HL41_RS00105	PWY-6004	glycine betaine biosynthesis V (from glycine)
HL41_RS00175	PWY-6012	acyl carrier protein metabolism I
HL41_RS00175	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
HL41_RS00180	PWY-6938	NADH repair
HL41_RS00230	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
HL41_RS00235	PWY-6167	flavin biosynthesis II (archaea)
HL41_RS00235	PWY-6168	flavin biosynthesis III (fungi)
HL41_RS00235	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
HL41_RS00245	PWY-6749	CMP-legionaminate biosynthesis I
HL41_RS00260	PWY-723	alkylnitronates degradation
HL41_RS00265	PWY-5316	nicotine biosynthesis
HL41_RS00265	PWY-7342	superpathway of nicotine biosynthesis
HL41_RS00275	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
HL41_RS00275	PWY-7177	UTP and CTP dephosphorylation II
HL41_RS00275	PWY-7185	UTP and CTP dephosphorylation I
HL41_RS00300	PWY-7560	methylerythritol phosphate pathway II
HL41_RS00305	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
HL41_RS00310	PWY-1622	formaldehyde assimilation I (serine pathway)
HL41_RS00310	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
HL41_RS00310	PWY-5913	TCA cycle VI (obligate autotrophs)
HL41_RS00310	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
HL41_RS00310	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
HL41_RS00310	PWY-6549	L-glutamine biosynthesis III
HL41_RS00310	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
HL41_RS00310	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
HL41_RS00310	PWY-7124	ethylene biosynthesis V (engineered)
HL41_RS00345	PWY-5674	nitrate reduction IV (dissimilatory)
HL41_RS00395	PWY-6823	molybdenum cofactor biosynthesis
HL41_RS00425	PWY-6829	tRNA methylation (yeast)
HL41_RS00425	PWY-7285	methylwyosine biosynthesis
HL41_RS00425	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
HL41_RS00470	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
HL41_RS00475	PWY-6700	queuosine biosynthesis
HL41_RS00480	PWY-2941	L-lysine biosynthesis II
HL41_RS00480	PWY-2942	L-lysine biosynthesis III
HL41_RS00480	PWY-5097	L-lysine biosynthesis VI
HL41_RS00540	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
HL41_RS00570	PWY-6703	preQ<sub>0</sub> biosynthesis
HL41_RS00580	PWY-7731	HL41_RS00580
HL41_RS00585	PWY-4983	L-citrulline-nitric oxide cycle
HL41_RS00585	PWY-4984	urea cycle
HL41_RS00585	PWY-5	canavanine biosynthesis
HL41_RS00585	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
HL41_RS00585	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
HL41_RS00605	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
HL41_RS00625	PWY-1042	glycolysis IV (plant cytosol)
HL41_RS00625	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
HL41_RS00625	PWY-5484	glycolysis II (from fructose 6-phosphate)
HL41_RS00625	PWY-5723	Rubisco shunt
HL41_RS00625	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
HL41_RS00625	PWY-6886	1-butanol autotrophic biosynthesis
HL41_RS00625	PWY-6901	superpathway of glucose and xylose degradation
HL41_RS00625	PWY-7003	glycerol degradation to butanol
HL41_RS00625	PWY-7124	ethylene biosynthesis V (engineered)
HL41_RS00625	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
HL41_RS00630	PWY-5316	nicotine biosynthesis
HL41_RS00630	PWY-7342	superpathway of nicotine biosynthesis
HL41_RS00665	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
HL41_RS00665	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
HL41_RS00665	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
HL41_RS00700	PWY-7560	methylerythritol phosphate pathway II
HL41_RS00715	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
HL41_RS00725	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
HL41_RS00750	PWY-4381	fatty acid biosynthesis initiation I
HL41_RS00800	PWY-6829	tRNA methylation (yeast)
HL41_RS00840	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
HL41_RS00840	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
HL41_RS00840	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
HL41_RS00865	PWY-5669	phosphatidylethanolamine biosynthesis I
HL41_RS00870	PWY-5669	phosphatidylethanolamine biosynthesis I
HL41_RS00880	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
HL41_RS01050	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
HL41_RS01060	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
HL41_RS01075	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
HL41_RS01115	PWY-5316	nicotine biosynthesis
HL41_RS01115	PWY-5381	pyridine nucleotide cycling (plants)
HL41_RS01115	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
HL41_RS01115	PWY-7342	superpathway of nicotine biosynthesis
HL41_RS01130	PWY-7294	xylose degradation IV
HL41_RS01130	PWY-7295	L-arabinose degradation IV
HL41_RS01245	PWY-6891	thiazole biosynthesis II (Bacillus)
HL41_RS01245	PWY-6892	thiazole biosynthesis I (E. coli)
HL41_RS01245	PWY-7560	methylerythritol phosphate pathway II
HL41_RS01260	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
HL41_RS01260	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
HL41_RS01260	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
HL41_RS01265	PWY-6123	inosine-5'-phosphate biosynthesis I
HL41_RS01265	PWY-7234	inosine-5'-phosphate biosynthesis III
HL41_RS01335	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
HL41_RS01335	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
HL41_RS01395	PWY-5269	cardiolipin biosynthesis II
HL41_RS01395	PWY-5668	cardiolipin biosynthesis I
HL41_RS01425	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
HL41_RS01425	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
HL41_RS01425	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
HL41_RS01425	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
HL41_RS01425	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS01425	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS01425	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
HL41_RS01425	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
HL41_RS01495	PWY-1281	sulfoacetaldehyde degradation I
HL41_RS01495	PWY-5482	pyruvate fermentation to acetate II
HL41_RS01495	PWY-5485	pyruvate fermentation to acetate IV
HL41_RS01495	PWY-5497	purine nucleobases degradation II (anaerobic)
HL41_RS01495	PWY-6637	sulfolactate degradation II
HL41_RS01510	PWY-6672	<i>cis</i>-genanyl-CoA degradation
HL41_RS01510	PWY-7118	chitin degradation to ethanol
HL41_RS01525	PWY-6167	flavin biosynthesis II (archaea)
HL41_RS01525	PWY-6168	flavin biosynthesis III (fungi)
HL41_RS01675	PWY-6700	queuosine biosynthesis
HL41_RS01755	PWY-5532	adenosine nucleotides degradation IV
HL41_RS01770	PWY-5958	acridone alkaloid biosynthesis
HL41_RS01770	PWY-6543	4-aminobenzoate biosynthesis
HL41_RS01770	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
HL41_RS01770	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
HL41_RS01875	PWY-6123	inosine-5'-phosphate biosynthesis I
HL41_RS01875	PWY-6124	inosine-5'-phosphate biosynthesis II
HL41_RS01875	PWY-7234	inosine-5'-phosphate biosynthesis III
HL41_RS01885	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
HL41_RS01890	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
HL41_RS01895	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
HL41_RS01905	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
HL41_RS01930	PWY-6599	guanine and guanosine salvage II
HL41_RS01930	PWY-6609	adenine and adenosine salvage III
HL41_RS01930	PWY-6610	adenine and adenosine salvage IV
HL41_RS01930	PWY-6620	guanine and guanosine salvage
HL41_RS01955	PWY-3961	phosphopantothenate biosynthesis II
HL41_RS01970	PWY-3461	L-tyrosine biosynthesis II
HL41_RS01970	PWY-3462	L-phenylalanine biosynthesis II
HL41_RS01970	PWY-6120	L-tyrosine biosynthesis III
HL41_RS01970	PWY-6627	salinosporamide A biosynthesis
HL41_RS01970	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
HL41_RS01970	PWY-7626	bacilysin biosynthesis
HL41_RS02055	PWY-381	nitrate reduction II (assimilatory)
HL41_RS02055	PWY-5675	nitrate reduction V (assimilatory)
HL41_RS02055	PWY-6549	L-glutamine biosynthesis III
HL41_RS02055	PWY-6963	ammonia assimilation cycle I
HL41_RS02055	PWY-6964	ammonia assimilation cycle II
HL41_RS02160	PWY-4981	L-proline biosynthesis II (from arginine)
HL41_RS02160	PWY-4984	urea cycle
HL41_RS02160	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
HL41_RS02205	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
HL41_RS02205	PWY-5368	dimorphecolate biosynthesis
HL41_RS02205	PWY-5995	linoleate biosynthesis I (plants)
HL41_RS02205	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
HL41_RS02205	PWY-6803	phosphatidylcholine acyl editing
HL41_RS02205	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
HL41_RS02205	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
HL41_RS02205	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
HL41_RS02205	PWY-7470	phosphatidylcholine biosynthesis VII
HL41_RS02205	PWY-7618	ricinoleate biosynthesis
HL41_RS02210	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
HL41_RS02250	PWY-3801	sucrose degradation II (sucrose synthase)
HL41_RS02250	PWY-5054	sorbitol biosynthesis I
HL41_RS02250	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
HL41_RS02250	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
HL41_RS02250	PWY-5659	GDP-mannose biosynthesis
HL41_RS02250	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
HL41_RS02250	PWY-621	sucrose degradation III (sucrose invertase)
HL41_RS02250	PWY-622	starch biosynthesis
HL41_RS02250	PWY-6981	chitin biosynthesis
HL41_RS02250	PWY-6992	1,5-anhydrofructose degradation
HL41_RS02250	PWY-7238	sucrose biosynthesis II
HL41_RS02250	PWY-7347	sucrose biosynthesis III
HL41_RS02250	PWY-7385	1,3-propanediol biosynthesis (engineered)
HL41_RS02255	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
HL41_RS02255	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
HL41_RS02335	PWY-1042	glycolysis IV (plant cytosol)
HL41_RS02335	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
HL41_RS02335	PWY-5484	glycolysis II (from fructose 6-phosphate)
HL41_RS02335	PWY-5723	Rubisco shunt
HL41_RS02335	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
HL41_RS02335	PWY-6886	1-butanol autotrophic biosynthesis
HL41_RS02335	PWY-6901	superpathway of glucose and xylose degradation
HL41_RS02335	PWY-7003	glycerol degradation to butanol
HL41_RS02335	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
HL41_RS02335	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
HL41_RS02350	PWY-6123	inosine-5'-phosphate biosynthesis I
HL41_RS02350	PWY-6124	inosine-5'-phosphate biosynthesis II
HL41_RS02350	PWY-7234	inosine-5'-phosphate biosynthesis III
HL41_RS02360	PWY-2161	folate polyglutamylation
HL41_RS02390	PWY-1042	glycolysis IV (plant cytosol)
HL41_RS02390	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
HL41_RS02390	PWY-5484	glycolysis II (from fructose 6-phosphate)
HL41_RS02390	PWY-5723	Rubisco shunt
HL41_RS02390	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
HL41_RS02390	PWY-6886	1-butanol autotrophic biosynthesis
HL41_RS02390	PWY-6901	superpathway of glucose and xylose degradation
HL41_RS02390	PWY-7003	glycerol degradation to butanol
HL41_RS02390	PWY-7124	ethylene biosynthesis V (engineered)
HL41_RS02390	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
HL41_RS02435	PWY-6654	phosphopantothenate biosynthesis III
HL41_RS02575	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
HL41_RS02585	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
HL41_RS02605	PWY-2941	L-lysine biosynthesis II
HL41_RS02605	PWY-2942	L-lysine biosynthesis III
HL41_RS02605	PWY-5097	L-lysine biosynthesis VI
HL41_RS02605	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
HL41_RS02605	PWY-6559	spermidine biosynthesis II
HL41_RS02605	PWY-6562	norspermidine biosynthesis
HL41_RS02605	PWY-7153	grixazone biosynthesis
HL41_RS02605	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
HL41_RS02645	PWY-6749	CMP-legionaminate biosynthesis I
HL41_RS02660	PWY-6614	tetrahydrofolate biosynthesis
HL41_RS02970	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
HL41_RS02980	PWY-4381	fatty acid biosynthesis initiation I
HL41_RS02980	PWY-5743	3-hydroxypropanoate cycle
HL41_RS02980	PWY-5744	glyoxylate assimilation
HL41_RS02980	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
HL41_RS02980	PWY-6679	jadomycin biosynthesis
HL41_RS02980	PWY-6722	candicidin biosynthesis
HL41_RS02980	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
HL41_RS02995	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
HL41_RS02995	PWY-5686	UMP biosynthesis
HL41_RS02995	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
HL41_RS03020	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
HL41_RS03030	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
HL41_RS03135	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
HL41_RS03135	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
HL41_RS03140	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
HL41_RS03140	PWY-6416	quinate degradation II
HL41_RS03140	PWY-6707	gallate biosynthesis
HL41_RS03195	PWY-6703	preQ<sub>0</sub> biosynthesis
HL41_RS03285	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
HL41_RS03285	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
HL41_RS03295	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
HL41_RS03295	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
HL41_RS03295	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS03295	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
HL41_RS03300	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
HL41_RS03300	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
HL41_RS03300	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
HL41_RS03300	PWY-6936	seleno-amino acid biosynthesis
HL41_RS03300	PWY-702	L-methionine biosynthesis II
HL41_RS03365	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
HL41_RS03365	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
HL41_RS03370	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
HL41_RS03370	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
HL41_RS03385	PWY-4983	L-citrulline-nitric oxide cycle
HL41_RS03385	PWY-4984	urea cycle
HL41_RS03385	PWY-5	canavanine biosynthesis
HL41_RS03385	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
HL41_RS03385	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
HL41_RS03390	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
HL41_RS03390	PWY-5723	Rubisco shunt
HL41_RS03430	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
HL41_RS03430	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
HL41_RS03430	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
HL41_RS03430	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS03430	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
HL41_RS03430	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
HL41_RS03430	PWY-7205	CMP phosphorylation
HL41_RS03430	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
HL41_RS03430	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS03430	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
HL41_RS03430	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS03430	PWY-7224	purine deoxyribonucleosides salvage
HL41_RS03430	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
HL41_RS03430	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
HL41_RS03435	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
HL41_RS03435	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
HL41_RS03435	PWY-6896	thiamin salvage I
HL41_RS03435	PWY-6897	thiamin salvage II
HL41_RS03470	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
HL41_RS03470	PWY-6549	L-glutamine biosynthesis III
HL41_RS03470	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
HL41_RS03470	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
HL41_RS03485	PWY-7205	CMP phosphorylation
HL41_RS03495	PWY-6749	CMP-legionaminate biosynthesis I
HL41_RS03525	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
HL41_RS03525	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
HL41_RS03525	PWY-5194	siroheme biosynthesis
HL41_RS03525	PWY-5441	S-methyl-L-methionine cycle
HL41_RS03525	PWY-702	L-methionine biosynthesis II
HL41_RS03525	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
HL41_RS03530	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
HL41_RS03530	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
HL41_RS03540	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
HL41_RS03540	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
HL41_RS03540	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
HL41_RS03550	PWY-1042	glycolysis IV (plant cytosol)
HL41_RS03550	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
HL41_RS03550	PWY-5484	glycolysis II (from fructose 6-phosphate)
HL41_RS03550	PWY-7385	1,3-propanediol biosynthesis (engineered)
HL41_RS03565	PWY-6700	queuosine biosynthesis
HL41_RS03595	PWY-5674	nitrate reduction IV (dissimilatory)
HL41_RS03605	PWY-1341	phenylacetate degradation II (anaerobic)
HL41_RS03605	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
HL41_RS03605	PWY-7716	HL41_RS03605
HL41_RS03690	PWY-5198	factor 420 biosynthesis
HL41_RS03705	PWY-5057	L-valine degradation II
HL41_RS03705	PWY-5076	L-leucine degradation III
HL41_RS03705	PWY-5078	L-isoleucine degradation II
HL41_RS03705	PWY-5101	L-isoleucine biosynthesis II
HL41_RS03705	PWY-5103	L-isoleucine biosynthesis III
HL41_RS03705	PWY-5104	L-isoleucine biosynthesis IV
HL41_RS03705	PWY-5108	L-isoleucine biosynthesis V
HL41_RS03825	PWY-5381	pyridine nucleotide cycling (plants)
HL41_RS03825	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
HL41_RS03830	PWY-381	nitrate reduction II (assimilatory)
HL41_RS03830	PWY-5675	nitrate reduction V (assimilatory)
HL41_RS03830	PWY-6549	L-glutamine biosynthesis III
HL41_RS03830	PWY-6963	ammonia assimilation cycle I
HL41_RS03830	PWY-6964	ammonia assimilation cycle II
HL41_RS03955	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
HL41_RS03970	PWY-5667	CDP-diacylglycerol biosynthesis I
HL41_RS03970	PWY-5981	CDP-diacylglycerol biosynthesis III
HL41_RS03995	PWY-5269	cardiolipin biosynthesis II
HL41_RS03995	PWY-5668	cardiolipin biosynthesis I
HL41_RS04050	PWY-40	putrescine biosynthesis I
HL41_RS04050	PWY-6305	putrescine biosynthesis IV
HL41_RS04055	PWY-6834	spermidine biosynthesis III
HL41_RS04130	PWY-5913	TCA cycle VI (obligate autotrophs)
HL41_RS04130	PWY-6549	L-glutamine biosynthesis III
HL41_RS04130	PWY-6728	methylaspartate cycle
HL41_RS04130	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
HL41_RS04130	PWY-7124	ethylene biosynthesis V (engineered)
HL41_RS04130	PWY-7254	TCA cycle VII (acetate-producers)
HL41_RS04130	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
HL41_RS04180	PWY-4381	fatty acid biosynthesis initiation I
HL41_RS04180	PWY-6799	fatty acid biosynthesis (plant mitochondria)
HL41_RS04180	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
HL41_RS04210	PWY-5941	glycogen degradation II (eukaryotic)
HL41_RS04210	PWY-6724	starch degradation II
HL41_RS04210	PWY-6737	starch degradation V
HL41_RS04210	PWY-7238	sucrose biosynthesis II
HL41_RS04290	PWY-4202	arsenate detoxification I (glutaredoxin)
HL41_RS04290	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
HL41_RS04290	PWY-6608	guanosine nucleotides degradation III
HL41_RS04290	PWY-6609	adenine and adenosine salvage III
HL41_RS04290	PWY-6611	adenine and adenosine salvage V
HL41_RS04290	PWY-6620	guanine and guanosine salvage
HL41_RS04290	PWY-6627	salinosporamide A biosynthesis
HL41_RS04290	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
HL41_RS04290	PWY-7179	purine deoxyribonucleosides degradation I
HL41_RS04290	PWY-7179-1	purine deoxyribonucleosides degradation
HL41_RS04400	PWY-5686	UMP biosynthesis
HL41_RS04410	PWY-6825	phosphatidylcholine biosynthesis V
HL41_RS04480	PWY-5194	siroheme biosynthesis
HL41_RS04480	PWY-5441	S-methyl-L-methionine cycle
HL41_RS04480	PWY-702	L-methionine biosynthesis II
HL41_RS04480	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
HL41_RS04495	PWY-2201	folate transformations I
HL41_RS04495	PWY-5497	purine nucleobases degradation II (anaerobic)
HL41_RS04495	PWY-6167	flavin biosynthesis II (archaea)
HL41_RS04535	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
HL41_RS04565	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
HL41_RS04565	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
HL41_RS04570	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
HL41_RS04575	PWY-6167	flavin biosynthesis II (archaea)
HL41_RS04575	PWY-6168	flavin biosynthesis III (fungi)
HL41_RS04575	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
HL41_RS04615	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
HL41_RS04615	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
HL41_RS04620	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
HL41_RS04620	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
HL41_RS04625	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
HL41_RS04625	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
HL41_RS04625	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
HL41_RS04625	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
HL41_RS04630	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
HL41_RS04630	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
HL41_RS04635	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
HL41_RS04635	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
HL41_RS04635	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
HL41_RS04640	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
HL41_RS04640	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
HL41_RS04660	PWY-2201	folate transformations I
HL41_RS04755	PWY-2201	folate transformations I
HL41_RS04765	PWY-6832	2-aminoethylphosphonate degradation II
HL41_RS04775	PWY-6123	inosine-5'-phosphate biosynthesis I
HL41_RS04775	PWY-6124	inosine-5'-phosphate biosynthesis II
HL41_RS04775	PWY-7234	inosine-5'-phosphate biosynthesis III
HL41_RS04780	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
HL41_RS04780	PWY-622	starch biosynthesis
HL41_RS04800	PWY-5971	palmitate biosynthesis II (bacteria and plants)
HL41_RS04800	PWY-5973	<i>cis</i>-vaccenate biosynthesis
HL41_RS04800	PWY-5989	stearate biosynthesis II (bacteria and plants)
HL41_RS04800	PWY-5994	palmitate biosynthesis I (animals and fungi)
HL41_RS04800	PWY-6113	superpathway of mycolate biosynthesis
HL41_RS04800	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
HL41_RS04800	PWY-6519	8-amino-7-oxononanoate biosynthesis I
HL41_RS04800	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
HL41_RS04800	PWY-7663	gondoate biosynthesis (anaerobic)
HL41_RS04800	PWY-7664	oleate biosynthesis IV (anaerobic)
HL41_RS04800	PWYG-321	mycolate biosynthesis
HL41_RS04825	PWY-5101	L-isoleucine biosynthesis II
HL41_RS04825	PWY-5103	L-isoleucine biosynthesis III
HL41_RS04825	PWY-5104	L-isoleucine biosynthesis IV
HL41_RS04825	PWY-7111	pyruvate fermentation to isobutanol (engineered)
HL41_RS04865	PWY-6683	sulfate reduction III (assimilatory)
HL41_RS04895	PWY-7294	xylose degradation IV
HL41_RS04895	PWY-7295	L-arabinose degradation IV
HL41_RS04895	PWY-7560	methylerythritol phosphate pathway II
HL41_RS04905	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
HL41_RS04905	PWY-5368	dimorphecolate biosynthesis
HL41_RS04905	PWY-5995	linoleate biosynthesis I (plants)
HL41_RS04905	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
HL41_RS04905	PWY-6803	phosphatidylcholine acyl editing
HL41_RS04905	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
HL41_RS04905	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
HL41_RS04905	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
HL41_RS04905	PWY-7470	phosphatidylcholine biosynthesis VII
HL41_RS04905	PWY-7618	ricinoleate biosynthesis
HL41_RS04995	PWY-2781	<i>cis</i>-zeatin biosynthesis
HL41_RS05010	PWY-1622	formaldehyde assimilation I (serine pathway)
HL41_RS05010	PWY-5392	reductive TCA cycle II
HL41_RS05010	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
HL41_RS05010	PWY-5690	TCA cycle II (plants and fungi)
HL41_RS05010	PWY-5913	TCA cycle VI (obligate autotrophs)
HL41_RS05010	PWY-6728	methylaspartate cycle
HL41_RS05010	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
HL41_RS05010	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
HL41_RS05010	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
HL41_RS05060	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
HL41_RS05160	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
HL41_RS05320	PWY-1622	formaldehyde assimilation I (serine pathway)
HL41_RS05320	PWY-181	photorespiration
HL41_RS05320	PWY-2161	folate polyglutamylation
HL41_RS05320	PWY-2201	folate transformations I
HL41_RS05320	PWY-3661	glycine betaine degradation I
HL41_RS05320	PWY-3661-1	glycine betaine degradation II (mammalian)
HL41_RS05320	PWY-3841	folate transformations II
HL41_RS05320	PWY-5497	purine nucleobases degradation II (anaerobic)
HL41_RS05325	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
HL41_RS05400	PWY-2941	L-lysine biosynthesis II
HL41_RS05400	PWY-2942	L-lysine biosynthesis III
HL41_RS05400	PWY-5097	L-lysine biosynthesis VI
HL41_RS05400	PWY-6559	spermidine biosynthesis II
HL41_RS05400	PWY-6562	norspermidine biosynthesis
HL41_RS05400	PWY-7153	grixazone biosynthesis
HL41_RS05405	PWY-5101	L-isoleucine biosynthesis II
HL41_RS05405	PWY-6871	3-methylbutanol biosynthesis
HL41_RS05435	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
HL41_RS05435	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
HL41_RS05465	PWY-5101	L-isoleucine biosynthesis II
HL41_RS05465	PWY-5103	L-isoleucine biosynthesis III
HL41_RS05465	PWY-5104	L-isoleucine biosynthesis IV
HL41_RS05465	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
HL41_RS05465	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
HL41_RS05465	PWY-6389	(<i>S</i>)-acetoin biosynthesis
HL41_RS05465	PWY-7111	pyruvate fermentation to isobutanol (engineered)
HL41_RS05470	PWY-5101	L-isoleucine biosynthesis II
HL41_RS05470	PWY-5103	L-isoleucine biosynthesis III
HL41_RS05470	PWY-5104	L-isoleucine biosynthesis IV
HL41_RS05470	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
HL41_RS05470	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
HL41_RS05470	PWY-6389	(<i>S</i>)-acetoin biosynthesis
HL41_RS05470	PWY-7111	pyruvate fermentation to isobutanol (engineered)
HL41_RS05475	PWY-6891	thiazole biosynthesis II (Bacillus)
HL41_RS05475	PWY-6892	thiazole biosynthesis I (E. coli)
HL41_RS05475	PWY-7560	methylerythritol phosphate pathway II
HL41_RS05495	PWY-5306	superpathway of thiosulfate metabolism (<i>Desulfovibrio sulfodismutans</i>)
HL41_RS05495	PWY-5360	superpathway of tetrathionate reduction (<i>Salmonella typhimurium</i>)
HL41_RS05495	PWY-6683	sulfate reduction III (assimilatory)
HL41_RS05500	PWY-6683	sulfate reduction III (assimilatory)
HL41_RS05560	PWY-5367	petroselinate biosynthesis
HL41_RS05560	PWY-5515	L-arabinose degradation II
HL41_RS05560	PWY-5525	D-glucuronate degradation I
HL41_RS05560	PWY-5676	acetyl-CoA fermentation to butanoate II
HL41_RS05560	PWY-5741	ethylmalonyl-CoA pathway
HL41_RS05560	PWY-5971	palmitate biosynthesis II (bacteria and plants)
HL41_RS05560	PWY-5973	<i>cis</i>-vaccenate biosynthesis
HL41_RS05560	PWY-5989	stearate biosynthesis II (bacteria and plants)
HL41_RS05560	PWY-5994	palmitate biosynthesis I (animals and fungi)
HL41_RS05560	PWY-6113	superpathway of mycolate biosynthesis
HL41_RS05560	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
HL41_RS05560	PWY-6519	8-amino-7-oxononanoate biosynthesis I
HL41_RS05560	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
HL41_RS05560	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
HL41_RS05560	PWY-7663	gondoate biosynthesis (anaerobic)
HL41_RS05560	PWY-7664	oleate biosynthesis IV (anaerobic)
HL41_RS05560	PWYG-321	mycolate biosynthesis
HL41_RS05575	PWY-6871	3-methylbutanol biosynthesis
HL41_RS05610	PWY-5674	nitrate reduction IV (dissimilatory)
HL41_RS05665	PWY-5525	D-glucuronate degradation I
HL41_RS05690	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
HL41_RS05690	PWY-6167	flavin biosynthesis II (archaea)
HL41_RS05690	PWY-6168	flavin biosynthesis III (fungi)
HL41_RS05695	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
HL41_RS05695	PWY-5686	UMP biosynthesis
HL41_RS05695	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
HL41_RS05760	PWY-6654	phosphopantothenate biosynthesis III
HL41_RS05775	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS05775	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS05775	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS05925	PWY-1042	glycolysis IV (plant cytosol)
HL41_RS05925	PWY-5484	glycolysis II (from fructose 6-phosphate)
HL41_RS05925	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
HL41_RS05925	PWY-7003	glycerol degradation to butanol
HL41_RS05930	PWY-1042	glycolysis IV (plant cytosol)
HL41_RS05930	PWY-5484	glycolysis II (from fructose 6-phosphate)
HL41_RS05930	PWY-6886	1-butanol autotrophic biosynthesis
HL41_RS05930	PWY-6901	superpathway of glucose and xylose degradation
HL41_RS05930	PWY-7003	glycerol degradation to butanol
HL41_RS05935	PWY-6167	flavin biosynthesis II (archaea)
HL41_RS05935	PWY-6168	flavin biosynthesis III (fungi)
HL41_RS05950	PWY-5484	glycolysis II (from fructose 6-phosphate)
HL41_RS06030	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
HL41_RS06030	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
HL41_RS06030	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
HL41_RS06035	PWY-5659	GDP-mannose biosynthesis
HL41_RS06035	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
HL41_RS06050	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
HL41_RS06080	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
HL41_RS06160	PWY-3221	dTDP-L-rhamnose biosynthesis II
HL41_RS06160	PWY-6808	dTDP-D-forosamine biosynthesis
HL41_RS06160	PWY-6942	dTDP-D-desosamine biosynthesis
HL41_RS06160	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
HL41_RS06160	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
HL41_RS06160	PWY-6974	dTDP-L-olivose biosynthesis
HL41_RS06160	PWY-6976	dTDP-L-mycarose biosynthesis
HL41_RS06160	PWY-7104	dTDP-L-megosamine biosynthesis
HL41_RS06160	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
HL41_RS06160	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
HL41_RS06160	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
HL41_RS06160	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
HL41_RS06160	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
HL41_RS06160	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
HL41_RS06160	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
HL41_RS06160	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
HL41_RS06160	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
HL41_RS06160	PWY-7688	HL41_RS06160
HL41_RS06170	PWY-3221	dTDP-L-rhamnose biosynthesis II
HL41_RS06170	PWY-6808	dTDP-D-forosamine biosynthesis
HL41_RS06170	PWY-6942	dTDP-D-desosamine biosynthesis
HL41_RS06170	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
HL41_RS06170	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
HL41_RS06170	PWY-6974	dTDP-L-olivose biosynthesis
HL41_RS06170	PWY-6976	dTDP-L-mycarose biosynthesis
HL41_RS06170	PWY-7104	dTDP-L-megosamine biosynthesis
HL41_RS06170	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
HL41_RS06170	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
HL41_RS06170	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
HL41_RS06170	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
HL41_RS06170	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
HL41_RS06170	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
HL41_RS06170	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
HL41_RS06170	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
HL41_RS06170	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
HL41_RS06170	PWY-7688	HL41_RS06170
HL41_RS06180	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
HL41_RS06200	PWY-3821	galactose degradation III
HL41_RS06200	PWY-6317	galactose degradation I (Leloir pathway)
HL41_RS06200	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
HL41_RS06200	PWY-6527	stachyose degradation
HL41_RS06200	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
HL41_RS06200	PWY-7344	UDP-D-galactose biosynthesis
HL41_RS06210	PWY-3341	L-proline biosynthesis III
HL41_RS06210	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
HL41_RS06245	PWY-5381	pyridine nucleotide cycling (plants)
HL41_RS06245	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
HL41_RS06250	PWY-3341	L-proline biosynthesis III
HL41_RS06250	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
HL41_RS06295	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
HL41_RS06335	PWY-1042	glycolysis IV (plant cytosol)
HL41_RS06335	PWY-1622	formaldehyde assimilation I (serine pathway)
HL41_RS06335	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
HL41_RS06335	PWY-5484	glycolysis II (from fructose 6-phosphate)
HL41_RS06335	PWY-5723	Rubisco shunt
HL41_RS06335	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
HL41_RS06335	PWY-6886	1-butanol autotrophic biosynthesis
HL41_RS06335	PWY-6901	superpathway of glucose and xylose degradation
HL41_RS06335	PWY-7003	glycerol degradation to butanol
HL41_RS06335	PWY-7124	ethylene biosynthesis V (engineered)
HL41_RS06335	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
HL41_RS06380	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
HL41_RS06380	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
HL41_RS06405	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
HL41_RS06405	PWY-6596	adenosine nucleotides degradation I
HL41_RS06405	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
HL41_RS06450	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
HL41_RS06455	PWY-7183	pyrimidine nucleobases salvage I
HL41_RS06470	PWY-5941	glycogen degradation II (eukaryotic)
HL41_RS06470	PWY-6724	starch degradation II
HL41_RS06470	PWY-6737	starch degradation V
HL41_RS06470	PWY-7238	sucrose biosynthesis II
HL41_RS06475	PWY-622	starch biosynthesis
HL41_RS06485	PWY-5941	glycogen degradation II (eukaryotic)
HL41_RS06485	PWY-6731	starch degradation III
HL41_RS06485	PWY-6737	starch degradation V
HL41_RS06485	PWY-7238	sucrose biosynthesis II
HL41_RS06500	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
HL41_RS06500	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
HL41_RS06500	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
HL41_RS06525	PWY-6825	phosphatidylcholine biosynthesis V
HL41_RS06545	PWY-6823	molybdenum cofactor biosynthesis
HL41_RS06545	PWY-6891	thiazole biosynthesis II (Bacillus)
HL41_RS06545	PWY-6892	thiazole biosynthesis I (E. coli)
HL41_RS06545	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
HL41_RS06880	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
HL41_RS06880	PWY-6148	tetrahydromethanopterin biosynthesis
HL41_RS06880	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
HL41_RS06880	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
HL41_RS06885	PWY-5097	L-lysine biosynthesis VI
HL41_RS06890	PWY-2301	<i>myo</i>-inositol biosynthesis
HL41_RS06890	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
HL41_RS06890	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
HL41_RS06890	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
HL41_RS06890	PWY-6664	di-myo-inositol phosphate biosynthesis
HL41_RS06900	PWY-5667	CDP-diacylglycerol biosynthesis I
HL41_RS06900	PWY-5981	CDP-diacylglycerol biosynthesis III
HL41_RS06900	PWY-6453	stigma estolide biosynthesis
HL41_RS06900	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
HL41_RS06900	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
HL41_RS06900	PWY-7587	oleate biosynthesis III (cyanobacteria)
HL41_RS06900	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
HL41_RS06905	PWY-5958	acridone alkaloid biosynthesis
HL41_RS06905	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
HL41_RS06905	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
HL41_RS06910	PWY-5958	acridone alkaloid biosynthesis
HL41_RS06910	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
HL41_RS06910	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
HL41_RS06945	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
HL41_RS06945	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
HL41_RS06945	PWY-6897	thiamin salvage II
HL41_RS06945	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
HL41_RS06945	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
HL41_RS06945	PWY-7356	thiamin salvage IV (yeast)
HL41_RS06945	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
HL41_RS07020	PWY-5392	reductive TCA cycle II
HL41_RS07020	PWY-5483	pyruvate fermentation to acetate III
HL41_RS07020	PWY-5535	acetate formation from acetyl-CoA II
HL41_RS07020	PWY-5537	pyruvate fermentation to acetate V
HL41_RS07020	PWY-5538	pyruvate fermentation to acetate VI
HL41_RS07020	PWY-5690	TCA cycle II (plants and fungi)
HL41_RS07020	PWY-5913	TCA cycle VI (obligate autotrophs)
HL41_RS07020	PWY-6728	methylaspartate cycle
HL41_RS07020	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
HL41_RS07020	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
HL41_RS07025	PWY-1281	sulfoacetaldehyde degradation I
HL41_RS07025	PWY-5482	pyruvate fermentation to acetate II
HL41_RS07025	PWY-5485	pyruvate fermentation to acetate IV
HL41_RS07025	PWY-5497	purine nucleobases degradation II (anaerobic)
HL41_RS07025	PWY-6637	sulfolactate degradation II
HL41_RS07105	PWY-5839	menaquinol-7 biosynthesis
HL41_RS07105	PWY-5844	menaquinol-9 biosynthesis
HL41_RS07105	PWY-5849	menaquinol-6 biosynthesis
HL41_RS07105	PWY-5890	menaquinol-10 biosynthesis
HL41_RS07105	PWY-5891	menaquinol-11 biosynthesis
HL41_RS07105	PWY-5892	menaquinol-12 biosynthesis
HL41_RS07105	PWY-5895	menaquinol-13 biosynthesis
HL41_RS07110	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
HL41_RS07110	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
HL41_RS07120	PWY-5198	factor 420 biosynthesis
HL41_RS07120	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
HL41_RS07120	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
HL41_RS07125	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
HL41_RS07125	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
HL41_RS07125	PWY-6268	adenosylcobalamin salvage from cobalamin
HL41_RS07125	PWY-6269	adenosylcobalamin salvage from cobinamide II
HL41_RS07140	PWY-6936	seleno-amino acid biosynthesis
HL41_RS07150	PWY-2201	folate transformations I
HL41_RS07150	PWY-5497	purine nucleobases degradation II (anaerobic)
HL41_RS07155	PWY-5686	UMP biosynthesis
HL41_RS07160	PWY-5686	UMP biosynthesis
HL41_RS07210	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
HL41_RS07210	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
HL41_RS07210	PWY-6936	seleno-amino acid biosynthesis
HL41_RS07210	PWY-702	L-methionine biosynthesis II
HL41_RS07220	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
HL41_RS07220	PWY-5723	Rubisco shunt
HL41_RS07310	PWY-5663	tetrahydrobiopterin biosynthesis I
HL41_RS07310	PWY-5664	tetrahydrobiopterin biosynthesis II
HL41_RS07310	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
HL41_RS07310	PWY-6703	preQ<sub>0</sub> biosynthesis
HL41_RS07310	PWY-6983	tetrahydrobiopterin biosynthesis III
HL41_RS07310	PWY-7442	drosopterin and aurodrosopterin biosynthesis
HL41_RS07325	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
HL41_RS07325	PWY-6435	4-hydroxybenzoate biosynthesis V
HL41_RS07325	PWY-6863	pyruvate fermentation to hexanol
HL41_RS07325	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
HL41_RS07325	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
HL41_RS07325	PWY-6948	sitosterol degradation to androstenedione
HL41_RS07325	PWY-7094	fatty acid salvage
HL41_RS07325	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
HL41_RS07325	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
HL41_RS07325	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
HL41_RS07325	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
HL41_RS07325	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
HL41_RS07325	PWY-735	jasmonic acid biosynthesis
HL41_RS07325	PWY-7606	docosahexaenoate biosynthesis III (mammals)
HL41_RS07325	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
HL41_RS07325	PWY-7726	HL41_RS07325
HL41_RS07335	PWY-2201	folate transformations I
HL41_RS07335	PWY-3841	folate transformations II
HL41_RS07350	PWY-5372	carbon tetrachloride degradation II
HL41_RS07350	PWY-6780	hydrogen production VI
HL41_RS07355	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
HL41_RS07355	PWY-2201	folate transformations I
HL41_RS07355	PWY-3841	folate transformations II
HL41_RS07355	PWY-5030	L-histidine degradation III
HL41_RS07355	PWY-5497	purine nucleobases degradation II (anaerobic)
HL41_RS07355	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
HL41_RS07360	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
HL41_RS07360	PWY-2161	folate polyglutamylation
HL41_RS07360	PWY-2201	folate transformations I
HL41_RS07360	PWY-3841	folate transformations II
HL41_RS07380	PWY-2722	trehalose degradation IV
HL41_RS07380	PWY-2723	trehalose degradation V
HL41_RS07380	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
HL41_RS07380	PWY-5661	GDP-glucose biosynthesis
HL41_RS07380	PWY-621	sucrose degradation III (sucrose invertase)
HL41_RS07380	PWY-7238	sucrose biosynthesis II
HL41_RS07380	PWY-7385	1,3-propanediol biosynthesis (engineered)
HL41_RS07565	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
HL41_RS07565	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
HL41_RS07585	PWY-5269	cardiolipin biosynthesis II
HL41_RS07585	PWY-5668	cardiolipin biosynthesis I
HL41_RS07615	PWY-6164	3-dehydroquinate biosynthesis I
HL41_RS07620	PWY-2941	L-lysine biosynthesis II
HL41_RS07620	PWY-5097	L-lysine biosynthesis VI
HL41_RS07625	PWY-2941	L-lysine biosynthesis II
HL41_RS07625	PWY-2942	L-lysine biosynthesis III
HL41_RS07625	PWY-5097	L-lysine biosynthesis VI
HL41_RS07675	PWY-6825	phosphatidylcholine biosynthesis V
HL41_RS07765	PWY-7560	methylerythritol phosphate pathway II
HL41_RS07790	PWY-6823	molybdenum cofactor biosynthesis
HL41_RS07805	PWY-2941	L-lysine biosynthesis II
HL41_RS07805	PWY-2942	L-lysine biosynthesis III
HL41_RS07805	PWY-5097	L-lysine biosynthesis VI
HL41_RS07825	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
HL41_RS07825	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
HL41_RS07850	PWY-6823	molybdenum cofactor biosynthesis
HL41_RS07940	PWY-5381	pyridine nucleotide cycling (plants)
HL41_RS07940	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
HL41_RS07940	PWY-6596	adenosine nucleotides degradation I
HL41_RS07940	PWY-6606	guanosine nucleotides degradation II
HL41_RS07940	PWY-6607	guanosine nucleotides degradation I
HL41_RS07940	PWY-6608	guanosine nucleotides degradation III
HL41_RS07940	PWY-7185	UTP and CTP dephosphorylation I
HL41_RS07945	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
HL41_RS07985	PWY-2201	folate transformations I
HL41_RS08060	PWY-5392	reductive TCA cycle II
HL41_RS08060	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
HL41_RS08060	PWY-5690	TCA cycle II (plants and fungi)
HL41_RS08060	PWY-5913	TCA cycle VI (obligate autotrophs)
HL41_RS08060	PWY-6728	methylaspartate cycle
HL41_RS08060	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
HL41_RS08060	PWY-7254	TCA cycle VII (acetate-producers)
HL41_RS08060	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
HL41_RS08065	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
HL41_RS08080	PWY-5198	factor 420 biosynthesis
HL41_RS08080	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
HL41_RS08140	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
HL41_RS08140	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
HL41_RS08140	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
HL41_RS08140	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
HL41_RS08145	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
HL41_RS08145	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
HL41_RS08145	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
HL41_RS08145	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
HL41_RS08145	PWY-6978	plastoquinol-9 biosynthesis II
HL41_RS08165	PWY-5674	nitrate reduction IV (dissimilatory)
HL41_RS08180	PWY-1341	phenylacetate degradation II (anaerobic)
HL41_RS08180	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
HL41_RS08180	PWY-7716	HL41_RS08180
HL41_RS08190	PWY-1341	phenylacetate degradation II (anaerobic)
HL41_RS08190	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
HL41_RS08190	PWY-7716	HL41_RS08190
HL41_RS08195	PWY-6823	molybdenum cofactor biosynthesis
HL41_RS08230	PWY-6825	phosphatidylcholine biosynthesis V
HL41_RS08440	PWY-6123	inosine-5'-phosphate biosynthesis I
HL41_RS08440	PWY-6124	inosine-5'-phosphate biosynthesis II
HL41_RS08440	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
HL41_RS08440	PWY-7234	inosine-5'-phosphate biosynthesis III
HL41_RS08480	PWY-5103	L-isoleucine biosynthesis III
HL41_RS08480	PWY-7111	pyruvate fermentation to isobutanol (engineered)
HL41_RS08495	PWY-2201	folate transformations I
HL41_RS08515	PWY-5278	sulfite oxidation III
HL41_RS08515	PWY-5340	sulfate activation for sulfonation
HL41_RS08515	PWY-6683	sulfate reduction III (assimilatory)
HL41_RS08515	PWY-6932	selenate reduction
HL41_RS08530	PWY-5278	sulfite oxidation III
HL41_RS08530	PWY-5279	sulfite oxidation II
HL41_RS08665	PWY-5155	&beta;-alanine biosynthesis III
HL41_RS08790	PWY-3341	L-proline biosynthesis III
HL41_RS08790	PWY-4981	L-proline biosynthesis II (from arginine)
HL41_RS08790	PWY-6344	L-ornithine degradation II (Stickland reaction)
HL41_RS08865	PWY-5350	thiosulfate disproportionation III (rhodanese)
HL41_RS08925	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
HL41_RS08925	PWY-6416	quinate degradation II
HL41_RS08925	PWY-6707	gallate biosynthesis
HL41_RS09080	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS09080	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS09080	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS09085	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS09085	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS09085	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS09120	PWY-6834	spermidine biosynthesis III
HL41_RS09165	PWY-5686	UMP biosynthesis
HL41_RS09185	PWY-6759	hydrogen production III
HL41_RS09185	PWY-6785	hydrogen production VIII
HL41_RS09200	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
HL41_RS09200	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
HL41_RS09200	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
HL41_RS09200	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
HL41_RS09200	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
HL41_RS09200	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
