locus-tag class description HL41_RS00005 PF00374 Nickel-dependent hydrogenase HL41_RS00040 PF01384 Phosphate transporter family HL41_RS00070 PF13335 Magnesium chelatase, subunit ChlI C-terminal HL41_RS00070 PF01078 Magnesium chelatase, subunit ChlI HL41_RS00075 PF00137 ATP synthase subunit C HL41_RS00080 PF00119 ATP synthase A chain HL41_RS00095 PF01869 BadF/BadG/BcrA/BcrD ATPase family HL41_RS00100 PF01938 TRAM domain HL41_RS00100 PF05958 tRNA (Uracil-5-)-methyltransferase HL41_RS00105 PF00588 SpoU rRNA Methylase family HL41_RS00115 PF02082 Transcriptional regulator HL41_RS00140 PF05175 Methyltransferase small domain HL41_RS00145 PF04055 Radical SAM superfamily HL41_RS00160 PF00550 Phosphopantetheine attachment site HL41_RS00165 PF00109 Beta-ketoacyl synthase, N-terminal domain HL41_RS00165 PF02801 Beta-ketoacyl synthase, C-terminal domain HL41_RS00170 PF02502 Ribose/Galactose Isomerase HL41_RS00175 PF01648 4'-phosphopantetheinyl transferase superfamily HL41_RS00180 PF03853 YjeF-related protein N-terminus HL41_RS00180 PF01256 Carbohydrate kinase HL41_RS00190 PF01478 Type IV leader peptidase family HL41_RS00190 PF06750 Bacterial Peptidase A24 N-terminal domain HL41_RS00195 PF00989 PAS fold HL41_RS00195 PF00512 His Kinase A (phospho-acceptor) domain HL41_RS00195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HL41_RS00195 PF00672 HAMP domain HL41_RS00205 PF17805 AsnC-like ligand binding domain HL41_RS00210 PF01618 MotA/TolQ/ExbB proton channel family HL41_RS00215 PF02472 Biopolymer transport protein ExbD/TolR HL41_RS00230 PF02403 Seryl-tRNA synthetase N-terminal domain HL41_RS00230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HL41_RS00235 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HL41_RS00235 PF00925 GTP cyclohydrolase II HL41_RS00240 PF03023 Lipid II flippase MurJ HL41_RS00245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HL41_RS00245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HL41_RS00245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HL41_RS00245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HL41_RS00265 PF02445 Quinolinate synthetase A protein HL41_RS00270 PF02811 PHP domain HL41_RS00275 PF00117 Glutamine amidotransferase class-I HL41_RS00275 PF06418 CTP synthase N-terminus HL41_RS00290 PF00330 Aconitase family (aconitate hydratase) HL41_RS00300 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HL41_RS00305 PF01264 Chorismate synthase HL41_RS00310 PF14010 Phosphoenolpyruvate carboxylase HL41_RS00320 PF00313 'Cold-shock' DNA-binding domain HL41_RS00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HL41_RS00330 PF00989 PAS fold HL41_RS00330 PF17203 Single cache domain 3 HL41_RS00330 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HL41_RS00335 PF02899 Phage integrase, N-terminal SAM-like domain HL41_RS00335 PF00589 Phage integrase family HL41_RS00345 PF02335 Cytochrome c552 HL41_RS00350 PF01965 DJ-1/PfpI family HL41_RS00360 PF01861 Branched-chain polyamine synthase A C-terminal domain HL41_RS00365 PF01132 Elongation factor P (EF-P) OB domain HL41_RS00365 PF08207 Elongation factor P (EF-P) KOW-like domain HL41_RS00365 PF09285 Elongation factor P, C-terminal HL41_RS00380 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS00380 PF08448 PAS fold HL41_RS00385 PF03966 Trm112p-like protein HL41_RS00395 PF06463 Molybdenum Cofactor Synthesis C HL41_RS00395 PF04055 Radical SAM superfamily HL41_RS00400 PF04468 PSP1 C-terminal conserved region HL41_RS00405 PF09334 tRNA synthetases class I (M) HL41_RS00405 PF00133 tRNA synthetases class I (I, L, M and V) HL41_RS00405 PF01588 Putative tRNA binding domain HL41_RS00410 PF01230 HIT domain HL41_RS00415 PF00364 Biotin-requiring enzyme HL41_RS00420 PF00289 Biotin carboxylase, N-terminal domain HL41_RS00420 PF02785 Biotin carboxylase C-terminal domain HL41_RS00420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HL41_RS00425 PF09936 SAM-dependent RNA methyltransferase HL41_RS00425 PF01746 tRNA (Guanine-1)-methyltransferase HL41_RS00430 PF05239 PRC-barrel domain HL41_RS00430 PF01782 RimM N-terminal domain HL41_RS00440 PF00886 Ribosomal protein S16 HL41_RS00445 PF02978 Signal peptide binding domain HL41_RS00445 PF00448 SRP54-type protein, GTPase domain HL41_RS00445 PF02881 SRP54-type protein, helical bundle domain HL41_RS00450 PF05951 Bacterial protein of unknown function (DUF882) HL41_RS00455 PF03734 L,D-transpeptidase catalytic domain HL41_RS00460 PF16363 GDP-mannose 4,6 dehydratase HL41_RS00465 PF00596 Class II Aldolase and Adducin N-terminal domain HL41_RS00470 PF00202 Aminotransferase class-III HL41_RS00475 PF02547 Queuosine biosynthesis protein HL41_RS00480 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HL41_RS00480 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HL41_RS00505 PF02954 Bacterial regulatory protein, Fis family HL41_RS00505 PF00072 Response regulator receiver domain HL41_RS00505 PF00158 Sigma-54 interaction domain HL41_RS00515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HL41_RS00515 PF00460 Flagella basal body rod protein HL41_RS00520 PF02049 Flagellar hook-basal body complex protein FliE HL41_RS00525 PF08345 Flagellar M-ring protein C-terminal HL41_RS00525 PF01514 Secretory protein of YscJ/FliF family HL41_RS00530 PF01706 FliG C-terminal domain HL41_RS00530 PF14842 FliG N-terminal domain HL41_RS00530 PF14841 FliG middle domain HL41_RS00540 PF02874 ATP synthase alpha/beta family, beta-barrel domain HL41_RS00540 PF18269 T3SS EscN ATPase C-terminal domain HL41_RS00540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HL41_RS00560 PF01475 Ferric uptake regulator family HL41_RS00570 PF06508 Queuosine biosynthesis protein QueC HL41_RS00575 PF08534 Redoxin HL41_RS00580 PF03358 NADPH-dependent FMN reductase HL41_RS00585 PF00206 Lyase HL41_RS00585 PF14698 Argininosuccinate lyase C-terminal HL41_RS00595 PF03884 DNA gyrase inhibitor YacG HL41_RS00600 PF07992 Pyridine nucleotide-disulphide oxidoreductase HL41_RS00605 PF00842 Alanine racemase, C-terminal domain HL41_RS00605 PF01168 Alanine racemase, N-terminal domain HL41_RS00610 PF02416 mttA/Hcf106 family HL41_RS00625 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase HL41_RS00625 PF01676 Metalloenzyme superfamily HL41_RS00630 PF00890 FAD binding domain HL41_RS00630 PF02910 Fumarate reductase flavoprotein C-term HL41_RS00640 PF01300 Telomere recombination HL41_RS00660 PF00902 Sec-independent protein translocase protein (TatC) HL41_RS00675 PF00216 Bacterial DNA-binding protein HL41_RS00680 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HL41_RS00680 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HL41_RS00680 PF06827 Zinc finger found in FPG and IleRS HL41_RS00700 PF00288 GHMP kinases N terminal domain HL41_RS00700 PF08544 GHMP kinases C terminal HL41_RS00705 PF14572 Phosphoribosyl synthetase-associated domain HL41_RS00705 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HL41_RS00710 PF01386 Ribosomal L25p family HL41_RS00710 PF14693 Ribosomal protein TL5, C-terminal domain HL41_RS00715 PF01195 Peptidyl-tRNA hydrolase HL41_RS00725 PF00958 GMP synthase C terminal domain HL41_RS00725 PF02540 NAD synthase HL41_RS00725 PF00117 Glutamine amidotransferase class-I HL41_RS00740 PF01783 Ribosomal L32p protein family HL41_RS00745 PF02504 Fatty acid synthesis protein HL41_RS00750 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HL41_RS00750 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HL41_RS00785 PF01980 tRNA-methyltransferase O HL41_RS00790 PF03949 Malic enzyme, NAD binding domain HL41_RS00790 PF00390 Malic enzyme, N-terminal domain HL41_RS00795 PF02127 Aminopeptidase I zinc metalloprotease (M18) HL41_RS00805 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HL41_RS00825 PF09105 Elongation factor SelB, winged helix HL41_RS00825 PF09107 Elongation factor SelB, winged helix HL41_RS00825 PF09106 Elongation factor SelB, winged helix HL41_RS00825 PF03144 Elongation factor Tu domain 2 HL41_RS00825 PF00009 Elongation factor Tu GTP binding domain HL41_RS00830 PF02092 Glycyl-tRNA synthetase beta subunit HL41_RS00830 PF05746 DALR anticodon binding domain HL41_RS00835 PF02091 Glycyl-tRNA synthetase alpha subunit HL41_RS00840 PF00586 AIR synthase related protein, N-terminal domain HL41_RS00840 PF02769 AIR synthase related protein, C-terminal domain HL41_RS00850 PF00581 Rhodanese-like domain HL41_RS00850 PF17773 UPF0176 acylphosphatase like domain HL41_RS00855 PF00924 Mechanosensitive ion channel HL41_RS00865 PF02666 Phosphatidylserine decarboxylase HL41_RS00870 PF01066 CDP-alcohol phosphatidyltransferase HL41_RS00875 PF04025 Domain of unknown function (DUF370) HL41_RS00880 PF00625 Guanylate kinase HL41_RS00885 PF00588 SpoU rRNA Methylase family HL41_RS00885 PF08032 RNA 2'-O ribose methyltransferase substrate binding HL41_RS00900 PF02577 Bifunctional nuclease HL41_RS00905 PF01336 OB-fold nucleic acid binding domain HL41_RS00905 PF00152 tRNA synthetases class II (D, K and N) HL41_RS00910 PF12704 MacB-like periplasmic core domain HL41_RS00910 PF02687 FtsX-like permease family HL41_RS00915 PF00005 ABC transporter HL41_RS00920 PF01103 Surface antigen HL41_RS00920 PF07244 Surface antigen variable number repeat HL41_RS00925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HL41_RS00925 PF00460 Flagella basal body rod protein HL41_RS00930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HL41_RS00930 PF00460 Flagella basal body rod protein HL41_RS00940 PF02107 Flagellar L-ring protein HL41_RS00945 PF02119 Flagellar P-ring protein HL41_RS00960 PF00460 Flagella basal body rod protein HL41_RS00960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HL41_RS00970 PF04052 TolB amino-terminal domain HL41_RS00970 PF07676 WD40-like Beta Propeller Repeat HL41_RS00975 PF00682 HMGL-like HL41_RS00980 PF00155 Aminotransferase class I and II HL41_RS00985 PF12390 Selenocysteine synthase N terminal HL41_RS00985 PF03841 L-seryl-tRNA selenium transferase HL41_RS00995 PF12706 Beta-lactamase superfamily domain HL41_RS00995 PF00753 Metallo-beta-lactamase superfamily HL41_RS01010 PF14821 Threonine synthase N terminus HL41_RS01010 PF00291 Pyridoxal-phosphate dependent enzyme HL41_RS01015 PF04085 rod shape-determining protein MreC HL41_RS01025 PF03717 Penicillin-binding Protein dimerisation domain HL41_RS01025 PF00905 Penicillin binding protein transpeptidase domain HL41_RS01030 PF01098 Cell cycle protein HL41_RS01045 PF00213 ATP synthase delta (OSCP) subunit HL41_RS01050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HL41_RS01050 PF00306 ATP synthase alpha/beta chain, C terminal domain HL41_RS01050 PF02874 ATP synthase alpha/beta family, beta-barrel domain HL41_RS01055 PF00231 ATP synthase HL41_RS01060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HL41_RS01060 PF02874 ATP synthase alpha/beta family, beta-barrel domain HL41_RS01065 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HL41_RS01065 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HL41_RS01070 PF01812 5-formyltetrahydrofolate cyclo-ligase family HL41_RS01075 PF01168 Alanine racemase, N-terminal domain HL41_RS01090 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HL41_RS01090 PF01926 50S ribosome-binding GTPase HL41_RS01095 PF13677 Membrane MotB of proton-channel complex MotA/MotB HL41_RS01095 PF00691 OmpA family HL41_RS01100 PF01618 MotA/TolQ/ExbB proton channel family HL41_RS01110 PF01368 DHH family HL41_RS01110 PF02833 DHHA2 domain HL41_RS01115 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HL41_RS01115 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HL41_RS01120 PF01025 GrpE HL41_RS01125 PF00012 Hsp70 protein HL41_RS01130 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HL41_RS01140 PF00849 RNA pseudouridylate synthase HL41_RS01150 PF03485 Arginyl tRNA synthetase N terminal domain HL41_RS01150 PF05746 DALR anticodon binding domain HL41_RS01150 PF00750 tRNA synthetases class I (R) HL41_RS01160 PF00583 Acetyltransferase (GNAT) family HL41_RS01165 PF04358 DsrC like protein HL41_RS01175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HL41_RS01175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HL41_RS01175 PF02770 Acyl-CoA dehydrogenase, middle domain HL41_RS01180 PF01012 Electron transfer flavoprotein domain HL41_RS01185 PF00766 Electron transfer flavoprotein FAD-binding domain HL41_RS01185 PF01012 Electron transfer flavoprotein domain HL41_RS01195 PF00152 tRNA synthetases class II (D, K and N) HL41_RS01195 PF02938 GAD domain HL41_RS01195 PF01336 OB-fold nucleic acid binding domain HL41_RS01200 PF01026 TatD related DNase HL41_RS01205 PF00950 ABC 3 transport family HL41_RS01210 PF00005 ABC transporter HL41_RS01215 PF03819 MazG nucleotide pyrophosphohydrolase domain HL41_RS01220 PF00694 Aconitase C-terminal domain HL41_RS01225 PF00330 Aconitase family (aconitate hydratase) HL41_RS01230 PF02601 Exonuclease VII, large subunit HL41_RS01230 PF13742 OB-fold nucleic acid binding domain HL41_RS01235 PF02609 Exonuclease VII small subunit HL41_RS01240 PF00348 Polyprenyl synthetase HL41_RS01245 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HL41_RS01245 PF02779 Transketolase, pyrimidine binding domain HL41_RS01245 PF02780 Transketolase, C-terminal domain HL41_RS01250 PF02824 TGS domain HL41_RS01250 PF13291 ACT domain HL41_RS01250 PF04607 Region found in RelA / SpoT proteins HL41_RS01255 PF00830 Ribosomal L28 family HL41_RS01260 PF02843 Phosphoribosylglycinamide synthetase, C domain HL41_RS01260 PF02844 Phosphoribosylglycinamide synthetase, N domain HL41_RS01260 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HL41_RS01265 PF00731 AIR carboxylase HL41_RS01280 PF01018 GTP1/OBG HL41_RS01280 PF01926 50S ribosome-binding GTPase HL41_RS01280 PF04055 Radical SAM superfamily HL41_RS01285 PF04079 Segregation and condensation complex subunit ScpB HL41_RS01295 PF00117 Glutamine amidotransferase class-I HL41_RS01300 PF00318 Ribosomal protein S2 HL41_RS01305 PF00889 Elongation factor TS HL41_RS01310 PF00696 Amino acid kinase family HL41_RS01315 PF01765 Ribosome recycling factor HL41_RS01320 PF01255 Putative undecaprenyl diphosphate synthase HL41_RS01335 PF07478 D-ala D-ala ligase C-terminus HL41_RS01335 PF01820 D-ala D-ala ligase N-terminus HL41_RS01350 PF16199 Radical_SAM C-terminal domain HL41_RS01350 PF04055 Radical SAM superfamily HL41_RS01355 PF01266 FAD dependent oxidoreductase HL41_RS01360 PF12169 DNA polymerase III subunits gamma and tau domain III HL41_RS01365 PF02575 YbaB/EbfC DNA-binding family HL41_RS01370 PF13662 Toprim domain HL41_RS01370 PF02132 RecR protein HL41_RS01380 PF02481 DNA recombination-mediator protein A HL41_RS01380 PF17782 DprA winged helix domain HL41_RS01395 PF01066 CDP-alcohol phosphatidyltransferase HL41_RS01405 PF01245 Ribosomal protein L19 HL41_RS01410 PF01351 Ribonuclease HII HL41_RS01415 PF02021 Uncharacterised protein family UPF0102 HL41_RS01425 PF00317 Ribonucleotide reductase, all-alpha domain HL41_RS01425 PF02867 Ribonucleotide reductase, barrel domain HL41_RS01425 PF03477 ATP cone domain HL41_RS01430 PF03447 Homoserine dehydrogenase, NAD binding domain HL41_RS01430 PF00742 Homoserine dehydrogenase HL41_RS01430 PF01842 ACT domain HL41_RS01440 PF01966 HD domain HL41_RS01440 PF00013 KH domain HL41_RS01440 PF12072 Domain of unknown function (DUF3552) HL41_RS01480 PF12072 Domain of unknown function (DUF3552) HL41_RS01480 PF00013 KH domain HL41_RS01480 PF01966 HD domain HL41_RS01485 PF13277 YmdB-like protein HL41_RS01490 PF01327 Polypeptide deformylase HL41_RS01495 PF07085 DRTGG domain HL41_RS01500 PF01979 Amidohydrolase family HL41_RS01510 PF13193 AMP-binding enzyme C-terminal domain HL41_RS01510 PF00501 AMP-binding enzyme HL41_RS01510 PF16177 Acetyl-coenzyme A synthetase N-terminus HL41_RS01515 PF00465 Iron-containing alcohol dehydrogenase HL41_RS01520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HL41_RS01520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HL41_RS01525 PF01872 RibD C-terminal domain HL41_RS01530 PF01066 CDP-alcohol phosphatidyltransferase HL41_RS01535 PF00829 Ribosomal prokaryotic L21 protein HL41_RS01540 PF01016 Ribosomal L27 protein HL41_RS01545 PF02660 Glycerol-3-phosphate acyltransferase HL41_RS01560 PF01171 PP-loop family HL41_RS01560 PF11734 TilS substrate C-terminal domain HL41_RS01590 PF13247 4Fe-4S dicluster domain HL41_RS01600 PF07685 CobB/CobQ-like glutamine amidotransferase domain HL41_RS01600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HL41_RS01610 PF01467 Cytidylyltransferase-like HL41_RS01620 PF01814 Hemerythrin HHE cation binding domain HL41_RS01630 PF00350 Dynamin family HL41_RS01660 PF11741 AMIN domain HL41_RS01660 PF03958 Bacterial type II/III secretion system short domain HL41_RS01660 PF07660 Secretin and TonB N terminus short domain HL41_RS01660 PF00263 Bacterial type II and III secretion system protein HL41_RS01665 PF01134 Glucose inhibited division protein A HL41_RS01670 PF02699 Preprotein translocase subunit HL41_RS01675 PF01702 Queuine tRNA-ribosyltransferase HL41_RS01680 PF00155 Aminotransferase class I and II HL41_RS01690 PF00669 Bacterial flagellin N-terminal helical region HL41_RS01690 PF00700 Bacterial flagellin C-terminal helical region HL41_RS01695 PF00440 Bacterial regulatory proteins, tetR family HL41_RS01695 PF08359 YsiA-like protein, C-terminal region HL41_RS01700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HL41_RS01705 PF00873 AcrB/AcrD/AcrF family HL41_RS01710 PF02321 Outer membrane efflux protein HL41_RS01715 PF02390 Putative methyltransferase HL41_RS01725 PF13476 AAA domain HL41_RS01740 PF02875 Mur ligase family, glutamate ligase domain HL41_RS01740 PF08245 Mur ligase middle domain HL41_RS01740 PF01225 Mur ligase family, catalytic domain HL41_RS01745 PF08448 PAS fold HL41_RS01745 PF00512 His Kinase A (phospho-acceptor) domain HL41_RS01745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HL41_RS01745 PF13188 PAS domain HL41_RS01745 PF00072 Response regulator receiver domain HL41_RS01750 PF02954 Bacterial regulatory protein, Fis family HL41_RS01750 PF00072 Response regulator receiver domain HL41_RS01750 PF00158 Sigma-54 interaction domain HL41_RS01760 PF08459 UvrC Helix-hairpin-helix N-terminal HL41_RS01760 PF02151 UvrB/uvrC motif HL41_RS01760 PF01541 GIY-YIG catalytic domain HL41_RS01765 PF00180 Isocitrate/isopropylmalate dehydrogenase HL41_RS01770 PF04715 Anthranilate synthase component I, N terminal region HL41_RS01770 PF00425 chorismate binding enzyme HL41_RS01780 PF01252 Signal peptidase (SPase) II HL41_RS01785 PF06827 Zinc finger found in FPG and IleRS HL41_RS01785 PF08264 Anticodon-binding domain of tRNA HL41_RS01785 PF00133 tRNA synthetases class I (I, L, M and V) HL41_RS01790 PF01134 Glucose inhibited division protein A HL41_RS01790 PF13932 GidA associated domain HL41_RS01805 PF04545 Sigma-70, region 4 HL41_RS01805 PF04539 Sigma-70 region 3 HL41_RS01805 PF04542 Sigma-70 region 2 HL41_RS01805 PF00140 Sigma-70 factor, region 1.2 HL41_RS01805 PF03979 Sigma-70 factor, region 1.1 HL41_RS01805 PF04546 Sigma-70, non-essential region HL41_RS01810 PF00580 UvrD/REP helicase N-terminal domain HL41_RS01810 PF13361 UvrD-like helicase C-terminal domain HL41_RS01830 PF00437 Type II/IV secretion system protein HL41_RS01835 PF00437 Type II/IV secretion system protein HL41_RS01845 PF00483 Nucleotidyl transferase HL41_RS01850 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HL41_RS01850 PF00271 Helicase conserved C-terminal domain HL41_RS01850 PF17764 3′ DNA-binding domain (3′BD) HL41_RS01850 PF18074 Primosomal protein N C-terminal domain HL41_RS01850 PF04851 Type III restriction enzyme, res subunit HL41_RS01860 PF06689 ClpX C4-type zinc finger HL41_RS01860 PF10431 C-terminal, D2-small domain, of ClpB protein HL41_RS01860 PF07724 AAA domain (Cdc48 subfamily) HL41_RS01865 PF00486 Transcriptional regulatory protein, C terminal HL41_RS01865 PF00072 Response regulator receiver domain HL41_RS01865 PF01627 Hpt domain HL41_RS01870 PF04055 Radical SAM superfamily HL41_RS01870 PF13186 Iron-sulfur cluster-binding domain HL41_RS01875 PF01808 AICARFT/IMPCHase bienzyme HL41_RS01875 PF02142 MGS-like domain HL41_RS01885 PF01488 Shikimate / quinate 5-dehydrogenase HL41_RS01885 PF08501 Shikimate dehydrogenase substrate binding domain HL41_RS01885 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HL41_RS01890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HL41_RS01895 PF01202 Shikimate kinase HL41_RS01900 PF00753 Metallo-beta-lactamase superfamily HL41_RS01905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HL41_RS01905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HL41_RS01905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HL41_RS01915 PF02811 PHP domain HL41_RS01915 PF14716 Helix-hairpin-helix domain HL41_RS01915 PF14791 DNA polymerase beta thumb HL41_RS01920 PF17755 UvrA DNA-binding domain HL41_RS01920 PF00005 ABC transporter HL41_RS01920 PF17760 UvrA interaction domain HL41_RS01930 PF00156 Phosphoribosyl transferase domain HL41_RS01935 PF00204 DNA gyrase B HL41_RS01935 PF00986 DNA gyrase B subunit, carboxyl terminus HL41_RS01935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HL41_RS01935 PF01751 Toprim domain HL41_RS01940 PF00712 DNA polymerase III beta subunit, N-terminal domain HL41_RS01940 PF02767 DNA polymerase III beta subunit, central domain HL41_RS01940 PF02768 DNA polymerase III beta subunit, C-terminal domain HL41_RS01945 PF07992 Pyridine nucleotide-disulphide oxidoreductase HL41_RS01950 PF17676 LD-carboxypeptidase C-terminal domain HL41_RS01950 PF02016 LD-carboxypeptidase N-terminal domain HL41_RS01955 PF03309 Type III pantothenate kinase HL41_RS01965 PF01435 Peptidase family M48 HL41_RS01970 PF01842 ACT domain HL41_RS01970 PF00800 Prephenate dehydratase HL41_RS01970 PF01817 Chorismate mutase type II HL41_RS01980 PF08529 NusA N-terminal domain HL41_RS01980 PF13184 NusA-like KH domain HL41_RS01980 PF00575 S1 RNA binding domain HL41_RS01985 PF17384 RimP C-terminal SH3 domain HL41_RS01985 PF02576 RimP N-terminal domain HL41_RS02000 PF02954 Bacterial regulatory protein, Fis family HL41_RS02000 PF00072 Response regulator receiver domain HL41_RS02000 PF00158 Sigma-54 interaction domain HL41_RS02005 PF03601 Conserved hypothetical protein 698 HL41_RS02030 PF07690 Major Facilitator Superfamily HL41_RS02040 PF00310 Glutamine amidotransferases class-II HL41_RS02045 PF13187 4Fe-4S dicluster domain HL41_RS02045 PF01645 Conserved region in glutamate synthase HL41_RS02050 PF06505 Activator of aromatic catabolism HL41_RS02050 PF02830 V4R domain HL41_RS02050 PF02954 Bacterial regulatory protein, Fis family HL41_RS02050 PF00158 Sigma-54 interaction domain HL41_RS02055 PF03951 Glutamine synthetase, beta-Grasp domain HL41_RS02055 PF00120 Glutamine synthetase, catalytic domain HL41_RS02060 PF02954 Bacterial regulatory protein, Fis family HL41_RS02060 PF01590 GAF domain HL41_RS02060 PF00158 Sigma-54 interaction domain HL41_RS02065 PF02540 NAD synthase HL41_RS02065 PF00958 GMP synthase C terminal domain HL41_RS02065 PF00117 Glutamine amidotransferase class-I HL41_RS02070 PF00543 Nitrogen regulatory protein P-II HL41_RS02075 PF00909 Ammonium Transporter Family HL41_RS02085 PF02417 Chromate transporter HL41_RS02095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HL41_RS02100 PF13520 Amino acid permease HL41_RS02125 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HL41_RS02140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HL41_RS02145 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HL41_RS02145 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HL41_RS02150 PF00037 4Fe-4S binding domain HL41_RS02155 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HL41_RS02160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HL41_RS02160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HL41_RS02170 PF00005 ABC transporter HL41_RS02170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HL41_RS02175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HL41_RS02175 PF00005 ABC transporter HL41_RS02180 PF00308 Bacterial dnaA protein HL41_RS02180 PF11638 DnaA N-terminal domain HL41_RS02180 PF08299 Bacterial dnaA protein helix-turn-helix HL41_RS02185 PF02913 FAD linked oxidases, C-terminal domain HL41_RS02185 PF01565 FAD binding domain HL41_RS02190 PF01171 PP-loop family HL41_RS02195 PF02535 ZIP Zinc transporter HL41_RS02200 PF02954 Bacterial regulatory protein, Fis family HL41_RS02200 PF00072 Response regulator receiver domain HL41_RS02200 PF00158 Sigma-54 interaction domain HL41_RS02205 PF00814 Glycoprotease family HL41_RS02210 PF13580 SIS domain HL41_RS02220 PF00563 EAL domain HL41_RS02220 PF12792 CSS motif domain associated with EAL HL41_RS02225 PF00465 Iron-containing alcohol dehydrogenase HL41_RS02250 PF00342 Phosphoglucose isomerase HL41_RS02255 PF00490 Delta-aminolevulinic acid dehydratase HL41_RS02260 PF05036 Sporulation related domain HL41_RS02260 PF03330 Lytic transglycolase HL41_RS02265 PF14622 Ribonuclease-III-like HL41_RS02265 PF00035 Double-stranded RNA binding motif HL41_RS02275 PF01926 50S ribosome-binding GTPase HL41_RS02275 PF07650 KH domain HL41_RS02280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HL41_RS02280 PF08447 PAS fold HL41_RS02280 PF13426 PAS domain HL41_RS02285 PF01475 Ferric uptake regulator family HL41_RS02290 PF00899 ThiF family HL41_RS02300 PF04055 Radical SAM superfamily HL41_RS02300 PF06463 Molybdenum Cofactor Synthesis C HL41_RS02305 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain HL41_RS02305 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 HL41_RS02310 PF02322 Cytochrome bd terminal oxidase subunit II HL41_RS02315 PF01654 Cytochrome bd terminal oxidase subunit I HL41_RS02330 PF00563 EAL domain HL41_RS02330 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS02330 PF03707 Bacterial signalling protein N terminal repeat HL41_RS02335 PF00391 PEP-utilising enzyme, mobile domain HL41_RS02335 PF00224 Pyruvate kinase, barrel domain HL41_RS02335 PF02887 Pyruvate kinase, alpha/beta domain HL41_RS02350 PF01259 SAICAR synthetase HL41_RS02360 PF08245 Mur ligase middle domain HL41_RS02360 PF02875 Mur ligase family, glutamate ligase domain HL41_RS02385 PF00912 Transglycosylase HL41_RS02390 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase HL41_RS02390 PF01676 Metalloenzyme superfamily HL41_RS02400 PF01891 Cobalt uptake substrate-specific transmembrane region HL41_RS02410 PF02361 Cobalt transport protein HL41_RS02415 PF00005 ABC transporter HL41_RS02425 PF03773 Predicted permease HL41_RS02430 PF01022 Bacterial regulatory protein, arsR family HL41_RS02435 PF02558 Ketopantoate reductase PanE/ApbA HL41_RS02435 PF08546 Ketopantoate reductase PanE/ApbA C terminal HL41_RS02445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HL41_RS02445 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HL41_RS02465 PF00226 DnaJ domain HL41_RS02465 PF01556 DnaJ C terminal domain HL41_RS02465 PF00684 DnaJ central domain HL41_RS02470 PF03705 CheR methyltransferase, all-alpha domain HL41_RS02470 PF01739 CheR methyltransferase, SAM binding domain HL41_RS02475 PF01339 CheB methylesterase HL41_RS02475 PF00072 Response regulator receiver domain HL41_RS02480 PF00072 Response regulator receiver domain HL41_RS02500 PF00072 Response regulator receiver domain HL41_RS02505 PF04542 Sigma-70 region 2 HL41_RS02505 PF04539 Sigma-70 region 3 HL41_RS02505 PF04545 Sigma-70, region 4 HL41_RS02510 PF10609 NUBPL iron-transfer P-loop NTPase HL41_RS02515 PF00448 SRP54-type protein, GTPase domain HL41_RS02520 PF00771 FHIPEP family HL41_RS02525 PF01312 FlhB HrpN YscU SpaS Family HL41_RS02530 PF01311 Bacterial export proteins, family 1 HL41_RS02535 PF01313 Bacterial export proteins, family 3 HL41_RS02540 PF00813 FliP family HL41_RS02550 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HL41_RS02555 PF02154 Flagellar motor switch protein FliM HL41_RS02555 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HL41_RS02575 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HL41_RS02580 PF02578 Multi-copper polyphenol oxidoreductase laccase HL41_RS02585 PF01725 Ham1 family HL41_RS02590 PF03725 3' exoribonuclease family, domain 2 HL41_RS02590 PF01138 3' exoribonuclease family, domain 1 HL41_RS02605 PF02774 Semialdehyde dehydrogenase, dimerisation domain HL41_RS02605 PF01118 Semialdehyde dehydrogenase, NAD binding domain HL41_RS02610 PF08032 RNA 2'-O ribose methyltransferase substrate binding HL41_RS02610 PF00588 SpoU rRNA Methylase family HL41_RS02615 PF17746 SfsA N-terminal OB domain HL41_RS02615 PF03749 Sugar fermentation stimulation protein RE domain HL41_RS02630 PF01925 Sulfite exporter TauE/SafE HL41_RS02635 PF10672 S-adenosylmethionine-dependent methyltransferase HL41_RS02635 PF17785 PUA-like domain HL41_RS02645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HL41_RS02645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HL41_RS02645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HL41_RS02645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HL41_RS02655 PF02457 DisA bacterial checkpoint controller nucleotide-binding HL41_RS02660 PF00809 Pterin binding enzyme HL41_RS02665 PF01434 Peptidase family M41 HL41_RS02665 PF00004 ATPase family associated with various cellular activities (AAA) HL41_RS02665 PF06480 FtsH Extracellular HL41_RS02665 PF17862 AAA+ lid domain HL41_RS02675 PF12399 Branched-chain amino acid ATP-binding cassette transporter HL41_RS02675 PF00005 ABC transporter HL41_RS02680 PF00309 Sigma-54 factor, Activator interacting domain (AID) HL41_RS02680 PF04963 Sigma-54 factor, core binding domain HL41_RS02680 PF04552 Sigma-54, DNA binding domain HL41_RS02700 PF01661 Macro domain HL41_RS02710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HL41_RS02710 PF02743 Cache domain HL41_RS02710 PF00672 HAMP domain HL41_RS02725 PF00672 HAMP domain HL41_RS02725 PF17200 Single Cache domain 2 HL41_RS02725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HL41_RS02735 PF05227 CHASE3 domain HL41_RS02735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HL41_RS02735 PF00672 HAMP domain HL41_RS02740 PF08338 Domain of unknown function (DUF1731) HL41_RS02740 PF01370 NAD dependent epimerase/dehydratase family HL41_RS02750 PF00551 Formyl transferase HL41_RS02750 PF02911 Formyl transferase, C-terminal domain HL41_RS02755 PF07549 SecD/SecF GG Motif HL41_RS02755 PF02355 Protein export membrane protein HL41_RS02760 PF01297 Zinc-uptake complex component A periplasmic HL41_RS02780 PF00005 ABC transporter HL41_RS02785 PF01458 Uncharacterized protein family (UPF0051) HL41_RS02790 PF00155 Aminotransferase class I and II HL41_RS02795 PF00563 EAL domain HL41_RS02795 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS02795 PF08448 PAS fold HL41_RS02835 PF01370 NAD dependent epimerase/dehydratase family HL41_RS02840 PF00571 CBS domain HL41_RS02840 PF03471 Transporter associated domain HL41_RS02840 PF03741 Integral membrane protein TerC family HL41_RS02845 PF00795 Carbon-nitrogen hydrolase HL41_RS02850 PF02441 Flavoprotein HL41_RS02855 PF00075 RNase H HL41_RS02860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HL41_RS02860 PF00672 HAMP domain HL41_RS02860 PF02743 Cache domain HL41_RS02885 PF01584 CheW-like domain HL41_RS02890 PF07194 P2 response regulator binding domain HL41_RS02890 PF01627 Hpt domain HL41_RS02890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HL41_RS02890 PF02895 Signal transducing histidine kinase, homodimeric domain HL41_RS02890 PF01584 CheW-like domain HL41_RS02895 PF00892 EamA-like transporter family HL41_RS02900 PF00849 RNA pseudouridylate synthase HL41_RS02900 PF01479 S4 domain HL41_RS02920 PF01171 PP-loop family HL41_RS02935 PF01895 PhoU domain HL41_RS02940 PF10502 Signal peptidase, peptidase S26 HL41_RS02945 PF00679 Elongation factor G C-terminus HL41_RS02945 PF06421 GTP-binding protein LepA C-terminus HL41_RS02945 PF03144 Elongation factor Tu domain 2 HL41_RS02945 PF00009 Elongation factor Tu GTP binding domain HL41_RS02955 PF00005 ABC transporter HL41_RS02970 PF00709 Adenylosuccinate synthetase HL41_RS02975 PF02785 Biotin carboxylase C-terminal domain HL41_RS02975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HL41_RS02975 PF00289 Biotin carboxylase, N-terminal domain HL41_RS02980 PF17848 Acetyl-coA carboxylase zinc finger domain HL41_RS02980 PF01039 Carboxyl transferase domain HL41_RS02995 PF02142 MGS-like domain HL41_RS02995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HL41_RS02995 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HL41_RS03010 PF01649 Ribosomal protein S20 HL41_RS03020 PF00749 tRNA synthetases class I (E and Q), catalytic domain HL41_RS03025 PF01875 Memo-like protein HL41_RS03030 PF02348 Cytidylyltransferase HL41_RS03035 PF04760 Translation initiation factor IF-2, N-terminal region HL41_RS03035 PF11987 Translation-initiation factor 2 HL41_RS03035 PF00009 Elongation factor Tu GTP binding domain HL41_RS03045 PF02033 Ribosome-binding factor A HL41_RS03055 PF09157 Pseudouridine synthase II TruB, C-terminal HL41_RS03055 PF01509 TruB family pseudouridylate synthase (N terminal domain) HL41_RS03055 PF16198 tRNA pseudouridylate synthase B C-terminal domain HL41_RS03065 PF01914 MarC family integral membrane protein HL41_RS03070 PF13520 Amino acid permease HL41_RS03080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HL41_RS03085 PF00005 ABC transporter HL41_RS03085 PF02687 FtsX-like permease family HL41_RS03085 PF12704 MacB-like periplasmic core domain HL41_RS03090 PF12704 MacB-like periplasmic core domain HL41_RS03090 PF02687 FtsX-like permease family HL41_RS03090 PF00005 ABC transporter HL41_RS03095 PF02687 FtsX-like permease family HL41_RS03095 PF12704 MacB-like periplasmic core domain HL41_RS03095 PF00005 ABC transporter HL41_RS03100 PF00580 UvrD/REP helicase N-terminal domain HL41_RS03100 PF13361 UvrD-like helicase C-terminal domain HL41_RS03110 PF17757 UvrB interaction domain HL41_RS03110 PF03461 TRCF domain HL41_RS03110 PF00271 Helicase conserved C-terminal domain HL41_RS03110 PF00270 DEAD/DEAH box helicase HL41_RS03110 PF02559 CarD-like/TRCF domain HL41_RS03115 PF00563 EAL domain HL41_RS03115 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS03115 PF03707 Bacterial signalling protein N terminal repeat HL41_RS03120 PF06470 SMC proteins Flexible Hinge Domain HL41_RS03120 PF02463 RecF/RecN/SMC N terminal domain HL41_RS03130 PF08264 Anticodon-binding domain of tRNA HL41_RS03130 PF00133 tRNA synthetases class I (I, L, M and V) HL41_RS03130 PF10458 Valyl tRNA synthetase tRNA binding arm HL41_RS03135 PF00696 Amino acid kinase family HL41_RS03140 PF07883 Cupin domain HL41_RS03160 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HL41_RS03195 PF04055 Radical SAM superfamily HL41_RS03200 PF04545 Sigma-70, region 4 HL41_RS03200 PF04542 Sigma-70 region 2 HL41_RS03200 PF00140 Sigma-70 factor, region 1.2 HL41_RS03220 PF01595 Cyclin M transmembrane N-terminal domain HL41_RS03220 PF03471 Transporter associated domain HL41_RS03220 PF00571 CBS domain HL41_RS03225 PF01595 Cyclin M transmembrane N-terminal domain HL41_RS03225 PF00571 CBS domain HL41_RS03225 PF03471 Transporter associated domain HL41_RS03245 PF00582 Universal stress protein family HL41_RS03260 PF08753 NikR C terminal nickel binding domain HL41_RS03260 PF01402 Ribbon-helix-helix protein, copG family HL41_RS03265 PF13193 AMP-binding enzyme C-terminal domain HL41_RS03265 PF00501 AMP-binding enzyme HL41_RS03270 PF17876 Cold shock domain HL41_RS03270 PF08206 Ribonuclease B OB domain HL41_RS03270 PF00773 RNB domain HL41_RS03270 PF00575 S1 RNA binding domain HL41_RS03280 PF02934 GatB/GatE catalytic domain HL41_RS03280 PF02637 GatB domain HL41_RS03285 PF01008 Initiation factor 2 subunit family HL41_RS03290 PF06971 Putative DNA-binding protein N-terminus HL41_RS03290 PF02629 CoA binding domain HL41_RS03295 PF00692 dUTPase HL41_RS03310 PF00707 Translation initiation factor IF-3, C-terminal domain HL41_RS03310 PF05198 Translation initiation factor IF-3, N-terminal domain HL41_RS03315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HL41_RS03315 PF03129 Anticodon binding domain HL41_RS03315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HL41_RS03325 PF00132 Bacterial transferase hexapeptide (six repeats) HL41_RS03325 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HL41_RS03345 PF14437 MafB19-like deaminase HL41_RS03350 PF02401 LytB protein HL41_RS03355 PF04002 RadC-like JAB domain HL41_RS03370 PF00793 DAHP synthetase I family HL41_RS03375 PF18693 TRAM domain HL41_RS03375 PF00919 Uncharacterized protein family UPF0004 HL41_RS03375 PF04055 Radical SAM superfamily HL41_RS03385 PF00764 Arginosuccinate synthase HL41_RS03390 PF00923 Transaldolase/Fructose-6-phosphate aldolase HL41_RS03395 PF01569 PAP2 superfamily HL41_RS03400 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase HL41_RS03405 PF18073 Rubredoxin metal binding domain HL41_RS03415 PF00977 Histidine biosynthesis protein HL41_RS03430 PF00334 Nucleoside diphosphate kinase HL41_RS03435 PF00586 AIR synthase related protein, N-terminal domain HL41_RS03435 PF02769 AIR synthase related protein, C-terminal domain HL41_RS03440 PF00011 Hsp20/alpha crystallin family HL41_RS03445 PF07724 AAA domain (Cdc48 subfamily) HL41_RS03445 PF17871 AAA lid domain HL41_RS03445 PF10431 C-terminal, D2-small domain, of ClpB protein HL41_RS03445 PF02861 Clp amino terminal domain, pathogenicity island component HL41_RS03445 PF00004 ATPase family associated with various cellular activities (AAA) HL41_RS03455 PF03668 P-loop ATPase protein family HL41_RS03460 PF00583 Acetyltransferase (GNAT) family HL41_RS03470 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HL41_RS03470 PF00391 PEP-utilising enzyme, mobile domain HL41_RS03470 PF02896 PEP-utilising enzyme, TIM barrel domain HL41_RS03475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HL41_RS03475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HL41_RS03480 PF01029 NusB family HL41_RS03485 PF02224 Cytidylate kinase HL41_RS03495 PF01380 SIS domain HL41_RS03510 PF13167 GTP-binding GTPase N-terminal HL41_RS03510 PF01926 50S ribosome-binding GTPase HL41_RS03510 PF16360 GTP-binding GTPase Middle Region HL41_RS03520 PF00579 tRNA synthetases class I (W and Y) HL41_RS03520 PF01479 S4 domain HL41_RS03525 PF02602 Uroporphyrinogen-III synthase HemD HL41_RS03525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HL41_RS03530 PF03900 Porphobilinogen deaminase, C-terminal domain HL41_RS03530 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HL41_RS03540 PF02769 AIR synthase related protein, C-terminal domain HL41_RS03540 PF00586 AIR synthase related protein, N-terminal domain HL41_RS03540 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HL41_RS03545 PF00815 Histidinol dehydrogenase HL41_RS03550 PF00365 Phosphofructokinase HL41_RS03555 PF06480 FtsH Extracellular HL41_RS03555 PF17862 AAA+ lid domain HL41_RS03555 PF00004 ATPase family associated with various cellular activities (AAA) HL41_RS03555 PF01434 Peptidase family M41 HL41_RS03565 PF14489 QueF-like protein HL41_RS03570 PF12826 Helix-hairpin-helix motif HL41_RS03570 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HL41_RS03570 PF03120 NAD-dependent DNA ligase OB-fold domain HL41_RS03570 PF01653 NAD-dependent DNA ligase adenylation domain HL41_RS03570 PF00533 BRCA1 C Terminus (BRCT) domain HL41_RS03575 PF00579 tRNA synthetases class I (W and Y) HL41_RS03590 PF01292 Prokaryotic cytochrome b561 HL41_RS03605 PF00501 AMP-binding enzyme HL41_RS03605 PF14535 AMP-binding enzyme C-terminal domain HL41_RS03615 PF00270 DEAD/DEAH box helicase HL41_RS03615 PF00271 Helicase conserved C-terminal domain HL41_RS03620 PF00009 Elongation factor Tu GTP binding domain HL41_RS03620 PF00679 Elongation factor G C-terminus HL41_RS03620 PF14492 Elongation Factor G, domain II HL41_RS03620 PF03764 Elongation factor G, domain IV HL41_RS03625 PF00994 Probable molybdopterin binding domain HL41_RS03635 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component HL41_RS03640 PF01869 BadF/BadG/BcrA/BcrD ATPase family HL41_RS03645 PF03466 LysR substrate binding domain HL41_RS03645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HL41_RS03655 PF01206 Sulfurtransferase TusA HL41_RS03675 PF08666 SAF domain HL41_RS03675 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HL41_RS03680 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HL41_RS03680 PF08666 SAF domain HL41_RS03685 PF11146 Protein of unknown function (DUF2905) HL41_RS03690 PF04055 Radical SAM superfamily HL41_RS03705 PF01063 Amino-transferase class IV HL41_RS03725 PF00176 SNF2 family N-terminal domain HL41_RS03725 PF00271 Helicase conserved C-terminal domain HL41_RS03730 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HL41_RS03735 PF01553 Acyltransferase HL41_RS03735 PF00501 AMP-binding enzyme HL41_RS03740 PF01545 Cation efflux family HL41_RS03740 PF16916 Dimerisation domain of Zinc Transporter HL41_RS03745 PF04029 2-phosphosulpholactate phosphatase HL41_RS03780 PF00176 SNF2 family N-terminal domain HL41_RS03780 PF00271 Helicase conserved C-terminal domain HL41_RS03785 PF03783 Curli production assembly/transport component CsgG HL41_RS03795 PF10627 Curli assembly protein CsgE HL41_RS03825 PF00795 Carbon-nitrogen hydrolase HL41_RS03825 PF02540 NAD synthase HL41_RS03830 PF03951 Glutamine synthetase, beta-Grasp domain HL41_RS03830 PF00120 Glutamine synthetase, catalytic domain HL41_RS03840 PF01590 GAF domain HL41_RS03840 PF02954 Bacterial regulatory protein, Fis family HL41_RS03840 PF00158 Sigma-54 interaction domain HL41_RS03850 PF10609 NUBPL iron-transfer P-loop NTPase HL41_RS03865 PF07196 Flagellin hook IN motif HL41_RS03865 PF07195 Flagellar hook-associated protein 2 C-terminus HL41_RS03865 PF02465 Flagellar hook-associated protein 2 N-terminus HL41_RS03870 PF02561 Flagellar protein FliS HL41_RS03885 PF08448 PAS fold HL41_RS03885 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS03900 PF08029 HisG, C-terminal domain HL41_RS03900 PF01634 ATP phosphoribosyltransferase HL41_RS03905 PF01502 Phosphoribosyl-AMP cyclohydrolase HL41_RS03910 PF00218 Indole-3-glycerol phosphate synthase HL41_RS03915 PF00468 Ribosomal protein L34 HL41_RS03920 PF00825 Ribonuclease P HL41_RS03925 PF01809 Putative membrane protein insertion efficiency factor HL41_RS03930 PF02096 60Kd inner membrane protein HL41_RS03930 PF14849 YidC periplasmic domain HL41_RS03940 PF10396 GTP-binding protein TrmE N-terminus HL41_RS03940 PF01926 50S ribosome-binding GTPase HL41_RS03940 PF12631 MnmE helical domain HL41_RS03945 PF08543 Phosphomethylpyrimidine kinase HL41_RS03950 PF02686 Glu-tRNAGln amidotransferase C subunit HL41_RS03955 PF01425 Amidase HL41_RS03960 PF17762 HTH domain found in ParB protein HL41_RS03960 PF02195 ParB-like nuclease domain HL41_RS03970 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HL41_RS03970 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HL41_RS03975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HL41_RS03990 PF00994 Probable molybdopterin binding domain HL41_RS03990 PF18146 Damage-inducible protein CinA KH domain HL41_RS03990 PF02464 Competence-damaged protein HL41_RS03995 PF04608 Phosphatidylglycerophosphatase A HL41_RS04005 PF00999 Sodium/hydrogen exchanger family HL41_RS04005 PF02254 TrkA-N domain HL41_RS04015 PF02272 DHHA1 domain HL41_RS04015 PF12627 Probable RNA and SrmB- binding site of polymerase A HL41_RS04015 PF01368 DHH family HL41_RS04015 PF00571 CBS domain HL41_RS04015 PF01743 Poly A polymerase head domain HL41_RS04020 PF00589 Phage integrase family HL41_RS04020 PF02899 Phage integrase, N-terminal SAM-like domain HL41_RS04030 PF00149 Calcineurin-like phosphoesterase HL41_RS04050 PF00491 Arginase family HL41_RS04055 PF02675 S-adenosylmethionine decarboxylase HL41_RS04065 PF01925 Sulfite exporter TauE/SafE HL41_RS04070 PF17805 AsnC-like ligand binding domain HL41_RS04075 PF04539 Sigma-70 region 3 HL41_RS04075 PF04546 Sigma-70, non-essential region HL41_RS04075 PF04542 Sigma-70 region 2 HL41_RS04075 PF04539 Sigma-70 region 3 HL41_RS04075 PF04545 Sigma-70, region 4 HL41_RS04075 PF03979 Sigma-70 factor, region 1.1 HL41_RS04075 PF03979 Sigma-70 factor, region 1.1 HL41_RS04075 PF04545 Sigma-70, region 4 HL41_RS04075 PF04542 Sigma-70 region 2 HL41_RS04075 PF04546 Sigma-70, non-essential region HL41_RS04075 PF00140 Sigma-70 factor, region 1.2 HL41_RS04075 PF00140 Sigma-70 factor, region 1.2 HL41_RS04085 PF00488 MutS domain V HL41_RS04085 PF01713 Smr domain HL41_RS04090 PF01165 Ribosomal protein S21 HL41_RS04095 PF00437 Type II/IV secretion system protein HL41_RS04095 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HL41_RS04100 PF02634 FdhD/NarQ family HL41_RS04105 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HL41_RS04105 PF00753 Metallo-beta-lactamase superfamily HL41_RS04105 PF10996 Beta-Casp domain HL41_RS04110 PF08745 PINc domain ribonuclease HL41_RS04120 PF08264 Anticodon-binding domain of tRNA HL41_RS04120 PF00133 tRNA synthetases class I (I, L, M and V) HL41_RS04120 PF13603 Leucyl-tRNA synthetase, Domain 2 HL41_RS04120 PF09334 tRNA synthetases class I (M) HL41_RS04130 PF00180 Isocitrate/isopropylmalate dehydrogenase HL41_RS04135 PF13654 AAA domain HL41_RS04135 PF05362 Lon protease (S16) C-terminal proteolytic domain HL41_RS04145 PF00155 Aminotransferase class I and II HL41_RS04155 PF02472 Biopolymer transport protein ExbD/TolR HL41_RS04165 PF01950 Fructose-1,6-bisphosphatase HL41_RS04170 PF01312 FlhB HrpN YscU SpaS Family HL41_RS04175 PF01597 Glycine cleavage H-protein HL41_RS04180 PF00698 Acyl transferase domain HL41_RS04205 PF02580 D-Tyr-tRNA(Tyr) deacylase HL41_RS04215 PF00534 Glycosyl transferases group 1 HL41_RS04215 PF00862 Sucrose synthase HL41_RS04220 PF00534 Glycosyl transferases group 1 HL41_RS04230 PF02358 Trehalose-phosphatase HL41_RS04240 PF00982 Glycosyltransferase family 20 HL41_RS04255 PF02146 Sir2 family HL41_RS04265 PF01435 Peptidase family M48 HL41_RS04270 PF00664 ABC transporter transmembrane region HL41_RS04270 PF00005 ABC transporter HL41_RS04280 PF08645 Polynucleotide kinase 3 phosphatase HL41_RS04285 PF10150 Ribonuclease E/G family HL41_RS04285 PF00575 S1 RNA binding domain HL41_RS04290 PF01048 Phosphorylase superfamily HL41_RS04295 PF01138 3' exoribonuclease family, domain 1 HL41_RS04295 PF00013 KH domain HL41_RS04295 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HL41_RS04295 PF03725 3' exoribonuclease family, domain 2 HL41_RS04295 PF00575 S1 RNA binding domain HL41_RS04300 PF03916 Polysulphide reductase, NrfD HL41_RS04305 PF13247 4Fe-4S dicluster domain HL41_RS04310 PF01568 Molydopterin dinucleotide binding domain HL41_RS04310 PF00384 Molybdopterin oxidoreductase HL41_RS04310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HL41_RS04315 PF05140 ResB-like family HL41_RS04320 PF03572 Peptidase family S41 HL41_RS04320 PF13180 PDZ domain HL41_RS04325 PF02163 Peptidase family M50 HL41_RS04340 PF00005 ABC transporter HL41_RS04350 PF00881 Nitroreductase family HL41_RS04355 PF00578 AhpC/TSA family HL41_RS04360 PF00005 ABC transporter HL41_RS04365 PF00528 Binding-protein-dependent transport system inner membrane component HL41_RS04370 PF12849 PBP superfamily domain HL41_RS04375 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HL41_RS04385 PF01230 HIT domain HL41_RS04400 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HL41_RS04405 PF03477 ATP cone domain HL41_RS04410 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HL41_RS04410 PF01189 16S rRNA methyltransferase RsmB/F HL41_RS04410 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HL41_RS04415 PF13419 Haloacid dehalogenase-like hydrolase HL41_RS04420 PF02594 Uncharacterised ACR, YggU family COG1872 HL41_RS04425 PF02325 YGGT family HL41_RS04430 PF02562 PhoH-like protein HL41_RS04440 PF02743 Cache domain HL41_RS04440 PF00672 HAMP domain HL41_RS04440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HL41_RS04445 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS04455 PF00118 TCP-1/cpn60 chaperonin family HL41_RS04460 PF00166 Chaperonin 10 Kd subunit HL41_RS04470 PF02190 ATP-dependent protease La (LON) substrate-binding domain HL41_RS04470 PF00004 ATPase family associated with various cellular activities (AAA) HL41_RS04470 PF05362 Lon protease (S16) C-terminal proteolytic domain HL41_RS04475 PF00293 NUDIX domain HL41_RS04480 PF14824 Sirohaem biosynthesis protein central HL41_RS04480 PF10414 Sirohaem synthase dimerisation region HL41_RS04480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HL41_RS04490 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain HL41_RS04490 PF01137 RNA 3'-terminal phosphate cyclase HL41_RS04500 PF04055 Radical SAM superfamily HL41_RS04500 PF00919 Uncharacterized protein family UPF0004 HL41_RS04500 PF01938 TRAM domain HL41_RS04510 PF00158 Sigma-54 interaction domain HL41_RS04510 PF00072 Response regulator receiver domain HL41_RS04510 PF02954 Bacterial regulatory protein, Fis family HL41_RS04515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HL41_RS04515 PF00512 His Kinase A (phospho-acceptor) domain HL41_RS04520 PF00535 Glycosyl transferase family 2 HL41_RS04525 PF17191 RecG wedge domain HL41_RS04525 PF00270 DEAD/DEAH box helicase HL41_RS04525 PF00271 Helicase conserved C-terminal domain HL41_RS04535 PF02153 Prephenate dehydrogenase HL41_RS04535 PF01817 Chorismate mutase type II HL41_RS04540 PF01790 Prolipoprotein diacylglyceryl transferase HL41_RS04545 PF00730 HhH-GPD superfamily base excision DNA repair protein HL41_RS04545 PF00633 Helix-hairpin-helix motif HL41_RS04555 PF01411 tRNA synthetases class II (A) HL41_RS04555 PF02272 DHHA1 domain HL41_RS04555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HL41_RS04565 PF02772 S-adenosylmethionine synthetase, central domain HL41_RS04565 PF00438 S-adenosylmethionine synthetase, N-terminal domain HL41_RS04565 PF02773 S-adenosylmethionine synthetase, C-terminal domain HL41_RS04570 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HL41_RS04570 PF05221 S-adenosyl-L-homocysteine hydrolase HL41_RS04575 PF00677 Lumazine binding domain HL41_RS04585 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HL41_RS04600 PF00091 Tubulin/FtsZ family, GTPase domain HL41_RS04600 PF12327 FtsZ family, C-terminal domain HL41_RS04605 PF02491 SHS2 domain inserted in FTSA HL41_RS04610 PF08478 POTRA domain, FtsQ-type HL41_RS04610 PF03799 Cell division protein FtsQ HL41_RS04615 PF01565 FAD binding domain HL41_RS04615 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HL41_RS04620 PF01225 Mur ligase family, catalytic domain HL41_RS04620 PF02875 Mur ligase family, glutamate ligase domain HL41_RS04620 PF08245 Mur ligase middle domain HL41_RS04625 PF03033 Glycosyltransferase family 28 N-terminal domain HL41_RS04625 PF04101 Glycosyltransferase family 28 C-terminal domain HL41_RS04630 PF08245 Mur ligase middle domain HL41_RS04630 PF02875 Mur ligase family, glutamate ligase domain HL41_RS04635 PF00953 Glycosyl transferase family 4 HL41_RS04635 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HL41_RS04640 PF08245 Mur ligase middle domain HL41_RS04640 PF02875 Mur ligase family, glutamate ligase domain HL41_RS04640 PF01225 Mur ligase family, catalytic domain HL41_RS04645 PF01225 Mur ligase family, catalytic domain HL41_RS04645 PF02875 Mur ligase family, glutamate ligase domain HL41_RS04645 PF08245 Mur ligase middle domain HL41_RS04660 PF01795 MraW methylase family HL41_RS04665 PF02381 MraZ protein, putative antitoxin-like HL41_RS04685 PF10609 NUBPL iron-transfer P-loop NTPase HL41_RS04710 PF02899 Phage integrase, N-terminal SAM-like domain HL41_RS04710 PF00589 Phage integrase family HL41_RS04755 PF04055 Radical SAM superfamily HL41_RS04760 PF01842 ACT domain HL41_RS04760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HL41_RS04760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HL41_RS04765 PF00266 Aminotransferase class-V HL41_RS04770 PF03449 Transcription elongation factor, N-terminal HL41_RS04770 PF01272 Transcription elongation factor, GreA/GreB, C-term HL41_RS04775 PF02142 MGS-like domain HL41_RS04775 PF01808 AICARFT/IMPCHase bienzyme HL41_RS04780 PF02684 Lipid-A-disaccharide synthetase HL41_RS04795 PF00132 Bacterial transferase hexapeptide (six repeats) HL41_RS04795 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HL41_RS04800 PF07977 FabA-like domain HL41_RS04815 PF00005 ABC transporter HL41_RS04820 PF02405 Permease MlaE HL41_RS04825 PF00920 Dehydratase family HL41_RS04830 PF01106 NifU-like domain HL41_RS04835 PF01192 RNA polymerase Rpb6 HL41_RS04840 PF00226 DnaJ domain HL41_RS04840 PF00684 DnaJ central domain HL41_RS04840 PF01556 DnaJ C terminal domain HL41_RS04845 PF01967 MoaC family HL41_RS04850 PF01258 Prokaryotic dksA/traR C4-type zinc finger HL41_RS04855 PF17760 UvrA interaction domain HL41_RS04855 PF17755 UvrA DNA-binding domain HL41_RS04860 PF12838 4Fe-4S dicluster domain HL41_RS04860 PF00037 4Fe-4S binding domain HL41_RS04870 PF01479 S4 domain HL41_RS04870 PF00849 RNA pseudouridylate synthase HL41_RS04875 PF01367 5'-3' exonuclease, C-terminal SAM fold HL41_RS04875 PF00476 DNA polymerase family A HL41_RS04875 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HL41_RS04880 PF00571 CBS domain HL41_RS04895 PF13288 DXP reductoisomerase C-terminal domain HL41_RS04895 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HL41_RS04895 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HL41_RS04900 PF17820 PDZ domain HL41_RS04900 PF02163 Peptidase family M50 HL41_RS04905 PF00814 Glycoprotease family HL41_RS04910 PF00528 Binding-protein-dependent transport system inner membrane component HL41_RS04915 PF00528 Binding-protein-dependent transport system inner membrane component HL41_RS04915 PF12911 N-terminal TM domain of oligopeptide transport permease C HL41_RS04925 PF09335 SNARE associated Golgi protein HL41_RS04930 PF03548 Outer membrane lipoprotein carrier protein LolA HL41_RS04935 PF17854 FtsK alpha domain HL41_RS04935 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HL41_RS04935 PF09397 Ftsk gamma domain HL41_RS04935 PF01580 FtsK/SpoIIIE family HL41_RS04955 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HL41_RS04955 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal HL41_RS04960 PF00374 Nickel-dependent hydrogenase HL41_RS04965 PF01924 Hydrogenase formation hypA family HL41_RS04970 PF01455 HupF/HypC family HL41_RS04975 PF01066 CDP-alcohol phosphatidyltransferase HL41_RS04980 PF13614 AAA domain HL41_RS04985 PF01040 UbiA prenyltransferase family HL41_RS05000 PF01119 DNA mismatch repair protein, C-terminal domain HL41_RS05000 PF08676 MutL C terminal dimerisation domain HL41_RS05010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HL41_RS05010 PF00056 lactate/malate dehydrogenase, NAD binding domain HL41_RS05020 PF00860 Permease family HL41_RS05030 PF00977 Histidine biosynthesis protein HL41_RS05035 PF00575 S1 RNA binding domain HL41_RS05035 PF00773 RNB domain HL41_RS05045 PF00459 Inositol monophosphatase family HL41_RS05060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HL41_RS05060 PF07497 Rho termination factor, RNA-binding domain HL41_RS05060 PF07498 Rho termination factor, N-terminal domain HL41_RS05090 PF00872 Transposase, Mutator family HL41_RS05095 PF02190 ATP-dependent protease La (LON) substrate-binding domain HL41_RS05095 PF05362 Lon protease (S16) C-terminal proteolytic domain HL41_RS05095 PF00004 ATPase family associated with various cellular activities (AAA) HL41_RS05100 PF10431 C-terminal, D2-small domain, of ClpB protein HL41_RS05100 PF06689 ClpX C4-type zinc finger HL41_RS05100 PF07724 AAA domain (Cdc48 subfamily) HL41_RS05105 PF00574 Clp protease HL41_RS05110 PF05698 Bacterial trigger factor protein (TF) C-terminus HL41_RS05110 PF05697 Bacterial trigger factor protein (TF) HL41_RS05110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HL41_RS05115 PF13735 tRNA nucleotidyltransferase domain 2 putative HL41_RS05115 PF01743 Poly A polymerase head domain HL41_RS05115 PF12627 Probable RNA and SrmB- binding site of polymerase A HL41_RS05120 PF01196 Ribosomal protein L17 HL41_RS05125 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HL41_RS05125 PF01000 RNA polymerase Rpb3/RpoA insert domain HL41_RS05125 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HL41_RS05130 PF00163 Ribosomal protein S4/S9 N-terminal domain HL41_RS05130 PF01479 S4 domain HL41_RS05135 PF00411 Ribosomal protein S11 HL41_RS05140 PF00416 Ribosomal protein S13/S18 HL41_RS05145 PF00444 Ribosomal protein L36 HL41_RS05150 PF01176 Translation initiation factor 1A / IF-1 HL41_RS05155 PF00557 Metallopeptidase family M24 HL41_RS05160 PF05191 Adenylate kinase, active site lid HL41_RS05165 PF00344 SecY translocase HL41_RS05170 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HL41_RS05175 PF00327 Ribosomal protein L30p/L7e HL41_RS05180 PF00333 Ribosomal protein S5, N-terminal domain HL41_RS05180 PF03719 Ribosomal protein S5, C-terminal domain HL41_RS05185 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HL41_RS05190 PF00347 Ribosomal protein L6 HL41_RS05195 PF00410 Ribosomal protein S8 HL41_RS05200 PF00253 Ribosomal protein S14p/S29e HL41_RS05205 PF00673 ribosomal L5P family C-terminus HL41_RS05205 PF00281 Ribosomal protein L5 HL41_RS05210 PF00467 KOW motif HL41_RS05210 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HL41_RS05215 PF00238 Ribosomal protein L14p/L23e HL41_RS05220 PF00366 Ribosomal protein S17 HL41_RS05225 PF00831 Ribosomal L29 protein HL41_RS05230 PF00252 Ribosomal protein L16p/L10e HL41_RS05235 PF00189 Ribosomal protein S3, C-terminal domain HL41_RS05235 PF07650 KH domain HL41_RS05240 PF00237 Ribosomal protein L22p/L17e HL41_RS05245 PF00203 Ribosomal protein S19 HL41_RS05250 PF00181 Ribosomal Proteins L2, RNA binding domain HL41_RS05250 PF03947 Ribosomal Proteins L2, C-terminal domain HL41_RS05255 PF00276 Ribosomal protein L23 HL41_RS05260 PF00573 Ribosomal protein L4/L1 family HL41_RS05265 PF00297 Ribosomal protein L3 HL41_RS05270 PF00338 Ribosomal protein S10p/S20e HL41_RS05275 PF03143 Elongation factor Tu C-terminal domain HL41_RS05275 PF03144 Elongation factor Tu domain 2 HL41_RS05275 PF00009 Elongation factor Tu GTP binding domain HL41_RS05280 PF00009 Elongation factor Tu GTP binding domain HL41_RS05280 PF03144 Elongation factor Tu domain 2 HL41_RS05280 PF03764 Elongation factor G, domain IV HL41_RS05280 PF14492 Elongation Factor G, domain II HL41_RS05280 PF00679 Elongation factor G C-terminus HL41_RS05285 PF00177 Ribosomal protein S7p/S5e HL41_RS05290 PF00164 Ribosomal protein S12/S23 HL41_RS05295 PF00004 ATPase family associated with various cellular activities (AAA) HL41_RS05295 PF16193 AAA C-terminal domain HL41_RS05295 PF12002 MgsA AAA+ ATPase C terminal HL41_RS05305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HL41_RS05305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HL41_RS05310 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HL41_RS05315 PF00535 Glycosyl transferase family 2 HL41_RS05320 PF00464 Serine hydroxymethyltransferase HL41_RS05325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HL41_RS05330 PF01556 DnaJ C terminal domain HL41_RS05330 PF00226 DnaJ domain HL41_RS05335 PF17284 Spermidine synthase tetramerisation domain HL41_RS05345 PF00881 Nitroreductase family HL41_RS05350 PF13098 Thioredoxin-like domain HL41_RS05350 PF10411 Disulfide bond isomerase protein N-terminus HL41_RS05355 PF01871 AMMECR1 HL41_RS05360 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HL41_RS05360 PF00056 lactate/malate dehydrogenase, NAD binding domain HL41_RS05365 PF13086 AAA domain HL41_RS05365 PF13087 AAA domain HL41_RS05365 PF13195 Protein of unknown function (DUF4011) HL41_RS05370 PF00881 Nitroreductase family HL41_RS05375 PF13098 Thioredoxin-like domain HL41_RS05375 PF10411 Disulfide bond isomerase protein N-terminus HL41_RS05380 PF01871 AMMECR1 HL41_RS05395 PF00226 DnaJ domain HL41_RS05395 PF01556 DnaJ C terminal domain HL41_RS05395 PF00684 DnaJ central domain HL41_RS05400 PF01842 ACT domain HL41_RS05400 PF00696 Amino acid kinase family HL41_RS05400 PF13840 ACT domain HL41_RS05405 PF00682 HMGL-like HL41_RS05405 PF08502 LeuA allosteric (dimerisation) domain HL41_RS05415 PF09190 DALR domain HL41_RS05415 PF01406 tRNA synthetases class I (C) catalytic domain HL41_RS05425 PF00475 Imidazoleglycerol-phosphate dehydratase HL41_RS05430 PF01416 tRNA pseudouridine synthase HL41_RS05435 PF02774 Semialdehyde dehydrogenase, dimerisation domain HL41_RS05435 PF01118 Semialdehyde dehydrogenase, NAD binding domain HL41_RS05440 PF00380 Ribosomal protein S9/S16 HL41_RS05445 PF00572 Ribosomal protein L13 HL41_RS05455 PF01145 SPFH domain / Band 7 family HL41_RS05465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HL41_RS05465 PF00205 Thiamine pyrophosphate enzyme, central domain HL41_RS05465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HL41_RS05470 PF01842 ACT domain HL41_RS05470 PF10369 Small subunit of acetolactate synthase HL41_RS05475 PF02780 Transketolase, C-terminal domain HL41_RS05475 PF02779 Transketolase, pyrimidine binding domain HL41_RS05475 PF00456 Transketolase, thiamine diphosphate binding domain HL41_RS05480 PF00902 Sec-independent protein translocase protein (TatC) HL41_RS05485 PF02416 mttA/Hcf106 family HL41_RS05490 PF08679 Dissimilatory sulfite reductase D (DsrD) HL41_RS05495 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HL41_RS05495 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HL41_RS05500 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HL41_RS05500 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HL41_RS05505 PF00005 ABC transporter HL41_RS05540 PF02618 YceG-like family HL41_RS05545 PF00398 Ribosomal RNA adenine dimethylase HL41_RS05565 PF01894 Uncharacterised protein family UPF0047 HL41_RS05575 PF08502 LeuA allosteric (dimerisation) domain HL41_RS05575 PF00682 HMGL-like HL41_RS05600 PF07690 Major Facilitator Superfamily HL41_RS05630 PF07499 RuvA, C-terminal domain HL41_RS05630 PF01330 RuvA N terminal domain HL41_RS05635 PF02075 Crossover junction endodeoxyribonuclease RuvC HL41_RS05640 PF01709 Transcriptional regulator HL41_RS05650 PF01613 Flavin reductase like domain HL41_RS05650 PF00301 Rubredoxin HL41_RS05665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HL41_RS05665 PF01872 RibD C-terminal domain HL41_RS05670 PF01121 Dephospho-CoA kinase HL41_RS05675 PF01479 S4 domain HL41_RS05675 PF00849 RNA pseudouridylate synthase HL41_RS05680 PF00850 Histone deacetylase domain HL41_RS05690 PF01687 Riboflavin kinase HL41_RS05690 PF06574 FAD synthetase HL41_RS05695 PF00117 Glutamine amidotransferase class-I HL41_RS05695 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HL41_RS05710 PF00753 Metallo-beta-lactamase superfamily HL41_RS05710 PF00258 Flavodoxin HL41_RS05720 PF00301 Rubredoxin HL41_RS05725 PF06397 Desulfoferrodoxin, N-terminal domain HL41_RS05725 PF01880 Desulfoferrodoxin HL41_RS05735 PF00216 Bacterial DNA-binding protein HL41_RS05740 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HL41_RS05740 PF01588 Putative tRNA binding domain HL41_RS05740 PF03147 Ferredoxin-fold anticodon binding domain HL41_RS05740 PF03483 B3/4 domain HL41_RS05740 PF03484 tRNA synthetase B5 domain HL41_RS05745 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HL41_RS05745 PF01409 tRNA synthetases class II core domain (F) HL41_RS05750 PF00453 Ribosomal protein L20 HL41_RS05755 PF01632 Ribosomal protein L35 HL41_RS05760 PF02548 Ketopantoate hydroxymethyltransferase HL41_RS05765 PF05496 Holliday junction DNA helicase RuvB P-loop domain HL41_RS05765 PF17864 RuvB AAA lid domain HL41_RS05765 PF05491 RuvB C-terminal winged helix domain HL41_RS05790 PF17910 FeoB cytosolic helical domain HL41_RS05790 PF07664 Ferrous iron transport protein B C terminus HL41_RS05790 PF07670 Nucleoside recognition HL41_RS05790 PF04023 FeoA domain HL41_RS05790 PF02421 Ferrous iron transport protein B HL41_RS05795 PF04023 FeoA domain HL41_RS05800 PF00072 Response regulator receiver domain HL41_RS05800 PF01966 HD domain HL41_RS05805 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS05805 PF17158 Membrane-associated sensor, integral membrane domain HL41_RS05815 PF00578 AhpC/TSA family HL41_RS05815 PF10417 C-terminal domain of 1-Cys peroxiredoxin HL41_RS05830 PF02915 Rubrerythrin HL41_RS05840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HL41_RS05840 PF00460 Flagella basal body rod protein HL41_RS05840 PF07559 Flagellar basal body protein FlaE HL41_RS05855 PF00361 Proton-conducting membrane transporter HL41_RS05860 PF00361 Proton-conducting membrane transporter HL41_RS05860 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HL41_RS05865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HL41_RS05865 PF00361 Proton-conducting membrane transporter HL41_RS05870 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HL41_RS05875 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HL41_RS05880 PF12838 4Fe-4S dicluster domain HL41_RS05885 PF00146 NADH dehydrogenase HL41_RS05890 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HL41_RS05895 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HL41_RS05900 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HL41_RS05905 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HL41_RS05910 PF12800 4Fe-4S binding domain HL41_RS05910 PF13247 4Fe-4S dicluster domain HL41_RS05920 PF13380 CoA binding domain HL41_RS05925 PF00162 Phosphoglycerate kinase HL41_RS05925 PF00121 Triosephosphate isomerase HL41_RS05930 PF00162 Phosphoglycerate kinase HL41_RS05935 PF00885 6,7-dimethyl-8-ribityllumazine synthase HL41_RS05950 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HL41_RS05950 PF00391 PEP-utilising enzyme, mobile domain HL41_RS05950 PF02896 PEP-utilising enzyme, TIM barrel domain HL41_RS05955 PF01668 SmpB protein HL41_RS05960 PF13476 AAA domain HL41_RS05965 PF12804 MobA-like NTP transferase domain HL41_RS05970 PF00072 Response regulator receiver domain HL41_RS05970 PF01966 HD domain HL41_RS05985 PF01048 Phosphorylase superfamily HL41_RS05990 PF02621 Menaquinone biosynthesis HL41_RS05995 PF01618 MotA/TolQ/ExbB proton channel family HL41_RS06000 PF00085 Thioredoxin HL41_RS06015 PF02810 SEC-C motif HL41_RS06015 PF07517 SecA DEAD-like domain HL41_RS06015 PF01043 SecA preprotein cross-linking domain HL41_RS06015 PF07516 SecA Wing and Scaffold domain HL41_RS06020 PF01142 tRNA pseudouridine synthase D (TruD) HL41_RS06025 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HL41_RS06030 PF00953 Glycosyl transferase family 4 HL41_RS06035 PF01050 Mannose-6-phosphate isomerase HL41_RS06035 PF00483 Nucleotidyl transferase HL41_RS06040 PF08645 Polynucleotide kinase 3 phosphatase HL41_RS06045 PF00483 Nucleotidyl transferase HL41_RS06050 PF00288 GHMP kinases N terminal domain HL41_RS06050 PF08544 GHMP kinases C terminal HL41_RS06070 PF00535 Glycosyl transferase family 2 HL41_RS06080 PF02350 UDP-N-acetylglucosamine 2-epimerase HL41_RS06150 PF03063 Prismane/CO dehydrogenase family HL41_RS06155 PF04321 RmlD substrate binding domain HL41_RS06160 PF16363 GDP-mannose 4,6 dehydratase HL41_RS06165 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HL41_RS06170 PF00483 Nucleotidyl transferase HL41_RS06175 PF00582 Universal stress protein family HL41_RS06190 PF01966 HD domain HL41_RS06190 PF13286 Phosphohydrolase-associated domain HL41_RS06195 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HL41_RS06195 PF01368 DHH family HL41_RS06195 PF17768 RecJ OB domain HL41_RS06195 PF02272 DHHA1 domain HL41_RS06200 PF01370 NAD dependent epimerase/dehydratase family HL41_RS06205 PF07992 Pyridine nucleotide-disulphide oxidoreductase HL41_RS06210 PF01472 PUA domain HL41_RS06210 PF00696 Amino acid kinase family HL41_RS06215 PF01926 50S ribosome-binding GTPase HL41_RS06215 PF01018 GTP1/OBG HL41_RS06215 PF09269 Domain of unknown function (DUF1967) HL41_RS06225 PF07075 Protein of unknown function (DUF1343) HL41_RS06240 PF01624 MutS domain I HL41_RS06240 PF05188 MutS domain II HL41_RS06240 PF05192 MutS domain III HL41_RS06240 PF05190 MutS family domain IV HL41_RS06240 PF00488 MutS domain V HL41_RS06245 PF01467 Cytidylyltransferase-like HL41_RS06250 PF00171 Aldehyde dehydrogenase family HL41_RS06260 PF01479 S4 domain HL41_RS06260 PF01728 FtsJ-like methyltransferase HL41_RS06265 PF13533 Biotin-lipoyl like HL41_RS06270 PF00005 ABC transporter HL41_RS06290 PF01578 Cytochrome C assembly protein HL41_RS06295 PF01488 Shikimate / quinate 5-dehydrogenase HL41_RS06295 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HL41_RS06295 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HL41_RS06300 PF00436 Single-strand binding protein family HL41_RS06315 PF00753 Metallo-beta-lactamase superfamily HL41_RS06320 PF00689 Cation transporting ATPase, C-terminus HL41_RS06320 PF00690 Cation transporter/ATPase, N-terminus HL41_RS06325 PF00154 recA bacterial DNA recombination protein HL41_RS06330 PF00294 pfkB family carbohydrate kinase HL41_RS06330 PF01467 Cytidylyltransferase-like HL41_RS06335 PF03952 Enolase, N-terminal domain HL41_RS06335 PF00113 Enolase, C-terminal TIM barrel domain HL41_RS06345 PF02885 Glycosyl transferase family, helical bundle domain HL41_RS06345 PF00591 Glycosyl transferase family, a/b domain HL41_RS06365 PF00301 Rubredoxin HL41_RS06375 PF09115 DNA polymerase III, delta subunit, C terminal HL41_RS06380 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HL41_RS06385 PF17827 PrmC N-terminal domain HL41_RS06385 PF05175 Methyltransferase small domain HL41_RS06400 PF00482 Type II secretion system (T2SS), protein F HL41_RS06405 PF00478 IMP dehydrogenase / GMP reductase domain HL41_RS06405 PF00571 CBS domain HL41_RS06410 PF02541 Ppx/GppA phosphatase family HL41_RS06410 PF01761 3-dehydroquinate synthase HL41_RS06415 PF01343 Peptidase family S49 HL41_RS06420 PF00575 S1 RNA binding domain HL41_RS06440 PF00072 Response regulator receiver domain HL41_RS06440 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS06450 PF01964 Radical SAM ThiC family HL41_RS06455 PF00156 Phosphoribosyl transferase domain HL41_RS06465 PF06071 Protein of unknown function (DUF933) HL41_RS06465 PF01926 50S ribosome-binding GTPase HL41_RS06475 PF13439 Glycosyltransferase Family 4 HL41_RS06475 PF00534 Glycosyl transferases group 1 HL41_RS06485 PF00343 Carbohydrate phosphorylase HL41_RS06485 PF11897 Protein of unknown function (DUF3417) HL41_RS06500 PF01513 ATP-NAD kinase HL41_RS06520 PF17284 Spermidine synthase tetramerisation domain HL41_RS06540 PF00933 Glycosyl hydrolase family 3 N terminal domain HL41_RS06545 PF00266 Aminotransferase class-V HL41_RS06550 PF00270 DEAD/DEAH box helicase HL41_RS06550 PF01131 DNA topoisomerase HL41_RS06550 PF01751 Toprim domain HL41_RS06550 PF17915 Reverse gyrase zinc finger HL41_RS06555 PF01578 Cytochrome C assembly protein HL41_RS06560 PF00478 IMP dehydrogenase / GMP reductase domain HL41_RS06560 PF00571 CBS domain HL41_RS06565 PF00905 Penicillin binding protein transpeptidase domain HL41_RS06565 PF00912 Transglycosylase HL41_RS06855 PF00436 Single-strand binding protein family HL41_RS06860 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS06880 PF02152 Dihydroneopterin aldolase HL41_RS06880 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HL41_RS06885 PF00155 Aminotransferase class I and II HL41_RS06890 PF01658 Myo-inositol-1-phosphate synthase HL41_RS06895 PF03989 DNA gyrase C-terminal domain, beta-propeller HL41_RS06895 PF00521 DNA gyrase/topoisomerase IV, subunit A HL41_RS06905 PF00591 Glycosyl transferase family, a/b domain HL41_RS06905 PF00117 Glutamine amidotransferase class-I HL41_RS06905 PF02885 Glycosyl transferase family, helical bundle domain HL41_RS06910 PF04715 Anthranilate synthase component I, N terminal region HL41_RS06910 PF00425 chorismate binding enzyme HL41_RS06915 PF13393 Histidyl-tRNA synthetase HL41_RS06915 PF03129 Anticodon binding domain HL41_RS06920 PF07992 Pyridine nucleotide-disulphide oxidoreductase HL41_RS06920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HL41_RS06925 PF02421 Ferrous iron transport protein B HL41_RS06925 PF17910 FeoB cytosolic helical domain HL41_RS06925 PF07664 Ferrous iron transport protein B C terminus HL41_RS06925 PF07670 Nucleoside recognition HL41_RS06925 PF04023 FeoA domain HL41_RS06930 PF01321 Creatinase/Prolidase N-terminal domain HL41_RS06930 PF00557 Metallopeptidase family M24 HL41_RS06945 PF02581 Thiamine monophosphate synthase HL41_RS06950 PF04055 Radical SAM superfamily HL41_RS06960 PF01545 Cation efflux family HL41_RS06965 PF00512 His Kinase A (phospho-acceptor) domain HL41_RS06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HL41_RS06965 PF00672 HAMP domain HL41_RS06970 PF02954 Bacterial regulatory protein, Fis family HL41_RS06970 PF00072 Response regulator receiver domain HL41_RS06970 PF00158 Sigma-54 interaction domain HL41_RS06985 PF01070 FMN-dependent dehydrogenase HL41_RS07000 PF02589 LUD domain HL41_RS07005 PF02754 Cysteine-rich domain HL41_RS07010 PF01565 FAD binding domain HL41_RS07010 PF02913 FAD linked oxidases, C-terminal domain HL41_RS07015 PF02652 L-lactate permease HL41_RS07020 PF13380 CoA binding domain HL41_RS07020 PF13607 Succinyl-CoA ligase like flavodoxin domain HL41_RS07025 PF07085 DRTGG domain HL41_RS07030 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HL41_RS07035 PF00037 4Fe-4S binding domain HL41_RS07040 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HL41_RS07040 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HL41_RS07045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HL41_RS07050 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HL41_RS07055 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HL41_RS07055 PF00374 Nickel-dependent hydrogenase HL41_RS07065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HL41_RS07065 PF13244 Domain of unknown function (DUF4040) HL41_RS07065 PF00361 Proton-conducting membrane transporter HL41_RS07070 PF00361 Proton-conducting membrane transporter HL41_RS07075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HL41_RS07105 PF01209 ubiE/COQ5 methyltransferase family HL41_RS07115 PF01979 Amidohydrolase family HL41_RS07120 PF04055 Radical SAM superfamily HL41_RS07125 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HL41_RS07125 PF12557 Cob(I)alamin adenosyltransferase N terminal HL41_RS07140 PF00291 Pyridoxal-phosphate dependent enzyme HL41_RS07145 PF03734 L,D-transpeptidase catalytic domain HL41_RS07145 PF17969 L,D-transpeptidase C-terminal domain HL41_RS07150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HL41_RS07155 PF01979 Amidohydrolase family HL41_RS07160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HL41_RS07160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HL41_RS07165 PF03641 Possible lysine decarboxylase HL41_RS07170 PF02565 Recombination protein O C terminal HL41_RS07170 PF11967 Recombination protein O N terminal HL41_RS07180 PF17820 PDZ domain HL41_RS07180 PF13180 PDZ domain HL41_RS07190 PF05698 Bacterial trigger factor protein (TF) C-terminus HL41_RS07195 PF00132 Bacterial transferase hexapeptide (six repeats) HL41_RS07195 PF12804 MobA-like NTP transferase domain HL41_RS07210 PF08267 Cobalamin-independent synthase, N-terminal domain HL41_RS07210 PF01717 Cobalamin-independent synthase, Catalytic domain HL41_RS07220 PF00834 Ribulose-phosphate 3 epimerase family HL41_RS07235 PF01435 Peptidase family M48 HL41_RS07260 PF00403 Heavy-metal-associated domain HL41_RS07270 PF08495 FIST N domain HL41_RS07275 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS07275 PF13185 GAF domain HL41_RS07305 PF08032 RNA 2'-O ribose methyltransferase substrate binding HL41_RS07305 PF00588 SpoU rRNA Methylase family HL41_RS07310 PF02649 Type I GTP cyclohydrolase folE2 HL41_RS07315 PF00809 Pterin binding enzyme HL41_RS07320 PF04060 Putative Fe-S cluster HL41_RS07320 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit HL41_RS07325 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain HL41_RS07325 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit HL41_RS07330 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit HL41_RS07355 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HL41_RS07355 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HL41_RS07360 PF01268 Formate--tetrahydrofolate ligase HL41_RS07380 PF02685 Glucokinase HL41_RS07385 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HL41_RS07390 PF05193 Peptidase M16 inactive domain HL41_RS07390 PF00675 Insulinase (Peptidase family M16) HL41_RS07400 PF00270 DEAD/DEAH box helicase HL41_RS07400 PF18019 HD domain HL41_RS07400 PF18395 Cas3 C-terminal domain HL41_RS07435 PF01867 CRISPR associated protein Cas1 HL41_RS07440 PF09827 CRISPR associated protein Cas2 HL41_RS07445 PF00176 SNF2 family N-terminal domain HL41_RS07445 PF00271 Helicase conserved C-terminal domain HL41_RS07465 PF01934 Protein of unknown function DUF86 HL41_RS07485 PF02441 Flavoprotein HL41_RS07485 PF04127 DNA / pantothenate metabolism flavoprotein HL41_RS07490 PF04055 Radical SAM superfamily HL41_RS07490 PF13186 Iron-sulfur cluster-binding domain HL41_RS07495 PF00149 Calcineurin-like phosphoesterase HL41_RS07500 PF12849 PBP superfamily domain HL41_RS07530 PF12729 Four helix bundle sensory module for signal transduction HL41_RS07530 PF00672 HAMP domain HL41_RS07530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HL41_RS07540 PF13439 Glycosyltransferase Family 4 HL41_RS07540 PF00534 Glycosyl transferases group 1 HL41_RS07555 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HL41_RS07560 PF00534 Glycosyl transferases group 1 HL41_RS07560 PF13439 Glycosyltransferase Family 4 HL41_RS07565 PF00793 DAHP synthetase I family HL41_RS07565 PF18152 DAHP synthase ferredoxin-like domain HL41_RS07580 PF00919 Uncharacterized protein family UPF0004 HL41_RS07580 PF04055 Radical SAM superfamily HL41_RS07585 PF01066 CDP-alcohol phosphatidyltransferase HL41_RS07590 PF05970 PIF1-like helicase HL41_RS07590 PF02689 Helicase HL41_RS07595 PF01751 Toprim domain HL41_RS07595 PF01131 DNA topoisomerase HL41_RS07605 PF00291 Pyridoxal-phosphate dependent enzyme HL41_RS07610 PF00290 Tryptophan synthase alpha chain HL41_RS07615 PF01761 3-dehydroquinate synthase HL41_RS07620 PF01678 Diaminopimelate epimerase HL41_RS07625 PF00701 Dihydrodipicolinate synthetase family HL41_RS07630 PF03358 NADPH-dependent FMN reductase HL41_RS07635 PF00027 Cyclic nucleotide-binding domain HL41_RS07635 PF13545 Crp-like helix-turn-helix domain HL41_RS07640 PF01451 Low molecular weight phosphotyrosine protein phosphatase HL41_RS07655 PF12792 CSS motif domain associated with EAL HL41_RS07655 PF00563 EAL domain HL41_RS07665 PF07733 Bacterial DNA polymerase III alpha NTPase domain HL41_RS07665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HL41_RS07665 PF14579 Helix-hairpin-helix motif HL41_RS07665 PF02811 PHP domain HL41_RS07670 PF00210 Ferritin-like domain HL41_RS07675 PF01029 NusB family HL41_RS07675 PF01189 16S rRNA methyltransferase RsmB/F HL41_RS07680 PF00271 Helicase conserved C-terminal domain HL41_RS07680 PF04851 Type III restriction enzyme, res subunit HL41_RS07680 PF02151 UvrB/uvrC motif HL41_RS07680 PF17757 UvrB interaction domain HL41_RS07680 PF12344 Ultra-violet resistance protein B HL41_RS07700 PF01197 Ribosomal protein L31 HL41_RS07705 PF03462 PCRF domain HL41_RS07705 PF00472 RF-1 domain HL41_RS07725 PF00535 Glycosyl transferase family 2 HL41_RS07735 PF00562 RNA polymerase Rpb2, domain 6 HL41_RS07735 PF04560 RNA polymerase Rpb2, domain 7 HL41_RS07735 PF10385 RNA polymerase beta subunit external 1 domain HL41_RS07735 PF04565 RNA polymerase Rpb2, domain 3 HL41_RS07735 PF04561 RNA polymerase Rpb2, domain 2 HL41_RS07735 PF04563 RNA polymerase beta subunit HL41_RS07765 PF02542 YgbB family HL41_RS07770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HL41_RS07775 PF02080 TrkA-C domain HL41_RS07775 PF02254 TrkA-N domain HL41_RS07775 PF00999 Sodium/hydrogen exchanger family HL41_RS07780 PF00999 Sodium/hydrogen exchanger family HL41_RS07785 PF02677 Epoxyqueuosine reductase QueH HL41_RS07795 PF01728 FtsJ-like methyltransferase HL41_RS07800 PF00149 Calcineurin-like phosphoesterase HL41_RS07805 PF01113 Dihydrodipicolinate reductase, N-terminus HL41_RS07805 PF05173 Dihydrodipicolinate reductase, C-terminus HL41_RS07825 PF01177 Asp/Glu/Hydantoin racemase HL41_RS07835 PF00202 Aminotransferase class-III HL41_RS07840 PF04055 Radical SAM superfamily HL41_RS07840 PF00919 Uncharacterized protein family UPF0004 HL41_RS07840 PF01938 TRAM domain HL41_RS07850 PF03453 MoeA N-terminal region (domain I and II) HL41_RS07850 PF03454 MoeA C-terminal region (domain IV) HL41_RS07850 PF00994 Probable molybdopterin binding domain HL41_RS07860 PF02954 Bacterial regulatory protein, Fis family HL41_RS07860 PF00072 Response regulator receiver domain HL41_RS07860 PF00158 Sigma-54 interaction domain HL41_RS07865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HL41_RS07865 PF00512 His Kinase A (phospho-acceptor) domain HL41_RS07870 PF00072 Response regulator receiver domain HL41_RS07870 PF00158 Sigma-54 interaction domain HL41_RS07870 PF02954 Bacterial regulatory protein, Fis family HL41_RS07875 PF02896 PEP-utilising enzyme, TIM barrel domain HL41_RS07875 PF00391 PEP-utilising enzyme, mobile domain HL41_RS07875 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HL41_RS07880 PF07702 UTRA domain HL41_RS07880 PF00392 Bacterial regulatory proteins, gntR family HL41_RS07900 PF03600 Citrate transporter HL41_RS07905 PF00582 Universal stress protein family HL41_RS07920 PF00582 Universal stress protein family HL41_RS07940 PF01975 Survival protein SurE HL41_RS07945 PF01960 ArgJ family HL41_RS07950 PF00005 ABC transporter HL41_RS07955 PF00528 Binding-protein-dependent transport system inner membrane component HL41_RS07960 PF00528 Binding-protein-dependent transport system inner membrane component HL41_RS07965 PF12849 PBP superfamily domain HL41_RS07970 PF00486 Transcriptional regulatory protein, C terminal HL41_RS07970 PF00072 Response regulator receiver domain HL41_RS07975 PF00512 His Kinase A (phospho-acceptor) domain HL41_RS07975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HL41_RS07975 PF00672 HAMP domain HL41_RS07975 PF18698 Histidine kinase sensor domain HL41_RS07975 PF00989 PAS fold HL41_RS07980 PF07715 TonB-dependent Receptor Plug Domain HL41_RS07980 PF00593 TonB dependent receptor HL41_RS07985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HL41_RS07990 PF04551 GcpE protein HL41_RS08005 PF13247 4Fe-4S dicluster domain HL41_RS08015 PF00448 SRP54-type protein, GTPase domain HL41_RS08015 PF02881 SRP54-type protein, helical bundle domain HL41_RS08030 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HL41_RS08030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HL41_RS08030 PF00037 4Fe-4S binding domain HL41_RS08035 PF02906 Iron only hydrogenase large subunit, C-terminal domain HL41_RS08035 PF02256 Iron hydrogenase small subunit HL41_RS08035 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HL41_RS08035 PF00037 4Fe-4S binding domain HL41_RS08045 PF02906 Iron only hydrogenase large subunit, C-terminal domain HL41_RS08045 PF02256 Iron hydrogenase small subunit HL41_RS08045 PF00037 4Fe-4S binding domain HL41_RS08045 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HL41_RS08050 PF13187 4Fe-4S dicluster domain HL41_RS08050 PF02906 Iron only hydrogenase large subunit, C-terminal domain HL41_RS08060 PF00206 Lyase HL41_RS08060 PF10415 Fumarase C C-terminus HL41_RS08075 PF01926 50S ribosome-binding GTPase HL41_RS08075 PF12631 MnmE helical domain HL41_RS08075 PF10396 GTP-binding protein TrmE N-terminus HL41_RS08080 PF06968 Biotin and Thiamin Synthesis associated domain HL41_RS08080 PF04055 Radical SAM superfamily HL41_RS08100 PF14579 Helix-hairpin-helix motif HL41_RS08100 PF02811 PHP domain HL41_RS08100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HL41_RS08100 PF00929 Exonuclease HL41_RS08100 PF14480 DNA polymerase III polC-type N-terminus I HL41_RS08100 PF07733 Bacterial DNA polymerase III alpha NTPase domain HL41_RS08100 PF11490 DNA polymerase III polC-type N-terminus II HL41_RS08110 PF00474 Sodium:solute symporter family HL41_RS08115 PF04341 Protein of unknown function, DUF485 HL41_RS08120 PF01926 50S ribosome-binding GTPase HL41_RS08130 PF00294 pfkB family carbohydrate kinase HL41_RS08135 PF01523 Putative modulator of DNA gyrase HL41_RS08140 PF00156 Phosphoribosyl transferase domain HL41_RS08145 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HL41_RS08155 PF04073 Aminoacyl-tRNA editing domain HL41_RS08155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HL41_RS08155 PF03129 Anticodon binding domain HL41_RS08160 PF02705 K+ potassium transporter HL41_RS08180 PF14535 AMP-binding enzyme C-terminal domain HL41_RS08180 PF00501 AMP-binding enzyme HL41_RS08190 PF00501 AMP-binding enzyme HL41_RS08190 PF14535 AMP-binding enzyme C-terminal domain HL41_RS08195 PF12728 Helix-turn-helix domain HL41_RS08195 PF12727 PBP superfamily domain HL41_RS08205 PF13247 4Fe-4S dicluster domain HL41_RS08210 PF01568 Molydopterin dinucleotide binding domain HL41_RS08210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HL41_RS08210 PF00384 Molybdopterin oxidoreductase HL41_RS08215 PF01568 Molydopterin dinucleotide binding domain HL41_RS08215 PF00384 Molybdopterin oxidoreductase HL41_RS08215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HL41_RS08225 PF03968 OstA-like protein HL41_RS08225 PF04453 LPS transport system D HL41_RS08230 PF02590 Predicted SPOUT methyltransferase HL41_RS08245 PF02754 Cysteine-rich domain HL41_RS08250 PF02085 Class III cytochrome C family HL41_RS08255 PF13247 4Fe-4S dicluster domain HL41_RS08260 PF03916 Polysulphide reductase, NrfD HL41_RS08265 PF00384 Molybdopterin oxidoreductase HL41_RS08265 PF01568 Molydopterin dinucleotide binding domain HL41_RS08265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HL41_RS08270 PF13247 4Fe-4S dicluster domain HL41_RS08270 PF12800 4Fe-4S binding domain HL41_RS08275 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HL41_RS08280 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HL41_RS08285 PF12838 4Fe-4S dicluster domain HL41_RS08290 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HL41_RS08295 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HL41_RS08300 PF00146 NADH dehydrogenase HL41_RS08305 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HL41_RS08310 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HL41_RS08315 PF00361 Proton-conducting membrane transporter HL41_RS08325 PF00361 Proton-conducting membrane transporter HL41_RS08330 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HL41_RS08330 PF00361 Proton-conducting membrane transporter HL41_RS08335 PF00361 Proton-conducting membrane transporter HL41_RS08340 PF02743 Cache domain HL41_RS08340 PF00672 HAMP domain HL41_RS08340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HL41_RS08345 PF00158 Sigma-54 interaction domain HL41_RS08345 PF00072 Response regulator receiver domain HL41_RS08345 PF02954 Bacterial regulatory protein, Fis family HL41_RS08350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HL41_RS08350 PF00512 His Kinase A (phospho-acceptor) domain HL41_RS08360 PF07992 Pyridine nucleotide-disulphide oxidoreductase HL41_RS08365 PF02492 CobW/HypB/UreG, nucleotide-binding domain HL41_RS08370 PF00586 AIR synthase related protein, N-terminal domain HL41_RS08370 PF02769 AIR synthase related protein, C-terminal domain HL41_RS08375 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA HL41_RS08380 PF01300 Telomere recombination HL41_RS08380 PF00708 Acylphosphatase HL41_RS08380 PF17788 HypF Kae1-like domain HL41_RS08380 PF07503 HypF finger HL41_RS08385 PF01750 Hydrogenase maturation protease HL41_RS08425 PF13419 Haloacid dehalogenase-like hydrolase HL41_RS08430 PF07690 Major Facilitator Superfamily HL41_RS08440 PF10397 Adenylosuccinate lyase C-terminus HL41_RS08440 PF00206 Lyase HL41_RS08445 PF00293 NUDIX domain HL41_RS08455 PF01250 Ribosomal protein S6 HL41_RS08460 PF01084 Ribosomal protein S18 HL41_RS08465 PF03948 Ribosomal protein L9, C-terminal domain HL41_RS08465 PF01281 Ribosomal protein L9, N-terminal domain HL41_RS08470 PF00772 DnaB-like helicase N terminal domain HL41_RS08470 PF03796 DnaB-like helicase C terminal domain HL41_RS08475 PF00582 Universal stress protein family HL41_RS08480 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HL41_RS08480 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HL41_RS08500 PF00580 UvrD/REP helicase N-terminal domain HL41_RS08500 PF13361 UvrD-like helicase C-terminal domain HL41_RS08500 PF12705 PD-(D/E)XK nuclease superfamily HL41_RS08510 PF00348 Polyprenyl synthetase HL41_RS08515 PF01747 ATP-sulfurylase HL41_RS08515 PF14306 PUA-like domain HL41_RS08525 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit HL41_RS08525 PF13187 4Fe-4S dicluster domain HL41_RS08530 PF00890 FAD binding domain HL41_RS08535 PF00890 FAD binding domain HL41_RS08535 PF14537 Cytochrome c3 HL41_RS08540 PF01593 Flavin containing amine oxidoreductase HL41_RS08565 PF00009 Elongation factor Tu GTP binding domain HL41_RS08565 PF03144 Elongation factor Tu domain 2 HL41_RS08565 PF03143 Elongation factor Tu C-terminal domain HL41_RS08570 PF00471 Ribosomal protein L33 HL41_RS08585 PF00467 KOW motif HL41_RS08585 PF02357 Transcription termination factor nusG HL41_RS08590 PF00298 Ribosomal protein L11, RNA binding domain HL41_RS08590 PF03946 Ribosomal protein L11, N-terminal domain HL41_RS08595 PF00687 Ribosomal protein L1p/L10e family HL41_RS08600 PF00466 Ribosomal protein L10 HL41_RS08605 PF16320 Ribosomal protein L7/L12 dimerisation domain HL41_RS08605 PF00542 Ribosomal protein L7/L12 C-terminal domain HL41_RS08610 PF04561 RNA polymerase Rpb2, domain 2 HL41_RS08610 PF04560 RNA polymerase Rpb2, domain 7 HL41_RS08610 PF00562 RNA polymerase Rpb2, domain 6 HL41_RS08610 PF10385 RNA polymerase beta subunit external 1 domain HL41_RS08610 PF04565 RNA polymerase Rpb2, domain 3 HL41_RS08610 PF04563 RNA polymerase beta subunit HL41_RS08615 PF05000 RNA polymerase Rpb1, domain 4 HL41_RS08615 PF04997 RNA polymerase Rpb1, domain 1 HL41_RS08615 PF04983 RNA polymerase Rpb1, domain 3 HL41_RS08615 PF04998 RNA polymerase Rpb1, domain 5 HL41_RS08615 PF00623 RNA polymerase Rpb1, domain 2 HL41_RS08620 PF00312 Ribosomal protein S15 HL41_RS08625 PF13180 PDZ domain HL41_RS08630 PF00708 Acylphosphatase HL41_RS08635 PF07687 Peptidase dimerisation domain HL41_RS08635 PF01546 Peptidase family M20/M25/M40 HL41_RS08640 PF00156 Phosphoribosyl transferase domain HL41_RS08645 PF00294 pfkB family carbohydrate kinase HL41_RS08645 PF01467 Cytidylyltransferase-like HL41_RS08655 PF03734 L,D-transpeptidase catalytic domain HL41_RS08660 PF02569 Pantoate-beta-alanine ligase HL41_RS08665 PF02261 Aspartate decarboxylase HL41_RS08670 PF00919 Uncharacterized protein family UPF0004 HL41_RS08670 PF04055 Radical SAM superfamily HL41_RS08670 PF18693 TRAM domain HL41_RS08675 PF10431 C-terminal, D2-small domain, of ClpB protein HL41_RS08675 PF07724 AAA domain (Cdc48 subfamily) HL41_RS08680 PF00227 Proteasome subunit HL41_RS08685 PF00107 Zinc-binding dehydrogenase HL41_RS08685 PF08240 Alcohol dehydrogenase GroES-like domain HL41_RS08700 PF01032 FecCD transport family HL41_RS08705 PF00005 ABC transporter HL41_RS08715 PF01078 Magnesium chelatase, subunit ChlI HL41_RS08715 PF17863 AAA lid domain HL41_RS08720 PF17863 AAA lid domain HL41_RS08720 PF01078 Magnesium chelatase, subunit ChlI HL41_RS08720 PF13519 von Willebrand factor type A domain HL41_RS08725 PF01139 tRNA-splicing ligase RtcB HL41_RS08745 PF01380 SIS domain HL41_RS08745 PF00571 CBS domain HL41_RS08765 PF00970 Oxidoreductase FAD-binding domain HL41_RS08765 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HL41_RS08765 PF00175 Oxidoreductase NAD-binding domain HL41_RS08770 PF01180 Dihydroorotate dehydrogenase HL41_RS08775 PF01430 Hsp33 protein HL41_RS08785 PF00144 Beta-lactamase HL41_RS08790 PF03807 NADP oxidoreductase coenzyme F420-dependent HL41_RS08790 PF14748 Pyrroline-5-carboxylate reductase dimerisation HL41_RS08795 PF01266 FAD dependent oxidoreductase HL41_RS08795 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HL41_RS08830 PF00374 Nickel-dependent hydrogenase HL41_RS08860 PF00581 Rhodanese-like domain HL41_RS08860 PF01206 Sulfurtransferase TusA HL41_RS08875 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS08880 PF01594 AI-2E family transporter HL41_RS08895 PF10531 SLBB domain HL41_RS08900 PF07963 Prokaryotic N-terminal methylation motif HL41_RS08900 PF14245 Type IV pilin PilA HL41_RS08915 PF04972 BON domain HL41_RS08920 PF12627 Probable RNA and SrmB- binding site of polymerase A HL41_RS08920 PF01743 Poly A polymerase head domain HL41_RS08920 PF12626 Polymerase A arginine-rich C-terminus HL41_RS08925 PF01487 Type I 3-dehydroquinase HL41_RS08930 PF00768 D-alanyl-D-alanine carboxypeptidase HL41_RS08930 PF07943 Penicillin-binding protein 5, C-terminal domain HL41_RS08935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HL41_RS08935 PF00512 His Kinase A (phospho-acceptor) domain HL41_RS08935 PF08448 PAS fold HL41_RS08935 PF13188 PAS domain HL41_RS08935 PF00072 Response regulator receiver domain HL41_RS08995 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS09000 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HL41_RS09005 PF12950 TaqI-like C-terminal specificity domain HL41_RS09005 PF07669 Eco57I restriction-modification methylase HL41_RS09020 PF00196 Bacterial regulatory proteins, luxR family HL41_RS09020 PF00072 Response regulator receiver domain HL41_RS09030 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS09035 PF10410 DnaB-helicase binding domain of primase HL41_RS09035 PF08275 DNA primase catalytic core, N-terminal domain HL41_RS09035 PF01807 CHC2 zinc finger HL41_RS09050 PF00654 Voltage gated chloride channel HL41_RS09055 PF00672 HAMP domain HL41_RS09055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HL41_RS09055 PF17202 Single cache domain 3 HL41_RS09060 PF00360 Phytochrome region HL41_RS09060 PF00990 Diguanylate cyclase, GGDEF domain HL41_RS09060 PF00563 EAL domain HL41_RS09060 PF01590 GAF domain HL41_RS09080 PF00317 Ribonucleotide reductase, all-alpha domain HL41_RS09080 PF03477 ATP cone domain HL41_RS09080 PF02867 Ribonucleotide reductase, barrel domain HL41_RS09090 PF07559 Flagellar basal body protein FlaE HL41_RS09090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HL41_RS09090 PF00460 Flagella basal body rod protein HL41_RS09105 PF11741 AMIN domain HL41_RS09105 PF01520 N-acetylmuramoyl-L-alanine amidase HL41_RS09115 PF01523 Putative modulator of DNA gyrase HL41_RS09120 PF02675 S-adenosylmethionine decarboxylase HL41_RS09150 PF01464 Transglycosylase SLT domain HL41_RS09155 PF00691 OmpA family HL41_RS09165 PF00156 Phosphoribosyl transferase domain HL41_RS09170 PF00571 CBS domain HL41_RS09175 PF10609 NUBPL iron-transfer P-loop NTPase HL41_RS09180 PF03631 Virulence factor BrkB HL41_RS09195 PF00488 MutS domain V HL41_RS09195 PF01713 Smr domain HL41_RS09200 PF02223 Thymidylate kinase HL41_RS09205 PF01476 LysM domain HL41_RS09205 PF00877 NlpC/P60 family