Name	ID	Position	Strand	Score	Sequence
P_0001	NW_.TheileriaorientalisstrainShintokumitochondrialDNA	SigmaN16.pfm	1201	-	10.3892216106
P_0117	NC_025260.1	715733	+	9.12153749663	tataatatgtgttagtgaaatttaaaat
P_0370	NC_025260.1	2037606	+	9.78497243214	ttaacaaggaattaagaaaaaatataat
P_0375	NC_025260.1	2095122	+	9.36345307782	tttaaaccATTATATGATGCGATAGAAT
P_0386	NC_025260.1	2191157	+	9.57661539705	ttgaaTTTCGCAACATTTGAAATATTAT
P_0393	NC_025260.1	2231680	+	11.9437198444	tttacattaaatcattaaaagatataat
P_0395	NC_025260.1	2253702	-	10.182920219	tatacaatacaCTGAgataaattataat
P_0396	NC_025260.1	2253704	+	9.1028462371	tataatttatcTCAGtgtattgtataat
P_0397	NC_025260.1	2268305	-	9.54673127249	TTTACTTCAATCCTAATACGGATACATT
P_0398	NC_025260.1	2271988	-	9.4383852124	tttacaatgtgtatttgtttcaCATAAT
P_0399	NC_025260.1	2278875	+	9.12153749663	tataatatgtatataaaatatataaaat
P_0403	NC_025260.1	2305504	-	11.1928153094	TTGAAATTTACAAGACGCTTAGTAAAAT
P_0409	NC_025260.1	2351129	-	10.622779769	TTGAATCTTATCATAATTTCGCTAGAAT
P_0410	NC_025260.1	2351526	+	9.1028462371	tataataaatgatatatatgaatataat
P_0413	NC_025260.1	2382460	+	10.4919683107	TTGACTCGGCataaaatcaatttaaatt
P_0414	NC_025260.1	2388830	-	10.8636458625	tttaattcttttatattacaattataat
P_0416	NC_025260.1	2414042	+	9.23264161956	tttacacacgGACTCATATctctaaatt
P_0419	NC_025260.1	2422694	-	10.2016114786	tatacacatatgagtaattttgtaaaat
P_0420	NC_025260.1	2422696	+	9.72466489736	tttacaaaattactcatatgtgtatact
P_0422	NC_025260.1	2452381	-	11.1498048904	TTGactatattttacaatattataagat
P_0423	NC_025260.1	2452917	+	9.90643993591	tagaattttaatgtttaagaaataaaat
P_0429	NC_025260.1	2483753	+	9.04280282212	TTGAATTCGTTTACCCACATCGTAAAGT
P_0431	NC_025260.1	2485614	-	10.3316337118	ttgactgttaatatttatattgtacatt
P_0432	NC_025260.1	2489841	-	10.3892216106	tttaaaaccaTATAAATACTGttataat
P_0433	NC_025260.1	2500345	+	9.1028462371	TATAATAATGGTTtatatgaaatataat
P_0435	NC_025260.1	2512006	-	10.2045678522	tttactaacTGCCAACACATCGTACTAT
P_0436	NC_025260.1	2512447	+	9.07230702061	tttacaatacttttaaattctttacatt
P_0440	NC_025260.1	2541289	-	9.28180220578	TGGAATGATTAACATGATGTAATATaat
P_0441	NC_025260.1	2541355	+	10.3892216106	tttaaaaaaatagctaaaatattataat
P_0442	NC_025260.1	2544025	+	10.882337122	tttaatttgatataaaaattaataaaat
P_0447	NC_025260.1	2554606	+	9.9988527993	TTGACATGGCTCgttaacaaattatatt
P_0448	NC_025260.1	2557897	-	12.2765007569	TTTACTAGATATAAGctaaatttacaat
P_0451	NC_025260.1	2569517	+	9.12153749663	tataataattttaatttcgGATTAAAAT
P_0454	NC_025260.1	2586854	-	9.37396173101	tttactataaTATTCCATGTGTGATAAT
P_0456	NC_025260.1	2605647	-	9.22319196313	TAGactttatatgtttataaattatact
P_0457	NC_025260.1	2612571	-	9.64332909273	ttaacacatttaatgTGGCATATACAAt
P_0459	NC_025260.1	2615510	-	9.30049346532	TGGAATCAACGTACTTTGTTTCtaaaat
P_0461	NC_025260.1	2651905	-	9.25309214738	TCTacaatttatcaaattataatacaat
P_0463	NC_025260.1	2655010	-	9.23264161956	tttacaaactattttacagttttaaatt
P_0464	NC_025260.1	2655012	+	10.4079128701	tttaaaactgtaaaatagtttgtaaaat
P_0466	NC_025260.1	2661586	+	9.8378773297	tttaatttataaactttaTGTTTAgaat
P_0469	NC_025260.1	2680857	-	11.1311136309	TTGACTCAGTCgatattatttgtattat
P_0470	NC_025260.1	2685337	+	10.2016114786	TATACATAATAAAActgtaacataaaat
P_0471	NC_025260.1	2686583	-	9.21395036002	ttTACATTCTATTAGACACatctatatt
P_0473	NC_025260.1	2696503	+	9.88774867637	TAGAAtaagaattaaaataatttataat
P_0475	NC_025260.1	2705771	-	9.73014360029	tttacacatttgtattgtaatttactat
P_0477	NC_025260.1	2719201	-	10.3892216106	TTTAAATCGTACGGCACGCTTCTATAAT
P_0478	NC_025260.1	2719578	+	9.43201568403	TAGAAATTATATGGAAGATAGTTAAAAT
P_0479	NC_025260.1	2722990	+	11.1498048904	TTGACTTAAACAATTGCCtgtttaatat
P_0482	NC_025260.1	2732591	+	9.39719851376	TTGACTTGTGATACCCCAGCCATATCAT
P_0485	NC_025260.1	2741086	+	9.21987055197	tttactatataatatccgtttaaataat
P_0486	NC_025260.1	2741133	-	9.80366369168	TTAACAgtcaaaaaatatcaactaaaat
P_0487	NC_025260.1	2743842	-	9.27312139479	TTTAAGGTTTTAGATTGtagagtaaaat
P_0831	NC_025260.1	2209725	-	9.86915973868	TCtactaaaataatatcatacaatataat
P_0833	NC_025260.1	2219820	-	10.8636458625	tttaattttcctAACCTTCCAcgtataat
P_0836	NC_025260.1	2247006	+	9.36345307782	tttaaatctatttataaaaaacatagaat
P_0837	NC_025260.1	2247152	+	9.41332442449	TAGAAATACGCATACATTAcaagtataat
P_0843	NC_025260.1	2287440	-	9.3947354868	TCTACAAATATCAATCGAGTACTTATAAT
P_0844	NC_025260.1	2297902	-	9.72466489736	tttacagcaccatttaattttattatact
P_0845	NC_025260.1	2297904	+	9.12153749663	tataataaaattaaatggtgctgtaaaat
P_0846	NC_025260.1	2305661	-	11.1741240499	TTGAAAACCACGAAGAGTCAGGGTATAAT
P_0850	NC_025260.1	2331361	-	10.9678226583	tagacaaatttatttacacataatataat
P_0851	NC_025260.1	2331501	-	9.21395036002	TTTACAGCattaattttgtaatatatatt
P_0852	NC_025260.1	2337411	-	11.0324807105	ttgaaataaaaacacaaaatatgtacaat
P_0853	NC_025260.1	2354209	-	12.4368353558	TTTACTACACGTGTATTAACAGTTAAAAT
P_0855	NC_025260.1	2368871	-	10.6573444709	tatacttttaaattaatagtttttataat
P_0856	NC_025260.1	2368919	-	10.259396684	ttaacTTGACTGATGTGGTGTGTTATAAT
P_0857	NC_025260.1	2392922	+	9.8717869397	TTTACAATTTACGCCTAATTCTATATGAT
P_0858	NC_025260.1	2399609	+	9.80366369168	ttaacattctGGAAAggattatataaaat
P_0859	NC_025260.1	2399859	-	9.23264161956	TTTACATCATTGCagtttttttttaaatt
P_0861	NC_025260.1	2404445	-	10.182920219	tatacacacatttgaccatatattataat
P_0862	NC_025260.1	2404447	+	9.1028462371	tataatatatggtcaaatgtgtgtataat
P_0863	NC_025260.1	2413895	-	10.5786097964	TTGACTGTTGTACCAACTCAATATATAGT
P_0866	NC_025260.1	2431295	-	9.89047819924	tttacatatatgaACCtttcaaataatat
P_0867	NC_025260.1	2452201	-	9.21395036002	tttacacataaaacaaaaacatatatatt
P_0868	NC_025260.1	2458370	+	9.73014360029	tttACATCGTAATAAACACTGTATACGAT
P_0870	NC_025260.1	2471596	-	9.4383852124	tttacaaaaaattaagcaAATAACATAAT
P_0876	NC_025260.1	2490004	-	10.4079128701	tttaaaataattgatcatgtttgtaaaat
P_0878	NC_025260.1	2509020	-	10.3462111916	tttactgttttcatcacattttgtattat
P_0879	NC_025260.1	2510440	-	10.882337122	tttaatttgctATTTAATTGTTGTAAAAT
P_0883	NC_025260.1	2525478	-	10.6753806385	TTGACAGGACTGTTTCGGACATCTAATAT
P_0886	NC_025260.1	2541381	-	9.8717869397	tttacaagATAAACATcttattgtattat
P_0888	NC_025260.1	2546594	-	9.1028462371	tataatacaaatactaACTGATCTATAAT
P_0889	NC_025260.1	2547954	-	9.9983452184	TTTACCGTACAgcttattatacatataat
P_0890	NC_025260.1	2550910	-	9.89047819924	tttacactaCTTCAGAGCATACTTAATAT
P_0891	NC_025260.1	2554631	-	9.27312139479	tttaagtaaatttgttccgaaaataaaat
P_0894	NC_025260.1	2569442	+	9.43533040902	tgtacaataaatatCCCAGCGTTTAcaat
P_0895	NC_025260.1	2571988	-	9.23264161956	tttacacatttgtataatattcgtaaatt
P_0896	NC_025260.1	2574310	-	10.3462111916	tttactataaacaatagtatatatattat
P_0899	NC_025260.1	2586203	-	11.6485483018	ttgaatataaaGTCCAATATGACtataat
P_0900	NC_025260.1	2586447	-	9.21395036002	tttacacatcaaataaaatttaatatatt
P_0901	NC_025260.1	2612183	+	10.3892216106	tttaaattaaaataaattaaaaatataat
P_0903	NC_025260.1	2615772	+	9.57661539705	ttgaattaaattataagtatatttattat
P_0904	NC_025260.1	2647534	+	9.389005265	tagactgaaaaacaaacaaatattaatat
P_0906	NC_025260.1	2661387	-	10.2475782712	tttaaaaaataataacatatatgtacaat
P_0907	NC_025260.1	2661685	+	9.28180220578	TGGAATCTTTTCTGAATTGAACTTATAAT
P_0908	NC_025260.1	2661850	-	11.9437198444	tttacataacaAAAACGGCTTTATATAAT
P_0909	NC_025260.1	2674612	-	9.6883746119	tttacttttacctATCTttcaattatatt
P_0910	NC_025260.1	2674614	+	9.12153749663	tataattgaaAGATaggtaaaagtaaaat
P_0911	NC_025260.1	2684521	-	11.1928153094	TTGAAATCAGATTTTTTTTCACttaaaat
P_0912	NC_025260.1	2692370	-	11.7028537509	TTGACATCCATTTCGACAATATGTAGAAT
P_0913	NC_025260.1	2696442	-	9.10219114517	ttgaaatatatttttatgtacaatattat
P_0914	NC_025260.1	2700902	-	10.882337122	tttaataaaaatctttagttatttaaaat
P_0915	NC_025260.1	2703196	+	11.6672395613	ttgaattttaaaatctgataaaataaaat
P_0916	NC_025260.1	2708599	+	10.882337122	tttaatttaatgaaaGCAAAGCgtaaaat
P_0918	NC_025260.1	2713553	-	9.8717869397	tttacatttaaacttcacttttttattat
P_0919	NC_025260.1	2726816	+	9.59566500797	tgtacaatatttttaaaatatattaaaat
P_0922	NC_025260.1	2734213	+	9.6883746119	tttactatTACCATGGAATCGCATATAtt
P_0923	NC_025260.1	2735439	+	11.1741240499	ttGAAATACAGGAAGTTCATCCATATAAT
P_0924	NC_025260.1	2740559	-	11.802076505	TTTACAAGACTTTTAATTGAATTTACAAT
P_1041	NC_025260.1	715729	-	10.4079128701	tttaaatttcactaacacatattataaaat
P_1240	NC_025260.1	2067430	+	11.802076505	tttacacacttgttCATGCACACTTACAAT
P_1255	NC_025260.1	2192470	-	9.90643993591	TAGAATGCTATAATGgagataaaataaaat
P_1256	NC_025260.1	2192566	-	9.24188322266	TAGACtcgattaaaatattaaacctaaact
P_1257	NC_025260.1	2209838	+	10.4079128701	tttaaagcTGATATAATtctataataaaat
P_1259	NC_025260.1	2229258	-	10.0412768796	tatacaaacgtgataacattttattacaat
P_1262	NC_025260.1	2247471	-	9.45707647194	TTTACACAAATGGCAAGAAAGAAACAAAAT
P_1264	NC_025260.1	2265678	+	9.1028462371	TATAATAGCCGTTCTATTAATTGTTATAAT
P_1265	NC_025260.1	2265753	-	11.6125220679	TTGACGATAAATTAACCAtgagaataaaat
P_1267	NC_025260.1	2284107	+	9.389005265	TAGactgtttattattaattttattaatat
P_1268	NC_025260.1	2286126	-	10.4079128701	tttaaaattaatttaattaatacataaaat
P_1269	NC_025260.1	2288033	-	9.6520640177	tttactattttattacattacATTTACAGT
P_1277	NC_025260.1	2331348	-	11.802076505	tttacacataatataattttattatacaat
P_1278	NC_025260.1	2331767	-	10.3892216106	tttaaaatatataaattttaaagatataat
P_1279	NC_025260.1	2351552	-	9.78497243214	ttaacatatttagtttatttcatgtataat
P_1282	NC_025260.1	2359354	-	10.7220025231	tttaatttttatatattttaccattacaat
P_1283	NC_025260.1	2359690	-	9.85670187899	TTTACCATACATATGTTCCTGCCCTACAAT
P_1284	NC_025260.1	2367303	-	9.80366369168	ttaacaaatagGTGATTTAACACGTAAAAT
P_1285	NC_025260.1	2388378	+	10.622779769	ttgaataataaaaattgaagaagATAGAAT
P_1286	NC_025260.1	2388614	-	10.0513980003	TGTACTCTTTGGTCCcctataaattataat
P_1287	NC_025260.1	2388724	-	10.2177804088	tttactttttttttaaattttcttTAAACT
P_1288	NC_025260.1	2390351	+	10.0412768796	tatacatttacacatgaACATGTATACAAT
P_1289	NC_025260.1	2390513	-	9.8717869397	TTTACATGGTTTTTGTACGTTTTGTATGAT
P_1290	NC_025260.1	2415069	-	10.3462111916	TTTActcattaaaattaacatttttattat
P_1292	NC_025260.1	2439883	+	9.30049346532	tggaATCTTAGTGTGTTgagaatataaaat
P_1293	NC_025260.1	2439960	-	9.6883746119	tttactcaatttattttattcatttatatt
P_1294	NC_025260.1	2440082	-	11.962411104	TTTACAAGAGTTAAAGgttatatgtaaaat
P_1295	NC_025260.1	2440084	+	11.962411104	tttacatataacCTTTAACTCTTGTAAAAT
P_1298	NC_025260.1	2462055	+	9.12153749663	TATAATGTAAAGAATACGGATGAGTAAAAT
P_1299	NC_025260.1	2468521	-	9.12153749663	tataatatattttagaaaatgtactaaaat
P_1301	NC_025260.1	2476194	+	10.2016114786	tatacacacatatatgtaaacacataaaat
P_1302	NC_025260.1	2478922	+	10.882337122	tttaataaacattacCGGAAATTCTAAAAT
P_1303	NC_025260.1	2484843	-	10.7220025231	tttaatttatttttcctcGATTGTTacaat
P_1306	NC_025260.1	2512458	+	9.36345307782	tttaaattctttacatttaataattagaat
P_1307	NC_025260.1	2512878	-	11.6672395613	TTGAATTAATACTCTTAaactttataaaat
P_1309	NC_025260.1	2528306	+	9.78497243214	TTAACAAACAATAGAAGATTTGAGTATAAT
P_1311	NC_025260.1	2537586	+	10.8276196286	tttacgAGATCAACAAccaattaataaaat
P_1313	NC_025260.1	2541224	-	10.4079128701	tttaaagtaTTGTACATCTGATTATAAAAT
P_1314	NC_025260.1	2541551	+	11.6672395613	tTGAATAGTTTAAGTACACctttataaaat
P_1315	NC_025260.1	2542199	+	10.2016114786	tatacacacactgtaactaaacaataaaat
P_1316	NC_025260.1	2547016	-	9.89047819924	TTTACATATACGGcggaaaataaataatat
P_1319	NC_025260.1	2557999	+	9.23362815123	ttaactttatcATTCTAATATTAGTAgaat
P_1320	NC_025260.1	2568869	-	10.8636458625	tttaattttactcaatgttctatatataat
P_1321	NC_025260.1	2569493	+	9.25443013525	tttaagtaGATTCCTCAattgatttataat
P_1323	NC_025260.1	2586331	+	9.74610533696	tagaatattttattttcagtaatatacaat
P_1324	NC_025260.1	2586368	-	9.80366369168	ttaacaaataaaagtcgagatgtgtaaaat
P_1327	NC_025260.1	2596596	-	9.57661539705	TTgaatcaaatgtgtaagtggCTCTAtgat
P_1329	NC_025260.1	2600961	-	10.0700892599	tgtactataaacttttcatttatttaaaat
P_1330	NC_025260.1	2615704	-	10.4079128701	tttaaatggCCTTTGTTgttacaataaaat
P_1332	NC_025260.1	2623280	+	9.33797436477	TTTACAGGTAAAATTTCTAGATATTAAAGT
P_1334	NC_025260.1	2651770	-	10.0574458098	tttacttaacCAATTCAACTCCTATACACT
P_1335	NC_025260.1	2654411	+	10.882337122	TTTAATTAGAATCCATAAACTTGGTAAAAT
P_1336	NC_025260.1	2673484	-	9.58302155795	tttacatttattttccacttattttacact
P_1337	NC_025260.1	2685635	-	10.0412768796	TATACAATTTATTCAGTGTTATGTTACAAT
P_1338	NC_025260.1	2703180	+	10.4079128701	tttaaacacatatacattgaattttaaaat
P_1339	NC_025260.1	2703190	+	10.2016114786	tatacattgaattttaaaatctgataaaat
P_1340	NC_025260.1	2704659	+	10.3892216106	tttaaaGAGTAATTTGAAGAAAGGTATAAT
P_1341	NC_025260.1	2708663	-	10.3462111916	tttactaaaaattatcataTTAACTATTAT
P_1342	NC_025260.1	2719583	-	12.4181440963	TTTACTGATTTTAACTATCTTCCATATAAT
P_1343	NC_025260.1	2719791	+	9.90643993591	TAGAATGAATGGTGATTTTAGAGCTAAAAT
P_1344	NC_025260.1	2719947	-	10.3649024511	TTTACTGTTTTGTggaaatataattaatat
P_1346	NC_025260.1	2732619	-	10.3892216106	TTTAAAATGGTAGGCAGACAGCTATATAAT
P_1347	NC_025260.1	2733567	-	9.89047819924	tttacacaccaatgataaatataataatat
