locus-tag class description THMA_RS00010 PF13378 Enolase C-terminal domain-like THMA_RS00010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain THMA_RS00020 PF04199 Putative cyclase THMA_RS00030 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THMA_RS00030 PF00037 4Fe-4S binding domain THMA_RS00030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THMA_RS00050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMA_RS00055 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase THMA_RS00065 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II THMA_RS00065 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg THMA_RS00070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THMA_RS00080 PF02537 CrcB-like protein, Camphor Resistance (CrcB) THMA_RS00085 PF02641 Uncharacterized ACR, COG1993 THMA_RS00090 PF01119 DNA mismatch repair protein, C-terminal domain THMA_RS00090 PF08676 MutL C terminal dimerisation domain THMA_RS00095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMA_RS00100 PF00722 Glycosyl hydrolases family 16 THMA_RS00105 PF01915 Glycosyl hydrolase family 3 C-terminal domain THMA_RS00105 PF00933 Glycosyl hydrolase family 3 N terminal domain THMA_RS00105 PF14310 Fibronectin type III-like domain THMA_RS00115 PF00005 ABC transporter THMA_RS00115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS00120 PF00005 ABC transporter THMA_RS00120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS00130 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS00135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMA_RS00140 PF00480 ROK family THMA_RS00160 PF03266 NTPase THMA_RS00165 PF01966 HD domain THMA_RS00170 PF01242 6-pyruvoyl tetrahydropterin synthase THMA_RS00175 PF02649 Type I GTP cyclohydrolase folE2 THMA_RS00180 PF00809 Pterin binding enzyme THMA_RS00185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) THMA_RS00185 PF02152 Dihydroneopterin aldolase THMA_RS00190 PF00557 Metallopeptidase family M24 THMA_RS00190 PF01321 Creatinase/Prolidase N-terminal domain THMA_RS00195 PF00664 ABC transporter transmembrane region THMA_RS00195 PF00005 ABC transporter THMA_RS00215 PF12323 Helix-turn-helix domain THMA_RS00215 PF01385 Probable transposase THMA_RS00215 PF07282 Putative transposase DNA-binding domain THMA_RS00225 PF04015 Domain of unknown function (DUF362) THMA_RS00235 PF07670 Nucleoside recognition THMA_RS00235 PF02421 Ferrous iron transport protein B THMA_RS00235 PF17910 FeoB cytosolic helical domain THMA_RS00235 PF07664 Ferrous iron transport protein B C terminus THMA_RS00235 PF04023 FeoA domain THMA_RS00255 PF07488 Glycosyl hydrolase family 67 middle domain THMA_RS00255 PF03648 Glycosyl hydrolase family 67 N-terminus THMA_RS00255 PF07477 Glycosyl hydrolase family 67 C-terminus THMA_RS00260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMA_RS00265 PF00005 ABC transporter THMA_RS00265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS00270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS00270 PF00005 ABC transporter THMA_RS00275 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS00275 PF12911 N-terminal TM domain of oligopeptide transport permease C THMA_RS00280 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS00285 PF00331 Glycosyl hydrolase family 10 THMA_RS00285 PF02018 Carbohydrate binding domain THMA_RS00285 PF06452 Carbohydrate family 9 binding domain-like THMA_RS00300 PF02614 Glucuronate isomerase THMA_RS00305 PF09339 IclR helix-turn-helix domain THMA_RS00305 PF01614 Bacterial transcriptional regulator THMA_RS00310 PF01081 KDPG and KHG aldolase THMA_RS00320 PF01232 Mannitol dehydrogenase Rossmann domain THMA_RS00320 PF08125 Mannitol dehydrogenase C-terminal domain THMA_RS00325 PF03786 D-mannonate dehydratase (UxuA) THMA_RS00330 PF00331 Glycosyl hydrolase family 10 THMA_RS00335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMA_RS00340 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS00345 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS00345 PF12911 N-terminal TM domain of oligopeptide transport permease C THMA_RS00350 PF00005 ABC transporter THMA_RS00350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS00355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS00355 PF00005 ABC transporter THMA_RS00360 PF14310 Fibronectin type III-like domain THMA_RS00360 PF01915 Glycosyl hydrolase family 3 C-terminal domain THMA_RS00360 PF00933 Glycosyl hydrolase family 3 N terminal domain THMA_RS00365 PF05448 Acetyl xylan esterase (AXE1) THMA_RS00370 PF00005 ABC transporter THMA_RS00375 PF01032 FecCD transport family THMA_RS00380 PF01497 Periplasmic binding protein THMA_RS00385 PF02623 FliW protein THMA_RS00390 PF00669 Bacterial flagellin N-terminal helical region THMA_RS00395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMA_RS00395 PF07196 Flagellin hook IN motif THMA_RS00410 PF03023 Lipid II flippase MurJ THMA_RS00415 PF01875 Memo-like protein THMA_RS00420 PF03958 Bacterial type II/III secretion system short domain THMA_RS00420 PF11741 AMIN domain THMA_RS00420 PF07660 Secretin and TonB N terminus short domain THMA_RS00420 PF00263 Bacterial type II and III secretion system protein THMA_RS00450 PF00482 Type II secretion system (T2SS), protein F THMA_RS00455 PF02915 Rubrerythrin THMA_RS00460 PF01207 Dihydrouridine synthase (Dus) THMA_RS00465 PF01467 Cytidylyltransferase-like THMA_RS00470 PF01018 GTP1/OBG THMA_RS00470 PF01926 50S ribosome-binding GTPase THMA_RS00470 PF09269 Domain of unknown function (DUF1967) THMA_RS00480 PF01653 NAD-dependent DNA ligase adenylation domain THMA_RS00480 PF00533 BRCA1 C Terminus (BRCT) domain THMA_RS00480 PF03120 NAD-dependent DNA ligase OB-fold domain THMA_RS00480 PF03119 NAD-dependent DNA ligase C4 zinc finger domain THMA_RS00480 PF12826 Helix-hairpin-helix motif THMA_RS00520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THMA_RS00530 PF00480 ROK family THMA_RS00530 PF01325 Iron dependent repressor, N-terminal DNA binding domain THMA_RS00535 PF00465 Iron-containing alcohol dehydrogenase THMA_RS00540 PF02653 Branched-chain amino acid transport system / permease component THMA_RS00545 PF01522 Polysaccharide deacetylase THMA_RS00555 PF00005 ABC transporter THMA_RS00560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THMA_RS00560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THMA_RS00570 PF00317 Ribonucleotide reductase, all-alpha domain THMA_RS00570 PF02867 Ribonucleotide reductase, barrel domain THMA_RS00570 PF03477 ATP cone domain THMA_RS00580 PF00881 Nitroreductase family THMA_RS00595 PF01297 Zinc-uptake complex component A periplasmic THMA_RS00600 PF00005 ABC transporter THMA_RS00605 PF00950 ABC 3 transport family THMA_RS00610 PF00072 Response regulator receiver domain THMA_RS00610 PF00486 Transcriptional regulatory protein, C terminal THMA_RS00620 PF00364 Biotin-requiring enzyme THMA_RS00620 PF00682 HMGL-like THMA_RS00620 PF02436 Conserved carboxylase domain THMA_RS00630 PF07690 Major Facilitator Superfamily THMA_RS00635 PF00700 Bacterial flagellin C-terminal helical region THMA_RS00635 PF00669 Bacterial flagellin N-terminal helical region THMA_RS00640 PF00857 Isochorismatase family THMA_RS00645 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMA_RS00655 PF04055 Radical SAM superfamily THMA_RS00660 PF00290 Tryptophan synthase alpha chain THMA_RS00665 PF00291 Pyridoxal-phosphate dependent enzyme THMA_RS00670 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase THMA_RS00675 PF00218 Indole-3-glycerol phosphate synthase THMA_RS00680 PF00591 Glycosyl transferase family, a/b domain THMA_RS00680 PF02885 Glycosyl transferase family, helical bundle domain THMA_RS00680 PF00117 Glutamine amidotransferase class-I THMA_RS00685 PF00425 chorismate binding enzyme THMA_RS00685 PF04715 Anthranilate synthase component I, N terminal region THMA_RS00690 PF00990 Diguanylate cyclase, GGDEF domain THMA_RS00690 PF00072 Response regulator receiver domain THMA_RS00705 PF00814 Glycoprotease family THMA_RS00710 PF07724 AAA domain (Cdc48 subfamily) THMA_RS00710 PF06689 ClpX C4-type zinc finger THMA_RS00710 PF10431 C-terminal, D2-small domain, of ClpB protein THMA_RS00720 PF01380 SIS domain THMA_RS00725 PF02504 Fatty acid synthesis protein THMA_RS00730 PF01783 Ribosomal L32p protein family THMA_RS00750 PF01817 Chorismate mutase type II THMA_RS00750 PF00800 Prephenate dehydratase THMA_RS00750 PF01842 ACT domain THMA_RS00755 PF00245 Alkaline phosphatase THMA_RS00770 PF01790 Prolipoprotein diacylglyceryl transferase THMA_RS00775 PF01725 Ham1 family THMA_RS00785 PF00348 Polyprenyl synthetase THMA_RS00805 PF07499 RuvA, C-terminal domain THMA_RS00805 PF01330 RuvA N terminal domain THMA_RS00810 PF08245 Mur ligase middle domain THMA_RS00810 PF02875 Mur ligase family, glutamate ligase domain THMA_RS00815 PF01676 Metalloenzyme superfamily THMA_RS00820 PF08264 Anticodon-binding domain of tRNA THMA_RS00820 PF00133 tRNA synthetases class I (I, L, M and V) THMA_RS00820 PF13603 Leucyl-tRNA synthetase, Domain 2 THMA_RS00820 PF09334 tRNA synthetases class I (M) THMA_RS00825 PF06971 Putative DNA-binding protein N-terminus THMA_RS00825 PF02629 CoA binding domain THMA_RS00840 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain THMA_RS00840 PF05221 S-adenosyl-L-homocysteine hydrolase THMA_RS00845 PF17915 Reverse gyrase zinc finger THMA_RS00845 PF01131 DNA topoisomerase THMA_RS00845 PF01751 Toprim domain THMA_RS00845 PF00270 DEAD/DEAH box helicase THMA_RS00850 PF03030 Inorganic H+ pyrophosphatase THMA_RS00855 PF00550 Phosphopantetheine attachment site THMA_RS00865 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 THMA_RS00865 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) THMA_RS00870 PF18319 PriA DNA helicase Cys-rich region (CRR) domain THMA_RS00870 PF17764 3′ DNA-binding domain (3′BD) THMA_RS00870 PF18074 Primosomal protein N C-terminal domain THMA_RS00870 PF04851 Type III restriction enzyme, res subunit THMA_RS00915 PF00919 Uncharacterized protein family UPF0004 THMA_RS00915 PF01938 TRAM domain THMA_RS00915 PF04055 Radical SAM superfamily THMA_RS00920 PF02540 NAD synthase THMA_RS00920 PF00795 Carbon-nitrogen hydrolase THMA_RS00925 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THMA_RS00925 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THMA_RS00925 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THMA_RS00925 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THMA_RS00935 PF01966 HD domain THMA_RS00935 PF00072 Response regulator receiver domain THMA_RS00940 PF00512 His Kinase A (phospho-acceptor) domain THMA_RS00940 PF09308 LuxQ, periplasmic THMA_RS00940 PF00072 Response regulator receiver domain THMA_RS00940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMA_RS00950 PF01980 tRNA-methyltransferase O THMA_RS00960 PF01032 FecCD transport family THMA_RS00965 PF00005 ABC transporter THMA_RS00970 PF04232 Stage V sporulation protein S (SpoVS) THMA_RS00995 PF03649 Uncharacterised protein family (UPF0014) THMA_RS01000 PF00005 ABC transporter THMA_RS01020 PF01171 PP-loop family THMA_RS01025 PF00004 ATPase family associated with various cellular activities (AAA) THMA_RS01025 PF07724 AAA domain (Cdc48 subfamily) THMA_RS01025 PF17871 AAA lid domain THMA_RS01025 PF02861 Clp amino terminal domain, pathogenicity island component THMA_RS01025 PF10431 C-terminal, D2-small domain, of ClpB protein THMA_RS01030 PF18073 Rubredoxin metal binding domain THMA_RS01035 PF00633 Helix-hairpin-helix motif THMA_RS01035 PF10635 DisA bacterial checkpoint controller linker region THMA_RS01035 PF02457 DisA bacterial checkpoint controller nucleotide-binding THMA_RS01040 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THMA_RS01040 PF00037 4Fe-4S binding domain THMA_RS01040 PF02256 Iron hydrogenase small subunit THMA_RS01040 PF02906 Iron only hydrogenase large subunit, C-terminal domain THMA_RS01055 PF00005 ABC transporter THMA_RS01060 PF00270 DEAD/DEAH box helicase THMA_RS01060 PF00271 Helicase conserved C-terminal domain THMA_RS01060 PF17191 RecG wedge domain THMA_RS01075 PF02887 Pyruvate kinase, alpha/beta domain THMA_RS01075 PF00224 Pyruvate kinase, barrel domain THMA_RS01080 PF00365 Phosphofructokinase THMA_RS01090 PF01571 Aminomethyltransferase folate-binding domain THMA_RS01090 PF08669 Glycine cleavage T-protein C-terminal barrel domain THMA_RS01095 PF01597 Glycine cleavage H-protein THMA_RS01100 PF02347 Glycine cleavage system P-protein THMA_RS01105 PF02347 Glycine cleavage system P-protein THMA_RS01110 PF01042 Endoribonuclease L-PSP THMA_RS01115 PF02091 Glycyl-tRNA synthetase alpha subunit THMA_RS01120 PF05746 DALR anticodon binding domain THMA_RS01120 PF02092 Glycyl-tRNA synthetase beta subunit THMA_RS01125 PF18269 T3SS EscN ATPase C-terminal domain THMA_RS01125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMA_RS01125 PF02874 ATP synthase alpha/beta family, beta-barrel domain THMA_RS01130 PF02108 Flagellar assembly protein FliH THMA_RS01135 PF14841 FliG middle domain THMA_RS01135 PF14842 FliG N-terminal domain THMA_RS01135 PF01706 FliG C-terminal domain THMA_RS01140 PF08345 Flagellar M-ring protein C-terminal THMA_RS01140 PF01514 Secretory protein of YscJ/FliF family THMA_RS01145 PF00005 ABC transporter THMA_RS01155 PF08279 HTH domain THMA_RS01155 PF03099 Biotin/lipoate A/B protein ligase family THMA_RS01155 PF02237 Biotin protein ligase C terminal domain THMA_RS01160 PF00291 Pyridoxal-phosphate dependent enzyme THMA_RS01175 PF00037 4Fe-4S binding domain THMA_RS01175 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THMA_RS01175 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THMA_RS01190 PF08245 Mur ligase middle domain THMA_RS01190 PF01225 Mur ligase family, catalytic domain THMA_RS01190 PF02875 Mur ligase family, glutamate ligase domain THMA_RS01195 PF03033 Glycosyltransferase family 28 N-terminal domain THMA_RS01195 PF04101 Glycosyltransferase family 28 C-terminal domain THMA_RS01200 PF01098 Cell cycle protein THMA_RS01205 PF08245 Mur ligase middle domain THMA_RS01210 PF00953 Glycosyl transferase family 4 THMA_RS01210 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 THMA_RS01215 PF08245 Mur ligase middle domain THMA_RS01215 PF01225 Mur ligase family, catalytic domain THMA_RS01215 PF02875 Mur ligase family, glutamate ligase domain THMA_RS01220 PF02875 Mur ligase family, glutamate ligase domain THMA_RS01220 PF01225 Mur ligase family, catalytic domain THMA_RS01220 PF08245 Mur ligase middle domain THMA_RS01230 PF00132 Bacterial transferase hexapeptide (six repeats) THMA_RS01230 PF00483 Nucleotidyl transferase THMA_RS01235 PF00483 Nucleotidyl transferase THMA_RS01235 PF00132 Bacterial transferase hexapeptide (six repeats) THMA_RS01250 PF04055 Radical SAM superfamily THMA_RS01250 PF06968 Biotin and Thiamin Synthesis associated domain THMA_RS01255 PF10531 SLBB domain THMA_RS01255 PF13375 RnfC Barrel sandwich hybrid domain THMA_RS01255 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THMA_RS01255 PF13237 4Fe-4S dicluster domain THMA_RS01260 PF03116 NQR2, RnfD, RnfE family THMA_RS01270 PF02508 Rnf-Nqr subunit, membrane protein THMA_RS01275 PF02508 Rnf-Nqr subunit, membrane protein THMA_RS01280 PF13187 4Fe-4S dicluster domain THMA_RS01280 PF04060 Putative Fe-S cluster THMA_RS01285 PF18255 DNA processing protein A sterile alpha motif domain THMA_RS01285 PF02481 DNA recombination-mediator protein A THMA_RS01290 PF02599 Global regulator protein family THMA_RS01295 PF02686 Glu-tRNAGln amidotransferase C subunit THMA_RS01300 PF02021 Uncharacterised protein family UPF0102 THMA_RS01305 PF01668 SmpB protein THMA_RS01310 PF00830 Ribosomal L28 family THMA_RS01320 PF01336 OB-fold nucleic acid binding domain THMA_RS01320 PF01966 HD domain THMA_RS01325 PF01751 Toprim domain THMA_RS01325 PF01131 DNA topoisomerase THMA_RS01330 PF07478 D-ala D-ala ligase C-terminus THMA_RS01330 PF01820 D-ala D-ala ligase N-terminus THMA_RS01340 PF01384 Phosphate transporter family THMA_RS01345 PF00712 DNA polymerase III beta subunit, N-terminal domain THMA_RS01345 PF02767 DNA polymerase III beta subunit, central domain THMA_RS01345 PF02768 DNA polymerase III beta subunit, C-terminal domain THMA_RS01350 PF01134 Glucose inhibited division protein A THMA_RS01350 PF13932 GidA associated domain THMA_RS01355 PF01479 S4 domain THMA_RS01355 PF00849 RNA pseudouridylate synthase THMA_RS01360 PF01541 GIY-YIG catalytic domain THMA_RS01360 PF08459 UvrC Helix-hairpin-helix N-terminal THMA_RS01360 PF02151 UvrB/uvrC motif THMA_RS01365 PF00216 Bacterial DNA-binding protein THMA_RS01370 PF01926 50S ribosome-binding GTPase THMA_RS01370 PF10396 GTP-binding protein TrmE N-terminus THMA_RS01370 PF12631 MnmE helical domain THMA_RS01375 PF02574 Homocysteine S-methyltransferase THMA_RS01375 PF00809 Pterin binding enzyme THMA_RS01375 PF02310 B12 binding domain THMA_RS01375 PF02607 B12 binding domain THMA_RS01375 PF02965 Vitamin B12 dependent methionine synthase, activation domain THMA_RS01385 PF02219 Methylenetetrahydrofolate reductase THMA_RS01385 PF02574 Homocysteine S-methyltransferase THMA_RS01395 PF02896 PEP-utilising enzyme, TIM barrel domain THMA_RS01395 PF00391 PEP-utilising enzyme, mobile domain THMA_RS01395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain THMA_RS01400 PF01116 Fructose-bisphosphate aldolase class-II THMA_RS01405 PF00871 Acetokinase family THMA_RS01410 PF00392 Bacterial regulatory proteins, gntR family THMA_RS01415 PF11762 L-arabinose isomerase C-terminal domain THMA_RS01415 PF02610 L-arabinose isomerase THMA_RS01425 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS01430 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS01440 PF06964 Alpha-L-arabinofuranosidase C-terminal domain THMA_RS01445 PF01263 Aldose 1-epimerase THMA_RS01450 PF00596 Class II Aldolase and Adducin N-terminal domain THMA_RS01455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THMA_RS01455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THMA_RS01460 PF13685 Iron-containing alcohol dehydrogenase THMA_RS01470 PF00005 ABC transporter THMA_RS01470 PF00664 ABC transporter transmembrane region THMA_RS01475 PF00664 ABC transporter transmembrane region THMA_RS01475 PF00005 ABC transporter THMA_RS01480 PF00365 Phosphofructokinase THMA_RS01485 PF00285 Citrate synthase, C-terminal domain THMA_RS01490 PF00330 Aconitase family (aconitate hydratase) THMA_RS01495 PF00694 Aconitase C-terminal domain THMA_RS01500 PF00171 Aldehyde dehydrogenase family THMA_RS01505 PF00696 Amino acid kinase family THMA_RS01505 PF01472 PUA domain THMA_RS01510 PF00923 Transaldolase/Fructose-6-phosphate aldolase THMA_RS01515 PF00294 pfkB family carbohydrate kinase THMA_RS01525 PF08240 Alcohol dehydrogenase GroES-like domain THMA_RS01525 PF16912 Glucose dehydrogenase C-terminus THMA_RS01530 PF00356 Bacterial regulatory proteins, lacI family THMA_RS01540 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS01545 PF12911 N-terminal TM domain of oligopeptide transport permease C THMA_RS01545 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS01550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS01550 PF00005 ABC transporter THMA_RS01555 PF00005 ABC transporter THMA_RS01555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS01560 PF03442 Carbohydrate binding domain X2 THMA_RS01560 PF00942 Cellulose binding domain THMA_RS01575 PF01055 Glycosyl hydrolases family 31 THMA_RS01575 PF13802 Galactose mutarotase-like THMA_RS01580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMA_RS01585 PF08532 Beta-galactosidase trimerisation domain THMA_RS01585 PF02449 Beta-galactosidase THMA_RS01585 PF08533 Beta-galactosidase C-terminal domain THMA_RS01595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain THMA_RS01595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THMA_RS01600 PF00248 Aldo/keto reductase family THMA_RS01620 PF00403 Heavy-metal-associated domain THMA_RS01625 PF01209 ubiE/COQ5 methyltransferase family THMA_RS01645 PF03480 Bacterial extracellular solute-binding protein, family 7 THMA_RS01655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component THMA_RS01665 PF01380 SIS domain THMA_RS01665 PF01418 Helix-turn-helix domain, rpiR family THMA_RS01670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THMA_RS01670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THMA_RS01680 PF01555 DNA methylase THMA_RS01690 PF07969 Amidohydrolase family THMA_RS01695 PF00156 Phosphoribosyl transferase domain THMA_RS01700 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family THMA_RS01705 PF01180 Dihydroorotate dehydrogenase THMA_RS01710 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B THMA_RS01720 PF12146 Serine aminopeptidase, S33 THMA_RS01720 PF13026 Protein of unknown function (DUF3887) THMA_RS01725 PF04055 Radical SAM superfamily THMA_RS01725 PF08497 Radical SAM N-terminal THMA_RS01755 PF18152 DAHP synthase ferredoxin-like domain THMA_RS01755 PF00793 DAHP synthetase I family THMA_RS01765 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THMA_RS01770 PF08501 Shikimate dehydrogenase substrate binding domain THMA_RS01770 PF01488 Shikimate / quinate 5-dehydrogenase THMA_RS01775 PF01264 Chorismate synthase THMA_RS01780 PF01761 3-dehydroquinate synthase THMA_RS01780 PF01202 Shikimate kinase THMA_RS01785 PF01220 Dehydroquinase class II THMA_RS01795 PF12704 MacB-like periplasmic core domain THMA_RS01795 PF00005 ABC transporter THMA_RS01795 PF02687 FtsX-like permease family THMA_RS01800 PF00005 ABC transporter THMA_RS01805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THMA_RS01820 PF13291 ACT domain THMA_RS01820 PF00291 Pyridoxal-phosphate dependent enzyme THMA_RS01830 PF00781 Diacylglycerol kinase catalytic domain THMA_RS01840 PF03819 MazG nucleotide pyrophosphohydrolase domain THMA_RS01850 PF01261 Xylose isomerase-like TIM barrel THMA_RS01855 PF05670 NFACT protein RNA binding domain THMA_RS01860 PF09178 Domain of unknown function (DUF1945) THMA_RS01860 PF00128 Alpha amylase, catalytic domain THMA_RS01865 PF02127 Aminopeptidase I zinc metalloprotease (M18) THMA_RS01870 PF00633 Helix-hairpin-helix motif THMA_RS01870 PF10576 Iron-sulfur binding domain of endonuclease III THMA_RS01870 PF00730 HhH-GPD superfamily base excision DNA repair protein THMA_RS01890 PF06745 KaiC THMA_RS01895 PF02863 Arginine repressor, C-terminal domain THMA_RS01895 PF01316 Arginine repressor, DNA binding domain THMA_RS01900 PF00873 AcrB/AcrD/AcrF family THMA_RS01905 PF00012 Hsp70 protein THMA_RS01910 PF00011 Hsp20/alpha crystallin family THMA_RS01915 PF06130 Phosphate propanoyltransferase THMA_RS01920 PF01925 Sulfite exporter TauE/SafE THMA_RS01925 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus THMA_RS01925 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus THMA_RS01930 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMA_RS01930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THMA_RS01940 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMA_RS01940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THMA_RS01945 PF00730 HhH-GPD superfamily base excision DNA repair protein THMA_RS01945 PF00633 Helix-hairpin-helix motif THMA_RS01945 PF14815 NUDIX domain THMA_RS01950 PF00881 Nitroreductase family THMA_RS01960 PF13597 Anaerobic ribonucleoside-triphosphate reductase THMA_RS01960 PF03477 ATP cone domain THMA_RS01965 PF00881 Nitroreductase family THMA_RS01980 PF00005 ABC transporter THMA_RS01985 PF00534 Glycosyl transferases group 1 THMA_RS02005 PF13247 4Fe-4S dicluster domain THMA_RS02005 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THMA_RS02005 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMA_RS02010 PF01645 Conserved region in glutamate synthase THMA_RS02010 PF13187 4Fe-4S dicluster domain THMA_RS02015 PF00310 Glutamine amidotransferases class-II THMA_RS02025 PF00486 Transcriptional regulatory protein, C terminal THMA_RS02025 PF00072 Response regulator receiver domain THMA_RS02030 PF00512 His Kinase A (phospho-acceptor) domain THMA_RS02030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMA_RS02030 PF00672 HAMP domain THMA_RS02035 PF00265 Thymidine kinase THMA_RS02040 PF00909 Ammonium Transporter Family THMA_RS02045 PF00543 Nitrogen regulatory protein P-II THMA_RS02055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THMA_RS02070 PF01339 CheB methylesterase THMA_RS02070 PF00072 Response regulator receiver domain THMA_RS02075 PF01551 Peptidase family M23 THMA_RS02075 PF04225 Opacity-associated protein A LysM-like domain THMA_RS02085 PF00480 ROK family THMA_RS02085 PF01047 MarR family THMA_RS02090 PF08240 Alcohol dehydrogenase GroES-like domain THMA_RS02090 PF00107 Zinc-binding dehydrogenase THMA_RS02095 PF02633 Creatinine amidohydrolase THMA_RS02100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THMA_RS02100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain THMA_RS02110 PF01261 Xylose isomerase-like TIM barrel THMA_RS02115 PF03239 Iron permease FTR1 family THMA_RS02125 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS02130 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS02135 PF03459 TOBE domain THMA_RS02135 PF00005 ABC transporter THMA_RS02135 PF17912 MalK OB fold domain THMA_RS02145 PF00465 Iron-containing alcohol dehydrogenase THMA_RS02170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family THMA_RS02175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMA_RS02180 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS02185 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS02195 PF00544 Pectate lyase THMA_RS02200 PF02056 Family 4 glycosyl hydrolase THMA_RS02200 PF11975 Family 4 glycosyl hydrolase C-terminal domain THMA_RS02210 PF08240 Alcohol dehydrogenase GroES-like domain THMA_RS02210 PF00107 Zinc-binding dehydrogenase THMA_RS02215 PF00295 Glycosyl hydrolases family 28 THMA_RS02220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase THMA_RS02220 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain THMA_RS02225 PF07729 FCD domain THMA_RS02225 PF00392 Bacterial regulatory proteins, gntR family THMA_RS02245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THMA_RS02245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THMA_RS02250 PF10415 Fumarase C C-terminus THMA_RS02250 PF00206 Lyase THMA_RS02255 PF12631 MnmE helical domain THMA_RS02255 PF10396 GTP-binding protein TrmE N-terminus THMA_RS02255 PF01926 50S ribosome-binding GTPase THMA_RS02260 PF00731 AIR carboxylase THMA_RS02265 PF02222 ATP-grasp domain THMA_RS02265 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain THMA_RS02270 PF07244 Surface antigen variable number repeat THMA_RS02270 PF01103 Surface antigen THMA_RS02275 PF02511 Thymidylate synthase complementing protein THMA_RS02300 PF00471 Ribosomal protein L33 THMA_RS02310 PF00584 SecE/Sec61-gamma subunits of protein translocation complex THMA_RS02315 PF18298 NusG additional domain THMA_RS02315 PF00467 KOW motif THMA_RS02315 PF02357 Transcription termination factor nusG THMA_RS02320 PF00298 Ribosomal protein L11, RNA binding domain THMA_RS02320 PF03946 Ribosomal protein L11, N-terminal domain THMA_RS02325 PF00687 Ribosomal protein L1p/L10e family THMA_RS02330 PF00466 Ribosomal protein L10 THMA_RS02335 PF16320 Ribosomal protein L7/L12 dimerisation domain THMA_RS02335 PF00542 Ribosomal protein L7/L12 C-terminal domain THMA_RS02340 PF04560 RNA polymerase Rpb2, domain 7 THMA_RS02340 PF00562 RNA polymerase Rpb2, domain 6 THMA_RS02340 PF10385 RNA polymerase beta subunit external 1 domain THMA_RS02340 PF04563 RNA polymerase beta subunit THMA_RS02340 PF04565 RNA polymerase Rpb2, domain 3 THMA_RS02345 PF04997 RNA polymerase Rpb1, domain 1 THMA_RS02345 PF00623 RNA polymerase Rpb1, domain 2 THMA_RS02345 PF04998 RNA polymerase Rpb1, domain 5 THMA_RS02345 PF04983 RNA polymerase Rpb1, domain 3 THMA_RS02345 PF05000 RNA polymerase Rpb1, domain 4 THMA_RS02350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMA_RS02355 PF14579 Helix-hairpin-helix motif THMA_RS02355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THMA_RS02355 PF07733 Bacterial DNA polymerase III alpha NTPase domain THMA_RS02360 PF01479 S4 domain THMA_RS02360 PF00849 RNA pseudouridylate synthase THMA_RS02365 PF03705 CheR methyltransferase, all-alpha domain THMA_RS02365 PF01739 CheR methyltransferase, SAM binding domain THMA_RS02375 PF01709 Transcriptional regulator THMA_RS02385 PF00072 Response regulator receiver domain THMA_RS02385 PF00486 Transcriptional regulatory protein, C terminal THMA_RS02405 PF01174 SNO glutamine amidotransferase family THMA_RS02410 PF01680 SOR/SNZ family THMA_RS02420 PF00857 Isochorismatase family THMA_RS02435 PF00395 S-layer homology domain THMA_RS02440 PF00579 tRNA synthetases class I (W and Y) THMA_RS02440 PF01479 S4 domain THMA_RS02450 PF00005 ABC transporter THMA_RS02450 PF17760 UvrA interaction domain THMA_RS02450 PF17755 UvrA DNA-binding domain THMA_RS02480 PF00005 ABC transporter THMA_RS02490 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS02495 PF01910 Thiamine-binding protein THMA_RS02500 PF01883 Iron-sulfur cluster assembly protein THMA_RS02505 PF05175 Methyltransferase small domain THMA_RS02505 PF17827 PrmC N-terminal domain THMA_RS02515 PF02146 Sir2 family THMA_RS02525 PF00579 tRNA synthetases class I (W and Y) THMA_RS02530 PF02616 Segregation and condensation protein ScpA THMA_RS02535 PF04079 Segregation and condensation complex subunit ScpB THMA_RS02540 PF02562 PhoH-like protein THMA_RS02540 PF13638 PIN domain THMA_RS02545 PF01336 OB-fold nucleic acid binding domain THMA_RS02545 PF00929 Exonuclease THMA_RS02545 PF14579 Helix-hairpin-helix motif THMA_RS02545 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THMA_RS02545 PF11490 DNA polymerase III polC-type N-terminus II THMA_RS02545 PF07733 Bacterial DNA polymerase III alpha NTPase domain THMA_RS02545 PF02811 PHP domain THMA_RS02555 PF00005 ABC transporter THMA_RS02555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS02565 PF00005 ABC transporter THMA_RS02565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS02570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS02570 PF00005 ABC transporter THMA_RS02575 PF12911 N-terminal TM domain of oligopeptide transport permease C THMA_RS02575 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS02580 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS02585 PF00166 Chaperonin 10 Kd subunit THMA_RS02590 PF00118 TCP-1/cpn60 chaperonin family THMA_RS02600 PF05496 Holliday junction DNA helicase RuvB P-loop domain THMA_RS02600 PF16193 AAA C-terminal domain THMA_RS02600 PF01661 Macro domain THMA_RS02600 PF12002 MgsA AAA+ ATPase C terminal THMA_RS02605 PF16363 GDP-mannose 4,6 dehydratase THMA_RS02615 PF03167 Uracil DNA glycosylase superfamily THMA_RS02625 PF01078 Magnesium chelatase, subunit ChlI THMA_RS02625 PF13335 Magnesium chelatase, subunit ChlI C-terminal THMA_RS02630 PF03129 Anticodon binding domain THMA_RS02630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THMA_RS02630 PF04073 Aminoacyl-tRNA editing domain THMA_RS02635 PF04055 Radical SAM superfamily THMA_RS02635 PF16199 Radical_SAM C-terminal domain THMA_RS02665 PF00227 Proteasome subunit THMA_RS02670 PF10431 C-terminal, D2-small domain, of ClpB protein THMA_RS02670 PF00004 ATPase family associated with various cellular activities (AAA) THMA_RS02670 PF07724 AAA domain (Cdc48 subfamily) THMA_RS02695 PF17209 Hfq protein THMA_RS02700 PF16360 GTP-binding GTPase Middle Region THMA_RS02700 PF13167 GTP-binding GTPase N-terminal THMA_RS02700 PF01926 50S ribosome-binding GTPase THMA_RS02705 PF02911 Formyl transferase, C-terminal domain THMA_RS02705 PF00551 Formyl transferase THMA_RS02710 PF00403 Heavy-metal-associated domain THMA_RS02715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS02715 PF00005 ABC transporter THMA_RS02720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMA_RS02725 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS02730 PF12911 N-terminal TM domain of oligopeptide transport permease C THMA_RS02730 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS02735 PF04542 Sigma-70 region 2 THMA_RS02735 PF03979 Sigma-70 factor, region 1.1 THMA_RS02735 PF00140 Sigma-70 factor, region 1.2 THMA_RS02735 PF04539 Sigma-70 region 3 THMA_RS02735 PF04545 Sigma-70, region 4 THMA_RS02750 PF13514 AAA domain THMA_RS02755 PF01545 Cation efflux family THMA_RS02760 PF00291 Pyridoxal-phosphate dependent enzyme THMA_RS02770 PF05681 Fumarate hydratase (Fumerase) THMA_RS02770 PF05683 Fumarase C-terminus THMA_RS02775 PF00390 Malic enzyme, N-terminal domain THMA_RS02775 PF03949 Malic enzyme, NAD binding domain THMA_RS02785 PF00005 ABC transporter THMA_RS02790 PF00288 GHMP kinases N terminal domain THMA_RS02795 PF00291 Pyridoxal-phosphate dependent enzyme THMA_RS02800 PF13840 ACT domain THMA_RS02800 PF01842 ACT domain THMA_RS02800 PF00696 Amino acid kinase family THMA_RS02805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THMA_RS02805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THMA_RS02805 PF00205 Thiamine pyrophosphate enzyme, central domain THMA_RS02810 PF10369 Small subunit of acetolactate synthase THMA_RS02815 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain THMA_RS02815 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain THMA_RS02820 PF00920 Dehydratase family THMA_RS02825 PF08502 LeuA allosteric (dimerisation) domain THMA_RS02825 PF00682 HMGL-like THMA_RS02830 PF08502 LeuA allosteric (dimerisation) domain THMA_RS02830 PF00682 HMGL-like THMA_RS02835 PF00330 Aconitase family (aconitate hydratase) THMA_RS02840 PF00694 Aconitase C-terminal domain THMA_RS02845 PF00180 Isocitrate/isopropylmalate dehydrogenase THMA_RS02850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THMA_RS02850 PF02142 MGS-like domain THMA_RS02850 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain THMA_RS02855 PF00117 Glutamine amidotransferase class-I THMA_RS02855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain THMA_RS02870 PF01544 CorA-like Mg2+ transporter protein THMA_RS02895 PF17746 SfsA N-terminal OB domain THMA_RS02895 PF03749 Sugar fermentation stimulation protein RE domain THMA_RS02905 PF02082 Transcriptional regulator THMA_RS02920 PF00448 SRP54-type protein, GTPase domain THMA_RS02920 PF02881 SRP54-type protein, helical bundle domain THMA_RS02925 PF13180 PDZ domain THMA_RS02925 PF17820 PDZ domain THMA_RS02930 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THMA_RS02935 PF00795 Carbon-nitrogen hydrolase THMA_RS02940 PF02547 Queuosine biosynthesis protein THMA_RS02945 PF02075 Crossover junction endodeoxyribonuclease RuvC THMA_RS02950 PF02811 PHP domain THMA_RS02950 PF00929 Exonuclease THMA_RS02950 PF07733 Bacterial DNA polymerase III alpha NTPase domain THMA_RS02950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THMA_RS02950 PF14579 Helix-hairpin-helix motif THMA_RS02955 PF00583 Acetyltransferase (GNAT) family THMA_RS02960 PF03807 NADP oxidoreductase coenzyme F420-dependent THMA_RS02960 PF14748 Pyrroline-5-carboxylate reductase dimerisation THMA_RS02970 PF11734 TilS substrate C-terminal domain THMA_RS02970 PF01171 PP-loop family THMA_RS02975 PF01434 Peptidase family M41 THMA_RS02975 PF06480 FtsH Extracellular THMA_RS02975 PF17862 AAA+ lid domain THMA_RS02975 PF00004 ATPase family associated with various cellular activities (AAA) THMA_RS02990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THMA_RS02990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain THMA_RS02990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain THMA_RS03000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THMA_RS03000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain THMA_RS03005 PF00892 EamA-like transporter family THMA_RS03010 PF01368 DHH family THMA_RS03010 PF02833 DHHA2 domain THMA_RS03010 PF00571 CBS domain THMA_RS03010 PF07085 DRTGG domain THMA_RS03030 PF03717 Penicillin-binding Protein dimerisation domain THMA_RS03030 PF00905 Penicillin binding protein transpeptidase domain THMA_RS03035 PF00005 ABC transporter THMA_RS03050 PF00860 Permease family THMA_RS03060 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS03095 PF01250 Ribosomal protein S6 THMA_RS03100 PF00436 Single-strand binding protein family THMA_RS03105 PF01084 Ribosomal protein S18 THMA_RS03115 PF16123 Hydroxyacylglutathione hydrolase C-terminus THMA_RS03115 PF00753 Metallo-beta-lactamase superfamily THMA_RS03130 PF02350 UDP-N-acetylglucosamine 2-epimerase THMA_RS03170 PF13195 Protein of unknown function (DUF4011) THMA_RS03170 PF13087 AAA domain THMA_RS03170 PF13086 AAA domain THMA_RS03170 PF13195 Protein of unknown function (DUF4011) THMA_RS03170 PF13087 AAA domain THMA_RS03170 PF13086 AAA domain THMA_RS03175 PF00534 Glycosyl transferases group 1 THMA_RS03175 PF13439 Glycosyltransferase Family 4 THMA_RS03185 PF01501 Glycosyl transferase family 8 THMA_RS03185 PF00535 Glycosyl transferase family 2 THMA_RS03190 PF00534 Glycosyl transferases group 1 THMA_RS03190 PF13439 Glycosyltransferase Family 4 THMA_RS03200 PF00534 Glycosyl transferases group 1 THMA_RS03200 PF13439 Glycosyltransferase Family 4 THMA_RS03215 PF00534 Glycosyl transferases group 1 THMA_RS03215 PF13439 Glycosyltransferase Family 4 THMA_RS03230 PF16363 GDP-mannose 4,6 dehydratase THMA_RS03235 PF00534 Glycosyl transferases group 1 THMA_RS03235 PF13477 Glycosyl transferase 4-like THMA_RS03240 PF02397 Bacterial sugar transferase THMA_RS03245 PF10135 Rod binding protein THMA_RS03245 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase THMA_RS03270 PF02563 Polysaccharide biosynthesis/export protein THMA_RS03270 PF18412 Outer-membrane lipoprotein Wza C-terminal domain THMA_RS03270 PF10531 SLBB domain THMA_RS03280 PF13419 Haloacid dehalogenase-like hydrolase THMA_RS03290 PF03415 Clostripain family THMA_RS03300 PF02540 NAD synthase THMA_RS03310 PF02542 YgbB family THMA_RS03340 PF00919 Uncharacterized protein family UPF0004 THMA_RS03340 PF01938 TRAM domain THMA_RS03340 PF04055 Radical SAM superfamily THMA_RS03345 PF17284 Spermidine synthase tetramerisation domain THMA_RS03350 PF02675 S-adenosylmethionine decarboxylase THMA_RS03355 PF01381 Helix-turn-helix THMA_RS03360 PF02915 Rubrerythrin THMA_RS03365 PF01880 Desulfoferrodoxin THMA_RS03370 PF00301 Rubredoxin THMA_RS03375 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase THMA_RS03385 PF00550 Phosphopantetheine attachment site THMA_RS03400 PF00291 Pyridoxal-phosphate dependent enzyme THMA_RS03405 PF00132 Bacterial transferase hexapeptide (six repeats) THMA_RS03410 PF01026 TatD related DNase THMA_RS03415 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THMA_RS03445 PF00460 Flagella basal body rod protein THMA_RS03445 PF07559 Flagellar basal body protein FlaE THMA_RS03445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMA_RS03450 PF06289 Flagellar and Swarming motility proteins THMA_RS03455 PF01618 MotA/TolQ/ExbB proton channel family THMA_RS03460 PF13677 Membrane MotB of proton-channel complex MotA/MotB THMA_RS03460 PF00691 OmpA family THMA_RS03470 PF02154 Flagellar motor switch protein FliM THMA_RS03470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THMA_RS03475 PF04509 CheC-like family THMA_RS03475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THMA_RS03505 PF12169 DNA polymerase III subunits gamma and tau domain III THMA_RS03510 PF02575 YbaB/EbfC DNA-binding family THMA_RS03515 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THMA_RS03515 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain THMA_RS03520 PF00162 Phosphoglycerate kinase THMA_RS03520 PF00121 Triosephosphate isomerase THMA_RS03535 PF01648 4'-phosphopantetheinyl transferase superfamily THMA_RS03545 PF05698 Bacterial trigger factor protein (TF) C-terminus THMA_RS03545 PF05697 Bacterial trigger factor protein (TF) THMA_RS03550 PF00574 Clp protease THMA_RS03565 PF00813 FliP family THMA_RS03575 PF00072 Response regulator receiver domain THMA_RS03580 PF01584 CheW-like domain THMA_RS03585 PF07194 P2 response regulator binding domain THMA_RS03585 PF01627 Hpt domain THMA_RS03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMA_RS03585 PF01584 CheW-like domain THMA_RS03585 PF02895 Signal transducing histidine kinase, homodimeric domain THMA_RS03590 PF02464 Competence-damaged protein THMA_RS03590 PF18146 Damage-inducible protein CinA KH domain THMA_RS03590 PF00994 Probable molybdopterin binding domain THMA_RS03600 PF00005 ABC transporter THMA_RS03610 PF02527 rRNA small subunit methyltransferase G THMA_RS03615 PF03099 Biotin/lipoate A/B protein ligase family THMA_RS03620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THMA_RS03650 PF01368 DHH family THMA_RS03650 PF00571 CBS domain THMA_RS03650 PF12627 Probable RNA and SrmB- binding site of polymerase A THMA_RS03650 PF01743 Poly A polymerase head domain THMA_RS03650 PF02272 DHHA1 domain THMA_RS03655 PF01039 Carboxyl transferase domain THMA_RS03665 PF00364 Biotin-requiring enzyme THMA_RS03670 PF01584 CheW-like domain THMA_RS03675 PF09190 DALR domain THMA_RS03675 PF01406 tRNA synthetases class I (C) catalytic domain THMA_RS03680 PF00464 Serine hydroxymethyltransferase THMA_RS03690 PF00575 S1 RNA binding domain THMA_RS03690 PF00773 RNB domain THMA_RS03690 PF08206 Ribonuclease B OB domain THMA_RS03690 PF17876 Cold shock domain THMA_RS03700 PF01699 Sodium/calcium exchanger protein THMA_RS03710 PF01523 Putative modulator of DNA gyrase THMA_RS03715 PF01523 Putative modulator of DNA gyrase THMA_RS03730 PF02824 TGS domain THMA_RS03730 PF04607 Region found in RelA / SpoT proteins THMA_RS03730 PF13291 ACT domain THMA_RS03735 PF02580 D-Tyr-tRNA(Tyr) deacylase THMA_RS03740 PF02677 Epoxyqueuosine reductase QueH THMA_RS03755 PF01134 Glucose inhibited division protein A THMA_RS03765 PF01238 Phosphomannose isomerase type I THMA_RS03780 PF01966 HD domain THMA_RS03785 PF03129 Anticodon binding domain THMA_RS03785 PF02824 TGS domain THMA_RS03785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THMA_RS03785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THMA_RS03790 PF01467 Cytidylyltransferase-like THMA_RS03795 PF00149 Calcineurin-like phosphoesterase THMA_RS03805 PF00534 Glycosyl transferases group 1 THMA_RS03805 PF13439 Glycosyltransferase Family 4 THMA_RS03820 PF13180 PDZ domain THMA_RS03820 PF03572 Peptidase family S41 THMA_RS03840 PF00485 Phosphoribulokinase / Uridine kinase family THMA_RS03850 PF11975 Family 4 glycosyl hydrolase C-terminal domain THMA_RS03850 PF02056 Family 4 glycosyl hydrolase THMA_RS03855 PF01209 ubiE/COQ5 methyltransferase family THMA_RS03860 PF18267 Rubredoxin NAD+ reductase C-terminal domain THMA_RS03860 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMA_RS03860 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THMA_RS03860 PF04324 BFD-like [2Fe-2S] binding domain THMA_RS03865 PF00753 Metallo-beta-lactamase superfamily THMA_RS03865 PF00258 Flavodoxin THMA_RS03870 PF00535 Glycosyl transferase family 2 THMA_RS03875 PF00535 Glycosyl transferase family 2 THMA_RS03875 PF13181 Tetratricopeptide repeat THMA_RS03880 PF00700 Bacterial flagellin C-terminal helical region THMA_RS03880 PF00669 Bacterial flagellin N-terminal helical region THMA_RS03900 PF00318 Ribosomal protein S2 THMA_RS03905 PF01906 Putative heavy-metal-binding THMA_RS03915 PF00005 ABC transporter THMA_RS03920 PF00392 Bacterial regulatory proteins, gntR family THMA_RS03920 PF07702 UTRA domain THMA_RS03925 PF00128 Alpha amylase, catalytic domain THMA_RS03925 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THMA_RS03925 PF02806 Alpha amylase, C-terminal all-beta domain THMA_RS03930 PF01926 50S ribosome-binding GTPase THMA_RS03935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THMA_RS03935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THMA_RS03935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THMA_RS03935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THMA_RS03940 PF00919 Uncharacterized protein family UPF0004 THMA_RS03940 PF18693 TRAM domain THMA_RS03940 PF04055 Radical SAM superfamily THMA_RS03945 PF09115 DNA polymerase III, delta subunit, C terminal THMA_RS03950 PF04468 PSP1 C-terminal conserved region THMA_RS03955 PF11146 Protein of unknown function (DUF2905) THMA_RS03965 PF00009 Elongation factor Tu GTP binding domain THMA_RS03965 PF11987 Translation-initiation factor 2 THMA_RS03965 PF04760 Translation initiation factor IF-2, N-terminal region THMA_RS03990 PF00578 AhpC/TSA family THMA_RS04015 PF04454 Encapsulating protein for peroxidase THMA_RS04030 PF01964 Radical SAM ThiC family THMA_RS04040 PF08543 Phosphomethylpyrimidine kinase THMA_RS04040 PF10120 Thiamine-phosphate synthase THMA_RS04045 PF14489 QueF-like protein THMA_RS04050 PF02592 Putative vitamin uptake transporter THMA_RS04055 PF00005 ABC transporter THMA_RS04075 PF04029 2-phosphosulpholactate phosphatase THMA_RS04080 PF00698 Acyl transferase domain THMA_RS04085 PF02632 BioY family THMA_RS04090 PF03060 Nitronate monooxygenase THMA_RS04095 PF07977 FabA-like domain THMA_RS04100 PF02801 Beta-ketoacyl synthase, C-terminal domain THMA_RS04100 PF00109 Beta-ketoacyl synthase, N-terminal domain THMA_RS04105 PF00117 Glutamine amidotransferase class-I THMA_RS04105 PF06418 CTP synthase N-terminus THMA_RS04110 PF02811 PHP domain THMA_RS04115 PF00953 Glycosyl transferase family 4 THMA_RS04125 PF00578 AhpC/TSA family THMA_RS04125 PF10417 C-terminal domain of 1-Cys peroxiredoxin THMA_RS04130 PF00480 ROK family THMA_RS04135 PF00933 Glycosyl hydrolase family 3 N terminal domain THMA_RS04140 PF01547 Bacterial extracellular solute-binding protein THMA_RS04145 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS04150 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS04155 PF01380 SIS domain THMA_RS04160 PF01979 Amidohydrolase family THMA_RS04165 PF01554 MatE THMA_RS04185 PF03808 Glycosyl transferase WecB/TagA/CpsF family THMA_RS04190 PF00860 Permease family THMA_RS04195 PF00465 Iron-containing alcohol dehydrogenase THMA_RS04205 PF01409 tRNA synthetases class II core domain (F) THMA_RS04205 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain THMA_RS04210 PF03147 Ferredoxin-fold anticodon binding domain THMA_RS04210 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain THMA_RS04210 PF03484 tRNA synthetase B5 domain THMA_RS04210 PF03483 B3/4 domain THMA_RS04210 PF01588 Putative tRNA binding domain THMA_RS04215 PF18665 Tetracyclin repressor-like, C-terminal domain THMA_RS04215 PF00440 Bacterial regulatory proteins, tetR family THMA_RS04225 PF06463 Molybdenum Cofactor Synthesis C THMA_RS04225 PF04055 Radical SAM superfamily THMA_RS04235 PF08402 TOBE domain THMA_RS04235 PF00005 ABC transporter THMA_RS04240 PF00294 pfkB family carbohydrate kinase THMA_RS04250 PF00919 Uncharacterized protein family UPF0004 THMA_RS04250 PF04055 Radical SAM superfamily THMA_RS04255 PF01063 Amino-transferase class IV THMA_RS04265 PF00204 DNA gyrase B THMA_RS04265 PF00986 DNA gyrase B subunit, carboxyl terminus THMA_RS04265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMA_RS04265 PF01751 Toprim domain THMA_RS04275 PF02491 SHS2 domain inserted in FTSA THMA_RS04275 PF11983 Membrane-attachment and polymerisation-promoting switch THMA_RS04280 PF12327 FtsZ family, C-terminal domain THMA_RS04280 PF00091 Tubulin/FtsZ family, GTPase domain THMA_RS04285 PF00437 Type II/IV secretion system protein THMA_RS04295 PF01098 Cell cycle protein THMA_RS04310 PF00072 Response regulator receiver domain THMA_RS04315 PF07837 Formiminotransferase domain, N-terminal subdomain THMA_RS04315 PF02971 Formiminotransferase domain THMA_RS04320 PF02590 Predicted SPOUT methyltransferase THMA_RS04325 PF00571 CBS domain THMA_RS04325 PF03471 Transporter associated domain THMA_RS04330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THMA_RS04335 PF01926 50S ribosome-binding GTPase THMA_RS04335 PF07650 KH domain THMA_RS04340 PF01926 50S ribosome-binding GTPase THMA_RS04345 PF00684 DnaJ central domain THMA_RS04345 PF01556 DnaJ C terminal domain THMA_RS04345 PF00226 DnaJ domain THMA_RS04350 PF01025 GrpE THMA_RS04355 PF01628 HrcA protein C terminal domain THMA_RS04365 PF03481 Putative GTP-binding controlling metal-binding THMA_RS04365 PF01300 Telomere recombination THMA_RS04370 PF00672 HAMP domain THMA_RS04370 PF00512 His Kinase A (phospho-acceptor) domain THMA_RS04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMA_RS04370 PF14827 Double sensory domain of two-component sensor kinase THMA_RS04370 PF13426 PAS domain THMA_RS04375 PF08668 HDOD domain THMA_RS04380 PF02033 Ribosome-binding factor A THMA_RS04385 PF01509 TruB family pseudouridylate synthase (N terminal domain) THMA_RS04385 PF01472 PUA domain THMA_RS04385 PF16198 tRNA pseudouridylate synthase B C-terminal domain THMA_RS04390 PF01687 Riboflavin kinase THMA_RS04390 PF06574 FAD synthetase THMA_RS04400 PF02699 Preprotein translocase subunit THMA_RS04405 PF02355 Protein export membrane protein THMA_RS04405 PF07549 SecD/SecF GG Motif THMA_RS04410 PF07549 SecD/SecF GG Motif THMA_RS04410 PF02355 Protein export membrane protein THMA_RS04415 PF00483 Nucleotidyl transferase THMA_RS04420 PF01281 Ribosomal protein L9, N-terminal domain THMA_RS04420 PF03948 Ribosomal protein L9, C-terminal domain THMA_RS04425 PF12706 Beta-lactamase superfamily domain THMA_RS04425 PF00753 Metallo-beta-lactamase superfamily THMA_RS04435 PF01145 SPFH domain / Band 7 family THMA_RS04445 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMA_RS04445 PF13192 Thioredoxin domain THMA_RS04450 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMA_RS04455 PF03793 PASTA domain THMA_RS04455 PF00905 Penicillin binding protein transpeptidase domain THMA_RS04455 PF03717 Penicillin-binding Protein dimerisation domain THMA_RS04465 PF01795 MraW methylase family THMA_RS04470 PF02861 Clp amino terminal domain, pathogenicity island component THMA_RS04470 PF17871 AAA lid domain THMA_RS04470 PF07724 AAA domain (Cdc48 subfamily) THMA_RS04470 PF10431 C-terminal, D2-small domain, of ClpB protein THMA_RS04470 PF00004 ATPase family associated with various cellular activities (AAA) THMA_RS04475 PF00814 Glycoprotease family THMA_RS04485 PF01545 Cation efflux family THMA_RS04485 PF16916 Dimerisation domain of Zinc Transporter THMA_RS04490 PF03952 Enolase, N-terminal domain THMA_RS04490 PF00113 Enolase, C-terminal TIM barrel domain THMA_RS04495 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg THMA_RS04495 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase THMA_RS04495 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II THMA_RS04505 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit THMA_RS04510 PF04204 Homoserine O-succinyltransferase THMA_RS04515 PF01053 Cys/Met metabolism PLP-dependent enzyme THMA_RS04520 PF03309 Type III pantothenate kinase THMA_RS04535 PF00905 Penicillin binding protein transpeptidase domain THMA_RS04535 PF00912 Transglycosylase THMA_RS04540 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain THMA_RS04540 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain THMA_RS04550 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase THMA_RS04550 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain THMA_RS04550 PF13288 DXP reductoisomerase C-terminal domain THMA_RS04555 PF17820 PDZ domain THMA_RS04555 PF02163 Peptidase family M50 THMA_RS04560 PF04551 GcpE protein THMA_RS04565 PF00571 CBS domain THMA_RS04565 PF01769 Divalent cation transporter THMA_RS04565 PF03448 MgtE intracellular N domain THMA_RS04570 PF02673 Bacitracin resistance protein BacA THMA_RS04580 PF00534 Glycosyl transferases group 1 THMA_RS04580 PF08323 Starch synthase catalytic domain THMA_RS04585 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain THMA_RS04585 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain THMA_RS04590 PF04232 Stage V sporulation protein S (SpoVS) THMA_RS04615 PF04545 Sigma-70, region 4 THMA_RS04615 PF04542 Sigma-70 region 2 THMA_RS04615 PF04539 Sigma-70 region 3 THMA_RS04620 PF03975 CheD chemotactic sensory transduction THMA_RS04625 PF04509 CheC-like family THMA_RS04635 PF10609 NUBPL iron-transfer P-loop NTPase THMA_RS04640 PF00448 SRP54-type protein, GTPase domain THMA_RS04645 PF00771 FHIPEP family THMA_RS04650 PF01312 FlhB HrpN YscU SpaS Family THMA_RS04655 PF01311 Bacterial export proteins, family 1 THMA_RS04660 PF01008 Initiation factor 2 subunit family THMA_RS04665 PF13145 PPIC-type PPIASE domain THMA_RS04670 PF03819 MazG nucleotide pyrophosphohydrolase domain THMA_RS04675 PF01865 Protein of unknown function DUF47 THMA_RS04680 PF01351 Ribonuclease HII THMA_RS04690 PF01384 Phosphate transporter family THMA_RS04695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMA_RS04705 PF00465 Iron-containing alcohol dehydrogenase THMA_RS04715 PF03853 YjeF-related protein N-terminus THMA_RS04715 PF01256 Carbohydrate kinase THMA_RS04730 PF02390 Putative methyltransferase THMA_RS04735 PF11638 DnaA N-terminal domain THMA_RS04735 PF00308 Bacterial dnaA protein THMA_RS04735 PF08299 Bacterial dnaA protein helix-turn-helix THMA_RS04745 PF16236 Domain of unknown function (DUF4895) THMA_RS04750 PF13203 Putative metallopeptidase domain THMA_RS04750 PF09967 VWA-like domain (DUF2201) THMA_RS04775 PF03600 Citrate transporter THMA_RS04780 PF00571 CBS domain THMA_RS04780 PF00478 IMP dehydrogenase / GMP reductase domain THMA_RS04785 PF01979 Amidohydrolase family THMA_RS04800 PF02261 Aspartate decarboxylase THMA_RS04805 PF00849 RNA pseudouridylate synthase THMA_RS04805 PF01479 S4 domain THMA_RS04825 PF00120 Glutamine synthetase, catalytic domain THMA_RS04825 PF03951 Glutamine synthetase, beta-Grasp domain THMA_RS04855 PF00356 Bacterial regulatory proteins, lacI family THMA_RS04870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THMA_RS04870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THMA_RS04875 PF02780 Transketolase, C-terminal domain THMA_RS04875 PF02779 Transketolase, pyrimidine binding domain THMA_RS04880 PF00456 Transketolase, thiamine diphosphate binding domain THMA_RS04885 PF02653 Branched-chain amino acid transport system / permease component THMA_RS04890 PF00005 ABC transporter THMA_RS04900 PF13407 Periplasmic binding protein domain THMA_RS04905 PF05025 RbsD / FucU transport protein family THMA_RS04910 PF00294 pfkB family carbohydrate kinase THMA_RS04915 PF04011 LemA family THMA_RS04930 PF01969 Protein of unknown function DUF111 THMA_RS04935 PF00731 AIR carboxylase THMA_RS04940 PF02540 NAD synthase THMA_RS04945 PF02899 Phage integrase, N-terminal SAM-like domain THMA_RS04945 PF00589 Phage integrase family THMA_RS04970 PF00990 Diguanylate cyclase, GGDEF domain THMA_RS04995 PF01206 Sulfurtransferase TusA THMA_RS05015 PF04143 Sulphur transport THMA_RS05020 PF01206 Sulfurtransferase TusA THMA_RS05025 PF00207 Alpha-2-macroglobulin family THMA_RS05025 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain THMA_RS05025 PF01835 MG2 domain THMA_RS05025 PF07703 Alpha-2-macroglobulin bait region domain THMA_RS05025 PF07678 A-macroglobulin TED domain THMA_RS05035 PF06672 Protein of unknown function (DUF1175) THMA_RS05055 PF00271 Helicase conserved C-terminal domain THMA_RS05055 PF00176 SNF2 family N-terminal domain THMA_RS05105 PF05168 HEPN domain THMA_RS05135 PF12833 Helix-turn-helix domain THMA_RS05135 PF06719 AraC-type transcriptional regulator N-terminus THMA_RS05140 PF00248 Aldo/keto reductase family THMA_RS05150 PF00248 Aldo/keto reductase family THMA_RS05180 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain THMA_RS05180 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase THMA_RS05205 PF07690 Major Facilitator Superfamily THMA_RS05210 PF12146 Serine aminopeptidase, S33 THMA_RS05245 PF13732 Domain of unknown function (DUF4162) THMA_RS05245 PF00005 ABC transporter THMA_RS05260 PF00462 Glutaredoxin THMA_RS05270 PF00483 Nucleotidyl transferase THMA_RS05270 PF01050 Mannose-6-phosphate isomerase THMA_RS05275 PF02350 UDP-N-acetylglucosamine 2-epimerase THMA_RS05280 PF01502 Phosphoribosyl-AMP cyclohydrolase THMA_RS05280 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase THMA_RS05285 PF00977 Histidine biosynthesis protein THMA_RS05290 PF00977 Histidine biosynthesis protein THMA_RS05295 PF00117 Glutamine amidotransferase class-I THMA_RS05300 PF00475 Imidazoleglycerol-phosphate dehydratase THMA_RS05305 PF00155 Aminotransferase class I and II THMA_RS05310 PF00815 Histidinol dehydrogenase THMA_RS05315 PF01634 ATP phosphoribosyltransferase THMA_RS05320 PF13393 Histidyl-tRNA synthetase THMA_RS05325 PF12323 Helix-turn-helix domain THMA_RS05325 PF01385 Probable transposase THMA_RS05325 PF07282 Putative transposase DNA-binding domain THMA_RS05330 PF03600 Citrate transporter THMA_RS05340 PF03775 Septum formation inhibitor MinC, C-terminal domain THMA_RS05345 PF05343 M42 glutamyl aminopeptidase THMA_RS05350 PF05343 M42 glutamyl aminopeptidase THMA_RS05355 PF05343 M42 glutamyl aminopeptidase THMA_RS05365 PF10531 SLBB domain THMA_RS05375 PF00005 ABC transporter THMA_RS05385 PF03091 CutA1 divalent ion tolerance protein THMA_RS05390 PF02254 TrkA-N domain THMA_RS05390 PF07885 Ion channel THMA_RS05400 PF04232 Stage V sporulation protein S (SpoVS) THMA_RS05415 PF02837 Glycosyl hydrolases family 2, sugar binding domain THMA_RS05415 PF02836 Glycosyl hydrolases family 2, TIM barrel domain THMA_RS05415 PF00703 Glycosyl hydrolases family 2 THMA_RS05420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS05420 PF00005 ABC transporter THMA_RS05425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS05425 PF00005 ABC transporter THMA_RS05430 PF12911 N-terminal TM domain of oligopeptide transport permease C THMA_RS05430 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS05435 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS05440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMA_RS05445 PF02056 Family 4 glycosyl hydrolase THMA_RS05445 PF11975 Family 4 glycosyl hydrolase C-terminal domain THMA_RS05450 PF08220 DeoR-like helix-turn-helix domain THMA_RS05450 PF00455 DeoR C terminal sensor domain THMA_RS05460 PF01261 Xylose isomerase-like TIM barrel THMA_RS05470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THMA_RS05470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THMA_RS05480 PF02540 NAD synthase THMA_RS05480 PF00958 GMP synthase C terminal domain THMA_RS05480 PF00117 Glutamine amidotransferase class-I THMA_RS05490 PF02569 Pantoate-beta-alanine ligase THMA_RS05505 PF02502 Ribose/Galactose Isomerase THMA_RS05510 PF01740 STAS domain THMA_RS05515 PF00717 Peptidase S24-like THMA_RS05515 PF01726 LexA DNA binding domain THMA_RS05520 PF01951 Archease protein family (MTH1598/TM1083) THMA_RS05525 PF03989 DNA gyrase C-terminal domain, beta-propeller THMA_RS05525 PF00521 DNA gyrase/topoisomerase IV, subunit A THMA_RS05530 PF08264 Anticodon-binding domain of tRNA THMA_RS05530 PF09334 tRNA synthetases class I (M) THMA_RS05530 PF01588 Putative tRNA binding domain THMA_RS05545 PF02254 TrkA-N domain THMA_RS05545 PF02080 TrkA-C domain THMA_RS05555 PF02386 Cation transport protein THMA_RS05560 PF13393 Histidyl-tRNA synthetase THMA_RS05560 PF03129 Anticodon binding domain THMA_RS05575 PF05746 DALR anticodon binding domain THMA_RS05575 PF00750 tRNA synthetases class I (R) THMA_RS05575 PF03485 Arginyl tRNA synthetase N terminal domain THMA_RS05580 PF05958 tRNA (Uracil-5-)-methyltransferase THMA_RS05585 PF00206 Lyase THMA_RS05585 PF10397 Adenylosuccinate lyase C-terminus THMA_RS05590 PF00709 Adenylosuccinate synthetase THMA_RS05595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THMA_RS05595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THMA_RS05605 PF02223 Thymidylate kinase THMA_RS05615 PF12850 Calcineurin-like phosphoesterase superfamily domain THMA_RS05620 PF00035 Double-stranded RNA binding motif THMA_RS05620 PF14622 Ribonuclease-III-like THMA_RS05710 PF13416 Bacterial extracellular solute-binding protein THMA_RS05715 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS05720 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS05725 PF02465 Flagellar hook-associated protein 2 N-terminus THMA_RS05725 PF07195 Flagellar hook-associated protein 2 C-terminus THMA_RS05725 PF07196 Flagellin hook IN motif THMA_RS05750 PF00210 Ferritin-like domain THMA_RS05755 PF01048 Phosphorylase superfamily THMA_RS05760 PF01515 Phosphate acetyl/butaryl transferase THMA_RS05765 PF00155 Aminotransferase class I and II THMA_RS05770 PF07726 ATPase family associated with various cellular activities (AAA) THMA_RS05770 PF17863 AAA lid domain THMA_RS05790 PF02653 Branched-chain amino acid transport system / permease component THMA_RS05795 PF02653 Branched-chain amino acid transport system / permease component THMA_RS05795 PF11862 Domain of unknown function (DUF3382) THMA_RS05800 PF12399 Branched-chain amino acid ATP-binding cassette transporter THMA_RS05800 PF00005 ABC transporter THMA_RS05805 PF00005 ABC transporter THMA_RS05810 PF00478 IMP dehydrogenase / GMP reductase domain THMA_RS05810 PF00571 CBS domain THMA_RS05815 PF02683 Cytochrome C biogenesis protein transmembrane region THMA_RS05825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMA_RS05835 PF01966 HD domain THMA_RS05845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMA_RS05845 PF00672 HAMP domain THMA_RS05850 PF00072 Response regulator receiver domain THMA_RS05850 PF01966 HD domain THMA_RS05855 PF00180 Isocitrate/isopropylmalate dehydrogenase THMA_RS05865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMA_RS05870 PF00005 ABC transporter THMA_RS05870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS05875 PF00005 ABC transporter THMA_RS05875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS05880 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS05880 PF12911 N-terminal TM domain of oligopeptide transport permease C THMA_RS05885 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase THMA_RS05890 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain THMA_RS05890 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain THMA_RS05895 PF04024 PspC domain THMA_RS05905 PF00117 Glutamine amidotransferase class-I THMA_RS05925 PF03448 MgtE intracellular N domain THMA_RS05925 PF01769 Divalent cation transporter THMA_RS05925 PF00571 CBS domain THMA_RS05930 PF12706 Beta-lactamase superfamily domain THMA_RS05935 PF00990 Diguanylate cyclase, GGDEF domain THMA_RS05935 PF17155 Gammaproteobacterial periplasmic sensor domain THMA_RS05945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THMA_RS05950 PF06969 HemN C-terminal domain THMA_RS05950 PF04055 Radical SAM superfamily THMA_RS05960 PF11897 Protein of unknown function (DUF3417) THMA_RS05960 PF00343 Carbohydrate phosphorylase THMA_RS05970 PF00072 Response regulator receiver domain THMA_RS05980 PF03063 Prismane/CO dehydrogenase family THMA_RS06005 PF13419 Haloacid dehalogenase-like hydrolase THMA_RS06010 PF00583 Acetyltransferase (GNAT) family THMA_RS06015 PF02561 Flagellar protein FliS THMA_RS06025 PF00293 NUDIX domain THMA_RS06030 PF02463 RecF/RecN/SMC N terminal domain THMA_RS06030 PF06470 SMC proteins Flexible Hinge Domain THMA_RS06035 PF00248 Aldo/keto reductase family THMA_RS06040 PF03707 Bacterial signalling protein N terminal repeat THMA_RS06040 PF00990 Diguanylate cyclase, GGDEF domain THMA_RS06040 PF00563 EAL domain THMA_RS06045 PF02142 MGS-like domain THMA_RS06055 PF01594 AI-2E family transporter THMA_RS06075 PF10509 Galactokinase galactose-binding signature THMA_RS06075 PF00288 GHMP kinases N terminal domain THMA_RS06075 PF08544 GHMP kinases C terminal THMA_RS06080 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain THMA_RS06080 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain THMA_RS06090 PF02929 Beta galactosidase small chain THMA_RS06090 PF16353 Domain of unknown function(DUF4981) THMA_RS06090 PF00703 Glycosyl hydrolases family 2 THMA_RS06090 PF02836 Glycosyl hydrolases family 2, TIM barrel domain THMA_RS06090 PF02837 Glycosyl hydrolases family 2, sugar binding domain THMA_RS06095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS06095 PF00005 ABC transporter THMA_RS06100 PF02449 Beta-galactosidase THMA_RS06100 PF08533 Beta-galactosidase C-terminal domain THMA_RS06100 PF08532 Beta-galactosidase trimerisation domain THMA_RS06105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS06105 PF00005 ABC transporter THMA_RS06110 PF12911 N-terminal TM domain of oligopeptide transport permease C THMA_RS06110 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS06115 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS06130 PF07745 Glycosyl hydrolase family 53 THMA_RS06135 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS06140 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS06140 PF14785 Maltose transport system permease protein MalF P2 domain THMA_RS06145 PF01547 Bacterial extracellular solute-binding protein THMA_RS06150 PF01899 Na+/H+ ion antiporter subunit THMA_RS06155 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) THMA_RS06170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THMA_RS06170 PF00361 Proton-conducting membrane transporter THMA_RS06170 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter THMA_RS06170 PF13244 Domain of unknown function (DUF4040) THMA_RS06175 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L THMA_RS06180 PF00361 Proton-conducting membrane transporter THMA_RS06185 PF00361 Proton-conducting membrane transporter THMA_RS06195 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THMA_RS06200 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THMA_RS06200 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THMA_RS06205 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THMA_RS06210 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THMA_RS06210 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMA_RS06220 PF00005 ABC transporter THMA_RS06220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS06225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS06225 PF00005 ABC transporter THMA_RS06230 PF12911 N-terminal TM domain of oligopeptide transport permease C THMA_RS06230 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS06235 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS06240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMA_RS06245 PF01325 Iron dependent repressor, N-terminal DNA binding domain THMA_RS06245 PF00480 ROK family THMA_RS06250 PF04041 beta-1,4-mannooligosaccharide phosphorylase THMA_RS06255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMA_RS06265 PF01418 Helix-turn-helix domain, rpiR family THMA_RS06265 PF01380 SIS domain THMA_RS06270 PF00535 Glycosyl transferase family 2 THMA_RS06275 PF00534 Glycosyl transferases group 1 THMA_RS06280 PF09261 Alpha mannosidase middle domain THMA_RS06280 PF07748 Glycosyl hydrolases family 38 C-terminal domain THMA_RS06280 PF01074 Glycosyl hydrolases family 38 N-terminal domain THMA_RS06285 PF08402 TOBE domain THMA_RS06285 PF00005 ABC transporter THMA_RS06290 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS06295 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS06310 PF00580 UvrD/REP helicase N-terminal domain THMA_RS06310 PF13361 UvrD-like helicase C-terminal domain THMA_RS06320 PF06071 Protein of unknown function (DUF933) THMA_RS06320 PF01926 50S ribosome-binding GTPase THMA_RS06335 PF01259 SAICAR synthetase THMA_RS06340 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase THMA_RS06350 PF00586 AIR synthase related protein, N-terminal domain THMA_RS06350 PF02769 AIR synthase related protein, C-terminal domain THMA_RS06350 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain THMA_RS06350 PF16904 Phosphoribosylformylglycinamidine synthase II C-terminus THMA_RS06355 PF00156 Phosphoribosyl transferase domain THMA_RS06360 PF00551 Formyl transferase THMA_RS06365 PF01808 AICARFT/IMPCHase bienzyme THMA_RS06365 PF02142 MGS-like domain THMA_RS06370 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain THMA_RS06370 PF02843 Phosphoribosylglycinamide synthetase, C domain THMA_RS06370 PF02844 Phosphoribosylglycinamide synthetase, N domain THMA_RS06375 PF00586 AIR synthase related protein, N-terminal domain THMA_RS06375 PF02769 AIR synthase related protein, C-terminal domain THMA_RS06385 PF00795 Carbon-nitrogen hydrolase THMA_RS06385 PF02540 NAD synthase THMA_RS06390 PF13419 Haloacid dehalogenase-like hydrolase THMA_RS06395 PF00155 Aminotransferase class I and II THMA_RS06400 PF00005 ABC transporter THMA_RS06400 PF00664 ABC transporter transmembrane region THMA_RS06410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMA_RS06410 PF00512 His Kinase A (phospho-acceptor) domain THMA_RS06415 PF00486 Transcriptional regulatory protein, C terminal THMA_RS06415 PF00072 Response regulator receiver domain THMA_RS06420 PF01895 PhoU domain THMA_RS06425 PF00005 ABC transporter THMA_RS06430 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS06440 PF12849 PBP superfamily domain THMA_RS06465 PF06968 Biotin and Thiamin Synthesis associated domain THMA_RS06465 PF04055 Radical SAM superfamily THMA_RS06470 PF01053 Cys/Met metabolism PLP-dependent enzyme THMA_RS06475 PF07963 Prokaryotic N-terminal methylation motif THMA_RS06475 PF00114 Pilin (bacterial filament) THMA_RS06480 PF01425 Amidase THMA_RS06485 PF02934 GatB/GatE catalytic domain THMA_RS06485 PF02637 GatB domain THMA_RS06500 PF03459 TOBE domain THMA_RS06500 PF17912 MalK OB fold domain THMA_RS06500 PF00005 ABC transporter THMA_RS06505 PF02491 SHS2 domain inserted in FTSA THMA_RS06510 PF01713 Smr domain THMA_RS06510 PF00488 MutS domain V THMA_RS06525 PF02056 Family 4 glycosyl hydrolase THMA_RS06525 PF11975 Family 4 glycosyl hydrolase C-terminal domain THMA_RS06530 PF00535 Glycosyl transferase family 2 THMA_RS06540 PF02660 Glycerol-3-phosphate acyltransferase THMA_RS06545 PF00355 Rieske [2Fe-2S] domain THMA_RS06555 PF01717 Cobalamin-independent synthase, Catalytic domain THMA_RS06555 PF08267 Cobalamin-independent synthase, N-terminal domain THMA_RS06560 PF07883 Cupin domain THMA_RS06565 PF01018 GTP1/OBG THMA_RS06565 PF04055 Radical SAM superfamily THMA_RS06565 PF01926 50S ribosome-binding GTPase THMA_RS06580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THMA_RS06585 PF10609 NUBPL iron-transfer P-loop NTPase THMA_RS06590 PF01209 ubiE/COQ5 methyltransferase family THMA_RS06600 PF00753 Metallo-beta-lactamase superfamily THMA_RS06600 PF16123 Hydroxyacylglutathione hydrolase C-terminus THMA_RS06610 PF00248 Aldo/keto reductase family THMA_RS06630 PF00005 ABC transporter THMA_RS06665 PF00005 ABC transporter THMA_RS06665 PF00664 ABC transporter transmembrane region THMA_RS06680 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system THMA_RS06685 PF00931 NB-ARC domain THMA_RS06685 PF13176 Tetratricopeptide repeat THMA_RS06705 PF00005 ABC transporter THMA_RS06705 PF00664 ABC transporter transmembrane region THMA_RS06710 PF00005 ABC transporter THMA_RS06710 PF00664 ABC transporter transmembrane region THMA_RS06720 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system THMA_RS06735 PF04055 Radical SAM superfamily THMA_RS06735 PF13186 Iron-sulfur cluster-binding domain THMA_RS06740 PF06463 Molybdenum Cofactor Synthesis C THMA_RS06740 PF04055 Radical SAM superfamily THMA_RS06750 PF00005 ABC transporter THMA_RS06755 PF00005 ABC transporter THMA_RS06755 PF00664 ABC transporter transmembrane region THMA_RS06815 PF00355 Rieske [2Fe-2S] domain THMA_RS06840 PF00312 Ribosomal protein S15 THMA_RS06845 PF00575 S1 RNA binding domain THMA_RS06845 PF01138 3' exoribonuclease family, domain 1 THMA_RS06845 PF00013 KH domain THMA_RS06845 PF03725 3' exoribonuclease family, domain 2 THMA_RS06845 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain THMA_RS06850 PF00675 Insulinase (Peptidase family M16) THMA_RS06850 PF05193 Peptidase M16 inactive domain THMA_RS06855 PF00571 CBS domain THMA_RS06855 PF00478 IMP dehydrogenase / GMP reductase domain THMA_RS06865 PF01594 AI-2E family transporter THMA_RS06870 PF12146 Serine aminopeptidase, S33 THMA_RS06875 PF00749 tRNA synthetases class I (E and Q), catalytic domain THMA_RS06890 PF00478 IMP dehydrogenase / GMP reductase domain THMA_RS06890 PF00571 CBS domain THMA_RS06905 PF01139 tRNA-splicing ligase RtcB THMA_RS06915 PF00512 His Kinase A (phospho-acceptor) domain THMA_RS06915 PF00989 PAS fold THMA_RS06915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMA_RS06920 PF00486 Transcriptional regulatory protein, C terminal THMA_RS06920 PF00072 Response regulator receiver domain THMA_RS06925 PF08264 Anticodon-binding domain of tRNA THMA_RS06925 PF06827 Zinc finger found in FPG and IleRS THMA_RS06925 PF00133 tRNA synthetases class I (I, L, M and V) THMA_RS06930 PF00437 Type II/IV secretion system protein THMA_RS06935 PF03462 PCRF domain THMA_RS06935 PF00472 RF-1 domain THMA_RS06940 PF00460 Flagella basal body rod protein THMA_RS06945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMA_RS06945 PF00460 Flagella basal body rod protein THMA_RS06950 PF02049 Flagellar hook-basal body complex protein FliE THMA_RS06965 PF00005 ABC transporter THMA_RS06970 PF01458 Uncharacterized protein family (UPF0051) THMA_RS06975 PF01458 Uncharacterized protein family (UPF0051) THMA_RS06980 PF00266 Aminotransferase class-V THMA_RS06985 PF01592 NifU-like N terminal domain THMA_RS06995 PF00300 Histidine phosphatase superfamily (branch 1) THMA_RS07005 PF13416 Bacterial extracellular solute-binding protein THMA_RS07010 PF08402 TOBE domain THMA_RS07010 PF00005 ABC transporter THMA_RS07015 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS07020 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS07025 PF02403 Seryl-tRNA synthetase N-terminal domain THMA_RS07025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THMA_RS07030 PF04452 RNA methyltransferase THMA_RS07045 PF00288 GHMP kinases N terminal domain THMA_RS07050 PF00156 Phosphoribosyl transferase domain THMA_RS07055 PF00342 Phosphoglucose isomerase THMA_RS07065 PF01121 Dephospho-CoA kinase THMA_RS07095 PF00004 ATPase family associated with various cellular activities (AAA) THMA_RS07095 PF07724 AAA domain (Cdc48 subfamily) THMA_RS07095 PF17871 AAA lid domain THMA_RS07095 PF02861 Clp amino terminal domain, pathogenicity island component THMA_RS07095 PF10431 C-terminal, D2-small domain, of ClpB protein THMA_RS07105 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase THMA_RS07110 PF01430 Hsp33 protein THMA_RS07120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THMA_RS07120 PF01411 tRNA synthetases class II (A) THMA_RS07120 PF02272 DHHA1 domain THMA_RS07130 PF01255 Putative undecaprenyl diphosphate synthase THMA_RS07135 PF01765 Ribosome recycling factor THMA_RS07140 PF00266 Aminotransferase class-V THMA_RS07145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THMA_RS07145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THMA_RS07155 PF13732 Domain of unknown function (DUF4162) THMA_RS07155 PF00005 ABC transporter THMA_RS07160 PF01061 ABC-2 type transporter THMA_RS07165 PF13439 Glycosyltransferase Family 4 THMA_RS07165 PF00534 Glycosyl transferases group 1 THMA_RS07190 PF03537 Glycoside-hydrolase family GH114 THMA_RS07210 PF08244 Glycosyl hydrolases family 32 C terminal THMA_RS07210 PF00251 Glycosyl hydrolases family 32 N-terminal domain THMA_RS07215 PF00459 Inositol monophosphatase family THMA_RS07225 PF01458 Uncharacterized protein family (UPF0051) THMA_RS07230 PF00005 ABC transporter THMA_RS07235 PF00483 Nucleotidyl transferase THMA_RS07235 PF01066 CDP-alcohol phosphatidyltransferase THMA_RS07270 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THMA_RS07270 PF00037 4Fe-4S binding domain THMA_RS07270 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THMA_RS07275 PF02256 Iron hydrogenase small subunit THMA_RS07275 PF02906 Iron only hydrogenase large subunit, C-terminal domain THMA_RS07275 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THMA_RS07275 PF00037 4Fe-4S binding domain THMA_RS07280 PF06971 Putative DNA-binding protein N-terminus THMA_RS07280 PF02629 CoA binding domain THMA_RS07285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMA_RS07285 PF17200 Single Cache domain 2 THMA_RS07285 PF00672 HAMP domain THMA_RS07290 PF00230 Major intrinsic protein THMA_RS07295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THMA_RS07295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THMA_RS07300 PF04309 Glycerol-3-phosphate responsive antiterminator THMA_RS07305 PF04324 BFD-like [2Fe-2S] binding domain THMA_RS07305 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMA_RS07310 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMA_RS07310 PF04324 BFD-like [2Fe-2S] binding domain THMA_RS07330 PF00398 Ribosomal RNA adenine dimethylase THMA_RS07335 PF09210 Domain of unknown function (DUF1957) THMA_RS07335 PF03065 Glycosyl hydrolase family 57 THMA_RS07345 PF01008 Initiation factor 2 subunit family THMA_RS07345 PF03061 Thioesterase superfamily THMA_RS07350 PF02938 GAD domain THMA_RS07350 PF00152 tRNA synthetases class II (D, K and N) THMA_RS07350 PF01336 OB-fold nucleic acid binding domain THMA_RS07355 PF01740 STAS domain THMA_RS07360 PF02224 Cytidylate kinase THMA_RS07365 PF02401 LytB protein THMA_RS07370 PF00575 S1 RNA binding domain THMA_RS07375 PF01926 50S ribosome-binding GTPase THMA_RS07375 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal THMA_RS07380 PF02660 Glycerol-3-phosphate acyltransferase THMA_RS07395 PF03461 TRCF domain THMA_RS07395 PF17757 UvrB interaction domain THMA_RS07395 PF00271 Helicase conserved C-terminal domain THMA_RS07395 PF00270 DEAD/DEAH box helicase THMA_RS07395 PF02559 CarD-like/TRCF domain THMA_RS07400 PF04539 Sigma-70 region 3 THMA_RS07400 PF04545 Sigma-70, region 4 THMA_RS07400 PF04542 Sigma-70 region 2 THMA_RS07400 PF00140 Sigma-70 factor, region 1.2 THMA_RS07400 PF03979 Sigma-70 factor, region 1.1 THMA_RS07405 PF08275 DNA primase catalytic core, N-terminal domain THMA_RS07405 PF01807 CHC2 zinc finger THMA_RS07410 PF00380 Ribosomal protein S9/S16 THMA_RS07415 PF00572 Ribosomal protein L13 THMA_RS07420 PF12822 ECF transporter, substrate-specific component THMA_RS07425 PF01016 Ribosomal L27 protein THMA_RS07435 PF00829 Ribosomal prokaryotic L21 protein THMA_RS07450 PF02096 60Kd inner membrane protein THMA_RS07455 PF01809 Putative membrane protein insertion efficiency factor THMA_RS07460 PF00825 Ribonuclease P THMA_RS07465 PF00468 Ribosomal protein L34 THMA_RS07470 PF04227 Indigoidine synthase A like protein THMA_RS07475 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP THMA_RS07475 PF12557 Cob(I)alamin adenosyltransferase N terminal THMA_RS07480 PF01926 50S ribosome-binding GTPase THMA_RS07485 PF01966 HD domain THMA_RS07490 PF17248 Family of unknown function (DUF5317) THMA_RS07495 PF02645 Uncharacterised protein, DegV family COG1307 THMA_RS07500 PF00480 ROK family THMA_RS07505 PF07498 Rho termination factor, N-terminal domain THMA_RS07505 PF07497 Rho termination factor, RNA-binding domain THMA_RS07505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMA_RS07510 PF01196 Ribosomal protein L17 THMA_RS07515 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain THMA_RS07515 PF01000 RNA polymerase Rpb3/RpoA insert domain THMA_RS07515 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain THMA_RS07520 PF00163 Ribosomal protein S4/S9 N-terminal domain THMA_RS07520 PF01479 S4 domain THMA_RS07525 PF00411 Ribosomal protein S11 THMA_RS07530 PF00416 Ribosomal protein S13/S18 THMA_RS07535 PF00444 Ribosomal protein L36 THMA_RS07540 PF01176 Translation initiation factor 1A / IF-1 THMA_RS07545 PF00557 Metallopeptidase family M24 THMA_RS07550 PF05191 Adenylate kinase, active site lid THMA_RS07555 PF00344 SecY translocase THMA_RS07560 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A THMA_RS07565 PF00327 Ribosomal protein L30p/L7e THMA_RS07570 PF03719 Ribosomal protein S5, C-terminal domain THMA_RS07570 PF00333 Ribosomal protein S5, N-terminal domain THMA_RS07575 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast THMA_RS07580 PF00347 Ribosomal protein L6 THMA_RS07585 PF00410 Ribosomal protein S8 THMA_RS07590 PF00253 Ribosomal protein S14p/S29e THMA_RS07595 PF00673 ribosomal L5P family C-terminus THMA_RS07595 PF00281 Ribosomal protein L5 THMA_RS07600 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 THMA_RS07600 PF00467 KOW motif THMA_RS07605 PF00238 Ribosomal protein L14p/L23e THMA_RS07610 PF00366 Ribosomal protein S17 THMA_RS07615 PF00831 Ribosomal L29 protein THMA_RS07620 PF00252 Ribosomal protein L16p/L10e THMA_RS07625 PF07650 KH domain THMA_RS07625 PF00189 Ribosomal protein S3, C-terminal domain THMA_RS07630 PF00237 Ribosomal protein L22p/L17e THMA_RS07635 PF00203 Ribosomal protein S19 THMA_RS07640 PF00181 Ribosomal Proteins L2, RNA binding domain THMA_RS07640 PF03947 Ribosomal Proteins L2, C-terminal domain THMA_RS07645 PF00276 Ribosomal protein L23 THMA_RS07650 PF00573 Ribosomal protein L4/L1 family THMA_RS07655 PF00297 Ribosomal protein L3 THMA_RS07660 PF00338 Ribosomal protein S10p/S20e THMA_RS07665 PF03144 Elongation factor Tu domain 2 THMA_RS07665 PF03143 Elongation factor Tu C-terminal domain THMA_RS07665 PF00009 Elongation factor Tu GTP binding domain THMA_RS07670 PF03144 Elongation factor Tu domain 2 THMA_RS07670 PF00009 Elongation factor Tu GTP binding domain THMA_RS07670 PF03764 Elongation factor G, domain IV THMA_RS07670 PF14492 Elongation Factor G, domain II THMA_RS07670 PF00679 Elongation factor G C-terminus THMA_RS07675 PF00177 Ribosomal protein S7p/S5e THMA_RS07680 PF00164 Ribosomal protein S12/S23 THMA_RS07690 PF02562 PhoH-like protein THMA_RS07695 PF07698 7TM receptor with intracellular HD hydrolase THMA_RS07695 PF01966 HD domain THMA_RS07695 PF07697 7TM-HD extracellular THMA_RS07700 PF02130 Uncharacterized protein family UPF0054 THMA_RS07710 PF04298 Putative neutral zinc metallopeptidase THMA_RS07715 PF01189 16S rRNA methyltransferase RsmB/F THMA_RS07715 PF01029 NusB family THMA_RS07720 PF05636 HIGH Nucleotidyl Transferase THMA_RS07735 PF01546 Peptidase family M20/M25/M40 THMA_RS07735 PF07687 Peptidase dimerisation domain THMA_RS07740 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THMA_RS07740 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THMA_RS07745 PF13840 ACT domain THMA_RS07745 PF01842 ACT domain THMA_RS07745 PF00696 Amino acid kinase family THMA_RS07750 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal THMA_RS07750 PF00132 Bacterial transferase hexapeptide (six repeats) THMA_RS07750 PF14602 Hexapeptide repeat of succinyl-transferase THMA_RS07755 PF01113 Dihydrodipicolinate reductase, N-terminus THMA_RS07755 PF05173 Dihydrodipicolinate reductase, C-terminus THMA_RS07760 PF00701 Dihydrodipicolinate synthetase family THMA_RS07765 PF01678 Diaminopimelate epimerase THMA_RS07770 PF01118 Semialdehyde dehydrogenase, NAD binding domain THMA_RS07770 PF02774 Semialdehyde dehydrogenase, dimerisation domain THMA_RS07800 PF02082 Transcriptional regulator THMA_RS07805 PF01040 UbiA prenyltransferase family THMA_RS07815 PF01012 Electron transfer flavoprotein domain THMA_RS07820 PF00766 Electron transfer flavoprotein FAD-binding domain THMA_RS07820 PF01012 Electron transfer flavoprotein domain THMA_RS07840 PF00348 Polyprenyl synthetase THMA_RS07850 PF04055 Radical SAM superfamily THMA_RS07850 PF02310 B12 binding domain THMA_RS07860 PF02119 Flagellar P-ring protein THMA_RS07865 PF02107 Flagellar L-ring protein THMA_RS07875 PF00460 Flagella basal body rod protein THMA_RS07875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMA_RS07880 PF00460 Flagella basal body rod protein THMA_RS07880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THMA_RS07900 PF01368 DHH family THMA_RS07900 PF10141 Single-strand DNA-specific exonuclease, C terminal domain THMA_RS07900 PF17768 RecJ OB domain THMA_RS07900 PF02272 DHHA1 domain THMA_RS07905 PF01966 HD domain THMA_RS07910 PF02719 Polysaccharide biosynthesis protein THMA_RS07915 PF00953 Glycosyl transferase family 4 THMA_RS07920 PF07136 Protein of unknown function (DUF1385) THMA_RS07925 PF01871 AMMECR1 THMA_RS07935 PF02424 ApbE family THMA_RS07950 PF02545 Maf-like protein THMA_RS07955 PF04002 RadC-like JAB domain THMA_RS07965 PF01791 DeoC/LacD family aldolase THMA_RS07975 PF01702 Queuine tRNA-ribosyltransferase THMA_RS07990 PF00708 Acylphosphatase THMA_RS07995 PF00448 SRP54-type protein, GTPase domain THMA_RS07995 PF02881 SRP54-type protein, helical bundle domain THMA_RS07995 PF02978 Signal peptide binding domain THMA_RS08000 PF00886 Ribosomal protein S16 THMA_RS08010 PF05239 PRC-barrel domain THMA_RS08010 PF01782 RimM N-terminal domain THMA_RS08015 PF01746 tRNA (Guanine-1)-methyltransferase THMA_RS08020 PF09936 SAM-dependent RNA methyltransferase THMA_RS08025 PF01245 Ribosomal protein L19 THMA_RS08030 PF10502 Signal peptidase, peptidase S26 THMA_RS08040 PF01416 tRNA pseudouridine synthase THMA_RS08050 PF01479 S4 domain THMA_RS08050 PF01728 FtsJ-like methyltransferase THMA_RS08060 PF01043 SecA preprotein cross-linking domain THMA_RS08060 PF00271 Helicase conserved C-terminal domain THMA_RS08060 PF07517 SecA DEAD-like domain THMA_RS08060 PF07516 SecA Wing and Scaffold domain THMA_RS08065 PF00472 RF-1 domain THMA_RS08065 PF03462 PCRF domain THMA_RS08070 PF00072 Response regulator receiver domain THMA_RS08070 PF00158 Sigma-54 interaction domain THMA_RS08070 PF02954 Bacterial regulatory protein, Fis family THMA_RS08090 PF00156 Phosphoribosyl transferase domain THMA_RS08095 PF05161 MOFRL family THMA_RS08095 PF13660 Domain of unknown function (DUF4147) THMA_RS08110 PF00990 Diguanylate cyclase, GGDEF domain THMA_RS08145 PF05198 Translation initiation factor IF-3, N-terminal domain THMA_RS08145 PF00707 Translation initiation factor IF-3, C-terminal domain THMA_RS08150 PF01632 Ribosomal protein L35 THMA_RS08155 PF00453 Ribosomal protein L20 THMA_RS08160 PF10609 NUBPL iron-transfer P-loop NTPase THMA_RS08165 PF00990 Diguanylate cyclase, GGDEF domain THMA_RS08165 PF05230 MASE2 domain THMA_RS08170 PF01368 DHH family THMA_RS08170 PF02272 DHHA1 domain THMA_RS08175 PF01048 Phosphorylase superfamily THMA_RS08180 PF01168 Alanine racemase, N-terminal domain THMA_RS08185 PF08281 Sigma-70, region 4 THMA_RS08185 PF04542 Sigma-70 region 2 THMA_RS08200 PF00919 Uncharacterized protein family UPF0004 THMA_RS08200 PF18693 TRAM domain THMA_RS08200 PF04055 Radical SAM superfamily THMA_RS08205 PF02829 3H domain THMA_RS08205 PF08279 HTH domain THMA_RS08210 PF07690 Major Facilitator Superfamily THMA_RS08215 PF00696 Amino acid kinase family THMA_RS08220 PF00889 Elongation factor TS THMA_RS08225 PF10150 Ribonuclease E/G family THMA_RS08225 PF00575 S1 RNA binding domain THMA_RS08230 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein THMA_RS08230 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus THMA_RS08235 PF02645 Uncharacterised protein, DegV family COG1307 THMA_RS08240 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain THMA_RS08245 PF02874 ATP synthase alpha/beta family, beta-barrel domain THMA_RS08245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMA_RS08250 PF00231 ATP synthase THMA_RS08255 PF00306 ATP synthase alpha/beta chain, C terminal domain THMA_RS08255 PF02874 ATP synthase alpha/beta family, beta-barrel domain THMA_RS08255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THMA_RS08260 PF00213 ATP synthase delta (OSCP) subunit THMA_RS08265 PF00430 ATP synthase B/B' CF(0) THMA_RS08270 PF00137 ATP synthase subunit C THMA_RS08275 PF00119 ATP synthase A chain THMA_RS08290 PF13690 Chemotaxis phosphatase CheX THMA_RS08295 PF01367 5'-3' exonuclease, C-terminal SAM fold THMA_RS08295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain THMA_RS08295 PF00476 DNA polymerase family A THMA_RS08295 PF01612 3'-5' exonuclease THMA_RS08300 PF02627 Carboxymuconolactone decarboxylase family THMA_RS08305 PF03009 Glycerophosphoryl diester phosphodiesterase family THMA_RS08315 PF00679 Elongation factor G C-terminus THMA_RS08315 PF06421 GTP-binding protein LepA C-terminus THMA_RS08315 PF03144 Elongation factor Tu domain 2 THMA_RS08315 PF00009 Elongation factor Tu GTP binding domain THMA_RS08320 PF00703 Glycosyl hydrolases family 2 THMA_RS08320 PF16353 Domain of unknown function(DUF4981) THMA_RS08320 PF02836 Glycosyl hydrolases family 2, TIM barrel domain THMA_RS08320 PF02929 Beta galactosidase small chain THMA_RS08320 PF02837 Glycosyl hydrolases family 2, sugar binding domain THMA_RS08330 PF01195 Peptidyl-tRNA hydrolase THMA_RS08335 PF01386 Ribosomal L25p family THMA_RS08335 PF14693 Ribosomal protein TL5, C-terminal domain THMA_RS08340 PF14572 Phosphoribosyl synthetase-associated domain THMA_RS08340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase THMA_RS08345 PF12804 MobA-like NTP transferase domain THMA_RS08345 PF14602 Hexapeptide repeat of succinyl-transferase THMA_RS08345 PF00132 Bacterial transferase hexapeptide (six repeats) THMA_RS08360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE THMA_RS08365 PF00004 ATPase family associated with various cellular activities (AAA) THMA_RS08365 PF02190 ATP-dependent protease La (LON) substrate-binding domain THMA_RS08365 PF05362 Lon protease (S16) C-terminal proteolytic domain THMA_RS08375 PF00149 Calcineurin-like phosphoesterase THMA_RS08375 PF12320 Type 5 capsule protein repressor C-terminal domain THMA_RS08380 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system THMA_RS08390 PF00005 ABC transporter THMA_RS08395 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B THMA_RS08395 PF00970 Oxidoreductase FAD-binding domain THMA_RS08395 PF00175 Oxidoreductase NAD-binding domain THMA_RS08400 PF07992 Pyridine nucleotide-disulphide oxidoreductase THMA_RS08400 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THMA_RS08405 PF00186 Dihydrofolate reductase THMA_RS08410 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain THMA_RS08410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THMA_RS08410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THMA_RS08410 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain THMA_RS08415 PF01958 Domain of unknown function DUF108 THMA_RS08415 PF03447 Homoserine dehydrogenase, NAD binding domain THMA_RS08420 PF02445 Quinolinate synthetase A protein THMA_RS08425 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain THMA_RS08425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain THMA_RS08440 PF01966 HD domain THMA_RS08450 PF00128 Alpha amylase, catalytic domain THMA_RS08455 PF14492 Elongation Factor G, domain II THMA_RS08455 PF03764 Elongation factor G, domain IV THMA_RS08455 PF00679 Elongation factor G C-terminus THMA_RS08455 PF00009 Elongation factor Tu GTP binding domain THMA_RS08465 PF02885 Glycosyl transferase family, helical bundle domain THMA_RS08465 PF00591 Glycosyl transferase family, a/b domain THMA_RS08465 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain THMA_RS08470 PF00512 His Kinase A (phospho-acceptor) domain THMA_RS08470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THMA_RS08470 PF00989 PAS fold THMA_RS08470 PF16736 Single Cache-like THMA_RS08475 PF00486 Transcriptional regulatory protein, C terminal THMA_RS08475 PF00072 Response regulator receiver domain THMA_RS08485 PF01649 Ribosomal protein S20 THMA_RS08490 PF02772 S-adenosylmethionine synthetase, central domain THMA_RS08490 PF00438 S-adenosylmethionine synthetase, N-terminal domain THMA_RS08490 PF02773 S-adenosylmethionine synthetase, C-terminal domain THMA_RS08505 PF01327 Polypeptide deformylase THMA_RS08510 PF01975 Survival protein SurE THMA_RS08515 PF00005 ABC transporter THMA_RS08520 PF05175 Methyltransferase small domain THMA_RS08530 PF07687 Peptidase dimerisation domain THMA_RS08530 PF01546 Peptidase family M20/M25/M40 THMA_RS08535 PF01261 Xylose isomerase-like TIM barrel THMA_RS08565 PF01312 FlhB HrpN YscU SpaS Family THMA_RS08595 PF01966 HD domain THMA_RS08595 PF11871 Domain of unknown function (DUF3391) THMA_RS08615 PF00072 Response regulator receiver domain THMA_RS08620 PF00313 'Cold-shock' DNA-binding domain THMA_RS08625 PF01197 Ribosomal protein L31 THMA_RS08630 PF03725 3' exoribonuclease family, domain 2 THMA_RS08630 PF01138 3' exoribonuclease family, domain 1 THMA_RS08630 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain THMA_RS08630 PF00013 KH domain THMA_RS08630 PF00575 S1 RNA binding domain THMA_RS08635 PF03734 L,D-transpeptidase catalytic domain THMA_RS08635 PF01476 LysM domain THMA_RS08640 PF04127 DNA / pantothenate metabolism flavoprotein THMA_RS08640 PF02441 Flavoprotein THMA_RS08645 PF01192 RNA polymerase Rpb6 THMA_RS08650 PF00625 Guanylate kinase THMA_RS08655 PF04025 Domain of unknown function (DUF370) THMA_RS08665 PF00266 Aminotransferase class-V THMA_RS08675 PF02926 THUMP domain THMA_RS08675 PF02568 Thiamine biosynthesis protein (ThiI) THMA_RS08685 PF01478 Type IV leader peptidase family THMA_RS08685 PF06750 Bacterial Peptidase A24 N-terminal domain THMA_RS08690 PF10672 S-adenosylmethionine-dependent methyltransferase THMA_RS08690 PF17785 PUA-like domain THMA_RS08695 PF00155 Aminotransferase class I and II THMA_RS08710 PF01554 MatE THMA_RS08720 PF00884 Sulfatase THMA_RS08730 PF01336 OB-fold nucleic acid binding domain THMA_RS08730 PF00152 tRNA synthetases class II (D, K and N) THMA_RS08735 PF03449 Transcription elongation factor, N-terminal THMA_RS08735 PF01272 Transcription elongation factor, GreA/GreB, C-term THMA_RS08740 PF03477 ATP cone domain THMA_RS08745 PF02650 WhiA C-terminal HTH domain THMA_RS08745 PF14527 WhiA LAGLIDADG-like domain THMA_RS08750 PF01933 Uncharacterised protein family UPF0052 THMA_RS08755 PF03668 P-loop ATPase protein family THMA_RS08770 PF01205 Uncharacterized protein family UPF0029 THMA_RS08770 PF09186 Domain of unknown function (DUF1949) THMA_RS08775 PF01565 FAD binding domain THMA_RS08775 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain THMA_RS08780 PF04055 Radical SAM superfamily THMA_RS08790 PF03193 RsgA GTPase THMA_RS08790 PF16745 RsgA N-terminal domain THMA_RS08795 PF00834 Ribulose-phosphate 3 epimerase family THMA_RS08800 PF01624 MutS domain I THMA_RS08800 PF05188 MutS domain II THMA_RS08800 PF00488 MutS domain V THMA_RS08800 PF05192 MutS domain III THMA_RS08800 PF05190 MutS family domain IV THMA_RS08805 PF13673 Acetyltransferase (GNAT) domain THMA_RS08820 PF01979 Amidohydrolase family THMA_RS08830 PF01813 ATP synthase subunit D THMA_RS08835 PF01411 tRNA synthetases class II (A) THMA_RS08835 PF02272 DHHA1 domain THMA_RS08835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THMA_RS08845 PF02548 Ketopantoate hydroxymethyltransferase THMA_RS08855 PF05496 Holliday junction DNA helicase RuvB P-loop domain THMA_RS08855 PF17864 RuvB AAA lid domain THMA_RS08855 PF05491 RuvB C-terminal winged helix domain THMA_RS08860 PF01168 Alanine racemase, N-terminal domain THMA_RS08865 PF02325 YGGT family THMA_RS08870 PF01513 ATP-NAD kinase THMA_RS08875 PF01895 PhoU domain THMA_RS08885 PF00772 DnaB-like helicase N terminal domain THMA_RS08885 PF03796 DnaB-like helicase C terminal domain THMA_RS08890 PF01048 Phosphorylase superfamily THMA_RS08895 PF02535 ZIP Zinc transporter THMA_RS08905 PF00636 Ribonuclease III domain THMA_RS08910 PF08032 RNA 2'-O ribose methyltransferase substrate binding THMA_RS08910 PF00588 SpoU rRNA Methylase family THMA_RS08915 PF13344 Haloacid dehalogenase-like hydrolase THMA_RS08920 PF00248 Aldo/keto reductase family THMA_RS08925 PF01212 Beta-eliminating lyase THMA_RS08935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THMA_RS08940 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS08945 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS08945 PF12911 N-terminal TM domain of oligopeptide transport permease C THMA_RS08950 PF00005 ABC transporter THMA_RS08950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS08955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THMA_RS08955 PF00005 ABC transporter THMA_RS08960 PF03425 Carbohydrate binding domain (family 11) THMA_RS08960 PF00150 Cellulase (glycosyl hydrolase family 5) THMA_RS08960 PF00404 Dockerin type I domain THMA_RS08970 PF02151 UvrB/uvrC motif THMA_RS08970 PF12344 Ultra-violet resistance protein B THMA_RS08970 PF00271 Helicase conserved C-terminal domain THMA_RS08970 PF17757 UvrB interaction domain THMA_RS08970 PF04851 Type III restriction enzyme, res subunit THMA_RS08975 PF00871 Acetokinase family THMA_RS08980 PF01515 Phosphate acetyl/butaryl transferase THMA_RS08985 PF00871 Acetokinase family THMA_RS09020 PF17757 UvrB interaction domain THMA_RS09020 PF12344 Ultra-violet resistance protein B THMA_RS09020 PF02151 UvrB/uvrC motif THMA_RS09020 PF04851 Type III restriction enzyme, res subunit THMA_RS09020 PF00271 Helicase conserved C-terminal domain THMA_RS09025 PF13292 1-deoxy-D-xylulose-5-phosphate synthase THMA_RS09025 PF02779 Transketolase, pyrimidine binding domain THMA_RS09025 PF02780 Transketolase, C-terminal domain THMA_RS09030 PF09285 Elongation factor P, C-terminal THMA_RS09030 PF01132 Elongation factor P (EF-P) OB domain THMA_RS09030 PF08207 Elongation factor P (EF-P) KOW-like domain THMA_RS09040 PF01029 NusB family THMA_RS09045 PF01268 Formate--tetrahydrofolate ligase THMA_RS09050 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THMA_RS09050 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain THMA_RS09055 PF02601 Exonuclease VII, large subunit THMA_RS09055 PF13742 OB-fold nucleic acid binding domain THMA_RS09060 PF02609 Exonuclease VII small subunit THMA_RS09065 PF02779 Transketolase, pyrimidine binding domain THMA_RS09065 PF02780 Transketolase, C-terminal domain THMA_RS09065 PF13292 1-deoxy-D-xylulose-5-phosphate synthase THMA_RS09075 PF13684 Dihydroxyacetone kinase family THMA_RS09075 PF02734 DAK2 domain THMA_RS09085 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase THMA_RS09085 PF01676 Metalloenzyme superfamily THMA_RS09095 PF01475 Ferric uptake regulator family THMA_RS09100 PF00575 S1 RNA binding domain THMA_RS09100 PF08529 NusA N-terminal domain THMA_RS09100 PF13184 NusA-like KH domain THMA_RS09105 PF17384 RimP C-terminal SH3 domain THMA_RS09105 PF02576 RimP N-terminal domain THMA_RS09115 PF00764 Arginosuccinate synthase THMA_RS09120 PF00206 Lyase THMA_RS09125 PF01118 Semialdehyde dehydrogenase, NAD binding domain THMA_RS09125 PF02774 Semialdehyde dehydrogenase, dimerisation domain THMA_RS09130 PF01960 ArgJ family THMA_RS09135 PF00696 Amino acid kinase family THMA_RS09140 PF00202 Aminotransferase class-III THMA_RS09160 PF03707 Bacterial signalling protein N terminal repeat THMA_RS09160 PF00990 Diguanylate cyclase, GGDEF domain THMA_RS09160 PF00563 EAL domain THMA_RS09180 PF09701 CRISPR-associated protein (Cas_Cmr5) THMA_RS09205 PF09827 CRISPR associated protein Cas2 THMA_RS09210 PF01867 CRISPR associated protein Cas1 THMA_RS09220 PF00270 DEAD/DEAH box helicase THMA_RS09220 PF18019 HD domain THMA_RS09220 PF18395 Cas3 C-terminal domain THMA_RS09240 PF00684 DnaJ central domain THMA_RS09240 PF01556 DnaJ C terminal domain THMA_RS09240 PF00226 DnaJ domain THMA_RS09260 PF03787 RAMP superfamily THMA_RS09270 PF03787 RAMP superfamily THMA_RS09280 PF18211 Csm1 subunit domain B THMA_RS09305 PF08264 Anticodon-binding domain of tRNA THMA_RS09305 PF10458 Valyl tRNA synthetase tRNA binding arm THMA_RS09305 PF00133 tRNA synthetases class I (I, L, M and V) THMA_RS09310 PF02417 Chromate transporter THMA_RS09320 PF00958 GMP synthase C terminal domain THMA_RS09320 PF00117 Glutamine amidotransferase class-I THMA_RS09320 PF02568 Thiamine biosynthesis protein (ThiI) THMA_RS09330 PF01145 SPFH domain / Band 7 family THMA_RS09330 PF12221 Bacterial membrane protein N terminal THMA_RS09335 PF01145 SPFH domain / Band 7 family THMA_RS09345 PF00885 6,7-dimethyl-8-ribityllumazine synthase THMA_RS09350 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase THMA_RS09350 PF00925 GTP cyclohydrolase II THMA_RS09355 PF00677 Lumazine binding domain THMA_RS09360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THMA_RS09360 PF01872 RibD C-terminal domain THMA_RS09365 PF00990 Diguanylate cyclase, GGDEF domain THMA_RS09365 PF08448 PAS fold THMA_RS09380 PF00672 HAMP domain THMA_RS09380 PF00211 Adenylate and Guanylate cyclase catalytic domain THMA_RS09380 PF02743 Cache domain THMA_RS09385 PF11975 Family 4 glycosyl hydrolase C-terminal domain THMA_RS09385 PF02056 Family 4 glycosyl hydrolase THMA_RS09390 PF00128 Alpha amylase, catalytic domain THMA_RS09395 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS09400 PF14785 Maltose transport system permease protein MalF P2 domain THMA_RS09400 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS09405 PF01547 Bacterial extracellular solute-binding protein THMA_RS09410 PF00128 Alpha amylase, catalytic domain THMA_RS09435 PF03714 Bacterial pullanase-associated domain THMA_RS09435 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THMA_RS09435 PF00128 Alpha amylase, catalytic domain THMA_RS09445 PF01325 Iron dependent repressor, N-terminal DNA binding domain THMA_RS09445 PF00480 ROK family THMA_RS09450 PF00005 ABC transporter THMA_RS09455 PF02653 Branched-chain amino acid transport system / permease component THMA_RS09460 PF13407 Periplasmic binding protein domain THMA_RS09465 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS09470 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS09475 PF01547 Bacterial extracellular solute-binding protein THMA_RS09480 PF00232 Glycosyl hydrolase family 1 THMA_RS09485 PF06165 Glycosyltransferase family 36 THMA_RS09485 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain THMA_RS09510 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS09515 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS09525 PF00356 Bacterial regulatory proteins, lacI family THMA_RS09530 PF00013 KH domain THMA_RS09530 PF01966 HD domain THMA_RS09530 PF12072 Domain of unknown function (DUF3552) THMA_RS09535 PF02631 RecX family THMA_RS09540 PF00154 recA bacterial DNA recombination protein THMA_RS09550 PF01066 CDP-alcohol phosphatidyltransferase THMA_RS09555 PF18693 TRAM domain THMA_RS09555 PF00919 Uncharacterized protein family UPF0004 THMA_RS09555 PF04055 Radical SAM superfamily THMA_RS09570 PF04493 Endonuclease V THMA_RS09580 PF00056 lactate/malate dehydrogenase, NAD binding domain THMA_RS09580 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain THMA_RS09585 PF02361 Cobalt transport protein THMA_RS09590 PF05362 Lon protease (S16) C-terminal proteolytic domain THMA_RS09590 PF13654 AAA domain THMA_RS09595 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THMA_RS09605 PF01894 Uncharacterised protein family UPF0047 THMA_RS09610 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THMA_RS09610 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THMA_RS09615 PF00313 'Cold-shock' DNA-binding domain THMA_RS09620 PF00749 tRNA synthetases class I (E and Q), catalytic domain THMA_RS09625 PF12850 Calcineurin-like phosphoesterase superfamily domain THMA_RS09635 PF00149 Calcineurin-like phosphoesterase THMA_RS09635 PF02872 5'-nucleotidase, C-terminal domain THMA_RS09690 PF01252 Signal peptidase (SPase) II THMA_RS09705 PF00528 Binding-protein-dependent transport system inner membrane component THMA_RS09725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THMA_RS09725 PF08447 PAS fold THMA_RS09725 PF13426 PAS domain THMA_RS09795 PF03652 Holliday junction resolvase