chain amino acid transport system / permease component DIE29_RS14125 PF13458 Periplasmic binding protein DIE29_RS14130 PF00497 Bacterial extracellular solute-binding proteins, family 3 DIE29_RS14135 PF00528 Binding-protein-dependent transport system inner membrane component DIE29_RS14140 PF00528 Binding-protein-dependent transport system inner membrane component DIE29_RS14145 PF00005 ABC transporter DIE29_RS14155 PF07075 Protein of unknown function (DUF1343) DIE29_RS14160 PF01740 STAS domain DIE29_RS14160 PF00916 Sulfate permease family DIE29_RS14165 PF00085 Thioredoxin DIE29_RS14170 PF03466 LysR substrate binding domain DIE29_RS14170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS14175 PF07690 Major Facilitator Superfamily DIE29_RS14180 PF18395 Cas3 C-terminal domain DIE29_RS14180 PF18019 HD domain DIE29_RS14185 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) DIE29_RS14190 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) DIE29_RS14195 PF09344 CT1975-like protein DIE29_RS14200 PF09704 CRISPR-associated protein (Cas_Cas5) DIE29_RS14205 PF08798 CRISPR associated protein DIE29_RS14215 PF01867 CRISPR associated protein Cas1 DIE29_RS14220 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) DIE29_RS14230 PF02310 B12 binding domain DIE29_RS14230 PF02574 Homocysteine S-methyltransferase DIE29_RS14230 PF02965 Vitamin B12 dependent methionine synthase, activation domain DIE29_RS14230 PF02607 B12 binding domain DIE29_RS14230 PF00809 Pterin binding enzyme DIE29_RS14240 PF12399 Branched-chain amino acid ATP-binding cassette transporter DIE29_RS14240 PF00005 ABC transporter DIE29_RS14245 PF00005 ABC transporter DIE29_RS14250 PF07690 Major Facilitator Superfamily DIE29_RS14255 PF01078 Magnesium chelatase, subunit ChlI DIE29_RS14255 PF13335 Magnesium chelatase, subunit ChlI C-terminal DIE29_RS14260 PF04380 Membrane fusogenic activity DIE29_RS14270 PF00543 Nitrogen regulatory protein P-II DIE29_RS14275 PF00909 Ammonium Transporter Family DIE29_RS14280 PF00551 Formyl transferase DIE29_RS14290 PF12848 ABC transporter DIE29_RS14290 PF00005 ABC transporter DIE29_RS14300 PF01323 DSBA-like thioredoxin domain DIE29_RS14310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DIE29_RS14310 PF03466 LysR substrate binding domain DIE29_RS14315 PF00892 EamA-like transporter family DIE29_RS14320 PF02424 ApbE family DIE29_RS14325 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DIE29_RS14325 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DIE29_RS14335 PF07669 Eco57I restriction-modification methylase DIE29_RS14335 PF12950 TaqI-like C-terminal specificity domain DIE29_RS14345 PF16325 Peptidase family U32 C-terminal domain DIE29_RS14345 PF01136 Peptidase family U32 DIE29_RS14350 PF05958 tRNA (Uracil-5-)-methyltransferase DIE29_RS14355 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS14365 PF00005 ABC transporter DIE29_RS14365 PF12848 ABC transporter DIE29_RS14380 PF01384 Phosphate transporter family DIE29_RS14385 PF03610 PTS system fructose IIA component DIE29_RS14390 PF00381 PTS HPr component phosphorylation site DIE29_RS14395 PF00391 PEP-utilising enzyme, mobile domain DIE29_RS14395 PF02896 PEP-utilising enzyme, TIM barrel domain DIE29_RS14395 PF05524 PEP-utilising enzyme, N-terminal DIE29_RS14400 PF00561 alpha/beta hydrolase fold DIE29_RS14405 PF07021 Methionine biosynthesis protein MetW DIE29_RS14405 PF00561 alpha/beta hydrolase fold DIE29_RS14415 PF00563 EAL domain DIE29_RS14415 PF00990 Diguanylate cyclase, GGDEF domain DIE29_RS14415 PF03707 Bacterial signalling protein N terminal repeat DIE29_RS14425 PF00484 Carbonic anhydrase DIE29_RS14430 PF00480 ROK family DIE29_RS14435 PF17764 3′ DNA-binding domain (3′BD) DIE29_RS14435 PF18074 Primosomal protein N C-terminal domain DIE29_RS14435 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DIE29_RS14435 PF00271 Helicase conserved C-terminal domain DIE29_RS14435 PF00270 DEAD/DEAH box helicase DIE29_RS14440 PF01208 Uroporphyrinogen decarboxylase (URO-D) DIE29_RS14445 PF02386 Cation transport protein DIE29_RS14450 PF02254 TrkA-N domain DIE29_RS14450 PF02080 TrkA-C domain DIE29_RS14455 PF02954 Bacterial regulatory protein, Fis family DIE29_RS14455 PF00072 Response regulator receiver domain DIE29_RS14455 PF00158 Sigma-54 interaction domain DIE29_RS14460 PF00672 HAMP domain DIE29_RS14460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DIE29_RS14460 PF00512 His Kinase A (phospho-acceptor) domain DIE29_RS14460 PF00989 PAS fold DIE29_RS14470 PF01189 16S rRNA methyltransferase RsmB/F DIE29_RS14470 PF01029 NusB family DIE29_RS14475 PF17284 Spermidine synthase tetramerisation domain DIE29_RS14480 PF02675 S-adenosylmethionine decarboxylase DIE29_RS14485 PF01925 Sulfite exporter TauE/SafE DIE29_RS14490 PF01926 50S ribosome-binding GTPase DIE29_RS14490 PF10396 GTP-binding protein TrmE N-terminus DIE29_RS14490 PF12631 MnmE helical domain DIE29_RS14495 PF14849 YidC periplasmic domain DIE29_RS14495 PF02096 60Kd inner membrane protein DIE29_RS14500 PF00825 Ribonuclease P DIE29_RS14505 PF00468 Ribosomal protein L34