locus-tag class description CDC40_RS00005 PF08240 Alcohol dehydrogenase GroES-like domain CDC40_RS00005 PF00107 Zinc-binding dehydrogenase CDC40_RS00010 PF13180 PDZ domain CDC40_RS00025 PF01979 Amidohydrolase family CDC40_RS00025 PF00449 Urease alpha-subunit, N-terminal domain CDC40_RS00035 PF07238 PilZ domain CDC40_RS00035 PF00535 Glycosyl transferase family 2 CDC40_RS00035 PF03170 Bacterial cellulose synthase subunit CDC40_RS00050 PF00005 ABC transporter CDC40_RS00065 PF01546 Peptidase family M20/M25/M40 CDC40_RS00065 PF07687 Peptidase dimerisation domain CDC40_RS00070 PF01928 CYTH domain CDC40_RS00075 PF03055 Retinal pigment epithelial membrane protein CDC40_RS00080 PF03092 BT1 family CDC40_RS00085 PF11910 Cyanobacterial and plant NDH-1 subunit O CDC40_RS00090 PF00483 Nucleotidyl transferase CDC40_RS00090 PF01050 Mannose-6-phosphate isomerase CDC40_RS00095 PF02681 Divergent PAP2 family CDC40_RS00100 PF00348 Polyprenyl synthetase CDC40_RS00105 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDC40_RS00105 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDC40_RS00125 PF01475 Ferric uptake regulator family CDC40_RS00145 PF07689 KaiB domain CDC40_RS00145 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS00145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS00160 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDC40_RS00160 PF01348 Type II intron maturase CDC40_RS00165 PF13419 Haloacid dehalogenase-like hydrolase CDC40_RS00175 PF00580 UvrD/REP helicase N-terminal domain CDC40_RS00175 PF13361 UvrD-like helicase C-terminal domain CDC40_RS00185 PF00535 Glycosyl transferase family 2 CDC40_RS00185 PF13181 Tetratricopeptide repeat CDC40_RS00195 PF01618 MotA/TolQ/ExbB proton channel family CDC40_RS00200 PF04542 Sigma-70 region 2 CDC40_RS00200 PF08281 Sigma-70, region 4 CDC40_RS00225 PF02684 Lipid-A-disaccharide synthetase CDC40_RS00230 PF04107 Glutamate-cysteine ligase family 2(GCS2) CDC40_RS00240 PF00226 DnaJ domain CDC40_RS00240 PF00684 DnaJ central domain CDC40_RS00240 PF01556 DnaJ C terminal domain CDC40_RS00245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDC40_RS00245 PF01842 ACT domain CDC40_RS00245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDC40_RS00255 PF13439 Glycosyltransferase Family 4 CDC40_RS00255 PF00534 Glycosyl transferases group 1 CDC40_RS00260 PF00005 ABC transporter CDC40_RS00270 PF00699 Urease beta subunit CDC40_RS00275 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CDC40_RS00275 PF01243 Pyridoxamine 5'-phosphate oxidase CDC40_RS00285 PF03330 Lytic transglycolase CDC40_RS00290 PF01964 Radical SAM ThiC family CDC40_RS00295 PF01384 Phosphate transporter family CDC40_RS00305 PF01593 Flavin containing amine oxidoreductase CDC40_RS00315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDC40_RS00315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDC40_RS00325 PF12697 Alpha/beta hydrolase family CDC40_RS00340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDC40_RS00350 PF00072 Response regulator receiver domain CDC40_RS00355 PF00072 Response regulator receiver domain CDC40_RS00365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC40_RS00365 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CDC40_RS00370 PF01584 CheW-like domain CDC40_RS00370 PF02895 Signal transducing histidine kinase, homodimeric domain CDC40_RS00370 PF00072 Response regulator receiver domain CDC40_RS00370 PF01627 Hpt domain CDC40_RS00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS00375 PF08148 DSHCT (NUC185) domain CDC40_RS00375 PF00271 Helicase conserved C-terminal domain CDC40_RS00375 PF00270 DEAD/DEAH box helicase CDC40_RS00385 PF14251 Domain of unknown function (DUF4346) CDC40_RS00410 PF00085 Thioredoxin CDC40_RS00425 PF12323 Helix-turn-helix domain CDC40_RS00425 PF01385 Probable transposase CDC40_RS00425 PF07282 Putative transposase DNA-binding domain CDC40_RS00430 PF18152 DAHP synthase ferredoxin-like domain CDC40_RS00430 PF00793 DAHP synthetase I family CDC40_RS00465 PF00155 Aminotransferase class I and II CDC40_RS00470 PF00226 DnaJ domain CDC40_RS00470 PF01556 DnaJ C terminal domain CDC40_RS00475 PF02548 Ketopantoate hydroxymethyltransferase CDC40_RS00485 PF03447 Homoserine dehydrogenase, NAD binding domain CDC40_RS00485 PF00742 Homoserine dehydrogenase CDC40_RS00485 PF01842 ACT domain CDC40_RS00490 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS00495 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS00510 PF11965 Domain of unknown function (DUF3479) CDC40_RS00510 PF02514 CobN/Magnesium Chelatase CDC40_RS00515 PF00005 ABC transporter CDC40_RS00525 PF03741 Integral membrane protein TerC family CDC40_RS00530 PF00334 Nucleoside diphosphate kinase CDC40_RS00535 PF02567 Phenazine biosynthesis-like protein CDC40_RS00540 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CDC40_RS00540 PF12557 Cob(I)alamin adenosyltransferase N terminal CDC40_RS00545 PF04545 Sigma-70, region 4 CDC40_RS00545 PF04539 Sigma-70 region 3 CDC40_RS00545 PF04542 Sigma-70 region 2 CDC40_RS00545 PF00140 Sigma-70 factor, region 1.2 CDC40_RS00550 PF15975 Flotillin CDC40_RS00550 PF01145 SPFH domain / Band 7 family CDC40_RS00555 PF15975 Flotillin CDC40_RS00555 PF01145 SPFH domain / Band 7 family CDC40_RS00565 PF02569 Pantoate-beta-alanine ligase CDC40_RS00565 PF02224 Cytidylate kinase CDC40_RS00580 PF07687 Peptidase dimerisation domain CDC40_RS00580 PF01546 Peptidase family M20/M25/M40 CDC40_RS00585 PF00072 Response regulator receiver domain CDC40_RS00595 PF02463 RecF/RecN/SMC N terminal domain CDC40_RS00605 PF04472 Cell division protein SepF CDC40_RS00610 PF01891 Cobalt uptake substrate-specific transmembrane region CDC40_RS00615 PF02553 Cobalt transport protein component CbiN CDC40_RS00625 PF00005 ABC transporter CDC40_RS00630 PF00072 Response regulator receiver domain CDC40_RS00640 PF13180 PDZ domain CDC40_RS00645 PF02153 Prephenate dehydrogenase CDC40_RS00660 PF00069 Protein kinase domain CDC40_RS00670 PF00805 Pentapeptide repeats (8 copies) CDC40_RS00670 PF00069 Protein kinase domain CDC40_RS00680 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N CDC40_RS00690 PF12169 DNA polymerase III subunits gamma and tau domain III CDC40_RS00700 PF11264 Thylakoid formation protein CDC40_RS00710 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC40_RS00715 PF02075 Crossover junction endodeoxyribonuclease RuvC CDC40_RS00740 PF01336 OB-fold nucleic acid binding domain CDC40_RS00740 PF00152 tRNA synthetases class II (D, K and N) CDC40_RS00740 PF02938 GAD domain CDC40_RS00750 PF00924 Mechanosensitive ion channel CDC40_RS00760 PF00936 BMC domain CDC40_RS00765 PF03309 Type III pantothenate kinase CDC40_RS00775 PF12911 N-terminal TM domain of oligopeptide transport permease C CDC40_RS00775 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS00780 PF00486 Transcriptional regulatory protein, C terminal CDC40_RS00780 PF00072 Response regulator receiver domain CDC40_RS00790 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CDC40_RS00790 PF12706 Beta-lactamase superfamily domain CDC40_RS00800 PF00561 alpha/beta hydrolase fold CDC40_RS00805 PF00990 Diguanylate cyclase, GGDEF domain CDC40_RS00805 PF07694 5TMR of 5TMR-LYT CDC40_RS00810 PF00873 AcrB/AcrD/AcrF family CDC40_RS00820 PF12773 Double zinc ribbon CDC40_RS00820 PF00498 FHA domain CDC40_RS00825 PF00069 Protein kinase domain CDC40_RS00850 PF02384 N-6 DNA Methylase CDC40_RS00855 PF07669 Eco57I restriction-modification methylase CDC40_RS00880 PF00124 Photosynthetic reaction centre protein CDC40_RS00890 PF07282 Putative transposase DNA-binding domain CDC40_RS00890 PF01385 Probable transposase CDC40_RS00890 PF12323 Helix-turn-helix domain CDC40_RS00905 PF00005 ABC transporter CDC40_RS00905 PF13732 Domain of unknown function (DUF4162) CDC40_RS00915 PF00591 Glycosyl transferase family, a/b domain CDC40_RS00915 PF02885 Glycosyl transferase family, helical bundle domain CDC40_RS00915 PF00117 Glutamine amidotransferase class-I CDC40_RS00930 PF08865 Domain of unknown function (DUF1830) CDC40_RS00940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDC40_RS00940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDC40_RS00945 PF00266 Aminotransferase class-V CDC40_RS00960 PF01063 Amino-transferase class IV CDC40_RS00970 PF00069 Protein kinase domain CDC40_RS00990 PF01728 FtsJ-like methyltransferase CDC40_RS00990 PF01479 S4 domain CDC40_RS01005 PF00578 AhpC/TSA family CDC40_RS01005 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDC40_RS01020 PF00578 AhpC/TSA family CDC40_RS01030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC40_RS01035 PF02421 Ferrous iron transport protein B CDC40_RS01035 PF07664 Ferrous iron transport protein B C terminus CDC40_RS01035 PF07670 Nucleoside recognition CDC40_RS01050 PF02405 Permease MlaE CDC40_RS01060 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CDC40_RS01075 PF00462 Glutaredoxin CDC40_RS01075 PF08534 Redoxin CDC40_RS01095 PF08078 PsaX family CDC40_RS01100 PF00085 Thioredoxin CDC40_RS01110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDC40_RS01115 PF03819 MazG nucleotide pyrophosphohydrolase domain CDC40_RS01120 PF01430 Hsp33 protein CDC40_RS01130 PF01553 Acyltransferase CDC40_RS01145 PF13419 Haloacid dehalogenase-like hydrolase CDC40_RS01160 PF16124 RecQ zinc-binding CDC40_RS01160 PF00271 Helicase conserved C-terminal domain CDC40_RS01160 PF00270 DEAD/DEAH box helicase CDC40_RS01175 PF00032 Cytochrome b(C-terminal)/b6/petD CDC40_RS01180 PF00033 Cytochrome b/b6/petB CDC40_RS01190 PF13458 Periplasmic binding protein CDC40_RS01195 PF04461 Protein of unknown function (DUF520) CDC40_RS01200 PF11016 Protein of unknown function (DUF2854) CDC40_RS01205 PF00012 Hsp70 protein CDC40_RS01210 PF00226 DnaJ domain CDC40_RS01210 PF01556 DnaJ C terminal domain CDC40_RS01210 PF00684 DnaJ central domain CDC40_RS01225 PF01029 NusB family CDC40_RS01240 PF01761 3-dehydroquinate synthase CDC40_RS01245 PF07690 Major Facilitator Superfamily CDC40_RS01250 PF00343 Carbohydrate phosphorylase CDC40_RS01260 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDC40_RS01275 PF03129 Anticodon binding domain CDC40_RS01275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDC40_RS01275 PF04073 Aminoacyl-tRNA editing domain CDC40_RS01290 PF00892 EamA-like transporter family CDC40_RS01295 PF00149 Calcineurin-like phosphoesterase CDC40_RS01300 PF04055 Radical SAM superfamily CDC40_RS01300 PF13282 Domain of unknown function (DUF4070) CDC40_RS01300 PF02310 B12 binding domain CDC40_RS01305 PF01022 Bacterial regulatory protein, arsR family CDC40_RS01310 PF00117 Glutamine amidotransferase class-I CDC40_RS01310 PF06418 CTP synthase N-terminus CDC40_RS01320 PF01888 CbiD CDC40_RS01330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDC40_RS01330 PF02896 PEP-utilising enzyme, TIM barrel domain CDC40_RS01330 PF00391 PEP-utilising enzyme, mobile domain CDC40_RS01335 PF00171 Aldehyde dehydrogenase family CDC40_RS01340 PF00534 Glycosyl transferases group 1 CDC40_RS01340 PF08323 Starch synthase catalytic domain CDC40_RS01350 PF01628 HrcA protein C terminal domain CDC40_RS01350 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CDC40_RS01355 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDC40_RS01355 PF00117 Glutamine amidotransferase class-I CDC40_RS01360 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS01365 PF00684 DnaJ central domain CDC40_RS01365 PF01556 DnaJ C terminal domain CDC40_RS01365 PF00226 DnaJ domain CDC40_RS01395 PF08264 Anticodon-binding domain of tRNA CDC40_RS01395 PF09334 tRNA synthetases class I (M) CDC40_RS01405 PF03040 CemA family CDC40_RS01440 PF00155 Aminotransferase class I and II CDC40_RS01445 PF02272 DHHA1 domain CDC40_RS01445 PF01411 tRNA synthetases class II (A) CDC40_RS01445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDC40_RS01450 PF01478 Type IV leader peptidase family CDC40_RS01450 PF06750 Bacterial Peptidase A24 N-terminal domain CDC40_RS01465 PF00563 EAL domain CDC40_RS01465 PF00360 Phytochrome region CDC40_RS01465 PF00990 Diguanylate cyclase, GGDEF domain CDC40_RS01465 PF01590 GAF domain CDC40_RS01470 PF00202 Aminotransferase class-III CDC40_RS01475 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS01480 PF07688 KaiA C-terminal domain CDC40_RS01485 PF07689 KaiB domain CDC40_RS01490 PF06745 KaiC CDC40_RS01495 PF01513 ATP-NAD kinase CDC40_RS01510 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC40_RS01525 PF01458 Uncharacterized protein family (UPF0051) CDC40_RS01535 PF12697 Alpha/beta hydrolase family CDC40_RS01540 PF03912 Psb28 protein CDC40_RS01545 PF01220 Dehydroquinase class II CDC40_RS01560 PF13545 Crp-like helix-turn-helix domain CDC40_RS01560 PF00027 Cyclic nucleotide-binding domain CDC40_RS01570 PF00140 Sigma-70 factor, region 1.2 CDC40_RS01570 PF04542 Sigma-70 region 2 CDC40_RS01570 PF04539 Sigma-70 region 3 CDC40_RS01570 PF04545 Sigma-70, region 4 CDC40_RS01575 PF08544 GHMP kinases C terminal CDC40_RS01575 PF00288 GHMP kinases N terminal domain CDC40_RS01580 PF00950 ABC 3 transport family CDC40_RS01585 PF00814 Glycoprotease family CDC40_RS01590 PF02082 Transcriptional regulator CDC40_RS01595 PF00291 Pyridoxal-phosphate dependent enzyme CDC40_RS01605 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDC40_RS01615 PF05697 Bacterial trigger factor protein (TF) CDC40_RS01615 PF05698 Bacterial trigger factor protein (TF) C-terminus CDC40_RS01620 PF00574 Clp protease CDC40_RS01625 PF07724 AAA domain (Cdc48 subfamily) CDC40_RS01625 PF10431 C-terminal, D2-small domain, of ClpB protein CDC40_RS01625 PF06689 ClpX C4-type zinc finger CDC40_RS01630 PF00106 short chain dehydrogenase CDC40_RS01635 PF01385 Probable transposase CDC40_RS01635 PF07282 Putative transposase DNA-binding domain CDC40_RS01635 PF12323 Helix-turn-helix domain CDC40_RS01650 PF01209 ubiE/COQ5 methyltransferase family CDC40_RS01655 PF00582 Universal stress protein family CDC40_RS01670 PF00834 Ribulose-phosphate 3 epimerase family CDC40_RS01675 PF05690 Thiazole biosynthesis protein ThiG CDC40_RS01675 PF01266 FAD dependent oxidoreductase CDC40_RS01685 PF02769 AIR synthase related protein, C-terminal domain CDC40_RS01685 PF00586 AIR synthase related protein, N-terminal domain CDC40_RS01690 PF00427 Phycobilisome Linker polypeptide CDC40_RS01690 PF00502 Phycobilisome protein CDC40_RS01695 PF00072 Response regulator receiver domain CDC40_RS01695 PF00486 Transcriptional regulatory protein, C terminal CDC40_RS01720 PF00679 Elongation factor G C-terminus CDC40_RS01720 PF14492 Elongation Factor G, domain II CDC40_RS01720 PF00009 Elongation factor Tu GTP binding domain CDC40_RS01720 PF03764 Elongation factor G, domain IV CDC40_RS01725 PF00535 Glycosyl transferase family 2 CDC40_RS01735 PF00155 Aminotransferase class I and II CDC40_RS01750 PF00885 6,7-dimethyl-8-ribityllumazine synthase CDC40_RS01760 PF05690 Thiazole biosynthesis protein ThiG CDC40_RS01775 PF00814 Glycoprotease family CDC40_RS01785 PF00149 Calcineurin-like phosphoesterase CDC40_RS01795 PF13180 PDZ domain CDC40_RS01800 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDC40_RS01805 PF01926 50S ribosome-binding GTPase CDC40_RS01805 PF07650 KH domain CDC40_RS01810 PF02472 Biopolymer transport protein ExbD/TolR CDC40_RS01815 PF00625 Guanylate kinase CDC40_RS01820 PF00005 ABC transporter CDC40_RS01830 PF05193 Peptidase M16 inactive domain CDC40_RS01830 PF00675 Insulinase (Peptidase family M16) CDC40_RS01835 PF00579 tRNA synthetases class I (W and Y) CDC40_RS01835 PF01479 S4 domain CDC40_RS01840 PF00905 Penicillin binding protein transpeptidase domain CDC40_RS01840 PF00912 Transglycosylase CDC40_RS01845 PF01475 Ferric uptake regulator family CDC40_RS01855 PF02016 LD-carboxypeptidase N-terminal domain CDC40_RS01855 PF17676 LD-carboxypeptidase C-terminal domain CDC40_RS01860 PF00361 Proton-conducting membrane transporter CDC40_RS01865 PF00581 Rhodanese-like domain CDC40_RS01865 PF01206 Sulfurtransferase TusA CDC40_RS01870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDC40_RS01870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDC40_RS01875 PF13193 AMP-binding enzyme C-terminal domain CDC40_RS01875 PF00501 AMP-binding enzyme CDC40_RS01875 PF01553 Acyltransferase CDC40_RS01880 PF00698 Acyl transferase domain CDC40_RS01885 PF00886 Ribosomal protein S16 CDC40_RS01895 PF01165 Ribosomal protein S21 CDC40_RS01900 PF02562 PhoH-like protein CDC40_RS01905 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDC40_RS01905 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDC40_RS01920 PF04485 Phycobilisome degradation protein nblA CDC40_RS01925 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CDC40_RS01925 PF00132 Bacterial transferase hexapeptide (six repeats) CDC40_RS01930 PF01348 Type II intron maturase CDC40_RS01930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDC40_RS01940 PF17871 AAA lid domain CDC40_RS01940 PF00004 ATPase family associated with various cellular activities (AAA) CDC40_RS01940 PF07724 AAA domain (Cdc48 subfamily) CDC40_RS01940 PF02861 Clp amino terminal domain, pathogenicity island component CDC40_RS01940 PF10431 C-terminal, D2-small domain, of ClpB protein CDC40_RS01955 PF00679 Elongation factor G C-terminus CDC40_RS01955 PF00009 Elongation factor Tu GTP binding domain CDC40_RS01955 PF03144 Elongation factor Tu domain 2 CDC40_RS01955 PF06421 GTP-binding protein LepA C-terminus CDC40_RS01965 PF02386 Cation transport protein CDC40_RS01970 PF00180 Isocitrate/isopropylmalate dehydrogenase CDC40_RS01980 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) CDC40_RS01990 PF00075 RNase H CDC40_RS01995 PF00542 Ribosomal protein L7/L12 C-terminal domain CDC40_RS01995 PF16320 Ribosomal protein L7/L12 dimerisation domain CDC40_RS02000 PF00466 Ribosomal protein L10 CDC40_RS02005 PF00687 Ribosomal protein L1p/L10e family CDC40_RS02010 PF00298 Ribosomal protein L11, RNA binding domain CDC40_RS02010 PF03946 Ribosomal protein L11, N-terminal domain CDC40_RS02015 PF00467 KOW motif CDC40_RS02015 PF02357 Transcription termination factor nusG CDC40_RS02040 PF00436 Single-strand binding protein family CDC40_RS02045 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC40_RS02060 PF04715 Anthranilate synthase component I, N terminal region CDC40_RS02060 PF00425 chorismate binding enzyme CDC40_RS02065 PF02361 Cobalt transport protein CDC40_RS02070 PF04012 PspA/IM30 family CDC40_RS02080 PF01523 Putative modulator of DNA gyrase CDC40_RS02085 PF01126 Heme oxygenase CDC40_RS02090 PF14698 Argininosuccinate lyase C-terminal CDC40_RS02090 PF00206 Lyase CDC40_RS02105 PF00990 Diguanylate cyclase, GGDEF domain CDC40_RS02105 PF00563 EAL domain CDC40_RS02105 PF00360 Phytochrome region CDC40_RS02105 PF01590 GAF domain CDC40_RS02110 PF13181 Tetratricopeptide repeat CDC40_RS02110 PF00535 Glycosyl transferase family 2 CDC40_RS02115 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CDC40_RS02115 PF01565 FAD binding domain CDC40_RS02120 PF08245 Mur ligase middle domain CDC40_RS02120 PF02875 Mur ligase family, glutamate ligase domain CDC40_RS02120 PF01225 Mur ligase family, catalytic domain CDC40_RS02135 PF01593 Flavin containing amine oxidoreductase CDC40_RS02145 PF01116 Fructose-bisphosphate aldolase class-II CDC40_RS02170 PF01169 Uncharacterized protein family UPF0016 CDC40_RS02185 PF00534 Glycosyl transferases group 1 CDC40_RS02185 PF13439 Glycosyltransferase Family 4 CDC40_RS02190 PF00231 ATP synthase CDC40_RS02200 PF07282 Putative transposase DNA-binding domain CDC40_RS02200 PF01385 Probable transposase CDC40_RS02200 PF12323 Helix-turn-helix domain CDC40_RS02205 PF01797 Transposase IS200 like CDC40_RS02210 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CDC40_RS02215 PF00999 Sodium/hydrogen exchanger family CDC40_RS02235 PF08402 TOBE domain CDC40_RS02235 PF00005 ABC transporter CDC40_RS02255 PF01016 Ribosomal L27 protein CDC40_RS02260 PF00829 Ribosomal prokaryotic L21 protein CDC40_RS02270 PF02082 Transcriptional regulator CDC40_RS02285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC40_RS02290 PF02570 Precorrin-8X methylmutase CDC40_RS02300 PF01368 DHH family CDC40_RS02300 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CDC40_RS02300 PF17768 RecJ OB domain CDC40_RS02300 PF02272 DHHA1 domain CDC40_RS02305 PF01709 Transcriptional regulator CDC40_RS02310 PF02533 Photosystem II 4 kDa reaction centre component CDC40_RS02315 PF14437 MafB19-like deaminase CDC40_RS02320 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CDC40_RS02325 PF03437 BtpA family CDC40_RS02330 PF01634 ATP phosphoribosyltransferase CDC40_RS02335 PF13393 Histidyl-tRNA synthetase CDC40_RS02340 PF00684 DnaJ central domain CDC40_RS02340 PF01556 DnaJ C terminal domain CDC40_RS02340 PF00226 DnaJ domain CDC40_RS02345 PF01842 ACT domain CDC40_RS02345 PF00551 Formyl transferase CDC40_RS02350 PF17755 UvrA DNA-binding domain CDC40_RS02350 PF17760 UvrA interaction domain CDC40_RS02355 PF00118 TCP-1/cpn60 chaperonin family CDC40_RS02360 PF00166 Chaperonin 10 Kd subunit CDC40_RS02365 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS02370 PF00909 Ammonium Transporter Family CDC40_RS02380 PF02875 Mur ligase family, glutamate ligase domain CDC40_RS02380 PF08245 Mur ligase middle domain CDC40_RS02395 PF01475 Ferric uptake regulator family CDC40_RS02410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS02410 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS02410 PF00672 HAMP domain CDC40_RS02420 PF07465 Photosystem I protein M (PsaM) CDC40_RS02445 PF07549 SecD/SecF GG Motif CDC40_RS02445 PF02355 Protein export membrane protein CDC40_RS02450 PF02355 Protein export membrane protein CDC40_RS02450 PF07549 SecD/SecF GG Motif CDC40_RS02455 PF02780 Transketolase, C-terminal domain CDC40_RS02455 PF02779 Transketolase, pyrimidine binding domain CDC40_RS02455 PF00364 Biotin-requiring enzyme CDC40_RS02470 PF00043 Glutathione S-transferase, C-terminal domain CDC40_RS02470 PF13417 Glutathione S-transferase, N-terminal domain CDC40_RS02480 PF01029 NusB family CDC40_RS02480 PF01189 16S rRNA methyltransferase RsmB/F CDC40_RS02490 PF02617 ATP-dependent Clp protease adaptor protein ClpS CDC40_RS02495 PF00152 tRNA synthetases class II (D, K and N) CDC40_RS02495 PF01336 OB-fold nucleic acid binding domain CDC40_RS02500 PF17941 Polyphosphate kinase C-terminal domain 1 CDC40_RS02500 PF13090 Polyphosphate kinase C-terminal domain 2 CDC40_RS02500 PF02503 Polyphosphate kinase middle domain CDC40_RS02500 PF13089 Polyphosphate kinase N-terminal domain CDC40_RS02505 PF00664 ABC transporter transmembrane region CDC40_RS02505 PF00005 ABC transporter CDC40_RS02510 PF00977 Histidine biosynthesis protein CDC40_RS02525 PF14489 QueF-like protein CDC40_RS02535 PF02469 Fasciclin domain CDC40_RS02540 PF00171 Aldehyde dehydrogenase family CDC40_RS02545 PF00005 ABC transporter CDC40_RS02545 PF06472 ABC transporter transmembrane region 2 CDC40_RS02560 PF04055 Radical SAM superfamily CDC40_RS02565 PF00465 Iron-containing alcohol dehydrogenase CDC40_RS02565 PF00171 Aldehyde dehydrogenase family CDC40_RS02570 PF03099 Biotin/lipoate A/B protein ligase family CDC40_RS02585 PF02445 Quinolinate synthetase A protein CDC40_RS02590 PF01593 Flavin containing amine oxidoreductase CDC40_RS02595 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CDC40_RS02595 PF01502 Phosphoribosyl-AMP cyclohydrolase CDC40_RS02615 PF00733 Asparagine synthase CDC40_RS02615 PF13537 Glutamine amidotransferase domain CDC40_RS02635 PF00535 Glycosyl transferase family 2 CDC40_RS02640 PF01728 FtsJ-like methyltransferase CDC40_RS02645 PF00534 Glycosyl transferases group 1 CDC40_RS02645 PF13439 Glycosyltransferase Family 4 CDC40_RS02720 PF13520 Amino acid permease CDC40_RS02725 PF01797 Transposase IS200 like CDC40_RS02730 PF12323 Helix-turn-helix domain CDC40_RS02730 PF01385 Probable transposase CDC40_RS02730 PF07282 Putative transposase DNA-binding domain CDC40_RS02735 PF06434 Aconitate hydratase 2 N-terminus CDC40_RS02735 PF00330 Aconitase family (aconitate hydratase) CDC40_RS02735 PF11791 Aconitate B N-terminal domain CDC40_RS02745 PF13614 AAA domain CDC40_RS02750 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CDC40_RS02750 PF01409 tRNA synthetases class II core domain (F) CDC40_RS02760 PF01476 LysM domain CDC40_RS02760 PF03734 L,D-transpeptidase catalytic domain CDC40_RS02770 PF01218 Coproporphyrinogen III oxidase CDC40_RS02775 PF05140 ResB-like family CDC40_RS02845 PF11805 Protein of unknown function (DUF3326) CDC40_RS02850 PF13180 PDZ domain CDC40_RS02855 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CDC40_RS02860 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CDC40_RS02865 PF12838 4Fe-4S dicluster domain CDC40_RS02870 PF00146 NADH dehydrogenase CDC40_RS02875 PF01979 Amidohydrolase family CDC40_RS02880 PF01370 NAD dependent epimerase/dehydratase family CDC40_RS02885 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDC40_RS02885 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDC40_RS02885 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDC40_RS02890 PF01351 Ribonuclease HII CDC40_RS02895 PF01588 Putative tRNA binding domain CDC40_RS02895 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDC40_RS02895 PF03483 B3/4 domain CDC40_RS02895 PF03147 Ferredoxin-fold anticodon binding domain CDC40_RS02895 PF03484 tRNA synthetase B5 domain CDC40_RS02900 PF06968 Biotin and Thiamin Synthesis associated domain CDC40_RS02900 PF04055 Radical SAM superfamily CDC40_RS02910 PF12323 Helix-turn-helix domain CDC40_RS02910 PF07282 Putative transposase DNA-binding domain CDC40_RS02910 PF01385 Probable transposase CDC40_RS02915 PF01797 Transposase IS200 like CDC40_RS02925 PF00398 Ribosomal RNA adenine dimethylase CDC40_RS02930 PF03952 Enolase, N-terminal domain CDC40_RS02930 PF00113 Enolase, C-terminal TIM barrel domain CDC40_RS02935 PF00403 Heavy-metal-associated domain CDC40_RS02940 PF01479 S4 domain CDC40_RS02940 PF00849 RNA pseudouridylate synthase CDC40_RS02945 PF00005 ABC transporter CDC40_RS02945 PF00664 ABC transporter transmembrane region CDC40_RS02960 PF00773 RNB domain CDC40_RS02985 PF01751 Toprim domain CDC40_RS02985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS02985 PF00986 DNA gyrase B subunit, carboxyl terminus CDC40_RS02985 PF00204 DNA gyrase B CDC40_RS02995 PF00849 RNA pseudouridylate synthase CDC40_RS03000 PF00529 HlyD membrane-fusion protein of T1SS CDC40_RS03000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDC40_RS03010 PF00005 ABC transporter CDC40_RS03010 PF02687 FtsX-like permease family CDC40_RS03010 PF12704 MacB-like periplasmic core domain CDC40_RS03015 PF10385 RNA polymerase beta subunit external 1 domain CDC40_RS03015 PF04565 RNA polymerase Rpb2, domain 3 CDC40_RS03015 PF04561 RNA polymerase Rpb2, domain 2 CDC40_RS03015 PF04563 RNA polymerase beta subunit CDC40_RS03015 PF00562 RNA polymerase Rpb2, domain 6 CDC40_RS03015 PF04560 RNA polymerase Rpb2, domain 7 CDC40_RS03020 PF04997 RNA polymerase Rpb1, domain 1 CDC40_RS03020 PF00623 RNA polymerase Rpb1, domain 2 CDC40_RS03020 PF04983 RNA polymerase Rpb1, domain 3 CDC40_RS03025 PF04983 RNA polymerase Rpb1, domain 3 CDC40_RS03025 PF05000 RNA polymerase Rpb1, domain 4 CDC40_RS03025 PF04998 RNA polymerase Rpb1, domain 5 CDC40_RS03030 PF01435 Peptidase family M48 CDC40_RS03060 PF16363 GDP-mannose 4,6 dehydratase CDC40_RS03065 PF01370 NAD dependent epimerase/dehydratase family CDC40_RS03090 PF00675 Insulinase (Peptidase family M16) CDC40_RS03090 PF05193 Peptidase M16 inactive domain CDC40_RS03105 PF02397 Bacterial sugar transferase CDC40_RS03120 PF02780 Transketolase, C-terminal domain CDC40_RS03120 PF02779 Transketolase, pyrimidine binding domain CDC40_RS03120 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CDC40_RS03125 PF00109 Beta-ketoacyl synthase, N-terminal domain CDC40_RS03125 PF02801 Beta-ketoacyl synthase, C-terminal domain CDC40_RS03155 PF01385 Probable transposase CDC40_RS03155 PF07282 Putative transposase DNA-binding domain CDC40_RS03155 PF12323 Helix-turn-helix domain CDC40_RS03160 PF01797 Transposase IS200 like CDC40_RS03170 PF02237 Biotin protein ligase C terminal domain CDC40_RS03170 PF03099 Biotin/lipoate A/B protein ligase family CDC40_RS03190 PF02660 Glycerol-3-phosphate acyltransferase CDC40_RS03195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDC40_RS03195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDC40_RS03200 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS03210 PF18073 Rubredoxin metal binding domain CDC40_RS03210 PF06745 KaiC CDC40_RS03215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDC40_RS03235 PF00805 Pentapeptide repeats (8 copies) CDC40_RS03235 PF00069 Protein kinase domain CDC40_RS03265 PF10726 Protein of function (DUF2518) CDC40_RS03280 PF01717 Cobalamin-independent synthase, Catalytic domain CDC40_RS03280 PF08267 Cobalamin-independent synthase, N-terminal domain CDC40_RS03295 PF01613 Flavin reductase like domain CDC40_RS03295 PF00753 Metallo-beta-lactamase superfamily CDC40_RS03300 PF02617 ATP-dependent Clp protease adaptor protein ClpS CDC40_RS03320 PF01612 3'-5' exonuclease CDC40_RS03320 PF00570 HRDC domain CDC40_RS03340 PF01791 DeoC/LacD family aldolase CDC40_RS03350 PF00730 HhH-GPD superfamily base excision DNA repair protein CDC40_RS03350 PF14815 NUDIX domain CDC40_RS03350 PF00633 Helix-hairpin-helix motif CDC40_RS03355 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CDC40_RS03365 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) CDC40_RS03370 PF16166 Chloroplast import apparatus Tic20-like CDC40_RS03380 PF00574 Clp protease CDC40_RS03385 PF10017 Histidine-specific methyltransferase, SAM-dependent CDC40_RS03390 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS03400 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC40_RS03405 PF04760 Translation initiation factor IF-2, N-terminal region CDC40_RS03405 PF11987 Translation-initiation factor 2 CDC40_RS03405 PF00009 Elongation factor Tu GTP binding domain CDC40_RS03410 PF01782 RimM N-terminal domain CDC40_RS03410 PF05239 PRC-barrel domain CDC40_RS03430 PF01008 Initiation factor 2 subunit family CDC40_RS03450 PF00920 Dehydratase family CDC40_RS03455 PF02571 Precorrin-6x reductase CbiJ/CobK CDC40_RS03465 PF00248 Aldo/keto reductase family CDC40_RS03480 PF11780 Protein of unknown function (DUF3318) CDC40_RS03490 PF00421 Photosystem II protein CDC40_RS03495 PF00072 Response regulator receiver domain CDC40_RS03495 PF01627 Hpt domain CDC40_RS03495 PF00486 Transcriptional regulatory protein, C terminal CDC40_RS03500 PF00072 Response regulator receiver domain CDC40_RS03500 PF00486 Transcriptional regulatory protein, C terminal CDC40_RS03505 PF00862 Sucrose synthase CDC40_RS03505 PF00534 Glycosyl transferases group 1 CDC40_RS03515 PF08241 Methyltransferase domain CDC40_RS03515 PF12697 Alpha/beta hydrolase family CDC40_RS03520 PF14306 PUA-like domain CDC40_RS03520 PF01747 ATP-sulfurylase CDC40_RS03525 PF00933 Glycosyl hydrolase family 3 N terminal domain CDC40_RS03525 PF01915 Glycosyl hydrolase family 3 C-terminal domain CDC40_RS03530 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDC40_RS03530 PF00588 SpoU rRNA Methylase family CDC40_RS03535 PF02401 LytB protein CDC40_RS03540 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CDC40_RS03540 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CDC40_RS03540 PF13288 DXP reductoisomerase C-terminal domain CDC40_RS03555 PF01168 Alanine racemase, N-terminal domain CDC40_RS03565 PF01507 Phosphoadenosine phosphosulfate reductase family CDC40_RS03570 PF02091 Glycyl-tRNA synthetase alpha subunit CDC40_RS03575 PF01522 Polysaccharide deacetylase CDC40_RS03585 PF02441 Flavoprotein CDC40_RS03595 PF13460 NAD(P)H-binding CDC40_RS03605 PF00809 Pterin binding enzyme CDC40_RS03605 PF02965 Vitamin B12 dependent methionine synthase, activation domain CDC40_RS03605 PF02607 B12 binding domain CDC40_RS03605 PF02310 B12 binding domain CDC40_RS03605 PF02574 Homocysteine S-methyltransferase CDC40_RS03615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CDC40_RS03625 PF13181 Tetratricopeptide repeat CDC40_RS03625 PF00535 Glycosyl transferase family 2 CDC40_RS03630 PF00072 Response regulator receiver domain CDC40_RS03630 PF00989 PAS fold CDC40_RS03630 PF01627 Hpt domain CDC40_RS03630 PF18415 Histidine kinase receptor ArcB trans-membrane domain CDC40_RS03630 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS03630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS03635 PF04055 Radical SAM superfamily CDC40_RS03645 PF00486 Transcriptional regulatory protein, C terminal CDC40_RS03645 PF00072 Response regulator receiver domain CDC40_RS03655 PF00149 Calcineurin-like phosphoesterase CDC40_RS03660 PF01252 Signal peptidase (SPase) II CDC40_RS03665 PF01883 Iron-sulfur cluster assembly protein CDC40_RS03665 PF10609 NUBPL iron-transfer P-loop NTPase CDC40_RS03670 PF00117 Glutamine amidotransferase class-I CDC40_RS03670 PF02540 NAD synthase CDC40_RS03670 PF00958 GMP synthase C terminal domain CDC40_RS03685 PF06150 ChaB CDC40_RS03690 PF00772 DnaB-like helicase N terminal domain CDC40_RS03690 PF00772 DnaB-like helicase N terminal domain CDC40_RS03690 PF14528 LAGLIDADG-like domain CDC40_RS03690 PF03796 DnaB-like helicase C terminal domain CDC40_RS03690 PF03796 DnaB-like helicase C terminal domain CDC40_RS03690 PF14528 LAGLIDADG-like domain CDC40_RS03695 PF03948 Ribosomal protein L9, C-terminal domain CDC40_RS03695 PF01281 Ribosomal protein L9, N-terminal domain CDC40_RS03700 PF01701 Photosystem I reaction centre subunit IX / PsaJ CDC40_RS03705 PF02507 Photosystem I reaction centre subunit III CDC40_RS03710 PF00211 Adenylate and Guanylate cyclase catalytic domain CDC40_RS03715 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) CDC40_RS03720 PF00890 FAD binding domain CDC40_RS03720 PF02910 Fumarate reductase flavoprotein C-term CDC40_RS03735 PF00796 Photosystem I reaction centre subunit VIII CDC40_RS03740 PF02605 Photosystem I reaction centre subunit XI CDC40_RS03745 PF00899 ThiF family CDC40_RS03745 PF00581 Rhodanese-like domain CDC40_RS03765 PF07282 Putative transposase DNA-binding domain CDC40_RS03765 PF12323 Helix-turn-helix domain CDC40_RS03765 PF01385 Probable transposase CDC40_RS03770 PF01797 Transposase IS200 like CDC40_RS03780 PF03702 Anhydro-N-acetylmuramic acid kinase CDC40_RS03785 PF03853 YjeF-related protein N-terminus CDC40_RS03785 PF01256 Carbohydrate kinase CDC40_RS03790 PF02934 GatB/GatE catalytic domain CDC40_RS03790 PF02637 GatB domain CDC40_RS03795 PF00285 Citrate synthase, C-terminal domain CDC40_RS03800 PF00148 Nitrogenase component 1 type Oxidoreductase CDC40_RS03800 PF08369 Proto-chlorophyllide reductase 57 kD subunit CDC40_RS03810 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDC40_RS03810 PF05221 S-adenosyl-L-homocysteine hydrolase CDC40_RS03815 PF13439 Glycosyltransferase Family 4 CDC40_RS03815 PF00534 Glycosyl transferases group 1 CDC40_RS03835 PF01609 Transposase DDE domain CDC40_RS03840 PF01940 Integral membrane protein DUF92 CDC40_RS03845 PF00950 ABC 3 transport family CDC40_RS03850 PF00091 Tubulin/FtsZ family, GTPase domain CDC40_RS03850 PF12327 FtsZ family, C-terminal domain CDC40_RS03880 PF03186 CobD/Cbib protein CDC40_RS03885 PF07282 Putative transposase DNA-binding domain CDC40_RS03885 PF01385 Probable transposase CDC40_RS03885 PF12323 Helix-turn-helix domain CDC40_RS03910 PF02887 Pyruvate kinase, alpha/beta domain CDC40_RS03910 PF00224 Pyruvate kinase, barrel domain CDC40_RS03915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDC40_RS03920 PF09115 DNA polymerase III, delta subunit, C terminal CDC40_RS03925 PF01743 Poly A polymerase head domain CDC40_RS03925 PF00571 CBS domain CDC40_RS03940 PF01820 D-ala D-ala ligase N-terminus CDC40_RS03940 PF07478 D-ala D-ala ligase C-terminus CDC40_RS03950 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDC40_RS03950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDC40_RS03955 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CDC40_RS03955 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CDC40_RS03965 PF06480 FtsH Extracellular CDC40_RS03965 PF01434 Peptidase family M41 CDC40_RS03965 PF00004 ATPase family associated with various cellular activities (AAA) CDC40_RS03965 PF17862 AAA+ lid domain CDC40_RS03970 PF01523 Putative modulator of DNA gyrase CDC40_RS03975 PF01386 Ribosomal L25p family CDC40_RS03980 PF00709 Adenylosuccinate synthetase CDC40_RS03990 PF01330 RuvA N terminal domain CDC40_RS03990 PF07499 RuvA, C-terminal domain CDC40_RS04005 PF13932 GidA associated domain CDC40_RS04005 PF01134 Glucose inhibited division protein A CDC40_RS04010 PF01774 UreD urease accessory protein CDC40_RS04020 PF00999 Sodium/hydrogen exchanger family CDC40_RS04020 PF02254 TrkA-N domain CDC40_RS04025 PF01471 Putative peptidoglycan binding domain CDC40_RS04025 PF10128 Glucose-6-phosphate dehydrogenase subunit CDC40_RS04030 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CDC40_RS04030 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CDC40_RS04035 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CDC40_RS04075 PF13581 Histidine kinase-like ATPase domain CDC40_RS04080 PF03441 FAD binding domain of DNA photolyase CDC40_RS04080 PF00875 DNA photolyase CDC40_RS04085 PF07689 KaiB domain CDC40_RS04090 PF00437 Type II/IV secretion system protein CDC40_RS04100 PF07690 Major Facilitator Superfamily CDC40_RS04105 PF00005 ABC transporter CDC40_RS04105 PF00664 ABC transporter transmembrane region CDC40_RS04120 PF01965 DJ-1/PfpI family CDC40_RS04125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC40_RS04130 PF01809 Putative membrane protein insertion efficiency factor CDC40_RS04135 PF00850 Histone deacetylase domain CDC40_RS04160 PF00072 Response regulator receiver domain CDC40_RS04165 PF00072 Response regulator receiver domain CDC40_RS04165 PF14332 Domain of unknown function (DUF4388) CDC40_RS04170 PF04966 Carbohydrate-selective porin, OprB family CDC40_RS04170 PF00395 S-layer homology domain CDC40_RS04175 PF04055 Radical SAM superfamily CDC40_RS04180 PF00106 short chain dehydrogenase CDC40_RS04185 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CDC40_RS04185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDC40_RS04190 PF00005 ABC transporter CDC40_RS04190 PF00664 ABC transporter transmembrane region CDC40_RS04195 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CDC40_RS04195 PF00128 Alpha amylase, catalytic domain CDC40_RS04195 PF02806 Alpha amylase, C-terminal all-beta domain CDC40_RS04200 PF01180 Dihydroorotate dehydrogenase CDC40_RS04210 PF00005 ABC transporter CDC40_RS04215 PF00862 Sucrose synthase CDC40_RS04215 PF00534 Glycosyl transferases group 1 CDC40_RS04220 PF02896 PEP-utilising enzyme, TIM barrel domain CDC40_RS04220 PF00391 PEP-utilising enzyme, mobile domain CDC40_RS04220 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDC40_RS04225 PF13291 ACT domain CDC40_RS04225 PF04607 Region found in RelA / SpoT proteins CDC40_RS04225 PF02824 TGS domain CDC40_RS04235 PF00731 AIR carboxylase CDC40_RS04240 PF08331 Domain of unknown function (DUF1730) CDC40_RS04250 PF00072 Response regulator receiver domain CDC40_RS04250 PF00486 Transcriptional regulatory protein, C terminal CDC40_RS04260 PF08501 Shikimate dehydrogenase substrate binding domain CDC40_RS04260 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CDC40_RS04265 PF00543 Nitrogen regulatory protein P-II CDC40_RS04270 PF01138 3' exoribonuclease family, domain 1 CDC40_RS04270 PF03725 3' exoribonuclease family, domain 2 CDC40_RS04280 PF13335 Magnesium chelatase, subunit ChlI C-terminal CDC40_RS04280 PF01078 Magnesium chelatase, subunit ChlI CDC40_RS04290 PF06463 Molybdenum Cofactor Synthesis C CDC40_RS04290 PF04055 Radical SAM superfamily CDC40_RS04295 PF10150 Ribonuclease E/G family CDC40_RS04300 PF04960 Glutaminase CDC40_RS04310 PF02096 60Kd inner membrane protein CDC40_RS04315 PF00825 Ribonuclease P CDC40_RS04320 PF00468 Ribosomal protein L34 CDC40_RS04325 PF00308 Bacterial dnaA protein CDC40_RS04325 PF08299 Bacterial dnaA protein helix-turn-helix CDC40_RS04325 PF11638 DnaA N-terminal domain CDC40_RS04330 PF07282 Putative transposase DNA-binding domain CDC40_RS04330 PF01385 Probable transposase CDC40_RS04330 PF12323 Helix-turn-helix domain CDC40_RS04335 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDC40_RS04365 PF00483 Nucleotidyl transferase CDC40_RS04370 PF03773 Predicted permease CDC40_RS04375 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CDC40_RS04375 PF04055 Radical SAM superfamily CDC40_RS04380 PF00210 Ferritin-like domain CDC40_RS04395 PF04545 Sigma-70, region 4 CDC40_RS04395 PF04539 Sigma-70 region 3 CDC40_RS04395 PF04542 Sigma-70 region 2 CDC40_RS04395 PF00140 Sigma-70 factor, region 1.2 CDC40_RS04405 PF00005 ABC transporter CDC40_RS04410 PF01425 Amidase CDC40_RS04420 PF01926 50S ribosome-binding GTPase CDC40_RS04420 PF12631 MnmE helical domain CDC40_RS04420 PF10396 GTP-binding protein TrmE N-terminus CDC40_RS04440 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC40_RS04450 PF08334 Type II secretion system (T2SS), protein G CDC40_RS04450 PF07963 Prokaryotic N-terminal methylation motif CDC40_RS04460 PF12838 4Fe-4S dicluster domain CDC40_RS04470 PF00535 Glycosyl transferase family 2 CDC40_RS04475 PF02069 Prokaryotic metallothionein CDC40_RS04480 PF01022 Bacterial regulatory protein, arsR family CDC40_RS04485 PF14245 Type IV pilin PilA CDC40_RS04485 PF07963 Prokaryotic N-terminal methylation motif CDC40_RS04495 PF01627 Hpt domain CDC40_RS04495 PF00072 Response regulator receiver domain CDC40_RS04495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS04495 PF01584 CheW-like domain CDC40_RS04500 PF01590 GAF domain CDC40_RS04500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC40_RS04510 PF00072 Response regulator receiver domain CDC40_RS04515 PF00072 Response regulator receiver domain CDC40_RS04520 PF01758 Sodium Bile acid symporter family CDC40_RS04530 PF00005 ABC transporter CDC40_RS04535 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDC40_RS04535 PF00005 ABC transporter CDC40_RS04540 PF02653 Branched-chain amino acid transport system / permease component CDC40_RS04545 PF02653 Branched-chain amino acid transport system / permease component CDC40_RS04555 PF01230 HIT domain CDC40_RS04560 PF04551 GcpE protein CDC40_RS04570 PF01531 Glycosyl transferase family 11 CDC40_RS04575 PF00535 Glycosyl transferase family 2 CDC40_RS04580 PF00535 Glycosyl transferase family 2 CDC40_RS04585 PF01207 Dihydrouridine synthase (Dus) CDC40_RS04590 PF02901 Pyruvate formate lyase-like CDC40_RS04590 PF01228 Glycine radical CDC40_RS04605 PF03193 RsgA GTPase CDC40_RS04615 PF01595 Cyclin M transmembrane N-terminal domain CDC40_RS04615 PF00571 CBS domain CDC40_RS04615 PF03471 Transporter associated domain CDC40_RS04625 PF02597 ThiS family CDC40_RS04630 PF00291 Pyridoxal-phosphate dependent enzyme CDC40_RS04635 PF00547 Urease, gamma subunit CDC40_RS04640 PF01812 5-formyltetrahydrofolate cyclo-ligase family CDC40_RS04645 PF02754 Cysteine-rich domain CDC40_RS04650 PF02772 S-adenosylmethionine synthetase, central domain CDC40_RS04650 PF00438 S-adenosylmethionine synthetase, N-terminal domain CDC40_RS04650 PF02773 S-adenosylmethionine synthetase, C-terminal domain CDC40_RS04670 PF00092 von Willebrand factor type A domain CDC40_RS04680 PF00092 von Willebrand factor type A domain CDC40_RS04695 PF00953 Glycosyl transferase family 4 CDC40_RS04695 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CDC40_RS04700 PF00107 Zinc-binding dehydrogenase CDC40_RS04700 PF08240 Alcohol dehydrogenase GroES-like domain CDC40_RS04705 PF06725 3D domain CDC40_RS04705 PF03562 MltA specific insert domain CDC40_RS04720 PF00121 Triosephosphate isomerase CDC40_RS04730 PF13614 AAA domain CDC40_RS04735 PF00664 ABC transporter transmembrane region CDC40_RS04735 PF00005 ABC transporter CDC40_RS04740 PF10396 GTP-binding protein TrmE N-terminus CDC40_RS04740 PF12631 MnmE helical domain CDC40_RS04740 PF01926 50S ribosome-binding GTPase CDC40_RS04745 PF16639 Apocytochrome F, N-terminal CDC40_RS04745 PF01333 Apocytochrome F, C-terminal CDC40_RS04750 PF00355 Rieske [2Fe-2S] domain CDC40_RS04760 PF00502 Phycobilisome protein CDC40_RS04765 PF00502 Phycobilisome protein CDC40_RS04770 PF01383 CpcD/allophycocyanin linker domain CDC40_RS04775 PF00936 BMC domain CDC40_RS04780 PF00902 Sec-independent protein translocase protein (TatC) CDC40_RS04785 PF00270 DEAD/DEAH box helicase CDC40_RS04785 PF03461 TRCF domain CDC40_RS04785 PF17757 UvrB interaction domain CDC40_RS04785 PF02559 CarD-like/TRCF domain CDC40_RS04785 PF00271 Helicase conserved C-terminal domain CDC40_RS04790 PF07282 Putative transposase DNA-binding domain CDC40_RS04790 PF01385 Probable transposase CDC40_RS04790 PF12323 Helix-turn-helix domain CDC40_RS04795 PF04321 RmlD substrate binding domain CDC40_RS04800 PF03109 ABC1 family CDC40_RS04815 PF00936 BMC domain CDC40_RS04820 PF00936 BMC domain CDC40_RS04825 PF03319 Ethanolamine utilisation protein EutN/carboxysome CDC40_RS04830 PF00101 Ribulose bisphosphate carboxylase, small chain CDC40_RS04830 PF00132 Bacterial transferase hexapeptide (six repeats) CDC40_RS04840 PF01938 TRAM domain CDC40_RS04840 PF05958 tRNA (Uracil-5-)-methyltransferase CDC40_RS04885 PF01464 Transglycosylase SLT domain CDC40_RS04885 PF14718 Soluble lytic murein transglycosylase L domain CDC40_RS04900 PF00155 Aminotransferase class I and II CDC40_RS04905 PF02881 SRP54-type protein, helical bundle domain CDC40_RS04905 PF00448 SRP54-type protein, GTPase domain CDC40_RS04910 PF00459 Inositol monophosphatase family CDC40_RS04915 PF00005 ABC transporter CDC40_RS04915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDC40_RS04920 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS04920 PF00989 PAS fold CDC40_RS04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS04925 PF00360 Phytochrome region CDC40_RS04925 PF00990 Diguanylate cyclase, GGDEF domain CDC40_RS04925 PF01590 GAF domain CDC40_RS04925 PF00563 EAL domain CDC40_RS04935 PF02547 Queuosine biosynthesis protein CDC40_RS04945 PF00795 Carbon-nitrogen hydrolase CDC40_RS04955 PF00561 alpha/beta hydrolase fold CDC40_RS04970 PF12706 Beta-lactamase superfamily domain CDC40_RS04980 PF07282 Putative transposase DNA-binding domain CDC40_RS04980 PF12323 Helix-turn-helix domain CDC40_RS04980 PF01385 Probable transposase CDC40_RS04985 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDC40_RS04985 PF01348 Type II intron maturase CDC40_RS04995 PF00266 Aminotransferase class-V CDC40_RS05005 PF00563 EAL domain CDC40_RS05005 PF00990 Diguanylate cyclase, GGDEF domain CDC40_RS05005 PF03707 Bacterial signalling protein N terminal repeat CDC40_RS05015 PF00330 Aconitase family (aconitate hydratase) CDC40_RS05020 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CDC40_RS05020 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CDC40_RS05025 PF00462 Glutaredoxin CDC40_RS05035 PF00361 Proton-conducting membrane transporter CDC40_RS05040 PF00361 Proton-conducting membrane transporter CDC40_RS05040 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CDC40_RS05040 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CDC40_RS05055 PF02632 BioY family CDC40_RS05060 PF02514 CobN/Magnesium Chelatase CDC40_RS05065 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS05065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS05070 PF01121 Dephospho-CoA kinase CDC40_RS05085 PF04055 Radical SAM superfamily CDC40_RS05095 PF02627 Carboxymuconolactone decarboxylase family CDC40_RS05100 PF00005 ABC transporter CDC40_RS05105 PF05050 Methyltransferase FkbM domain CDC40_RS05110 PF00005 ABC transporter CDC40_RS05125 PF13193 AMP-binding enzyme C-terminal domain CDC40_RS05125 PF00501 AMP-binding enzyme CDC40_RS05125 PF16177 Acetyl-coenzyme A synthetase N-terminus CDC40_RS05135 PF01625 Peptide methionine sulfoxide reductase CDC40_RS05150 PF01202 Shikimate kinase CDC40_RS05155 PF01556 DnaJ C terminal domain CDC40_RS05155 PF00684 DnaJ central domain CDC40_RS05155 PF00226 DnaJ domain CDC40_RS05160 PF10369 Small subunit of acetolactate synthase CDC40_RS05170 PF01926 50S ribosome-binding GTPase CDC40_RS05170 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDC40_RS05175 PF02529 Cytochrome B6-F complex subunit 5 CDC40_RS05180 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDC40_RS05180 PF00672 HAMP domain CDC40_RS05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS05180 PF00072 Response regulator receiver domain CDC40_RS05180 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS05180 PF01627 Hpt domain CDC40_RS05185 PF01722 BolA-like protein CDC40_RS05190 PF00462 Glutaredoxin CDC40_RS05195 PF00011 Hsp20/alpha crystallin family CDC40_RS05215 PF04015 Domain of unknown function (DUF362) CDC40_RS05220 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC40_RS05220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDC40_RS05225 PF01521 Iron-sulphur cluster biosynthesis CDC40_RS05255 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CDC40_RS05265 PF05368 NmrA-like family CDC40_RS05270 PF01513 ATP-NAD kinase CDC40_RS05275 PF00533 BRCA1 C Terminus (BRCT) domain CDC40_RS05275 PF01653 NAD-dependent DNA ligase adenylation domain CDC40_RS05275 PF03120 NAD-dependent DNA ligase OB-fold domain CDC40_RS05275 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CDC40_RS05275 PF12826 Helix-hairpin-helix motif CDC40_RS05305 PF00132 Bacterial transferase hexapeptide (six repeats) CDC40_RS05305 PF06426 Serine acetyltransferase, N-terminal CDC40_RS05310 PF00682 HMGL-like CDC40_RS05310 PF08502 LeuA allosteric (dimerisation) domain CDC40_RS05335 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDC40_RS05335 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CDC40_RS05340 PF02504 Fatty acid synthesis protein CDC40_RS05345 PF00132 Bacterial transferase hexapeptide (six repeats) CDC40_RS05370 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CDC40_RS05380 PF06298 Photosystem II protein Y (PsbY) CDC40_RS05395 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CDC40_RS05395 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CDC40_RS05400 PF03099 Biotin/lipoate A/B protein ligase family CDC40_RS05405 PF04545 Sigma-70, region 4 CDC40_RS05405 PF04539 Sigma-70 region 3 CDC40_RS05405 PF04542 Sigma-70 region 2 CDC40_RS05405 PF00140 Sigma-70 factor, region 1.2 CDC40_RS05415 PF00924 Mechanosensitive ion channel CDC40_RS05415 PF12794 Mechanosensitive ion channel inner membrane domain 1 CDC40_RS05415 PF12795 Mechanosensitive ion channel porin domain CDC40_RS05425 PF03742 PetN CDC40_RS05435 PF03485 Arginyl tRNA synthetase N terminal domain CDC40_RS05435 PF05746 DALR anticodon binding domain CDC40_RS05435 PF00750 tRNA synthetases class I (R) CDC40_RS05445 PF00692 dUTPase CDC40_RS05450 PF10396 GTP-binding protein TrmE N-terminus CDC40_RS05450 PF12631 MnmE helical domain CDC40_RS05450 PF01926 50S ribosome-binding GTPase CDC40_RS05460 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDC40_RS05465 PF01297 Zinc-uptake complex component A periplasmic CDC40_RS05470 PF00005 ABC transporter CDC40_RS05475 PF01916 Deoxyhypusine synthase CDC40_RS05495 PF07282 Putative transposase DNA-binding domain CDC40_RS05495 PF12323 Helix-turn-helix domain CDC40_RS05495 PF01385 Probable transposase CDC40_RS05505 PF03949 Malic enzyme, NAD binding domain CDC40_RS05505 PF00390 Malic enzyme, N-terminal domain CDC40_RS05515 PF00999 Sodium/hydrogen exchanger family CDC40_RS05515 PF03471 Transporter associated domain CDC40_RS05520 PF10693 Protein of unknown function (DUF2499) CDC40_RS05525 PF00107 Zinc-binding dehydrogenase CDC40_RS05525 PF08240 Alcohol dehydrogenase GroES-like domain CDC40_RS05535 PF03808 Glycosyl transferase WecB/TagA/CpsF family CDC40_RS05540 PF00684 DnaJ central domain CDC40_RS05540 PF01556 DnaJ C terminal domain CDC40_RS05540 PF00226 DnaJ domain CDC40_RS05550 PF17782 DprA winged helix domain CDC40_RS05550 PF02481 DNA recombination-mediator protein A CDC40_RS05555 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CDC40_RS05560 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CDC40_RS05565 PF00294 pfkB family carbohydrate kinase CDC40_RS05575 PF02915 Rubrerythrin CDC40_RS05590 PF01738 Dienelactone hydrolase family CDC40_RS05615 PF01891 Cobalt uptake substrate-specific transmembrane region CDC40_RS05625 PF08041 PetM family of cytochrome b6f complex subunit 7 CDC40_RS05640 PF13519 von Willebrand factor type A domain CDC40_RS05640 PF01078 Magnesium chelatase, subunit ChlI CDC40_RS05640 PF17863 AAA lid domain CDC40_RS05645 PF00118 TCP-1/cpn60 chaperonin family CDC40_RS05650 PF00188 Cysteine-rich secretory protein family CDC40_RS05665 PF00696 Amino acid kinase family CDC40_RS05675 PF03572 Peptidase family S41 CDC40_RS05675 PF00595 PDZ domain CDC40_RS05680 PF01545 Cation efflux family CDC40_RS05680 PF16916 Dimerisation domain of Zinc Transporter CDC40_RS05685 PF01494 FAD binding domain CDC40_RS05690 PF01070 FMN-dependent dehydrogenase CDC40_RS05700 PF13230 Glutamine amidotransferases class-II CDC40_RS05715 PF01903 CbiX CDC40_RS05720 PF00682 HMGL-like CDC40_RS05720 PF08502 LeuA allosteric (dimerisation) domain CDC40_RS05730 PF13614 AAA domain CDC40_RS05745 PF12697 Alpha/beta hydrolase family CDC40_RS05750 PF02633 Creatinine amidohydrolase CDC40_RS05765 PF07724 AAA domain (Cdc48 subfamily) CDC40_RS05765 PF10431 C-terminal, D2-small domain, of ClpB protein CDC40_RS05765 PF17871 AAA lid domain CDC40_RS05765 PF02861 Clp amino terminal domain, pathogenicity island component CDC40_RS05765 PF00004 ATPase family associated with various cellular activities (AAA) CDC40_RS05770 PF02392 Ycf4 CDC40_RS05775 PF02468 Photosystem II reaction centre N protein (psbN) CDC40_RS05780 PF00737 Photosystem II 10 kDa phosphoprotein CDC40_RS05785 PF02416 mttA/Hcf106 family CDC40_RS05790 PF01195 Peptidyl-tRNA hydrolase CDC40_RS05795 PF00005 ABC transporter CDC40_RS05795 PF02687 FtsX-like permease family CDC40_RS05795 PF12704 MacB-like periplasmic core domain CDC40_RS05800 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS05825 PF02910 Fumarate reductase flavoprotein C-term CDC40_RS05825 PF00890 FAD binding domain CDC40_RS05835 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CDC40_RS05840 PF07282 Putative transposase DNA-binding domain CDC40_RS05840 PF01385 Probable transposase CDC40_RS05840 PF12323 Helix-turn-helix domain CDC40_RS05845 PF00258 Flavodoxin CDC40_RS05845 PF01613 Flavin reductase like domain CDC40_RS05860 PF01370 NAD dependent epimerase/dehydratase family CDC40_RS05865 PF00521 DNA gyrase/topoisomerase IV, subunit A CDC40_RS05865 PF03989 DNA gyrase C-terminal domain, beta-propeller CDC40_RS05870 PF01645 Conserved region in glutamate synthase CDC40_RS05870 PF00310 Glutamine amidotransferases class-II CDC40_RS05870 PF04898 Glutamate synthase central domain CDC40_RS05870 PF01493 GXGXG motif CDC40_RS05875 PF09308 LuxQ, periplasmic CDC40_RS05875 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS05875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS05875 PF00072 Response regulator receiver domain CDC40_RS05880 PF05194 UreE urease accessory protein, C-terminal domain CDC40_RS05880 PF02814 UreE urease accessory protein, N-terminal domain CDC40_RS05885 PF01730 UreF CDC40_RS05890 PF00994 Probable molybdopterin binding domain CDC40_RS05890 PF03453 MoeA N-terminal region (domain I and II) CDC40_RS05890 PF03454 MoeA C-terminal region (domain IV) CDC40_RS05895 PF06463 Molybdenum Cofactor Synthesis C CDC40_RS05895 PF04055 Radical SAM superfamily CDC40_RS05900 PF12804 MobA-like NTP transferase domain CDC40_RS05900 PF01967 MoaC family CDC40_RS05905 PF02597 ThiS family CDC40_RS05910 PF02391 MoaE protein CDC40_RS05915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC40_RS05915 PF03466 LysR substrate binding domain CDC40_RS05920 PF02885 Glycosyl transferase family, helical bundle domain CDC40_RS05920 PF00591 Glycosyl transferase family, a/b domain CDC40_RS05935 PF01568 Molydopterin dinucleotide binding domain CDC40_RS05935 PF00384 Molybdopterin oxidoreductase CDC40_RS05935 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDC40_RS05940 PF00005 ABC transporter CDC40_RS05945 PF00005 ABC transporter CDC40_RS05950 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS05960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDC40_RS05960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDC40_RS05970 PF00535 Glycosyl transferase family 2 CDC40_RS05985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDC40_RS05990 PF05523 WxcM-like, C-terminal CDC40_RS06015 PF00498 FHA domain CDC40_RS06015 PF01061 ABC-2 type transporter CDC40_RS06015 PF00005 ABC transporter CDC40_RS06025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CDC40_RS06025 PF00476 DNA polymerase family A CDC40_RS06025 PF01612 3'-5' exonuclease CDC40_RS06025 PF01367 5'-3' exonuclease, C-terminal SAM fold CDC40_RS06030 PF05193 Peptidase M16 inactive domain CDC40_RS06030 PF00675 Insulinase (Peptidase family M16) CDC40_RS06035 PF02654 Cobalamin-5-phosphate synthase CDC40_RS06065 PF00155 Aminotransferase class I and II CDC40_RS06070 PF00072 Response regulator receiver domain CDC40_RS06070 PF00486 Transcriptional regulatory protein, C terminal CDC40_RS06075 PF00005 ABC transporter CDC40_RS06075 PF00498 FHA domain CDC40_RS06075 PF01061 ABC-2 type transporter CDC40_RS06080 PF00202 Aminotransferase class-III CDC40_RS06085 PF17975 Ribonucleotide reductase alpha domain CDC40_RS06090 PF00805 Pentapeptide repeats (8 copies) CDC40_RS06090 PF00069 Protein kinase domain CDC40_RS06120 PF11862 Domain of unknown function (DUF3382) CDC40_RS06120 PF02653 Branched-chain amino acid transport system / permease component CDC40_RS06125 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDC40_RS06125 PF00005 ABC transporter CDC40_RS06130 PF10410 DnaB-helicase binding domain of primase CDC40_RS06130 PF08275 DNA primase catalytic core, N-terminal domain CDC40_RS06130 PF01807 CHC2 zinc finger CDC40_RS06135 PF00365 Phosphofructokinase CDC40_RS06140 PF04055 Radical SAM superfamily CDC40_RS06140 PF01938 TRAM domain CDC40_RS06140 PF00919 Uncharacterized protein family UPF0004 CDC40_RS06145 PF01025 GrpE CDC40_RS06155 PF11266 Long-chain fatty aldehyde decarbonylase CDC40_RS06160 PF01488 Shikimate / quinate 5-dehydrogenase CDC40_RS06165 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CDC40_RS06175 PF01227 GTP cyclohydrolase I CDC40_RS06185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDC40_RS06185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC40_RS06200 PF02163 Peptidase family M50 CDC40_RS06200 PF00571 CBS domain CDC40_RS06210 PF01245 Ribosomal protein L19 CDC40_RS06215 PF02545 Maf-like protein CDC40_RS06220 PF00501 AMP-binding enzyme CDC40_RS06230 PF02817 e3 binding domain CDC40_RS06230 PF00364 Biotin-requiring enzyme CDC40_RS06230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDC40_RS06235 PF00005 ABC transporter CDC40_RS06240 PF02638 Glycosyl hydrolase-like 10 CDC40_RS06245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDC40_RS06245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDC40_RS06245 PF00205 Thiamine pyrophosphate enzyme, central domain CDC40_RS06250 PF00364 Biotin-requiring enzyme CDC40_RS06255 PF01132 Elongation factor P (EF-P) OB domain CDC40_RS06255 PF08207 Elongation factor P (EF-P) KOW-like domain CDC40_RS06255 PF09285 Elongation factor P, C-terminal CDC40_RS06260 PF01106 NifU-like domain CDC40_RS06270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDC40_RS06275 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDC40_RS06275 PF01926 50S ribosome-binding GTPase CDC40_RS06290 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CDC40_RS06295 PF00483 Nucleotidyl transferase CDC40_RS06305 PF14495 Cytochrome c-550 domain CDC40_RS06310 PF14495 Cytochrome c-550 domain CDC40_RS06315 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CDC40_RS06320 PF00072 Response regulator receiver domain CDC40_RS06320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CDC40_RS06320 PF00672 HAMP domain CDC40_RS06320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS06320 PF01627 Hpt domain CDC40_RS06320 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS06325 PF01048 Phosphorylase superfamily CDC40_RS06335 PF01250 Ribosomal protein S6 CDC40_RS06340 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDC40_RS06350 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CDC40_RS06355 PF01066 CDP-alcohol phosphatidyltransferase CDC40_RS06365 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CDC40_RS06385 PF09150 Orange carotenoid protein, N-terminal CDC40_RS06400 PF00300 Histidine phosphatase superfamily (branch 1) CDC40_RS06415 PF00486 Transcriptional regulatory protein, C terminal CDC40_RS06415 PF00072 Response regulator receiver domain CDC40_RS06425 PF12323 Helix-turn-helix domain CDC40_RS06425 PF07282 Putative transposase DNA-binding domain CDC40_RS06425 PF01385 Probable transposase CDC40_RS06440 PF01467 Cytidylyltransferase-like CDC40_RS06450 PF14403 Circularly permuted ATP-grasp type 2 CDC40_RS06450 PF04168 A predicted alpha-helical domain with a conserved ER motif. CDC40_RS06460 PF00676 Dehydrogenase E1 component CDC40_RS06470 PF13580 SIS domain CDC40_RS06480 PF07282 Putative transposase DNA-binding domain CDC40_RS06480 PF12323 Helix-turn-helix domain CDC40_RS06480 PF01385 Probable transposase CDC40_RS06490 PF13378 Enolase C-terminal domain-like CDC40_RS06500 PF12323 Helix-turn-helix domain CDC40_RS06500 PF01385 Probable transposase CDC40_RS06500 PF07282 Putative transposase DNA-binding domain CDC40_RS06505 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CDC40_RS06505 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CDC40_RS06510 PF01467 Cytidylyltransferase-like CDC40_RS06520 PF02540 NAD synthase CDC40_RS06520 PF00795 Carbon-nitrogen hydrolase CDC40_RS06525 PF01432 Peptidase family M3 CDC40_RS06530 PF01551 Peptidase family M23 CDC40_RS06535 PF00905 Penicillin binding protein transpeptidase domain CDC40_RS06535 PF03717 Penicillin-binding Protein dimerisation domain CDC40_RS06545 PF00977 Histidine biosynthesis protein CDC40_RS06550 PF09363 XFP C-terminal domain CDC40_RS06550 PF09364 XFP N-terminal domain CDC40_RS06550 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CDC40_RS06555 PF01026 TatD related DNase CDC40_RS06560 PF01649 Ribosomal protein S20 CDC40_RS06565 PF00731 AIR carboxylase CDC40_RS06575 PF00183 Hsp90 protein CDC40_RS06580 PF04055 Radical SAM superfamily CDC40_RS06585 PF03699 Uncharacterised protein family (UPF0182) CDC40_RS06590 PF00578 AhpC/TSA family CDC40_RS06595 PF13181 Tetratricopeptide repeat CDC40_RS06595 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CDC40_RS06605 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS06610 PF00578 AhpC/TSA family CDC40_RS06620 PF10609 NUBPL iron-transfer P-loop NTPase CDC40_RS06625 PF01370 NAD dependent epimerase/dehydratase family CDC40_RS06630 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDC40_RS06630 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDC40_RS06630 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDC40_RS06635 PF13439 Glycosyltransferase Family 4 CDC40_RS06635 PF00534 Glycosyl transferases group 1 CDC40_RS06650 PF00069 Protein kinase domain CDC40_RS06650 PF00805 Pentapeptide repeats (8 copies) CDC40_RS06655 PF03466 LysR substrate binding domain CDC40_RS06655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC40_RS06660 PF00312 Ribosomal protein S15 CDC40_RS06675 PF00990 Diguanylate cyclase, GGDEF domain CDC40_RS06680 PF01383 CpcD/allophycocyanin linker domain CDC40_RS06680 PF00970 Oxidoreductase FAD-binding domain CDC40_RS06680 PF00175 Oxidoreductase NAD-binding domain CDC40_RS06690 PF00425 chorismate binding enzyme CDC40_RS06695 PF01641 SelR domain CDC40_RS06700 PF00672 HAMP domain CDC40_RS06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS06700 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS06700 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB CDC40_RS06700 PF08448 PAS fold CDC40_RS06705 PF04472 Cell division protein SepF CDC40_RS06710 PF14748 Pyrroline-5-carboxylate reductase dimerisation CDC40_RS06710 PF03807 NADP oxidoreductase coenzyme F420-dependent CDC40_RS06720 PF00701 Dihydrodipicolinate synthetase family CDC40_RS06725 PF00753 Metallo-beta-lactamase superfamily CDC40_RS06725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CDC40_RS06725 PF17770 Ribonuclease J C-terminal domain CDC40_RS06735 PF13193 AMP-binding enzyme C-terminal domain CDC40_RS06735 PF00501 AMP-binding enzyme CDC40_RS06755 PF05860 haemagglutination activity domain CDC40_RS06765 PF00689 Cation transporting ATPase, C-terminus CDC40_RS06765 PF00690 Cation transporter/ATPase, N-terminus CDC40_RS06780 PF00291 Pyridoxal-phosphate dependent enzyme CDC40_RS06785 PF00300 Histidine phosphatase superfamily (branch 1) CDC40_RS06805 PF00962 Adenosine/AMP deaminase CDC40_RS06810 PF00694 Aconitase C-terminal domain CDC40_RS06820 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC40_RS06825 PF01380 SIS domain CDC40_RS06835 PF08245 Mur ligase middle domain CDC40_RS06835 PF01225 Mur ligase family, catalytic domain CDC40_RS06835 PF02875 Mur ligase family, glutamate ligase domain CDC40_RS06845 PF02540 NAD synthase CDC40_RS06850 PF05969 Photosystem II complex subunit Ycf12 CDC40_RS06855 PF02272 DHHA1 domain CDC40_RS06855 PF17768 RecJ OB domain CDC40_RS06855 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CDC40_RS06855 PF01368 DHH family CDC40_RS06880 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDC40_RS06880 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDC40_RS06885 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDC40_RS06885 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDC40_RS06895 PF01189 16S rRNA methyltransferase RsmB/F CDC40_RS06895 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CDC40_RS06895 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CDC40_RS06905 PF11897 Protein of unknown function (DUF3417) CDC40_RS06905 PF00343 Carbohydrate phosphorylase CDC40_RS06910 PF01061 ABC-2 type transporter CDC40_RS06910 PF00498 FHA domain CDC40_RS06910 PF00005 ABC transporter CDC40_RS06930 PF00583 Acetyltransferase (GNAT) family CDC40_RS06930 PF13380 CoA binding domain CDC40_RS06930 PF13607 Succinyl-CoA ligase like flavodoxin domain CDC40_RS06935 PF02222 ATP-grasp domain CDC40_RS06935 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CDC40_RS06950 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS06955 PF07282 Putative transposase DNA-binding domain CDC40_RS06955 PF01385 Probable transposase CDC40_RS06955 PF12323 Helix-turn-helix domain CDC40_RS06965 PF01926 50S ribosome-binding GTPase CDC40_RS06970 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CDC40_RS06970 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CDC40_RS06975 PF02341 RbcX protein CDC40_RS06980 PF00101 Ribulose bisphosphate carboxylase, small chain CDC40_RS06985 PF10458 Valyl tRNA synthetase tRNA binding arm CDC40_RS06985 PF00133 tRNA synthetases class I (I, L, M and V) CDC40_RS06985 PF08264 Anticodon-binding domain of tRNA CDC40_RS07005 PF10674 Protein of unknown function (DUF2488) CDC40_RS07010 PF00400 WD domain, G-beta repeat CDC40_RS07020 PF01259 SAICAR synthetase CDC40_RS07025 PF02685 Glucokinase CDC40_RS07040 PF00005 ABC transporter CDC40_RS07040 PF12857 TOBE-like domain CDC40_RS07045 PF00912 Transglycosylase CDC40_RS07045 PF00905 Penicillin binding protein transpeptidase domain CDC40_RS07045 PF17092 Penicillin-binding protein OB-like domain CDC40_RS07050 PF00436 Single-strand binding protein family CDC40_RS07055 PF01385 Probable transposase CDC40_RS07055 PF12323 Helix-turn-helix domain CDC40_RS07055 PF07282 Putative transposase DNA-binding domain CDC40_RS07070 PF17863 AAA lid domain CDC40_RS07070 PF01078 Magnesium chelatase, subunit ChlI CDC40_RS07080 PF05175 Methyltransferase small domain CDC40_RS07085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC40_RS07090 PF04055 Radical SAM superfamily CDC40_RS07100 PF02941 Ferredoxin thioredoxin reductase variable alpha chain CDC40_RS07110 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDC40_RS07110 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDC40_RS07115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDC40_RS07115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDC40_RS07115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDC40_RS07115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDC40_RS07125 PF00809 Pterin binding enzyme CDC40_RS07135 PF02686 Glu-tRNAGln amidotransferase C subunit CDC40_RS07140 PF13176 Tetratricopeptide repeat CDC40_RS07140 PF00515 Tetratricopeptide repeat CDC40_RS07145 PF00582 Universal stress protein family CDC40_RS07165 PF00421 Photosystem II protein CDC40_RS07170 PF01405 Photosystem II reaction centre T protein CDC40_RS07175 PF00300 Histidine phosphatase superfamily (branch 1) CDC40_RS07185 PF00206 Lyase CDC40_RS07185 PF10415 Fumarase C C-terminus CDC40_RS07195 PF00117 Glutamine amidotransferase class-I CDC40_RS07200 PF00498 FHA domain CDC40_RS07210 PF00849 RNA pseudouridylate synthase CDC40_RS07210 PF01479 S4 domain CDC40_RS07215 PF01040 UbiA prenyltransferase family CDC40_RS07220 PF00805 Pentapeptide repeats (8 copies) CDC40_RS07220 PF00069 Protein kinase domain CDC40_RS07225 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit CDC40_RS07225 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits CDC40_RS07230 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits CDC40_RS07235 PF02419 PsbL protein CDC40_RS07240 PF01788 PsbJ CDC40_RS07245 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS07250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CDC40_RS07250 PF14572 Phosphoribosyl synthetase-associated domain CDC40_RS07255 PF02142 MGS-like domain CDC40_RS07255 PF01808 AICARFT/IMPCHase bienzyme CDC40_RS07275 PF00502 Phycobilisome protein CDC40_RS07280 PF02403 Seryl-tRNA synthetase N-terminal domain CDC40_RS07280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDC40_RS07285 PF01225 Mur ligase family, catalytic domain CDC40_RS07285 PF02875 Mur ligase family, glutamate ligase domain CDC40_RS07285 PF08245 Mur ligase middle domain CDC40_RS07300 PF07726 ATPase family associated with various cellular activities (AAA) CDC40_RS07300 PF17863 AAA lid domain CDC40_RS07305 PF06574 FAD synthetase CDC40_RS07305 PF01687 Riboflavin kinase CDC40_RS07310 PF00175 Oxidoreductase NAD-binding domain CDC40_RS07310 PF00970 Oxidoreductase FAD-binding domain CDC40_RS07310 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC40_RS07315 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDC40_RS07315 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDC40_RS07320 PF00156 Phosphoribosyl transferase domain CDC40_RS07330 PF01593 Flavin containing amine oxidoreductase CDC40_RS07345 PF04055 Radical SAM superfamily CDC40_RS07345 PF00919 Uncharacterized protein family UPF0004 CDC40_RS07345 PF18693 TRAM domain CDC40_RS07355 PF06827 Zinc finger found in FPG and IleRS CDC40_RS07355 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CDC40_RS07355 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CDC40_RS07360 PF02427 Photosystem I reaction centre subunit IV / PsaE CDC40_RS07365 PF01740 STAS domain CDC40_RS07370 PF00793 DAHP synthetase I family CDC40_RS07380 PF00005 ABC transporter CDC40_RS07380 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDC40_RS07410 PF02325 YGGT family CDC40_RS07415 PF02086 D12 class N6 adenine-specific DNA methyltransferase CDC40_RS07425 PF01435 Peptidase family M48 CDC40_RS07430 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CDC40_RS07440 PF00421 Photosystem II protein CDC40_RS07445 PF00124 Photosynthetic reaction centre protein CDC40_RS07450 PF02033 Ribosome-binding factor A CDC40_RS07455 PF01925 Sulfite exporter TauE/SafE CDC40_RS07460 PF00581 Rhodanese-like domain CDC40_RS07460 PF11127 Protein of unknown function (DUF2892) CDC40_RS07465 PF00753 Metallo-beta-lactamase superfamily CDC40_RS07470 PF02913 FAD linked oxidases, C-terminal domain CDC40_RS07470 PF01565 FAD binding domain CDC40_RS07475 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDC40_RS07475 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDC40_RS07485 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CDC40_RS07485 PF01266 FAD dependent oxidoreductase CDC40_RS07495 PF00707 Translation initiation factor IF-3, C-terminal domain CDC40_RS07495 PF05198 Translation initiation factor IF-3, N-terminal domain CDC40_RS07500 PF00529 HlyD membrane-fusion protein of T1SS CDC40_RS07500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDC40_RS07505 PF00873 AcrB/AcrD/AcrF family CDC40_RS07510 PF03989 DNA gyrase C-terminal domain, beta-propeller CDC40_RS07510 PF00521 DNA gyrase/topoisomerase IV, subunit A CDC40_RS07515 PF01171 PP-loop family CDC40_RS07515 PF09179 TilS substrate binding domain CDC40_RS07520 PF01578 Cytochrome C assembly protein CDC40_RS07530 PF12419 SNF2 Helicase protein CDC40_RS07530 PF00176 SNF2 family N-terminal domain CDC40_RS07530 PF00271 Helicase conserved C-terminal domain CDC40_RS07535 PF08448 PAS fold CDC40_RS07535 PF00563 EAL domain CDC40_RS07535 PF00990 Diguanylate cyclase, GGDEF domain CDC40_RS07535 PF08447 PAS fold CDC40_RS07540 PF01746 tRNA (Guanine-1)-methyltransferase CDC40_RS07555 PF12323 Helix-turn-helix domain CDC40_RS07555 PF01385 Probable transposase CDC40_RS07555 PF07282 Putative transposase DNA-binding domain CDC40_RS07560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDC40_RS07560 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC40_RS07565 PF00595 PDZ domain CDC40_RS07565 PF03572 Peptidase family S41 CDC40_RS07570 PF01509 TruB family pseudouridylate synthase (N terminal domain) CDC40_RS07580 PF08241 Methyltransferase domain CDC40_RS07585 PF02347 Glycine cleavage system P-protein CDC40_RS07590 PF01654 Cytochrome bd terminal oxidase subunit I CDC40_RS07595 PF02322 Cytochrome bd terminal oxidase subunit II CDC40_RS07600 PF00180 Isocitrate/isopropylmalate dehydrogenase CDC40_RS07615 PF04055 Radical SAM superfamily CDC40_RS07620 PF00936 BMC domain CDC40_RS07630 PF05419 GUN4-like CDC40_RS07630 PF16416 ARM-like repeat domain, GUN4-N terminal CDC40_RS07635 PF00294 pfkB family carbohydrate kinase CDC40_RS07635 PF01467 Cytidylyltransferase-like CDC40_RS07645 PF13439 Glycosyltransferase Family 4 CDC40_RS07650 PF13439 Glycosyltransferase Family 4 CDC40_RS07650 PF00534 Glycosyl transferases group 1 CDC40_RS07660 PF00120 Glutamine synthetase, catalytic domain CDC40_RS07660 PF03951 Glutamine synthetase, beta-Grasp domain CDC40_RS07665 PF01926 50S ribosome-binding GTPase CDC40_RS07665 PF06071 Protein of unknown function (DUF933) CDC40_RS07670 PF01219 Prokaryotic diacylglycerol kinase CDC40_RS07675 PF02130 Uncharacterized protein family UPF0054 CDC40_RS07685 PF01098 Cell cycle protein CDC40_RS07695 PF00459 Inositol monophosphatase family CDC40_RS07700 PF13180 PDZ domain CDC40_RS07710 PF00753 Metallo-beta-lactamase superfamily CDC40_RS07710 PF16123 Hydroxyacylglutathione hydrolase C-terminus CDC40_RS07715 PF00730 HhH-GPD superfamily base excision DNA repair protein CDC40_RS07715 PF00633 Helix-hairpin-helix motif CDC40_RS07720 PF02163 Peptidase family M50 CDC40_RS07720 PF13180 PDZ domain CDC40_RS07725 PF01039 Carboxyl transferase domain CDC40_RS07725 PF17848 Acetyl-coA carboxylase zinc finger domain CDC40_RS07740 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CDC40_RS07740 PF03900 Porphobilinogen deaminase, C-terminal domain CDC40_RS07755 PF00664 ABC transporter transmembrane region CDC40_RS07755 PF00005 ABC transporter CDC40_RS07760 PF13545 Crp-like helix-turn-helix domain CDC40_RS07760 PF00027 Cyclic nucleotide-binding domain CDC40_RS07790 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC40_RS07795 PF00459 Inositol monophosphatase family CDC40_RS07805 PF00672 HAMP domain CDC40_RS07805 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS07805 PF13426 PAS domain CDC40_RS07805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS07810 PF03109 ABC1 family CDC40_RS07825 PF02754 Cysteine-rich domain CDC40_RS07825 PF13183 4Fe-4S dicluster domain CDC40_RS07830 PF01565 FAD binding domain CDC40_RS07835 PF00990 Diguanylate cyclase, GGDEF domain CDC40_RS07835 PF00072 Response regulator receiver domain CDC40_RS07845 PF00795 Carbon-nitrogen hydrolase CDC40_RS07865 PF13545 Crp-like helix-turn-helix domain CDC40_RS07870 PF04715 Anthranilate synthase component I, N terminal region CDC40_RS07870 PF00425 chorismate binding enzyme CDC40_RS07890 PF01327 Polypeptide deformylase CDC40_RS07900 PF01597 Glycine cleavage H-protein CDC40_RS07905 PF02653 Branched-chain amino acid transport system / permease component CDC40_RS07910 PF02541 Ppx/GppA phosphatase family CDC40_RS07920 PF00583 Acetyltransferase (GNAT) family CDC40_RS07925 PF00586 AIR synthase related protein, N-terminal domain CDC40_RS07925 PF02769 AIR synthase related protein, C-terminal domain CDC40_RS07925 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CDC40_RS07930 PF13537 Glutamine amidotransferase domain CDC40_RS07930 PF00156 Phosphoribosyl transferase domain CDC40_RS07935 PF00326 Prolyl oligopeptidase family CDC40_RS07940 PF00677 Lumazine binding domain CDC40_RS07945 PF00889 Elongation factor TS CDC40_RS07950 PF00318 Ribosomal protein S2 CDC40_RS07955 PF13614 AAA domain CDC40_RS07960 PF00005 ABC transporter CDC40_RS07960 PF03459 TOBE domain CDC40_RS07980 PF04012 PspA/IM30 family CDC40_RS07990 PF00355 Rieske [2Fe-2S] domain CDC40_RS07995 PF14870 Photosynthesis system II assembly factor YCF48 CDC40_RS08000 PF00301 Rubredoxin CDC40_RS08005 PF03749 Sugar fermentation stimulation protein RE domain CDC40_RS08005 PF17746 SfsA N-terminal OB domain CDC40_RS08010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDC40_RS08015 PF09367 CpeS-like protein CDC40_RS08020 PF10792 Protein of unknown function (DUF2605) CDC40_RS08040 PF02527 rRNA small subunit methyltransferase G CDC40_RS08050 PF00395 S-layer homology domain CDC40_RS08050 PF04966 Carbohydrate-selective porin, OprB family CDC40_RS08055 PF00633 Helix-hairpin-helix motif CDC40_RS08055 PF04002 RadC-like JAB domain CDC40_RS08060 PF03976 Polyphosphate kinase 2 (PPK2) CDC40_RS08070 PF00171 Aldehyde dehydrogenase family CDC40_RS08075 PF09366 Protein of unknown function (DUF1997) CDC40_RS08080 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS08085 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CDC40_RS08085 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CDC40_RS08090 PF02885 Glycosyl transferase family, helical bundle domain CDC40_RS08090 PF00591 Glycosyl transferase family, a/b domain CDC40_RS08100 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDC40_RS08100 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDC40_RS08120 PF06969 HemN C-terminal domain CDC40_RS08125 PF01126 Heme oxygenase CDC40_RS08130 PF02915 Rubrerythrin CDC40_RS08135 PF11378 Protein of unknown function (DUF3181) CDC40_RS08140 PF02531 PsaD CDC40_RS08150 PF08241 Methyltransferase domain CDC40_RS08155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CDC40_RS08155 PF00925 GTP cyclohydrolase II CDC40_RS08180 PF06508 Queuosine biosynthesis protein QueC CDC40_RS08185 PF00012 Hsp70 protein CDC40_RS08200 PF12794 Mechanosensitive ion channel inner membrane domain 1 CDC40_RS08200 PF12795 Mechanosensitive ion channel porin domain CDC40_RS08200 PF00924 Mechanosensitive ion channel CDC40_RS08205 PF02021 Uncharacterised protein family UPF0102 CDC40_RS08210 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CDC40_RS08210 PF01488 Shikimate / quinate 5-dehydrogenase CDC40_RS08210 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CDC40_RS08230 PF00210 Ferritin-like domain CDC40_RS08235 PF00155 Aminotransferase class I and II CDC40_RS08240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDC40_RS08250 PF00883 Cytosol aminopeptidase family, catalytic domain CDC40_RS08250 PF02789 Cytosol aminopeptidase family, N-terminal domain CDC40_RS08255 PF04452 RNA methyltransferase CDC40_RS08260 PF00164 Ribosomal protein S12/S23 CDC40_RS08265 PF00177 Ribosomal protein S7p/S5e CDC40_RS08270 PF00679 Elongation factor G C-terminus CDC40_RS08270 PF03764 Elongation factor G, domain IV CDC40_RS08270 PF00009 Elongation factor Tu GTP binding domain CDC40_RS08270 PF14492 Elongation Factor G, domain II CDC40_RS08270 PF03144 Elongation factor Tu domain 2 CDC40_RS08275 PF00009 Elongation factor Tu GTP binding domain CDC40_RS08275 PF03143 Elongation factor Tu C-terminal domain CDC40_RS08275 PF03144 Elongation factor Tu domain 2 CDC40_RS08280 PF00338 Ribosomal protein S10p/S20e CDC40_RS08290 PF08459 UvrC Helix-hairpin-helix N-terminal CDC40_RS08290 PF02151 UvrB/uvrC motif CDC40_RS08290 PF12826 Helix-hairpin-helix motif CDC40_RS08290 PF01541 GIY-YIG catalytic domain CDC40_RS08300 PF13085 2Fe-2S iron-sulfur cluster binding domain CDC40_RS08305 PF00762 Ferrochelatase CDC40_RS08310 PF03459 TOBE domain CDC40_RS08310 PF00005 ABC transporter CDC40_RS08310 PF17912 MalK OB fold domain CDC40_RS08315 PF00348 Polyprenyl synthetase CDC40_RS08320 PF03816 Cell envelope-related transcriptional attenuator domain CDC40_RS08325 PF00574 Clp protease CDC40_RS08335 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CDC40_RS08335 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CDC40_RS08340 PF02457 DisA bacterial checkpoint controller nucleotide-binding CDC40_RS08345 PF01255 Putative undecaprenyl diphosphate synthase CDC40_RS08355 PF00288 GHMP kinases N terminal domain CDC40_RS08355 PF08544 GHMP kinases C terminal CDC40_RS08360 PF18579 Rubisco accumulation factor 1 helix turn helix domain CDC40_RS08360 PF18087 Rubisco Assembly chaperone C-terminal domain CDC40_RS08360 PF18578 Rubisco accumulation factor 1 alpha helical domain CDC40_RS08365 PF13614 AAA domain CDC40_RS08375 PF00005 ABC transporter CDC40_RS08385 PF02219 Methylenetetrahydrofolate reductase CDC40_RS08390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDC40_RS08390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDC40_RS08390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDC40_RS08390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDC40_RS08395 PF00294 pfkB family carbohydrate kinase CDC40_RS08395 PF01467 Cytidylyltransferase-like CDC40_RS08400 PF08239 Bacterial SH3 domain CDC40_RS08400 PF01520 N-acetylmuramoyl-L-alanine amidase CDC40_RS08415 PF03600 Citrate transporter CDC40_RS08445 PF01699 Sodium/calcium exchanger protein CDC40_RS08450 PF01385 Probable transposase CDC40_RS08450 PF07282 Putative transposase DNA-binding domain CDC40_RS08450 PF12323 Helix-turn-helix domain CDC40_RS08455 PF11283 Protein of unknown function (DUF3084) CDC40_RS08465 PF01975 Survival protein SurE CDC40_RS08485 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CDC40_RS08490 PF07977 FabA-like domain CDC40_RS08495 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CDC40_RS08495 PF00132 Bacterial transferase hexapeptide (six repeats) CDC40_RS08500 PF00588 SpoU rRNA Methylase family CDC40_RS08510 PF07238 PilZ domain CDC40_RS08510 PF00535 Glycosyl transferase family 2 CDC40_RS08510 PF03552 Cellulose synthase CDC40_RS08515 PF07238 PilZ domain CDC40_RS08515 PF03552 Cellulose synthase CDC40_RS08515 PF00535 Glycosyl transferase family 2 CDC40_RS08525 PF01725 Ham1 family CDC40_RS08535 PF05685 Putative restriction endonuclease CDC40_RS08540 PF00005 ABC transporter CDC40_RS08540 PF09383 NIL domain CDC40_RS08545 PF09587 Bacterial capsule synthesis protein PGA_cap CDC40_RS08550 PF00571 CBS domain CDC40_RS08550 PF01380 SIS domain CDC40_RS08560 PF01343 Peptidase family S49 CDC40_RS08575 PF17810 Arginine decarboxylase helical bundle domain CDC40_RS08575 PF17944 Arginine decarboxylase C-terminal helical extension CDC40_RS08575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CDC40_RS08580 PF00289 Biotin carboxylase, N-terminal domain CDC40_RS08580 PF02785 Biotin carboxylase C-terminal domain CDC40_RS08580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDC40_RS08585 PF04101 Glycosyltransferase family 28 C-terminal domain CDC40_RS08585 PF03033 Glycosyltransferase family 28 N-terminal domain CDC40_RS08590 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDC40_RS08595 PF00586 AIR synthase related protein, N-terminal domain CDC40_RS08595 PF02769 AIR synthase related protein, C-terminal domain CDC40_RS08625 PF00361 Proton-conducting membrane transporter CDC40_RS08635 PF00361 Proton-conducting membrane transporter CDC40_RS08645 PF03881 Fructosamine kinase CDC40_RS08650 PF10502 Signal peptidase, peptidase S26 CDC40_RS08655 PF17806 Sarcosine oxidase A3 domain CDC40_RS08655 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC40_RS08655 PF08669 Glycine cleavage T-protein C-terminal barrel domain CDC40_RS08655 PF01571 Aminomethyltransferase folate-binding domain CDC40_RS08660 PF00205 Thiamine pyrophosphate enzyme, central domain CDC40_RS08660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDC40_RS08660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDC40_RS08665 PF01329 Pterin 4 alpha carbinolamine dehydratase CDC40_RS08670 PF00253 Ribosomal protein S14p/S29e CDC40_RS08675 PF09190 DALR domain CDC40_RS08675 PF01406 tRNA synthetases class I (C) catalytic domain CDC40_RS08685 PF10397 Adenylosuccinate lyase C-terminus CDC40_RS08685 PF00206 Lyase CDC40_RS08695 PF00498 FHA domain CDC40_RS08695 PF00563 EAL domain CDC40_RS08695 PF00990 Diguanylate cyclase, GGDEF domain CDC40_RS08700 PF17862 AAA+ lid domain CDC40_RS08700 PF01434 Peptidase family M41 CDC40_RS08700 PF06480 FtsH Extracellular CDC40_RS08700 PF00004 ATPase family associated with various cellular activities (AAA) CDC40_RS08705 PF01842 ACT domain CDC40_RS08705 PF00696 Amino acid kinase family CDC40_RS08705 PF13840 ACT domain CDC40_RS08710 PF00892 EamA-like transporter family CDC40_RS08720 PF05175 Methyltransferase small domain CDC40_RS08740 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDC40_RS08740 PF02843 Phosphoribosylglycinamide synthetase, C domain CDC40_RS08740 PF02844 Phosphoribosylglycinamide synthetase, N domain CDC40_RS08750 PF00005 ABC transporter CDC40_RS08755 PF02374 Anion-transporting ATPase CDC40_RS08755 PF17886 HSP20-like domain found in ArsA CDC40_RS08760 PF00124 Photosynthetic reaction centre protein CDC40_RS08765 PF00124 Photosynthetic reaction centre protein CDC40_RS08770 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus CDC40_RS08770 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term CDC40_RS08785 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDC40_RS08785 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDC40_RS08790 PF04225 Opacity-associated protein A LysM-like domain CDC40_RS08790 PF01551 Peptidase family M23 CDC40_RS08800 PF01043 SecA preprotein cross-linking domain CDC40_RS08800 PF07516 SecA Wing and Scaffold domain CDC40_RS08800 PF07517 SecA DEAD-like domain CDC40_RS08820 PF12849 PBP superfamily domain CDC40_RS08845 PF00563 EAL domain CDC40_RS08845 PF00990 Diguanylate cyclase, GGDEF domain CDC40_RS08845 PF03707 Bacterial signalling protein N terminal repeat CDC40_RS08855 PF03477 ATP cone domain CDC40_RS08875 PF00072 Response regulator receiver domain CDC40_RS08875 PF00196 Bacterial regulatory proteins, luxR family CDC40_RS08880 PF01276 Orn/Lys/Arg decarboxylase, major domain CDC40_RS08880 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CDC40_RS08885 PF06949 Protein of unknown function (DUF1292) CDC40_RS08900 PF02779 Transketolase, pyrimidine binding domain CDC40_RS08900 PF00456 Transketolase, thiamine diphosphate binding domain CDC40_RS08900 PF02780 Transketolase, C-terminal domain CDC40_RS08905 PF02801 Beta-ketoacyl synthase, C-terminal domain CDC40_RS08905 PF00109 Beta-ketoacyl synthase, N-terminal domain CDC40_RS08910 PF00550 Phosphopantetheine attachment site CDC40_RS08915 PF00773 RNB domain CDC40_RS08915 PF17876 Cold shock domain CDC40_RS08915 PF00575 S1 RNA binding domain CDC40_RS08915 PF08206 Ribonuclease B OB domain CDC40_RS08920 PF00551 Formyl transferase CDC40_RS08920 PF02911 Formyl transferase, C-terminal domain CDC40_RS08930 PF00004 ATPase family associated with various cellular activities (AAA) CDC40_RS08930 PF17862 AAA+ lid domain CDC40_RS08930 PF01434 Peptidase family M41 CDC40_RS08940 PF01555 DNA methylase CDC40_RS08955 PF13368 Topoisomerase C-terminal repeat CDC40_RS08955 PF01131 DNA topoisomerase CDC40_RS08955 PF01751 Toprim domain CDC40_RS08965 PF00719 Inorganic pyrophosphatase CDC40_RS08990 PF13411 MerR HTH family regulatory protein CDC40_RS09005 PF00106 short chain dehydrogenase CDC40_RS09010 PF12697 Alpha/beta hydrolase family CDC40_RS09015 PF01040 UbiA prenyltransferase family CDC40_RS09020 PF02628 Cytochrome oxidase assembly protein CDC40_RS09040 PF03129 Anticodon binding domain CDC40_RS09040 PF13393 Histidyl-tRNA synthetase CDC40_RS09045 PF02463 RecF/RecN/SMC N terminal domain CDC40_RS09055 PF00005 ABC transporter CDC40_RS09060 PF12791 Anti-sigma factor N-terminus CDC40_RS09060 PF00331 Glycosyl hydrolase family 10 CDC40_RS09070 PF00005 ABC transporter CDC40_RS09075 PF01458 Uncharacterized protein family (UPF0051) CDC40_RS09085 PF18331 PKHD-type hydroxylase C-terminal domain CDC40_RS09085 PF13640 2OG-Fe(II) oxygenase superfamily CDC40_RS09095 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS09095 PF16736 Single Cache-like CDC40_RS09095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS09095 PF00989 PAS fold CDC40_RS09100 PF00072 Response regulator receiver domain CDC40_RS09100 PF01627 Hpt domain CDC40_RS09100 PF00486 Transcriptional regulatory protein, C terminal CDC40_RS09105 PF01960 ArgJ family CDC40_RS09110 PF00311 Phosphoenolpyruvate carboxylase CDC40_RS09120 PF00485 Phosphoribulokinase / Uridine kinase family CDC40_RS09125 PF01783 Ribosomal L32p protein family CDC40_RS09150 PF00403 Heavy-metal-associated domain CDC40_RS09170 PF01925 Sulfite exporter TauE/SafE CDC40_RS09175 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC40_RS09180 PF06470 SMC proteins Flexible Hinge Domain CDC40_RS09180 PF02463 RecF/RecN/SMC N terminal domain CDC40_RS09190 PF01668 SmpB protein CDC40_RS09195 PF01081 KDPG and KHG aldolase CDC40_RS09205 PF03552 Cellulose synthase CDC40_RS09205 PF00535 Glycosyl transferase family 2 CDC40_RS09205 PF07238 PilZ domain CDC40_RS09215 PF00202 Aminotransferase class-III CDC40_RS09225 PF13184 NusA-like KH domain CDC40_RS09225 PF08529 NusA N-terminal domain CDC40_RS09225 PF00575 S1 RNA binding domain CDC40_RS09230 PF02576 RimP N-terminal domain CDC40_RS09245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDC40_RS09245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDC40_RS09260 PF01555 DNA methylase CDC40_RS09275 PF02581 Thiamine monophosphate synthase CDC40_RS09275 PF17792 ThiD2 family CDC40_RS09280 PF13847 Methyltransferase domain CDC40_RS09285 PF01571 Aminomethyltransferase folate-binding domain CDC40_RS09295 PF01933 Uncharacterised protein family UPF0052 CDC40_RS09305 PF01209 ubiE/COQ5 methyltransferase family CDC40_RS09320 PF03167 Uracil DNA glycosylase superfamily CDC40_RS09325 PF00502 Phycobilisome protein CDC40_RS09330 PF00502 Phycobilisome protein CDC40_RS09335 PF01383 CpcD/allophycocyanin linker domain CDC40_RS09335 PF00427 Phycobilisome Linker polypeptide CDC40_RS09340 PF01383 CpcD/allophycocyanin linker domain CDC40_RS09345 PF03130 PBS lyase HEAT-like repeat CDC40_RS09350 PF03130 PBS lyase HEAT-like repeat CDC40_RS09355 PF00427 Phycobilisome Linker polypeptide CDC40_RS09360 PF00427 Phycobilisome Linker polypeptide CDC40_RS09365 PF00427 Phycobilisome Linker polypeptide CDC40_RS09375 PF01737 YCF9 CDC40_RS09380 PF00588 SpoU rRNA Methylase family CDC40_RS09380 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDC40_RS09385 PF02540 NAD synthase CDC40_RS09385 PF00958 GMP synthase C terminal domain CDC40_RS09385 PF00117 Glutamine amidotransferase class-I CDC40_RS09390 PF08264 Anticodon-binding domain of tRNA CDC40_RS09390 PF10458 Valyl tRNA synthetase tRNA binding arm CDC40_RS09390 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase CDC40_RS09390 PF00133 tRNA synthetases class I (I, L, M and V) CDC40_RS09395 PF14403 Circularly permuted ATP-grasp type 2 CDC40_RS09405 PF00448 SRP54-type protein, GTPase domain CDC40_RS09405 PF02978 Signal peptide binding domain CDC40_RS09405 PF02881 SRP54-type protein, helical bundle domain CDC40_RS09410 PF09210 Domain of unknown function (DUF1957) CDC40_RS09410 PF03065 Glycosyl hydrolase family 57 CDC40_RS09415 PF01497 Periplasmic binding protein CDC40_RS09425 PF12323 Helix-turn-helix domain CDC40_RS09425 PF01385 Probable transposase CDC40_RS09425 PF07282 Putative transposase DNA-binding domain CDC40_RS09430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDC40_RS09430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDC40_RS09430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDC40_RS09430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDC40_RS09435 PF00149 Calcineurin-like phosphoesterase CDC40_RS09435 PF12320 Type 5 capsule protein repressor C-terminal domain CDC40_RS09455 PF12706 Beta-lactamase superfamily domain CDC40_RS09465 PF02390 Putative methyltransferase CDC40_RS09475 PF00909 Ammonium Transporter Family CDC40_RS09485 PF05173 Dihydrodipicolinate reductase, C-terminus CDC40_RS09485 PF01113 Dihydrodipicolinate reductase, N-terminus CDC40_RS09495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS09505 PF00005 ABC transporter CDC40_RS09520 PF02594 Uncharacterised ACR, YggU family COG1872 CDC40_RS09525 PF01433 Peptidase family M1 domain CDC40_RS09525 PF11838 ERAP1-like C-terminal domain CDC40_RS09530 PF00579 tRNA synthetases class I (W and Y) CDC40_RS09545 PF00563 EAL domain CDC40_RS09545 PF03707 Bacterial signalling protein N terminal repeat CDC40_RS09545 PF00990 Diguanylate cyclase, GGDEF domain CDC40_RS09555 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS09560 PF00005 ABC transporter CDC40_RS09565 PF00005 ABC transporter CDC40_RS09575 PF00005 ABC transporter CDC40_RS09595 PF00510 Cytochrome c oxidase subunit III CDC40_RS09600 PF00115 Cytochrome C and Quinol oxidase polypeptide I CDC40_RS09605 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CDC40_RS09605 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CDC40_RS09615 PF06596 Photosystem II reaction centre X protein (PsbX) CDC40_RS09620 PF07444 Ycf66 protein N-terminus CDC40_RS09630 PF03775 Septum formation inhibitor MinC, C-terminal domain CDC40_RS09635 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDC40_RS09640 PF03776 Septum formation topological specificity factor MinE CDC40_RS09650 PF06838 Methionine gamma-lyase CDC40_RS09655 PF00534 Glycosyl transferases group 1 CDC40_RS09655 PF13579 Glycosyl transferase 4-like domain CDC40_RS09680 PF07085 DRTGG domain CDC40_RS09700 PF01040 UbiA prenyltransferase family CDC40_RS09705 PF04029 2-phosphosulpholactate phosphatase CDC40_RS09715 PF10502 Signal peptidase, peptidase S26 CDC40_RS09730 PF00202 Aminotransferase class-III CDC40_RS09750 PF02080 TrkA-C domain CDC40_RS09750 PF02254 TrkA-N domain CDC40_RS09765 PF17764 3′ DNA-binding domain (3′BD) CDC40_RS09765 PF00271 Helicase conserved C-terminal domain CDC40_RS09765 PF18074 Primosomal protein N C-terminal domain CDC40_RS09765 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CDC40_RS09765 PF00270 DEAD/DEAH box helicase CDC40_RS09770 PF00171 Aldehyde dehydrogenase family CDC40_RS09780 PF00534 Glycosyl transferases group 1 CDC40_RS09780 PF13439 Glycosyltransferase Family 4 CDC40_RS09795 PF03358 NADPH-dependent FMN reductase CDC40_RS09800 PF00490 Delta-aminolevulinic acid dehydratase CDC40_RS09810 PF00557 Metallopeptidase family M24 CDC40_RS09815 PF00875 DNA photolyase CDC40_RS09815 PF03441 FAD binding domain of DNA photolyase CDC40_RS09825 PF01740 STAS domain CDC40_RS09830 PF00636 Ribonuclease III domain CDC40_RS09835 PF12966 N-ATPase, AtpR subunit CDC40_RS09840 PF00119 ATP synthase A chain CDC40_RS09845 PF00137 ATP synthase subunit C CDC40_RS09850 PF00430 ATP synthase B/B' CF(0) CDC40_RS09855 PF00430 ATP synthase B/B' CF(0) CDC40_RS09860 PF00213 ATP synthase delta (OSCP) subunit CDC40_RS09865 PF00306 ATP synthase alpha/beta chain, C terminal domain CDC40_RS09865 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDC40_RS09865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDC40_RS09870 PF00483 Nucleotidyl transferase CDC40_RS09875 PF00989 PAS fold CDC40_RS09875 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS09875 PF00672 HAMP domain CDC40_RS09885 PF00290 Tryptophan synthase alpha chain CDC40_RS09890 PF01098 Cell cycle protein CDC40_RS09895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDC40_RS09895 PF00005 ABC transporter CDC40_RS09900 PF01716 Manganese-stabilising protein / photosystem II polypeptide CDC40_RS09905 PF00069 Protein kinase domain CDC40_RS09910 PF00762 Ferrochelatase CDC40_RS09915 PF10664 Cyanobacterial and plastid NDH-1 subunit M CDC40_RS09925 PF00999 Sodium/hydrogen exchanger family CDC40_RS09930 PF01134 Glucose inhibited division protein A CDC40_RS09935 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CDC40_RS09940 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus CDC40_RS09945 PF02687 FtsX-like permease family CDC40_RS09945 PF18075 FtsX extracellular domain CDC40_RS09950 PF00005 ABC transporter CDC40_RS09960 PF00124 Photosynthetic reaction centre protein CDC40_RS09965 PF12323 Helix-turn-helix domain CDC40_RS09965 PF01385 Probable transposase CDC40_RS09965 PF07282 Putative transposase DNA-binding domain CDC40_RS09975 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CDC40_RS09980 PF00483 Nucleotidyl transferase CDC40_RS09985 PF16363 GDP-mannose 4,6 dehydratase CDC40_RS09990 PF14437 MafB19-like deaminase CDC40_RS09995 PF00842 Alanine racemase, C-terminal domain CDC40_RS09995 PF01168 Alanine racemase, N-terminal domain CDC40_RS10000 PF01177 Asp/Glu/Hydantoin racemase CDC40_RS10005 PF01027 Inhibitor of apoptosis-promoting Bax1 CDC40_RS10010 PF01264 Chorismate synthase CDC40_RS10015 PF01521 Iron-sulphur cluster biosynthesis CDC40_RS10020 PF08338 Domain of unknown function (DUF1731) CDC40_RS10020 PF01370 NAD dependent epimerase/dehydratase family CDC40_RS10030 PF13202 EF hand CDC40_RS10030 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDC40_RS10035 PF07282 Putative transposase DNA-binding domain CDC40_RS10035 PF12323 Helix-turn-helix domain CDC40_RS10035 PF01385 Probable transposase CDC40_RS10040 PF01797 Transposase IS200 like CDC40_RS10055 PF00578 AhpC/TSA family CDC40_RS10075 PF00800 Prephenate dehydratase CDC40_RS10080 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CDC40_RS10080 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CDC40_RS10090 PF04542 Sigma-70 region 2 CDC40_RS10090 PF08281 Sigma-70, region 4 CDC40_RS10100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CDC40_RS10100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CDC40_RS10115 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDC40_RS10115 PF00005 ABC transporter CDC40_RS10125 PF00588 SpoU rRNA Methylase family CDC40_RS10135 PF00392 Bacterial regulatory proteins, gntR family CDC40_RS10140 PF01472 PUA domain CDC40_RS10140 PF00696 Amino acid kinase family CDC40_RS10150 PF00459 Inositol monophosphatase family CDC40_RS10175 PF00361 Proton-conducting membrane transporter CDC40_RS10175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CDC40_RS10175 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CDC40_RS10180 PF00361 Proton-conducting membrane transporter CDC40_RS10190 PF00464 Serine hydroxymethyltransferase CDC40_RS10195 PF00953 Glycosyl transferase family 4 CDC40_RS10200 PF02464 Competence-damaged protein CDC40_RS10200 PF00994 Probable molybdopterin binding domain CDC40_RS10200 PF18146 Damage-inducible protein CinA KH domain CDC40_RS10290 PF02245 Methylpurine-DNA glycosylase (MPG) CDC40_RS10300 PF00226 DnaJ domain CDC40_RS10300 PF01556 DnaJ C terminal domain CDC40_RS10305 PF00012 Hsp70 protein CDC40_RS10315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDC40_RS10315 PF01872 RibD C-terminal domain CDC40_RS10325 PF01476 LysM domain CDC40_RS10325 PF01551 Peptidase family M23 CDC40_RS10325 PF08525 Opacity-associated protein A N-terminal motif CDC40_RS10330 PF02602 Uroporphyrinogen-III synthase HemD CDC40_RS10335 PF06206 CpeT/CpcT family (DUF1001) CDC40_RS10340 PF01790 Prolipoprotein diacylglyceryl transferase CDC40_RS10345 PF00453 Ribosomal protein L20 CDC40_RS10350 PF01632 Ribosomal protein L35 CDC40_RS10360 PF17774 Putative RNA-binding domain in YlmH CDC40_RS10360 PF01479 S4 domain CDC40_RS10375 PF12849 PBP superfamily domain CDC40_RS10380 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS10385 PF00528 Binding-protein-dependent transport system inner membrane component CDC40_RS10390 PF00005 ABC transporter CDC40_RS10400 PF03575 Peptidase family S51 CDC40_RS10405 PF08443 RimK-like ATP-grasp domain CDC40_RS10405 PF02875 Mur ligase family, glutamate ligase domain CDC40_RS10405 PF08245 Mur ligase middle domain CDC40_RS10410 PF05378 Hydantoinase/oxoprolinase N-terminal region CDC40_RS10410 PF01968 Hydantoinase/oxoprolinase CDC40_RS10425 PF01385 Probable transposase CDC40_RS10425 PF12323 Helix-turn-helix domain CDC40_RS10425 PF07282 Putative transposase DNA-binding domain CDC40_RS10430 PF01797 Transposase IS200 like CDC40_RS10435 PF13476 AAA domain CDC40_RS10440 PF00092 von Willebrand factor type A domain CDC40_RS10450 PF00106 short chain dehydrogenase CDC40_RS10455 PF01565 FAD binding domain CDC40_RS10455 PF04030 D-arabinono-1,4-lactone oxidase CDC40_RS10465 PF01040 UbiA prenyltransferase family CDC40_RS10470 PF01145 SPFH domain / Band 7 family CDC40_RS10475 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CDC40_RS10490 PF01914 MarC family integral membrane protein CDC40_RS10495 PF00877 NlpC/P60 family CDC40_RS10500 PF00478 IMP dehydrogenase / GMP reductase domain CDC40_RS10510 PF02092 Glycyl-tRNA synthetase beta subunit CDC40_RS10515 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CDC40_RS10515 PF00575 S1 RNA binding domain CDC40_RS10515 PF01138 3' exoribonuclease family, domain 1 CDC40_RS10515 PF03725 3' exoribonuclease family, domain 2 CDC40_RS10515 PF00013 KH domain CDC40_RS10540 PF01040 UbiA prenyltransferase family CDC40_RS10545 PF17275 Family of unknown function (DUF5340) CDC40_RS10550 PF00583 Acetyltransferase (GNAT) family CDC40_RS10555 PF00881 Nitroreductase family CDC40_RS10560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDC40_RS10560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDC40_RS10560 PF03129 Anticodon binding domain CDC40_RS10565 PF00072 Response regulator receiver domain CDC40_RS10565 PF00486 Transcriptional regulatory protein, C terminal CDC40_RS10570 PF13662 Toprim domain CDC40_RS10570 PF00633 Helix-hairpin-helix motif CDC40_RS10570 PF02132 RecR protein CDC40_RS10575 PF16658 Class II release factor RF3, C-terminal domain CDC40_RS10575 PF00009 Elongation factor Tu GTP binding domain CDC40_RS10580 PF16363 GDP-mannose 4,6 dehydratase CDC40_RS10590 PF00762 Ferrochelatase CDC40_RS10595 PF01062 Bestrophin, RFP-TM, chloride channel CDC40_RS10605 PF01385 Probable transposase CDC40_RS10605 PF07282 Putative transposase DNA-binding domain CDC40_RS10605 PF12323 Helix-turn-helix domain CDC40_RS10630 PF00012 Hsp70 protein CDC40_RS10635 PF00762 Ferrochelatase CDC40_RS10650 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDC40_RS10650 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDC40_RS10665 PF00069 Protein kinase domain CDC40_RS10665 PF03793 PASTA domain CDC40_RS10675 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CDC40_RS10675 PF00132 Bacterial transferase hexapeptide (six repeats) CDC40_RS10680 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CDC40_RS10690 PF18766 SWI2/SNF2 ATPase CDC40_RS10690 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CDC40_RS10690 PF11867 Domain of unknown function (DUF3387) CDC40_RS10720 PF02384 N-6 DNA Methylase CDC40_RS10735 PF11967 Recombination protein O N terminal CDC40_RS10735 PF02565 Recombination protein O C terminal CDC40_RS10745 PF07228 Stage II sporulation protein E (SpoIIE) CDC40_RS10745 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain CDC40_RS10750 PF01797 Transposase IS200 like CDC40_RS10755 PF12323 Helix-turn-helix domain CDC40_RS10755 PF01385 Probable transposase CDC40_RS10755 PF07282 Putative transposase DNA-binding domain CDC40_RS10765 PF05192 MutS domain III CDC40_RS10765 PF00488 MutS domain V CDC40_RS10765 PF05188 MutS domain II CDC40_RS10765 PF05190 MutS family domain IV CDC40_RS10765 PF01624 MutS domain I CDC40_RS10775 PF03109 ABC1 family CDC40_RS10790 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CDC40_RS10845 PF00815 Histidinol dehydrogenase CDC40_RS10855 PF05491 RuvB C-terminal winged helix domain CDC40_RS10855 PF17864 RuvB AAA lid domain CDC40_RS10855 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDC40_RS10860 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CDC40_RS10860 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CDC40_RS10865 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CDC40_RS10875 PF01192 RNA polymerase Rpb6 CDC40_RS10885 PF04055 Radical SAM superfamily CDC40_RS10885 PF18693 TRAM domain CDC40_RS10885 PF00919 Uncharacterized protein family UPF0004 CDC40_RS10890 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CDC40_RS10895 PF00578 AhpC/TSA family CDC40_RS10895 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDC40_RS10905 PF01594 AI-2E family transporter CDC40_RS10915 PF05195 Aminopeptidase P, N-terminal domain CDC40_RS10915 PF00557 Metallopeptidase family M24 CDC40_RS10920 PF00155 Aminotransferase class I and II CDC40_RS10925 PF00216 Bacterial DNA-binding protein CDC40_RS10930 PF00162 Phosphoglycerate kinase CDC40_RS10935 PF00582 Universal stress protein family CDC40_RS10950 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CDC40_RS10955 PF01241 Photosystem I psaG / psaK CDC40_RS10965 PF00391 PEP-utilising enzyme, mobile domain CDC40_RS10965 PF00224 Pyruvate kinase, barrel domain CDC40_RS10965 PF02887 Pyruvate kinase, alpha/beta domain CDC40_RS10970 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDC40_RS10970 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDC40_RS10990 PF00211 Adenylate and Guanylate cyclase catalytic domain CDC40_RS11010 PF14492 Elongation Factor G, domain II CDC40_RS11010 PF03144 Elongation factor Tu domain 2 CDC40_RS11010 PF00009 Elongation factor Tu GTP binding domain CDC40_RS11010 PF00679 Elongation factor G C-terminus CDC40_RS11020 PF03109 ABC1 family CDC40_RS11025 PF00085 Thioredoxin CDC40_RS11030 PF04286 Protein of unknown function (DUF445) CDC40_RS11040 PF01494 FAD binding domain CDC40_RS11050 PF05684 Protein of unknown function (DUF819) CDC40_RS11065 PF01678 Diaminopimelate epimerase CDC40_RS11075 PF01969 Protein of unknown function DUF111 CDC40_RS11105 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC40_RS11115 PF03793 PASTA domain CDC40_RS11115 PF00069 Protein kinase domain CDC40_RS11120 PF04434 SWIM zinc finger CDC40_RS11130 PF02578 Multi-copper polyphenol oxidoreductase laccase CDC40_RS11135 PF05996 Ferredoxin-dependent bilin reductase CDC40_RS11140 PF13249 Squalene-hopene cyclase N-terminal domain CDC40_RS11140 PF13243 Squalene-hopene cyclase C-terminal domain CDC40_RS11145 PF01435 Peptidase family M48 CDC40_RS11150 PF00291 Pyridoxal-phosphate dependent enzyme CDC40_RS11150 PF00571 CBS domain CDC40_RS11165 PF12464 Maltose acetyltransferase CDC40_RS11165 PF00132 Bacterial transferase hexapeptide (six repeats) CDC40_RS11170 PF01209 ubiE/COQ5 methyltransferase family CDC40_RS11200 PF00535 Glycosyl transferase family 2 CDC40_RS11205 PF00535 Glycosyl transferase family 2 CDC40_RS11215 PF00156 Phosphoribosyl transferase domain CDC40_RS11220 PF01797 Transposase IS200 like CDC40_RS11225 PF01385 Probable transposase CDC40_RS11225 PF07282 Putative transposase DNA-binding domain CDC40_RS11225 PF12323 Helix-turn-helix domain CDC40_RS11230 PF04851 Type III restriction enzyme, res subunit CDC40_RS11230 PF00271 Helicase conserved C-terminal domain CDC40_RS11230 PF02151 UvrB/uvrC motif CDC40_RS11230 PF17757 UvrB interaction domain CDC40_RS11230 PF12344 Ultra-violet resistance protein B CDC40_RS11235 PF00502 Phycobilisome protein CDC40_RS11240 PF02542 YgbB family CDC40_RS11250 PF03466 LysR substrate binding domain CDC40_RS11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC40_RS11265 PF02350 UDP-N-acetylglucosamine 2-epimerase CDC40_RS11270 PF02577 Bifunctional nuclease CDC40_RS11280 PF01063 Amino-transferase class IV CDC40_RS11290 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CDC40_RS11295 PF00575 S1 RNA binding domain CDC40_RS11300 PF01741 Large-conductance mechanosensitive channel, MscL CDC40_RS11310 PF02705 K+ potassium transporter CDC40_RS11315 PF00155 Aminotransferase class I and II CDC40_RS11320 PF00465 Iron-containing alcohol dehydrogenase CDC40_RS11325 PF05151 Photosystem II reaction centre M protein (PsbM) CDC40_RS11330 PF05690 Thiazole biosynthesis protein ThiG CDC40_RS11330 PF01266 FAD dependent oxidoreductase CDC40_RS11340 PF02223 Thymidylate kinase CDC40_RS11345 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDC40_RS11345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDC40_RS11345 PF14579 Helix-hairpin-helix motif CDC40_RS11345 PF02811 PHP domain CDC40_RS11345 PF01336 OB-fold nucleic acid binding domain CDC40_RS11355 PF05670 NFACT protein RNA binding domain CDC40_RS11365 PF00471 Ribosomal protein L33 CDC40_RS11370 PF01084 Ribosomal protein S18 CDC40_RS11375 PF01297 Zinc-uptake complex component A periplasmic CDC40_RS11375 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CDC40_RS11380 PF00005 ABC transporter CDC40_RS11395 PF00561 alpha/beta hydrolase fold CDC40_RS11405 PF00266 Aminotransferase class-V CDC40_RS11410 PF14579 Helix-hairpin-helix motif CDC40_RS11410 PF01336 OB-fold nucleic acid binding domain CDC40_RS11410 PF02811 PHP domain CDC40_RS11410 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDC40_RS11410 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDC40_RS11425 PF07282 Putative transposase DNA-binding domain CDC40_RS11425 PF01385 Probable transposase CDC40_RS11425 PF12323 Helix-turn-helix domain CDC40_RS11435 PF01795 MraW methylase family CDC40_RS11445 PF03717 Penicillin-binding Protein dimerisation domain CDC40_RS11445 PF00905 Penicillin binding protein transpeptidase domain CDC40_RS11465 PF06055 Exopolysaccharide synthesis, ExoD CDC40_RS11475 PF00343 Carbohydrate phosphorylase CDC40_RS11485 PF17863 AAA lid domain CDC40_RS11485 PF07726 ATPase family associated with various cellular activities (AAA) CDC40_RS11515 PF00085 Thioredoxin CDC40_RS11525 PF00154 recA bacterial DNA recombination protein CDC40_RS11530 PF00583 Acetyltransferase (GNAT) family CDC40_RS11545 PF01979 Amidohydrolase family CDC40_RS11550 PF00037 4Fe-4S binding domain CDC40_RS11570 PF08264 Anticodon-binding domain of tRNA CDC40_RS11570 PF13603 Leucyl-tRNA synthetase, Domain 2 CDC40_RS11570 PF00133 tRNA synthetases class I (I, L, M and V) CDC40_RS11575 PF00486 Transcriptional regulatory protein, C terminal CDC40_RS11575 PF00072 Response regulator receiver domain CDC40_RS11595 PF02152 Dihydroneopterin aldolase CDC40_RS11600 PF03190 Protein of unknown function, DUF255 CDC40_RS11605 PF01571 Aminomethyltransferase folate-binding domain CDC40_RS11605 PF08669 Glycine cleavage T-protein C-terminal barrel domain CDC40_RS11625 PF01208 Uroporphyrinogen decarboxylase (URO-D) CDC40_RS11640 PF04542 Sigma-70 region 2 CDC40_RS11640 PF04539 Sigma-70 region 3 CDC40_RS11640 PF04545 Sigma-70, region 4 CDC40_RS11645 PF02673 Bacitracin resistance protein BacA CDC40_RS11655 PF00271 Helicase conserved C-terminal domain CDC40_RS11655 PF17191 RecG wedge domain CDC40_RS11655 PF00270 DEAD/DEAH box helicase CDC40_RS11660 PF06480 FtsH Extracellular CDC40_RS11660 PF01434 Peptidase family M41 CDC40_RS11660 PF17862 AAA+ lid domain CDC40_RS11660 PF00004 ATPase family associated with various cellular activities (AAA) CDC40_RS11665 PF05552 Conserved TM helix CDC40_RS11670 PF00223 Photosystem I psaA/psaB protein CDC40_RS11675 PF00223 Photosystem I psaA/psaB protein CDC40_RS11680 PF01042 Endoribonuclease L-PSP CDC40_RS11705 PF00072 Response regulator receiver domain CDC40_RS11705 PF00196 Bacterial regulatory proteins, luxR family CDC40_RS11710 PF02575 YbaB/EbfC DNA-binding family CDC40_RS11720 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CDC40_RS11720 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CDC40_RS11720 PF00361 Proton-conducting membrane transporter CDC40_RS11725 PF00361 Proton-conducting membrane transporter CDC40_RS11735 PF00342 Phosphoglucose isomerase CDC40_RS11745 PF12627 Probable RNA and SrmB- binding site of polymerase A CDC40_RS11745 PF01743 Poly A polymerase head domain CDC40_RS11745 PF13735 tRNA nucleotidyltransferase domain 2 putative CDC40_RS11760 PF00764 Arginosuccinate synthase CDC40_RS11765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDC40_RS11765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDC40_RS11770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDC40_RS11780 PF02446 4-alpha-glucanotransferase CDC40_RS11790 PF10716 NADH dehydrogenase transmembrane subunit CDC40_RS11795 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CDC40_RS11800 PF01112 Asparaginase CDC40_RS11815 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CDC40_RS11820 PF00218 Indole-3-glycerol phosphate synthase CDC40_RS11825 PF13419 Haloacid dehalogenase-like hydrolase CDC40_RS11830 PF02233 NAD(P) transhydrogenase beta subunit CDC40_RS11835 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CDC40_RS11840 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CDC40_RS11840 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CDC40_RS11845 PF00582 Universal stress protein family CDC40_RS11855 PF00664 ABC transporter transmembrane region CDC40_RS11855 PF00005 ABC transporter CDC40_RS11860 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CDC40_RS11860 PF01676 Metalloenzyme superfamily CDC40_RS11865 PF01494 FAD binding domain CDC40_RS11875 PF00472 RF-1 domain CDC40_RS11875 PF03462 PCRF domain CDC40_RS11880 PF00163 Ribosomal protein S4/S9 N-terminal domain CDC40_RS11880 PF01479 S4 domain CDC40_RS11890 PF00654 Voltage gated chloride channel CDC40_RS11895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC40_RS11900 PF01300 Telomere recombination CDC40_RS11905 PF07884 Vitamin K epoxide reductase family CDC40_RS11915 PF03209 PUCC protein CDC40_RS11920 PF07690 Major Facilitator Superfamily CDC40_RS11930 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDC40_RS11945 PF12323 Helix-turn-helix domain CDC40_RS11945 PF01385 Probable transposase CDC40_RS11945 PF07282 Putative transposase DNA-binding domain CDC40_RS11950 PF00475 Imidazoleglycerol-phosphate dehydratase CDC40_RS11955 PF00226 DnaJ domain CDC40_RS11955 PF01556 DnaJ C terminal domain CDC40_RS11955 PF00684 DnaJ central domain CDC40_RS11960 PF01434 Peptidase family M41 CDC40_RS11960 PF06480 FtsH Extracellular CDC40_RS11960 PF17862 AAA+ lid domain CDC40_RS11960 PF00004 ATPase family associated with various cellular activities (AAA) CDC40_RS11970 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDC40_RS11970 PF16582 Middle domain of thiamine pyrophosphate CDC40_RS11970 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDC40_RS11980 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system CDC40_RS12010 PF00437 Type II/IV secretion system protein CDC40_RS12010 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CDC40_RS12015 PF00437 Type II/IV secretion system protein CDC40_RS12020 PF00482 Type II secretion system (T2SS), protein F CDC40_RS12025 PF01556 DnaJ C terminal domain CDC40_RS12025 PF00226 DnaJ domain CDC40_RS12040 PF00266 Aminotransferase class-V CDC40_RS12045 PF01348 Type II intron maturase CDC40_RS12045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDC40_RS12050 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain CDC40_RS12060 PF04371 Porphyromonas-type peptidyl-arginine deiminase CDC40_RS12065 PF01197 Ribosomal protein L31 CDC40_RS12070 PF00380 Ribosomal protein S9/S16 CDC40_RS12075 PF00572 Ribosomal protein L13 CDC40_RS12080 PF01416 tRNA pseudouridine synthase CDC40_RS12085 PF01196 Ribosomal protein L17 CDC40_RS12090 PF01000 RNA polymerase Rpb3/RpoA insert domain CDC40_RS12090 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CDC40_RS12090 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CDC40_RS12095 PF00411 Ribosomal protein S11 CDC40_RS12100 PF00416 Ribosomal protein S13/S18 CDC40_RS12105 PF00444 Ribosomal protein L36 CDC40_RS12110 PF01176 Translation initiation factor 1A / IF-1 CDC40_RS12120 PF00344 SecY translocase CDC40_RS12125 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CDC40_RS12130 PF03719 Ribosomal protein S5, C-terminal domain CDC40_RS12130 PF00333 Ribosomal protein S5, N-terminal domain CDC40_RS12135 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CDC40_RS12140 PF00347 Ribosomal protein L6 CDC40_RS12145 PF00410 Ribosomal protein S8 CDC40_RS12150 PF00673 ribosomal L5P family C-terminus CDC40_RS12150 PF00281 Ribosomal protein L5 CDC40_RS12155 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CDC40_RS12155 PF00467 KOW motif CDC40_RS12160 PF00238 Ribosomal protein L14p/L23e CDC40_RS12165 PF00366 Ribosomal protein S17 CDC40_RS12170 PF00831 Ribosomal L29 protein CDC40_RS12175 PF00252 Ribosomal protein L16p/L10e CDC40_RS12180 PF00189 Ribosomal protein S3, C-terminal domain CDC40_RS12180 PF07650 KH domain CDC40_RS12185 PF00237 Ribosomal protein L22p/L17e CDC40_RS12190 PF00203 Ribosomal protein S19 CDC40_RS12195 PF03947 Ribosomal Proteins L2, C-terminal domain CDC40_RS12195 PF00181 Ribosomal Proteins L2, RNA binding domain CDC40_RS12200 PF00276 Ribosomal protein L23 CDC40_RS12205 PF00573 Ribosomal protein L4/L1 family CDC40_RS12210 PF00297 Ribosomal protein L3 CDC40_RS12215 PF01702 Queuine tRNA-ribosyltransferase CDC40_RS12235 PF00004 ATPase family associated with various cellular activities (AAA) CDC40_RS12235 PF01434 Peptidase family M41 CDC40_RS12235 PF17862 AAA+ lid domain CDC40_RS12250 PF08245 Mur ligase middle domain CDC40_RS12250 PF02875 Mur ligase family, glutamate ligase domain CDC40_RS12255 PF01594 AI-2E family transporter CDC40_RS12270 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDC40_RS12270 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDC40_RS12275 PF00480 ROK family CDC40_RS12280 PF03816 Cell envelope-related transcriptional attenuator domain CDC40_RS12285 PF01926 50S ribosome-binding GTPase CDC40_RS12285 PF01018 GTP1/OBG CDC40_RS12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC40_RS12295 PF00512 His Kinase A (phospho-acceptor) domain CDC40_RS12295 PF00989 PAS fold CDC40_RS12295 PF16736 Single Cache-like CDC40_RS12300 PF03023 Lipid II flippase MurJ CDC40_RS12305 PF02768 DNA polymerase III beta subunit, C-terminal domain CDC40_RS12305 PF00712 DNA polymerase III beta subunit, N-terminal domain CDC40_RS12305 PF02767 DNA polymerase III beta subunit, central domain CDC40_RS12315 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CDC40_RS12320 PF17265 Family of unknown function (DUF5331) CDC40_RS12325 PF00148 Nitrogenase component 1 type Oxidoreductase CDC40_RS12330 PF03958 Bacterial type II/III secretion system short domain CDC40_RS12330 PF00263 Bacterial type II and III secretion system protein CDC40_RS12330 PF07660 Secretin and TonB N terminus short domain CDC40_RS12330 PF11741 AMIN domain CDC40_RS12350 PF00871 Acetokinase family CDC40_RS12360 PF00156 Phosphoribosyl transferase domain CDC40_RS12365 PF00860 Permease family CDC40_RS12390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDC40_RS12390 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDC40_RS12390 PF02142 MGS-like domain CDC40_RS12395 PF04025 Domain of unknown function (DUF370) CDC40_RS12400 PF06827 Zinc finger found in FPG and IleRS CDC40_RS12400 PF08264 Anticodon-binding domain of tRNA CDC40_RS12400 PF00133 tRNA synthetases class I (I, L, M and V) CDC40_RS12405 PF03652 Holliday junction resolvase CDC40_RS12415 PF00266 Aminotransferase class-V CDC40_RS12420 PF00551 Formyl transferase CDC40_RS12430 PF04966 Carbohydrate-selective porin, OprB family CDC40_RS12430 PF00395 S-layer homology domain CDC40_RS12435 PF00072 Response regulator receiver domain CDC40_RS12435 PF12452 Protein of unknown function (DUF3685) CDC40_RS12445 PF16363 GDP-mannose 4,6 dehydratase CDC40_RS12450 PF00581 Rhodanese-like domain CDC40_RS12460 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CDC40_RS12475 PF00132 Bacterial transferase hexapeptide (six repeats) CDC40_RS12475 PF12804 MobA-like NTP transferase domain CDC40_RS12485 PF08486 Stage II sporulation protein CDC40_RS12495 PF01765 Ribosome recycling factor CDC40_RS12500 PF00696 Amino acid kinase family CDC40_RS12510 PF00072 Response regulator receiver domain CDC40_RS12510 PF00486 Transcriptional regulatory protein, C terminal CDC40_RS12520 PF13614 AAA domain CDC40_RS12525 PF17871 AAA lid domain CDC40_RS12525 PF07724 AAA domain (Cdc48 subfamily) CDC40_RS12525 PF02861 Clp amino terminal domain, pathogenicity island component CDC40_RS12525 PF10431 C-terminal, D2-small domain, of ClpB protein CDC40_RS12525 PF00004 ATPase family associated with various cellular activities (AAA) CDC40_RS12550 PF00378 Enoyl-CoA hydratase/isomerase CDC40_RS12555 PF00580 UvrD/REP helicase N-terminal domain CDC40_RS12555 PF13361 UvrD-like helicase C-terminal domain CDC40_RS12575 PF00830 Ribosomal L28 family CDC40_RS12580 PF01427 D-ala-D-ala dipeptidase CDC40_RS12585 PF13326 Photosystem II Pbs27 CDC40_RS12590 PF08719 Domain of unknown function (DUF1768) CDC40_RS12595 PF01119 DNA mismatch repair protein, C-terminal domain CDC40_RS12595 PF08676 MutL C terminal dimerisation domain CDC40_RS12600 PF02441 Flavoprotein CDC40_RS12600 PF04127 DNA / pantothenate metabolism flavoprotein CDC40_RS12605 PF10742 Protein of unknown function (DUF2555) CDC40_RS12625 PF00488 MutS domain V CDC40_RS12625 PF01713 Smr domain CDC40_RS12630 PF00152 tRNA synthetases class II (D, K and N) CDC40_RS12630 PF01336 OB-fold nucleic acid binding domain CDC40_RS12635 PF00582 Universal stress protein family CDC40_RS12635 PF00999 Sodium/hydrogen exchanger family CDC40_RS12640 PF00291 Pyridoxal-phosphate dependent enzyme CDC40_RS12650 PF00475 Imidazoleglycerol-phosphate dehydratase