locus-tag class description THEMA_RS00005 PF00308 Bacterial dnaA protein THEMA_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix THEMA_RS00005 PF11638 DnaA N-terminal domain THEMA_RS00010 PF02390 Putative methyltransferase THEMA_RS00025 PF03853 YjeF-related protein N-terminus THEMA_RS00025 PF01256 Carbohydrate kinase THEMA_RS00035 PF00465 Iron-containing alcohol dehydrogenase THEMA_RS00045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_RS00050 PF01384 Phosphate transporter family THEMA_RS00060 PF01351 Ribonuclease HII THEMA_RS00065 PF01865 Protein of unknown function DUF47 THEMA_RS00070 PF03819 MazG nucleotide pyrophosphohydrolase domain THEMA_RS00075 PF13145 PPIC-type PPIASE domain THEMA_RS00080 PF01008 Initiation factor 2 subunit family THEMA_RS00085 PF01311 Bacterial export proteins, family 1 THEMA_RS00090 PF01312 FlhB HrpN YscU SpaS Family THEMA_RS00095 PF00771 FHIPEP family THEMA_RS00100 PF00448 SRP54-type protein, GTPase domain THEMA_RS00105 PF10609 NUBPL iron-transfer P-loop NTPase THEMA_RS00115 PF04509 CheC-like family THEMA_RS00120 PF03975 CheD chemotactic sensory transduction THEMA_RS00125 PF04539 Sigma-70 region 3 THEMA_RS00125 PF04545 Sigma-70, region 4 THEMA_RS00125 PF04542 Sigma-70 region 2 THEMA_RS00150 PF04232 Stage V sporulation protein S (SpoVS) THEMA_RS00155 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain THEMA_RS00155 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain THEMA_RS00160 PF08323 Starch synthase catalytic domain THEMA_RS00160 PF00534 Glycosyl transferases group 1 THEMA_RS00170 PF02673 Bacitracin resistance protein BacA THEMA_RS00175 PF00571 CBS domain THEMA_RS00175 PF01769 Divalent cation transporter THEMA_RS00175 PF03448 MgtE intracellular N domain THEMA_RS00180 PF04551 GcpE protein THEMA_RS00185 PF02163 Peptidase family M50 THEMA_RS00185 PF17820 PDZ domain THEMA_RS00190 PF13288 DXP reductoisomerase C-terminal domain THEMA_RS00190 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase THEMA_RS00190 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain THEMA_RS00200 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain THEMA_RS00200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain THEMA_RS00205 PF00912 Transglycosylase THEMA_RS00205 PF00905 Penicillin binding protein transpeptidase domain THEMA_RS00220 PF03309 Type III pantothenate kinase THEMA_RS00225 PF01053 Cys/Met metabolism PLP-dependent enzyme THEMA_RS00230 PF04204 Homoserine O-succinyltransferase THEMA_RS00235 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit THEMA_RS00245 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg THEMA_RS00245 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II THEMA_RS00245 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase THEMA_RS00250 PF00113 Enolase, C-terminal TIM barrel domain THEMA_RS00250 PF03952 Enolase, N-terminal domain THEMA_RS00255 PF01545 Cation efflux family THEMA_RS00255 PF16916 Dimerisation domain of Zinc Transporter THEMA_RS00265 PF00814 Glycoprotease family THEMA_RS00270 PF00004 ATPase family associated with various cellular activities (AAA) THEMA_RS00270 PF07724 AAA domain (Cdc48 subfamily) THEMA_RS00270 PF02861 Clp amino terminal domain, pathogenicity island component THEMA_RS00270 PF17871 AAA lid domain THEMA_RS00270 PF10431 C-terminal, D2-small domain, of ClpB protein THEMA_RS00275 PF01795 MraW methylase family THEMA_RS00285 PF03793 PASTA domain THEMA_RS00285 PF03717 Penicillin-binding Protein dimerisation domain THEMA_RS00285 PF00905 Penicillin binding protein transpeptidase domain THEMA_RS00290 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_RS00295 PF13192 Thioredoxin domain THEMA_RS00295 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_RS00305 PF01145 SPFH domain / Band 7 family THEMA_RS00315 PF00753 Metallo-beta-lactamase superfamily THEMA_RS00315 PF12706 Beta-lactamase superfamily domain THEMA_RS00320 PF03948 Ribosomal protein L9, C-terminal domain THEMA_RS00320 PF01281 Ribosomal protein L9, N-terminal domain THEMA_RS00325 PF00483 Nucleotidyl transferase THEMA_RS00330 PF02355 Protein export membrane protein THEMA_RS00330 PF07549 SecD/SecF GG Motif THEMA_RS00335 PF02355 Protein export membrane protein THEMA_RS00335 PF07549 SecD/SecF GG Motif THEMA_RS00340 PF02699 Preprotein translocase subunit THEMA_RS00350 PF01687 Riboflavin kinase THEMA_RS00350 PF06574 FAD synthetase THEMA_RS00355 PF16198 tRNA pseudouridylate synthase B C-terminal domain THEMA_RS00355 PF01472 PUA domain THEMA_RS00355 PF01509 TruB family pseudouridylate synthase (N terminal domain) THEMA_RS00360 PF02033 Ribosome-binding factor A THEMA_RS00365 PF08668 HDOD domain THEMA_RS00370 PF14827 Double sensory domain of two-component sensor kinase THEMA_RS00370 PF00672 HAMP domain THEMA_RS00370 PF00512 His Kinase A (phospho-acceptor) domain THEMA_RS00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_RS00370 PF13426 PAS domain THEMA_RS00375 PF03481 Putative GTP-binding controlling metal-binding THEMA_RS00375 PF01300 Telomere recombination THEMA_RS00385 PF01628 HrcA protein C terminal domain THEMA_RS00390 PF01025 GrpE THEMA_RS00395 PF01556 DnaJ C terminal domain THEMA_RS00395 PF00684 DnaJ central domain THEMA_RS00395 PF00226 DnaJ domain THEMA_RS00400 PF01926 50S ribosome-binding GTPase THEMA_RS00405 PF07650 KH domain THEMA_RS00405 PF01926 50S ribosome-binding GTPase THEMA_RS00410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THEMA_RS00415 PF00571 CBS domain THEMA_RS00415 PF03471 Transporter associated domain THEMA_RS00420 PF02590 Predicted SPOUT methyltransferase THEMA_RS00425 PF02971 Formiminotransferase domain THEMA_RS00425 PF07837 Formiminotransferase domain, N-terminal subdomain THEMA_RS00430 PF00072 Response regulator receiver domain THEMA_RS00445 PF01098 Cell cycle protein THEMA_RS00455 PF00437 Type II/IV secretion system protein THEMA_RS00460 PF00091 Tubulin/FtsZ family, GTPase domain THEMA_RS00460 PF12327 FtsZ family, C-terminal domain THEMA_RS00465 PF02491 SHS2 domain inserted in FTSA THEMA_RS00465 PF11983 Membrane-attachment and polymerisation-promoting switch THEMA_RS00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_RS00475 PF00204 DNA gyrase B THEMA_RS00475 PF00986 DNA gyrase B subunit, carboxyl terminus THEMA_RS00475 PF01751 Toprim domain THEMA_RS00485 PF01063 Amino-transferase class IV THEMA_RS00490 PF04055 Radical SAM superfamily THEMA_RS00490 PF00919 Uncharacterized protein family UPF0004 THEMA_RS00500 PF00294 pfkB family carbohydrate kinase THEMA_RS00505 PF08402 TOBE domain THEMA_RS00505 PF00005 ABC transporter THEMA_RS00515 PF04055 Radical SAM superfamily THEMA_RS00515 PF06463 Molybdenum Cofactor Synthesis C THEMA_RS00525 PF00440 Bacterial regulatory proteins, tetR family THEMA_RS00525 PF18665 Tetracyclin repressor-like, C-terminal domain THEMA_RS00530 PF03147 Ferredoxin-fold anticodon binding domain THEMA_RS00530 PF03484 tRNA synthetase B5 domain THEMA_RS00530 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain THEMA_RS00530 PF03483 B3/4 domain THEMA_RS00530 PF01588 Putative tRNA binding domain THEMA_RS00535 PF01409 tRNA synthetases class II core domain (F) THEMA_RS00535 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain THEMA_RS00545 PF00465 Iron-containing alcohol dehydrogenase THEMA_RS00550 PF00860 Permease family THEMA_RS00555 PF03808 Glycosyl transferase WecB/TagA/CpsF family THEMA_RS00575 PF01554 MatE THEMA_RS00580 PF01979 Amidohydrolase family THEMA_RS00585 PF01380 SIS domain THEMA_RS00590 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS00595 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS00600 PF01547 Bacterial extracellular solute-binding protein THEMA_RS00605 PF00933 Glycosyl hydrolase family 3 N terminal domain THEMA_RS00610 PF00480 ROK family THEMA_RS00615 PF10417 C-terminal domain of 1-Cys peroxiredoxin THEMA_RS00615 PF00578 AhpC/TSA family THEMA_RS00625 PF00953 Glycosyl transferase family 4 THEMA_RS00630 PF02811 PHP domain THEMA_RS00635 PF00117 Glutamine amidotransferase class-I THEMA_RS00635 PF06418 CTP synthase N-terminus THEMA_RS00640 PF02801 Beta-ketoacyl synthase, C-terminal domain THEMA_RS00640 PF00109 Beta-ketoacyl synthase, N-terminal domain THEMA_RS00645 PF07977 FabA-like domain THEMA_RS00650 PF03060 Nitronate monooxygenase THEMA_RS00655 PF02632 BioY family THEMA_RS00660 PF00698 Acyl transferase domain THEMA_RS00665 PF04029 2-phosphosulpholactate phosphatase THEMA_RS00685 PF00005 ABC transporter THEMA_RS00690 PF02592 Putative vitamin uptake transporter THEMA_RS00695 PF14489 QueF-like protein THEMA_RS00700 PF08543 Phosphomethylpyrimidine kinase THEMA_RS00700 PF10120 Thiamine-phosphate synthase THEMA_RS00710 PF01964 Radical SAM ThiC family THEMA_RS00725 PF04454 Encapsulating protein for peroxidase THEMA_RS00750 PF00578 AhpC/TSA family THEMA_RS00775 PF11987 Translation-initiation factor 2 THEMA_RS00775 PF04760 Translation initiation factor IF-2, N-terminal region THEMA_RS00775 PF00009 Elongation factor Tu GTP binding domain THEMA_RS00785 PF11146 Protein of unknown function (DUF2905) THEMA_RS00790 PF04468 PSP1 C-terminal conserved region THEMA_RS00795 PF09115 DNA polymerase III, delta subunit, C terminal THEMA_RS00800 PF00919 Uncharacterized protein family UPF0004 THEMA_RS00800 PF18693 TRAM domain THEMA_RS00800 PF04055 Radical SAM superfamily THEMA_RS00805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THEMA_RS00805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THEMA_RS00805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THEMA_RS00805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THEMA_RS00810 PF01926 50S ribosome-binding GTPase THEMA_RS00815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THEMA_RS00815 PF02806 Alpha amylase, C-terminal all-beta domain THEMA_RS00815 PF00128 Alpha amylase, catalytic domain THEMA_RS00820 PF00392 Bacterial regulatory proteins, gntR family THEMA_RS00820 PF07702 UTRA domain THEMA_RS00825 PF00005 ABC transporter THEMA_RS00835 PF01906 Putative heavy-metal-binding THEMA_RS00840 PF00318 Ribosomal protein S2 THEMA_RS00860 PF00669 Bacterial flagellin N-terminal helical region THEMA_RS00860 PF00700 Bacterial flagellin C-terminal helical region THEMA_RS00865 PF13181 Tetratricopeptide repeat THEMA_RS00865 PF00535 Glycosyl transferase family 2 THEMA_RS00870 PF00535 Glycosyl transferase family 2 THEMA_RS00875 PF00258 Flavodoxin THEMA_RS00875 PF00753 Metallo-beta-lactamase superfamily THEMA_RS00880 PF04324 BFD-like [2Fe-2S] binding domain THEMA_RS00880 PF18267 Rubredoxin NAD+ reductase C-terminal domain THEMA_RS00880 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_RS00880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THEMA_RS00885 PF01209 ubiE/COQ5 methyltransferase family THEMA_RS00890 PF11975 Family 4 glycosyl hydrolase C-terminal domain THEMA_RS00890 PF02056 Family 4 glycosyl hydrolase THEMA_RS00900 PF00485 Phosphoribulokinase / Uridine kinase family THEMA_RS00920 PF03572 Peptidase family S41 THEMA_RS00920 PF13180 PDZ domain THEMA_RS00935 PF13439 Glycosyltransferase Family 4 THEMA_RS00935 PF00534 Glycosyl transferases group 1 THEMA_RS00945 PF00149 Calcineurin-like phosphoesterase THEMA_RS00950 PF01467 Cytidylyltransferase-like THEMA_RS00955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THEMA_RS00955 PF02824 TGS domain THEMA_RS00955 PF03129 Anticodon binding domain THEMA_RS00955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THEMA_RS00960 PF01966 HD domain THEMA_RS00975 PF01238 Phosphomannose isomerase type I THEMA_RS00985 PF01134 Glucose inhibited division protein A THEMA_RS01000 PF02677 Epoxyqueuosine reductase QueH THEMA_RS01005 PF02580 D-Tyr-tRNA(Tyr) deacylase THEMA_RS01010 PF13291 ACT domain THEMA_RS01010 PF04607 Region found in RelA / SpoT proteins THEMA_RS01010 PF02824 TGS domain THEMA_RS01025 PF01523 Putative modulator of DNA gyrase THEMA_RS01030 PF01523 Putative modulator of DNA gyrase THEMA_RS01040 PF01699 Sodium/calcium exchanger protein THEMA_RS01050 PF08206 Ribonuclease B OB domain THEMA_RS01050 PF17876 Cold shock domain THEMA_RS01050 PF00773 RNB domain THEMA_RS01050 PF00575 S1 RNA binding domain THEMA_RS01060 PF00464 Serine hydroxymethyltransferase THEMA_RS01065 PF09190 DALR domain THEMA_RS01065 PF01406 tRNA synthetases class I (C) catalytic domain THEMA_RS01070 PF01584 CheW-like domain THEMA_RS01075 PF00364 Biotin-requiring enzyme THEMA_RS01085 PF01039 Carboxyl transferase domain THEMA_RS01090 PF02272 DHHA1 domain THEMA_RS01090 PF01368 DHH family THEMA_RS01090 PF12627 Probable RNA and SrmB- binding site of polymerase A THEMA_RS01090 PF00571 CBS domain THEMA_RS01090 PF01743 Poly A polymerase head domain THEMA_RS01120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THEMA_RS01125 PF03099 Biotin/lipoate A/B protein ligase family THEMA_RS01130 PF02527 rRNA small subunit methyltransferase G THEMA_RS01140 PF00005 ABC transporter THEMA_RS01150 PF18146 Damage-inducible protein CinA KH domain THEMA_RS01150 PF00994 Probable molybdopterin binding domain THEMA_RS01150 PF02464 Competence-damaged protein THEMA_RS01155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_RS01155 PF02895 Signal transducing histidine kinase, homodimeric domain THEMA_RS01155 PF01584 CheW-like domain THEMA_RS01155 PF07194 P2 response regulator binding domain THEMA_RS01155 PF01627 Hpt domain THEMA_RS01160 PF01584 CheW-like domain THEMA_RS01165 PF00072 Response regulator receiver domain THEMA_RS01175 PF00813 FliP family THEMA_RS01190 PF00574 Clp protease THEMA_RS01195 PF05697 Bacterial trigger factor protein (TF) THEMA_RS01195 PF05698 Bacterial trigger factor protein (TF) C-terminus THEMA_RS01205 PF01648 4'-phosphopantetheinyl transferase superfamily THEMA_RS01220 PF00162 Phosphoglycerate kinase THEMA_RS01220 PF00121 Triosephosphate isomerase THEMA_RS01225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain THEMA_RS01225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THEMA_RS01230 PF02575 YbaB/EbfC DNA-binding family THEMA_RS01235 PF12169 DNA polymerase III subunits gamma and tau domain III THEMA_RS01265 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THEMA_RS01265 PF04509 CheC-like family THEMA_RS01270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THEMA_RS01270 PF02154 Flagellar motor switch protein FliM THEMA_RS01280 PF13677 Membrane MotB of proton-channel complex MotA/MotB THEMA_RS01280 PF00691 OmpA family THEMA_RS01285 PF01618 MotA/TolQ/ExbB proton channel family THEMA_RS01290 PF06289 Flagellar and Swarming motility proteins THEMA_RS01295 PF07559 Flagellar basal body protein FlaE THEMA_RS01295 PF00460 Flagella basal body rod protein THEMA_RS01295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEMA_RS01325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THEMA_RS01330 PF01026 TatD related DNase THEMA_RS01335 PF00132 Bacterial transferase hexapeptide (six repeats) THEMA_RS01340 PF00291 Pyridoxal-phosphate dependent enzyme THEMA_RS01355 PF00550 Phosphopantetheine attachment site THEMA_RS01365 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase THEMA_RS01370 PF00301 Rubredoxin THEMA_RS01375 PF01880 Desulfoferrodoxin THEMA_RS01380 PF02915 Rubrerythrin THEMA_RS01385 PF01381 Helix-turn-helix THEMA_RS01390 PF02675 S-adenosylmethionine decarboxylase THEMA_RS01395 PF17284 Spermidine synthase tetramerisation domain THEMA_RS01400 PF04055 Radical SAM superfamily THEMA_RS01400 PF01938 TRAM domain THEMA_RS01400 PF00919 Uncharacterized protein family UPF0004 THEMA_RS01430 PF02542 YgbB family THEMA_RS01440 PF02540 NAD synthase THEMA_RS01450 PF03415 Clostripain family THEMA_RS01460 PF13419 Haloacid dehalogenase-like hydrolase THEMA_RS01470 PF02563 Polysaccharide biosynthesis/export protein THEMA_RS01470 PF18412 Outer-membrane lipoprotein Wza C-terminal domain THEMA_RS01470 PF10531 SLBB domain THEMA_RS01495 PF10135 Rod binding protein THEMA_RS01495 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase THEMA_RS01500 PF02397 Bacterial sugar transferase THEMA_RS01505 PF13477 Glycosyl transferase 4-like THEMA_RS01505 PF00534 Glycosyl transferases group 1 THEMA_RS01510 PF16363 GDP-mannose 4,6 dehydratase THEMA_RS01525 PF13439 Glycosyltransferase Family 4 THEMA_RS01525 PF00534 Glycosyl transferases group 1 THEMA_RS01540 PF00534 Glycosyl transferases group 1 THEMA_RS01540 PF13439 Glycosyltransferase Family 4 THEMA_RS01550 PF13439 Glycosyltransferase Family 4 THEMA_RS01550 PF00534 Glycosyl transferases group 1 THEMA_RS01555 PF00535 Glycosyl transferase family 2 THEMA_RS01555 PF01501 Glycosyl transferase family 8 THEMA_RS01565 PF00534 Glycosyl transferases group 1 THEMA_RS01565 PF13439 Glycosyltransferase Family 4 THEMA_RS01570 PF13086 AAA domain THEMA_RS01570 PF13195 Protein of unknown function (DUF4011) THEMA_RS01570 PF13087 AAA domain THEMA_RS01570 PF13086 AAA domain THEMA_RS01570 PF13195 Protein of unknown function (DUF4011) THEMA_RS01570 PF13087 AAA domain THEMA_RS01610 PF02350 UDP-N-acetylglucosamine 2-epimerase THEMA_RS01625 PF00753 Metallo-beta-lactamase superfamily THEMA_RS01625 PF16123 Hydroxyacylglutathione hydrolase C-terminus THEMA_RS01635 PF01084 Ribosomal protein S18 THEMA_RS01640 PF00436 Single-strand binding protein family THEMA_RS01645 PF01250 Ribosomal protein S6 THEMA_RS01680 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS01690 PF00860 Permease family THEMA_RS01705 PF00005 ABC transporter THEMA_RS01710 PF03717 Penicillin-binding Protein dimerisation domain THEMA_RS01710 PF00905 Penicillin binding protein transpeptidase domain THEMA_RS01730 PF00571 CBS domain THEMA_RS01730 PF01368 DHH family THEMA_RS01730 PF02833 DHHA2 domain THEMA_RS01730 PF07085 DRTGG domain THEMA_RS01735 PF00892 EamA-like transporter family THEMA_RS01740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THEMA_RS01740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain THEMA_RS01750 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain THEMA_RS01750 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THEMA_RS01750 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain THEMA_RS01765 PF00004 ATPase family associated with various cellular activities (AAA) THEMA_RS01765 PF17862 AAA+ lid domain THEMA_RS01765 PF06480 FtsH Extracellular THEMA_RS01765 PF01434 Peptidase family M41 THEMA_RS01770 PF11734 TilS substrate C-terminal domain THEMA_RS01770 PF01171 PP-loop family THEMA_RS01780 PF03807 NADP oxidoreductase coenzyme F420-dependent THEMA_RS01780 PF14748 Pyrroline-5-carboxylate reductase dimerisation THEMA_RS01785 PF00583 Acetyltransferase (GNAT) family THEMA_RS01790 PF00929 Exonuclease THEMA_RS01790 PF02811 PHP domain THEMA_RS01790 PF14579 Helix-hairpin-helix motif THEMA_RS01790 PF07733 Bacterial DNA polymerase III alpha NTPase domain THEMA_RS01790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THEMA_RS01795 PF02075 Crossover junction endodeoxyribonuclease RuvC THEMA_RS01800 PF02547 Queuosine biosynthesis protein THEMA_RS01805 PF00795 Carbon-nitrogen hydrolase THEMA_RS01810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THEMA_RS01815 PF17820 PDZ domain THEMA_RS01815 PF13180 PDZ domain THEMA_RS01820 PF02881 SRP54-type protein, helical bundle domain THEMA_RS01820 PF00448 SRP54-type protein, GTPase domain THEMA_RS01835 PF02082 Transcriptional regulator THEMA_RS01845 PF03749 Sugar fermentation stimulation protein RE domain THEMA_RS01845 PF17746 SfsA N-terminal OB domain THEMA_RS01870 PF01544 CorA-like Mg2+ transporter protein THEMA_RS01885 PF00117 Glutamine amidotransferase class-I THEMA_RS01885 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain THEMA_RS01890 PF02142 MGS-like domain THEMA_RS01890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain THEMA_RS01890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THEMA_RS01895 PF00180 Isocitrate/isopropylmalate dehydrogenase THEMA_RS01900 PF00694 Aconitase C-terminal domain THEMA_RS01905 PF00330 Aconitase family (aconitate hydratase) THEMA_RS01910 PF08502 LeuA allosteric (dimerisation) domain THEMA_RS01910 PF00682 HMGL-like THEMA_RS01915 PF08502 LeuA allosteric (dimerisation) domain THEMA_RS01915 PF00682 HMGL-like THEMA_RS01920 PF00920 Dehydratase family THEMA_RS01925 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain THEMA_RS01925 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain THEMA_RS01930 PF10369 Small subunit of acetolactate synthase THEMA_RS01935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THEMA_RS01935 PF00205 Thiamine pyrophosphate enzyme, central domain THEMA_RS01935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THEMA_RS01940 PF00696 Amino acid kinase family THEMA_RS01940 PF13840 ACT domain THEMA_RS01940 PF01842 ACT domain THEMA_RS01945 PF00291 Pyridoxal-phosphate dependent enzyme THEMA_RS01950 PF00288 GHMP kinases N terminal domain THEMA_RS01955 PF00005 ABC transporter THEMA_RS01965 PF00390 Malic enzyme, N-terminal domain THEMA_RS01965 PF03949 Malic enzyme, NAD binding domain THEMA_RS01970 PF05681 Fumarate hydratase (Fumerase) THEMA_RS01970 PF05683 Fumarase C-terminus THEMA_RS01980 PF00291 Pyridoxal-phosphate dependent enzyme THEMA_RS01985 PF01545 Cation efflux family THEMA_RS01990 PF13514 AAA domain THEMA_RS02005 PF03979 Sigma-70 factor, region 1.1 THEMA_RS02005 PF00140 Sigma-70 factor, region 1.2 THEMA_RS02005 PF04539 Sigma-70 region 3 THEMA_RS02005 PF04545 Sigma-70, region 4 THEMA_RS02005 PF04542 Sigma-70 region 2 THEMA_RS02010 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS02010 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_RS02015 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS02020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_RS02025 PF00005 ABC transporter THEMA_RS02025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS02030 PF00403 Heavy-metal-associated domain THEMA_RS02035 PF02911 Formyl transferase, C-terminal domain THEMA_RS02035 PF00551 Formyl transferase THEMA_RS02040 PF16360 GTP-binding GTPase Middle Region THEMA_RS02040 PF01926 50S ribosome-binding GTPase THEMA_RS02040 PF13167 GTP-binding GTPase N-terminal THEMA_RS02045 PF17209 Hfq protein THEMA_RS02070 PF07724 AAA domain (Cdc48 subfamily) THEMA_RS02070 PF10431 C-terminal, D2-small domain, of ClpB protein THEMA_RS02070 PF00004 ATPase family associated with various cellular activities (AAA) THEMA_RS02075 PF00227 Proteasome subunit THEMA_RS02105 PF04055 Radical SAM superfamily THEMA_RS02105 PF16199 Radical_SAM C-terminal domain THEMA_RS02110 PF03129 Anticodon binding domain THEMA_RS02110 PF04073 Aminoacyl-tRNA editing domain THEMA_RS02110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THEMA_RS02115 PF13335 Magnesium chelatase, subunit ChlI C-terminal THEMA_RS02115 PF01078 Magnesium chelatase, subunit ChlI THEMA_RS02125 PF03167 Uracil DNA glycosylase superfamily THEMA_RS02135 PF16363 GDP-mannose 4,6 dehydratase THEMA_RS02140 PF05496 Holliday junction DNA helicase RuvB P-loop domain THEMA_RS02140 PF12002 MgsA AAA+ ATPase C terminal THEMA_RS02140 PF01661 Macro domain THEMA_RS02140 PF16193 AAA C-terminal domain THEMA_RS02150 PF00118 TCP-1/cpn60 chaperonin family THEMA_RS02155 PF00166 Chaperonin 10 Kd subunit THEMA_RS02160 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS02165 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS02165 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_RS02170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS02170 PF00005 ABC transporter THEMA_RS02175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS02175 PF00005 ABC transporter THEMA_RS02185 PF00005 ABC transporter THEMA_RS02185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS02195 PF00929 Exonuclease THEMA_RS02195 PF02811 PHP domain THEMA_RS02195 PF14579 Helix-hairpin-helix motif THEMA_RS02195 PF07733 Bacterial DNA polymerase III alpha NTPase domain THEMA_RS02195 PF11490 DNA polymerase III polC-type N-terminus II THEMA_RS02195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THEMA_RS02195 PF01336 OB-fold nucleic acid binding domain THEMA_RS02200 PF02562 PhoH-like protein THEMA_RS02200 PF13638 PIN domain THEMA_RS02205 PF04079 Segregation and condensation complex subunit ScpB THEMA_RS02210 PF02616 Segregation and condensation protein ScpA THEMA_RS02215 PF00579 tRNA synthetases class I (W and Y) THEMA_RS02225 PF02146 Sir2 family THEMA_RS02235 PF05175 Methyltransferase small domain THEMA_RS02235 PF17827 PrmC N-terminal domain THEMA_RS02240 PF01883 Iron-sulfur cluster assembly protein THEMA_RS02245 PF01910 Thiamine-binding protein THEMA_RS02250 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS02260 PF00005 ABC transporter THEMA_RS02290 PF00005 ABC transporter THEMA_RS02290 PF17755 UvrA DNA-binding domain THEMA_RS02290 PF17760 UvrA interaction domain THEMA_RS02300 PF00579 tRNA synthetases class I (W and Y) THEMA_RS02300 PF01479 S4 domain THEMA_RS02305 PF00395 S-layer homology domain THEMA_RS02320 PF00857 Isochorismatase family THEMA_RS02330 PF01680 SOR/SNZ family THEMA_RS02335 PF01174 SNO glutamine amidotransferase family THEMA_RS02355 PF00486 Transcriptional regulatory protein, C terminal THEMA_RS02355 PF00072 Response regulator receiver domain THEMA_RS02365 PF01709 Transcriptional regulator THEMA_RS02375 PF01739 CheR methyltransferase, SAM binding domain THEMA_RS02375 PF03705 CheR methyltransferase, all-alpha domain THEMA_RS02380 PF00849 RNA pseudouridylate synthase THEMA_RS02380 PF01479 S4 domain THEMA_RS02385 PF14579 Helix-hairpin-helix motif THEMA_RS02385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THEMA_RS02385 PF07733 Bacterial DNA polymerase III alpha NTPase domain THEMA_RS02390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_RS02395 PF04997 RNA polymerase Rpb1, domain 1 THEMA_RS02395 PF00623 RNA polymerase Rpb1, domain 2 THEMA_RS02395 PF04998 RNA polymerase Rpb1, domain 5 THEMA_RS02395 PF04983 RNA polymerase Rpb1, domain 3 THEMA_RS02395 PF05000 RNA polymerase Rpb1, domain 4 THEMA_RS02400 PF10385 RNA polymerase beta subunit external 1 domain THEMA_RS02400 PF00562 RNA polymerase Rpb2, domain 6 THEMA_RS02400 PF04560 RNA polymerase Rpb2, domain 7 THEMA_RS02400 PF04563 RNA polymerase beta subunit THEMA_RS02400 PF04565 RNA polymerase Rpb2, domain 3 THEMA_RS02405 PF16320 Ribosomal protein L7/L12 dimerisation domain THEMA_RS02405 PF00542 Ribosomal protein L7/L12 C-terminal domain THEMA_RS02410 PF00466 Ribosomal protein L10 THEMA_RS02415 PF00687 Ribosomal protein L1p/L10e family THEMA_RS02420 PF03946 Ribosomal protein L11, N-terminal domain THEMA_RS02420 PF00298 Ribosomal protein L11, RNA binding domain THEMA_RS02425 PF18298 NusG additional domain THEMA_RS02425 PF02357 Transcription termination factor nusG THEMA_RS02425 PF00467 KOW motif THEMA_RS02430 PF00584 SecE/Sec61-gamma subunits of protein translocation complex THEMA_RS02440 PF00471 Ribosomal protein L33 THEMA_RS02465 PF02511 Thymidylate synthase complementing protein THEMA_RS02470 PF01103 Surface antigen THEMA_RS02470 PF07244 Surface antigen variable number repeat THEMA_RS02475 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain THEMA_RS02475 PF02222 ATP-grasp domain THEMA_RS02480 PF00731 AIR carboxylase THEMA_RS02485 PF01926 50S ribosome-binding GTPase THEMA_RS02485 PF12631 MnmE helical domain THEMA_RS02485 PF10396 GTP-binding protein TrmE N-terminus THEMA_RS02490 PF00206 Lyase THEMA_RS02490 PF10415 Fumarase C C-terminus THEMA_RS02495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THEMA_RS02495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THEMA_RS02515 PF07729 FCD domain THEMA_RS02515 PF00392 Bacterial regulatory proteins, gntR family THEMA_RS02520 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain THEMA_RS02520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase THEMA_RS02525 PF00295 Glycosyl hydrolases family 28 THEMA_RS02530 PF08240 Alcohol dehydrogenase GroES-like domain THEMA_RS02530 PF00107 Zinc-binding dehydrogenase THEMA_RS02540 PF11975 Family 4 glycosyl hydrolase C-terminal domain THEMA_RS02540 PF02056 Family 4 glycosyl hydrolase THEMA_RS02545 PF00544 Pectate lyase THEMA_RS02555 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS02560 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS02565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_RS02570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family THEMA_RS02595 PF00465 Iron-containing alcohol dehydrogenase THEMA_RS02605 PF17912 MalK OB fold domain THEMA_RS02605 PF00005 ABC transporter THEMA_RS02605 PF03459 TOBE domain THEMA_RS02610 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS02615 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS02625 PF03239 Iron permease FTR1 family THEMA_RS02630 PF01261 Xylose isomerase-like TIM barrel THEMA_RS02640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain THEMA_RS02640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THEMA_RS02645 PF02633 Creatinine amidohydrolase THEMA_RS02650 PF08240 Alcohol dehydrogenase GroES-like domain THEMA_RS02650 PF00107 Zinc-binding dehydrogenase THEMA_RS02655 PF00480 ROK family THEMA_RS02655 PF01047 MarR family THEMA_RS02665 PF04225 Opacity-associated protein A LysM-like domain THEMA_RS02665 PF01551 Peptidase family M23 THEMA_RS02670 PF00072 Response regulator receiver domain THEMA_RS02670 PF01339 CheB methylesterase THEMA_RS02685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THEMA_RS02695 PF00543 Nitrogen regulatory protein P-II THEMA_RS02700 PF00909 Ammonium Transporter Family THEMA_RS02705 PF00265 Thymidine kinase THEMA_RS02710 PF00512 His Kinase A (phospho-acceptor) domain THEMA_RS02710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_RS02710 PF00672 HAMP domain THEMA_RS02715 PF00072 Response regulator receiver domain THEMA_RS02715 PF00486 Transcriptional regulatory protein, C terminal THEMA_RS02725 PF00310 Glutamine amidotransferases class-II THEMA_RS02730 PF01645 Conserved region in glutamate synthase THEMA_RS02730 PF13187 4Fe-4S dicluster domain THEMA_RS02735 PF13247 4Fe-4S dicluster domain THEMA_RS02735 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THEMA_RS02735 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_RS02755 PF00534 Glycosyl transferases group 1 THEMA_RS02760 PF00005 ABC transporter THEMA_RS02775 PF00881 Nitroreductase family THEMA_RS02780 PF03477 ATP cone domain THEMA_RS02780 PF13597 Anaerobic ribonucleoside-triphosphate reductase THEMA_RS02790 PF00881 Nitroreductase family THEMA_RS02795 PF00730 HhH-GPD superfamily base excision DNA repair protein THEMA_RS02795 PF14815 NUDIX domain THEMA_RS02795 PF00633 Helix-hairpin-helix motif THEMA_RS02800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THEMA_RS02800 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_RS02810 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_RS02810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THEMA_RS02815 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus THEMA_RS02815 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus THEMA_RS02820 PF01925 Sulfite exporter TauE/SafE THEMA_RS02825 PF06130 Phosphate propanoyltransferase THEMA_RS02830 PF00011 Hsp20/alpha crystallin family THEMA_RS02835 PF00012 Hsp70 protein THEMA_RS02840 PF00873 AcrB/AcrD/AcrF family THEMA_RS02845 PF02863 Arginine repressor, C-terminal domain THEMA_RS02845 PF01316 Arginine repressor, DNA binding domain THEMA_RS02850 PF06745 KaiC THEMA_RS02870 PF00730 HhH-GPD superfamily base excision DNA repair protein THEMA_RS02870 PF10576 Iron-sulfur binding domain of endonuclease III THEMA_RS02870 PF00633 Helix-hairpin-helix motif THEMA_RS02875 PF02127 Aminopeptidase I zinc metalloprotease (M18) THEMA_RS02880 PF00128 Alpha amylase, catalytic domain THEMA_RS02880 PF09178 Domain of unknown function (DUF1945) THEMA_RS02885 PF05670 NFACT protein RNA binding domain THEMA_RS02890 PF01261 Xylose isomerase-like TIM barrel THEMA_RS02900 PF03819 MazG nucleotide pyrophosphohydrolase domain THEMA_RS02910 PF00781 Diacylglycerol kinase catalytic domain THEMA_RS02920 PF00291 Pyridoxal-phosphate dependent enzyme THEMA_RS02920 PF13291 ACT domain THEMA_RS02935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THEMA_RS02940 PF00005 ABC transporter THEMA_RS02945 PF00005 ABC transporter THEMA_RS02945 PF12704 MacB-like periplasmic core domain THEMA_RS02945 PF02687 FtsX-like permease family THEMA_RS02955 PF01220 Dehydroquinase class II THEMA_RS02960 PF01761 3-dehydroquinate synthase THEMA_RS02960 PF01202 Shikimate kinase THEMA_RS02965 PF01264 Chorismate synthase THEMA_RS02970 PF08501 Shikimate dehydrogenase substrate binding domain THEMA_RS02970 PF01488 Shikimate / quinate 5-dehydrogenase THEMA_RS02975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THEMA_RS02985 PF00793 DAHP synthetase I family THEMA_RS02985 PF18152 DAHP synthase ferredoxin-like domain THEMA_RS03015 PF08497 Radical SAM N-terminal THEMA_RS03015 PF04055 Radical SAM superfamily THEMA_RS03020 PF12146 Serine aminopeptidase, S33 THEMA_RS03020 PF13026 Protein of unknown function (DUF3887) THEMA_RS03030 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B THEMA_RS03035 PF01180 Dihydroorotate dehydrogenase THEMA_RS03040 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family THEMA_RS03045 PF00156 Phosphoribosyl transferase domain THEMA_RS03050 PF07969 Amidohydrolase family THEMA_RS03060 PF01555 DNA methylase THEMA_RS03070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THEMA_RS03070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THEMA_RS03075 PF01380 SIS domain THEMA_RS03075 PF01418 Helix-turn-helix domain, rpiR family THEMA_RS03085 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component THEMA_RS03095 PF03480 Bacterial extracellular solute-binding protein, family 7 THEMA_RS03115 PF01209 ubiE/COQ5 methyltransferase family THEMA_RS03120 PF00403 Heavy-metal-associated domain THEMA_RS03140 PF00248 Aldo/keto reductase family THEMA_RS03145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain THEMA_RS03145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THEMA_RS03155 PF08533 Beta-galactosidase C-terminal domain THEMA_RS03155 PF02449 Beta-galactosidase THEMA_RS03155 PF08532 Beta-galactosidase trimerisation domain THEMA_RS03160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_RS03165 PF13802 Galactose mutarotase-like THEMA_RS03165 PF01055 Glycosyl hydrolases family 31 THEMA_RS03180 PF03442 Carbohydrate binding domain X2 THEMA_RS03180 PF00942 Cellulose binding domain THEMA_RS03185 PF00005 ABC transporter THEMA_RS03185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS03190 PF00005 ABC transporter THEMA_RS03190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS03195 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS03195 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_RS03200 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS03210 PF00356 Bacterial regulatory proteins, lacI family THEMA_RS03215 PF08240 Alcohol dehydrogenase GroES-like domain THEMA_RS03215 PF16912 Glucose dehydrogenase C-terminus THEMA_RS03225 PF00294 pfkB family carbohydrate kinase THEMA_RS03230 PF00923 Transaldolase/Fructose-6-phosphate aldolase THEMA_RS03235 PF01472 PUA domain THEMA_RS03235 PF00696 Amino acid kinase family THEMA_RS03240 PF00171 Aldehyde dehydrogenase family THEMA_RS03245 PF00694 Aconitase C-terminal domain THEMA_RS03250 PF00330 Aconitase family (aconitate hydratase) THEMA_RS03255 PF00285 Citrate synthase, C-terminal domain THEMA_RS03260 PF00365 Phosphofructokinase THEMA_RS03265 PF00664 ABC transporter transmembrane region THEMA_RS03265 PF00005 ABC transporter THEMA_RS03270 PF00005 ABC transporter THEMA_RS03270 PF00664 ABC transporter transmembrane region THEMA_RS03280 PF13685 Iron-containing alcohol dehydrogenase THEMA_RS03285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THEMA_RS03285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THEMA_RS03290 PF00596 Class II Aldolase and Adducin N-terminal domain THEMA_RS03295 PF01263 Aldose 1-epimerase THEMA_RS03300 PF06964 Alpha-L-arabinofuranosidase C-terminal domain THEMA_RS03310 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS03315 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS03325 PF02610 L-arabinose isomerase THEMA_RS03325 PF11762 L-arabinose isomerase C-terminal domain THEMA_RS03330 PF00392 Bacterial regulatory proteins, gntR family THEMA_RS03335 PF00871 Acetokinase family THEMA_RS03340 PF01116 Fructose-bisphosphate aldolase class-II THEMA_RS03345 PF02896 PEP-utilising enzyme, TIM barrel domain THEMA_RS03345 PF00391 PEP-utilising enzyme, mobile domain THEMA_RS03345 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain THEMA_RS03355 PF02219 Methylenetetrahydrofolate reductase THEMA_RS03355 PF02574 Homocysteine S-methyltransferase THEMA_RS03365 PF02310 B12 binding domain THEMA_RS03365 PF02607 B12 binding domain THEMA_RS03365 PF02965 Vitamin B12 dependent methionine synthase, activation domain THEMA_RS03365 PF00809 Pterin binding enzyme THEMA_RS03365 PF02574 Homocysteine S-methyltransferase THEMA_RS03370 PF10396 GTP-binding protein TrmE N-terminus THEMA_RS03370 PF01926 50S ribosome-binding GTPase THEMA_RS03370 PF12631 MnmE helical domain THEMA_RS03375 PF00216 Bacterial DNA-binding protein THEMA_RS03380 PF01541 GIY-YIG catalytic domain THEMA_RS03380 PF08459 UvrC Helix-hairpin-helix N-terminal THEMA_RS03380 PF02151 UvrB/uvrC motif THEMA_RS03385 PF01479 S4 domain THEMA_RS03385 PF00849 RNA pseudouridylate synthase THEMA_RS03390 PF13932 GidA associated domain THEMA_RS03390 PF01134 Glucose inhibited division protein A THEMA_RS03395 PF02768 DNA polymerase III beta subunit, C-terminal domain THEMA_RS03395 PF02767 DNA polymerase III beta subunit, central domain THEMA_RS03395 PF00712 DNA polymerase III beta subunit, N-terminal domain THEMA_RS03400 PF01384 Phosphate transporter family THEMA_RS03410 PF07478 D-ala D-ala ligase C-terminus THEMA_RS03410 PF01820 D-ala D-ala ligase N-terminus THEMA_RS03415 PF01131 DNA topoisomerase THEMA_RS03415 PF01751 Toprim domain THEMA_RS03420 PF01336 OB-fold nucleic acid binding domain THEMA_RS03420 PF01966 HD domain THEMA_RS03430 PF00830 Ribosomal L28 family THEMA_RS03435 PF01668 SmpB protein THEMA_RS03440 PF02021 Uncharacterised protein family UPF0102 THEMA_RS03445 PF02686 Glu-tRNAGln amidotransferase C subunit THEMA_RS03450 PF02599 Global regulator protein family THEMA_RS03455 PF18255 DNA processing protein A sterile alpha motif domain THEMA_RS03455 PF02481 DNA recombination-mediator protein A THEMA_RS03460 PF04060 Putative Fe-S cluster THEMA_RS03460 PF13187 4Fe-4S dicluster domain THEMA_RS03465 PF02508 Rnf-Nqr subunit, membrane protein THEMA_RS03470 PF02508 Rnf-Nqr subunit, membrane protein THEMA_RS03480 PF03116 NQR2, RnfD, RnfE family THEMA_RS03485 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THEMA_RS03485 PF13237 4Fe-4S dicluster domain THEMA_RS03485 PF13375 RnfC Barrel sandwich hybrid domain THEMA_RS03485 PF10531 SLBB domain THEMA_RS03490 PF04055 Radical SAM superfamily THEMA_RS03490 PF06968 Biotin and Thiamin Synthesis associated domain THEMA_RS03505 PF00132 Bacterial transferase hexapeptide (six repeats) THEMA_RS03505 PF00483 Nucleotidyl transferase THEMA_RS03510 PF00483 Nucleotidyl transferase THEMA_RS03510 PF00132 Bacterial transferase hexapeptide (six repeats) THEMA_RS03520 PF02875 Mur ligase family, glutamate ligase domain THEMA_RS03520 PF01225 Mur ligase family, catalytic domain THEMA_RS03520 PF08245 Mur ligase middle domain THEMA_RS03525 PF01225 Mur ligase family, catalytic domain THEMA_RS03525 PF02875 Mur ligase family, glutamate ligase domain THEMA_RS03525 PF08245 Mur ligase middle domain THEMA_RS03530 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 THEMA_RS03530 PF00953 Glycosyl transferase family 4 THEMA_RS03535 PF08245 Mur ligase middle domain THEMA_RS03540 PF01098 Cell cycle protein THEMA_RS03545 PF04101 Glycosyltransferase family 28 C-terminal domain THEMA_RS03545 PF03033 Glycosyltransferase family 28 N-terminal domain THEMA_RS03550 PF02875 Mur ligase family, glutamate ligase domain THEMA_RS03550 PF01225 Mur ligase family, catalytic domain THEMA_RS03550 PF08245 Mur ligase middle domain THEMA_RS03565 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THEMA_RS03565 PF00037 4Fe-4S binding domain THEMA_RS03565 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THEMA_RS03580 PF00291 Pyridoxal-phosphate dependent enzyme THEMA_RS03585 PF02237 Biotin protein ligase C terminal domain THEMA_RS03585 PF08279 HTH domain THEMA_RS03585 PF03099 Biotin/lipoate A/B protein ligase family THEMA_RS03595 PF00005 ABC transporter THEMA_RS03600 PF01514 Secretory protein of YscJ/FliF family THEMA_RS03600 PF08345 Flagellar M-ring protein C-terminal THEMA_RS03605 PF01706 FliG C-terminal domain THEMA_RS03605 PF14842 FliG N-terminal domain THEMA_RS03605 PF14841 FliG middle domain THEMA_RS03610 PF02108 Flagellar assembly protein FliH THEMA_RS03615 PF02874 ATP synthase alpha/beta family, beta-barrel domain THEMA_RS03615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THEMA_RS03615 PF18269 T3SS EscN ATPase C-terminal domain THEMA_RS03620 PF05746 DALR anticodon binding domain THEMA_RS03620 PF02092 Glycyl-tRNA synthetase beta subunit THEMA_RS03625 PF02091 Glycyl-tRNA synthetase alpha subunit THEMA_RS03630 PF01042 Endoribonuclease L-PSP THEMA_RS03635 PF02347 Glycine cleavage system P-protein THEMA_RS03640 PF02347 Glycine cleavage system P-protein THEMA_RS03645 PF01597 Glycine cleavage H-protein THEMA_RS03650 PF01571 Aminomethyltransferase folate-binding domain THEMA_RS03650 PF08669 Glycine cleavage T-protein C-terminal barrel domain THEMA_RS03660 PF00365 Phosphofructokinase THEMA_RS03665 PF02887 Pyruvate kinase, alpha/beta domain THEMA_RS03665 PF00224 Pyruvate kinase, barrel domain THEMA_RS03680 PF17191 RecG wedge domain THEMA_RS03680 PF00270 DEAD/DEAH box helicase THEMA_RS03680 PF00271 Helicase conserved C-terminal domain THEMA_RS03685 PF00005 ABC transporter THEMA_RS03700 PF00037 4Fe-4S binding domain THEMA_RS03700 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THEMA_RS03700 PF02256 Iron hydrogenase small subunit THEMA_RS03700 PF02906 Iron only hydrogenase large subunit, C-terminal domain THEMA_RS03705 PF00633 Helix-hairpin-helix motif THEMA_RS03705 PF10635 DisA bacterial checkpoint controller linker region THEMA_RS03705 PF02457 DisA bacterial checkpoint controller nucleotide-binding THEMA_RS03710 PF18073 Rubredoxin metal binding domain THEMA_RS03715 PF07724 AAA domain (Cdc48 subfamily) THEMA_RS03715 PF02861 Clp amino terminal domain, pathogenicity island component THEMA_RS03715 PF00004 ATPase family associated with various cellular activities (AAA) THEMA_RS03715 PF10431 C-terminal, D2-small domain, of ClpB protein THEMA_RS03715 PF17871 AAA lid domain THEMA_RS03720 PF01171 PP-loop family THEMA_RS03740 PF00005 ABC transporter THEMA_RS03745 PF03649 Uncharacterised protein family (UPF0014) THEMA_RS03770 PF04232 Stage V sporulation protein S (SpoVS) THEMA_RS03775 PF00005 ABC transporter THEMA_RS03780 PF01032 FecCD transport family THEMA_RS03790 PF01980 tRNA-methyltransferase O THEMA_RS03800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_RS03800 PF00512 His Kinase A (phospho-acceptor) domain THEMA_RS03800 PF09308 LuxQ, periplasmic THEMA_RS03800 PF00072 Response regulator receiver domain THEMA_RS03805 PF01966 HD domain THEMA_RS03805 PF00072 Response regulator receiver domain THEMA_RS03815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THEMA_RS03815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THEMA_RS03815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THEMA_RS03815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THEMA_RS03820 PF02540 NAD synthase THEMA_RS03820 PF00795 Carbon-nitrogen hydrolase THEMA_RS03825 PF01938 TRAM domain THEMA_RS03825 PF04055 Radical SAM superfamily THEMA_RS03825 PF00919 Uncharacterized protein family UPF0004 THEMA_RS03870 PF04851 Type III restriction enzyme, res subunit THEMA_RS03870 PF18319 PriA DNA helicase Cys-rich region (CRR) domain THEMA_RS03870 PF18074 Primosomal protein N C-terminal domain THEMA_RS03870 PF17764 3′ DNA-binding domain (3′BD) THEMA_RS03875 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) THEMA_RS03875 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 THEMA_RS03885 PF00550 Phosphopantetheine attachment site THEMA_RS03890 PF03030 Inorganic H+ pyrophosphatase THEMA_RS03895 PF17915 Reverse gyrase zinc finger THEMA_RS03895 PF01131 DNA topoisomerase THEMA_RS03895 PF00270 DEAD/DEAH box helicase THEMA_RS03895 PF01751 Toprim domain THEMA_RS03900 PF05221 S-adenosyl-L-homocysteine hydrolase THEMA_RS03900 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain THEMA_RS03915 PF06971 Putative DNA-binding protein N-terminus THEMA_RS03915 PF02629 CoA binding domain THEMA_RS03920 PF08264 Anticodon-binding domain of tRNA THEMA_RS03920 PF09334 tRNA synthetases class I (M) THEMA_RS03920 PF00133 tRNA synthetases class I (I, L, M and V) THEMA_RS03920 PF13603 Leucyl-tRNA synthetase, Domain 2 THEMA_RS03925 PF01676 Metalloenzyme superfamily THEMA_RS03930 PF08245 Mur ligase middle domain THEMA_RS03930 PF02875 Mur ligase family, glutamate ligase domain THEMA_RS03935 PF01330 RuvA N terminal domain THEMA_RS03935 PF07499 RuvA, C-terminal domain THEMA_RS03955 PF00348 Polyprenyl synthetase THEMA_RS03965 PF01725 Ham1 family THEMA_RS03970 PF01790 Prolipoprotein diacylglyceryl transferase THEMA_RS03985 PF00245 Alkaline phosphatase THEMA_RS03990 PF00800 Prephenate dehydratase THEMA_RS03990 PF01842 ACT domain THEMA_RS03990 PF01817 Chorismate mutase type II THEMA_RS04010 PF01783 Ribosomal L32p protein family THEMA_RS04015 PF02504 Fatty acid synthesis protein THEMA_RS04020 PF01380 SIS domain THEMA_RS04030 PF10431 C-terminal, D2-small domain, of ClpB protein THEMA_RS04030 PF06689 ClpX C4-type zinc finger THEMA_RS04030 PF07724 AAA domain (Cdc48 subfamily) THEMA_RS04035 PF00814 Glycoprotease family THEMA_RS04050 PF00990 Diguanylate cyclase, GGDEF domain THEMA_RS04050 PF00072 Response regulator receiver domain THEMA_RS04055 PF04715 Anthranilate synthase component I, N terminal region THEMA_RS04055 PF00425 chorismate binding enzyme THEMA_RS04060 PF00591 Glycosyl transferase family, a/b domain THEMA_RS04060 PF00117 Glutamine amidotransferase class-I THEMA_RS04060 PF02885 Glycosyl transferase family, helical bundle domain THEMA_RS04065 PF00218 Indole-3-glycerol phosphate synthase THEMA_RS04070 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase THEMA_RS04075 PF00291 Pyridoxal-phosphate dependent enzyme THEMA_RS04080 PF00290 Tryptophan synthase alpha chain THEMA_RS04085 PF04055 Radical SAM superfamily THEMA_RS04095 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_RS04100 PF00857 Isochorismatase family THEMA_RS04105 PF00669 Bacterial flagellin N-terminal helical region THEMA_RS04105 PF00700 Bacterial flagellin C-terminal helical region THEMA_RS04110 PF07690 Major Facilitator Superfamily THEMA_RS04120 PF02436 Conserved carboxylase domain THEMA_RS04120 PF00364 Biotin-requiring enzyme THEMA_RS04120 PF00682 HMGL-like THEMA_RS04130 PF00486 Transcriptional regulatory protein, C terminal THEMA_RS04130 PF00072 Response regulator receiver domain THEMA_RS04135 PF00950 ABC 3 transport family THEMA_RS04140 PF00005 ABC transporter THEMA_RS04145 PF01297 Zinc-uptake complex component A periplasmic THEMA_RS04160 PF00881 Nitroreductase family THEMA_RS04170 PF00317 Ribonucleotide reductase, all-alpha domain THEMA_RS04170 PF02867 Ribonucleotide reductase, barrel domain THEMA_RS04170 PF03477 ATP cone domain THEMA_RS04180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THEMA_RS04180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THEMA_RS04185 PF00005 ABC transporter THEMA_RS04195 PF01522 Polysaccharide deacetylase THEMA_RS04200 PF02653 Branched-chain amino acid transport system / permease component THEMA_RS04205 PF00465 Iron-containing alcohol dehydrogenase THEMA_RS04210 PF00480 ROK family THEMA_RS04210 PF01325 Iron dependent repressor, N-terminal DNA binding domain THEMA_RS04220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THEMA_RS04260 PF00533 BRCA1 C Terminus (BRCT) domain THEMA_RS04260 PF12826 Helix-hairpin-helix motif THEMA_RS04260 PF01653 NAD-dependent DNA ligase adenylation domain THEMA_RS04260 PF03120 NAD-dependent DNA ligase OB-fold domain THEMA_RS04260 PF03119 NAD-dependent DNA ligase C4 zinc finger domain THEMA_RS04270 PF01018 GTP1/OBG THEMA_RS04270 PF01926 50S ribosome-binding GTPase THEMA_RS04270 PF09269 Domain of unknown function (DUF1967) THEMA_RS04275 PF01467 Cytidylyltransferase-like THEMA_RS04280 PF01207 Dihydrouridine synthase (Dus) THEMA_RS04285 PF02915 Rubrerythrin THEMA_RS04290 PF00482 Type II secretion system (T2SS), protein F THEMA_RS04320 PF11741 AMIN domain THEMA_RS04320 PF00263 Bacterial type II and III secretion system protein THEMA_RS04320 PF07660 Secretin and TonB N terminus short domain THEMA_RS04320 PF03958 Bacterial type II/III secretion system short domain THEMA_RS04325 PF01875 Memo-like protein THEMA_RS04330 PF03023 Lipid II flippase MurJ THEMA_RS04345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEMA_RS04345 PF07196 Flagellin hook IN motif THEMA_RS04350 PF00669 Bacterial flagellin N-terminal helical region THEMA_RS04355 PF02623 FliW protein THEMA_RS04360 PF01497 Periplasmic binding protein THEMA_RS04365 PF01032 FecCD transport family THEMA_RS04370 PF00005 ABC transporter THEMA_RS04375 PF05448 Acetyl xylan esterase (AXE1) THEMA_RS04380 PF14310 Fibronectin type III-like domain THEMA_RS04380 PF00933 Glycosyl hydrolase family 3 N terminal domain THEMA_RS04380 PF01915 Glycosyl hydrolase family 3 C-terminal domain THEMA_RS04385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS04385 PF00005 ABC transporter THEMA_RS04390 PF00005 ABC transporter THEMA_RS04390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS04395 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_RS04395 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS04400 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS04405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_RS04410 PF00331 Glycosyl hydrolase family 10 THEMA_RS04415 PF03786 D-mannonate dehydratase (UxuA) THEMA_RS04420 PF01232 Mannitol dehydrogenase Rossmann domain THEMA_RS04420 PF08125 Mannitol dehydrogenase C-terminal domain THEMA_RS04430 PF01081 KDPG and KHG aldolase THEMA_RS04435 PF01614 Bacterial transcriptional regulator THEMA_RS04435 PF09339 IclR helix-turn-helix domain THEMA_RS04440 PF02614 Glucuronate isomerase THEMA_RS04455 PF00331 Glycosyl hydrolase family 10 THEMA_RS04455 PF06452 Carbohydrate family 9 binding domain-like THEMA_RS04455 PF02018 Carbohydrate binding domain THEMA_RS04460 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS04465 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_RS04465 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS04470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS04470 PF00005 ABC transporter THEMA_RS04475 PF00005 ABC transporter THEMA_RS04475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS04480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_RS04485 PF07488 Glycosyl hydrolase family 67 middle domain THEMA_RS04485 PF03648 Glycosyl hydrolase family 67 N-terminus THEMA_RS04485 PF07477 Glycosyl hydrolase family 67 C-terminus THEMA_RS04505 PF02421 Ferrous iron transport protein B THEMA_RS04505 PF07664 Ferrous iron transport protein B C terminus THEMA_RS04505 PF04023 FeoA domain THEMA_RS04505 PF17910 FeoB cytosolic helical domain THEMA_RS04505 PF07670 Nucleoside recognition THEMA_RS04515 PF04015 Domain of unknown function (DUF362) THEMA_RS04525 PF07282 Putative transposase DNA-binding domain THEMA_RS04525 PF01385 Probable transposase THEMA_RS04525 PF12323 Helix-turn-helix domain THEMA_RS04545 PF00005 ABC transporter THEMA_RS04545 PF00664 ABC transporter transmembrane region THEMA_RS04550 PF00557 Metallopeptidase family M24 THEMA_RS04550 PF01321 Creatinase/Prolidase N-terminal domain THEMA_RS04555 PF02152 Dihydroneopterin aldolase THEMA_RS04555 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) THEMA_RS04560 PF00809 Pterin binding enzyme THEMA_RS04565 PF02649 Type I GTP cyclohydrolase folE2 THEMA_RS04570 PF01242 6-pyruvoyl tetrahydropterin synthase THEMA_RS04575 PF01966 HD domain THEMA_RS04580 PF03266 NTPase THEMA_RS04600 PF00480 ROK family THEMA_RS04605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_RS04610 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS04620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS04620 PF00005 ABC transporter THEMA_RS04625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS04625 PF00005 ABC transporter THEMA_RS04635 PF00933 Glycosyl hydrolase family 3 N terminal domain THEMA_RS04635 PF14310 Fibronectin type III-like domain THEMA_RS04635 PF01915 Glycosyl hydrolase family 3 C-terminal domain THEMA_RS04640 PF00722 Glycosyl hydrolases family 16 THEMA_RS04645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_RS04650 PF08676 MutL C terminal dimerisation domain THEMA_RS04650 PF01119 DNA mismatch repair protein, C-terminal domain THEMA_RS04655 PF02641 Uncharacterized ACR, COG1993 THEMA_RS04660 PF02537 CrcB-like protein, Camphor Resistance (CrcB) THEMA_RS04670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THEMA_RS04675 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II THEMA_RS04675 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg THEMA_RS04685 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase THEMA_RS04690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_RS04710 PF00037 4Fe-4S binding domain THEMA_RS04710 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THEMA_RS04710 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THEMA_RS04720 PF04199 Putative cyclase THEMA_RS04730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain THEMA_RS04730 PF13378 Enolase C-terminal domain-like THEMA_RS04740 PF00149 Calcineurin-like phosphoesterase THEMA_RS04740 PF02872 5'-nucleotidase, C-terminal domain THEMA_RS04750 PF12850 Calcineurin-like phosphoesterase superfamily domain THEMA_RS04755 PF00749 tRNA synthetases class I (E and Q), catalytic domain THEMA_RS04760 PF00313 'Cold-shock' DNA-binding domain THEMA_RS04765 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THEMA_RS04765 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THEMA_RS04770 PF01894 Uncharacterised protein family UPF0047 THEMA_RS04780 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THEMA_RS04785 PF13654 AAA domain THEMA_RS04785 PF05362 Lon protease (S16) C-terminal proteolytic domain THEMA_RS04790 PF02361 Cobalt transport protein THEMA_RS04795 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain THEMA_RS04795 PF00056 lactate/malate dehydrogenase, NAD binding domain THEMA_RS04805 PF04493 Endonuclease V THEMA_RS04820 PF04055 Radical SAM superfamily THEMA_RS04820 PF18693 TRAM domain THEMA_RS04820 PF00919 Uncharacterized protein family UPF0004 THEMA_RS04825 PF01066 CDP-alcohol phosphatidyltransferase THEMA_RS04835 PF00154 recA bacterial DNA recombination protein THEMA_RS04840 PF02631 RecX family THEMA_RS04845 PF00013 KH domain THEMA_RS04845 PF01966 HD domain THEMA_RS04845 PF12072 Domain of unknown function (DUF3552) THEMA_RS04850 PF00356 Bacterial regulatory proteins, lacI family THEMA_RS04860 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS04865 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS04890 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain THEMA_RS04890 PF06165 Glycosyltransferase family 36 THEMA_RS04895 PF00232 Glycosyl hydrolase family 1 THEMA_RS04900 PF01547 Bacterial extracellular solute-binding protein THEMA_RS04905 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS04910 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS04915 PF13407 Periplasmic binding protein domain THEMA_RS04920 PF02653 Branched-chain amino acid transport system / permease component THEMA_RS04925 PF00005 ABC transporter THEMA_RS04930 PF00480 ROK family THEMA_RS04930 PF01325 Iron dependent repressor, N-terminal DNA binding domain THEMA_RS04940 PF00128 Alpha amylase, catalytic domain THEMA_RS04940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THEMA_RS04940 PF03714 Bacterial pullanase-associated domain THEMA_RS04965 PF00128 Alpha amylase, catalytic domain THEMA_RS04970 PF01547 Bacterial extracellular solute-binding protein THEMA_RS04975 PF14785 Maltose transport system permease protein MalF P2 domain THEMA_RS04975 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS04980 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS04985 PF00128 Alpha amylase, catalytic domain THEMA_RS04990 PF02056 Family 4 glycosyl hydrolase THEMA_RS04990 PF11975 Family 4 glycosyl hydrolase C-terminal domain THEMA_RS04995 PF00672 HAMP domain THEMA_RS04995 PF02743 Cache domain THEMA_RS04995 PF00211 Adenylate and Guanylate cyclase catalytic domain THEMA_RS05010 PF00990 Diguanylate cyclase, GGDEF domain THEMA_RS05010 PF08448 PAS fold THEMA_RS05015 PF01872 RibD C-terminal domain THEMA_RS05015 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THEMA_RS05020 PF00677 Lumazine binding domain THEMA_RS05025 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase THEMA_RS05025 PF00925 GTP cyclohydrolase II THEMA_RS05030 PF00885 6,7-dimethyl-8-ribityllumazine synthase THEMA_RS05040 PF01145 SPFH domain / Band 7 family THEMA_RS05045 PF12221 Bacterial membrane protein N terminal THEMA_RS05045 PF01145 SPFH domain / Band 7 family THEMA_RS05055 PF02568 Thiamine biosynthesis protein (ThiI) THEMA_RS05055 PF00958 GMP synthase C terminal domain THEMA_RS05055 PF00117 Glutamine amidotransferase class-I THEMA_RS05065 PF02417 Chromate transporter THEMA_RS05070 PF10458 Valyl tRNA synthetase tRNA binding arm THEMA_RS05070 PF08264 Anticodon-binding domain of tRNA THEMA_RS05070 PF00133 tRNA synthetases class I (I, L, M and V) THEMA_RS05095 PF18211 Csm1 subunit domain B THEMA_RS05105 PF03787 RAMP superfamily THEMA_RS05115 PF03787 RAMP superfamily THEMA_RS05135 PF00226 DnaJ domain THEMA_RS05135 PF01556 DnaJ C terminal domain THEMA_RS05135 PF00684 DnaJ central domain THEMA_RS05155 PF18395 Cas3 C-terminal domain THEMA_RS05155 PF00270 DEAD/DEAH box helicase THEMA_RS05155 PF18019 HD domain THEMA_RS05165 PF01867 CRISPR associated protein Cas1 THEMA_RS05170 PF09827 CRISPR associated protein Cas2 THEMA_RS05195 PF09701 CRISPR-associated protein (Cas_Cmr5) THEMA_RS05215 PF03707 Bacterial signalling protein N terminal repeat THEMA_RS05215 PF00563 EAL domain THEMA_RS05215 PF00990 Diguanylate cyclase, GGDEF domain THEMA_RS05235 PF00202 Aminotransferase class-III THEMA_RS05240 PF00696 Amino acid kinase family THEMA_RS05245 PF01960 ArgJ family THEMA_RS05250 PF01118 Semialdehyde dehydrogenase, NAD binding domain THEMA_RS05250 PF02774 Semialdehyde dehydrogenase, dimerisation domain THEMA_RS05255 PF00206 Lyase THEMA_RS05260 PF00764 Arginosuccinate synthase THEMA_RS05270 PF17384 RimP C-terminal SH3 domain THEMA_RS05270 PF02576 RimP N-terminal domain THEMA_RS05275 PF00575 S1 RNA binding domain THEMA_RS05275 PF13184 NusA-like KH domain THEMA_RS05275 PF08529 NusA N-terminal domain THEMA_RS05280 PF01475 Ferric uptake regulator family THEMA_RS05290 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase THEMA_RS05290 PF01676 Metalloenzyme superfamily THEMA_RS05300 PF02734 DAK2 domain THEMA_RS05300 PF13684 Dihydroxyacetone kinase family THEMA_RS05310 PF02780 Transketolase, C-terminal domain THEMA_RS05310 PF02779 Transketolase, pyrimidine binding domain THEMA_RS05310 PF13292 1-deoxy-D-xylulose-5-phosphate synthase THEMA_RS05315 PF02609 Exonuclease VII small subunit THEMA_RS05320 PF13742 OB-fold nucleic acid binding domain THEMA_RS05320 PF02601 Exonuclease VII, large subunit THEMA_RS05325 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THEMA_RS05325 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain THEMA_RS05330 PF01268 Formate--tetrahydrofolate ligase THEMA_RS05335 PF01029 NusB family THEMA_RS05345 PF09285 Elongation factor P, C-terminal THEMA_RS05345 PF08207 Elongation factor P (EF-P) KOW-like domain THEMA_RS05345 PF01132 Elongation factor P (EF-P) OB domain THEMA_RS05350 PF13292 1-deoxy-D-xylulose-5-phosphate synthase THEMA_RS05350 PF02780 Transketolase, C-terminal domain THEMA_RS05350 PF02779 Transketolase, pyrimidine binding domain THEMA_RS05355 PF04851 Type III restriction enzyme, res subunit THEMA_RS05355 PF02151 UvrB/uvrC motif THEMA_RS05355 PF12344 Ultra-violet resistance protein B THEMA_RS05355 PF00271 Helicase conserved C-terminal domain THEMA_RS05355 PF17757 UvrB interaction domain THEMA_RS05390 PF00871 Acetokinase family THEMA_RS05395 PF01515 Phosphate acetyl/butaryl transferase THEMA_RS05400 PF00871 Acetokinase family THEMA_RS05405 PF04851 Type III restriction enzyme, res subunit THEMA_RS05405 PF00271 Helicase conserved C-terminal domain THEMA_RS05405 PF12344 Ultra-violet resistance protein B THEMA_RS05405 PF17757 UvrB interaction domain THEMA_RS05405 PF02151 UvrB/uvrC motif THEMA_RS05415 PF03425 Carbohydrate binding domain (family 11) THEMA_RS05415 PF00150 Cellulase (glycosyl hydrolase family 5) THEMA_RS05415 PF00404 Dockerin type I domain THEMA_RS05420 PF00005 ABC transporter THEMA_RS05420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS05425 PF00005 ABC transporter THEMA_RS05425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS05430 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS05430 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_RS05435 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS05440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_RS05450 PF01212 Beta-eliminating lyase THEMA_RS05455 PF00248 Aldo/keto reductase family THEMA_RS05460 PF13344 Haloacid dehalogenase-like hydrolase THEMA_RS05465 PF08032 RNA 2'-O ribose methyltransferase substrate binding THEMA_RS05465 PF00588 SpoU rRNA Methylase family THEMA_RS05470 PF00636 Ribonuclease III domain THEMA_RS05480 PF02535 ZIP Zinc transporter THEMA_RS05485 PF01048 Phosphorylase superfamily THEMA_RS05490 PF03796 DnaB-like helicase C terminal domain THEMA_RS05490 PF00772 DnaB-like helicase N terminal domain THEMA_RS05500 PF01895 PhoU domain THEMA_RS05505 PF01513 ATP-NAD kinase THEMA_RS05510 PF02325 YGGT family THEMA_RS05515 PF01168 Alanine racemase, N-terminal domain THEMA_RS05520 PF17864 RuvB AAA lid domain THEMA_RS05520 PF05491 RuvB C-terminal winged helix domain THEMA_RS05520 PF05496 Holliday junction DNA helicase RuvB P-loop domain THEMA_RS05530 PF02548 Ketopantoate hydroxymethyltransferase THEMA_RS05540 PF01411 tRNA synthetases class II (A) THEMA_RS05540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THEMA_RS05540 PF02272 DHHA1 domain THEMA_RS05545 PF01813 ATP synthase subunit D THEMA_RS05555 PF01979 Amidohydrolase family THEMA_RS05570 PF13673 Acetyltransferase (GNAT) domain THEMA_RS05575 PF00488 MutS domain V THEMA_RS05575 PF05192 MutS domain III THEMA_RS05575 PF01624 MutS domain I THEMA_RS05575 PF05188 MutS domain II THEMA_RS05575 PF05190 MutS family domain IV THEMA_RS05580 PF00834 Ribulose-phosphate 3 epimerase family THEMA_RS05585 PF03193 RsgA GTPase THEMA_RS05585 PF16745 RsgA N-terminal domain THEMA_RS05595 PF04055 Radical SAM superfamily THEMA_RS05600 PF01565 FAD binding domain THEMA_RS05600 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain THEMA_RS05605 PF01205 Uncharacterized protein family UPF0029 THEMA_RS05605 PF09186 Domain of unknown function (DUF1949) THEMA_RS05620 PF03668 P-loop ATPase protein family THEMA_RS05625 PF01933 Uncharacterised protein family UPF0052 THEMA_RS05630 PF14527 WhiA LAGLIDADG-like domain THEMA_RS05630 PF02650 WhiA C-terminal HTH domain THEMA_RS05635 PF03477 ATP cone domain THEMA_RS05640 PF01272 Transcription elongation factor, GreA/GreB, C-term THEMA_RS05640 PF03449 Transcription elongation factor, N-terminal THEMA_RS05645 PF00152 tRNA synthetases class II (D, K and N) THEMA_RS05645 PF01336 OB-fold nucleic acid binding domain THEMA_RS05655 PF00884 Sulfatase THEMA_RS05665 PF01554 MatE THEMA_RS05680 PF00155 Aminotransferase class I and II THEMA_RS05685 PF10672 S-adenosylmethionine-dependent methyltransferase THEMA_RS05685 PF17785 PUA-like domain THEMA_RS05690 PF06750 Bacterial Peptidase A24 N-terminal domain THEMA_RS05690 PF01478 Type IV leader peptidase family THEMA_RS05700 PF02568 Thiamine biosynthesis protein (ThiI) THEMA_RS05700 PF02926 THUMP domain THEMA_RS05710 PF00266 Aminotransferase class-V THEMA_RS05720 PF04025 Domain of unknown function (DUF370) THEMA_RS05725 PF00625 Guanylate kinase THEMA_RS05730 PF01192 RNA polymerase Rpb6 THEMA_RS05735 PF04127 DNA / pantothenate metabolism flavoprotein THEMA_RS05735 PF02441 Flavoprotein THEMA_RS05740 PF01476 LysM domain THEMA_RS05740 PF03734 L,D-transpeptidase catalytic domain THEMA_RS05745 PF00575 S1 RNA binding domain THEMA_RS05745 PF03725 3' exoribonuclease family, domain 2 THEMA_RS05745 PF01138 3' exoribonuclease family, domain 1 THEMA_RS05745 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain THEMA_RS05745 PF00013 KH domain THEMA_RS05750 PF01197 Ribosomal protein L31 THEMA_RS05755 PF00313 'Cold-shock' DNA-binding domain THEMA_RS05760 PF00072 Response regulator receiver domain THEMA_RS05780 PF01966 HD domain THEMA_RS05780 PF11871 Domain of unknown function (DUF3391) THEMA_RS05810 PF01312 FlhB HrpN YscU SpaS Family THEMA_RS05840 PF01261 Xylose isomerase-like TIM barrel THEMA_RS05845 PF07687 Peptidase dimerisation domain THEMA_RS05845 PF01546 Peptidase family M20/M25/M40 THEMA_RS05855 PF05175 Methyltransferase small domain THEMA_RS05860 PF00005 ABC transporter THEMA_RS05865 PF01975 Survival protein SurE THEMA_RS05870 PF01327 Polypeptide deformylase THEMA_RS05885 PF00438 S-adenosylmethionine synthetase, N-terminal domain THEMA_RS05885 PF02773 S-adenosylmethionine synthetase, C-terminal domain THEMA_RS05885 PF02772 S-adenosylmethionine synthetase, central domain THEMA_RS05890 PF01649 Ribosomal protein S20 THEMA_RS05900 PF00486 Transcriptional regulatory protein, C terminal THEMA_RS05900 PF00072 Response regulator receiver domain THEMA_RS05905 PF16736 Single Cache-like THEMA_RS05905 PF00989 PAS fold THEMA_RS05905 PF00512 His Kinase A (phospho-acceptor) domain THEMA_RS05905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_RS05910 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain THEMA_RS05910 PF02885 Glycosyl transferase family, helical bundle domain THEMA_RS05910 PF00591 Glycosyl transferase family, a/b domain THEMA_RS05920 PF00009 Elongation factor Tu GTP binding domain THEMA_RS05920 PF03764 Elongation factor G, domain IV THEMA_RS05920 PF14492 Elongation Factor G, domain II THEMA_RS05920 PF00679 Elongation factor G C-terminus THEMA_RS05925 PF00128 Alpha amylase, catalytic domain THEMA_RS05935 PF01966 HD domain THEMA_RS05950 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain THEMA_RS05950 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain THEMA_RS05955 PF02445 Quinolinate synthetase A protein THEMA_RS05960 PF03447 Homoserine dehydrogenase, NAD binding domain THEMA_RS05960 PF01958 Domain of unknown function DUF108 THEMA_RS05965 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain THEMA_RS05965 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain THEMA_RS05965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THEMA_RS05965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THEMA_RS05970 PF00186 Dihydrofolate reductase THEMA_RS05975 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THEMA_RS05975 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_RS05980 PF00175 Oxidoreductase NAD-binding domain THEMA_RS05980 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B THEMA_RS05980 PF00970 Oxidoreductase FAD-binding domain THEMA_RS05985 PF00005 ABC transporter THEMA_RS05995 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system THEMA_RS06000 PF00149 Calcineurin-like phosphoesterase THEMA_RS06000 PF12320 Type 5 capsule protein repressor C-terminal domain THEMA_RS06010 PF05362 Lon protease (S16) C-terminal proteolytic domain THEMA_RS06010 PF02190 ATP-dependent protease La (LON) substrate-binding domain THEMA_RS06010 PF00004 ATPase family associated with various cellular activities (AAA) THEMA_RS06015 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE THEMA_RS06030 PF12804 MobA-like NTP transferase domain THEMA_RS06030 PF14602 Hexapeptide repeat of succinyl-transferase THEMA_RS06030 PF00132 Bacterial transferase hexapeptide (six repeats) THEMA_RS06035 PF14572 Phosphoribosyl synthetase-associated domain THEMA_RS06035 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase THEMA_RS06040 PF01386 Ribosomal L25p family THEMA_RS06040 PF14693 Ribosomal protein TL5, C-terminal domain THEMA_RS06045 PF01195 Peptidyl-tRNA hydrolase THEMA_RS06055 PF02837 Glycosyl hydrolases family 2, sugar binding domain THEMA_RS06055 PF16353 Domain of unknown function(DUF4981) THEMA_RS06055 PF00703 Glycosyl hydrolases family 2 THEMA_RS06055 PF02929 Beta galactosidase small chain THEMA_RS06055 PF02836 Glycosyl hydrolases family 2, TIM barrel domain THEMA_RS06060 PF03144 Elongation factor Tu domain 2 THEMA_RS06060 PF00679 Elongation factor G C-terminus THEMA_RS06060 PF00009 Elongation factor Tu GTP binding domain THEMA_RS06060 PF06421 GTP-binding protein LepA C-terminus THEMA_RS06070 PF03009 Glycerophosphoryl diester phosphodiesterase family THEMA_RS06075 PF02627 Carboxymuconolactone decarboxylase family THEMA_RS06080 PF00476 DNA polymerase family A THEMA_RS06080 PF01612 3'-5' exonuclease THEMA_RS06080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain THEMA_RS06080 PF01367 5'-3' exonuclease, C-terminal SAM fold THEMA_RS06085 PF13690 Chemotaxis phosphatase CheX THEMA_RS06100 PF00119 ATP synthase A chain THEMA_RS06105 PF00137 ATP synthase subunit C THEMA_RS06110 PF00430 ATP synthase B/B' CF(0) THEMA_RS06115 PF00213 ATP synthase delta (OSCP) subunit THEMA_RS06120 PF02874 ATP synthase alpha/beta family, beta-barrel domain THEMA_RS06120 PF00306 ATP synthase alpha/beta chain, C terminal domain THEMA_RS06120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THEMA_RS06125 PF00231 ATP synthase THEMA_RS06130 PF02874 ATP synthase alpha/beta family, beta-barrel domain THEMA_RS06130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THEMA_RS06135 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain THEMA_RS06140 PF02645 Uncharacterised protein, DegV family COG1307 THEMA_RS06145 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein THEMA_RS06145 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus THEMA_RS06150 PF00575 S1 RNA binding domain THEMA_RS06150 PF10150 Ribonuclease E/G family THEMA_RS06155 PF00889 Elongation factor TS THEMA_RS06160 PF00696 Amino acid kinase family THEMA_RS06165 PF07690 Major Facilitator Superfamily THEMA_RS06170 PF02829 3H domain THEMA_RS06170 PF08279 HTH domain THEMA_RS06175 PF04055 Radical SAM superfamily THEMA_RS06175 PF18693 TRAM domain THEMA_RS06175 PF00919 Uncharacterized protein family UPF0004 THEMA_RS06190 PF08281 Sigma-70, region 4 THEMA_RS06190 PF04542 Sigma-70 region 2 THEMA_RS06195 PF01168 Alanine racemase, N-terminal domain THEMA_RS06200 PF01048 Phosphorylase superfamily THEMA_RS06205 PF01368 DHH family THEMA_RS06205 PF02272 DHHA1 domain THEMA_RS06210 PF05230 MASE2 domain THEMA_RS06210 PF00990 Diguanylate cyclase, GGDEF domain THEMA_RS06215 PF10609 NUBPL iron-transfer P-loop NTPase THEMA_RS06220 PF00453 Ribosomal protein L20 THEMA_RS06225 PF01632 Ribosomal protein L35 THEMA_RS06230 PF00707 Translation initiation factor IF-3, C-terminal domain THEMA_RS06230 PF05198 Translation initiation factor IF-3, N-terminal domain THEMA_RS06265 PF00990 Diguanylate cyclase, GGDEF domain THEMA_RS06280 PF13660 Domain of unknown function (DUF4147) THEMA_RS06280 PF05161 MOFRL family THEMA_RS06285 PF00156 Phosphoribosyl transferase domain THEMA_RS06305 PF00158 Sigma-54 interaction domain THEMA_RS06305 PF00072 Response regulator receiver domain THEMA_RS06305 PF02954 Bacterial regulatory protein, Fis family THEMA_RS06310 PF03462 PCRF domain THEMA_RS06310 PF00472 RF-1 domain THEMA_RS06315 PF00271 Helicase conserved C-terminal domain THEMA_RS06315 PF07517 SecA DEAD-like domain THEMA_RS06315 PF01043 SecA preprotein cross-linking domain THEMA_RS06315 PF07516 SecA Wing and Scaffold domain THEMA_RS06325 PF01728 FtsJ-like methyltransferase THEMA_RS06325 PF01479 S4 domain THEMA_RS06335 PF01416 tRNA pseudouridine synthase THEMA_RS06345 PF10502 Signal peptidase, peptidase S26 THEMA_RS06350 PF01245 Ribosomal protein L19 THEMA_RS06355 PF09936 SAM-dependent RNA methyltransferase THEMA_RS06360 PF01746 tRNA (Guanine-1)-methyltransferase THEMA_RS06365 PF05239 PRC-barrel domain THEMA_RS06365 PF01782 RimM N-terminal domain THEMA_RS06375 PF00886 Ribosomal protein S16 THEMA_RS06380 PF00448 SRP54-type protein, GTPase domain THEMA_RS06380 PF02881 SRP54-type protein, helical bundle domain THEMA_RS06380 PF02978 Signal peptide binding domain THEMA_RS06385 PF00708 Acylphosphatase THEMA_RS06400 PF01702 Queuine tRNA-ribosyltransferase THEMA_RS06410 PF01791 DeoC/LacD family aldolase THEMA_RS06420 PF04002 RadC-like JAB domain THEMA_RS06425 PF02545 Maf-like protein THEMA_RS06440 PF02424 ApbE family THEMA_RS06450 PF01871 AMMECR1 THEMA_RS06455 PF07136 Protein of unknown function (DUF1385) THEMA_RS06460 PF00953 Glycosyl transferase family 4 THEMA_RS06465 PF02719 Polysaccharide biosynthesis protein THEMA_RS06470 PF01966 HD domain THEMA_RS06475 PF17768 RecJ OB domain THEMA_RS06475 PF10141 Single-strand DNA-specific exonuclease, C terminal domain THEMA_RS06475 PF01368 DHH family THEMA_RS06475 PF02272 DHHA1 domain THEMA_RS06495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEMA_RS06495 PF00460 Flagella basal body rod protein THEMA_RS06500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEMA_RS06500 PF00460 Flagella basal body rod protein THEMA_RS06510 PF02107 Flagellar L-ring protein THEMA_RS06515 PF02119 Flagellar P-ring protein THEMA_RS06525 PF04055 Radical SAM superfamily THEMA_RS06525 PF02310 B12 binding domain THEMA_RS06535 PF00348 Polyprenyl synthetase THEMA_RS06555 PF01012 Electron transfer flavoprotein domain THEMA_RS06555 PF00766 Electron transfer flavoprotein FAD-binding domain THEMA_RS06560 PF01012 Electron transfer flavoprotein domain THEMA_RS06570 PF01040 UbiA prenyltransferase family THEMA_RS06575 PF02082 Transcriptional regulator THEMA_RS06605 PF02774 Semialdehyde dehydrogenase, dimerisation domain THEMA_RS06605 PF01118 Semialdehyde dehydrogenase, NAD binding domain THEMA_RS06610 PF01678 Diaminopimelate epimerase THEMA_RS06615 PF00701 Dihydrodipicolinate synthetase family THEMA_RS06620 PF01113 Dihydrodipicolinate reductase, N-terminus THEMA_RS06620 PF05173 Dihydrodipicolinate reductase, C-terminus THEMA_RS06625 PF00132 Bacterial transferase hexapeptide (six repeats) THEMA_RS06625 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal THEMA_RS06625 PF14602 Hexapeptide repeat of succinyl-transferase THEMA_RS06630 PF13840 ACT domain THEMA_RS06630 PF00696 Amino acid kinase family THEMA_RS06630 PF01842 ACT domain THEMA_RS06635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THEMA_RS06635 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THEMA_RS06640 PF07687 Peptidase dimerisation domain THEMA_RS06640 PF01546 Peptidase family M20/M25/M40 THEMA_RS06655 PF05636 HIGH Nucleotidyl Transferase THEMA_RS06660 PF01189 16S rRNA methyltransferase RsmB/F THEMA_RS06660 PF01029 NusB family THEMA_RS06665 PF04298 Putative neutral zinc metallopeptidase THEMA_RS06675 PF02130 Uncharacterized protein family UPF0054 THEMA_RS06680 PF07697 7TM-HD extracellular THEMA_RS06680 PF07698 7TM receptor with intracellular HD hydrolase THEMA_RS06680 PF01966 HD domain THEMA_RS06685 PF02562 PhoH-like protein THEMA_RS06695 PF00164 Ribosomal protein S12/S23 THEMA_RS06700 PF00177 Ribosomal protein S7p/S5e THEMA_RS06705 PF03764 Elongation factor G, domain IV THEMA_RS06705 PF03144 Elongation factor Tu domain 2 THEMA_RS06705 PF00009 Elongation factor Tu GTP binding domain THEMA_RS06705 PF14492 Elongation Factor G, domain II THEMA_RS06705 PF00679 Elongation factor G C-terminus THEMA_RS06710 PF03144 Elongation factor Tu domain 2 THEMA_RS06710 PF03143 Elongation factor Tu C-terminal domain THEMA_RS06710 PF00009 Elongation factor Tu GTP binding domain THEMA_RS06715 PF00338 Ribosomal protein S10p/S20e THEMA_RS06720 PF00297 Ribosomal protein L3 THEMA_RS06725 PF00573 Ribosomal protein L4/L1 family THEMA_RS06730 PF00276 Ribosomal protein L23 THEMA_RS06735 PF03947 Ribosomal Proteins L2, C-terminal domain THEMA_RS06735 PF00181 Ribosomal Proteins L2, RNA binding domain THEMA_RS06740 PF00203 Ribosomal protein S19 THEMA_RS06745 PF00237 Ribosomal protein L22p/L17e THEMA_RS06750 PF00189 Ribosomal protein S3, C-terminal domain THEMA_RS06750 PF07650 KH domain THEMA_RS06755 PF00252 Ribosomal protein L16p/L10e THEMA_RS06760 PF00831 Ribosomal L29 protein THEMA_RS06765 PF00366 Ribosomal protein S17 THEMA_RS06770 PF00238 Ribosomal protein L14p/L23e THEMA_RS06775 PF00467 KOW motif THEMA_RS06775 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 THEMA_RS06780 PF00281 Ribosomal protein L5 THEMA_RS06780 PF00673 ribosomal L5P family C-terminus THEMA_RS06785 PF00253 Ribosomal protein S14p/S29e THEMA_RS06790 PF00410 Ribosomal protein S8 THEMA_RS06795 PF00347 Ribosomal protein L6 THEMA_RS06800 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast THEMA_RS06805 PF03719 Ribosomal protein S5, C-terminal domain THEMA_RS06805 PF00333 Ribosomal protein S5, N-terminal domain THEMA_RS06810 PF00327 Ribosomal protein L30p/L7e THEMA_RS06815 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A THEMA_RS06820 PF00344 SecY translocase THEMA_RS06825 PF05191 Adenylate kinase, active site lid THEMA_RS06830 PF00557 Metallopeptidase family M24 THEMA_RS06835 PF01176 Translation initiation factor 1A / IF-1 THEMA_RS06840 PF00444 Ribosomal protein L36 THEMA_RS06845 PF00416 Ribosomal protein S13/S18 THEMA_RS06850 PF00411 Ribosomal protein S11 THEMA_RS06855 PF00163 Ribosomal protein S4/S9 N-terminal domain THEMA_RS06855 PF01479 S4 domain THEMA_RS06860 PF01000 RNA polymerase Rpb3/RpoA insert domain THEMA_RS06860 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain THEMA_RS06860 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain THEMA_RS06865 PF01196 Ribosomal protein L17 THEMA_RS06870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THEMA_RS06870 PF07498 Rho termination factor, N-terminal domain THEMA_RS06870 PF07497 Rho termination factor, RNA-binding domain THEMA_RS06875 PF00480 ROK family THEMA_RS06880 PF02645 Uncharacterised protein, DegV family COG1307 THEMA_RS06885 PF17248 Family of unknown function (DUF5317) THEMA_RS06890 PF01966 HD domain THEMA_RS06895 PF01926 50S ribosome-binding GTPase THEMA_RS06900 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP THEMA_RS06900 PF12557 Cob(I)alamin adenosyltransferase N terminal THEMA_RS06905 PF04227 Indigoidine synthase A like protein THEMA_RS06910 PF00468 Ribosomal protein L34 THEMA_RS06915 PF00825 Ribonuclease P THEMA_RS06920 PF01809 Putative membrane protein insertion efficiency factor THEMA_RS06925 PF02096 60Kd inner membrane protein THEMA_RS06940 PF00829 Ribosomal prokaryotic L21 protein THEMA_RS06950 PF01016 Ribosomal L27 protein THEMA_RS06955 PF12822 ECF transporter, substrate-specific component THEMA_RS06960 PF00572 Ribosomal protein L13 THEMA_RS06965 PF00380 Ribosomal protein S9/S16 THEMA_RS06970 PF08275 DNA primase catalytic core, N-terminal domain THEMA_RS06970 PF01807 CHC2 zinc finger THEMA_RS06975 PF03979 Sigma-70 factor, region 1.1 THEMA_RS06975 PF04545 Sigma-70, region 4 THEMA_RS06975 PF04542 Sigma-70 region 2 THEMA_RS06975 PF00140 Sigma-70 factor, region 1.2 THEMA_RS06975 PF04539 Sigma-70 region 3 THEMA_RS06980 PF00271 Helicase conserved C-terminal domain THEMA_RS06980 PF17757 UvrB interaction domain THEMA_RS06980 PF03461 TRCF domain THEMA_RS06980 PF00270 DEAD/DEAH box helicase THEMA_RS06980 PF02559 CarD-like/TRCF domain THEMA_RS06995 PF02660 Glycerol-3-phosphate acyltransferase THEMA_RS07000 PF01926 50S ribosome-binding GTPase THEMA_RS07000 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal THEMA_RS07005 PF00575 S1 RNA binding domain THEMA_RS07010 PF02401 LytB protein THEMA_RS07015 PF02224 Cytidylate kinase THEMA_RS07020 PF01740 STAS domain THEMA_RS07025 PF00152 tRNA synthetases class II (D, K and N) THEMA_RS07025 PF01336 OB-fold nucleic acid binding domain THEMA_RS07025 PF02938 GAD domain THEMA_RS07030 PF03061 Thioesterase superfamily THEMA_RS07030 PF01008 Initiation factor 2 subunit family THEMA_RS07040 PF09210 Domain of unknown function (DUF1957) THEMA_RS07040 PF03065 Glycosyl hydrolase family 57 THEMA_RS07045 PF00398 Ribosomal RNA adenine dimethylase THEMA_RS07065 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_RS07065 PF04324 BFD-like [2Fe-2S] binding domain THEMA_RS07070 PF04324 BFD-like [2Fe-2S] binding domain THEMA_RS07070 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_RS07075 PF04309 Glycerol-3-phosphate responsive antiterminator THEMA_RS07080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THEMA_RS07080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THEMA_RS07085 PF00230 Major intrinsic protein THEMA_RS07090 PF17200 Single Cache domain 2 THEMA_RS07090 PF00672 HAMP domain THEMA_RS07090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_RS07095 PF06971 Putative DNA-binding protein N-terminus THEMA_RS07095 PF02629 CoA binding domain THEMA_RS07100 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THEMA_RS07100 PF00037 4Fe-4S binding domain THEMA_RS07100 PF02256 Iron hydrogenase small subunit THEMA_RS07100 PF02906 Iron only hydrogenase large subunit, C-terminal domain THEMA_RS07105 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THEMA_RS07105 PF00037 4Fe-4S binding domain THEMA_RS07105 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THEMA_RS07140 PF01066 CDP-alcohol phosphatidyltransferase THEMA_RS07140 PF00483 Nucleotidyl transferase THEMA_RS07145 PF00005 ABC transporter THEMA_RS07150 PF01458 Uncharacterized protein family (UPF0051) THEMA_RS07160 PF00459 Inositol monophosphatase family THEMA_RS07165 PF00251 Glycosyl hydrolases family 32 N-terminal domain THEMA_RS07165 PF08244 Glycosyl hydrolases family 32 C terminal THEMA_RS07185 PF03537 Glycoside-hydrolase family GH114 THEMA_RS07210 PF13439 Glycosyltransferase Family 4 THEMA_RS07210 PF00534 Glycosyl transferases group 1 THEMA_RS07215 PF01061 ABC-2 type transporter THEMA_RS07220 PF13732 Domain of unknown function (DUF4162) THEMA_RS07220 PF00005 ABC transporter THEMA_RS07230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THEMA_RS07230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THEMA_RS07235 PF00266 Aminotransferase class-V THEMA_RS07240 PF01765 Ribosome recycling factor THEMA_RS07245 PF01255 Putative undecaprenyl diphosphate synthase THEMA_RS07255 PF02272 DHHA1 domain THEMA_RS07255 PF01411 tRNA synthetases class II (A) THEMA_RS07255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THEMA_RS07265 PF01430 Hsp33 protein THEMA_RS07270 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase THEMA_RS07280 PF07724 AAA domain (Cdc48 subfamily) THEMA_RS07280 PF00004 ATPase family associated with various cellular activities (AAA) THEMA_RS07280 PF17871 AAA lid domain THEMA_RS07280 PF10431 C-terminal, D2-small domain, of ClpB protein THEMA_RS07280 PF02861 Clp amino terminal domain, pathogenicity island component THEMA_RS07310 PF01121 Dephospho-CoA kinase THEMA_RS07320 PF00342 Phosphoglucose isomerase THEMA_RS07325 PF00156 Phosphoribosyl transferase domain THEMA_RS07330 PF00288 GHMP kinases N terminal domain THEMA_RS07345 PF04452 RNA methyltransferase THEMA_RS07350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THEMA_RS07350 PF02403 Seryl-tRNA synthetase N-terminal domain THEMA_RS07355 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS07360 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS07365 PF00005 ABC transporter THEMA_RS07365 PF08402 TOBE domain THEMA_RS07370 PF13416 Bacterial extracellular solute-binding protein THEMA_RS07380 PF00300 Histidine phosphatase superfamily (branch 1) THEMA_RS07390 PF01592 NifU-like N terminal domain THEMA_RS07395 PF00266 Aminotransferase class-V THEMA_RS07400 PF01458 Uncharacterized protein family (UPF0051) THEMA_RS07405 PF01458 Uncharacterized protein family (UPF0051) THEMA_RS07410 PF00005 ABC transporter THEMA_RS07425 PF02049 Flagellar hook-basal body complex protein FliE THEMA_RS07430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEMA_RS07430 PF00460 Flagella basal body rod protein THEMA_RS07435 PF00460 Flagella basal body rod protein THEMA_RS07440 PF03462 PCRF domain THEMA_RS07440 PF00472 RF-1 domain THEMA_RS07445 PF00437 Type II/IV secretion system protein THEMA_RS07450 PF06827 Zinc finger found in FPG and IleRS THEMA_RS07450 PF00133 tRNA synthetases class I (I, L, M and V) THEMA_RS07450 PF08264 Anticodon-binding domain of tRNA THEMA_RS07455 PF00486 Transcriptional regulatory protein, C terminal THEMA_RS07455 PF00072 Response regulator receiver domain THEMA_RS07460 PF00989 PAS fold THEMA_RS07460 PF00512 His Kinase A (phospho-acceptor) domain THEMA_RS07460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_RS07470 PF01139 tRNA-splicing ligase RtcB THEMA_RS07485 PF00478 IMP dehydrogenase / GMP reductase domain THEMA_RS07485 PF00571 CBS domain THEMA_RS07500 PF00749 tRNA synthetases class I (E and Q), catalytic domain THEMA_RS07505 PF12146 Serine aminopeptidase, S33 THEMA_RS07510 PF01594 AI-2E family transporter THEMA_RS07520 PF00478 IMP dehydrogenase / GMP reductase domain THEMA_RS07520 PF00571 CBS domain THEMA_RS07525 PF00675 Insulinase (Peptidase family M16) THEMA_RS07525 PF05193 Peptidase M16 inactive domain THEMA_RS07530 PF00575 S1 RNA binding domain THEMA_RS07530 PF01138 3' exoribonuclease family, domain 1 THEMA_RS07530 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain THEMA_RS07530 PF00013 KH domain THEMA_RS07530 PF03725 3' exoribonuclease family, domain 2 THEMA_RS07535 PF00312 Ribosomal protein S15 THEMA_RS07560 PF00355 Rieske [2Fe-2S] domain THEMA_RS07620 PF00664 ABC transporter transmembrane region THEMA_RS07620 PF00005 ABC transporter THEMA_RS07625 PF00005 ABC transporter THEMA_RS07635 PF04055 Radical SAM superfamily THEMA_RS07635 PF06463 Molybdenum Cofactor Synthesis C THEMA_RS07640 PF13186 Iron-sulfur cluster-binding domain THEMA_RS07640 PF04055 Radical SAM superfamily THEMA_RS07655 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system THEMA_RS07665 PF00005 ABC transporter THEMA_RS07665 PF00664 ABC transporter transmembrane region THEMA_RS07670 PF00664 ABC transporter transmembrane region THEMA_RS07670 PF00005 ABC transporter THEMA_RS07690 PF00931 NB-ARC domain THEMA_RS07690 PF13176 Tetratricopeptide repeat THEMA_RS07695 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system THEMA_RS07710 PF00664 ABC transporter transmembrane region THEMA_RS07710 PF00005 ABC transporter THEMA_RS07745 PF00005 ABC transporter THEMA_RS07765 PF00248 Aldo/keto reductase family THEMA_RS07775 PF16123 Hydroxyacylglutathione hydrolase C-terminus THEMA_RS07775 PF00753 Metallo-beta-lactamase superfamily THEMA_RS07785 PF01209 ubiE/COQ5 methyltransferase family THEMA_RS07790 PF10609 NUBPL iron-transfer P-loop NTPase THEMA_RS07795 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THEMA_RS07810 PF04055 Radical SAM superfamily THEMA_RS07810 PF01926 50S ribosome-binding GTPase THEMA_RS07810 PF01018 GTP1/OBG THEMA_RS07815 PF07883 Cupin domain THEMA_RS07820 PF08267 Cobalamin-independent synthase, N-terminal domain THEMA_RS07820 PF01717 Cobalamin-independent synthase, Catalytic domain THEMA_RS07830 PF00355 Rieske [2Fe-2S] domain THEMA_RS07835 PF02660 Glycerol-3-phosphate acyltransferase THEMA_RS07845 PF00535 Glycosyl transferase family 2 THEMA_RS07850 PF02056 Family 4 glycosyl hydrolase THEMA_RS07850 PF11975 Family 4 glycosyl hydrolase C-terminal domain THEMA_RS07865 PF01713 Smr domain THEMA_RS07865 PF00488 MutS domain V THEMA_RS07870 PF02491 SHS2 domain inserted in FTSA THEMA_RS07875 PF17912 MalK OB fold domain THEMA_RS07875 PF03459 TOBE domain THEMA_RS07875 PF00005 ABC transporter THEMA_RS07890 PF02934 GatB/GatE catalytic domain THEMA_RS07890 PF02637 GatB domain THEMA_RS07895 PF01425 Amidase THEMA_RS07900 PF07963 Prokaryotic N-terminal methylation motif THEMA_RS07900 PF00114 Pilin (bacterial filament) THEMA_RS07905 PF01053 Cys/Met metabolism PLP-dependent enzyme THEMA_RS07910 PF06968 Biotin and Thiamin Synthesis associated domain THEMA_RS07910 PF04055 Radical SAM superfamily THEMA_RS07935 PF12849 PBP superfamily domain THEMA_RS07945 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS07950 PF00005 ABC transporter THEMA_RS07955 PF01895 PhoU domain THEMA_RS07960 PF00072 Response regulator receiver domain THEMA_RS07960 PF00486 Transcriptional regulatory protein, C terminal THEMA_RS07965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_RS07965 PF00512 His Kinase A (phospho-acceptor) domain THEMA_RS07975 PF00664 ABC transporter transmembrane region THEMA_RS07975 PF00005 ABC transporter THEMA_RS07980 PF00155 Aminotransferase class I and II THEMA_RS07985 PF13419 Haloacid dehalogenase-like hydrolase THEMA_RS07990 PF00795 Carbon-nitrogen hydrolase THEMA_RS07990 PF02540 NAD synthase THEMA_RS08000 PF00586 AIR synthase related protein, N-terminal domain THEMA_RS08000 PF02769 AIR synthase related protein, C-terminal domain THEMA_RS08005 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain THEMA_RS08005 PF02843 Phosphoribosylglycinamide synthetase, C domain THEMA_RS08005 PF02844 Phosphoribosylglycinamide synthetase, N domain THEMA_RS08010 PF02142 MGS-like domain THEMA_RS08010 PF01808 AICARFT/IMPCHase bienzyme THEMA_RS08015 PF00551 Formyl transferase THEMA_RS08020 PF00156 Phosphoribosyl transferase domain THEMA_RS08025 PF16904 Phosphoribosylformylglycinamidine synthase II C-terminus THEMA_RS08025 PF02769 AIR synthase related protein, C-terminal domain THEMA_RS08025 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain THEMA_RS08025 PF00586 AIR synthase related protein, N-terminal domain THEMA_RS08035 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase THEMA_RS08040 PF01259 SAICAR synthetase THEMA_RS08055 PF01926 50S ribosome-binding GTPase THEMA_RS08055 PF06071 Protein of unknown function (DUF933) THEMA_RS08065 PF13361 UvrD-like helicase C-terminal domain THEMA_RS08065 PF00580 UvrD/REP helicase N-terminal domain THEMA_RS08080 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08085 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08090 PF00005 ABC transporter THEMA_RS08090 PF08402 TOBE domain THEMA_RS08095 PF01074 Glycosyl hydrolases family 38 N-terminal domain THEMA_RS08095 PF07748 Glycosyl hydrolases family 38 C-terminal domain THEMA_RS08095 PF09261 Alpha mannosidase middle domain THEMA_RS08100 PF00534 Glycosyl transferases group 1 THEMA_RS08105 PF00535 Glycosyl transferase family 2 THEMA_RS08110 PF01418 Helix-turn-helix domain, rpiR family THEMA_RS08110 PF01380 SIS domain THEMA_RS08120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_RS08125 PF04041 beta-1,4-mannooligosaccharide phosphorylase THEMA_RS08130 PF01325 Iron dependent repressor, N-terminal DNA binding domain THEMA_RS08130 PF00480 ROK family THEMA_RS08135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_RS08140 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08145 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08145 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_RS08150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS08150 PF00005 ABC transporter THEMA_RS08155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS08155 PF00005 ABC transporter THEMA_RS08165 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THEMA_RS08165 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_RS08170 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THEMA_RS08175 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THEMA_RS08175 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THEMA_RS08180 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THEMA_RS08190 PF00361 Proton-conducting membrane transporter THEMA_RS08195 PF00361 Proton-conducting membrane transporter THEMA_RS08200 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L THEMA_RS08205 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter THEMA_RS08205 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THEMA_RS08205 PF13244 Domain of unknown function (DUF4040) THEMA_RS08205 PF00361 Proton-conducting membrane transporter THEMA_RS08220 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) THEMA_RS08225 PF01899 Na+/H+ ion antiporter subunit THEMA_RS08230 PF01547 Bacterial extracellular solute-binding protein THEMA_RS08235 PF14785 Maltose transport system permease protein MalF P2 domain THEMA_RS08235 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08240 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08245 PF07745 Glycosyl hydrolase family 53 THEMA_RS08260 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08265 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08265 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_RS08270 PF00005 ABC transporter THEMA_RS08270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS08275 PF08533 Beta-galactosidase C-terminal domain THEMA_RS08275 PF02449 Beta-galactosidase THEMA_RS08275 PF08532 Beta-galactosidase trimerisation domain THEMA_RS08280 PF00005 ABC transporter THEMA_RS08280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS08285 PF16353 Domain of unknown function(DUF4981) THEMA_RS08285 PF02836 Glycosyl hydrolases family 2, TIM barrel domain THEMA_RS08285 PF02929 Beta galactosidase small chain THEMA_RS08285 PF00703 Glycosyl hydrolases family 2 THEMA_RS08285 PF02837 Glycosyl hydrolases family 2, sugar binding domain THEMA_RS08295 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain THEMA_RS08295 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain THEMA_RS08300 PF08544 GHMP kinases C terminal THEMA_RS08300 PF00288 GHMP kinases N terminal domain THEMA_RS08300 PF10509 Galactokinase galactose-binding signature THEMA_RS08320 PF01594 AI-2E family transporter THEMA_RS08330 PF02142 MGS-like domain THEMA_RS08335 PF00563 EAL domain THEMA_RS08335 PF00990 Diguanylate cyclase, GGDEF domain THEMA_RS08335 PF03707 Bacterial signalling protein N terminal repeat THEMA_RS08340 PF00248 Aldo/keto reductase family THEMA_RS08345 PF06470 SMC proteins Flexible Hinge Domain THEMA_RS08345 PF02463 RecF/RecN/SMC N terminal domain THEMA_RS08350 PF00293 NUDIX domain THEMA_RS08360 PF02561 Flagellar protein FliS THEMA_RS08365 PF00583 Acetyltransferase (GNAT) family THEMA_RS08370 PF13419 Haloacid dehalogenase-like hydrolase THEMA_RS08395 PF03063 Prismane/CO dehydrogenase family THEMA_RS08405 PF00072 Response regulator receiver domain THEMA_RS08415 PF11897 Protein of unknown function (DUF3417) THEMA_RS08415 PF00343 Carbohydrate phosphorylase THEMA_RS08425 PF06969 HemN C-terminal domain THEMA_RS08425 PF04055 Radical SAM superfamily THEMA_RS08430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THEMA_RS08440 PF00990 Diguanylate cyclase, GGDEF domain THEMA_RS08440 PF17155 Gammaproteobacterial periplasmic sensor domain THEMA_RS08445 PF12706 Beta-lactamase superfamily domain THEMA_RS08450 PF01769 Divalent cation transporter THEMA_RS08450 PF00571 CBS domain THEMA_RS08450 PF03448 MgtE intracellular N domain THEMA_RS08470 PF00117 Glutamine amidotransferase class-I THEMA_RS08480 PF04024 PspC domain THEMA_RS08485 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain THEMA_RS08485 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain THEMA_RS08490 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase THEMA_RS08495 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08495 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_RS08500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS08500 PF00005 ABC transporter THEMA_RS08505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS08505 PF00005 ABC transporter THEMA_RS08510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_RS08520 PF00180 Isocitrate/isopropylmalate dehydrogenase THEMA_RS08525 PF01966 HD domain THEMA_RS08525 PF00072 Response regulator receiver domain THEMA_RS08530 PF00672 HAMP domain THEMA_RS08530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_RS08540 PF01966 HD domain THEMA_RS08550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_RS08560 PF02683 Cytochrome C biogenesis protein transmembrane region THEMA_RS08565 PF00478 IMP dehydrogenase / GMP reductase domain THEMA_RS08565 PF00571 CBS domain THEMA_RS08570 PF00005 ABC transporter THEMA_RS08575 PF00005 ABC transporter THEMA_RS08575 PF12399 Branched-chain amino acid ATP-binding cassette transporter THEMA_RS08580 PF11862 Domain of unknown function (DUF3382) THEMA_RS08580 PF02653 Branched-chain amino acid transport system / permease component THEMA_RS08585 PF02653 Branched-chain amino acid transport system / permease component THEMA_RS08605 PF07726 ATPase family associated with various cellular activities (AAA) THEMA_RS08605 PF17863 AAA lid domain THEMA_RS08610 PF00155 Aminotransferase class I and II THEMA_RS08615 PF01515 Phosphate acetyl/butaryl transferase THEMA_RS08620 PF01048 Phosphorylase superfamily THEMA_RS08625 PF00210 Ferritin-like domain THEMA_RS08650 PF02465 Flagellar hook-associated protein 2 N-terminus THEMA_RS08650 PF07195 Flagellar hook-associated protein 2 C-terminus THEMA_RS08650 PF07196 Flagellin hook IN motif THEMA_RS08655 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08660 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08665 PF13416 Bacterial extracellular solute-binding protein THEMA_RS08755 PF00035 Double-stranded RNA binding motif THEMA_RS08755 PF14622 Ribonuclease-III-like THEMA_RS08760 PF12850 Calcineurin-like phosphoesterase superfamily domain THEMA_RS08770 PF02223 Thymidylate kinase THEMA_RS08780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THEMA_RS08780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THEMA_RS08785 PF00709 Adenylosuccinate synthetase THEMA_RS08790 PF10397 Adenylosuccinate lyase C-terminus THEMA_RS08790 PF00206 Lyase THEMA_RS08795 PF05958 tRNA (Uracil-5-)-methyltransferase THEMA_RS08800 PF00750 tRNA synthetases class I (R) THEMA_RS08800 PF03485 Arginyl tRNA synthetase N terminal domain THEMA_RS08800 PF05746 DALR anticodon binding domain THEMA_RS08815 PF03129 Anticodon binding domain THEMA_RS08815 PF13393 Histidyl-tRNA synthetase THEMA_RS08820 PF02386 Cation transport protein THEMA_RS08830 PF02254 TrkA-N domain THEMA_RS08830 PF02080 TrkA-C domain THEMA_RS08845 PF01588 Putative tRNA binding domain THEMA_RS08845 PF09334 tRNA synthetases class I (M) THEMA_RS08845 PF08264 Anticodon-binding domain of tRNA THEMA_RS08850 PF00521 DNA gyrase/topoisomerase IV, subunit A THEMA_RS08850 PF03989 DNA gyrase C-terminal domain, beta-propeller THEMA_RS08855 PF01951 Archease protein family (MTH1598/TM1083) THEMA_RS08860 PF01726 LexA DNA binding domain THEMA_RS08860 PF00717 Peptidase S24-like THEMA_RS08865 PF01740 STAS domain THEMA_RS08870 PF02502 Ribose/Galactose Isomerase THEMA_RS08885 PF02569 Pantoate-beta-alanine ligase THEMA_RS08895 PF02540 NAD synthase THEMA_RS08895 PF00958 GMP synthase C terminal domain THEMA_RS08895 PF00117 Glutamine amidotransferase class-I THEMA_RS08905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THEMA_RS08905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THEMA_RS08915 PF01261 Xylose isomerase-like TIM barrel THEMA_RS08925 PF08220 DeoR-like helix-turn-helix domain THEMA_RS08925 PF00455 DeoR C terminal sensor domain THEMA_RS08930 PF11975 Family 4 glycosyl hydrolase C-terminal domain THEMA_RS08930 PF02056 Family 4 glycosyl hydrolase THEMA_RS08935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_RS08940 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08945 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_RS08945 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS08950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS08950 PF00005 ABC transporter THEMA_RS08955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_RS08955 PF00005 ABC transporter THEMA_RS08960 PF00703 Glycosyl hydrolases family 2 THEMA_RS08960 PF02836 Glycosyl hydrolases family 2, TIM barrel domain THEMA_RS08960 PF02837 Glycosyl hydrolases family 2, sugar binding domain THEMA_RS08975 PF04232 Stage V sporulation protein S (SpoVS) THEMA_RS08985 PF02254 TrkA-N domain THEMA_RS08985 PF07885 Ion channel THEMA_RS08990 PF03091 CutA1 divalent ion tolerance protein THEMA_RS09000 PF00005 ABC transporter THEMA_RS09010 PF10531 SLBB domain THEMA_RS09020 PF05343 M42 glutamyl aminopeptidase THEMA_RS09025 PF05343 M42 glutamyl aminopeptidase THEMA_RS09030 PF05343 M42 glutamyl aminopeptidase THEMA_RS09035 PF03775 Septum formation inhibitor MinC, C-terminal domain THEMA_RS09045 PF03600 Citrate transporter THEMA_RS09050 PF12323 Helix-turn-helix domain THEMA_RS09050 PF01385 Probable transposase THEMA_RS09050 PF07282 Putative transposase DNA-binding domain THEMA_RS09055 PF13393 Histidyl-tRNA synthetase THEMA_RS09060 PF01634 ATP phosphoribosyltransferase THEMA_RS09065 PF00815 Histidinol dehydrogenase THEMA_RS09070 PF00155 Aminotransferase class I and II THEMA_RS09075 PF00475 Imidazoleglycerol-phosphate dehydratase THEMA_RS09080 PF00117 Glutamine amidotransferase class-I THEMA_RS09085 PF00977 Histidine biosynthesis protein THEMA_RS09090 PF00977 Histidine biosynthesis protein THEMA_RS09095 PF01502 Phosphoribosyl-AMP cyclohydrolase THEMA_RS09095 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase THEMA_RS09100 PF02350 UDP-N-acetylglucosamine 2-epimerase THEMA_RS09105 PF01050 Mannose-6-phosphate isomerase THEMA_RS09105 PF00483 Nucleotidyl transferase THEMA_RS09115 PF00462 Glutaredoxin THEMA_RS09130 PF13732 Domain of unknown function (DUF4162) THEMA_RS09130 PF00005 ABC transporter THEMA_RS09165 PF12146 Serine aminopeptidase, S33 THEMA_RS09170 PF07690 Major Facilitator Superfamily THEMA_RS09195 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain THEMA_RS09195 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase THEMA_RS09225 PF00248 Aldo/keto reductase family THEMA_RS09235 PF00248 Aldo/keto reductase family THEMA_RS09240 PF12833 Helix-turn-helix domain THEMA_RS09240 PF06719 AraC-type transcriptional regulator N-terminus THEMA_RS09270 PF05168 HEPN domain THEMA_RS09320 PF00271 Helicase conserved C-terminal domain THEMA_RS09320 PF00176 SNF2 family N-terminal domain THEMA_RS09340 PF06672 Protein of unknown function (DUF1175) THEMA_RS09350 PF07678 A-macroglobulin TED domain THEMA_RS09350 PF01835 MG2 domain THEMA_RS09350 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain THEMA_RS09350 PF07703 Alpha-2-macroglobulin bait region domain THEMA_RS09350 PF00207 Alpha-2-macroglobulin family THEMA_RS09355 PF01206 Sulfurtransferase TusA THEMA_RS09360 PF04143 Sulphur transport THEMA_RS09380 PF01206 Sulfurtransferase TusA THEMA_RS09405 PF00990 Diguanylate cyclase, GGDEF domain THEMA_RS09430 PF00589 Phage integrase family THEMA_RS09430 PF02899 Phage integrase, N-terminal SAM-like domain THEMA_RS09435 PF02540 NAD synthase THEMA_RS09440 PF00731 AIR carboxylase THEMA_RS09445 PF01969 Protein of unknown function DUF111 THEMA_RS09460 PF04011 LemA family THEMA_RS09465 PF00294 pfkB family carbohydrate kinase THEMA_RS09470 PF05025 RbsD / FucU transport protein family THEMA_RS09475 PF13407 Periplasmic binding protein domain THEMA_RS09485 PF00005 ABC transporter THEMA_RS09490 PF02653 Branched-chain amino acid transport system / permease component THEMA_RS09495 PF00456 Transketolase, thiamine diphosphate binding domain THEMA_RS09500 PF02779 Transketolase, pyrimidine binding domain THEMA_RS09500 PF02780 Transketolase, C-terminal domain THEMA_RS09505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THEMA_RS09505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THEMA_RS09520 PF00356 Bacterial regulatory proteins, lacI family THEMA_RS09550 PF03951 Glutamine synthetase, beta-Grasp domain THEMA_RS09550 PF00120 Glutamine synthetase, catalytic domain THEMA_RS09570 PF00849 RNA pseudouridylate synthase THEMA_RS09570 PF01479 S4 domain THEMA_RS09575 PF02261 Aspartate decarboxylase THEMA_RS09590 PF01979 Amidohydrolase family THEMA_RS09595 PF00478 IMP dehydrogenase / GMP reductase domain THEMA_RS09595 PF00571 CBS domain THEMA_RS09600 PF03600 Citrate transporter THEMA_RS09625 PF13203 Putative metallopeptidase domain THEMA_RS09625 PF09967 VWA-like domain (DUF2201) THEMA_RS09630 PF16236 Domain of unknown function (DUF4895) THEMA_RS09665 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_RS09680 PF01252 Signal peptidase (SPase) II THEMA_RS09730 PF03652 Holliday junction resolvase THEMA_RS09805 PF13426 PAS domain THEMA_RS09805 PF08447 PAS fold THEMA_RS09805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain