TM0005 PF13086 AAA domain TM0005 PF13087 AAA domain TM0006 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TM0006 PF13378 Enolase C-terminal domain-like TM0007 PF01841 Transglutaminase-like superfamily TM0008 PF04199 Putative cyclase TM0009 PF02915 Rubrerythrin TM0010 PF00037 4Fe-4S binding domain TM0010 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin TM0010 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TM0010 PF10531 SLBB domain TM0010 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TM0012 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin TM0013 PF00753 Metallo-beta-lactamase superfamily TM0014 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM0015 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TM0016 PF14697 4Fe-4S dicluster domain TM0017 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TM0017 PF17147 TM0017 TM0018 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TM0019 PF13561 Enoyl-(Acyl carrier protein) reductase TM0020 PF02537 TM0020 TM0021 PF02641 Uncharacterized ACR, COG1993 TM0022 PF01119 DNA mismatch repair protein, C-terminal domain TM0022 PF08676 MutL C terminal dimerisation domain TM0022 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM0023 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM0023 PF02743 Cache domain TM0024 PF00722 Glycosyl hydrolases family 16 TM0024 PF02018 Carbohydrate binding domain TM0025 PF00933 Glycosyl hydrolase family 3 N terminal domain TM0025 PF01915 Glycosyl hydrolase family 3 C-terminal domain TM0025 PF14310 Fibronectin type III-like domain TM0027 PF00005 ABC transporter TM0028 PF00005 ABC transporter TM0028 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM0029 PF00528 Binding-protein-dependent transport system inner membrane component TM0029 PF12911 TM0029 TM0030 PF00528 Binding-protein-dependent transport system inner membrane component TM0031 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM0032 PF00480 ROK family TM0032 PF13412 Winged helix-turn-helix DNA-binding TM0033 PF02230 Phospholipase/Carboxylesterase TM0034 PF00037 4Fe-4S binding domain TM0034 PF04015 TM0034 TM0036 PF03266 NTPase TM0037 PF01966 HD domain TM0038 PF01242 6-pyruvoyl tetrahydropterin synthase TM0039 PF02649 Type I GTP cyclohydrolase folE2 TM0040 PF00809 Pterin binding enzyme TM0041 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TM0042 PF00557 Metallopeptidase family M24 TM0042 PF01321 Creatinase/Prolidase N-terminal domain TM0043 PF00005 ABC transporter TM0043 PF00664 ABC transporter transmembrane region TM0047 PF01385 TM0047 TM0047 PF07282 TM0047 TM0048 PF01797 Transposase IS200 like TM0049 PF00037 4Fe-4S binding domain TM0049 PF04015 TM0049 TM0050 PF04023 FeoA domain TM0051 PF02421 Ferrous iron transport protein B TM0051 PF07664 TM0051 TM0051 PF07670 Nucleoside recognition TM0053 PF07819 PGAP1-like protein TM0055 PF03648 Glycosyl hydrolase family 67 N-terminus TM0055 PF07477 Glycosyl hydrolase family 67 C-terminus TM0055 PF07488 Glycosyl hydrolase family 67 middle domain TM0056 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM0057 PF00005 ABC transporter TM0057 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM0058 PF00005 ABC transporter TM0058 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM0059 PF00528 Binding-protein-dependent transport system inner membrane component TM0059 PF12911 TM0059 TM0060 PF00528 Binding-protein-dependent transport system inner membrane component TM0061 PF00331 Glycosyl hydrolase family 10 TM0061 PF02018 Carbohydrate binding domain TM0061 PF06452 Domain of unknown function (DUF1083) TM0062 PF02018 Carbohydrate binding domain TM0064 PF02614 Glucuronate isomerase TM0065 PF01614 Bacterial transcriptional regulator TM0065 PF09339 IclR helix-turn-helix domain TM0066 PF01081 KDPG and KHG aldolase TM0067 PF00294 pfkB family carbohydrate kinase TM0068 PF01232 Mannitol dehydrogenase Rossmann domain TM0068 PF08125 Mannitol dehydrogenase C-terminal domain TM0069 PF03786 D-mannonate dehydratase (UxuA) TM0070 PF00331 Glycosyl hydrolase family 10 TM0071 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM0072 PF00528 Binding-protein-dependent transport system inner membrane component TM0073 PF00528 Binding-protein-dependent transport system inner membrane component TM0074 PF00005 ABC transporter TM0074 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM0075 PF00005 ABC transporter TM0075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM0076 PF00933 Glycosyl hydrolase family 3 N terminal domain TM0076 PF01915 Glycosyl hydrolase family 3 C-terminal domain TM0076 PF14310 Fibronectin type III-like domain TM0077 PF05448 Acetyl xylan esterase (AXE1) TM0078 PF00005 ABC transporter TM0079 PF01032 FecCD transport family TM0080 PF01497 Periplasmic binding protein TM0081 PF02623 FliW protein TM0082 PF00669 Bacterial flagellin N-terminal helical region TM0083 PF00460 Flagella basal body rod protein TM0083 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TM0083 PF07196 Flagellin hook IN motif TM0084 PF05130 FlgN protein TM0085 PF04316 Anti-sigma-28 factor, FlgM TM0086 PF03023 TM0086 TM0087 PF01875 Memo-like protein TM0088 PF00263 TM0088 TM0094 PF00482 Type II secretion system (T2SS), protein F TM0095 PF02915 Rubrerythrin TM0096 PF01207 Dihydrouridine synthase (Dus) TM0097 PF01467 Cytidylyltransferase TM0098 PF01018 GTP1/OBG TM0098 PF01926 50S ribosome-binding GTPase TM0098 PF09269 Domain of unknown function (DUF1967) TM0100 PF00533 BRCA1 C Terminus (BRCT) domain TM0100 PF01653 NAD-dependent DNA ligase adenylation domain TM0100 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TM0100 PF03120 NAD-dependent DNA ligase OB-fold domain TM0100 PF12826 Helix-hairpin-helix motif TM0100 PF14520 Helix-hairpin-helix domain TM0102 PF02608 Basic membrane protein TM0103 PF00005 ABC transporter TM0104 PF02653 TM0104 TM0105 PF02653 TM0105 TM0106 PF13482 RNase_H superfamily TM0106 PF14520 Helix-hairpin-helix domain TM0107 PF00990 GGDEF domain TM0108 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TM0109 PF04055 Radical SAM superfamily TM0109 PF13353 4Fe-4S single cluster domain TM0110 PF00480 ROK family TM0110 PF13412 Winged helix-turn-helix DNA-binding TM0111 PF00465 Iron-containing alcohol dehydrogenase TM0112 PF02653 TM0112 TM0113 PF01522 Polysaccharide deacetylase TM0114 PF13407 Periplasmic binding protein domain TM0115 PF00005 ABC transporter TM0116 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TM0116 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TM0117 PF04055 Radical SAM superfamily TM0118 PF00317 Ribonucleotide reductase, all-alpha domain TM0118 PF02867 Ribonucleotide reductase, barrel domain TM0119 PF03069 Acetamidase/Formamidase family TM0120 PF00881 Nitroreductase family TM0121 PF04055 Radical SAM superfamily TM0122 PF01475 Ferric uptake regulator family TM0123 PF01297 Periplasmic solute binding protein family TM0124 PF00005 ABC transporter TM0125 PF00950 TM0125 TM0126 PF00072 Response regulator receiver domain TM0126 PF00486 Transcriptional regulatory protein, C terminal TM0127 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM0128 PF00682 HMGL-like TM0128 PF02436 Conserved carboxylase domain TM0129 PF01546 Peptidase family M20/M25/M40 TM0129 PF07687 Peptidase dimerisation domain TM0130 PF07690 Major Facilitator Superfamily TM0132 PF00669 Bacterial flagellin N-terminal helical region TM0133 PF00857 Isochorismatase family TM0134 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM0135 PF01385 TM0135 TM0135 PF07282 TM0135 TM0137 PF00290 Tryptophan synthase alpha chain TM0138 PF00291 Pyridoxal-phosphate dependent enzyme TM0139 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TM0140 PF00218 Indole-3-glycerol phosphate synthase TM0141 PF00117 Glutamine amidotransferase class-I TM0141 PF00591 Glycosyl transferase family, a/b domain TM0141 PF02885 Glycosyl transferase family, helical bundle domain TM0142 PF00425 chorismate binding enzyme TM0142 PF04715 Anthranilate synthase component I, N terminal region TM0143 PF00072 Response regulator receiver domain TM0143 PF00990 GGDEF domain TM0144 PF09723 TM0144 TM0145 PF00814 Glycoprotease family TM0146 PF06689 ClpX C4-type zinc finger TM0146 PF07724 AAA domain (Cdc48 subfamily) TM0146 PF10431 C-terminal, D2-small domain, of ClpB protein TM0147 PF02410 Oligomerisation domain TM0148 PF01380 SIS domain TM0148 PF13522 Glutamine amidotransferase domain TM0149 PF02504 Fatty acid synthesis protein TM0150 PF01783 Ribosomal L32p protein family TM0151 PF02620 TM0151 TM0152 PF02589 Uncharacterised ACR, YkgG family COG1556 TM0153 PF16260 TM0153 TM0155 PF00800 Prephenate dehydratase TM0155 PF01817 Chorismate mutase type II TM0155 PF01842 ACT domain TM0156 PF00245 Alkaline phosphatase TM0157 PF01613 Flavin reductase like domain TM0158 PF01790 TM0158 TM0159 PF01725 Ham1 family TM0160 PF02577 Bifunctional nuclease TM0161 PF00348 Polyprenyl synthetase TM0163 PF14559 Tetratricopeptide repeat TM0164 PF04018 TM0164 TM0165 PF01330 RuvA N terminal domain TM0165 PF07499 RuvA, C-terminal domain TM0165 PF14520 Helix-hairpin-helix domain TM0166 PF02875 Mur ligase family, glutamate ligase domain TM0166 PF08245 Mur ligase middle domain TM0167 PF01676 Metalloenzyme superfamily TM0168 PF00133 tRNA synthetases class I (I, L, M and V) TM0168 PF08264 Anticodon-binding domain of tRNA TM0168 PF09334 tRNA synthetases class I (M) TM0168 PF13603 Leucyl-tRNA synthetase, Domain 2 TM0169 PF02629 CoA binding domain TM0169 PF06971 Putative DNA-binding protein N-terminus TM0170 PF16256 TM0170 TM0171 PF13242 HAD-hyrolase-like TM0172 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TM0172 PF05221 S-adenosyl-L-homocysteine hydrolase TM0173 PF00270 DEAD/DEAH box helicase TM0173 PF01131 DNA topoisomerase TM0173 PF01751 Toprim domain TM0174 PF03030 Inorganic H+ pyrophosphatase TM0175 PF00550 Phosphopantetheine attachment site TM0176 PF01937 Protein of unknown function DUF89 TM0177 PF02588 TM0177 TM0177 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TM0178 PF04851 Type III restriction enzyme, res subunit TM0181 PF06144 DNA polymerase III, delta subunit TM0182 PF02310 B12 binding domain TM0182 PF04055 Radical SAM superfamily TM0183 PF00795 Carbon-nitrogen hydrolase TM0184 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TM0184 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TM0184 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TM0184 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TM0185 PF08327 Activator of Hsp90 ATPase homolog 1-like protein TM0186 PF00072 Response regulator receiver domain TM0186 PF01966 HD domain TM0187 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM0188 PF01980 Uncharacterised protein family UPF0066 TM0189 PF01497 Periplasmic binding protein TM0190 PF01032 FecCD transport family TM0191 PF00005 ABC transporter TM0192 PF04232 Stage V sporulation protein S (SpoVS) TM0193 PF03649 TM0193 TM0194 PF00005 ABC transporter TM0195 PF02541 Ppx/GppA phosphatase family TM0196 PF04008 Adenosine specific kinase TM0197 PF01171 PP-loop family TM0198 PF00004 ATPase family associated with various cellular activities (AAA) TM0198 PF02861 Clp amino terminal domain TM0198 PF07724 AAA domain (Cdc48 subfamily) TM0198 PF10431 C-terminal, D2-small domain, of ClpB protein TM0199 PF13481 AAA domain TM0200 PF00633 Helix-hairpin-helix motif TM0200 PF02457 DisA bacterial checkpoint controller nucleotide-binding TM0200 PF10635 DisA bacterial checkpoint controller linker region TM0201 PF02256 Iron hydrogenase small subunit TM0201 PF02906 Iron only hydrogenase large subunit, C-terminal domain TM0201 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TM0201 PF13187 4Fe-4S dicluster domain TM0201 PF13510 2Fe-2S iron-sulfur cluster binding domain TM0202 PF13379 NMT1-like family TM0203 PF00528 Binding-protein-dependent transport system inner membrane component TM0204 PF00005 ABC transporter TM0205 PF00270 DEAD/DEAH box helicase TM0205 PF00271 Helicase conserved C-terminal domain TM0205 PF17190 TM0205 TM0205 PF17191 TM0205 TM0206 PF00156 Phosphoribosyl transferase domain TM0207 PF13483 Beta-lactamase superfamily domain TM0208 PF00224 Pyruvate kinase, barrel domain TM0208 PF02887 Pyruvate kinase, alpha/beta domain TM0209 PF00365 Phosphofructokinase TM0210 PF09413 Domain of unknown function (DUF2007) TM0211 PF01571 Aminomethyltransferase folate-binding domain TM0211 PF08669 Glycine cleavage T-protein C-terminal barrel domain TM0212 PF01597 Glycine cleavage H-protein TM0213 PF02347 Glycine cleavage system P-protein TM0214 PF02347 Glycine cleavage system P-protein TM0215 PF01042 Endoribonuclease L-PSP TM0216 PF02091 Glycyl-tRNA synthetase alpha subunit TM0217 PF02092 TM0217 TM0217 PF05746 DALR anticodon binding domain TM0218 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TM0218 PF02874 ATP synthase alpha/beta family, beta-barrel domain TM0219 PF02108 TM0219 TM0220 PF01706 FliG C-terminal domain TM0220 PF14841 FliG middle domain TM0220 PF14842 FliG N-terminal domain TM0221 PF01514 Secretory protein of YscJ/FliF family TM0221 PF08345 TM0221 TM0222 PF00005 ABC transporter TM0223 PF01479 S4 domain TM0224 PF03099 Biotin/lipoate A/B protein ligase family TM0225 PF00291 Pyridoxal-phosphate dependent enzyme TM0226 PF04474 TM0226 TM0228 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TM0228 PF10531 SLBB domain TM0228 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TM0229 PF03547 TM0229 TM0230 PF12850 Calcineurin-like phosphoesterase superfamily domain TM0231 PF01225 Mur ligase family, catalytic domain TM0231 PF02875 Mur ligase family, glutamate ligase domain TM0231 PF08245 Mur ligase middle domain TM0232 PF03033 Glycosyltransferase family 28 N-terminal domain TM0232 PF04101 Glycosyltransferase family 28 C-terminal domain TM0233 PF01098 TM0233 TM0234 PF08245 Mur ligase middle domain TM0235 PF00953 Glycosyl transferase family 4 TM0235 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TM0236 PF01225 Mur ligase family, catalytic domain TM0236 PF02875 Mur ligase family, glutamate ligase domain TM0236 PF08245 Mur ligase middle domain TM0237 PF01225 Mur ligase family, catalytic domain TM0237 PF02875 Mur ligase family, glutamate ligase domain TM0237 PF08245 Mur ligase middle domain TM0239 PF00483 Nucleotidyl transferase TM0240 PF00132 Bacterial transferase hexapeptide (six repeats) TM0240 PF00483 Nucleotidyl transferase TM0241 PF16240 TM0241 TM0243 PF04055 Radical SAM superfamily TM0244 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TM0244 PF10531 SLBB domain TM0244 PF13237 4Fe-4S dicluster domain TM0244 PF13375 RnfC Barrel sandwich hybrid domain TM0245 PF03116 TM0245 TM0246 PF04205 FMN-binding domain TM0247 PF02508 TM0247 TM0248 PF02508 TM0248 TM0249 PF04060 Putative Fe-S cluster TM0250 PF02481 DNA recombination-mediator protein A TM0251 PF02599 Global regulator protein family TM0252 PF02686 Glu-tRNAGln amidotransferase C subunit TM0253 PF02021 Uncharacterised protein family UPF0102 TM0255 PF00830 Ribosomal L28 family TM0258 PF01131 DNA topoisomerase TM0258 PF01751 Toprim domain TM0259 PF01820 D-ala D-ala ligase N-terminus TM0259 PF07478 D-ala D-ala ligase C-terminus TM0260 PF01865 Protein of unknown function DUF47 TM0261 PF01384 TM0261 TM0262 PF00712 DNA polymerase III beta subunit, N-terminal domain TM0262 PF02767 DNA polymerase III beta subunit, central domain TM0262 PF02768 DNA polymerase III beta subunit, C-terminal domain TM0263 PF01134 Glucose inhibited division protein A TM0263 PF13932 GidA associated domain 3 TM0264 PF00849 RNA pseudouridylate synthase TM0264 PF01479 S4 domain TM0265 PF01541 GIY-YIG catalytic domain TM0265 PF02151 UvrB/uvrC motif TM0265 PF08459 UvrC Helix-hairpin-helix N-terminal TM0266 PF00216 Bacterial DNA-binding protein TM0267 PF01926 50S ribosome-binding GTPase TM0267 PF10396 GTP-binding protein TrmE N-terminus TM0267 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE TM0268 PF00809 Pterin binding enzyme TM0268 PF02310 B12 binding domain TM0268 PF02574 Homocysteine S-methyltransferase TM0268 PF02607 B12 binding domain TM0270 PF02219 Methylenetetrahydrofolate reductase TM0272 PF00391 PEP-utilising enzyme, mobile domain TM0272 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TM0272 PF02896 PEP-utilising enzyme, TIM barrel domain TM0273 PF01116 Fructose-bisphosphate aldolase class-II TM0274 PF00871 Acetokinase family TM0275 PF00392 Bacterial regulatory proteins, gntR family TM0275 PF13377 Periplasmic binding protein-like domain TM0276 PF02610 L-arabinose isomerase TM0276 PF11762 L-arabinose isomerase C-terminal domain TM0278 PF00528 Binding-protein-dependent transport system inner membrane component TM0279 PF00528 Binding-protein-dependent transport system inner membrane component TM0280 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) TM0281 PF06964 Alpha-L-arabinofuranosidase C-terminus TM0282 PF01263 Aldose 1-epimerase TM0283 PF00596 Class II Aldolase and Adducin N-terminal domain TM0284 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TM0284 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TM0285 PF13685 Iron-containing alcohol dehydrogenase TM0286 PF03551 Transcriptional regulator PadR-like family TM0287 PF00005 ABC transporter TM0287 PF00664 ABC transporter transmembrane region TM0288 PF00005 ABC transporter TM0288 PF00664 ABC transporter transmembrane region TM0289 PF00365 Phosphofructokinase TM0290 PF00285 Citrate synthase TM0291 PF00330 Aconitase family (aconitate hydratase) TM0292 PF00694 Aconitase C-terminal domain TM0293 PF00171 Aldehyde dehydrogenase family TM0294 PF00696 Amino acid kinase family TM0294 PF01472 PUA domain TM0295 PF00923 Transaldolase TM0296 PF00294 pfkB family carbohydrate kinase TM0297 PF13561 Enoyl-(Acyl carrier protein) reductase TM0298 PF08240 Alcohol dehydrogenase GroES-like domain TM0299 PF00356 Bacterial regulatory proteins, lacI family TM0299 PF13377 Periplasmic binding protein-like domain TM0300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM0301 PF00528 Binding-protein-dependent transport system inner membrane component TM0302 PF00528 Binding-protein-dependent transport system inner membrane component TM0303 PF00005 ABC transporter TM0303 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM0304 PF00005 ABC transporter TM0304 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM0305 PF15899 TM0305 TM0306 PF01120 Alpha-L-fucosidase TM0307 PF02952 L-fucose isomerase, C-terminal domain TM0307 PF07881 L-fucose isomerase, first N-terminal domain TM0307 PF07882 L-fucose isomerase, second N-terminal domain TM0308 PF01055 Glycosyl hydrolases family 31 TM0308 PF13802 Galactose mutarotase-like TM0309 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM0310 PF02449 Beta-galactosidase TM0310 PF08532 Beta-galactosidase trimerisation domain TM0310 PF08533 Beta-galactosidase C-terminal domain TM0312 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TM0312 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TM0313 PF00248 Aldo/keto reductase family TM0314 PF04945 YHS domain TM0315 PF09851 TM0315 TM0316 PF02627 Carboxymuconolactone decarboxylase family TM0317 PF00122 E1-E2 ATPase TM0317 PF00403 Heavy-metal-associated domain TM0317 PF00702 haloacid dehalogenase-like hydrolase TM0318 PF08241 Methyltransferase domain TM0319 PF04405 TM0319 TM0320 PF00403 Heavy-metal-associated domain TM0322 PF03480 Bacterial extracellular solute-binding protein, family 7 TM0324 PF06808 TM0324 TM0325 PF13561 Enoyl-(Acyl carrier protein) reductase TM0326 PF01380 SIS domain TM0326 PF01418 Helix-turn-helix domain, rpiR family TM0327 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TM0327 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TM0328 PF01555 DNA methylase TM0330 PF07969 Amidohydrolase family TM0331 PF00156 Phosphoribosyl transferase domain TM0332 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TM0333 PF01180 Dihydroorotate dehydrogenase TM0334 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TM0336 PF12146 Putative lysophospholipase TM0336 PF13026 Protein of unknown function (DUF3887) TM0337 PF04055 Radical SAM superfamily TM0337 PF08497 TM0337 TM0337 PF11842 TM0337 TM0339 PF09862 TM0339 TM0342 PF07690 Major Facilitator Superfamily TM0343 PF00793 DAHP synthetase I family TM0344 PF02153 Prephenate dehydrogenase TM0345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TM0346 PF01488 Shikimate / quinate 5-dehydrogenase TM0346 PF08501 Shikimate dehydrogenase substrate binding domain TM0347 PF01264 Chorismate synthase TM0348 PF01202 Shikimate kinase TM0348 PF01761 3-dehydroquinate synthase TM0349 PF01220 Dehydroquinase class II TM0350 PF01810 TM0350 TM0351 PF02687 TM0351 TM0351 PF12704 MacB-like periplasmic core domain TM0352 PF00005 ABC transporter TM0353 PF13437 HlyD family secretion protein TM0353 PF13533 Biotin-lipoyl like TM0354 PF02321 Outer membrane efflux protein TM0355 PF02321 Outer membrane efflux protein TM0356 PF00291 Pyridoxal-phosphate dependent enzyme TM0356 PF01842 ACT domain TM0358 PF00781 Diacylglycerol kinase catalytic domain TM0359 PF13439 Glycosyltransferase Family 4 TM0360 PF03819 MazG nucleotide pyrophosphohydrolase domain TM0362 PF01261 Xylose isomerase-like TIM barrel TM0363 PF05670 TM0363 TM0363 PF05833 Fibronectin-binding protein A N-terminus (FbpA) TM0364 PF00128 Alpha amylase, catalytic domain TM0364 PF09178 Domain of unknown function (DUF1945) TM0365 PF02127 Aminopeptidase I zinc metalloprotease (M18) TM0366 PF00633 Helix-hairpin-helix motif TM0366 PF00730 HhH-GPD superfamily base excision DNA repair protein TM0366 PF10576 Iron-sulfur binding domain of endonuclease III TM0367 PF01987 Mitochondrial biogenesis AIM24 TM0368 PF07690 Major Facilitator Superfamily TM0370 PF06745 KaiC TM0371 PF01316 Arginine repressor, DNA binding domain TM0371 PF02863 Arginine repressor, C-terminal domain TM0372 PF00873 AcrB/AcrD/AcrF family TM0373 PF00012 Hsp70 protein TM0374 PF00011 Hsp20/alpha crystallin family TM0375 PF06130 TM0375 TM0376 PF01925 TM0376 TM0379 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TM0379 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM0381 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TM0381 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM0382 PF00730 HhH-GPD superfamily base excision DNA repair protein TM0383 PF00881 Nitroreductase family TM0384 PF13353 4Fe-4S single cluster domain TM0385 PF13597 Anaerobic ribonucleoside-triphosphate reductase TM0386 PF00578 AhpC/TSA family TM0386 PF00881 Nitroreductase family TM0387 PF01061 TM0387 TM0388 PF12698 ABC-2 family transporter protein TM0389 PF00005 ABC transporter TM0392 PF00534 Glycosyl transferases group 1 TM0393 PF00480 ROK family TM0393 PF13412 Winged helix-turn-helix DNA-binding TM0394 PF01493 GXGXG motif TM0395 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM0396 PF13247 4Fe-4S dicluster domain TM0397 PF01645 Conserved region in glutamate synthase TM0397 PF12838 4Fe-4S dicluster domain TM0398 PF00310 Glutamine amidotransferases class-II TM0399 PF00072 Response regulator receiver domain TM0399 PF00486 Transcriptional regulatory protein, C terminal TM0400 PF00512 His Kinase A (phospho-acceptor) domain TM0400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM0401 PF00265 Thymidine kinase TM0402 PF00909 Ammonium Transporter Family TM0403 PF00543 Nitrogen regulatory protein P-II TM0404 PF14437 TM0404 TM0405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TM0406 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TM0407 PF01219 Prokaryotic diacylglycerol kinase TM0408 PF00072 Response regulator receiver domain TM0408 PF01339 CheB methylesterase TM0409 PF01476 LysM domain TM0409 PF01551 Peptidase family M23 TM0410 PF04463 TM0410 TM0411 PF00480 ROK family TM0411 PF13412 Winged helix-turn-helix DNA-binding TM0412 PF00107 Zinc-binding dehydrogenase TM0412 PF08240 Alcohol dehydrogenase GroES-like domain TM0413 PF02633 Creatinine amidohydrolase TM0414 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TM0414 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TM0415 PF00294 pfkB family carbohydrate kinase TM0416 PF01261 Xylose isomerase-like TIM barrel TM0417 PF03239 TM0417 TM0418 PF01547 Bacterial extracellular solute-binding protein TM0419 PF00528 Binding-protein-dependent transport system inner membrane component TM0420 PF00528 Binding-protein-dependent transport system inner membrane component TM0421 PF00005 ABC transporter TM0421 PF08402 TOBE domain TM0422 PF01261 Xylose isomerase-like TIM barrel TM0423 PF00465 Iron-containing alcohol dehydrogenase TM0424 PF03547 TM0424 TM0425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TM0425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TM0426 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TM0427 PF00890 FAD binding domain TM0428 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TM0429 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM0429 PF00672 HAMP domain TM0429 PF02743 Cache domain TM0430 PF00528 Binding-protein-dependent transport system inner membrane component TM0431 PF00528 Binding-protein-dependent transport system inner membrane component TM0432 PF01547 Bacterial extracellular solute-binding protein TM0433 PF00544 Pectate lyase TM0434 PF02056 Family 4 glycosyl hydrolase TM0434 PF11975 Family 4 glycosyl hydrolase C-terminal domain TM0435 PF05448 Acetyl xylan esterase (AXE1) TM0436 PF00107 Zinc-binding dehydrogenase TM0436 PF08240 Alcohol dehydrogenase GroES-like domain TM0437 PF00295 Glycosyl hydrolases family 28 TM0437 PF12708 Pectate lyase superfamily protein TM0438 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TM0438 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TM0439 PF00392 Bacterial regulatory proteins, gntR family TM0439 PF07729 FCD domain TM0440 PF16257 TM0440 TM0441 PF13561 Enoyl-(Acyl carrier protein) reductase TM0442 PF09861 Domain of unknown function (DUF2088) TM0443 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TM0443 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TM0444 PF00206 Lyase TM0445 PF01926 50S ribosome-binding GTPase TM0446 PF00731 AIR carboxylase TM0447 PF02222 ATP-grasp domain TM0448 PF01103 Surface antigen TM0448 PF07244 Surface antigen variable number repeat TM0449 PF02511 Thymidylate synthase complementing protein TM0451 PF00471 Ribosomal protein L33 TM0452 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TM0453 PF00467 KOW motif TM0453 PF02357 Transcription termination factor nusG TM0454 PF00298 Ribosomal protein L11, RNA binding domain TM0454 PF03946 Ribosomal protein L11, N-terminal domain TM0455 PF00687 Ribosomal protein L1p/L10e family TM0456 PF00466 Ribosomal protein L10 TM0457 PF00542 Ribosomal protein L7/L12 C-terminal domain TM0457 PF16320 TM0457 TM0458 PF00562 RNA polymerase Rpb2, domain 6 TM0458 PF04560 RNA polymerase Rpb2, domain 7 TM0458 PF04563 RNA polymerase beta subunit TM0458 PF04565 RNA polymerase Rpb2, domain 3 TM0458 PF10385 RNA polymerase beta subunit external 1 domain TM0459 PF00623 RNA polymerase Rpb1, domain 2 TM0459 PF04983 RNA polymerase Rpb1, domain 3 TM0459 PF04997 RNA polymerase Rpb1, domain 1 TM0459 PF04998 RNA polymerase Rpb1, domain 5 TM0459 PF05000 RNA polymerase Rpb1, domain 4 TM0460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM0461 PF07733 Bacterial DNA polymerase III alpha subunit TM0461 PF14579 Helix-hairpin-helix motif TM0462 PF00849 RNA pseudouridylate synthase TM0462 PF01479 S4 domain TM0463 PF01252 TM0463 TM0464 PF01739 CheR methyltransferase, SAM binding domain TM0464 PF03705 CheR methyltransferase, all-alpha domain TM0466 PF01709 Transcriptional regulator TM0467 PF07228 Stage II sporulation protein E (SpoIIE) TM0468 PF00072 Response regulator receiver domain TM0469 PF10105 TM0469 TM0470 PF03706 TM0470 TM0472 PF01174 SNO glutamine amidotransferase family TM0473 PF01680 SOR/SNZ family TM0475 PF00857 Isochorismatase family TM0477 PF00395 S-layer homology domain TM0478 PF00579 tRNA synthetases class I (W and Y) TM0478 PF01479 S4 domain TM0480 PF00005 ABC transporter TM0481 PF04165 TM0481 TM0482 PF01869 BadF/BadG/BcrA/BcrD ATPase family TM0482 PF09989 TM0482 TM0483 PF00005 ABC transporter TM0484 PF09084 NMT1/THI5 like TM0485 PF00528 Binding-protein-dependent transport system inner membrane component TM0486 PF01910 Domain of unknown function DUF77 TM0487 PF01883 Domain of unknown function DUF59 TM0488 PF05175 Methyltransferase small domain TM0490 PF02146 Sir2 family TM0491 PF16238 TM0491 TM0492 PF00579 tRNA synthetases class I (W and Y) TM0493 PF02616 ScpA/B protein TM0494 PF04079 Putative transcriptional regulators (Ypuh-like) TM0495 PF02562 PhoH-like protein TM0495 PF13638 PIN domain TM0496 PF00929 Exonuclease TM0497 PF01988 TM0497 TM0498 PF00005 ABC transporter TM0498 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM0500 PF00005 ABC transporter TM0500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM0501 PF00005 ABC transporter TM0501 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM0502 PF00528 Binding-protein-dependent transport system inner membrane component TM0502 PF12911 TM0502 TM0503 PF00528 Binding-protein-dependent transport system inner membrane component TM0505 PF00166 Chaperonin 10 Kd subunit TM0506 PF00118 TCP-1/cpn60 chaperonin family TM0508 PF01661 Macro domain TM0508 PF05496 Holliday junction DNA helicase ruvB N-terminus TM0508 PF12002 MgsA AAA+ ATPase C terminal TM0508 PF16193 TM0508 TM0509 PF01370 NAD dependent epimerase/dehydratase family TM0510 PF01325 Iron dependent repressor, N-terminal DNA binding domain TM0510 PF02742 Iron dependent repressor, metal binding and dimerisation domain TM0511 PF03167 Uracil DNA glycosylase superfamily TM0512 PF02050 Flagellar FliJ protein TM0513 PF01078 Magnesium chelatase, subunit ChlI TM0513 PF13335 TM0513 TM0513 PF13541 Subunit ChlI of Mg-chelatase TM0514 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TM0514 PF03129 Anticodon binding domain TM0514 PF04073 Aminoacyl-tRNA editing domain TM0515 PF04055 Radical SAM superfamily TM0515 PF16199 TM0515 TM0516 PF03415 Clostripain family TM0519 PF01590 GAF domain TM0520 PF03054 tRNA methyl transferase TM0521 PF00227 Proteasome subunit TM0522 PF00004 ATPase family associated with various cellular activities (AAA) TM0522 PF07724 AAA domain (Cdc48 subfamily) TM0522 PF10431 C-terminal, D2-small domain, of ClpB protein TM0524 PF04445 Putative SAM-dependent methyltransferase TM0525 PF01715 IPP transferase TM0527 PF01926 50S ribosome-binding GTPase TM0527 PF13167 TM0527 TM0527 PF16360 TM0527 TM0528 PF00551 Formyl transferase TM0528 PF02911 Formyl transferase, C-terminal domain TM0529 PF00403 Heavy-metal-associated domain TM0530 PF00005 ABC transporter TM0530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM0531 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM0532 PF00528 Binding-protein-dependent transport system inner membrane component TM0533 PF00528 Binding-protein-dependent transport system inner membrane component TM0533 PF12911 TM0533 TM0534 PF04542 Sigma-70 region 2 TM0534 PF08281 Sigma-70, region 4 TM0537 PF13476 AAA domain TM0538 PF01545 Cation efflux family TM0538 PF16916 TM0538 TM0539 PF00291 Pyridoxal-phosphate dependent enzyme TM0540 PF05681 TM0540 TM0541 PF05683 Fumarase C-terminus TM0542 PF00390 Malic enzyme, N-terminal domain TM0542 PF03949 Malic enzyme, NAD binding domain TM0543 PF12698 ABC-2 family transporter protein TM0544 PF00005 ABC transporter TM0545 PF00288 GHMP kinases N terminal domain TM0546 PF00291 Pyridoxal-phosphate dependent enzyme TM0547 PF00696 Amino acid kinase family TM0547 PF00742 Homoserine dehydrogenase TM0547 PF01842 ACT domain TM0547 PF03447 Homoserine dehydrogenase, NAD binding domain TM0547 PF13840 ACT domain TM0548 PF00205 Thiamine pyrophosphate enzyme, central domain TM0548 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TM0548 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TM0549 PF01842 ACT domain TM0549 PF10369 Small subunit of acetolactate synthase TM0550 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TM0550 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain TM0551 PF00920 Dehydratase family TM0552 PF00682 HMGL-like TM0552 PF08502 LeuA allosteric (dimerisation) domain TM0553 PF00682 HMGL-like TM0553 PF08502 LeuA allosteric (dimerisation) domain TM0554 PF00330 Aconitase family (aconitate hydratase) TM0555 PF00694 Aconitase C-terminal domain TM0556 PF00180 Isocitrate/isopropylmalate dehydrogenase TM0557 PF02142 MGS-like domain TM0557 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TM0557 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TM0558 PF00117 Glutamine amidotransferase class-I TM0558 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TM0560 PF00210 Ferritin-like domain TM0561 PF01544 CorA-like Mg2+ transporter protein TM0563 PF07690 Major Facilitator Superfamily TM0564 PF01613 Flavin reductase like domain TM0565 PF03749 Sugar fermentation stimulation protein TM0567 PF02082 Transcriptional regulator TM0568 PF01476 LysM domain TM0568 PF01551 Peptidase family M23 TM0568 PF06725 3D domain TM0569 PF09986 TM0569 TM0570 PF00448 SRP54-type protein, GTPase domain TM0570 PF02881 SRP54-type protein, helical bundle domain TM0571 PF13180 PDZ domain TM0571 PF13365 Trypsin-like peptidase domain TM0572 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TM0573 PF00795 Carbon-nitrogen hydrolase TM0574 PF02547 Queuosine biosynthesis protein TM0575 PF02075 Crossover junction endodeoxyribonuclease RuvC TM0576 PF00929 Exonuclease TM0576 PF02811 PHP domain TM0576 PF07733 Bacterial DNA polymerase III alpha subunit TM0576 PF14579 Helix-hairpin-helix motif TM0577 PF00583 Acetyltransferase (GNAT) family TM0578 PF03807 NADP oxidoreductase coenzyme F420-dependent TM0578 PF14748 Pyrroline-5-carboxylate reductase dimerisation TM0579 PF01171 PP-loop family TM0579 PF11734 TilS substrate C-terminal domain TM0580 PF00004 ATPase family associated with various cellular activities (AAA) TM0580 PF01434 Peptidase family M41 TM0580 PF06480 FtsH Extracellular TM0582 PF04055 Radical SAM superfamily TM0583 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TM0583 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TM0583 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TM0584 PF01694 Rhomboid family TM0585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TM0585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TM0586 PF00892 EamA-like transporter family TM0587 PF00571 CBS domain TM0587 PF01368 DHH family TM0587 PF02833 DHHA2 domain TM0587 PF07085 DRTGG domain TM0588 PF06723 MreB/Mbl protein TM0590 PF00905 Penicillin binding protein transpeptidase domain TM0590 PF03717 Penicillin-binding Protein dimerisation domain TM0591 PF00005 ABC transporter TM0592 PF00528 Binding-protein-dependent transport system inner membrane component TM0593 PF00497 Bacterial extracellular solute-binding proteins, family 3 TM0594 PF00860 Permease family TM0595 PF13416 Bacterial extracellular solute-binding protein TM0596 PF00528 Binding-protein-dependent transport system inner membrane component TM0598 PF00528 Binding-protein-dependent transport system inner membrane component TM0602 PF02742 Iron dependent repressor, metal binding and dimerisation domain TM0603 PF01250 Ribosomal protein S6 TM0604 PF00436 Single-strand binding protein family TM0605 PF01084 Ribosomal protein S18 TM0607 PF00753 Metallo-beta-lactamase superfamily TM0608 PF02592 TM0608 TM0609 PF13439 Glycosyltransferase Family 4 TM0610 PF02350 UDP-N-acetylglucosamine 2-epimerase TM0612 PF00400 WD domain, G-beta repeat TM0613 PF05168 HEPN domain TM0614 PF01909 Nucleotidyltransferase domain TM0615 PF13401 AAA domain TM0616 PF13173 AAA domain TM0618 PF13086 AAA domain TM0618 PF13087 AAA domain TM0618 PF13195 TM0618 TM0618 PF13245 Part of AAA domain TM0619 PF13439 Glycosyltransferase Family 4 TM0619 PF13692 Glycosyl transferases group 1 TM0620 PF01943 TM0620 TM0620 PF14667 Polysaccharide biosynthesis C-terminal domain TM0622 PF00534 Glycosyl transferases group 1 TM0622 PF13439 Glycosyltransferase Family 4 TM0624 PF13692 Glycosyl transferases group 1 TM0626 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase TM0627 PF00534 Glycosyl transferases group 1 TM0627 PF13439 Glycosyltransferase Family 4 TM0628 PF00534 Glycosyl transferases group 1 TM0630 PF01370 NAD dependent epimerase/dehydratase family TM0631 PF00534 Glycosyl transferases group 1 TM0631 PF13439 Glycosyltransferase Family 4 TM0632 PF02397 TM0632 TM0633 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TM0634 PF04542 Sigma-70 region 2 TM0636 PF11148 TM0636 TM0637 PF07872 TM0637 TM0638 PF02563 Polysaccharide biosynthesis/export protein TM0638 PF10531 SLBB domain TM0640 PF13419 Haloacid dehalogenase-like hydrolase TM0643 PF03415 Clostripain family TM0644 PF02706 Chain length determinant protein TM0644 PF13807 TM0644 TM0645 PF02540 NAD synthase TM0646 PF10107 TM0646 TM0647 PF02542 YgbB family TM0648 PF01909 Nucleotidyltransferase domain TM0651 PF08282 haloacid dehalogenase-like hydrolase TM0652 PF13091 PLD-like domain TM0653 PF00919 Uncharacterized protein family UPF0004 TM0653 PF01938 TRAM domain TM0653 PF04055 Radical SAM superfamily TM0654 PF01564 Spermine/spermidine synthase TM0655 PF02675 S-adenosylmethionine decarboxylase TM0656 PF01381 Helix-turn-helix TM0656 PF07883 Cupin domain TM0657 PF02915 Rubrerythrin TM0658 PF01880 Desulfoferrodoxin TM0659 PF00301 Rubredoxin TM0660 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase TM0662 PF00550 Phosphopantetheine attachment site TM0664 PF01986 TM0664 TM0665 PF00291 Pyridoxal-phosphate dependent enzyme TM0666 PF00132 Bacterial transferase hexapeptide (six repeats) TM0667 PF01026 TatD related DNase TM0668 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TM0672 PF02120 Flagellar hook-length control protein FliK TM0673 PF03963 TM0673 TM0673 PF13860 FlgD Ig-like domain TM0675 PF06289 TM0675 TM0676 PF01618 TM0676 TM0677 PF00691 OmpA family TM0677 PF13677 TM0677 TM0678 PF03748 TM0678 TM0679 PF01052 Surface presentation of antigens (SPOA) TM0679 PF02154 Flagellar motor switch protein FliM TM0680 PF04509 CheC-like family TM0680a PF01052 Surface presentation of antigens (SPOA) TM0681 PF00753 Metallo-beta-lactamase superfamily TM0682 PF04230 TM0682 TM0685 PF01464 Transglycosylase SLT domain TM0686 PF13177 DNA polymerase III, delta subunit TM0687 PF02575 YbaB/EbfC DNA-binding family TM0688 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TM0688 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TM0689 PF00121 Triosephosphate isomerase TM0689 PF00162 Phosphoglycerate kinase TM0690 PF09424 Yqey-like protein TM0691 PF13649 Methyltransferase domain TM0692 PF01648 4'-phosphopantetheinyl transferase superfamily TM0694 PF05697 Bacterial trigger factor protein (TF) TM0694 PF05698 Bacterial trigger factor protein (TF) C-terminus TM0695 PF00574 Clp protease TM0696 PF04366 TM0696 TM0697 PF01313 TM0697 TM0698 PF00813 TM0698 TM0699 PF04347 TM0699 TM0700 PF00072 Response regulator receiver domain TM0701 PF01584 CheW-like domain TM0702 PF01584 CheW-like domain TM0702 PF01627 Hpt domain TM0702 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM0702 PF02895 Signal transducing histidine kinase, homodimeric domain TM0702 PF07194 P2 response regulator binding domain TM0703 PF00994 Probable molybdopterin binding domain TM0703 PF02464 Competence-damaged protein TM0704 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TM0705 PF00005 ABC transporter TM0706 PF02687 TM0706 TM0706 PF12704 MacB-like periplasmic core domain TM0707 PF02527 rRNA small subunit methyltransferase G TM0708 PF03099 Biotin/lipoate A/B protein ligase family TM0709 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TM0710 PF01047 MarR family TM0711 PF00395 S-layer homology domain TM0712 PF01734 Patatin-like phospholipase TM0714 PF06835 Lipopolysaccharide-assembly, LptC-related TM0715 PF00571 CBS domain TM0715 PF01368 DHH family TM0715 PF01743 Poly A polymerase head domain TM0715 PF02272 DHHA1 domain TM0715 PF12627 Probable RNA and SrmB- binding site of polymerase A TM0716 PF01039 Carboxyl transferase domain TM0717 PF00364 Biotin-requiring enzyme TM0718 PF01584 CheW-like domain TM0719 PF01406 tRNA synthetases class I (C) catalytic domain TM0719 PF09190 DALR domain TM0720 PF00464 Serine hydroxymethyltransferase TM0721 PF14681 Uracil phosphoribosyltransferase TM0722 PF00575 S1 RNA binding domain TM0722 PF00773 RNB domain TM0722 PF08206 Ribonuclease B OB domain TM0723 PF01894 Uncharacterised protein family UPF0047 TM0724 PF01699 Sodium/calcium exchanger protein TM0725 PF08308 TM0725 TM0725 PF13860 FlgD Ig-like domain TM0726 PF01523 Putative modulator of DNA gyrase TM0727 PF01523 Putative modulator of DNA gyrase TM0728 PF00892 EamA-like transporter family TM0729 PF02824 TGS domain TM0729 PF04607 Region found in RelA / SpoT proteins TM0729 PF13291 ACT domain TM0729 PF13328 HD domain TM0730 PF02580 D-Tyr-tRNA(Tyr) deacylase TM0731 PF02677 TM0731 TM0732 PF16298 TM0732 TM0733 PF13581 Histidine kinase-like ATPase domain TM0734 PF01134 Glucose inhibited division protein A TM0735 PF03961 TM0735 TM0736 PF01238 Phosphomannose isomerase type I TM0737 PF00149 Calcineurin-like phosphoesterase TM0739 PF01966 HD domain TM0740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TM0740 PF02824 TGS domain TM0740 PF03129 Anticodon binding domain TM0740 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TM0741 PF01467 Cytidylyltransferase TM0742 PF00149 Calcineurin-like phosphoesterase TM0744 PF00534 Glycosyl transferases group 1 TM0744 PF13439 Glycosyltransferase Family 4 TM0747 PF03572 Peptidase family S41 TM0747 PF13180 PDZ domain TM0748 PF08704 tRNA methyltransferase complex GCD14 subunit TM0749 PF10646 TM0749 TM0750 PF16299 TM0750 TM0751 PF00485 Phosphoribulokinase / Uridine kinase family TM0752 PF02056 Family 4 glycosyl hydrolase TM0752 PF11975 Family 4 glycosyl hydrolase C-terminal domain TM0753 PF01209 ubiE/COQ5 methyltransferase family TM0754 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM0755 PF00258 Flavodoxin TM0756 PF00534 Glycosyl transferases group 1 TM0756 PF00535 Glycosyl transferase family 2 TM0756 PF07719 Tetratricopeptide repeat TM0756 PF13847 Methyltransferase domain TM0757 PF00535 Glycosyl transferase family 2 TM0757 PF07719 Tetratricopeptide repeat TM0758 PF00669 Bacterial flagellin N-terminal helical region TM0758 PF00700 Bacterial flagellin C-terminal helical region TM0759 PF00132 Bacterial transferase hexapeptide (six repeats) TM0760 PF00534 Glycosyl transferases group 1 TM0760 PF13439 Glycosyltransferase Family 4 TM0761 PF07690 Major Facilitator Superfamily TM0762 PF00318 Ribosomal protein S2 TM0763 PF01906 Putative heavy-metal-binding TM0764 PF12679 TM0764 TM0765 PF00005 ABC transporter TM0766 PF00392 Bacterial regulatory proteins, gntR family TM0767 PF00128 Alpha amylase, catalytic domain TM0767 PF09083 Domain of unknown function (DUF1923) TM0768 PF01926 50S ribosome-binding GTPase TM0769 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TM0769 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TM0769 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TM0769 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TM0770 PF04055 Radical SAM superfamily TM0771 PF13177 DNA polymerase III, delta subunit TM0772 PF04468 TM0772 TM0773 PF11146 TM0773 TM0774 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TM0775 PF00009 Elongation factor Tu GTP binding domain TM0775 PF04760 Translation initiation factor IF-2, N-terminal region TM0775 PF11987 Translation-initiation factor 2 TM0776 PF01385 TM0776 TM0776 PF07282 TM0776 TM0777 PF01797 Transposase IS200 like TM0779 PF01927 TM0779 TM0779 PF14451 TM0779 TM0780 PF00578 AhpC/TSA family TM0782 PF04041 Domain of unknown function (DUF377) TM0785 PF04454 Encapsulating protein for peroxidase TM0787 PF01946 Thi4 family TM0788 PF01964 ThiC family TM0789 PF01261 Xylose isomerase-like TIM barrel TM0790 PF08543 Phosphomethylpyrimidine kinase TM0790 PF10120 Putative aldolase TM0791 PF14489 QueF-like protein TM0792 PF02592 TM0792 TM0793 PF00005 ABC transporter TM0795 PF00294 pfkB family carbohydrate kinase TM0796 PF07755 Protein of unknown function (DUF1611) TM0797 PF04029 2-phosphosulpholactate phosphatase TM0798 PF00698 Acyl transferase domain TM0799 PF02632 BioY family TM0800 PF03060 Nitronate monooxygenase TM0801 PF07977 FabA-like domain TM0802 PF00109 Beta-ketoacyl synthase, N-terminal domain TM0802 PF02801 Beta-ketoacyl synthase, C-terminal domain TM0803 PF00117 Glutamine amidotransferase class-I TM0803 PF06418 CTP synthase N-terminus TM0804 PF02811 PHP domain TM0805 PF00953 Glycosyl transferase family 4 TM0806 PF04932 TM0806 TM0807 PF00578 AhpC/TSA family TM0807 PF10417 C-terminal domain of 1-Cys peroxiredoxin TM0808 PF00480 ROK family TM0808 PF13412 Winged helix-turn-helix DNA-binding TM0809 PF00933 Glycosyl hydrolase family 3 N terminal domain TM0810 PF01547 Bacterial extracellular solute-binding protein TM0811 PF00528 Binding-protein-dependent transport system inner membrane component TM0812 PF00528 Binding-protein-dependent transport system inner membrane component TM0813 PF01380 SIS domain TM0814 PF01979 Amidohydrolase family TM0815 PF01554 MatE TM0816 PF01047 MarR family TM0817 PF03176 MMPL family TM0818 PF03808 TM0818 TM0819 PF00860 Permease family TM0820 PF00465 Iron-containing alcohol dehydrogenase TM0821 PF01409 tRNA synthetases class II core domain (F) TM0821 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TM0822 PF01588 Putative tRNA binding domain TM0822 PF03147 Ferredoxin-fold anticodon binding domain TM0822 PF03483 B3/4 domain TM0822 PF03484 tRNA synthetase B5 domain TM0823 PF00440 Bacterial regulatory proteins, tetR family TM0824 PF04055 Radical SAM superfamily TM0824 PF13186 Iron-sulfur cluster-binding domain TM0824 PF13353 4Fe-4S single cluster domain TM0825 PF04055 Radical SAM superfamily TM0825 PF13186 Iron-sulfur cluster-binding domain TM0825 PF13394 4Fe-4S single cluster domain TM0827 PF00005 ABC transporter TM0828 PF00294 pfkB family carbohydrate kinase TM0829 PF00571 CBS domain TM0830 PF00919 Uncharacterized protein family UPF0004 TM0830 PF04055 Radical SAM superfamily TM0831 PF01063 Aminotransferase class IV TM0832 PF05258 TM0832 TM0833 PF00204 DNA gyrase B TM0833 PF00986 DNA gyrase B subunit, carboxyl terminus TM0833 PF01751 Toprim domain TM0833 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM0834 PF16235 TM0834 TM0835 PF02491 SHS2 domain inserted in FTSA TM0835 PF14450 Cell division protein FtsA TM0836 PF00091 Tubulin/FtsZ family, GTPase domain TM0836 PF12327 FtsZ family, C-terminal domain TM0837 PF00437 Type II/IV secretion system protein TM0837 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TM0839 PF01098 TM0839 TM0841 PF08308 TM0841 TM0841 PF14326 TM0841 TM0842 PF00072 Response regulator receiver domain TM0843 PF02971 Formiminotransferase domain TM0843 PF07837 Formiminotransferase domain, N-terminal subdomain TM0844 PF02590 Predicted SPOUT methyltransferase TM0845 PF00571 CBS domain TM0845 PF01595 TM0845 TM0845 PF03471 Transporter associated domain TM0846 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TM0847 PF01926 50S ribosome-binding GTPase TM0847 PF07650 KH domain TM0848 PF01926 50S ribosome-binding GTPase TM0849 PF00226 DnaJ domain TM0849 PF00684 DnaJ central domain TM0849 PF01556 DnaJ C terminal domain TM0850 PF01025 GrpE TM0851 PF01628 HrcA protein C terminal domain TM0852 PF01300 Telomere recombination TM0852 PF03481 Putative GTP-binding controlling metal-binding TM0853 PF00512 His Kinase A (phospho-acceptor) domain TM0853 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM0854 PF08668 HDOD domain TM0855 PF02033 Ribosome-binding factor A TM0856 PF01472 PUA domain TM0856 PF01509 TruB family pseudouridylate synthase (N terminal domain) TM0856 PF16198 TM0856 TM0857 PF01687 Riboflavin kinase TM0857 PF06574 FAD synthetase TM0858 PF12822 Protein of unknown function (DUF3816) TM0859 PF02699 Preprotein translocase subunit TM0860 PF02355 Protein export membrane protein TM0861 PF02355 Protein export membrane protein TM0861 PF07549 SecD/SecF GG Motif TM0862 PF00132 Bacterial transferase hexapeptide (six repeats) TM0862 PF00483 Nucleotidyl transferase TM0863 PF01281 Ribosomal protein L9, N-terminal domain TM0863 PF03948 Ribosomal protein L9, C-terminal domain TM0864 PF12706 Beta-lactamase superfamily domain TM0865 PF01957 NfeD-like C-terminal, partner-binding TM0866 PF01145 SPFH domain / Band 7 family TM0868 PF13192 Thioredoxin domain TM0869 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM0870 PF00905 Penicillin binding protein transpeptidase domain TM0870 PF03793 PASTA domain TM0872 PF01795 MraW methylase family TM0874 PF00814 Glycoprotease family TM0875 PF12967 Domain of Unknown Function with PDB structure (DUF3855) TM0876 PF01545 Cation efflux family TM0876 PF16916 TM0876 TM0877 PF00113 Enolase, C-terminal TIM barrel domain TM0877 PF03952 Enolase, N-terminal domain TM0878 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TM0878 PF17147 TM0878 TM0879 PF00037 4Fe-4S binding domain TM0879 PF12837 4Fe-4S binding domain TM0880 PF03977 TM0880 TM0881 PF04204 Homoserine O-succinyltransferase TM0882 PF01053 Cys/Met metabolism PLP-dependent enzyme TM0883 PF03309 Type III pantothenate kinase TM0884 PF04055 Radical SAM superfamily TM0885 PF02887 Pyruvate kinase, alpha/beta domain TM0886 PF00905 Penicillin binding protein transpeptidase domain TM0886 PF00912 Transglycosylase TM0887 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TM0888 PF04263 Thiamin pyrophosphokinase, catalytic domain TM0888 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain TM0889 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TM0889 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal TM0889 PF13288 DXP reductoisomerase C-terminal domain TM0890 PF02163 Peptidase family M50 TM0890 PF13180 PDZ domain TM0891 PF04551 GcpE protein TM0892 PF00571 CBS domain TM0892 PF01842 ACT domain TM0893 PF02673 TM0893 TM0894 PF00753 Metallo-beta-lactamase superfamily TM0895 PF00534 Glycosyl transferases group 1 TM0895 PF08323 Starch synthase catalytic domain TM0896 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain TM0896 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain TM0897 PF04232 Stage V sporulation protein S (SpoVS) TM0902 PF04542 Sigma-70 region 2 TM0902 PF04545 Sigma-70, region 4 TM0903 PF03975 CheD chemotactic sensory transduction TM0904 PF04509 CheC-like family TM0905 PF07238 PilZ domain TM0905 PF12945 Flagellar protein YcgR TM0906 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TM0907 PF00448 SRP54-type protein, GTPase domain TM0908 PF00771 FHIPEP family TM0909 PF01312 FlhB HrpN YscU SpaS Family TM0910 PF01311 TM0910 TM0911 PF01008 Initiation factor 2 subunit family TM0912 PF13145 PPIC-type PPIASE domain TM0912 PF13624 SurA N-terminal domain TM0913 PF03819 MazG nucleotide pyrophosphohydrolase domain TM0914 PF01865 Protein of unknown function DUF47 TM0915 PF01351 Ribonuclease HII TM0916 PF01972 Serine dehydrogenase proteinase TM0917 PF01384 TM0917 TM0918 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM0918 PF02743 Cache domain TM0919 PF02566 OsmC-like protein TM0920 PF00465 Iron-containing alcohol dehydrogenase TM0921 PF01464 Transglycosylase SLT domain TM0922 PF01256 Carbohydrate kinase TM0922 PF03853 YjeF-related protein N-terminus TM0923 PF13174 Tetratricopeptide repeat TM0924 PF04055 Radical SAM superfamily TM0924 PF13353 4Fe-4S single cluster domain TM0925 PF02390 Putative methyltransferase TM0926 PF00308 Bacterial dnaA protein TM0926 PF08299 Bacterial dnaA protein helix-turn-helix TM0926 PF11638 DnaA N-terminal domain TM0927 PF13370 4Fe-4S single cluster domain TM0928 PF16236 TM0928 TM0929 PF09967 TM0929 TM0929 PF13203 TM0929 TM0930 PF07728 AAA domain (dynein-related subfamily) TM0932 PF04471 Restriction endonuclease TM0933 PF07676 WD40-like Beta Propeller Repeat TM0934 PF03600 Citrate transporter TM0935 PF00571 CBS domain TM0936 PF01979 Amidohydrolase family TM0937 PF03551 Transcriptional regulator PadR-like family TM0938 PF13649 Methyltransferase domain TM0939 PF02261 Aspartate decarboxylase TM0940 PF00849 RNA pseudouridylate synthase TM0940 PF01479 S4 domain TM0943 PF00120 Glutamine synthetase, catalytic domain TM0943 PF03951 Glutamine synthetase, beta-Grasp domain TM0945 PF10142 PhoPQ-activated pathogenicity-related protein TM0946 PF08309 TM0946 TM0947 PF04250 TM0947 TM0948 PF04055 Radical SAM superfamily TM0948 PF13353 4Fe-4S single cluster domain TM0949 PF00356 Bacterial regulatory proteins, lacI family TM0949 PF13377 Periplasmic binding protein-like domain TM0950 PF16586 TM0950 TM0951 PF02952 L-fucose isomerase, C-terminal domain TM0952 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TM0952 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TM0953 PF02779 Transketolase, pyrimidine binding domain TM0953 PF02780 Transketolase, C-terminal domain TM0954 PF00456 Transketolase, thiamine diphosphate binding domain TM0955 PF02653 TM0955 TM0956 PF00005 ABC transporter TM0957 PF10054 Predicted periplasmic lipoprotein (DUF2291) TM0958 PF13407 Periplasmic binding protein domain TM0959 PF05025 RbsD / FucU transport protein family TM0960 PF00294 pfkB family carbohydrate kinase TM0961 PF04011 LemA family TM0962 PF04536 TLP18 TM0963 PF01432 Peptidase family M3 TM0964 PF01969 Protein of unknown function DUF111 TM0965 PF00731 AIR carboxylase TM0966 PF02540 NAD synthase TM0967 PF00589 Phage integrase family TM0968 PF13302 Acetyltransferase (GNAT) domain TM0969 PF03008 TM0969 TM0970 PF07282 TM0970 TM0972 PF00990 GGDEF domain TM0972 PF17159 TM0972 TM0978 PF01206 Sulfurtransferase TusA TM0978 PF12840 Helix-turn-helix domain TM0979 PF04077 DsrH like protein TM0981 PF02635 DsrE/DsrF-like family TM0982 PF04143 TM0982 TM0983 PF01206 Sulfurtransferase TusA TM0984 PF00207 Alpha-2-macroglobulin family TM0984 PF01835 MG2 domain TM0984 PF07703 Alpha-2-macroglobulin family N-terminal region TM0984 PF10569 Alpha-macro-globulin thiol-ester bond-forming region TM0986 PF06672 TM0986 TM0987 PF06634 TM0987 TM0988 PF04465 TM0988 TM0990 PF00176 SNF2 family N-terminal domain TM0990 PF00271 Helicase conserved C-terminal domain TM0990 PF13020 TM0990 TM0991 PF03235 TM0991 TM0996 PF13192 Thioredoxin domain TM0997 PF03773 TM0997 TM0998 PF01022 Bacterial regulatory protein, arsR family TM1000 PF05168 HEPN domain TM1001 PF01909 Nucleotidyltransferase domain TM1002 PF13596 PAS domain TM1003 PF01385 TM1003 TM1003 PF07282 TM1003 TM1004 PF01814 Hemerythrin HHE cation binding domain TM1004 PF04282 TM1004 TM1005 PF06719 TM1005 TM1005 PF12833 Helix-turn-helix domain TM1006 PF00248 Aldo/keto reductase family TM1009 PF00248 Aldo/keto reductase family TM1010 PF07883 Cupin domain TM1011 PF01637 Archaeal ATPase TM1014 PF04458 TM1014 TM1015 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TM1015 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TM1017 PF00892 EamA-like transporter family TM1021 PF07690 Major Facilitator Superfamily TM1022 PF12146 Putative lysophospholipase TM1023 PF04892 TM1023 TM1024 PF00717 Peptidase S24-like TM1026 PF01385 TM1026 TM1026 PF07282 TM1026 TM1028 PF00005 ABC transporter TM1029 PF12679 TM1029 TM1030 PF00440 Bacterial regulatory proteins, tetR family TM1031 PF00462 Glutaredoxin TM1032 PF12832 MFS_1 like family TM1033 PF00483 Nucleotidyl transferase TM1034 PF02350 UDP-N-acetylglucosamine 2-epimerase TM1035 PF01502 Phosphoribosyl-AMP cyclohydrolase TM1035 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TM1036 PF00977 Histidine biosynthesis protein TM1037 PF00977 Histidine biosynthesis protein TM1038 PF00117 Glutamine amidotransferase class-I TM1039 PF00475 Imidazoleglycerol-phosphate dehydratase TM1040 PF00155 Aminotransferase class I and II TM1041 PF00815 Histidinol dehydrogenase TM1042 PF01634 ATP phosphoribosyltransferase TM1043 PF13393 Histidyl-tRNA synthetase TM1044 PF01385 TM1044 TM1044 PF07282 TM1044 TM1044 PF12323 TM1044 TM1045 PF03600 Citrate transporter TM1046 PF12146 Putative lysophospholipase TM1047 PF03775 Septum formation inhibitor MinC, C-terminal domain TM1048 PF05343 M42 glutamyl aminopeptidase TM1049 PF05343 M42 glutamyl aminopeptidase TM1050 PF05343 M42 glutamyl aminopeptidase TM1052 PF12836 Helix-hairpin-helix motif TM1053 PF03938 Outer membrane protein (OmpH-like) TM1054 PF00005 ABC transporter TM1054 PF12399 Branched-chain amino acid ATP-binding cassette transporter TM1055 PF03641 Possible lysine decarboxylase TM1056 PF03091 CutA1 divalent ion tolerance protein TM1057 PF02080 TrkA-C domain TM1057 PF02254 TrkA-N domain TM1057 PF07885 Ion channel TM1058 PF01645 Conserved region in glutamate synthase TM1059 PF04232 Stage V sporulation protein S (SpoVS) TM1060 PF07690 Major Facilitator Superfamily TM1061 PF10022 TM1061 TM1062 PF00703 Glycosyl hydrolases family 2 TM1062 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TM1062 PF02837 Glycosyl hydrolases family 2, sugar binding domain TM1063 PF00005 ABC transporter TM1063 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM1064 PF00005 ABC transporter TM1064 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM1065 PF00528 Binding-protein-dependent transport system inner membrane component TM1065 PF12911 TM1065 TM1066 PF00528 Binding-protein-dependent transport system inner membrane component TM1067 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM1068 PF02056 Family 4 glycosyl hydrolase TM1068 PF11975 Family 4 glycosyl hydrolase C-terminal domain TM1069 PF00455 TM1069 TM1069 PF08220 DeoR-like helix-turn-helix domain TM1070 PF07100 Anabaena sensory rhodopsin transducer TM1071 PF06134 L-rhamnose isomerase (RhaA) TM1072 PF00596 Class II Aldolase and Adducin N-terminal domain TM1073 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TM1073 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TM1074 PF17132 TM1074 TM1075 PF02540 NAD synthase TM1076 PF12850 Calcineurin-like phosphoesterase superfamily domain TM1077 PF02569 Pantoate-beta-alanine ligase TM1078 PF04417 TM1078 TM1079 PF06325 Ribosomal protein L11 methyltransferase (PrmA) TM1080 PF02502 Ribose/Galactose Isomerase TM1081 PF01740 STAS domain TM1082 PF00717 Peptidase S24-like TM1082 PF01726 LexA DNA binding domain TM1083 PF01951 Archease protein family (MTH1598/TM1083) TM1084 PF00521 DNA gyrase/topoisomerase IV, subunit A TM1084 PF03989 DNA gyrase C-terminal domain, beta-propeller TM1085 PF01588 Putative tRNA binding domain TM1085 PF08264 Anticodon-binding domain of tRNA TM1085 PF09334 tRNA synthetases class I (M) TM1086 PF14505 Domain of unknown function (DUF4438) TM1087 PF01694 Rhomboid family TM1088 PF02080 TrkA-C domain TM1088 PF02254 TrkA-N domain TM1089 PF02386 Cation transport protein TM1090 PF03129 Anticodon binding domain TM1090 PF13393 Histidyl-tRNA synthetase TM1093 PF00750 tRNA synthetases class I (R) TM1093 PF03485 Arginyl tRNA synthetase N terminal domain TM1093 PF05746 DALR anticodon binding domain TM1094 PF05958 tRNA (Uracil-5-)-methyltransferase TM1095 PF00206 Lyase TM1095 PF10397 Adenylosuccinate lyase C-terminus TM1096 PF00709 Adenylosuccinate synthetase TM1097 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TM1097 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TM1098 PF02517 CAAX protease self-immunity TM1099 PF02223 Thymidylate kinase TM1100 PF12698 ABC-2 family transporter protein TM1101 PF12850 Calcineurin-like phosphoesterase superfamily domain TM1102 PF00035 Double-stranded RNA binding motif TM1102 PF14622 Ribonuclease-III-like TM1103 PF04055 Radical SAM superfamily TM1103 PF16199 TM1103 TM1104 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TM1105 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains TM1106 PF01899 TM1106 TM1108 PF03334 TM1108 TM1109 PF00497 Bacterial extracellular solute-binding proteins, family 3 TM1109 PF13244 TM1109 TM1110 PF04039 TM1110 TM1112 PF05899 Protein of unknown function (DUF861) TM1116 PF06030 TM1116 TM1117 PF00263 TM1117 TM1119 PF03704 Bacterial transcriptional activator domain TM1120 PF13416 Bacterial extracellular solute-binding protein TM1121 PF00528 Binding-protein-dependent transport system inner membrane component TM1122 PF00528 Binding-protein-dependent transport system inner membrane component TM1123 PF02465 TM1123 TM1123 PF07195 TM1123 TM1123 PF07196 Flagellin hook IN motif TM1124 PF03646 FlaG protein TM1128 PF00210 Ferritin-like domain TM1129 PF01048 Phosphorylase superfamily TM1130 PF01515 Phosphate acetyl/butaryl transferase TM1131 PF00155 Aminotransferase class I and II TM1132 PF07726 ATPase family associated with various cellular activities (AAA) TM1133 PF01882 TM1133 TM1135 PF13458 Periplasmic binding protein TM1136 PF02653 TM1136 TM1137 PF02653 TM1137 TM1138 PF00005 ABC transporter TM1138 PF12399 Branched-chain amino acid ATP-binding cassette transporter TM1139 PF00005 ABC transporter TM1140 PF00571 CBS domain TM1141 PF02683 TM1141 TM1142 PF13098 Thioredoxin-like domain TM1143 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM1143 PF00672 HAMP domain TM1145 PF01966 HD domain TM1146 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM1146 PF00672 HAMP domain TM1147 PF01966 HD domain TM1148 PF00180 Isocitrate/isopropylmalate dehydrogenase TM1149 PF00528 Binding-protein-dependent transport system inner membrane component TM1150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM1151 PF00005 ABC transporter TM1151 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM1152 PF00005 ABC transporter TM1152 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM1153 PF00528 Binding-protein-dependent transport system inner membrane component TM1153 PF12911 TM1153 TM1154 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TM1155 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain TM1155 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain TM1156 PF04024 TM1156 TM1158 PF00117 Glutamine amidotransferase class-I TM1160 PF00326 Prolyl oligopeptidase family TM1161 PF00571 CBS domain TM1161 PF01769 Divalent cation transporter TM1161 PF03448 MgtE intracellular N domain TM1162 PF12706 Beta-lactamase superfamily domain TM1163 PF00990 GGDEF domain TM1164 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TM1164 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TM1165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TM1165 PF12367 TM1165 TM1166 PF04055 Radical SAM superfamily TM1169 PF13561 Enoyl-(Acyl carrier protein) reductase TM1170 PF00497 Bacterial extracellular solute-binding proteins, family 3 TM1170 PF01966 HD domain TM1171 PF00027 Cyclic nucleotide-binding domain TM1171 PF13545 Crp-like helix-turn-helix domain TM1172 PF03063 Prismane/CO dehydrogenase family TM1173 PF01758 Sodium Bile acid symporter family TM1175 PF13187 4Fe-4S dicluster domain TM1176 PF01022 Bacterial regulatory protein, arsR family TM1177 PF13419 Haloacid dehalogenase-like hydrolase TM1178 PF00583 Acetyltransferase (GNAT) family TM1179 PF02561 Flagellar protein FliS TM1181 PF00293 NUDIX domain TM1182 PF02463 RecF/RecN/SMC N terminal domain TM1182 PF06470 SMC proteins Flexible Hinge Domain TM1183 PF00248 Aldo/keto reductase family TM1183 PF13534 4Fe-4S dicluster domain TM1184 PF00990 GGDEF domain TM1184 PF13426 PAS domain TM1185 PF02142 MGS-like domain TM1186 PF09723 TM1186 TM1187 PF01594 TM1187 TM1188 PF01757 TM1188 TM1189 PF07693 TM1189 TM1190 PF00288 GHMP kinases N terminal domain TM1190 PF08544 GHMP kinases C terminal TM1190 PF10509 Galactokinase galactose-binding signature TM1191 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain TM1191 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain TM1192 PF02065 Melibiase TM1193 PF00703 Glycosyl hydrolases family 2 TM1193 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TM1193 PF02837 Glycosyl hydrolases family 2, sugar binding domain TM1193 PF02929 Beta galactosidase small chain TM1193 PF16353 TM1193 TM1194 PF00005 ABC transporter TM1194 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM1195 PF02449 Beta-galactosidase TM1195 PF08532 Beta-galactosidase trimerisation domain TM1195 PF08533 Beta-galactosidase C-terminal domain TM1196 PF00005 ABC transporter TM1196 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM1197 PF00528 Binding-protein-dependent transport system inner membrane component TM1198 PF00528 Binding-protein-dependent transport system inner membrane component TM1199 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM1200 PF00356 Bacterial regulatory proteins, lacI family TM1200 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family TM1201 PF07532 TM1201 TM1201 PF07745 Glycosyl hydrolase family 53 TM1202 PF00528 Binding-protein-dependent transport system inner membrane component TM1203 PF00528 Binding-protein-dependent transport system inner membrane component TM1203 PF16237 TM1203 TM1203 PF16296 TM1203 TM1204 PF13416 Bacterial extracellular solute-binding protein TM1205 PF01899 TM1205 TM1206 PF04066 TM1206 TM1207 PF03334 TM1207 TM1208 PF13244 TM1208 TM1209 PF04039 TM1209 TM1210 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TM1211 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains TM1212 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains TM1213 PF00146 NADH dehydrogenase TM1214 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TM1215 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TM1216 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TM1217 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM1217 PF12838 4Fe-4S dicluster domain TM1217 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TM1218 PF00356 Bacterial regulatory proteins, lacI family TM1218 PF13377 Periplasmic binding protein-like domain TM1219 PF00005 ABC transporter TM1219 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM1220 PF00005 ABC transporter TM1220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM1221 PF00528 Binding-protein-dependent transport system inner membrane component TM1222 PF00528 Binding-protein-dependent transport system inner membrane component TM1223 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM1224 PF00480 ROK family TM1225 PF04041 Domain of unknown function (DUF377) TM1226 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM1227 PF00150 Cellulase (glycosyl hydrolase family 5) TM1227 PF09212 Carbohydrate binding module 27 TM1228 PF01380 SIS domain TM1228 PF01418 Helix-turn-helix domain, rpiR family TM1229 PF00535 Glycosyl transferase family 2 TM1230 PF00534 Glycosyl transferases group 1 TM1230 PF13439 Glycosyltransferase Family 4 TM1231 PF01074 Glycosyl hydrolases family 38 N-terminal domain TM1232 PF00005 ABC transporter TM1233 PF00528 Binding-protein-dependent transport system inner membrane component TM1234 PF00528 Binding-protein-dependent transport system inner membrane component TM1235 PF13416 Bacterial extracellular solute-binding protein TM1237 PF04055 Radical SAM superfamily TM1237 PF13353 4Fe-4S single cluster domain TM1238 PF00580 UvrD/REP helicase N-terminal domain TM1238 PF13361 UvrD-like helicase C-terminal domain TM1239 PF02681 TM1239 TM1240 PF01926 50S ribosome-binding GTPase TM1240 PF06071 Protein of unknown function (DUF933) TM1243 PF01259 SAICAR synthetase TM1244 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase TM1245 PF13507 CobB/CobQ-like glutamine amidotransferase domain TM1246 PF00586 AIR synthase related protein, N-terminal domain TM1246 PF02769 AIR synthase related protein, C-terminal domain TM1246 PF16904 TM1246 TM1247 PF00156 Phosphoribosyl transferase domain TM1247 PF13537 Glutamine amidotransferase domain TM1248 PF00551 Formyl transferase TM1249 PF01808 AICARFT/IMPCHase bienzyme TM1249 PF02142 MGS-like domain TM1250 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TM1250 PF02843 Phosphoribosylglycinamide synthetase, C domain TM1250 PF02844 Phosphoribosylglycinamide synthetase, N domain TM1251 PF00586 AIR synthase related protein, N-terminal domain TM1251 PF02769 AIR synthase related protein, C-terminal domain TM1253 PF00795 Carbon-nitrogen hydrolase TM1253 PF02540 NAD synthase TM1254 PF13419 Haloacid dehalogenase-like hydrolase TM1255 PF00155 Aminotransferase class I and II TM1256 PF00005 ABC transporter TM1256 PF00664 ABC transporter transmembrane region TM1257 PF09378 HAS barrel domain TM1258 PF00512 His Kinase A (phospho-acceptor) domain TM1258 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM1259 PF00072 Response regulator receiver domain TM1259 PF00486 Transcriptional regulatory protein, C terminal TM1260 PF01895 PhoU domain TM1261 PF00005 ABC transporter TM1262 PF00528 Binding-protein-dependent transport system inner membrane component TM1263 PF00528 Binding-protein-dependent transport system inner membrane component TM1264 PF12849 PBP superfamily domain TM1265 PF13173 AAA domain TM1267 PF04055 Radical SAM superfamily TM1267 PF06968 Biotin and Thiamin Synthesis associated domain TM1269 PF04055 Radical SAM superfamily TM1269 PF06968 Biotin and Thiamin Synthesis associated domain TM1270 PF01053 Cys/Met metabolism PLP-dependent enzyme TM1271 PF13544 TM1271 TM1272 PF01425 Amidase TM1273 PF02637 GatB domain TM1273 PF02934 GatB/GatE catalytic domain TM1275 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TM1276 PF00005 ABC transporter TM1276 PF03459 TOBE domain TM1277 PF14450 Cell division protein FtsA TM1278 PF00488 MutS domain V TM1278 PF01713 Smr domain TM1280 PF01869 BadF/BadG/BcrA/BcrD ATPase family TM1281 PF02056 Family 4 glycosyl hydrolase TM1281 PF11975 Family 4 glycosyl hydrolase C-terminal domain TM1283 PF02660 TM1283 TM1284 PF00355 Rieske [2Fe-2S] domain TM1286 PF01717 Cobalamin-independent synthase, Catalytic domain TM1286 PF08267 Cobalamin-independent synthase, N-terminal domain TM1287 PF07883 Cupin domain TM1288 PF04055 Radical SAM superfamily TM1288 PF13394 4Fe-4S single cluster domain TM1289 PF13187 4Fe-4S dicluster domain TM1290 PF02579 Dinitrogenase iron-molybdenum cofactor TM1291 PF00037 4Fe-4S binding domain TM1291 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TM1292 PF00037 4Fe-4S binding domain TM1292 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TM1293 PF08241 Methyltransferase domain TM1294 PF03176 MMPL family TM1295 PF00753 Metallo-beta-lactamase superfamily TM1296 PF00075 RNase H TM1296 PF01693 Caulimovirus viroplasmin TM1297 PF00248 Aldo/keto reductase family TM1301 PF04055 Radical SAM superfamily TM1301 PF13353 4Fe-4S single cluster domain TM1302 PF00005 ABC transporter TM1303 PF01061 TM1303 TM1306 PF01061 TM1306 TM1310 PF00005 ABC transporter TM1310 PF00664 ABC transporter transmembrane region TM1312 PF07927 YcfA-like protein TM1313 PF15919 TM1313 TM1314 PF01381 Helix-turn-helix TM1317 PF04055 Radical SAM superfamily TM1317 PF13186 Iron-sulfur cluster-binding domain TM1317 PF13353 4Fe-4S single cluster domain TM1319 PF00005 ABC transporter TM1319 PF00664 ABC transporter transmembrane region TM1321 PF15919 TM1321 TM1324 PF04055 Radical SAM superfamily TM1324 PF13353 4Fe-4S single cluster domain TM1325 PF04055 Radical SAM superfamily TM1325 PF13353 4Fe-4S single cluster domain TM1326 PF01061 TM1326 TM1327 PF00005 ABC transporter TM1328 PF00005 ABC transporter TM1328 PF00664 ABC transporter transmembrane region TM1330 PF01381 Helix-turn-helix TM1334 PF04055 Radical SAM superfamily TM1336 PF07690 Major Facilitator Superfamily TM1340 PF00355 Rieske [2Fe-2S] domain TM1344 PF00312 Ribosomal protein S15 TM1345 PF00013 KH domain TM1345 PF00575 S1 RNA binding domain TM1345 PF01138 3' exoribonuclease family, domain 1 TM1345 PF03725 3' exoribonuclease family, domain 2 TM1345 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TM1346 PF00675 Insulinase (Peptidase family M16) TM1346 PF05193 Peptidase M16 inactive domain TM1347 PF00478 IMP dehydrogenase / GMP reductase domain TM1347 PF00571 CBS domain TM1349 PF01594 TM1349 TM1350 PF12146 Putative lysophospholipase TM1351 PF00749 tRNA synthetases class I (E and Q), catalytic domain TM1352 PF13263 PHP-associated TM1354 PF00571 CBS domain TM1354 PF13581 Histidine kinase-like ATPase domain TM1355 PF07085 DRTGG domain TM1356 PF04246 TM1356 TM1357 PF01139 tRNA-splicing ligase RtcB TM1358 PF01927 TM1358 TM1359 PF00512 His Kinase A (phospho-acceptor) domain TM1359 PF00989 PAS fold TM1359 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM1360 PF00072 Response regulator receiver domain TM1361 PF00133 tRNA synthetases class I (I, L, M and V) TM1361 PF06827 Zinc finger found in FPG and IleRS TM1361 PF08264 Anticodon-binding domain of tRNA TM1362 PF00437 Type II/IV secretion system protein TM1363 PF00472 RF-1 domain TM1363 PF03462 PCRF domain TM1364 PF00460 Flagella basal body rod protein TM1365 PF00460 Flagella basal body rod protein TM1365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TM1366 PF02049 TM1366 TM1367 PF04126 Cyclophilin-like TM1368 PF00005 ABC transporter TM1369 PF01458 Uncharacterized protein family (UPF0051) TM1370 PF01458 Uncharacterized protein family (UPF0051) TM1371 PF00266 Aminotransferase class-V TM1372 PF01592 NifU-like N terminal domain TM1374 PF00300 Histidine phosphatase superfamily (branch 1) TM1375 PF13416 Bacterial extracellular solute-binding protein TM1376 PF00005 ABC transporter TM1376 PF08402 TOBE domain TM1377 PF00528 Binding-protein-dependent transport system inner membrane component TM1378 PF00528 Binding-protein-dependent transport system inner membrane component TM1379 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TM1379 PF02403 Seryl-tRNA synthetase N-terminal domain TM1380 PF04452 RNA methyltransferase TM1382 PF00293 NUDIX domain TM1383 PF00288 GHMP kinases N terminal domain TM1384 PF00156 Phosphoribosyl transferase domain TM1385 PF00342 Phosphoglucose isomerase TM1387 PF01121 Dephospho-CoA kinase TM1388 PF03602 Conserved hypothetical protein 95 TM1389 PF08241 Methyltransferase domain TM1390 PF03706 TM1390 TM1391 PF00004 ATPase family associated with various cellular activities (AAA) TM1391 PF02151 UvrB/uvrC motif TM1391 PF02861 Clp amino terminal domain TM1391 PF07724 AAA domain (Cdc48 subfamily) TM1391 PF10431 C-terminal, D2-small domain, of ClpB protein TM1392 PF08899 TM1392 TM1393 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TM1394 PF01430 Hsp33 protein TM1396 PF01411 tRNA synthetases class II (A) TM1396 PF02272 DHHA1 domain TM1396 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TM1397 PF01148 Cytidylyltransferase family TM1398 PF01255 Putative undecaprenyl diphosphate synthase TM1399 PF01765 Ribosome recycling factor TM1400 PF00266 Aminotransferase class-V TM1401 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TM1401 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TM1403 PF00005 ABC transporter TM1403 PF13732 TM1403 TM1404 PF01061 TM1404 TM1405 PF00534 Glycosyl transferases group 1 TM1405 PF11997 TM1405 TM1408 PF16933 TM1408 TM1409 PF09960 TM1409 TM1410 PF03537 Glycoside-hydrolase family GH114 TM1411 PF11997 TM1411 TM1411 PF13087 AAA domain TM1414 PF00251 Glycosyl hydrolases family 32 N-terminal domain TM1415 PF00459 Inositol monophosphatase family TM1416 PF01458 Uncharacterized protein family (UPF0051) TM1417 PF00005 ABC transporter TM1419 PF01658 Myo-inositol-1-phosphate synthase TM1419 PF07994 Myo-inositol-1-phosphate synthase TM1420 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin TM1421 PF02906 Iron only hydrogenase large subunit, C-terminal domain TM1421 PF13187 4Fe-4S dicluster domain TM1422 PF04060 Putative Fe-S cluster TM1423 PF07228 Stage II sporulation protein E (SpoIIE) TM1424 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin TM1425 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin TM1425 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TM1425 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TM1425 PF14697 4Fe-4S dicluster domain TM1426 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin TM1426 PF02256 Iron hydrogenase small subunit TM1426 PF02906 Iron only hydrogenase large subunit, C-terminal domain TM1426 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TM1426 PF12838 4Fe-4S dicluster domain TM1426 PF13510 2Fe-2S iron-sulfur cluster binding domain TM1427 PF02629 CoA binding domain TM1427 PF06971 Putative DNA-binding protein N-terminus TM1428 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TM1428 PF00672 HAMP domain TM1428 PF17200 TM1428 TM1429 PF00230 Major intrinsic protein TM1430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TM1430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TM1431 PF04309 Glycerol-3-phosphate responsive antiterminator TM1432 PF01266 FAD dependent oxidoreductase TM1432 PF04324 BFD-like [2Fe-2S] binding domain TM1433 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM1434 PF07892 Protein of unknown function (DUF1667) TM1435 PF13380 CoA binding domain TM1436 PF04309 Glycerol-3-phosphate responsive antiterminator TM1437 PF00398 Ribosomal RNA adenine dimethylase TM1439 PF16258 TM1439 TM1440 PF01008 Initiation factor 2 subunit family TM1441 PF00152 tRNA synthetases class II (D, K and N) TM1441 PF01336 OB-fold nucleic acid binding domain TM1441 PF02938 GAD domain TM1442 PF01740 STAS domain TM1443 PF02224 Cytidylate kinase TM1444 PF02401 LytB protein TM1446 PF01926 50S ribosome-binding GTPase TM1446 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TM1447 PF02660 TM1447 TM1449 PF13414 TPR repeat TM1450 PF00270 DEAD/DEAH box helicase TM1450 PF00271 Helicase conserved C-terminal domain TM1450 PF02559 CarD-like/TRCF domain TM1450 PF03461 TRCF domain TM1451 PF00140 Sigma-70 factor, region 1 TM1451 PF03979 Sigma-70 factor, region 1 TM1451 PF04539 Sigma-70 region 3 TM1451 PF04542 Sigma-70 region 2 TM1451 PF04545 Sigma-70, region 4 TM1452 PF01807 CHC2 zinc finger TM1452 PF08275 DNA primase catalytic core, N-terminal domain TM1452 PF13155 Toprim-like TM1453 PF00380 Ribosomal protein S9/S16 TM1454 PF00572 Ribosomal protein L13 TM1455 PF12822 Protein of unknown function (DUF3816) TM1456 PF01016 Ribosomal L27 protein TM1457 PF04327 Protein of unknown function (DUF464) TM1458 PF00829 Ribosomal prokaryotic L21 protein TM1459 PF07883 Cupin domain TM1460 PF01424 R3H domain TM1460 PF13083 KH domain TM1460 PF14804 Jag N-terminus TM1461 PF02096 60Kd inner membrane protein TM1462 PF01809 TM1462 TM1463 PF00825 Ribonuclease P TM1463a PF00468 Ribosomal protein L34 TM1464 PF04227 Indigoidine synthase A like protein TM1465 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TM1466 PF01926 50S ribosome-binding GTPase TM1467 PF01966 HD domain TM1468 PF02645 Uncharacterised protein, DegV family COG1307 TM1469 PF00480 ROK family TM1470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TM1470 PF07497 Rho termination factor, RNA-binding domain TM1470 PF07498 Rho termination factor, N-terminal domain TM1471 PF01196 Ribosomal protein L17 TM1472 PF01000 RNA polymerase Rpb3/RpoA insert domain TM1472 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TM1472 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TM1473 PF00163 Ribosomal protein S4/S9 N-terminal domain TM1473 PF01479 S4 domain TM1474 PF00411 Ribosomal protein S11 TM1475 PF00416 Ribosomal protein S13/S18 TM1476 PF00444 Ribosomal protein L36 TM1478 PF00557 Metallopeptidase family M24 TM1479 PF00406 Adenylate kinase TM1479 PF05191 Adenylate kinase, active site lid TM1480 PF00344 SecY translocase TM1481 PF00828 Ribosomal protein L18e/L15 TM1482 PF00327 Ribosomal protein L30p/L7e TM1483 PF00333 Ribosomal protein S5, N-terminal domain TM1483 PF03719 Ribosomal protein S5, C-terminal domain TM1484 PF00861 Ribosomal L18p/L5e family TM1485 PF00347 Ribosomal protein L6 TM1486 PF00410 Ribosomal protein S8 TM1487 PF00253 Ribosomal protein S14p/S29e TM1488 PF00281 Ribosomal protein L5 TM1488 PF00673 ribosomal L5P family C-terminus TM1489 PF00467 KOW motif TM1489 PF17136 TM1489 TM1490 PF00238 Ribosomal protein L14p/L23e TM1491 PF00366 Ribosomal protein S17 TM1492 PF00831 Ribosomal L29 protein TM1493 PF00252 Ribosomal protein L16p/L10e TM1494 PF00189 Ribosomal protein S3, C-terminal domain TM1494 PF07650 KH domain TM1495 PF00237 Ribosomal protein L22p/L17e TM1496 PF00203 Ribosomal protein S19 TM1497 PF00181 Ribosomal Proteins L2, RNA binding domain TM1497 PF03947 Ribosomal Proteins L2, C-terminal domain TM1498 PF00276 Ribosomal protein L23 TM1499 PF00573 Ribosomal protein L4/L1 family TM1500 PF00297 Ribosomal protein L3 TM1501 PF00338 Ribosomal protein S10p/S20e TM1502 PF00009 Elongation factor Tu GTP binding domain TM1502 PF03143 Elongation factor Tu C-terminal domain TM1502 PF03144 Elongation factor Tu domain 2 TM1503 PF00009 Elongation factor Tu GTP binding domain TM1503 PF00679 Elongation factor G C-terminus TM1503 PF03144 Elongation factor Tu domain 2 TM1503 PF03764 Elongation factor G, domain IV TM1503 PF14492 Elongation Factor G, domain II TM1504 PF00177 Ribosomal protein S7p/S5e TM1505 PF00164 Ribosomal protein S12/S23 TM1506 PF08973 Domain of unknown function (DUF1893) TM1507 PF02562 PhoH-like protein TM1508 PF01966 HD domain TM1508 PF07698 TM1508 TM1509 PF02130 Uncharacterized protein family UPF0054 TM1510 PF06245 TM1510 TM1511 PF04298 TM1511 TM1512 PF01029 NusB family TM1512 PF01189 NOL1/NOP2/sun family TM1513 PF05636 HIGH Nucleotidyl Transferase TM1515 PF01475 Ferric uptake regulator family TM1516 PF01546 Peptidase family M20/M25/M40 TM1516 PF07687 Peptidase dimerisation domain TM1517 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TM1517 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TM1518 PF00696 Amino acid kinase family TM1518 PF13840 ACT domain TM1519 PF00132 Bacterial transferase hexapeptide (six repeats) TM1519 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal TM1519 PF14602 Hexapeptide repeat of succinyl-transferase TM1520 PF01113 Dihydrodipicolinate reductase, N-terminus TM1520 PF05173 Dihydrodipicolinate reductase, C-terminus TM1521 PF00701 Dihydrodipicolinate synthetase family TM1522 PF01678 Diaminopimelate epimerase TM1523 PF01118 Semialdehyde dehydrogenase, NAD binding domain TM1523 PF02774 Semialdehyde dehydrogenase, dimerisation domain TM1524 PF01670 Glycosyl hydrolase family 12 TM1525 PF01670 Glycosyl hydrolase family 12 TM1526 PF02915 Rubrerythrin TM1527 PF02082 Transcriptional regulator TM1528 PF01040 UbiA prenyltransferase family TM1529 PF02517 CAAX protease self-immunity TM1530 PF01012 Electron transfer flavoprotein domain TM1531 PF00766 Electron transfer flavoprotein FAD-binding domain TM1531 PF01012 Electron transfer flavoprotein domain TM1532 PF01494 FAD binding domain TM1533 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase TM1535 PF00348 Polyprenyl synthetase TM1536 PF06168 TM1536 TM1537 PF02310 B12 binding domain TM1537 PF04055 Radical SAM superfamily TM1538 PF10135 TM1538 TM1539 PF02119 TM1539 TM1540 PF02107 TM1540 TM1541 PF13144 SAF-like TM1542 PF00460 Flagella basal body rod protein TM1542 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TM1543 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TM1544 PF06723 MreB/Mbl protein TM1545 PF03652 Uncharacterised protein family (UPF0081) TM1546 PF01368 DHH family TM1546 PF02272 DHHA1 domain TM1547 PF01966 HD domain TM1548 PF02719 Polysaccharide biosynthesis protein TM1548 PF13727 CoA-binding domain TM1549 PF00953 Glycosyl transferase family 4 TM1550 PF07136 TM1550 TM1551 PF01871 AMMECR1 TM1552 PF04055 Radical SAM superfamily TM1553 PF02424 ApbE family TM1554 PF07009 Protein of unknown function (DUF1312) TM1555 PF07456 TM1555 TM1556 PF02545 Maf-like protein TM1557 PF04002 RadC-like JAB domain TM1558 PF01966 HD domain TM1559 PF01791 DeoC/LacD family aldolase TM1560 PF04961 Formiminotransferase-cyclodeaminase TM1561 PF01702 Queuine tRNA-ribosyltransferase TM1563 PF00924 Mechanosensitive ion channel TM1564 PF00708 Acylphosphatase TM1565 PF00448 SRP54-type protein, GTPase domain TM1565 PF02881 SRP54-type protein, helical bundle domain TM1565 PF02978 Signal peptide binding domain TM1566 PF00886 Ribosomal protein S16 TM1567 PF13083 KH domain TM1568 PF01782 RimM N-terminal domain TM1568 PF05239 PRC-barrel domain TM1569 PF01746 tRNA (Guanine-1)-methyltransferase TM1570 PF09936 SAM-dependent RNA methyltransferase TM1571 PF01245 Ribosomal protein L19 TM1572 PF00717 Peptidase S24-like TM1572 PF10502 Signal peptidase, peptidase S26 TM1573 PF13360 PQQ-like domain TM1573 PF13570 PQQ-like domain TM1574 PF01416 tRNA pseudouridine synthase TM1576 PF01479 S4 domain TM1576 PF01728 FtsJ-like methyltransferase TM1578 PF00271 Helicase conserved C-terminal domain TM1578 PF01043 SecA preprotein cross-linking domain TM1578 PF07516 SecA Wing and Scaffold domain TM1578 PF07517 SecA DEAD-like domain TM1579 PF00472 RF-1 domain TM1579 PF03462 PCRF domain TM1580 PF02954 Bacterial regulatory protein, Fis family TM1581 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase TM1582 PF04308 TM1582 TM1584 PF00156 Phosphoribosyl transferase domain TM1585 PF05161 MOFRL family TM1585 PF13660 Domain of unknown function (DUF4147) TM1586 PF14512 Putative TM nitroreductase TM1588 PF00990 GGDEF domain TM1589 PF03415 Clostripain family TM1590 PF00707 Translation initiation factor IF-3, C-terminal domain TM1590 PF05198 Translation initiation factor IF-3, N-terminal domain TM1591 PF01632 Ribosomal protein L35 TM1592 PF00453 Ribosomal protein L20 TM1593 PF10609 ParA/MinD ATPase like TM1594 PF00990 GGDEF domain TM1595 PF01368 DHH family TM1595 PF02272 DHHA1 domain TM1596 PF01048 Phosphorylase superfamily TM1597 PF01168 Alanine racemase, N-terminal domain TM1598 PF04542 Sigma-70 region 2 TM1598 PF08281 Sigma-70, region 4 TM1601 PF04055 Radical SAM superfamily TM1601 PF12836 Helix-hairpin-helix motif TM1602 PF02829 3H domain TM1602 PF08279 HTH domain TM1603 PF07690 Major Facilitator Superfamily TM1604 PF00696 Amino acid kinase family TM1605 PF00889 Elongation factor TS TM1606 PF10150 Ribonuclease E/G family TM1607 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TM1607 PF16321 TM1607 TM1608 PF02645 Uncharacterised protein, DegV family COG1307 TM1609 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TM1610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TM1610 PF02874 ATP synthase alpha/beta family, beta-barrel domain TM1611 PF00231 ATP synthase TM1612 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TM1612 PF00306 ATP synthase alpha/beta chain, C terminal domain TM1612 PF02874 ATP synthase alpha/beta family, beta-barrel domain TM1613 PF00213 ATP synthase delta (OSCP) subunit TM1614 PF00430 ATP synthase B/B' CF(0) TM1615 PF00137 ATP synthase subunit C TM1616 PF00119 ATP synthase A chain TM1617 PF03899 TM1617 TM1618 PF13690 Chemotaxis phosphatase CheX TM1619 PF00476 DNA polymerase family A TM1619 PF01367 5'-3' exonuclease, C-terminal SAM fold TM1619 PF01612 3'-5' exonuclease TM1619 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TM1620 PF02627 Carboxymuconolactone decarboxylase family TM1621 PF03009 Glycerophosphoryl diester phosphodiesterase family TM1622 PF11586 Protein of unknown function (DUF3242) TM1623 PF00009 Elongation factor Tu GTP binding domain TM1623 PF00679 Elongation factor G C-terminus TM1623 PF03144 Elongation factor Tu domain 2 TM1623 PF06421 GTP-binding protein LepA C-terminus TM1624 PF00703 Glycosyl hydrolases family 2 TM1624 PF02837 Glycosyl hydrolases family 2, sugar binding domain TM1625 PF02151 UvrB/uvrC motif TM1626 PF01195 Peptidyl-tRNA hydrolase TM1627 PF01386 Ribosomal L25p family TM1627 PF14693 Ribosomal protein TL5, C-terminal domain TM1628 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TM1628 PF14572 Phosphoribosyl synthetase-associated domain TM1629 PF00132 Bacterial transferase hexapeptide (six repeats) TM1629 PF12804 MobA-like NTP transferase domain TM1631 PF01904 Protein of unknown function DUF72 TM1632 PF02367 Uncharacterised P-loop hydrolase UPF0079 TM1633 PF00004 ATPase family associated with various cellular activities (AAA) TM1633 PF02190 ATP-dependent protease La (LON) domain TM1633 PF05362 Lon protease (S16) C-terminal proteolytic domain TM1635 PF00149 Calcineurin-like phosphoesterase TM1636 PF13175 AAA ATPase domain TM1636 PF13558 Putative exonuclease SbcCD, C subunit TM1638 PF00005 ABC transporter TM1639 PF00175 Oxidoreductase NAD-binding domain TM1639 PF00970 Oxidoreductase FAD-binding domain TM1639 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TM1640 PF07992 Pyridine nucleotide-disulphide oxidoreductase TM1640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TM1641 PF00186 Dihydrofolate reductase TM1642 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TM1642 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain TM1642 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TM1642 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain TM1643 PF01958 Domain of unknown function DUF108 TM1643 PF03447 Homoserine dehydrogenase, NAD binding domain TM1644 PF02445 Quinolinate synthetase A protein TM1645 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TM1645 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TM1646 PF03885 Protein of unknown function (DUF327) TM1648 PF01966 HD domain TM1649 PF04456 Protein of unknown function (DUF503) TM1650 PF00128 Alpha amylase, catalytic domain TM1651 PF00009 Elongation factor Tu GTP binding domain TM1651 PF00679 Elongation factor G C-terminus TM1651 PF03764 Elongation factor G, domain IV TM1651 PF14492 Elongation Factor G, domain II TM1652 PF09992 Predicted periplasmic protein (DUF2233) TM1653 PF00591 Glycosyl transferase family, a/b domain TM1653 PF02885 Glycosyl transferase family, helical bundle domain TM1653 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TM1654 PF00512 His Kinase A (phospho-acceptor) domain TM1654 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM1654 PF13426 PAS domain TM1655 PF00072 Response regulator receiver domain TM1655 PF00486 Transcriptional regulatory protein, C terminal TM1657 PF01649 Ribosomal protein S20 TM1658 PF00438 S-adenosylmethionine synthetase, N-terminal domain TM1658 PF02772 S-adenosylmethionine synthetase, central domain TM1658 PF02773 S-adenosylmethionine synthetase, C-terminal domain TM1660 PF01551 Peptidase family M23 TM1661 PF01327 Polypeptide deformylase TM1662 PF01975 Survival protein SurE TM1663 PF00005 ABC transporter TM1664 PF05175 Methyltransferase small domain TM1665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TM1666 PF01546 Peptidase family M20/M25/M40 TM1666 PF07687 Peptidase dimerisation domain TM1667 PF01261 Xylose isomerase-like TIM barrel TM1668 PF02643 Uncharacterized ACR, COG1430 TM1672 PF01312 FlhB HrpN YscU SpaS Family TM1674 PF02698 DUF218 domain TM1675 PF06195 TM1675 TM1677 PF01385 TM1677 TM1677 PF07282 TM1677 TM1678 PF13487 HD domain TM1679 PF00753 Metallo-beta-lactamase superfamily TM1682 PF01966 HD domain TM1682 PF02743 Cache domain TM1683 PF00313 'Cold-shock' DNA-binding domain TM1684 PF01197 Ribosomal protein L31 TM1685 PF00575 S1 RNA binding domain TM1686 PF01476 LysM domain TM1686 PF03734 L,D-transpeptidase catalytic domain TM1687 PF02441 Flavoprotein TM1687 PF04127 DNA / pantothenate metabolism flavoprotein TM1688 PF01192 RNA polymerase Rpb6 TM1689 PF00625 Guanylate kinase TM1690 PF04025 TM1690 TM1691 PF03755 TM1691 TM1691 PF08340 TM1691 TM1692 PF00266 Aminotransferase class-V TM1693 PF01553 Acyltransferase TM1694 PF02568 Thiamine biosynthesis protein (ThiI) TM1694 PF02926 THUMP domain TM1695 PF13414 TPR repeat TM1695 PF14559 Tetratricopeptide repeat TM1696 PF01478 Type IV leader peptidase family TM1696 PF06750 TM1696 TM1697 PF10672 S-adenosylmethionine-dependent methyltransferase TM1698 PF00155 Aminotransferase class I and II TM1699 PF01966 HD domain TM1700 PF13419 Haloacid dehalogenase-like hydrolase TM1701 PF01554 MatE TM1703 PF00884 Sulfatase TM1704 PF13145 PPIC-type PPIASE domain TM1705 PF00152 tRNA synthetases class II (D, K and N) TM1705 PF01336 OB-fold nucleic acid binding domain TM1706 PF01272 Transcription elongation factor, GreA/GreB, C-term TM1706 PF03449 Transcription elongation factor, N-terminal TM1707 PF03477 ATP cone domain TM1708 PF02650 WhiA C-terminal HTH domain TM1708 PF10298 WhiA N-terminal LAGLIDADG-like domain TM1708 PF14527 WhiA LAGLIDADG-like domain TM1709 PF01933 Uncharacterised protein family UPF0052 TM1712 PF05103 DivIVA protein TM1713 PF01205 Uncharacterized protein family UPF0029 TM1714 PF01565 FAD binding domain TM1714 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TM1715 PF04055 Radical SAM superfamily TM1715 PF13394 4Fe-4S single cluster domain TM1716 PF03793 PASTA domain TM1717 PF03193 Protein of unknown function, DUF258 TM1717 PF16745 TM1717 TM1718 PF00834 Ribulose-phosphate 3 epimerase family TM1719 PF00488 MutS domain V TM1719 PF01624 MutS domain I TM1719 PF05188 MutS domain II TM1719 PF05190 MutS family domain IV TM1719 PF05192 MutS domain III TM1720 PF13673 Acetyltransferase (GNAT) domain TM1722 PF00892 EamA-like transporter family TM1723 PF01979 Amidohydrolase family TM1724 PF13561 Enoyl-(Acyl carrier protein) reductase TM1726 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TM1727 PF10728 Domain of unknown function (DUF2520) TM1728 PF02548 Ketopantoate hydroxymethyltransferase TM1729 PF00395 S-layer homology domain TM1730 PF05491 Holliday junction DNA helicase ruvB C-terminus TM1730 PF05496 Holliday junction DNA helicase ruvB N-terminus TM1731 PF01168 Alanine racemase, N-terminal domain TM1732 PF02325 TM1732 TM1733 PF01513 ATP-NAD kinase TM1734 PF01895 PhoU domain TM1735 PF03739 TM1735 TM1736 PF00772 DnaB-like helicase N terminal domain TM1736 PF03796 DnaB-like helicase C terminal domain TM1737 PF01048 Phosphorylase superfamily TM1738 PF02535 TM1738 TM1739 PF09376 NurA domain TM1740 PF00636 Ribonuclease III domain TM1741 PF00588 SpoU rRNA Methylase family TM1741 PF08032 RNA 2'-O ribose methyltransferase substrate binding TM1742 PF13242 HAD-hyrolase-like TM1742 PF13344 Haloacid dehalogenase-like hydrolase TM1743 PF00248 Aldo/keto reductase family TM1744 PF01212 Beta-eliminating lyase TM1746 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TM1747 PF00528 Binding-protein-dependent transport system inner membrane component TM1748 PF00528 Binding-protein-dependent transport system inner membrane component TM1748 PF12911 TM1748 TM1749 PF00005 ABC transporter TM1749 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM1750 PF00005 ABC transporter TM1750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TM1751 PF00150 Cellulase (glycosyl hydrolase family 5) TM1752 PF00150 Cellulase (glycosyl hydrolase family 5) TM1753 PF00271 Helicase conserved C-terminal domain TM1753 PF12344 Ultra-violet resistance protein B TM1754 PF00871 Acetokinase family TM1755 PF01515 Phosphate acetyl/butaryl transferase TM1756 PF00871 Acetokinase family TM1757 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TM1758 PF12838 4Fe-4S dicluster domain TM1759 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TM1759 PF17147 TM1759 TM1761 PF00271 Helicase conserved C-terminal domain TM1761 PF02151 UvrB/uvrC motif TM1761 PF04851 Type III restriction enzyme, res subunit TM1761 PF12344 Ultra-violet resistance protein B TM1762 PF00456 Transketolase, thiamine diphosphate binding domain TM1762 PF02779 Transketolase, pyrimidine binding domain TM1762 PF02780 Transketolase, C-terminal domain TM1763 PF01132 Elongation factor P (EF-P) OB domain TM1763 PF08207 Elongation factor P (EF-P) KOW-like domain TM1763 PF09285 Elongation factor P, C-terminal TM1764 PF03780 TM1764 TM1765 PF01029 NusB family TM1766 PF01268 Formate--tetrahydrofolate ligase TM1767 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TM1767 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TM1768 PF02601 TM1768 TM1768 PF13742 TM1768 TM1769 PF02609 Exonuclease VII small subunit TM1770 PF02779 Transketolase, pyrimidine binding domain TM1770 PF02780 Transketolase, C-terminal domain TM1770 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TM1771 PF03780 TM1771 TM1772 PF02734 DAK2 domain TM1772 PF13684 Dihydroxyacetone kinase family TM1773 PF13181 Tetratricopeptide repeat TM1773 PF13414 TPR repeat TM1773 PF13432 Tetratricopeptide repeat TM1774 PF01676 Metalloenzyme superfamily TM1774 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TM1775 PF03772 TM1775 TM1776 PF01475 Ferric uptake regulator family TM1777 PF00575 S1 RNA binding domain TM1777 PF08529 NusA N-terminal domain TM1777 PF13184 NusA-like KH domain TM1778 PF02576 Uncharacterised BCR, YhbC family COG0779 TM1780 PF00764 Arginosuccinate synthase TM1781 PF00206 Lyase TM1782 PF01118 Semialdehyde dehydrogenase, NAD binding domain TM1782 PF02774 Semialdehyde dehydrogenase, dimerisation domain TM1783 PF01960 ArgJ family TM1784 PF00696 Amino acid kinase family TM1785 PF00202 Aminotransferase class-III TM1787 PF00892 EamA-like transporter family TM1788 PF00990 GGDEF domain TM1791 PF03787 RAMP superfamily TM1792 PF03787 RAMP superfamily TM1793 PF09700 CRISPR-associated protein (Cas_Cmr3) TM1794 PF12469 CRISPR-associated protein TM1795 PF03787 RAMP superfamily TM1796 PF09827 CRISPR associated protein Cas2 TM1797 PF01867 CRISPR associated protein Cas1 TM1798 PF01930 Domain of unknown function DUF83 TM1799 PF00270 DEAD/DEAH box helicase TM1799 PF00271 Helicase conserved C-terminal domain TM1800 PF09704 CRISPR-associated protein (Cas_Cas5) TM1801 PF05107 TM1801 TM1802 PF09484 TM1802 TM1803 PF00226 DnaJ domain TM1807 PF03787 RAMP superfamily TM1808 PF03787 RAMP superfamily TM1809 PF03787 RAMP superfamily TM1810 PF03750 TM1810 TM1811 PF01966 HD domain TM1812 PF09455 CRISPR-associated (Cas) DxTHG family TM1814 PF01881 CRISPR associated protein Cas6 TM1815 PF12838 4Fe-4S dicluster domain TM1816 PF02579 Dinitrogenase iron-molybdenum cofactor TM1817 PF00133 tRNA synthetases class I (I, L, M and V) TM1817 PF08264 Anticodon-binding domain of tRNA TM1817 PF10458 Valyl tRNA synthetase tRNA binding arm TM1818 PF02417 TM1818 TM1819 PF02417 TM1819 TM1820 PF00117 Glutamine amidotransferase class-I TM1820 PF00958 GMP synthase C terminal domain TM1820 PF02568 Thiamine biosynthesis protein (ThiI) TM1822 PF01145 SPFH domain / Band 7 family TM1823 PF01145 SPFH domain / Band 7 family TM1824 PF01501 Glycosyl transferase family 8 TM1825 PF00885 6,7-dimethyl-8-ribityllumazine synthase TM1826 PF00925 GTP cyclohydrolase II TM1826 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TM1827 PF00677 Lumazine binding domain TM1828 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TM1828 PF01872 RibD C-terminal domain TM1830 PF00990 GGDEF domain TM1831 PF01385 TM1831 TM1831 PF07282 TM1831 TM1832 PF01797 Transposase IS200 like TM1833 PF02743 Cache domain TM1834 PF02056 Family 4 glycosyl hydrolase TM1834 PF11975 Family 4 glycosyl hydrolase C-terminal domain TM1835 PF00128 Alpha amylase, catalytic domain TM1836 PF00528 Binding-protein-dependent transport system inner membrane component TM1838 PF16237 TM1838 TM1839 PF13416 Bacterial extracellular solute-binding protein TM1840 PF00128 Alpha amylase, catalytic domain TM1844 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TM1844 PF16561 TM1844 TM1845 PF00128 Alpha amylase, catalytic domain TM1845 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TM1845 PF03714 Bacterial pullanase-associated domain TM1846 PF00400 WD domain, G-beta repeat TM1847 PF00480 ROK family TM1848 PF06165 Glycosyltransferase family 36 TM1848 PF17167 TM1848 TM1849 PF14321 TM1849 TM1851 PF01074 Glycosyl hydrolases family 38 N-terminal domain TM1851 PF07748 Glycosyl hydrolases family 38 C-terminal domain TM1851 PF09261 Alpha mannosidase, middle domain TM1852 PF04041 Domain of unknown function (DUF377) TM1853 PF00528 Binding-protein-dependent transport system inner membrane component TM1854 PF00528 Binding-protein-dependent transport system inner membrane component TM1855 PF13416 Bacterial extracellular solute-binding protein TM1856 PF00356 Bacterial regulatory proteins, lacI family TM1856 PF13377 Periplasmic binding protein-like domain TM1857 PF00013 KH domain TM1857 PF01966 HD domain TM1857 PF12072 TM1857 TM1858 PF02631 RecX family TM1859 PF00154 recA bacterial DNA recombination protein TM1860 PF13563 2'-5' RNA ligase superfamily TM1861 PF01066 CDP-alcohol phosphatidyltransferase TM1862 PF00919 Uncharacterized protein family UPF0004 TM1862 PF04055 Radical SAM superfamily TM1863 PF14385 TM1863 TM1864 PF13413 Helix-turn-helix domain TM1865 PF04493 Endonuclease V TM1866 PF03816 Cell envelope-related transcriptional attenuator domain TM1867 PF00056 lactate/malate dehydrogenase, NAD binding domain TM1867 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TM1868 PF02361 Cobalt transport protein TM1869 PF05362 Lon protease (S16) C-terminal proteolytic domain TM1869 PF13654 AAA domain TM1870 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TM1872 PF01894 Uncharacterised protein family UPF0047 TM1873 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TM1873 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TM1874 PF00313 'Cold-shock' DNA-binding domain TM1875 PF00749 tRNA synthetases class I (E and Q), catalytic domain TM1876 PF12850 Calcineurin-like phosphoesterase superfamily domain TM1877 PF04055 Radical SAM superfamily TM1878 PF00149 Calcineurin-like phosphoesterase TM1878 PF02872 5'-nucleotidase, C-terminal domain