TRD_RS00025 SM00028 Tetratricopeptide repeats TRD_RS00035 SM00387 Histidine kinase-like ATPases TRD_RS00045 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TRD_RS00060 SM00382 ATPases associated with a variety of cellular activities TRD_RS00095 SM00487 DEAD-like helicases superfamily TRD_RS00095 SM00490 helicase superfamily c-terminal domain TRD_RS00160 SM01400 TRD_RS00160 TRD_RS00200 SM00893 Electron transfer flavoprotein domain TRD_RS00205 SM00893 Electron transfer flavoprotein domain TRD_RS00240 SM00422 helix_turn_helix, mercury resistance TRD_RS00315 SM00864 Tubulin/FtsZ family, GTPase domain TRD_RS00315 SM00865 Tubulin/FtsZ family, C-terminal domain TRD_RS00350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TRD_RS00390 SM00642 Alpha-amylase domain TRD_RS00400 SM00487 DEAD-like helicases superfamily TRD_RS00400 SM00490 helicase superfamily c-terminal domain TRD_RS00410 SM00903 Flavin reductase like domain TRD_RS00435 SM00937 TRD_RS00435 TRD_RS00480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRD_RS00565 SM00881 CoA binding domain TRD_RS00620 SM00345 helix_turn_helix gluconate operon transcriptional repressor TRD_RS00620 SM00895 TRD_RS00620 TRD_RS00680 SM00060 Fibronectin type 3 domain TRD_RS00715 SM00893 Electron transfer flavoprotein domain TRD_RS00720 SM00893 Electron transfer flavoprotein domain TRD_RS00810 SM00729 Elongator protein 3, MiaB family, Radical SAM TRD_RS00820 SM00487 DEAD-like helicases superfamily TRD_RS00820 SM00490 helicase superfamily c-terminal domain TRD_RS00820 SM01142 TRD_RS00820 TRD_RS00890 SM00287 Bacterial SH3 domain homologues TRD_RS00900 SM00382 ATPases associated with a variety of cellular activities TRD_RS00905 SM00382 ATPases associated with a variety of cellular activities TRD_RS00915 SM00382 ATPases associated with a variety of cellular activities TRD_RS00980 SM00382 ATPases associated with a variety of cellular activities TRD_RS00980 SM00393 Putative single-stranded nucleic acids-binding domain TRD_RS00990 SM00493 TRD_RS00990 TRD_RS00995 SM00382 ATPases associated with a variety of cellular activities TRD_RS00995 SM00843 TRD_RS00995 TRD_RS01000 SM00986 Uracil DNA glycosylase superfamily TRD_RS01000 SM00987 UreE urease accessory protein, C-terminal domain TRD_RS01010 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TRD_RS01010 SM00292 breast cancer carboxy-terminal domain TRD_RS01010 SM00532 Ligase N family TRD_RS01025 SM00851 MGS-like domain TRD_RS01025 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TRD_RS01025 SM01209 TRD_RS01025 TRD_RS01030 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TRD_RS01060 SM00382 ATPases associated with a variety of cellular activities TRD_RS01080 SM00382 ATPases associated with a variety of cellular activities TRD_RS01095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TRD_RS01105 SM00331 Sigma factor PP2C-like phosphatases TRD_RS01200 SM00346 helix_turn_helix isocitrate lyase regulation TRD_RS01260 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TRD_RS01260 SM00387 Histidine kinase-like ATPases TRD_RS01260 SM00911 HWE histidine kinase TRD_RS01280 SM00382 ATPases associated with a variety of cellular activities TRD_RS01330 SM00271 DnaJ molecular chaperone homology domain TRD_RS01380 SM00382 ATPases associated with a variety of cellular activities TRD_RS01420 SM00882 Coenzyme A transferase TRD_RS01425 SM00882 Coenzyme A transferase TRD_RS01475 SM00729 Elongator protein 3, MiaB family, Radical SAM TRD_RS01490 SM00382 ATPases associated with a variety of cellular activities TRD_RS01520 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TRD_RS01555 SM00479 TRD_RS01555 TRD_RS01555 SM00487 DEAD-like helicases superfamily TRD_RS01555 SM00491 TRD_RS01555 TRD_RS01565 SM00357 Cold shock protein domain TRD_RS01565 SM00382 ATPases associated with a variety of cellular activities TRD_RS01565 SM00959 Rho termination factor, N-terminal domain TRD_RS01640 SM00729 Elongator protein 3, MiaB family, Radical SAM TRD_RS01645 SM00028 Tetratricopeptide repeats TRD_RS01690 SM00917 LeuA allosteric (dimerisation) domain TRD_RS01695 SM00859 Semialdehyde dehydrogenase, NAD binding domain TRD_RS01765 SM00382 ATPases associated with a variety of cellular activities TRD_RS01785 SM00479 TRD_RS01785 TRD_RS01790 SM00849 Metallo-beta-lactamase superfamily TRD_RS01870 SM00957 SecA DEAD-like domain TRD_RS01870 SM00958 SecA preprotein cross-linking domain TRD_RS01915 SM01130 TRD_RS01915 TRD_RS01920 SM00873 B3/4 domain TRD_RS01945 SM00400 zinc finger TRD_RS01945 SM00493 TRD_RS01945 TRD_RS01950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TRD_RS01965 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TRD_RS01965 SM00465 GIY-YIG type nucleases (URI domain) TRD_RS01990 SM00382 ATPases associated with a variety of cellular activities TRD_RS02015 SM00363 S4 RNA-binding domain TRD_RS02025 SM00563 Phosphate acyltransferases TRD_RS02040 SM00422 helix_turn_helix, mercury resistance TRD_RS02045 SM00382 ATPases associated with a variety of cellular activities TRD_RS02045 SM01086 C-terminal, D2-small domain, of ClpB protein TRD_RS02105 SM00881 CoA binding domain TRD_RS02200 SM00861 Transketolase, pyrimidine binding domain TRD_RS02220 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TRD_RS02220 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TRD_RS02245 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TRD_RS02245 SM00245 tail specific protease TRD_RS02385 SM00450 Rhodanese Homology Domain TRD_RS02420 SM00382 ATPases associated with a variety of cellular activities TRD_RS02440 SM00825 Beta-ketoacyl synthase TRD_RS02515 SM00836 DALR anticodon binding domain TRD_RS02540 SM00942 Primase C terminal 1 (PriCT-1) TRD_RS02540 SM00943 Bifunctional DNA primase/polymerase, N-terminal TRD_RS02560 SM00382 ATPases associated with a variety of cellular activities TRD_RS02600 SM00861 Transketolase, pyrimidine binding domain TRD_RS02610 SM00116 Domain in cystathionine beta-synthase and other proteins. TRD_RS02610 SM00924 MgtE intracellular N domain TRD_RS02615 SM00849 Metallo-beta-lactamase superfamily TRD_RS02625 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TRD_RS02625 SM00481 DNA polymerase alpha chain like domain TRD_RS02625 SM00483 DNA polymerase X family TRD_RS02660 SM01092 CO dehydrogenase flavoprotein C-terminal domain TRD_RS02670 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TRD_RS02685 SM00829 Enoylreductase TRD_RS02690 SM00831 Cation transporter/ATPase, N-terminus TRD_RS02740 SM00382 ATPases associated with a variety of cellular activities TRD_RS02785 SM00946 Prolyl-tRNA synthetase, C-terminal TRD_RS02815 SM00240 Forkhead associated domain TRD_RS02820 SM00240 Forkhead associated domain TRD_RS02835 SM01152 TRD_RS02835 TRD_RS02850 SM00316 Ribosomal protein S1-like RNA-binding domain TRD_RS02850 SM00322 K homology RNA-binding domain TRD_RS02855 SM01387 TRD_RS02855 TRD_RS02880 SM00448 cheY-homologous receiver domain TRD_RS02880 SM00862 Transcriptional regulatory protein, C terminal TRD_RS02890 SM00331 Sigma factor PP2C-like phosphatases TRD_RS02890 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain TRD_RS02900 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TRD_RS02920 SM00873 B3/4 domain TRD_RS02920 SM00874 tRNA synthetase B5 domain TRD_RS02920 SM00896 Ferredoxin-fold anticodon binding domain TRD_RS02930 SM01192 TRD_RS02930 TRD_RS02930 SM01193 TRD_RS02930 TRD_RS02950 SM01001 AIR carboxylase TRD_RS02955 SM01329 TRD_RS02955 TRD_RS02985 SM00434 DNA Topoisomerase IV TRD_RS03030 SM00788 Adenylosuccinate synthetase TRD_RS03035 SM00271 DnaJ molecular chaperone homology domain TRD_RS03060 SM00463 Small MutS-related domain TRD_RS03060 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TRD_RS03060 SM00534 ATPase domain of DNA mismatch repair MUTS family TRD_RS03070 SM00487 DEAD-like helicases superfamily TRD_RS03070 SM00490 helicase superfamily c-terminal domain TRD_RS03070 SM00982 TRD_RS03070 TRD_RS03070 SM01058 CarD-like/TRCF domain TRD_RS03075 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TRD_RS03115 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TRD_RS03115 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TRD_RS03120 SM00649 Ribosomal protein L11/L12 TRD_RS03145 SM00448 cheY-homologous receiver domain TRD_RS03145 SM01012 TRD_RS03145 TRD_RS03165 SM00382 ATPases associated with a variety of cellular activities TRD_RS03195 SM00967 RNA 2'-O ribose methyltransferase substrate binding TRD_RS03200 SM00840 TRD_RS03200 TRD_RS03205 SM00834 Putative regulatory protein TRD_RS03210 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TRD_RS03210 SM00474 3'-5' exonuclease TRD_RS03210 SM00475 5'-3' exonuclease TRD_RS03210 SM00482 DNA polymerase A domain TRD_RS03215 SM00382 ATPases associated with a variety of cellular activities TRD_RS03225 SM00460 Transglutaminase/protease-like homologues TRD_RS03280 SM00480 DNA polymerase III beta subunit TRD_RS03300 SM00382 ATPases associated with a variety of cellular activities TRD_RS03330 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TRD_RS03340 SM00732 Likely ribonuclease with RNase H fold. TRD_RS03365 SM00530 Helix-turn-helix XRE-family like proteins TRD_RS03370 SM00481 DNA polymerase alpha chain like domain TRD_RS03400 SM00998 Adenylosuccinate lyase C-terminus TRD_RS03415 SM01211 TRD_RS03415 TRD_RS03445 SM00382 ATPases associated with a variety of cellular activities TRD_RS03510 SM00829 Enoylreductase TRD_RS03515 SM00363 S4 RNA-binding domain TRD_RS03520 SM00904 Riboflavin kinase TRD_RS03550 SM00316 Ribosomal protein S1-like RNA-binding domain TRD_RS03550 SM00322 K homology RNA-binding domain TRD_RS03560 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TRD_RS03630 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TRD_RS03650 SM00825 Beta-ketoacyl synthase TRD_RS03670 SM00363 S4 RNA-binding domain TRD_RS03675 SM01001 AIR carboxylase TRD_RS03725 SM00984 UDP binding domain TRD_RS03740 SM00116 Domain in cystathionine beta-synthase and other proteins. TRD_RS03750 SM00849 Metallo-beta-lactamase superfamily TRD_RS03805 SM00967 RNA 2'-O ribose methyltransferase substrate binding TRD_RS03810 SM00411 bacterial (prokaryotic) histone like domain TRD_RS03815 SM00387 Histidine kinase-like ATPases TRD_RS03815 SM00433 TopoisomeraseII TRD_RS03905 SM00838 Elongation factor G C-terminus TRD_RS03960 SM00960 Roadblock/LC7 domain TRD_RS03980 SM00798 AICARFT/IMPCHase bienzyme TRD_RS03980 SM00851 MGS-like domain TRD_RS03990 SM00933 TRD_RS03990 TRD_RS04000 SM01208 TRD_RS04000 TRD_RS04055 SM00382 ATPases associated with a variety of cellular activities TRD_RS04085 SM00116 Domain in cystathionine beta-synthase and other proteins. TRD_RS04195 SM01209 TRD_RS04195 TRD_RS04220 SM00996 S-adenosyl-L-homocysteine hydrolase TRD_RS04220 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TRD_RS04240 SM00852 Probable molybdopterin binding domain TRD_RS04265 SM00567 E-Z type HEAT repeats TRD_RS04390 SM00662 RNA polymerases D TRD_RS04395 SM00363 S4 RNA-binding domain TRD_RS04395 SM01390 TRD_RS04395 TRD_RS04415 SM00316 Ribosomal protein S1-like RNA-binding domain TRD_RS04475 SM01374 TRD_RS04475 TRD_RS04495 SM00322 K homology RNA-binding domain TRD_RS04510 SM01382 TRD_RS04510 TRD_RS04510 SM01383 TRD_RS04510 TRD_RS04530 SM01403 TRD_RS04530 TRD_RS04540 SM00838 Elongation factor G C-terminus TRD_RS04540 SM00889 Elongation factor G, domain IV TRD_RS04555 SM00663 RNA polymerase I subunit A N-terminus TRD_RS04585 SM00287 Bacterial SH3 domain homologues TRD_RS04655 SM00448 cheY-homologous receiver domain TRD_RS04660 SM00858 TRD_RS04660 TRD_RS04705 SM00382 ATPases associated with a variety of cellular activities TRD_RS04705 SM00464 Found in ATP-dependent protease La (LON) TRD_RS04750 SM00363 S4 RNA-binding domain TRD_RS04765 SM00382 ATPases associated with a variety of cellular activities TRD_RS04770 SM00382 ATPases associated with a variety of cellular activities TRD_RS04770 SM01086 C-terminal, D2-small domain, of ClpB protein TRD_RS04775 SM00316 Ribosomal protein S1-like RNA-binding domain TRD_RS04790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TRD_RS04795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRD_RS04800 SM00729 Elongator protein 3, MiaB family, Radical SAM TRD_RS04815 SM00852 Probable molybdopterin binding domain TRD_RS04860 SM00470 ParB-like nuclease domain TRD_RS04875 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TRD_RS04875 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TRD_RS04880 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TRD_RS04915 SM00838 Elongation factor G C-terminus TRD_RS04915 SM00889 Elongation factor G, domain IV TRD_RS04930 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TRD_RS04970 SM00382 ATPases associated with a variety of cellular activities TRD_RS04975 SM00347 helix_turn_helix multiple antibiotic resistance protein TRD_RS05020 SM00393 Putative single-stranded nucleic acids-binding domain TRD_RS05020 SM01245 TRD_RS05020 TRD_RS05030 SM01234 TRD_RS05030 TRD_RS05050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TRD_RS05135 SM00938 Nitrogen regulatory protein P-II TRD_RS05155 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TRD_RS05155 SM00534 ATPase domain of DNA mismatch repair MUTS family TRD_RS05180 SM00100 Cyclic nucleotide-monophosphate binding domain TRD_RS05180 SM00116 Domain in cystathionine beta-synthase and other proteins. TRD_RS05220 SM01004 Delta-aminolevulinic acid dehydratase TRD_RS05255 SM00487 DEAD-like helicases superfamily TRD_RS05255 SM00490 helicase superfamily c-terminal domain TRD_RS05275 SM00382 ATPases associated with a variety of cellular activities TRD_RS05310 SM01350 TRD_RS05310 TRD_RS05345 SM00382 ATPases associated with a variety of cellular activities TRD_RS05440 SM00382 ATPases associated with a variety of cellular activities TRD_RS05440 SM00760 Bacterial dnaA protein helix-turn-helix domain TRD_RS05460 SM00450 Rhodanese Homology Domain TRD_RS05480 SM00481 DNA polymerase alpha chain like domain TRD_RS05510 SM01119 TRD_RS05510 TRD_RS05525 SM01209 TRD_RS05525 TRD_RS05525 SM01210 TRD_RS05525 TRD_RS05530 SM00421 helix_turn_helix, Lux Regulon TRD_RS05530 SM00448 cheY-homologous receiver domain TRD_RS05555 SM00422 helix_turn_helix, mercury resistance TRD_RS05570 SM00529 Helix-turn-helix diphteria tox regulatory element TRD_RS05570 SM00899 TRD_RS05570 TRD_RS05600 SM00382 ATPases associated with a variety of cellular activities TRD_RS05600 SM00994 ClpX C4-type zinc finger TRD_RS05600 SM01086 C-terminal, D2-small domain, of ClpB protein TRD_RS05630 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TRD_RS05635 SM01092 CO dehydrogenase flavoprotein C-terminal domain TRD_RS05645 SM00327 von Willebrand factor (vWF) type A domain TRD_RS05670 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TRD_RS05690 SM00382 ATPases associated with a variety of cellular activities TRD_RS05735 SM00382 ATPases associated with a variety of cellular activities TRD_RS05800 SM00729 Elongator protein 3, MiaB family, Radical SAM TRD_RS05930 SM00244 prohibitin homologues TRD_RS05955 SM00448 cheY-homologous receiver domain TRD_RS05955 SM00862 Transcriptional regulatory protein, C terminal TRD_RS05970 SM00861 Transketolase, pyrimidine binding domain TRD_RS06035 SM00852 Probable molybdopterin binding domain TRD_RS06050 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TRD_RS06100 SM00883 Chaperonin 10 Kd subunit TRD_RS06125 SM00650 Ribosomal RNA adenine dimethylases TRD_RS06140 SM00450 Rhodanese Homology Domain TRD_RS06145 SM00232 JAB/MPN domain TRD_RS06160 SM00220 Serine/Threonine protein kinases, catalytic domain TRD_RS06160 SM00740 TRD_RS06160 TRD_RS06205 SM00347 helix_turn_helix multiple antibiotic resistance protein TRD_RS06230 SM00905 Dihydroneopterin aldolase TRD_RS06300 SM00506 Appr-1"-p processing enzyme TRD_RS06305 SM01329 TRD_RS06305 TRD_RS06310 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TRD_RS06390 SM00867 YceI-like domain TRD_RS06395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TRD_RS06415 SM00421 helix_turn_helix, Lux Regulon TRD_RS06415 SM00448 cheY-homologous receiver domain TRD_RS06420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TRD_RS06425 SM00849 Metallo-beta-lactamase superfamily TRD_RS06455 SM01400 TRD_RS06455 TRD_RS06460 SM00358 Double-stranded RNA binding motif TRD_RS06460 SM00535 Ribonuclease III family TRD_RS06505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRD_RS06535 SM00903 Flavin reductase like domain TRD_RS06545 SM00859 Semialdehyde dehydrogenase, NAD binding domain TRD_RS06550 SM00346 helix_turn_helix isocitrate lyase regulation TRD_RS06580 SM00382 ATPases associated with a variety of cellular activities TRD_RS06585 SM00382 ATPases associated with a variety of cellular activities TRD_RS06605 SM00382 ATPases associated with a variety of cellular activities TRD_RS06610 SM00382 ATPases associated with a variety of cellular activities TRD_RS06635 SM00933 TRD_RS06635 TRD_RS06640 SM00382 ATPases associated with a variety of cellular activities TRD_RS06655 SM00854 Bacterial capsule synthesis protein PGA_cap TRD_RS06665 SM00052 Putative diguanylate phosphodiesterase TRD_RS06740 SM00729 Elongator protein 3, MiaB family, Radical SAM TRD_RS06750 SM00116 Domain in cystathionine beta-synthase and other proteins. TRD_RS06750 SM01240 TRD_RS06750 TRD_RS06810 SM00271 DnaJ molecular chaperone homology domain TRD_RS06885 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TRD_RS06885 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TRD_RS06890 SM00845 GatB domain TRD_RS06895 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TRD_RS06930 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TRD_RS06975 SM00861 Transketolase, pyrimidine binding domain TRD_RS07020 SM00382 ATPases associated with a variety of cellular activities TRD_RS07030 SM00849 Metallo-beta-lactamase superfamily TRD_RS07095 SM00859 Semialdehyde dehydrogenase, NAD binding domain TRD_RS07145 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TRD_RS07155 SM00028 Tetratricopeptide repeats TRD_RS07225 SM00382 ATPases associated with a variety of cellular activities TRD_RS07250 SM00487 DEAD-like helicases superfamily TRD_RS07250 SM00490 helicase superfamily c-terminal domain TRD_RS07260 SM00421 helix_turn_helix, Lux Regulon TRD_RS07260 SM00448 cheY-homologous receiver domain TRD_RS07265 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TRD_RS07265 SM00387 Histidine kinase-like ATPases TRD_RS07285 SM01230 TRD_RS07285 TRD_RS07290 SM01230 TRD_RS07290 TRD_RS07310 SM00382 ATPases associated with a variety of cellular activities TRD_RS07310 SM00464 Found in ATP-dependent protease La (LON) TRD_RS07355 SM00287 Bacterial SH3 domain homologues TRD_RS07470 SM00634 Bacterial Ig-like domain (group 1) TRD_RS07475 SM00091 PAS domain TRD_RS07475 SM00387 Histidine kinase-like ATPases TRD_RS07475 SM00388 His Kinase A (phosphoacceptor) domain TRD_RS07480 SM00448 cheY-homologous receiver domain TRD_RS07480 SM00862 Transcriptional regulatory protein, C terminal TRD_RS07495 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TRD_RS07495 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TRD_RS07495 SM00493 TRD_RS07495 TRD_RS07505 SM00382 ATPases associated with a variety of cellular activities TRD_RS07505 SM01086 C-terminal, D2-small domain, of ClpB protein TRD_RS07540 SM00487 DEAD-like helicases superfamily TRD_RS07540 SM00490 helicase superfamily c-terminal domain TRD_RS07550 SM00072 Guanylate kinase homologues. TRD_RS07565 SM00823 Phosphopantetheine attachment site TRD_RS07575 SM00878 Biotin carboxylase C-terminal domain TRD_RS07580 SM00822 TRD_RS07580 TRD_RS07585 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TRD_RS07620 SM00382 ATPases associated with a variety of cellular activities TRD_RS07625 SM00382 ATPases associated with a variety of cellular activities TRD_RS07655 SM00937 TRD_RS07655 TRD_RS07765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TRD_RS07800 SM00518 AP endonuclease family 2 TRD_RS07805 SM00387 Histidine kinase-like ATPases TRD_RS07810 SM00421 helix_turn_helix, Lux Regulon TRD_RS07810 SM00448 cheY-homologous receiver domain TRD_RS07815 SM00853 MutL C terminal dimerisation domain TRD_RS07815 SM01340 TRD_RS07815 TRD_RS07910 SM01235 TRD_RS07910 TRD_RS07915 SM00917 LeuA allosteric (dimerisation) domain TRD_RS07930 SM01329 TRD_RS07930 TRD_RS07940 SM00636 TRD_RS07940 TRD_RS07955 SM00841 Elongation factor P, C-terminal TRD_RS07955 SM01185 TRD_RS07955 TRD_RS07985 SM00347 helix_turn_helix multiple antibiotic resistance protein TRD_RS08005 SM00852 Probable molybdopterin binding domain TRD_RS08010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TRD_RS08010 SM00954 Region found in RelA / SpoT proteins TRD_RS08030 SM00382 ATPases associated with a variety of cellular activities TRD_RS08045 SM00116 Domain in cystathionine beta-synthase and other proteins. TRD_RS08080 SM00670 Large family of predicted nucleotide-binding domains TRD_RS08085 SM00481 DNA polymerase alpha chain like domain TRD_RS08115 SM00861 Transketolase, pyrimidine binding domain TRD_RS08150 SM00507 HNH nucleases TRD_RS08175 SM00968 SMC proteins Flexible Hinge Domain TRD_RS08190 SM00450 Rhodanese Homology Domain TRD_RS08210 SM00421 helix_turn_helix, Lux Regulon TRD_RS08235 SM00382 ATPases associated with a variety of cellular activities TRD_RS08275 SM00562 TRD_RS08275 TRD_RS08365 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TRD_RS08375 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TRD_RS08385 SM00849 Metallo-beta-lactamase superfamily TRD_RS08415 SM01007 Class II Aldolase and Adducin N-terminal domain TRD_RS08420 SM00881 CoA binding domain TRD_RS08440 SM00861 Transketolase, pyrimidine binding domain TRD_RS08475 SM00421 helix_turn_helix, Lux Regulon TRD_RS08475 SM00448 cheY-homologous receiver domain TRD_RS08480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRD_RS08480 SM00387 Histidine kinase-like ATPases TRD_RS08485 SM00382 ATPases associated with a variety of cellular activities TRD_RS08485 SM00962 SRP54-type protein, GTPase domain TRD_RS08485 SM00963 SRP54-type protein, helical bundle domain TRD_RS08490 SM00382 ATPases associated with a variety of cellular activities TRD_RS08490 SM00962 SRP54-type protein, GTPase domain TRD_RS08490 SM00963 SRP54-type protein, helical bundle domain TRD_RS08505 SM00644 TRD_RS08505 TRD_RS08505 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. TRD_RS08535 SM00382 ATPases associated with a variety of cellular activities TRD_RS08540 SM00382 ATPases associated with a variety of cellular activities TRD_RS08560 SM00448 cheY-homologous receiver domain TRD_RS08560 SM00862 Transcriptional regulatory protein, C terminal TRD_RS08625 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TRD_RS08630 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TRD_RS08785 SM00322 K homology RNA-binding domain TRD_RS08785 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TRD_RS08795 SM00240 Forkhead associated domain TRD_RS08860 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain TRD_RS08860 SM01232 TRD_RS08860 TRD_RS09015 SM00642 Alpha-amylase domain TRD_RS09020 SM00642 Alpha-amylase domain TRD_RS09030 SM00642 Alpha-amylase domain TRD_RS09065 SM00046 Diacylglycerol kinase catalytic domain (presumed) TRD_RS09070 SM01007 Class II Aldolase and Adducin N-terminal domain TRD_RS09075 SM00829 Enoylreductase TRD_RS09090 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TRD_RS09125 SM00382 ATPases associated with a variety of cellular activities TRD_RS09130 SM00382 ATPases associated with a variety of cellular activities TRD_RS09135 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TRD_RS09140 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TRD_RS09145 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TRD_RS09160 SM00257 Lysin motif TRD_RS09170 SM00849 Metallo-beta-lactamase superfamily TRD_RS09220 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TRD_RS09240 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain TRD_RS09565 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TRD_RS09565 SM00091 PAS domain TRD_RS09750 SM00490 helicase superfamily c-terminal domain TRD_RS10785 SM00487 DEAD-like helicases superfamily TRD_RS11200 SM00382 ATPases associated with a variety of cellular activities TRD_RS11955 SM00946 Prolyl-tRNA synthetase, C-terminal TRD_RS13385 SM00116 Domain in cystathionine beta-synthase and other proteins. TRD_RS13385 SM01091 Transporter associated domain TRD_RS13390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TRD_RS13390 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TRD_RS13390 SM00091 PAS domain TRD_RS13390 SM00267 diguanylate cyclase TRD_RS13400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRD_RS13425 SM00849 Metallo-beta-lactamase superfamily TRD_RS13475 SM00257 Lysin motif TRD_RS13495 SM00530 Helix-turn-helix XRE-family like proteins TRD_RS13515 SM00834 Putative regulatory protein TRD_RS13535 SM00854 Bacterial capsule synthesis protein PGA_cap TRD_RS13560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TRD_RS13570 SM00479 TRD_RS13570 TRD_RS13605 SM00347 helix_turn_helix multiple antibiotic resistance protein TRD_RS13605 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TRD_RS13620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRD_RS13620 SM00387 Histidine kinase-like ATPases TRD_RS13620 SM00388 His Kinase A (phosphoacceptor) domain TRD_RS13670 SM00052 Putative diguanylate phosphodiesterase TRD_RS13670 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TRD_RS13670 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TRD_RS13670 SM00091 PAS domain TRD_RS13670 SM00267 diguanylate cyclase TRD_RS13685 SM00644 TRD_RS13685 TRD_RS13700 SM00014 Acid phosphatase homologues TRD_RS13735 SM00052 Putative diguanylate phosphodiesterase TRD_RS13735 SM00091 PAS domain TRD_RS13735 SM00267 diguanylate cyclase TRD_RS13765 SM00052 Putative diguanylate phosphodiesterase TRD_RS13765 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TRD_RS13765 SM00091 PAS domain TRD_RS13765 SM00267 diguanylate cyclase TRD_RS13775 SM00257 Lysin motif TRD_RS13915 SM01130 TRD_RS13915