Name ID Position Strand Score Sequence P_0001 NW_.TheileriaorientalisstrainShintokumitochondrialDNA SigmaN16.pfm 1201 - 10.3892216106 P_0117 NC_025260.1 715733 + 9.12153749663 tataatatgtgttagtgaaatttaaaat P_0370 NC_025260.1 2037606 + 9.78497243214 ttaacaaggaattaagaaaaaatataat P_0375 NC_025260.1 2095122 + 9.36345307782 tttaaaccATTATATGATGCGATAGAAT P_0386 NC_025260.1 2191157 + 9.57661539705 ttgaaTTTCGCAACATTTGAAATATTAT P_0393 NC_025260.1 2231680 + 11.9437198444 tttacattaaatcattaaaagatataat P_0395 NC_025260.1 2253702 - 10.182920219 tatacaatacaCTGAgataaattataat P_0396 NC_025260.1 2253704 + 9.1028462371 tataatttatcTCAGtgtattgtataat P_0397 NC_025260.1 2268305 - 9.54673127249 TTTACTTCAATCCTAATACGGATACATT P_0398 NC_025260.1 2271988 - 9.4383852124 tttacaatgtgtatttgtttcaCATAAT P_0399 NC_025260.1 2278875 + 9.12153749663 tataatatgtatataaaatatataaaat P_0403 NC_025260.1 2305504 - 11.1928153094 TTGAAATTTACAAGACGCTTAGTAAAAT P_0409 NC_025260.1 2351129 - 10.622779769 TTGAATCTTATCATAATTTCGCTAGAAT P_0410 NC_025260.1 2351526 + 9.1028462371 tataataaatgatatatatgaatataat P_0413 NC_025260.1 2382460 + 10.4919683107 TTGACTCGGCataaaatcaatttaaatt P_0414 NC_025260.1 2388830 - 10.8636458625 tttaattcttttatattacaattataat P_0416 NC_025260.1 2414042 + 9.23264161956 tttacacacgGACTCATATctctaaatt P_0419 NC_025260.1 2422694 - 10.2016114786 tatacacatatgagtaattttgtaaaat P_0420 NC_025260.1 2422696 + 9.72466489736 tttacaaaattactcatatgtgtatact P_0422 NC_025260.1 2452381 - 11.1498048904 TTGactatattttacaatattataagat P_0423 NC_025260.1 2452917 + 9.90643993591 tagaattttaatgtttaagaaataaaat P_0429 NC_025260.1 2483753 + 9.04280282212 TTGAATTCGTTTACCCACATCGTAAAGT P_0431 NC_025260.1 2485614 - 10.3316337118 ttgactgttaatatttatattgtacatt P_0432 NC_025260.1 2489841 - 10.3892216106 tttaaaaccaTATAAATACTGttataat P_0433 NC_025260.1 2500345 + 9.1028462371 TATAATAATGGTTtatatgaaatataat P_0435 NC_025260.1 2512006 - 10.2045678522 tttactaacTGCCAACACATCGTACTAT P_0436 NC_025260.1 2512447 + 9.07230702061 tttacaatacttttaaattctttacatt P_0440 NC_025260.1 2541289 - 9.28180220578 TGGAATGATTAACATGATGTAATATaat P_0441 NC_025260.1 2541355 + 10.3892216106 tttaaaaaaatagctaaaatattataat P_0442 NC_025260.1 2544025 + 10.882337122 tttaatttgatataaaaattaataaaat P_0447 NC_025260.1 2554606 + 9.9988527993 TTGACATGGCTCgttaacaaattatatt P_0448 NC_025260.1 2557897 - 12.2765007569 TTTACTAGATATAAGctaaatttacaat P_0451 NC_025260.1 2569517 + 9.12153749663 tataataattttaatttcgGATTAAAAT P_0454 NC_025260.1 2586854 - 9.37396173101 tttactataaTATTCCATGTGTGATAAT P_0456 NC_025260.1 2605647 - 9.22319196313 TAGactttatatgtttataaattatact P_0457 NC_025260.1 2612571 - 9.64332909273 ttaacacatttaatgTGGCATATACAAt P_0459 NC_025260.1 2615510 - 9.30049346532 TGGAATCAACGTACTTTGTTTCtaaaat P_0461 NC_025260.1 2651905 - 9.25309214738 TCTacaatttatcaaattataatacaat P_0463 NC_025260.1 2655010 - 9.23264161956 tttacaaactattttacagttttaaatt P_0464 NC_025260.1 2655012 + 10.4079128701 tttaaaactgtaaaatagtttgtaaaat P_0466 NC_025260.1 2661586 + 9.8378773297 tttaatttataaactttaTGTTTAgaat P_0469 NC_025260.1 2680857 - 11.1311136309 TTGACTCAGTCgatattatttgtattat P_0470 NC_025260.1 2685337 + 10.2016114786 TATACATAATAAAActgtaacataaaat P_0471 NC_025260.1 2686583 - 9.21395036002 ttTACATTCTATTAGACACatctatatt P_0473 NC_025260.1 2696503 + 9.88774867637 TAGAAtaagaattaaaataatttataat P_0475 NC_025260.1 2705771 - 9.73014360029 tttacacatttgtattgtaatttactat P_0477 NC_025260.1 2719201 - 10.3892216106 TTTAAATCGTACGGCACGCTTCTATAAT P_0478 NC_025260.1 2719578 + 9.43201568403 TAGAAATTATATGGAAGATAGTTAAAAT P_0479 NC_025260.1 2722990 + 11.1498048904 TTGACTTAAACAATTGCCtgtttaatat P_0482 NC_025260.1 2732591 + 9.39719851376 TTGACTTGTGATACCCCAGCCATATCAT P_0485 NC_025260.1 2741086 + 9.21987055197 tttactatataatatccgtttaaataat P_0486 NC_025260.1 2741133 - 9.80366369168 TTAACAgtcaaaaaatatcaactaaaat P_0487 NC_025260.1 2743842 - 9.27312139479 TTTAAGGTTTTAGATTGtagagtaaaat P_0831 NC_025260.1 2209725 - 9.86915973868 TCtactaaaataatatcatacaatataat P_0833 NC_025260.1 2219820 - 10.8636458625 tttaattttcctAACCTTCCAcgtataat P_0836 NC_025260.1 2247006 + 9.36345307782 tttaaatctatttataaaaaacatagaat P_0837 NC_025260.1 2247152 + 9.41332442449 TAGAAATACGCATACATTAcaagtataat P_0843 NC_025260.1 2287440 - 9.3947354868 TCTACAAATATCAATCGAGTACTTATAAT P_0844 NC_025260.1 2297902 - 9.72466489736 tttacagcaccatttaattttattatact P_0845 NC_025260.1 2297904 + 9.12153749663 tataataaaattaaatggtgctgtaaaat P_0846 NC_025260.1 2305661 - 11.1741240499 TTGAAAACCACGAAGAGTCAGGGTATAAT P_0850 NC_025260.1 2331361 - 10.9678226583 tagacaaatttatttacacataatataat P_0851 NC_025260.1 2331501 - 9.21395036002 TTTACAGCattaattttgtaatatatatt P_0852 NC_025260.1 2337411 - 11.0324807105 ttgaaataaaaacacaaaatatgtacaat P_0853 NC_025260.1 2354209 - 12.4368353558 TTTACTACACGTGTATTAACAGTTAAAAT P_0855 NC_025260.1 2368871 - 10.6573444709 tatacttttaaattaatagtttttataat P_0856 NC_025260.1 2368919 - 10.259396684 ttaacTTGACTGATGTGGTGTGTTATAAT P_0857 NC_025260.1 2392922 + 9.8717869397 TTTACAATTTACGCCTAATTCTATATGAT P_0858 NC_025260.1 2399609 + 9.80366369168 ttaacattctGGAAAggattatataaaat P_0859 NC_025260.1 2399859 - 9.23264161956 TTTACATCATTGCagtttttttttaaatt P_0861 NC_025260.1 2404445 - 10.182920219 tatacacacatttgaccatatattataat P_0862 NC_025260.1 2404447 + 9.1028462371 tataatatatggtcaaatgtgtgtataat P_0863 NC_025260.1 2413895 - 10.5786097964 TTGACTGTTGTACCAACTCAATATATAGT P_0866 NC_025260.1 2431295 - 9.89047819924 tttacatatatgaACCtttcaaataatat P_0867 NC_025260.1 2452201 - 9.21395036002 tttacacataaaacaaaaacatatatatt P_0868 NC_025260.1 2458370 + 9.73014360029 tttACATCGTAATAAACACTGTATACGAT P_0870 NC_025260.1 2471596 - 9.4383852124 tttacaaaaaattaagcaAATAACATAAT P_0876 NC_025260.1 2490004 - 10.4079128701 tttaaaataattgatcatgtttgtaaaat P_0878 NC_025260.1 2509020 - 10.3462111916 tttactgttttcatcacattttgtattat P_0879 NC_025260.1 2510440 - 10.882337122 tttaatttgctATTTAATTGTTGTAAAAT P_0883 NC_025260.1 2525478 - 10.6753806385 TTGACAGGACTGTTTCGGACATCTAATAT P_0886 NC_025260.1 2541381 - 9.8717869397 tttacaagATAAACATcttattgtattat P_0888 NC_025260.1 2546594 - 9.1028462371 tataatacaaatactaACTGATCTATAAT P_0889 NC_025260.1 2547954 - 9.9983452184 TTTACCGTACAgcttattatacatataat P_0890 NC_025260.1 2550910 - 9.89047819924 tttacactaCTTCAGAGCATACTTAATAT P_0891 NC_025260.1 2554631 - 9.27312139479 tttaagtaaatttgttccgaaaataaaat P_0894 NC_025260.1 2569442 + 9.43533040902 tgtacaataaatatCCCAGCGTTTAcaat P_0895 NC_025260.1 2571988 - 9.23264161956 tttacacatttgtataatattcgtaaatt P_0896 NC_025260.1 2574310 - 10.3462111916 tttactataaacaatagtatatatattat P_0899 NC_025260.1 2586203 - 11.6485483018 ttgaatataaaGTCCAATATGACtataat P_0900 NC_025260.1 2586447 - 9.21395036002 tttacacatcaaataaaatttaatatatt P_0901 NC_025260.1 2612183 + 10.3892216106 tttaaattaaaataaattaaaaatataat P_0903 NC_025260.1 2615772 + 9.57661539705 ttgaattaaattataagtatatttattat P_0904 NC_025260.1 2647534 + 9.389005265 tagactgaaaaacaaacaaatattaatat P_0906 NC_025260.1 2661387 - 10.2475782712 tttaaaaaataataacatatatgtacaat P_0907 NC_025260.1 2661685 + 9.28180220578 TGGAATCTTTTCTGAATTGAACTTATAAT P_0908 NC_025260.1 2661850 - 11.9437198444 tttacataacaAAAACGGCTTTATATAAT P_0909 NC_025260.1 2674612 - 9.6883746119 tttacttttacctATCTttcaattatatt P_0910 NC_025260.1 2674614 + 9.12153749663 tataattgaaAGATaggtaaaagtaaaat P_0911 NC_025260.1 2684521 - 11.1928153094 TTGAAATCAGATTTTTTTTCACttaaaat P_0912 NC_025260.1 2692370 - 11.7028537509 TTGACATCCATTTCGACAATATGTAGAAT P_0913 NC_025260.1 2696442 - 9.10219114517 ttgaaatatatttttatgtacaatattat P_0914 NC_025260.1 2700902 - 10.882337122 tttaataaaaatctttagttatttaaaat P_0915 NC_025260.1 2703196 + 11.6672395613 ttgaattttaaaatctgataaaataaaat P_0916 NC_025260.1 2708599 + 10.882337122 tttaatttaatgaaaGCAAAGCgtaaaat P_0918 NC_025260.1 2713553 - 9.8717869397 tttacatttaaacttcacttttttattat P_0919 NC_025260.1 2726816 + 9.59566500797 tgtacaatatttttaaaatatattaaaat P_0922 NC_025260.1 2734213 + 9.6883746119 tttactatTACCATGGAATCGCATATAtt P_0923 NC_025260.1 2735439 + 11.1741240499 ttGAAATACAGGAAGTTCATCCATATAAT P_0924 NC_025260.1 2740559 - 11.802076505 TTTACAAGACTTTTAATTGAATTTACAAT P_1041 NC_025260.1 715729 - 10.4079128701 tttaaatttcactaacacatattataaaat P_1240 NC_025260.1 2067430 + 11.802076505 tttacacacttgttCATGCACACTTACAAT P_1255 NC_025260.1 2192470 - 9.90643993591 TAGAATGCTATAATGgagataaaataaaat P_1256 NC_025260.1 2192566 - 9.24188322266 TAGACtcgattaaaatattaaacctaaact P_1257 NC_025260.1 2209838 + 10.4079128701 tttaaagcTGATATAATtctataataaaat P_1259 NC_025260.1 2229258 - 10.0412768796 tatacaaacgtgataacattttattacaat P_1262 NC_025260.1 2247471 - 9.45707647194 TTTACACAAATGGCAAGAAAGAAACAAAAT P_1264 NC_025260.1 2265678 + 9.1028462371 TATAATAGCCGTTCTATTAATTGTTATAAT P_1265 NC_025260.1 2265753 - 11.6125220679 TTGACGATAAATTAACCAtgagaataaaat P_1267 NC_025260.1 2284107 + 9.389005265 TAGactgtttattattaattttattaatat P_1268 NC_025260.1 2286126 - 10.4079128701 tttaaaattaatttaattaatacataaaat P_1269 NC_025260.1 2288033 - 9.6520640177 tttactattttattacattacATTTACAGT P_1277 NC_025260.1 2331348 - 11.802076505 tttacacataatataattttattatacaat P_1278 NC_025260.1 2331767 - 10.3892216106 tttaaaatatataaattttaaagatataat P_1279 NC_025260.1 2351552 - 9.78497243214 ttaacatatttagtttatttcatgtataat P_1282 NC_025260.1 2359354 - 10.7220025231 tttaatttttatatattttaccattacaat P_1283 NC_025260.1 2359690 - 9.85670187899 TTTACCATACATATGTTCCTGCCCTACAAT P_1284 NC_025260.1 2367303 - 9.80366369168 ttaacaaatagGTGATTTAACACGTAAAAT P_1285 NC_025260.1 2388378 + 10.622779769 ttgaataataaaaattgaagaagATAGAAT P_1286 NC_025260.1 2388614 - 10.0513980003 TGTACTCTTTGGTCCcctataaattataat P_1287 NC_025260.1 2388724 - 10.2177804088 tttactttttttttaaattttcttTAAACT P_1288 NC_025260.1 2390351 + 10.0412768796 tatacatttacacatgaACATGTATACAAT P_1289 NC_025260.1 2390513 - 9.8717869397 TTTACATGGTTTTTGTACGTTTTGTATGAT P_1290 NC_025260.1 2415069 - 10.3462111916 TTTActcattaaaattaacatttttattat P_1292 NC_025260.1 2439883 + 9.30049346532 tggaATCTTAGTGTGTTgagaatataaaat P_1293 NC_025260.1 2439960 - 9.6883746119 tttactcaatttattttattcatttatatt P_1294 NC_025260.1 2440082 - 11.962411104 TTTACAAGAGTTAAAGgttatatgtaaaat P_1295 NC_025260.1 2440084 + 11.962411104 tttacatataacCTTTAACTCTTGTAAAAT P_1298 NC_025260.1 2462055 + 9.12153749663 TATAATGTAAAGAATACGGATGAGTAAAAT P_1299 NC_025260.1 2468521 - 9.12153749663 tataatatattttagaaaatgtactaaaat P_1301 NC_025260.1 2476194 + 10.2016114786 tatacacacatatatgtaaacacataaaat P_1302 NC_025260.1 2478922 + 10.882337122 tttaataaacattacCGGAAATTCTAAAAT P_1303 NC_025260.1 2484843 - 10.7220025231 tttaatttatttttcctcGATTGTTacaat P_1306 NC_025260.1 2512458 + 9.36345307782 tttaaattctttacatttaataattagaat P_1307 NC_025260.1 2512878 - 11.6672395613 TTGAATTAATACTCTTAaactttataaaat P_1309 NC_025260.1 2528306 + 9.78497243214 TTAACAAACAATAGAAGATTTGAGTATAAT P_1311 NC_025260.1 2537586 + 10.8276196286 tttacgAGATCAACAAccaattaataaaat P_1313 NC_025260.1 2541224 - 10.4079128701 tttaaagtaTTGTACATCTGATTATAAAAT P_1314 NC_025260.1 2541551 + 11.6672395613 tTGAATAGTTTAAGTACACctttataaaat P_1315 NC_025260.1 2542199 + 10.2016114786 tatacacacactgtaactaaacaataaaat P_1316 NC_025260.1 2547016 - 9.89047819924 TTTACATATACGGcggaaaataaataatat P_1319 NC_025260.1 2557999 + 9.23362815123 ttaactttatcATTCTAATATTAGTAgaat P_1320 NC_025260.1 2568869 - 10.8636458625 tttaattttactcaatgttctatatataat P_1321 NC_025260.1 2569493 + 9.25443013525 tttaagtaGATTCCTCAattgatttataat P_1323 NC_025260.1 2586331 + 9.74610533696 tagaatattttattttcagtaatatacaat P_1324 NC_025260.1 2586368 - 9.80366369168 ttaacaaataaaagtcgagatgtgtaaaat P_1327 NC_025260.1 2596596 - 9.57661539705 TTgaatcaaatgtgtaagtggCTCTAtgat P_1329 NC_025260.1 2600961 - 10.0700892599 tgtactataaacttttcatttatttaaaat P_1330 NC_025260.1 2615704 - 10.4079128701 tttaaatggCCTTTGTTgttacaataaaat P_1332 NC_025260.1 2623280 + 9.33797436477 TTTACAGGTAAAATTTCTAGATATTAAAGT P_1334 NC_025260.1 2651770 - 10.0574458098 tttacttaacCAATTCAACTCCTATACACT P_1335 NC_025260.1 2654411 + 10.882337122 TTTAATTAGAATCCATAAACTTGGTAAAAT P_1336 NC_025260.1 2673484 - 9.58302155795 tttacatttattttccacttattttacact P_1337 NC_025260.1 2685635 - 10.0412768796 TATACAATTTATTCAGTGTTATGTTACAAT P_1338 NC_025260.1 2703180 + 10.4079128701 tttaaacacatatacattgaattttaaaat P_1339 NC_025260.1 2703190 + 10.2016114786 tatacattgaattttaaaatctgataaaat P_1340 NC_025260.1 2704659 + 10.3892216106 tttaaaGAGTAATTTGAAGAAAGGTATAAT P_1341 NC_025260.1 2708663 - 10.3462111916 tttactaaaaattatcataTTAACTATTAT P_1342 NC_025260.1 2719583 - 12.4181440963 TTTACTGATTTTAACTATCTTCCATATAAT P_1343 NC_025260.1 2719791 + 9.90643993591 TAGAATGAATGGTGATTTTAGAGCTAAAAT P_1344 NC_025260.1 2719947 - 10.3649024511 TTTACTGTTTTGTggaaatataattaatat P_1346 NC_025260.1 2732619 - 10.3892216106 TTTAAAATGGTAGGCAGACAGCTATATAAT P_1347 NC_025260.1 2733567 - 9.89047819924 tttacacaccaatgataaatataataatat