CTN_RS00005	SM00530	Helix-turn-helix XRE-family like proteins 
CTN_RS00020	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS00025	SM00155	Phospholipase D. Active site motifs.
CTN_RS00070	SM00634	Bacterial Ig-like domain (group 1)
CTN_RS00115	SM00047	Lysozyme subfamily 2
CTN_RS00200	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00215	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
CTN_RS00240	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS00255	SM00849	Metallo-beta-lactamase superfamily
CTN_RS00280	SM00529	Helix-turn-helix diphteria tox regulatory element
CTN_RS00295	SM00481	DNA polymerase alpha chain like domain
CTN_RS00320	SM00062	Bacterial periplasmic substrate-binding proteins
CTN_RS00320	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CTN_RS00330	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00355	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTN_RS00355	SM01131	CTN_RS00355
CTN_RS00375	SM00984	UDP binding domain
CTN_RS00380	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS00390	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00395	SM00977	TilS substrate C-terminal domain
CTN_RS00415	SM00479	CTN_RS00415
CTN_RS00415	SM00481	DNA polymerase alpha chain like domain
CTN_RS00440	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CTN_RS00445	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00445	SM00962	SRP54-type protein, GTPase domain
CTN_RS00445	SM00963	SRP54-type protein, helical bundle domain
CTN_RS00450	SM00028	Tetratricopeptide repeats
CTN_RS00455	SM00257	Lysin motif
CTN_RS00515	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CTN_RS00520	SM00851	MGS-like domain
CTN_RS00520	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CTN_RS00525	SM01329	CTN_RS00525
CTN_RS00540	SM00917	LeuA allosteric (dimerisation) domain
CTN_RS00545	SM00917	LeuA allosteric (dimerisation) domain
CTN_RS00585	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00595	SM00919	Malic enzyme, NAD binding domain
CTN_RS00595	SM01274	CTN_RS00595
CTN_RS00665	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00710	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00710	SM01086	C-terminal, D2-small domain, of ClpB protein
CTN_RS00745	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS00755	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00765	SM00986	Uracil DNA glycosylase superfamily
CTN_RS00765	SM00987	UreE urease accessory protein, C-terminal domain 
CTN_RS00770	SM00529	Helix-turn-helix diphteria tox regulatory element
CTN_RS00780	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00780	SM00506	Appr-1"-p processing enzyme
CTN_RS00805	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00810	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00820	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00830	SM00479	CTN_RS00830
CTN_RS00835	SM00670	Large family of predicted nucleotide-binding domains
CTN_RS00895	SM00382	ATPases associated with a variety of cellular activities
CTN_RS00935	SM00363	S4 RNA-binding domain
CTN_RS00990	SM00448	cheY-homologous receiver domain
CTN_RS00995	SM00331	Sigma factor PP2C-like phosphatases
CTN_RS01010	SM00138	Methyltransferase, chemotaxis proteins 
CTN_RS01015	SM00363	S4 RNA-binding domain
CTN_RS01020	SM00481	DNA polymerase alpha chain like domain
CTN_RS01030	SM00663	RNA polymerase I subunit A N-terminus
CTN_RS01055	SM00649	Ribosomal protein L11/L12
CTN_RS01060	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CTN_RS01060	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CTN_RS01110	SM01001	AIR carboxylase
CTN_RS01135	SM00822	CTN_RS01135
CTN_RS01145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTN_RS01145	SM00895	CTN_RS01145
CTN_RS01150	SM01350	CTN_RS01150
CTN_RS01170	SM00382	ATPases associated with a variety of cellular activities
CTN_RS01185	SM00849	Metallo-beta-lactamase superfamily
CTN_RS01190	SM00382	ATPases associated with a variety of cellular activities
CTN_RS01225	SM00382	ATPases associated with a variety of cellular activities
CTN_RS01265	SM00829	Enoylreductase
CTN_RS01280	SM00257	Lysin motif
CTN_RS01285	SM00448	cheY-homologous receiver domain
CTN_RS01310	SM00938	Nitrogen regulatory protein P-II
CTN_RS01325	SM00387	Histidine kinase-like ATPases
CTN_RS01325	SM00388	His Kinase A (phosphoacceptor) domain
CTN_RS01330	SM00448	cheY-homologous receiver domain
CTN_RS01330	SM00862	Transcriptional regulatory protein, C terminal
CTN_RS01385	SM00382	ATPases associated with a variety of cellular activities
CTN_RS01425	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS01425	SM00876	Biotin and Thiamin Synthesis associated domain
CTN_RS01440	SM00518	AP endonuclease family 2
CTN_RS01450	SM00642	Alpha-amylase domain
CTN_RS01460	SM00478	endonuclease III
CTN_RS01460	SM00525	CTN_RS01460
CTN_RS01515	SM00382	ATPases associated with a variety of cellular activities
CTN_RS01550	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CTN_RS01550	SM00478	endonuclease III
CTN_RS01630	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS01655	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CTN_RS01750	SM00746	metallochaperone-like domain
CTN_RS01785	SM00382	ATPases associated with a variety of cellular activities
CTN_RS01810	SM00382	ATPases associated with a variety of cellular activities
CTN_RS01825	SM00829	Enoylreductase
CTN_RS01835	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTN_RS01835	SM00866	CTN_RS01835
CTN_RS01885	SM00812	Alpha-L-fucosidase
CTN_RS01890	SM01133	CTN_RS01890
CTN_RS01920	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CTN_RS01950	SM00382	ATPases associated with a variety of cellular activities
CTN_RS01955	SM00382	ATPases associated with a variety of cellular activities
CTN_RS01975	SM01007	Class II Aldolase and Adducin N-terminal domain
CTN_RS01985	SM00813	Alpha-L-arabinofuranosidase C-terminus
CTN_RS02015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTN_RS02050	SM01018	B12 binding domain
CTN_RS02060	SM00411	bacterial (prokaryotic) histone like domain
CTN_RS02065	SM00465	GIY-YIG type nucleases (URI domain)
CTN_RS02070	SM00363	S4 RNA-binding domain
CTN_RS02075	SM01228	CTN_RS02075
CTN_RS02080	SM00480	DNA polymerase III beta subunit
CTN_RS02100	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CTN_RS02100	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CTN_RS02100	SM00493	CTN_RS02100
CTN_RS02105	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS02160	SM00900	CTN_RS02160
CTN_RS02175	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS02250	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CTN_RS02275	SM00363	S4 RNA-binding domain
CTN_RS02280	SM00382	ATPases associated with a variety of cellular activities
CTN_RS02300	SM00382	ATPases associated with a variety of cellular activities
CTN_RS02365	SM00487	DEAD-like helicases superfamily
CTN_RS02365	SM00490	helicase superfamily c-terminal domain
CTN_RS02370	SM00382	ATPases associated with a variety of cellular activities
CTN_RS02385	SM00902	Iron hydrogenase small subunit
CTN_RS02385	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CTN_RS02395	SM00382	ATPases associated with a variety of cellular activities
CTN_RS02400	SM00382	ATPases associated with a variety of cellular activities
CTN_RS02400	SM01086	C-terminal, D2-small domain, of ClpB protein
CTN_RS02430	SM00382	ATPases associated with a variety of cellular activities
CTN_RS02480	SM00382	ATPases associated with a variety of cellular activities
CTN_RS02505	SM00448	cheY-homologous receiver domain
CTN_RS02505	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS02525	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS02570	SM00487	DEAD-like helicases superfamily
CTN_RS02570	SM00490	helicase superfamily c-terminal domain
CTN_RS02595	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CTN_RS02595	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CTN_RS02595	SM00487	DEAD-like helicases superfamily
CTN_RS02595	SM00493	CTN_RS02595
CTN_RS02600	SM00996	S-adenosyl-L-homocysteine hydrolase
CTN_RS02600	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CTN_RS02615	SM00881	CoA binding domain
CTN_RS02635	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CTN_RS02680	SM00903	Flavin reductase like domain
CTN_RS02685	SM00098	Alkaline phosphatase homologues
CTN_RS02690	SM00830	Chorismate mutase type II
CTN_RS02730	SM00382	ATPases associated with a variety of cellular activities
CTN_RS02730	SM00994	ClpX C4-type zinc finger
CTN_RS02730	SM01086	C-terminal, D2-small domain, of ClpB protein
CTN_RS02740	SM00834	Putative regulatory protein
CTN_RS02755	SM00267	diguanylate cyclase
CTN_RS02755	SM00448	cheY-homologous receiver domain
CTN_RS02795	SM00849	Metallo-beta-lactamase superfamily
CTN_RS02830	SM00387	Histidine kinase-like ATPases
CTN_RS02835	SM00448	cheY-homologous receiver domain
CTN_RS02835	SM00862	Transcriptional regulatory protein, C terminal
CTN_RS02845	SM00382	ATPases associated with a variety of cellular activities
CTN_RS02890	SM00382	ATPases associated with a variety of cellular activities
CTN_RS02915	SM00419	helix_turn_helix, cAMP Regulatory protein
CTN_RS02950	SM00382	ATPases associated with a variety of cellular activities
CTN_RS02965	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CTN_RS02965	SM00292	breast cancer carboxy-terminal domain
CTN_RS02965	SM00532	Ligase N family
CTN_RS03075	SM00382	ATPases associated with a variety of cellular activities
CTN_RS03085	SM01217	CTN_RS03085
CTN_RS03095	SM00382	ATPases associated with a variety of cellular activities
CTN_RS03100	SM00382	ATPases associated with a variety of cellular activities
CTN_RS03120	SM00633	Glycosyl hydrolase family 10
CTN_RS03145	SM00346	helix_turn_helix isocitrate lyase regulation
CTN_RS03160	SM00633	Glycosyl hydrolase family 10
CTN_RS03180	SM00382	ATPases associated with a variety of cellular activities
CTN_RS03185	SM00382	ATPases associated with a variety of cellular activities
CTN_RS03220	SM00899	CTN_RS03220
CTN_RS03240	SM00382	ATPases associated with a variety of cellular activities
CTN_RS03275	SM00382	ATPases associated with a variety of cellular activities
CTN_RS03330	SM00382	ATPases associated with a variety of cellular activities
CTN_RS03335	SM00382	ATPases associated with a variety of cellular activities
CTN_RS03345	SM01217	CTN_RS03345
CTN_RS03355	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CTN_RS03355	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTN_RS03360	SM00853	MutL C terminal dimerisation domain
CTN_RS03360	SM01340	CTN_RS03360
CTN_RS03400	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CTN_RS03405	SM00849	Metallo-beta-lactamase superfamily
CTN_RS03420	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CTN_RS03440	SM00460	Transglutaminase/protease-like homologues
CTN_RS03445	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CTN_RS03490	SM00271	DnaJ molecular chaperone homology domain
CTN_RS03525	SM00490	helicase superfamily c-terminal domain
CTN_RS03545	SM00267	diguanylate cyclase
CTN_RS03565	SM00387	Histidine kinase-like ATPases
CTN_RS03575	SM00382	ATPases associated with a variety of cellular activities
CTN_RS03615	SM00448	cheY-homologous receiver domain
CTN_RS03615	SM00862	Transcriptional regulatory protein, C terminal
CTN_RS03620	SM00091	PAS domain
CTN_RS03620	SM00387	Histidine kinase-like ATPases
CTN_RS03620	SM00388	His Kinase A (phosphoacceptor) domain
CTN_RS03625	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CTN_RS03635	SM00838	Elongation factor G C-terminus
CTN_RS03635	SM00889	Elongation factor G, domain IV
CTN_RS03640	SM00642	Alpha-amylase domain
CTN_RS03650	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS03710	SM00478	endonuclease III
CTN_RS03715	SM00244	prohibitin homologues
CTN_RS03720	SM00244	prohibitin homologues
CTN_RS03755	SM00642	Alpha-amylase domain
CTN_RS03770	SM00948	Proteasome subunit A N-terminal signature  Add an annotation
CTN_RS03775	SM00642	Alpha-amylase domain
CTN_RS03795	SM01065	Starch binding domain
CTN_RS03800	SM00642	Alpha-amylase domain
CTN_RS03805	SM00320	WD40 repeats
CTN_RS03805	SM00564	beta-propeller repeat
CTN_RS03815	SM00382	ATPases associated with a variety of cellular activities
CTN_RS03855	SM01068	Putative carbohydrate binding domain
CTN_RS03870	SM00872	Alpha mannosidase, middle domain
CTN_RS03895	SM00354	helix_turn _helix lactose operon repressor
CTN_RS03900	SM00322	K homology RNA-binding domain
CTN_RS03900	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS03910	SM00382	ATPases associated with a variety of cellular activities
CTN_RS03925	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS03985	SM00357	Cold shock protein domain
CTN_RS04055	SM00382	ATPases associated with a variety of cellular activities
CTN_RS04055	SM00464	Found in ATP-dependent protease La (LON)
CTN_RS04080	SM01400	CTN_RS04080
CTN_RS04125	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CTN_RS04125	SM00474	3'-5' exonuclease
CTN_RS04125	SM00475	5'-3' exonuclease
CTN_RS04125	SM00482	DNA polymerase A domain
CTN_RS04175	SM00382	ATPases associated with a variety of cellular activities
CTN_RS04195	SM00316	Ribosomal protein S1-like RNA-binding domain
CTN_RS04220	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS04255	SM00267	diguanylate cyclase
CTN_RS04295	SM00357	Cold shock protein domain
CTN_RS04305	SM00316	Ribosomal protein S1-like RNA-binding domain
CTN_RS04310	SM00257	Lysin motif
CTN_RS04320	SM01409	CTN_RS04320
CTN_RS04325	SM00072	Guanylate kinase homologues.
CTN_RS04325	SM00382	ATPases associated with a variety of cellular activities
CTN_RS04345	SM00563	Phosphate acyltransferases
CTN_RS04350	SM00981	CTN_RS04350
CTN_RS04355	SM00028	Tetratricopeptide repeats
CTN_RS04365	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CTN_RS04375	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS04455	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS04460	SM00740	CTN_RS04460
CTN_RS04475	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CTN_RS04475	SM00534	ATPase domain of DNA mismatch repair MUTS family
CTN_RS04500	SM00822	CTN_RS04500
CTN_RS04555	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CTN_RS04575	SM00382	ATPases associated with a variety of cellular activities
CTN_RS04605	SM00382	ATPases associated with a variety of cellular activities
CTN_RS04625	SM00535	Ribonuclease III family
CTN_RS04630	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CTN_RS04695	SM00487	DEAD-like helicases superfamily
CTN_RS04695	SM00490	helicase superfamily c-terminal domain
CTN_RS04700	SM00861	Transketolase, pyrimidine binding domain
CTN_RS04705	SM00841	Elongation factor P, C-terminal
CTN_RS04705	SM01185	CTN_RS04705
CTN_RS04740	SM00861	Transketolase, pyrimidine binding domain
CTN_RS04750	SM01120	CTN_RS04750
CTN_RS04750	SM01121	CTN_RS04750
CTN_RS04755	SM00028	Tetratricopeptide repeats
CTN_RS04775	SM00316	Ribosomal protein S1-like RNA-binding domain
CTN_RS04795	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CTN_RS04805	SM01130	CTN_RS04805
CTN_RS04870	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS04895	SM00838	Elongation factor G C-terminus
CTN_RS04895	SM00889	Elongation factor G, domain IV
CTN_RS04905	SM01403	CTN_RS04905
CTN_RS04925	SM01382	CTN_RS04925
CTN_RS04925	SM01383	CTN_RS04925
CTN_RS04940	SM00322	K homology RNA-binding domain
CTN_RS04960	SM01374	CTN_RS04960
CTN_RS04965	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CTN_RS05025	SM00316	Ribosomal protein S1-like RNA-binding domain
CTN_RS05045	SM00363	S4 RNA-binding domain
CTN_RS05045	SM01390	CTN_RS05045
CTN_RS05050	SM00662	RNA polymerases D
CTN_RS05060	SM00357	Cold shock protein domain
CTN_RS05060	SM00382	ATPases associated with a variety of cellular activities
CTN_RS05060	SM00959	Rho termination factor, N-terminal domain
CTN_RS05080	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS05110	SM01234	CTN_RS05110
CTN_RS05120	SM00393	Putative single-stranded nucleic acids-binding domain
CTN_RS05120	SM01245	CTN_RS05120
CTN_RS05160	SM00400	zinc finger
CTN_RS05160	SM00493	CTN_RS05160
CTN_RS05170	SM00487	DEAD-like helicases superfamily
CTN_RS05170	SM00490	helicase superfamily c-terminal domain
CTN_RS05170	SM00982	CTN_RS05170
CTN_RS05170	SM01058	CarD-like/TRCF domain
CTN_RS05175	SM00028	Tetratricopeptide repeats
CTN_RS05185	SM01207	CTN_RS05185
CTN_RS05195	SM00316	Ribosomal protein S1-like RNA-binding domain
CTN_RS05235	SM00650	Ribosomal RNA adenine dimethylases
CTN_RS05245	SM00881	CoA binding domain
CTN_RS05275	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CTN_RS05275	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTN_RS05275	SM01049	CTN_RS05275
CTN_RS05280	SM00881	CoA binding domain
CTN_RS05285	SM00902	Iron hydrogenase small subunit
CTN_RS05285	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CTN_RS05290	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CTN_RS05330	SM00382	ATPases associated with a variety of cellular activities
CTN_RS05350	SM00640	Glycosyl hydrolases family 32
CTN_RS05405	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS05420	SM00849	Metallo-beta-lactamase superfamily
CTN_RS05425	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS05480	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS05535	SM00893	Electron transfer flavoprotein domain
CTN_RS05540	SM00893	Electron transfer flavoprotein domain
CTN_RS05570	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS05590	SM00858	CTN_RS05590
CTN_RS05620	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS05645	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS05675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS05680	SM01133	CTN_RS05680
CTN_RS05710	SM00382	ATPases associated with a variety of cellular activities
CTN_RS05710	SM00962	SRP54-type protein, GTPase domain
CTN_RS05710	SM00963	SRP54-type protein, helical bundle domain
CTN_RS05750	SM00564	beta-propeller repeat
CTN_RS05765	SM00363	S4 RNA-binding domain
CTN_RS05775	SM00957	SecA DEAD-like domain
CTN_RS05775	SM00958	SecA preprotein cross-linking domain
CTN_RS05825	SM00267	diguanylate cyclase
CTN_RS05895	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CTN_RS05920	SM00382	ATPases associated with a variety of cellular activities
CTN_RS05950	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CTN_RS05975	SM00382	ATPases associated with a variety of cellular activities
CTN_RS05975	SM01086	C-terminal, D2-small domain, of ClpB protein
CTN_RS06060	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06075	SM00855	Phosphoglycerate mutase family
CTN_RS06105	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06135	SM00937	CTN_RS06135
CTN_RS06140	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06150	SM00448	cheY-homologous receiver domain
CTN_RS06155	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CTN_RS06155	SM00091	PAS domain
CTN_RS06155	SM00387	Histidine kinase-like ATPases
CTN_RS06155	SM00388	His Kinase A (phosphoacceptor) domain
CTN_RS06180	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTN_RS06190	SM00481	DNA polymerase alpha chain like domain
CTN_RS06215	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTN_RS06215	SM01240	CTN_RS06215
CTN_RS06225	SM00316	Ribosomal protein S1-like RNA-binding domain
CTN_RS06225	SM00322	K homology RNA-binding domain
CTN_RS06230	SM01387	CTN_RS06230
CTN_RS06270	SM00530	Helix-turn-helix XRE-family like proteins 
CTN_RS06285	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06295	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS06300	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS06315	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06340	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06345	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06355	SM00530	Helix-turn-helix XRE-family like proteins 
CTN_RS06375	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06400	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06435	SM00849	Metallo-beta-lactamase superfamily
CTN_RS06475	SM00463	Small MutS-related domain
CTN_RS06475	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CTN_RS06475	SM00534	ATPase domain of DNA mismatch repair MUTS family
CTN_RS06480	SM00842	Cell division protein FtsA
CTN_RS06485	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06500	SM00845	GatB domain
CTN_RS06515	SM00633	Glycosyl hydrolase family 10
CTN_RS06525	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS06525	SM00876	Biotin and Thiamin Synthesis associated domain
CTN_RS06535	SM00876	Biotin and Thiamin Synthesis associated domain
CTN_RS06545	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06565	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06575	SM00448	cheY-homologous receiver domain
CTN_RS06575	SM00862	Transcriptional regulatory protein, C terminal
CTN_RS06580	SM00387	Histidine kinase-like ATPases
CTN_RS06580	SM00388	His Kinase A (phosphoacceptor) domain
CTN_RS06590	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06620	SM01209	CTN_RS06620
CTN_RS06620	SM01210	CTN_RS06620
CTN_RS06625	SM00798	AICARFT/IMPCHase bienzyme
CTN_RS06625	SM00851	MGS-like domain
CTN_RS06645	SM01211	CTN_RS06645
CTN_RS06705	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06710	SM00872	Alpha mannosidase, middle domain
CTN_RS06760	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06765	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06770	SM00354	helix_turn _helix lactose operon repressor
CTN_RS06840	SM00948	Proteasome subunit A N-terminal signature  Add an annotation
CTN_RS06860	SM00354	helix_turn _helix lactose operon repressor
CTN_RS06895	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06905	SM00382	ATPases associated with a variety of cellular activities
CTN_RS06955	SM00834	Putative regulatory protein
CTN_RS06960	SM00851	MGS-like domain
CTN_RS06965	SM00091	PAS domain
CTN_RS06965	SM00267	diguanylate cyclase
CTN_RS06975	SM00968	SMC proteins Flexible Hinge Domain
CTN_RS07005	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CTN_RS07025	SM00100	Cyclic nucleotide-monophosphate binding domain
CTN_RS07025	SM00419	helix_turn_helix, cAMP Regulatory protein
CTN_RS07030	SM00062	Bacterial periplasmic substrate-binding proteins
CTN_RS07030	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS07050	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS07065	SM00267	diguanylate cyclase
CTN_RS07070	SM00849	Metallo-beta-lactamase superfamily
CTN_RS07075	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTN_RS07075	SM00924	MgtE intracellular N domain
CTN_RS07125	SM00382	ATPases associated with a variety of cellular activities
CTN_RS07130	SM00382	ATPases associated with a variety of cellular activities
CTN_RS07145	SM01329	CTN_RS07145
CTN_RS07160	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTN_RS07165	SM00382	ATPases associated with a variety of cellular activities
CTN_RS07170	SM00382	ATPases associated with a variety of cellular activities
CTN_RS07250	SM01043	Bacterial transcriptional activator domain
CTN_RS07330	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS07335	SM00358	Double-stranded RNA binding motif
CTN_RS07335	SM00535	Ribonuclease III family
CTN_RS07360	SM00788	Adenylosuccinate synthetase
CTN_RS07365	SM00998	Adenylosuccinate lyase C-terminus
CTN_RS07375	SM00836	DALR anticodon binding domain
CTN_RS07375	SM01016	Arginyl tRNA synthetase N terminal dom
CTN_RS07425	SM00434	DNA Topoisomerase IV
CTN_RS07485	SM01007	Class II Aldolase and Adducin N-terminal domain
CTN_RS07500	SM00420	helix_turn_helix, Deoxyribose operon repressor
CTN_RS07500	SM01134	CTN_RS07500
CTN_RS07560	SM00382	ATPases associated with a variety of cellular activities
CTN_RS07565	SM00935	Outer membrane protein (OmpH-like)
CTN_RS07570	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CTN_RS07715	SM00858	CTN_RS07715
CTN_RS07750	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTN_RS07765	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CTN_RS07765	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTN_RS07810	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CTN_RS07855	SM00342	helix_turn_helix, arabinose operon control protein
CTN_RS07890	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CTN_RS07920	SM00487	DEAD-like helicases superfamily
CTN_RS07920	SM00490	helicase superfamily c-terminal domain
CTN_RS07950	SM01359	CTN_RS07950
CTN_RS07950	SM01360	CTN_RS07950
CTN_RS07980	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CTN_RS08005	SM00267	diguanylate cyclase
CTN_RS08030	SM01001	AIR carboxylase
CTN_RS08075	SM00382	ATPases associated with a variety of cellular activities
CTN_RS08090	SM00861	Transketolase, pyrimidine binding domain
CTN_RS08110	SM00354	helix_turn _helix lactose operon repressor
CTN_RS08140	SM01230	CTN_RS08140
CTN_RS08160	SM00363	S4 RNA-binding domain
CTN_RS08185	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTN_RS08210	SM00382	ATPases associated with a variety of cellular activities
CTN_RS08230	SM00382	ATPases associated with a variety of cellular activities
CTN_RS08230	SM00760	Bacterial dnaA protein helix-turn-helix domain
CTN_RS08270	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CTN_RS08270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CTN_RS08325	SM00382	ATPases associated with a variety of cellular activities
CTN_RS08325	SM00962	SRP54-type protein, GTPase domain
CTN_RS08390	SM00849	Metallo-beta-lactamase superfamily
CTN_RS08400	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTN_RS08410	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CTN_RS08420	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CTN_RS08440	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS08475	SM01192	CTN_RS08475
CTN_RS08475	SM01193	CTN_RS08475
CTN_RS08495	SM00382	ATPases associated with a variety of cellular activities
CTN_RS08495	SM01086	C-terminal, D2-small domain, of ClpB protein
CTN_RS08510	SM00740	CTN_RS08510
CTN_RS08530	SM00244	prohibitin homologues
CTN_RS08565	SM01323	CTN_RS08565
CTN_RS08575	SM00904	Riboflavin kinase
CTN_RS08590	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS08595	SM00387	Histidine kinase-like ATPases
CTN_RS08595	SM00388	His Kinase A (phosphoacceptor) domain
CTN_RS08620	SM00271	DnaJ molecular chaperone homology domain
CTN_RS08640	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTN_RS08640	SM01091	Transporter associated domain
CTN_RS08650	SM01221	CTN_RS08650
CTN_RS08650	SM01222	CTN_RS08650
CTN_RS08655	SM00448	cheY-homologous receiver domain
CTN_RS08680	SM00382	ATPases associated with a variety of cellular activities
CTN_RS08685	SM00864	Tubulin/FtsZ family, GTPase domain
CTN_RS08685	SM00865	Tubulin/FtsZ family, C-terminal domain
CTN_RS08690	SM00842	Cell division protein FtsA
CTN_RS08700	SM00387	Histidine kinase-like ATPases
CTN_RS08700	SM00433	TopoisomeraseII
CTN_RS08715	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS08720	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTN_RS08735	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS08740	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS08750	SM00873	B3/4 domain
CTN_RS08750	SM00874	tRNA synthetase B5 domain
CTN_RS08750	SM00896	Ferredoxin-fold anticodon binding domain
CTN_RS08790	SM00347	helix_turn_helix multiple antibiotic resistance protein
CTN_RS08850	SM00481	DNA polymerase alpha chain like domain
CTN_RS08860	SM00825	Beta-ketoacyl synthase
CTN_RS08880	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CTN_RS08905	SM00382	ATPases associated with a variety of cellular activities
CTN_RS08950	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS09010	SM00729	Elongator protein 3, MiaB family, Radical SAM
CTN_RS09025	SM00642	Alpha-amylase domain
CTN_RS09030	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CTN_RS09090	SM00028	Tetratricopeptide repeats
CTN_RS09145	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CTN_RS09145	SM00245	tail specific protease
CTN_RS09180	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CTN_RS09185	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS09235	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CTN_RS09235	SM00954	Region found in RelA / SpoT proteins
CTN_RS09270	SM00316	Ribosomal protein S1-like RNA-binding domain
CTN_RS09270	SM00357	Cold shock protein domain
CTN_RS09270	SM00955	CTN_RS09270
CTN_RS09285	SM00840	CTN_RS09285
CTN_RS09290	SM00260	Two component signalling adaptor domain
CTN_RS09310	SM00116	Domain in cystathionine beta-synthase and other proteins.
CTN_RS09335	SM00347	helix_turn_helix multiple antibiotic resistance protein
CTN_RS09360	SM00382	ATPases associated with a variety of cellular activities
CTN_RS09370	SM00852	Probable molybdopterin binding domain
CTN_RS09375	SM00073	Histidine Phosphotransfer domain
CTN_RS09375	SM00260	Two component signalling adaptor domain
CTN_RS09375	SM00387	Histidine kinase-like ATPases
CTN_RS09375	SM01231	CTN_RS09375
CTN_RS09380	SM00260	Two component signalling adaptor domain
CTN_RS09385	SM00448	cheY-homologous receiver domain
CTN_RS09450	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CTN_RS09460	SM00382	ATPases associated with a variety of cellular activities
CTN_RS09485	SM00849	Metallo-beta-lactamase superfamily
CTN_RS09570	SM00465	GIY-YIG type nucleases (URI domain)
CTN_RS09625	SM00965	Secretin and TonB N terminus short domain
CTN_RS09630	SM00965	Secretin and TonB N terminus short domain
CTN_RS09645	SM01043	Bacterial transcriptional activator domain
CTN_RS09655	SM01207	CTN_RS09655
