locus-tag class description TOPB45_RS00010 PF11638 DnaA N-terminal domain TOPB45_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix TOPB45_RS00010 PF00308 Bacterial dnaA protein TOPB45_RS00015 PF02913 FAD linked oxidases, C-terminal domain TOPB45_RS00015 PF01565 FAD binding domain TOPB45_RS00020 PF01171 PP-loop family TOPB45_RS00025 PF01464 Transglycosylase SLT domain TOPB45_RS00030 PF05552 Conserved TM helix TOPB45_RS00030 PF00924 Mechanosensitive ion channel TOPB45_RS00055 PF06750 Bacterial Peptidase A24 N-terminal domain TOPB45_RS00055 PF01478 Type IV leader peptidase family TOPB45_RS00065 PF01256 Carbohydrate kinase TOPB45_RS00065 PF03853 YjeF-related protein N-terminus TOPB45_RS00070 PF01648 4'-phosphopantetheinyl transferase superfamily TOPB45_RS00075 PF02502 Ribose/Galactose Isomerase TOPB45_RS00080 PF02801 Beta-ketoacyl synthase, C-terminal domain TOPB45_RS00080 PF00109 Beta-ketoacyl synthase, N-terminal domain TOPB45_RS00085 PF00550 Phosphopantetheine attachment site TOPB45_RS00100 PF06969 HemN C-terminal domain TOPB45_RS00100 PF04055 Radical SAM superfamily TOPB45_RS00105 PF05175 Methyltransferase small domain TOPB45_RS00115 PF04055 Radical SAM superfamily TOPB45_RS00120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TOPB45_RS00120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TOPB45_RS00120 PF01842 ACT domain TOPB45_RS00125 PF00266 Aminotransferase class-V TOPB45_RS00130 PF03449 Transcription elongation factor, N-terminal TOPB45_RS00130 PF01272 Transcription elongation factor, GreA/GreB, C-term TOPB45_RS00135 PF02142 MGS-like domain TOPB45_RS00135 PF01808 AICARFT/IMPCHase bienzyme TOPB45_RS00140 PF02684 Lipid-A-disaccharide synthetase TOPB45_RS00155 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 TOPB45_RS00155 PF00132 Bacterial transferase hexapeptide (six repeats) TOPB45_RS00160 PF07977 FabA-like domain TOPB45_RS00165 PF17805 AsnC-like ligand binding domain TOPB45_RS00165 PF13404 AsnC-type helix-turn-helix domain TOPB45_RS00175 PF00005 ABC transporter TOPB45_RS00180 PF02405 Permease MlaE TOPB45_RS00185 PF00920 Dehydratase family TOPB45_RS00190 PF01106 NifU-like domain TOPB45_RS00195 PF01192 RNA polymerase Rpb6 TOPB45_RS00200 PF00684 DnaJ central domain TOPB45_RS00200 PF00226 DnaJ domain TOPB45_RS00200 PF01556 DnaJ C terminal domain TOPB45_RS00205 PF01967 MoaC family TOPB45_RS00215 PF17760 UvrA interaction domain TOPB45_RS00215 PF17755 UvrA DNA-binding domain TOPB45_RS00215 PF00005 ABC transporter TOPB45_RS00220 PF00478 IMP dehydrogenase / GMP reductase domain TOPB45_RS00220 PF00571 CBS domain TOPB45_RS00235 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TOPB45_RS00235 PF13288 DXP reductoisomerase C-terminal domain TOPB45_RS00235 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TOPB45_RS00240 PF02163 Peptidase family M50 TOPB45_RS00240 PF17820 PDZ domain TOPB45_RS00245 PF00814 Glycoprotease family TOPB45_RS00250 PF00528 Binding-protein-dependent transport system inner membrane component TOPB45_RS00255 PF12911 N-terminal TM domain of oligopeptide transport permease C TOPB45_RS00255 PF00528 Binding-protein-dependent transport system inner membrane component TOPB45_RS00265 PF00209 Sodium:neurotransmitter symporter family TOPB45_RS00280 PF02954 Bacterial regulatory protein, Fis family TOPB45_RS00280 PF00158 Sigma-54 interaction domain TOPB45_RS00280 PF06490 Flagellar regulatory protein FleQ TOPB45_RS00290 PF00158 Sigma-54 interaction domain TOPB45_RS00290 PF02954 Bacterial regulatory protein, Fis family TOPB45_RS00290 PF00072 Response regulator receiver domain TOPB45_RS00295 PF00460 Flagella basal body rod protein TOPB45_RS00300 PF00460 Flagella basal body rod protein TOPB45_RS00300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TOPB45_RS00305 PF02049 Flagellar hook-basal body complex protein FliE TOPB45_RS00310 PF01514 Secretory protein of YscJ/FliF family TOPB45_RS00310 PF08345 Flagellar M-ring protein C-terminal TOPB45_RS00315 PF14841 FliG middle domain TOPB45_RS00315 PF14842 FliG N-terminal domain TOPB45_RS00315 PF01706 FliG C-terminal domain TOPB45_RS00325 PF02874 ATP synthase alpha/beta family, beta-barrel domain TOPB45_RS00325 PF18269 T3SS EscN ATPase C-terminal domain TOPB45_RS00325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TOPB45_RS00340 PF00902 Sec-independent protein translocase protein (TatC) TOPB45_RS00355 PF00216 Bacterial DNA-binding protein TOPB45_RS00360 PF06827 Zinc finger found in FPG and IleRS TOPB45_RS00360 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TOPB45_RS00360 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TOPB45_RS00365 PF01594 AI-2E family transporter TOPB45_RS00380 PF08544 GHMP kinases C terminal TOPB45_RS00380 PF00288 GHMP kinases N terminal domain TOPB45_RS00385 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TOPB45_RS00385 PF14572 Phosphoribosyl synthetase-associated domain TOPB45_RS00390 PF01386 Ribosomal L25p family TOPB45_RS00390 PF14693 Ribosomal protein TL5, C-terminal domain TOPB45_RS00395 PF01195 Peptidyl-tRNA hydrolase TOPB45_RS00405 PF02540 NAD synthase TOPB45_RS00405 PF00117 Glutamine amidotransferase class-I TOPB45_RS00405 PF00958 GMP synthase C terminal domain TOPB45_RS00425 PF01783 Ribosomal L32p protein family TOPB45_RS00430 PF02504 Fatty acid synthesis protein TOPB45_RS00435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TOPB45_RS00435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TOPB45_RS00445 PF00460 Flagella basal body rod protein TOPB45_RS00445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TOPB45_RS00445 PF07559 Flagellar basal body protein FlaE TOPB45_RS00450 PF03963 Flagellar hook capping protein - N-terminal region TOPB45_RS00460 PF00361 Proton-conducting membrane transporter TOPB45_RS00465 PF00361 Proton-conducting membrane transporter TOPB45_RS00465 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus TOPB45_RS00470 PF00361 Proton-conducting membrane transporter TOPB45_RS00470 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TOPB45_RS00475 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TOPB45_RS00480 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TOPB45_RS00485 PF12838 4Fe-4S dicluster domain TOPB45_RS00490 PF00146 NADH dehydrogenase TOPB45_RS00495 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TOPB45_RS00500 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TOPB45_RS00505 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TOPB45_RS00510 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TOPB45_RS00515 PF12800 4Fe-4S binding domain TOPB45_RS00515 PF13247 4Fe-4S dicluster domain TOPB45_RS00525 PF13380 CoA binding domain TOPB45_RS00530 PF00121 Triosephosphate isomerase TOPB45_RS00535 PF00162 Phosphoglycerate kinase TOPB45_RS00540 PF00885 6,7-dimethyl-8-ribityllumazine synthase TOPB45_RS00555 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TOPB45_RS00555 PF02896 PEP-utilising enzyme, TIM barrel domain TOPB45_RS00555 PF00391 PEP-utilising enzyme, mobile domain TOPB45_RS00560 PF01668 SmpB protein TOPB45_RS00565 PF13476 AAA domain TOPB45_RS00570 PF12804 MobA-like NTP transferase domain TOPB45_RS00575 PF00072 Response regulator receiver domain TOPB45_RS00575 PF01966 HD domain TOPB45_RS00595 PF02621 Menaquinone biosynthesis TOPB45_RS00600 PF01618 MotA/TolQ/ExbB proton channel family TOPB45_RS00605 PF00085 Thioredoxin TOPB45_RS00610 PF13525 Outer membrane lipoprotein TOPB45_RS00620 PF07517 SecA DEAD-like domain TOPB45_RS00620 PF01043 SecA preprotein cross-linking domain TOPB45_RS00620 PF07516 SecA Wing and Scaffold domain TOPB45_RS00620 PF02810 SEC-C motif TOPB45_RS00625 PF01142 tRNA pseudouridine synthase D (TruD) TOPB45_RS00630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) TOPB45_RS00640 PF00591 Glycosyl transferase family, a/b domain TOPB45_RS00640 PF02885 Glycosyl transferase family, helical bundle domain TOPB45_RS00645 PF01523 Putative modulator of DNA gyrase TOPB45_RS00650 PF03952 Enolase, N-terminal domain TOPB45_RS00650 PF00113 Enolase, C-terminal TIM barrel domain TOPB45_RS00655 PF01467 Cytidylyltransferase-like TOPB45_RS00655 PF00294 pfkB family carbohydrate kinase TOPB45_RS00660 PF00154 recA bacterial DNA recombination protein TOPB45_RS00665 PF01728 FtsJ-like methyltransferase TOPB45_RS00670 PF12320 Type 5 capsule protein repressor C-terminal domain TOPB45_RS00670 PF00149 Calcineurin-like phosphoesterase TOPB45_RS00675 PF01113 Dihydrodipicolinate reductase, N-terminus TOPB45_RS00675 PF05173 Dihydrodipicolinate reductase, C-terminus TOPB45_RS00680 PF10609 NUBPL iron-transfer P-loop NTPase TOPB45_RS00695 PF01177 Asp/Glu/Hydantoin racemase TOPB45_RS00700 PF00202 Aminotransferase class-III TOPB45_RS00705 PF04055 Radical SAM superfamily TOPB45_RS00705 PF00919 Uncharacterized protein family UPF0004 TOPB45_RS00705 PF18693 TRAM domain TOPB45_RS00720 PF00753 Metallo-beta-lactamase superfamily TOPB45_RS00725 PF04493 Endonuclease V TOPB45_RS00730 PF02384 N-6 DNA Methylase TOPB45_RS00745 PF01420 Type I restriction modification DNA specificity domain TOPB45_RS00760 PF11867 Domain of unknown function (DUF3387) TOPB45_RS00760 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TOPB45_RS00760 PF18766 SWI2/SNF2 ATPase TOPB45_RS00765 PF01741 Large-conductance mechanosensitive channel, MscL TOPB45_RS00775 PF00258 Flavodoxin TOPB45_RS00775 PF01613 Flavin reductase like domain TOPB45_RS00785 PF09350 Domain of unknown function (DUF1992) TOPB45_RS00790 PF01872 RibD C-terminal domain TOPB45_RS00790 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TOPB45_RS00795 PF01121 Dephospho-CoA kinase TOPB45_RS00800 PF00849 RNA pseudouridylate synthase TOPB45_RS00800 PF01479 S4 domain TOPB45_RS00810 PF01551 Peptidase family M23 TOPB45_RS00810 PF08525 Opacity-associated protein A N-terminal motif TOPB45_RS00810 PF01476 LysM domain TOPB45_RS00815 PF00312 Ribosomal protein S15 TOPB45_RS00820 PF04998 RNA polymerase Rpb1, domain 5 TOPB45_RS00820 PF05000 RNA polymerase Rpb1, domain 4 TOPB45_RS00820 PF04983 RNA polymerase Rpb1, domain 3 TOPB45_RS00820 PF04997 RNA polymerase Rpb1, domain 1 TOPB45_RS00820 PF00623 RNA polymerase Rpb1, domain 2 TOPB45_RS00825 PF00562 RNA polymerase Rpb2, domain 6 TOPB45_RS00825 PF04563 RNA polymerase beta subunit TOPB45_RS00825 PF04561 RNA polymerase Rpb2, domain 2 TOPB45_RS00825 PF04560 RNA polymerase Rpb2, domain 7 TOPB45_RS00825 PF10385 RNA polymerase beta subunit external 1 domain TOPB45_RS00825 PF04565 RNA polymerase Rpb2, domain 3 TOPB45_RS00830 PF00542 Ribosomal protein L7/L12 C-terminal domain TOPB45_RS00830 PF16320 Ribosomal protein L7/L12 dimerisation domain TOPB45_RS00835 PF00466 Ribosomal protein L10 TOPB45_RS00840 PF00687 Ribosomal protein L1p/L10e family TOPB45_RS00845 PF00298 Ribosomal protein L11, RNA binding domain TOPB45_RS00845 PF03946 Ribosomal protein L11, N-terminal domain TOPB45_RS00850 PF00467 KOW motif TOPB45_RS00850 PF02357 Transcription termination factor nusG TOPB45_RS00855 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TOPB45_RS00865 PF00471 Ribosomal protein L33 TOPB45_RS00870 PF03143 Elongation factor Tu C-terminal domain TOPB45_RS00870 PF00009 Elongation factor Tu GTP binding domain TOPB45_RS00870 PF03144 Elongation factor Tu domain 2 TOPB45_RS00895 PF01593 Flavin containing amine oxidoreductase TOPB45_RS00900 PF14537 Cytochrome c3 TOPB45_RS00900 PF00890 FAD binding domain TOPB45_RS00905 PF00890 FAD binding domain TOPB45_RS00910 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit TOPB45_RS00910 PF13187 4Fe-4S dicluster domain TOPB45_RS00920 PF14306 PUA-like domain TOPB45_RS00920 PF01747 ATP-sulfurylase TOPB45_RS00925 PF00348 Polyprenyl synthetase TOPB45_RS00935 PF13361 UvrD-like helicase C-terminal domain TOPB45_RS00935 PF00580 UvrD/REP helicase N-terminal domain TOPB45_RS00940 PF04452 RNA methyltransferase TOPB45_RS00955 PF00582 Universal stress protein family TOPB45_RS00960 PF03796 DnaB-like helicase C terminal domain TOPB45_RS00960 PF00772 DnaB-like helicase N terminal domain TOPB45_RS00965 PF01281 Ribosomal protein L9, N-terminal domain TOPB45_RS00965 PF03948 Ribosomal protein L9, C-terminal domain TOPB45_RS00970 PF01084 Ribosomal protein S18 TOPB45_RS00975 PF01250 Ribosomal protein S6 TOPB45_RS00985 PF00293 NUDIX domain TOPB45_RS00990 PF10397 Adenylosuccinate lyase C-terminus TOPB45_RS00990 PF00206 Lyase TOPB45_RS00995 PF00877 NlpC/P60 family TOPB45_RS00995 PF01476 LysM domain TOPB45_RS01000 PF00990 Diguanylate cyclase, GGDEF domain TOPB45_RS01000 PF07694 5TMR of 5TMR-LYT TOPB45_RS01010 PF01380 SIS domain TOPB45_RS01010 PF00571 CBS domain TOPB45_RS01030 PF01139 tRNA-splicing ligase RtcB TOPB45_RS01035 PF00227 Proteasome subunit TOPB45_RS01040 PF10431 C-terminal, D2-small domain, of ClpB protein TOPB45_RS01040 PF07724 AAA domain (Cdc48 subfamily) TOPB45_RS01045 PF04055 Radical SAM superfamily TOPB45_RS01045 PF18693 TRAM domain TOPB45_RS01045 PF00919 Uncharacterized protein family UPF0004 TOPB45_RS01050 PF02261 Aspartate decarboxylase TOPB45_RS01055 PF02569 Pantoate-beta-alanine ligase TOPB45_RS01065 PF01894 Uncharacterised protein family UPF0047 TOPB45_RS01075 PF00682 HMGL-like TOPB45_RS01075 PF08502 LeuA allosteric (dimerisation) domain TOPB45_RS01080 PF18152 DAHP synthase ferredoxin-like domain TOPB45_RS01080 PF00793 DAHP synthetase I family TOPB45_RS01100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TOPB45_RS01100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TOPB45_RS01100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TOPB45_RS01100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TOPB45_RS01115 PF00056 lactate/malate dehydrogenase, NAD binding domain TOPB45_RS01115 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TOPB45_RS01120 PF01119 DNA mismatch repair protein, C-terminal domain TOPB45_RS01120 PF08676 MutL C terminal dimerisation domain TOPB45_RS01135 PF01040 UbiA prenyltransferase family TOPB45_RS01140 PF13614 AAA domain TOPB45_RS01155 PF00440 Bacterial regulatory proteins, tetR family TOPB45_RS01160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TOPB45_RS01165 PF00873 AcrB/AcrD/AcrF family TOPB45_RS01170 PF02321 Outer membrane efflux protein TOPB45_RS01180 PF02675 S-adenosylmethionine decarboxylase TOPB45_RS01185 PF17284 Spermidine synthase tetramerisation domain TOPB45_RS01200 PF05681 Fumarate hydratase (Fumerase) TOPB45_RS01205 PF00933 Glycosyl hydrolase family 3 N terminal domain TOPB45_RS01210 PF00266 Aminotransferase class-V TOPB45_RS01215 PF17915 Reverse gyrase zinc finger TOPB45_RS01215 PF01751 Toprim domain TOPB45_RS01215 PF00270 DEAD/DEAH box helicase TOPB45_RS01215 PF01131 DNA topoisomerase TOPB45_RS01220 PF01578 Cytochrome C assembly protein TOPB45_RS01225 PF00912 Transglycosylase TOPB45_RS01225 PF00905 Penicillin binding protein transpeptidase domain TOPB45_RS01260 PF08448 PAS fold TOPB45_RS01260 PF00563 EAL domain TOPB45_RS01260 PF00990 Diguanylate cyclase, GGDEF domain TOPB45_RS01265 PF02254 TrkA-N domain TOPB45_RS01265 PF02080 TrkA-C domain TOPB45_RS01265 PF00999 Sodium/hydrogen exchanger family TOPB45_RS01270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TOPB45_RS01270 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TOPB45_RS01275 PF02542 YgbB family TOPB45_RS01280 PF00107 Zinc-binding dehydrogenase TOPB45_RS01280 PF08240 Alcohol dehydrogenase GroES-like domain TOPB45_RS01285 PF00436 Single-strand binding protein family TOPB45_RS01290 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TOPB45_RS01290 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TOPB45_RS01290 PF01488 Shikimate / quinate 5-dehydrogenase TOPB45_RS01295 PF01578 Cytochrome C assembly protein TOPB45_RS01305 PF04055 Radical SAM superfamily TOPB45_RS01325 PF00472 RF-1 domain TOPB45_RS01325 PF03462 PCRF domain TOPB45_RS01330 PF01197 Ribosomal protein L31 TOPB45_RS01340 PF00132 Bacterial transferase hexapeptide (six repeats) TOPB45_RS01340 PF12804 MobA-like NTP transferase domain TOPB45_RS01345 PF05698 Bacterial trigger factor protein (TF) C-terminus TOPB45_RS01355 PF17820 PDZ domain TOPB45_RS01355 PF13180 PDZ domain TOPB45_RS01365 PF02565 Recombination protein O C terminal TOPB45_RS01365 PF11967 Recombination protein O N terminal TOPB45_RS01370 PF03641 Possible lysine decarboxylase TOPB45_RS01375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TOPB45_RS01375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TOPB45_RS01380 PF01979 Amidohydrolase family TOPB45_RS01385 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase TOPB45_RS01390 PF17969 L,D-transpeptidase C-terminal domain TOPB45_RS01390 PF03734 L,D-transpeptidase catalytic domain TOPB45_RS01395 PF00291 Pyridoxal-phosphate dependent enzyme TOPB45_RS01410 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TOPB45_RS01415 PF04055 Radical SAM superfamily TOPB45_RS01420 PF01979 Amidohydrolase family TOPB45_RS01430 PF01209 ubiE/COQ5 methyltransferase family TOPB45_RS01445 PF16123 Hydroxyacylglutathione hydrolase C-terminus TOPB45_RS01445 PF00753 Metallo-beta-lactamase superfamily TOPB45_RS01450 PF01513 ATP-NAD kinase TOPB45_RS01465 PF11897 Protein of unknown function (DUF3417) TOPB45_RS01465 PF00343 Carbohydrate phosphorylase TOPB45_RS01475 PF13439 Glycosyltransferase Family 4 TOPB45_RS01475 PF00534 Glycosyl transferases group 1 TOPB45_RS01485 PF06071 Protein of unknown function (DUF933) TOPB45_RS01485 PF01926 50S ribosome-binding GTPase TOPB45_RS01495 PF00156 Phosphoribosyl transferase domain TOPB45_RS01500 PF01964 Radical SAM ThiC family TOPB45_RS01510 PF07690 Major Facilitator Superfamily TOPB45_RS01545 PF00342 Phosphoglucose isomerase TOPB45_RS01550 PF00490 Delta-aminolevulinic acid dehydratase TOPB45_RS01555 PF05036 Sporulation related domain TOPB45_RS01555 PF03330 Lytic transglycolase TOPB45_RS01560 PF14622 Ribonuclease-III-like TOPB45_RS01560 PF00035 Double-stranded RNA binding motif TOPB45_RS01565 PF07650 KH domain TOPB45_RS01565 PF01926 50S ribosome-binding GTPase TOPB45_RS01570 PF04316 Anti-sigma-28 factor, FlgM TOPB45_RS01575 PF01467 Cytidylyltransferase-like TOPB45_RS01575 PF00294 pfkB family carbohydrate kinase TOPB45_RS01580 PF00156 Phosphoribosyl transferase domain TOPB45_RS01585 PF07687 Peptidase dimerisation domain TOPB45_RS01585 PF01546 Peptidase family M20/M25/M40 TOPB45_RS01590 PF00708 Acylphosphatase TOPB45_RS01615 PF02374 Anion-transporting ATPase TOPB45_RS01615 PF17886 HSP20-like domain found in ArsA TOPB45_RS01620 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF TOPB45_RS01620 PF01029 NusB family TOPB45_RS01620 PF01189 16S rRNA methyltransferase RsmB/F TOPB45_RS01625 PF12344 Ultra-violet resistance protein B TOPB45_RS01625 PF04851 Type III restriction enzyme, res subunit TOPB45_RS01625 PF00271 Helicase conserved C-terminal domain TOPB45_RS01625 PF02151 UvrB/uvrC motif TOPB45_RS01625 PF17757 UvrB interaction domain TOPB45_RS01640 PF04055 Radical SAM superfamily TOPB45_RS01645 PF02581 Thiamine monophosphate synthase TOPB45_RS01665 PF12706 Beta-lactamase superfamily domain TOPB45_RS01675 PF00072 Response regulator receiver domain TOPB45_RS01675 PF00990 Diguanylate cyclase, GGDEF domain TOPB45_RS01685 PF00483 Nucleotidyl transferase TOPB45_RS01685 PF01050 Mannose-6-phosphate isomerase TOPB45_RS01750 PF01943 Polysaccharide biosynthesis protein TOPB45_RS01760 PF03275 UDP-galactopyranose mutase TOPB45_RS01770 PF00535 Glycosyl transferase family 2 TOPB45_RS01780 PF00483 Nucleotidyl transferase TOPB45_RS01800 PF00534 Glycosyl transferases group 1 TOPB45_RS01800 PF13439 Glycosyltransferase Family 4 TOPB45_RS01820 PF00534 Glycosyl transferases group 1 TOPB45_RS01820 PF13439 Glycosyltransferase Family 4 TOPB45_RS01825 PF00483 Nucleotidyl transferase TOPB45_RS01830 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system TOPB45_RS01840 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TOPB45_RS01845 PF16363 GDP-mannose 4,6 dehydratase TOPB45_RS01850 PF04321 RmlD substrate binding domain TOPB45_RS01870 PF02397 Bacterial sugar transferase TOPB45_RS01875 PF07992 Pyridine nucleotide-disulphide oxidoreductase TOPB45_RS01890 PF10531 SLBB domain TOPB45_RS01890 PF02563 Polysaccharide biosynthesis/export protein TOPB45_RS01910 PF02152 Dihydroneopterin aldolase TOPB45_RS01910 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TOPB45_RS01915 PF00155 Aminotransferase class I and II TOPB45_RS01920 PF01658 Myo-inositol-1-phosphate synthase TOPB45_RS01925 PF00521 DNA gyrase/topoisomerase IV, subunit A TOPB45_RS01925 PF03989 DNA gyrase C-terminal domain, beta-propeller TOPB45_RS01935 PF00117 Glutamine amidotransferase class-I TOPB45_RS01935 PF02885 Glycosyl transferase family, helical bundle domain TOPB45_RS01935 PF00591 Glycosyl transferase family, a/b domain TOPB45_RS01940 PF04715 Anthranilate synthase component I, N terminal region TOPB45_RS01940 PF00425 chorismate binding enzyme TOPB45_RS01945 PF03129 Anticodon binding domain TOPB45_RS01945 PF13393 Histidyl-tRNA synthetase TOPB45_RS01950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TOPB45_RS01950 PF07992 Pyridine nucleotide-disulphide oxidoreductase TOPB45_RS01955 PF07670 Nucleoside recognition TOPB45_RS01955 PF07664 Ferrous iron transport protein B C terminus TOPB45_RS01955 PF02421 Ferrous iron transport protein B TOPB45_RS01960 PF01321 Creatinase/Prolidase N-terminal domain TOPB45_RS01960 PF00557 Metallopeptidase family M24 TOPB45_RS01965 PF08369 Proto-chlorophyllide reductase 57 kD subunit TOPB45_RS01965 PF00148 Nitrogenase component 1 type Oxidoreductase TOPB45_RS01980 PF01814 Hemerythrin HHE cation binding domain TOPB45_RS01980 PF04405 Domain of Unknown function (DUF542) TOPB45_RS02000 PF04551 GcpE protein TOPB45_RS02005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TOPB45_RS02010 PF00593 TonB dependent receptor TOPB45_RS02010 PF07715 TonB-dependent Receptor Plug Domain TOPB45_RS02030 PF02899 Phage integrase, N-terminal SAM-like domain TOPB45_RS02030 PF00589 Phage integrase family TOPB45_RS02040 PF07992 Pyridine nucleotide-disulphide oxidoreductase TOPB45_RS02045 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit TOPB45_RS02045 PF04060 Putative Fe-S cluster TOPB45_RS02050 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit TOPB45_RS02050 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain TOPB45_RS02055 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit TOPB45_RS02060 PF02574 Homocysteine S-methyltransferase TOPB45_RS02060 PF02219 Methylenetetrahydrofolate reductase TOPB45_RS02070 PF03063 Prismane/CO dehydrogenase family TOPB45_RS02075 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TOPB45_RS02075 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TOPB45_RS02080 PF01268 Formate--tetrahydrofolate ligase TOPB45_RS02085 PF01370 NAD dependent epimerase/dehydratase family TOPB45_RS02090 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TOPB45_RS02090 PF17768 RecJ OB domain TOPB45_RS02090 PF02272 DHHA1 domain TOPB45_RS02090 PF01368 DHH family TOPB45_RS02095 PF13286 Phosphohydrolase-associated domain TOPB45_RS02095 PF01966 HD domain TOPB45_RS02110 PF00582 Universal stress protein family TOPB45_RS02115 PF00857 Isochorismatase family TOPB45_RS02120 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TOPB45_RS02120 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain TOPB45_RS02120 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TOPB45_RS02130 PF05193 Peptidase M16 inactive domain TOPB45_RS02130 PF00675 Insulinase (Peptidase family M16) TOPB45_RS02135 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TOPB45_RS02140 PF02685 Glucokinase TOPB45_RS02150 PF00691 OmpA family TOPB45_RS02165 PF02881 SRP54-type protein, helical bundle domain TOPB45_RS02165 PF00448 SRP54-type protein, GTPase domain TOPB45_RS02180 PF01300 Telomere recombination TOPB45_RS02180 PF07503 HypF finger TOPB45_RS02180 PF17788 HypF Kae1-like domain TOPB45_RS02180 PF00708 Acylphosphatase TOPB45_RS02185 PF00149 Calcineurin-like phosphoesterase TOPB45_RS02190 PF01557 Fumarylacetoacetate (FAA) hydrolase family TOPB45_RS02195 PF04055 Radical SAM superfamily TOPB45_RS02195 PF13186 Iron-sulfur cluster-binding domain TOPB45_RS02200 PF04127 DNA / pantothenate metabolism flavoprotein TOPB45_RS02200 PF02441 Flavoprotein TOPB45_RS02215 PF00171 Aldehyde dehydrogenase family TOPB45_RS02220 PF01467 Cytidylyltransferase-like TOPB45_RS02225 PF05192 MutS domain III TOPB45_RS02225 PF00488 MutS domain V TOPB45_RS02225 PF01624 MutS domain I TOPB45_RS02225 PF05190 MutS family domain IV TOPB45_RS02225 PF05188 MutS domain II TOPB45_RS02235 PF07075 Protein of unknown function (DUF1343) TOPB45_RS02245 PF01926 50S ribosome-binding GTPase TOPB45_RS02245 PF01018 GTP1/OBG TOPB45_RS02250 PF00696 Amino acid kinase family TOPB45_RS02250 PF01472 PUA domain TOPB45_RS02255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TOPB45_RS02255 PF07733 Bacterial DNA polymerase III alpha NTPase domain TOPB45_RS02255 PF02811 PHP domain TOPB45_RS02255 PF14579 Helix-hairpin-helix motif TOPB45_RS02265 PF04453 LPS transport system D TOPB45_RS02265 PF03968 OstA-like protein TOPB45_RS02270 PF02590 Predicted SPOUT methyltransferase TOPB45_RS02275 PF00850 Histone deacetylase domain TOPB45_RS02280 PF13533 Biotin-lipoyl like TOPB45_RS02285 PF00005 ABC transporter TOPB45_RS02290 PF00005 ABC transporter TOPB45_RS02340 PF00291 Pyridoxal-phosphate dependent enzyme TOPB45_RS02345 PF00290 Tryptophan synthase alpha chain TOPB45_RS02350 PF01761 3-dehydroquinate synthase TOPB45_RS02355 PF01678 Diaminopimelate epimerase TOPB45_RS02360 PF00701 Dihydrodipicolinate synthetase family TOPB45_RS02365 PF00465 Iron-containing alcohol dehydrogenase TOPB45_RS02385 PF00486 Transcriptional regulatory protein, C terminal TOPB45_RS02385 PF00072 Response regulator receiver domain TOPB45_RS02390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPB45_RS02390 PF00672 HAMP domain TOPB45_RS02390 PF18698 Histidine kinase sensor domain TOPB45_RS02390 PF00989 PAS fold TOPB45_RS02390 PF00512 His Kinase A (phospho-acceptor) domain TOPB45_RS02395 PF00563 EAL domain TOPB45_RS02395 PF00990 Diguanylate cyclase, GGDEF domain TOPB45_RS02395 PF03707 Bacterial signalling protein N terminal repeat TOPB45_RS02400 PF02649 Type I GTP cyclohydrolase folE2 TOPB45_RS02410 PF02492 CobW/HypB/UreG, nucleotide-binding domain TOPB45_RS02415 PF02769 AIR synthase related protein, C-terminal domain TOPB45_RS02415 PF00586 AIR synthase related protein, N-terminal domain TOPB45_RS02420 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TOPB45_RS02425 PF01750 Hydrogenase maturation protease TOPB45_RS02430 PF00582 Universal stress protein family TOPB45_RS02445 PF08279 HTH domain TOPB45_RS02445 PF03099 Biotin/lipoate A/B protein ligase family TOPB45_RS02445 PF02237 Biotin protein ligase C terminal domain TOPB45_RS02460 PF14437 MafB19-like deaminase TOPB45_RS02470 PF04002 RadC-like JAB domain TOPB45_RS02485 PF00793 DAHP synthetase I family TOPB45_RS02510 PF00534 Glycosyl transferases group 1 TOPB45_RS02520 PF00982 Glycosyltransferase family 20 TOPB45_RS02530 PF00764 Arginosuccinate synthase TOPB45_RS02535 PF00923 Transaldolase/Fructose-6-phosphate aldolase TOPB45_RS02540 PF01569 PAP2 superfamily TOPB45_RS02550 PF18073 Rubredoxin metal binding domain TOPB45_RS02560 PF00977 Histidine biosynthesis protein TOPB45_RS02570 PF02146 Sir2 family TOPB45_RS02575 PF03091 CutA1 divalent ion tolerance protein TOPB45_RS02580 PF00994 Probable molybdopterin binding domain TOPB45_RS02580 PF03454 MoeA C-terminal region (domain IV) TOPB45_RS02580 PF03453 MoeA N-terminal region (domain I and II) TOPB45_RS02585 PF00384 Molybdopterin oxidoreductase TOPB45_RS02585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TOPB45_RS02585 PF01568 Molydopterin dinucleotide binding domain TOPB45_RS02590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TOPB45_RS02590 PF00384 Molybdopterin oxidoreductase TOPB45_RS02590 PF01568 Molydopterin dinucleotide binding domain TOPB45_RS02595 PF13247 4Fe-4S dicluster domain TOPB45_RS02605 PF12728 Helix-turn-helix domain TOPB45_RS02605 PF12727 PBP superfamily domain TOPB45_RS02610 PF03631 Virulence factor BrkB TOPB45_RS02620 PF01063 Amino-transferase class IV TOPB45_RS02635 PF04055 Radical SAM superfamily TOPB45_RS02640 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 TOPB45_RS02640 PF00535 Glycosyl transferase family 2 TOPB45_RS02655 PF00534 Glycosyl transferases group 1 TOPB45_RS02655 PF13439 Glycosyltransferase Family 4 TOPB45_RS02665 PF00534 Glycosyl transferases group 1 TOPB45_RS02665 PF13439 Glycosyltransferase Family 4 TOPB45_RS02680 PF11146 Protein of unknown function (DUF2905) TOPB45_RS02690 PF00919 Uncharacterized protein family UPF0004 TOPB45_RS02690 PF04055 Radical SAM superfamily TOPB45_RS02695 PF01066 CDP-alcohol phosphatidyltransferase TOPB45_RS02700 PF02677 Epoxyqueuosine reductase QueH TOPB45_RS02730 PF01475 Ferric uptake regulator family TOPB45_RS02745 PF12849 PBP superfamily domain TOPB45_RS02750 PF00528 Binding-protein-dependent transport system inner membrane component TOPB45_RS02755 PF00528 Binding-protein-dependent transport system inner membrane component TOPB45_RS02760 PF00005 ABC transporter TOPB45_RS02765 PF01960 ArgJ family TOPB45_RS02770 PF01975 Survival protein SurE TOPB45_RS02780 PF01687 Riboflavin kinase TOPB45_RS02780 PF06574 FAD synthetase TOPB45_RS02785 PF00117 Glutamine amidotransferase class-I TOPB45_RS02785 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TOPB45_RS02800 PF00258 Flavodoxin TOPB45_RS02800 PF00753 Metallo-beta-lactamase superfamily TOPB45_RS02810 PF00301 Rubredoxin TOPB45_RS02815 PF00301 Rubredoxin TOPB45_RS02820 PF00301 Rubredoxin TOPB45_RS02825 PF01880 Desulfoferrodoxin TOPB45_RS02825 PF06397 Desulfoferrodoxin, N-terminal domain TOPB45_RS02835 PF00216 Bacterial DNA-binding protein TOPB45_RS02840 PF03484 tRNA synthetase B5 domain TOPB45_RS02840 PF03483 B3/4 domain TOPB45_RS02840 PF01588 Putative tRNA binding domain TOPB45_RS02840 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TOPB45_RS02840 PF03147 Ferredoxin-fold anticodon binding domain TOPB45_RS02845 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TOPB45_RS02845 PF01409 tRNA synthetases class II core domain (F) TOPB45_RS02850 PF00453 Ribosomal protein L20 TOPB45_RS02855 PF01632 Ribosomal protein L35 TOPB45_RS02860 PF02548 Ketopantoate hydroxymethyltransferase TOPB45_RS02865 PF17864 RuvB AAA lid domain TOPB45_RS02865 PF05491 RuvB C-terminal winged helix domain TOPB45_RS02865 PF05496 Holliday junction DNA helicase RuvB P-loop domain TOPB45_RS02870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TOPB45_RS02870 PF12729 Four helix bundle sensory module for signal transduction TOPB45_RS02870 PF00672 HAMP domain TOPB45_RS02895 PF01926 50S ribosome-binding GTPase TOPB45_RS02905 PF00578 AhpC/TSA family TOPB45_RS02905 PF10417 C-terminal domain of 1-Cys peroxiredoxin TOPB45_RS02915 PF00294 pfkB family carbohydrate kinase TOPB45_RS02920 PF01523 Putative modulator of DNA gyrase TOPB45_RS02925 PF00156 Phosphoribosyl transferase domain TOPB45_RS02930 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TOPB45_RS02940 PF03129 Anticodon binding domain TOPB45_RS02940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TOPB45_RS02940 PF04073 Aminoacyl-tRNA editing domain TOPB45_RS02945 PF00132 Bacterial transferase hexapeptide (six repeats) TOPB45_RS02945 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD TOPB45_RS02960 PF00350 Dynamin family TOPB45_RS02970 PF01814 Hemerythrin HHE cation binding domain TOPB45_RS03000 PF07690 Major Facilitator Superfamily TOPB45_RS03010 PF01330 RuvA N terminal domain TOPB45_RS03010 PF07499 RuvA, C-terminal domain TOPB45_RS03015 PF02075 Crossover junction endodeoxyribonuclease RuvC TOPB45_RS03020 PF01709 Transcriptional regulator TOPB45_RS03035 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TOPB45_RS03035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TOPB45_RS03055 PF08029 HisG, C-terminal domain TOPB45_RS03055 PF01634 ATP phosphoribosyltransferase TOPB45_RS03060 PF01502 Phosphoribosyl-AMP cyclohydrolase TOPB45_RS03065 PF00218 Indole-3-glycerol phosphate synthase TOPB45_RS03070 PF00468 Ribosomal protein L34 TOPB45_RS03075 PF00825 Ribonuclease P TOPB45_RS03080 PF01809 Putative membrane protein insertion efficiency factor TOPB45_RS03085 PF02096 60Kd inner membrane protein TOPB45_RS03085 PF14849 YidC periplasmic domain TOPB45_RS03095 PF10396 GTP-binding protein TrmE N-terminus TOPB45_RS03095 PF12631 MnmE helical domain TOPB45_RS03095 PF01926 50S ribosome-binding GTPase TOPB45_RS03100 PF05378 Hydantoinase/oxoprolinase N-terminal region TOPB45_RS03100 PF01968 Hydantoinase/oxoprolinase TOPB45_RS03110 PF08543 Phosphomethylpyrimidine kinase TOPB45_RS03115 PF02686 Glu-tRNAGln amidotransferase C subunit TOPB45_RS03120 PF01425 Amidase TOPB45_RS03125 PF17762 HTH domain found in ParB protein TOPB45_RS03125 PF02195 ParB-like nuclease domain TOPB45_RS03130 PF00862 Sucrose synthase TOPB45_RS03130 PF00534 Glycosyl transferases group 1 TOPB45_RS03145 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TOPB45_RS03145 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TOPB45_RS03150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TOPB45_RS03160 PF02834 LigT like Phosphoesterase TOPB45_RS03165 PF02464 Competence-damaged protein TOPB45_RS03165 PF18146 Damage-inducible protein CinA KH domain TOPB45_RS03165 PF00994 Probable molybdopterin binding domain TOPB45_RS03170 PF04608 Phosphatidylglycerophosphatase A TOPB45_RS03180 PF01370 NAD dependent epimerase/dehydratase family TOPB45_RS03180 PF08338 Domain of unknown function (DUF1731) TOPB45_RS03185 PF02254 TrkA-N domain TOPB45_RS03185 PF07885 Ion channel TOPB45_RS03190 PF00582 Universal stress protein family TOPB45_RS03195 PF03600 Citrate transporter TOPB45_RS03200 PF00535 Glycosyl transferase family 2 TOPB45_RS03205 PF00271 Helicase conserved C-terminal domain TOPB45_RS03205 PF00270 DEAD/DEAH box helicase TOPB45_RS03205 PF17191 RecG wedge domain TOPB45_RS03215 PF01790 Prolipoprotein diacylglyceryl transferase TOPB45_RS03220 PF00730 HhH-GPD superfamily base excision DNA repair protein TOPB45_RS03220 PF00633 Helix-hairpin-helix motif TOPB45_RS03230 PF01411 tRNA synthetases class II (A) TOPB45_RS03230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TOPB45_RS03230 PF02272 DHHA1 domain TOPB45_RS03235 PF02773 S-adenosylmethionine synthetase, C-terminal domain TOPB45_RS03235 PF00438 S-adenosylmethionine synthetase, N-terminal domain TOPB45_RS03235 PF02772 S-adenosylmethionine synthetase, central domain TOPB45_RS03240 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TOPB45_RS03240 PF05221 S-adenosyl-L-homocysteine hydrolase TOPB45_RS03245 PF00677 Lumazine binding domain TOPB45_RS03255 PF14748 Pyrroline-5-carboxylate reductase dimerisation TOPB45_RS03255 PF03807 NADP oxidoreductase coenzyme F420-dependent TOPB45_RS03260 PF01384 Phosphate transporter family TOPB45_RS03275 PF00459 Inositol monophosphatase family TOPB45_RS03285 PF00072 Response regulator receiver domain TOPB45_RS03285 PF00990 Diguanylate cyclase, GGDEF domain TOPB45_RS03290 PF00575 S1 RNA binding domain TOPB45_RS03290 PF00773 RNB domain TOPB45_RS03295 PF00977 Histidine biosynthesis protein TOPB45_RS03305 PF13380 CoA binding domain TOPB45_RS03305 PF13607 Succinyl-CoA ligase like flavodoxin domain TOPB45_RS03315 PF01979 Amidohydrolase family TOPB45_RS03320 PF00501 AMP-binding enzyme TOPB45_RS03320 PF13193 AMP-binding enzyme C-terminal domain TOPB45_RS03320 PF16177 Acetyl-coenzyme A synthetase N-terminus TOPB45_RS03325 PF00465 Iron-containing alcohol dehydrogenase TOPB45_RS03330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TOPB45_RS03330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TOPB45_RS03335 PF01872 RibD C-terminal domain TOPB45_RS03350 PF00440 Bacterial regulatory proteins, tetR family TOPB45_RS03370 PF00501 AMP-binding enzyme TOPB45_RS03370 PF14535 AMP-binding enzyme C-terminal domain TOPB45_RS03380 PF00501 AMP-binding enzyme TOPB45_RS03380 PF14535 AMP-binding enzyme C-terminal domain TOPB45_RS03390 PF02652 L-lactate permease TOPB45_RS03415 PF02618 YceG-like family TOPB45_RS03420 PF00398 Ribosomal RNA adenine dimethylase TOPB45_RS03425 PF04055 Radical SAM superfamily TOPB45_RS03425 PF00919 Uncharacterized protein family UPF0004 TOPB45_RS03425 PF18693 TRAM domain TOPB45_RS03430 PF00083 Sugar (and other) transporter TOPB45_RS03445 PF16363 GDP-mannose 4,6 dehydratase TOPB45_RS03455 PF00202 Aminotransferase class-III TOPB45_RS03460 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TOPB45_RS03460 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TOPB45_RS03470 PF00158 Sigma-54 interaction domain TOPB45_RS03470 PF02954 Bacterial regulatory protein, Fis family TOPB45_RS03470 PF00072 Response regulator receiver domain TOPB45_RS03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPB45_RS03475 PF00989 PAS fold TOPB45_RS03475 PF00512 His Kinase A (phospho-acceptor) domain TOPB45_RS03475 PF13426 PAS domain TOPB45_RS03475 PF13188 PAS domain TOPB45_RS03490 PF02580 D-Tyr-tRNA(Tyr) deacylase TOPB45_RS03510 PF00698 Acyl transferase domain TOPB45_RS03515 PF01597 Glycine cleavage H-protein TOPB45_RS03520 PF01312 FlhB HrpN YscU SpaS Family TOPB45_RS03525 PF01950 Fructose-1,6-bisphosphatase TOPB45_RS03535 PF02472 Biopolymer transport protein ExbD/TolR TOPB45_RS03545 PF00155 Aminotransferase class I and II TOPB45_RS03560 PF03548 Outer membrane lipoprotein carrier protein LolA TOPB45_RS03565 PF17854 FtsK alpha domain TOPB45_RS03565 PF09397 Ftsk gamma domain TOPB45_RS03565 PF13491 4TM region of DNA translocase FtsK/SpoIIIE TOPB45_RS03565 PF01580 FtsK/SpoIIIE family TOPB45_RS03575 PF03797 Autotransporter beta-domain TOPB45_RS03585 PF03129 Anticodon binding domain TOPB45_RS03585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TOPB45_RS03585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TOPB45_RS03590 PF05198 Translation initiation factor IF-3, N-terminal domain TOPB45_RS03590 PF00707 Translation initiation factor IF-3, C-terminal domain TOPB45_RS03595 PF00117 Glutamine amidotransferase class-I TOPB45_RS03605 PF04079 Segregation and condensation complex subunit ScpB TOPB45_RS03610 PF04055 Radical SAM superfamily TOPB45_RS03610 PF01926 50S ribosome-binding GTPase TOPB45_RS03610 PF01018 GTP1/OBG TOPB45_RS03620 PF00834 Ribulose-phosphate 3 epimerase family TOPB45_RS03630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TOPB45_RS03630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TOPB45_RS03635 PF02547 Queuosine biosynthesis protein TOPB45_RS03640 PF07690 Major Facilitator Superfamily TOPB45_RS03645 PF03372 Endonuclease/Exonuclease/phosphatase family TOPB45_RS03665 PF02978 Signal peptide binding domain TOPB45_RS03665 PF00448 SRP54-type protein, GTPase domain TOPB45_RS03665 PF02881 SRP54-type protein, helical bundle domain TOPB45_RS03670 PF00886 Ribosomal protein S16 TOPB45_RS03680 PF01782 RimM N-terminal domain TOPB45_RS03680 PF05239 PRC-barrel domain TOPB45_RS03685 PF01746 tRNA (Guanine-1)-methyltransferase TOPB45_RS03685 PF09936 SAM-dependent RNA methyltransferase TOPB45_RS03690 PF00403 Heavy-metal-associated domain TOPB45_RS03695 PF00403 Heavy-metal-associated domain TOPB45_RS03700 PF02785 Biotin carboxylase C-terminal domain TOPB45_RS03700 PF00289 Biotin carboxylase, N-terminal domain TOPB45_RS03700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TOPB45_RS03705 PF02785 Biotin carboxylase C-terminal domain TOPB45_RS03705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TOPB45_RS03705 PF00364 Biotin-requiring enzyme TOPB45_RS03705 PF02436 Conserved carboxylase domain TOPB45_RS03705 PF00289 Biotin carboxylase, N-terminal domain TOPB45_RS03705 PF00682 HMGL-like TOPB45_RS03715 PF00572 Ribosomal protein L13 TOPB45_RS03720 PF00380 Ribosomal protein S9/S16 TOPB45_RS03725 PF02774 Semialdehyde dehydrogenase, dimerisation domain TOPB45_RS03725 PF01118 Semialdehyde dehydrogenase, NAD binding domain TOPB45_RS03730 PF01416 tRNA pseudouridine synthase TOPB45_RS03735 PF00475 Imidazoleglycerol-phosphate dehydratase TOPB45_RS03745 PF01406 tRNA synthetases class I (C) catalytic domain TOPB45_RS03745 PF09190 DALR domain TOPB45_RS03750 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TOPB45_RS03755 PF00682 HMGL-like TOPB45_RS03755 PF08502 LeuA allosteric (dimerisation) domain TOPB45_RS03760 PF01842 ACT domain TOPB45_RS03760 PF13840 ACT domain TOPB45_RS03760 PF00696 Amino acid kinase family TOPB45_RS03780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TOPB45_RS03785 PF13520 Amino acid permease TOPB45_RS03810 PF00005 ABC transporter TOPB45_RS03820 PF01871 AMMECR1 TOPB45_RS03830 PF00881 Nitroreductase family TOPB45_RS03840 PF17284 Spermidine synthase tetramerisation domain TOPB45_RS03845 PF00226 DnaJ domain TOPB45_RS03845 PF01556 DnaJ C terminal domain TOPB45_RS03850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TOPB45_RS03855 PF00464 Serine hydroxymethyltransferase TOPB45_RS03860 PF00535 Glycosyl transferase family 2 TOPB45_RS03875 PF00164 Ribosomal protein S12/S23 TOPB45_RS03880 PF00177 Ribosomal protein S7p/S5e TOPB45_RS03885 PF00009 Elongation factor Tu GTP binding domain TOPB45_RS03885 PF03764 Elongation factor G, domain IV TOPB45_RS03885 PF14492 Elongation Factor G, domain II TOPB45_RS03885 PF00679 Elongation factor G C-terminus TOPB45_RS03885 PF03144 Elongation factor Tu domain 2 TOPB45_RS03890 PF03143 Elongation factor Tu C-terminal domain TOPB45_RS03890 PF00009 Elongation factor Tu GTP binding domain TOPB45_RS03890 PF03144 Elongation factor Tu domain 2 TOPB45_RS03895 PF00338 Ribosomal protein S10p/S20e TOPB45_RS03900 PF00297 Ribosomal protein L3 TOPB45_RS03905 PF00573 Ribosomal protein L4/L1 family TOPB45_RS03910 PF00276 Ribosomal protein L23 TOPB45_RS03915 PF00181 Ribosomal Proteins L2, RNA binding domain TOPB45_RS03915 PF03947 Ribosomal Proteins L2, C-terminal domain TOPB45_RS03920 PF00203 Ribosomal protein S19 TOPB45_RS03925 PF00237 Ribosomal protein L22p/L17e TOPB45_RS03930 PF00189 Ribosomal protein S3, C-terminal domain TOPB45_RS03930 PF07650 KH domain TOPB45_RS03935 PF00252 Ribosomal protein L16p/L10e TOPB45_RS03940 PF00831 Ribosomal L29 protein TOPB45_RS03945 PF00366 Ribosomal protein S17 TOPB45_RS03950 PF00238 Ribosomal protein L14p/L23e TOPB45_RS03955 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TOPB45_RS03955 PF00467 KOW motif TOPB45_RS03960 PF00281 Ribosomal protein L5 TOPB45_RS03960 PF00673 ribosomal L5P family C-terminus TOPB45_RS03965 PF00253 Ribosomal protein S14p/S29e TOPB45_RS03970 PF00410 Ribosomal protein S8 TOPB45_RS03975 PF00347 Ribosomal protein L6 TOPB45_RS03980 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TOPB45_RS03985 PF00333 Ribosomal protein S5, N-terminal domain TOPB45_RS03985 PF03719 Ribosomal protein S5, C-terminal domain TOPB45_RS03990 PF00327 Ribosomal protein L30p/L7e TOPB45_RS03995 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TOPB45_RS04000 PF00344 SecY translocase TOPB45_RS04005 PF05191 Adenylate kinase, active site lid TOPB45_RS04010 PF00557 Metallopeptidase family M24 TOPB45_RS04015 PF01176 Translation initiation factor 1A / IF-1 TOPB45_RS04020 PF00444 Ribosomal protein L36 TOPB45_RS04025 PF00416 Ribosomal protein S13/S18 TOPB45_RS04030 PF00411 Ribosomal protein S11 TOPB45_RS04035 PF01479 S4 domain TOPB45_RS04035 PF00163 Ribosomal protein S4/S9 N-terminal domain TOPB45_RS04040 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TOPB45_RS04040 PF01000 RNA polymerase Rpb3/RpoA insert domain TOPB45_RS04040 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TOPB45_RS04045 PF01196 Ribosomal protein L17 TOPB45_RS04050 PF01966 HD domain TOPB45_RS04050 PF01743 Poly A polymerase head domain TOPB45_RS04050 PF12627 Probable RNA and SrmB- binding site of polymerase A TOPB45_RS04055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TOPB45_RS04055 PF05698 Bacterial trigger factor protein (TF) C-terminus TOPB45_RS04055 PF05697 Bacterial trigger factor protein (TF) TOPB45_RS04060 PF00574 Clp protease TOPB45_RS04065 PF07724 AAA domain (Cdc48 subfamily) TOPB45_RS04065 PF06689 ClpX C4-type zinc finger TOPB45_RS04065 PF10431 C-terminal, D2-small domain, of ClpB protein TOPB45_RS04070 PF05362 Lon protease (S16) C-terminal proteolytic domain TOPB45_RS04070 PF00004 ATPase family associated with various cellular activities (AAA) TOPB45_RS04070 PF02190 ATP-dependent protease La (LON) substrate-binding domain TOPB45_RS04075 PF07497 Rho termination factor, RNA-binding domain TOPB45_RS04075 PF07498 Rho termination factor, N-terminal domain TOPB45_RS04075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TOPB45_RS04085 PF17805 AsnC-like ligand binding domain TOPB45_RS04090 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase TOPB45_RS04100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPB45_RS04100 PF00512 His Kinase A (phospho-acceptor) domain TOPB45_RS04100 PF00989 PAS fold TOPB45_RS04100 PF00672 HAMP domain TOPB45_RS04105 PF01367 5'-3' exonuclease, C-terminal SAM fold TOPB45_RS04105 PF00476 DNA polymerase family A TOPB45_RS04105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TOPB45_RS04110 PF01165 Ribosomal protein S21 TOPB45_RS04115 PF01713 Smr domain TOPB45_RS04115 PF00488 MutS domain V TOPB45_RS04125 PF04539 Sigma-70 region 3 TOPB45_RS04125 PF04542 Sigma-70 region 2 TOPB45_RS04125 PF03979 Sigma-70 factor, region 1.1 TOPB45_RS04125 PF00140 Sigma-70 factor, region 1.2 TOPB45_RS04125 PF04545 Sigma-70, region 4 TOPB45_RS04125 PF04546 Sigma-70, non-essential region TOPB45_RS04130 PF17805 AsnC-like ligand binding domain TOPB45_RS04135 PF01925 Sulfite exporter TauE/SafE TOPB45_RS04140 PF01435 Peptidase family M48 TOPB45_RS04225 PF13180 PDZ domain TOPB45_RS04225 PF17820 PDZ domain TOPB45_RS04250 PF13580 SIS domain TOPB45_RS04255 PF00814 Glycoprotease family TOPB45_RS04260 PF00158 Sigma-54 interaction domain TOPB45_RS04260 PF00072 Response regulator receiver domain TOPB45_RS04260 PF02954 Bacterial regulatory protein, Fis family TOPB45_RS04265 PF02632 BioY family TOPB45_RS04270 PF02675 S-adenosylmethionine decarboxylase TOPB45_RS04275 PF00491 Arginase family TOPB45_RS04295 PF00149 Calcineurin-like phosphoesterase TOPB45_RS04305 PF00589 Phage integrase family TOPB45_RS04305 PF02899 Phage integrase, N-terminal SAM-like domain TOPB45_RS04310 PF01743 Poly A polymerase head domain TOPB45_RS04315 PF00575 S1 RNA binding domain TOPB45_RS04320 PF01343 Peptidase family S49 TOPB45_RS04325 PF00216 Bacterial DNA-binding protein TOPB45_RS04330 PF00478 IMP dehydrogenase / GMP reductase domain TOPB45_RS04330 PF00571 CBS domain TOPB45_RS04335 PF00482 Type II secretion system (T2SS), protein F TOPB45_RS04345 PF02673 Bacitracin resistance protein BacA TOPB45_RS04355 PF17827 PrmC N-terminal domain TOPB45_RS04355 PF05175 Methyltransferase small domain TOPB45_RS04360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TOPB45_RS04390 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TOPB45_RS04390 PF01676 Metalloenzyme superfamily TOPB45_RS04395 PF01618 MotA/TolQ/ExbB proton channel family TOPB45_RS04400 PF02472 Biopolymer transport protein ExbD/TolR TOPB45_RS04425 PF00912 Transglycosylase TOPB45_RS04435 PF01068 ATP dependent DNA ligase domain TOPB45_RS04435 PF04679 ATP dependent DNA ligase C terminal region TOPB45_RS04435 PF04675 DNA ligase N terminus TOPB45_RS04485 PF17863 AAA lid domain TOPB45_RS04485 PF07726 ATPase family associated with various cellular activities (AAA) TOPB45_RS04500 PF17820 PDZ domain TOPB45_RS04500 PF02163 Peptidase family M50 TOPB45_RS04510 PF00588 SpoU rRNA Methylase family TOPB45_RS04515 PF05958 tRNA (Uracil-5-)-methyltransferase TOPB45_RS04520 PF01869 BadF/BadG/BcrA/BcrD ATPase family TOPB45_RS04535 PF00119 ATP synthase A chain TOPB45_RS04540 PF00137 ATP synthase subunit C TOPB45_RS04545 PF01078 Magnesium chelatase, subunit ChlI TOPB45_RS04545 PF13335 Magnesium chelatase, subunit ChlI C-terminal TOPB45_RS04550 PF00483 Nucleotidyl transferase TOPB45_RS04550 PF01066 CDP-alcohol phosphatidyltransferase TOPB45_RS04555 PF01455 HupF/HypC family TOPB45_RS04560 PF01924 Hydrogenase formation hypA family TOPB45_RS04565 PF00374 Nickel-dependent hydrogenase TOPB45_RS04570 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal TOPB45_RS04570 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TOPB45_RS04580 PF01022 Bacterial regulatory protein, arsR family TOPB45_RS04610 PF00512 His Kinase A (phospho-acceptor) domain TOPB45_RS04610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPB45_RS04610 PF00989 PAS fold TOPB45_RS04615 PF00072 Response regulator receiver domain TOPB45_RS04615 PF02954 Bacterial regulatory protein, Fis family TOPB45_RS04615 PF00158 Sigma-54 interaction domain TOPB45_RS04620 PF13247 4Fe-4S dicluster domain TOPB45_RS04620 PF12800 4Fe-4S binding domain TOPB45_RS04625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TOPB45_RS04625 PF01568 Molydopterin dinucleotide binding domain TOPB45_RS04625 PF00384 Molybdopterin oxidoreductase TOPB45_RS04650 PF08264 Anticodon-binding domain of tRNA TOPB45_RS04650 PF00133 tRNA synthetases class I (I, L, M and V) TOPB45_RS04650 PF06827 Zinc finger found in FPG and IleRS TOPB45_RS04655 PF01252 Signal peptidase (SPase) II TOPB45_RS04675 PF00180 Isocitrate/isopropylmalate dehydrogenase TOPB45_RS04680 PF01541 GIY-YIG catalytic domain TOPB45_RS04680 PF02151 UvrB/uvrC motif TOPB45_RS04680 PF08459 UvrC Helix-hairpin-helix N-terminal TOPB45_RS04685 PF00072 Response regulator receiver domain TOPB45_RS04685 PF00196 Bacterial regulatory proteins, luxR family TOPB45_RS04715 PF03783 Curli production assembly/transport component CsgG TOPB45_RS04725 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TOPB45_RS04725 PF00437 Type II/IV secretion system protein TOPB45_RS04730 PF00482 Type II secretion system (T2SS), protein F TOPB45_RS04735 PF01471 Putative peptidoglycan binding domain TOPB45_RS04735 PF13401 AAA domain TOPB45_RS04770 PF00114 Pilin (bacterial filament) TOPB45_RS04770 PF07963 Prokaryotic N-terminal methylation motif TOPB45_RS04775 PF02875 Mur ligase family, glutamate ligase domain TOPB45_RS04775 PF08245 Mur ligase middle domain TOPB45_RS04775 PF01225 Mur ligase family, catalytic domain TOPB45_RS04790 PF13476 AAA domain TOPB45_RS04795 PF00005 ABC transporter TOPB45_RS04795 PF08402 TOBE domain TOPB45_RS04800 PF00528 Binding-protein-dependent transport system inner membrane component TOPB45_RS04815 PF02381 MraZ protein, putative antitoxin-like TOPB45_RS04820 PF01795 MraW methylase family TOPB45_RS04835 PF08245 Mur ligase middle domain TOPB45_RS04835 PF02875 Mur ligase family, glutamate ligase domain TOPB45_RS04835 PF01225 Mur ligase family, catalytic domain TOPB45_RS04840 PF08245 Mur ligase middle domain TOPB45_RS04840 PF02875 Mur ligase family, glutamate ligase domain TOPB45_RS04840 PF01225 Mur ligase family, catalytic domain TOPB45_RS04845 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TOPB45_RS04845 PF00953 Glycosyl transferase family 4 TOPB45_RS04850 PF02875 Mur ligase family, glutamate ligase domain TOPB45_RS04850 PF08245 Mur ligase middle domain TOPB45_RS04855 PF03033 Glycosyltransferase family 28 N-terminal domain TOPB45_RS04855 PF04101 Glycosyltransferase family 28 C-terminal domain TOPB45_RS04860 PF08245 Mur ligase middle domain TOPB45_RS04860 PF02875 Mur ligase family, glutamate ligase domain TOPB45_RS04860 PF01225 Mur ligase family, catalytic domain TOPB45_RS04865 PF01565 FAD binding domain TOPB45_RS04865 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TOPB45_RS04875 PF02491 SHS2 domain inserted in FTSA TOPB45_RS04880 PF12327 FtsZ family, C-terminal domain TOPB45_RS04880 PF00091 Tubulin/FtsZ family, GTPase domain TOPB45_RS04895 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TOPB45_RS04915 PF01430 Hsp33 protein TOPB45_RS04920 PF01180 Dihydroorotate dehydrogenase TOPB45_RS04925 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TOPB45_RS04935 PF03023 Lipid II flippase MurJ TOPB45_RS04940 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TOPB45_RS04940 PF00925 GTP cyclohydrolase II TOPB45_RS04955 PF00535 Glycosyl transferase family 2 TOPB45_RS04995 PF00989 PAS fold TOPB45_RS04995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPB45_RS04995 PF00512 His Kinase A (phospho-acceptor) domain TOPB45_RS04995 PF13426 PAS domain TOPB45_RS04995 PF13188 PAS domain TOPB45_RS05000 PF00072 Response regulator receiver domain TOPB45_RS05000 PF02954 Bacterial regulatory protein, Fis family TOPB45_RS05000 PF00158 Sigma-54 interaction domain TOPB45_RS05015 PF04055 Radical SAM superfamily TOPB45_RS05015 PF00919 Uncharacterized protein family UPF0004 TOPB45_RS05015 PF01938 TRAM domain TOPB45_RS05020 PF02633 Creatinine amidohydrolase TOPB45_RS05025 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain TOPB45_RS05025 PF01137 RNA 3'-terminal phosphate cyclase TOPB45_RS05040 PF10414 Sirohaem synthase dimerisation region TOPB45_RS05040 PF14824 Sirohaem biosynthesis protein central TOPB45_RS05040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TOPB45_RS05045 PF00293 NUDIX domain TOPB45_RS05050 PF05362 Lon protease (S16) C-terminal proteolytic domain TOPB45_RS05050 PF00004 ATPase family associated with various cellular activities (AAA) TOPB45_RS05050 PF02190 ATP-dependent protease La (LON) substrate-binding domain TOPB45_RS05060 PF01245 Ribosomal protein L19 TOPB45_RS05065 PF01351 Ribonuclease HII TOPB45_RS05070 PF02021 Uncharacterised protein family UPF0102 TOPB45_RS05080 PF00317 Ribonucleotide reductase, all-alpha domain TOPB45_RS05080 PF03477 ATP cone domain TOPB45_RS05080 PF02867 Ribonucleotide reductase, barrel domain TOPB45_RS05085 PF03447 Homoserine dehydrogenase, NAD binding domain TOPB45_RS05085 PF01842 ACT domain TOPB45_RS05085 PF00742 Homoserine dehydrogenase TOPB45_RS05125 PF12169 DNA polymerase III subunits gamma and tau domain III TOPB45_RS05130 PF02575 YbaB/EbfC DNA-binding family TOPB45_RS05135 PF13662 Toprim domain TOPB45_RS05135 PF02132 RecR protein TOPB45_RS05145 PF02481 DNA recombination-mediator protein A TOPB45_RS05145 PF17782 DprA winged helix domain TOPB45_RS05150 PF07690 Major Facilitator Superfamily TOPB45_RS05155 PF02844 Phosphoribosylglycinamide synthetase, N domain TOPB45_RS05155 PF02843 Phosphoribosylglycinamide synthetase, C domain TOPB45_RS05155 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TOPB45_RS05160 PF00731 AIR carboxylase TOPB45_RS05165 PF01206 Sulfurtransferase TusA TOPB45_RS05165 PF00581 Rhodanese-like domain TOPB45_RS05175 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TOPB45_RS05195 PF02355 Protein export membrane protein TOPB45_RS05195 PF07549 SecD/SecF GG Motif TOPB45_RS05200 PF00551 Formyl transferase TOPB45_RS05200 PF02911 Formyl transferase, C-terminal domain TOPB45_RS05205 PF00004 ATPase family associated with various cellular activities (AAA) TOPB45_RS05205 PF07724 AAA domain (Cdc48 subfamily) TOPB45_RS05205 PF17871 AAA lid domain TOPB45_RS05205 PF02861 Clp amino terminal domain, pathogenicity island component TOPB45_RS05205 PF10431 C-terminal, D2-small domain, of ClpB protein TOPB45_RS05210 PF00011 Hsp20/alpha crystallin family TOPB45_RS05215 PF02769 AIR synthase related protein, C-terminal domain TOPB45_RS05215 PF00586 AIR synthase related protein, N-terminal domain TOPB45_RS05220 PF00334 Nucleoside diphosphate kinase TOPB45_RS05230 PF02163 Peptidase family M50 TOPB45_RS05235 PF13180 PDZ domain TOPB45_RS05235 PF03572 Peptidase family S41 TOPB45_RS05240 PF00318 Ribosomal protein S2 TOPB45_RS05245 PF00889 Elongation factor TS TOPB45_RS05250 PF00696 Amino acid kinase family TOPB45_RS05255 PF01765 Ribosome recycling factor TOPB45_RS05260 PF01255 Putative undecaprenyl diphosphate synthase TOPB45_RS05275 PF07478 D-ala D-ala ligase C-terminus TOPB45_RS05275 PF01820 D-ala D-ala ligase N-terminus TOPB45_RS05285 PF04972 BON domain TOPB45_RS05290 PF04055 Radical SAM superfamily TOPB45_RS05290 PF16199 Radical_SAM C-terminal domain TOPB45_RS05300 PF00690 Cation transporter/ATPase, N-terminus TOPB45_RS05300 PF00689 Cation transporting ATPase, C-terminus TOPB45_RS05310 PF01134 Glucose inhibited division protein A TOPB45_RS05310 PF13932 GidA associated domain TOPB45_RS05325 PF04539 Sigma-70 region 3 TOPB45_RS05325 PF03979 Sigma-70 factor, region 1.1 TOPB45_RS05325 PF04546 Sigma-70, non-essential region TOPB45_RS05325 PF04545 Sigma-70, region 4 TOPB45_RS05325 PF04542 Sigma-70 region 2 TOPB45_RS05325 PF00140 Sigma-70 factor, region 1.2 TOPB45_RS05330 PF00580 UvrD/REP helicase N-terminal domain TOPB45_RS05330 PF13361 UvrD-like helicase C-terminal domain TOPB45_RS05345 PF00696 Amino acid kinase family TOPB45_RS05350 PF08264 Anticodon-binding domain of tRNA TOPB45_RS05350 PF10458 Valyl tRNA synthetase tRNA binding arm TOPB45_RS05350 PF00133 tRNA synthetases class I (I, L, M and V) TOPB45_RS05360 PF02463 RecF/RecN/SMC N terminal domain TOPB45_RS05360 PF06470 SMC proteins Flexible Hinge Domain TOPB45_RS05375 PF02887 Pyruvate kinase, alpha/beta domain TOPB45_RS05375 PF00224 Pyruvate kinase, barrel domain TOPB45_RS05375 PF00391 PEP-utilising enzyme, mobile domain TOPB45_RS05390 PF01259 SAICAR synthetase TOPB45_RS05405 PF00271 Helicase conserved C-terminal domain TOPB45_RS05405 PF00176 SNF2 family N-terminal domain TOPB45_RS05485 PF01751 Toprim domain TOPB45_RS05485 PF01131 DNA topoisomerase TOPB45_RS05490 PF08245 Mur ligase middle domain TOPB45_RS05490 PF02875 Mur ligase family, glutamate ligase domain TOPB45_RS05510 PF12704 MacB-like periplasmic core domain TOPB45_RS05510 PF02687 FtsX-like permease family TOPB45_RS05510 PF00005 ABC transporter TOPB45_RS05515 PF00005 ABC transporter TOPB45_RS05515 PF12704 MacB-like periplasmic core domain TOPB45_RS05515 PF02687 FtsX-like permease family TOPB45_RS05520 PF02687 FtsX-like permease family TOPB45_RS05520 PF00005 ABC transporter TOPB45_RS05520 PF12704 MacB-like periplasmic core domain TOPB45_RS05525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TOPB45_RS05535 PF13520 Amino acid permease TOPB45_RS05540 PF01914 MarC family integral membrane protein TOPB45_RS05550 PF01509 TruB family pseudouridylate synthase (N terminal domain) TOPB45_RS05550 PF16198 tRNA pseudouridylate synthase B C-terminal domain TOPB45_RS05560 PF02033 Ribosome-binding factor A TOPB45_RS05570 PF11987 Translation-initiation factor 2 TOPB45_RS05570 PF04760 Translation initiation factor IF-2, N-terminal region TOPB45_RS05570 PF00009 Elongation factor Tu GTP binding domain TOPB45_RS05575 PF02348 Cytidylyltransferase TOPB45_RS05580 PF01875 Memo-like protein TOPB45_RS05585 PF00749 tRNA synthetases class I (E and Q), catalytic domain TOPB45_RS05595 PF00990 Diguanylate cyclase, GGDEF domain TOPB45_RS05595 PF08448 PAS fold TOPB45_RS05595 PF00563 EAL domain TOPB45_RS05725 PF02190 ATP-dependent protease La (LON) substrate-binding domain TOPB45_RS05725 PF00004 ATPase family associated with various cellular activities (AAA) TOPB45_RS05725 PF05362 Lon protease (S16) C-terminal proteolytic domain TOPB45_RS05730 PF18211 Csm1 subunit domain B TOPB45_RS05740 PF03787 RAMP superfamily TOPB45_RS05750 PF03787 RAMP superfamily TOPB45_RS05770 PF09827 CRISPR associated protein Cas2 TOPB45_RS05775 PF01867 CRISPR associated protein Cas1 TOPB45_RS05795 PF02656 Domain of unknown function (DUF202) TOPB45_RS05800 PF00849 RNA pseudouridylate synthase TOPB45_RS05800 PF01479 S4 domain TOPB45_RS05805 PF02705 K+ potassium transporter TOPB45_RS05810 PF00072 Response regulator receiver domain TOPB45_RS05810 PF00990 Diguanylate cyclase, GGDEF domain TOPB45_RS05825 PF01292 Prokaryotic cytochrome b561 TOPB45_RS05840 PF00579 tRNA synthetases class I (W and Y) TOPB45_RS05845 PF00533 BRCA1 C Terminus (BRCT) domain TOPB45_RS05845 PF01653 NAD-dependent DNA ligase adenylation domain TOPB45_RS05845 PF03120 NAD-dependent DNA ligase OB-fold domain TOPB45_RS05845 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TOPB45_RS05845 PF12826 Helix-hairpin-helix motif TOPB45_RS05850 PF05140 ResB-like family TOPB45_RS05860 PF00005 ABC transporter TOPB45_RS05870 PF00679 Elongation factor G C-terminus TOPB45_RS05870 PF03144 Elongation factor Tu domain 2 TOPB45_RS05870 PF00009 Elongation factor Tu GTP binding domain TOPB45_RS05870 PF06421 GTP-binding protein LepA C-terminus TOPB45_RS05875 PF10502 Signal peptidase, peptidase S26 TOPB45_RS05890 PF01171 PP-loop family TOPB45_RS05910 PF01479 S4 domain TOPB45_RS05910 PF00849 RNA pseudouridylate synthase TOPB45_RS05915 PF16916 Dimerisation domain of Zinc Transporter TOPB45_RS05915 PF01545 Cation efflux family TOPB45_RS05925 PF02390 Putative methyltransferase TOPB45_RS05925 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) TOPB45_RS05930 PF02578 Multi-copper polyphenol oxidoreductase laccase TOPB45_RS05935 PF01725 Ham1 family TOPB45_RS05940 PF03725 3' exoribonuclease family, domain 2 TOPB45_RS05940 PF01138 3' exoribonuclease family, domain 1 TOPB45_RS05950 PF02774 Semialdehyde dehydrogenase, dimerisation domain TOPB45_RS05950 PF01118 Semialdehyde dehydrogenase, NAD binding domain TOPB45_RS05955 PF08753 NikR C terminal nickel binding domain TOPB45_RS05955 PF01402 Ribbon-helix-helix protein, copG family TOPB45_RS05960 PF08206 Ribonuclease B OB domain TOPB45_RS05960 PF17876 Cold shock domain TOPB45_RS05960 PF00773 RNB domain TOPB45_RS05960 PF00575 S1 RNA binding domain TOPB45_RS05970 PF00155 Aminotransferase class I and II TOPB45_RS05975 PF01458 Uncharacterized protein family (UPF0051) TOPB45_RS05980 PF00005 ABC transporter TOPB45_RS05985 PF01555 DNA methylase TOPB45_RS05995 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TOPB45_RS05995 PF01138 3' exoribonuclease family, domain 1 TOPB45_RS05995 PF03725 3' exoribonuclease family, domain 2 TOPB45_RS05995 PF00575 S1 RNA binding domain TOPB45_RS05995 PF00013 KH domain TOPB45_RS06000 PF01048 Phosphorylase superfamily TOPB45_RS06005 PF00575 S1 RNA binding domain TOPB45_RS06005 PF10150 Ribonuclease E/G family TOPB45_RS06010 PF08645 Polynucleotide kinase 3 phosphatase TOPB45_RS06015 PF01075 Glycosyltransferase family 9 (heptosyltransferase) TOPB45_RS06020 PF00664 ABC transporter transmembrane region TOPB45_RS06020 PF00005 ABC transporter TOPB45_RS06025 PF01435 Peptidase family M48 TOPB45_RS06035 PF02666 Phosphatidylserine decarboxylase TOPB45_RS06040 PF01066 CDP-alcohol phosphatidyltransferase TOPB45_RS06045 PF04025 Domain of unknown function (DUF370) TOPB45_RS06050 PF00625 Guanylate kinase TOPB45_RS06055 PF08032 RNA 2'-O ribose methyltransferase substrate binding TOPB45_RS06055 PF00588 SpoU rRNA Methylase family TOPB45_RS06070 PF02577 Bifunctional nuclease TOPB45_RS06095 PF01966 HD domain TOPB45_RS06095 PF00072 Response regulator receiver domain TOPB45_RS06100 PF04023 FeoA domain TOPB45_RS06105 PF07670 Nucleoside recognition TOPB45_RS06105 PF04023 FeoA domain TOPB45_RS06105 PF02421 Ferrous iron transport protein B TOPB45_RS06105 PF07664 Ferrous iron transport protein B C terminus TOPB45_RS06105 PF17910 FeoB cytosolic helical domain TOPB45_RS06115 PF01230 HIT domain TOPB45_RS06120 PF00133 tRNA synthetases class I (I, L, M and V) TOPB45_RS06120 PF01588 Putative tRNA binding domain TOPB45_RS06120 PF09334 tRNA synthetases class I (M) TOPB45_RS06125 PF04468 PSP1 C-terminal conserved region TOPB45_RS06130 PF06463 Molybdenum Cofactor Synthesis C TOPB45_RS06130 PF04055 Radical SAM superfamily TOPB45_RS06140 PF03966 Trm112p-like protein TOPB45_RS06150 PF01132 Elongation factor P (EF-P) OB domain TOPB45_RS06150 PF09285 Elongation factor P, C-terminal TOPB45_RS06150 PF08207 Elongation factor P (EF-P) KOW-like domain TOPB45_RS06155 PF01861 Branched-chain polyamine synthase A C-terminal domain TOPB45_RS06165 PF11849 Domain of unknown function (DUF3369) TOPB45_RS06180 PF00563 EAL domain TOPB45_RS06180 PF03707 Bacterial signalling protein N terminal repeat TOPB45_RS06180 PF00990 Diguanylate cyclase, GGDEF domain TOPB45_RS06185 PF03477 ATP cone domain TOPB45_RS06190 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TOPB45_RS06220 PF13247 4Fe-4S dicluster domain TOPB45_RS06230 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TOPB45_RS06230 PF07685 CobB/CobQ-like glutamine amidotransferase domain TOPB45_RS06240 PF01467 Cytidylyltransferase-like TOPB45_RS06265 PF00263 Bacterial type II and III secretion system protein TOPB45_RS06265 PF03958 Bacterial type II/III secretion system short domain TOPB45_RS06265 PF07660 Secretin and TonB N terminus short domain TOPB45_RS06265 PF11741 AMIN domain TOPB45_RS06270 PF01134 Glucose inhibited division protein A TOPB45_RS06275 PF02699 Preprotein translocase subunit TOPB45_RS06280 PF01702 Queuine tRNA-ribosyltransferase TOPB45_RS06285 PF00155 Aminotransferase class I and II TOPB45_RS06300 PF00583 Acetyltransferase (GNAT) family TOPB45_RS06300 PF01047 MarR family TOPB45_RS06330 PF18395 Cas3 C-terminal domain TOPB45_RS06330 PF00270 DEAD/DEAH box helicase TOPB45_RS06330 PF18019 HD domain TOPB45_RS06340 PF01867 CRISPR associated protein Cas1 TOPB45_RS06345 PF09827 CRISPR associated protein Cas2 TOPB45_RS06365 PF00872 Transposase, Mutator family TOPB45_RS06380 PF02417 Chromate transporter TOPB45_RS06390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TOPB45_RS06390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TOPB45_RS06395 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TOPB45_RS06410 PF01206 Sulfurtransferase TusA TOPB45_RS06420 PF00582 Universal stress protein family TOPB45_RS06445 PF08448 PAS fold TOPB45_RS06445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPB45_RS06445 PF13188 PAS domain TOPB45_RS06445 PF00512 His Kinase A (phospho-acceptor) domain TOPB45_RS06445 PF00072 Response regulator receiver domain TOPB45_RS06450 PF00158 Sigma-54 interaction domain TOPB45_RS06450 PF00072 Response regulator receiver domain TOPB45_RS06450 PF02954 Bacterial regulatory protein, Fis family TOPB45_RS06455 PF01980 tRNA-methyltransferase O TOPB45_RS06465 PF00291 Pyridoxal-phosphate dependent enzyme TOPB45_RS06470 PF02535 ZIP Zinc transporter TOPB45_RS06485 PF01493 GXGXG motif TOPB45_RS06485 PF01645 Conserved region in glutamate synthase TOPB45_RS06485 PF04898 Glutamate synthase central domain TOPB45_RS06485 PF00310 Glutamine amidotransferases class-II TOPB45_RS06490 PF02540 NAD synthase TOPB45_RS06495 PF00120 Glutamine synthetase, catalytic domain TOPB45_RS06495 PF03951 Glutamine synthetase, beta-Grasp domain TOPB45_RS06500 PF00158 Sigma-54 interaction domain TOPB45_RS06500 PF01590 GAF domain TOPB45_RS06500 PF02954 Bacterial regulatory protein, Fis family TOPB45_RS06505 PF02540 NAD synthase TOPB45_RS06505 PF00117 Glutamine amidotransferase class-I TOPB45_RS06505 PF00958 GMP synthase C terminal domain TOPB45_RS06510 PF00543 Nitrogen regulatory protein P-II TOPB45_RS06520 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) TOPB45_RS06525 PF00501 AMP-binding enzyme TOPB45_RS06525 PF01553 Acyltransferase TOPB45_RS06540 PF10609 NUBPL iron-transfer P-loop NTPase TOPB45_RS06545 PF02562 PhoH-like protein TOPB45_RS06550 PF02325 YGGT family TOPB45_RS06555 PF02594 Uncharacterised ACR, YggU family COG1872 TOPB45_RS06560 PF01189 16S rRNA methyltransferase RsmB/F TOPB45_RS06560 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF TOPB45_RS06560 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF TOPB45_RS06565 PF00709 Adenylosuccinate synthetase TOPB45_RS06570 PF00289 Biotin carboxylase, N-terminal domain TOPB45_RS06570 PF02785 Biotin carboxylase C-terminal domain TOPB45_RS06570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TOPB45_RS06575 PF17848 Acetyl-coA carboxylase zinc finger domain TOPB45_RS06575 PF01039 Carboxyl transferase domain TOPB45_RS06585 PF03099 Biotin/lipoate A/B protein ligase family TOPB45_RS06585 PF02237 Biotin protein ligase C terminal domain TOPB45_RS06590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TOPB45_RS06590 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TOPB45_RS06590 PF02142 MGS-like domain TOPB45_RS06600 PF00005 ABC transporter TOPB45_RS06620 PF00586 AIR synthase related protein, N-terminal domain TOPB45_RS06620 PF02769 AIR synthase related protein, C-terminal domain TOPB45_RS06625 PF02091 Glycyl-tRNA synthetase alpha subunit TOPB45_RS06630 PF05746 DALR anticodon binding domain TOPB45_RS06630 PF02092 Glycyl-tRNA synthetase beta subunit TOPB45_RS06635 PF09107 Elongation factor SelB, winged helix TOPB45_RS06635 PF03144 Elongation factor Tu domain 2 TOPB45_RS06635 PF09105 Elongation factor SelB, winged helix TOPB45_RS06635 PF00009 Elongation factor Tu GTP binding domain TOPB45_RS06635 PF09106 Elongation factor SelB, winged helix TOPB45_RS06640 PF05362 Lon protease (S16) C-terminal proteolytic domain TOPB45_RS06640 PF13654 AAA domain TOPB45_RS06645 PF00330 Aconitase family (aconitate hydratase) TOPB45_RS06650 PF00694 Aconitase C-terminal domain TOPB45_RS06655 PF03819 MazG nucleotide pyrophosphohydrolase domain TOPB45_RS06660 PF00005 ABC transporter TOPB45_RS06665 PF00950 ABC 3 transport family TOPB45_RS06670 PF01026 TatD related DNase TOPB45_RS06675 PF00152 tRNA synthetases class II (D, K and N) TOPB45_RS06675 PF01336 OB-fold nucleic acid binding domain TOPB45_RS06675 PF02938 GAD domain TOPB45_RS06685 PF03167 Uracil DNA glycosylase superfamily TOPB45_RS06690 PF00766 Electron transfer flavoprotein FAD-binding domain TOPB45_RS06690 PF01012 Electron transfer flavoprotein domain TOPB45_RS06695 PF01012 Electron transfer flavoprotein domain TOPB45_RS06700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TOPB45_RS06700 PF02770 Acyl-CoA dehydrogenase, middle domain TOPB45_RS06700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TOPB45_RS06705 PF02801 Beta-ketoacyl synthase, C-terminal domain TOPB45_RS06705 PF00109 Beta-ketoacyl synthase, N-terminal domain TOPB45_RS06710 PF13193 AMP-binding enzyme C-terminal domain TOPB45_RS06710 PF00501 AMP-binding enzyme TOPB45_RS06725 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TOPB45_RS06725 PF02769 AIR synthase related protein, C-terminal domain TOPB45_RS06725 PF00586 AIR synthase related protein, N-terminal domain TOPB45_RS06730 PF00815 Histidinol dehydrogenase TOPB45_RS06735 PF00365 Phosphofructokinase TOPB45_RS06745 PF14489 QueF-like protein TOPB45_RS06750 PF00210 Ferritin-like domain TOPB45_RS06755 PF00005 ABC transporter TOPB45_RS06760 PF02361 Cobalt transport protein TOPB45_RS06770 PF01891 Cobalt uptake substrate-specific transmembrane region TOPB45_RS06800 PF00226 DnaJ domain TOPB45_RS06800 PF00684 DnaJ central domain TOPB45_RS06800 PF01556 DnaJ C terminal domain TOPB45_RS06805 PF03705 CheR methyltransferase, all-alpha domain TOPB45_RS06805 PF01739 CheR methyltransferase, SAM binding domain TOPB45_RS06810 PF01339 CheB methylesterase TOPB45_RS06810 PF00072 Response regulator receiver domain TOPB45_RS06815 PF00072 Response regulator receiver domain TOPB45_RS06835 PF00072 Response regulator receiver domain TOPB45_RS06840 PF04545 Sigma-70, region 4 TOPB45_RS06840 PF04539 Sigma-70 region 3 TOPB45_RS06840 PF04542 Sigma-70 region 2 TOPB45_RS06845 PF10609 NUBPL iron-transfer P-loop NTPase TOPB45_RS06850 PF00448 SRP54-type protein, GTPase domain TOPB45_RS06850 PF02881 SRP54-type protein, helical bundle domain TOPB45_RS06850 PF02978 Signal peptide binding domain TOPB45_RS06855 PF00771 FHIPEP family TOPB45_RS06860 PF01312 FlhB HrpN YscU SpaS Family TOPB45_RS06870 PF01313 Bacterial export proteins, family 3 TOPB45_RS06875 PF00813 FliP family TOPB45_RS06885 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TOPB45_RS06890 PF02154 Flagellar motor switch protein FliM TOPB45_RS06890 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TOPB45_RS06905 PF01661 Macro domain TOPB45_RS06935 PF00669 Bacterial flagellin N-terminal helical region TOPB45_RS06935 PF00700 Bacterial flagellin C-terminal helical region TOPB45_RS06955 PF04055 Radical SAM superfamily TOPB45_RS06960 PF04545 Sigma-70, region 4 TOPB45_RS06960 PF00140 Sigma-70 factor, region 1.2 TOPB45_RS06960 PF04542 Sigma-70 region 2 TOPB45_RS06975 PF00571 CBS domain TOPB45_RS06975 PF03471 Transporter associated domain TOPB45_RS06975 PF01595 Cyclin M transmembrane N-terminal domain TOPB45_RS06980 PF00571 CBS domain TOPB45_RS06980 PF03471 Transporter associated domain TOPB45_RS06980 PF01595 Cyclin M transmembrane N-terminal domain TOPB45_RS06995 PF00580 UvrD/REP helicase N-terminal domain TOPB45_RS06995 PF13361 UvrD-like helicase C-terminal domain TOPB45_RS07005 PF02559 CarD-like/TRCF domain TOPB45_RS07005 PF00271 Helicase conserved C-terminal domain TOPB45_RS07005 PF03461 TRCF domain TOPB45_RS07005 PF17757 UvrB interaction domain TOPB45_RS07005 PF00270 DEAD/DEAH box helicase TOPB45_RS07010 PF00829 Ribosomal prokaryotic L21 protein TOPB45_RS07015 PF01016 Ribosomal L27 protein TOPB45_RS07020 PF02660 Glycerol-3-phosphate acyltransferase TOPB45_RS07035 PF01171 PP-loop family TOPB45_RS07035 PF11734 TilS substrate C-terminal domain TOPB45_RS07040 PF00004 ATPase family associated with various cellular activities (AAA) TOPB45_RS07040 PF17862 AAA+ lid domain TOPB45_RS07040 PF06480 FtsH Extracellular TOPB45_RS07040 PF01434 Peptidase family M41 TOPB45_RS07045 PF00809 Pterin binding enzyme TOPB45_RS07050 PF02457 DisA bacterial checkpoint controller nucleotide-binding TOPB45_RS07060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TOPB45_RS07060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TOPB45_RS07060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TOPB45_RS07060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TOPB45_RS07070 PF17785 PUA-like domain TOPB45_RS07070 PF10672 S-adenosylmethionine-dependent methyltransferase TOPB45_RS07090 PF03749 Sugar fermentation stimulation protein RE domain TOPB45_RS07090 PF17746 SfsA N-terminal OB domain TOPB45_RS07095 PF08032 RNA 2'-O ribose methyltransferase substrate binding TOPB45_RS07095 PF00588 SpoU rRNA Methylase family TOPB45_RS07100 PF01926 50S ribosome-binding GTPase TOPB45_RS07100 PF13167 GTP-binding GTPase N-terminal TOPB45_RS07100 PF16360 GTP-binding GTPase Middle Region TOPB45_RS07115 PF01380 SIS domain TOPB45_RS07125 PF02224 Cytidylate kinase TOPB45_RS07130 PF01029 NusB family TOPB45_RS07135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TOPB45_RS07135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TOPB45_RS07140 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TOPB45_RS07140 PF00391 PEP-utilising enzyme, mobile domain TOPB45_RS07140 PF02896 PEP-utilising enzyme, TIM barrel domain TOPB45_RS07145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TOPB45_RS07145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TOPB45_RS07150 PF00583 Acetyltransferase (GNAT) family TOPB45_RS07155 PF03668 P-loop ATPase protein family TOPB45_RS07165 PF00309 Sigma-54 factor, Activator interacting domain (AID) TOPB45_RS07165 PF04963 Sigma-54 factor, core binding domain TOPB45_RS07165 PF04552 Sigma-54, DNA binding domain TOPB45_RS07170 PF12399 Branched-chain amino acid ATP-binding cassette transporter TOPB45_RS07170 PF00005 ABC transporter TOPB45_RS07180 PF00118 TCP-1/cpn60 chaperonin family TOPB45_RS07185 PF00166 Chaperonin 10 Kd subunit TOPB45_RS07195 PF01145 SPFH domain / Band 7 family TOPB45_RS07195 PF16200 C-terminal region of band_7 TOPB45_RS07205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TOPB45_RS07205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TOPB45_RS07205 PF00205 Thiamine pyrophosphate enzyme, central domain TOPB45_RS07210 PF10369 Small subunit of acetolactate synthase TOPB45_RS07210 PF01842 ACT domain TOPB45_RS07215 PF00456 Transketolase, thiamine diphosphate binding domain TOPB45_RS07220 PF00902 Sec-independent protein translocase protein (TatC) TOPB45_RS07225 PF02416 mttA/Hcf106 family TOPB45_RS07230 PF00483 Nucleotidyl transferase TOPB45_RS07240 PF08679 Dissimilatory sulfite reductase D (DsrD) TOPB45_RS07245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TOPB45_RS07245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TOPB45_RS07250 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TOPB45_RS07250 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TOPB45_RS07255 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TOPB45_RS07255 PF00437 Type II/IV secretion system protein TOPB45_RS07260 PF02634 FdhD/NarQ family TOPB45_RS07265 PF00753 Metallo-beta-lactamase superfamily TOPB45_RS07265 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TOPB45_RS07265 PF10996 Beta-Casp domain TOPB45_RS07275 PF00830 Ribosomal L28 family TOPB45_RS07280 PF13291 ACT domain TOPB45_RS07280 PF04607 Region found in RelA / SpoT proteins TOPB45_RS07280 PF02824 TGS domain TOPB45_RS07285 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TOPB45_RS07285 PF02779 Transketolase, pyrimidine binding domain TOPB45_RS07285 PF02780 Transketolase, C-terminal domain TOPB45_RS07290 PF00348 Polyprenyl synthetase TOPB45_RS07295 PF02609 Exonuclease VII small subunit TOPB45_RS07300 PF13742 OB-fold nucleic acid binding domain TOPB45_RS07300 PF02601 Exonuclease VII, large subunit TOPB45_RS07325 PF01883 Iron-sulfur cluster assembly protein TOPB45_RS07325 PF10609 NUBPL iron-transfer P-loop NTPase TOPB45_RS07345 PF02082 Transcriptional regulator TOPB45_RS07350 PF02322 Cytochrome bd terminal oxidase subunit II TOPB45_RS07355 PF01654 Cytochrome bd terminal oxidase subunit I TOPB45_RS07370 PF08745 PINc domain ribonuclease TOPB45_RS07380 PF09334 tRNA synthetases class I (M) TOPB45_RS07380 PF00133 tRNA synthetases class I (I, L, M and V) TOPB45_RS07380 PF13603 Leucyl-tRNA synthetase, Domain 2 TOPB45_RS07380 PF08264 Anticodon-binding domain of tRNA TOPB45_RS07385 PF00180 Isocitrate/isopropylmalate dehydrogenase TOPB45_RS07390 PF03167 Uracil DNA glycosylase superfamily TOPB45_RS07395 PF01972 Serine dehydrogenase proteinase TOPB45_RS07395 PF01957 NfeD-like C-terminal, partner-binding TOPB45_RS07405 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ TOPB45_RS07415 PF02127 Aminopeptidase I zinc metalloprotease (M18) TOPB45_RS07430 PF01649 Ribosomal protein S20 TOPB45_RS07435 PF00679 Elongation factor G C-terminus TOPB45_RS07435 PF14492 Elongation Factor G, domain II TOPB45_RS07435 PF03144 Elongation factor Tu domain 2 TOPB45_RS07435 PF00009 Elongation factor Tu GTP binding domain TOPB45_RS07435 PF03764 Elongation factor G, domain IV TOPB45_RS07440 PF00994 Probable molybdopterin binding domain TOPB45_RS07450 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TOPB45_RS07455 PF01869 BadF/BadG/BcrA/BcrD ATPase family TOPB45_RS07460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TOPB45_RS07460 PF03466 LysR substrate binding domain TOPB45_RS07465 PF01568 Molydopterin dinucleotide binding domain TOPB45_RS07465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TOPB45_RS07465 PF00384 Molybdopterin oxidoreductase TOPB45_RS07470 PF13247 4Fe-4S dicluster domain TOPB45_RS07480 PF02606 Tetraacyldisaccharide-1-P 4'-kinase TOPB45_RS07490 PF01230 HIT domain TOPB45_RS07495 PF00579 tRNA synthetases class I (W and Y) TOPB45_RS07495 PF01479 S4 domain TOPB45_RS07500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TOPB45_RS07500 PF02602 Uroporphyrinogen-III synthase HemD TOPB45_RS07505 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TOPB45_RS07505 PF03900 Porphobilinogen deaminase, C-terminal domain TOPB45_RS07515 PF02754 Cysteine-rich domain TOPB45_RS07520 PF01370 NAD dependent epimerase/dehydratase family TOPB45_RS07525 PF03741 Integral membrane protein TerC family TOPB45_RS07525 PF00571 CBS domain TOPB45_RS07525 PF03471 Transporter associated domain TOPB45_RS07530 PF00795 Carbon-nitrogen hydrolase TOPB45_RS07535 PF02441 Flavoprotein TOPB45_RS07560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TOPB45_RS07560 PF00672 HAMP domain TOPB45_RS07565 PF01584 CheW-like domain TOPB45_RS07570 PF01584 CheW-like domain TOPB45_RS07570 PF02895 Signal transducing histidine kinase, homodimeric domain TOPB45_RS07570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPB45_RS07570 PF01627 Hpt domain TOPB45_RS07570 PF00072 Response regulator receiver domain TOPB45_RS07575 PF02016 LD-carboxypeptidase N-terminal domain TOPB45_RS07575 PF17676 LD-carboxypeptidase C-terminal domain TOPB45_RS07580 PF03309 Type III pantothenate kinase TOPB45_RS07605 PF00800 Prephenate dehydratase TOPB45_RS07605 PF01842 ACT domain TOPB45_RS07605 PF01817 Chorismate mutase type II TOPB45_RS07615 PF13184 NusA-like KH domain TOPB45_RS07615 PF08529 NusA N-terminal domain TOPB45_RS07615 PF00575 S1 RNA binding domain TOPB45_RS07620 PF17384 RimP C-terminal SH3 domain TOPB45_RS07620 PF02576 RimP N-terminal domain TOPB45_RS07625 PF00083 Sugar (and other) transporter TOPB45_RS07630 PF00690 Cation transporter/ATPase, N-terminus TOPB45_RS07630 PF00689 Cation transporting ATPase, C-terminus TOPB45_RS07635 PF02554 Carbon starvation protein CstA TOPB45_RS07635 PF13722 5TM C-terminal transporter carbon starvation CstA TOPB45_RS07650 PF02768 DNA polymerase III beta subunit, C-terminal domain TOPB45_RS07650 PF02767 DNA polymerase III beta subunit, central domain TOPB45_RS07650 PF00712 DNA polymerase III beta subunit, N-terminal domain TOPB45_RS07655 PF00204 DNA gyrase B TOPB45_RS07655 PF00986 DNA gyrase B subunit, carboxyl terminus TOPB45_RS07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPB45_RS07655 PF01751 Toprim domain TOPB45_RS07660 PF00156 Phosphoribosyl transferase domain TOPB45_RS07665 PF03916 Polysulphide reductase, NrfD TOPB45_RS07670 PF13247 4Fe-4S dicluster domain TOPB45_RS07675 PF02085 Class III cytochrome C family TOPB45_RS07695 PF17760 UvrA interaction domain TOPB45_RS07695 PF17755 UvrA DNA-binding domain TOPB45_RS07695 PF00005 ABC transporter TOPB45_RS07700 PF14716 Helix-hairpin-helix domain TOPB45_RS07700 PF02811 PHP domain TOPB45_RS07700 PF14791 DNA polymerase beta thumb TOPB45_RS07705 PF07943 Penicillin-binding protein 5, C-terminal domain TOPB45_RS07705 PF00768 D-alanyl-D-alanine carboxypeptidase TOPB45_RS07710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TOPB45_RS07710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TOPB45_RS07710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TOPB45_RS07715 PF00753 Metallo-beta-lactamase superfamily TOPB45_RS07720 PF01202 Shikimate kinase TOPB45_RS07725 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TOPB45_RS07730 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TOPB45_RS07730 PF01488 Shikimate / quinate 5-dehydrogenase TOPB45_RS07730 PF08501 Shikimate dehydrogenase substrate binding domain TOPB45_RS07735 PF01487 Type I 3-dehydroquinase TOPB45_RS07740 PF02142 MGS-like domain TOPB45_RS07740 PF01808 AICARFT/IMPCHase bienzyme TOPB45_RS07745 PF04055 Radical SAM superfamily TOPB45_RS07745 PF13186 Iron-sulfur cluster-binding domain TOPB45_RS07750 PF00486 Transcriptional regulatory protein, C terminal TOPB45_RS07750 PF00072 Response regulator receiver domain TOPB45_RS07755 PF06689 ClpX C4-type zinc finger TOPB45_RS07755 PF07724 AAA domain (Cdc48 subfamily) TOPB45_RS07755 PF10431 C-terminal, D2-small domain, of ClpB protein TOPB45_RS07760 PF04851 Type III restriction enzyme, res subunit TOPB45_RS07760 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TOPB45_RS07760 PF18074 Primosomal protein N C-terminal domain TOPB45_RS07760 PF00271 Helicase conserved C-terminal domain TOPB45_RS07760 PF17764 3′ DNA-binding domain (3′BD) TOPB45_RS07765 PF00483 Nucleotidyl transferase TOPB45_RS07775 PF00437 Type II/IV secretion system protein TOPB45_RS07780 PF00437 Type II/IV secretion system protein TOPB45_RS07800 PF02934 GatB/GatE catalytic domain TOPB45_RS07800 PF02637 GatB domain TOPB45_RS07805 PF01008 Initiation factor 2 subunit family TOPB45_RS07810 PF02629 CoA binding domain TOPB45_RS07810 PF06971 Putative DNA-binding protein N-terminus TOPB45_RS07815 PF00692 dUTPase TOPB45_RS07825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TOPB45_RS07825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TOPB45_RS07845 PF04358 DsrC like protein TOPB45_RS07850 PF14698 Argininosuccinate lyase C-terminal TOPB45_RS07850 PF00583 Acetyltransferase (GNAT) family TOPB45_RS07850 PF00206 Lyase TOPB45_RS07860 PF03485 Arginyl tRNA synthetase N terminal domain TOPB45_RS07860 PF05746 DALR anticodon binding domain TOPB45_RS07860 PF00750 tRNA synthetases class I (R) TOPB45_RS07870 PF00849 RNA pseudouridylate synthase TOPB45_RS07870 PF01479 S4 domain TOPB45_RS07880 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TOPB45_RS07885 PF00012 Hsp70 protein TOPB45_RS07890 PF01025 GrpE TOPB45_RS07895 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TOPB45_RS07895 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TOPB45_RS07900 PF01368 DHH family TOPB45_RS07900 PF02833 DHHA2 domain TOPB45_RS07910 PF01618 MotA/TolQ/ExbB proton channel family TOPB45_RS07915 PF13677 Membrane MotB of proton-channel complex MotA/MotB TOPB45_RS07915 PF00691 OmpA family TOPB45_RS07920 PF01926 50S ribosome-binding GTPase TOPB45_RS07920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TOPB45_RS07935 PF01168 Alanine racemase, N-terminal domain TOPB45_RS07945 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TOPB45_RS07945 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TOPB45_RS07950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TOPB45_RS07950 PF02874 ATP synthase alpha/beta family, beta-barrel domain TOPB45_RS07955 PF00231 ATP synthase TOPB45_RS07960 PF00306 ATP synthase alpha/beta chain, C terminal domain TOPB45_RS07960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TOPB45_RS07960 PF02874 ATP synthase alpha/beta family, beta-barrel domain TOPB45_RS07965 PF00213 ATP synthase delta (OSCP) subunit TOPB45_RS07980 PF01098 Cell cycle protein TOPB45_RS07985 PF03717 Penicillin-binding Protein dimerisation domain TOPB45_RS07985 PF00905 Penicillin binding protein transpeptidase domain TOPB45_RS08000 PF00291 Pyridoxal-phosphate dependent enzyme TOPB45_RS08000 PF14821 Threonine synthase N terminus TOPB45_RS08010 PF12706 Beta-lactamase superfamily domain TOPB45_RS08020 PF03841 L-seryl-tRNA selenium transferase TOPB45_RS08020 PF12390 Selenocysteine synthase N terminal TOPB45_RS08025 PF00155 Aminotransferase class I and II TOPB45_RS08030 PF00682 HMGL-like TOPB45_RS08045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TOPB45_RS08045 PF07196 Flagellin hook IN motif TOPB45_RS08060 PF02119 Flagellar P-ring protein TOPB45_RS08065 PF02107 Flagellar L-ring protein TOPB45_RS08075 PF00460 Flagella basal body rod protein TOPB45_RS08075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TOPB45_RS08080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TOPB45_RS08080 PF00460 Flagella basal body rod protein TOPB45_RS08085 PF01103 Surface antigen TOPB45_RS08085 PF07244 Surface antigen variable number repeat TOPB45_RS08090 PF00005 ABC transporter TOPB45_RS08100 PF00152 tRNA synthetases class II (D, K and N) TOPB45_RS08100 PF01336 OB-fold nucleic acid binding domain TOPB45_RS08105 PF00589 Phage integrase family TOPB45_RS08105 PF02899 Phage integrase, N-terminal SAM-like domain TOPB45_RS08110 PF00072 Response regulator receiver domain TOPB45_RS08110 PF08448 PAS fold TOPB45_RS08110 PF13188 PAS domain TOPB45_RS08110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TOPB45_RS08110 PF00512 His Kinase A (phospho-acceptor) domain TOPB45_RS08120 PF00313 'Cold-shock' DNA-binding domain TOPB45_RS08130 PF14010 Phosphoenolpyruvate carboxylase TOPB45_RS08135 PF01264 Chorismate synthase TOPB45_RS08140 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TOPB45_RS08150 PF00330 Aconitase family (aconitate hydratase) TOPB45_RS08165 PF00117 Glutamine amidotransferase class-I TOPB45_RS08165 PF06418 CTP synthase N-terminus TOPB45_RS08175 PF02445 Quinolinate synthetase A protein TOPB45_RS08190 PF01966 HD domain TOPB45_RS08190 PF00013 KH domain TOPB45_RS08190 PF12072 Domain of unknown function (DUF3552) TOPB45_RS08195 PF13277 YmdB-like protein TOPB45_RS08200 PF01327 Polypeptide deformylase TOPB45_RS08210 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TOPB45_RS08215 PF00037 4Fe-4S binding domain TOPB45_RS08220 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TOPB45_RS08220 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TOPB45_RS08225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TOPB45_RS08255 PF06508 Queuosine biosynthesis protein QueC TOPB45_RS08265 PF01475 Ferric uptake regulator family TOPB45_RS08275 PF01784 NIF3 (NGG1p interacting factor 3) TOPB45_RS08285 PF01300 Telomere recombination TOPB45_RS08290 PF07992 Pyridine nucleotide-disulphide oxidoreductase TOPB45_RS08300 PF00890 FAD binding domain TOPB45_RS08300 PF02910 Fumarate reductase flavoprotein C-term TOPB45_RS08305 PF01676 Metalloenzyme superfamily TOPB45_RS08305 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TOPB45_RS08310 PF00902 Sec-independent protein translocase protein (TatC) TOPB45_RS08315 PF02416 mttA/Hcf106 family TOPB45_RS08320 PF01168 Alanine racemase, N-terminal domain TOPB45_RS08320 PF00842 Alanine racemase, C-terminal domain TOPB45_RS08325 PF07992 Pyridine nucleotide-disulphide oxidoreductase TOPB45_RS08330 PF03884 DNA gyrase inhibitor YacG TOPB45_RS08340 PF14698 Argininosuccinate lyase C-terminal TOPB45_RS08340 PF00206 Lyase TOPB45_RS08365 PF02082 Transcriptional regulator TOPB45_RS08370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TOPB45_RS08370 PF02403 Seryl-tRNA synthetase N-terminal domain TOPB45_RS08375 PF00565 Staphylococcal nuclease homologue TOPB45_RS08385 PF02561 Flagellar protein FliS TOPB45_RS08400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TOPB45_RS08400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TOPB45_RS08410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TOPB45_RS08410 PF00005 ABC transporter TOPB45_RS08415 PF00005 ABC transporter TOPB45_RS08415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TOPB45_RS08445 PF07559 Flagellar basal body protein FlaE TOPB45_RS08445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TOPB45_RS08445 PF00460 Flagella basal body rod protein TOPB45_RS08450 PF00690 Cation transporter/ATPase, N-terminus TOPB45_RS08450 PF00689 Cation transporting ATPase, C-terminus TOPB45_RS08455 PF00690 Cation transporter/ATPase, N-terminus TOPB45_RS08455 PF00689 Cation transporting ATPase, C-terminus TOPB45_RS08460 PF02223 Thymidylate kinase TOPB45_RS08485 PF00990 Diguanylate cyclase, GGDEF domain TOPB45_RS08485 PF00072 Response regulator receiver domain TOPB45_RS08500 PF00990 Diguanylate cyclase, GGDEF domain TOPB45_RS08505 PF11741 AMIN domain TOPB45_RS08505 PF01520 N-acetylmuramoyl-L-alanine amidase TOPB45_RS08515 PF00990 Diguanylate cyclase, GGDEF domain TOPB45_RS08520 PF02401 LytB protein TOPB45_RS08530 PF00156 Phosphoribosyl transferase domain TOPB45_RS08540 PF01569 PAP2 superfamily TOPB45_RS08545 PF01066 CDP-alcohol phosphatidyltransferase TOPB45_RS08555 PF01807 CHC2 zinc finger TOPB45_RS08555 PF08275 DNA primase catalytic core, N-terminal domain TOPB45_RS08555 PF10410 DnaB-helicase binding domain of primase TOPB45_RS08565 PF02698 DUF218 domain TOPB45_RS08570 PF09115 DNA polymerase III, delta subunit, C terminal TOPB45_RS08590 PF04715 Anthranilate synthase component I, N terminal region TOPB45_RS08590 PF00425 chorismate binding enzyme TOPB45_RS08595 PF04715 Anthranilate synthase component I, N terminal region TOPB45_RS08595 PF00425 chorismate binding enzyme TOPB45_RS08625 PF01895 PhoU domain TOPB45_RS08630 PF00990 Diguanylate cyclase, GGDEF domain TOPB45_RS08645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TOPB45_RS08655 PF00075 RNase H TOPB45_RS08670 PF02754 Cysteine-rich domain TOPB45_RS08685 PF10531 SLBB domain TOPB45_RS08695 PF04085 rod shape-determining protein MreC