TPH_RS00005 SM00382 ATPases associated with a variety of cellular activities TPH_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain TPH_RS00010 SM00480 DNA polymerase III beta subunit TPH_RS00025 SM00387 Histidine kinase-like ATPases TPH_RS00025 SM00433 TopoisomeraseII TPH_RS00030 SM00831 Cation transporter/ATPase, N-terminus TPH_RS00065 SM00434 DNA Topoisomerase IV TPH_RS00135 SM00393 Putative single-stranded nucleic acids-binding domain TPH_RS00135 SM01245 TPH_RS00135 TPH_RS00150 SM00470 ParB-like nuclease domain TPH_RS00165 SM00470 ParB-like nuclease domain TPH_RS00180 SM01001 AIR carboxylase TPH_RS00235 SM00382 ATPases associated with a variety of cellular activities TPH_RS00240 SM00382 ATPases associated with a variety of cellular activities TPH_RS00245 SM00116 Domain in cystathionine beta-synthase and other proteins. TPH_RS00260 SM00091 PAS domain TPH_RS00260 SM00382 ATPases associated with a variety of cellular activities TPH_RS00395 SM00267 diguanylate cyclase TPH_RS00405 SM00382 ATPases associated with a variety of cellular activities TPH_RS00445 SM00422 helix_turn_helix, mercury resistance TPH_RS00445 SM00857 Resolvase, N terminal domain TPH_RS00455 SM00788 Adenylosuccinate synthetase TPH_RS00560 SM00382 ATPases associated with a variety of cellular activities TPH_RS00620 SM00382 ATPases associated with a variety of cellular activities TPH_RS00640 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS00660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS00680 SM00849 Metallo-beta-lactamase superfamily TPH_RS00685 SM00903 Flavin reductase like domain TPH_RS00695 SM00091 PAS domain TPH_RS00695 SM00382 ATPases associated with a variety of cellular activities TPH_RS00780 SM00852 Probable molybdopterin binding domain TPH_RS00785 SM00852 Probable molybdopterin binding domain TPH_RS00810 SM00382 ATPases associated with a variety of cellular activities TPH_RS00820 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS00840 SM00382 ATPases associated with a variety of cellular activities TPH_RS00860 SM00852 Probable molybdopterin binding domain TPH_RS00885 SM00382 ATPases associated with a variety of cellular activities TPH_RS00920 SM00852 Probable molybdopterin binding domain TPH_RS00930 SM00345 helix_turn_helix gluconate operon transcriptional repressor TPH_RS00930 SM00866 TPH_RS00930 TPH_RS00935 SM01018 B12 binding domain TPH_RS00965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TPH_RS00965 SM00387 Histidine kinase-like ATPases TPH_RS00965 SM00388 His Kinase A (phosphoacceptor) domain TPH_RS00970 SM00448 cheY-homologous receiver domain TPH_RS00970 SM00862 Transcriptional regulatory protein, C terminal TPH_RS00985 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS01030 SM00966 SpoVT / AbrB like domain TPH_RS01090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TPH_RS01090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TPH_RS01195 SM00287 Bacterial SH3 domain homologues TPH_RS01205 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS01240 SM00909 Sporulation and spore germination TPH_RS01245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TPH_RS01245 SM00387 Histidine kinase-like ATPases TPH_RS01245 SM00388 His Kinase A (phosphoacceptor) domain TPH_RS01250 SM00448 cheY-homologous receiver domain TPH_RS01250 SM00862 Transcriptional regulatory protein, C terminal TPH_RS01310 SM00487 DEAD-like helicases superfamily TPH_RS01310 SM00490 helicase superfamily c-terminal domain TPH_RS01335 SM01321 TPH_RS01335 TPH_RS01390 SM00984 UDP binding domain TPH_RS01435 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS01485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TPH_RS01500 SM00966 SpoVT / AbrB like domain TPH_RS01555 SM00966 SpoVT / AbrB like domain TPH_RS01565 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TPH_RS01565 SM00267 diguanylate cyclase TPH_RS01590 SM00966 SpoVT / AbrB like domain TPH_RS01635 SM00382 ATPases associated with a variety of cellular activities TPH_RS01655 SM00635 Bacterial Ig-like domain 2 TPH_RS01685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS01725 SM00382 ATPases associated with a variety of cellular activities TPH_RS01730 SM00327 von Willebrand factor (vWF) type A domain TPH_RS01730 SM00382 ATPases associated with a variety of cellular activities TPH_RS01745 SM00382 ATPases associated with a variety of cellular activities TPH_RS01755 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS01775 SM00382 ATPases associated with a variety of cellular activities TPH_RS01810 SM00382 ATPases associated with a variety of cellular activities TPH_RS01815 SM00382 ATPases associated with a variety of cellular activities TPH_RS01830 SM01018 B12 binding domain TPH_RS01840 SM01018 B12 binding domain TPH_RS01845 SM00342 helix_turn_helix, arabinose operon control protein TPH_RS01890 SM00382 ATPases associated with a variety of cellular activities TPH_RS01890 SM01086 C-terminal, D2-small domain, of ClpB protein TPH_RS01925 SM00382 ATPases associated with a variety of cellular activities TPH_RS01935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS01940 SM00382 ATPases associated with a variety of cellular activities TPH_RS01955 SM01058 CarD-like/TRCF domain TPH_RS01960 SM00670 Large family of predicted nucleotide-binding domains TPH_RS01970 SM00382 ATPases associated with a variety of cellular activities TPH_RS02010 SM00244 prohibitin homologues TPH_RS02040 SM00883 Chaperonin 10 Kd subunit TPH_RS02065 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS02085 SM00909 Sporulation and spore germination TPH_RS02090 SM00287 Bacterial SH3 domain homologues TPH_RS02090 SM00646 TPH_RS02090 TPH_RS02130 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain TPH_RS02145 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS02205 SM00966 SpoVT / AbrB like domain TPH_RS02210 SM01321 TPH_RS02210 TPH_RS02220 SM00382 ATPases associated with a variety of cellular activities TPH_RS02255 SM00257 Lysin motif TPH_RS02260 SM00116 Domain in cystathionine beta-synthase and other proteins. TPH_RS02270 SM00347 helix_turn_helix multiple antibiotic resistance protein TPH_RS02310 SM00899 TPH_RS02310 TPH_RS02335 SM01321 TPH_RS02335 TPH_RS02345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TPH_RS02365 SM00382 ATPases associated with a variety of cellular activities TPH_RS02365 SM00994 ClpX C4-type zinc finger TPH_RS02365 SM01086 C-terminal, D2-small domain, of ClpB protein TPH_RS02370 SM00382 ATPases associated with a variety of cellular activities TPH_RS02375 SM00382 ATPases associated with a variety of cellular activities TPH_RS02375 SM00464 Found in ATP-dependent protease La (LON) TPH_RS02410 SM00346 helix_turn_helix isocitrate lyase regulation TPH_RS02415 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TPH_RS02460 SM00448 cheY-homologous receiver domain TPH_RS02460 SM00862 Transcriptional regulatory protein, C terminal TPH_RS02465 SM00091 PAS domain TPH_RS02465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TPH_RS02465 SM00387 Histidine kinase-like ATPases TPH_RS02465 SM00388 His Kinase A (phosphoacceptor) domain TPH_RS02470 SM00382 ATPases associated with a variety of cellular activities TPH_RS02505 SM00840 TPH_RS02505 TPH_RS02515 SM00967 RNA 2'-O ribose methyltransferase substrate binding TPH_RS02555 SM00260 Two component signalling adaptor domain TPH_RS02565 SM00567 E-Z type HEAT repeats TPH_RS02575 SM00448 cheY-homologous receiver domain TPH_RS02580 SM00073 Histidine Phosphotransfer domain TPH_RS02580 SM00260 Two component signalling adaptor domain TPH_RS02580 SM00387 Histidine kinase-like ATPases TPH_RS02580 SM01231 TPH_RS02580 TPH_RS02590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TPH_RS02595 SM00448 cheY-homologous receiver domain TPH_RS02600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TPH_RS02600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TPH_RS02635 SM00382 ATPases associated with a variety of cellular activities TPH_RS02720 SM00834 Putative regulatory protein TPH_RS02735 SM00387 Histidine kinase-like ATPases TPH_RS02740 SM00421 helix_turn_helix, Lux Regulon TPH_RS02740 SM00448 cheY-homologous receiver domain TPH_RS02770 SM00858 TPH_RS02770 TPH_RS02775 SM00448 cheY-homologous receiver domain TPH_RS02800 SM00487 DEAD-like helicases superfamily TPH_RS02800 SM00490 helicase superfamily c-terminal domain TPH_RS02845 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS02850 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS02925 SM00116 Domain in cystathionine beta-synthase and other proteins. TPH_RS02950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS02955 SM00400 zinc finger TPH_RS02955 SM00493 TPH_RS02955 TPH_RS02965 SM01018 B12 binding domain TPH_RS02990 SM00481 DNA polymerase alpha chain like domain TPH_RS03000 SM00881 CoA binding domain TPH_RS03065 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS03075 SM00316 Ribosomal protein S1-like RNA-binding domain TPH_RS03240 SM00646 TPH_RS03240 TPH_RS03265 SM00357 Cold shock protein domain TPH_RS03275 SM00957 SecA DEAD-like domain TPH_RS03275 SM00958 SecA preprotein cross-linking domain TPH_RS03285 SM00937 TPH_RS03285 TPH_RS03300 SM00861 Transketolase, pyrimidine binding domain TPH_RS03305 SM00382 ATPases associated with a variety of cellular activities TPH_RS03330 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TPH_RS03330 SM00245 tail specific protease TPH_RS03335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TPH_RS03355 SM00487 DEAD-like helicases superfamily TPH_RS03355 SM00490 helicase superfamily c-terminal domain TPH_RS03360 SM00382 ATPases associated with a variety of cellular activities TPH_RS03365 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TPH_RS03365 SM00465 GIY-YIG type nucleases (URI domain) TPH_RS03410 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TPH_RS03435 SM01192 TPH_RS03435 TPH_RS03435 SM01193 TPH_RS03435 TPH_RS03455 SM01018 B12 binding domain TPH_RS03490 SM00382 ATPases associated with a variety of cellular activities TPH_RS03495 SM00911 HWE histidine kinase TPH_RS03500 SM00448 cheY-homologous receiver domain TPH_RS03500 SM01012 TPH_RS03500 TPH_RS03520 SM00877 TPH_RS03520 TPH_RS03530 SM00877 TPH_RS03530 TPH_RS03560 SM00877 TPH_RS03560 TPH_RS03570 SM00877 TPH_RS03570 TPH_RS03580 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain TPH_RS03590 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TPH_RS03610 SM00316 Ribosomal protein S1-like RNA-binding domain TPH_RS03610 SM00357 Cold shock protein domain TPH_RS03610 SM00955 TPH_RS03610 TPH_RS03655 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins TPH_RS03690 SM00858 TPH_RS03690 TPH_RS03830 SM00671 Sel1-like repeats. TPH_RS03885 SM00487 DEAD-like helicases superfamily TPH_RS03915 SM00091 PAS domain TPH_RS03915 SM00267 diguanylate cyclase TPH_RS03915 SM00448 cheY-homologous receiver domain TPH_RS03925 SM00530 Helix-turn-helix XRE-family like proteins TPH_RS03940 SM00857 Resolvase, N terminal domain TPH_RS03945 SM00857 Resolvase, N terminal domain TPH_RS03955 SM00857 Resolvase, N terminal domain TPH_RS04030 SM01207 TPH_RS04030 TPH_RS04040 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS04045 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS04065 SM00257 Lysin motif TPH_RS04090 SM00984 UDP binding domain TPH_RS04110 SM00387 Histidine kinase-like ATPases TPH_RS04110 SM00388 His Kinase A (phosphoacceptor) domain TPH_RS04115 SM00382 ATPases associated with a variety of cellular activities TPH_RS04115 SM00448 cheY-homologous receiver domain TPH_RS04125 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain TPH_RS04140 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS04170 SM00852 Probable molybdopterin binding domain TPH_RS04175 SM00852 Probable molybdopterin binding domain TPH_RS04180 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS04195 SM00852 Probable molybdopterin binding domain TPH_RS04210 SM00996 S-adenosyl-L-homocysteine hydrolase TPH_RS04210 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TPH_RS04225 SM01001 AIR carboxylase TPH_RS04230 SM00998 Adenylosuccinate lyase C-terminus TPH_RS04240 SM01211 TPH_RS04240 TPH_RS04265 SM00798 AICARFT/IMPCHase bienzyme TPH_RS04265 SM00851 MGS-like domain TPH_RS04270 SM01209 TPH_RS04270 TPH_RS04270 SM01210 TPH_RS04270 TPH_RS04285 SM01012 TPH_RS04285 TPH_RS04325 SM01230 TPH_RS04325 TPH_RS04345 SM00938 Nitrogen regulatory protein P-II TPH_RS04350 SM00938 Nitrogen regulatory protein P-II TPH_RS04395 SM00938 Nitrogen regulatory protein P-II TPH_RS04465 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TPH_RS04465 SM00292 breast cancer carboxy-terminal domain TPH_RS04465 SM00532 Ligase N family TPH_RS04475 SM00116 Domain in cystathionine beta-synthase and other proteins. TPH_RS04475 SM00267 diguanylate cyclase TPH_RS04480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TPH_RS04480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS04500 SM00845 GatB domain TPH_RS04520 SM01329 TPH_RS04520 TPH_RS04540 SM01066 Carbohydrate binding domain TPH_RS04570 SM01018 B12 binding domain TPH_RS04630 SM00933 TPH_RS04630 TPH_RS04680 SM00481 DNA polymerase alpha chain like domain TPH_RS04705 SM00382 ATPases associated with a variety of cellular activities TPH_RS04820 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS04845 SM01230 TPH_RS04845 TPH_RS04850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TPH_RS04850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TPH_RS04895 SM00382 ATPases associated with a variety of cellular activities TPH_RS04970 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TPH_RS04980 SM01120 TPH_RS04980 TPH_RS04980 SM01121 TPH_RS04980 TPH_RS04985 SM00487 DEAD-like helicases superfamily TPH_RS04985 SM00490 helicase superfamily c-terminal domain TPH_RS05005 SM00986 Uracil DNA glycosylase superfamily TPH_RS05005 SM00987 UreE urease accessory protein, C-terminal domain TPH_RS05065 SM00823 Phosphopantetheine attachment site TPH_RS05070 SM00358 Double-stranded RNA binding motif TPH_RS05070 SM00535 Ribonuclease III family TPH_RS05080 SM00968 SMC proteins Flexible Hinge Domain TPH_RS05085 SM00382 ATPases associated with a variety of cellular activities TPH_RS05085 SM00962 SRP54-type protein, GTPase domain TPH_RS05085 SM00963 SRP54-type protein, helical bundle domain TPH_RS05100 SM01007 Class II Aldolase and Adducin N-terminal domain TPH_RS05115 SM00382 ATPases associated with a variety of cellular activities TPH_RS05115 SM00962 SRP54-type protein, GTPase domain TPH_RS05115 SM00963 SRP54-type protein, helical bundle domain TPH_RS05170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS05195 SM01066 Carbohydrate binding domain TPH_RS05205 SM00382 ATPases associated with a variety of cellular activities TPH_RS05285 SM00382 ATPases associated with a variety of cellular activities TPH_RS05300 SM00382 ATPases associated with a variety of cellular activities TPH_RS05300 SM01072 Cell division protein 48 (CDC48) domain 2 TPH_RS05300 SM01073 Cell division protein 48 (CDC48) N-terminal domain TPH_RS05340 SM00345 helix_turn_helix gluconate operon transcriptional repressor TPH_RS05345 SM00382 ATPases associated with a variety of cellular activities TPH_RS05355 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen TPH_RS05365 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TPH_RS05365 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TPH_RS05365 SM00493 TPH_RS05365 TPH_RS05385 SM00382 ATPases associated with a variety of cellular activities TPH_RS05385 SM01086 C-terminal, D2-small domain, of ClpB protein TPH_RS05430 SM00382 ATPases associated with a variety of cellular activities TPH_RS05485 SM00448 cheY-homologous receiver domain TPH_RS05520 SM00382 ATPases associated with a variety of cellular activities TPH_RS05520 SM00962 SRP54-type protein, GTPase domain TPH_RS05535 SM00448 cheY-homologous receiver domain TPH_RS05540 SM00073 Histidine Phosphotransfer domain TPH_RS05540 SM00260 Two component signalling adaptor domain TPH_RS05540 SM00387 Histidine kinase-like ATPases TPH_RS05540 SM01231 TPH_RS05540 TPH_RS05630 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TPH_RS05650 SM00316 Ribosomal protein S1-like RNA-binding domain TPH_RS05650 SM00322 K homology RNA-binding domain TPH_RS05685 SM00904 Riboflavin kinase TPH_RS05690 SM01387 TPH_RS05690 TPH_RS05695 SM00316 Ribosomal protein S1-like RNA-binding domain TPH_RS05695 SM00322 K homology RNA-binding domain TPH_RS05705 SM00936 Penicillin-binding protein 5, C-terminal domain TPH_RS05735 SM00859 Semialdehyde dehydrogenase, NAD binding domain TPH_RS05740 SM01130 TPH_RS05740 TPH_RS05745 SM00849 Metallo-beta-lactamase superfamily TPH_RS05770 SM00382 ATPases associated with a variety of cellular activities TPH_RS05770 SM00843 TPH_RS05770 TPH_RS05780 SM00530 Helix-turn-helix XRE-family like proteins TPH_RS05785 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS05795 SM00382 ATPases associated with a variety of cellular activities TPH_RS05800 SM00852 Probable molybdopterin binding domain TPH_RS05810 SM00382 ATPases associated with a variety of cellular activities TPH_RS05815 SM00322 K homology RNA-binding domain TPH_RS05815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS05840 SM00481 DNA polymerase alpha chain like domain TPH_RS05845 SM00257 Lysin motif TPH_RS05850 SM00382 ATPases associated with a variety of cellular activities TPH_RS05875 SM00855 Phosphoglycerate mutase family TPH_RS05880 SM00116 Domain in cystathionine beta-synthase and other proteins. TPH_RS05880 SM01240 TPH_RS05880 TPH_RS05885 SM00382 ATPases associated with a variety of cellular activities TPH_RS05925 SM00345 helix_turn_helix gluconate operon transcriptional repressor TPH_RS05945 SM00530 Helix-turn-helix XRE-family like proteins TPH_RS06015 SM00644 TPH_RS06015 TPH_RS06015 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. TPH_RS06045 SM00487 DEAD-like helicases superfamily TPH_RS06045 SM00490 helicase superfamily c-terminal domain TPH_RS06115 SM00248 ankyrin repeats TPH_RS06165 SM00382 ATPases associated with a variety of cellular activities TPH_RS06180 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TPH_RS06185 SM00382 ATPases associated with a variety of cellular activities TPH_RS06200 SM00793 Accessory gene regulator B TPH_RS06230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS06260 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS06260 SM00954 Region found in RelA / SpoT proteins TPH_RS06270 SM00849 Metallo-beta-lactamase superfamily TPH_RS06375 SM00842 Cell division protein FtsA TPH_RS06380 SM00864 Tubulin/FtsZ family, GTPase domain TPH_RS06380 SM00865 Tubulin/FtsZ family, C-terminal domain TPH_RS06465 SM01152 TPH_RS06465 TPH_RS06510 SM00363 S4 RNA-binding domain TPH_RS06515 SM01230 TPH_RS06515 TPH_RS06520 SM01230 TPH_RS06520 TPH_RS06525 SM00448 cheY-homologous receiver domain TPH_RS06525 SM01012 TPH_RS06525 TPH_RS06600 SM01209 TPH_RS06600 TPH_RS06645 SM00919 Malic enzyme, NAD binding domain TPH_RS06645 SM01274 TPH_RS06645 TPH_RS06690 SM00967 RNA 2'-O ribose methyltransferase substrate binding TPH_RS06700 SM00873 B3/4 domain TPH_RS06700 SM00874 tRNA synthetase B5 domain TPH_RS06700 SM00896 Ferredoxin-fold anticodon binding domain TPH_RS06710 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TPH_RS06710 SM00481 DNA polymerase alpha chain like domain TPH_RS06710 SM00483 DNA polymerase X family TPH_RS06740 SM00463 Small MutS-related domain TPH_RS06740 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TPH_RS06740 SM00534 ATPase domain of DNA mismatch repair MUTS family TPH_RS06750 SM00506 Appr-1"-p processing enzyme TPH_RS06785 SM00749 bacterial OsmY and nodulation domain TPH_RS06875 SM00825 Beta-ketoacyl synthase TPH_RS06880 SM00822 TPH_RS06880 TPH_RS06885 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TPH_RS06905 SM00382 ATPases associated with a variety of cellular activities TPH_RS06915 SM00382 ATPases associated with a variety of cellular activities TPH_RS06920 SM00062 Bacterial periplasmic substrate-binding proteins TPH_RS06940 SM00853 MutL C terminal dimerisation domain TPH_RS06940 SM01340 TPH_RS06940 TPH_RS06955 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TPH_RS06955 SM00534 ATPase domain of DNA mismatch repair MUTS family TPH_RS06965 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS07040 SM00421 helix_turn_helix, Lux Regulon TPH_RS07115 SM00220 Serine/Threonine protein kinases, catalytic domain TPH_RS07115 SM00740 TPH_RS07115 TPH_RS07125 SM00240 Forkhead associated domain TPH_RS07130 SM00240 Forkhead associated domain TPH_RS07150 SM00487 DEAD-like helicases superfamily TPH_RS07150 SM00490 helicase superfamily c-terminal domain TPH_RS07165 SM01409 TPH_RS07165 TPH_RS07170 SM00072 Guanylate kinase homologues. TPH_RS07210 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TPH_RS07225 SM00851 MGS-like domain TPH_RS07225 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TPH_RS07225 SM01209 TPH_RS07225 TPH_RS07230 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TPH_RS07255 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS07265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TPH_RS07345 SM00448 cheY-homologous receiver domain TPH_RS07345 SM00850 LytTr DNA-binding domain TPH_RS07350 SM00793 Accessory gene regulator B TPH_RS07355 SM00387 Histidine kinase-like ATPases TPH_RS07425 SM00838 Elongation factor G C-terminus TPH_RS07425 SM00889 Elongation factor G, domain IV TPH_RS07435 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TPH_RS07440 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS07450 SM00382 ATPases associated with a variety of cellular activities TPH_RS07470 SM00028 Tetratricopeptide repeats TPH_RS07480 SM00267 diguanylate cyclase TPH_RS07480 SM00448 cheY-homologous receiver domain TPH_RS07515 SM00382 ATPases associated with a variety of cellular activities TPH_RS07615 SM00842 Cell division protein FtsA TPH_RS07620 SM00138 Methyltransferase, chemotaxis proteins TPH_RS07635 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS07640 SM01004 Delta-aminolevulinic acid dehydratase TPH_RS07645 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS07690 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS07780 SM01207 TPH_RS07780 TPH_RS07785 SM00382 ATPases associated with a variety of cellular activities TPH_RS07825 SM00834 Putative regulatory protein TPH_RS07830 SM00316 Ribosomal protein S1-like RNA-binding domain TPH_RS07835 SM00563 Phosphate acyltransferases TPH_RS07885 SM00382 ATPases associated with a variety of cellular activities TPH_RS07900 SM00363 S4 RNA-binding domain TPH_RS07905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TPH_RS07920 SM00936 Penicillin-binding protein 5, C-terminal domain TPH_RS08000 SM00387 Histidine kinase-like ATPases TPH_RS08010 SM00936 Penicillin-binding protein 5, C-terminal domain TPH_RS08015 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain TPH_RS08085 SM00448 cheY-homologous receiver domain TPH_RS08110 SM00363 S4 RNA-binding domain TPH_RS08115 SM00861 Transketolase, pyrimidine binding domain TPH_RS08170 SM00878 Biotin carboxylase C-terminal domain TPH_RS08225 SM00841 Elongation factor P, C-terminal TPH_RS08225 SM01185 TPH_RS08225 TPH_RS08305 SM00382 ATPases associated with a variety of cellular activities TPH_RS08310 SM00382 ATPases associated with a variety of cellular activities TPH_RS08340 SM00448 cheY-homologous receiver domain TPH_RS08375 SM00857 Resolvase, N terminal domain TPH_RS08410 SM01208 TPH_RS08410 TPH_RS08420 SM00732 Likely ribonuclease with RNase H fold. TPH_RS08435 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TPH_RS08450 SM00382 ATPases associated with a variety of cellular activities TPH_RS08460 SM00220 Serine/Threonine protein kinases, catalytic domain TPH_RS08500 SM00382 ATPases associated with a variety of cellular activities TPH_RS08505 SM00382 ATPases associated with a variety of cellular activities TPH_RS08620 SM00382 ATPases associated with a variety of cellular activities TPH_RS08640 SM00382 ATPases associated with a variety of cellular activities TPH_RS08645 SM00327 von Willebrand factor (vWF) type A domain TPH_RS08650 SM01228 TPH_RS08650 TPH_RS08665 SM00387 Histidine kinase-like ATPases TPH_RS08670 SM00793 Accessory gene regulator B TPH_RS08675 SM00448 cheY-homologous receiver domain TPH_RS08675 SM00850 LytTr DNA-binding domain TPH_RS08710 SM00421 helix_turn_helix, Lux Regulon TPH_RS08800 SM00834 Putative regulatory protein TPH_RS08805 SM00450 Rhodanese Homology Domain TPH_RS08810 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TPH_RS08820 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain TPH_RS08835 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain TPH_RS08885 SM00876 Biotin and Thiamin Synthesis associated domain TPH_RS08930 SM00382 ATPases associated with a variety of cellular activities TPH_RS08965 SM00834 Putative regulatory protein TPH_RS08995 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain TPH_RS08995 SM01232 TPH_RS08995 TPH_RS09000 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TPH_RS09000 SM00475 5'-3' exonuclease TPH_RS09000 SM00482 DNA polymerase A domain TPH_RS09005 SM00854 Bacterial capsule synthesis protein PGA_cap TPH_RS09030 SM00930 TPH_RS09030 TPH_RS09090 SM00363 S4 RNA-binding domain TPH_RS09120 SM00382 ATPases associated with a variety of cellular activities TPH_RS09130 SM00530 Helix-turn-helix XRE-family like proteins TPH_RS09150 SM00903 Flavin reductase like domain TPH_RS09165 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS09165 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TPH_RS09170 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS09185 SM00257 Lysin motif TPH_RS09190 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TPH_RS09225 SM01005 Alanine racemase, C-terminal domain TPH_RS09245 SM00260 Two component signalling adaptor domain TPH_RS09280 SM00849 Metallo-beta-lactamase superfamily TPH_RS09310 SM00478 endonuclease III TPH_RS09310 SM00525 TPH_RS09310 TPH_RS09330 SM00710 Parallel beta-helix repeats TPH_RS09360 SM01078 TPH_RS09360 TPH_RS09365 SM00899 TPH_RS09365 TPH_RS09395 SM00382 ATPases associated with a variety of cellular activities TPH_RS09470 SM00487 DEAD-like helicases superfamily TPH_RS09470 SM00490 helicase superfamily c-terminal domain TPH_RS09500 SM00382 ATPases associated with a variety of cellular activities TPH_RS09505 SM00382 ATPases associated with a variety of cellular activities TPH_RS09510 SM00347 helix_turn_helix multiple antibiotic resistance protein TPH_RS09520 SM00530 Helix-turn-helix XRE-family like proteins TPH_RS09525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TPH_RS09555 SM00226 Low molecular weight phosphatase family TPH_RS09670 SM00382 ATPases associated with a variety of cellular activities TPH_RS09695 SM00849 Metallo-beta-lactamase superfamily TPH_RS09700 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS09705 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS09760 SM00861 Transketolase, pyrimidine binding domain TPH_RS09770 SM00829 Enoylreductase TPH_RS09840 SM00917 LeuA allosteric (dimerisation) domain TPH_RS09845 SM01329 TPH_RS09845 TPH_RS09860 SM00917 LeuA allosteric (dimerisation) domain TPH_RS09905 SM00857 Resolvase, N terminal domain TPH_RS09950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS09985 SM01018 B12 binding domain TPH_RS09990 SM00342 helix_turn_helix, arabinose operon control protein TPH_RS10010 SM00382 ATPases associated with a variety of cellular activities TPH_RS10065 SM01018 B12 binding domain TPH_RS10100 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain TPH_RS10125 SM00382 ATPases associated with a variety of cellular activities TPH_RS10135 SM00091 PAS domain TPH_RS10145 SM01221 TPH_RS10145 TPH_RS10145 SM01222 TPH_RS10145 TPH_RS10165 SM00382 ATPases associated with a variety of cellular activities TPH_RS10225 SM00342 helix_turn_helix, arabinose operon control protein TPH_RS10225 SM00448 cheY-homologous receiver domain TPH_RS10330 SM00966 SpoVT / AbrB like domain TPH_RS10340 SM00487 DEAD-like helicases superfamily TPH_RS10340 SM00490 helicase superfamily c-terminal domain TPH_RS10345 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TPH_RS10345 SM00091 PAS domain TPH_RS10345 SM00267 diguanylate cyclase TPH_RS10345 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS10350 SM00897 FIST N domain TPH_RS10350 SM01204 TPH_RS10350 TPH_RS10420 SM00382 ATPases associated with a variety of cellular activities TPH_RS10435 SM00478 endonuclease III TPH_RS10445 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS10455 SM00271 DnaJ molecular chaperone homology domain TPH_RS10475 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS10480 SM00838 Elongation factor G C-terminus TPH_RS10545 SM00849 Metallo-beta-lactamase superfamily TPH_RS10550 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TPH_RS10590 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TPH_RS10630 SM00460 Transglutaminase/protease-like homologues TPH_RS10680 SM00421 helix_turn_helix, Lux Regulon TPH_RS10685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS10695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS10710 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TPH_RS10735 SM00091 PAS domain TPH_RS10735 SM00382 ATPases associated with a variety of cellular activities TPH_RS10770 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS10775 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS10780 SM00422 helix_turn_helix, mercury resistance TPH_RS10860 SM00530 Helix-turn-helix XRE-family like proteins TPH_RS10900 SM00857 Resolvase, N terminal domain TPH_RS10980 SM00062 Bacterial periplasmic substrate-binding proteins TPH_RS10980 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. TPH_RS10990 SM00382 ATPases associated with a variety of cellular activities TPH_RS11095 SM00518 AP endonuclease family 2 TPH_RS11130 SM00382 ATPases associated with a variety of cellular activities TPH_RS11160 SM00387 Histidine kinase-like ATPases TPH_RS11225 SM00849 Metallo-beta-lactamase superfamily TPH_RS11250 SM00382 ATPases associated with a variety of cellular activities TPH_RS11250 SM00930 TPH_RS11250 TPH_RS11270 SM01133 TPH_RS11270 TPH_RS11295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS11355 SM00849 Metallo-beta-lactamase superfamily TPH_RS11415 SM00857 Resolvase, N terminal domain TPH_RS11425 SM00857 Resolvase, N terminal domain TPH_RS11435 SM00257 Lysin motif TPH_RS11435 SM00644 TPH_RS11435 TPH_RS11445 SM00636 TPH_RS11445 TPH_RS11555 SM00470 ParB-like nuclease domain TPH_RS11560 SM00470 ParB-like nuclease domain TPH_RS11605 SM00382 ATPases associated with a variety of cellular activities TPH_RS11615 SM00857 Resolvase, N terminal domain TPH_RS11680 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS11725 SM00382 ATPases associated with a variety of cellular activities TPH_RS11740 SM00448 cheY-homologous receiver domain TPH_RS11740 SM00862 Transcriptional regulatory protein, C terminal TPH_RS11745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TPH_RS11745 SM00387 Histidine kinase-like ATPases TPH_RS11745 SM00388 His Kinase A (phosphoacceptor) domain TPH_RS11760 SM00382 ATPases associated with a variety of cellular activities TPH_RS11820 SM00382 ATPases associated with a variety of cellular activities TPH_RS11860 SM01240 TPH_RS11860 TPH_RS11920 SM00345 helix_turn_helix gluconate operon transcriptional repressor TPH_RS11920 SM00895 TPH_RS11920 TPH_RS11965 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain TPH_RS12100 SM00487 DEAD-like helicases superfamily TPH_RS12100 SM00490 helicase superfamily c-terminal domain TPH_RS12185 SM00421 helix_turn_helix, Lux Regulon TPH_RS12215 SM00636 TPH_RS12215 TPH_RS12240 SM00382 ATPases associated with a variety of cellular activities TPH_RS12305 SM00382 ATPases associated with a variety of cellular activities TPH_RS12310 SM00382 ATPases associated with a variety of cellular activities TPH_RS12335 SM00357 Cold shock protein domain TPH_RS12380 SM00903 Flavin reductase like domain TPH_RS12415 SM00966 SpoVT / AbrB like domain TPH_RS12430 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS12460 SM00382 ATPases associated with a variety of cellular activities TPH_RS12465 SM00382 ATPases associated with a variety of cellular activities TPH_RS12500 SM00382 ATPases associated with a variety of cellular activities TPH_RS12535 SM00382 ATPases associated with a variety of cellular activities TPH_RS12540 SM00382 ATPases associated with a variety of cellular activities TPH_RS12580 SM00491 TPH_RS12580 TPH_RS12600 SM00220 Serine/Threonine protein kinases, catalytic domain TPH_RS12600 SM00740 TPH_RS12600 TPH_RS12635 SM00859 Semialdehyde dehydrogenase, NAD binding domain TPH_RS12655 SM00646 TPH_RS12655 TPH_RS12680 SM00662 RNA polymerases D TPH_RS12685 SM00363 S4 RNA-binding domain TPH_RS12685 SM01390 TPH_RS12685 TPH_RS12705 SM00316 Ribosomal protein S1-like RNA-binding domain TPH_RS12765 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TPH_RS12770 SM01374 TPH_RS12770 TPH_RS12790 SM00322 K homology RNA-binding domain TPH_RS12805 SM01382 TPH_RS12805 TPH_RS12805 SM01383 TPH_RS12805 TPH_RS12825 SM01403 TPH_RS12825 TPH_RS12835 SM00838 Elongation factor G C-terminus TPH_RS12835 SM00889 Elongation factor G, domain IV TPH_RS12855 SM00663 RNA polymerase I subunit A N-terminus TPH_RS12875 SM00938 Nitrogen regulatory protein P-II TPH_RS12905 SM00670 Large family of predicted nucleotide-binding domains TPH_RS12925 SM00649 Ribosomal protein L11/L12 TPH_RS12930 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TPH_RS12930 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TPH_RS13020 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS13085 SM00855 Phosphoglycerate mutase family TPH_RS13110 SM00382 ATPases associated with a variety of cellular activities TPH_RS13115 SM00822 TPH_RS13115 TPH_RS13130 SM00642 Alpha-amylase domain TPH_RS13140 SM00642 Alpha-amylase domain TPH_RS13285 SM00905 Dihydroneopterin aldolase TPH_RS13295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TPH_RS13305 SM00562 TPH_RS13305 TPH_RS13310 SM00382 ATPases associated with a variety of cellular activities TPH_RS13315 SM00977 TilS substrate C-terminal domain TPH_RS13320 SM00331 Sigma factor PP2C-like phosphatases TPH_RS13340 SM00636 TPH_RS13340 TPH_RS13440 SM00382 ATPases associated with a variety of cellular activities TPH_RS13505 SM00345 helix_turn_helix gluconate operon transcriptional repressor TPH_RS13510 SM00529 Helix-turn-helix diphteria tox regulatory element TPH_RS13535 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS13535 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TPH_RS13545 SM00852 Probable molybdopterin binding domain TPH_RS13550 SM00852 Probable molybdopterin binding domain TPH_RS13560 SM00382 ATPases associated with a variety of cellular activities TPH_RS13575 SM00382 ATPases associated with a variety of cellular activities TPH_RS13645 SM00226 Low molecular weight phosphatase family TPH_RS13670 SM00937 TPH_RS13670 TPH_RS13695 SM00919 Malic enzyme, NAD binding domain TPH_RS13695 SM01274 TPH_RS13695 TPH_RS13705 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain TPH_RS13725 SM01018 B12 binding domain TPH_RS13740 SM01018 B12 binding domain TPH_RS13765 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TPH_RS13765 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TPH_RS13770 SM01018 B12 binding domain TPH_RS13775 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS13780 SM00091 PAS domain TPH_RS13780 SM00382 ATPases associated with a variety of cellular activities TPH_RS13790 SM00257 Lysin motif TPH_RS13795 SM00357 Cold shock protein domain TPH_RS13795 SM00382 ATPases associated with a variety of cellular activities TPH_RS13795 SM00959 Rho termination factor, N-terminal domain TPH_RS13815 SM01005 Alanine racemase, C-terminal domain TPH_RS13835 SM00836 DALR anticodon binding domain TPH_RS13835 SM01016 Arginyl tRNA synthetase N terminal dom TPH_RS13840 SM00387 Histidine kinase-like ATPases TPH_RS13840 SM00388 His Kinase A (phosphoacceptor) domain TPH_RS13850 SM00989 TPH_RS13850 TPH_RS13880 SM01018 B12 binding domain TPH_RS13885 SM00345 helix_turn_helix gluconate operon transcriptional repressor TPH_RS13885 SM00866 TPH_RS13885 TPH_RS13895 SM01018 B12 binding domain TPH_RS13930 SM00028 Tetratricopeptide repeats TPH_RS13935 SM00257 Lysin motif TPH_RS13935 SM01208 TPH_RS13935 TPH_RS13940 SM00729 Elongator protein 3, MiaB family, Radical SAM TPH_RS13985 SM00363 S4 RNA-binding domain TPH_RS13990 SM00411 bacterial (prokaryotic) histone like domain TPH_RS14005 SM00966 SpoVT / AbrB like domain TPH_RS14015 SM00487 DEAD-like helicases superfamily TPH_RS14015 SM00490 helicase superfamily c-terminal domain TPH_RS14015 SM00982 TPH_RS14015 TPH_RS14015 SM01058 CarD-like/TRCF domain TPH_RS14040 SM01400 TPH_RS14040 TPH_RS14060 SM00345 helix_turn_helix gluconate operon transcriptional repressor TPH_RS14060 SM00895 TPH_RS14060 TPH_RS14070 SM01209 TPH_RS14070 TPH_RS14090 SM00257 Lysin motif TPH_RS14215 SM00650 Ribosomal RNA adenine dimethylases TPH_RS14220 SM01208 TPH_RS14220 TPH_RS14225 SM01208 TPH_RS14225 TPH_RS14245 SM00966 SpoVT / AbrB like domain TPH_RS14360 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TPH_RS14360 SM00493 TPH_RS14360 TPH_RS14370 SM00382 ATPases associated with a variety of cellular activities TPH_RS14440 SM00382 ATPases associated with a variety of cellular activities TPH_RS14450 SM00100 Cyclic nucleotide-monophosphate binding domain TPH_RS14450 SM00419 helix_turn_helix, cAMP Regulatory protein