THETHE_RS00010	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS00010	SM00760	Bacterial dnaA protein helix-turn-helix domain
THETHE_RS00015	SM00480	DNA polymerase III beta subunit
THETHE_RS00020	SM00363	S4 RNA-binding domain
THETHE_RS00045	SM00387	Histidine kinase-like ATPases
THETHE_RS00045	SM00433	TopoisomeraseII
THETHE_RS00050	SM00434	DNA Topoisomerase IV
THETHE_RS00055	SM00900	THETHE_RS00055
THETHE_RS00090	SM01329	THETHE_RS00090
THETHE_RS00200	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THETHE_RS00200	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THETHE_RS00200	SM00091	PAS domain
THETHE_RS00200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS00200	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THETHE_RS00205	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS00215	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THETHE_RS00215	SM00493	THETHE_RS00215
THETHE_RS00240	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THETHE_RS00305	SM00363	S4 RNA-binding domain
THETHE_RS00315	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS00320	SM00849	Metallo-beta-lactamase superfamily
THETHE_RS00340	SM00986	Uracil DNA glycosylase superfamily
THETHE_RS00340	SM00987	UreE urease accessory protein, C-terminal domain 
THETHE_RS00435	SM00966	SpoVT / AbrB like domain 
THETHE_RS00490	SM01208	THETHE_RS00490
THETHE_RS00495	SM00650	Ribosomal RNA adenine dimethylases
THETHE_RS00530	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS00615	SM00487	DEAD-like helicases superfamily
THETHE_RS00615	SM00490	helicase superfamily c-terminal domain
THETHE_RS00625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
THETHE_RS00630	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS00645	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS00720	SM01130	THETHE_RS00720
THETHE_RS00725	SM01321	THETHE_RS00725
THETHE_RS00835	SM00354	helix_turn _helix lactose operon repressor
THETHE_RS00860	SM01400	THETHE_RS00860
THETHE_RS00865	SM00448	cheY-homologous receiver domain
THETHE_RS00865	SM00862	Transcriptional regulatory protein, C terminal
THETHE_RS00870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS00870	SM00387	Histidine kinase-like ATPases
THETHE_RS00870	SM00388	His Kinase A (phosphoacceptor) domain
THETHE_RS00875	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THETHE_RS00890	SM00487	DEAD-like helicases superfamily
THETHE_RS00890	SM00490	helicase superfamily c-terminal domain
THETHE_RS00890	SM00982	THETHE_RS00890
THETHE_RS00890	SM01058	CarD-like/TRCF domain
THETHE_RS00900	SM00966	SpoVT / AbrB like domain 
THETHE_RS00915	SM00257	Lysin motif
THETHE_RS00925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
THETHE_RS00925	SM00895	THETHE_RS00925
THETHE_RS00995	SM00354	helix_turn _helix lactose operon repressor
THETHE_RS01020	SM00836	DALR anticodon binding domain
THETHE_RS01020	SM01016	Arginyl tRNA synthetase N terminal dom
THETHE_RS01025	SM00534	ATPase domain of DNA mismatch repair MUTS family
THETHE_RS01080	SM00014	Acid phosphatase homologues
THETHE_RS01115	SM00487	DEAD-like helicases superfamily
THETHE_RS01115	SM00490	helicase superfamily c-terminal domain
THETHE_RS01155	SM00859	Semialdehyde dehydrogenase, NAD binding domain
THETHE_RS01175	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
THETHE_RS01180	SM00851	MGS-like domain
THETHE_RS01180	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
THETHE_RS01195	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
THETHE_RS01200	SM00450	Rhodanese Homology Domain
THETHE_RS01210	SM00529	Helix-turn-helix diphteria tox regulatory element
THETHE_RS01240	SM00028	Tetratricopeptide repeats
THETHE_RS01240	SM00530	Helix-turn-helix XRE-family like proteins 
THETHE_RS01250	SM00411	bacterial (prokaryotic) histone like domain
THETHE_RS01255	SM00363	S4 RNA-binding domain
THETHE_RS01275	SM00116	Domain in cystathionine beta-synthase and other proteins.
THETHE_RS01275	SM01131	THETHE_RS01275
THETHE_RS01290	SM00316	Ribosomal protein S1-like RNA-binding domain
THETHE_RS01325	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THETHE_RS01365	SM00646	THETHE_RS01365
THETHE_RS01390	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS01405	SM00890	Domain of unknown function
THETHE_RS01425	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS01490	SM00331	Sigma factor PP2C-like phosphatases
THETHE_RS01500	SM00220	Serine/Threonine protein kinases, catalytic domain
THETHE_RS01505	SM00977	TilS substrate C-terminal domain
THETHE_RS01515	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS01520	SM00342	helix_turn_helix, arabinose operon control protein
THETHE_RS01530	SM00091	PAS domain
THETHE_RS01530	SM00387	Histidine kinase-like ATPases
THETHE_RS01665	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THETHE_RS01665	SM00267	diguanylate cyclase
THETHE_RS01675	SM00838	Elongation factor G C-terminus
THETHE_RS01675	SM00889	Elongation factor G, domain IV
THETHE_RS01680	SM00919	Malic enzyme, NAD binding domain
THETHE_RS01680	SM01274	THETHE_RS01680
THETHE_RS01705	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS01705	SM01086	C-terminal, D2-small domain, of ClpB protein
THETHE_RS01710	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS01720	SM00670	Large family of predicted nucleotide-binding domains
THETHE_RS01760	SM00840	THETHE_RS01760
THETHE_RS01770	SM00967	RNA 2'-O ribose methyltransferase substrate binding
THETHE_RS01800	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
THETHE_RS01800	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
THETHE_RS01805	SM00649	Ribosomal protein L11/L12
THETHE_RS01830	SM00663	RNA polymerase I subunit A N-terminus
THETHE_RS01855	SM00838	Elongation factor G C-terminus
THETHE_RS01855	SM00889	Elongation factor G, domain IV
THETHE_RS01865	SM01403	THETHE_RS01865
THETHE_RS01885	SM01382	THETHE_RS01885
THETHE_RS01885	SM01383	THETHE_RS01885
THETHE_RS01900	SM00322	K homology RNA-binding domain
THETHE_RS01920	SM01374	THETHE_RS01920
THETHE_RS01925	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
THETHE_RS01990	SM00316	Ribosomal protein S1-like RNA-binding domain
THETHE_RS02010	SM00363	S4 RNA-binding domain
THETHE_RS02010	SM01390	THETHE_RS02010
THETHE_RS02015	SM00662	RNA polymerases D
THETHE_RS02025	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS02030	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS02110	SM00354	helix_turn _helix lactose operon repressor
THETHE_RS02135	SM00640	Glycosyl hydrolases family 32
THETHE_RS02200	SM00420	helix_turn_helix, Deoxyribose operon repressor
THETHE_RS02200	SM01134	THETHE_RS02200
THETHE_RS02255	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS02305	SM00257	Lysin motif
THETHE_RS02310	SM00646	THETHE_RS02310
THETHE_RS02315	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS02325	SM00460	Transglutaminase/protease-like homologues
THETHE_RS02370	SM00563	Phosphate acyltransferases
THETHE_RS02390	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
THETHE_RS02410	SM00487	DEAD-like helicases superfamily
THETHE_RS02410	SM00490	helicase superfamily c-terminal domain
THETHE_RS02495	SM00257	Lysin motif
THETHE_RS02525	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS02545	SM01005	Alanine racemase, C-terminal domain
THETHE_RS02645	SM01068	Putative carbohydrate binding domain
THETHE_RS02650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
THETHE_RS02665	SM00244	prohibitin homologues
THETHE_RS02770	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
THETHE_RS02785	SM01207	THETHE_RS02785
THETHE_RS02790	SM00226	Low molecular weight phosphatase family
THETHE_RS02795	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
THETHE_RS02830	SM00091	PAS domain
THETHE_RS02830	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS02840	SM01120	THETHE_RS02840
THETHE_RS02850	SM00849	Metallo-beta-lactamase superfamily
THETHE_RS02880	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS02890	SM00842	Cell division protein FtsA
THETHE_RS02915	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS02945	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS02980	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS02995	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THETHE_RS02995	SM00245	tail specific protease
THETHE_RS03000	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THETHE_RS03010	SM00487	DEAD-like helicases superfamily
THETHE_RS03010	SM00490	helicase superfamily c-terminal domain
THETHE_RS03015	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS03020	SM00240	Forkhead associated domain
THETHE_RS03035	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THETHE_RS03035	SM00465	GIY-YIG type nucleases (URI domain)
THETHE_RS03040	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS03050	SM00062	Bacterial periplasmic substrate-binding proteins
THETHE_RS03060	SM01061	CAT RNA binding domain
THETHE_RS03080	SM00481	DNA polymerase alpha chain like domain
THETHE_RS03095	SM00354	helix_turn _helix lactose operon repressor
THETHE_RS03125	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS03160	SM00813	Alpha-L-arabinofuranosidase C-terminus
THETHE_RS03180	SM00813	Alpha-L-arabinofuranosidase C-terminus
THETHE_RS03205	SM01007	Class II Aldolase and Adducin N-terminal domain
THETHE_RS03215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
THETHE_RS03235	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
THETHE_RS03260	SM00419	helix_turn_helix, cAMP Regulatory protein
THETHE_RS03265	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THETHE_RS03270	SM00448	cheY-homologous receiver domain
THETHE_RS03315	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
THETHE_RS03415	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THETHE_RS03415	SM00481	DNA polymerase alpha chain like domain
THETHE_RS03415	SM00483	DNA polymerase X family
THETHE_RS03425	SM00746	metallochaperone-like domain
THETHE_RS03470	SM00746	metallochaperone-like domain
THETHE_RS03495	SM00387	Histidine kinase-like ATPases
THETHE_RS03495	SM00388	His Kinase A (phosphoacceptor) domain
THETHE_RS03500	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS03500	SM00448	cheY-homologous receiver domain
THETHE_RS03525	SM00481	DNA polymerase alpha chain like domain
THETHE_RS03585	SM00642	Alpha-amylase domain
THETHE_RS03605	SM00116	Domain in cystathionine beta-synthase and other proteins.
THETHE_RS03610	SM00481	DNA polymerase alpha chain like domain
THETHE_RS03690	SM00966	SpoVT / AbrB like domain 
THETHE_RS03695	SM00670	Large family of predicted nucleotide-binding domains
THETHE_RS03750	SM00488	THETHE_RS03750
THETHE_RS03750	SM00491	THETHE_RS03750
THETHE_RS03770	SM00363	S4 RNA-binding domain
THETHE_RS03770	SM01390	THETHE_RS03770
THETHE_RS03810	SM00900	THETHE_RS03810
THETHE_RS03845	SM01018	B12 binding domain
THETHE_RS03890	SM00448	cheY-homologous receiver domain
THETHE_RS03895	SM00387	Histidine kinase-like ATPases
THETHE_RS03985	SM00422	helix_turn_helix, mercury resistance
THETHE_RS04005	SM00518	AP endonuclease family 2
THETHE_RS04025	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS04025	SM00994	ClpX C4-type zinc finger
THETHE_RS04025	SM01086	C-terminal, D2-small domain, of ClpB protein
THETHE_RS04035	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS04035	SM00464	Found in ATP-dependent protease La (LON)
THETHE_RS04075	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS04105	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS04115	SM00028	Tetratricopeptide repeats
THETHE_RS04210	SM00984	UDP binding domain
THETHE_RS04230	SM00487	DEAD-like helicases superfamily
THETHE_RS04230	SM00490	helicase superfamily c-terminal domain
THETHE_RS04250	SM00028	Tetratricopeptide repeats
THETHE_RS04330	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS04395	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS04405	SM01217	THETHE_RS04405
THETHE_RS04415	SM00530	Helix-turn-helix XRE-family like proteins 
THETHE_RS04505	SM00345	helix_turn_helix gluconate operon transcriptional repressor
THETHE_RS04505	SM00895	THETHE_RS04505
THETHE_RS04530	SM00633	Glycosyl hydrolase family 10
THETHE_RS04565	SM00342	helix_turn_helix, arabinose operon control protein
THETHE_RS04565	SM00448	cheY-homologous receiver domain
THETHE_RS04570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS04570	SM00387	Histidine kinase-like ATPases
THETHE_RS04635	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS04680	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
THETHE_RS04680	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
THETHE_RS04735	SM00831	Cation transporter/ATPase, N-terminus
THETHE_RS04745	SM00562	THETHE_RS04745
THETHE_RS04765	SM00849	Metallo-beta-lactamase superfamily
THETHE_RS04775	SM00014	Acid phosphatase homologues
THETHE_RS04795	SM01001	AIR carboxylase
THETHE_RS04895	SM01130	THETHE_RS04895
THETHE_RS04900	SM00859	Semialdehyde dehydrogenase, NAD binding domain
THETHE_RS04915	SM01230	THETHE_RS04915
THETHE_RS04920	SM00448	cheY-homologous receiver domain
THETHE_RS04920	SM01012	THETHE_RS04920
THETHE_RS04955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
THETHE_RS04970	SM00636	THETHE_RS04970
THETHE_RS05025	SM00636	THETHE_RS05025
THETHE_RS05060	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
THETHE_RS05060	SM00475	5'-3' exonuclease
THETHE_RS05060	SM00482	DNA polymerase A domain
THETHE_RS05095	SM00287	Bacterial SH3 domain homologues
THETHE_RS05100	SM00838	Elongation factor G C-terminus
THETHE_RS05135	SM00481	DNA polymerase alpha chain like domain
THETHE_RS05145	SM00387	Histidine kinase-like ATPases
THETHE_RS05155	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
THETHE_RS05160	SM00902	Iron hydrogenase small subunit
THETHE_RS05160	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
THETHE_RS05220	SM00851	MGS-like domain
THETHE_RS05235	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS05245	SM00316	Ribosomal protein S1-like RNA-binding domain
THETHE_RS05280	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THETHE_RS05305	SM00936	Penicillin-binding protein 5, C-terminal domain 
THETHE_RS05310	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THETHE_RS05405	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
THETHE_RS05420	SM00831	Cation transporter/ATPase, N-terminus
THETHE_RS05430	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS05435	SM00347	helix_turn_helix multiple antibiotic resistance protein
THETHE_RS05450	SM00849	Metallo-beta-lactamase superfamily
THETHE_RS05455	SM00849	Metallo-beta-lactamase superfamily
THETHE_RS05485	SM00646	THETHE_RS05485
THETHE_RS05505	SM00838	Elongation factor G C-terminus
THETHE_RS05510	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS05530	SM00271	DnaJ molecular chaperone homology domain
THETHE_RS05545	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS05580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THETHE_RS05590	SM00014	Acid phosphatase homologues
THETHE_RS05600	SM01133	THETHE_RS05600
THETHE_RS05610	SM00165	Ubiquitin associated domain
THETHE_RS05645	SM00316	Ribosomal protein S1-like RNA-binding domain
THETHE_RS05645	SM00357	Cold shock protein domain
THETHE_RS05645	SM00955	THETHE_RS05645
THETHE_RS05660	SM01230	THETHE_RS05660
THETHE_RS05690	SM00363	S4 RNA-binding domain
THETHE_RS05770	SM00052	Putative diguanylate phosphodiesterase
THETHE_RS05770	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THETHE_RS05770	SM00091	PAS domain
THETHE_RS05770	SM00267	diguanylate cyclase
THETHE_RS05775	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THETHE_RS05810	SM00861	Transketolase, pyrimidine binding domain
THETHE_RS05825	SM00363	S4 RNA-binding domain
THETHE_RS05860	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS05875	SM00530	Helix-turn-helix XRE-family like proteins 
THETHE_RS05895	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS05935	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
THETHE_RS05945	SM00732	Likely ribonuclease with RNase H fold.
THETHE_RS05960	SM00849	Metallo-beta-lactamase superfamily
THETHE_RS06005	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS06010	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS06075	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
THETHE_RS06095	SM00841	Elongation factor P, C-terminal
THETHE_RS06095	SM01185	THETHE_RS06095
THETHE_RS06105	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS06190	SM00861	Transketolase, pyrimidine binding domain
THETHE_RS06195	SM00363	S4 RNA-binding domain
THETHE_RS06215	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THETHE_RS06220	SM00448	cheY-homologous receiver domain
THETHE_RS06270	SM00936	Penicillin-binding protein 5, C-terminal domain 
THETHE_RS06280	SM00387	Histidine kinase-like ATPases
THETHE_RS06340	SM00936	Penicillin-binding protein 5, C-terminal domain 
THETHE_RS06355	SM00363	S4 RNA-binding domain
THETHE_RS06380	SM00257	Lysin motif
THETHE_RS06400	SM00855	Phosphoglycerate mutase family
THETHE_RS06420	SM00563	Phosphate acyltransferases
THETHE_RS06430	SM00316	Ribosomal protein S1-like RNA-binding domain
THETHE_RS06440	SM00138	Methyltransferase, chemotaxis proteins 
THETHE_RS06445	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS06455	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
THETHE_RS06455	SM00534	ATPase domain of DNA mismatch repair MUTS family
THETHE_RS06460	SM00853	MutL C terminal dimerisation domain
THETHE_RS06460	SM01340	THETHE_RS06460
THETHE_RS06500	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS06510	SM00998	Adenylosuccinate lyase C-terminus
THETHE_RS06520	SM00481	DNA polymerase alpha chain like domain
THETHE_RS06535	SM00322	K homology RNA-binding domain
THETHE_RS06535	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THETHE_RS06560	SM00933	THETHE_RS06560
THETHE_RS06570	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS06575	SM00852	Probable molybdopterin binding domain
THETHE_RS06585	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS06590	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS06590	SM00843	THETHE_RS06590
THETHE_RS06630	SM00316	Ribosomal protein S1-like RNA-binding domain
THETHE_RS06630	SM00322	K homology RNA-binding domain
THETHE_RS06635	SM01387	THETHE_RS06635
THETHE_RS06640	SM00904	Riboflavin kinase
THETHE_RS06675	SM00316	Ribosomal protein S1-like RNA-binding domain
THETHE_RS06685	SM00479	THETHE_RS06685
THETHE_RS06685	SM00481	DNA polymerase alpha chain like domain
THETHE_RS06700	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THETHE_RS06765	SM00260	Two component signalling adaptor domain
THETHE_RS06770	SM00073	Histidine Phosphotransfer domain
THETHE_RS06770	SM00260	Two component signalling adaptor domain
THETHE_RS06770	SM00387	Histidine kinase-like ATPases
THETHE_RS06770	SM01231	THETHE_RS06770
THETHE_RS06785	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS06785	SM00962	SRP54-type protein, GTPase domain
THETHE_RS06820	SM00448	cheY-homologous receiver domain
THETHE_RS06870	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS06910	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS06910	SM01086	C-terminal, D2-small domain, of ClpB protein
THETHE_RS06920	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
THETHE_RS06920	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
THETHE_RS06920	SM00493	THETHE_RS06920
THETHE_RS06945	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS06980	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS06980	SM00962	SRP54-type protein, GTPase domain
THETHE_RS06980	SM00963	SRP54-type protein, helical bundle domain
THETHE_RS07005	SM00421	helix_turn_helix, Lux Regulon
THETHE_RS07015	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS07040	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS07040	SM00962	SRP54-type protein, GTPase domain
THETHE_RS07040	SM00963	SRP54-type protein, helical bundle domain
THETHE_RS07045	SM00968	SMC proteins Flexible Hinge Domain
THETHE_RS07055	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS07060	SM00358	Double-stranded RNA binding motif
THETHE_RS07060	SM00535	Ribonuclease III family
THETHE_RS07065	SM00825	Beta-ketoacyl synthase
THETHE_RS07075	SM00822	THETHE_RS07075
THETHE_RS07080	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
THETHE_RS07165	SM00487	DEAD-like helicases superfamily
THETHE_RS07165	SM00490	helicase superfamily c-terminal domain
THETHE_RS07170	SM01120	THETHE_RS07170
THETHE_RS07170	SM01121	THETHE_RS07170
THETHE_RS07190	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
THETHE_RS07205	SM00220	Serine/Threonine protein kinases, catalytic domain
THETHE_RS07205	SM00740	THETHE_RS07205
THETHE_RS07210	SM00331	Sigma factor PP2C-like phosphatases
THETHE_RS07210	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
THETHE_RS07245	SM00487	DEAD-like helicases superfamily
THETHE_RS07245	SM00490	helicase superfamily c-terminal domain
THETHE_RS07255	SM01409	THETHE_RS07255
THETHE_RS07260	SM00072	Guanylate kinase homologues.
THETHE_RS07305	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
THETHE_RS07325	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
THETHE_RS07355	SM00849	Metallo-beta-lactamase superfamily
THETHE_RS07365	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THETHE_RS07365	SM00954	Region found in RelA / SpoT proteins
THETHE_RS07415	SM01323	THETHE_RS07415
THETHE_RS07440	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS07445	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THETHE_RS07460	SM00260	Two component signalling adaptor domain
THETHE_RS07480	SM00881	CoA binding domain
THETHE_RS07545	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS07575	SM00232	JAB/MPN domain
THETHE_RS07595	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS07605	SM00062	Bacterial periplasmic substrate-binding proteins
THETHE_RS07625	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS07650	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS07705	SM01004	Delta-aminolevulinic acid dehydratase
THETHE_RS07735	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS07740	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS07765	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS07770	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS07790	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS07800	SM00422	helix_turn_helix, mercury resistance
THETHE_RS07810	SM01211	THETHE_RS07810
THETHE_RS07825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS07825	SM00387	Histidine kinase-like ATPases
THETHE_RS07825	SM00388	His Kinase A (phosphoacceptor) domain
THETHE_RS07830	SM00448	cheY-homologous receiver domain
THETHE_RS07830	SM00862	Transcriptional regulatory protein, C terminal
THETHE_RS07875	SM00257	Lysin motif
THETHE_RS07880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS07880	SM00387	Histidine kinase-like ATPases
THETHE_RS07880	SM00388	His Kinase A (phosphoacceptor) domain
THETHE_RS07885	SM00448	cheY-homologous receiver domain
THETHE_RS07885	SM00862	Transcriptional regulatory protein, C terminal
THETHE_RS07960	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS07965	SM00062	Bacterial periplasmic substrate-binding proteins
THETHE_RS07985	SM00849	Metallo-beta-lactamase superfamily
THETHE_RS08010	SM00506	Appr-1"-p processing enzyme
THETHE_RS08025	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS08040	SM00636	THETHE_RS08040
THETHE_RS08045	SM00881	CoA binding domain
THETHE_RS08065	SM00893	Electron transfer flavoprotein domain
THETHE_RS08070	SM00893	Electron transfer flavoprotein domain
THETHE_RS08095	SM00893	Electron transfer flavoprotein domain
THETHE_RS08100	SM00893	Electron transfer flavoprotein domain
THETHE_RS08110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
THETHE_RS08110	SM00895	THETHE_RS08110
THETHE_RS08115	SM00530	Helix-turn-helix XRE-family like proteins 
THETHE_RS08340	SM00419	helix_turn_helix, cAMP Regulatory protein
THETHE_RS08390	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
THETHE_RS08460	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS08495	SM01207	THETHE_RS08495
THETHE_RS08535	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS08555	SM00091	PAS domain
THETHE_RS08555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS08555	SM00387	Histidine kinase-like ATPases
THETHE_RS08555	SM00388	His Kinase A (phosphoacceptor) domain
THETHE_RS08560	SM00448	cheY-homologous receiver domain
THETHE_RS08560	SM00862	Transcriptional regulatory protein, C terminal
THETHE_RS08590	SM00864	Tubulin/FtsZ family, GTPase domain
THETHE_RS08590	SM00865	Tubulin/FtsZ family, C-terminal domain
THETHE_RS08595	SM00842	Cell division protein FtsA
THETHE_RS08650	SM00740	THETHE_RS08650
THETHE_RS08690	SM00981	THETHE_RS08690
THETHE_RS08705	SM00331	Sigma factor PP2C-like phosphatases
THETHE_RS08760	SM00421	helix_turn_helix, Lux Regulon
THETHE_RS08760	SM00448	cheY-homologous receiver domain
THETHE_RS08765	SM00387	Histidine kinase-like ATPases
THETHE_RS08785	SM00463	Small MutS-related domain
THETHE_RS08785	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
THETHE_RS08785	SM00534	ATPase domain of DNA mismatch repair MUTS family
THETHE_RS08800	SM00873	B3/4 domain
THETHE_RS08800	SM00874	tRNA synthetase B5 domain
THETHE_RS08800	SM00896	Ferredoxin-fold anticodon binding domain
THETHE_RS08810	SM00967	RNA 2'-O ribose methyltransferase substrate binding
THETHE_RS08840	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
THETHE_RS08860	SM00267	diguanylate cyclase
THETHE_RS08860	SM00448	cheY-homologous receiver domain
THETHE_RS08880	SM00938	Nitrogen regulatory protein P-II
THETHE_RS08905	SM01001	AIR carboxylase
THETHE_RS08935	SM00852	Probable molybdopterin binding domain
THETHE_RS08945	SM00346	helix_turn_helix isocitrate lyase regulation
THETHE_RS08975	SM00938	Nitrogen regulatory protein P-II
THETHE_RS08980	SM00938	Nitrogen regulatory protein P-II
THETHE_RS09005	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS09065	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS09080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS09080	SM00387	Histidine kinase-like ATPases
THETHE_RS09080	SM00388	His Kinase A (phosphoacceptor) domain
THETHE_RS09085	SM00448	cheY-homologous receiver domain
THETHE_RS09085	SM00862	Transcriptional regulatory protein, C terminal
THETHE_RS09100	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS09115	SM00448	cheY-homologous receiver domain
THETHE_RS09115	SM00850	LytTr DNA-binding domain
THETHE_RS09120	SM00387	Histidine kinase-like ATPases
THETHE_RS09145	SM00487	DEAD-like helicases superfamily
THETHE_RS09145	SM00490	helicase superfamily c-terminal domain
THETHE_RS09195	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
THETHE_RS09315	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
THETHE_RS09335	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS09355	SM00354	helix_turn _helix lactose operon repressor
THETHE_RS09370	SM00642	Alpha-amylase domain
THETHE_RS09380	SM00642	Alpha-amylase domain
THETHE_RS09385	SM00640	Glycosyl hydrolases family 32
THETHE_RS09435	SM00354	helix_turn _helix lactose operon repressor
THETHE_RS09450	SM00354	helix_turn _helix lactose operon repressor
THETHE_RS09495	SM00831	Cation transporter/ATPase, N-terminus
THETHE_RS09545	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THETHE_RS09555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS09555	SM00387	Histidine kinase-like ATPases
THETHE_RS09555	SM00388	His Kinase A (phosphoacceptor) domain
THETHE_RS09560	SM00448	cheY-homologous receiver domain
THETHE_RS09560	SM00862	Transcriptional regulatory protein, C terminal
THETHE_RS09580	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS09580	SM00876	Biotin and Thiamin Synthesis associated domain
THETHE_RS09605	SM00387	Histidine kinase-like ATPases
THETHE_RS09665	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS09760	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS09765	SM00357	Cold shock protein domain
THETHE_RS09810	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THETHE_RS09820	SM00636	THETHE_RS09820
THETHE_RS09825	SM00849	Metallo-beta-lactamase superfamily
THETHE_RS09895	SM00400	zinc finger
THETHE_RS09895	SM00493	THETHE_RS09895
THETHE_RS09900	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THETHE_RS09915	SM01192	THETHE_RS09915
THETHE_RS09915	SM01193	THETHE_RS09915
THETHE_RS09935	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
THETHE_RS09965	SM01208	THETHE_RS09965
THETHE_RS09970	SM00478	endonuclease III
THETHE_RS09970	SM00525	THETHE_RS09970
THETHE_RS10005	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS10140	SM00917	LeuA allosteric (dimerisation) domain
THETHE_RS10190	SM00507	HNH nucleases
THETHE_RS10200	SM00028	Tetratricopeptide repeats
THETHE_RS10220	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THETHE_RS10315	SM00877	THETHE_RS10315
THETHE_RS10320	SM00877	THETHE_RS10320
THETHE_RS10350	SM00877	THETHE_RS10350
THETHE_RS10355	SM00877	THETHE_RS10355
THETHE_RS10375	SM00342	helix_turn_helix, arabinose operon control protein
THETHE_RS10375	SM00448	cheY-homologous receiver domain
THETHE_RS10405	SM01130	THETHE_RS10405
THETHE_RS10415	SM00481	DNA polymerase alpha chain like domain
THETHE_RS10425	SM00861	Transketolase, pyrimidine binding domain
THETHE_RS10435	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS10495	SM00646	THETHE_RS10495
THETHE_RS10505	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS10510	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS10535	SM00845	GatB domain
THETHE_RS10550	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THETHE_RS10550	SM00292	breast cancer carboxy-terminal domain
THETHE_RS10550	SM00532	Ligase N family
THETHE_RS10590	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS10590	SM00930	THETHE_RS10590
THETHE_RS10635	SM01209	THETHE_RS10635
THETHE_RS10635	SM01210	THETHE_RS10635
THETHE_RS10640	SM00798	AICARFT/IMPCHase bienzyme
THETHE_RS10640	SM00851	MGS-like domain
THETHE_RS10665	SM01001	AIR carboxylase
THETHE_RS10680	SM00116	Domain in cystathionine beta-synthase and other proteins.
THETHE_RS10680	SM01240	THETHE_RS10680
THETHE_RS10690	SM00883	Chaperonin 10 Kd subunit
THETHE_RS10720	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS10750	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS10755	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS10760	SM00028	Tetratricopeptide repeats
THETHE_RS10760	SM00530	Helix-turn-helix XRE-family like proteins 
THETHE_RS10765	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS10795	SM00478	endonuclease III
THETHE_RS10805	SM00387	Histidine kinase-like ATPases
THETHE_RS10810	SM00448	cheY-homologous receiver domain
THETHE_RS10810	SM00850	LytTr DNA-binding domain
THETHE_RS10820	SM00881	CoA binding domain
THETHE_RS10835	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS10895	SM00316	Ribosomal protein S1-like RNA-binding domain
THETHE_RS10895	SM00732	Likely ribonuclease with RNase H fold.
THETHE_RS10900	SM00937	THETHE_RS10900
THETHE_RS10905	SM00957	SecA DEAD-like domain
THETHE_RS10905	SM00958	SecA preprotein cross-linking domain
THETHE_RS10925	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THETHE_RS10940	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS10950	SM00062	Bacterial periplasmic substrate-binding proteins
THETHE_RS10950	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
THETHE_RS11005	SM00028	Tetratricopeptide repeats
THETHE_RS11060	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS11070	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THETHE_RS11125	SM00909	Sporulation and spore germination
THETHE_RS11130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS11130	SM00387	Histidine kinase-like ATPases
THETHE_RS11130	SM00388	His Kinase A (phosphoacceptor) domain
THETHE_RS11135	SM00448	cheY-homologous receiver domain
THETHE_RS11135	SM00862	Transcriptional regulatory protein, C terminal
THETHE_RS11145	SM00354	helix_turn _helix lactose operon repressor
THETHE_RS11210	SM00854	Bacterial capsule synthesis protein PGA_cap
THETHE_RS11235	SM01061	CAT RNA binding domain
THETHE_RS11255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THETHE_RS11260	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
THETHE_RS11275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
THETHE_RS11275	SM00866	THETHE_RS11275
THETHE_RS11290	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS11305	SM01221	THETHE_RS11305
THETHE_RS11305	SM01222	THETHE_RS11305
THETHE_RS11315	SM00890	Domain of unknown function
THETHE_RS11320	SM01329	THETHE_RS11320
THETHE_RS11335	SM00900	THETHE_RS11335
THETHE_RS11350	SM00271	DnaJ molecular chaperone homology domain
THETHE_RS11415	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS11480	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS11505	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS11525	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS11540	SM00421	helix_turn_helix, Lux Regulon
THETHE_RS11560	SM00981	THETHE_RS11560
THETHE_RS11575	SM00344	helix_turn_helix ASNC type
THETHE_RS11590	SM00899	THETHE_RS11590
THETHE_RS11595	SM00014	Acid phosphatase homologues
THETHE_RS11610	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS11655	SM00287	Bacterial SH3 domain homologues
THETHE_RS11655	SM00854	Bacterial capsule synthesis protein PGA_cap
THETHE_RS11700	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS11730	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS11805	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS11820	SM00342	helix_turn_helix, arabinose operon control protein
THETHE_RS11820	SM00448	cheY-homologous receiver domain
THETHE_RS11825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS11850	SM00354	helix_turn _helix lactose operon repressor
THETHE_RS11860	SM01350	THETHE_RS11860
THETHE_RS11880	SM00420	helix_turn_helix, Deoxyribose operon repressor
THETHE_RS11880	SM01134	THETHE_RS11880
THETHE_RS11895	SM00858	THETHE_RS11895
THETHE_RS11910	SM00710	Parallel beta-helix repeats
THETHE_RS11935	SM00354	helix_turn _helix lactose operon repressor
THETHE_RS11945	SM00257	Lysin motif
THETHE_RS12030	SM00244	prohibitin homologues
THETHE_RS12095	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS12125	SM00849	Metallo-beta-lactamase superfamily
THETHE_RS12125	SM01027	Beta-Casp domain
THETHE_RS12170	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
THETHE_RS12200	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS12235	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS12275	SM00861	Transketolase, pyrimidine binding domain
THETHE_RS12315	SM00354	helix_turn _helix lactose operon repressor
THETHE_RS12320	SM00849	Metallo-beta-lactamase superfamily
THETHE_RS12320	SM01027	Beta-Casp domain
THETHE_RS12395	SM00028	Tetratricopeptide repeats
THETHE_RS12400	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THETHE_RS12400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS12425	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS12430	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS12480	SM00060	Fibronectin type 3 domain
THETHE_RS12480	SM00429	ig-like, plexins, transcription factors
THETHE_RS12550	SM00226	Low molecular weight phosphatase family
THETHE_RS12565	SM00937	THETHE_RS12565
THETHE_RS12590	SM00357	Cold shock protein domain
THETHE_RS12590	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS12605	SM00448	cheY-homologous receiver domain
THETHE_RS12610	SM00646	THETHE_RS12610
THETHE_RS12630	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS12640	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS12645	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS12675	SM00420	helix_turn_helix, Deoxyribose operon repressor
THETHE_RS12675	SM01134	THETHE_RS12675
THETHE_RS12735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS12735	SM00387	Histidine kinase-like ATPases
THETHE_RS12735	SM00388	His Kinase A (phosphoacceptor) domain
THETHE_RS12740	SM00448	cheY-homologous receiver domain
THETHE_RS12740	SM00862	Transcriptional regulatory protein, C terminal
THETHE_RS12785	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
THETHE_RS12820	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THETHE_RS12820	SM00245	tail specific protease
THETHE_RS12850	SM00849	Metallo-beta-lactamase superfamily
THETHE_RS12865	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS12870	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS12875	SM00347	helix_turn_helix multiple antibiotic resistance protein
THETHE_RS12885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
THETHE_RS12890	SM00116	Domain in cystathionine beta-synthase and other proteins.
THETHE_RS12890	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS12925	SM00487	DEAD-like helicases superfamily
THETHE_RS13020	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS13025	SM00883	Chaperonin 10 Kd subunit
THETHE_RS13125	SM00421	helix_turn_helix, Lux Regulon
THETHE_RS13155	SM00530	Helix-turn-helix XRE-family like proteins 
THETHE_RS13160	SM00267	diguanylate cyclase
THETHE_RS13170	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THETHE_RS13195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS13195	SM00387	Histidine kinase-like ATPases
THETHE_RS13195	SM00388	His Kinase A (phosphoacceptor) domain
THETHE_RS13200	SM00448	cheY-homologous receiver domain
THETHE_RS13200	SM00862	Transcriptional regulatory protein, C terminal
THETHE_RS13210	SM00257	Lysin motif
THETHE_RS13210	SM01208	THETHE_RS13210
THETHE_RS13220	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS13280	SM00788	Adenylosuccinate synthetase
THETHE_RS13300	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THETHE_RS13300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS13310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THETHE_RS13310	SM00387	Histidine kinase-like ATPases
THETHE_RS13310	SM00388	His Kinase A (phosphoacceptor) domain
THETHE_RS13315	SM00448	cheY-homologous receiver domain
THETHE_RS13315	SM00862	Transcriptional regulatory protein, C terminal
THETHE_RS13325	SM00116	Domain in cystathionine beta-synthase and other proteins.
THETHE_RS13325	SM00924	MgtE intracellular N domain
THETHE_RS13330	SM00100	Cyclic nucleotide-monophosphate binding domain
THETHE_RS13330	SM00419	helix_turn_helix, cAMP Regulatory protein
THETHE_RS13335	SM00382	ATPases associated with a variety of cellular activities
THETHE_RS13405	SM00046	Diacylglycerol kinase catalytic domain (presumed)
THETHE_RS13420	SM00729	Elongator protein 3, MiaB family, Radical SAM
THETHE_RS13420	SM00876	Biotin and Thiamin Synthesis associated domain
THETHE_RS13425	SM00470	ParB-like nuclease domain
THETHE_RS13435	SM00470	ParB-like nuclease domain
THETHE_RS13450	SM01228	THETHE_RS13450
THETHE_RS13460	SM00393	Putative single-stranded nucleic acids-binding domain
THETHE_RS13460	SM01245	THETHE_RS13460
THETHE_RS13470	SM01234	THETHE_RS13470
THETHE_RS14195	SM00530	Helix-turn-helix XRE-family like proteins 
