THAL_RS00120	PWY-6829	tRNA methylation (yeast)
THAL_RS00140	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THAL_RS00140	PWY-622	starch biosynthesis
THAL_RS00150	PWY-4983	L-citrulline-nitric oxide cycle
THAL_RS00150	PWY-4984	urea cycle
THAL_RS00150	PWY-5	canavanine biosynthesis
THAL_RS00150	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THAL_RS00150	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THAL_RS00240	PWY-5484	glycolysis II (from fructose 6-phosphate)
THAL_RS00255	PWY-2941	L-lysine biosynthesis II
THAL_RS00255	PWY-2942	L-lysine biosynthesis III
THAL_RS00255	PWY-5097	L-lysine biosynthesis VI
THAL_RS00330	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THAL_RS00450	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THAL_RS00540	PWY-6654	phosphopantothenate biosynthesis III
THAL_RS00590	PWY-5667	CDP-diacylglycerol biosynthesis I
THAL_RS00590	PWY-5981	CDP-diacylglycerol biosynthesis III
THAL_RS00600	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THAL_RS00635	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THAL_RS00635	PWY-622	starch biosynthesis
THAL_RS00645	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THAL_RS00645	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THAL_RS00645	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THAL_RS00660	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
THAL_RS00660	PWY-5739	GDP-D-perosamine biosynthesis
THAL_RS00660	PWY-5740	GDP-L-colitose biosynthesis
THAL_RS00660	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
THAL_RS00660	PWY-7573	GDP-mycosamine biosynthesis
THAL_RS00745	PWY-2201	folate transformations I
THAL_RS00775	PWY-6749	CMP-legionaminate biosynthesis I
THAL_RS00780	PWY-4981	L-proline biosynthesis II (from arginine)
THAL_RS00780	PWY-4984	urea cycle
THAL_RS00780	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THAL_RS00800	PWY-6938	NADH repair
THAL_RS00805	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THAL_RS00805	PWY-5686	UMP biosynthesis
THAL_RS00805	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THAL_RS00810	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THAL_RS00810	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THAL_RS00810	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THAL_RS00810	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THAL_RS00815	PWY-2781	<i>cis</i>-zeatin biosynthesis
THAL_RS00820	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THAL_RS00820	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THAL_RS00820	PWY-6897	thiamin salvage II
THAL_RS00820	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
THAL_RS00820	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
THAL_RS00820	PWY-7356	thiamin salvage IV (yeast)
THAL_RS00820	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THAL_RS00890	PWY-3341	L-proline biosynthesis III
THAL_RS00890	PWY-4981	L-proline biosynthesis II (from arginine)
THAL_RS00890	PWY-6344	L-ornithine degradation II (Stickland reaction)
THAL_RS00900	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THAL_RS00915	PWY-5316	nicotine biosynthesis
THAL_RS00915	PWY-7342	superpathway of nicotine biosynthesis
THAL_RS00980	PWY-5392	reductive TCA cycle II
THAL_RS00980	PWY-5537	pyruvate fermentation to acetate V
THAL_RS00980	PWY-5538	pyruvate fermentation to acetate VI
THAL_RS00980	PWY-5690	TCA cycle II (plants and fungi)
THAL_RS00980	PWY-5913	TCA cycle VI (obligate autotrophs)
THAL_RS00980	PWY-6728	methylaspartate cycle
THAL_RS00980	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THAL_RS00980	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THAL_RS00985	PWY-5172	acetyl-CoA biosynthesis III (from citrate)
THAL_RS00985	PWY-5392	reductive TCA cycle II
THAL_RS00985	PWY-5537	pyruvate fermentation to acetate V
THAL_RS00985	PWY-5538	pyruvate fermentation to acetate VI
THAL_RS00985	PWY-5690	TCA cycle II (plants and fungi)
THAL_RS00985	PWY-5913	TCA cycle VI (obligate autotrophs)
THAL_RS00985	PWY-6728	methylaspartate cycle
THAL_RS00985	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THAL_RS00985	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THAL_RS01050	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
THAL_RS01090	PWY-6599	guanine and guanosine salvage II
THAL_RS01090	PWY-6609	adenine and adenosine salvage III
THAL_RS01090	PWY-6610	adenine and adenosine salvage IV
THAL_RS01090	PWY-6620	guanine and guanosine salvage
THAL_RS01100	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
THAL_RS01160	PWY-6614	tetrahydrofolate biosynthesis
THAL_RS01180	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THAL_RS01185	PWY-3341	L-proline biosynthesis III
THAL_RS01185	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THAL_RS01195	PWY-6703	preQ<sub>0</sub> biosynthesis
THAL_RS01210	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THAL_RS01210	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THAL_RS01215	PWY-6012	acyl carrier protein metabolism I
THAL_RS01215	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
THAL_RS01220	PWY-6910	hydroxymethylpyrimidine salvage
THAL_RS01220	PWY-7356	thiamin salvage IV (yeast)
THAL_RS01220	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THAL_RS01230	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THAL_RS01230	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THAL_RS01230	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THAL_RS01275	PWY-6823	molybdenum cofactor biosynthesis
THAL_RS01275	PWY-6891	thiazole biosynthesis II (Bacillus)
THAL_RS01275	PWY-6892	thiazole biosynthesis I (E. coli)
THAL_RS01275	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
THAL_RS01335	PWY-2161	folate polyglutamylation
THAL_RS01360	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THAL_RS01360	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THAL_RS01370	PWY-5381	pyridine nucleotide cycling (plants)
THAL_RS01370	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THAL_RS01385	PWY-5269	cardiolipin biosynthesis II
THAL_RS01385	PWY-5668	cardiolipin biosynthesis I
THAL_RS01395	PWY-5663	tetrahydrobiopterin biosynthesis I
THAL_RS01395	PWY-5664	tetrahydrobiopterin biosynthesis II
THAL_RS01395	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THAL_RS01395	PWY-6703	preQ<sub>0</sub> biosynthesis
THAL_RS01395	PWY-6983	tetrahydrobiopterin biosynthesis III
THAL_RS01395	PWY-7442	drosopterin and aurodrosopterin biosynthesis
THAL_RS01415	PWY-6167	flavin biosynthesis II (archaea)
THAL_RS01415	PWY-6168	flavin biosynthesis III (fungi)
THAL_RS01415	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THAL_RS01430	PWY-3781	aerobic respiration I (cytochrome c)
THAL_RS01430	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THAL_RS01430	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THAL_RS01430	PWY-5690	TCA cycle II (plants and fungi)
THAL_RS01430	PWY-6728	methylaspartate cycle
THAL_RS01430	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THAL_RS01430	PWY-7254	TCA cycle VII (acetate-producers)
THAL_RS01430	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THAL_RS01510	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THAL_RS01595	PWY-5316	nicotine biosynthesis
THAL_RS01595	PWY-7342	superpathway of nicotine biosynthesis
THAL_RS01615	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THAL_RS01615	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THAL_RS01615	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THAL_RS01640	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THAL_RS01650	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THAL_RS01695	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
THAL_RS01695	PWY-2201	folate transformations I
THAL_RS01695	PWY-3841	folate transformations II
THAL_RS01695	PWY-5030	L-histidine degradation III
THAL_RS01695	PWY-5497	purine nucleobases degradation II (anaerobic)
THAL_RS01695	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
THAL_RS01715	PWY-4381	fatty acid biosynthesis initiation I
THAL_RS01715	PWY-5743	3-hydroxypropanoate cycle
THAL_RS01715	PWY-5744	glyoxylate assimilation
THAL_RS01715	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THAL_RS01715	PWY-6679	jadomycin biosynthesis
THAL_RS01715	PWY-6722	candicidin biosynthesis
THAL_RS01715	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THAL_RS01755	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
THAL_RS01760	PWY-2941	L-lysine biosynthesis II
THAL_RS01760	PWY-2942	L-lysine biosynthesis III
THAL_RS01760	PWY-5097	L-lysine biosynthesis VI
THAL_RS01760	PWY-6559	spermidine biosynthesis II
THAL_RS01760	PWY-6562	norspermidine biosynthesis
THAL_RS01760	PWY-7153	grixazone biosynthesis
THAL_RS01800	PWY-7294	xylose degradation IV
THAL_RS01800	PWY-7295	L-arabinose degradation IV
THAL_RS01800	PWY-7560	methylerythritol phosphate pathway II
THAL_RS01830	PWY-3781	aerobic respiration I (cytochrome c)
THAL_RS01830	PWY-6692	Fe(II) oxidation
THAL_RS01830	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
THAL_RS01830	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THAL_RS01860	PWY-5964	guanylyl molybdenum cofactor biosynthesis
THAL_RS01860	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
THAL_RS01890	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THAL_RS01890	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
THAL_RS01895	PWY-6749	CMP-legionaminate biosynthesis I
THAL_RS01925	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THAL_RS01925	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THAL_RS01930	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THAL_RS01930	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THAL_RS01935	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THAL_RS01935	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
THAL_RS01945	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THAL_RS01945	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
THAL_RS02015	PWY-6823	molybdenum cofactor biosynthesis
THAL_RS02020	PWY-6823	molybdenum cofactor biosynthesis
THAL_RS02050	PWY-6823	molybdenum cofactor biosynthesis
THAL_RS02075	PWY-6871	3-methylbutanol biosynthesis
THAL_RS02160	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
THAL_RS02160	PWY-7177	UTP and CTP dephosphorylation II
THAL_RS02160	PWY-7185	UTP and CTP dephosphorylation I
THAL_RS02215	PWY-1622	formaldehyde assimilation I (serine pathway)
THAL_RS02215	PWY-181	photorespiration
THAL_RS02215	PWY-2161	folate polyglutamylation
THAL_RS02215	PWY-2201	folate transformations I
THAL_RS02215	PWY-3661	glycine betaine degradation I
THAL_RS02215	PWY-3661-1	glycine betaine degradation II (mammalian)
THAL_RS02215	PWY-3841	folate transformations II
THAL_RS02215	PWY-5497	purine nucleobases degradation II (anaerobic)
THAL_RS02250	PWY-7205	CMP phosphorylation
THAL_RS02255	PWY-5958	acridone alkaloid biosynthesis
THAL_RS02255	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THAL_RS02255	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THAL_RS02275	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
THAL_RS02275	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
THAL_RS02280	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
THAL_RS02285	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
THAL_RS02285	PWY-5368	dimorphecolate biosynthesis
THAL_RS02285	PWY-5995	linoleate biosynthesis I (plants)
THAL_RS02285	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
THAL_RS02285	PWY-6803	phosphatidylcholine acyl editing
THAL_RS02285	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
THAL_RS02285	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
THAL_RS02285	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
THAL_RS02285	PWY-7470	phosphatidylcholine biosynthesis VII
THAL_RS02285	PWY-7618	ricinoleate biosynthesis
THAL_RS02300	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
THAL_RS02315	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THAL_RS02335	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THAL_RS02350	PWY-5057	L-valine degradation II
THAL_RS02350	PWY-5076	L-leucine degradation III
THAL_RS02350	PWY-5078	L-isoleucine degradation II
THAL_RS02350	PWY-5101	L-isoleucine biosynthesis II
THAL_RS02350	PWY-5103	L-isoleucine biosynthesis III
THAL_RS02350	PWY-5104	L-isoleucine biosynthesis IV
THAL_RS02350	PWY-5108	L-isoleucine biosynthesis V
THAL_RS02375	PWY-3801	sucrose degradation II (sucrose synthase)
THAL_RS02375	PWY-6527	stachyose degradation
THAL_RS02375	PWY-7238	sucrose biosynthesis II
THAL_RS02375	PWY-7343	UDP-glucose biosynthesis
THAL_RS02425	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THAL_RS02425	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THAL_RS02560	PWY-723	alkylnitronates degradation
THAL_RS02565	PWY-6123	inosine-5'-phosphate biosynthesis I
THAL_RS02565	PWY-6124	inosine-5'-phosphate biosynthesis II
THAL_RS02565	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THAL_RS02565	PWY-7234	inosine-5'-phosphate biosynthesis III
THAL_RS02580	PWY-5381	pyridine nucleotide cycling (plants)
THAL_RS02580	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THAL_RS02600	PWY-5269	cardiolipin biosynthesis II
THAL_RS02600	PWY-5668	cardiolipin biosynthesis I
THAL_RS02615	PWY-2201	folate transformations I
THAL_RS02615	PWY-3841	folate transformations II
THAL_RS02680	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THAL_RS02680	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THAL_RS02680	PWY-5989	stearate biosynthesis II (bacteria and plants)
THAL_RS02680	PWY-6113	superpathway of mycolate biosynthesis
THAL_RS02680	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THAL_RS02680	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THAL_RS02680	PWY-7663	gondoate biosynthesis (anaerobic)
THAL_RS02680	PWY-7664	oleate biosynthesis IV (anaerobic)
THAL_RS02680	PWYG-321	mycolate biosynthesis
THAL_RS02685	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
THAL_RS02695	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THAL_RS02705	PWY-4983	L-citrulline-nitric oxide cycle
THAL_RS02705	PWY-4984	urea cycle
THAL_RS02705	PWY-5	canavanine biosynthesis
THAL_RS02705	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THAL_RS02705	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THAL_RS02710	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THAL_RS02710	PWY-6416	quinate degradation II
THAL_RS02710	PWY-6707	gallate biosynthesis
THAL_RS02715	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THAL_RS02715	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THAL_RS02720	PWY-6829	tRNA methylation (yeast)
THAL_RS02720	PWY-6965	methylamine degradation II
THAL_RS02745	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THAL_RS02780	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THAL_RS02780	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
THAL_RS02780	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THAL_RS02780	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THAL_RS02780	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
THAL_RS02780	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THAL_RS02780	PWY-7205	CMP phosphorylation
THAL_RS02780	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THAL_RS02780	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THAL_RS02780	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THAL_RS02780	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THAL_RS02780	PWY-7224	purine deoxyribonucleosides salvage
THAL_RS02780	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THAL_RS02780	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THAL_RS02820	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
THAL_RS02820	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
THAL_RS02850	PWY-5667	CDP-diacylglycerol biosynthesis I
THAL_RS02850	PWY-5981	CDP-diacylglycerol biosynthesis III
THAL_RS02870	PWY-1042	glycolysis IV (plant cytosol)
THAL_RS02870	PWY-1622	formaldehyde assimilation I (serine pathway)
THAL_RS02870	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THAL_RS02870	PWY-5484	glycolysis II (from fructose 6-phosphate)
THAL_RS02870	PWY-5723	Rubisco shunt
THAL_RS02870	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THAL_RS02870	PWY-6886	1-butanol autotrophic biosynthesis
THAL_RS02870	PWY-6901	superpathway of glucose and xylose degradation
THAL_RS02870	PWY-7003	glycerol degradation to butanol
THAL_RS02870	PWY-7124	ethylene biosynthesis V (engineered)
THAL_RS02870	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THAL_RS02960	PWY-7396	butanol and isobutanol biosynthesis (engineered)
THAL_RS03035	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THAL_RS03035	PWY-5723	Rubisco shunt
THAL_RS03195	PWY-1042	glycolysis IV (plant cytosol)
THAL_RS03195	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THAL_RS03195	PWY-5484	glycolysis II (from fructose 6-phosphate)
THAL_RS03195	PWY-5723	Rubisco shunt
THAL_RS03195	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THAL_RS03195	PWY-6886	1-butanol autotrophic biosynthesis
THAL_RS03195	PWY-6901	superpathway of glucose and xylose degradation
THAL_RS03195	PWY-7003	glycerol degradation to butanol
THAL_RS03195	PWY-7124	ethylene biosynthesis V (engineered)
THAL_RS03195	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THAL_RS03215	PWY-6167	flavin biosynthesis II (archaea)
THAL_RS03215	PWY-6168	flavin biosynthesis III (fungi)
THAL_RS03215	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THAL_RS03245	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
THAL_RS03245	PWY-6167	flavin biosynthesis II (archaea)
THAL_RS03245	PWY-6168	flavin biosynthesis III (fungi)
THAL_RS03265	PWY-5367	petroselinate biosynthesis
THAL_RS03265	PWY-5515	L-arabinose degradation II
THAL_RS03265	PWY-5525	D-glucuronate degradation I
THAL_RS03265	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THAL_RS03265	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THAL_RS03265	PWY-5989	stearate biosynthesis II (bacteria and plants)
THAL_RS03265	PWY-5994	palmitate biosynthesis I (animals and fungi)
THAL_RS03265	PWY-6113	superpathway of mycolate biosynthesis
THAL_RS03265	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THAL_RS03265	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THAL_RS03265	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THAL_RS03265	PWY-7663	gondoate biosynthesis (anaerobic)
THAL_RS03265	PWY-7664	oleate biosynthesis IV (anaerobic)
THAL_RS03265	PWYG-321	mycolate biosynthesis
THAL_RS03270	PWY-6700	queuosine biosynthesis
THAL_RS03350	PWY-5392	reductive TCA cycle II
THAL_RS03350	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THAL_RS03385	PWY-5381	pyridine nucleotide cycling (plants)
THAL_RS03390	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THAL_RS03390	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THAL_RS03410	PWY-6825	phosphatidylcholine biosynthesis V
THAL_RS03415	PWY-6834	spermidine biosynthesis III
THAL_RS03445	PWY-1622	formaldehyde assimilation I (serine pathway)
THAL_RS03445	PWY-5392	reductive TCA cycle II
THAL_RS03445	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THAL_RS03445	PWY-5690	TCA cycle II (plants and fungi)
THAL_RS03445	PWY-5913	TCA cycle VI (obligate autotrophs)
THAL_RS03445	PWY-6728	methylaspartate cycle
THAL_RS03445	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THAL_RS03445	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THAL_RS03445	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THAL_RS03460	PWY-5155	&beta;-alanine biosynthesis III
THAL_RS03465	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THAL_RS03465	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THAL_RS03465	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THAL_RS03465	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THAL_RS03465	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THAL_RS03465	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THAL_RS03465	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THAL_RS03465	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THAL_RS03470	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THAL_RS03470	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THAL_RS03470	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THAL_RS03470	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THAL_RS03470	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THAL_RS03470	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THAL_RS03470	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THAL_RS03470	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THAL_RS03500	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THAL_RS03500	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THAL_RS03505	PWY-2201	folate transformations I
THAL_RS03505	PWY-5497	purine nucleobases degradation II (anaerobic)
THAL_RS03565	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
THAL_RS03565	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
THAL_RS03575	PWY-5704	urea degradation II
THAL_RS03600	PWY-5704	urea degradation II
THAL_RS03630	PWY-5704	urea degradation II
THAL_RS03635	PWY-5704	urea degradation II
THAL_RS03700	PWY-2201	folate transformations I
THAL_RS03775	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THAL_RS03835	PWY-5198	factor 420 biosynthesis
THAL_RS03835	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
THAL_RS03835	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
THAL_RS03890	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THAL_RS03890	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THAL_RS03890	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THAL_RS03890	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
THAL_RS03950	PWY-6672	<i>cis</i>-genanyl-CoA degradation
THAL_RS03950	PWY-7118	chitin degradation to ethanol
THAL_RS03975	PWY-2201	folate transformations I
THAL_RS04060	PWY-6703	preQ<sub>0</sub> biosynthesis
THAL_RS04110	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THAL_RS04145	PWY-622	starch biosynthesis
THAL_RS04170	PWY-1042	glycolysis IV (plant cytosol)
THAL_RS04170	PWY-5484	glycolysis II (from fructose 6-phosphate)
THAL_RS04170	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THAL_RS04170	PWY-7003	glycerol degradation to butanol
THAL_RS04195	PWY-2941	L-lysine biosynthesis II
THAL_RS04195	PWY-2942	L-lysine biosynthesis III
THAL_RS04195	PWY-5097	L-lysine biosynthesis VI
THAL_RS04200	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THAL_RS04210	PWY-6936	seleno-amino acid biosynthesis
THAL_RS04265	PWY-6823	molybdenum cofactor biosynthesis
THAL_RS04300	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
THAL_RS04310	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THAL_RS04310	PWY-5686	UMP biosynthesis
THAL_RS04310	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THAL_RS04325	PWY-6891	thiazole biosynthesis II (Bacillus)
THAL_RS04325	PWY-6892	thiazole biosynthesis I (E. coli)
THAL_RS04325	PWY-7560	methylerythritol phosphate pathway II
THAL_RS04330	PWY-5659	GDP-mannose biosynthesis
THAL_RS04330	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
THAL_RS04375	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THAL_RS04375	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THAL_RS04405	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THAL_RS04405	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THAL_RS04405	PWY-6896	thiamin salvage I
THAL_RS04405	PWY-6897	thiamin salvage II
THAL_RS04420	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THAL_RS04420	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THAL_RS04420	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THAL_RS04435	PWY-6703	preQ<sub>0</sub> biosynthesis
THAL_RS04470	PWY-6832	2-aminoethylphosphonate degradation II
THAL_RS04500	PWY-5958	acridone alkaloid biosynthesis
THAL_RS04500	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THAL_RS04500	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THAL_RS04520	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THAL_RS04520	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
THAL_RS04520	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THAL_RS04520	PWY-6936	seleno-amino acid biosynthesis
THAL_RS04520	PWY-702	L-methionine biosynthesis II
THAL_RS04525	PWY-702	L-methionine biosynthesis II
THAL_RS04530	PWY-3961	phosphopantothenate biosynthesis II
THAL_RS04535	PWY-5198	factor 420 biosynthesis
THAL_RS04535	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
THAL_RS04535	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
THAL_RS04545	PWY-6167	flavin biosynthesis II (archaea)
THAL_RS04545	PWY-6168	flavin biosynthesis III (fungi)
THAL_RS04555	PWY-5103	L-isoleucine biosynthesis III
THAL_RS04555	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THAL_RS04575	PWY-4381	fatty acid biosynthesis initiation I
THAL_RS04635	PWY-7560	methylerythritol phosphate pathway II
THAL_RS04675	PWY-3801	sucrose degradation II (sucrose synthase)
THAL_RS04675	PWY-3861	mannitol degradation II
THAL_RS04675	PWY-3881	mannitol biosynthesis
THAL_RS04675	PWY-5054	sorbitol biosynthesis I
THAL_RS04675	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
THAL_RS04675	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THAL_RS04675	PWY-5659	GDP-mannose biosynthesis
THAL_RS04675	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THAL_RS04675	PWY-621	sucrose degradation III (sucrose invertase)
THAL_RS04675	PWY-622	starch biosynthesis
THAL_RS04675	PWY-6981	chitin biosynthesis
THAL_RS04675	PWY-6992	1,5-anhydrofructose degradation
THAL_RS04675	PWY-7238	sucrose biosynthesis II
THAL_RS04675	PWY-7347	sucrose biosynthesis III
THAL_RS04675	PWY-7385	1,3-propanediol biosynthesis (engineered)
THAL_RS04675	PWY-7456	mannan degradation
THAL_RS04675	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
THAL_RS04675	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
THAL_RS04690	PWY-1042	glycolysis IV (plant cytosol)
THAL_RS04690	PWY-5484	glycolysis II (from fructose 6-phosphate)
THAL_RS04690	PWY-6901	superpathway of glucose and xylose degradation
THAL_RS04690	PWY-7003	glycerol degradation to butanol
THAL_RS04715	PWY-6123	inosine-5'-phosphate biosynthesis I
THAL_RS04715	PWY-7234	inosine-5'-phosphate biosynthesis III
THAL_RS04720	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
THAL_RS04735	PWY-3461	L-tyrosine biosynthesis II
THAL_RS04735	PWY-3462	L-phenylalanine biosynthesis II
THAL_RS04735	PWY-6120	L-tyrosine biosynthesis III
THAL_RS04735	PWY-6627	salinosporamide A biosynthesis
THAL_RS04735	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
THAL_RS04735	PWY-7626	bacilysin biosynthesis
THAL_RS04855	PWY-5101	L-isoleucine biosynthesis II
THAL_RS04855	PWY-5103	L-isoleucine biosynthesis III
THAL_RS04855	PWY-5104	L-isoleucine biosynthesis IV
THAL_RS04855	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THAL_RS04855	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THAL_RS04855	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THAL_RS04855	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THAL_RS04860	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THAL_RS04860	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THAL_RS04860	PWY-6897	thiamin salvage II
THAL_RS04860	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
THAL_RS04860	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
THAL_RS04860	PWY-7356	thiamin salvage IV (yeast)
THAL_RS04860	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THAL_RS04880	PWY-7294	xylose degradation IV
THAL_RS04880	PWY-7295	L-arabinose degradation IV
THAL_RS04905	PWY-6854	ethylene biosynthesis III (microbes)
THAL_RS04965	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THAL_RS04995	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THAL_RS04995	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THAL_RS04995	PWY-5989	stearate biosynthesis II (bacteria and plants)
THAL_RS04995	PWY-5994	palmitate biosynthesis I (animals and fungi)
THAL_RS04995	PWY-6113	superpathway of mycolate biosynthesis
THAL_RS04995	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THAL_RS04995	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THAL_RS04995	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THAL_RS04995	PWY-7663	gondoate biosynthesis (anaerobic)
THAL_RS04995	PWY-7664	oleate biosynthesis IV (anaerobic)
THAL_RS04995	PWYG-321	mycolate biosynthesis
THAL_RS05020	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
THAL_RS05040	PWY-5101	L-isoleucine biosynthesis II
THAL_RS05040	PWY-6871	3-methylbutanol biosynthesis
THAL_RS05045	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THAL_RS05045	PWY-5723	Rubisco shunt
THAL_RS05070	PWY-3821	galactose degradation III
THAL_RS05070	PWY-6317	galactose degradation I (Leloir pathway)
THAL_RS05070	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
THAL_RS05070	PWY-6527	stachyose degradation
THAL_RS05070	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
THAL_RS05070	PWY-7344	UDP-D-galactose biosynthesis
THAL_RS05115	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THAL_RS05115	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THAL_RS05130	PWY-2941	L-lysine biosynthesis II
THAL_RS05130	PWY-2942	L-lysine biosynthesis III
THAL_RS05130	PWY-5097	L-lysine biosynthesis VI
THAL_RS05140	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
THAL_RS05145	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THAL_RS05145	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THAL_RS05145	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THAL_RS05160	PWY-7560	methylerythritol phosphate pathway II
THAL_RS05220	PWY-5686	UMP biosynthesis
THAL_RS05225	PWY-6871	3-methylbutanol biosynthesis
THAL_RS05230	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
THAL_RS05405	PWY-1042	glycolysis IV (plant cytosol)
THAL_RS05405	PWY-5484	glycolysis II (from fructose 6-phosphate)
THAL_RS05405	PWY-6886	1-butanol autotrophic biosynthesis
THAL_RS05405	PWY-6901	superpathway of glucose and xylose degradation
THAL_RS05405	PWY-7003	glycerol degradation to butanol
THAL_RS05410	PWY-2301	<i>myo</i>-inositol biosynthesis
THAL_RS05410	PWY-4702	phytate degradation I
THAL_RS05410	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
THAL_RS05450	PWY-6700	queuosine biosynthesis
THAL_RS05455	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THAL_RS05455	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
THAL_RS05470	PWY-4381	fatty acid biosynthesis initiation I
THAL_RS05470	PWY-6799	fatty acid biosynthesis (plant mitochondria)
THAL_RS05470	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THAL_RS05480	PWY-101	photosynthesis light reactions
THAL_RS05480	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
THAL_RS05525	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
THAL_RS05525	PWY-5368	dimorphecolate biosynthesis
THAL_RS05525	PWY-5995	linoleate biosynthesis I (plants)
THAL_RS05525	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
THAL_RS05525	PWY-6803	phosphatidylcholine acyl editing
THAL_RS05525	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
THAL_RS05525	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
THAL_RS05525	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
THAL_RS05525	PWY-7470	phosphatidylcholine biosynthesis VII
THAL_RS05525	PWY-7618	ricinoleate biosynthesis
THAL_RS05650	PWY-6683	sulfate reduction III (assimilatory)
THAL_RS05665	PWY-5194	siroheme biosynthesis
THAL_RS05665	PWY-5441	S-methyl-L-methionine cycle
THAL_RS05665	PWY-702	L-methionine biosynthesis II
THAL_RS05665	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
THAL_RS05670	PWY-5278	sulfite oxidation III
THAL_RS05670	PWY-5340	sulfate activation for sulfonation
THAL_RS05670	PWY-6683	sulfate reduction III (assimilatory)
THAL_RS05670	PWY-6932	selenate reduction
THAL_RS05700	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
THAL_RS05705	PWY-5686	UMP biosynthesis
THAL_RS05775	PWY-7158	L-phenylalanine degradation V
THAL_RS05785	PWY-5350	thiosulfate disproportionation III (rhodanese)
THAL_RS05890	PWY-5392	reductive TCA cycle II
THAL_RS05890	PWY-5537	pyruvate fermentation to acetate V
THAL_RS05890	PWY-5538	pyruvate fermentation to acetate VI
THAL_RS05890	PWY-5690	TCA cycle II (plants and fungi)
THAL_RS05890	PWY-5913	TCA cycle VI (obligate autotrophs)
THAL_RS05890	PWY-6728	methylaspartate cycle
THAL_RS05890	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THAL_RS05890	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THAL_RS05940	PWY-3781	aerobic respiration I (cytochrome c)
THAL_RS05940	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THAL_RS05940	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THAL_RS05940	PWY-5690	TCA cycle II (plants and fungi)
THAL_RS05940	PWY-6728	methylaspartate cycle
THAL_RS05940	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THAL_RS05940	PWY-7254	TCA cycle VII (acetate-producers)
THAL_RS05940	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THAL_RS05990	PWY-5316	nicotine biosynthesis
THAL_RS05990	PWY-5381	pyridine nucleotide cycling (plants)
THAL_RS05990	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THAL_RS05990	PWY-7342	superpathway of nicotine biosynthesis
THAL_RS06070	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
THAL_RS06070	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THAL_RS06080	PWY-6854	ethylene biosynthesis III (microbes)
THAL_RS06105	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THAL_RS06135	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THAL_RS06135	PWY-6596	adenosine nucleotides degradation I
THAL_RS06135	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THAL_RS06140	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THAL_RS06140	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THAL_RS06140	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THAL_RS06140	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THAL_RS06235	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THAL_RS06235	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THAL_RS06235	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THAL_RS06235	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
THAL_RS06235	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THAL_RS06235	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THAL_RS06260	PWY-6123	inosine-5'-phosphate biosynthesis I
THAL_RS06260	PWY-6124	inosine-5'-phosphate biosynthesis II
THAL_RS06260	PWY-7234	inosine-5'-phosphate biosynthesis III
THAL_RS06265	PWY-5941	glycogen degradation II (eukaryotic)
THAL_RS06265	PWY-6731	starch degradation III
THAL_RS06265	PWY-6737	starch degradation V
THAL_RS06265	PWY-7238	sucrose biosynthesis II
THAL_RS06275	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
THAL_RS06280	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THAL_RS06280	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THAL_RS06280	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
THAL_RS06325	PWY-5941	glycogen degradation II (eukaryotic)
THAL_RS06325	PWY-6724	starch degradation II
THAL_RS06325	PWY-6737	starch degradation V
THAL_RS06325	PWY-7238	sucrose biosynthesis II
THAL_RS06330	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
THAL_RS06375	PWY-6700	queuosine biosynthesis
THAL_RS06435	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
THAL_RS06445	PWY-6167	flavin biosynthesis II (archaea)
THAL_RS06445	PWY-6168	flavin biosynthesis III (fungi)
THAL_RS06470	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THAL_RS06470	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THAL_RS06520	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THAL_RS06525	PWY-6891	thiazole biosynthesis II (Bacillus)
THAL_RS06525	PWY-6892	thiazole biosynthesis I (E. coli)
THAL_RS06550	PWY-2941	L-lysine biosynthesis II
THAL_RS06550	PWY-5097	L-lysine biosynthesis VI
THAL_RS06570	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THAL_RS06665	PWY-2201	folate transformations I
THAL_RS06675	PWY-381	nitrate reduction II (assimilatory)
THAL_RS06675	PWY-5675	nitrate reduction V (assimilatory)
THAL_RS06675	PWY-6549	L-glutamine biosynthesis III
THAL_RS06675	PWY-6963	ammonia assimilation cycle I
THAL_RS06675	PWY-6964	ammonia assimilation cycle II
THAL_RS06695	PWY-5194	siroheme biosynthesis
THAL_RS06695	PWY-5441	S-methyl-L-methionine cycle
THAL_RS06695	PWY-702	L-methionine biosynthesis II
THAL_RS06695	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
THAL_RS06700	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THAL_RS06700	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THAL_RS06725	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THAL_RS06725	PWY-6416	quinate degradation II
THAL_RS06725	PWY-6707	gallate biosynthesis
THAL_RS06745	PWY-6683	sulfate reduction III (assimilatory)
THAL_RS06775	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THAL_RS06775	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THAL_RS06790	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
THAL_RS06790	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
THAL_RS06790	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
THAL_RS06790	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
THAL_RS06790	PWY-6978	plastoquinol-9 biosynthesis II
THAL_RS06910	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THAL_RS06920	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THAL_RS06920	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THAL_RS06960	PWY-5525	D-glucuronate degradation I
THAL_RS07020	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THAL_RS07020	PWY-5723	Rubisco shunt
THAL_RS07020	PWY-6891	thiazole biosynthesis II (Bacillus)
THAL_RS07020	PWY-6892	thiazole biosynthesis I (E. coli)
THAL_RS07020	PWY-6901	superpathway of glucose and xylose degradation
THAL_RS07020	PWY-7560	methylerythritol phosphate pathway II
THAL_RS07025	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THAL_RS07025	PWY-5667	CDP-diacylglycerol biosynthesis I
THAL_RS07025	PWY-6453	stigma estolide biosynthesis
THAL_RS07025	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
THAL_RS07025	PWY-7587	oleate biosynthesis III (cyanobacteria)
THAL_RS07050	PWY-5101	L-isoleucine biosynthesis II
THAL_RS07050	PWY-5103	L-isoleucine biosynthesis III
THAL_RS07050	PWY-5104	L-isoleucine biosynthesis IV
THAL_RS07050	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THAL_RS07120	PWY-2201	folate transformations I
THAL_RS07130	PWY-3781	aerobic respiration I (cytochrome c)
THAL_RS07130	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THAL_RS07130	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THAL_RS07130	PWY-5690	TCA cycle II (plants and fungi)
THAL_RS07130	PWY-6728	methylaspartate cycle
THAL_RS07130	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THAL_RS07130	PWY-7254	TCA cycle VII (acetate-producers)
THAL_RS07130	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THAL_RS07340	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THAL_RS07340	PWY-6148	tetrahydromethanopterin biosynthesis
THAL_RS07340	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THAL_RS07340	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THAL_RS07420	PWY-5392	reductive TCA cycle II
THAL_RS07420	PWY-5537	pyruvate fermentation to acetate V
THAL_RS07420	PWY-5538	pyruvate fermentation to acetate VI
THAL_RS07420	PWY-5690	TCA cycle II (plants and fungi)
THAL_RS07420	PWY-5913	TCA cycle VI (obligate autotrophs)
THAL_RS07420	PWY-6728	methylaspartate cycle
THAL_RS07420	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THAL_RS07420	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THAL_RS07430	PWY-3221	dTDP-L-rhamnose biosynthesis II
THAL_RS07430	PWY-6808	dTDP-D-forosamine biosynthesis
THAL_RS07430	PWY-6942	dTDP-D-desosamine biosynthesis
THAL_RS07430	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
THAL_RS07430	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
THAL_RS07430	PWY-6974	dTDP-L-olivose biosynthesis
THAL_RS07430	PWY-6976	dTDP-L-mycarose biosynthesis
THAL_RS07430	PWY-7104	dTDP-L-megosamine biosynthesis
THAL_RS07430	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
THAL_RS07430	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
THAL_RS07430	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
THAL_RS07430	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
THAL_RS07430	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
THAL_RS07430	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
THAL_RS07430	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
THAL_RS07430	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
THAL_RS07430	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
THAL_RS07430	PWY-7688	THAL_RS07430
THAL_RS07440	PWY-3221	dTDP-L-rhamnose biosynthesis II
THAL_RS07440	PWY-6808	dTDP-D-forosamine biosynthesis
THAL_RS07440	PWY-6942	dTDP-D-desosamine biosynthesis
THAL_RS07440	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
THAL_RS07440	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
THAL_RS07440	PWY-6974	dTDP-L-olivose biosynthesis
THAL_RS07440	PWY-6976	dTDP-L-mycarose biosynthesis
THAL_RS07440	PWY-7104	dTDP-L-megosamine biosynthesis
THAL_RS07440	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
THAL_RS07440	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
THAL_RS07440	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
THAL_RS07440	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
THAL_RS07440	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
THAL_RS07440	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
THAL_RS07440	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
THAL_RS07440	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
THAL_RS07440	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
THAL_RS07440	PWY-7688	THAL_RS07440
THAL_RS07455	PWY-5686	UMP biosynthesis
THAL_RS07470	PWY-2301	<i>myo</i>-inositol biosynthesis
THAL_RS07470	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
THAL_RS07470	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
THAL_RS07470	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
THAL_RS07470	PWY-6664	di-myo-inositol phosphate biosynthesis
THAL_RS07475	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
THAL_RS07485	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THAL_RS07485	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
THAL_RS07485	PWY-6936	seleno-amino acid biosynthesis
THAL_RS07485	PWY-702	L-methionine biosynthesis II
THAL_RS07495	PWY-5686	UMP biosynthesis
THAL_RS07525	PWY-3781	aerobic respiration I (cytochrome c)
THAL_RS07525	PWY-4521	arsenite oxidation I (respiratory)
THAL_RS07525	PWY-6692	Fe(II) oxidation
THAL_RS07525	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THAL_RS07530	PWY-5381	pyridine nucleotide cycling (plants)
THAL_RS07530	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THAL_RS07530	PWY-6596	adenosine nucleotides degradation I
THAL_RS07530	PWY-6606	guanosine nucleotides degradation II
THAL_RS07530	PWY-6607	guanosine nucleotides degradation I
THAL_RS07530	PWY-6608	guanosine nucleotides degradation III
THAL_RS07530	PWY-7185	UTP and CTP dephosphorylation I
THAL_RS07660	PWY-3781	aerobic respiration I (cytochrome c)
THAL_RS07660	PWY-4521	arsenite oxidation I (respiratory)
THAL_RS07660	PWY-6692	Fe(II) oxidation
THAL_RS07660	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THAL_RS07675	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THAL_RS07675	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THAL_RS07680	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THAL_RS07680	PWY-5686	UMP biosynthesis
THAL_RS07680	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THAL_RS07695	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THAL_RS07710	PWY-2941	L-lysine biosynthesis II
THAL_RS07710	PWY-2942	L-lysine biosynthesis III
THAL_RS07710	PWY-5097	L-lysine biosynthesis VI
THAL_RS07710	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THAL_RS07710	PWY-6559	spermidine biosynthesis II
THAL_RS07710	PWY-6562	norspermidine biosynthesis
THAL_RS07710	PWY-7153	grixazone biosynthesis
THAL_RS07710	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THAL_RS07720	PWY-5097	L-lysine biosynthesis VI
THAL_RS07755	PWY-4381	fatty acid biosynthesis initiation I
THAL_RS07755	PWY-5743	3-hydroxypropanoate cycle
THAL_RS07755	PWY-5744	glyoxylate assimilation
THAL_RS07755	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THAL_RS07755	PWY-6679	jadomycin biosynthesis
THAL_RS07755	PWY-6722	candicidin biosynthesis
THAL_RS07755	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THAL_RS07810	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THAL_RS07820	PWY-6578	8-amino-7-oxononanoate biosynthesis III
THAL_RS07900	PWY-5958	acridone alkaloid biosynthesis
THAL_RS07900	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THAL_RS07900	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THAL_RS07910	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THAL_RS07910	PWY-6578	8-amino-7-oxononanoate biosynthesis III
THAL_RS07910	PWY-7147	8-amino-7-oxononanoate biosynthesis II
THAL_RS07915	PWY-5194	siroheme biosynthesis
THAL_RS07915	PWY-5441	S-methyl-L-methionine cycle
THAL_RS07915	PWY-702	L-methionine biosynthesis II
THAL_RS07915	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
THAL_RS07935	PWY-3341	L-proline biosynthesis III
THAL_RS07935	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THAL_RS07945	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THAL_RS07945	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THAL_RS07945	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THAL_RS07945	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
THAL_RS07950	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THAL_RS07950	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THAL_RS07975	PWY-3781	aerobic respiration I (cytochrome c)
THAL_RS07975	PWY-4521	arsenite oxidation I (respiratory)
THAL_RS07975	PWY-6692	Fe(II) oxidation
THAL_RS07975	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THAL_RS08000	PWY-3781	aerobic respiration I (cytochrome c)
THAL_RS08000	PWY-4521	arsenite oxidation I (respiratory)
THAL_RS08000	PWY-6692	Fe(II) oxidation
THAL_RS08000	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THAL_RS08015	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THAL_RS08015	PWY-6855	chitin degradation I (archaea)
THAL_RS08015	PWY-6906	chitin derivatives degradation
THAL_RS08020	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THAL_RS08035	PWY-6123	inosine-5'-phosphate biosynthesis I
THAL_RS08035	PWY-6124	inosine-5'-phosphate biosynthesis II
THAL_RS08035	PWY-7234	inosine-5'-phosphate biosynthesis III
THAL_RS08040	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THAL_RS08040	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THAL_RS08040	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THAL_RS08045	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THAL_RS08045	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THAL_RS08045	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THAL_RS08055	PWY-5101	L-isoleucine biosynthesis II
THAL_RS08055	PWY-5103	L-isoleucine biosynthesis III
THAL_RS08055	PWY-5104	L-isoleucine biosynthesis IV
THAL_RS08055	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THAL_RS08055	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THAL_RS08055	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THAL_RS08055	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THAL_RS08120	PWY-6829	tRNA methylation (yeast)
THAL_RS08120	PWY-7285	methylwyosine biosynthesis
THAL_RS08120	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
