locus-tag class description TPH_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix TPH_RS00005 PF11638 DnaA N-terminal domain TPH_RS00005 PF00308 Bacterial dnaA protein TPH_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain TPH_RS00010 PF02767 DNA polymerase III beta subunit, central domain TPH_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain TPH_RS00015 PF02463 RecF/RecN/SMC N terminal domain TPH_RS00025 PF00204 DNA gyrase B TPH_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus TPH_RS00025 PF01751 Toprim domain TPH_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS00030 PF00690 Cation transporter/ATPase, N-terminus TPH_RS00030 PF00689 Cation transporting ATPase, C-terminus TPH_RS00035 PF00665 Integrase core domain TPH_RS00050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TPH_RS00050 PF03466 LysR substrate binding domain TPH_RS00055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TPH_RS00055 PF03466 LysR substrate binding domain TPH_RS00065 PF03989 DNA gyrase C-terminal domain, beta-propeller TPH_RS00065 PF00521 DNA gyrase/topoisomerase IV, subunit A TPH_RS00070 PF01680 SOR/SNZ family TPH_RS00075 PF01174 SNO glutamine amidotransferase family TPH_RS00080 PF00266 Aminotransferase class-V TPH_RS00085 PF01842 ACT domain TPH_RS00085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TPH_RS00085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TPH_RS00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPH_RS00090 PF02403 Seryl-tRNA synthetase N-terminal domain TPH_RS00125 PF00825 Ribonuclease P TPH_RS00130 PF02096 60Kd inner membrane protein TPH_RS00135 PF01424 R3H domain TPH_RS00135 PF14804 Jag N-terminus TPH_RS00140 PF10396 GTP-binding protein TrmE N-terminus TPH_RS00140 PF12631 MnmE helical domain TPH_RS00140 PF01926 50S ribosome-binding GTPase TPH_RS00145 PF02527 rRNA small subunit methyltransferase G TPH_RS00150 PF02195 ParB-like nuclease domain TPH_RS00150 PF17762 HTH domain found in ParB protein TPH_RS00160 PF13614 AAA domain TPH_RS00165 PF02195 ParB-like nuclease domain TPH_RS00165 PF17762 HTH domain found in ParB protein TPH_RS00175 PF01969 Protein of unknown function DUF111 TPH_RS00180 PF00731 AIR carboxylase TPH_RS00190 PF01551 Peptidase family M23 TPH_RS00190 PF04225 Opacity-associated protein A LysM-like domain TPH_RS00200 PF03698 Uncharacterised protein family (UPF0180) TPH_RS00205 PF06866 Protein of unknown function (DUF1256) TPH_RS00210 PF12390 Selenocysteine synthase N terminal TPH_RS00210 PF03841 L-seryl-tRNA selenium transferase TPH_RS00215 PF00009 Elongation factor Tu GTP binding domain TPH_RS00215 PF09107 Elongation factor SelB, winged helix TPH_RS00215 PF09106 Elongation factor SelB, winged helix TPH_RS00215 PF09105 Elongation factor SelB, winged helix TPH_RS00215 PF03144 Elongation factor Tu domain 2 TPH_RS00220 PF13458 Periplasmic binding protein TPH_RS00225 PF02653 Branched-chain amino acid transport system / permease component TPH_RS00230 PF02653 Branched-chain amino acid transport system / permease component TPH_RS00230 PF11862 Domain of unknown function (DUF3382) TPH_RS00235 PF00005 ABC transporter TPH_RS00235 PF12399 Branched-chain amino acid ATP-binding cassette transporter TPH_RS00240 PF00005 ABC transporter TPH_RS00245 PF00571 CBS domain TPH_RS00255 PF00890 FAD binding domain TPH_RS00255 PF14537 Cytochrome c3 TPH_RS00260 PF02954 Bacterial regulatory protein, Fis family TPH_RS00260 PF13426 PAS domain TPH_RS00260 PF00158 Sigma-54 interaction domain TPH_RS00270 PF17853 GGDEF-like domain TPH_RS00270 PF13556 PucR C-terminal helix-turn-helix domain TPH_RS00295 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family TPH_RS00300 PF03699 Uncharacterised protein family (UPF0182) TPH_RS00305 PF08141 Small acid-soluble spore protein H family TPH_RS00320 PF05139 Erythromycin esterase TPH_RS00320 PF00156 Phosphoribosyl transferase domain TPH_RS00345 PF00586 AIR synthase related protein, N-terminal domain TPH_RS00345 PF02769 AIR synthase related protein, C-terminal domain TPH_RS00350 PF01206 Sulfurtransferase TusA TPH_RS00360 PF01250 Ribosomal protein S6 TPH_RS00365 PF00436 Single-strand binding protein family TPH_RS00370 PF01084 Ribosomal protein S18 TPH_RS00385 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system TPH_RS00395 PF01368 DHH family TPH_RS00395 PF02272 DHHA1 domain TPH_RS00400 PF03948 Ribosomal protein L9, C-terminal domain TPH_RS00400 PF01281 Ribosomal protein L9, N-terminal domain TPH_RS00405 PF00004 ATPase family associated with various cellular activities (AAA) TPH_RS00405 PF05362 Lon protease (S16) C-terminal proteolytic domain TPH_RS00410 PF03796 DnaB-like helicase C terminal domain TPH_RS00410 PF00772 DnaB-like helicase N terminal domain TPH_RS00435 PF00440 Bacterial regulatory proteins, tetR family TPH_RS00435 PF18665 Tetracyclin repressor-like, C-terminal domain TPH_RS00455 PF00709 Adenylosuccinate synthetase TPH_RS00515 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system TPH_RS00540 PF01980 tRNA-methyltransferase O TPH_RS00545 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TPH_RS00555 PF01032 FecCD transport family TPH_RS00560 PF00005 ABC transporter TPH_RS00575 PF05651 Putative sugar diacid recognition TPH_RS00575 PF17853 GGDEF-like domain TPH_RS00575 PF13556 PucR C-terminal helix-turn-helix domain TPH_RS00580 PF01578 Cytochrome C assembly protein TPH_RS00585 PF05140 ResB-like family TPH_RS00590 PF17853 GGDEF-like domain TPH_RS00590 PF13556 PucR C-terminal helix-turn-helix domain TPH_RS00600 PF00890 FAD binding domain TPH_RS00600 PF14537 Cytochrome c3 TPH_RS00605 PF14537 Cytochrome c3 TPH_RS00605 PF00890 FAD binding domain TPH_RS00610 PF00890 FAD binding domain TPH_RS00610 PF14537 Cytochrome c3 TPH_RS00615 PF01032 FecCD transport family TPH_RS00620 PF00005 ABC transporter TPH_RS00625 PF01497 Periplasmic binding protein TPH_RS00635 PF06968 Biotin and Thiamin Synthesis associated domain TPH_RS00635 PF04055 Radical SAM superfamily TPH_RS00640 PF01568 Molydopterin dinucleotide binding domain TPH_RS00640 PF00384 Molybdopterin oxidoreductase TPH_RS00660 PF00384 Molybdopterin oxidoreductase TPH_RS00660 PF01568 Molydopterin dinucleotide binding domain TPH_RS00665 PF00037 4Fe-4S binding domain TPH_RS00665 PF13247 4Fe-4S dicluster domain TPH_RS00680 PF12706 Beta-lactamase superfamily domain TPH_RS00695 PF00158 Sigma-54 interaction domain TPH_RS00695 PF02954 Bacterial regulatory protein, Fis family TPH_RS00695 PF13426 PAS domain TPH_RS00740 PF00384 Molybdopterin oxidoreductase TPH_RS00740 PF01568 Molydopterin dinucleotide binding domain TPH_RS00745 PF13247 4Fe-4S dicluster domain TPH_RS00750 PF07690 Major Facilitator Superfamily TPH_RS00770 PF12804 MobA-like NTP transferase domain TPH_RS00775 PF03205 Molybdopterin guanine dinucleotide synthesis protein B TPH_RS00780 PF03453 MoeA N-terminal region (domain I and II) TPH_RS00780 PF03454 MoeA C-terminal region (domain IV) TPH_RS00780 PF00994 Probable molybdopterin binding domain TPH_RS00785 PF00994 Probable molybdopterin binding domain TPH_RS00785 PF03453 MoeA N-terminal region (domain I and II) TPH_RS00785 PF03454 MoeA C-terminal region (domain IV) TPH_RS00805 PF01032 FecCD transport family TPH_RS00810 PF00005 ABC transporter TPH_RS00815 PF01497 Periplasmic binding protein TPH_RS00820 PF04055 Radical SAM superfamily TPH_RS00820 PF06463 Molybdenum Cofactor Synthesis C TPH_RS00835 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS00840 PF08402 TOBE domain TPH_RS00840 PF00005 ABC transporter TPH_RS00850 PF01967 MoaC family TPH_RS00860 PF00994 Probable molybdopterin binding domain TPH_RS00870 PF02634 FdhD/NarQ family TPH_RS00885 PF13426 PAS domain TPH_RS00885 PF02954 Bacterial regulatory protein, Fis family TPH_RS00885 PF00158 Sigma-54 interaction domain TPH_RS00890 PF00384 Molybdopterin oxidoreductase TPH_RS00890 PF01568 Molydopterin dinucleotide binding domain TPH_RS00895 PF13247 4Fe-4S dicluster domain TPH_RS00895 PF12800 4Fe-4S binding domain TPH_RS00905 PF02634 FdhD/NarQ family TPH_RS00910 PF12804 MobA-like NTP transferase domain TPH_RS00915 PF03205 Molybdopterin guanine dinucleotide synthesis protein B TPH_RS00920 PF00994 Probable molybdopterin binding domain TPH_RS00920 PF03453 MoeA N-terminal region (domain I and II) TPH_RS00920 PF03454 MoeA C-terminal region (domain IV) TPH_RS00930 PF00392 Bacterial regulatory proteins, gntR family TPH_RS00930 PF07702 UTRA domain TPH_RS00935 PF02310 B12 binding domain TPH_RS00935 PF02607 B12 binding domain TPH_RS00940 PF00809 Pterin binding enzyme TPH_RS00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS00965 PF00512 His Kinase A (phospho-acceptor) domain TPH_RS00965 PF13426 PAS domain TPH_RS00965 PF00672 HAMP domain TPH_RS00970 PF00072 Response regulator receiver domain TPH_RS00970 PF00486 Transcriptional regulatory protein, C terminal TPH_RS00975 PF10776 Protein of unknown function (DUF2600) TPH_RS00980 PF00348 Polyprenyl synthetase TPH_RS00985 PF01336 OB-fold nucleic acid binding domain TPH_RS00985 PF01966 HD domain TPH_RS00990 PF07905 Purine catabolism regulatory protein-like family TPH_RS00990 PF13556 PucR C-terminal helix-turn-helix domain TPH_RS00990 PF17853 GGDEF-like domain TPH_RS01005 PF01850 PIN domain TPH_RS01015 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system TPH_RS01020 PF07927 HicA toxin of bacterial toxin-antitoxin, TPH_RS01040 PF03062 MBOAT, membrane-bound O-acyltransferase family TPH_RS01090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPH_RS01090 PF00672 HAMP domain TPH_RS01090 PF02743 Cache domain TPH_RS01150 PF05343 M42 glutamyl aminopeptidase TPH_RS01155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TPH_RS01160 PF00873 AcrB/AcrD/AcrF family TPH_RS01165 PF00440 Bacterial regulatory proteins, tetR family TPH_RS01180 PF00534 Glycosyl transferases group 1 TPH_RS01180 PF13579 Glycosyl transferase 4-like domain TPH_RS01190 PF00953 Glycosyl transferase family 4 TPH_RS01220 PF12841 YvrJ protein family TPH_RS01245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS01245 PF16736 Single Cache-like TPH_RS01245 PF00989 PAS fold TPH_RS01245 PF00512 His Kinase A (phospho-acceptor) domain TPH_RS01250 PF00486 Transcriptional regulatory protein, C terminal TPH_RS01250 PF00072 Response regulator receiver domain TPH_RS01270 PF01555 DNA methylase TPH_RS01310 PF00270 DEAD/DEAH box helicase TPH_RS01310 PF00271 Helicase conserved C-terminal domain TPH_RS01350 PF00395 S-layer homology domain TPH_RS01350 PF00963 Cohesin domain TPH_RS01365 PF02706 Chain length determinant protein TPH_RS01365 PF13807 G-rich domain on putative tyrosine kinase TPH_RS01370 PF13614 AAA domain TPH_RS01380 PF00953 Glycosyl transferase family 4 TPH_RS01385 PF02719 Polysaccharide biosynthesis protein TPH_RS01390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TPH_RS01390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TPH_RS01390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TPH_RS01395 PF01370 NAD dependent epimerase/dehydratase family TPH_RS01410 PF00534 Glycosyl transferases group 1 TPH_RS01420 PF13439 Glycosyltransferase Family 4 TPH_RS01420 PF00534 Glycosyl transferases group 1 TPH_RS01430 PF00534 Glycosyl transferases group 1 TPH_RS01430 PF13439 Glycosyltransferase Family 4 TPH_RS01435 PF01966 HD domain TPH_RS01485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPH_RS01485 PF00672 HAMP domain TPH_RS01485 PF12729 Four helix bundle sensory module for signal transduction TPH_RS01565 PF00990 Diguanylate cyclase, GGDEF domain TPH_RS01580 PF00700 Bacterial flagellin C-terminal helical region TPH_RS01580 PF00669 Bacterial flagellin N-terminal helical region TPH_RS01620 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TPH_RS01635 PF00005 ABC transporter TPH_RS01640 PF02361 Cobalt transport protein TPH_RS01665 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TPH_RS01675 PF01554 MatE TPH_RS01685 PF01966 HD domain TPH_RS01690 PF00872 Transposase, Mutator family TPH_RS01700 PF13087 AAA domain TPH_RS01700 PF13195 Protein of unknown function (DUF4011) TPH_RS01700 PF13086 AAA domain TPH_RS01700 PF13195 Protein of unknown function (DUF4011) TPH_RS01700 PF13087 AAA domain TPH_RS01700 PF13086 AAA domain TPH_RS01725 PF01078 Magnesium chelatase, subunit ChlI TPH_RS01725 PF17863 AAA lid domain TPH_RS01730 PF17863 AAA lid domain TPH_RS01730 PF07728 AAA domain (dynein-related subfamily) TPH_RS01730 PF13519 von Willebrand factor type A domain TPH_RS01740 PF01032 FecCD transport family TPH_RS01745 PF00005 ABC transporter TPH_RS01750 PF02514 CobN/Magnesium Chelatase TPH_RS01770 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TPH_RS01775 PF00005 ABC transporter TPH_RS01785 PF00872 Transposase, Mutator family TPH_RS01795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPH_RS01800 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS01805 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS01805 PF12911 N-terminal TM domain of oligopeptide transport permease C TPH_RS01810 PF00005 ABC transporter TPH_RS01810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPH_RS01815 PF00005 ABC transporter TPH_RS01815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPH_RS01820 PF01209 ubiE/COQ5 methyltransferase family TPH_RS01830 PF02310 B12 binding domain TPH_RS01830 PF02607 B12 binding domain TPH_RS01835 PF02310 B12 binding domain TPH_RS01835 PF02607 B12 binding domain TPH_RS01835 PF02965 Vitamin B12 dependent methionine synthase, activation domain TPH_RS01835 PF00809 Pterin binding enzyme TPH_RS01835 PF02574 Homocysteine S-methyltransferase TPH_RS01840 PF02607 B12 binding domain TPH_RS01840 PF02310 B12 binding domain TPH_RS01845 PF01965 DJ-1/PfpI family TPH_RS01845 PF12833 Helix-turn-helix domain TPH_RS01850 PF16363 GDP-mannose 4,6 dehydratase TPH_RS01860 PF03062 MBOAT, membrane-bound O-acyltransferase family TPH_RS01875 PF17727 CtsR C-terminal dimerization domain TPH_RS01875 PF05848 CtsR N-terminal HTH domain TPH_RS01885 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain TPH_RS01890 PF10431 C-terminal, D2-small domain, of ClpB protein TPH_RS01890 PF02861 Clp amino terminal domain, pathogenicity island component TPH_RS01890 PF17871 AAA lid domain TPH_RS01890 PF07724 AAA domain (Cdc48 subfamily) TPH_RS01890 PF00004 ATPase family associated with various cellular activities (AAA) TPH_RS01905 PF00881 Nitroreductase family TPH_RS01910 PF05681 Fumarate hydratase (Fumerase) TPH_RS01925 PF00158 Sigma-54 interaction domain TPH_RS01925 PF13426 PAS domain TPH_RS01925 PF02954 Bacterial regulatory protein, Fis family TPH_RS01930 PF04205 FMN-binding domain TPH_RS01930 PF00890 FAD binding domain TPH_RS01935 PF00072 Response regulator receiver domain TPH_RS01940 PF18073 Rubredoxin metal binding domain TPH_RS01945 PF02457 DisA bacterial checkpoint controller nucleotide-binding TPH_RS01945 PF10635 DisA bacterial checkpoint controller linker region TPH_RS01945 PF12826 Helix-hairpin-helix motif TPH_RS01955 PF02559 CarD-like/TRCF domain TPH_RS01965 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TPH_RS01965 PF02542 YgbB family TPH_RS01970 PF00989 PAS fold TPH_RS01970 PF02954 Bacterial regulatory protein, Fis family TPH_RS01970 PF00158 Sigma-54 interaction domain TPH_RS01990 PF01435 Peptidase family M48 TPH_RS02000 PF01343 Peptidase family S49 TPH_RS02010 PF01145 SPFH domain / Band 7 family TPH_RS02020 PF12849 PBP superfamily domain TPH_RS02035 PF00118 TCP-1/cpn60 chaperonin family TPH_RS02040 PF00166 Chaperonin 10 Kd subunit TPH_RS02050 PF01522 Polysaccharide deacetylase TPH_RS02060 PF01554 MatE TPH_RS02065 PF02310 B12 binding domain TPH_RS02065 PF13282 Domain of unknown function (DUF4070) TPH_RS02065 PF04055 Radical SAM superfamily TPH_RS02090 PF01520 N-acetylmuramoyl-L-alanine amidase TPH_RS02090 PF11741 AMIN domain TPH_RS02095 PF01184 GPR1/FUN34/yaaH family TPH_RS02100 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TPH_RS02105 PF01177 Asp/Glu/Hydantoin racemase TPH_RS02110 PF01138 3' exoribonuclease family, domain 1 TPH_RS02110 PF03725 3' exoribonuclease family, domain 2 TPH_RS02115 PF01725 Ham1 family TPH_RS02125 PF13247 4Fe-4S dicluster domain TPH_RS02130 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain TPH_RS02130 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 TPH_RS02145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPH_RS02145 PF00037 4Fe-4S binding domain TPH_RS02145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS02150 PF12838 4Fe-4S dicluster domain TPH_RS02150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS02150 PF00384 Molybdopterin oxidoreductase TPH_RS02150 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TPH_RS02150 PF01568 Molydopterin dinucleotide binding domain TPH_RS02155 PF00465 Iron-containing alcohol dehydrogenase TPH_RS02160 PF01695 IstB-like ATP binding protein TPH_RS02165 PF00465 Iron-containing alcohol dehydrogenase TPH_RS02220 PF00005 ABC transporter TPH_RS02255 PF01476 LysM domain TPH_RS02255 PF00877 NlpC/P60 family TPH_RS02255 PF08239 Bacterial SH3 domain TPH_RS02260 PF00654 Voltage gated chloride channel TPH_RS02265 PF13847 Methyltransferase domain TPH_RS02270 PF01047 MarR family TPH_RS02275 PF06253 Trimethylamine methyltransferase (MTTB) TPH_RS02280 PF00158 Sigma-54 interaction domain TPH_RS02280 PF09370 Phosphoenolpyruvate hydrolase-like TPH_RS02280 PF02954 Bacterial regulatory protein, Fis family TPH_RS02290 PF04029 2-phosphosulpholactate phosphatase TPH_RS02295 PF09370 Phosphoenolpyruvate hydrolase-like TPH_RS02300 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TPH_RS02300 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TPH_RS02315 PF07670 Nucleoside recognition TPH_RS02315 PF02421 Ferrous iron transport protein B TPH_RS02315 PF07664 Ferrous iron transport protein B C terminus TPH_RS02315 PF17910 FeoB cytosolic helical domain TPH_RS02320 PF07670 Nucleoside recognition TPH_RS02320 PF02421 Ferrous iron transport protein B TPH_RS02320 PF07664 Ferrous iron transport protein B C terminus TPH_RS02345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPH_RS02355 PF05697 Bacterial trigger factor protein (TF) TPH_RS02355 PF05698 Bacterial trigger factor protein (TF) C-terminus TPH_RS02355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TPH_RS02360 PF00574 Clp protease TPH_RS02365 PF06689 ClpX C4-type zinc finger TPH_RS02365 PF10431 C-terminal, D2-small domain, of ClpB protein TPH_RS02365 PF07724 AAA domain (Cdc48 subfamily) TPH_RS02370 PF00004 ATPase family associated with various cellular activities (AAA) TPH_RS02370 PF05362 Lon protease (S16) C-terminal proteolytic domain TPH_RS02375 PF05362 Lon protease (S16) C-terminal proteolytic domain TPH_RS02375 PF00004 ATPase family associated with various cellular activities (AAA) TPH_RS02375 PF02190 ATP-dependent protease La (LON) substrate-binding domain TPH_RS02385 PF00795 Carbon-nitrogen hydrolase TPH_RS02410 PF01614 Bacterial transcriptional regulator TPH_RS02410 PF09339 IclR helix-turn-helix domain TPH_RS02415 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TPH_RS02415 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TPH_RS02430 PF00871 Acetokinase family TPH_RS02435 PF01515 Phosphate acetyl/butaryl transferase TPH_RS02450 PF02086 D12 class N6 adenine-specific DNA methyltransferase TPH_RS02455 PF12849 PBP superfamily domain TPH_RS02460 PF00072 Response regulator receiver domain TPH_RS02460 PF00486 Transcriptional regulatory protein, C terminal TPH_RS02465 PF00512 His Kinase A (phospho-acceptor) domain TPH_RS02465 PF00989 PAS fold TPH_RS02465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS02465 PF16736 Single Cache-like TPH_RS02470 PF00005 ABC transporter TPH_RS02475 PF01895 PhoU domain TPH_RS02480 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS02485 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS02495 PF08264 Anticodon-binding domain of tRNA TPH_RS02495 PF00133 tRNA synthetases class I (I, L, M and V) TPH_RS02495 PF10458 Valyl tRNA synthetase tRNA binding arm TPH_RS02500 PF06426 Serine acetyltransferase, N-terminal TPH_RS02500 PF00132 Bacterial transferase hexapeptide (six repeats) TPH_RS02505 PF01406 tRNA synthetases class I (C) catalytic domain TPH_RS02505 PF09190 DALR domain TPH_RS02510 PF02511 Thymidylate synthase complementing protein TPH_RS02515 PF00588 SpoU rRNA Methylase family TPH_RS02515 PF08032 RNA 2'-O ribose methyltransferase substrate binding TPH_RS02520 PF05991 YacP-like NYN domain TPH_RS02525 PF08281 Sigma-70, region 4 TPH_RS02525 PF04542 Sigma-70 region 2 TPH_RS02555 PF01584 CheW-like domain TPH_RS02560 PF00072 Response regulator receiver domain TPH_RS02560 PF01339 CheB methylesterase TPH_RS02570 PF01739 CheR methyltransferase, SAM binding domain TPH_RS02570 PF03705 CheR methyltransferase, all-alpha domain TPH_RS02575 PF00486 Transcriptional regulatory protein, C terminal TPH_RS02575 PF00072 Response regulator receiver domain TPH_RS02580 PF07194 P2 response regulator binding domain TPH_RS02580 PF01627 Hpt domain TPH_RS02580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS02580 PF02895 Signal transducing histidine kinase, homodimeric domain TPH_RS02580 PF01584 CheW-like domain TPH_RS02590 PF02743 Cache domain TPH_RS02590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPH_RS02590 PF00672 HAMP domain TPH_RS02595 PF00072 Response regulator receiver domain TPH_RS02600 PF02743 Cache domain TPH_RS02600 PF00672 HAMP domain TPH_RS02600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPH_RS02605 PF03186 CobD/Cbib protein TPH_RS02610 PF00288 GHMP kinases N terminal domain TPH_RS02615 PF00155 Aminotransferase class I and II TPH_RS02620 PF01891 Cobalt uptake substrate-specific transmembrane region TPH_RS02625 PF02553 Cobalt transport protein component CbiN TPH_RS02635 PF00005 ABC transporter TPH_RS02640 PF01888 CbiD TPH_RS02645 PF05175 Methyltransferase small domain TPH_RS02650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPH_RS02655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPH_RS02660 PF11761 Cobalamin biosynthesis central region TPH_RS02660 PF01890 Cobalamin synthesis G C-terminus TPH_RS02660 PF11760 Cobalamin synthesis G N-terminal TPH_RS02665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TPH_RS02665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPH_RS02670 PF02571 Precorrin-6x reductase CbiJ/CobK TPH_RS02675 PF02570 Precorrin-8X methylmutase TPH_RS02680 PF07685 CobB/CobQ-like glutamine amidotransferase domain TPH_RS02680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TPH_RS02690 PF03023 Lipid II flippase MurJ TPH_RS02695 PF01950 Fructose-1,6-bisphosphatase TPH_RS02700 PF00483 Nucleotidyl transferase TPH_RS02705 PF13677 Membrane MotB of proton-channel complex MotA/MotB TPH_RS02705 PF00691 OmpA family TPH_RS02710 PF01618 MotA/TolQ/ExbB proton channel family TPH_RS02725 PF04239 Protein of unknown function (DUF421) TPH_RS02730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TPH_RS02730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TPH_RS02730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TPH_RS02730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TPH_RS02735 PF05384 Sensor protein DegS TPH_RS02735 PF07730 Histidine kinase TPH_RS02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS02740 PF00196 Bacterial regulatory proteins, luxR family TPH_RS02740 PF00072 Response regulator receiver domain TPH_RS02775 PF00072 Response regulator receiver domain TPH_RS02775 PF00196 Bacterial regulatory proteins, luxR family TPH_RS02780 PF00437 Type II/IV secretion system protein TPH_RS02800 PF00271 Helicase conserved C-terminal domain TPH_RS02800 PF04851 Type III restriction enzyme, res subunit TPH_RS02830 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin TPH_RS02835 PF02277 Phosphoribosyltransferase TPH_RS02840 PF00891 O-methyltransferase domain TPH_RS02840 PF16864 Dimerisation domain TPH_RS02850 PF01938 TRAM domain TPH_RS02850 PF00919 Uncharacterized protein family UPF0004 TPH_RS02850 PF04055 Radical SAM superfamily TPH_RS02870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPH_RS02870 PF00460 Flagella basal body rod protein TPH_RS02885 PF02623 FliW protein TPH_RS02890 PF02599 Global regulator protein family TPH_RS02895 PF13247 4Fe-4S dicluster domain TPH_RS02900 PF03063 Prismane/CO dehydrogenase family TPH_RS02905 PF02565 Recombination protein O C terminal TPH_RS02905 PF11967 Recombination protein O N terminal TPH_RS02915 PF02091 Glycyl-tRNA synthetase alpha subunit TPH_RS02920 PF02092 Glycyl-tRNA synthetase beta subunit TPH_RS02920 PF05746 DALR anticodon binding domain TPH_RS02925 PF08279 HTH domain TPH_RS02925 PF00571 CBS domain TPH_RS02930 PF03618 Kinase/pyrophosphorylase TPH_RS02935 PF02896 PEP-utilising enzyme, TIM barrel domain TPH_RS02935 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TPH_RS02935 PF00391 PEP-utilising enzyme, mobile domain TPH_RS02950 PF01966 HD domain TPH_RS02950 PF13286 Phosphohydrolase-associated domain TPH_RS02955 PF10410 DnaB-helicase binding domain of primase TPH_RS02955 PF08275 DNA primase catalytic core, N-terminal domain TPH_RS02955 PF01807 CHC2 zinc finger TPH_RS02960 PF04545 Sigma-70, region 4 TPH_RS02960 PF04539 Sigma-70 region 3 TPH_RS02960 PF04542 Sigma-70 region 2 TPH_RS02960 PF00140 Sigma-70 factor, region 1.2 TPH_RS02960 PF03979 Sigma-70 factor, region 1.1 TPH_RS02965 PF02607 B12 binding domain TPH_RS02965 PF02310 B12 binding domain TPH_RS02990 PF02811 PHP domain TPH_RS02995 PF08245 Mur ligase middle domain TPH_RS02995 PF02875 Mur ligase family, glutamate ligase domain TPH_RS03000 PF02629 CoA binding domain TPH_RS03000 PF06971 Putative DNA-binding protein N-terminus TPH_RS03010 PF02545 Maf-like protein TPH_RS03015 PF04002 RadC-like JAB domain TPH_RS03025 PF04085 rod shape-determining protein MreC TPH_RS03035 PF00905 Penicillin binding protein transpeptidase domain TPH_RS03035 PF03717 Penicillin-binding Protein dimerisation domain TPH_RS03040 PF03775 Septum formation inhibitor MinC, C-terminal domain TPH_RS03045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TPH_RS03050 PF03776 Septum formation topological specificity factor MinE TPH_RS03055 PF01098 Cell cycle protein TPH_RS03075 PF10150 Ribonuclease E/G family TPH_RS03075 PF00575 S1 RNA binding domain TPH_RS03080 PF13382 Adenine deaminase C-terminal domain TPH_RS03080 PF01979 Amidohydrolase family TPH_RS03095 PF01555 DNA methylase TPH_RS03110 PF01906 Putative heavy-metal-binding TPH_RS03130 PF04542 Sigma-70 region 2 TPH_RS03130 PF08281 Sigma-70, region 4 TPH_RS03205 PF13817 IS66 C-terminal element TPH_RS03205 PF13007 Transposase C of IS166 homeodomain TPH_RS03205 PF13005 zinc-finger binding domain of transposase IS66 TPH_RS03205 PF03050 Transposase IS66 family TPH_RS03220 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal TPH_RS03220 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TPH_RS03225 PF00374 Nickel-dependent hydrogenase TPH_RS03240 PF01520 N-acetylmuramoyl-L-alanine amidase TPH_RS03245 PF02001 Protein of unknown function DUF134 TPH_RS03260 PF02690 Na+/Pi-cotransporter TPH_RS03265 PF00313 'Cold-shock' DNA-binding domain TPH_RS03270 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TPH_RS03270 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus TPH_RS03275 PF01043 SecA preprotein cross-linking domain TPH_RS03275 PF07517 SecA DEAD-like domain TPH_RS03275 PF07516 SecA Wing and Scaffold domain TPH_RS03275 PF02810 SEC-C motif TPH_RS03285 PF03462 PCRF domain TPH_RS03285 PF00472 RF-1 domain TPH_RS03290 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TPH_RS03290 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TPH_RS03295 PF00456 Transketolase, thiamine diphosphate binding domain TPH_RS03300 PF02780 Transketolase, C-terminal domain TPH_RS03300 PF02779 Transketolase, pyrimidine binding domain TPH_RS03305 PF00005 ABC transporter TPH_RS03310 PF02687 FtsX-like permease family TPH_RS03310 PF18075 FtsX extracellular domain TPH_RS03315 PF01551 Peptidase family M23 TPH_RS03330 PF01471 Putative peptidoglycan binding domain TPH_RS03330 PF17820 PDZ domain TPH_RS03330 PF03572 Peptidase family S41 TPH_RS03335 PF13180 PDZ domain TPH_RS03345 PF05378 Hydantoinase/oxoprolinase N-terminal region TPH_RS03345 PF01968 Hydantoinase/oxoprolinase TPH_RS03355 PF00271 Helicase conserved C-terminal domain TPH_RS03355 PF12344 Ultra-violet resistance protein B TPH_RS03355 PF02151 UvrB/uvrC motif TPH_RS03355 PF17757 UvrB interaction domain TPH_RS03355 PF04851 Type III restriction enzyme, res subunit TPH_RS03360 PF17755 UvrA DNA-binding domain TPH_RS03360 PF17760 UvrA interaction domain TPH_RS03365 PF12826 Helix-hairpin-helix motif TPH_RS03365 PF02151 UvrB/uvrC motif TPH_RS03365 PF08459 UvrC Helix-hairpin-helix N-terminal TPH_RS03365 PF01541 GIY-YIG catalytic domain TPH_RS03375 PF00342 Phosphoglucose isomerase TPH_RS03380 PF00480 ROK family TPH_RS03385 PF03668 P-loop ATPase protein family TPH_RS03390 PF01933 Uncharacterised protein family UPF0052 TPH_RS03395 PF10298 WhiA N-terminal LAGLIDADG-like domain TPH_RS03395 PF14527 WhiA LAGLIDADG-like domain TPH_RS03395 PF02650 WhiA C-terminal HTH domain TPH_RS03405 PF00309 Sigma-54 factor, Activator interacting domain (AID) TPH_RS03405 PF04552 Sigma-54, DNA binding domain TPH_RS03405 PF04963 Sigma-54 factor, core binding domain TPH_RS03410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TPH_RS03410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TPH_RS03415 PF00162 Phosphoglycerate kinase TPH_RS03420 PF00121 Triosephosphate isomerase TPH_RS03425 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TPH_RS03425 PF01676 Metalloenzyme superfamily TPH_RS03435 PF00113 Enolase, C-terminal TIM barrel domain TPH_RS03435 PF03952 Enolase, N-terminal domain TPH_RS03440 PF03840 Preprotein translocase SecG subunit TPH_RS03445 PF06253 Trimethylamine methyltransferase (MTTB) TPH_RS03450 PF06253 Trimethylamine methyltransferase (MTTB) TPH_RS03455 PF02310 B12 binding domain TPH_RS03455 PF02607 B12 binding domain TPH_RS03490 PF10662 Ethanolamine utilisation - propanediol utilisation TPH_RS03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS03495 PF07568 Histidine kinase TPH_RS03495 PF12282 Signal transduction histidine kinase TPH_RS03500 PF03861 ANTAR domain TPH_RS03500 PF00072 Response regulator receiver domain TPH_RS03505 PF06277 Ethanolamine utilisation protein EutA TPH_RS03510 PF06751 Ethanolamine ammonia lyase large subunit (EutB) TPH_RS03515 PF05985 Ethanolamine ammonia-lyase light chain (EutC) TPH_RS03520 PF00936 BMC domain TPH_RS03525 PF00171 Aldehyde dehydrogenase family TPH_RS03525 PF00465 Iron-containing alcohol dehydrogenase TPH_RS03530 PF00936 BMC domain TPH_RS03535 PF01923 Cobalamin adenosyltransferase TPH_RS03550 PF03319 Ethanolamine utilisation protein EutN/carboxysome TPH_RS03555 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPH_RS03555 PF13237 4Fe-4S dicluster domain TPH_RS03555 PF13375 RnfC Barrel sandwich hybrid domain TPH_RS03555 PF10531 SLBB domain TPH_RS03560 PF00936 BMC domain TPH_RS03570 PF00936 BMC domain TPH_RS03575 PF04346 Ethanolamine utilisation protein, EutH TPH_RS03605 PF01259 SAICAR synthetase TPH_RS03610 PF17876 Cold shock domain TPH_RS03610 PF08206 Ribonuclease B OB domain TPH_RS03610 PF00773 RNB domain TPH_RS03610 PF00575 S1 RNA binding domain TPH_RS03615 PF01668 SmpB protein TPH_RS03635 PF02086 D12 class N6 adenine-specific DNA methyltransferase TPH_RS03655 PF00395 S-layer homology domain TPH_RS03665 PF04026 SpoVG TPH_RS03685 PF01478 Type IV leader peptidase family TPH_RS03685 PF06750 Bacterial Peptidase A24 N-terminal domain TPH_RS03700 PF00437 Type II/IV secretion system protein TPH_RS03735 PF00589 Phage integrase family TPH_RS03745 PF00589 Phage integrase family TPH_RS03745 PF02899 Phage integrase, N-terminal SAM-like domain TPH_RS03780 PF02661 Fic/DOC family TPH_RS03780 PF17841 BID domain of Bartonella effector protein (Bep) TPH_RS03800 PF08525 Opacity-associated protein A N-terminal motif TPH_RS03800 PF01551 Peptidase family M23 TPH_RS03800 PF01476 LysM domain TPH_RS03855 PF02915 Rubrerythrin TPH_RS03860 PF01880 Desulfoferrodoxin TPH_RS03880 PF01555 DNA methylase TPH_RS03890 PF00665 Integrase core domain TPH_RS03890 PF13333 Integrase core domain TPH_RS03890 PF13276 HTH-like domain TPH_RS03915 PF00990 Diguanylate cyclase, GGDEF domain TPH_RS03915 PF08448 PAS fold TPH_RS03945 PF07508 Recombinase TPH_RS03945 PF13408 Recombinase zinc beta ribbon domain TPH_RS03945 PF00239 Resolvase, N terminal domain TPH_RS03995 PF00665 Integrase core domain TPH_RS04005 PF01934 Protein of unknown function DUF86 TPH_RS04010 PF01613 Flavin reductase like domain TPH_RS04010 PF00301 Rubredoxin TPH_RS04015 PF06397 Desulfoferrodoxin, N-terminal domain TPH_RS04015 PF01880 Desulfoferrodoxin TPH_RS04025 PF03030 Inorganic H+ pyrophosphatase TPH_RS04030 PF02660 Glycerol-3-phosphate acyltransferase TPH_RS04040 PF00037 4Fe-4S binding domain TPH_RS04040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPH_RS04040 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS04045 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPH_RS04045 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TPH_RS04045 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS04055 PF04679 ATP dependent DNA ligase C terminal region TPH_RS04055 PF13298 DNA polymerase Ligase (LigD) TPH_RS04055 PF01068 ATP dependent DNA ligase domain TPH_RS04065 PF05257 CHAP domain TPH_RS04065 PF01476 LysM domain TPH_RS04080 PF03816 Cell envelope-related transcriptional attenuator domain TPH_RS04090 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TPH_RS04090 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TPH_RS04090 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TPH_RS04100 PF01464 Transglycosylase SLT domain TPH_RS04105 PF00899 ThiF family TPH_RS04110 PF00512 His Kinase A (phospho-acceptor) domain TPH_RS04110 PF00989 PAS fold TPH_RS04110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS04115 PF00158 Sigma-54 interaction domain TPH_RS04115 PF00072 Response regulator receiver domain TPH_RS04115 PF02954 Bacterial regulatory protein, Fis family TPH_RS04120 PF13247 4Fe-4S dicluster domain TPH_RS04125 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain TPH_RS04125 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 TPH_RS04140 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS04140 PF00037 4Fe-4S binding domain TPH_RS04140 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPH_RS04145 PF02906 Iron only hydrogenase large subunit, C-terminal domain TPH_RS04145 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TPH_RS04145 PF00037 4Fe-4S binding domain TPH_RS04145 PF02256 Iron hydrogenase small subunit TPH_RS04150 PF00465 Iron-containing alcohol dehydrogenase TPH_RS04155 PF01268 Formate--tetrahydrofolate ligase TPH_RS04160 PF02540 NAD synthase TPH_RS04170 PF03454 MoeA C-terminal region (domain IV) TPH_RS04170 PF03453 MoeA N-terminal region (domain I and II) TPH_RS04170 PF00994 Probable molybdopterin binding domain TPH_RS04175 PF12727 PBP superfamily domain TPH_RS04175 PF12728 Helix-turn-helix domain TPH_RS04180 PF06463 Molybdenum Cofactor Synthesis C TPH_RS04180 PF04055 Radical SAM superfamily TPH_RS04185 PF01967 MoaC family TPH_RS04195 PF00994 Probable molybdopterin binding domain TPH_RS04200 PF00118 TCP-1/cpn60 chaperonin family TPH_RS04210 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TPH_RS04210 PF05221 S-adenosyl-L-homocysteine hydrolase TPH_RS04215 PF00156 Phosphoribosyl transferase domain TPH_RS04220 PF00958 GMP synthase C terminal domain TPH_RS04220 PF00117 Glutamine amidotransferase class-I TPH_RS04225 PF00731 AIR carboxylase TPH_RS04230 PF00206 Lyase TPH_RS04230 PF10397 Adenylosuccinate lyase C-terminus TPH_RS04235 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase TPH_RS04245 PF02769 AIR synthase related protein, C-terminal domain TPH_RS04245 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TPH_RS04245 PF00586 AIR synthase related protein, N-terminal domain TPH_RS04250 PF13537 Glutamine amidotransferase domain TPH_RS04250 PF00156 Phosphoribosyl transferase domain TPH_RS04255 PF02769 AIR synthase related protein, C-terminal domain TPH_RS04255 PF00586 AIR synthase related protein, N-terminal domain TPH_RS04260 PF00551 Formyl transferase TPH_RS04265 PF01808 AICARFT/IMPCHase bienzyme TPH_RS04265 PF02142 MGS-like domain TPH_RS04270 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TPH_RS04270 PF02844 Phosphoribosylglycinamide synthetase, N domain TPH_RS04270 PF02843 Phosphoribosylglycinamide synthetase, C domain TPH_RS04285 PF08376 Nitrate and nitrite sensing TPH_RS04285 PF03861 ANTAR domain TPH_RS04290 PF00310 Glutamine amidotransferases class-II TPH_RS04295 PF13187 4Fe-4S dicluster domain TPH_RS04295 PF01645 Conserved region in glutamate synthase TPH_RS04300 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TPH_RS04300 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPH_RS04300 PF13247 4Fe-4S dicluster domain TPH_RS04305 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPH_RS04315 PF07685 CobB/CobQ-like glutamine amidotransferase domain TPH_RS04315 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TPH_RS04320 PF02540 NAD synthase TPH_RS04320 PF00795 Carbon-nitrogen hydrolase TPH_RS04325 PF03951 Glutamine synthetase, beta-Grasp domain TPH_RS04325 PF00120 Glutamine synthetase, catalytic domain TPH_RS04330 PF13537 Glutamine amidotransferase domain TPH_RS04330 PF00733 Asparagine synthase TPH_RS04340 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family TPH_RS04345 PF00543 Nitrogen regulatory protein P-II TPH_RS04350 PF00543 Nitrogen regulatory protein P-II TPH_RS04355 PF00148 Nitrogenase component 1 type Oxidoreductase TPH_RS04360 PF00148 Nitrogenase component 1 type Oxidoreductase TPH_RS04365 PF00148 Nitrogenase component 1 type Oxidoreductase TPH_RS04370 PF02579 Dinitrogenase iron-molybdenum cofactor TPH_RS04370 PF04055 Radical SAM superfamily TPH_RS04375 PF00682 HMGL-like TPH_RS04380 PF00005 ABC transporter TPH_RS04390 PF00909 Ammonium Transporter Family TPH_RS04395 PF00543 Nitrogen regulatory protein P-II TPH_RS04400 PF03323 Bacillus/Clostridium GerA spore germination protein TPH_RS04405 PF03845 Spore germination protein TPH_RS04410 PF05504 Spore germination B3/ GerAC like, C-terminal TPH_RS04420 PF13393 Histidyl-tRNA synthetase TPH_RS04425 PF01634 ATP phosphoribosyltransferase TPH_RS04430 PF00815 Histidinol dehydrogenase TPH_RS04435 PF00475 Imidazoleglycerol-phosphate dehydratase TPH_RS04440 PF00117 Glutamine amidotransferase class-I TPH_RS04445 PF00977 Histidine biosynthesis protein TPH_RS04450 PF00977 Histidine biosynthesis protein TPH_RS04455 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TPH_RS04455 PF01502 Phosphoribosyl-AMP cyclohydrolase TPH_RS04460 PF13361 UvrD-like helicase C-terminal domain TPH_RS04460 PF00580 UvrD/REP helicase N-terminal domain TPH_RS04465 PF12826 Helix-hairpin-helix motif TPH_RS04465 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TPH_RS04465 PF03120 NAD-dependent DNA ligase OB-fold domain TPH_RS04465 PF00533 BRCA1 C Terminus (BRCT) domain TPH_RS04465 PF01653 NAD-dependent DNA ligase adenylation domain TPH_RS04475 PF00571 CBS domain TPH_RS04475 PF00478 IMP dehydrogenase / GMP reductase domain TPH_RS04480 PF00072 Response regulator receiver domain TPH_RS04490 PF02686 Glu-tRNAGln amidotransferase C subunit TPH_RS04495 PF01425 Amidase TPH_RS04500 PF02637 GatB domain TPH_RS04500 PF02934 GatB/GatE catalytic domain TPH_RS04505 PF00682 HMGL-like TPH_RS04510 PF00330 Aconitase family (aconitate hydratase) TPH_RS04515 PF00694 Aconitase C-terminal domain TPH_RS04520 PF18324 Hypothetical protein TT1725 TPH_RS04520 PF00180 Isocitrate/isopropylmalate dehydrogenase TPH_RS04525 PF05504 Spore germination B3/ GerAC like, C-terminal TPH_RS04530 PF03845 Spore germination protein TPH_RS04535 PF03323 Bacillus/Clostridium GerA spore germination protein TPH_RS04550 PF13439 Glycosyltransferase Family 4 TPH_RS04550 PF00534 Glycosyl transferases group 1 TPH_RS04555 PF00483 Nucleotidyl transferase TPH_RS04560 PF01208 Uroporphyrinogen decarboxylase (URO-D) TPH_RS04570 PF02607 B12 binding domain TPH_RS04570 PF02310 B12 binding domain TPH_RS04575 PF03063 Prismane/CO dehydrogenase family TPH_RS04580 PF02082 Transcriptional regulator TPH_RS04585 PF03065 Glycosyl hydrolase family 57 TPH_RS04585 PF09210 Domain of unknown function (DUF1957) TPH_RS04600 PF17788 HypF Kae1-like domain TPH_RS04600 PF00708 Acylphosphatase TPH_RS04600 PF07503 HypF finger TPH_RS04600 PF01300 Telomere recombination TPH_RS04605 PF01455 HupF/HypC family TPH_RS04610 PF01924 Hydrogenase formation hypA family TPH_RS04615 PF02769 AIR synthase related protein, C-terminal domain TPH_RS04615 PF00586 AIR synthase related protein, N-terminal domain TPH_RS04625 PF01979 Amidohydrolase family TPH_RS04645 PF02463 RecF/RecN/SMC N terminal domain TPH_RS04660 PF02673 Bacitracin resistance protein BacA TPH_RS04665 PF06782 Uncharacterised protein family (UPF0236) TPH_RS04680 PF02811 PHP domain TPH_RS04680 PF01336 OB-fold nucleic acid binding domain TPH_RS04680 PF07733 Bacterial DNA polymerase III alpha NTPase domain TPH_RS04680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TPH_RS04680 PF14579 Helix-hairpin-helix motif TPH_RS04685 PF02081 Tryptophan RNA-binding attenuator protein TPH_RS04695 PF00365 Phosphofructokinase TPH_RS04700 PF00224 Pyruvate kinase, barrel domain TPH_RS04700 PF02887 Pyruvate kinase, alpha/beta domain TPH_RS04700 PF00391 PEP-utilising enzyme, mobile domain TPH_RS04705 PF00005 ABC transporter TPH_RS04710 PF01458 Uncharacterized protein family (UPF0051) TPH_RS04740 PF01891 Cobalt uptake substrate-specific transmembrane region TPH_RS04740 PF13190 PDGLE domain TPH_RS04750 PF00266 Aminotransferase class-V TPH_RS04755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TPH_RS04755 PF03466 LysR substrate binding domain TPH_RS04760 PF00793 DAHP synthetase I family TPH_RS04760 PF18152 DAHP synthase ferredoxin-like domain TPH_RS04765 PF01842 ACT domain TPH_RS04765 PF02153 Prephenate dehydrogenase TPH_RS04785 PF12627 Probable RNA and SrmB- binding site of polymerase A TPH_RS04785 PF01743 Poly A polymerase head domain TPH_RS04785 PF13735 tRNA nucleotidyltransferase domain 2 putative TPH_RS04790 PF12146 Serine aminopeptidase, S33 TPH_RS04805 PF02901 Pyruvate formate lyase-like TPH_RS04805 PF01228 Glycine radical TPH_RS04810 PF04055 Radical SAM superfamily TPH_RS04840 PF01869 BadF/BadG/BcrA/BcrD ATPase family TPH_RS04845 PF03951 Glutamine synthetase, beta-Grasp domain TPH_RS04845 PF00120 Glutamine synthetase, catalytic domain TPH_RS04850 PF00672 HAMP domain TPH_RS04850 PF17202 Single cache domain 3 TPH_RS04850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPH_RS04885 PF06133 Control of competence regulator ComK, YlbF/YmcA TPH_RS04890 PF02361 Cobalt transport protein TPH_RS04895 PF00005 ABC transporter TPH_RS04905 PF17284 Spermidine synthase tetramerisation domain TPH_RS04910 PF00491 Arginase family TPH_RS04970 PF03129 Anticodon binding domain TPH_RS04970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPH_RS04970 PF02824 TGS domain TPH_RS04970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TPH_RS04975 PF03780 Asp23 family, cell envelope-related function TPH_RS04980 PF13684 Dihydroxyacetone kinase family TPH_RS04980 PF02734 DAK2 domain TPH_RS04985 PF00270 DEAD/DEAH box helicase TPH_RS04985 PF17191 RecG wedge domain TPH_RS04985 PF00271 Helicase conserved C-terminal domain TPH_RS04990 PF00269 Small, acid-soluble spore proteins, alpha/beta type TPH_RS04995 PF00269 Small, acid-soluble spore proteins, alpha/beta type TPH_RS05000 PF03418 Germination protease TPH_RS05005 PF03167 Uracil DNA glycosylase superfamily TPH_RS05010 PF06782 Uncharacterised protein family (UPF0236) TPH_RS05020 PF01467 Cytidylyltransferase-like TPH_RS05030 PF07670 Nucleoside recognition TPH_RS05035 PF01515 Phosphate acetyl/butaryl transferase TPH_RS05040 PF00871 Acetokinase family TPH_RS05050 PF01783 Ribosomal L32p protein family TPH_RS05060 PF02504 Fatty acid synthesis protein TPH_RS05065 PF00550 Phosphopantetheine attachment site TPH_RS05070 PF14622 Ribonuclease-III-like TPH_RS05070 PF00035 Double-stranded RNA binding motif TPH_RS05075 PF04232 Stage V sporulation protein S (SpoVS) TPH_RS05080 PF02463 RecF/RecN/SMC N terminal domain TPH_RS05080 PF06470 SMC proteins Flexible Hinge Domain TPH_RS05085 PF00448 SRP54-type protein, GTPase domain TPH_RS05085 PF02881 SRP54-type protein, helical bundle domain TPH_RS05090 PF01048 Phosphorylase superfamily TPH_RS05095 PF01008 Initiation factor 2 subunit family TPH_RS05100 PF00596 Class II Aldolase and Adducin N-terminal domain TPH_RS05105 PF01979 Amidohydrolase family TPH_RS05110 PF04297 Putative helix-turn-helix protein, YlxM / p13 like TPH_RS05115 PF00448 SRP54-type protein, GTPase domain TPH_RS05115 PF02978 Signal peptide binding domain TPH_RS05115 PF02881 SRP54-type protein, helical bundle domain TPH_RS05120 PF00886 Ribosomal protein S16 TPH_RS05130 PF05239 PRC-barrel domain TPH_RS05130 PF01782 RimM N-terminal domain TPH_RS05135 PF01746 tRNA (Guanine-1)-methyltransferase TPH_RS05140 PF01245 Ribosomal protein L19 TPH_RS05145 PF10502 Signal peptidase, peptidase S26 TPH_RS05150 PF01926 50S ribosome-binding GTPase TPH_RS05155 PF01351 Ribonuclease HII TPH_RS05165 PF01312 FlhB HrpN YscU SpaS Family TPH_RS05170 PF01966 HD domain TPH_RS05175 PF02021 Uncharacterised protein family UPF0102 TPH_RS05180 PF01565 FAD binding domain TPH_RS05180 PF02913 FAD linked oxidases, C-terminal domain TPH_RS05185 PF02754 Cysteine-rich domain TPH_RS05205 PF01078 Magnesium chelatase, subunit ChlI TPH_RS05205 PF13335 Magnesium chelatase, subunit ChlI C-terminal TPH_RS05230 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TPH_RS05265 PF00741 Gas vesicle protein TPH_RS05270 PF00741 Gas vesicle protein TPH_RS05270 PF05121 Gas vesicle protein K TPH_RS05275 PF00741 Gas vesicle protein TPH_RS05285 PF07728 AAA domain (dynein-related subfamily) TPH_RS05300 PF17862 AAA+ lid domain TPH_RS05300 PF06480 FtsH Extracellular TPH_RS05300 PF01434 Peptidase family M41 TPH_RS05300 PF00004 ATPase family associated with various cellular activities (AAA) TPH_RS05310 PF00741 Gas vesicle protein TPH_RS05325 PF00741 Gas vesicle protein TPH_RS05340 PF00392 Bacterial regulatory proteins, gntR family TPH_RS05345 PF00005 ABC transporter TPH_RS05355 PF02735 Ku70/Ku80 beta-barrel domain TPH_RS05360 PF17782 DprA winged helix domain TPH_RS05360 PF02481 DNA recombination-mediator protein A TPH_RS05365 PF01131 DNA topoisomerase TPH_RS05365 PF01396 Topoisomerase DNA binding C4 zinc finger TPH_RS05365 PF01751 Toprim domain TPH_RS05370 PF01134 Glucose inhibited division protein A TPH_RS05375 PF02899 Phage integrase, N-terminal SAM-like domain TPH_RS05375 PF00589 Phage integrase family TPH_RS05380 PF00227 Proteasome subunit TPH_RS05385 PF10431 C-terminal, D2-small domain, of ClpB protein TPH_RS05385 PF07724 AAA domain (Cdc48 subfamily) TPH_RS05385 PF00004 ATPase family associated with various cellular activities (AAA) TPH_RS05390 PF08222 CodY helix-turn-helix domain TPH_RS05390 PF06018 CodY GAF-like domain TPH_RS05400 PF00460 Flagella basal body rod protein TPH_RS05405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPH_RS05405 PF00460 Flagella basal body rod protein TPH_RS05410 PF02049 Flagellar hook-basal body complex protein FliE TPH_RS05415 PF01514 Secretory protein of YscJ/FliF family TPH_RS05415 PF08345 Flagellar M-ring protein C-terminal TPH_RS05420 PF14841 FliG middle domain TPH_RS05420 PF14842 FliG N-terminal domain TPH_RS05420 PF01706 FliG C-terminal domain TPH_RS05430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPH_RS05430 PF18269 T3SS EscN ATPase C-terminal domain TPH_RS05430 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPH_RS05450 PF03963 Flagellar hook capping protein - N-terminal region TPH_RS05460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPH_RS05460 PF00460 Flagella basal body rod protein TPH_RS05460 PF07559 Flagellar basal body protein FlaE TPH_RS05475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TPH_RS05475 PF02154 Flagellar motor switch protein FliM TPH_RS05480 PF04509 CheC-like family TPH_RS05480 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TPH_RS05485 PF00072 Response regulator receiver domain TPH_RS05495 PF00813 FliP family TPH_RS05500 PF01313 Bacterial export proteins, family 3 TPH_RS05505 PF01311 Bacterial export proteins, family 1 TPH_RS05510 PF01312 FlhB HrpN YscU SpaS Family TPH_RS05515 PF00771 FHIPEP family TPH_RS05520 PF00448 SRP54-type protein, GTPase domain TPH_RS05525 PF10609 NUBPL iron-transfer P-loop NTPase TPH_RS05535 PF01339 CheB methylesterase TPH_RS05535 PF00072 Response regulator receiver domain TPH_RS05540 PF01627 Hpt domain TPH_RS05540 PF07194 P2 response regulator binding domain TPH_RS05540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS05540 PF01584 CheW-like domain TPH_RS05540 PF02895 Signal transducing histidine kinase, homodimeric domain TPH_RS05545 PF04509 CheC-like family TPH_RS05550 PF03975 CheD chemotactic sensory transduction TPH_RS05560 PF04545 Sigma-70, region 4 TPH_RS05560 PF04539 Sigma-70 region 3 TPH_RS05560 PF04542 Sigma-70 region 2 TPH_RS05580 PF00318 Ribosomal protein S2 TPH_RS05585 PF00889 Elongation factor TS TPH_RS05590 PF00696 Amino acid kinase family TPH_RS05595 PF01765 Ribosome recycling factor TPH_RS05610 PF01255 Putative undecaprenyl diphosphate synthase TPH_RS05620 PF01594 AI-2E family transporter TPH_RS05625 PF13288 DXP reductoisomerase C-terminal domain TPH_RS05625 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TPH_RS05625 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TPH_RS05630 PF02163 Peptidase family M50 TPH_RS05630 PF17820 PDZ domain TPH_RS05635 PF04551 GcpE protein TPH_RS05640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPH_RS05640 PF03129 Anticodon binding domain TPH_RS05640 PF04073 Aminoacyl-tRNA editing domain TPH_RS05645 PF17384 RimP C-terminal SH3 domain TPH_RS05645 PF02576 RimP N-terminal domain TPH_RS05650 PF00575 S1 RNA binding domain TPH_RS05650 PF13184 NusA-like KH domain TPH_RS05650 PF08529 NusA N-terminal domain TPH_RS05655 PF04296 Protein of unknown function (DUF448) TPH_RS05665 PF04760 Translation initiation factor IF-2, N-terminal region TPH_RS05665 PF11987 Translation-initiation factor 2 TPH_RS05665 PF11987 Translation-initiation factor 2 TPH_RS05665 PF00009 Elongation factor Tu GTP binding domain TPH_RS05665 PF04760 Translation initiation factor IF-2, N-terminal region TPH_RS05665 PF00009 Elongation factor Tu GTP binding domain TPH_RS05670 PF02033 Ribosome-binding factor A TPH_RS05675 PF01368 DHH family TPH_RS05675 PF02272 DHHA1 domain TPH_RS05680 PF16198 tRNA pseudouridylate synthase B C-terminal domain TPH_RS05680 PF01509 TruB family pseudouridylate synthase (N terminal domain) TPH_RS05685 PF06574 FAD synthetase TPH_RS05685 PF01687 Riboflavin kinase TPH_RS05690 PF00312 Ribosomal protein S15 TPH_RS05695 PF03725 3' exoribonuclease family, domain 2 TPH_RS05695 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TPH_RS05695 PF00575 S1 RNA binding domain TPH_RS05695 PF00013 KH domain TPH_RS05695 PF01138 3' exoribonuclease family, domain 1 TPH_RS05700 PF01522 Polysaccharide deacetylase TPH_RS05710 PF05193 Peptidase M16 inactive domain TPH_RS05710 PF00675 Insulinase (Peptidase family M16) TPH_RS05715 PF05239 PRC-barrel domain TPH_RS05720 PF05173 Dihydrodipicolinate reductase, C-terminus TPH_RS05720 PF01113 Dihydrodipicolinate reductase, N-terminus TPH_RS05725 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TPH_RS05725 PF16924 Dipicolinate synthase subunit A N-terminal domain TPH_RS05730 PF02441 Flavoprotein TPH_RS05735 PF02774 Semialdehyde dehydrogenase, dimerisation domain TPH_RS05735 PF01118 Semialdehyde dehydrogenase, NAD binding domain TPH_RS05740 PF00701 Dihydrodipicolinate synthetase family TPH_RS05745 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TPH_RS05745 PF17770 Ribonuclease J C-terminal domain TPH_RS05745 PF00753 Metallo-beta-lactamase superfamily TPH_RS05765 PF00574 Clp protease TPH_RS05770 PF13491 4TM region of DNA translocase FtsK/SpoIIIE TPH_RS05770 PF17854 FtsK alpha domain TPH_RS05770 PF01580 FtsK/SpoIIIE family TPH_RS05770 PF09397 Ftsk gamma domain TPH_RS05775 PF00294 pfkB family carbohydrate kinase TPH_RS05780 PF13464 Domain of unknown function (DUF4115) TPH_RS05785 PF00919 Uncharacterized protein family UPF0004 TPH_RS05785 PF18693 TRAM domain TPH_RS05785 PF04055 Radical SAM superfamily TPH_RS05795 PF00004 ATPase family associated with various cellular activities (AAA) TPH_RS05795 PF17862 AAA+ lid domain TPH_RS05795 PF01434 Peptidase family M41 TPH_RS05800 PF02464 Competence-damaged protein TPH_RS05800 PF00994 Probable molybdopterin binding domain TPH_RS05800 PF18146 Damage-inducible protein CinA KH domain TPH_RS05810 PF00154 recA bacterial DNA recombination protein TPH_RS05815 PF12072 Domain of unknown function (DUF3552) TPH_RS05815 PF01966 HD domain TPH_RS05815 PF00013 KH domain TPH_RS05825 PF13277 YmdB-like protein TPH_RS05830 PF04232 Stage V sporulation protein S (SpoVS) TPH_RS05835 PF01244 Membrane dipeptidase (Peptidase family M19) TPH_RS05845 PF00877 NlpC/P60 family TPH_RS05860 PF13649 Methyltransferase domain TPH_RS05865 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TPH_RS05870 PF02654 Cobalamin-5-phosphate synthase TPH_RS05875 PF00300 Histidine phosphatase superfamily (branch 1) TPH_RS05880 PF00478 IMP dehydrogenase / GMP reductase domain TPH_RS05880 PF00571 CBS domain TPH_RS05885 PF00004 ATPase family associated with various cellular activities (AAA) TPH_RS05885 PF07724 AAA domain (Cdc48 subfamily) TPH_RS05885 PF17871 AAA lid domain TPH_RS05885 PF02861 Clp amino terminal domain, pathogenicity island component TPH_RS05885 PF10431 C-terminal, D2-small domain, of ClpB protein TPH_RS05895 PF02308 MgtC family TPH_RS05900 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) TPH_RS05915 PF00534 Glycosyl transferases group 1 TPH_RS05915 PF08323 Starch synthase catalytic domain TPH_RS05920 PF00905 Penicillin binding protein transpeptidase domain TPH_RS05920 PF00912 Transglycosylase TPH_RS05945 PF00717 Peptidase S24-like TPH_RS05945 PF01726 LexA DNA binding domain TPH_RS06045 PF00176 SNF2 family N-terminal domain TPH_RS06045 PF00271 Helicase conserved C-terminal domain TPH_RS06135 PF13614 AAA domain TPH_RS06150 PF01548 Transposase TPH_RS06150 PF02371 Transposase IS116/IS110/IS902 family TPH_RS06165 PF00005 ABC transporter TPH_RS06170 PF07690 Major Facilitator Superfamily TPH_RS06175 PF02075 Crossover junction endodeoxyribonuclease RuvC TPH_RS06180 PF01330 RuvA N terminal domain TPH_RS06180 PF07499 RuvA, C-terminal domain TPH_RS06185 PF05491 RuvB C-terminal winged helix domain TPH_RS06185 PF17864 RuvB AAA lid domain TPH_RS06185 PF05496 Holliday junction DNA helicase RuvB P-loop domain TPH_RS06190 PF02677 Epoxyqueuosine reductase QueH TPH_RS06195 PF11146 Protein of unknown function (DUF2905) TPH_RS06205 PF04122 Putative cell wall binding repeat 2 TPH_RS06205 PF08486 Stage II sporulation protein TPH_RS06215 PF01702 Queuine tRNA-ribosyltransferase TPH_RS06225 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TPH_RS06235 PF07549 SecD/SecF GG Motif TPH_RS06235 PF02355 Protein export membrane protein TPH_RS06240 PF07549 SecD/SecF GG Motif TPH_RS06240 PF02355 Protein export membrane protein TPH_RS06245 PF02277 Phosphoribosyltransferase TPH_RS06250 PF16916 Dimerisation domain of Zinc Transporter TPH_RS06250 PF01545 Cation efflux family TPH_RS06260 PF04607 Region found in RelA / SpoT proteins TPH_RS06260 PF02824 TGS domain TPH_RS06260 PF13291 ACT domain TPH_RS06265 PF02580 D-Tyr-tRNA(Tyr) deacylase TPH_RS06270 PF00753 Metallo-beta-lactamase superfamily TPH_RS06275 PF03129 Anticodon binding domain TPH_RS06275 PF13393 Histidyl-tRNA synthetase TPH_RS06280 PF02938 GAD domain TPH_RS06280 PF00152 tRNA synthetases class II (D, K and N) TPH_RS06280 PF01336 OB-fold nucleic acid binding domain TPH_RS06285 PF00501 AMP-binding enzyme TPH_RS06285 PF14535 AMP-binding enzyme C-terminal domain TPH_RS06295 PF04389 Peptidase family M28 TPH_RS06305 PF02381 MraZ protein, putative antitoxin-like TPH_RS06310 PF01795 MraW methylase family TPH_RS06325 PF02875 Mur ligase family, glutamate ligase domain TPH_RS06325 PF01225 Mur ligase family, catalytic domain TPH_RS06325 PF08245 Mur ligase middle domain TPH_RS06330 PF08245 Mur ligase middle domain TPH_RS06330 PF01225 Mur ligase family, catalytic domain TPH_RS06330 PF02875 Mur ligase family, glutamate ligase domain TPH_RS06335 PF00953 Glycosyl transferase family 4 TPH_RS06335 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TPH_RS06340 PF02875 Mur ligase family, glutamate ligase domain TPH_RS06340 PF08245 Mur ligase middle domain TPH_RS06345 PF01098 Cell cycle protein TPH_RS06350 PF04101 Glycosyltransferase family 28 C-terminal domain TPH_RS06350 PF03033 Glycosyltransferase family 28 N-terminal domain TPH_RS06355 PF08245 Mur ligase middle domain TPH_RS06355 PF01225 Mur ligase family, catalytic domain TPH_RS06355 PF02875 Mur ligase family, glutamate ligase domain TPH_RS06360 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TPH_RS06360 PF01565 FAD binding domain TPH_RS06365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TPH_RS06370 PF03799 Cell division protein FtsQ TPH_RS06370 PF08478 POTRA domain, FtsQ-type TPH_RS06375 PF02491 SHS2 domain inserted in FTSA TPH_RS06380 PF00091 Tubulin/FtsZ family, GTPase domain TPH_RS06380 PF12327 FtsZ family, C-terminal domain TPH_RS06385 PF03419 Sporulation factor SpoIIGA TPH_RS06390 PF04545 Sigma-70, region 4 TPH_RS06390 PF04542 Sigma-70 region 2 TPH_RS06395 PF04539 Sigma-70 region 3 TPH_RS06395 PF04545 Sigma-70, region 4 TPH_RS06395 PF04542 Sigma-70 region 2 TPH_RS06400 PF09551 Stage II sporulation protein R (spore_II_R) TPH_RS06405 PF05239 PRC-barrel domain TPH_RS06410 PF03477 ATP cone domain TPH_RS06415 PF03477 ATP cone domain TPH_RS06415 PF13597 Anaerobic ribonucleoside-triphosphate reductase TPH_RS06420 PF01555 DNA methylase TPH_RS06425 PF04055 Radical SAM superfamily TPH_RS06430 PF02578 Multi-copper polyphenol oxidoreductase laccase TPH_RS06445 PF01168 Alanine racemase, N-terminal domain TPH_RS06450 PF04472 Cell division protein SepF TPH_RS06455 PF14748 Pyrroline-5-carboxylate reductase dimerisation TPH_RS06455 PF03807 NADP oxidoreductase coenzyme F420-dependent TPH_RS06460 PF02325 YGGT family TPH_RS06465 PF02594 Uncharacterised ACR, YggU family COG1872 TPH_RS06475 PF08264 Anticodon-binding domain of tRNA TPH_RS06475 PF00133 tRNA synthetases class I (I, L, M and V) TPH_RS06475 PF06827 Zinc finger found in FPG and IleRS TPH_RS06485 PF05167 Uncharacterised ACR (DUF711) TPH_RS06500 PF00534 Glycosyl transferases group 1 TPH_RS06500 PF13439 Glycosyltransferase Family 4 TPH_RS06505 PF01252 Signal peptidase (SPase) II TPH_RS06510 PF01479 S4 domain TPH_RS06510 PF00849 RNA pseudouridylate synthase TPH_RS06515 PF03951 Glutamine synthetase, beta-Grasp domain TPH_RS06515 PF00120 Glutamine synthetase, catalytic domain TPH_RS06520 PF00120 Glutamine synthetase, catalytic domain TPH_RS06520 PF03951 Glutamine synthetase, beta-Grasp domain TPH_RS06525 PF03861 ANTAR domain TPH_RS06525 PF00072 Response regulator receiver domain TPH_RS06540 PF00817 impB/mucB/samB family TPH_RS06540 PF11799 impB/mucB/samB family C-terminal domain TPH_RS06540 PF11798 IMS family HHH motif TPH_RS06545 PF01171 PP-loop family TPH_RS06550 PF03576 Peptidase family S58 TPH_RS06585 PF06782 Uncharacterised protein family (UPF0236) TPH_RS06600 PF01820 D-ala D-ala ligase N-terminus TPH_RS06600 PF07478 D-ala D-ala ligase C-terminus TPH_RS06615 PF01171 PP-loop family TPH_RS06620 PF00588 SpoU rRNA Methylase family TPH_RS06640 PF02525 Flavodoxin-like fold TPH_RS06645 PF00390 Malic enzyme, N-terminal domain TPH_RS06645 PF03949 Malic enzyme, NAD binding domain TPH_RS06650 PF17768 RecJ OB domain TPH_RS06650 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TPH_RS06650 PF02272 DHHA1 domain TPH_RS06650 PF01368 DHH family TPH_RS06655 PF00202 Aminotransferase class-III TPH_RS06670 PF01925 Sulfite exporter TauE/SafE TPH_RS06675 PF05198 Translation initiation factor IF-3, N-terminal domain TPH_RS06675 PF00707 Translation initiation factor IF-3, C-terminal domain TPH_RS06680 PF01632 Ribosomal protein L35 TPH_RS06685 PF00453 Ribosomal protein L20 TPH_RS06690 PF08032 RNA 2'-O ribose methyltransferase substrate binding TPH_RS06690 PF00588 SpoU rRNA Methylase family TPH_RS06695 PF01409 tRNA synthetases class II core domain (F) TPH_RS06695 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TPH_RS06700 PF03483 B3/4 domain TPH_RS06700 PF03484 tRNA synthetase B5 domain TPH_RS06700 PF03147 Ferredoxin-fold anticodon binding domain TPH_RS06700 PF01588 Putative tRNA binding domain TPH_RS06700 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TPH_RS06705 PF05164 Cell division protein ZapA TPH_RS06710 PF14791 DNA polymerase beta thumb TPH_RS06710 PF14716 Helix-hairpin-helix domain TPH_RS06710 PF02811 PHP domain TPH_RS06720 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TPH_RS06725 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TPH_RS06730 PF02641 Uncharacterized ACR, COG1993 TPH_RS06735 PF01136 Peptidase family U32 TPH_RS06735 PF16325 Peptidase family U32 C-terminal domain TPH_RS06740 PF01713 Smr domain TPH_RS06740 PF00488 MutS domain V TPH_RS06745 PF02586 SOS response associated peptidase (SRAP) TPH_RS06750 PF01661 Macro domain TPH_RS06750 PF12002 MgsA AAA+ ATPase C terminal TPH_RS06750 PF05496 Holliday junction DNA helicase RuvB P-loop domain TPH_RS06750 PF16193 AAA C-terminal domain TPH_RS06755 PF02146 Sir2 family TPH_RS06770 PF01894 Uncharacterised protein family UPF0047 TPH_RS06775 PF01894 Uncharacterised protein family UPF0047 TPH_RS06790 PF03734 L,D-transpeptidase catalytic domain TPH_RS06815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TPH_RS06815 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPH_RS06820 PF14537 Cytochrome c3 TPH_RS06820 PF00890 FAD binding domain TPH_RS06825 PF01548 Transposase TPH_RS06825 PF02371 Transposase IS116/IS110/IS902 family TPH_RS06830 PF01522 Polysaccharide deacetylase TPH_RS06850 PF01726 LexA DNA binding domain TPH_RS06850 PF00717 Peptidase S24-like TPH_RS06860 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TPH_RS06865 PF01039 Carboxyl transferase domain TPH_RS06865 PF17848 Acetyl-coA carboxylase zinc finger domain TPH_RS06870 PF07977 FabA-like domain TPH_RS06875 PF00109 Beta-ketoacyl synthase, N-terminal domain TPH_RS06875 PF02801 Beta-ketoacyl synthase, C-terminal domain TPH_RS06885 PF00698 Acyl transferase domain TPH_RS06890 PF03060 Nitronate monooxygenase TPH_RS06895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TPH_RS06895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TPH_RS06905 PF00004 ATPase family associated with various cellular activities (AAA) TPH_RS06905 PF17866 AAA lid domain TPH_RS06910 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS06915 PF00005 ABC transporter TPH_RS06920 PF00005 ABC transporter TPH_RS06925 PF00872 Transposase, Mutator family TPH_RS06930 PF17209 Hfq protein TPH_RS06940 PF01119 DNA mismatch repair protein, C-terminal domain TPH_RS06940 PF08676 MutL C terminal dimerisation domain TPH_RS06945 PF00850 Histone deacetylase domain TPH_RS06955 PF05190 MutS family domain IV TPH_RS06955 PF05192 MutS domain III TPH_RS06955 PF00488 MutS domain V TPH_RS06955 PF01624 MutS domain I TPH_RS06955 PF05188 MutS domain II TPH_RS06960 PF06133 Control of competence regulator ComK, YlbF/YmcA TPH_RS06965 PF04055 Radical SAM superfamily TPH_RS06965 PF00919 Uncharacterized protein family UPF0004 TPH_RS06965 PF01938 TRAM domain TPH_RS07010 PF12850 Calcineurin-like phosphoesterase superfamily domain TPH_RS07015 PF00885 6,7-dimethyl-8-ribityllumazine synthase TPH_RS07020 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TPH_RS07020 PF00925 GTP cyclohydrolase II TPH_RS07025 PF00677 Lumazine binding domain TPH_RS07030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TPH_RS07030 PF01872 RibD C-terminal domain TPH_RS07105 PF00834 Ribulose-phosphate 3 epimerase family TPH_RS07110 PF16745 RsgA N-terminal domain TPH_RS07110 PF03193 RsgA GTPase TPH_RS07115 PF03793 PASTA domain TPH_RS07115 PF00069 Protein kinase domain TPH_RS07120 PF00905 Penicillin binding protein transpeptidase domain TPH_RS07125 PF01098 Cell cycle protein TPH_RS07135 PF01189 16S rRNA methyltransferase RsmB/F TPH_RS07135 PF01029 NusB family TPH_RS07140 PF00551 Formyl transferase TPH_RS07140 PF02911 Formyl transferase, C-terminal domain TPH_RS07145 PF01327 Polypeptide deformylase TPH_RS07150 PF18074 Primosomal protein N C-terminal domain TPH_RS07150 PF00271 Helicase conserved C-terminal domain TPH_RS07150 PF04851 Type III restriction enzyme, res subunit TPH_RS07150 PF17764 3′ DNA-binding domain (3′BD) TPH_RS07150 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TPH_RS07155 PF02773 S-adenosylmethionine synthetase, C-terminal domain TPH_RS07155 PF02772 S-adenosylmethionine synthetase, central domain TPH_RS07155 PF00438 S-adenosylmethionine synthetase, N-terminal domain TPH_RS07160 PF04127 DNA / pantothenate metabolism flavoprotein TPH_RS07160 PF02441 Flavoprotein TPH_RS07165 PF01192 RNA polymerase Rpb6 TPH_RS07170 PF00625 Guanylate kinase TPH_RS07175 PF04025 Domain of unknown function (DUF370) TPH_RS07180 PF08340 Domain of unknown function (DUF1732) TPH_RS07180 PF03755 YicC-like family, N-terminal region TPH_RS07185 PF00155 Aminotransferase class I and II TPH_RS07190 PF01678 Diaminopimelate epimerase TPH_RS07195 PF05670 NFACT protein RNA binding domain TPH_RS07200 PF03551 Transcriptional regulator PadR-like family TPH_RS07205 PF00156 Phosphoribosyl transferase domain TPH_RS07210 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TPH_RS07215 PF01180 Dihydroorotate dehydrogenase TPH_RS07220 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TPH_RS07220 PF00970 Oxidoreductase FAD-binding domain TPH_RS07220 PF00175 Oxidoreductase NAD-binding domain TPH_RS07225 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TPH_RS07225 PF02142 MGS-like domain TPH_RS07225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TPH_RS07230 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TPH_RS07230 PF00117 Glutamine amidotransferase class-I TPH_RS07235 PF01979 Amidohydrolase family TPH_RS07240 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TPH_RS07240 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TPH_RS07245 PF00156 Phosphoribosyl transferase domain TPH_RS07255 PF11871 Domain of unknown function (DUF3391) TPH_RS07255 PF01966 HD domain TPH_RS07260 PF00403 Heavy-metal-associated domain TPH_RS07265 PF01022 Bacterial regulatory protein, arsR family TPH_RS07345 PF04397 LytTr DNA-binding domain TPH_RS07345 PF00072 Response regulator receiver domain TPH_RS07355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS07355 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TPH_RS07425 PF03144 Elongation factor Tu domain 2 TPH_RS07425 PF03764 Elongation factor G, domain IV TPH_RS07425 PF00009 Elongation factor Tu GTP binding domain TPH_RS07425 PF14492 Elongation Factor G, domain II TPH_RS07425 PF00679 Elongation factor G C-terminus TPH_RS07435 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TPH_RS07435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS07435 PF00384 Molybdopterin oxidoreductase TPH_RS07435 PF13237 4Fe-4S dicluster domain TPH_RS07435 PF01568 Molydopterin dinucleotide binding domain TPH_RS07440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPH_RS07440 PF00037 4Fe-4S binding domain TPH_RS07440 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS07460 PF01975 Survival protein SurE TPH_RS07465 PF01227 GTP cyclohydrolase I TPH_RS07475 PF01475 Ferric uptake regulator family TPH_RS07480 PF00486 Transcriptional regulatory protein, C terminal TPH_RS07480 PF00072 Response regulator receiver domain TPH_RS07505 PF00155 Aminotransferase class I and II TPH_RS07510 PF17284 Spermidine synthase tetramerisation domain TPH_RS07515 PF08299 Bacterial dnaA protein helix-turn-helix TPH_RS07515 PF11638 DnaA N-terminal domain TPH_RS07515 PF00308 Bacterial dnaA protein TPH_RS07520 PF07261 Replication initiation and membrane attachment TPH_RS07530 PF00155 Aminotransferase class I and II TPH_RS07540 PF01593 Flavin containing amine oxidoreductase TPH_RS07560 PF00809 Pterin binding enzyme TPH_RS07565 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit TPH_RS07575 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit TPH_RS07575 PF04060 Putative Fe-S cluster TPH_RS07580 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain TPH_RS07580 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit TPH_RS07585 PF03063 Prismane/CO dehydrogenase family TPH_RS07590 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TPH_RS07595 PF03109 ABC1 family TPH_RS07600 PF02645 Uncharacterised protein, DegV family COG1307 TPH_RS07615 PF02491 SHS2 domain inserted in FTSA TPH_RS07620 PF03705 CheR methyltransferase, all-alpha domain TPH_RS07620 PF01739 CheR methyltransferase, SAM binding domain TPH_RS07625 PF00202 Aminotransferase class-III TPH_RS07630 PF17805 AsnC-like ligand binding domain TPH_RS07635 PF04055 Radical SAM superfamily TPH_RS07635 PF13186 Iron-sulfur cluster-binding domain TPH_RS07640 PF00490 Delta-aminolevulinic acid dehydratase TPH_RS07645 PF13186 Iron-sulfur cluster-binding domain TPH_RS07645 PF04055 Radical SAM superfamily TPH_RS07650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPH_RS07650 PF02602 Uroporphyrinogen-III synthase HemD TPH_RS07655 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TPH_RS07655 PF03900 Porphobilinogen deaminase, C-terminal domain TPH_RS07660 PF01488 Shikimate / quinate 5-dehydrogenase TPH_RS07660 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TPH_RS07660 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TPH_RS07665 PF10414 Sirohaem synthase dimerisation region TPH_RS07665 PF14824 Sirohaem biosynthesis protein central TPH_RS07665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPH_RS07680 PF09163 Formate dehydrogenase N, transmembrane TPH_RS07680 PF13247 4Fe-4S dicluster domain TPH_RS07685 PF00384 Molybdopterin oxidoreductase TPH_RS07685 PF01568 Molydopterin dinucleotide binding domain TPH_RS07685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS07690 PF00384 Molybdopterin oxidoreductase TPH_RS07690 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS07690 PF01568 Molydopterin dinucleotide binding domain TPH_RS07695 PF00902 Sec-independent protein translocase protein (TatC) TPH_RS07700 PF00348 Polyprenyl synthetase TPH_RS07705 PF02441 Flavoprotein TPH_RS07710 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TPH_RS07720 PF02754 Cysteine-rich domain TPH_RS07730 PF02675 S-adenosylmethionine decarboxylase TPH_RS07740 PF13439 Glycosyltransferase Family 4 TPH_RS07740 PF00534 Glycosyl transferases group 1 TPH_RS07750 PF00696 Amino acid kinase family TPH_RS07750 PF13840 ACT domain TPH_RS07755 PF08544 GHMP kinases C terminal TPH_RS07755 PF00288 GHMP kinases N terminal domain TPH_RS07760 PF00291 Pyridoxal-phosphate dependent enzyme TPH_RS07765 PF03447 Homoserine dehydrogenase, NAD binding domain TPH_RS07765 PF00742 Homoserine dehydrogenase TPH_RS07765 PF01842 ACT domain TPH_RS07770 PF09547 Stage IV sporulation protein A (spore_IV_A) TPH_RS07775 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TPH_RS07775 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TPH_RS07780 PF02660 Glycerol-3-phosphate acyltransferase TPH_RS07785 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TPH_RS07785 PF01926 50S ribosome-binding GTPase TPH_RS07805 PF14045 YIEGIA protein TPH_RS07820 PF12804 MobA-like NTP transferase domain TPH_RS07830 PF02401 LytB protein TPH_RS07830 PF00575 S1 RNA binding domain TPH_RS07835 PF01553 Acyltransferase TPH_RS07840 PF02224 Cytidylate kinase TPH_RS07845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TPH_RS07850 PF00793 DAHP synthetase I family TPH_RS07850 PF18152 DAHP synthase ferredoxin-like domain TPH_RS07855 PF13237 4Fe-4S dicluster domain TPH_RS07860 PF07736 Chorismate mutase type I TPH_RS07880 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TPH_RS07880 PF12557 Cob(I)alamin adenosyltransferase N terminal TPH_RS07885 PF00005 ABC transporter TPH_RS07890 PF01032 FecCD transport family TPH_RS07895 PF01497 Periplasmic binding protein TPH_RS07900 PF01479 S4 domain TPH_RS07900 PF00849 RNA pseudouridylate synthase TPH_RS07905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPH_RS07905 PF00672 HAMP domain TPH_RS07905 PF02743 Cache domain TPH_RS07910 PF07670 Nucleoside recognition TPH_RS07915 PF07670 Nucleoside recognition TPH_RS07920 PF00768 D-alanyl-D-alanine carboxypeptidase TPH_RS07920 PF07943 Penicillin-binding protein 5, C-terminal domain TPH_RS07925 PF09579 Sporulation protein YtfJ (Spore_YtfJ) TPH_RS07935 PF04079 Segregation and condensation complex subunit ScpB TPH_RS07940 PF02616 Segregation and condensation protein ScpA TPH_RS07945 PF00579 tRNA synthetases class I (W and Y) TPH_RS07950 PF02163 Peptidase family M50 TPH_RS07955 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TPH_RS07955 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TPH_RS07960 PF01869 BadF/BadG/BcrA/BcrD ATPase family TPH_RS07975 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TPH_RS07980 PF07451 Stage V sporulation protein AD (SpoVAD) TPH_RS07985 PF03862 SpoVAC/SpoVAEB sporulation membrane protein TPH_RS07995 PF04542 Sigma-70 region 2 TPH_RS07995 PF04545 Sigma-70, region 4 TPH_RS07995 PF04539 Sigma-70 region 3 TPH_RS08000 PF13581 Histidine kinase-like ATPase domain TPH_RS08005 PF01740 STAS domain TPH_RS08010 PF00768 D-alanyl-D-alanine carboxypeptidase TPH_RS08010 PF07943 Penicillin-binding protein 5, C-terminal domain TPH_RS08015 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TPH_RS08015 PF00591 Glycosyl transferase family, a/b domain TPH_RS08015 PF02885 Glycosyl transferase family, helical bundle domain TPH_RS08020 PF01676 Metalloenzyme superfamily TPH_RS08025 PF00589 Phage integrase family TPH_RS08025 PF02899 Phage integrase, N-terminal SAM-like domain TPH_RS08035 PF01944 Stage II sporulation protein M TPH_RS08050 PF00293 NUDIX domain TPH_RS08060 PF07687 Peptidase dimerisation domain TPH_RS08060 PF01546 Peptidase family M20/M25/M40 TPH_RS08065 PF00953 Glycosyl transferase family 4 TPH_RS08065 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TPH_RS08070 PF00535 Glycosyl transferase family 2 TPH_RS08085 PF08769 Sporulation initiation factor Spo0A C terminal TPH_RS08085 PF00072 Response regulator receiver domain TPH_RS08090 PF05580 SpoIVB peptidase S55 TPH_RS08090 PF17820 PDZ domain TPH_RS08095 PF02463 RecF/RecN/SMC N terminal domain TPH_RS08100 PF01316 Arginine repressor, DNA binding domain TPH_RS08100 PF02863 Arginine repressor, C-terminal domain TPH_RS08105 PF01513 ATP-NAD kinase TPH_RS08110 PF01728 FtsJ-like methyltransferase TPH_RS08110 PF01479 S4 domain TPH_RS08115 PF02780 Transketolase, C-terminal domain TPH_RS08115 PF02779 Transketolase, pyrimidine binding domain TPH_RS08115 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TPH_RS08125 PF00348 Polyprenyl synthetase TPH_RS08130 PF02609 Exonuclease VII small subunit TPH_RS08135 PF13742 OB-fold nucleic acid binding domain TPH_RS08135 PF02601 Exonuclease VII, large subunit TPH_RS08140 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TPH_RS08140 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TPH_RS08145 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TPH_RS08145 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TPH_RS08150 PF01029 NusB family TPH_RS08165 PF03780 Asp23 family, cell envelope-related function TPH_RS08170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TPH_RS08170 PF00289 Biotin carboxylase, N-terminal domain TPH_RS08170 PF02785 Biotin carboxylase C-terminal domain TPH_RS08175 PF02436 Conserved carboxylase domain TPH_RS08175 PF00682 HMGL-like TPH_RS08175 PF00364 Biotin-requiring enzyme TPH_RS08195 PF09546 Stage III sporulation protein AE (spore_III_AE) TPH_RS08200 PF06686 Stage III sporulation protein AC/AD protein family TPH_RS08205 PF06686 Stage III sporulation protein AC/AD protein family TPH_RS08225 PF09285 Elongation factor P, C-terminal TPH_RS08225 PF08207 Elongation factor P (EF-P) KOW-like domain TPH_RS08225 PF01132 Elongation factor P (EF-P) OB domain TPH_RS08230 PF01321 Creatinase/Prolidase N-terminal domain TPH_RS08230 PF00557 Metallopeptidase family M24 TPH_RS08235 PF01220 Dehydroquinase class II TPH_RS08240 PF01523 Putative modulator of DNA gyrase TPH_RS08245 PF01523 Putative modulator of DNA gyrase TPH_RS08255 PF06750 Bacterial Peptidase A24 N-terminal domain TPH_RS08255 PF01478 Type IV leader peptidase family TPH_RS08270 PF02491 SHS2 domain inserted in FTSA TPH_RS08295 PF07963 Prokaryotic N-terminal methylation motif TPH_RS08295 PF08334 Type II secretion system (T2SS), protein G TPH_RS08300 PF00482 Type II secretion system (T2SS), protein F TPH_RS08305 PF00437 Type II/IV secretion system protein TPH_RS08310 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TPH_RS08310 PF00437 Type II/IV secretion system protein TPH_RS08315 PF00437 Type II/IV secretion system protein TPH_RS08320 PF01761 3-dehydroquinate synthase TPH_RS08325 PF01202 Shikimate kinase TPH_RS08330 PF01264 Chorismate synthase TPH_RS08335 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TPH_RS08335 PF08501 Shikimate dehydrogenase substrate binding domain TPH_RS08335 PF01488 Shikimate / quinate 5-dehydrogenase TPH_RS08340 PF01339 CheB methylesterase TPH_RS08340 PF00072 Response regulator receiver domain TPH_RS08370 PF04545 Sigma-70, region 4 TPH_RS08370 PF04542 Sigma-70 region 2 TPH_RS08375 PF07508 Recombinase TPH_RS08375 PF00239 Resolvase, N terminal domain TPH_RS08375 PF13408 Recombinase zinc beta ribbon domain TPH_RS08390 PF04545 Sigma-70, region 4 TPH_RS08390 PF04542 Sigma-70 region 2 TPH_RS08400 PF00905 Penicillin binding protein transpeptidase domain TPH_RS08400 PF03717 Penicillin-binding Protein dimerisation domain TPH_RS08405 PF02618 YceG-like family TPH_RS08410 PF04294 VanW like protein TPH_RS08415 PF06949 Protein of unknown function (DUF1292) TPH_RS08420 PF03652 Holliday junction resolvase TPH_RS08425 PF00248 Aldo/keto reductase family TPH_RS08430 PF06135 IreB regulatory phosphoprotein TPH_RS08435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TPH_RS08435 PF01411 tRNA synthetases class II (A) TPH_RS08435 PF02272 DHHA1 domain TPH_RS08450 PF05872 Bacterial protein of unknown function (DUF853) TPH_RS08460 PF03793 PASTA domain TPH_RS08460 PF00069 Protein kinase domain TPH_RS08465 PF01507 Phosphoadenosine phosphosulfate reductase family TPH_RS08480 PF01546 Peptidase family M20/M25/M40 TPH_RS08480 PF07687 Peptidase dimerisation domain TPH_RS08495 PF00881 Nitroreductase family TPH_RS08500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPH_RS08500 PF00005 ABC transporter TPH_RS08505 PF00005 ABC transporter TPH_RS08505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPH_RS08510 PF12911 N-terminal TM domain of oligopeptide transport permease C TPH_RS08510 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS08515 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS08520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPH_RS08535 PF03313 Serine dehydratase alpha chain TPH_RS08540 PF03315 Serine dehydratase beta chain TPH_RS08540 PF01842 ACT domain TPH_RS08545 PF04260 Protein of unknown function (DUF436) TPH_RS08550 PF10437 Bacterial lipoate protein ligase C-terminus TPH_RS08550 PF03099 Biotin/lipoate A/B protein ligase family TPH_RS08555 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPH_RS08555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TPH_RS08560 PF02347 Glycine cleavage system P-protein TPH_RS08565 PF02347 Glycine cleavage system P-protein TPH_RS08570 PF01597 Glycine cleavage H-protein TPH_RS08575 PF08669 Glycine cleavage T-protein C-terminal barrel domain TPH_RS08575 PF01571 Aminomethyltransferase folate-binding domain TPH_RS08590 PF01594 AI-2E family transporter TPH_RS08615 PF00266 Aminotransferase class-V TPH_RS08620 PF00004 ATPase family associated with various cellular activities (AAA) TPH_RS08620 PF16193 AAA C-terminal domain TPH_RS08620 PF12002 MgsA AAA+ ATPase C terminal TPH_RS08625 PF00085 Thioredoxin TPH_RS08640 PF17863 AAA lid domain TPH_RS08640 PF01078 Magnesium chelatase, subunit ChlI TPH_RS08650 PF01134 Glucose inhibited division protein A TPH_RS08650 PF13932 GidA associated domain TPH_RS08665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS08665 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TPH_RS08675 PF00072 Response regulator receiver domain TPH_RS08675 PF04397 LytTr DNA-binding domain TPH_RS08700 PF00872 Transposase, Mutator family TPH_RS08710 PF00196 Bacterial regulatory proteins, luxR family TPH_RS08710 PF00072 Response regulator receiver domain TPH_RS08775 PF06782 Uncharacterised protein family (UPF0236) TPH_RS08780 PF00749 tRNA synthetases class I (E and Q), catalytic domain TPH_RS08805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TPH_RS08805 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPH_RS08810 PF01022 Bacterial regulatory protein, arsR family TPH_RS08845 PF02581 Thiamine monophosphate synthase TPH_RS08850 PF02110 Hydroxyethylthiazole kinase family TPH_RS08860 PF08543 Phosphomethylpyrimidine kinase TPH_RS08860 PF02581 Thiamine monophosphate synthase TPH_RS08865 PF01910 Thiamine-binding protein TPH_RS08870 PF01964 Radical SAM ThiC family TPH_RS08875 PF02581 Thiamine monophosphate synthase TPH_RS08885 PF06968 Biotin and Thiamin Synthesis associated domain TPH_RS08885 PF04055 Radical SAM superfamily TPH_RS08890 PF05690 Thiazole biosynthesis protein ThiG TPH_RS08905 PF07690 Major Facilitator Superfamily TPH_RS08910 PF01980 tRNA-methyltransferase O TPH_RS08915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPH_RS08920 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS08925 PF12911 N-terminal TM domain of oligopeptide transport permease C TPH_RS08925 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS08930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPH_RS08930 PF00005 ABC transporter TPH_RS08935 PF00266 Aminotransferase class-V TPH_RS08945 PF01758 Sodium Bile acid symporter family TPH_RS08970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPH_RS08975 PF14698 Argininosuccinate lyase C-terminal TPH_RS08975 PF00206 Lyase TPH_RS08980 PF01464 Transglycosylase SLT domain TPH_RS08980 PF10145 Phage-related minor tail protein TPH_RS08980 PF01551 Peptidase family M23 TPH_RS08985 PF01121 Dephospho-CoA kinase TPH_RS08995 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TPH_RS08995 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TPH_RS08995 PF06827 Zinc finger found in FPG and IleRS TPH_RS09000 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TPH_RS09000 PF00476 DNA polymerase family A TPH_RS09000 PF01367 5'-3' exonuclease, C-terminal SAM fold TPH_RS09005 PF09587 Bacterial capsule synthesis protein PGA_cap TPH_RS09015 PF01709 Transcriptional regulator TPH_RS09020 PF02540 NAD synthase TPH_RS09045 PF02416 mttA/Hcf106 family TPH_RS09060 PF00857 Isochorismatase family TPH_RS09090 PF01479 S4 domain TPH_RS09090 PF00579 tRNA synthetases class I (W and Y) TPH_RS09095 PF00465 Iron-containing alcohol dehydrogenase TPH_RS09115 PF02653 Branched-chain amino acid transport system / permease component TPH_RS09120 PF00005 ABC transporter TPH_RS09120 PF08402 TOBE domain TPH_RS09135 PF01784 NIF3 (NGG1p interacting factor 3) TPH_RS09140 PF04816 tRNA (adenine(22)-N(1))-methyltransferase TPH_RS09145 PF14489 QueF-like protein TPH_RS09160 PF01568 Molydopterin dinucleotide binding domain TPH_RS09160 PF00384 Molybdopterin oxidoreductase TPH_RS09160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS09165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS09165 PF12838 4Fe-4S dicluster domain TPH_RS09165 PF00384 Molybdopterin oxidoreductase TPH_RS09165 PF01568 Molydopterin dinucleotide binding domain TPH_RS09165 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TPH_RS09170 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS09170 PF00037 4Fe-4S binding domain TPH_RS09170 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPH_RS09185 PF01471 Putative peptidoglycan binding domain TPH_RS09185 PF07486 Cell Wall Hydrolase TPH_RS09195 PF01790 Prolipoprotein diacylglyceryl transferase TPH_RS09200 PF00814 Glycoprotease family TPH_RS09210 PF00583 Acetyltransferase (GNAT) family TPH_RS09215 PF00814 Glycoprotease family TPH_RS09220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TPH_RS09225 PF01168 Alanine racemase, N-terminal domain TPH_RS09225 PF00842 Alanine racemase, C-terminal domain TPH_RS09230 PF03853 YjeF-related protein N-terminus TPH_RS09230 PF01256 Carbohydrate kinase TPH_RS09235 PF01648 4'-phosphopantetheinyl transferase superfamily TPH_RS09240 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPH_RS09240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TPH_RS09245 PF01584 CheW-like domain TPH_RS09250 PF06071 Protein of unknown function (DUF933) TPH_RS09250 PF01926 50S ribosome-binding GTPase TPH_RS09255 PF00248 Aldo/keto reductase family TPH_RS09260 PF01235 Sodium:alanine symporter family TPH_RS09275 PF02645 Uncharacterised protein, DegV family COG1307 TPH_RS09280 PF00753 Metallo-beta-lactamase superfamily TPH_RS09280 PF16123 Hydroxyacylglutathione hydrolase C-terminus TPH_RS09285 PF13419 Haloacid dehalogenase-like hydrolase TPH_RS09290 PF03553 Na+/H+ antiporter family TPH_RS09310 PF00633 Helix-hairpin-helix motif TPH_RS09310 PF00730 HhH-GPD superfamily base excision DNA repair protein TPH_RS09335 PF01869 BadF/BadG/BcrA/BcrD ATPase family TPH_RS09350 PF00440 Bacterial regulatory proteins, tetR family TPH_RS09350 PF18665 Tetracyclin repressor-like, C-terminal domain TPH_RS09370 PF17910 FeoB cytosolic helical domain TPH_RS09370 PF07670 Nucleoside recognition TPH_RS09370 PF07664 Ferrous iron transport protein B C terminus TPH_RS09370 PF02421 Ferrous iron transport protein B TPH_RS09375 PF07664 Ferrous iron transport protein B C terminus TPH_RS09375 PF17910 FeoB cytosolic helical domain TPH_RS09375 PF02421 Ferrous iron transport protein B TPH_RS09375 PF07670 Nucleoside recognition TPH_RS09395 PF17863 AAA lid domain TPH_RS09395 PF01078 Magnesium chelatase, subunit ChlI TPH_RS09425 PF01930 Domain of unknown function DUF83 TPH_RS09430 PF09827 CRISPR associated protein Cas2 TPH_RS09435 PF01867 CRISPR associated protein Cas1 TPH_RS09485 PF13193 AMP-binding enzyme C-terminal domain TPH_RS09485 PF00501 AMP-binding enzyme TPH_RS09500 PF00664 ABC transporter transmembrane region TPH_RS09500 PF00005 ABC transporter TPH_RS09505 PF00664 ABC transporter transmembrane region TPH_RS09505 PF00005 ABC transporter TPH_RS09510 PF01047 MarR family TPH_RS09515 PF00291 Pyridoxal-phosphate dependent enzyme TPH_RS09525 PF01022 Bacterial regulatory protein, arsR family TPH_RS09545 PF00266 Aminotransferase class-V TPH_RS09550 PF01592 NifU-like N terminal domain TPH_RS09555 PF01451 Low molecular weight phosphotyrosine protein phosphatase TPH_RS09560 PF01206 Sulfurtransferase TusA TPH_RS09585 PF01695 IstB-like ATP binding protein TPH_RS09590 PF01695 IstB-like ATP binding protein TPH_RS09595 PF00665 Integrase core domain TPH_RS09595 PF02796 Helix-turn-helix domain of resolvase TPH_RS09640 PF18755 Restriction Enzyme Adenine Methylase Associated TPH_RS09640 PF01555 DNA methylase TPH_RS09645 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TPH_RS09670 PF13426 PAS domain TPH_RS09670 PF02954 Bacterial regulatory protein, Fis family TPH_RS09670 PF00158 Sigma-54 interaction domain TPH_RS09685 PF10437 Bacterial lipoate protein ligase C-terminus TPH_RS09685 PF03099 Biotin/lipoate A/B protein ligase family TPH_RS09695 PF00753 Metallo-beta-lactamase superfamily TPH_RS09710 PF03099 Biotin/lipoate A/B protein ligase family TPH_RS09710 PF10437 Bacterial lipoate protein ligase C-terminus TPH_RS09715 PF01597 Glycine cleavage H-protein TPH_RS09720 PF10437 Bacterial lipoate protein ligase C-terminus TPH_RS09720 PF03099 Biotin/lipoate A/B protein ligase family TPH_RS09730 PF02754 Cysteine-rich domain TPH_RS09730 PF13183 4Fe-4S dicluster domain TPH_RS09740 PF01597 Glycine cleavage H-protein TPH_RS09750 PF00364 Biotin-requiring enzyme TPH_RS09750 PF02817 e3 binding domain TPH_RS09750 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TPH_RS09755 PF01513 ATP-NAD kinase TPH_RS09760 PF02780 Transketolase, C-terminal domain TPH_RS09760 PF02779 Transketolase, pyrimidine binding domain TPH_RS09765 PF00676 Dehydrogenase E1 component TPH_RS09770 PF00107 Zinc-binding dehydrogenase TPH_RS09770 PF08240 Alcohol dehydrogenase GroES-like domain TPH_RS09775 PF00872 Transposase, Mutator family TPH_RS09800 PF01380 SIS domain TPH_RS09805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TPH_RS09805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TPH_RS09805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TPH_RS09805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TPH_RS09815 PF02457 DisA bacterial checkpoint controller nucleotide-binding TPH_RS09830 PF06947 Protein of unknown function (DUF1290) TPH_RS09840 PF08502 LeuA allosteric (dimerisation) domain TPH_RS09840 PF00682 HMGL-like TPH_RS09845 PF00180 Isocitrate/isopropylmalate dehydrogenase TPH_RS09850 PF00694 Aconitase C-terminal domain TPH_RS09855 PF00330 Aconitase family (aconitate hydratase) TPH_RS09860 PF08502 LeuA allosteric (dimerisation) domain TPH_RS09860 PF00682 HMGL-like TPH_RS09865 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TPH_RS09865 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TPH_RS09870 PF10369 Small subunit of acetolactate synthase TPH_RS09875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPH_RS09875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPH_RS09875 PF00205 Thiamine pyrophosphate enzyme, central domain TPH_RS09880 PF00920 Dehydratase family TPH_RS09885 PF01063 Amino-transferase class IV TPH_RS09895 PF02915 Rubrerythrin TPH_RS09905 PF13408 Recombinase zinc beta ribbon domain TPH_RS09905 PF07508 Recombinase TPH_RS09905 PF00239 Resolvase, N terminal domain TPH_RS09935 PF06782 Uncharacterised protein family (UPF0236) TPH_RS09950 PF00072 Response regulator receiver domain TPH_RS09975 PF02371 Transposase IS116/IS110/IS902 family TPH_RS09975 PF01548 Transposase TPH_RS09985 PF02607 B12 binding domain TPH_RS09985 PF02310 B12 binding domain TPH_RS09990 PF10114 Sensory domain found in PocR TPH_RS09990 PF12833 Helix-turn-helix domain TPH_RS09995 PF02028 BCCT, betaine/carnitine/choline family transporter TPH_RS10000 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS10005 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TPH_RS10010 PF00571 CBS domain TPH_RS10010 PF00005 ABC transporter TPH_RS10015 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS10020 PF00534 Glycosyl transferases group 1 TPH_RS10020 PF13439 Glycosyltransferase Family 4 TPH_RS10045 PF05034 Methylaspartate ammonia-lyase N-terminus TPH_RS10045 PF07476 Methylaspartate ammonia-lyase C-terminus TPH_RS10050 PF06368 Methylaspartate mutase E chain (MutE) TPH_RS10055 PF13941 MutL protein TPH_RS10060 PF02310 B12 binding domain TPH_RS10065 PF02310 B12 binding domain TPH_RS10065 PF02607 B12 binding domain TPH_RS10070 PF06253 Trimethylamine methyltransferase (MTTB) TPH_RS10085 PF05544 Proline racemase TPH_RS10090 PF00474 Sodium:solute symporter family TPH_RS10095 PF17391 Urocanase N-terminal domain TPH_RS10095 PF17392 Urocanase C-terminal domain TPH_RS10095 PF01175 Urocanase Rossmann-like domain TPH_RS10100 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 TPH_RS10100 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain TPH_RS10115 PF04069 Substrate binding domain of ABC-type glycine betaine transport system TPH_RS10120 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS10125 PF00005 ABC transporter TPH_RS10125 PF00571 CBS domain TPH_RS10130 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS10135 PF13426 PAS domain TPH_RS10135 PF00158 Sigma-54 interaction domain TPH_RS10135 PF02954 Bacterial regulatory protein, Fis family TPH_RS10140 PF04961 Formiminotransferase-cyclodeaminase TPH_RS10145 PF02971 Formiminotransferase domain TPH_RS10145 PF07837 Formiminotransferase domain, N-terminal subdomain TPH_RS10150 PF01979 Amidohydrolase family TPH_RS10155 PF00221 Aromatic amino acid lyase TPH_RS10160 PF12704 MacB-like periplasmic core domain TPH_RS10160 PF02687 FtsX-like permease family TPH_RS10165 PF02687 FtsX-like permease family TPH_RS10165 PF12704 MacB-like periplasmic core domain TPH_RS10165 PF00005 ABC transporter TPH_RS10170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TPH_RS10180 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPH_RS10195 PF01063 Amino-transferase class IV TPH_RS10200 PF00425 chorismate binding enzyme TPH_RS10200 PF04715 Anthranilate synthase component I, N terminal region TPH_RS10205 PF00117 Glutamine amidotransferase class-I TPH_RS10210 PF02082 Transcriptional regulator TPH_RS10225 PF00072 Response regulator receiver domain TPH_RS10225 PF12833 Helix-turn-helix domain TPH_RS10230 PF00183 Hsp90 protein TPH_RS10240 PF02743 Cache domain TPH_RS10240 PF00672 HAMP domain TPH_RS10240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS10240 PF06580 Histidine kinase TPH_RS10245 PF02583 Metal-sensitive transcriptional repressor TPH_RS10255 PF00403 Heavy-metal-associated domain TPH_RS10305 PF00291 Pyridoxal-phosphate dependent enzyme TPH_RS10310 PF12804 MobA-like NTP transferase domain TPH_RS10310 PF01066 CDP-alcohol phosphatidyltransferase TPH_RS10315 PF01658 Myo-inositol-1-phosphate synthase TPH_RS10325 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TPH_RS10330 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TPH_RS10340 PF00271 Helicase conserved C-terminal domain TPH_RS10340 PF00176 SNF2 family N-terminal domain TPH_RS10345 PF00072 Response regulator receiver domain TPH_RS10345 PF01966 HD domain TPH_RS10360 PF00291 Pyridoxal-phosphate dependent enzyme TPH_RS10365 PF05067 Manganese containing catalase TPH_RS10370 PF12652 CotJB protein TPH_RS10390 PF08281 Sigma-70, region 4 TPH_RS10390 PF04542 Sigma-70 region 2 TPH_RS10395 PF00011 Hsp20/alpha crystallin family TPH_RS10410 PF00892 EamA-like transporter family TPH_RS10415 PF02632 BioY family TPH_RS10420 PF00005 ABC transporter TPH_RS10425 PF02361 Cobalt transport protein TPH_RS10440 PF01230 HIT domain TPH_RS10445 PF01938 TRAM domain TPH_RS10445 PF04055 Radical SAM superfamily TPH_RS10445 PF00919 Uncharacterized protein family UPF0004 TPH_RS10450 PF04452 RNA methyltransferase TPH_RS10455 PF00684 DnaJ central domain TPH_RS10455 PF00226 DnaJ domain TPH_RS10455 PF01556 DnaJ C terminal domain TPH_RS10460 PF00012 Hsp70 protein TPH_RS10465 PF01025 GrpE TPH_RS10470 PF01628 HrcA protein C terminal domain TPH_RS10475 PF04055 Radical SAM superfamily TPH_RS10475 PF06969 HemN C-terminal domain TPH_RS10480 PF00009 Elongation factor Tu GTP binding domain TPH_RS10480 PF06421 GTP-binding protein LepA C-terminus TPH_RS10480 PF00679 Elongation factor G C-terminus TPH_RS10480 PF03144 Elongation factor Tu domain 2 TPH_RS10485 PF03023 Lipid II flippase MurJ TPH_RS10525 PF01649 Ribosomal protein S20 TPH_RS10545 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TPH_RS10545 PF12706 Beta-lactamase superfamily domain TPH_RS10545 PF17770 Ribonuclease J C-terminal domain TPH_RS10550 PF13180 PDZ domain TPH_RS10555 PF02416 mttA/Hcf106 family TPH_RS10565 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TPH_RS10565 PF00374 Nickel-dependent hydrogenase TPH_RS10575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TPH_RS10585 PF13244 Domain of unknown function (DUF4040) TPH_RS10585 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TPH_RS10585 PF00361 Proton-conducting membrane transporter TPH_RS10595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TPH_RS10595 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TPH_RS10600 PF13603 Leucyl-tRNA synthetase, Domain 2 TPH_RS10600 PF00133 tRNA synthetases class I (I, L, M and V) TPH_RS10600 PF08264 Anticodon-binding domain of tRNA TPH_RS10630 PF01841 Transglutaminase-like superfamily TPH_RS10680 PF00072 Response regulator receiver domain TPH_RS10680 PF00196 Bacterial regulatory proteins, luxR family TPH_RS10685 PF11871 Domain of unknown function (DUF3391) TPH_RS10685 PF01966 HD domain TPH_RS10695 PF01966 HD domain TPH_RS10700 PF01467 Cytidylyltransferase-like TPH_RS10705 PF00171 Aldehyde dehydrogenase family TPH_RS10710 PF01472 PUA domain TPH_RS10710 PF00696 Amino acid kinase family TPH_RS10715 PF09269 Domain of unknown function (DUF1967) TPH_RS10715 PF01018 GTP1/OBG TPH_RS10715 PF01926 50S ribosome-binding GTPase TPH_RS10720 PF01016 Ribosomal L27 protein TPH_RS10730 PF00829 Ribosomal prokaryotic L21 protein TPH_RS10735 PF02954 Bacterial regulatory protein, Fis family TPH_RS10735 PF00158 Sigma-54 interaction domain TPH_RS10735 PF13426 PAS domain TPH_RS10750 PF00171 Aldehyde dehydrogenase family TPH_RS10760 PF01513 ATP-NAD kinase TPH_RS10770 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS10770 PF00037 4Fe-4S binding domain TPH_RS10770 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPH_RS10775 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPH_RS10775 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPH_RS10775 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TPH_RS10780 PF13411 MerR HTH family regulatory protein TPH_RS10795 PF00248 Aldo/keto reductase family TPH_RS10800 PF00465 Iron-containing alcohol dehydrogenase TPH_RS10850 PF07690 Major Facilitator Superfamily TPH_RS10870 PF00795 Carbon-nitrogen hydrolase TPH_RS10875 PF13005 zinc-finger binding domain of transposase IS66 TPH_RS10875 PF13007 Transposase C of IS166 homeodomain TPH_RS10875 PF03050 Transposase IS66 family TPH_RS10875 PF13817 IS66 C-terminal element TPH_RS10910 PF12728 Helix-turn-helix domain TPH_RS10915 PF14659 Phage integrase, N-terminal SAM-like domain TPH_RS10915 PF00589 Phage integrase family TPH_RS10960 PF00872 Transposase, Mutator family TPH_RS10980 PF00497 Bacterial extracellular solute-binding proteins, family 3 TPH_RS10985 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS10990 PF00005 ABC transporter TPH_RS11005 PF02561 Flagellar protein FliS TPH_RS11015 PF07195 Flagellar hook-associated protein 2 C-terminus TPH_RS11015 PF07196 Flagellin hook IN motif TPH_RS11015 PF02465 Flagellar hook-associated protein 2 N-terminus TPH_RS11025 PF07196 Flagellin hook IN motif TPH_RS11025 PF07195 Flagellar hook-associated protein 2 C-terminus TPH_RS11025 PF02465 Flagellar hook-associated protein 2 N-terminus TPH_RS11040 PF12544 Lysine-2,3-aminomutase TPH_RS11040 PF04055 Radical SAM superfamily TPH_RS11045 PF07685 CobB/CobQ-like glutamine amidotransferase domain TPH_RS11050 PF08353 Domain of unknown function (DUF1727) TPH_RS11050 PF08245 Mur ligase middle domain TPH_RS11055 PF16864 Dimerisation domain TPH_RS11055 PF00891 O-methyltransferase domain TPH_RS11060 PF01964 Radical SAM ThiC family TPH_RS11065 PF01964 Radical SAM ThiC family TPH_RS11070 PF14620 YpeB sporulation TPH_RS11075 PF01471 Putative peptidoglycan binding domain TPH_RS11075 PF07486 Cell Wall Hydrolase TPH_RS11080 PF01040 UbiA prenyltransferase family TPH_RS11085 PF16325 Peptidase family U32 C-terminal domain TPH_RS11085 PF01136 Peptidase family U32 TPH_RS11090 PF00202 Aminotransferase class-III TPH_RS11095 PF01261 Xylose isomerase-like TIM barrel TPH_RS11100 PF01979 Amidohydrolase family TPH_RS11105 PF02634 FdhD/NarQ family TPH_RS11125 PF00950 ABC 3 transport family TPH_RS11130 PF00005 ABC transporter TPH_RS11135 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment TPH_RS11135 PF01297 Zinc-uptake complex component A periplasmic TPH_RS11140 PF01475 Ferric uptake regulator family TPH_RS11150 PF04474 Protein of unknown function (DUF554) TPH_RS11155 PF00011 Hsp20/alpha crystallin family TPH_RS11160 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain TPH_RS11160 PF17203 Single cache domain 3 TPH_RS11160 PF00989 PAS fold TPH_RS11160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS11185 PF01883 Iron-sulfur cluster assembly protein TPH_RS11185 PF10609 NUBPL iron-transfer P-loop NTPase TPH_RS11205 PF10609 NUBPL iron-transfer P-loop NTPase TPH_RS11225 PF00753 Metallo-beta-lactamase superfamily TPH_RS11225 PF16123 Hydroxyacylglutathione hydrolase C-terminus TPH_RS11235 PF01018 GTP1/OBG TPH_RS11235 PF04055 Radical SAM superfamily TPH_RS11235 PF01926 50S ribosome-binding GTPase TPH_RS11240 PF03180 NLPA lipoprotein TPH_RS11245 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS11250 PF00005 ABC transporter TPH_RS11250 PF09383 NIL domain TPH_RS11255 PF04101 Glycosyltransferase family 28 C-terminal domain TPH_RS11255 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase TPH_RS11260 PF00395 S-layer homology domain TPH_RS11260 PF00963 Cohesin domain TPH_RS11265 PF01750 Hydrogenase maturation protease TPH_RS11270 PF01791 DeoC/LacD family aldolase TPH_RS11275 PF07650 KH domain TPH_RS11275 PF01926 50S ribosome-binding GTPase TPH_RS11280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TPH_RS11285 PF01219 Prokaryotic diacylglycerol kinase TPH_RS11290 PF02130 Uncharacterized protein family UPF0054 TPH_RS11295 PF07697 7TM-HD extracellular TPH_RS11295 PF01966 HD domain TPH_RS11295 PF07698 7TM receptor with intracellular HD hydrolase TPH_RS11300 PF02562 PhoH-like protein TPH_RS11310 PF07873 YabP family TPH_RS11315 PF09424 Yqey-like protein TPH_RS11320 PF01165 Ribosomal protein S21 TPH_RS11345 PF12627 Probable RNA and SrmB- binding site of polymerase A TPH_RS11345 PF01743 Poly A polymerase head domain TPH_RS11345 PF01966 HD domain TPH_RS11355 PF03772 Competence protein TPH_RS11355 PF13567 Domain of unknown function (DUF4131) TPH_RS11355 PF00753 Metallo-beta-lactamase superfamily TPH_RS11415 PF13408 Recombinase zinc beta ribbon domain TPH_RS11415 PF07508 Recombinase TPH_RS11425 PF02796 Helix-turn-helix domain of resolvase TPH_RS11425 PF00239 Resolvase, N terminal domain TPH_RS11435 PF01510 N-acetylmuramoyl-L-alanine amidase TPH_RS11435 PF01476 LysM domain TPH_RS11435 PF01471 Putative peptidoglycan binding domain TPH_RS11440 PF05105 Bacteriophage holin family TPH_RS11445 PF01522 Polysaccharide deacetylase TPH_RS11505 PF00574 Clp protease TPH_RS11510 PF04860 Phage portal protein TPH_RS11520 PF03354 Phage Terminase TPH_RS11555 PF01555 DNA methylase TPH_RS11560 PF01555 DNA methylase TPH_RS11595 PF00665 Integrase core domain TPH_RS11600 PF02796 Helix-turn-helix domain of resolvase TPH_RS11600 PF00665 Integrase core domain TPH_RS11605 PF01695 IstB-like ATP binding protein TPH_RS11620 PF02915 Rubrerythrin TPH_RS11625 PF00301 Rubredoxin TPH_RS11635 PF10609 NUBPL iron-transfer P-loop NTPase TPH_RS11660 PF01592 NifU-like N terminal domain TPH_RS11665 PF02001 Protein of unknown function DUF134 TPH_RS11675 PF05958 tRNA (Uracil-5-)-methyltransferase TPH_RS11675 PF01938 TRAM domain TPH_RS11675 PF02475 Met-10+ like-protein TPH_RS11700 PF00005 ABC transporter TPH_RS11700 PF08402 TOBE domain TPH_RS11715 PF00005 ABC transporter TPH_RS11715 PF02687 FtsX-like permease family TPH_RS11715 PF12704 MacB-like periplasmic core domain TPH_RS11720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TPH_RS11725 PF00005 ABC transporter TPH_RS11740 PF00072 Response regulator receiver domain TPH_RS11740 PF00486 Transcriptional regulatory protein, C terminal TPH_RS11745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS11745 PF00512 His Kinase A (phospho-acceptor) domain TPH_RS11745 PF00672 HAMP domain TPH_RS11760 PF00005 ABC transporter TPH_RS11805 PF13458 Periplasmic binding protein TPH_RS11810 PF02653 Branched-chain amino acid transport system / permease component TPH_RS11815 PF11862 Domain of unknown function (DUF3382) TPH_RS11815 PF02653 Branched-chain amino acid transport system / permease component TPH_RS11820 PF00005 ABC transporter TPH_RS11820 PF12399 Branched-chain amino acid ATP-binding cassette transporter TPH_RS11825 PF01139 tRNA-splicing ligase RtcB TPH_RS11840 PF00501 AMP-binding enzyme TPH_RS11840 PF14535 AMP-binding enzyme C-terminal domain TPH_RS11860 PF01070 FMN-dependent dehydrogenase TPH_RS11885 PF02441 Flavoprotein TPH_RS11890 PF00892 EamA-like transporter family TPH_RS11895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TPH_RS11905 PF03480 Bacterial extracellular solute-binding protein, family 7 TPH_RS11910 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TPH_RS11915 PF01180 Dihydroorotate dehydrogenase TPH_RS11920 PF00392 Bacterial regulatory proteins, gntR family TPH_RS11920 PF07729 FCD domain TPH_RS11935 PF03737 Aldolase/RraA TPH_RS11935 PF00180 Isocitrate/isopropylmalate dehydrogenase TPH_RS11940 PF03737 Aldolase/RraA TPH_RS11945 PF00180 Isocitrate/isopropylmalate dehydrogenase TPH_RS11945 PF03737 Aldolase/RraA TPH_RS11950 PF02910 Fumarate reductase flavoprotein C-term TPH_RS11950 PF00890 FAD binding domain TPH_RS11955 PF01180 Dihydroorotate dehydrogenase TPH_RS11960 PF07827 KNTase C-terminal domain TPH_RS11975 PF06018 CodY GAF-like domain TPH_RS11975 PF17853 GGDEF-like domain TPH_RS11975 PF13556 PucR C-terminal helix-turn-helix domain TPH_RS11980 PF04205 FMN-binding domain TPH_RS11980 PF00890 FAD binding domain TPH_RS11980 PF03358 NADPH-dependent FMN reductase TPH_RS11985 PF04070 Domain of unknown function (DUF378) TPH_RS11995 PF01695 IstB-like ATP binding protein TPH_RS12000 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TPH_RS12040 PF01548 Transposase TPH_RS12040 PF02371 Transposase IS116/IS110/IS902 family TPH_RS12050 PF02371 Transposase IS116/IS110/IS902 family TPH_RS12050 PF01548 Transposase TPH_RS12055 PF13007 Transposase C of IS166 homeodomain TPH_RS12055 PF13005 zinc-finger binding domain of transposase IS66 TPH_RS12055 PF03050 Transposase IS66 family TPH_RS12055 PF13817 IS66 C-terminal element TPH_RS12085 PF09827 CRISPR associated protein Cas2 TPH_RS12090 PF01867 CRISPR associated protein Cas1 TPH_RS12140 PF03787 RAMP superfamily TPH_RS12150 PF03787 RAMP superfamily TPH_RS12165 PF03787 RAMP superfamily TPH_RS12195 PF03313 Serine dehydratase alpha chain TPH_RS12210 PF00075 RNase H TPH_RS12215 PF00704 Glycosyl hydrolases family 18 TPH_RS12215 PF01476 LysM domain TPH_RS12230 PF04239 Protein of unknown function (DUF421) TPH_RS12245 PF00860 Permease family TPH_RS12280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TPH_RS12280 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TPH_RS12280 PF02142 MGS-like domain TPH_RS12295 PF00440 Bacterial regulatory proteins, tetR family TPH_RS12305 PF00005 ABC transporter TPH_RS12310 PF00005 ABC transporter TPH_RS12315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TPH_RS12335 PF00313 'Cold-shock' DNA-binding domain TPH_RS12375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPH_RS12380 PF01613 Flavin reductase like domain TPH_RS12390 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS12390 PF12911 N-terminal TM domain of oligopeptide transport permease C TPH_RS12395 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS12400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPH_RS12405 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS12410 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS12425 PF07690 Major Facilitator Superfamily TPH_RS12430 PF13186 Iron-sulfur cluster-binding domain TPH_RS12430 PF04055 Radical SAM superfamily TPH_RS12435 PF05958 tRNA (Uracil-5-)-methyltransferase TPH_RS12440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPH_RS12460 PF00005 ABC transporter TPH_RS12460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPH_RS12465 PF00005 ABC transporter TPH_RS12465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPH_RS12485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPH_RS12490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPH_RS12490 PF00005 ABC transporter TPH_RS12500 PF00005 ABC transporter TPH_RS12510 PF04055 Radical SAM superfamily TPH_RS12510 PF06463 Molybdenum Cofactor Synthesis C TPH_RS12525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPH_RS12535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPH_RS12535 PF00005 ABC transporter TPH_RS12540 PF00005 ABC transporter TPH_RS12540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPH_RS12545 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS12545 PF12911 N-terminal TM domain of oligopeptide transport permease C TPH_RS12555 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS12555 PF12911 N-terminal TM domain of oligopeptide transport permease C TPH_RS12560 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS12580 PF13307 Helicase C-terminal domain TPH_RS12580 PF04851 Type III restriction enzyme, res subunit TPH_RS12600 PF00069 Protein kinase domain TPH_RS12600 PF03793 PASTA domain TPH_RS12605 PF14698 Argininosuccinate lyase C-terminal TPH_RS12605 PF00206 Lyase TPH_RS12610 PF00764 Arginosuccinate synthase TPH_RS12615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TPH_RS12615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TPH_RS12620 PF00202 Aminotransferase class-III TPH_RS12625 PF00696 Amino acid kinase family TPH_RS12630 PF01960 ArgJ family TPH_RS12635 PF02774 Semialdehyde dehydrogenase, dimerisation domain TPH_RS12635 PF01118 Semialdehyde dehydrogenase, NAD binding domain TPH_RS12645 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase TPH_RS12645 PF01871 AMMECR1 TPH_RS12655 PF01520 N-acetylmuramoyl-L-alanine amidase TPH_RS12660 PF00380 Ribosomal protein S9/S16 TPH_RS12665 PF00572 Ribosomal protein L13 TPH_RS12670 PF01416 tRNA pseudouridine synthase TPH_RS12675 PF01196 Ribosomal protein L17 TPH_RS12680 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TPH_RS12680 PF01000 RNA polymerase Rpb3/RpoA insert domain TPH_RS12680 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TPH_RS12685 PF00163 Ribosomal protein S4/S9 N-terminal domain TPH_RS12685 PF01479 S4 domain TPH_RS12690 PF00411 Ribosomal protein S11 TPH_RS12695 PF00416 Ribosomal protein S13/S18 TPH_RS12700 PF00444 Ribosomal protein L36 TPH_RS12705 PF01176 Translation initiation factor 1A / IF-1 TPH_RS12715 PF00557 Metallopeptidase family M24 TPH_RS12720 PF05191 Adenylate kinase, active site lid TPH_RS12725 PF00344 SecY translocase TPH_RS12730 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TPH_RS12735 PF03719 Ribosomal protein S5, C-terminal domain TPH_RS12735 PF00333 Ribosomal protein S5, N-terminal domain TPH_RS12740 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TPH_RS12745 PF00347 Ribosomal protein L6 TPH_RS12750 PF00410 Ribosomal protein S8 TPH_RS12755 PF00253 Ribosomal protein S14p/S29e TPH_RS12760 PF00281 Ribosomal protein L5 TPH_RS12760 PF00673 ribosomal L5P family C-terminus TPH_RS12765 PF00467 KOW motif TPH_RS12765 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TPH_RS12770 PF00238 Ribosomal protein L14p/L23e TPH_RS12775 PF00366 Ribosomal protein S17 TPH_RS12780 PF00831 Ribosomal L29 protein TPH_RS12785 PF00252 Ribosomal protein L16p/L10e TPH_RS12790 PF07650 KH domain TPH_RS12790 PF00189 Ribosomal protein S3, C-terminal domain TPH_RS12795 PF00237 Ribosomal protein L22p/L17e TPH_RS12800 PF00203 Ribosomal protein S19 TPH_RS12805 PF00181 Ribosomal Proteins L2, RNA binding domain TPH_RS12805 PF03947 Ribosomal Proteins L2, C-terminal domain TPH_RS12810 PF00276 Ribosomal protein L23 TPH_RS12815 PF00573 Ribosomal protein L4/L1 family TPH_RS12820 PF00297 Ribosomal protein L3 TPH_RS12825 PF00338 Ribosomal protein S10p/S20e TPH_RS12830 PF00009 Elongation factor Tu GTP binding domain TPH_RS12830 PF03144 Elongation factor Tu domain 2 TPH_RS12830 PF03143 Elongation factor Tu C-terminal domain TPH_RS12835 PF00679 Elongation factor G C-terminus TPH_RS12835 PF03764 Elongation factor G, domain IV TPH_RS12835 PF14492 Elongation Factor G, domain II TPH_RS12835 PF03144 Elongation factor Tu domain 2 TPH_RS12835 PF00009 Elongation factor Tu GTP binding domain TPH_RS12840 PF00177 Ribosomal protein S7p/S5e TPH_RS12845 PF00164 Ribosomal protein S12/S23 TPH_RS12850 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TPH_RS12855 PF05000 RNA polymerase Rpb1, domain 4 TPH_RS12855 PF04983 RNA polymerase Rpb1, domain 3 TPH_RS12855 PF04997 RNA polymerase Rpb1, domain 1 TPH_RS12855 PF04998 RNA polymerase Rpb1, domain 5 TPH_RS12855 PF00623 RNA polymerase Rpb1, domain 2 TPH_RS12860 PF04563 RNA polymerase beta subunit TPH_RS12860 PF04561 RNA polymerase Rpb2, domain 2 TPH_RS12860 PF04565 RNA polymerase Rpb2, domain 3 TPH_RS12860 PF10385 RNA polymerase beta subunit external 1 domain TPH_RS12860 PF00562 RNA polymerase Rpb2, domain 6 TPH_RS12860 PF04560 RNA polymerase Rpb2, domain 7 TPH_RS12880 PF07556 Protein of unknown function (DUF1538) TPH_RS12895 PF06782 Uncharacterised protein family (UPF0236) TPH_RS12910 PF00542 Ribosomal protein L7/L12 C-terminal domain TPH_RS12910 PF16320 Ribosomal protein L7/L12 dimerisation domain TPH_RS12915 PF00466 Ribosomal protein L10 TPH_RS12920 PF00687 Ribosomal protein L1p/L10e family TPH_RS12925 PF03946 Ribosomal protein L11, N-terminal domain TPH_RS12925 PF00298 Ribosomal protein L11, RNA binding domain TPH_RS12930 PF00467 KOW motif TPH_RS12930 PF02357 Transcription termination factor nusG TPH_RS12940 PF00471 Ribosomal protein L33 TPH_RS12985 PF01336 OB-fold nucleic acid binding domain TPH_RS12985 PF00152 tRNA synthetases class II (D, K and N) TPH_RS12990 PF03449 Transcription elongation factor, N-terminal TPH_RS12990 PF01272 Transcription elongation factor, GreA/GreB, C-term TPH_RS12995 PF00202 Aminotransferase class-III TPH_RS13020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS13020 PF00384 Molybdopterin oxidoreductase TPH_RS13020 PF01568 Molydopterin dinucleotide binding domain TPH_RS13025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS13025 PF00384 Molybdopterin oxidoreductase TPH_RS13025 PF01568 Molydopterin dinucleotide binding domain TPH_RS13030 PF12798 4Fe-4S binding domain TPH_RS13030 PF00037 4Fe-4S binding domain TPH_RS13035 PF00361 Proton-conducting membrane transporter TPH_RS13040 PF00146 NADH dehydrogenase TPH_RS13045 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TPH_RS13050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TPH_RS13050 PF00361 Proton-conducting membrane transporter TPH_RS13060 PF00374 Nickel-dependent hydrogenase TPH_RS13060 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TPH_RS13060 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TPH_RS13065 PF12838 4Fe-4S dicluster domain TPH_RS13070 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TPH_RS13075 PF07450 Formate hydrogenlyase maturation protein HycH TPH_RS13080 PF01750 Hydrogenase maturation protease TPH_RS13085 PF00300 Histidine phosphatase superfamily (branch 1) TPH_RS13090 PF12728 Helix-turn-helix domain TPH_RS13090 PF12727 PBP superfamily domain TPH_RS13105 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS13110 PF00005 ABC transporter TPH_RS13110 PF08402 TOBE domain TPH_RS13120 PF02446 4-alpha-glucanotransferase TPH_RS13125 PF00534 Glycosyl transferases group 1 TPH_RS13130 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TPH_RS13130 PF00128 Alpha amylase, catalytic domain TPH_RS13140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TPH_RS13140 PF00128 Alpha amylase, catalytic domain TPH_RS13140 PF11941 Domain of unknown function (DUF3459) TPH_RS13145 PF00290 Tryptophan synthase alpha chain TPH_RS13150 PF00291 Pyridoxal-phosphate dependent enzyme TPH_RS13155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TPH_RS13160 PF00218 Indole-3-glycerol phosphate synthase TPH_RS13165 PF00117 Glutamine amidotransferase class-I TPH_RS13165 PF02885 Glycosyl transferase family, helical bundle domain TPH_RS13165 PF00591 Glycosyl transferase family, a/b domain TPH_RS13170 PF00425 chorismate binding enzyme TPH_RS13170 PF04715 Anthranilate synthase component I, N terminal region TPH_RS13175 PF18152 DAHP synthase ferredoxin-like domain TPH_RS13175 PF00793 DAHP synthetase I family TPH_RS13180 PF09335 SNARE associated Golgi protein TPH_RS13190 PF01207 Dihydrouridine synthase (Dus) TPH_RS13195 PF03309 Type III pantothenate kinase TPH_RS13200 PF03099 Biotin/lipoate A/B protein ligase family TPH_RS13200 PF02237 Biotin protein ligase C terminal domain TPH_RS13200 PF08279 HTH domain TPH_RS13205 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TPH_RS13205 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TPH_RS13210 PF00890 FAD binding domain TPH_RS13210 PF02910 Fumarate reductase flavoprotein C-term TPH_RS13215 PF02445 Quinolinate synthetase A protein TPH_RS13220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TPH_RS13220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TPH_RS13235 PF03030 Inorganic H+ pyrophosphatase TPH_RS13250 PF18152 DAHP synthase ferredoxin-like domain TPH_RS13250 PF00793 DAHP synthetase I family TPH_RS13255 PF01842 ACT domain TPH_RS13255 PF01817 Chorismate mutase type II TPH_RS13255 PF00800 Prephenate dehydratase TPH_RS13260 PF02261 Aspartate decarboxylase TPH_RS13265 PF02569 Pantoate-beta-alanine ligase TPH_RS13270 PF02548 Ketopantoate hydroxymethyltransferase TPH_RS13280 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TPH_RS13285 PF02152 Dihydroneopterin aldolase TPH_RS13290 PF00809 Pterin binding enzyme TPH_RS13295 PF01966 HD domain TPH_RS13300 PF01268 Formate--tetrahydrofolate ligase TPH_RS13305 PF00334 Nucleoside diphosphate kinase TPH_RS13310 PF06480 FtsH Extracellular TPH_RS13310 PF17862 AAA+ lid domain TPH_RS13310 PF00004 ATPase family associated with various cellular activities (AAA) TPH_RS13310 PF01434 Peptidase family M41 TPH_RS13315 PF11734 TilS substrate C-terminal domain TPH_RS13315 PF01171 PP-loop family TPH_RS13340 PF00704 Glycosyl hydrolases family 18 TPH_RS13340 PF01476 LysM domain TPH_RS13345 PF02492 CobW/HypB/UreG, nucleotide-binding domain TPH_RS13350 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TPH_RS13360 PF00374 Nickel-dependent hydrogenase TPH_RS13365 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TPH_RS13370 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TPH_RS13370 PF00175 Oxidoreductase NAD-binding domain TPH_RS13380 PF02541 Ppx/GppA phosphatase family TPH_RS13385 PF04977 Septum formation initiator TPH_RS13405 PF00291 Pyridoxal-phosphate dependent enzyme TPH_RS13410 PF00291 Pyridoxal-phosphate dependent enzyme TPH_RS13415 PF00464 Serine hydroxymethyltransferase TPH_RS13420 PF07969 Amidohydrolase family TPH_RS13425 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin TPH_RS13430 PF01979 Amidohydrolase family TPH_RS13435 PF01546 Peptidase family M20/M25/M40 TPH_RS13435 PF07687 Peptidase dimerisation domain TPH_RS13440 PF13188 PAS domain TPH_RS13440 PF02954 Bacterial regulatory protein, Fis family TPH_RS13440 PF00158 Sigma-54 interaction domain TPH_RS13445 PF03313 Serine dehydratase alpha chain TPH_RS13455 PF00872 Transposase, Mutator family TPH_RS13465 PF00460 Flagella basal body rod protein TPH_RS13465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPH_RS13470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPH_RS13470 PF00460 Flagella basal body rod protein TPH_RS13480 PF12116 Stage III sporulation protein D TPH_RS13490 PF07875 Coat F domain TPH_RS13495 PF08486 Stage II sporulation protein TPH_RS13505 PF00392 Bacterial regulatory proteins, gntR family TPH_RS13510 PF01325 Iron dependent repressor, N-terminal DNA binding domain TPH_RS13510 PF02742 Iron dependent repressor, metal binding and dimerisation domain TPH_RS13530 PF07690 Major Facilitator Superfamily TPH_RS13535 PF00384 Molybdopterin oxidoreductase TPH_RS13535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS13535 PF12838 4Fe-4S dicluster domain TPH_RS13535 PF01568 Molydopterin dinucleotide binding domain TPH_RS13535 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TPH_RS13540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TPH_RS13540 PF01568 Molydopterin dinucleotide binding domain TPH_RS13540 PF00384 Molybdopterin oxidoreductase TPH_RS13550 PF00994 Probable molybdopterin binding domain TPH_RS13550 PF03454 MoeA C-terminal region (domain IV) TPH_RS13550 PF03453 MoeA N-terminal region (domain I and II) TPH_RS13560 PF00005 ABC transporter TPH_RS13560 PF09383 NIL domain TPH_RS13565 PF00528 Binding-protein-dependent transport system inner membrane component TPH_RS13570 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TPH_RS13570 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TPH_RS13575 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPH_RS13575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPH_RS13580 PF00231 ATP synthase TPH_RS13585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPH_RS13585 PF00306 ATP synthase alpha/beta chain, C terminal domain TPH_RS13585 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPH_RS13590 PF00213 ATP synthase delta (OSCP) subunit TPH_RS13595 PF00430 ATP synthase B/B' CF(0) TPH_RS13600 PF00137 ATP synthase subunit C TPH_RS13605 PF00119 ATP synthase A chain TPH_RS13620 PF02350 UDP-N-acetylglucosamine 2-epimerase TPH_RS13635 PF00464 Serine hydroxymethyltransferase TPH_RS13640 PF02502 Ribose/Galactose Isomerase TPH_RS13645 PF01451 Low molecular weight phosphotyrosine protein phosphatase TPH_RS13650 PF02659 Putative manganese efflux pump TPH_RS13655 PF01300 Telomere recombination TPH_RS13655 PF03481 Putative GTP-binding controlling metal-binding TPH_RS13665 PF17827 PrmC N-terminal domain TPH_RS13665 PF05175 Methyltransferase small domain TPH_RS13670 PF00472 RF-1 domain TPH_RS13670 PF03462 PCRF domain TPH_RS13675 PF07136 Protein of unknown function (DUF1385) TPH_RS13680 PF01197 Ribosomal protein L31 TPH_RS13685 PF02080 TrkA-C domain TPH_RS13685 PF06826 Predicted Permease Membrane Region TPH_RS13690 PF00809 Pterin binding enzyme TPH_RS13695 PF03949 Malic enzyme, NAD binding domain TPH_RS13695 PF00390 Malic enzyme, N-terminal domain TPH_RS13700 PF09861 Lactate racemase N-terminal domain TPH_RS13715 PF02028 BCCT, betaine/carnitine/choline family transporter TPH_RS13725 PF02607 B12 binding domain TPH_RS13725 PF02310 B12 binding domain TPH_RS13730 PF06253 Trimethylamine methyltransferase (MTTB) TPH_RS13735 PF06253 Trimethylamine methyltransferase (MTTB) TPH_RS13740 PF02607 B12 binding domain TPH_RS13740 PF02310 B12 binding domain TPH_RS13755 PF00202 Aminotransferase class-III TPH_RS13760 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch TPH_RS13765 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TPH_RS13765 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TPH_RS13770 PF02607 B12 binding domain TPH_RS13770 PF02310 B12 binding domain TPH_RS13780 PF00158 Sigma-54 interaction domain TPH_RS13780 PF02954 Bacterial regulatory protein, Fis family TPH_RS13780 PF01590 GAF domain TPH_RS13785 PF02233 NAD(P) transhydrogenase beta subunit TPH_RS13790 PF01476 LysM domain TPH_RS13790 PF08525 Opacity-associated protein A N-terminal motif TPH_RS13790 PF01551 Peptidase family M23 TPH_RS13795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPH_RS13795 PF07497 Rho termination factor, RNA-binding domain TPH_RS13795 PF07498 Rho termination factor, N-terminal domain TPH_RS13800 PF00923 Transaldolase/Fructose-6-phosphate aldolase TPH_RS13805 PF01116 Fructose-bisphosphate aldolase class-II TPH_RS13815 PF00842 Alanine racemase, C-terminal domain TPH_RS13815 PF01168 Alanine racemase, N-terminal domain TPH_RS13825 PF06418 CTP synthase N-terminus TPH_RS13825 PF00117 Glutamine amidotransferase class-I TPH_RS13835 PF00750 tRNA synthetases class I (R) TPH_RS13835 PF05746 DALR anticodon binding domain TPH_RS13835 PF03485 Arginyl tRNA synthetase N terminal domain TPH_RS13840 PF13188 PAS domain TPH_RS13840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPH_RS13840 PF00989 PAS fold TPH_RS13840 PF13426 PAS domain TPH_RS13840 PF00512 His Kinase A (phospho-acceptor) domain TPH_RS13860 PF06745 KaiC TPH_RS13870 PF02492 CobW/HypB/UreG, nucleotide-binding domain TPH_RS13870 PF07683 Cobalamin synthesis protein cobW C-terminal domain TPH_RS13880 PF02310 B12 binding domain TPH_RS13880 PF02607 B12 binding domain TPH_RS13885 PF00392 Bacterial regulatory proteins, gntR family TPH_RS13885 PF07702 UTRA domain TPH_RS13890 PF01208 Uroporphyrinogen decarboxylase (URO-D) TPH_RS13895 PF02310 B12 binding domain TPH_RS13895 PF02607 B12 binding domain TPH_RS13900 PF00395 S-layer homology domain TPH_RS13900 PF00963 Cohesin domain TPH_RS13905 PF02590 Predicted SPOUT methyltransferase TPH_RS13920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TPH_RS13935 PF08525 Opacity-associated protein A N-terminal motif TPH_RS13935 PF01476 LysM domain TPH_RS13935 PF01551 Peptidase family M23 TPH_RS13950 PF08281 Sigma-70, region 4 TPH_RS13950 PF04542 Sigma-70 region 2 TPH_RS13960 PF00395 S-layer homology domain TPH_RS13960 PF00963 Cohesin domain TPH_RS13965 PF03808 Glycosyl transferase WecB/TagA/CpsF family TPH_RS13975 PF00150 Cellulase (glycosyl hydrolase family 5) TPH_RS13975 PF00395 S-layer homology domain TPH_RS13975 PF03424 Carbohydrate binding domain (family 17/28) TPH_RS13980 PF08486 Stage II sporulation protein TPH_RS13985 PF01479 S4 domain TPH_RS13990 PF00216 Bacterial DNA-binding protein TPH_RS13995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPH_RS13995 PF03819 MazG nucleotide pyrophosphohydrolase domain TPH_RS14000 PF14667 Polysaccharide biosynthesis C-terminal domain TPH_RS14000 PF01943 Polysaccharide biosynthesis protein TPH_RS14005 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TPH_RS14005 PF15714 Stage V sporulation protein T C-terminal, transcription factor TPH_RS14010 PF00639 PPIC-type PPIASE domain TPH_RS14015 PF03461 TRCF domain TPH_RS14015 PF00271 Helicase conserved C-terminal domain TPH_RS14015 PF17757 UvrB interaction domain TPH_RS14015 PF00270 DEAD/DEAH box helicase TPH_RS14015 PF02559 CarD-like/TRCF domain TPH_RS14025 PF01195 Peptidyl-tRNA hydrolase TPH_RS14030 PF14693 Ribosomal protein TL5, C-terminal domain TPH_RS14030 PF01386 Ribosomal L25p family TPH_RS14040 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TPH_RS14040 PF14572 Phosphoribosyl synthetase-associated domain TPH_RS14045 PF12804 MobA-like NTP transferase domain TPH_RS14045 PF00132 Bacterial transferase hexapeptide (six repeats) TPH_RS14050 PF04026 SpoVG TPH_RS14055 PF12804 MobA-like NTP transferase domain TPH_RS14060 PF00392 Bacterial regulatory proteins, gntR family TPH_RS14060 PF07729 FCD domain TPH_RS14065 PF08544 GHMP kinases C terminal TPH_RS14065 PF00288 GHMP kinases N terminal domain TPH_RS14070 PF02875 Mur ligase family, glutamate ligase domain TPH_RS14070 PF08245 Mur ligase middle domain TPH_RS14070 PF08443 RimK-like ATP-grasp domain TPH_RS14075 PF03575 Peptidase family S51 TPH_RS14080 PF02535 ZIP Zinc transporter TPH_RS14085 PF09551 Stage II sporulation protein R (spore_II_R) TPH_RS14090 PF03734 L,D-transpeptidase catalytic domain TPH_RS14090 PF01476 LysM domain TPH_RS14095 PF00188 Cysteine-rich secretory protein family TPH_RS14110 PF02575 YbaB/EbfC DNA-binding family TPH_RS14125 PF01734 Patatin-like phospholipase TPH_RS14130 PF00089 Trypsin TPH_RS14130 PF02983 Alpha-lytic protease prodomain TPH_RS14160 PF00188 Cysteine-rich secretory protein family TPH_RS14170 PF06257 Biofilm formation stimulator VEG TPH_RS14180 PF05582 YabG peptidase U57 TPH_RS14195 PF04055 Radical SAM superfamily TPH_RS14210 PF04308 Ribonuclease H-like TPH_RS14215 PF00398 Ribosomal RNA adenine dimethylase TPH_RS14220 PF03990 G5-linked-Ubiquitin-like domain TPH_RS14220 PF07501 G5 domain TPH_RS14220 PF06725 3D domain TPH_RS14225 PF01476 LysM domain TPH_RS14225 PF06725 3D domain TPH_RS14230 PF01026 TatD related DNase TPH_RS14235 PF08264 Anticodon-binding domain of tRNA TPH_RS14235 PF01588 Putative tRNA binding domain TPH_RS14235 PF09334 tRNA synthetases class I (M) TPH_RS14240 PF06782 Uncharacterised protein family (UPF0236) TPH_RS14245 PF18277 AbrB C-terminal domain TPH_RS14245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin TPH_RS14250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPH_RS14255 PF04468 PSP1 C-terminal conserved region TPH_RS14260 PF09115 DNA polymerase III, delta subunit, C terminal TPH_RS14265 PF02223 Thymidylate kinase TPH_RS14270 PF01276 Orn/Lys/Arg decarboxylase, major domain TPH_RS14270 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TPH_RS14290 PF02386 Cation transport protein TPH_RS14295 PF02254 TrkA-N domain TPH_RS14295 PF02080 TrkA-C domain TPH_RS14320 PF10609 NUBPL iron-transfer P-loop NTPase TPH_RS14330 PF02254 TrkA-N domain TPH_RS14330 PF02080 TrkA-C domain TPH_RS14345 PF02386 Cation transport protein TPH_RS14360 PF13662 Toprim domain TPH_RS14360 PF02132 RecR protein TPH_RS14360 PF00633 Helix-hairpin-helix motif TPH_RS14365 PF02575 YbaB/EbfC DNA-binding family TPH_RS14370 PF12169 DNA polymerase III subunits gamma and tau domain III TPH_RS14385 PF02540 NAD synthase TPH_RS14390 PF00924 Mechanosensitive ion channel TPH_RS14400 PF14437 MafB19-like deaminase TPH_RS14405 PF01050 Mannose-6-phosphate isomerase TPH_RS14405 PF00483 Nucleotidyl transferase TPH_RS14410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TPH_RS14410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TPH_RS14410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TPH_RS14410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TPH_RS14420 PF00483 Nucleotidyl transferase TPH_RS14420 PF01050 Mannose-6-phosphate isomerase TPH_RS14435 PF03649 Uncharacterised protein family (UPF0014) TPH_RS14440 PF00005 ABC transporter TPH_RS14450 PF00027 Cyclic nucleotide-binding domain TPH_RS14450 PF13545 Crp-like helix-turn-helix domain