locus-tag class description THEYE_A0001 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THEYE_A0001 PF07685 CobB/CobQ-like glutamine amidotransferase domain THEYE_A0003 PF04358 DsrC like protein THEYE_A0008 PF13247 4Fe-4S dicluster domain THEYE_A0010 PF00117 Glutamine amidotransferase class-I THEYE_A0010 PF06418 CTP synthase N-terminus THEYE_A0011 PF02348 Cytidylyltransferase THEYE_A0012 PF00795 Carbon-nitrogen hydrolase THEYE_A0013 PF00472 RF-1 domain THEYE_A0013 PF03462 PCRF domain THEYE_A0015 PF00308 Bacterial dnaA protein THEYE_A0015 PF08299 Bacterial dnaA protein helix-turn-helix THEYE_A0015 PF11638 DnaA N-terminal domain THEYE_A0016 PF02767 DNA polymerase III beta subunit, central domain THEYE_A0016 PF02768 DNA polymerase III beta subunit, C-terminal domain THEYE_A0016 PF00712 DNA polymerase III beta subunit, N-terminal domain THEYE_A0017 PF18053 DNA gyrase B subunit insert domain THEYE_A0017 PF00986 DNA gyrase B subunit, carboxyl terminus THEYE_A0017 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0017 PF01751 Toprim domain THEYE_A0017 PF00204 DNA gyrase B THEYE_A0018 PF02403 Seryl-tRNA synthetase N-terminal domain THEYE_A0018 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THEYE_A0020 PF01312 FlhB HrpN YscU SpaS Family THEYE_A0021 PF00218 Indole-3-glycerol phosphate synthase THEYE_A0024 PF00501 AMP-binding enzyme THEYE_A0024 PF14535 AMP-binding enzyme C-terminal domain THEYE_A0026 PF01758 Sodium Bile acid symporter family THEYE_A0029 PF13193 AMP-binding enzyme C-terminal domain THEYE_A0029 PF00501 AMP-binding enzyme THEYE_A0029 PF16177 Acetyl-coenzyme A synthetase N-terminus THEYE_A0030 PF00474 Sodium:solute symporter family THEYE_A0031 PF04341 Protein of unknown function, DUF485 THEYE_A0032 PF00929 Exonuclease THEYE_A0032 PF02811 PHP domain THEYE_A0032 PF14579 Helix-hairpin-helix motif THEYE_A0032 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THEYE_A0032 PF11490 DNA polymerase III polC-type N-terminus II THEYE_A0032 PF07733 Bacterial DNA polymerase III alpha NTPase domain THEYE_A0035 PF00474 Sodium:solute symporter family THEYE_A0037 PF00929 Exonuclease THEYE_A0039 PF00072 Response regulator receiver domain THEYE_A0039 PF02954 Bacterial regulatory protein, Fis family THEYE_A0039 PF00158 Sigma-54 interaction domain THEYE_A0041 PF00521 DNA gyrase/topoisomerase IV, subunit A THEYE_A0041 PF03989 DNA gyrase C-terminal domain, beta-propeller THEYE_A0044 PF02457 DisA bacterial checkpoint controller nucleotide-binding THEYE_A0046 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THEYE_A0046 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THEYE_A0046 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THEYE_A0046 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THEYE_A0047 PF00005 ABC transporter THEYE_A0048 PF00528 Binding-protein-dependent transport system inner membrane component THEYE_A0049 PF12849 PBP superfamily domain THEYE_A0050 PF03459 TOBE domain THEYE_A0050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THEYE_A0052 PF01476 LysM domain THEYE_A0052 PF08525 Opacity-associated protein A N-terminal motif THEYE_A0052 PF01551 Peptidase family M23 THEYE_A0054 PF02899 Phage integrase, N-terminal SAM-like domain THEYE_A0054 PF00589 Phage integrase family THEYE_A0060 PF18211 Csm1 subunit domain B THEYE_A0062 PF03787 RAMP superfamily THEYE_A0064 PF03787 RAMP superfamily THEYE_A0069 PF03772 Competence protein THEYE_A0069 PF13567 Domain of unknown function (DUF4131) THEYE_A0069 PF00753 Metallo-beta-lactamase superfamily THEYE_A0070 PF00117 Glutamine amidotransferase class-I THEYE_A0071 PF09107 Elongation factor SelB, winged helix THEYE_A0071 PF09106 Elongation factor SelB, winged helix THEYE_A0071 PF09105 Elongation factor SelB, winged helix THEYE_A0071 PF03144 Elongation factor Tu domain 2 THEYE_A0071 PF00009 Elongation factor Tu GTP binding domain THEYE_A0072 PF13180 PDZ domain THEYE_A0072 PF17820 PDZ domain THEYE_A0074 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase THEYE_A0074 PF02542 YgbB family THEYE_A0075 PF01070 FMN-dependent dehydrogenase THEYE_A0078 PF16199 Radical_SAM C-terminal domain THEYE_A0078 PF04055 Radical SAM superfamily THEYE_A0079 PF13335 Magnesium chelatase, subunit ChlI C-terminal THEYE_A0079 PF01078 Magnesium chelatase, subunit ChlI THEYE_A0081 PF02806 Alpha amylase, C-terminal all-beta domain THEYE_A0081 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THEYE_A0081 PF00128 Alpha amylase, catalytic domain THEYE_A0082 PF01209 ubiE/COQ5 methyltransferase family THEYE_A0083 PF00999 Sodium/hydrogen exchanger family THEYE_A0084 PF00291 Pyridoxal-phosphate dependent enzyme THEYE_A0087 PF03099 Biotin/lipoate A/B protein ligase family THEYE_A0089 PF06230 LpxI C-terminal domain THEYE_A0089 PF17930 LpxI N-terminal domain THEYE_A0090 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 THEYE_A0090 PF00132 Bacterial transferase hexapeptide (six repeats) THEYE_A0091 PF07977 FabA-like domain THEYE_A0092 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD THEYE_A0092 PF00132 Bacterial transferase hexapeptide (six repeats) THEYE_A0094 PF01103 Surface antigen THEYE_A0094 PF07244 Surface antigen variable number repeat THEYE_A0095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THEYE_A0095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THEYE_A0095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THEYE_A0095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THEYE_A0096 PF01050 Mannose-6-phosphate isomerase THEYE_A0096 PF00483 Nucleotidyl transferase THEYE_A0097 PF00677 Lumazine binding domain THEYE_A0098 PF10502 Signal peptidase, peptidase S26 THEYE_A0099 PF03144 Elongation factor Tu domain 2 THEYE_A0099 PF00009 Elongation factor Tu GTP binding domain THEYE_A0099 PF00679 Elongation factor G C-terminus THEYE_A0099 PF06421 GTP-binding protein LepA C-terminus THEYE_A0100 PF01325 Iron dependent repressor, N-terminal DNA binding domain THEYE_A0100 PF00480 ROK family THEYE_A0102 PF00550 Phosphopantetheine attachment site THEYE_A0103 PF02801 Beta-ketoacyl synthase, C-terminal domain THEYE_A0103 PF00109 Beta-ketoacyl synthase, N-terminal domain THEYE_A0110 PF04055 Radical SAM superfamily THEYE_A0110 PF06463 Molybdenum Cofactor Synthesis C THEYE_A0111 PF05221 S-adenosyl-L-homocysteine hydrolase THEYE_A0111 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain THEYE_A0112 PF02772 S-adenosylmethionine synthetase, central domain THEYE_A0112 PF02773 S-adenosylmethionine synthetase, C-terminal domain THEYE_A0112 PF00438 S-adenosylmethionine synthetase, N-terminal domain THEYE_A0113 PF01118 Semialdehyde dehydrogenase, NAD binding domain THEYE_A0113 PF02774 Semialdehyde dehydrogenase, dimerisation domain THEYE_A0114 PF00180 Isocitrate/isopropylmalate dehydrogenase THEYE_A0115 PF00694 Aconitase C-terminal domain THEYE_A0116 PF00440 Bacterial regulatory proteins, tetR family THEYE_A0116 PF08359 YsiA-like protein, C-terminal region THEYE_A0118 PF13533 Biotin-lipoyl like THEYE_A0120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THEYE_A0121 PF00005 ABC transporter THEYE_A0122 PF02687 FtsX-like permease family THEYE_A0122 PF00005 ABC transporter THEYE_A0122 PF12704 MacB-like periplasmic core domain THEYE_A0124 PF02954 Bacterial regulatory protein, Fis family THEYE_A0124 PF00072 Response regulator receiver domain THEYE_A0124 PF00158 Sigma-54 interaction domain THEYE_A0125 PF00072 Response regulator receiver domain THEYE_A0125 PF13188 PAS domain THEYE_A0125 PF08448 PAS fold THEYE_A0125 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0126 PF08448 PAS fold THEYE_A0126 PF00072 Response regulator receiver domain THEYE_A0126 PF13188 PAS domain THEYE_A0126 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0126 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0127 PF01713 Smr domain THEYE_A0127 PF00488 MutS domain V THEYE_A0131 PF03477 ATP cone domain THEYE_A0131 PF02867 Ribonucleotide reductase, barrel domain THEYE_A0131 PF00317 Ribonucleotide reductase, all-alpha domain THEYE_A0132 PF00166 Chaperonin 10 Kd subunit THEYE_A0134 PF04055 Radical SAM superfamily THEYE_A0136 PF01894 Uncharacterised protein family UPF0047 THEYE_A0137 PF00155 Aminotransferase class I and II THEYE_A0140 PF00912 Transglycosylase THEYE_A0141 PF02446 4-alpha-glucanotransferase THEYE_A0142 PF00005 ABC transporter THEYE_A0145 PF00989 PAS fold THEYE_A0145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0145 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0146 PF01966 HD domain THEYE_A0146 PF00072 Response regulator receiver domain THEYE_A0147 PF00202 Aminotransferase class-III THEYE_A0152 PF00342 Phosphoglucose isomerase THEYE_A0153 PF00565 Staphylococcal nuclease homologue THEYE_A0153 PF05901 Excalibur calcium-binding domain THEYE_A0154 PF01202 Shikimate kinase THEYE_A0155 PF01761 3-dehydroquinate synthase THEYE_A0156 PF00072 Response regulator receiver domain THEYE_A0156 PF00486 Transcriptional regulatory protein, C terminal THEYE_A0157 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0157 PF16736 Single Cache-like THEYE_A0157 PF00989 PAS fold THEYE_A0157 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0158 PF01475 Ferric uptake regulator family THEYE_A0159 PF00210 Ferritin-like domain THEYE_A0160 PF00258 Flavodoxin THEYE_A0160 PF00753 Metallo-beta-lactamase superfamily THEYE_A0161 PF02915 Rubrerythrin THEYE_A0164 PF00005 ABC transporter THEYE_A0165 PF01458 Uncharacterized protein family (UPF0051) THEYE_A0166 PF17820 PDZ domain THEYE_A0166 PF13180 PDZ domain THEYE_A0167 PF00923 Transaldolase/Fructose-6-phosphate aldolase THEYE_A0170 PF10150 Ribonuclease E/G family THEYE_A0170 PF00575 S1 RNA binding domain THEYE_A0172 PF03707 Bacterial signalling protein N terminal repeat THEYE_A0172 PF00990 Diguanylate cyclase, GGDEF domain THEYE_A0172 PF00563 EAL domain THEYE_A0173 PF13426 PAS domain THEYE_A0173 PF07536 HWE histidine kinase THEYE_A0173 PF13581 Histidine kinase-like ATPase domain THEYE_A0174 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEYE_A0174 PF00672 HAMP domain THEYE_A0174 PF02743 Cache domain THEYE_A0181 PF00072 Response regulator receiver domain THEYE_A0182 PF00072 Response regulator receiver domain THEYE_A0183 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0183 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0183 PF00989 PAS fold THEYE_A0186 PF01790 Prolipoprotein diacylglyceryl transferase THEYE_A0189 PF01209 ubiE/COQ5 methyltransferase family THEYE_A0190 PF01702 Queuine tRNA-ribosyltransferase THEYE_A0191 PF03063 Prismane/CO dehydrogenase family THEYE_A0193 PF02335 Cytochrome c552 THEYE_A0194 PF00027 Cyclic nucleotide-binding domain THEYE_A0194 PF00325 Bacterial regulatory proteins, crp family THEYE_A0198 PF00596 Class II Aldolase and Adducin N-terminal domain THEYE_A0199 PF01370 NAD dependent epimerase/dehydratase family THEYE_A0200 PF01022 Bacterial regulatory protein, arsR family THEYE_A0202 PF01728 FtsJ-like methyltransferase THEYE_A0202 PF01479 S4 domain THEYE_A0203 PF00348 Polyprenyl synthetase THEYE_A0205 PF00117 Glutamine amidotransferase class-I THEYE_A0205 PF00958 GMP synthase C terminal domain THEYE_A0206 PF00478 IMP dehydrogenase / GMP reductase domain THEYE_A0206 PF00571 CBS domain THEYE_A0208 PF00925 GTP cyclohydrolase II THEYE_A0208 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase THEYE_A0212 PF00263 Bacterial type II and III secretion system protein THEYE_A0212 PF03958 Bacterial type II/III secretion system short domain THEYE_A0213 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain THEYE_A0213 PF00437 Type II/IV secretion system protein THEYE_A0214 PF00482 Type II secretion system (T2SS), protein F THEYE_A0215 PF01471 Putative peptidoglycan binding domain THEYE_A0215 PF13401 AAA domain THEYE_A0217 PF13361 UvrD-like helicase C-terminal domain THEYE_A0217 PF00580 UvrD/REP helicase N-terminal domain THEYE_A0220 PF06508 Queuosine biosynthesis protein QueC THEYE_A0221 PF02660 Glycerol-3-phosphate acyltransferase THEYE_A0222 PF01066 CDP-alcohol phosphatidyltransferase THEYE_A0224 PF00293 NUDIX domain THEYE_A0225 PF17820 PDZ domain THEYE_A0225 PF02163 Peptidase family M50 THEYE_A0226 PF13288 DXP reductoisomerase C-terminal domain THEYE_A0226 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase THEYE_A0226 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain THEYE_A0228 PF01255 Putative undecaprenyl diphosphate synthase THEYE_A0232 PF00005 ABC transporter THEYE_A0233 PF04552 Sigma-54, DNA binding domain THEYE_A0233 PF04963 Sigma-54 factor, core binding domain THEYE_A0233 PF00309 Sigma-54 factor, Activator interacting domain (AID) THEYE_A0234 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus THEYE_A0234 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein THEYE_A0235 PF03668 P-loop ATPase protein family THEYE_A0236 PF00430 ATP synthase B/B' CF(0) THEYE_A0237 PF00430 ATP synthase B/B' CF(0) THEYE_A0238 PF00213 ATP synthase delta (OSCP) subunit THEYE_A0239 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THEYE_A0239 PF00306 ATP synthase alpha/beta chain, C terminal domain THEYE_A0239 PF02874 ATP synthase alpha/beta family, beta-barrel domain THEYE_A0240 PF00231 ATP synthase THEYE_A0241 PF02874 ATP synthase alpha/beta family, beta-barrel domain THEYE_A0241 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THEYE_A0242 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain THEYE_A0242 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain THEYE_A0244 PF03601 Conserved hypothetical protein 698 THEYE_A0245 PF02675 S-adenosylmethionine decarboxylase THEYE_A0246 PF17284 Spermidine synthase tetramerisation domain THEYE_A0247 PF00162 Phosphoglycerate kinase THEYE_A0248 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THEYE_A0248 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain THEYE_A0251 PF00004 ATPase family associated with various cellular activities (AAA) THEYE_A0251 PF07724 AAA domain (Cdc48 subfamily) THEYE_A0251 PF17871 AAA lid domain THEYE_A0251 PF02861 Clp amino terminal domain, pathogenicity island component THEYE_A0251 PF10431 C-terminal, D2-small domain, of ClpB protein THEYE_A0252 PF08534 Redoxin THEYE_A0254 PF05697 Bacterial trigger factor protein (TF) THEYE_A0254 PF05698 Bacterial trigger factor protein (TF) C-terminus THEYE_A0255 PF00574 Clp protease THEYE_A0256 PF07724 AAA domain (Cdc48 subfamily) THEYE_A0256 PF10431 C-terminal, D2-small domain, of ClpB protein THEYE_A0256 PF06689 ClpX C4-type zinc finger THEYE_A0259 PF06490 Flagellar regulatory protein FleQ THEYE_A0259 PF00158 Sigma-54 interaction domain THEYE_A0259 PF02954 Bacterial regulatory protein, Fis family THEYE_A0262 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0262 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0262 PF00989 PAS fold THEYE_A0263 PF02954 Bacterial regulatory protein, Fis family THEYE_A0263 PF00158 Sigma-54 interaction domain THEYE_A0263 PF00072 Response regulator receiver domain THEYE_A0264 PF00460 Flagella basal body rod protein THEYE_A0265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEYE_A0265 PF00460 Flagella basal body rod protein THEYE_A0267 PF08345 Flagellar M-ring protein C-terminal THEYE_A0267 PF01514 Secretory protein of YscJ/FliF family THEYE_A0268 PF14842 FliG N-terminal domain THEYE_A0268 PF14841 FliG middle domain THEYE_A0268 PF01706 FliG C-terminal domain THEYE_A0270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THEYE_A0270 PF18269 T3SS EscN ATPase C-terminal domain THEYE_A0270 PF02874 ATP synthase alpha/beta family, beta-barrel domain THEYE_A0274 PF03963 Flagellar hook capping protein - N-terminal region THEYE_A0275 PF00460 Flagella basal body rod protein THEYE_A0275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEYE_A0275 PF07559 Flagellar basal body protein FlaE THEYE_A0276 PF01479 S4 domain THEYE_A0276 PF00579 tRNA synthetases class I (W and Y) THEYE_A0277 PF02548 Ketopantoate hydroxymethyltransferase THEYE_A0278 PF10141 Single-strand DNA-specific exonuclease, C terminal domain THEYE_A0278 PF01368 DHH family THEYE_A0278 PF02272 DHHA1 domain THEYE_A0278 PF17768 RecJ OB domain THEYE_A0279 PF07549 SecD/SecF GG Motif THEYE_A0279 PF02355 Protein export membrane protein THEYE_A0280 PF07549 SecD/SecF GG Motif THEYE_A0280 PF02355 Protein export membrane protein THEYE_A0281 PF02699 Preprotein translocase subunit THEYE_A0292 PF07057 DNA helicase TraI THEYE_A0292 PF18340 DNA relaxase TraI 2B/2B-like domain THEYE_A0292 PF08751 TrwC relaxase THEYE_A0292 PF18272 single-stranded DNA binding TraI N-terminal subdomain THEYE_A0306 PF02899 Phage integrase, N-terminal SAM-like domain THEYE_A0306 PF00589 Phage integrase family THEYE_A0309 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system THEYE_A0315 PF00589 Phage integrase family THEYE_A0318 PF08745 PINc domain ribonuclease THEYE_A0319 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit THEYE_A0320 PF14579 Helix-hairpin-helix motif THEYE_A0320 PF02811 PHP domain THEYE_A0320 PF07733 Bacterial DNA polymerase III alpha NTPase domain THEYE_A0320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THEYE_A0322 PF01066 CDP-alcohol phosphatidyltransferase THEYE_A0324 PF00834 Ribulose-phosphate 3 epimerase family THEYE_A0326 PF01189 16S rRNA methyltransferase RsmB/F THEYE_A0326 PF01029 NusB family THEYE_A0328 PF02911 Formyl transferase, C-terminal domain THEYE_A0328 PF00551 Formyl transferase THEYE_A0329 PF01327 Polypeptide deformylase THEYE_A0331 PF00258 Flavodoxin THEYE_A0332 PF03853 YjeF-related protein N-terminus THEYE_A0332 PF01256 Carbohydrate kinase THEYE_A0333 PF08032 RNA 2'-O ribose methyltransferase substrate binding THEYE_A0333 PF00588 SpoU rRNA Methylase family THEYE_A0334 PF01381 Helix-turn-helix THEYE_A0335 PF01548 Transposase THEYE_A0335 PF02371 Transposase IS116/IS110/IS902 family THEYE_A0336 PF01281 Ribosomal protein L9, N-terminal domain THEYE_A0336 PF03948 Ribosomal protein L9, C-terminal domain THEYE_A0337 PF00772 DnaB-like helicase N terminal domain THEYE_A0337 PF03796 DnaB-like helicase C terminal domain THEYE_A0338 PF01875 Memo-like protein THEYE_A0339 PF12804 MobA-like NTP transferase domain THEYE_A0340 PF02416 mttA/Hcf106 family THEYE_A0341 PF00842 Alanine racemase, C-terminal domain THEYE_A0341 PF01168 Alanine racemase, N-terminal domain THEYE_A0342 PF00155 Aminotransferase class I and II THEYE_A0343 PF07650 KH domain THEYE_A0343 PF01926 50S ribosome-binding GTPase THEYE_A0344 PF02577 Bifunctional nuclease THEYE_A0345 PF11967 Recombination protein O N terminal THEYE_A0345 PF02565 Recombination protein O C terminal THEYE_A0348 PF01914 MarC family integral membrane protein THEYE_A0349 PF12557 Cob(I)alamin adenosyltransferase N terminal THEYE_A0349 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP THEYE_A0350 PF00300 Histidine phosphatase superfamily (branch 1) THEYE_A0351 PF02606 Tetraacyldisaccharide-1-P 4'-kinase THEYE_A0360 PF02616 Segregation and condensation protein ScpA THEYE_A0361 PF03453 MoeA N-terminal region (domain I and II) THEYE_A0361 PF03454 MoeA C-terminal region (domain IV) THEYE_A0361 PF00994 Probable molybdopterin binding domain THEYE_A0362 PF08338 Domain of unknown function (DUF1731) THEYE_A0362 PF01370 NAD dependent epimerase/dehydratase family THEYE_A0363 PF00011 Hsp20/alpha crystallin family THEYE_A0364 PF02769 AIR synthase related protein, C-terminal domain THEYE_A0364 PF00586 AIR synthase related protein, N-terminal domain THEYE_A0365 PF02618 YceG-like family THEYE_A0366 PF04551 GcpE protein THEYE_A0367 PF01197 Ribosomal protein L31 THEYE_A0368 PF07136 Protein of unknown function (DUF1385) THEYE_A0369 PF00472 RF-1 domain THEYE_A0369 PF03462 PCRF domain THEYE_A0370 PF17827 PrmC N-terminal domain THEYE_A0370 PF05175 Methyltransferase small domain THEYE_A0372 PF00483 Nucleotidyl transferase THEYE_A0373 PF05231 MASE1 THEYE_A0373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0373 PF07730 Histidine kinase THEYE_A0374 PF00196 Bacterial regulatory proteins, luxR family THEYE_A0374 PF00072 Response regulator receiver domain THEYE_A0375 PF07690 Major Facilitator Superfamily THEYE_A0376 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded THEYE_A0378 PF01555 DNA methylase THEYE_A0381 PF04002 RadC-like JAB domain THEYE_A0382 PF01588 Putative tRNA binding domain THEYE_A0382 PF09334 tRNA synthetases class I (M) THEYE_A0382 PF08264 Anticodon-binding domain of tRNA THEYE_A0383 PF04468 PSP1 C-terminal conserved region THEYE_A0384 PF09115 DNA polymerase III, delta subunit, C terminal THEYE_A0385 PF02223 Thymidylate kinase THEYE_A0388 PF01869 BadF/BadG/BcrA/BcrD ATPase family THEYE_A0389 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase THEYE_A0390 PF02743 Cache domain THEYE_A0390 PF00672 HAMP domain THEYE_A0390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEYE_A0391 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0391 PF02895 Signal transducing histidine kinase, homodimeric domain THEYE_A0391 PF01627 Hpt domain THEYE_A0391 PF00072 Response regulator receiver domain THEYE_A0391 PF01584 CheW-like domain THEYE_A0393 PF00072 Response regulator receiver domain THEYE_A0393 PF00486 Transcriptional regulatory protein, C terminal THEYE_A0394 PF00486 Transcriptional regulatory protein, C terminal THEYE_A0394 PF00072 Response regulator receiver domain THEYE_A0397 PF02581 Thiamine monophosphate synthase THEYE_A0398 PF02785 Biotin carboxylase C-terminal domain THEYE_A0398 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THEYE_A0398 PF00289 Biotin carboxylase, N-terminal domain THEYE_A0399 PF00364 Biotin-requiring enzyme THEYE_A0400 PF01132 Elongation factor P (EF-P) OB domain THEYE_A0400 PF09285 Elongation factor P, C-terminal THEYE_A0400 PF08207 Elongation factor P (EF-P) KOW-like domain THEYE_A0401 PF01321 Creatinase/Prolidase N-terminal domain THEYE_A0401 PF00557 Metallopeptidase family M24 THEYE_A0402 PF02441 Flavoprotein THEYE_A0402 PF04127 DNA / pantothenate metabolism flavoprotein THEYE_A0403 PF01192 RNA polymerase Rpb6 THEYE_A0404 PF00625 Guanylate kinase THEYE_A0405 PF04025 Domain of unknown function (DUF370) THEYE_A0406 PF08340 Domain of unknown function (DUF1732) THEYE_A0406 PF03755 YicC-like family, N-terminal region THEYE_A0407 PF02594 Uncharacterised ACR, YggU family COG1872 THEYE_A0411 PF00535 Glycosyl transferase family 2 THEYE_A0417 PF00486 Transcriptional regulatory protein, C terminal THEYE_A0417 PF00072 Response regulator receiver domain THEYE_A0418 PF00263 Bacterial type II and III secretion system protein THEYE_A0418 PF03958 Bacterial type II/III secretion system short domain THEYE_A0418 PF11741 AMIN domain THEYE_A0418 PF07660 Secretin and TonB N terminus short domain THEYE_A0423 PF08501 Shikimate dehydrogenase substrate binding domain THEYE_A0423 PF18317 Shikimate 5'-dehydrogenase C-terminal domain THEYE_A0423 PF01488 Shikimate / quinate 5-dehydrogenase THEYE_A0424 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain THEYE_A0424 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain THEYE_A0424 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THEYE_A0425 PF00534 Glycosyl transferases group 1 THEYE_A0425 PF13439 Glycosyltransferase Family 4 THEYE_A0426 PF01075 Glycosyltransferase family 9 (heptosyltransferase) THEYE_A0429 PF13439 Glycosyltransferase Family 4 THEYE_A0429 PF00534 Glycosyl transferases group 1 THEYE_A0432 PF01472 PUA domain THEYE_A0432 PF00696 Amino acid kinase family THEYE_A0433 PF01018 GTP1/OBG THEYE_A0433 PF01926 50S ribosome-binding GTPase THEYE_A0434 PF01016 Ribosomal L27 protein THEYE_A0435 PF00829 Ribosomal prokaryotic L21 protein THEYE_A0436 PF01634 ATP phosphoribosyltransferase THEYE_A0436 PF08029 HisG, C-terminal domain THEYE_A0438 PF00672 HAMP domain THEYE_A0438 PF16591 Helical bimodular sensor domain THEYE_A0438 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEYE_A0439 PF00270 DEAD/DEAH box helicase THEYE_A0439 PF00271 Helicase conserved C-terminal domain THEYE_A0440 PF12729 Four helix bundle sensory module for signal transduction THEYE_A0440 PF00672 HAMP domain THEYE_A0440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEYE_A0443 PF05690 Thiazole biosynthesis protein ThiG THEYE_A0444 PF02581 Thiamine monophosphate synthase THEYE_A0445 PF01964 Radical SAM ThiC family THEYE_A0448 PF00795 Carbon-nitrogen hydrolase THEYE_A0448 PF02540 NAD synthase THEYE_A0449 PF01555 DNA methylase THEYE_A0451 PF01555 DNA methylase THEYE_A0454 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THEYE_A0455 PF00107 Zinc-binding dehydrogenase THEYE_A0455 PF08240 Alcohol dehydrogenase GroES-like domain THEYE_A0457 PF05683 Fumarase C-terminus THEYE_A0457 PF05681 Fumarate hydratase (Fumerase) THEYE_A0458 PF12627 Probable RNA and SrmB- binding site of polymerase A THEYE_A0458 PF13735 tRNA nucleotidyltransferase domain 2 putative THEYE_A0458 PF01743 Poly A polymerase head domain THEYE_A0459 PF02580 D-Tyr-tRNA(Tyr) deacylase THEYE_A0460 PF00072 Response regulator receiver domain THEYE_A0461 PF02569 Pantoate-beta-alanine ligase THEYE_A0462 PF02698 DUF218 domain THEYE_A0463 PF00953 Glycosyl transferase family 4 THEYE_A0463 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 THEYE_A0466 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system THEYE_A0468 PF01370 NAD dependent epimerase/dehydratase family THEYE_A0469 PF16363 GDP-mannose 4,6 dehydratase THEYE_A0471 PF01370 NAD dependent epimerase/dehydratase family THEYE_A0472 PF16363 GDP-mannose 4,6 dehydratase THEYE_A0473 PF16363 GDP-mannose 4,6 dehydratase THEYE_A0479 PF03102 NeuB family THEYE_A0479 PF08666 SAF domain THEYE_A0480 PF02350 UDP-N-acetylglucosamine 2-epimerase THEYE_A0482 PF02348 Cytidylyltransferase THEYE_A0484 PF00733 Asparagine synthase THEYE_A0484 PF13537 Glutamine amidotransferase domain THEYE_A0485 PF08241 Methyltransferase domain THEYE_A0486 PF00534 Glycosyl transferases group 1 THEYE_A0486 PF13439 Glycosyltransferase Family 4 THEYE_A0487 PF00535 Glycosyl transferase family 2 THEYE_A0491 PF01209 ubiE/COQ5 methyltransferase family THEYE_A0492 PF00535 Glycosyl transferase family 2 THEYE_A0495 PF01370 NAD dependent epimerase/dehydratase family THEYE_A0496 PF02894 Oxidoreductase family, C-terminal alpha/beta domain THEYE_A0496 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THEYE_A0497 PF00534 Glycosyl transferases group 1 THEYE_A0497 PF13579 Glycosyl transferase 4-like domain THEYE_A0498 PF16363 GDP-mannose 4,6 dehydratase THEYE_A0499 PF02350 UDP-N-acetylglucosamine 2-epimerase THEYE_A0504 PF08267 Cobalamin-independent synthase, N-terminal domain THEYE_A0504 PF01717 Cobalamin-independent synthase, Catalytic domain THEYE_A0506 PF00425 chorismate binding enzyme THEYE_A0506 PF04715 Anthranilate synthase component I, N terminal region THEYE_A0507 PF00117 Glutamine amidotransferase class-I THEYE_A0508 PF00591 Glycosyl transferase family, a/b domain THEYE_A0508 PF02885 Glycosyl transferase family, helical bundle domain THEYE_A0513 PF01268 Formate--tetrahydrofolate ligase THEYE_A0516 PF07669 Eco57I restriction-modification methylase THEYE_A0516 PF12950 TaqI-like C-terminal specificity domain THEYE_A0518 PF01555 DNA methylase THEYE_A0525 PF00689 Cation transporting ATPase, C-terminus THEYE_A0525 PF00690 Cation transporter/ATPase, N-terminus THEYE_A0529 PF04389 Peptidase family M28 THEYE_A0531 PF04608 Phosphatidylglycerophosphatase A THEYE_A0533 PF00154 recA bacterial DNA recombination protein THEYE_A0534 PF02631 RecX family THEYE_A0536 PF01411 tRNA synthetases class II (A) THEYE_A0536 PF02272 DHHA1 domain THEYE_A0536 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THEYE_A0538 PF12390 Selenocysteine synthase N terminal THEYE_A0538 PF03841 L-seryl-tRNA selenium transferase THEYE_A0539 PF01966 HD domain THEYE_A0539 PF13286 Phosphohydrolase-associated domain THEYE_A0540 PF01648 4'-phosphopantetheinyl transferase superfamily THEYE_A0541 PF01272 Transcription elongation factor, GreA/GreB, C-term THEYE_A0541 PF03449 Transcription elongation factor, N-terminal THEYE_A0542 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B THEYE_A0543 PF01180 Dihydroorotate dehydrogenase THEYE_A0545 PF01430 Hsp33 protein THEYE_A0546 PF04679 ATP dependent DNA ligase C terminal region THEYE_A0546 PF01068 ATP dependent DNA ligase domain THEYE_A0546 PF13298 DNA polymerase Ligase (LigD) THEYE_A0547 PF01142 tRNA pseudouridine synthase D (TruD) THEYE_A0549 PF00849 RNA pseudouridylate synthase THEYE_A0549 PF01479 S4 domain THEYE_A0550 PF09312 SurA N-terminal domain THEYE_A0550 PF00639 PPIC-type PPIASE domain THEYE_A0551 PF02769 AIR synthase related protein, C-terminal domain THEYE_A0551 PF00586 AIR synthase related protein, N-terminal domain THEYE_A0553 PF00206 Lyase THEYE_A0553 PF14698 Argininosuccinate lyase C-terminal THEYE_A0554 PF03764 Elongation factor G, domain IV THEYE_A0554 PF00679 Elongation factor G C-terminus THEYE_A0554 PF03144 Elongation factor Tu domain 2 THEYE_A0554 PF00009 Elongation factor Tu GTP binding domain THEYE_A0554 PF14492 Elongation Factor G, domain II THEYE_A0555 PF00206 Lyase THEYE_A0555 PF10397 Adenylosuccinate lyase C-terminus THEYE_A0556 PF16198 tRNA pseudouridylate synthase B C-terminal domain THEYE_A0556 PF01509 TruB family pseudouridylate synthase (N terminal domain) THEYE_A0558 PF08245 Mur ligase middle domain THEYE_A0558 PF02875 Mur ligase family, glutamate ligase domain THEYE_A0559 PF17848 Acetyl-coA carboxylase zinc finger domain THEYE_A0559 PF01039 Carboxyl transferase domain THEYE_A0560 PF00290 Tryptophan synthase alpha chain THEYE_A0561 PF00291 Pyridoxal-phosphate dependent enzyme THEYE_A0562 PF03109 ABC1 family THEYE_A0563 PF01464 Transglycosylase SLT domain THEYE_A0564 PF02445 Quinolinate synthetase A protein THEYE_A0567 PF02770 Acyl-CoA dehydrogenase, middle domain THEYE_A0567 PF00441 Acyl-CoA dehydrogenase, C-terminal domain THEYE_A0567 PF02771 Acyl-CoA dehydrogenase, N-terminal domain THEYE_A0568 PF01523 Putative modulator of DNA gyrase THEYE_A0569 PF01242 6-pyruvoyl tetrahydropterin synthase THEYE_A0570 PF00156 Phosphoribosyl transferase domain THEYE_A0571 PF02163 Peptidase family M50 THEYE_A0571 PF00571 CBS domain THEYE_A0572 PF00689 Cation transporting ATPase, C-terminus THEYE_A0572 PF00690 Cation transporter/ATPase, N-terminus THEYE_A0576 PF01850 PIN domain THEYE_A0580 PF00501 AMP-binding enzyme THEYE_A0580 PF13193 AMP-binding enzyme C-terminal domain THEYE_A0581 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus THEYE_A0581 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus THEYE_A0583 PF00814 Glycoprotease family THEYE_A0584 PF02527 rRNA small subunit methyltransferase G THEYE_A0585 PF13932 GidA associated domain THEYE_A0585 PF01134 Glucose inhibited division protein A THEYE_A0588 PF00535 Glycosyl transferase family 2 THEYE_A0589 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase THEYE_A0593 PF01370 NAD dependent epimerase/dehydratase family THEYE_A0594 PF00155 Aminotransferase class I and II THEYE_A0599 PF05567 Neisseria PilC beta-propeller domain THEYE_A0604 PF00486 Transcriptional regulatory protein, C terminal THEYE_A0604 PF00072 Response regulator receiver domain THEYE_A0605 PF00118 TCP-1/cpn60 chaperonin family THEYE_A0606 PF00166 Chaperonin 10 Kd subunit THEYE_A0611 PF00486 Transcriptional regulatory protein, C terminal THEYE_A0611 PF00072 Response regulator receiver domain THEYE_A0612 PF00989 PAS fold THEYE_A0612 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0612 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0612 PF00672 HAMP domain THEYE_A0612 PF18698 Histidine kinase sensor domain THEYE_A0614 PF01206 Sulfurtransferase TusA THEYE_A0617 PF02938 GAD domain THEYE_A0617 PF00152 tRNA synthetases class II (D, K and N) THEYE_A0617 PF01336 OB-fold nucleic acid binding domain THEYE_A0623 PF01551 Peptidase family M23 THEYE_A0623 PF01464 Transglycosylase SLT domain THEYE_A0623 PF10145 Phage-related minor tail protein THEYE_A0624 PF01264 Chorismate synthase THEYE_A0626 PF06480 FtsH Extracellular THEYE_A0626 PF17862 AAA+ lid domain THEYE_A0626 PF00004 ATPase family associated with various cellular activities (AAA) THEYE_A0626 PF01434 Peptidase family M41 THEYE_A0627 PF00809 Pterin binding enzyme THEYE_A0628 PF03485 Arginyl tRNA synthetase N terminal domain THEYE_A0628 PF00750 tRNA synthetases class I (R) THEYE_A0628 PF05746 DALR anticodon binding domain THEYE_A0629 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal THEYE_A0629 PF02769 AIR synthase related protein, C-terminal domain THEYE_A0629 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain THEYE_A0631 PF07498 Rho termination factor, N-terminal domain THEYE_A0631 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THEYE_A0631 PF07497 Rho termination factor, RNA-binding domain THEYE_A0633 PF18211 Csm1 subunit domain B THEYE_A0635 PF03787 RAMP superfamily THEYE_A0637 PF03787 RAMP superfamily THEYE_A0640 PF00271 Helicase conserved C-terminal domain THEYE_A0640 PF12419 SNF2 Helicase protein THEYE_A0640 PF00176 SNF2 family N-terminal domain THEYE_A0641 PF00149 Calcineurin-like phosphoesterase THEYE_A0642 PF13175 AAA ATPase domain THEYE_A0643 PF09827 CRISPR associated protein Cas2 THEYE_A0644 PF01867 CRISPR associated protein Cas1 THEYE_A0646 PF09827 CRISPR associated protein Cas2 THEYE_A0648 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain THEYE_A0648 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain THEYE_A0650 PF08502 LeuA allosteric (dimerisation) domain THEYE_A0650 PF00682 HMGL-like THEYE_A0651 PF01066 CDP-alcohol phosphatidyltransferase THEYE_A0652 PF02666 Phosphatidylserine decarboxylase THEYE_A0653 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain THEYE_A0653 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain THEYE_A0654 PF06827 Zinc finger found in FPG and IleRS THEYE_A0654 PF08264 Anticodon-binding domain of tRNA THEYE_A0654 PF00133 tRNA synthetases class I (I, L, M and V) THEYE_A0655 PF01252 Signal peptidase (SPase) II THEYE_A0656 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE THEYE_A0657 PF01513 ATP-NAD kinase THEYE_A0658 PF03167 Uracil DNA glycosylase superfamily THEYE_A0660 PF13580 SIS domain THEYE_A0661 PF02075 Crossover junction endodeoxyribonuclease RuvC THEYE_A0662 PF00850 Histone deacetylase domain THEYE_A0664 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEYE_A0664 PF13426 PAS domain THEYE_A0664 PF08447 PAS fold THEYE_A0665 PF02589 LUD domain THEYE_A0665 PF13183 4Fe-4S dicluster domain THEYE_A0665 PF11870 Domain of unknown function (DUF3390) THEYE_A0666 PF02589 LUD domain THEYE_A0667 PF02754 Cysteine-rich domain THEYE_A0668 PF01565 FAD binding domain THEYE_A0668 PF02913 FAD linked oxidases, C-terminal domain THEYE_A0669 PF02652 L-lactate permease THEYE_A0670 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THEYE_A0670 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THEYE_A0671 PF00202 Aminotransferase class-III THEYE_A0672 PF01812 5-formyltetrahydrofolate cyclo-ligase family THEYE_A0673 PF01227 GTP cyclohydrolase I THEYE_A0674 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THEYE_A0674 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain THEYE_A0677 PF00437 Type II/IV secretion system protein THEYE_A0677 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain THEYE_A0678 PF00890 FAD binding domain THEYE_A0678 PF02910 Fumarate reductase flavoprotein C-term THEYE_A0679 PF00224 Pyruvate kinase, barrel domain THEYE_A0679 PF02887 Pyruvate kinase, alpha/beta domain THEYE_A0679 PF00391 PEP-utilising enzyme, mobile domain THEYE_A0680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THEYE_A0680 PF03466 LysR substrate binding domain THEYE_A0681 PF02583 Metal-sensitive transcriptional repressor THEYE_A0683 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THEYE_A0683 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEYE_A0683 PF13247 4Fe-4S dicluster domain THEYE_A0686 PF02146 Sir2 family THEYE_A0687 PF02151 UvrB/uvrC motif THEYE_A0687 PF12344 Ultra-violet resistance protein B THEYE_A0687 PF17757 UvrB interaction domain THEYE_A0687 PF00271 Helicase conserved C-terminal domain THEYE_A0687 PF04851 Type III restriction enzyme, res subunit THEYE_A0690 PF00490 Delta-aminolevulinic acid dehydratase THEYE_A0691 PF01521 Iron-sulphur cluster biosynthesis THEYE_A0692 PF02634 FdhD/NarQ family THEYE_A0693 PF00730 HhH-GPD superfamily base excision DNA repair protein THEYE_A0693 PF00633 Helix-hairpin-helix motif THEYE_A0694 PF08240 Alcohol dehydrogenase GroES-like domain THEYE_A0695 PF00990 Diguanylate cyclase, GGDEF domain THEYE_A0696 PF00270 DEAD/DEAH box helicase THEYE_A0696 PF00271 Helicase conserved C-terminal domain THEYE_A0696 PF17191 RecG wedge domain THEYE_A0697 PF08529 NusA N-terminal domain THEYE_A0697 PF00575 S1 RNA binding domain THEYE_A0697 PF13184 NusA-like KH domain THEYE_A0698 PF02576 RimP N-terminal domain THEYE_A0698 PF17384 RimP C-terminal SH3 domain THEYE_A0703 PF00271 Helicase conserved C-terminal domain THEYE_A0703 PF18319 PriA DNA helicase Cys-rich region (CRR) domain THEYE_A0703 PF17764 3′ DNA-binding domain (3′BD) THEYE_A0703 PF00270 DEAD/DEAH box helicase THEYE_A0703 PF18074 Primosomal protein N C-terminal domain THEYE_A0704 PF06574 FAD synthetase THEYE_A0704 PF01687 Riboflavin kinase THEYE_A0705 PF01121 Dephospho-CoA kinase THEYE_A0706 PF05192 MutS domain III THEYE_A0706 PF01624 MutS domain I THEYE_A0706 PF05190 MutS family domain IV THEYE_A0706 PF05188 MutS domain II THEYE_A0706 PF00488 MutS domain V THEYE_A0707 PF00158 Sigma-54 interaction domain THEYE_A0707 PF00072 Response regulator receiver domain THEYE_A0707 PF02954 Bacterial regulatory protein, Fis family THEYE_A0711 PF00582 Universal stress protein family THEYE_A0712 PF00072 Response regulator receiver domain THEYE_A0712 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0712 PF13426 PAS domain THEYE_A0716 PF01488 Shikimate / quinate 5-dehydrogenase THEYE_A0716 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain THEYE_A0716 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain THEYE_A0717 PF03900 Porphobilinogen deaminase, C-terminal domain THEYE_A0717 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain THEYE_A0718 PF02602 Uroporphyrinogen-III synthase HemD THEYE_A0718 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THEYE_A0719 PF01593 Flavin containing amine oxidoreductase THEYE_A0724 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0724 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0725 PF00158 Sigma-54 interaction domain THEYE_A0725 PF00072 Response regulator receiver domain THEYE_A0725 PF02954 Bacterial regulatory protein, Fis family THEYE_A0726 PF00391 PEP-utilising enzyme, mobile domain THEYE_A0726 PF02887 Pyruvate kinase, alpha/beta domain THEYE_A0726 PF00224 Pyruvate kinase, barrel domain THEYE_A0727 PF07702 UTRA domain THEYE_A0727 PF00392 Bacterial regulatory proteins, gntR family THEYE_A0731 PF03600 Citrate transporter THEYE_A0732 PF00582 Universal stress protein family THEYE_A0733 PF02954 Bacterial regulatory protein, Fis family THEYE_A0733 PF00158 Sigma-54 interaction domain THEYE_A0733 PF00072 Response regulator receiver domain THEYE_A0734 PF00072 Response regulator receiver domain THEYE_A0734 PF02954 Bacterial regulatory protein, Fis family THEYE_A0734 PF00158 Sigma-54 interaction domain THEYE_A0735 PF01555 DNA methylase THEYE_A0739 PF00072 Response regulator receiver domain THEYE_A0739 PF00486 Transcriptional regulatory protein, C terminal THEYE_A0741 PF02954 Bacterial regulatory protein, Fis family THEYE_A0741 PF00072 Response regulator receiver domain THEYE_A0741 PF00158 Sigma-54 interaction domain THEYE_A0742 PF13188 PAS domain THEYE_A0742 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0742 PF13426 PAS domain THEYE_A0742 PF00989 PAS fold THEYE_A0742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0743 PF02954 Bacterial regulatory protein, Fis family THEYE_A0743 PF00072 Response regulator receiver domain THEYE_A0743 PF00158 Sigma-54 interaction domain THEYE_A0744 PF00989 PAS fold THEYE_A0744 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0744 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0746 PF13426 PAS domain THEYE_A0746 PF08447 PAS fold THEYE_A0746 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEYE_A0747 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0747 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0747 PF00989 PAS fold THEYE_A0747 PF08447 PAS fold THEYE_A0749 PF09335 SNARE associated Golgi protein THEYE_A0751 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0751 PF18698 Histidine kinase sensor domain THEYE_A0751 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0751 PF00672 HAMP domain THEYE_A0751 PF00989 PAS fold THEYE_A0752 PF00072 Response regulator receiver domain THEYE_A0752 PF00486 Transcriptional regulatory protein, C terminal THEYE_A0755 PF00005 ABC transporter THEYE_A0758 PF02190 ATP-dependent protease La (LON) substrate-binding domain THEYE_A0758 PF05362 Lon protease (S16) C-terminal proteolytic domain THEYE_A0758 PF00004 ATPase family associated with various cellular activities (AAA) THEYE_A0761 PF01925 Sulfite exporter TauE/SafE THEYE_A0762 PF00582 Universal stress protein family THEYE_A0764 PF00005 ABC transporter THEYE_A0765 PF12399 Branched-chain amino acid ATP-binding cassette transporter THEYE_A0765 PF00005 ABC transporter THEYE_A0766 PF11862 Domain of unknown function (DUF3382) THEYE_A0766 PF02653 Branched-chain amino acid transport system / permease component THEYE_A0767 PF02653 Branched-chain amino acid transport system / permease component THEYE_A0769 PF00390 Malic enzyme, N-terminal domain THEYE_A0769 PF03949 Malic enzyme, NAD binding domain THEYE_A0770 PF00890 FAD binding domain THEYE_A0770 PF02910 Fumarate reductase flavoprotein C-term THEYE_A0771 PF13237 4Fe-4S dicluster domain THEYE_A0771 PF13085 2Fe-2S iron-sulfur cluster binding domain THEYE_A0774 PF00482 Type II secretion system (T2SS), protein F THEYE_A0775 PF01435 Peptidase family M48 THEYE_A0777 PF00672 HAMP domain THEYE_A0777 PF02743 Cache domain THEYE_A0777 PF00211 Adenylate and Guanylate cyclase catalytic domain THEYE_A0780 PF14535 AMP-binding enzyme C-terminal domain THEYE_A0780 PF00501 AMP-binding enzyme THEYE_A0782 PF14535 AMP-binding enzyme C-terminal domain THEYE_A0782 PF00501 AMP-binding enzyme THEYE_A0785 PF00682 HMGL-like THEYE_A0785 PF08502 LeuA allosteric (dimerisation) domain THEYE_A0786 PF01502 Phosphoribosyl-AMP cyclohydrolase THEYE_A0786 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase THEYE_A0787 PF01230 HIT domain THEYE_A0790 PF00171 Aldehyde dehydrogenase family THEYE_A0791 PF01467 Cytidylyltransferase-like THEYE_A0792 PF02954 Bacterial regulatory protein, Fis family THEYE_A0792 PF00072 Response regulator receiver domain THEYE_A0792 PF00158 Sigma-54 interaction domain THEYE_A0793 PF01250 Ribosomal protein S6 THEYE_A0794 PF00436 Single-strand binding protein family THEYE_A0795 PF01084 Ribosomal protein S18 THEYE_A0799 PF01545 Cation efflux family THEYE_A0799 PF16916 Dimerisation domain of Zinc Transporter THEYE_A0801 PF01979 Amidohydrolase family THEYE_A0802 PF01258 Prokaryotic dksA/traR C4-type zinc finger THEYE_A0803 PF01467 Cytidylyltransferase-like THEYE_A0805 PF00551 Formyl transferase THEYE_A0806 PF01208 Uroporphyrinogen decarboxylase (URO-D) THEYE_A0807 PF13186 Iron-sulfur cluster-binding domain THEYE_A0807 PF04055 Radical SAM superfamily THEYE_A0808 PF00209 Sodium:neurotransmitter symporter family THEYE_A0809 PF04055 Radical SAM superfamily THEYE_A0809 PF06968 Biotin and Thiamin Synthesis associated domain THEYE_A0810 PF03744 6-carboxyhexanoate--CoA ligase THEYE_A0811 PF00781 Diacylglycerol kinase catalytic domain THEYE_A0812 PF13677 Membrane MotB of proton-channel complex MotA/MotB THEYE_A0812 PF00691 OmpA family THEYE_A0813 PF01618 MotA/TolQ/ExbB proton channel family THEYE_A0815 PF13677 Membrane MotB of proton-channel complex MotA/MotB THEYE_A0815 PF00691 OmpA family THEYE_A0816 PF01618 MotA/TolQ/ExbB proton channel family THEYE_A0818 PF00886 Ribosomal protein S16 THEYE_A0820 PF01746 tRNA (Guanine-1)-methyltransferase THEYE_A0821 PF01245 Ribosomal protein L19 THEYE_A0822 PF01351 Ribonuclease HII THEYE_A0823 PF00708 Acylphosphatase THEYE_A0823 PF17788 HypF Kae1-like domain THEYE_A0823 PF07503 HypF finger THEYE_A0823 PF01300 Telomere recombination THEYE_A0825 PF07885 Ion channel THEYE_A0825 PF02254 TrkA-N domain THEYE_A0826 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) THEYE_A0826 PF02390 Putative methyltransferase THEYE_A0827 PF02684 Lipid-A-disaccharide synthetase THEYE_A0828 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THEYE_A0829 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THEYE_A0830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THEYE_A0830 PF14824 Sirohaem biosynthesis protein central THEYE_A0830 PF10414 Sirohaem synthase dimerisation region THEYE_A0835 PF13166 AAA domain THEYE_A0836 PF00665 Integrase core domain THEYE_A0836 PF13276 HTH-like domain THEYE_A0836 PF13333 Integrase core domain THEYE_A0838 PF02371 Transposase IS116/IS110/IS902 family THEYE_A0838 PF01548 Transposase THEYE_A0840 PF01435 Peptidase family M48 THEYE_A0841 PF00708 Acylphosphatase THEYE_A0844 PF13333 Integrase core domain THEYE_A0844 PF00665 Integrase core domain THEYE_A0844 PF13276 HTH-like domain THEYE_A0845 PF05496 Holliday junction DNA helicase RuvB P-loop domain THEYE_A0845 PF12002 MgsA AAA+ ATPase C terminal THEYE_A0845 PF01661 Macro domain THEYE_A0845 PF16193 AAA C-terminal domain THEYE_A0849 PF08704 tRNA methyltransferase complex GCD14 subunit THEYE_A0850 PF04055 Radical SAM superfamily THEYE_A0852 PF01048 Phosphorylase superfamily THEYE_A0855 PF02390 Putative methyltransferase THEYE_A0857 PF04055 Radical SAM superfamily THEYE_A0857 PF18693 TRAM domain THEYE_A0857 PF00919 Uncharacterized protein family UPF0004 THEYE_A0858 PF00586 AIR synthase related protein, N-terminal domain THEYE_A0858 PF02769 AIR synthase related protein, C-terminal domain THEYE_A0859 PF02190 ATP-dependent protease La (LON) substrate-binding domain THEYE_A0859 PF05362 Lon protease (S16) C-terminal proteolytic domain THEYE_A0859 PF00004 ATPase family associated with various cellular activities (AAA) THEYE_A0860 PF00483 Nucleotidyl transferase THEYE_A0862 PF00920 Dehydratase family THEYE_A0867 PF00330 Aconitase family (aconitate hydratase) THEYE_A0868 PF02130 Uncharacterized protein family UPF0054 THEYE_A0869 PF07697 7TM-HD extracellular THEYE_A0869 PF07698 7TM receptor with intracellular HD hydrolase THEYE_A0869 PF01966 HD domain THEYE_A0870 PF02562 PhoH-like protein THEYE_A0872 PF02547 Queuosine biosynthesis protein THEYE_A0873 PF08486 Stage II sporulation protein THEYE_A0875 PF02677 Epoxyqueuosine reductase QueH THEYE_A0876 PF05491 RuvB C-terminal winged helix domain THEYE_A0876 PF17864 RuvB AAA lid domain THEYE_A0876 PF05496 Holliday junction DNA helicase RuvB P-loop domain THEYE_A0877 PF01330 RuvA N terminal domain THEYE_A0877 PF07499 RuvA, C-terminal domain THEYE_A0878 PF02405 Permease MlaE THEYE_A0879 PF00005 ABC transporter THEYE_A0882 PF05494 MlaC protein THEYE_A0884 PF10458 Valyl tRNA synthetase tRNA binding arm THEYE_A0884 PF00133 tRNA synthetases class I (I, L, M and V) THEYE_A0884 PF08264 Anticodon-binding domain of tRNA THEYE_A0886 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain THEYE_A0886 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain THEYE_A0887 PF02769 AIR synthase related protein, C-terminal domain THEYE_A0887 PF00586 AIR synthase related protein, N-terminal domain THEYE_A0888 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A0888 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A0888 PF00989 PAS fold THEYE_A0889 PF02954 Bacterial regulatory protein, Fis family THEYE_A0889 PF00072 Response regulator receiver domain THEYE_A0889 PF00158 Sigma-54 interaction domain THEYE_A0893 PF13247 4Fe-4S dicluster domain THEYE_A0893 PF09163 Formate dehydrogenase N, transmembrane THEYE_A0894a PF04055 Radical SAM superfamily THEYE_A0894a PF06969 HemN C-terminal domain THEYE_A0895 PF13180 PDZ domain THEYE_A0896 PF01171 PP-loop family THEYE_A0896 PF11734 TilS substrate C-terminal domain THEYE_A0898 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THEYE_A0898 PF03466 LysR substrate binding domain THEYE_A0900 PF02416 mttA/Hcf106 family THEYE_A0901 PF00902 Sec-independent protein translocase protein (TatC) THEYE_A0903 PF06071 Protein of unknown function (DUF933) THEYE_A0903 PF01926 50S ribosome-binding GTPase THEYE_A0904 PF08447 PAS fold THEYE_A0904 PF13426 PAS domain THEYE_A0904 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEYE_A0907 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase THEYE_A0909 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II THEYE_A0909 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg THEYE_A0910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THEYE_A0911 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 THEYE_A0912 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THEYE_A0913 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THEYE_A0914 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THEYE_A0915 PF00146 NADH dehydrogenase THEYE_A0916 PF12838 4Fe-4S dicluster domain THEYE_A0917 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 THEYE_A0918 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L THEYE_A0919 PF00361 Proton-conducting membrane transporter THEYE_A0919 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THEYE_A0920 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus THEYE_A0920 PF00361 Proton-conducting membrane transporter THEYE_A0921 PF00361 Proton-conducting membrane transporter THEYE_A0922 PF13533 Biotin-lipoyl like THEYE_A0923 PF00873 AcrB/AcrD/AcrF family THEYE_A0927 PF05175 Methyltransferase small domain THEYE_A0928 PF00528 Binding-protein-dependent transport system inner membrane component THEYE_A0929 PF12911 N-terminal TM domain of oligopeptide transport permease C THEYE_A0929 PF00528 Binding-protein-dependent transport system inner membrane component THEYE_A0930 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase THEYE_A0931 PF01523 Putative modulator of DNA gyrase THEYE_A0932 PF02463 RecF/RecN/SMC N terminal domain THEYE_A0933 PF00701 Dihydrodipicolinate synthetase family THEYE_A0934 PF00881 Nitroreductase family THEYE_A0936 PF00266 Aminotransferase class-V THEYE_A0937 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THEYE_A0937 PF01842 ACT domain THEYE_A0937 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THEYE_A0938 PF00709 Adenylosuccinate synthetase THEYE_A0939 PF00156 Phosphoribosyl transferase domain THEYE_A0940 PF01925 Sulfite exporter TauE/SafE THEYE_A0942 PF03190 Protein of unknown function, DUF255 THEYE_A0943 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase THEYE_A0945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) THEYE_A0946 PF00475 Imidazoleglycerol-phosphate dehydratase THEYE_A0948 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEYE_A0948 PF00005 ABC transporter THEYE_A0953 PF04545 Sigma-70, region 4 THEYE_A0953 PF04539 Sigma-70 region 3 THEYE_A0953 PF04542 Sigma-70 region 2 THEYE_A0953 PF00140 Sigma-70 factor, region 1.2 THEYE_A0953 PF03979 Sigma-70 factor, region 1.1 THEYE_A0953 PF04546 Sigma-70, non-essential region THEYE_A0954 PF00456 Transketolase, thiamine diphosphate binding domain THEYE_A0954a PF00483 Nucleotidyl transferase THEYE_A0955 PF07075 Protein of unknown function (DUF1343) THEYE_A0956 PF07676 WD40-like Beta Propeller Repeat THEYE_A0956 PF04052 TolB amino-terminal domain THEYE_A0958 PF02472 Biopolymer transport protein ExbD/TolR THEYE_A0959 PF01618 MotA/TolQ/ExbB proton channel family THEYE_A0960 PF01435 Peptidase family M48 THEYE_A0961 PF00731 AIR carboxylase THEYE_A0966 PF07664 Ferrous iron transport protein B C terminus THEYE_A0966 PF17910 FeoB cytosolic helical domain THEYE_A0966 PF02421 Ferrous iron transport protein B THEYE_A0966 PF07670 Nucleoside recognition THEYE_A0966 PF04023 FeoA domain THEYE_A0968 PF00291 Pyridoxal-phosphate dependent enzyme THEYE_A0969 PF02511 Thymidylate synthase complementing protein THEYE_A0970 PF00475 Imidazoleglycerol-phosphate dehydratase THEYE_A0971 PF00155 Aminotransferase class I and II THEYE_A0972 PF00459 Inositol monophosphatase family THEYE_A0973 PF01545 Cation efflux family THEYE_A0973 PF16916 Dimerisation domain of Zinc Transporter THEYE_A0975 PF05970 PIF1-like helicase THEYE_A0975 PF02689 Helicase THEYE_A0977 PF01048 Phosphorylase superfamily THEYE_A0979 PF14489 QueF-like protein THEYE_A0980 PF00762 Ferrochelatase THEYE_A0981 PF02441 Flavoprotein THEYE_A0982 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase THEYE_A0982 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase THEYE_A0983 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THEYE_A0984 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II THEYE_A0984 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase THEYE_A0984 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg THEYE_A0986 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain THEYE_A0986 PF02777 Iron/manganese superoxide dismutases, C-terminal domain THEYE_A0988 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THEYE_A0989 PF00361 Proton-conducting membrane transporter THEYE_A0989 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THEYE_A0991 PF00146 NADH dehydrogenase THEYE_A0992 PF00361 Proton-conducting membrane transporter THEYE_A0993 PF00361 Proton-conducting membrane transporter THEYE_A0993 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THEYE_A0995 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THEYE_A0995 PF00374 Nickel-dependent hydrogenase THEYE_A0995 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THEYE_A0998 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain THEYE_A0998 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THEYE_A0998 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain THEYE_A1004 PF00113 Enolase, C-terminal TIM barrel domain THEYE_A1004 PF03952 Enolase, N-terminal domain THEYE_A1006 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEYE_A1006 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THEYE_A1007 PF01597 Glycine cleavage H-protein THEYE_A1008 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THEYE_A1009 PF04607 Region found in RelA / SpoT proteins THEYE_A1009 PF02824 TGS domain THEYE_A1009 PF13291 ACT domain THEYE_A1010 PF01300 Telomere recombination THEYE_A1013 PF17863 AAA lid domain THEYE_A1013 PF07726 ATPase family associated with various cellular activities (AAA) THEYE_A1014 PF02833 DHHA2 domain THEYE_A1014 PF01368 DHH family THEYE_A1015 PF02152 Dihydroneopterin aldolase THEYE_A1015 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) THEYE_A1018 PF02566 OsmC-like protein THEYE_A1019 PF01924 Hydrogenase formation hypA family THEYE_A1021 PF07516 SecA Wing and Scaffold domain THEYE_A1021 PF01043 SecA preprotein cross-linking domain THEYE_A1021 PF02810 SEC-C motif THEYE_A1021 PF07517 SecA DEAD-like domain THEYE_A1023 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEYE_A1023 PF00672 HAMP domain THEYE_A1023 PF02743 Cache domain THEYE_A1024 PF08240 Alcohol dehydrogenase GroES-like domain THEYE_A1024 PF00107 Zinc-binding dehydrogenase THEYE_A1026 PF01165 Ribosomal protein S21 THEYE_A1028 PF01807 CHC2 zinc finger THEYE_A1028 PF08275 DNA primase catalytic core, N-terminal domain THEYE_A1029 PF00140 Sigma-70 factor, region 1.2 THEYE_A1029 PF04546 Sigma-70, non-essential region THEYE_A1029 PF04542 Sigma-70 region 2 THEYE_A1029 PF04539 Sigma-70 region 3 THEYE_A1029 PF03979 Sigma-70 factor, region 1.1 THEYE_A1029 PF04545 Sigma-70, region 4 THEYE_A1032 PF00075 RNase H THEYE_A1033 PF01171 PP-loop family THEYE_A1034 PF00881 Nitroreductase family THEYE_A1035 PF00459 Inositol monophosphatase family THEYE_A1037 PF01479 S4 domain THEYE_A1037 PF00849 RNA pseudouridylate synthase THEYE_A1038 PF17760 UvrA interaction domain THEYE_A1038 PF17755 UvrA DNA-binding domain THEYE_A1041 PF07244 Surface antigen variable number repeat THEYE_A1041 PF01103 Surface antigen THEYE_A1043 PF00206 Lyase THEYE_A1043 PF14698 Argininosuccinate lyase C-terminal THEYE_A1043 PF00583 Acetyltransferase (GNAT) family THEYE_A1046 PF02541 Ppx/GppA phosphatase family THEYE_A1047 PF04073 Aminoacyl-tRNA editing domain THEYE_A1047 PF03129 Anticodon binding domain THEYE_A1047 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THEYE_A1048 PF04055 Radical SAM superfamily THEYE_A1048 PF00919 Uncharacterized protein family UPF0004 THEYE_A1049 PF00919 Uncharacterized protein family UPF0004 THEYE_A1049 PF01938 TRAM domain THEYE_A1049 PF04055 Radical SAM superfamily THEYE_A1050 PF02254 TrkA-N domain THEYE_A1050 PF00999 Sodium/hydrogen exchanger family THEYE_A1051 PF03358 NADPH-dependent FMN reductase THEYE_A1052 PF00149 Calcineurin-like phosphoesterase THEYE_A1053 PF10417 C-terminal domain of 1-Cys peroxiredoxin THEYE_A1053 PF00578 AhpC/TSA family THEYE_A1057 PF01292 Prokaryotic cytochrome b561 THEYE_A1060 PF05140 ResB-like family THEYE_A1061 PF01578 Cytochrome C assembly protein THEYE_A1062 PF00814 Glycoprotease family THEYE_A1063 PF00764 Arginosuccinate synthase THEYE_A1064 PF02481 DNA recombination-mediator protein A THEYE_A1064 PF17782 DprA winged helix domain THEYE_A1066 PF01751 Toprim domain THEYE_A1066 PF01396 Topoisomerase DNA binding C4 zinc finger THEYE_A1066 PF01131 DNA topoisomerase THEYE_A1068 PF12169 DNA polymerase III subunits gamma and tau domain III THEYE_A1069 PF02575 YbaB/EbfC DNA-binding family THEYE_A1070 PF02132 RecR protein THEYE_A1070 PF00633 Helix-hairpin-helix motif THEYE_A1070 PF13662 Toprim domain THEYE_A1071 PF13464 Domain of unknown function (DUF4115) THEYE_A1072 PF17876 Cold shock domain THEYE_A1072 PF08206 Ribonuclease B OB domain THEYE_A1072 PF00773 RNB domain THEYE_A1072 PF00575 S1 RNA binding domain THEYE_A1074 PF01078 Magnesium chelatase, subunit ChlI THEYE_A1074 PF13519 von Willebrand factor type A domain THEYE_A1074 PF17863 AAA lid domain THEYE_A1075 PF01078 Magnesium chelatase, subunit ChlI THEYE_A1075 PF17863 AAA lid domain THEYE_A1078 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system THEYE_A1080 PF00005 ABC transporter THEYE_A1081 PF01032 FecCD transport family THEYE_A1083 PF07715 TonB-dependent Receptor Plug Domain THEYE_A1083 PF00593 TonB dependent receptor THEYE_A1086 PF18389 TrmO C-terminal domain THEYE_A1086 PF01980 tRNA-methyltransferase O THEYE_A1088 PF18019 HD domain THEYE_A1088 PF00270 DEAD/DEAH box helicase THEYE_A1088 PF18395 Cas3 C-terminal domain THEYE_A1101 PF01867 CRISPR associated protein Cas1 THEYE_A1102a PF09827 CRISPR associated protein Cas2 THEYE_A1106 PF17757 UvrB interaction domain THEYE_A1106 PF03461 TRCF domain THEYE_A1106 PF00271 Helicase conserved C-terminal domain THEYE_A1106 PF00270 DEAD/DEAH box helicase THEYE_A1106 PF02559 CarD-like/TRCF domain THEYE_A1108 PF03023 Lipid II flippase MurJ THEYE_A1109 PF00753 Metallo-beta-lactamase superfamily THEYE_A1111 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A1111 PF00989 PAS fold THEYE_A1111 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1112 PF02954 Bacterial regulatory protein, Fis family THEYE_A1112 PF00158 Sigma-54 interaction domain THEYE_A1112 PF00072 Response regulator receiver domain THEYE_A1113 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEYE_A1113 PF12729 Four helix bundle sensory module for signal transduction THEYE_A1113 PF00672 HAMP domain THEYE_A1114 PF00361 Proton-conducting membrane transporter THEYE_A1115 PF00361 Proton-conducting membrane transporter THEYE_A1116 PF00361 Proton-conducting membrane transporter THEYE_A1118 PF00361 Proton-conducting membrane transporter THEYE_A1119 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L THEYE_A1120 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 THEYE_A1121 PF00146 NADH dehydrogenase THEYE_A1122 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THEYE_A1123 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 THEYE_A1124 PF12838 4Fe-4S dicluster domain THEYE_A1125 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THEYE_A1126 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THEYE_A1127 PF12800 4Fe-4S binding domain THEYE_A1127 PF13247 4Fe-4S dicluster domain THEYE_A1128 PF01568 Molydopterin dinucleotide binding domain THEYE_A1128 PF04879 Molybdopterin oxidoreductase Fe4S4 domain THEYE_A1128 PF00384 Molybdopterin oxidoreductase THEYE_A1131 PF00582 Universal stress protein family THEYE_A1132 PF00330 Aconitase family (aconitate hydratase) THEYE_A1133 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THEYE_A1133 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THEYE_A1134 PF01678 Diaminopimelate epimerase THEYE_A1137 PF12705 PD-(D/E)XK nuclease superfamily THEYE_A1137 PF00580 UvrD/REP helicase N-terminal domain THEYE_A1137 PF13361 UvrD-like helicase C-terminal domain THEYE_A1138 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain THEYE_A1138 PF00391 PEP-utilising enzyme, mobile domain THEYE_A1138 PF02896 PEP-utilising enzyme, TIM barrel domain THEYE_A1139 PF10672 S-adenosylmethionine-dependent methyltransferase THEYE_A1139 PF17785 PUA-like domain THEYE_A1140 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component THEYE_A1141 PF01869 BadF/BadG/BcrA/BcrD ATPase family THEYE_A1144 PF00121 Triosephosphate isomerase THEYE_A1145 PF03840 Preprotein translocase SecG subunit THEYE_A1146 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEYE_A1148 PF04166 Pyridoxal phosphate biosynthetic protein PdxA THEYE_A1149 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEYE_A1149 PF00724 NADH:flavin oxidoreductase / NADH oxidase family THEYE_A1150 PF01425 Amidase THEYE_A1151 PF02934 GatB/GatE catalytic domain THEYE_A1151 PF02637 GatB domain THEYE_A1153 PF01063 Amino-transferase class IV THEYE_A1155 PF03916 Polysulphide reductase, NrfD THEYE_A1156 PF13247 4Fe-4S dicluster domain THEYE_A1156 PF00037 4Fe-4S binding domain THEYE_A1157 PF01568 Molydopterin dinucleotide binding domain THEYE_A1157 PF00384 Molybdopterin oxidoreductase THEYE_A1157 PF04879 Molybdopterin oxidoreductase Fe4S4 domain THEYE_A1158 PF00355 Rieske [2Fe-2S] domain THEYE_A1159 PF00033 Cytochrome b/b6/petB THEYE_A1161 PF03441 FAD binding domain of DNA photolyase THEYE_A1161 PF00875 DNA photolyase THEYE_A1163 PF02535 ZIP Zinc transporter THEYE_A1164 PF03358 NADPH-dependent FMN reductase THEYE_A1168 PF00581 Rhodanese-like domain THEYE_A1168 PF17773 UPF0176 acylphosphatase like domain THEYE_A1173 PF01497 Periplasmic binding protein THEYE_A1174 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase THEYE_A1175 PF00155 Aminotransferase class I and II THEYE_A1176 PF03186 CobD/Cbib protein THEYE_A1177 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THEYE_A1177 PF07685 CobB/CobQ-like glutamine amidotransferase domain THEYE_A1178 PF02654 Cobalamin-5-phosphate synthase THEYE_A1179 PF02277 Phosphoribosyltransferase THEYE_A1182 PF00593 TonB dependent receptor THEYE_A1182 PF07715 TonB-dependent Receptor Plug Domain THEYE_A1184 PF01934 Protein of unknown function DUF86 THEYE_A1186 PF04002 RadC-like JAB domain THEYE_A1189 PF01555 DNA methylase THEYE_A1193 PF01668 SmpB protein THEYE_A1196 PF00156 Phosphoribosyl transferase domain THEYE_A1197 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain THEYE_A1197 PF02896 PEP-utilising enzyme, TIM barrel domain THEYE_A1197 PF00391 PEP-utilising enzyme, mobile domain THEYE_A1198 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain THEYE_A1198 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THEYE_A1199 PF01910 Thiamine-binding protein THEYE_A1200 PF00582 Universal stress protein family THEYE_A1202 PF00994 Probable molybdopterin binding domain THEYE_A1203 PF02683 Cytochrome C biogenesis protein transmembrane region THEYE_A1204 PF00133 tRNA synthetases class I (I, L, M and V) THEYE_A1204 PF08264 Anticodon-binding domain of tRNA THEYE_A1204 PF09334 tRNA synthetases class I (M) THEYE_A1204 PF13603 Leucyl-tRNA synthetase, Domain 2 THEYE_A1210 PF06144 DNA polymerase III, delta subunit THEYE_A1213 PF01979 Amidohydrolase family THEYE_A1214 PF01040 UbiA prenyltransferase family THEYE_A1217 PF00665 Integrase core domain THEYE_A1217 PF13276 HTH-like domain THEYE_A1217 PF13333 Integrase core domain THEYE_A1221 PF13145 PPIC-type PPIASE domain THEYE_A1223 PF01926 50S ribosome-binding GTPase THEYE_A1223 PF10396 GTP-binding protein TrmE N-terminus THEYE_A1223 PF12631 MnmE helical domain THEYE_A1224 PF14849 YidC periplasmic domain THEYE_A1224 PF02096 60Kd inner membrane protein THEYE_A1225 PF01809 Putative membrane protein insertion efficiency factor THEYE_A1226 PF00468 Ribosomal protein L34 THEYE_A1227 PF01632 Ribosomal protein L35 THEYE_A1228 PF05198 Translation initiation factor IF-3, N-terminal domain THEYE_A1228 PF00707 Translation initiation factor IF-3, C-terminal domain THEYE_A1229 PF03129 Anticodon binding domain THEYE_A1229 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THEYE_A1229 PF02824 TGS domain THEYE_A1229 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THEYE_A1230 PF00005 ABC transporter THEYE_A1232 PF02687 FtsX-like permease family THEYE_A1232 PF12704 MacB-like periplasmic core domain THEYE_A1233 PF01336 OB-fold nucleic acid binding domain THEYE_A1233 PF00152 tRNA synthetases class II (D, K and N) THEYE_A1236 PF00216 Bacterial DNA-binding protein THEYE_A1237 PF00156 Phosphoribosyl transferase domain THEYE_A1238 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THEYE_A1238 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THEYE_A1239 PF01979 Amidohydrolase family THEYE_A1240 PF00117 Glutamine amidotransferase class-I THEYE_A1240 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain THEYE_A1242 PF02142 MGS-like domain THEYE_A1242 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain THEYE_A1242 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THEYE_A1243 PF02142 MGS-like domain THEYE_A1243 PF01808 AICARFT/IMPCHase bienzyme THEYE_A1245 PF02843 Phosphoribosylglycinamide synthetase, C domain THEYE_A1245 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain THEYE_A1245 PF02844 Phosphoribosylglycinamide synthetase, N domain THEYE_A1247 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1247 PF13426 PAS domain THEYE_A1247 PF00072 Response regulator receiver domain THEYE_A1249 PF01061 ABC-2 type transporter THEYE_A1250 PF00005 ABC transporter THEYE_A1252 PF01967 MoaC family THEYE_A1253 PF00106 short chain dehydrogenase THEYE_A1254 PF07690 Major Facilitator Superfamily THEYE_A1255 PF01649 Ribosomal protein S20 THEYE_A1256 PF02621 Menaquinone biosynthesis THEYE_A1257 PF00343 Carbohydrate phosphorylase THEYE_A1257 PF11897 Protein of unknown function (DUF3417) THEYE_A1258 PF06750 Bacterial Peptidase A24 N-terminal domain THEYE_A1258 PF01478 Type IV leader peptidase family THEYE_A1260 PF01026 TatD related DNase THEYE_A1261 PF01676 Metalloenzyme superfamily THEYE_A1261 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase THEYE_A1263 PF03631 Virulence factor BrkB THEYE_A1264 PF08543 Phosphomethylpyrimidine kinase THEYE_A1265 PF01259 SAICAR synthetase THEYE_A1266 PF01261 Xylose isomerase-like TIM barrel THEYE_A1272 PF16363 GDP-mannose 4,6 dehydratase THEYE_A1275 PF00205 Thiamine pyrophosphate enzyme, central domain THEYE_A1275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THEYE_A1275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THEYE_A1276 PF10369 Small subunit of acetolactate synthase THEYE_A1276 PF01842 ACT domain THEYE_A1277 PF00682 HMGL-like THEYE_A1278 PF00180 Isocitrate/isopropylmalate dehydrogenase THEYE_A1278 PF18324 Hypothetical protein TT1725 THEYE_A1279 PF00571 CBS domain THEYE_A1279 PF03471 Transporter associated domain THEYE_A1279 PF01595 Cyclin M transmembrane N-terminal domain THEYE_A1280 PF03916 Polysulphide reductase, NrfD THEYE_A1281 PF13247 4Fe-4S dicluster domain THEYE_A1284 PF02754 Cysteine-rich domain THEYE_A1288 PF13186 Iron-sulfur cluster-binding domain THEYE_A1288 PF04055 Radical SAM superfamily THEYE_A1291 PF07664 Ferrous iron transport protein B C terminus THEYE_A1291 PF17910 FeoB cytosolic helical domain THEYE_A1291 PF02421 Ferrous iron transport protein B THEYE_A1291 PF07670 Nucleoside recognition THEYE_A1291 PF04023 FeoA domain THEYE_A1292 PF01926 50S ribosome-binding GTPase THEYE_A1292 PF13167 GTP-binding GTPase N-terminal THEYE_A1292 PF16360 GTP-binding GTPase Middle Region THEYE_A1293 PF01871 AMMECR1 THEYE_A1296 PF17969 L,D-transpeptidase C-terminal domain THEYE_A1296 PF01476 LysM domain THEYE_A1296 PF03734 L,D-transpeptidase catalytic domain THEYE_A1298 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THEYE_A1298 PF01872 RibD C-terminal domain THEYE_A1299 PF04079 Segregation and condensation complex subunit ScpB THEYE_A1300 PF01476 LysM domain THEYE_A1300 PF00877 NlpC/P60 family THEYE_A1301 PF12728 Helix-turn-helix domain THEYE_A1301 PF12727 PBP superfamily domain THEYE_A1303 PF03150 Di-haem cytochrome c peroxidase THEYE_A1307 PF01654 Cytochrome bd terminal oxidase subunit I THEYE_A1308 PF02322 Cytochrome bd terminal oxidase subunit II THEYE_A1309 PF02082 Transcriptional regulator THEYE_A1312 PF10996 Beta-Casp domain THEYE_A1312 PF00753 Metallo-beta-lactamase superfamily THEYE_A1312 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain THEYE_A1313 PF00266 Aminotransferase class-V THEYE_A1316 PF12327 FtsZ family, C-terminal domain THEYE_A1316 PF00091 Tubulin/FtsZ family, GTPase domain THEYE_A1317 PF02491 SHS2 domain inserted in FTSA THEYE_A1319 PF01820 D-ala D-ala ligase N-terminus THEYE_A1319 PF07478 D-ala D-ala ligase C-terminus THEYE_A1320 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain THEYE_A1320 PF01565 FAD binding domain THEYE_A1321 PF01225 Mur ligase family, catalytic domain THEYE_A1321 PF02875 Mur ligase family, glutamate ligase domain THEYE_A1321 PF08245 Mur ligase middle domain THEYE_A1322 PF03033 Glycosyltransferase family 28 N-terminal domain THEYE_A1322 PF04101 Glycosyltransferase family 28 C-terminal domain THEYE_A1323 PF01098 Cell cycle protein THEYE_A1324 PF02875 Mur ligase family, glutamate ligase domain THEYE_A1324 PF08245 Mur ligase middle domain THEYE_A1326 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 THEYE_A1326 PF00953 Glycosyl transferase family 4 THEYE_A1327 PF08245 Mur ligase middle domain THEYE_A1327 PF02875 Mur ligase family, glutamate ligase domain THEYE_A1327 PF01225 Mur ligase family, catalytic domain THEYE_A1328 PF01225 Mur ligase family, catalytic domain THEYE_A1328 PF02875 Mur ligase family, glutamate ligase domain THEYE_A1328 PF08245 Mur ligase middle domain THEYE_A1329 PF03793 PASTA domain THEYE_A1329 PF00905 Penicillin binding protein transpeptidase domain THEYE_A1329 PF03717 Penicillin-binding Protein dimerisation domain THEYE_A1331 PF01795 MraW methylase family THEYE_A1332 PF02381 MraZ protein, putative antitoxin-like THEYE_A1333 PF00155 Aminotransferase class I and II THEYE_A1334 PF00933 Glycosyl hydrolase family 3 N terminal domain THEYE_A1334 PF01915 Glycosyl hydrolase family 3 C-terminal domain THEYE_A1335 PF07690 Major Facilitator Superfamily THEYE_A1336 PF09719 Putative redox-active protein (C_GCAxxG_C_C) THEYE_A1337 PF00072 Response regulator receiver domain THEYE_A1337 PF00486 Transcriptional regulatory protein, C terminal THEYE_A1338 PF00072 Response regulator receiver domain THEYE_A1339 PF00672 HAMP domain THEYE_A1339 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1339 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A1339 PF00072 Response regulator receiver domain THEYE_A1339 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THEYE_A1339 PF01627 Hpt domain THEYE_A1341 PF13277 YmdB-like protein THEYE_A1342 PF00013 KH domain THEYE_A1342 PF01966 HD domain THEYE_A1342 PF12072 Domain of unknown function (DUF3552) THEYE_A1344 PF03104 DNA polymerase family B, exonuclease domain THEYE_A1344 PF00136 DNA polymerase family B THEYE_A1346 PF04998 RNA polymerase Rpb1, domain 5 THEYE_A1346 PF05000 RNA polymerase Rpb1, domain 4 THEYE_A1346 PF04983 RNA polymerase Rpb1, domain 3 THEYE_A1346 PF00623 RNA polymerase Rpb1, domain 2 THEYE_A1346 PF04997 RNA polymerase Rpb1, domain 1 THEYE_A1347 PF04563 RNA polymerase beta subunit THEYE_A1347 PF04565 RNA polymerase Rpb2, domain 3 THEYE_A1347 PF00562 RNA polymerase Rpb2, domain 6 THEYE_A1347 PF04560 RNA polymerase Rpb2, domain 7 THEYE_A1347 PF04561 RNA polymerase Rpb2, domain 2 THEYE_A1347 PF10385 RNA polymerase beta subunit external 1 domain THEYE_A1348 PF16320 Ribosomal protein L7/L12 dimerisation domain THEYE_A1348 PF00542 Ribosomal protein L7/L12 C-terminal domain THEYE_A1349 PF00466 Ribosomal protein L10 THEYE_A1350 PF00687 Ribosomal protein L1p/L10e family THEYE_A1351 PF00298 Ribosomal protein L11, RNA binding domain THEYE_A1351 PF03946 Ribosomal protein L11, N-terminal domain THEYE_A1352 PF00467 KOW motif THEYE_A1352 PF02357 Transcription termination factor nusG THEYE_A1355 PF03143 Elongation factor Tu C-terminal domain THEYE_A1355 PF03144 Elongation factor Tu domain 2 THEYE_A1355 PF00009 Elongation factor Tu GTP binding domain THEYE_A1366 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THEYE_A1373 PF00672 HAMP domain THEYE_A1373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1374 PF00582 Universal stress protein family THEYE_A1375 PF16363 GDP-mannose 4,6 dehydratase THEYE_A1376 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal THEYE_A1376 PF01926 50S ribosome-binding GTPase THEYE_A1377 PF00158 Sigma-54 interaction domain THEYE_A1377 PF00072 Response regulator receiver domain THEYE_A1377 PF02954 Bacterial regulatory protein, Fis family THEYE_A1378 PF00672 HAMP domain THEYE_A1378 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1378 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A1378 PF00989 PAS fold THEYE_A1381 PF01925 Sulfite exporter TauE/SafE THEYE_A1384 PF01177 Asp/Glu/Hydantoin racemase THEYE_A1385 PF01138 3' exoribonuclease family, domain 1 THEYE_A1385 PF03725 3' exoribonuclease family, domain 2 THEYE_A1386 PF02502 Ribose/Galactose Isomerase THEYE_A1387 PF00464 Serine hydroxymethyltransferase THEYE_A1388 PF14437 MafB19-like deaminase THEYE_A1389 PF02492 CobW/HypB/UreG, nucleotide-binding domain THEYE_A1390 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA THEYE_A1393 PF01066 CDP-alcohol phosphatidyltransferase THEYE_A1394 PF01658 Myo-inositol-1-phosphate synthase THEYE_A1395 PF02899 Phage integrase, N-terminal SAM-like domain THEYE_A1395 PF00589 Phage integrase family THEYE_A1396 PF00227 Proteasome subunit THEYE_A1397 PF00004 ATPase family associated with various cellular activities (AAA) THEYE_A1397 PF07724 AAA domain (Cdc48 subfamily) THEYE_A1398 PF03330 Lytic transglycolase THEYE_A1398 PF05036 Sporulation related domain THEYE_A1400 PF05958 tRNA (Uracil-5-)-methyltransferase THEYE_A1400 PF01938 TRAM domain THEYE_A1402 PF00486 Transcriptional regulatory protein, C terminal THEYE_A1402 PF00072 Response regulator receiver domain THEYE_A1403 PF00672 HAMP domain THEYE_A1403 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A1403 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1405 PF02321 Outer membrane efflux protein THEYE_A1407 PF12704 MacB-like periplasmic core domain THEYE_A1407 PF02687 FtsX-like permease family THEYE_A1407 PF00005 ABC transporter THEYE_A1408 PF12704 MacB-like periplasmic core domain THEYE_A1408 PF02687 FtsX-like permease family THEYE_A1408 PF00005 ABC transporter THEYE_A1415 PF00403 Heavy-metal-associated domain THEYE_A1416 PF03484 tRNA synthetase B5 domain THEYE_A1416 PF03147 Ferredoxin-fold anticodon binding domain THEYE_A1416 PF01588 Putative tRNA binding domain THEYE_A1416 PF03483 B3/4 domain THEYE_A1416 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain THEYE_A1417 PF01409 tRNA synthetases class II core domain (F) THEYE_A1417 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain THEYE_A1418 PF00453 Ribosomal protein L20 THEYE_A1420 PF01196 Ribosomal protein L17 THEYE_A1421 PF01000 RNA polymerase Rpb3/RpoA insert domain THEYE_A1421 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain THEYE_A1421 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain THEYE_A1422 PF01479 S4 domain THEYE_A1422 PF00163 Ribosomal protein S4/S9 N-terminal domain THEYE_A1423 PF00411 Ribosomal protein S11 THEYE_A1424 PF00416 Ribosomal protein S13/S18 THEYE_A1425 PF01176 Translation initiation factor 1A / IF-1 THEYE_A1426 PF00557 Metallopeptidase family M24 THEYE_A1427 PF00344 SecY translocase THEYE_A1428 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A THEYE_A1429 PF00333 Ribosomal protein S5, N-terminal domain THEYE_A1429 PF03719 Ribosomal protein S5, C-terminal domain THEYE_A1430 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast THEYE_A1431 PF00347 Ribosomal protein L6 THEYE_A1432 PF00410 Ribosomal protein S8 THEYE_A1433 PF00253 Ribosomal protein S14p/S29e THEYE_A1434 PF00281 Ribosomal protein L5 THEYE_A1434 PF00673 ribosomal L5P family C-terminus THEYE_A1435 PF00467 KOW motif THEYE_A1435 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 THEYE_A1436 PF00238 Ribosomal protein L14p/L23e THEYE_A1437 PF00366 Ribosomal protein S17 THEYE_A1438 PF00831 Ribosomal L29 protein THEYE_A1439 PF00252 Ribosomal protein L16p/L10e THEYE_A1440 PF00189 Ribosomal protein S3, C-terminal domain THEYE_A1440 PF07650 KH domain THEYE_A1441 PF00237 Ribosomal protein L22p/L17e THEYE_A1442 PF00203 Ribosomal protein S19 THEYE_A1443 PF00181 Ribosomal Proteins L2, RNA binding domain THEYE_A1443 PF03947 Ribosomal Proteins L2, C-terminal domain THEYE_A1444 PF00276 Ribosomal protein L23 THEYE_A1445 PF00573 Ribosomal protein L4/L1 family THEYE_A1446 PF00297 Ribosomal protein L3 THEYE_A1447 PF00338 Ribosomal protein S10p/S20e THEYE_A1448 PF03144 Elongation factor Tu domain 2 THEYE_A1448 PF03143 Elongation factor Tu C-terminal domain THEYE_A1448 PF00009 Elongation factor Tu GTP binding domain THEYE_A1449 PF03764 Elongation factor G, domain IV THEYE_A1449 PF00009 Elongation factor Tu GTP binding domain THEYE_A1449 PF00679 Elongation factor G C-terminus THEYE_A1449 PF14492 Elongation Factor G, domain II THEYE_A1449 PF03144 Elongation factor Tu domain 2 THEYE_A1450 PF00177 Ribosomal protein S7p/S5e THEYE_A1451 PF00164 Ribosomal protein S12/S23 THEYE_A1453 PF01195 Peptidyl-tRNA hydrolase THEYE_A1454 PF14693 Ribosomal protein TL5, C-terminal domain THEYE_A1454 PF01386 Ribosomal L25p family THEYE_A1455 PF14572 Phosphoribosyl synthetase-associated domain THEYE_A1455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase THEYE_A1457 PF08544 GHMP kinases C terminal THEYE_A1457 PF00288 GHMP kinases N terminal domain THEYE_A1461 PF17755 UvrA DNA-binding domain THEYE_A1461 PF00005 ABC transporter THEYE_A1461 PF17760 UvrA interaction domain THEYE_A1463 PF01594 AI-2E family transporter THEYE_A1464 PF07722 Peptidase C26 THEYE_A1465 PF07969 Amidohydrolase family THEYE_A1466 PF07969 Amidohydrolase family THEYE_A1467 PF01520 N-acetylmuramoyl-L-alanine amidase THEYE_A1467 PF11741 AMIN domain THEYE_A1468 PF01106 NifU-like domain THEYE_A1470 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit THEYE_A1470 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain THEYE_A1471 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit THEYE_A1471 PF04060 Putative Fe-S cluster THEYE_A1472 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit THEYE_A1473 PF00809 Pterin binding enzyme THEYE_A1474 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEYE_A1474 PF08447 PAS fold THEYE_A1474 PF13426 PAS domain THEYE_A1475 PF16200 C-terminal region of band_7 THEYE_A1475 PF01145 SPFH domain / Band 7 family THEYE_A1477 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal THEYE_A1477 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III THEYE_A1478 PF02504 Fatty acid synthesis protein THEYE_A1479 PF01783 Ribosomal L32p protein family THEYE_A1480 PF02620 Large ribosomal RNA subunit accumulation protein YceD THEYE_A1481 PF13180 PDZ domain THEYE_A1481 PF03572 Peptidase family S41 THEYE_A1482 PF01476 LysM domain THEYE_A1482 PF01551 Peptidase family M23 THEYE_A1483 PF02687 FtsX-like permease family THEYE_A1483 PF18075 FtsX extracellular domain THEYE_A1484 PF00005 ABC transporter THEYE_A1485 PF02780 Transketolase, C-terminal domain THEYE_A1485 PF02779 Transketolase, pyrimidine binding domain THEYE_A1486 PF00456 Transketolase, thiamine diphosphate binding domain THEYE_A1487 PF00476 DNA polymerase family A THEYE_A1487 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain THEYE_A1487 PF01367 5'-3' exonuclease, C-terminal SAM fold THEYE_A1488 PF05193 Peptidase M16 inactive domain THEYE_A1488 PF00675 Insulinase (Peptidase family M16) THEYE_A1489 PF05193 Peptidase M16 inactive domain THEYE_A1489 PF00675 Insulinase (Peptidase family M16) THEYE_A1490 PF00486 Transcriptional regulatory protein, C terminal THEYE_A1490 PF00072 Response regulator receiver domain THEYE_A1491 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1491 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A1491 PF00989 PAS fold THEYE_A1491 PF13188 PAS domain THEYE_A1491 PF13426 PAS domain THEYE_A1492 PF00534 Glycosyl transferases group 1 THEYE_A1492 PF08323 Starch synthase catalytic domain THEYE_A1494 PF00753 Metallo-beta-lactamase superfamily THEYE_A1494 PF12706 Beta-lactamase superfamily domain THEYE_A1495 PF00989 PAS fold THEYE_A1495 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A1495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1496 PF00072 Response regulator receiver domain THEYE_A1496 PF00158 Sigma-54 interaction domain THEYE_A1496 PF02954 Bacterial regulatory protein, Fis family THEYE_A1499 PF01975 Survival protein SurE THEYE_A1500 PF00348 Polyprenyl synthetase THEYE_A1501 PF01008 Initiation factor 2 subunit family THEYE_A1502 PF07963 Prokaryotic N-terminal methylation motif THEYE_A1502 PF00114 Pilin (bacterial filament) THEYE_A1506 PF11823 Protein of unknown function (DUF3343) THEYE_A1506 PF01206 Sulfurtransferase TusA THEYE_A1509 PF02561 Flagellar protein FliS THEYE_A1510 PF02465 Flagellar hook-associated protein 2 N-terminus THEYE_A1510 PF07195 Flagellar hook-associated protein 2 C-terminus THEYE_A1510 PF07196 Flagellin hook IN motif THEYE_A1512 PF00700 Bacterial flagellin C-terminal helical region THEYE_A1512 PF00669 Bacterial flagellin N-terminal helical region THEYE_A1513 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THEYE_A1515 PF00483 Nucleotidyl transferase THEYE_A1516 PF16363 GDP-mannose 4,6 dehydratase THEYE_A1518 PF01370 NAD dependent epimerase/dehydratase family THEYE_A1519 PF00456 Transketolase, thiamine diphosphate binding domain THEYE_A1520 PF02779 Transketolase, pyrimidine binding domain THEYE_A1520 PF02780 Transketolase, C-terminal domain THEYE_A1522 PF00696 Amino acid kinase family THEYE_A1522 PF13840 ACT domain THEYE_A1522 PF01842 ACT domain THEYE_A1523 PF01960 ArgJ family THEYE_A1524 PF02617 ATP-dependent Clp protease adaptor protein ClpS THEYE_A1525 PF02861 Clp amino terminal domain, pathogenicity island component THEYE_A1525 PF07724 AAA domain (Cdc48 subfamily) THEYE_A1525 PF17871 AAA lid domain THEYE_A1525 PF10431 C-terminal, D2-small domain, of ClpB protein THEYE_A1525 PF00004 ATPase family associated with various cellular activities (AAA) THEYE_A1526 PF03588 Leucyl/phenylalanyl-tRNA protein transferase THEYE_A1529 PF00137 ATP synthase subunit C THEYE_A1530 PF00119 ATP synthase A chain THEYE_A1532 PF04055 Radical SAM superfamily THEYE_A1533 PF05496 Holliday junction DNA helicase RuvB P-loop domain THEYE_A1533 PF12002 MgsA AAA+ ATPase C terminal THEYE_A1533 PF16193 AAA C-terminal domain THEYE_A1534 PF01966 HD domain THEYE_A1534 PF00072 Response regulator receiver domain THEYE_A1535 PF02578 Multi-copper polyphenol oxidoreductase laccase THEYE_A1537 PF00793 DAHP synthetase I family THEYE_A1537 PF18152 DAHP synthase ferredoxin-like domain THEYE_A1538 PF04193 PQ loop repeat THEYE_A1540 PF00990 Diguanylate cyclase, GGDEF domain THEYE_A1540 PF17158 Membrane-associated sensor, integral membrane domain THEYE_A1541 PF00318 Ribosomal protein S2 THEYE_A1542 PF00889 Elongation factor TS THEYE_A1543 PF00696 Amino acid kinase family THEYE_A1544 PF01765 Ribosome recycling factor THEYE_A1545 PF01258 Prokaryotic dksA/traR C4-type zinc finger THEYE_A1546 PF01416 tRNA pseudouridine synthase THEYE_A1548 PF01075 Glycosyltransferase family 9 (heptosyltransferase) THEYE_A1549 PF13439 Glycosyltransferase Family 4 THEYE_A1549 PF00534 Glycosyl transferases group 1 THEYE_A1550 PF01522 Polysaccharide deacetylase THEYE_A1552 PF01743 Poly A polymerase head domain THEYE_A1552 PF02272 DHHA1 domain THEYE_A1552 PF01368 DHH family THEYE_A1552 PF12627 Probable RNA and SrmB- binding site of polymerase A THEYE_A1552 PF00571 CBS domain THEYE_A1554 PF01548 Transposase THEYE_A1554 PF02371 Transposase IS116/IS110/IS902 family THEYE_A1557 PF18073 Rubredoxin metal binding domain THEYE_A1559 PF00398 Ribosomal RNA adenine dimethylase THEYE_A1563 PF01584 CheW-like domain THEYE_A1565 PF00440 Bacterial regulatory proteins, tetR family THEYE_A1566 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THEYE_A1566 PF00529 HlyD membrane-fusion protein of T1SS THEYE_A1567 PF00873 AcrB/AcrD/AcrF family THEYE_A1568 PF02321 Outer membrane efflux protein THEYE_A1572 PF00005 ABC transporter THEYE_A1575 PF00005 ABC transporter THEYE_A1576 PF13533 Biotin-lipoyl like THEYE_A1577 PF09350 Domain of unknown function (DUF1992) THEYE_A1580 PF02774 Semialdehyde dehydrogenase, dimerisation domain THEYE_A1580 PF01118 Semialdehyde dehydrogenase, NAD binding domain THEYE_A1581 PF00380 Ribosomal protein S9/S16 THEYE_A1582 PF00572 Ribosomal protein L13 THEYE_A1583 PF00753 Metallo-beta-lactamase superfamily THEYE_A1584 PF01012 Electron transfer flavoprotein domain THEYE_A1585 PF00766 Electron transfer flavoprotein FAD-binding domain THEYE_A1585 PF01012 Electron transfer flavoprotein domain THEYE_A1585 PF13237 4Fe-4S dicluster domain THEYE_A1586 PF00698 Acyl transferase domain THEYE_A1587 PF00056 lactate/malate dehydrogenase, NAD binding domain THEYE_A1587 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain THEYE_A1588 PF00334 Nucleoside diphosphate kinase THEYE_A1589 PF00293 NUDIX domain THEYE_A1590 PF02554 Carbon starvation protein CstA THEYE_A1590 PF13722 5TM C-terminal transporter carbon starvation CstA THEYE_A1591 PF00072 Response regulator receiver domain THEYE_A1591 PF04397 LytTr DNA-binding domain THEYE_A1592 PF06580 Histidine kinase THEYE_A1592 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1592 PF07694 5TMR of 5TMR-LYT THEYE_A1592 PF13492 GAF domain THEYE_A1594 PF00005 ABC transporter THEYE_A1595 PF00317 Ribonucleotide reductase, all-alpha domain THEYE_A1595 PF03477 ATP cone domain THEYE_A1595 PF02867 Ribonucleotide reductase, barrel domain THEYE_A1596 PF03884 DNA gyrase inhibitor YacG THEYE_A1597 PF01113 Dihydrodipicolinate reductase, N-terminus THEYE_A1597 PF05173 Dihydrodipicolinate reductase, C-terminus THEYE_A1599 PF00301 Rubredoxin THEYE_A1600 PF00905 Penicillin binding protein transpeptidase domain THEYE_A1600 PF00912 Transglycosylase THEYE_A1601 PF02558 Ketopantoate reductase PanE/ApbA THEYE_A1601 PF08546 Ketopantoate reductase PanE/ApbA C terminal THEYE_A1602 PF13380 CoA binding domain THEYE_A1602 PF13607 Succinyl-CoA ligase like flavodoxin domain THEYE_A1604 PF00696 Amino acid kinase family THEYE_A1605 PF04452 RNA methyltransferase THEYE_A1608 PF01494 FAD binding domain THEYE_A1609 PF00582 Universal stress protein family THEYE_A1610 PF03309 Type III pantothenate kinase THEYE_A1611 PF03099 Biotin/lipoate A/B protein ligase family THEYE_A1611 PF08279 HTH domain THEYE_A1611 PF02237 Biotin protein ligase C terminal domain THEYE_A1615 PF02371 Transposase IS116/IS110/IS902 family THEYE_A1615 PF01548 Transposase THEYE_A1617 PF00440 Bacterial regulatory proteins, tetR family THEYE_A1618 PF00529 HlyD membrane-fusion protein of T1SS THEYE_A1618 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THEYE_A1619 PF00873 AcrB/AcrD/AcrF family THEYE_A1620 PF02321 Outer membrane efflux protein THEYE_A1624 PF00005 ABC transporter THEYE_A1627 PF00005 ABC transporter THEYE_A1628 PF13533 Biotin-lipoyl like THEYE_A1629 PF09350 Domain of unknown function (DUF1992) THEYE_A1632 PF01118 Semialdehyde dehydrogenase, NAD binding domain THEYE_A1632 PF02774 Semialdehyde dehydrogenase, dimerisation domain THEYE_A1633 PF00380 Ribosomal protein S9/S16 THEYE_A1634 PF00572 Ribosomal protein L13 THEYE_A1635 PF00753 Metallo-beta-lactamase superfamily THEYE_A1636 PF01012 Electron transfer flavoprotein domain THEYE_A1637 PF01012 Electron transfer flavoprotein domain THEYE_A1637 PF00766 Electron transfer flavoprotein FAD-binding domain THEYE_A1637 PF13237 4Fe-4S dicluster domain THEYE_A1638 PF00698 Acyl transferase domain THEYE_A1639 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain THEYE_A1639 PF00056 lactate/malate dehydrogenase, NAD binding domain THEYE_A1640 PF00334 Nucleoside diphosphate kinase THEYE_A1641 PF00293 NUDIX domain THEYE_A1642 PF02554 Carbon starvation protein CstA THEYE_A1642 PF13722 5TM C-terminal transporter carbon starvation CstA THEYE_A1643 PF00072 Response regulator receiver domain THEYE_A1643 PF04397 LytTr DNA-binding domain THEYE_A1644 PF06580 Histidine kinase THEYE_A1644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1644 PF13492 GAF domain THEYE_A1644 PF07694 5TMR of 5TMR-LYT THEYE_A1646 PF00005 ABC transporter THEYE_A1647 PF03477 ATP cone domain THEYE_A1647 PF02867 Ribonucleotide reductase, barrel domain THEYE_A1647 PF00317 Ribonucleotide reductase, all-alpha domain THEYE_A1648 PF03884 DNA gyrase inhibitor YacG THEYE_A1649 PF05173 Dihydrodipicolinate reductase, C-terminus THEYE_A1649 PF01113 Dihydrodipicolinate reductase, N-terminus THEYE_A1651 PF00301 Rubredoxin THEYE_A1652 PF00905 Penicillin binding protein transpeptidase domain THEYE_A1652 PF00912 Transglycosylase THEYE_A1653 PF08546 Ketopantoate reductase PanE/ApbA C terminal THEYE_A1653 PF02558 Ketopantoate reductase PanE/ApbA THEYE_A1654 PF13607 Succinyl-CoA ligase like flavodoxin domain THEYE_A1654 PF13380 CoA binding domain THEYE_A1656 PF00696 Amino acid kinase family THEYE_A1657 PF04452 RNA methyltransferase THEYE_A1659a PF01494 FAD binding domain THEYE_A1661 PF00582 Universal stress protein family THEYE_A1662 PF03309 Type III pantothenate kinase THEYE_A1663 PF08279 HTH domain THEYE_A1663 PF02237 Biotin protein ligase C terminal domain THEYE_A1663 PF03099 Biotin/lipoate A/B protein ligase family THEYE_A1667 PF02371 Transposase IS116/IS110/IS902 family THEYE_A1667 PF01548 Transposase THEYE_A1671 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ THEYE_A1672 PF13742 OB-fold nucleic acid binding domain THEYE_A1672 PF02601 Exonuclease VII, large subunit THEYE_A1674 PF00588 SpoU rRNA Methylase family THEYE_A1675 PF13186 Iron-sulfur cluster-binding domain THEYE_A1675 PF04055 Radical SAM superfamily THEYE_A1676 PF02405 Permease MlaE THEYE_A1677 PF00005 ABC transporter THEYE_A1678 PF00291 Pyridoxal-phosphate dependent enzyme THEYE_A1679 PF02597 ThiS family THEYE_A1680 PF00005 ABC transporter THEYE_A1680 PF09383 NIL domain THEYE_A1681 PF00291 Pyridoxal-phosphate dependent enzyme THEYE_A1682 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase THEYE_A1682 PF01676 Metalloenzyme superfamily THEYE_A1683 PF09335 SNARE associated Golgi protein THEYE_A1685 PF03951 Glutamine synthetase, beta-Grasp domain THEYE_A1685 PF00120 Glutamine synthetase, catalytic domain THEYE_A1687 PF13187 4Fe-4S dicluster domain THEYE_A1687 PF01645 Conserved region in glutamate synthase THEYE_A1688 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THEYE_A1688 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEYE_A1689 PF02384 N-6 DNA Methylase THEYE_A1689 PF12161 HsdM N-terminal domain THEYE_A1692 PF01420 Type I restriction modification DNA specificity domain THEYE_A1693 PF01420 Type I restriction modification DNA specificity domain THEYE_A1697 PF08463 EcoEI R protein C-terminal THEYE_A1697 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) THEYE_A1697 PF00271 Helicase conserved C-terminal domain THEYE_A1697 PF04851 Type III restriction enzyme, res subunit THEYE_A1699 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 THEYE_A1699 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain THEYE_A1702 PF00958 GMP synthase C terminal domain THEYE_A1702 PF02540 NAD synthase THEYE_A1702 PF00117 Glutamine amidotransferase class-I THEYE_A1703 PF02954 Bacterial regulatory protein, Fis family THEYE_A1703 PF01590 GAF domain THEYE_A1703 PF00158 Sigma-54 interaction domain THEYE_A1706 PF00543 Nitrogen regulatory protein P-II THEYE_A1707 PF00909 Ammonium Transporter Family THEYE_A1709 PF08447 PAS fold THEYE_A1709 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEYE_A1709 PF13426 PAS domain THEYE_A1710 PF02579 Dinitrogenase iron-molybdenum cofactor THEYE_A1710 PF04055 Radical SAM superfamily THEYE_A1711 PF00543 Nitrogen regulatory protein P-II THEYE_A1712 PF00543 Nitrogen regulatory protein P-II THEYE_A1714 PF00148 Nitrogenase component 1 type Oxidoreductase THEYE_A1715 PF00148 Nitrogenase component 1 type Oxidoreductase THEYE_A1715 PF11844 Domain of unknown function (DUF3364) THEYE_A1716 PF00148 Nitrogenase component 1 type Oxidoreductase THEYE_A1717 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family THEYE_A1718 PF04055 Radical SAM superfamily THEYE_A1718 PF06968 Biotin and Thiamin Synthesis associated domain THEYE_A1719 PF12631 MnmE helical domain THEYE_A1719 PF01926 50S ribosome-binding GTPase THEYE_A1719 PF10396 GTP-binding protein TrmE N-terminus THEYE_A1720 PF03461 TRCF domain THEYE_A1720 PF17757 UvrB interaction domain THEYE_A1720 PF00271 Helicase conserved C-terminal domain THEYE_A1720 PF02559 CarD-like/TRCF domain THEYE_A1720 PF00270 DEAD/DEAH box helicase THEYE_A1722 PF00206 Lyase THEYE_A1722 PF10415 Fumarase C C-terminus THEYE_A1726 PF00037 4Fe-4S binding domain THEYE_A1726 PF02906 Iron only hydrogenase large subunit, C-terminal domain THEYE_A1727 PF02256 Iron hydrogenase small subunit THEYE_A1727 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THEYE_A1727 PF02906 Iron only hydrogenase large subunit, C-terminal domain THEYE_A1727 PF00037 4Fe-4S binding domain THEYE_A1728 PF00037 4Fe-4S binding domain THEYE_A1728 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THEYE_A1728 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THEYE_A1729 PF00793 DAHP synthetase I family THEYE_A1731 PF00202 Aminotransferase class-III THEYE_A1734 PF00899 ThiF family THEYE_A1735 PF00579 tRNA synthetases class I (W and Y) THEYE_A1736 PF02163 Peptidase family M50 THEYE_A1737 PF00682 HMGL-like THEYE_A1737 PF02436 Conserved carboxylase domain THEYE_A1737 PF00364 Biotin-requiring enzyme THEYE_A1738 PF02785 Biotin carboxylase C-terminal domain THEYE_A1738 PF00289 Biotin carboxylase, N-terminal domain THEYE_A1738 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THEYE_A1741 PF01471 Putative peptidoglycan binding domain THEYE_A1741 PF03572 Peptidase family S41 THEYE_A1741 PF17820 PDZ domain THEYE_A1742 PF04055 Radical SAM superfamily THEYE_A1745 PF04055 Radical SAM superfamily THEYE_A1747 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEYE_A1750 PF01139 tRNA-splicing ligase RtcB THEYE_A1752 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THEYE_A1752 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THEYE_A1752 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THEYE_A1752 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THEYE_A1753 PF13654 AAA domain THEYE_A1753 PF05362 Lon protease (S16) C-terminal proteolytic domain THEYE_A1754 PF00950 ABC 3 transport family THEYE_A1755 PF00005 ABC transporter THEYE_A1756 PF01297 Zinc-uptake complex component A periplasmic THEYE_A1756 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment THEYE_A1757 PF00684 DnaJ central domain THEYE_A1757 PF01556 DnaJ C terminal domain THEYE_A1757 PF00226 DnaJ domain THEYE_A1758 PF00012 Hsp70 protein THEYE_A1759 PF01025 GrpE THEYE_A1760 PF01628 HrcA protein C terminal domain THEYE_A1761 PF17284 Spermidine synthase tetramerisation domain THEYE_A1762 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THEYE_A1762 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THEYE_A1763 PF01817 Chorismate mutase type II THEYE_A1763 PF01842 ACT domain THEYE_A1763 PF00800 Prephenate dehydratase THEYE_A1764 PF00155 Aminotransferase class I and II THEYE_A1765 PF00793 DAHP synthetase I family THEYE_A1765 PF18152 DAHP synthase ferredoxin-like domain THEYE_A1766 PF02153 Prephenate dehydrogenase THEYE_A1766 PF01842 ACT domain THEYE_A1767 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THEYE_A1768 PF02224 Cytidylate kinase THEYE_A1769 PF02401 LytB protein THEYE_A1770 PF00575 S1 RNA binding domain THEYE_A1771 PF01343 Peptidase family S49 THEYE_A1772 PF00216 Bacterial DNA-binding protein THEYE_A1773 PF00005 ABC transporter THEYE_A1773 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEYE_A1774 PF01895 PhoU domain THEYE_A1775 PF12849 PBP superfamily domain THEYE_A1778 PF12849 PBP superfamily domain THEYE_A1779 PF01487 Type I 3-dehydroquinase THEYE_A1780 PF00486 Transcriptional regulatory protein, C terminal THEYE_A1780 PF00072 Response regulator receiver domain THEYE_A1782 PF00245 Alkaline phosphatase THEYE_A1785 PF12792 CSS motif domain associated with EAL THEYE_A1785 PF00563 EAL domain THEYE_A1788 PF00072 Response regulator receiver domain THEYE_A1788 PF09456 RcsC Alpha-Beta-Loop (ABL) THEYE_A1788 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A1788 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1789 PF00232 Glycosyl hydrolase family 1 THEYE_A1790 PF00528 Binding-protein-dependent transport system inner membrane component THEYE_A1791 PF00528 Binding-protein-dependent transport system inner membrane component THEYE_A1792 PF00005 ABC transporter THEYE_A1795 PF01467 Cytidylyltransferase-like THEYE_A1795 PF00294 pfkB family carbohydrate kinase THEYE_A1796 PF03129 Anticodon binding domain THEYE_A1796 PF13393 Histidyl-tRNA synthetase THEYE_A1797 PF05103 DivIVA protein THEYE_A1798 PF02325 YGGT family THEYE_A1799 PF14748 Pyrroline-5-carboxylate reductase dimerisation THEYE_A1799 PF03807 NADP oxidoreductase coenzyme F420-dependent THEYE_A1800 PF01168 Alanine racemase, N-terminal domain THEYE_A1801 PF00672 HAMP domain THEYE_A1801 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1801 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A1802 PF02954 Bacterial regulatory protein, Fis family THEYE_A1802 PF00072 Response regulator receiver domain THEYE_A1802 PF00158 Sigma-54 interaction domain THEYE_A1806 PF07690 Major Facilitator Superfamily THEYE_A1808 PF01384 Phosphate transporter family THEYE_A1813 PF02416 mttA/Hcf106 family THEYE_A1814 PF01569 PAP2 superfamily THEYE_A1815 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase THEYE_A1816 PF02705 K+ potassium transporter THEYE_A1817 PF00815 Histidinol dehydrogenase THEYE_A1820 PF03091 CutA1 divalent ion tolerance protein THEYE_A1821 PF08734 GYD domain THEYE_A1823 PF00216 Bacterial DNA-binding protein THEYE_A1824 PF00149 Calcineurin-like phosphoesterase THEYE_A1824 PF12320 Type 5 capsule protein repressor C-terminal domain THEYE_A1826 PF00312 Ribosomal protein S15 THEYE_A1827 PF00575 S1 RNA binding domain THEYE_A1827 PF03725 3' exoribonuclease family, domain 2 THEYE_A1827 PF01138 3' exoribonuclease family, domain 1 THEYE_A1827 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain THEYE_A1827 PF00013 KH domain THEYE_A1828 PF05193 Peptidase M16 inactive domain THEYE_A1828 PF00675 Insulinase (Peptidase family M16) THEYE_A1830 PF01593 Flavin containing amine oxidoreductase THEYE_A1831 PF00890 FAD binding domain THEYE_A1831 PF14537 Cytochrome c3 THEYE_A1832 PF00890 FAD binding domain THEYE_A1833 PF13187 4Fe-4S dicluster domain THEYE_A1833 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit THEYE_A1835 PF14306 PUA-like domain THEYE_A1835 PF01747 ATP-sulfurylase THEYE_A1836 PF05191 Adenylate kinase, active site lid THEYE_A1837 PF01725 Ham1 family THEYE_A1839 PF00448 SRP54-type protein, GTPase domain THEYE_A1839 PF02881 SRP54-type protein, helical bundle domain THEYE_A1843 PF04085 rod shape-determining protein MreC THEYE_A1845 PF00905 Penicillin binding protein transpeptidase domain THEYE_A1845 PF03717 Penicillin-binding Protein dimerisation domain THEYE_A1846 PF01098 Cell cycle protein THEYE_A1847 PF00885 6,7-dimethyl-8-ribityllumazine synthase THEYE_A1848 PF01029 NusB family THEYE_A1852 PF00175 Oxidoreductase NAD-binding domain THEYE_A1852 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B THEYE_A1853 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THEYE_A1853 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal THEYE_A1854 PF00374 Nickel-dependent hydrogenase THEYE_A1858 PF13649 Methyltransferase domain THEYE_A1860 PF10609 NUBPL iron-transfer P-loop NTPase THEYE_A1865 PF01475 Ferric uptake regulator family THEYE_A1866 PF01925 Sulfite exporter TauE/SafE THEYE_A1868 PF01709 Transcriptional regulator THEYE_A1870 PF00132 Bacterial transferase hexapeptide (six repeats) THEYE_A1870 PF12804 MobA-like NTP transferase domain THEYE_A1871 PF01380 SIS domain THEYE_A1872 PF00580 UvrD/REP helicase N-terminal domain THEYE_A1872 PF13361 UvrD-like helicase C-terminal domain THEYE_A1873 PF02686 Glu-tRNAGln amidotransferase C subunit THEYE_A1874 PF02261 Aspartate decarboxylase THEYE_A1877 PF13419 Haloacid dehalogenase-like hydrolase THEYE_A1883 PF00830 Ribosomal L28 family THEYE_A1884 PF11987 Translation-initiation factor 2 THEYE_A1884 PF04760 Translation initiation factor IF-2, N-terminal region THEYE_A1884 PF00009 Elongation factor Tu GTP binding domain THEYE_A1885 PF02033 Ribosome-binding factor A THEYE_A1887 PF13614 AAA domain THEYE_A1889 PF08459 UvrC Helix-hairpin-helix N-terminal THEYE_A1889 PF02151 UvrB/uvrC motif THEYE_A1889 PF01541 GIY-YIG catalytic domain THEYE_A1889 PF12826 Helix-hairpin-helix motif THEYE_A1890 PF00211 Adenylate and Guanylate cyclase catalytic domain THEYE_A1894 PF00005 ABC transporter THEYE_A1896 PF11992 Domain of unknown function (DUF3488) THEYE_A1896 PF01841 Transglutaminase-like superfamily THEYE_A1896 PF13559 Domain of unknown function (DUF4129) THEYE_A1917 PF00027 Cyclic nucleotide-binding domain THEYE_A1917 PF13545 Crp-like helix-turn-helix domain THEYE_A1920 PF01891 Cobalt uptake substrate-specific transmembrane region THEYE_A1922 PF02361 Cobalt transport protein THEYE_A1923 PF00005 ABC transporter THEYE_A1924 PF02881 SRP54-type protein, helical bundle domain THEYE_A1924 PF00448 SRP54-type protein, GTPase domain THEYE_A1924 PF02978 Signal peptide binding domain THEYE_A1925 PF00578 AhpC/TSA family THEYE_A1926 PF00085 Thioredoxin THEYE_A1927 PF00011 Hsp20/alpha crystallin family THEYE_A1928 PF17871 AAA lid domain THEYE_A1928 PF02861 Clp amino terminal domain, pathogenicity island component THEYE_A1928 PF10431 C-terminal, D2-small domain, of ClpB protein THEYE_A1928 PF00004 ATPase family associated with various cellular activities (AAA) THEYE_A1928 PF07724 AAA domain (Cdc48 subfamily) THEYE_A1930 PF00226 DnaJ domain THEYE_A1930 PF01556 DnaJ C terminal domain THEYE_A1930 PF00684 DnaJ central domain THEYE_A1932 PF00156 Phosphoribosyl transferase domain THEYE_A1934 PF00990 Diguanylate cyclase, GGDEF domain THEYE_A1936 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family THEYE_A1937 PF00692 dUTPase THEYE_A1938 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A1938 PF00072 Response regulator receiver domain THEYE_A1938 PF08448 PAS fold THEYE_A1938 PF13188 PAS domain THEYE_A1938 PF00512 His Kinase A (phospho-acceptor) domain THEYE_A1940 PF01455 HupF/HypC family THEYE_A1941 PF01750 Hydrogenase maturation protease THEYE_A1942 PF00374 Nickel-dependent hydrogenase THEYE_A1943 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THEYE_A1943 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal THEYE_A1947 PF01934 Protein of unknown function DUF86 THEYE_A1948 PF00365 Phosphofructokinase THEYE_A1950 PF02021 Uncharacterised protein family UPF0102 THEYE_A1953 PF01380 SIS domain THEYE_A1953 PF00571 CBS domain THEYE_A1955 PF00977 Histidine biosynthesis protein THEYE_A1958 PF00977 Histidine biosynthesis protein THEYE_A1959 PF13722 5TM C-terminal transporter carbon starvation CstA THEYE_A1959 PF02554 Carbon starvation protein CstA THEYE_A1961 PF01266 FAD dependent oxidoreductase THEYE_A1964 PF04471 Restriction endonuclease THEYE_A1964 PF14338 Mrr N-terminal domain THEYE_A1968 PF00425 chorismate binding enzyme THEYE_A1968 PF04715 Anthranilate synthase component I, N terminal region THEYE_A1969 PF01063 Amino-transferase class IV THEYE_A1970 PF00924 Mechanosensitive ion channel THEYE_A1975 PF09190 DALR domain THEYE_A1975 PF01406 tRNA synthetases class I (C) catalytic domain THEYE_A1976 PF00588 SpoU rRNA Methylase family THEYE_A1976 PF08032 RNA 2'-O ribose methyltransferase substrate binding THEYE_A1977 PF00403 Heavy-metal-associated domain THEYE_A1979 PF02673 Bacitracin resistance protein BacA THEYE_A1980 PF01580 FtsK/SpoIIIE family THEYE_A1980 PF17854 FtsK alpha domain THEYE_A1980 PF09397 Ftsk gamma domain THEYE_A1982 PF00313 'Cold-shock' DNA-binding domain THEYE_A1983 PF04055 Radical SAM superfamily THEYE_A1984 PF00465 Iron-containing alcohol dehydrogenase THEYE_A1985 PF00155 Aminotransferase class I and II THEYE_A1986 PF01842 ACT domain THEYE_A1986 PF03447 Homoserine dehydrogenase, NAD binding domain THEYE_A1986 PF00742 Homoserine dehydrogenase THEYE_A1987 PF00899 ThiF family THEYE_A1989 PF00905 Penicillin binding protein transpeptidase domain THEYE_A1989 PF00912 Transglycosylase THEYE_A1990 PF13614 AAA domain THEYE_A1991 PF02195 ParB-like nuclease domain THEYE_A1991 PF17762 HTH domain found in ParB protein THEYE_A1992 PF02913 FAD linked oxidases, C-terminal domain THEYE_A1992 PF01565 FAD binding domain THEYE_A1993 PF02463 RecF/RecN/SMC N terminal domain THEYE_A1993 PF06470 SMC proteins Flexible Hinge Domain THEYE_A1994 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THEYE_A1994 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THEYE_A1995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THEYE_A1995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THEYE_A1997 PF02464 Competence-damaged protein THEYE_A1997 PF18146 Damage-inducible protein CinA KH domain THEYE_A1997 PF00994 Probable molybdopterin binding domain THEYE_A2000 PF00533 BRCA1 C Terminus (BRCT) domain THEYE_A2000 PF01653 NAD-dependent DNA ligase adenylation domain THEYE_A2000 PF03120 NAD-dependent DNA ligase OB-fold domain THEYE_A2000 PF03119 NAD-dependent DNA ligase C4 zinc finger domain THEYE_A2000 PF12826 Helix-hairpin-helix motif THEYE_A2001 PF02590 Predicted SPOUT methyltransferase THEYE_A2002 PF03966 Trm112p-like protein THEYE_A2003 PF00749 tRNA synthetases class I (E and Q), catalytic domain THEYE_A2004 PF00437 Type II/IV secretion system protein THEYE_A2004 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain THEYE_A2005 PF00072 Response regulator receiver domain THEYE_A2006 PF01966 HD domain THEYE_A2007 PF12706 Beta-lactamase superfamily domain THEYE_A2008 PF00211 Adenylate and Guanylate cyclase catalytic domain THEYE_A2034 PF09827 CRISPR associated protein Cas2 THEYE_A2036 PF01867 CRISPR associated protein Cas1 THEYE_A2039 PF00270 DEAD/DEAH box helicase THEYE_A2039 PF18019 HD domain THEYE_A2039 PF18395 Cas3 C-terminal domain THEYE_A2044 PF02080 TrkA-C domain THEYE_A2044 PF02254 TrkA-N domain THEYE_A2045 PF02386 Cation transport protein THEYE_A2050 PF02623 FliW protein THEYE_A2051 PF02599 Global regulator protein family THEYE_A2053 PF00669 Bacterial flagellin N-terminal helical region THEYE_A2054 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEYE_A2054 PF07196 Flagellin hook IN motif THEYE_A2057 PF01551 Peptidase family M23 THEYE_A2058 PF02119 Flagellar P-ring protein THEYE_A2059 PF02107 Flagellar L-ring protein THEYE_A2061 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEYE_A2061 PF00460 Flagella basal body rod protein THEYE_A2062 PF07559 Flagellar basal body protein FlaE THEYE_A2062 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEYE_A2062 PF00460 Flagella basal body rod protein THEYE_A2065 PF01339 CheB methylesterase THEYE_A2065 PF00072 Response regulator receiver domain THEYE_A2066 PF04344 Chemotaxis phosphatase, CheZ THEYE_A2067 PF00072 Response regulator receiver domain THEYE_A2067 PF01584 CheW-like domain THEYE_A2067 PF02895 Signal transducing histidine kinase, homodimeric domain THEYE_A2067 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEYE_A2067 PF01627 Hpt domain THEYE_A2068 PF00072 Response regulator receiver domain THEYE_A2069 PF00072 Response regulator receiver domain THEYE_A2070 PF01739 CheR methyltransferase, SAM binding domain THEYE_A2070 PF03705 CheR methyltransferase, all-alpha domain THEYE_A2072 PF04545 Sigma-70, region 4 THEYE_A2072 PF04539 Sigma-70 region 3 THEYE_A2072 PF04542 Sigma-70 region 2 THEYE_A2073 PF10609 NUBPL iron-transfer P-loop NTPase THEYE_A2074 PF02881 SRP54-type protein, helical bundle domain THEYE_A2074 PF00448 SRP54-type protein, GTPase domain THEYE_A2075 PF00771 FHIPEP family THEYE_A2076 PF01312 FlhB HrpN YscU SpaS Family THEYE_A2077 PF01311 Bacterial export proteins, family 1 THEYE_A2078 PF01313 Bacterial export proteins, family 3 THEYE_A2079 PF04347 Flagellar biosynthesis protein, FliO THEYE_A2079 PF00813 FliP family THEYE_A2080 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THEYE_A2081 PF02154 Flagellar motor switch protein FliM THEYE_A2081 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THEYE_A2082 PF03748 Flagellar basal body-associated protein FliL THEYE_A2083 PF08676 MutL C terminal dimerisation domain THEYE_A2083 PF01119 DNA mismatch repair protein, C-terminal domain THEYE_A2086 PF00437 Type II/IV secretion system protein THEYE_A2087 PF00437 Type II/IV secretion system protein THEYE_A2088 PF13419 Haloacid dehalogenase-like hydrolase THEYE_A2089 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THEYE_A2090 PF03819 MazG nucleotide pyrophosphohydrolase domain THEYE_A2094 PF00664 ABC transporter transmembrane region THEYE_A2094 PF00005 ABC transporter THEYE_A2095 PF00535 Glycosyl transferase family 2 THEYE_A2096 PF04055 Radical SAM superfamily THEYE_A2096 PF06463 Molybdenum Cofactor Synthesis C THEYE_A2098 PF00691 OmpA family THEYE_A2099 PF02092 Glycyl-tRNA synthetase beta subunit THEYE_A2099 PF05746 DALR anticodon binding domain THEYE_A2100 PF02091 Glycyl-tRNA synthetase alpha subunit