locus-tag class description BD01_RS00110 PF02223 Thymidylate kinase BD01_RS00120 PF00483 Nucleotidyl transferase BD01_RS00125 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BD01_RS00125 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BD01_RS00135 PF11897 Protein of unknown function (DUF3417) BD01_RS00135 PF00343 Carbohydrate phosphorylase BD01_RS00145 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BD01_RS00145 PF00749 tRNA synthetases class I (E and Q), catalytic domain BD01_RS00180 PF00692 dUTPase BD01_RS00205 PF00687 Ribosomal protein L1p/L10e family BD01_RS00210 PF00298 Ribosomal protein L11, RNA binding domain BD01_RS00210 PF03946 Ribosomal protein L11, N-terminal domain BD01_RS00225 PF12327 FtsZ family, C-terminal domain BD01_RS00225 PF00091 Tubulin/FtsZ family, GTPase domain BD01_RS00235 PF16868 NMT1-like family BD01_RS00255 PF08745 PINc domain ribonuclease BD01_RS00270 PF02347 Glycine cleavage system P-protein BD01_RS00275 PF02347 Glycine cleavage system P-protein BD01_RS00300 PF13367 PrsW family intramembrane metalloprotease BD01_RS00325 PF13192 Thioredoxin domain BD01_RS00325 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS00330 PF01266 FAD dependent oxidoreductase BD01_RS00345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BD01_RS00345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BD01_RS00360 PF03009 Glycerophosphoryl diester phosphodiesterase family BD01_RS00365 PF03009 Glycerophosphoryl diester phosphodiesterase family BD01_RS00385 PF01934 Protein of unknown function DUF86 BD01_RS00390 PF12697 Alpha/beta hydrolase family BD01_RS00410 PF01554 MatE BD01_RS00415 PF01554 MatE BD01_RS00425 PF02384 N-6 DNA Methylase BD01_RS00430 PF02896 PEP-utilising enzyme, TIM barrel domain BD01_RS00430 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BD01_RS00430 PF00391 PEP-utilising enzyme, mobile domain BD01_RS00455 PF00082 Subtilase family BD01_RS00455 PF00082 Subtilase family BD01_RS00470 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS00470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BD01_RS00490 PF01926 50S ribosome-binding GTPase BD01_RS00490 PF01018 GTP1/OBG BD01_RS00490 PF04055 Radical SAM superfamily BD01_RS00515 PF00266 Aminotransferase class-V BD01_RS00525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BD01_RS00530 PF00501 AMP-binding enzyme BD01_RS00530 PF13193 AMP-binding enzyme C-terminal domain BD01_RS00530 PF16177 Acetyl-coenzyme A synthetase N-terminus BD01_RS00535 PF02769 AIR synthase related protein, C-terminal domain BD01_RS00535 PF00586 AIR synthase related protein, N-terminal domain BD01_RS00550 PF00708 Acylphosphatase BD01_RS00550 PF17788 HypF Kae1-like domain BD01_RS00550 PF07503 HypF finger BD01_RS00550 PF01300 Telomere recombination BD01_RS00555 PF01924 Hydrogenase formation hypA family BD01_RS00560 PF01455 HupF/HypC family BD01_RS00575 PF00440 Bacterial regulatory proteins, tetR family BD01_RS00580 PF12838 4Fe-4S dicluster domain BD01_RS00580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BD01_RS00580 PF00384 Molybdopterin oxidoreductase BD01_RS00580 PF01568 Molydopterin dinucleotide binding domain BD01_RS00580 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BD01_RS00585 PF13247 4Fe-4S dicluster domain BD01_RS00585 PF00037 4Fe-4S binding domain BD01_RS00590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BD01_RS00590 PF00361 Proton-conducting membrane transporter BD01_RS00590 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BD01_RS00590 PF13244 Domain of unknown function (DUF4040) BD01_RS00595 PF00361 Proton-conducting membrane transporter BD01_RS00600 PF00146 NADH dehydrogenase BD01_RS00605 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BD01_RS00605 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BD01_RS00605 PF00374 Nickel-dependent hydrogenase BD01_RS00610 PF12838 4Fe-4S dicluster domain BD01_RS00615 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BD01_RS00630 PF12804 MobA-like NTP transferase domain BD01_RS00655 PF10609 NUBPL iron-transfer P-loop NTPase BD01_RS00665 PF01545 Cation efflux family BD01_RS00695 PF01032 FecCD transport family BD01_RS00700 PF00005 ABC transporter BD01_RS00710 PF00753 Metallo-beta-lactamase superfamily BD01_RS00710 PF12706 Beta-lactamase superfamily domain BD01_RS00725 PF06560 Glucose-6-phosphate isomerase (GPI) BD01_RS00745 PF01050 Mannose-6-phosphate isomerase BD01_RS00745 PF00483 Nucleotidyl transferase BD01_RS00750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BD01_RS00750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BD01_RS00750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BD01_RS00750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BD01_RS00785 PF00005 ABC transporter BD01_RS00800 PF00005 ABC transporter BD01_RS00805 PF02361 Cobalt transport protein BD01_RS00815 PF01891 Cobalt uptake substrate-specific transmembrane region BD01_RS00815 PF13190 PDGLE domain BD01_RS00830 PF00013 KH domain BD01_RS00830 PF03725 3' exoribonuclease family, domain 2 BD01_RS00830 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BD01_RS00830 PF00575 S1 RNA binding domain BD01_RS00830 PF01138 3' exoribonuclease family, domain 1 BD01_RS00860 PF00155 Aminotransferase class I and II BD01_RS00875 PF01396 Topoisomerase DNA binding C4 zinc finger BD01_RS00875 PF01751 Toprim domain BD01_RS00875 PF01131 DNA topoisomerase BD01_RS00885 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS00900 PF13192 Thioredoxin domain BD01_RS00900 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS00910 PF04560 RNA polymerase Rpb2, domain 7 BD01_RS00910 PF10385 RNA polymerase beta subunit external 1 domain BD01_RS00910 PF00562 RNA polymerase Rpb2, domain 6 BD01_RS00910 PF04563 RNA polymerase beta subunit BD01_RS00910 PF04561 RNA polymerase Rpb2, domain 2 BD01_RS00910 PF04565 RNA polymerase Rpb2, domain 3 BD01_RS00915 PF04998 RNA polymerase Rpb1, domain 5 BD01_RS00915 PF00623 RNA polymerase Rpb1, domain 2 BD01_RS00915 PF04983 RNA polymerase Rpb1, domain 3 BD01_RS00915 PF04997 RNA polymerase Rpb1, domain 1 BD01_RS00915 PF05000 RNA polymerase Rpb1, domain 4 BD01_RS00920 PF00623 RNA polymerase Rpb1, domain 2 BD01_RS00920 PF04998 RNA polymerase Rpb1, domain 5 BD01_RS00920 PF05000 RNA polymerase Rpb1, domain 4 BD01_RS00920 PF04997 RNA polymerase Rpb1, domain 1 BD01_RS00920 PF04983 RNA polymerase Rpb1, domain 3 BD01_RS00940 PF00177 Ribosomal protein S7p/S5e BD01_RS00975 PF01676 Metalloenzyme superfamily BD01_RS00975 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BD01_RS01015 PF00270 DEAD/DEAH box helicase BD01_RS01015 PF18019 HD domain BD01_RS01015 PF00271 Helicase conserved C-terminal domain BD01_RS01025 PF01867 CRISPR associated protein Cas1 BD01_RS01030 PF09827 CRISPR associated protein Cas2 BD01_RS01035 PF13380 CoA binding domain BD01_RS01035 PF13607 Succinyl-CoA ligase like flavodoxin domain BD01_RS01055 PF01131 DNA topoisomerase BD01_RS01055 PF00270 DEAD/DEAH box helicase BD01_RS01055 PF17915 Reverse gyrase zinc finger BD01_RS01055 PF01751 Toprim domain BD01_RS01080 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BD01_RS01090 PF13419 Haloacid dehalogenase-like hydrolase BD01_RS01130 PF01966 HD domain BD01_RS01140 PF01336 OB-fold nucleic acid binding domain BD01_RS01140 PF00152 tRNA synthetases class II (D, K and N) BD01_RS01155 PF01142 tRNA pseudouridine synthase D (TruD) BD01_RS01170 PF07687 Peptidase dimerisation domain BD01_RS01170 PF01546 Peptidase family M20/M25/M40 BD01_RS01215 PF01368 DHH family BD01_RS01215 PF02272 DHHA1 domain BD01_RS01215 PF03948 Ribosomal protein L9, C-terminal domain BD01_RS01215 PF01281 Ribosomal protein L9, N-terminal domain BD01_RS01230 PF00133 tRNA synthetases class I (I, L, M and V) BD01_RS01230 PF09334 tRNA synthetases class I (M) BD01_RS01230 PF01588 Putative tRNA binding domain BD01_RS01245 PF00248 Aldo/keto reductase family BD01_RS01275 PF01676 Metalloenzyme superfamily BD01_RS01275 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase BD01_RS01280 PF01699 Sodium/calcium exchanger protein BD01_RS01285 PF01230 HIT domain BD01_RS01290 PF02475 Met-10+ like-protein BD01_RS01290 PF01938 TRAM domain BD01_RS01290 PF05958 tRNA (Uracil-5-)-methyltransferase BD01_RS01300 PF02511 Thymidylate synthase complementing protein BD01_RS01305 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BD01_RS01305 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BD01_RS01310 PF01189 16S rRNA methyltransferase RsmB/F BD01_RS01310 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BD01_RS01310 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BD01_RS01325 PF16653 Saccharopine dehydrogenase C-terminal domain BD01_RS01325 PF03435 Saccharopine dehydrogenase NADP binding domain BD01_RS01350 PF03600 Citrate transporter BD01_RS01360 PF00491 Arginase family BD01_RS01365 PF00999 Sodium/hydrogen exchanger family BD01_RS01370 PF00654 Voltage gated chloride channel BD01_RS01385 PF15714 Stage V sporulation protein T C-terminal, transcription factor BD01_RS01385 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BD01_RS01390 PF02769 AIR synthase related protein, C-terminal domain BD01_RS01390 PF00586 AIR synthase related protein, N-terminal domain BD01_RS01400 PF00534 Glycosyl transferases group 1 BD01_RS01400 PF13439 Glycosyltransferase Family 4 BD01_RS01405 PF01522 Polysaccharide deacetylase BD01_RS01430 PF01938 TRAM domain BD01_RS01430 PF04055 Radical SAM superfamily BD01_RS01430 PF00919 Uncharacterized protein family UPF0004 BD01_RS01440 PF00398 Ribosomal RNA adenine dimethylase BD01_RS01475 PF00710 Asparaginase, N-terminal BD01_RS01475 PF17763 Glutaminase/Asparaginase C-terminal domain BD01_RS01480 PF02934 GatB/GatE catalytic domain BD01_RS01480 PF02637 GatB domain BD01_RS01500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BD01_RS01505 PF00107 Zinc-binding dehydrogenase BD01_RS01505 PF08240 Alcohol dehydrogenase GroES-like domain BD01_RS01510 PF01409 tRNA synthetases class II core domain (F) BD01_RS01520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BD01_RS01520 PF03484 tRNA synthetase B5 domain BD01_RS01525 PF01416 tRNA pseudouridine synthase BD01_RS01530 PF04851 Type III restriction enzyme, res subunit BD01_RS01530 PF02151 UvrB/uvrC motif BD01_RS01530 PF00271 Helicase conserved C-terminal domain BD01_RS01530 PF12344 Ultra-violet resistance protein B BD01_RS01530 PF17757 UvrB interaction domain BD01_RS01535 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BD01_RS01545 PF00005 ABC transporter BD01_RS01575 PF00809 Pterin binding enzyme BD01_RS01580 PF01594 AI-2E family transporter BD01_RS01590 PF01343 Peptidase family S49 BD01_RS01625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD01_RS01625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD01_RS01625 PF02824 TGS domain BD01_RS01625 PF03129 Anticodon binding domain BD01_RS01640 PF01255 Putative undecaprenyl diphosphate synthase BD01_RS01645 PF00132 Bacterial transferase hexapeptide (six repeats) BD01_RS01660 PF05343 M42 glutamyl aminopeptidase BD01_RS01680 PF00005 ABC transporter BD01_RS01685 PF02386 Cation transport protein BD01_RS01690 PF00557 Metallopeptidase family M24 BD01_RS01700 PF00571 CBS domain BD01_RS01700 PF00478 IMP dehydrogenase / GMP reductase domain BD01_RS01710 PF00483 Nucleotidyl transferase BD01_RS01720 PF16123 Hydroxyacylglutathione hydrolase C-terminus BD01_RS01720 PF00753 Metallo-beta-lactamase superfamily BD01_RS01725 PF01926 50S ribosome-binding GTPase BD01_RS01725 PF01018 GTP1/OBG BD01_RS01725 PF09269 Domain of unknown function (DUF1967) BD01_RS01750 PF00117 Glutamine amidotransferase class-I BD01_RS01750 PF06418 CTP synthase N-terminus BD01_RS01775 PF04055 Radical SAM superfamily BD01_RS01795 PF00004 ATPase family associated with various cellular activities (AAA) BD01_RS01795 PF01434 Peptidase family M41 BD01_RS01795 PF17862 AAA+ lid domain BD01_RS01815 PF01161 Phosphatidylethanolamine-binding protein BD01_RS01860 PF03063 Prismane/CO dehydrogenase family BD01_RS01870 PF01321 Creatinase/Prolidase N-terminal domain BD01_RS01870 PF00557 Metallopeptidase family M24 BD01_RS01880 PF00202 Aminotransferase class-III BD01_RS01885 PF00860 Permease family BD01_RS01895 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BD01_RS01900 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BD01_RS01900 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BD01_RS01905 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BD01_RS01915 PF00361 Proton-conducting membrane transporter BD01_RS01920 PF00361 Proton-conducting membrane transporter BD01_RS01925 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BD01_RS01930 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BD01_RS01930 PF00361 Proton-conducting membrane transporter BD01_RS01930 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BD01_RS01930 PF13244 Domain of unknown function (DUF4040) BD01_RS01940 PF03334 Na+/H+ antiporter subunit BD01_RS01945 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BD01_RS01950 PF01899 Na+/H+ ion antiporter subunit BD01_RS01960 PF06463 Molybdenum Cofactor Synthesis C BD01_RS01960 PF04055 Radical SAM superfamily BD01_RS01975 PF02350 UDP-N-acetylglucosamine 2-epimerase BD01_RS01980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BD01_RS01980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BD01_RS01980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BD01_RS02000 PF05746 DALR anticodon binding domain BD01_RS02000 PF00750 tRNA synthetases class I (R) BD01_RS02000 PF03485 Arginyl tRNA synthetase N terminal domain BD01_RS02065 PF05343 M42 glutamyl aminopeptidase BD01_RS02140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BD01_RS02145 PF00970 Oxidoreductase FAD-binding domain BD01_RS02145 PF00175 Oxidoreductase NAD-binding domain BD01_RS02145 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BD01_RS02160 PF01497 Periplasmic binding protein BD01_RS02165 PF01381 Helix-turn-helix BD01_RS02180 PF02080 TrkA-C domain BD01_RS02180 PF02254 TrkA-N domain BD01_RS02200 PF04493 Endonuclease V BD01_RS02210 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) BD01_RS02220 PF00149 Calcineurin-like phosphoesterase BD01_RS02230 PF00155 Aminotransferase class I and II BD01_RS02250 PF13419 Haloacid dehalogenase-like hydrolase BD01_RS02255 PF01458 Uncharacterized protein family (UPF0051) BD01_RS02260 PF00005 ABC transporter BD01_RS02265 PF05362 Lon protease (S16) C-terminal proteolytic domain BD01_RS02265 PF02190 ATP-dependent protease La (LON) substrate-binding domain BD01_RS02265 PF00004 ATPase family associated with various cellular activities (AAA) BD01_RS02275 PF01042 Endoribonuclease L-PSP BD01_RS02285 PF01022 Bacterial regulatory protein, arsR family BD01_RS02290 PF03819 MazG nucleotide pyrophosphohydrolase domain BD01_RS02295 PF13404 AsnC-type helix-turn-helix domain BD01_RS02295 PF01037 Lrp/AsnC ligand binding domain BD01_RS02300 PF01940 Integral membrane protein DUF92 BD01_RS02305 PF02568 Thiamine biosynthesis protein (ThiI) BD01_RS02305 PF02926 THUMP domain BD01_RS02330 PF00312 Ribosomal protein S15 BD01_RS02405 PF07690 Major Facilitator Superfamily BD01_RS02425 PF01923 Cobalamin adenosyltransferase BD01_RS02435 PF01008 Initiation factor 2 subunit family BD01_RS02440 PF18073 Rubredoxin metal binding domain BD01_RS02445 PF00326 Prolyl oligopeptidase family BD01_RS02445 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BD01_RS02450 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BD01_RS02450 PF01872 RibD C-terminal domain BD01_RS02455 PF00677 Lumazine binding domain BD01_RS02460 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BD01_RS02460 PF00925 GTP cyclohydrolase II BD01_RS02465 PF00885 6,7-dimethyl-8-ribityllumazine synthase BD01_RS02485 PF01259 SAICAR synthetase BD01_RS02490 PF01964 Radical SAM ThiC family BD01_RS02500 PF02581 Thiamine monophosphate synthase BD01_RS02500 PF08543 Phosphomethylpyrimidine kinase BD01_RS02505 PF09383 NIL domain BD01_RS02505 PF00005 ABC transporter BD01_RS02520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BD01_RS02525 PF01406 tRNA synthetases class I (C) catalytic domain BD01_RS02525 PF09190 DALR domain BD01_RS02530 PF08264 Anticodon-binding domain of tRNA BD01_RS02530 PF09334 tRNA synthetases class I (M) BD01_RS02530 PF01588 Putative tRNA binding domain BD01_RS02565 PF01925 Sulfite exporter TauE/SafE BD01_RS02575 PF01925 Sulfite exporter TauE/SafE BD01_RS02585 PF18277 AbrB C-terminal domain BD01_RS02585 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BD01_RS02595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BD01_RS02595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BD01_RS02600 PF03129 Anticodon binding domain BD01_RS02600 PF09180 Prolyl-tRNA synthetase, C-terminal BD01_RS02600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD01_RS02610 PF02543 Carbamoyltransferase N-terminus BD01_RS02610 PF16861 Carbamoyltransferase C-terminus BD01_RS02615 PF01177 Asp/Glu/Hydantoin racemase BD01_RS02620 PF00924 Mechanosensitive ion channel BD01_RS02620 PF05552 Conserved TM helix BD01_RS02625 PF02441 Flavoprotein BD01_RS02625 PF04127 DNA / pantothenate metabolism flavoprotein BD01_RS02635 PF02641 Uncharacterized ACR, COG1993 BD01_RS02640 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BD01_RS02670 PF00578 AhpC/TSA family BD01_RS02675 PF02887 Pyruvate kinase, alpha/beta domain BD01_RS02675 PF00391 PEP-utilising enzyme, mobile domain BD01_RS02675 PF00224 Pyruvate kinase, barrel domain BD01_RS02685 PF02441 Flavoprotein BD01_RS02690 PF01037 Lrp/AsnC ligand binding domain BD01_RS02690 PF13404 AsnC-type helix-turn-helix domain BD01_RS02700 PF06071 Protein of unknown function (DUF933) BD01_RS02700 PF01926 50S ribosome-binding GTPase BD01_RS02705 PF00753 Metallo-beta-lactamase superfamily BD01_RS02705 PF16123 Hydroxyacylglutathione hydrolase C-terminus BD01_RS02710 PF01177 Asp/Glu/Hydantoin racemase BD01_RS02720 PF01523 Putative modulator of DNA gyrase BD01_RS02755 PF00133 tRNA synthetases class I (I, L, M and V) BD01_RS02755 PF08264 Anticodon-binding domain of tRNA BD01_RS02755 PF10458 Valyl tRNA synthetase tRNA binding arm BD01_RS02760 PF07690 Major Facilitator Superfamily BD01_RS02765 PF13649 Methyltransferase domain BD01_RS02770 PF00155 Aminotransferase class I and II BD01_RS02775 PF03186 CobD/Cbib protein BD01_RS02820 PF12804 MobA-like NTP transferase domain BD01_RS02830 PF07685 CobB/CobQ-like glutamine amidotransferase domain BD01_RS02835 PF02277 Phosphoribosyltransferase BD01_RS02855 PF00994 Probable molybdopterin binding domain BD01_RS02860 PF00994 Probable molybdopterin binding domain BD01_RS02860 PF03454 MoeA C-terminal region (domain IV) BD01_RS02860 PF03453 MoeA N-terminal region (domain I and II) BD01_RS02885 PF01966 HD domain BD01_RS02895 PF13302 Acetyltransferase (GNAT) domain BD01_RS02900 PF00578 AhpC/TSA family BD01_RS02900 PF10417 C-terminal domain of 1-Cys peroxiredoxin BD01_RS02905 PF01568 Molydopterin dinucleotide binding domain BD01_RS02905 PF00384 Molybdopterin oxidoreductase BD01_RS02905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BD01_RS02930 PF00464 Serine hydroxymethyltransferase BD01_RS02935 PF05958 tRNA (Uracil-5-)-methyltransferase BD01_RS02945 PF08364 Bacterial translation initiation factor IF-2 associated region BD01_RS02945 PF11987 Translation-initiation factor 2 BD01_RS02945 PF00009 Elongation factor Tu GTP binding domain BD01_RS02945 PF04760 Translation initiation factor IF-2, N-terminal region BD01_RS02955 PF00334 Nucleoside diphosphate kinase BD01_RS02985 PF01507 Phosphoadenosine phosphosulfate reductase family BD01_RS03035 PF13419 Haloacid dehalogenase-like hydrolase BD01_RS03045 PF02146 Sir2 family BD01_RS03055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BD01_RS03055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BD01_RS03080 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system BD01_RS03080 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system BD01_RS03095 PF01624 MutS domain I BD01_RS03095 PF00488 MutS domain V BD01_RS03095 PF05192 MutS domain III BD01_RS03095 PF05190 MutS family domain IV BD01_RS03095 PF05188 MutS domain II BD01_RS03100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD01_RS03100 PF00672 HAMP domain BD01_RS03100 PF02743 Cache domain BD01_RS03105 PF03793 PASTA domain BD01_RS03105 PF00069 Protein kinase domain BD01_RS03115 PF00118 TCP-1/cpn60 chaperonin family BD01_RS03120 PF01435 Peptidase family M48 BD01_RS03125 PF01979 Amidohydrolase family BD01_RS03135 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BD01_RS03135 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS03140 PF01916 Deoxyhypusine synthase BD01_RS03160 PF03600 Citrate transporter BD01_RS03175 PF00881 Nitroreductase family BD01_RS03190 PF00361 Proton-conducting membrane transporter BD01_RS03195 PF01899 Na+/H+ ion antiporter subunit BD01_RS03200 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BD01_RS03215 PF03334 Na+/H+ antiporter subunit BD01_RS03220 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BD01_RS03225 PF00361 Proton-conducting membrane transporter BD01_RS03230 PF00361 Proton-conducting membrane transporter BD01_RS03230 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BD01_RS03235 PF00210 Ferritin-like domain BD01_RS03245 PF00753 Metallo-beta-lactamase superfamily BD01_RS03245 PF00258 Flavodoxin BD01_RS03250 PF02915 Rubrerythrin BD01_RS03255 PF00301 Rubredoxin BD01_RS03260 PF01880 Desulfoferrodoxin BD01_RS03325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD01_RS03325 PF02272 DHHA1 domain BD01_RS03325 PF01411 tRNA synthetases class II (A) BD01_RS03340 PF00005 ABC transporter BD01_RS03340 PF08402 TOBE domain BD01_RS03345 PF00528 Binding-protein-dependent transport system inner membrane component BD01_RS03365 PF01037 Lrp/AsnC ligand binding domain BD01_RS03365 PF13404 AsnC-type helix-turn-helix domain BD01_RS03395 PF02361 Cobalt transport protein BD01_RS03400 PF00005 ABC transporter BD01_RS03405 PF02632 BioY family BD01_RS03430 PF00326 Prolyl oligopeptidase family BD01_RS03430 PF07676 WD40-like Beta Propeller Repeat BD01_RS03435 PF08351 Domain of unknown function (DUF1726) BD01_RS03435 PF13718 GNAT acetyltransferase 2 BD01_RS03435 PF05127 Helicase BD01_RS03435 PF17176 tRNA-binding domain BD01_RS03475 PF00069 Protein kinase domain BD01_RS03475 PF03793 PASTA domain BD01_RS03480 PF01434 Peptidase family M41 BD01_RS03480 PF17862 AAA+ lid domain BD01_RS03480 PF00004 ATPase family associated with various cellular activities (AAA) BD01_RS03485 PF03793 PASTA domain BD01_RS03485 PF00069 Protein kinase domain BD01_RS03505 PF01979 Amidohydrolase family BD01_RS03510 PF00152 tRNA synthetases class II (D, K and N) BD01_RS03510 PF01336 OB-fold nucleic acid binding domain BD01_RS03530 PF01702 Queuine tRNA-ribosyltransferase BD01_RS03535 PF01384 Phosphate transporter family BD01_RS03540 PF00535 Glycosyl transferase family 2 BD01_RS03550 PF08494 DEAD/H associated BD01_RS03550 PF00271 Helicase conserved C-terminal domain BD01_RS03550 PF00270 DEAD/DEAH box helicase BD01_RS03555 PF00557 Metallopeptidase family M24 BD01_RS03555 PF01321 Creatinase/Prolidase N-terminal domain BD01_RS03570 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase BD01_RS03590 PF01554 MatE BD01_RS03605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD01_RS03605 PF03129 Anticodon binding domain BD01_RS03610 PF01934 Protein of unknown function DUF86 BD01_RS03630 PF02594 Uncharacterised ACR, YggU family COG1872 BD01_RS03640 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BD01_RS03640 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BD01_RS03645 PF00994 Probable molybdopterin binding domain BD01_RS03645 PF18146 Damage-inducible protein CinA KH domain BD01_RS03645 PF02464 Competence-damaged protein BD01_RS03670 PF06508 Queuosine biosynthesis protein QueC BD01_RS03685 PF04023 FeoA domain BD01_RS03685 PF17910 FeoB cytosolic helical domain BD01_RS03685 PF07670 Nucleoside recognition BD01_RS03685 PF02421 Ferrous iron transport protein B BD01_RS03685 PF07664 Ferrous iron transport protein B C terminus BD01_RS03695 PF00483 Nucleotidyl transferase BD01_RS03700 PF00156 Phosphoribosyl transferase domain BD01_RS03720 PF01297 Zinc-uptake complex component A periplasmic BD01_RS03725 PF02653 Branched-chain amino acid transport system / permease component BD01_RS03730 PF02653 Branched-chain amino acid transport system / permease component BD01_RS03735 PF00005 ABC transporter BD01_RS03740 PF02608 ABC transporter substrate-binding protein PnrA-like BD01_RS03750 PF00448 SRP54-type protein, GTPase domain BD01_RS03750 PF02881 SRP54-type protein, helical bundle domain BD01_RS03770 PF01975 Survival protein SurE BD01_RS03805 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BD01_RS03805 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BD01_RS03805 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BD01_RS03810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD01_RS03830 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BD01_RS03830 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BD01_RS03830 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BD01_RS03835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD01_RS03865 PF01242 6-pyruvoyl tetrahydropterin synthase BD01_RS03870 PF02545 Maf-like protein BD01_RS03885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BD01_RS03895 PF00733 Asparagine synthase BD01_RS03895 PF13537 Glutamine amidotransferase domain BD01_RS03900 PF00534 Glycosyl transferases group 1 BD01_RS03900 PF13439 Glycosyltransferase Family 4 BD01_RS03905 PF01300 Telomere recombination BD01_RS03905 PF03481 Putative GTP-binding controlling metal-binding BD01_RS03930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD01_RS03930 PF02403 Seryl-tRNA synthetase N-terminal domain BD01_RS03935 PF17862 AAA+ lid domain BD01_RS03935 PF00004 ATPase family associated with various cellular activities (AAA) BD01_RS03935 PF06480 FtsH Extracellular BD01_RS03935 PF01434 Peptidase family M41 BD01_RS03940 PF03453 MoeA N-terminal region (domain I and II) BD01_RS03940 PF00994 Probable molybdopterin binding domain BD01_RS03940 PF03454 MoeA C-terminal region (domain IV) BD01_RS03950 PF17862 AAA+ lid domain BD01_RS03950 PF01434 Peptidase family M41 BD01_RS03950 PF06480 FtsH Extracellular BD01_RS03950 PF00004 ATPase family associated with various cellular activities (AAA) BD01_RS03960 PF16363 GDP-mannose 4,6 dehydratase BD01_RS03970 PF00709 Adenylosuccinate synthetase BD01_RS03980 PF12146 Serine aminopeptidase, S33 BD01_RS04005 PF02374 Anion-transporting ATPase BD01_RS04005 PF17886 HSP20-like domain found in ArsA BD01_RS04015 PF13722 5TM C-terminal transporter carbon starvation CstA BD01_RS04015 PF02554 Carbon starvation protein CstA BD01_RS04020 PF00682 HMGL-like BD01_RS04020 PF00364 Biotin-requiring enzyme BD01_RS04020 PF02436 Conserved carboxylase domain BD01_RS04025 PF01791 DeoC/LacD family aldolase BD01_RS04030 PF02237 Biotin protein ligase C terminal domain BD01_RS04030 PF08279 HTH domain BD01_RS04030 PF03099 Biotin/lipoate A/B protein ligase family BD01_RS04035 PF00375 Sodium:dicarboxylate symporter family BD01_RS04115 PF13380 CoA binding domain BD01_RS04115 PF13607 Succinyl-CoA ligase like flavodoxin domain BD01_RS04140 PF10609 NUBPL iron-transfer P-loop NTPase BD01_RS04145 PF01883 Iron-sulfur cluster assembly protein BD01_RS04145 PF10609 NUBPL iron-transfer P-loop NTPase BD01_RS04180 PF00005 ABC transporter BD01_RS04185 PF01032 FecCD transport family BD01_RS04190 PF01497 Periplasmic binding protein BD01_RS04195 PF00171 Aldehyde dehydrogenase family BD01_RS04200 PF01980 tRNA-methyltransferase O BD01_RS04200 PF18389 TrmO C-terminal domain BD01_RS04230 PF12804 MobA-like NTP transferase domain BD01_RS04230 PF00132 Bacterial transferase hexapeptide (six repeats) BD01_RS04230 PF03479 Plants and Prokaryotes Conserved (PCC) domain BD01_RS04245 PF02001 Protein of unknown function DUF134 BD01_RS04255 PF10397 Adenylosuccinate lyase C-terminus BD01_RS04255 PF00206 Lyase BD01_RS04270 PF00571 CBS domain BD01_RS04270 PF01380 SIS domain BD01_RS04280 PF01008 Initiation factor 2 subunit family BD01_RS04290 PF00465 Iron-containing alcohol dehydrogenase BD01_RS04295 PF07690 Major Facilitator Superfamily BD01_RS04310 PF00270 DEAD/DEAH box helicase BD01_RS04310 PF00271 Helicase conserved C-terminal domain BD01_RS04310 PF08494 DEAD/H associated BD01_RS04320 PF07687 Peptidase dimerisation domain BD01_RS04320 PF01546 Peptidase family M20/M25/M40 BD01_RS04325 PF00753 Metallo-beta-lactamase superfamily BD01_RS04340 PF01026 TatD related DNase BD01_RS04355 PF02811 PHP domain BD01_RS04360 PF02310 B12 binding domain BD01_RS04360 PF01642 Methylmalonyl-CoA mutase BD01_RS04380 PF02463 RecF/RecN/SMC N terminal domain BD01_RS04380 PF06470 SMC proteins Flexible Hinge Domain BD01_RS04420 PF00271 Helicase conserved C-terminal domain BD01_RS04420 PF00270 DEAD/DEAH box helicase BD01_RS04445 PF00270 DEAD/DEAH box helicase BD01_RS04445 PF00271 Helicase conserved C-terminal domain BD01_RS04460 PF00338 Ribosomal protein S10p/S20e BD01_RS04465 PF03143 Elongation factor Tu C-terminal domain BD01_RS04465 PF00009 Elongation factor Tu GTP binding domain BD01_RS04465 PF03144 Elongation factor Tu domain 2 BD01_RS04470 PF00679 Elongation factor G C-terminus BD01_RS04470 PF00009 Elongation factor Tu GTP binding domain BD01_RS04470 PF03764 Elongation factor G, domain IV BD01_RS04470 PF03144 Elongation factor Tu domain 2 BD01_RS04470 PF14492 Elongation Factor G, domain II BD01_RS04475 PF01966 HD domain BD01_RS04480 PF00005 ABC transporter BD01_RS04515 PF02649 Type I GTP cyclohydrolase folE2 BD01_RS04535 PF00512 His Kinase A (phospho-acceptor) domain BD01_RS04535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD01_RS04535 PF00672 HAMP domain BD01_RS04555 PF00005 ABC transporter BD01_RS04565 PF01351 Ribonuclease HII BD01_RS04585 PF01380 SIS domain BD01_RS04600 PF01910 Thiamine-binding protein BD01_RS04615 PF05191 Adenylate kinase, active site lid BD01_RS04650 PF01884 PcrB family BD01_RS04670 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 BD01_RS04670 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain BD01_RS04730 PF02769 AIR synthase related protein, C-terminal domain BD01_RS04730 PF00586 AIR synthase related protein, N-terminal domain BD01_RS04735 PF00005 ABC transporter BD01_RS04745 PF01205 Uncharacterized protein family UPF0029 BD01_RS04745 PF09186 Domain of unknown function (DUF1949) BD01_RS04770 PF02548 Ketopantoate hydroxymethyltransferase BD01_RS04790 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BD01_RS04790 PF01189 16S rRNA methyltransferase RsmB/F BD01_RS04790 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BD01_RS04800 PF01139 tRNA-splicing ligase RtcB BD01_RS04815 PF00005 ABC transporter BD01_RS04820 PF01967 MoaC family BD01_RS04830 PF00591 Glycosyl transferase family, a/b domain BD01_RS04830 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BD01_RS04830 PF02885 Glycosyl transferase family, helical bundle domain BD01_RS04845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BD01_RS04850 PF01145 SPFH domain / Band 7 family BD01_RS04850 PF16200 C-terminal region of band_7 BD01_RS04865 PF00730 HhH-GPD superfamily base excision DNA repair protein BD01_RS04885 PF01202 Shikimate kinase BD01_RS04895 PF03746 LamB/YcsF family BD01_RS04900 PF02682 Carboxyltransferase domain, subdomain C and D BD01_RS04915 PF02626 Carboxyltransferase domain, subdomain A and B BD01_RS04925 PF00465 Iron-containing alcohol dehydrogenase BD01_RS04940 PF00459 Inositol monophosphatase family BD01_RS04960 PF06733 DEAD_2 BD01_RS04960 PF13307 Helicase C-terminal domain BD01_RS04975 PF05343 M42 glutamyl aminopeptidase BD01_RS04985 PF17746 SfsA N-terminal OB domain BD01_RS04985 PF03749 Sugar fermentation stimulation protein RE domain BD01_RS04995 PF02899 Phage integrase, N-terminal SAM-like domain BD01_RS04995 PF00589 Phage integrase family BD01_RS05005 PF17645 Arylmalonate decarboxylase BD01_RS05020 PF02568 Thiamine biosynthesis protein (ThiI) BD01_RS05020 PF02926 THUMP domain BD01_RS05030 PF02926 THUMP domain BD01_RS05030 PF02568 Thiamine biosynthesis protein (ThiI) BD01_RS05035 PF00291 Pyridoxal-phosphate dependent enzyme BD01_RS05045 PF13607 Succinyl-CoA ligase like flavodoxin domain BD01_RS05045 PF00583 Acetyltransferase (GNAT) family BD01_RS05045 PF13380 CoA binding domain BD01_RS05050 PF13607 Succinyl-CoA ligase like flavodoxin domain BD01_RS05050 PF13380 CoA binding domain BD01_RS05080 PF00730 HhH-GPD superfamily base excision DNA repair protein BD01_RS05080 PF00633 Helix-hairpin-helix motif BD01_RS05080 PF10576 Iron-sulfur binding domain of endonuclease III BD01_RS05115 PF03551 Transcriptional regulator PadR-like family BD01_RS05120 PF00162 Phosphoglycerate kinase BD01_RS05140 PF01642 Methylmalonyl-CoA mutase BD01_RS05140 PF02310 B12 binding domain BD01_RS05150 PF00005 ABC transporter BD01_RS05165 PF00011 Hsp20/alpha crystallin family BD01_RS05170 PF01434 Peptidase family M41 BD01_RS05170 PF06480 FtsH Extracellular BD01_RS05170 PF17862 AAA+ lid domain BD01_RS05170 PF00004 ATPase family associated with various cellular activities (AAA) BD01_RS05220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD01_RS05225 PF00528 Binding-protein-dependent transport system inner membrane component BD01_RS05230 PF00528 Binding-protein-dependent transport system inner membrane component BD01_RS05230 PF12911 N-terminal TM domain of oligopeptide transport permease C BD01_RS05235 PF00005 ABC transporter BD01_RS05235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD01_RS05240 PF00005 ABC transporter BD01_RS05240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD01_RS05255 PF12706 Beta-lactamase superfamily domain BD01_RS05280 PF00881 Nitroreductase family BD01_RS05385 PF07690 Major Facilitator Superfamily BD01_RS05390 PF01467 Cytidylyltransferase-like BD01_RS05390 PF00293 NUDIX domain BD01_RS05420 PF13419 Haloacid dehalogenase-like hydrolase BD01_RS05465 PF00437 Type II/IV secretion system protein BD01_RS05470 PF18073 Rubredoxin metal binding domain BD01_RS05525 PF00891 O-methyltransferase domain BD01_RS05540 PF01584 CheW-like domain BD01_RS05545 PF00672 HAMP domain BD01_RS05545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD01_RS05545 PF16591 Helical bimodular sensor domain BD01_RS05550 PF03705 CheR methyltransferase, all-alpha domain BD01_RS05550 PF01739 CheR methyltransferase, SAM binding domain BD01_RS05555 PF00072 Response regulator receiver domain BD01_RS05560 PF00072 Response regulator receiver domain BD01_RS05560 PF01339 CheB methylesterase BD01_RS05565 PF01627 Hpt domain BD01_RS05565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD01_RS05565 PF02895 Signal transducing histidine kinase, homodimeric domain BD01_RS05565 PF01584 CheW-like domain BD01_RS05565 PF07194 P2 response regulator binding domain BD01_RS05580 PF03975 CheD chemotactic sensory transduction BD01_RS05585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD01_RS05585 PF00672 HAMP domain BD01_RS05585 PF02743 Cache domain BD01_RS05585 PF00672 HAMP domain BD01_RS05585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD01_RS05585 PF02743 Cache domain BD01_RS05590 PF03788 LrgA family BD01_RS05595 PF04172 LrgB-like family BD01_RS05670 PF01420 Type I restriction modification DNA specificity domain BD01_RS05690 PF05569 BlaR1 peptidase M56 BD01_RS05740 PF01934 Protein of unknown function DUF86 BD01_RS05745 PF03099 Biotin/lipoate A/B protein ligase family BD01_RS05760 PF07687 Peptidase dimerisation domain BD01_RS05760 PF01546 Peptidase family M20/M25/M40 BD01_RS05785 PF01523 Putative modulator of DNA gyrase BD01_RS05790 PF01523 Putative modulator of DNA gyrase BD01_RS05805 PF03437 BtpA family BD01_RS05815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BD01_RS05815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BD01_RS05815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BD01_RS05815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BD01_RS05840 PF01121 Dephospho-CoA kinase BD01_RS05855 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BD01_RS05855 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BD01_RS05860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BD01_RS05860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BD01_RS05865 PF10120 Thiamine-phosphate synthase BD01_RS05865 PF08543 Phosphomethylpyrimidine kinase BD01_RS05890 PF01411 tRNA synthetases class II (A) BD01_RS05890 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD01_RS05905 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BD01_RS05905 PF01871 AMMECR1 BD01_RS05925 PF00005 ABC transporter BD01_RS05930 PF01032 FecCD transport family BD01_RS05935 PF00583 Acetyltransferase (GNAT) family BD01_RS05950 PF00155 Aminotransferase class I and II BD01_RS05960 PF05496 Holliday junction DNA helicase RuvB P-loop domain BD01_RS05960 PF05491 RuvB C-terminal winged helix domain BD01_RS05960 PF17864 RuvB AAA lid domain BD01_RS05965 PF17864 RuvB AAA lid domain BD01_RS05965 PF05491 RuvB C-terminal winged helix domain BD01_RS05965 PF05496 Holliday junction DNA helicase RuvB P-loop domain BD01_RS05985 PF04055 Radical SAM superfamily BD01_RS05985 PF06463 Molybdenum Cofactor Synthesis C BD01_RS05995 PF10150 Ribonuclease E/G family BD01_RS06010 PF00154 recA bacterial DNA recombination protein BD01_RS06030 PF14572 Phosphoribosyl synthetase-associated domain BD01_RS06030 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BD01_RS06070 PF01921 tRNA synthetases class I (K) BD01_RS06075 PF08241 Methyltransferase domain BD01_RS06095 PF00083 Sugar (and other) transporter BD01_RS06105 PF01112 Asparaginase BD01_RS06115 PF04055 Radical SAM superfamily BD01_RS06130 PF07690 Major Facilitator Superfamily BD01_RS06135 PF00004 ATPase family associated with various cellular activities (AAA) BD01_RS06135 PF17862 AAA+ lid domain BD01_RS06135 PF06480 FtsH Extracellular BD01_RS06135 PF01434 Peptidase family M41 BD01_RS06145 PF00953 Glycosyl transferase family 4 BD01_RS06150 PF13419 Haloacid dehalogenase-like hydrolase BD01_RS06160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BD01_RS06165 PF01435 Peptidase family M48 BD01_RS06200 PF03477 ATP cone domain BD01_RS06200 PF13597 Anaerobic ribonucleoside-triphosphate reductase BD01_RS06215 PF00118 TCP-1/cpn60 chaperonin family BD01_RS06220 PF00005 ABC transporter BD01_RS06260 PF00571 CBS domain BD01_RS06260 PF00478 IMP dehydrogenase / GMP reductase domain BD01_RS06270 PF00005 ABC transporter BD01_RS06300 PF02445 Quinolinate synthetase A protein BD01_RS06305 PF13173 AAA domain BD01_RS06305 PF13635 Domain of unknown function (DUF4143) BD01_RS06310 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BD01_RS06310 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BD01_RS06345 PF01171 PP-loop family BD01_RS06355 PF13180 PDZ domain BD01_RS06360 PF00534 Glycosyl transferases group 1 BD01_RS06360 PF13439 Glycosyltransferase Family 4 BD01_RS06370 PF13439 Glycosyltransferase Family 4 BD01_RS06370 PF00534 Glycosyl transferases group 1 BD01_RS06380 PF00534 Glycosyl transferases group 1 BD01_RS06380 PF13477 Glycosyl transferase 4-like BD01_RS06385 PF00483 Nucleotidyl transferase BD01_RS06395 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BD01_RS06395 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BD01_RS06395 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BD01_RS06410 PF02585 GlcNAc-PI de-N-acetylase BD01_RS06425 PF00232 Glycosyl hydrolase family 1 BD01_RS06430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD01_RS06435 PF00528 Binding-protein-dependent transport system inner membrane component BD01_RS06440 PF00528 Binding-protein-dependent transport system inner membrane component BD01_RS06440 PF12911 N-terminal TM domain of oligopeptide transport permease C BD01_RS06445 PF00005 ABC transporter BD01_RS06445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD01_RS06450 PF00005 ABC transporter BD01_RS06450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD01_RS06455 PF01380 SIS domain BD01_RS06460 PF01301 Glycosyl hydrolases family 35 BD01_RS06465 PF01545 Cation efflux family BD01_RS06465 PF16916 Dimerisation domain of Zinc Transporter BD01_RS06470 PF00282 Pyridoxal-dependent decarboxylase conserved domain BD01_RS06475 PF00999 Sodium/hydrogen exchanger family BD01_RS06495 PF09095 Domain of unknown function (DUF1926) BD01_RS06495 PF09094 Domain of unknown function (DUF1925) BD01_RS06495 PF03065 Glycosyl hydrolase family 57 BD01_RS06505 PF01171 PP-loop family BD01_RS06525 PF00571 CBS domain BD01_RS06525 PF00478 IMP dehydrogenase / GMP reductase domain BD01_RS06530 PF00999 Sodium/hydrogen exchanger family BD01_RS06550 PF17202 Single cache domain 3 BD01_RS06550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD01_RS06550 PF00672 HAMP domain BD01_RS06560 PF01914 MarC family integral membrane protein BD01_RS06565 PF03129 Anticodon binding domain BD01_RS06565 PF13393 Histidyl-tRNA synthetase BD01_RS06610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD01_RS06610 PF02272 DHHA1 domain BD01_RS06610 PF01411 tRNA synthetases class II (A) BD01_RS06630 PF01784 NIF3 (NGG1p interacting factor 3) BD01_RS06635 PF16199 Radical_SAM C-terminal domain BD01_RS06635 PF00583 Acetyltransferase (GNAT) family BD01_RS06635 PF04055 Radical SAM superfamily BD01_RS06660 PF06745 KaiC BD01_RS06670 PF02675 S-adenosylmethionine decarboxylase BD01_RS06680 PF07549 SecD/SecF GG Motif BD01_RS06680 PF02355 Protein export membrane protein BD01_RS06685 PF02080 TrkA-C domain BD01_RS06685 PF02254 TrkA-N domain BD01_RS06695 PF01496 V-type ATPase 116kDa subunit family BD01_RS06705 PF01991 ATP synthase (E/31 kDa) subunit BD01_RS06720 PF02874 ATP synthase alpha/beta family, beta-barrel domain BD01_RS06720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD01_RS06720 PF16886 ATPsynthase alpha/beta subunit N-term extension BD01_RS06725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD01_RS06725 PF02874 ATP synthase alpha/beta family, beta-barrel domain BD01_RS06730 PF01813 ATP synthase subunit D BD01_RS06735 PF00258 Flavodoxin BD01_RS06735 PF01613 Flavin reductase like domain BD01_RS06740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD01_RS06740 PF00672 HAMP domain BD01_RS06740 PF05227 CHASE3 domain BD01_RS06745 PF01411 tRNA synthetases class II (A) BD01_RS06745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD01_RS06745 PF02272 DHHA1 domain BD01_RS06765 PF00528 Binding-protein-dependent transport system inner membrane component BD01_RS06780 PF00528 Binding-protein-dependent transport system inner membrane component BD01_RS06795 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BD01_RS06800 PF01979 Amidohydrolase family BD01_RS06810 PF00528 Binding-protein-dependent transport system inner membrane component BD01_RS06815 PF00528 Binding-protein-dependent transport system inner membrane component BD01_RS06815 PF12911 N-terminal TM domain of oligopeptide transport permease C BD01_RS06820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD01_RS06820 PF00005 ABC transporter BD01_RS06825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD01_RS06825 PF00005 ABC transporter BD01_RS06835 PF02540 NAD synthase BD01_RS06845 PF03951 Glutamine synthetase, beta-Grasp domain BD01_RS06845 PF00120 Glutamine synthetase, catalytic domain BD01_RS06880 PF06745 KaiC BD01_RS06900 PF10672 S-adenosylmethionine-dependent methyltransferase BD01_RS06900 PF17785 PUA-like domain BD01_RS06910 PF07687 Peptidase dimerisation domain BD01_RS06910 PF01546 Peptidase family M20/M25/M40 BD01_RS06915 PF12706 Beta-lactamase superfamily domain BD01_RS06915 PF00753 Metallo-beta-lactamase superfamily BD01_RS06920 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BD01_RS06920 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BD01_RS06920 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BD01_RS06920 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BD01_RS06930 PF11495 Archaeal transcriptional regulator TrmB BD01_RS06930 PF01978 Sugar-specific transcriptional regulator TrmB BD01_RS06935 PF00534 Glycosyl transferases group 1 BD01_RS06935 PF08323 Starch synthase catalytic domain BD01_RS06945 PF06968 Biotin and Thiamin Synthesis associated domain BD01_RS06945 PF04055 Radical SAM superfamily BD01_RS06970 PF01850 PIN domain BD01_RS06980 PF00133 tRNA synthetases class I (I, L, M and V) BD01_RS06980 PF08264 Anticodon-binding domain of tRNA BD01_RS06985 PF01931 Protein of unknown function DUF84 BD01_RS06995 PF13175 AAA ATPase domain BD01_RS07015 PF00892 EamA-like transporter family BD01_RS07040 PF13173 AAA domain BD01_RS07040 PF13635 Domain of unknown function (DUF4143) BD01_RS07050 PF00156 Phosphoribosyl transferase domain BD01_RS07065 PF03477 ATP cone domain BD01_RS07065 PF00317 Ribonucleotide reductase, all-alpha domain BD01_RS07065 PF02867 Ribonucleotide reductase, barrel domain BD01_RS07075 PF13344 Haloacid dehalogenase-like hydrolase BD01_RS07110 PF07726 ATPase family associated with various cellular activities (AAA) BD01_RS07110 PF17863 AAA lid domain BD01_RS07125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BD01_RS07125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BD01_RS07125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BD01_RS07130 PF00483 Nucleotidyl transferase BD01_RS07140 PF00483 Nucleotidyl transferase BD01_RS07145 PF16363 GDP-mannose 4,6 dehydratase BD01_RS07150 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BD01_RS07155 PF04321 RmlD substrate binding domain BD01_RS07160 PF16363 GDP-mannose 4,6 dehydratase BD01_RS07165 PF01943 Polysaccharide biosynthesis protein BD01_RS07175 PF13439 Glycosyltransferase Family 4 BD01_RS07175 PF00534 Glycosyl transferases group 1 BD01_RS07180 PF00534 Glycosyl transferases group 1 BD01_RS07185 PF00535 Glycosyl transferase family 2 BD01_RS07240 PF00719 Inorganic pyrophosphatase BD01_RS07245 PF00575 S1 RNA binding domain BD01_RS07270 PF05922 Peptidase inhibitor I9 BD01_RS07270 PF00082 Subtilase family BD01_RS07275 PF13847 Methyltransferase domain BD01_RS07275 PF17827 PrmC N-terminal domain BD01_RS07340 PF01914 MarC family integral membrane protein BD01_RS07355 PF01965 DJ-1/PfpI family BD01_RS07360 PF01037 Lrp/AsnC ligand binding domain BD01_RS07365 PF01926 50S ribosome-binding GTPase BD01_RS07365 PF01018 GTP1/OBG BD01_RS07365 PF09269 Domain of unknown function (DUF1967) BD01_RS07375 PF00474 Sodium:solute symporter family BD01_RS07380 PF08669 Glycine cleavage T-protein C-terminal barrel domain BD01_RS07380 PF01571 Aminomethyltransferase folate-binding domain BD01_RS07380 PF17806 Sarcosine oxidase A3 domain BD01_RS07380 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS07385 PF01266 FAD dependent oxidoreductase BD01_RS07390 PF07690 Major Facilitator Superfamily BD01_RS07395 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family BD01_RS07405 PF18267 Rubredoxin NAD+ reductase C-terminal domain BD01_RS07405 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS07405 PF04324 BFD-like [2Fe-2S] binding domain BD01_RS07405 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BD01_RS07405 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BD01_RS07430 PF00696 Amino acid kinase family BD01_RS07435 PF01266 FAD dependent oxidoreductase BD01_RS07455 PF17806 Sarcosine oxidase A3 domain BD01_RS07455 PF08669 Glycine cleavage T-protein C-terminal barrel domain BD01_RS07455 PF01571 Aminomethyltransferase folate-binding domain BD01_RS07455 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS07465 PF00291 Pyridoxal-phosphate dependent enzyme BD01_RS07470 PF01180 Dihydroorotate dehydrogenase BD01_RS07485 PF06508 Queuosine biosynthesis protein QueC BD01_RS07505 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BD01_RS07505 PF12557 Cob(I)alamin adenosyltransferase N terminal BD01_RS07515 PF00596 Class II Aldolase and Adducin N-terminal domain BD01_RS07530 PF13404 AsnC-type helix-turn-helix domain BD01_RS07530 PF01037 Lrp/AsnC ligand binding domain BD01_RS07535 PF05958 tRNA (Uracil-5-)-methyltransferase BD01_RS07535 PF01938 TRAM domain BD01_RS07545 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BD01_RS07550 PF00156 Phosphoribosyl transferase domain BD01_RS07560 PF01068 ATP dependent DNA ligase domain BD01_RS07560 PF04675 DNA ligase N terminus BD01_RS07560 PF04679 ATP dependent DNA ligase C terminal region BD01_RS07580 PF00005 ABC transporter BD01_RS07590 PF13186 Iron-sulfur cluster-binding domain BD01_RS07590 PF04055 Radical SAM superfamily BD01_RS07600 PF03553 Na+/H+ antiporter family BD01_RS07605 PF03167 Uracil DNA glycosylase superfamily BD01_RS07615 PF06463 Molybdenum Cofactor Synthesis C BD01_RS07615 PF04055 Radical SAM superfamily BD01_RS07625 PF02743 Cache domain BD01_RS07625 PF00672 HAMP domain BD01_RS07625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD01_RS07675 PF04199 Putative cyclase BD01_RS07680 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BD01_RS07680 PF05221 S-adenosyl-L-homocysteine hydrolase BD01_RS07690 PF01882 Protein of unknown function DUF58 BD01_RS07705 PF17863 AAA lid domain BD01_RS07705 PF07726 ATPase family associated with various cellular activities (AAA) BD01_RS07710 PF18389 TrmO C-terminal domain BD01_RS07710 PF01980 tRNA-methyltransferase O BD01_RS07715 PF00005 ABC transporter BD01_RS07715 PF08402 TOBE domain BD01_RS07720 PF00528 Binding-protein-dependent transport system inner membrane component BD01_RS07740 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BD01_RS07740 PF01926 50S ribosome-binding GTPase BD01_RS07770 PF01169 Uncharacterized protein family UPF0016 BD01_RS07775 PF00155 Aminotransferase class I and II BD01_RS07790 PF12327 FtsZ family, C-terminal domain BD01_RS07790 PF00091 Tubulin/FtsZ family, GTPase domain BD01_RS07795 PF13614 AAA domain BD01_RS07805 PF01467 Cytidylyltransferase-like BD01_RS07805 PF00294 pfkB family carbohydrate kinase BD01_RS07815 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BD01_RS07835 PF01066 CDP-alcohol phosphatidyltransferase BD01_RS07835 PF00483 Nucleotidyl transferase BD01_RS07860 PF00005 ABC transporter BD01_RS07875 PF13344 Haloacid dehalogenase-like hydrolase BD01_RS07875 PF00293 NUDIX domain BD01_RS07905 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BD01_RS07905 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BD01_RS07910 PF00265 Thymidine kinase BD01_RS07915 PF00291 Pyridoxal-phosphate dependent enzyme BD01_RS07935 PF03673 Uncharacterised protein family (UPF0128) BD01_RS07940 PF00535 Glycosyl transferase family 2 BD01_RS07945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BD01_RS07945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BD01_RS07950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BD01_RS07950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BD01_RS07955 PF05161 MOFRL family BD01_RS07955 PF13660 Domain of unknown function (DUF4147) BD01_RS07995 PF13380 CoA binding domain BD01_RS08025 PF01381 Helix-turn-helix BD01_RS08030 PF00005 ABC transporter BD01_RS08055 PF02535 ZIP Zinc transporter BD01_RS08065 PF01541 GIY-YIG catalytic domain BD01_RS08065 PF08459 UvrC Helix-hairpin-helix N-terminal BD01_RS08065 PF02151 UvrB/uvrC motif BD01_RS08085 PF08704 tRNA methyltransferase complex GCD14 subunit BD01_RS08095 PF00175 Oxidoreductase NAD-binding domain BD01_RS08095 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BD01_RS08095 PF00970 Oxidoreductase FAD-binding domain BD01_RS08100 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS08100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BD01_RS08100 PF13247 4Fe-4S dicluster domain BD01_RS08115 PF01597 Glycine cleavage H-protein BD01_RS08120 PF01899 Na+/H+ ion antiporter subunit BD01_RS08125 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BD01_RS08130 PF03334 Na+/H+ antiporter subunit BD01_RS08155 PF00361 Proton-conducting membrane transporter BD01_RS08180 PF17284 Spermidine synthase tetramerisation domain BD01_RS08215 PF00474 Sodium:solute symporter family BD01_RS08250 PF00850 Histone deacetylase domain BD01_RS08315 PF02803 Thiolase, C-terminal domain BD01_RS08315 PF00108 Thiolase, N-terminal domain BD01_RS08320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BD01_RS08320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BD01_RS08335 PF01008 Initiation factor 2 subunit family BD01_RS08340 PF00155 Aminotransferase class I and II BD01_RS08345 PF07722 Peptidase C26 BD01_RS08350 PF04055 Radical SAM superfamily BD01_RS08355 PF02566 OsmC-like protein BD01_RS08360 PF00117 Glutamine amidotransferase class-I BD01_RS08360 PF00958 GMP synthase C terminal domain BD01_RS08360 PF02540 NAD synthase BD01_RS08375 PF00958 GMP synthase C terminal domain BD01_RS08375 PF00117 Glutamine amidotransferase class-I BD01_RS08385 PF02769 AIR synthase related protein, C-terminal domain BD01_RS08385 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BD01_RS08385 PF00586 AIR synthase related protein, N-terminal domain BD01_RS08410 PF02844 Phosphoribosylglycinamide synthetase, N domain BD01_RS08410 PF02843 Phosphoribosylglycinamide synthetase, C domain BD01_RS08410 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BD01_RS08425 PF00731 AIR carboxylase BD01_RS08430 PF02222 ATP-grasp domain BD01_RS08435 PF02769 AIR synthase related protein, C-terminal domain BD01_RS08435 PF00586 AIR synthase related protein, N-terminal domain BD01_RS08445 PF01259 SAICAR synthetase BD01_RS08450 PF00156 Phosphoribosyl transferase domain BD01_RS08465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BD01_RS08465 PF00384 Molybdopterin oxidoreductase BD01_RS08465 PF01568 Molydopterin dinucleotide binding domain BD01_RS08470 PF01174 SNO glutamine amidotransferase family BD01_RS08475 PF01680 SOR/SNZ family BD01_RS08495 PF01470 Pyroglutamyl peptidase BD01_RS08510 PF04255 Protein of unknown function (DUF433) BD01_RS08515 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BD01_RS08530 PF00294 pfkB family carbohydrate kinase BD01_RS08545 PF07726 ATPase family associated with various cellular activities (AAA) BD01_RS08545 PF17863 AAA lid domain BD01_RS08570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BD01_RS08585 PF00437 Type II/IV secretion system protein BD01_RS08605 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BD01_RS08605 PF01926 50S ribosome-binding GTPase BD01_RS08610 PF01170 Putative RNA methylase family UPF0020 BD01_RS08610 PF02926 THUMP domain BD01_RS08620 PF01557 Fumarylacetoacetate (FAA) hydrolase family BD01_RS08630 PF00579 tRNA synthetases class I (W and Y) BD01_RS08650 PF12706 Beta-lactamase superfamily domain BD01_RS08655 PF13607 Succinyl-CoA ligase like flavodoxin domain BD01_RS08655 PF13380 CoA binding domain BD01_RS08660 PF01022 Bacterial regulatory protein, arsR family BD01_RS08680 PF01256 Carbohydrate kinase BD01_RS08680 PF03853 YjeF-related protein N-terminus BD01_RS08695 PF05496 Holliday junction DNA helicase RuvB P-loop domain BD01_RS08695 PF12002 MgsA AAA+ ATPase C terminal BD01_RS08695 PF16193 AAA C-terminal domain BD01_RS08695 PF01661 Macro domain BD01_RS08705 PF01979 Amidohydrolase family BD01_RS08715 PF01048 Phosphorylase superfamily BD01_RS08735 PF01939 Endonuclease NucS BD01_RS08765 PF00027 Cyclic nucleotide-binding domain BD01_RS08765 PF00520 Ion transport protein BD01_RS08850 PF00814 Glycoprotease family BD01_RS08860 PF01513 ATP-NAD kinase BD01_RS08870 PF01189 16S rRNA methyltransferase RsmB/F BD01_RS08870 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BD01_RS08870 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BD01_RS08915 PF00899 ThiF family BD01_RS08925 PF02391 MoaE protein BD01_RS08945 PF01725 Ham1 family BD01_RS08950 PF01037 Lrp/AsnC ligand binding domain BD01_RS08950 PF13404 AsnC-type helix-turn-helix domain BD01_RS08960 PF03952 Enolase, N-terminal domain BD01_RS08960 PF00113 Enolase, C-terminal TIM barrel domain BD01_RS08970 PF01791 DeoC/LacD family aldolase BD01_RS08985 PF00202 Aminotransferase class-III BD01_RS08995 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS09040 PF00146 NADH dehydrogenase BD01_RS09045 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BD01_RS09045 PF00374 Nickel-dependent hydrogenase BD01_RS09050 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BD01_RS09050 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BD01_RS09050 PF00374 Nickel-dependent hydrogenase BD01_RS09055 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BD01_RS09065 PF00361 Proton-conducting membrane transporter BD01_RS09070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BD01_RS09090 PF03334 Na+/H+ antiporter subunit BD01_RS09095 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BD01_RS09105 PF13247 4Fe-4S dicluster domain BD01_RS09105 PF12800 4Fe-4S binding domain BD01_RS09110 PF13247 4Fe-4S dicluster domain BD01_RS09110 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BD01_RS09110 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS09115 PF01226 Formate/nitrite transporter BD01_RS09125 PF13247 4Fe-4S dicluster domain BD01_RS09125 PF12800 4Fe-4S binding domain BD01_RS09130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BD01_RS09130 PF01568 Molydopterin dinucleotide binding domain BD01_RS09130 PF00384 Molybdopterin oxidoreductase BD01_RS09145 PF00374 Nickel-dependent hydrogenase BD01_RS09150 PF01938 TRAM domain BD01_RS09150 PF05958 tRNA (Uracil-5-)-methyltransferase BD01_RS09155 PF01938 TRAM domain BD01_RS09155 PF04055 Radical SAM superfamily BD01_RS09155 PF00919 Uncharacterized protein family UPF0004 BD01_RS09180 PF01384 Phosphate transporter family BD01_RS09205 PF07676 WD40-like Beta Propeller Repeat BD01_RS09205 PF00326 Prolyl oligopeptidase family BD01_RS09210 PF01555 DNA methylase BD01_RS09215 PF06745 KaiC BD01_RS09245 PF03949 Malic enzyme, NAD binding domain BD01_RS09245 PF00390 Malic enzyme, N-terminal domain BD01_RS09250 PF05681 Fumarate hydratase (Fumerase) BD01_RS09250 PF05683 Fumarase C-terminus BD01_RS09255 PF05681 Fumarate hydratase (Fumerase) BD01_RS09255 PF05683 Fumarase C-terminus BD01_RS09260 PF13635 Domain of unknown function (DUF4143) BD01_RS09260 PF13173 AAA domain BD01_RS09265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BD01_RS09265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BD01_RS09285 PF00588 SpoU rRNA Methylase family BD01_RS09305 PF00999 Sodium/hydrogen exchanger family BD01_RS09330 PF13167 GTP-binding GTPase N-terminal BD01_RS09330 PF01926 50S ribosome-binding GTPase BD01_RS09330 PF16360 GTP-binding GTPase Middle Region BD01_RS09335 PF01384 Phosphate transporter family BD01_RS09340 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BD01_RS09345 PF00037 4Fe-4S binding domain BD01_RS09350 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BD01_RS09350 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BD01_RS09355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD01_RS09360 PF00037 4Fe-4S binding domain BD01_RS09365 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BD01_RS09365 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BD01_RS09370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD01_RS09375 PF10609 NUBPL iron-transfer P-loop NTPase BD01_RS09400 PF00294 pfkB family carbohydrate kinase BD01_RS09410 PF00708 Acylphosphatase BD01_RS09420 PF01949 Protein of unknown function DUF99 BD01_RS09425 PF00582 Universal stress protein family BD01_RS09430 PF01571 Aminomethyltransferase folate-binding domain BD01_RS09430 PF08669 Glycine cleavage T-protein C-terminal barrel domain BD01_RS09450 PF01950 Fructose-1,6-bisphosphatase BD01_RS09460 PF01593 Flavin containing amine oxidoreductase BD01_RS09465 PF00696 Amino acid kinase family BD01_RS09510 PF01209 ubiE/COQ5 methyltransferase family BD01_RS09530 PF00970 Oxidoreductase FAD-binding domain BD01_RS09530 PF00175 Oxidoreductase NAD-binding domain BD01_RS09530 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BD01_RS09535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BD01_RS09535 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS09535 PF13247 4Fe-4S dicluster domain BD01_RS09560 PF00440 Bacterial regulatory proteins, tetR family BD01_RS09580 PF01883 Iron-sulfur cluster assembly protein BD01_RS09595 PF01861 Branched-chain polyamine synthase A C-terminal domain BD01_RS09605 PF00082 Subtilase family BD01_RS09610 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 BD01_RS09610 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain BD01_RS09615 PF13186 Iron-sulfur cluster-binding domain BD01_RS09615 PF04055 Radical SAM superfamily BD01_RS09630 PF00795 Carbon-nitrogen hydrolase BD01_RS09630 PF00535 Glycosyl transferase family 2 BD01_RS09635 PF06745 KaiC BD01_RS09645 PF04389 Peptidase family M28 BD01_RS09645 PF02225 PA domain BD01_RS09665 PF00795 Carbon-nitrogen hydrolase BD01_RS09715 PF01906 Putative heavy-metal-binding BD01_RS09745 PF01029 NusB family BD01_RS09745 PF01189 16S rRNA methyltransferase RsmB/F BD01_RS09755 PF00924 Mechanosensitive ion channel BD01_RS09780 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system BD01_RS09795 PF03144 Elongation factor Tu domain 2 BD01_RS09795 PF00009 Elongation factor Tu GTP binding domain BD01_RS09795 PF09105 Elongation factor SelB, winged helix BD01_RS09795 PF09107 Elongation factor SelB, winged helix BD01_RS09795 PF09106 Elongation factor SelB, winged helix BD01_RS09815 PF01926 50S ribosome-binding GTPase BD01_RS09815 PF07650 KH domain BD01_RS09820 PF12802 MarR family BD01_RS09820 PF00717 Peptidase S24-like BD01_RS09830 PF01040 UbiA prenyltransferase family BD01_RS09905 PF00266 Aminotransferase class-V BD01_RS09920 PF01336 OB-fold nucleic acid binding domain BD01_RS09920 PF00152 tRNA synthetases class II (D, K and N) BD01_RS09925 PF02347 Glycine cleavage system P-protein BD01_RS09940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BD01_RS09940 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BD01_RS09940 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS09945 PF00037 4Fe-4S binding domain BD01_RS09945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BD01_RS09945 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BD01_RS09960 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BD01_RS09970 PF00374 Nickel-dependent hydrogenase BD01_RS10000 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain BD01_RS10000 PF01137 RNA 3'-terminal phosphate cyclase BD01_RS10025 PF00521 DNA gyrase/topoisomerase IV, subunit A BD01_RS10025 PF14528 LAGLIDADG-like domain BD01_RS10035 PF01039 Carboxyl transferase domain BD01_RS10045 PF02436 Conserved carboxylase domain BD01_RS10045 PF00682 HMGL-like BD01_RS10045 PF00364 Biotin-requiring enzyme BD01_RS10050 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BD01_RS10055 PF00571 CBS domain BD01_RS10055 PF01769 Divalent cation transporter BD01_RS10055 PF03448 MgtE intracellular N domain BD01_RS10060 PF00742 Homoserine dehydrogenase BD01_RS10060 PF03447 Homoserine dehydrogenase, NAD binding domain BD01_RS10060 PF01842 ACT domain BD01_RS10100 PF03725 3' exoribonuclease family, domain 2 BD01_RS10100 PF00575 S1 RNA binding domain BD01_RS10100 PF01138 3' exoribonuclease family, domain 1 BD01_RS10100 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BD01_RS10100 PF00013 KH domain BD01_RS10105 PF00575 S1 RNA binding domain BD01_RS10105 PF01138 3' exoribonuclease family, domain 1 BD01_RS10105 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BD01_RS10105 PF00013 KH domain BD01_RS10105 PF03725 3' exoribonuclease family, domain 2 BD01_RS10110 PF03725 3' exoribonuclease family, domain 2 BD01_RS10110 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BD01_RS10110 PF00013 KH domain BD01_RS10110 PF00575 S1 RNA binding domain BD01_RS10110 PF01138 3' exoribonuclease family, domain 1 BD01_RS10120 PF00227 Proteasome subunit BD01_RS10130 PF01230 HIT domain BD01_RS10180 PF00857 Isochorismatase family BD01_RS10190 PF03061 Thioesterase superfamily BD01_RS10190 PF01008 Initiation factor 2 subunit family BD01_RS10200 PF00005 ABC transporter BD01_RS10210 PF03551 Transcriptional regulator PadR-like family BD01_RS10220 PF00710 Asparaginase, N-terminal BD01_RS10220 PF17763 Glutaminase/Asparaginase C-terminal domain BD01_RS10240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BD01_RS10240 PF00575 S1 RNA binding domain BD01_RS10240 PF03725 3' exoribonuclease family, domain 2 BD01_RS10240 PF00013 KH domain BD01_RS10240 PF01138 3' exoribonuclease family, domain 1 BD01_RS10250 PF07690 Major Facilitator Superfamily BD01_RS10295 PF01189 16S rRNA methyltransferase RsmB/F BD01_RS10295 PF01029 NusB family BD01_RS10300 PF01871 AMMECR1 BD01_RS10305 PF01910 Thiamine-binding protein BD01_RS10330 PF03576 Peptidase family S58 BD01_RS10335 PF00528 Binding-protein-dependent transport system inner membrane component BD01_RS10340 PF08402 TOBE domain BD01_RS10340 PF00005 ABC transporter BD01_RS10345 PF00860 Permease family BD01_RS10370 PF00297 Ribosomal protein L3 BD01_RS10380 PF00276 Ribosomal protein L23 BD01_RS10385 PF03947 Ribosomal Proteins L2, C-terminal domain BD01_RS10385 PF00181 Ribosomal Proteins L2, RNA binding domain BD01_RS10390 PF00203 Ribosomal protein S19 BD01_RS10395 PF00237 Ribosomal protein L22p/L17e BD01_RS10400 PF07650 KH domain BD01_RS10400 PF00189 Ribosomal protein S3, C-terminal domain BD01_RS10405 PF00831 Ribosomal L29 protein BD01_RS10410 PF01253 Translation initiation factor SUI1 BD01_RS10420 PF00366 Ribosomal protein S17 BD01_RS10425 PF00238 Ribosomal protein L14p/L23e BD01_RS10430 PF00467 KOW motif BD01_RS10430 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BD01_RS10440 PF00281 Ribosomal protein L5 BD01_RS10440 PF00673 ribosomal L5P family C-terminus BD01_RS10450 PF00410 Ribosomal protein S8 BD01_RS10455 PF00347 Ribosomal protein L6 BD01_RS10470 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BD01_RS10475 PF00333 Ribosomal protein S5, N-terminal domain BD01_RS10475 PF03719 Ribosomal protein S5, C-terminal domain BD01_RS10480 PF00327 Ribosomal protein L30p/L7e BD01_RS10485 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BD01_RS10520 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system BD01_RS10530 PF16198 tRNA pseudouridylate synthase B C-terminal domain BD01_RS10530 PF01509 TruB family pseudouridylate synthase (N terminal domain) BD01_RS10550 PF00416 Ribosomal protein S13/S18 BD01_RS10555 PF01479 S4 domain BD01_RS10555 PF00163 Ribosomal protein S4/S9 N-terminal domain BD01_RS10560 PF00411 Ribosomal protein S11 BD01_RS10565 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BD01_RS10565 PF01000 RNA polymerase Rpb3/RpoA insert domain BD01_RS10565 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BD01_RS10580 PF00572 Ribosomal protein L13 BD01_RS10585 PF00380 Ribosomal protein S9/S16 BD01_RS10605 PF03952 Enolase, N-terminal domain BD01_RS10605 PF00113 Enolase, C-terminal TIM barrel domain BD01_RS10610 PF00318 Ribosomal protein S2 BD01_RS10625 PF03551 Transcriptional regulator PadR-like family BD01_RS10645 PF01037 Lrp/AsnC ligand binding domain BD01_RS10655 PF00156 Phosphoribosyl transferase domain BD01_RS10670 PF02978 Signal peptide binding domain BD01_RS10670 PF02881 SRP54-type protein, helical bundle domain BD01_RS10670 PF00448 SRP54-type protein, GTPase domain BD01_RS10690 PF01048 Phosphorylase superfamily BD01_RS10695 PF18267 Rubredoxin NAD+ reductase C-terminal domain BD01_RS10695 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BD01_RS10695 PF04324 BFD-like [2Fe-2S] binding domain BD01_RS10695 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD01_RS10720 PF01048 Phosphorylase superfamily BD01_RS10725 PF00291 Pyridoxal-phosphate dependent enzyme BD01_RS10730 PF01875 Memo-like protein BD01_RS10740 PF00288 GHMP kinases N terminal domain BD01_RS10740 PF08544 GHMP kinases C terminal BD01_RS10740 PF10509 Galactokinase galactose-binding signature BD01_RS10755 PF01070 FMN-dependent dehydrogenase BD01_RS10765 PF17770 Ribonuclease J C-terminal domain BD01_RS10765 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BD01_RS10765 PF00753 Metallo-beta-lactamase superfamily BD01_RS10770 PF00348 Polyprenyl synthetase BD01_RS10790 PF13603 Leucyl-tRNA synthetase, Domain 2 BD01_RS10790 PF08264 Anticodon-binding domain of tRNA BD01_RS10790 PF09334 tRNA synthetases class I (M) BD01_RS10790 PF00133 tRNA synthetases class I (I, L, M and V) BD01_RS10815 PF00005 ABC transporter BD01_RS10820 PF00557 Metallopeptidase family M24 BD01_RS10820 PF01321 Creatinase/Prolidase N-terminal domain BD01_RS10860 PF00291 Pyridoxal-phosphate dependent enzyme BD01_RS10885 PF08753 NikR C terminal nickel binding domain BD01_RS10885 PF01402 Ribbon-helix-helix protein, copG family BD01_RS10900 PF09210 Domain of unknown function (DUF1957) BD01_RS10900 PF03065 Glycosyl hydrolase family 57 BD01_RS10910 PF00209 Sodium:neurotransmitter symporter family BD01_RS10915 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BD01_RS10915 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BD01_RS10925 PF00227 Proteasome subunit BD01_RS10930 PF10996 Beta-Casp domain BD01_RS10930 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BD01_RS10930 PF00753 Metallo-beta-lactamase superfamily BD01_RS10940 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BD01_RS11070 PF00528 Binding-protein-dependent transport system inner membrane component BD01_RS11075 PF07728 AAA domain (dynein-related subfamily) BD01_RS11075 PF12102 Domain of unknown function (DUF3578) BD01_RS11100 PF11495 Archaeal transcriptional regulator TrmB BD01_RS11100 PF01978 Sugar-specific transcriptional regulator TrmB BD01_RS11110 PF00154 recA bacterial DNA recombination protein BD01_RS11110 PF03161 LAGLIDADG DNA endonuclease family BD01_RS11145 PF00069 Protein kinase domain BD01_RS11145 PF03793 PASTA domain BD01_RS11150 PF00704 Glycosyl hydrolases family 18 BD01_RS11150 PF00041 Fibronectin type III domain BD01_RS11200 PF05175 Methyltransferase small domain BD01_RS11200 PF08468 Methyltransferase small domain N-terminal