locus-tag	class	description
A3L11_RS00020	PF03437	BtpA family
A3L11_RS00050	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
A3L11_RS00050	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A3L11_RS00050	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A3L11_RS00050	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
A3L11_RS00055	PF04307	LexA-binding, inner membrane-associated putative hydrolase
A3L11_RS00070	PF01121	Dephospho-CoA kinase
A3L11_RS00090	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
A3L11_RS00090	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
A3L11_RS00095	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
A3L11_RS00095	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
A3L11_RS00100	PF08543	Phosphomethylpyrimidine kinase
A3L11_RS00100	PF10120	Thiamine-phosphate synthase
A3L11_RS00140	PF04073	Aminoacyl-tRNA editing domain
A3L11_RS00140	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L11_RS00140	PF03129	Anticodon binding domain
A3L11_RS00145	PF01411	tRNA synthetases class II (A)
A3L11_RS00145	PF02272	DHHA1 domain
A3L11_RS00145	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L11_RS00155	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
A3L11_RS00155	PF01871	AMMECR1
A3L11_RS00175	PF00227	Proteasome subunit
A3L11_RS00180	PF00005	ABC transporter
A3L11_RS00185	PF01032	FecCD transport family
A3L11_RS00195	PF00583	Acetyltransferase (GNAT) family
A3L11_RS00195	PF00814	Glycoprotease family
A3L11_RS00210	PF00155	Aminotransferase class I and II
A3L11_RS00220	PF05496	Holliday junction DNA helicase RuvB P-loop domain
A3L11_RS00220	PF05491	RuvB C-terminal winged helix domain
A3L11_RS00220	PF17864	RuvB AAA lid domain
A3L11_RS00225	PF05496	Holliday junction DNA helicase RuvB P-loop domain
A3L11_RS00225	PF05491	RuvB C-terminal winged helix domain
A3L11_RS00225	PF17864	RuvB AAA lid domain
A3L11_RS00230	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
A3L11_RS00230	PF00306	ATP synthase alpha/beta chain, C terminal domain
A3L11_RS00230	PF02874	ATP synthase alpha/beta family, beta-barrel domain
A3L11_RS00245	PF06463	Molybdenum Cofactor Synthesis C
A3L11_RS00245	PF04055	Radical SAM superfamily
A3L11_RS00255	PF10150	Ribonuclease E/G family
A3L11_RS00275	PF06745	KaiC
A3L11_RS00290	PF14572	Phosphoribosyl synthetase-associated domain
A3L11_RS00290	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
A3L11_RS00315	PF06559	2'-deoxycytidine 5'-triphosphate deaminase (DCD)
A3L11_RS00340	PF01921	tRNA synthetases class I (K)
A3L11_RS00345	PF01979	Amidohydrolase family
A3L11_RS00365	PF01112	Asparaginase
A3L11_RS00370	PF07690	Major Facilitator Superfamily
A3L11_RS00375	PF04055	Radical SAM superfamily
A3L11_RS00375	PF06968	Biotin and Thiamin Synthesis associated domain
A3L11_RS00390	PF07690	Major Facilitator Superfamily
A3L11_RS00395	PF00004	ATPase family associated with various cellular activities (AAA)
A3L11_RS00395	PF17862	AAA+ lid domain
A3L11_RS00395	PF06480	FtsH Extracellular
A3L11_RS00395	PF01434	Peptidase family M41
A3L11_RS00410	PF00953	Glycosyl transferase family 4
A3L11_RS00410	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
A3L11_RS00415	PF13419	Haloacid dehalogenase-like hydrolase
A3L11_RS00425	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
A3L11_RS00430	PF01435	Peptidase family M48
A3L11_RS00465	PF00970	Oxidoreductase FAD-binding domain
A3L11_RS00465	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L11_RS00465	PF00175	Oxidoreductase NAD-binding domain 
A3L11_RS00470	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS00470	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A3L11_RS00470	PF13247	4Fe-4S dicluster domain
A3L11_RS00500	PF01883	Iron-sulfur cluster assembly protein
A3L11_RS00510	PF01861	Branched-chain polyamine synthase A C-terminal domain
A3L11_RS00535	PF06508	Queuosine biosynthesis protein QueC
A3L11_RS00540	PF01180	Dihydroorotate dehydrogenase
A3L11_RS00550	PF01571	Aminomethyltransferase folate-binding domain
A3L11_RS00550	PF08669	Glycine cleavage T-protein C-terminal barrel domain
A3L11_RS00550	PF17806	Sarcosine oxidase A3 domain
A3L11_RS00550	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS00565	PF01266	FAD dependent oxidoreductase
A3L11_RS00575	PF00696	Amino acid kinase family
A3L11_RS00580	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS00580	PF18113	Rubredoxin binding C-terminal domain
A3L11_RS00585	PF01040	UbiA prenyltransferase family
A3L11_RS00595	PF01885	RNA 2'-phosphotransferase, Tpt1 / KptA family
A3L11_RS00615	PF02056	Family 4 glycosyl hydrolase
A3L11_RS00615	PF11975	Family 4 glycosyl hydrolase C-terminal domain
A3L11_RS00625	PF07690	Major Facilitator Superfamily
A3L11_RS00635	PF08544	GHMP kinases C terminal 
A3L11_RS00635	PF10509	Galactokinase galactose-binding signature
A3L11_RS00635	PF00288	GHMP kinases N terminal domain
A3L11_RS00640	PF16350	FAD dependent oxidoreductase central domain
A3L11_RS00640	PF01571	Aminomethyltransferase folate-binding domain
A3L11_RS00640	PF08669	Glycine cleavage T-protein C-terminal barrel domain
A3L11_RS00640	PF01266	FAD dependent oxidoreductase
A3L11_RS00645	PF01571	Aminomethyltransferase folate-binding domain
A3L11_RS00645	PF08669	Glycine cleavage T-protein C-terminal barrel domain
A3L11_RS00645	PF17806	Sarcosine oxidase A3 domain
A3L11_RS00645	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS00650	PF00474	Sodium:solute symporter family
A3L11_RS00675	PF01926	50S ribosome-binding GTPase
A3L11_RS00675	PF09269	Domain of unknown function (DUF1967)
A3L11_RS00675	PF01018	GTP1/OBG
A3L11_RS00680	PF01037	Lrp/AsnC ligand binding domain
A3L11_RS00705	PF00231	ATP synthase
A3L11_RS00710	PF01914	MarC family integral membrane protein
A3L11_RS00715	PF02566	OsmC-like protein
A3L11_RS00720	PF04055	Radical SAM superfamily
A3L11_RS00725	PF07722	Peptidase C26
A3L11_RS00730	PF00155	Aminotransferase class I and II
A3L11_RS00735	PF01008	Initiation factor 2 subunit family
A3L11_RS00750	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
A3L11_RS00750	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
A3L11_RS00755	PF02803	Thiolase, C-terminal domain
A3L11_RS00755	PF00108	Thiolase, N-terminal domain
A3L11_RS00795	PF00850	Histone deacetylase domain
A3L11_RS00830	PF00474	Sodium:solute symporter family
A3L11_RS00860	PF17284	Spermidine synthase tetramerisation domain
A3L11_RS00885	PF00361	Proton-conducting membrane transporter
A3L11_RS00910	PF03334	Na+/H+ antiporter subunit
A3L11_RS00915	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
A3L11_RS00920	PF01899	Na+/H+ ion antiporter subunit
A3L11_RS00925	PF01597	Glycine cleavage H-protein
A3L11_RS00930	PF13439	Glycosyltransferase Family 4
A3L11_RS00935	PF13247	4Fe-4S dicluster domain
A3L11_RS00935	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS00935	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A3L11_RS00940	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L11_RS00940	PF00970	Oxidoreductase FAD-binding domain
A3L11_RS00940	PF00175	Oxidoreductase NAD-binding domain 
A3L11_RS00950	PF08704	tRNA methyltransferase complex GCD14 subunit
A3L11_RS00970	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
A3L11_RS00975	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_RS00980	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_RS00980	PF12911	N-terminal TM domain of oligopeptide transport permease C
A3L11_RS00985	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L11_RS00985	PF00005	ABC transporter
A3L11_RS00990	PF00005	ABC transporter
A3L11_RS00990	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L11_RS01000	PF08459	UvrC Helix-hairpin-helix N-terminal
A3L11_RS01000	PF01541	GIY-YIG catalytic domain
A3L11_RS01000	PF02151	UvrB/uvrC motif
A3L11_RS01010	PF02535	ZIP Zinc transporter
A3L11_RS01025	PF00005	ABC transporter
A3L11_RS01030	PF01381	Helix-turn-helix
A3L11_RS01060	PF00155	Aminotransferase class I and II
A3L11_RS01075	PF00091	Tubulin/FtsZ family, GTPase domain
A3L11_RS01075	PF12327	FtsZ family, C-terminal domain
A3L11_RS01080	PF13614	AAA domain
A3L11_RS01090	PF01467	Cytidylyltransferase-like
A3L11_RS01090	PF00294	pfkB family carbohydrate kinase
A3L11_RS01100	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
A3L11_RS01115	PF01066	CDP-alcohol phosphatidyltransferase
A3L11_RS01115	PF00483	Nucleotidyl transferase
A3L11_RS01140	PF00005	ABC transporter
A3L11_RS01155	PF00293	NUDIX domain
A3L11_RS01155	PF13344	Haloacid dehalogenase-like hydrolase
A3L11_RS01185	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
A3L11_RS01185	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
A3L11_RS01190	PF00265	Thymidine kinase
A3L11_RS01195	PF00291	Pyridoxal-phosphate dependent enzyme
A3L11_RS01225	PF00294	pfkB family carbohydrate kinase
A3L11_RS01230	PF00535	Glycosyl transferase family 2
A3L11_RS01235	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
A3L11_RS01235	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
A3L11_RS01240	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
A3L11_RS01240	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
A3L11_RS01250	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_RS01260	PF03459	TOBE domain
A3L11_RS01260	PF17912	MalK OB fold domain
A3L11_RS01260	PF00005	ABC transporter
A3L11_RS01270	PF13660	Domain of unknown function (DUF4147)
A3L11_RS01270	PF05161	MOFRL family
A3L11_RS01300	PF13380	CoA binding domain
A3L11_RS01330	PF01894	Uncharacterised protein family UPF0047
A3L11_RS01335	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
A3L11_RS01335	PF01926	50S ribosome-binding GTPase
A3L11_RS01355	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_RS01360	PF00005	ABC transporter
A3L11_RS01360	PF08402	TOBE domain
A3L11_RS01365	PF01980	tRNA-methyltransferase O
A3L11_RS01365	PF18389	TrmO C-terminal domain
A3L11_RS01370	PF17863	AAA lid domain
A3L11_RS01370	PF07726	ATPase family associated with various cellular activities (AAA)
A3L11_RS01395	PF00686	Starch binding domain
A3L11_RS01395	PF02806	Alpha amylase, C-terminal all-beta domain
A3L11_RS01395	PF01833	IPT/TIG domain
A3L11_RS01395	PF00128	Alpha amylase, catalytic domain
A3L11_RS01405	PF01523	Putative modulator of DNA gyrase
A3L11_RS01420	PF01523	Putative modulator of DNA gyrase
A3L11_RS01440	PF03600	Citrate transporter
A3L11_RS01455	PF07687	Peptidase dimerisation domain
A3L11_RS01455	PF01546	Peptidase family M20/M25/M40
A3L11_RS01465	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
A3L11_RS01465	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
A3L11_RS01475	PF02558	Ketopantoate reductase PanE/ApbA
A3L11_RS01475	PF08546	Ketopantoate reductase PanE/ApbA C terminal
A3L11_RS01480	PF00588	SpoU rRNA Methylase family
A3L11_RS01485	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
A3L11_RS01485	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
A3L11_RS01515	PF16360	GTP-binding GTPase Middle Region
A3L11_RS01515	PF13167	GTP-binding GTPase N-terminal
A3L11_RS01515	PF01926	50S ribosome-binding GTPase
A3L11_RS01525	PF01384	Phosphate transporter family
A3L11_RS01530	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
A3L11_RS01535	PF00037	4Fe-4S binding domain
A3L11_RS01540	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L11_RS01540	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
A3L11_RS01545	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L11_RS01550	PF00037	4Fe-4S binding domain
A3L11_RS01555	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L11_RS01555	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
A3L11_RS01560	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L11_RS01570	PF12800	4Fe-4S binding domain
A3L11_RS01570	PF13247	4Fe-4S dicluster domain
A3L11_RS01575	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS01575	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A3L11_RS01575	PF13247	4Fe-4S dicluster domain
A3L11_RS01585	PF03063	Prismane/CO dehydrogenase family
A3L11_RS01590	PF12800	4Fe-4S binding domain
A3L11_RS01590	PF13247	4Fe-4S dicluster domain
A3L11_RS01595	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L11_RS01610	PF01032	FecCD transport family
A3L11_RS01615	PF00005	ABC transporter
A3L11_RS01620	PF01883	Iron-sulfur cluster assembly protein
A3L11_RS01620	PF10609	NUBPL iron-transfer P-loop NTPase
A3L11_RS01645	PF00294	pfkB family carbohydrate kinase
A3L11_RS01655	PF00708	Acylphosphatase
A3L11_RS01665	PF01949	Protein of unknown function DUF99
A3L11_RS01670	PF00582	Universal stress protein family
A3L11_RS01675	PF01571	Aminomethyltransferase folate-binding domain
A3L11_RS01675	PF08669	Glycine cleavage T-protein C-terminal barrel domain
A3L11_RS01695	PF08241	Methyltransferase domain
A3L11_RS01740	PF00005	ABC transporter
A3L11_RS01765	PF00696	Amino acid kinase family
A3L11_RS01770	PF01593	Flavin containing amine oxidoreductase
A3L11_RS01790	PF01950	Fructose-1,6-bisphosphatase
A3L11_RS01810	PF13404	AsnC-type helix-turn-helix domain
A3L11_RS01810	PF01037	Lrp/AsnC ligand binding domain
A3L11_RS01815	PF05958	tRNA (Uracil-5-)-methyltransferase
A3L11_RS01825	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L11_RS01830	PF00156	Phosphoribosyl transferase domain
A3L11_RS01845	PF04675	DNA ligase N terminus
A3L11_RS01845	PF01068	ATP dependent DNA ligase domain
A3L11_RS01845	PF04679	ATP dependent DNA ligase C terminal region        
A3L11_RS01865	PF03553	Na+/H+ antiporter family
A3L11_RS01870	PF03167	Uracil DNA glycosylase superfamily
A3L11_RS01880	PF04055	Radical SAM superfamily
A3L11_RS01880	PF06463	Molybdenum Cofactor Synthesis C
A3L11_RS01895	PF03788	LrgA family
A3L11_RS01900	PF04172	LrgB-like family 
A3L11_RS01930	PF00596	Class II Aldolase and Adducin N-terminal domain
A3L11_RS01940	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
A3L11_RS01940	PF12557	Cob(I)alamin adenosyltransferase N terminal 
A3L11_RS01950	PF00176	SNF2 family N-terminal domain
A3L11_RS01950	PF18339	RapA N-terminal Tudor like domain 1
A3L11_RS01950	PF00271	Helicase conserved C-terminal domain
A3L11_RS01950	PF12137	RNA polymerase recycling family C-terminal
A3L11_RS01950	PF18337	RapA N-terminal Tudor like domain
A3L11_RS02015	PF03099	Biotin/lipoate A/B protein ligase family
A3L11_RS02035	PF01244	Membrane dipeptidase (Peptidase family M19)
A3L11_RS02050	PF01555	DNA methylase
A3L11_RS02070	PF00326	Prolyl oligopeptidase family
A3L11_RS02070	PF07676	WD40-like Beta Propeller Repeat
A3L11_RS02095	PF01384	Phosphate transporter family
A3L11_RS02125	PF04055	Radical SAM superfamily
A3L11_RS02125	PF01938	TRAM domain
A3L11_RS02125	PF00919	Uncharacterized protein family UPF0004
A3L11_RS02135	PF02475	Met-10+ like-protein
A3L11_RS02135	PF05958	tRNA (Uracil-5-)-methyltransferase
A3L11_RS02135	PF01938	TRAM domain
A3L11_RS02140	PF01899	Na+/H+ ion antiporter subunit
A3L11_RS02145	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
A3L11_RS02150	PF03334	Na+/H+ antiporter subunit
A3L11_RS02170	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
A3L11_RS02175	PF00361	Proton-conducting membrane transporter
A3L11_RS02185	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A3L11_RS02190	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
A3L11_RS02195	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A3L11_RS02195	PF00374	Nickel-dependent hydrogenase
A3L11_RS02200	PF00146	NADH dehydrogenase
A3L11_RS02205	PF12838	4Fe-4S dicluster domain
A3L11_RS02215	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
A3L11_RS02220	PF03334	Na+/H+ antiporter subunit
A3L11_RS02235	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
A3L11_RS02240	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
A3L11_RS02245	PF00361	Proton-conducting membrane transporter
A3L11_RS02255	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A3L11_RS02260	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A3L11_RS02260	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
A3L11_RS02265	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A3L11_RS02265	PF00374	Nickel-dependent hydrogenase
A3L11_RS02270	PF00146	NADH dehydrogenase
A3L11_RS02275	PF12838	4Fe-4S dicluster domain
A3L11_RS02300	PF05496	Holliday junction DNA helicase RuvB P-loop domain
A3L11_RS02300	PF17864	RuvB AAA lid domain
A3L11_RS02300	PF05491	RuvB C-terminal winged helix domain
A3L11_RS02320	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS02335	PF00202	Aminotransferase class-III
A3L11_RS02350	PF01791	DeoC/LacD family aldolase
A3L11_RS02365	PF00113	Enolase, C-terminal TIM barrel domain
A3L11_RS02365	PF03952	Enolase, N-terminal domain
A3L11_RS02395	PF01037	Lrp/AsnC ligand binding domain
A3L11_RS02395	PF13404	AsnC-type helix-turn-helix domain
A3L11_RS02400	PF01725	Ham1 family
A3L11_RS02420	PF02391	MoaE protein
A3L11_RS02430	PF00899	ThiF family
A3L11_RS02450	PF03176	MMPL family
A3L11_RS02470	PF13636	RNA-binding PUA-like domain of methyltransferase RsmF
A3L11_RS02470	PF01189	16S rRNA methyltransferase RsmB/F
A3L11_RS02470	PF17125	N-terminal domain of 16S rRNA methyltransferase RsmF
A3L11_RS02485	PF01513	ATP-NAD kinase
A3L11_RS02495	PF00814	Glycoprotease family
A3L11_RS02515	PF00294	pfkB family carbohydrate kinase
A3L11_RS02515	PF01467	Cytidylyltransferase-like
A3L11_RS02565	PF00520	Ion transport protein
A3L11_RS02565	PF00027	Cyclic nucleotide-binding domain
A3L11_RS02590	PF01048	Phosphorylase superfamily
A3L11_RS02605	PF01979	Amidohydrolase family
A3L11_RS02610	PF01661	Macro domain
A3L11_RS02610	PF12002	MgsA AAA+ ATPase C terminal
A3L11_RS02610	PF05496	Holliday junction DNA helicase RuvB P-loop domain
A3L11_RS02610	PF16193	AAA C-terminal domain
A3L11_RS02625	PF01256	Carbohydrate kinase
A3L11_RS02625	PF03853	YjeF-related protein N-terminus
A3L11_RS02635	PF00128	Alpha amylase, catalytic domain
A3L11_RS02635	PF02806	Alpha amylase, C-terminal all-beta domain
A3L11_RS02690	PF04055	Radical SAM superfamily
A3L11_RS02690	PF06463	Molybdenum Cofactor Synthesis C
A3L11_RS02700	PF01557	Fumarylacetoacetate (FAA) hydrolase family
A3L11_RS02720	PF10672	S-adenosylmethionine-dependent methyltransferase
A3L11_RS02720	PF02926	THUMP domain
A3L11_RS02720	PF01170	Putative RNA methylase family UPF0020
A3L11_RS02725	PF01926	50S ribosome-binding GTPase
A3L11_RS02745	PF00437	Type II/IV secretion system protein
A3L11_RS02760	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
A3L11_RS02785	PF17863	AAA lid domain
A3L11_RS02785	PF07726	ATPase family associated with various cellular activities (AAA)
A3L11_RS02800	PF00294	pfkB family carbohydrate kinase
A3L11_RS02805	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
A3L11_RS02825	PF01494	FAD binding domain
A3L11_RS02830	PF01470	Pyroglutamyl peptidase
A3L11_RS02855	PF13173	AAA domain
A3L11_RS02855	PF13635	Domain of unknown function (DUF4143)
A3L11_RS02860	PF01171	PP-loop family
A3L11_RS02865	PF13180	PDZ domain
A3L11_RS02870	PF00535	Glycosyl transferase family 2
A3L11_RS02900	PF01925	Sulfite exporter TauE/SafE
A3L11_RS02930	PF01747	ATP-sulfurylase
A3L11_RS02930	PF14306	PUA-like domain
A3L11_RS02940	PF16916	Dimerisation domain of Zinc Transporter
A3L11_RS02940	PF01545	Cation efflux family
A3L11_RS02945	PF00282	Pyridoxal-dependent decarboxylase conserved domain
A3L11_RS02950	PF00999	Sodium/hydrogen exchanger family
A3L11_RS02975	PF09094	Domain of unknown function (DUF1925)
A3L11_RS02975	PF03065	Glycosyl hydrolase family 57
A3L11_RS02975	PF09095	Domain of unknown function (DUF1926)
A3L11_RS02990	PF01171	PP-loop family
A3L11_RS03000	PF00478	IMP dehydrogenase / GMP reductase domain
A3L11_RS03000	PF00571	CBS domain
A3L11_RS03005	PF00999	Sodium/hydrogen exchanger family
A3L11_RS03010	PF00999	Sodium/hydrogen exchanger family
A3L11_RS03020	PF03129	Anticodon binding domain
A3L11_RS03020	PF13393	Histidyl-tRNA synthetase
A3L11_RS03040	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L11_RS03040	PF02272	DHHA1 domain
A3L11_RS03040	PF01411	tRNA synthetases class II (A)
A3L11_RS03050	PF01784	NIF3 (NGG1p interacting factor 3)
A3L11_RS03055	PF16199	Radical_SAM C-terminal domain
A3L11_RS03055	PF04055	Radical SAM superfamily
A3L11_RS03055	PF00583	Acetyltransferase (GNAT) family
A3L11_RS03095	PF06745	KaiC
A3L11_RS03105	PF02675	S-adenosylmethionine decarboxylase 
A3L11_RS03110	PF07549	SecD/SecF GG Motif
A3L11_RS03110	PF02355	Protein export membrane protein
A3L11_RS03120	PF02254	TrkA-N domain
A3L11_RS03120	PF02080	TrkA-C domain
A3L11_RS03130	PF01496	V-type ATPase 116kDa subunit family  
A3L11_RS03140	PF01991	ATP synthase (E/31 kDa) subunit
A3L11_RS03150	PF01990	ATP synthase (F/14-kDa) subunit
A3L11_RS03155	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
A3L11_RS03155	PF02874	ATP synthase alpha/beta family, beta-barrel domain
A3L11_RS03155	PF16886	ATPsynthase alpha/beta subunit N-term extension
A3L11_RS03160	PF02874	ATP synthase alpha/beta family, beta-barrel domain
A3L11_RS03160	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
A3L11_RS03165	PF01813	ATP synthase subunit D 
A3L11_RS03170	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L11_RS03170	PF02272	DHHA1 domain
A3L11_RS03170	PF01411	tRNA synthetases class II (A)
A3L11_RS03190	PF00175	Oxidoreductase NAD-binding domain 
A3L11_RS03190	PF00970	Oxidoreductase FAD-binding domain
A3L11_RS03190	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L11_RS03195	PF01979	Amidohydrolase family
A3L11_RS03205	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_RS03210	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_RS03210	PF12911	N-terminal TM domain of oligopeptide transport permease C
A3L11_RS03215	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L11_RS03215	PF00005	ABC transporter
A3L11_RS03220	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L11_RS03220	PF00005	ABC transporter
A3L11_RS03230	PF02540	NAD synthase
A3L11_RS03240	PF03951	Glutamine synthetase, beta-Grasp domain
A3L11_RS03240	PF00120	Glutamine synthetase, catalytic domain
A3L11_RS03280	PF06745	KaiC
A3L11_RS03300	PF10672	S-adenosylmethionine-dependent methyltransferase
A3L11_RS03300	PF17785	PUA-like domain
A3L11_RS03320	PF01546	Peptidase family M20/M25/M40
A3L11_RS03320	PF07687	Peptidase dimerisation domain
A3L11_RS03330	PF03169	OPT oligopeptide transporter protein
A3L11_RS03335	PF12706	Beta-lactamase superfamily domain
A3L11_RS03335	PF00753	Metallo-beta-lactamase superfamily
A3L11_RS03340	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
A3L11_RS03340	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
A3L11_RS03340	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A3L11_RS03340	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A3L11_RS03350	PF17912	MalK OB fold domain
A3L11_RS03350	PF00005	ABC transporter
A3L11_RS03350	PF03459	TOBE domain
A3L11_RS03360	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_RS03365	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_RS03375	PF16657	Maltogenic Amylase, C-terminal domain
A3L11_RS03375	PF02903	Alpha amylase, N-terminal ig-like domain
A3L11_RS03375	PF00128	Alpha amylase, catalytic domain
A3L11_RS03380	PF11495	Archaeal transcriptional regulator TrmB
A3L11_RS03380	PF01978	Sugar-specific transcriptional regulator TrmB
A3L11_RS03385	PF00534	Glycosyl transferases group 1
A3L11_RS03385	PF08323	Starch synthase catalytic domain
A3L11_RS03415	PF00133	tRNA synthetases class I (I, L, M and V)
A3L11_RS03415	PF08264	Anticodon-binding domain of tRNA
A3L11_RS03430	PF00892	EamA-like transporter family
A3L11_RS03460	PF00156	Phosphoribosyl transferase domain
A3L11_RS03470	PF02867	Ribonucleotide reductase, barrel domain
A3L11_RS03470	PF03477	ATP cone domain
A3L11_RS03470	PF00317	Ribonucleotide reductase, all-alpha domain
A3L11_RS03480	PF13344	Haloacid dehalogenase-like hydrolase
A3L11_RS03495	PF13579	Glycosyl transferase 4-like domain
A3L11_RS03495	PF00534	Glycosyl transferases group 1
A3L11_RS03500	PF00535	Glycosyl transferase family 2
A3L11_RS03505	PF00534	Glycosyl transferases group 1
A3L11_RS03505	PF13439	Glycosyltransferase Family 4
A3L11_RS03530	PF00483	Nucleotidyl transferase
A3L11_RS03545	PF01370	NAD dependent epimerase/dehydratase family
A3L11_RS03570	PF17863	AAA lid domain
A3L11_RS03570	PF07726	ATPase family associated with various cellular activities (AAA)
A3L11_RS03610	PF00483	Nucleotidyl transferase
A3L11_RS03615	PF16363	GDP-mannose 4,6 dehydratase
A3L11_RS03630	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
A3L11_RS03635	PF04321	RmlD substrate binding domain
A3L11_RS03655	PF01676	Metalloenzyme superfamily
A3L11_RS03655	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
A3L11_RS03665	PF00535	Glycosyl transferase family 2
A3L11_RS03675	PF00535	Glycosyl transferase family 2
A3L11_RS03690	PF00535	Glycosyl transferase family 2
A3L11_RS03740	PF00118	TCP-1/cpn60 chaperonin family
A3L11_RS03770	PF00571	CBS domain
A3L11_RS03770	PF00478	IMP dehydrogenase / GMP reductase domain
A3L11_RS03780	PF02910	Fumarate reductase flavoprotein C-term
A3L11_RS03780	PF00890	FAD binding domain
A3L11_RS03785	PF02445	Quinolinate synthetase A protein
A3L11_RS03795	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
A3L11_RS03795	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
A3L11_RS03800	PF01680	SOR/SNZ family
A3L11_RS03805	PF01174	SNO glutamine amidotransferase family
A3L11_RS03810	PF01568	Molydopterin dinucleotide binding domain
A3L11_RS03810	PF00384	Molybdopterin oxidoreductase
A3L11_RS03810	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
A3L11_RS03815	PF00156	Phosphoribosyl transferase domain
A3L11_RS03820	PF01259	SAICAR synthetase
A3L11_RS03825	PF02769	AIR synthase related protein, C-terminal domain
A3L11_RS03825	PF00586	AIR synthase related protein, N-terminal domain
A3L11_RS03830	PF02222	ATP-grasp domain
A3L11_RS03835	PF00731	AIR carboxylase
A3L11_RS03840	PF02844	Phosphoribosylglycinamide synthetase, N domain
A3L11_RS03840	PF02843	Phosphoribosylglycinamide synthetase, C domain
A3L11_RS03840	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
A3L11_RS03860	PF00586	AIR synthase related protein, N-terminal domain
A3L11_RS03860	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
A3L11_RS03860	PF02769	AIR synthase related protein, C-terminal domain
A3L11_RS03870	PF00117	Glutamine amidotransferase class-I
A3L11_RS03870	PF00958	GMP synthase C terminal domain
A3L11_RS03870	PF02568	Thiamine biosynthesis protein (ThiI)
A3L11_RS03885	PF00117	Glutamine amidotransferase class-I
A3L11_RS03885	PF00958	GMP synthase C terminal domain
A3L11_RS03885	PF02540	NAD synthase
A3L11_RS03950	PF13847	Methyltransferase domain
A3L11_RS03950	PF17827	PrmC N-terminal domain
A3L11_RS03975	PF00575	S1 RNA binding domain
A3L11_RS03980	PF00719	Inorganic pyrophosphatase
A3L11_RS04040	PF00535	Glycosyl transferase family 2
A3L11_RS04045	PF04389	Peptidase family M28
A3L11_RS04045	PF02225	PA domain
A3L11_RS04060	PF00795	Carbon-nitrogen hydrolase
A3L11_RS04120	PF01906	Putative heavy-metal-binding
A3L11_RS04155	PF01189	16S rRNA methyltransferase RsmB/F
A3L11_RS04155	PF01029	NusB family
A3L11_RS04160	PF00924	Mechanosensitive ion channel
A3L11_RS04205	PF09105	Elongation factor SelB, winged helix 
A3L11_RS04205	PF09106	Elongation factor SelB, winged helix 
A3L11_RS04205	PF09107	Elongation factor SelB, winged helix 
A3L11_RS04205	PF03144	Elongation factor Tu domain 2
A3L11_RS04205	PF00009	Elongation factor Tu GTP binding domain
A3L11_RS04230	PF01926	50S ribosome-binding GTPase
A3L11_RS04235	PF12802	MarR family
A3L11_RS04235	PF00717	Peptidase S24-like
A3L11_RS04245	PF01040	UbiA prenyltransferase family
A3L11_RS04290	PF00860	Permease family
A3L11_RS04295	PF08402	TOBE domain
A3L11_RS04295	PF00005	ABC transporter
A3L11_RS04300	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_RS04305	PF03576	Peptidase family S58 
A3L11_RS04325	PF01910	Thiamine-binding protein
A3L11_RS04330	PF01871	AMMECR1
A3L11_RS04345	PF01189	16S rRNA methyltransferase RsmB/F
A3L11_RS04345	PF01029	NusB family
A3L11_RS04365	PF00136	DNA polymerase family B
A3L11_RS04365	PF03104	DNA polymerase family B, exonuclease domain
A3L11_RS04375	PF01850	PIN domain
A3L11_RS04405	PF07690	Major Facilitator Superfamily
A3L11_RS04410	PF00575	S1 RNA binding domain
A3L11_RS04410	PF03725	3' exoribonuclease family, domain 2
A3L11_RS04410	PF01138	3' exoribonuclease family, domain 1
A3L11_RS04410	PF00013	KH domain
A3L11_RS04410	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
A3L11_RS04435	PF03551	Transcriptional regulator PadR-like family
A3L11_RS04440	PF01008	Initiation factor 2 subunit family
A3L11_RS04440	PF03061	Thioesterase superfamily
A3L11_RS04450	PF00857	Isochorismatase family
A3L11_RS04490	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L11_RS04520	PF01230	HIT domain
A3L11_RS04530	PF00227	Proteasome subunit
A3L11_RS04540	PF01138	3' exoribonuclease family, domain 1
A3L11_RS04540	PF03725	3' exoribonuclease family, domain 2
A3L11_RS04540	PF00575	S1 RNA binding domain
A3L11_RS04540	PF00013	KH domain
A3L11_RS04540	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
A3L11_RS04545	PF01138	3' exoribonuclease family, domain 1
A3L11_RS04545	PF03725	3' exoribonuclease family, domain 2
A3L11_RS04545	PF00575	S1 RNA binding domain
A3L11_RS04545	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
A3L11_RS04545	PF00013	KH domain
A3L11_RS04550	PF00013	KH domain
A3L11_RS04550	PF01138	3' exoribonuclease family, domain 1
A3L11_RS04550	PF00575	S1 RNA binding domain
A3L11_RS04550	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
A3L11_RS04580	PF01842	ACT domain
A3L11_RS04580	PF03447	Homoserine dehydrogenase, NAD binding domain
A3L11_RS04580	PF00742	Homoserine dehydrogenase
A3L11_RS04585	PF01380	SIS domain
A3L11_RS04585	PF00571	CBS domain
A3L11_RS04590	PF03977	Na+-transporting oxaloacetate decarboxylase beta subunit
A3L11_RS04595	PF02436	Conserved carboxylase domain
A3L11_RS04595	PF00364	Biotin-requiring enzyme
A3L11_RS04595	PF00682	HMGL-like
A3L11_RS04605	PF01039	Carboxyl transferase domain
A3L11_RS04615	PF14528	LAGLIDADG-like domain
A3L11_RS04615	PF03796	DnaB-like helicase C terminal domain
A3L11_RS04615	PF00772	DnaB-like helicase N terminal domain
A3L11_RS04640	PF01137	RNA 3'-terminal phosphate cyclase
A3L11_RS04640	PF05189	RNA 3'-terminal phosphate cyclase (RTC), insert domain
A3L11_RS04675	PF00374	Nickel-dependent hydrogenase
A3L11_RS04685	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L11_RS04700	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A3L11_RS04700	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
A3L11_RS04700	PF00037	4Fe-4S binding domain
A3L11_RS04705	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A3L11_RS04705	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS04705	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A3L11_RS04715	PF00266	Aminotransferase class-V
A3L11_RS04720	PF00152	tRNA synthetases class II (D, K and N) 
A3L11_RS04720	PF01336	OB-fold nucleic acid binding domain
A3L11_RS04735	PF00266	Aminotransferase class-V
A3L11_RS04780	PF00297	Ribosomal protein L3
A3L11_RS04790	PF00276	Ribosomal protein L23
A3L11_RS04795	PF00181	Ribosomal Proteins L2, RNA binding domain
A3L11_RS04795	PF03947	Ribosomal Proteins L2, C-terminal domain
A3L11_RS04800	PF00203	Ribosomal protein S19
A3L11_RS04805	PF00237	Ribosomal protein L22p/L17e
A3L11_RS04810	PF07650	KH domain
A3L11_RS04810	PF00189	Ribosomal protein S3, C-terminal domain
A3L11_RS04815	PF00831	Ribosomal L29 protein
A3L11_RS04820	PF01253	Translation initiation factor SUI1
A3L11_RS04830	PF00366	Ribosomal protein S17
A3L11_RS04835	PF00238	Ribosomal protein L14p/L23e
A3L11_RS04840	PF00467	KOW motif
A3L11_RS04840	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
A3L11_RS04850	PF00281	Ribosomal protein L5
A3L11_RS04850	PF00673	ribosomal L5P family C-terminus
A3L11_RS04860	PF00410	Ribosomal protein S8
A3L11_RS04865	PF00347	Ribosomal protein L6
A3L11_RS04880	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
A3L11_RS04885	PF03719	Ribosomal protein S5, C-terminal domain
A3L11_RS04885	PF00333	Ribosomal protein S5, N-terminal domain
A3L11_RS04890	PF00327	Ribosomal protein L30p/L7e
A3L11_RS04895	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
A3L11_RS04935	PF16198	tRNA pseudouridylate synthase B C-terminal domain
A3L11_RS04935	PF01509	TruB family pseudouridylate synthase (N terminal domain)
A3L11_RS04940	PF05175	Methyltransferase small domain
A3L11_RS04950	PF00416	Ribosomal protein S13/S18
A3L11_RS04955	PF01479	S4 domain
A3L11_RS04955	PF00163	Ribosomal protein S4/S9 N-terminal domain
A3L11_RS04960	PF00411	Ribosomal protein S11
A3L11_RS04965	PF01000	RNA polymerase Rpb3/RpoA insert domain
A3L11_RS04965	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
A3L11_RS04965	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
A3L11_RS04980	PF00572	Ribosomal protein L13
A3L11_RS04985	PF00380	Ribosomal protein S9/S16
A3L11_RS05005	PF03952	Enolase, N-terminal domain
A3L11_RS05005	PF00113	Enolase, C-terminal TIM barrel domain
A3L11_RS05010	PF00318	Ribosomal protein S2
A3L11_RS05045	PF01037	Lrp/AsnC ligand binding domain
A3L11_RS05055	PF00156	Phosphoribosyl transferase domain
A3L11_RS05070	PF02978	Signal peptide binding domain
A3L11_RS05070	PF00448	SRP54-type protein, GTPase domain
A3L11_RS05070	PF02881	SRP54-type protein, helical bundle domain
A3L11_RS05085	PF01048	Phosphorylase superfamily
A3L11_RS05090	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS05090	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A3L11_RS05105	PF01048	Phosphorylase superfamily
A3L11_RS05110	PF00291	Pyridoxal-phosphate dependent enzyme
A3L11_RS05115	PF01875	Memo-like protein
A3L11_RS05125	PF10509	Galactokinase galactose-binding signature
A3L11_RS05125	PF08544	GHMP kinases C terminal 
A3L11_RS05125	PF00288	GHMP kinases N terminal domain
A3L11_RS05135	PF04324	BFD-like [2Fe-2S] binding domain
A3L11_RS05135	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS05135	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
A3L11_RS05135	PF18267	Rubredoxin NAD+ reductase C-terminal domain
A3L11_RS05145	PF13247	4Fe-4S dicluster domain
A3L11_RS05150	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L11_RS05150	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
A3L11_RS05155	PF01070	FMN-dependent dehydrogenase
A3L11_RS05165	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
A3L11_RS05165	PF17770	Ribonuclease J C-terminal domain
A3L11_RS05165	PF00753	Metallo-beta-lactamase superfamily
A3L11_RS05170	PF00348	Polyprenyl synthetase
A3L11_RS05175	PF07690	Major Facilitator Superfamily
A3L11_RS05190	PF09334	tRNA synthetases class I (M)
A3L11_RS05190	PF13603	Leucyl-tRNA synthetase, Domain 2
A3L11_RS05190	PF00133	tRNA synthetases class I (I, L, M and V)
A3L11_RS05190	PF08264	Anticodon-binding domain of tRNA
A3L11_RS05200	PF07969	Amidohydrolase family
A3L11_RS05205	PF00557	Metallopeptidase family M24
A3L11_RS05205	PF01321	Creatinase/Prolidase N-terminal domain
A3L11_RS05250	PF01402	Ribbon-helix-helix protein, copG family
A3L11_RS05250	PF08753	NikR C terminal nickel binding domain
A3L11_RS05265	PF09210	Domain of unknown function (DUF1957)
A3L11_RS05265	PF03065	Glycosyl hydrolase family 57
A3L11_RS05270	PF00543	Nitrogen regulatory protein P-II
A3L11_RS05280	PF00209	Sodium:neurotransmitter symporter family
A3L11_RS05285	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A3L11_RS05285	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
A3L11_RS05300	PF00227	Proteasome subunit
A3L11_RS05305	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
A3L11_RS05305	PF10996	Beta-Casp domain
A3L11_RS05305	PF00753	Metallo-beta-lactamase superfamily
A3L11_RS05310	PF00291	Pyridoxal-phosphate dependent enzyme
A3L11_RS05320	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
A3L11_RS05340	PF01554	MatE
A3L11_RS05355	PF02896	PEP-utilising enzyme, TIM barrel domain
A3L11_RS05355	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
A3L11_RS05355	PF00391	PEP-utilising enzyme, mobile domain
A3L11_RS05380	PF00082	Subtilase family
A3L11_RS05395	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A3L11_RS05395	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS05405	PF01018	GTP1/OBG
A3L11_RS05405	PF01926	50S ribosome-binding GTPase
A3L11_RS05405	PF04055	Radical SAM superfamily
A3L11_RS05415	PF01513	ATP-NAD kinase
A3L11_RS05425	PF00266	Aminotransferase class-V
A3L11_RS05435	PF02769	AIR synthase related protein, C-terminal domain
A3L11_RS05435	PF00586	AIR synthase related protein, N-terminal domain
A3L11_RS05440	PF00708	Acylphosphatase
A3L11_RS05440	PF07503	HypF finger
A3L11_RS05440	PF01300	Telomere recombination
A3L11_RS05440	PF17788	HypF Kae1-like domain
A3L11_RS05445	PF01924	Hydrogenase formation hypA family
A3L11_RS05450	PF01455	HupF/HypC family
A3L11_RS05455	PF12804	MobA-like NTP transferase domain
A3L11_RS05470	PF10609	NUBPL iron-transfer P-loop NTPase
A3L11_RS05480	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L11_RS05480	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
A3L11_RS05495	PF04055	Radical SAM superfamily
A3L11_RS05495	PF13186	Iron-sulfur cluster-binding domain
A3L11_RS05515	PF00005	ABC transporter
A3L11_RS05520	PF14528	LAGLIDADG-like domain
A3L11_RS05520	PF01458	Uncharacterized protein family (UPF0051)
A3L11_RS05525	PF00005	ABC transporter
A3L11_RS05575	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
A3L11_RS05575	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS05595	PF05547	Immune inhibitor A peptidase M6
A3L11_RS05595	PF00801	PKD domain
A3L11_RS05600	PF12706	Beta-lactamase superfamily domain
A3L11_RS05600	PF00753	Metallo-beta-lactamase superfamily
A3L11_RS05620	PF06560	Glucose-6-phosphate isomerase (GPI)
A3L11_RS05630	PF00483	Nucleotidyl transferase
A3L11_RS05630	PF01050	Mannose-6-phosphate isomerase
A3L11_RS05640	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A3L11_RS05640	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
A3L11_RS05640	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
A3L11_RS05640	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A3L11_RS05655	PF01138	3' exoribonuclease family, domain 1
A3L11_RS05655	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
A3L11_RS05655	PF00575	S1 RNA binding domain
A3L11_RS05655	PF00013	KH domain
A3L11_RS05655	PF03725	3' exoribonuclease family, domain 2
A3L11_RS05690	PF00155	Aminotransferase class I and II
A3L11_RS05715	PF01676	Metalloenzyme superfamily
A3L11_RS05715	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
A3L11_RS05720	PF00732	GMC oxidoreductase
A3L11_RS05720	PF05199	GMC oxidoreductase
A3L11_RS05725	PF00177	Ribosomal protein S7p/S5e
A3L11_RS05745	PF04997	RNA polymerase Rpb1, domain 1
A3L11_RS05745	PF04998	RNA polymerase Rpb1, domain 5
A3L11_RS05745	PF05000	RNA polymerase Rpb1, domain 4
A3L11_RS05745	PF04983	RNA polymerase Rpb1, domain 3
A3L11_RS05745	PF00623	RNA polymerase Rpb1, domain 2
A3L11_RS05750	PF05000	RNA polymerase Rpb1, domain 4
A3L11_RS05750	PF00623	RNA polymerase Rpb1, domain 2
A3L11_RS05750	PF04983	RNA polymerase Rpb1, domain 3
A3L11_RS05750	PF04998	RNA polymerase Rpb1, domain 5
A3L11_RS05750	PF04997	RNA polymerase Rpb1, domain 1
A3L11_RS05755	PF04563	RNA polymerase beta subunit
A3L11_RS05755	PF10385	RNA polymerase beta subunit external 1 domain
A3L11_RS05755	PF04560	RNA polymerase Rpb2, domain 7
A3L11_RS05755	PF04561	RNA polymerase Rpb2, domain 2
A3L11_RS05755	PF04565	RNA polymerase Rpb2, domain 3
A3L11_RS05755	PF00562	RNA polymerase Rpb2, domain 6
A3L11_RS05785	PF02347	Glycine cleavage system P-protein
A3L11_RS05790	PF02347	Glycine cleavage system P-protein
A3L11_RS05845	PF04324	BFD-like [2Fe-2S] binding domain
A3L11_RS05845	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS05850	PF01266	FAD dependent oxidoreductase
A3L11_RS05855	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
A3L11_RS05855	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
A3L11_RS05870	PF03009	Glycerophosphoryl diester phosphodiesterase family
A3L11_RS05875	PF03009	Glycerophosphoryl diester phosphodiesterase family
A3L11_RS05885	PF00083	Sugar (and other) transporter
A3L11_RS05890	PF12697	Alpha/beta hydrolase family
A3L11_RS05905	PF00005	ABC transporter
A3L11_RS05915	PF02223	Thymidylate kinase
A3L11_RS05925	PF00483	Nucleotidyl transferase
A3L11_RS05930	PF00821	Phosphoenolpyruvate carboxykinase C-terminal P-loop domain
A3L11_RS05930	PF17297	Phosphoenolpyruvate carboxykinase N-terminal domain
A3L11_RS05935	PF00343	Carbohydrate phosphorylase
A3L11_RS05935	PF11897	Protein of unknown function (DUF3417)
A3L11_RS05945	PF00749	tRNA synthetases class I (E and Q), catalytic domain
A3L11_RS05945	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
A3L11_RS05970	PF00692	dUTPase
A3L11_RS05990	PF00687	Ribosomal protein L1p/L10e family
A3L11_RS05995	PF00298	Ribosomal protein L11, RNA binding domain
A3L11_RS05995	PF03946	Ribosomal protein L11, N-terminal domain
A3L11_RS06010	PF12327	FtsZ family, C-terminal domain
A3L11_RS06010	PF00091	Tubulin/FtsZ family, GTPase domain
A3L11_RS06020	PF16868	NMT1-like family
A3L11_RS06045	PF08745	PINc domain ribonuclease
A3L11_RS06060	PF01396	Topoisomerase DNA binding C4 zinc finger
A3L11_RS06060	PF01131	DNA topoisomerase
A3L11_RS06060	PF01751	Toprim domain
A3L11_RS06065	PF01494	FAD binding domain
A3L11_RS06080	PF13192	Thioredoxin domain
A3L11_RS06080	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS06090	PF09827	CRISPR associated protein Cas2
A3L11_RS06120	PF18395	Cas3 C-terminal domain
A3L11_RS06120	PF00270	DEAD/DEAH box helicase
A3L11_RS06120	PF18019	HD domain
A3L11_RS06145	PF01867	CRISPR associated protein Cas1
A3L11_RS06165	PF18019	HD domain
A3L11_RS06165	PF00270	DEAD/DEAH box helicase
A3L11_RS06165	PF18395	Cas3 C-terminal domain
A3L11_RS06195	PF13607	Succinyl-CoA ligase like flavodoxin domain
A3L11_RS06195	PF13380	CoA binding domain
A3L11_RS06215	PF01131	DNA topoisomerase
A3L11_RS06215	PF00270	DEAD/DEAH box helicase
A3L11_RS06215	PF01751	Toprim domain
A3L11_RS06215	PF17915	Reverse gyrase zinc finger
A3L11_RS06255	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
A3L11_RS06265	PF13419	Haloacid dehalogenase-like hydrolase
A3L11_RS06280	PF01966	HD domain
A3L11_RS06290	PF00152	tRNA synthetases class II (D, K and N) 
A3L11_RS06290	PF01336	OB-fold nucleic acid binding domain
A3L11_RS06305	PF01142	tRNA pseudouridine synthase D (TruD)
A3L11_RS06320	PF07687	Peptidase dimerisation domain
A3L11_RS06320	PF01546	Peptidase family M20/M25/M40
A3L11_RS06390	PF06418	CTP synthase N-terminus
A3L11_RS06390	PF00117	Glutamine amidotransferase class-I
A3L11_RS06410	PF01926	50S ribosome-binding GTPase
A3L11_RS06410	PF09269	Domain of unknown function (DUF1967)
A3L11_RS06410	PF01018	GTP1/OBG
A3L11_RS06415	PF12706	Beta-lactamase superfamily domain
A3L11_RS06425	PF00483	Nucleotidyl transferase
A3L11_RS06430	PF00571	CBS domain
A3L11_RS06430	PF00478	IMP dehydrogenase / GMP reductase domain
A3L11_RS06440	PF00557	Metallopeptidase family M24
A3L11_RS06445	PF02386	Cation transport protein
A3L11_RS06450	PF00005	ABC transporter
A3L11_RS06475	PF05343	M42 glutamyl aminopeptidase
A3L11_RS06490	PF00132	Bacterial transferase hexapeptide (six repeats)
A3L11_RS06495	PF01255	Putative undecaprenyl diphosphate synthase
A3L11_RS06510	PF03129	Anticodon binding domain
A3L11_RS06510	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L11_RS06510	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L11_RS06560	PF01343	Peptidase family S49
A3L11_RS06570	PF01594	AI-2E family transporter
A3L11_RS06575	PF00809	Pterin binding enzyme
A3L11_RS06595	PF00005	ABC transporter
A3L11_RS06600	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
A3L11_RS06605	PF17757	UvrB interaction domain
A3L11_RS06605	PF04851	Type III restriction enzyme, res subunit
A3L11_RS06605	PF02151	UvrB/uvrC motif
A3L11_RS06605	PF12344	Ultra-violet resistance protein B
A3L11_RS06605	PF00271	Helicase conserved C-terminal domain
A3L11_RS06610	PF01416	tRNA pseudouridine synthase
A3L11_RS06615	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
A3L11_RS06615	PF03484	tRNA synthetase B5 domain
A3L11_RS06620	PF01409	tRNA synthetases class II core domain (F)
A3L11_RS06640	PF03683	Uncharacterised protein family (UPF0175)
A3L11_RS06645	PF08240	Alcohol dehydrogenase GroES-like domain
A3L11_RS06645	PF00107	Zinc-binding dehydrogenase
A3L11_RS06650	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L11_RS06660	PF02934	GatB/GatE catalytic domain
A3L11_RS06660	PF02637	GatB domain
A3L11_RS06665	PF17763	Glutaminase/Asparaginase C-terminal domain
A3L11_RS06665	PF00710	Asparaginase, N-terminal
A3L11_RS06695	PF00398	Ribosomal RNA adenine dimethylase
A3L11_RS06705	PF04055	Radical SAM superfamily
A3L11_RS06705	PF01938	TRAM domain
A3L11_RS06705	PF00919	Uncharacterized protein family UPF0004
A3L11_RS06730	PF01522	Polysaccharide deacetylase
A3L11_RS06745	PF02769	AIR synthase related protein, C-terminal domain
A3L11_RS06745	PF00586	AIR synthase related protein, N-terminal domain
A3L11_RS06750	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
A3L11_RS06750	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
A3L11_RS06760	PF00654	Voltage gated chloride channel
A3L11_RS06775	PF00999	Sodium/hydrogen exchanger family
A3L11_RS06790	PF00491	Arginase family
A3L11_RS06810	PF16653	Saccharopine dehydrogenase C-terminal domain
A3L11_RS06810	PF03435	Saccharopine dehydrogenase NADP binding domain
A3L11_RS06825	PF17125	N-terminal domain of 16S rRNA methyltransferase RsmF
A3L11_RS06825	PF13636	RNA-binding PUA-like domain of methyltransferase RsmF
A3L11_RS06825	PF01189	16S rRNA methyltransferase RsmB/F
A3L11_RS06850	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
A3L11_RS06850	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
A3L11_RS06865	PF02511	Thymidylate synthase complementing protein
A3L11_RS06875	PF01230	HIT domain
A3L11_RS06880	PF01699	Sodium/calcium exchanger protein
A3L11_RS06885	PF01676	Metalloenzyme superfamily
A3L11_RS06885	PF10143	2,3-bisphosphoglycerate-independent phosphoglycerate mutase
A3L11_RS06890	PF03167	Uracil DNA glycosylase superfamily
A3L11_RS06905	PF00248	Aldo/keto reductase family
A3L11_RS06920	PF09334	tRNA synthetases class I (M)
A3L11_RS06920	PF01588	Putative tRNA binding domain
A3L11_RS06920	PF00133	tRNA synthetases class I (I, L, M and V)
A3L11_RS06940	PF01281	Ribosomal protein L9, N-terminal domain
A3L11_RS06940	PF03948	Ribosomal protein L9, C-terminal domain
A3L11_RS06940	PF02272	DHHA1 domain
A3L11_RS06940	PF01368	DHH family
A3L11_RS06995	PF04055	Radical SAM superfamily
A3L11_RS07000	PF01434	Peptidase family M41
A3L11_RS07000	PF00004	ATPase family associated with various cellular activities (AAA)
A3L11_RS07000	PF17862	AAA+ lid domain
A3L11_RS07000	PF06480	FtsH Extracellular
A3L11_RS07040	PF01161	Phosphatidylethanolamine-binding protein
A3L11_RS07080	PF00202	Aminotransferase class-III
A3L11_RS07085	PF00860	Permease family
A3L11_RS07105	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A3L11_RS07110	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
A3L11_RS07115	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A3L11_RS07125	PF00361	Proton-conducting membrane transporter
A3L11_RS07130	PF00361	Proton-conducting membrane transporter
A3L11_RS07135	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
A3L11_RS07140	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
A3L11_RS07140	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
A3L11_RS07140	PF00361	Proton-conducting membrane transporter
A3L11_RS07140	PF13244	Domain of unknown function (DUF4040)
A3L11_RS07150	PF03334	Na+/H+ antiporter subunit
A3L11_RS07155	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
A3L11_RS07160	PF01899	Na+/H+ ion antiporter subunit
A3L11_RS07170	PF06463	Molybdenum Cofactor Synthesis C
A3L11_RS07170	PF04055	Radical SAM superfamily
A3L11_RS07190	PF02350	UDP-N-acetylglucosamine 2-epimerase
A3L11_RS07195	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
A3L11_RS07195	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
A3L11_RS07195	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
A3L11_RS07215	PF03485	Arginyl tRNA synthetase N terminal domain
A3L11_RS07215	PF05746	DALR anticodon binding domain
A3L11_RS07215	PF00750	tRNA synthetases class I (R)
A3L11_RS07225	PF00701	Dihydrodipicolinate synthetase family
A3L11_RS07295	PF00312	Ribosomal protein S15
A3L11_RS07315	PF02568	Thiamine biosynthesis protein (ThiI)
A3L11_RS07315	PF02926	THUMP domain
A3L11_RS07320	PF01940	Integral membrane protein DUF92
A3L11_RS07325	PF01037	Lrp/AsnC ligand binding domain
A3L11_RS07325	PF13404	AsnC-type helix-turn-helix domain
A3L11_RS07330	PF03819	MazG nucleotide pyrophosphohydrolase domain
A3L11_RS07335	PF01022	Bacterial regulatory protein, arsR family
A3L11_RS07345	PF01042	Endoribonuclease L-PSP
A3L11_RS07355	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
A3L11_RS07355	PF00004	ATPase family associated with various cellular activities (AAA)
A3L11_RS07355	PF05362	Lon protease (S16) C-terminal proteolytic domain
A3L11_RS07360	PF00005	ABC transporter
A3L11_RS07365	PF01458	Uncharacterized protein family (UPF0051)
A3L11_RS07380	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A3L11_RS07385	PF00175	Oxidoreductase NAD-binding domain 
A3L11_RS07385	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L11_RS07400	PF00005	ABC transporter
A3L11_RS07415	PF01497	Periplasmic binding protein
A3L11_RS07425	PF01381	Helix-turn-helix
A3L11_RS07460	PF04493	Endonuclease V
A3L11_RS07470	PF01941	S-adenosylmethionine synthetase (AdoMet synthetase)
A3L11_RS07480	PF01202	Shikimate kinase
A3L11_RS07490	PF00155	Aminotransferase class I and II
A3L11_RS07505	PF02543	Carbamoyltransferase N-terminus
A3L11_RS07505	PF16861	Carbamoyltransferase C-terminus
A3L11_RS07515	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L11_RS07515	PF09180	Prolyl-tRNA synthetase, C-terminal
A3L11_RS07515	PF03129	Anticodon binding domain
A3L11_RS07520	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
A3L11_RS07520	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
A3L11_RS07525	PF05343	M42 glutamyl aminopeptidase
A3L11_RS07530	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
A3L11_RS07540	PF01925	Sulfite exporter TauE/SafE
A3L11_RS07550	PF01925	Sulfite exporter TauE/SafE
A3L11_RS07570	PF09334	tRNA synthetases class I (M)
A3L11_RS07570	PF08264	Anticodon-binding domain of tRNA
A3L11_RS07570	PF01588	Putative tRNA binding domain
A3L11_RS07620	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L11_RS07625	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L11_RS07625	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
A3L11_RS07625	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
A3L11_RS07645	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L11_RS07650	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
A3L11_RS07650	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
A3L11_RS07650	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L11_RS07665	PF01975	Survival protein SurE
A3L11_RS07670	PF00448	SRP54-type protein, GTPase domain
A3L11_RS07670	PF02881	SRP54-type protein, helical bundle domain
A3L11_RS07670	PF02978	Signal peptide binding domain
A3L11_RS07685	PF02608	ABC transporter substrate-binding protein PnrA-like
A3L11_RS07690	PF00005	ABC transporter
A3L11_RS07695	PF02653	Branched-chain amino acid transport system / permease component
A3L11_RS07700	PF02653	Branched-chain amino acid transport system / permease component
A3L11_RS07715	PF00156	Phosphoribosyl transferase domain
A3L11_RS07720	PF01406	tRNA synthetases class I (C) catalytic domain
A3L11_RS07720	PF09190	DALR domain
A3L11_RS07725	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
A3L11_RS07740	PF00474	Sodium:solute symporter family
A3L11_RS07750	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
A3L11_RS07750	PF00326	Prolyl oligopeptidase family
A3L11_RS07760	PF00271	Helicase conserved C-terminal domain
A3L11_RS07760	PF08494	DEAD/H associated
A3L11_RS07760	PF00270	DEAD/DEAH box helicase
A3L11_RS07760	PF08494	DEAD/H associated
A3L11_RS07760	PF00271	Helicase conserved C-terminal domain
A3L11_RS07760	PF00270	DEAD/DEAH box helicase
A3L11_RS07770	PF00535	Glycosyl transferase family 2
A3L11_RS07775	PF01384	Phosphate transporter family
A3L11_RS07780	PF01702	Queuine tRNA-ribosyltransferase
A3L11_RS07840	PF05343	M42 glutamyl aminopeptidase
A3L11_RS07870	PF07690	Major Facilitator Superfamily
A3L11_RS07875	PF01923	Cobalamin adenosyltransferase
A3L11_RS07885	PF01008	Initiation factor 2 subunit family
A3L11_RS07900	PF00994	Probable molybdopterin binding domain
A3L11_RS07900	PF02464	Competence-damaged protein
A3L11_RS07900	PF18146	Damage-inducible protein CinA KH domain
A3L11_RS07905	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A3L11_RS07905	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
A3L11_RS07910	PF03222	Tryptophan/tyrosine permease family
A3L11_RS07915	PF02594	Uncharacterised ACR, YggU family COG1872
A3L11_RS07930	PF01934	Protein of unknown function DUF86
A3L11_RS07935	PF03129	Anticodon binding domain
A3L11_RS07935	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L11_RS07940	PF00128	Alpha amylase, catalytic domain
A3L11_RS07940	PF02903	Alpha amylase, N-terminal ig-like domain
A3L11_RS07940	PF16657	Maltogenic Amylase, C-terminal domain
A3L11_RS07955	PF01554	MatE
A3L11_RS07975	PF02585	GlcNAc-PI de-N-acetylase
A3L11_RS07990	PF00232	Glycosyl hydrolase family 1
A3L11_RS07995	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
A3L11_RS08000	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_RS08005	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_RS08005	PF12911	N-terminal TM domain of oligopeptide transport permease C
A3L11_RS08010	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L11_RS08010	PF00005	ABC transporter
A3L11_RS08015	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L11_RS08015	PF00005	ABC transporter
A3L11_RS08020	PF01380	SIS domain
A3L11_RS08025	PF01301	Glycosyl hydrolases family 35
A3L11_RS08030	PF02005	N2,N2-dimethylguanosine tRNA methyltransferase
A3L11_RS08045	PF00557	Metallopeptidase family M24
A3L11_RS08045	PF01321	Creatinase/Prolidase N-terminal domain
A3L11_RS08075	PF07670	Nucleoside recognition
A3L11_RS08075	PF02421	Ferrous iron transport protein B
A3L11_RS08075	PF17910	FeoB cytosolic helical domain
A3L11_RS08075	PF07664	Ferrous iron transport protein B C terminus
A3L11_RS08085	PF00483	Nucleotidyl transferase
A3L11_RS08100	PF02441	Flavoprotein
A3L11_RS08115	PF01926	50S ribosome-binding GTPase
A3L11_RS08115	PF06071	Protein of unknown function (DUF933)
A3L11_RS08125	PF12706	Beta-lactamase superfamily domain
A3L11_RS08130	PF01544	CorA-like Mg2+ transporter protein
A3L11_RS08135	PF01177	Asp/Glu/Hydantoin racemase
A3L11_RS08145	PF01523	Putative modulator of DNA gyrase
A3L11_RS08155	PF13173	AAA domain
A3L11_RS08155	PF13635	Domain of unknown function (DUF4143)
A3L11_RS08165	PF00565	Staphylococcal nuclease homologue
A3L11_RS08190	PF00133	tRNA synthetases class I (I, L, M and V)
A3L11_RS08190	PF10458	Valyl tRNA synthetase tRNA binding arm
A3L11_RS08190	PF08264	Anticodon-binding domain of tRNA
A3L11_RS08210	PF00994	Probable molybdopterin binding domain
A3L11_RS08215	PF03453	MoeA N-terminal region (domain I and II)
A3L11_RS08215	PF03454	MoeA C-terminal region (domain IV)
A3L11_RS08215	PF00994	Probable molybdopterin binding domain
A3L11_RS08240	PF01966	HD domain
A3L11_RS08250	PF13302	Acetyltransferase (GNAT) domain
A3L11_RS08255	PF02903	Alpha amylase, N-terminal ig-like domain
A3L11_RS08255	PF00128	Alpha amylase, catalytic domain
A3L11_RS08260	PF17760	UvrA interaction domain
A3L11_RS08260	PF00005	ABC transporter
A3L11_RS08260	PF17755	UvrA DNA-binding domain
A3L11_RS08285	PF01916	Deoxyhypusine synthase
A3L11_RS08295	PF00857	Isochorismatase family
A3L11_RS08300	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS08310	PF01435	Peptidase family M48
A3L11_RS08315	PF01435	Peptidase family M48
A3L11_RS08325	PF00118	TCP-1/cpn60 chaperonin family
A3L11_RS08335	PF00069	Protein kinase domain
A3L11_RS08340	PF01713	Smr domain
A3L11_RS08340	PF00488	MutS domain V
A3L11_RS08350	PF01967	MoaC family
A3L11_RS08355	PF00005	ABC transporter
A3L11_RS08365	PF12679	ABC-2 family transporter protein
A3L11_RS08370	PF01139	tRNA-splicing ligase RtcB
A3L11_RS08380	PF01189	16S rRNA methyltransferase RsmB/F
A3L11_RS08380	PF17125	N-terminal domain of 16S rRNA methyltransferase RsmF
A3L11_RS08380	PF13636	RNA-binding PUA-like domain of methyltransferase RsmF
A3L11_RS08400	PF02548	Ketopantoate hydroxymethyltransferase
A3L11_RS08405	PF00535	Glycosyl transferase family 2
A3L11_RS08435	PF09186	Domain of unknown function (DUF1949)
A3L11_RS08435	PF01205	Uncharacterized protein family UPF0029
A3L11_RS08440	PF00271	Helicase conserved C-terminal domain
A3L11_RS08440	PF00270	DEAD/DEAH box helicase
A3L11_RS08440	PF09369	Domain of unknown function (DUF1998)
A3L11_RS08455	PF01867	CRISPR associated protein Cas1
A3L11_RS08460	PF09827	CRISPR associated protein Cas2
A3L11_RS08485	PF01966	HD domain
A3L11_RS08485	PF18211	Csm1 subunit domain B
A3L11_RS08530	PF00005	ABC transporter
A3L11_RS08540	PF00586	AIR synthase related protein, N-terminal domain
A3L11_RS08540	PF02769	AIR synthase related protein, C-terminal domain
A3L11_RS08585	PF13173	AAA domain
A3L11_RS08585	PF13635	Domain of unknown function (DUF4143)
A3L11_RS08600	PF05958	tRNA (Uracil-5-)-methyltransferase
A3L11_RS08600	PF01938	TRAM domain
A3L11_RS08605	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L11_RS08605	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
A3L11_RS08630	PF00338	Ribosomal protein S10p/S20e
A3L11_RS08635	PF03143	Elongation factor Tu C-terminal domain
A3L11_RS08635	PF03144	Elongation factor Tu domain 2
A3L11_RS08635	PF00009	Elongation factor Tu GTP binding domain
A3L11_RS08645	PF03144	Elongation factor Tu domain 2
A3L11_RS08645	PF00009	Elongation factor Tu GTP binding domain
A3L11_RS08645	PF00679	Elongation factor G C-terminus
A3L11_RS08645	PF14492	Elongation Factor G, domain II
A3L11_RS08645	PF03764	Elongation factor G, domain IV
A3L11_RS08660	PF01966	HD domain
A3L11_RS08665	PF13732	Domain of unknown function (DUF4162)
A3L11_RS08665	PF00005	ABC transporter
A3L11_RS08705	PF02649	Type I GTP cyclohydrolase folE2
A3L11_RS08720	PF12102	Domain of unknown function (DUF3578)
A3L11_RS08720	PF07728	AAA domain (dynein-related subfamily)
A3L11_RS08760	PF00005	ABC transporter
A3L11_RS08770	PF01351	Ribonuclease HII
A3L11_RS08800	PF01380	SIS domain
A3L11_RS08815	PF01209	ubiE/COQ5 methyltransferase family
A3L11_RS08820	PF01910	Thiamine-binding protein
A3L11_RS08835	PF05191	Adenylate kinase, active site lid
A3L11_RS08850	PF13520	Amino acid permease
A3L11_RS08860	PF00391	PEP-utilising enzyme, mobile domain
A3L11_RS08860	PF00224	Pyruvate kinase, barrel domain
A3L11_RS08860	PF02887	Pyruvate kinase, alpha/beta domain
A3L11_RS08865	PF00578	AhpC/TSA family
A3L11_RS08905	PF00999	Sodium/hydrogen exchanger family
A3L11_RS08910	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
A3L11_RS08915	PF02641	Uncharacterized ACR, COG1993
A3L11_RS08920	PF02441	Flavoprotein
A3L11_RS08920	PF04127	DNA / pantothenate metabolism flavoprotein
A3L11_RS08925	PF00924	Mechanosensitive ion channel
A3L11_RS08925	PF05552	Conserved TM helix
A3L11_RS08930	PF13614	AAA domain
A3L11_RS08935	PF01177	Asp/Glu/Hydantoin racemase
A3L11_RS08970	PF07690	Major Facilitator Superfamily
A3L11_RS08990	PF00005	ABC transporter
A3L11_RS09015	PF13419	Haloacid dehalogenase-like hydrolase
A3L11_RS09025	PF02146	Sir2 family
A3L11_RS09030	PF00464	Serine hydroxymethyltransferase
A3L11_RS09060	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
A3L11_RS09060	PF00384	Molybdopterin oxidoreductase
A3L11_RS09060	PF01568	Molydopterin dinucleotide binding domain
A3L11_RS09065	PF10417	C-terminal domain of 1-Cys peroxiredoxin
A3L11_RS09065	PF00578	AhpC/TSA family
A3L11_RS09090	PF00005	ABC transporter
A3L11_RS09115	PF13302	Acetyltransferase (GNAT) domain
A3L11_RS09140	PF01206	Sulfurtransferase TusA
A3L11_RS09155	PF01641	SelR domain
A3L11_RS09155	PF01625	Peptide methionine sulfoxide reductase
A3L11_RS09165	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L11_RS09175	PF00210	Ferritin-like domain
A3L11_RS09185	PF00258	Flavodoxin
A3L11_RS09185	PF00753	Metallo-beta-lactamase superfamily
A3L11_RS09190	PF14759	Reductase C-terminal
A3L11_RS09190	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_RS09195	PF02915	Rubrerythrin
A3L11_RS09200	PF00301	Rubredoxin
A3L11_RS09205	PF01880	Desulfoferrodoxin
A3L11_RS09245	PF01475	Ferric uptake regulator family
A3L11_RS09275	PF00005	ABC transporter
A3L11_RS09300	PF01653	NAD-dependent DNA ligase adenylation domain
A3L11_RS09300	PF00533	BRCA1 C Terminus (BRCT) domain
A3L11_RS09300	PF12826	Helix-hairpin-helix motif
A3L11_RS09300	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
A3L11_RS09300	PF03120	NAD-dependent DNA ligase OB-fold domain
A3L11_RS09325	PF01867	CRISPR associated protein Cas1
A3L11_RS09330	PF09827	CRISPR associated protein Cas2
A3L11_RS09340	PF00270	DEAD/DEAH box helicase
A3L11_RS09340	PF18395	Cas3 C-terminal domain
A3L11_RS09340	PF18019	HD domain
A3L11_RS09355	PF01411	tRNA synthetases class II (A)
A3L11_RS09355	PF02272	DHHA1 domain
A3L11_RS09355	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L11_RS09365	PF00375	Sodium:dicarboxylate symporter family
A3L11_RS09370	PF08279	HTH domain
A3L11_RS09370	PF02237	Biotin protein ligase C terminal domain
A3L11_RS09370	PF03099	Biotin/lipoate A/B protein ligase family
A3L11_RS09375	PF01791	DeoC/LacD family aldolase
A3L11_RS09380	PF00682	HMGL-like
A3L11_RS09380	PF00364	Biotin-requiring enzyme
A3L11_RS09380	PF02436	Conserved carboxylase domain
A3L11_RS09385	PF13722	5TM C-terminal transporter carbon starvation CstA
A3L11_RS09385	PF02554	Carbon starvation protein CstA
A3L11_RS09400	PF02374	Anion-transporting ATPase
A3L11_RS09400	PF17886	HSP20-like domain found in ArsA
A3L11_RS09425	PF12146	Serine aminopeptidase, S33
A3L11_RS09445	PF00709	Adenylosuccinate synthetase
A3L11_RS09450	PF16363	GDP-mannose 4,6 dehydratase
A3L11_RS09465	PF10609	NUBPL iron-transfer P-loop NTPase
A3L11_RS09470	PF10609	NUBPL iron-transfer P-loop NTPase
A3L11_RS09470	PF01883	Iron-sulfur cluster assembly protein
A3L11_RS09540	PF09828	Chromate resistance exported protein
A3L11_RS09550	PF02001	Protein of unknown function  DUF134
A3L11_RS09555	PF10397	Adenylosuccinate lyase C-terminus
A3L11_RS09555	PF00206	Lyase
A3L11_RS09575	PF03266	NTPase
A3L11_RS09580	PF01008	Initiation factor 2 subunit family
A3L11_RS09600	PF00465	Iron-containing alcohol dehydrogenase 
A3L11_RS09605	PF07690	Major Facilitator Superfamily
A3L11_RS09610	PF08494	DEAD/H associated
A3L11_RS09610	PF00270	DEAD/DEAH box helicase
A3L11_RS09610	PF00271	Helicase conserved C-terminal domain
A3L11_RS09620	PF07687	Peptidase dimerisation domain
A3L11_RS09620	PF01546	Peptidase family M20/M25/M40
A3L11_RS09625	PF00753	Metallo-beta-lactamase superfamily
A3L11_RS09640	PF01026	TatD related DNase
A3L11_RS09655	PF00701	Dihydrodipicolinate synthetase family
A3L11_RS09690	PF13304	AAA domain, putative AbiEii toxin, Type IV TA system
A3L11_RS09690	PF13304	AAA domain, putative AbiEii toxin, Type IV TA system
A3L11_RS09710	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
A3L11_RS09710	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
A3L11_RS09715	PF05958	tRNA (Uracil-5-)-methyltransferase
A3L11_RS09715	PF01938	TRAM domain
A3L11_RS09740	PF00009	Elongation factor Tu GTP binding domain
A3L11_RS09740	PF04760	Translation initiation factor IF-2, N-terminal region
A3L11_RS09740	PF08364	Bacterial translation initiation factor IF-2 associated region
A3L11_RS09740	PF11987	Translation-initiation factor 2
A3L11_RS09750	PF00334	Nucleoside diphosphate kinase
A3L11_RS09780	PF01507	Phosphoadenosine phosphosulfate reductase family
A3L11_RS09790	PF01145	SPFH domain / Band 7 family
A3L11_RS09800	PF01979	Amidohydrolase family
A3L11_RS09805	PF01336	OB-fold nucleic acid binding domain
A3L11_RS09805	PF00152	tRNA synthetases class II (D, K and N) 
A3L11_RS09840	PF01699	Sodium/calcium exchanger protein
A3L11_RS09855	PF05127	Helicase
A3L11_RS09855	PF13718	GNAT acetyltransferase 2
A3L11_RS09855	PF17176	tRNA-binding domain
A3L11_RS09855	PF08351	Domain of unknown function (DUF1726)
A3L11_RS09875	PF14010	Phosphoenolpyruvate carboxylase
A3L11_RS09890	PF02632	BioY family
A3L11_RS09895	PF00005	ABC transporter
A3L11_RS09900	PF02361	Cobalt transport protein
A3L11_RS09925	PF13404	AsnC-type helix-turn-helix domain
A3L11_RS09925	PF01037	Lrp/AsnC ligand binding domain
A3L11_RS09945	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_RS09950	PF00005	ABC transporter
A3L11_RS09950	PF08402	TOBE domain
A3L11_RS09975	PF00162	Phosphoglycerate kinase
A3L11_RS09990	PF00005	ABC transporter
A3L11_RS09990	PF13732	Domain of unknown function (DUF4162)
A3L11_RS10000	PF02811	PHP domain
A3L11_RS10005	PF02310	B12 binding domain
A3L11_RS10005	PF01642	Methylmalonyl-CoA mutase
A3L11_RS10025	PF06470	SMC proteins Flexible Hinge Domain
A3L11_RS10025	PF02463	RecF/RecN/SMC N terminal domain
A3L11_RS10040	PF00533	BRCA1 C Terminus (BRCT) domain
A3L11_RS10040	PF12826	Helix-hairpin-helix motif
A3L11_RS10040	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
A3L11_RS10040	PF03120	NAD-dependent DNA ligase OB-fold domain
A3L11_RS10040	PF01653	NAD-dependent DNA ligase adenylation domain
A3L11_RS10060	PF00270	DEAD/DEAH box helicase
A3L11_RS10060	PF00271	Helicase conserved C-terminal domain
A3L11_RS10075	PF01884	PcrB family
A3L11_RS10090	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
A3L11_RS10090	PF02885	Glycosyl transferase family, helical bundle domain
A3L11_RS10090	PF00591	Glycosyl transferase family, a/b domain
A3L11_RS10105	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L11_RS10110	PF01145	SPFH domain / Band 7 family
A3L11_RS10110	PF16200	C-terminal region of band_7
A3L11_RS10125	PF00730	HhH-GPD superfamily base excision DNA repair protein
A3L11_RS10150	PF01520	N-acetylmuramoyl-L-alanine amidase
A3L11_RS10150	PF04122	Putative cell wall binding repeat 2
A3L11_RS10160	PF03746	LamB/YcsF family
A3L11_RS10165	PF02682	Carboxyltransferase domain, subdomain C and D
A3L11_RS10170	PF02626	Carboxyltransferase domain, subdomain A and B 
A3L11_RS10180	PF00465	Iron-containing alcohol dehydrogenase 
A3L11_RS10190	PF00459	Inositol monophosphatase family
A3L11_RS10205	PF13307	Helicase C-terminal domain
A3L11_RS10205	PF04851	Type III restriction enzyme, res subunit
A3L11_RS10220	PF05343	M42 glutamyl aminopeptidase
A3L11_RS10235	PF03749	Sugar fermentation stimulation protein RE domain
A3L11_RS10235	PF17746	SfsA N-terminal OB domain
A3L11_RS10250	PF02899	Phage integrase, N-terminal SAM-like domain
A3L11_RS10250	PF00589	Phage integrase family
A3L11_RS10265	PF17645	Arylmalonate decarboxylase
A3L11_RS10270	PF00881	Nitroreductase family
A3L11_RS10280	PF02926	THUMP domain
A3L11_RS10280	PF02568	Thiamine biosynthesis protein (ThiI)
A3L11_RS10290	PF02926	THUMP domain
A3L11_RS10290	PF02568	Thiamine biosynthesis protein (ThiI)
A3L11_RS10300	PF07690	Major Facilitator Superfamily
A3L11_RS10305	PF13607	Succinyl-CoA ligase like flavodoxin domain
A3L11_RS10305	PF13380	CoA binding domain
A3L11_RS10305	PF00583	Acetyltransferase (GNAT) family
A3L11_RS10310	PF13380	CoA binding domain
A3L11_RS10310	PF13607	Succinyl-CoA ligase like flavodoxin domain
A3L11_RS10315	PF01261	Xylose isomerase-like TIM barrel
A3L11_RS10340	PF10576	Iron-sulfur binding domain of endonuclease III
A3L11_RS10340	PF00633	Helix-hairpin-helix motif
A3L11_RS10340	PF00730	HhH-GPD superfamily base excision DNA repair protein
A3L11_RS10350	PF02545	Maf-like protein
A3L11_RS10375	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L11_RS10385	PF00733	Asparagine synthase
A3L11_RS10385	PF13537	Glutamine amidotransferase domain
A3L11_RS10395	PF13439	Glycosyltransferase Family 4
A3L11_RS10395	PF00534	Glycosyl transferases group 1
A3L11_RS10400	PF03481	Putative GTP-binding controlling metal-binding
A3L11_RS10400	PF01300	Telomere recombination
A3L11_RS10425	PF02403	Seryl-tRNA synthetase N-terminal domain
A3L11_RS10425	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L11_RS10430	PF03454	MoeA C-terminal region (domain IV)
A3L11_RS10430	PF00994	Probable molybdopterin binding domain
A3L11_RS10430	PF03453	MoeA N-terminal region (domain I and II)
A3L11_RS10460	PF01434	Peptidase family M41
A3L11_RS10460	PF06480	FtsH Extracellular
A3L11_RS10460	PF17862	AAA+ lid domain
A3L11_RS10460	PF00004	ATPase family associated with various cellular activities (AAA)
A3L11_RS10560	PF02310	B12 binding domain
A3L11_RS10560	PF01642	Methylmalonyl-CoA mutase
A3L11_RS10570	PF00005	ABC transporter
A3L11_RS10585	PF00011	Hsp20/alpha crystallin family
A3L11_RS10590	PF17862	AAA+ lid domain
A3L11_RS10590	PF00004	ATPase family associated with various cellular activities (AAA)
A3L11_RS10590	PF01434	Peptidase family M41
A3L11_RS10590	PF06480	FtsH Extracellular
A3L11_RS10635	PF12706	Beta-lactamase superfamily domain
A3L11_RS10640	PF00881	Nitroreductase family
A3L11_RS10650	PF09334	tRNA synthetases class I (M)
A3L11_RS10650	PF01588	Putative tRNA binding domain
A3L11_RS10650	PF08264	Anticodon-binding domain of tRNA
A3L11_RS10665	PF13302	Acetyltransferase (GNAT) domain
A3L11_RS10705	PF00583	Acetyltransferase (GNAT) family
A3L11_RS10715	PF02517	CPBP intramembrane metalloprotease
A3L11_RS10730	PF00664	ABC transporter transmembrane region
A3L11_RS10730	PF00005	ABC transporter
A3L11_RS10735	PF00005	ABC transporter
A3L11_RS10735	PF00664	ABC transporter transmembrane region
A3L11_RS10740	PF00293	NUDIX domain
A3L11_RS10740	PF01467	Cytidylyltransferase-like
A3L11_RS10760	PF01066	CDP-alcohol phosphatidyltransferase
A3L11_RS10765	PF13419	Haloacid dehalogenase-like hydrolase
A3L11_RS10820	PF04199	Putative cyclase
A3L11_RS10825	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
A3L11_RS10825	PF05221	S-adenosyl-L-homocysteine hydrolase
A3L11_RS10850	PF07726	ATPase family associated with various cellular activities (AAA)
A3L11_RS10850	PF17863	AAA lid domain
