locus-tag class description TRQ2_RS00005 PF00308 Bacterial dnaA protein TRQ2_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix TRQ2_RS00005 PF11638 DnaA N-terminal domain TRQ2_RS00010 PF02390 Putative methyltransferase TRQ2_RS00025 PF01256 Carbohydrate kinase TRQ2_RS00025 PF03853 YjeF-related protein N-terminus TRQ2_RS00030 PF01464 Transglycosylase SLT domain TRQ2_RS00035 PF00465 Iron-containing alcohol dehydrogenase TRQ2_RS00045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRQ2_RS00050 PF01384 Phosphate transporter family TRQ2_RS00060 PF01351 Ribonuclease HII TRQ2_RS00065 PF01865 Protein of unknown function DUF47 TRQ2_RS00070 PF03819 MazG nucleotide pyrophosphohydrolase domain TRQ2_RS00075 PF13145 PPIC-type PPIASE domain TRQ2_RS00080 PF01008 Initiation factor 2 subunit family TRQ2_RS00085 PF01311 Bacterial export proteins, family 1 TRQ2_RS00090 PF01312 FlhB HrpN YscU SpaS Family TRQ2_RS00095 PF00771 FHIPEP family TRQ2_RS00100 PF00448 SRP54-type protein, GTPase domain TRQ2_RS00105 PF10609 NUBPL iron-transfer P-loop NTPase TRQ2_RS00115 PF04509 CheC-like family TRQ2_RS00120 PF03975 CheD chemotactic sensory transduction TRQ2_RS00125 PF04542 Sigma-70 region 2 TRQ2_RS00125 PF04539 Sigma-70 region 3 TRQ2_RS00125 PF04545 Sigma-70, region 4 TRQ2_RS00150 PF04232 Stage V sporulation protein S (SpoVS) TRQ2_RS00155 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain TRQ2_RS00155 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain TRQ2_RS00160 PF08323 Starch synthase catalytic domain TRQ2_RS00160 PF00534 Glycosyl transferases group 1 TRQ2_RS00170 PF02673 Bacitracin resistance protein BacA TRQ2_RS00175 PF03448 MgtE intracellular N domain TRQ2_RS00175 PF00571 CBS domain TRQ2_RS00175 PF01769 Divalent cation transporter TRQ2_RS00180 PF04551 GcpE protein TRQ2_RS00185 PF17820 PDZ domain TRQ2_RS00185 PF02163 Peptidase family M50 TRQ2_RS00190 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TRQ2_RS00190 PF13288 DXP reductoisomerase C-terminal domain TRQ2_RS00190 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TRQ2_RS00200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TRQ2_RS00200 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TRQ2_RS00205 PF00905 Penicillin binding protein transpeptidase domain TRQ2_RS00205 PF17092 Penicillin-binding protein OB-like domain TRQ2_RS00205 PF00912 Transglycosylase TRQ2_RS00220 PF03309 Type III pantothenate kinase TRQ2_RS00225 PF01053 Cys/Met metabolism PLP-dependent enzyme TRQ2_RS00230 PF04204 Homoserine O-succinyltransferase TRQ2_RS00235 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit TRQ2_RS00245 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TRQ2_RS00245 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TRQ2_RS00245 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TRQ2_RS00250 PF03952 Enolase, N-terminal domain TRQ2_RS00250 PF00113 Enolase, C-terminal TIM barrel domain TRQ2_RS00255 PF16916 Dimerisation domain of Zinc Transporter TRQ2_RS00255 PF01545 Cation efflux family TRQ2_RS00265 PF00814 Glycoprotease family TRQ2_RS00270 PF17871 AAA lid domain TRQ2_RS00270 PF07724 AAA domain (Cdc48 subfamily) TRQ2_RS00270 PF00004 ATPase family associated with various cellular activities (AAA) TRQ2_RS00270 PF10431 C-terminal, D2-small domain, of ClpB protein TRQ2_RS00270 PF02861 Clp amino terminal domain, pathogenicity island component TRQ2_RS00275 PF01795 MraW methylase family TRQ2_RS00285 PF00905 Penicillin binding protein transpeptidase domain TRQ2_RS00285 PF03717 Penicillin-binding Protein dimerisation domain TRQ2_RS00285 PF03793 PASTA domain TRQ2_RS00290 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRQ2_RS00295 PF13192 Thioredoxin domain TRQ2_RS00295 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRQ2_RS00305 PF01145 SPFH domain / Band 7 family TRQ2_RS00315 PF12706 Beta-lactamase superfamily domain TRQ2_RS00315 PF00753 Metallo-beta-lactamase superfamily TRQ2_RS00320 PF03948 Ribosomal protein L9, C-terminal domain TRQ2_RS00320 PF01281 Ribosomal protein L9, N-terminal domain TRQ2_RS00325 PF00483 Nucleotidyl transferase TRQ2_RS00330 PF02355 Protein export membrane protein TRQ2_RS00330 PF07549 SecD/SecF GG Motif TRQ2_RS00335 PF02355 Protein export membrane protein TRQ2_RS00335 PF07549 SecD/SecF GG Motif TRQ2_RS00340 PF02699 Preprotein translocase subunit TRQ2_RS00350 PF06574 FAD synthetase TRQ2_RS00350 PF01687 Riboflavin kinase TRQ2_RS00355 PF01472 PUA domain TRQ2_RS00355 PF16198 tRNA pseudouridylate synthase B C-terminal domain TRQ2_RS00355 PF01509 TruB family pseudouridylate synthase (N terminal domain) TRQ2_RS00360 PF02033 Ribosome-binding factor A TRQ2_RS00365 PF08668 HDOD domain TRQ2_RS00370 PF00672 HAMP domain TRQ2_RS00370 PF00512 His Kinase A (phospho-acceptor) domain TRQ2_RS00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRQ2_RS00370 PF13426 PAS domain TRQ2_RS00370 PF14827 Double sensory domain of two-component sensor kinase TRQ2_RS00375 PF01300 Telomere recombination TRQ2_RS00375 PF03481 Putative GTP-binding controlling metal-binding TRQ2_RS00385 PF01628 HrcA protein C terminal domain TRQ2_RS00390 PF01025 GrpE TRQ2_RS00395 PF00684 DnaJ central domain TRQ2_RS00395 PF01556 DnaJ C terminal domain TRQ2_RS00395 PF00226 DnaJ domain TRQ2_RS00400 PF01926 50S ribosome-binding GTPase TRQ2_RS00405 PF07650 KH domain TRQ2_RS00405 PF01926 50S ribosome-binding GTPase TRQ2_RS00410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TRQ2_RS00415 PF03471 Transporter associated domain TRQ2_RS00415 PF00571 CBS domain TRQ2_RS00420 PF02590 Predicted SPOUT methyltransferase TRQ2_RS00425 PF07837 Formiminotransferase domain, N-terminal subdomain TRQ2_RS00425 PF02971 Formiminotransferase domain TRQ2_RS00430 PF00072 Response regulator receiver domain TRQ2_RS00445 PF01098 Cell cycle protein TRQ2_RS00455 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TRQ2_RS00455 PF00437 Type II/IV secretion system protein TRQ2_RS00460 PF12327 FtsZ family, C-terminal domain TRQ2_RS00460 PF00091 Tubulin/FtsZ family, GTPase domain TRQ2_RS00465 PF11983 Membrane-attachment and polymerisation-promoting switch TRQ2_RS00465 PF02491 SHS2 domain inserted in FTSA TRQ2_RS00475 PF01751 Toprim domain TRQ2_RS00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRQ2_RS00475 PF00204 DNA gyrase B TRQ2_RS00475 PF00986 DNA gyrase B subunit, carboxyl terminus TRQ2_RS00485 PF01063 Amino-transferase class IV TRQ2_RS00490 PF04055 Radical SAM superfamily TRQ2_RS00490 PF00919 Uncharacterized protein family UPF0004 TRQ2_RS00500 PF00294 pfkB family carbohydrate kinase TRQ2_RS00505 PF00005 ABC transporter TRQ2_RS00505 PF08402 TOBE domain TRQ2_RS00510 PF04055 Radical SAM superfamily TRQ2_RS00510 PF06463 Molybdenum Cofactor Synthesis C TRQ2_RS00520 PF18665 Tetracyclin repressor-like, C-terminal domain TRQ2_RS00520 PF00440 Bacterial regulatory proteins, tetR family TRQ2_RS00525 PF01588 Putative tRNA binding domain TRQ2_RS00525 PF03147 Ferredoxin-fold anticodon binding domain TRQ2_RS00525 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TRQ2_RS00525 PF03483 B3/4 domain TRQ2_RS00525 PF03484 tRNA synthetase B5 domain TRQ2_RS00530 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TRQ2_RS00530 PF01409 tRNA synthetases class II core domain (F) TRQ2_RS00540 PF00465 Iron-containing alcohol dehydrogenase TRQ2_RS00545 PF00860 Permease family TRQ2_RS00550 PF03808 Glycosyl transferase WecB/TagA/CpsF family TRQ2_RS00570 PF01554 MatE TRQ2_RS00575 PF01979 Amidohydrolase family TRQ2_RS00580 PF01380 SIS domain TRQ2_RS00585 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS00590 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS00595 PF01547 Bacterial extracellular solute-binding protein TRQ2_RS00600 PF00933 Glycosyl hydrolase family 3 N terminal domain TRQ2_RS00605 PF00480 ROK family TRQ2_RS00610 PF10417 C-terminal domain of 1-Cys peroxiredoxin TRQ2_RS00610 PF00578 AhpC/TSA family TRQ2_RS00620 PF00953 Glycosyl transferase family 4 TRQ2_RS00625 PF02811 PHP domain TRQ2_RS00630 PF00117 Glutamine amidotransferase class-I TRQ2_RS00630 PF06418 CTP synthase N-terminus TRQ2_RS00635 PF02801 Beta-ketoacyl synthase, C-terminal domain TRQ2_RS00635 PF00109 Beta-ketoacyl synthase, N-terminal domain TRQ2_RS00640 PF07977 FabA-like domain TRQ2_RS00645 PF03060 Nitronate monooxygenase TRQ2_RS00650 PF02632 BioY family TRQ2_RS00655 PF00698 Acyl transferase domain TRQ2_RS00660 PF04029 2-phosphosulpholactate phosphatase TRQ2_RS00685 PF00005 ABC transporter TRQ2_RS00690 PF02592 Putative vitamin uptake transporter TRQ2_RS00695 PF14489 QueF-like protein TRQ2_RS00700 PF10120 Thiamine-phosphate synthase TRQ2_RS00700 PF08543 Phosphomethylpyrimidine kinase TRQ2_RS00710 PF01964 Radical SAM ThiC family TRQ2_RS00725 PF04454 Encapsulating protein for peroxidase TRQ2_RS00745 PF00578 AhpC/TSA family TRQ2_RS00770 PF04760 Translation initiation factor IF-2, N-terminal region TRQ2_RS00770 PF11987 Translation-initiation factor 2 TRQ2_RS00770 PF00009 Elongation factor Tu GTP binding domain TRQ2_RS00775 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family TRQ2_RS00785 PF04468 PSP1 C-terminal conserved region TRQ2_RS00790 PF09115 DNA polymerase III, delta subunit, C terminal TRQ2_RS00795 PF00919 Uncharacterized protein family UPF0004 TRQ2_RS00795 PF04055 Radical SAM superfamily TRQ2_RS00795 PF01938 TRAM domain TRQ2_RS00800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TRQ2_RS00800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TRQ2_RS00800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TRQ2_RS00800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TRQ2_RS00805 PF01926 50S ribosome-binding GTPase TRQ2_RS00810 PF02806 Alpha amylase, C-terminal all-beta domain TRQ2_RS00810 PF00128 Alpha amylase, catalytic domain TRQ2_RS00810 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TRQ2_RS00815 PF00392 Bacterial regulatory proteins, gntR family TRQ2_RS00815 PF07702 UTRA domain TRQ2_RS00820 PF00005 ABC transporter TRQ2_RS00830 PF01906 Putative heavy-metal-binding TRQ2_RS00835 PF00318 Ribosomal protein S2 TRQ2_RS00855 PF00669 Bacterial flagellin N-terminal helical region TRQ2_RS00855 PF00700 Bacterial flagellin C-terminal helical region TRQ2_RS00860 PF13181 Tetratricopeptide repeat TRQ2_RS00860 PF00535 Glycosyl transferase family 2 TRQ2_RS00875 PF00258 Flavodoxin TRQ2_RS00875 PF00753 Metallo-beta-lactamase superfamily TRQ2_RS00880 PF04324 BFD-like [2Fe-2S] binding domain TRQ2_RS00880 PF18267 Rubredoxin NAD+ reductase C-terminal domain TRQ2_RS00880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TRQ2_RS00880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TRQ2_RS00880 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRQ2_RS00885 PF01209 ubiE/COQ5 methyltransferase family TRQ2_RS00890 PF11975 Family 4 glycosyl hydrolase C-terminal domain TRQ2_RS00890 PF02056 Family 4 glycosyl hydrolase TRQ2_RS00900 PF00485 Phosphoribulokinase / Uridine kinase family TRQ2_RS00920 PF03572 Peptidase family S41 TRQ2_RS00920 PF13180 PDZ domain TRQ2_RS00935 PF00534 Glycosyl transferases group 1 TRQ2_RS00935 PF13439 Glycosyltransferase Family 4 TRQ2_RS00950 PF01467 Cytidylyltransferase-like TRQ2_RS00955 PF02824 TGS domain TRQ2_RS00955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TRQ2_RS00955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TRQ2_RS00955 PF03129 Anticodon binding domain TRQ2_RS00960 PF01966 HD domain TRQ2_RS00975 PF01238 Phosphomannose isomerase type I TRQ2_RS00985 PF01134 Glucose inhibited division protein A TRQ2_RS01000 PF02677 Epoxyqueuosine reductase QueH TRQ2_RS01005 PF02580 D-Tyr-tRNA(Tyr) deacylase TRQ2_RS01010 PF02824 TGS domain TRQ2_RS01010 PF04607 Region found in RelA / SpoT proteins TRQ2_RS01010 PF13291 ACT domain TRQ2_RS01025 PF01523 Putative modulator of DNA gyrase TRQ2_RS01030 PF01523 Putative modulator of DNA gyrase TRQ2_RS01040 PF01699 Sodium/calcium exchanger protein TRQ2_RS01050 PF17876 Cold shock domain TRQ2_RS01050 PF08206 Ribonuclease B OB domain TRQ2_RS01050 PF00575 S1 RNA binding domain TRQ2_RS01050 PF00773 RNB domain TRQ2_RS01060 PF00464 Serine hydroxymethyltransferase TRQ2_RS01065 PF01406 tRNA synthetases class I (C) catalytic domain TRQ2_RS01065 PF09190 DALR domain TRQ2_RS01070 PF01584 CheW-like domain TRQ2_RS01075 PF00682 HMGL-like TRQ2_RS01075 PF00364 Biotin-requiring enzyme TRQ2_RS01075 PF02436 Conserved carboxylase domain TRQ2_RS01085 PF01039 Carboxyl transferase domain TRQ2_RS01090 PF00571 CBS domain TRQ2_RS01090 PF02272 DHHA1 domain TRQ2_RS01090 PF01743 Poly A polymerase head domain TRQ2_RS01090 PF01368 DHH family TRQ2_RS01090 PF12627 Probable RNA and SrmB- binding site of polymerase A TRQ2_RS01120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TRQ2_RS01125 PF03099 Biotin/lipoate A/B protein ligase family TRQ2_RS01130 PF02527 rRNA small subunit methyltransferase G TRQ2_RS01140 PF00005 ABC transporter TRQ2_RS01150 PF18146 Damage-inducible protein CinA KH domain TRQ2_RS01150 PF02464 Competence-damaged protein TRQ2_RS01150 PF00994 Probable molybdopterin binding domain TRQ2_RS01155 PF01584 CheW-like domain TRQ2_RS01155 PF02895 Signal transducing histidine kinase, homodimeric domain TRQ2_RS01155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRQ2_RS01155 PF01627 Hpt domain TRQ2_RS01155 PF07194 P2 response regulator binding domain TRQ2_RS01160 PF01584 CheW-like domain TRQ2_RS01165 PF00072 Response regulator receiver domain TRQ2_RS01175 PF00813 FliP family TRQ2_RS01190 PF00574 Clp protease TRQ2_RS01195 PF05697 Bacterial trigger factor protein (TF) TRQ2_RS01195 PF05698 Bacterial trigger factor protein (TF) C-terminus TRQ2_RS01205 PF01648 4'-phosphopantetheinyl transferase superfamily TRQ2_RS01220 PF00162 Phosphoglycerate kinase TRQ2_RS01220 PF00121 Triosephosphate isomerase TRQ2_RS01225 PF00162 Phosphoglycerate kinase TRQ2_RS01230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TRQ2_RS01230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TRQ2_RS01240 PF12169 DNA polymerase III subunits gamma and tau domain III TRQ2_RS01270 PF04509 CheC-like family TRQ2_RS01270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TRQ2_RS01275 PF02154 Flagellar motor switch protein FliM TRQ2_RS01275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TRQ2_RS01285 PF13677 Membrane MotB of proton-channel complex MotA/MotB TRQ2_RS01285 PF00691 OmpA family TRQ2_RS01290 PF01618 MotA/TolQ/ExbB proton channel family TRQ2_RS01295 PF06289 Flagellar and Swarming motility proteins TRQ2_RS01300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TRQ2_RS01300 PF00460 Flagella basal body rod protein TRQ2_RS01300 PF07559 Flagellar basal body protein FlaE TRQ2_RS01330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TRQ2_RS01335 PF01026 TatD related DNase TRQ2_RS01340 PF00132 Bacterial transferase hexapeptide (six repeats) TRQ2_RS01345 PF00291 Pyridoxal-phosphate dependent enzyme TRQ2_RS01360 PF00550 Phosphopantetheine attachment site TRQ2_RS01370 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase TRQ2_RS01375 PF00301 Rubredoxin TRQ2_RS01380 PF01880 Desulfoferrodoxin TRQ2_RS01385 PF02915 Rubrerythrin TRQ2_RS01390 PF01381 Helix-turn-helix TRQ2_RS01395 PF02675 S-adenosylmethionine decarboxylase TRQ2_RS01400 PF17284 Spermidine synthase tetramerisation domain TRQ2_RS01405 PF04055 Radical SAM superfamily TRQ2_RS01405 PF00919 Uncharacterized protein family UPF0004 TRQ2_RS01405 PF01938 TRAM domain TRQ2_RS01430 PF02542 YgbB family TRQ2_RS01440 PF02540 NAD synthase TRQ2_RS01470 PF02563 Polysaccharide biosynthesis/export protein TRQ2_RS01470 PF10531 SLBB domain TRQ2_RS01470 PF18412 Outer-membrane lipoprotein Wza C-terminal domain TRQ2_RS01495 PF10135 Rod binding protein TRQ2_RS01495 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TRQ2_RS01500 PF02397 Bacterial sugar transferase TRQ2_RS01505 PF00534 Glycosyl transferases group 1 TRQ2_RS01505 PF13439 Glycosyltransferase Family 4 TRQ2_RS01530 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TRQ2_RS01535 PF01467 Cytidylyltransferase-like TRQ2_RS01545 PF00483 Nucleotidyl transferase TRQ2_RS01550 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TRQ2_RS01555 PF16363 GDP-mannose 4,6 dehydratase TRQ2_RS01560 PF04321 RmlD substrate binding domain TRQ2_RS01575 PF13439 Glycosyltransferase Family 4 TRQ2_RS01575 PF00534 Glycosyl transferases group 1 TRQ2_RS01610 PF03787 RAMP superfamily TRQ2_RS01655 PF02350 UDP-N-acetylglucosamine 2-epimerase TRQ2_RS01670 PF00753 Metallo-beta-lactamase superfamily TRQ2_RS01670 PF16123 Hydroxyacylglutathione hydrolase C-terminus TRQ2_RS01680 PF01084 Ribosomal protein S18 TRQ2_RS01685 PF00436 Single-strand binding protein family TRQ2_RS01690 PF01250 Ribosomal protein S6 TRQ2_RS01715 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS01720 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS01730 PF00860 Permease family TRQ2_RS01735 PF00497 Bacterial extracellular solute-binding proteins, family 3 TRQ2_RS01740 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS01745 PF00005 ABC transporter TRQ2_RS01750 PF00905 Penicillin binding protein transpeptidase domain TRQ2_RS01750 PF03717 Penicillin-binding Protein dimerisation domain TRQ2_RS01770 PF07085 DRTGG domain TRQ2_RS01770 PF01368 DHH family TRQ2_RS01770 PF00571 CBS domain TRQ2_RS01770 PF02833 DHHA2 domain TRQ2_RS01775 PF00892 EamA-like transporter family TRQ2_RS01780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TRQ2_RS01780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TRQ2_RS01790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TRQ2_RS01790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TRQ2_RS01790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TRQ2_RS01805 PF17862 AAA+ lid domain TRQ2_RS01805 PF00004 ATPase family associated with various cellular activities (AAA) TRQ2_RS01805 PF06480 FtsH Extracellular TRQ2_RS01805 PF01434 Peptidase family M41 TRQ2_RS01810 PF11734 TilS substrate C-terminal domain TRQ2_RS01810 PF01171 PP-loop family TRQ2_RS01820 PF03807 NADP oxidoreductase coenzyme F420-dependent TRQ2_RS01820 PF14748 Pyrroline-5-carboxylate reductase dimerisation TRQ2_RS01825 PF00583 Acetyltransferase (GNAT) family TRQ2_RS01830 PF02811 PHP domain TRQ2_RS01830 PF14579 Helix-hairpin-helix motif TRQ2_RS01830 PF07733 Bacterial DNA polymerase III alpha NTPase domain TRQ2_RS01830 PF00929 Exonuclease TRQ2_RS01830 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TRQ2_RS01835 PF02075 Crossover junction endodeoxyribonuclease RuvC TRQ2_RS01840 PF02547 Queuosine biosynthesis protein TRQ2_RS01845 PF00795 Carbon-nitrogen hydrolase TRQ2_RS01850 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TRQ2_RS01855 PF13180 PDZ domain TRQ2_RS01855 PF17820 PDZ domain TRQ2_RS01860 PF02881 SRP54-type protein, helical bundle domain TRQ2_RS01860 PF00448 SRP54-type protein, GTPase domain TRQ2_RS01875 PF02082 Transcriptional regulator TRQ2_RS01885 PF17746 SfsA N-terminal OB domain TRQ2_RS01885 PF03749 Sugar fermentation stimulation protein RE domain TRQ2_RS01910 PF01544 CorA-like Mg2+ transporter protein TRQ2_RS01925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TRQ2_RS01925 PF00117 Glutamine amidotransferase class-I TRQ2_RS01930 PF02142 MGS-like domain TRQ2_RS01930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TRQ2_RS01930 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TRQ2_RS01935 PF00180 Isocitrate/isopropylmalate dehydrogenase TRQ2_RS01940 PF00694 Aconitase C-terminal domain TRQ2_RS01945 PF00330 Aconitase family (aconitate hydratase) TRQ2_RS01950 PF00682 HMGL-like TRQ2_RS01950 PF08502 LeuA allosteric (dimerisation) domain TRQ2_RS01955 PF00682 HMGL-like TRQ2_RS01955 PF08502 LeuA allosteric (dimerisation) domain TRQ2_RS01960 PF00920 Dehydratase family TRQ2_RS01965 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TRQ2_RS01965 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TRQ2_RS01970 PF10369 Small subunit of acetolactate synthase TRQ2_RS01975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TRQ2_RS01975 PF00205 Thiamine pyrophosphate enzyme, central domain TRQ2_RS01975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TRQ2_RS01980 PF01842 ACT domain TRQ2_RS01980 PF13840 ACT domain TRQ2_RS01980 PF00696 Amino acid kinase family TRQ2_RS01985 PF00291 Pyridoxal-phosphate dependent enzyme TRQ2_RS01990 PF00288 GHMP kinases N terminal domain TRQ2_RS01995 PF00005 ABC transporter TRQ2_RS02005 PF03949 Malic enzyme, NAD binding domain TRQ2_RS02005 PF00390 Malic enzyme, N-terminal domain TRQ2_RS02010 PF05683 Fumarase C-terminus TRQ2_RS02010 PF05681 Fumarate hydratase (Fumerase) TRQ2_RS02020 PF00291 Pyridoxal-phosphate dependent enzyme TRQ2_RS02025 PF01545 Cation efflux family TRQ2_RS02030 PF13514 AAA domain TRQ2_RS02045 PF04539 Sigma-70 region 3 TRQ2_RS02045 PF04542 Sigma-70 region 2 TRQ2_RS02045 PF00140 Sigma-70 factor, region 1.2 TRQ2_RS02045 PF03979 Sigma-70 factor, region 1.1 TRQ2_RS02045 PF04545 Sigma-70, region 4 TRQ2_RS02050 PF12911 N-terminal TM domain of oligopeptide transport permease C TRQ2_RS02050 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS02055 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS02060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TRQ2_RS02065 PF00005 ABC transporter TRQ2_RS02065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS02075 PF02911 Formyl transferase, C-terminal domain TRQ2_RS02075 PF00551 Formyl transferase TRQ2_RS02080 PF16360 GTP-binding GTPase Middle Region TRQ2_RS02080 PF01926 50S ribosome-binding GTPase TRQ2_RS02080 PF13167 GTP-binding GTPase N-terminal TRQ2_RS02085 PF17209 Hfq protein TRQ2_RS02095 PF04445 Putative SAM-dependent methyltransferase TRQ2_RS02110 PF10431 C-terminal, D2-small domain, of ClpB protein TRQ2_RS02110 PF00004 ATPase family associated with various cellular activities (AAA) TRQ2_RS02110 PF07724 AAA domain (Cdc48 subfamily) TRQ2_RS02115 PF00227 Proteasome subunit TRQ2_RS02145 PF04055 Radical SAM superfamily TRQ2_RS02145 PF16199 Radical_SAM C-terminal domain TRQ2_RS02150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TRQ2_RS02150 PF04073 Aminoacyl-tRNA editing domain TRQ2_RS02150 PF03129 Anticodon binding domain TRQ2_RS02155 PF01078 Magnesium chelatase, subunit ChlI TRQ2_RS02155 PF13335 Magnesium chelatase, subunit ChlI C-terminal TRQ2_RS02165 PF03167 Uracil DNA glycosylase superfamily TRQ2_RS02175 PF16363 GDP-mannose 4,6 dehydratase TRQ2_RS02180 PF16193 AAA C-terminal domain TRQ2_RS02180 PF01661 Macro domain TRQ2_RS02180 PF12002 MgsA AAA+ ATPase C terminal TRQ2_RS02180 PF05496 Holliday junction DNA helicase RuvB P-loop domain TRQ2_RS02185 PF00118 TCP-1/cpn60 chaperonin family TRQ2_RS02190 PF00166 Chaperonin 10 Kd subunit TRQ2_RS02195 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS02200 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS02200 PF12911 N-terminal TM domain of oligopeptide transport permease C TRQ2_RS02205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS02205 PF00005 ABC transporter TRQ2_RS02210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS02210 PF00005 ABC transporter TRQ2_RS02220 PF00005 ABC transporter TRQ2_RS02220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS02230 PF14579 Helix-hairpin-helix motif TRQ2_RS02230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TRQ2_RS02230 PF00929 Exonuclease TRQ2_RS02230 PF07733 Bacterial DNA polymerase III alpha NTPase domain TRQ2_RS02230 PF11490 DNA polymerase III polC-type N-terminus II TRQ2_RS02230 PF01336 OB-fold nucleic acid binding domain TRQ2_RS02230 PF02811 PHP domain TRQ2_RS02235 PF13638 PIN domain TRQ2_RS02235 PF02562 PhoH-like protein TRQ2_RS02240 PF04079 Segregation and condensation complex subunit ScpB TRQ2_RS02245 PF02616 Segregation and condensation protein ScpA TRQ2_RS02250 PF00579 tRNA synthetases class I (W and Y) TRQ2_RS02260 PF02146 Sir2 family TRQ2_RS02265 PF00196 Bacterial regulatory proteins, luxR family TRQ2_RS02270 PF05175 Methyltransferase small domain TRQ2_RS02270 PF17827 PrmC N-terminal domain TRQ2_RS02275 PF01883 Iron-sulfur cluster assembly protein TRQ2_RS02280 PF01910 Thiamine-binding protein TRQ2_RS02290 PF09084 NMT1/THI5 like TRQ2_RS02295 PF00005 ABC transporter TRQ2_RS02325 PF17755 UvrA DNA-binding domain TRQ2_RS02325 PF17760 UvrA interaction domain TRQ2_RS02325 PF00005 ABC transporter TRQ2_RS02335 PF00579 tRNA synthetases class I (W and Y) TRQ2_RS02335 PF01479 S4 domain TRQ2_RS02340 PF00395 S-layer homology domain TRQ2_RS02355 PF00857 Isochorismatase family TRQ2_RS02365 PF01680 SOR/SNZ family TRQ2_RS02370 PF01174 SNO glutamine amidotransferase family TRQ2_RS02390 PF00072 Response regulator receiver domain TRQ2_RS02390 PF00486 Transcriptional regulatory protein, C terminal TRQ2_RS02400 PF01709 Transcriptional regulator TRQ2_RS02410 PF03705 CheR methyltransferase, all-alpha domain TRQ2_RS02410 PF01739 CheR methyltransferase, SAM binding domain TRQ2_RS02415 PF01479 S4 domain TRQ2_RS02415 PF00849 RNA pseudouridylate synthase TRQ2_RS02420 PF14579 Helix-hairpin-helix motif TRQ2_RS02420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TRQ2_RS02420 PF07733 Bacterial DNA polymerase III alpha NTPase domain TRQ2_RS02425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TRQ2_RS02430 PF04997 RNA polymerase Rpb1, domain 1 TRQ2_RS02430 PF04998 RNA polymerase Rpb1, domain 5 TRQ2_RS02430 PF05000 RNA polymerase Rpb1, domain 4 TRQ2_RS02430 PF04983 RNA polymerase Rpb1, domain 3 TRQ2_RS02430 PF00623 RNA polymerase Rpb1, domain 2 TRQ2_RS02435 PF04565 RNA polymerase Rpb2, domain 3 TRQ2_RS02435 PF10385 RNA polymerase beta subunit external 1 domain TRQ2_RS02435 PF00562 RNA polymerase Rpb2, domain 6 TRQ2_RS02435 PF04563 RNA polymerase beta subunit TRQ2_RS02435 PF04560 RNA polymerase Rpb2, domain 7 TRQ2_RS02440 PF00542 Ribosomal protein L7/L12 C-terminal domain TRQ2_RS02440 PF16320 Ribosomal protein L7/L12 dimerisation domain TRQ2_RS02445 PF00466 Ribosomal protein L10 TRQ2_RS02450 PF00687 Ribosomal protein L1p/L10e family TRQ2_RS02455 PF00298 Ribosomal protein L11, RNA binding domain TRQ2_RS02455 PF03946 Ribosomal protein L11, N-terminal domain TRQ2_RS02460 PF00467 KOW motif TRQ2_RS02460 PF18298 NusG additional domain TRQ2_RS02460 PF02357 Transcription termination factor nusG TRQ2_RS02465 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TRQ2_RS02475 PF00471 Ribosomal protein L33 TRQ2_RS02500 PF02511 Thymidylate synthase complementing protein TRQ2_RS02505 PF01103 Surface antigen TRQ2_RS02505 PF07244 Surface antigen variable number repeat TRQ2_RS02510 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain TRQ2_RS02510 PF02222 ATP-grasp domain TRQ2_RS02515 PF00731 AIR carboxylase TRQ2_RS02520 PF10396 GTP-binding protein TrmE N-terminus TRQ2_RS02520 PF12631 MnmE helical domain TRQ2_RS02520 PF01926 50S ribosome-binding GTPase TRQ2_RS02525 PF10415 Fumarase C C-terminus TRQ2_RS02525 PF00206 Lyase TRQ2_RS02530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TRQ2_RS02530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TRQ2_RS02545 PF16257 tagaturonate epimerase TRQ2_RS02550 PF07729 FCD domain TRQ2_RS02550 PF00392 Bacterial regulatory proteins, gntR family TRQ2_RS02555 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TRQ2_RS02555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TRQ2_RS02560 PF00295 Glycosyl hydrolases family 28 TRQ2_RS02565 PF08240 Alcohol dehydrogenase GroES-like domain TRQ2_RS02565 PF00107 Zinc-binding dehydrogenase TRQ2_RS02570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TRQ2_RS02575 PF01095 Pectinesterase TRQ2_RS02580 PF14310 Fibronectin type III-like domain TRQ2_RS02580 PF00933 Glycosyl hydrolase family 3 N terminal domain TRQ2_RS02580 PF01915 Glycosyl hydrolase family 3 C-terminal domain TRQ2_RS02585 PF01738 Dienelactone hydrolase family TRQ2_RS02590 PF05448 Acetyl xylan esterase (AXE1) TRQ2_RS02595 PF02056 Family 4 glycosyl hydrolase TRQ2_RS02595 PF11975 Family 4 glycosyl hydrolase C-terminal domain TRQ2_RS02600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS02600 PF00005 ABC transporter TRQ2_RS02605 PF00005 ABC transporter TRQ2_RS02605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS02610 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS02610 PF12911 N-terminal TM domain of oligopeptide transport permease C TRQ2_RS02615 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS02620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TRQ2_RS02625 PF00544 Pectate lyase TRQ2_RS02635 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS02640 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS02645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRQ2_RS02650 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TRQ2_RS02675 PF00465 Iron-containing alcohol dehydrogenase TRQ2_RS02685 PF04225 Opacity-associated protein A LysM-like domain TRQ2_RS02685 PF01551 Peptidase family M23 TRQ2_RS02690 PF01339 CheB methylesterase TRQ2_RS02690 PF00072 Response regulator receiver domain TRQ2_RS02705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TRQ2_RS02715 PF00543 Nitrogen regulatory protein P-II TRQ2_RS02720 PF00909 Ammonium Transporter Family TRQ2_RS02725 PF00265 Thymidine kinase TRQ2_RS02730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRQ2_RS02730 PF00512 His Kinase A (phospho-acceptor) domain TRQ2_RS02730 PF00672 HAMP domain TRQ2_RS02735 PF00072 Response regulator receiver domain TRQ2_RS02735 PF00486 Transcriptional regulatory protein, C terminal TRQ2_RS02745 PF00310 Glutamine amidotransferases class-II TRQ2_RS02750 PF01645 Conserved region in glutamate synthase TRQ2_RS02750 PF13187 4Fe-4S dicluster domain TRQ2_RS02755 PF13247 4Fe-4S dicluster domain TRQ2_RS02755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TRQ2_RS02755 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRQ2_RS02760 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRQ2_RS02775 PF00534 Glycosyl transferases group 1 TRQ2_RS02785 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TRQ2_RS02785 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TRQ2_RS02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRQ2_RS02790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TRQ2_RS02800 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRQ2_RS02800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TRQ2_RS02805 PF00730 HhH-GPD superfamily base excision DNA repair protein TRQ2_RS02805 PF14815 NUDIX domain TRQ2_RS02805 PF00633 Helix-hairpin-helix motif TRQ2_RS02810 PF00881 Nitroreductase family TRQ2_RS02820 PF13597 Anaerobic ribonucleoside-triphosphate reductase TRQ2_RS02820 PF03477 ATP cone domain TRQ2_RS02825 PF00881 Nitroreductase family TRQ2_RS02840 PF00005 ABC transporter TRQ2_RS02845 PF01925 Sulfite exporter TauE/SafE TRQ2_RS02850 PF06130 Phosphate propanoyltransferase TRQ2_RS02855 PF00011 Hsp20/alpha crystallin family TRQ2_RS02860 PF00012 Hsp70 protein TRQ2_RS02865 PF00873 AcrB/AcrD/AcrF family TRQ2_RS02870 PF01316 Arginine repressor, DNA binding domain TRQ2_RS02870 PF02863 Arginine repressor, C-terminal domain TRQ2_RS02875 PF06745 KaiC TRQ2_RS02890 PF00672 HAMP domain TRQ2_RS02890 PF02743 Cache domain TRQ2_RS02890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRQ2_RS02900 PF00730 HhH-GPD superfamily base excision DNA repair protein TRQ2_RS02900 PF00633 Helix-hairpin-helix motif TRQ2_RS02900 PF10576 Iron-sulfur binding domain of endonuclease III TRQ2_RS02905 PF02127 Aminopeptidase I zinc metalloprotease (M18) TRQ2_RS02910 PF00128 Alpha amylase, catalytic domain TRQ2_RS02910 PF09178 Domain of unknown function (DUF1945) TRQ2_RS02915 PF05670 NFACT protein RNA binding domain TRQ2_RS02920 PF01261 Xylose isomerase-like TIM barrel TRQ2_RS02930 PF03819 MazG nucleotide pyrophosphohydrolase domain TRQ2_RS02945 PF13439 Glycosyltransferase Family 4 TRQ2_RS02950 PF00781 Diacylglycerol kinase catalytic domain TRQ2_RS02960 PF00465 Iron-containing alcohol dehydrogenase TRQ2_RS02965 PF00291 Pyridoxal-phosphate dependent enzyme TRQ2_RS02965 PF13291 ACT domain TRQ2_RS02980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TRQ2_RS02985 PF00005 ABC transporter TRQ2_RS02990 PF12704 MacB-like periplasmic core domain TRQ2_RS02990 PF02687 FtsX-like permease family TRQ2_RS02990 PF00005 ABC transporter TRQ2_RS03000 PF01220 Dehydroquinase class II TRQ2_RS03005 PF01761 3-dehydroquinate synthase TRQ2_RS03005 PF01202 Shikimate kinase TRQ2_RS03010 PF01264 Chorismate synthase TRQ2_RS03015 PF08501 Shikimate dehydrogenase substrate binding domain TRQ2_RS03015 PF01488 Shikimate / quinate 5-dehydrogenase TRQ2_RS03020 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TRQ2_RS03030 PF00793 DAHP synthetase I family TRQ2_RS03030 PF18152 DAHP synthase ferredoxin-like domain TRQ2_RS03055 PF08497 Radical SAM N-terminal TRQ2_RS03055 PF04055 Radical SAM superfamily TRQ2_RS03055 PF11842 Domain of unknown function (DUF3362) TRQ2_RS03060 PF13026 Protein of unknown function (DUF3887) TRQ2_RS03060 PF12146 Serine aminopeptidase, S33 TRQ2_RS03070 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TRQ2_RS03075 PF01180 Dihydroorotate dehydrogenase TRQ2_RS03080 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TRQ2_RS03085 PF00156 Phosphoribosyl transferase domain TRQ2_RS03090 PF07969 Amidohydrolase family TRQ2_RS03100 PF01555 DNA methylase TRQ2_RS03110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TRQ2_RS03110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TRQ2_RS03115 PF01418 Helix-turn-helix domain, rpiR family TRQ2_RS03115 PF01380 SIS domain TRQ2_RS03125 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TRQ2_RS03135 PF03480 Bacterial extracellular solute-binding protein, family 7 TRQ2_RS03150 PF00403 Heavy-metal-associated domain TRQ2_RS03165 PF00248 Aldo/keto reductase family TRQ2_RS03170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TRQ2_RS03170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TRQ2_RS03180 PF08532 Beta-galactosidase trimerisation domain TRQ2_RS03180 PF08533 Beta-galactosidase C-terminal domain TRQ2_RS03180 PF02449 Beta-galactosidase TRQ2_RS03185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TRQ2_RS03190 PF01055 Glycosyl hydrolases family 31 TRQ2_RS03190 PF13802 Galactose mutarotase-like TRQ2_RS03205 PF03442 Carbohydrate binding domain X2 TRQ2_RS03205 PF00942 Cellulose binding domain TRQ2_RS03210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS03210 PF00005 ABC transporter TRQ2_RS03215 PF00005 ABC transporter TRQ2_RS03215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS03220 PF12911 N-terminal TM domain of oligopeptide transport permease C TRQ2_RS03220 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS03225 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS03235 PF00356 Bacterial regulatory proteins, lacI family TRQ2_RS03240 PF08240 Alcohol dehydrogenase GroES-like domain TRQ2_RS03240 PF16912 Glucose dehydrogenase C-terminus TRQ2_RS03250 PF00294 pfkB family carbohydrate kinase TRQ2_RS03255 PF00923 Transaldolase/Fructose-6-phosphate aldolase TRQ2_RS03260 PF05524 PEP-utilising enzyme, N-terminal TRQ2_RS03260 PF00391 PEP-utilising enzyme, mobile domain TRQ2_RS03260 PF02896 PEP-utilising enzyme, TIM barrel domain TRQ2_RS03265 PF00381 PTS HPr component phosphorylation site TRQ2_RS03270 PF02378 Phosphotransferase system, EIIC TRQ2_RS03270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TRQ2_RS03275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TRQ2_RS03275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TRQ2_RS03280 PF00294 pfkB family carbohydrate kinase TRQ2_RS03285 PF08220 DeoR-like helix-turn-helix domain TRQ2_RS03285 PF00455 DeoR C terminal sensor domain TRQ2_RS03290 PF00696 Amino acid kinase family TRQ2_RS03290 PF01472 PUA domain TRQ2_RS03295 PF00171 Aldehyde dehydrogenase family TRQ2_RS03300 PF00694 Aconitase C-terminal domain TRQ2_RS03305 PF00330 Aconitase family (aconitate hydratase) TRQ2_RS03310 PF00285 Citrate synthase, C-terminal domain TRQ2_RS03315 PF00365 Phosphofructokinase TRQ2_RS03320 PF00005 ABC transporter TRQ2_RS03320 PF00664 ABC transporter transmembrane region TRQ2_RS03325 PF00664 ABC transporter transmembrane region TRQ2_RS03325 PF00005 ABC transporter TRQ2_RS03335 PF13685 Iron-containing alcohol dehydrogenase TRQ2_RS03340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TRQ2_RS03340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TRQ2_RS03345 PF00596 Class II Aldolase and Adducin N-terminal domain TRQ2_RS03350 PF01263 Aldose 1-epimerase TRQ2_RS03355 PF06964 Alpha-L-arabinofuranosidase C-terminal domain TRQ2_RS03365 PF06964 Alpha-L-arabinofuranosidase C-terminal domain TRQ2_RS03365 PF02018 Carbohydrate binding domain TRQ2_RS03370 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS03375 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS03385 PF16369 C-terminal lipocalin-like domain TRQ2_RS03385 PF04616 Glycosyl hydrolases family 43 TRQ2_RS03395 PF04616 Glycosyl hydrolases family 43 TRQ2_RS03395 PF16369 C-terminal lipocalin-like domain TRQ2_RS03420 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS03425 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS03435 PF11762 L-arabinose isomerase C-terminal domain TRQ2_RS03435 PF02610 L-arabinose isomerase TRQ2_RS03440 PF00392 Bacterial regulatory proteins, gntR family TRQ2_RS03445 PF00871 Acetokinase family TRQ2_RS03450 PF01116 Fructose-bisphosphate aldolase class-II TRQ2_RS03455 PF00391 PEP-utilising enzyme, mobile domain TRQ2_RS03455 PF02896 PEP-utilising enzyme, TIM barrel domain TRQ2_RS03455 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TRQ2_RS03465 PF02219 Methylenetetrahydrofolate reductase TRQ2_RS03465 PF02574 Homocysteine S-methyltransferase TRQ2_RS03475 PF02310 B12 binding domain TRQ2_RS03475 PF02607 B12 binding domain TRQ2_RS03475 PF02965 Vitamin B12 dependent methionine synthase, activation domain TRQ2_RS03475 PF00809 Pterin binding enzyme TRQ2_RS03475 PF02574 Homocysteine S-methyltransferase TRQ2_RS03480 PF01926 50S ribosome-binding GTPase TRQ2_RS03480 PF10396 GTP-binding protein TrmE N-terminus TRQ2_RS03480 PF12631 MnmE helical domain TRQ2_RS03485 PF00216 Bacterial DNA-binding protein TRQ2_RS03490 PF01541 GIY-YIG catalytic domain TRQ2_RS03490 PF08459 UvrC Helix-hairpin-helix N-terminal TRQ2_RS03490 PF02151 UvrB/uvrC motif TRQ2_RS03495 PF01479 S4 domain TRQ2_RS03495 PF00849 RNA pseudouridylate synthase TRQ2_RS03500 PF13932 GidA associated domain TRQ2_RS03500 PF01134 Glucose inhibited division protein A TRQ2_RS03505 PF02767 DNA polymerase III beta subunit, central domain TRQ2_RS03505 PF02768 DNA polymerase III beta subunit, C-terminal domain TRQ2_RS03505 PF00712 DNA polymerase III beta subunit, N-terminal domain TRQ2_RS03510 PF01384 Phosphate transporter family TRQ2_RS03520 PF07478 D-ala D-ala ligase C-terminus TRQ2_RS03520 PF01820 D-ala D-ala ligase N-terminus TRQ2_RS03525 PF01751 Toprim domain TRQ2_RS03525 PF01131 DNA topoisomerase TRQ2_RS03530 PF01966 HD domain TRQ2_RS03530 PF01336 OB-fold nucleic acid binding domain TRQ2_RS03540 PF00830 Ribosomal L28 family TRQ2_RS03545 PF01668 SmpB protein TRQ2_RS03550 PF02021 Uncharacterised protein family UPF0102 TRQ2_RS03555 PF02686 Glu-tRNAGln amidotransferase C subunit TRQ2_RS03560 PF02599 Global regulator protein family TRQ2_RS03565 PF02481 DNA recombination-mediator protein A TRQ2_RS03565 PF18255 DNA processing protein A sterile alpha motif domain TRQ2_RS03570 PF13187 4Fe-4S dicluster domain TRQ2_RS03570 PF04060 Putative Fe-S cluster TRQ2_RS03575 PF02508 Rnf-Nqr subunit, membrane protein TRQ2_RS03580 PF02508 Rnf-Nqr subunit, membrane protein TRQ2_RS03590 PF03116 NQR2, RnfD, RnfE family TRQ2_RS03595 PF10531 SLBB domain TRQ2_RS03595 PF13237 4Fe-4S dicluster domain TRQ2_RS03595 PF13375 RnfC Barrel sandwich hybrid domain TRQ2_RS03595 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TRQ2_RS03600 PF06968 Biotin and Thiamin Synthesis associated domain TRQ2_RS03600 PF04055 Radical SAM superfamily TRQ2_RS03615 PF00132 Bacterial transferase hexapeptide (six repeats) TRQ2_RS03615 PF00483 Nucleotidyl transferase TRQ2_RS03620 PF00483 Nucleotidyl transferase TRQ2_RS03620 PF00132 Bacterial transferase hexapeptide (six repeats) TRQ2_RS03630 PF02875 Mur ligase family, glutamate ligase domain TRQ2_RS03630 PF01225 Mur ligase family, catalytic domain TRQ2_RS03630 PF08245 Mur ligase middle domain TRQ2_RS03635 PF01225 Mur ligase family, catalytic domain TRQ2_RS03635 PF02875 Mur ligase family, glutamate ligase domain TRQ2_RS03635 PF08245 Mur ligase middle domain TRQ2_RS03640 PF00953 Glycosyl transferase family 4 TRQ2_RS03640 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TRQ2_RS03645 PF08245 Mur ligase middle domain TRQ2_RS03650 PF01098 Cell cycle protein TRQ2_RS03655 PF04101 Glycosyltransferase family 28 C-terminal domain TRQ2_RS03655 PF03033 Glycosyltransferase family 28 N-terminal domain TRQ2_RS03660 PF02875 Mur ligase family, glutamate ligase domain TRQ2_RS03660 PF01225 Mur ligase family, catalytic domain TRQ2_RS03660 PF08245 Mur ligase middle domain TRQ2_RS03675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TRQ2_RS03675 PF00037 4Fe-4S binding domain TRQ2_RS03675 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TRQ2_RS03690 PF00291 Pyridoxal-phosphate dependent enzyme TRQ2_RS03695 PF02237 Biotin protein ligase C terminal domain TRQ2_RS03695 PF08279 HTH domain TRQ2_RS03695 PF03099 Biotin/lipoate A/B protein ligase family TRQ2_RS03705 PF00005 ABC transporter TRQ2_RS03710 PF01514 Secretory protein of YscJ/FliF family TRQ2_RS03710 PF08345 Flagellar M-ring protein C-terminal TRQ2_RS03715 PF14842 FliG N-terminal domain TRQ2_RS03715 PF01706 FliG C-terminal domain TRQ2_RS03715 PF14841 FliG middle domain TRQ2_RS03725 PF18269 T3SS EscN ATPase C-terminal domain TRQ2_RS03725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TRQ2_RS03725 PF02874 ATP synthase alpha/beta family, beta-barrel domain TRQ2_RS03730 PF05746 DALR anticodon binding domain TRQ2_RS03730 PF02092 Glycyl-tRNA synthetase beta subunit TRQ2_RS03735 PF02091 Glycyl-tRNA synthetase alpha subunit TRQ2_RS03740 PF01042 Endoribonuclease L-PSP TRQ2_RS03745 PF02347 Glycine cleavage system P-protein TRQ2_RS03750 PF02347 Glycine cleavage system P-protein TRQ2_RS03755 PF01597 Glycine cleavage H-protein TRQ2_RS03760 PF01571 Aminomethyltransferase folate-binding domain TRQ2_RS03760 PF08669 Glycine cleavage T-protein C-terminal barrel domain TRQ2_RS03770 PF00365 Phosphofructokinase TRQ2_RS03775 PF02887 Pyruvate kinase, alpha/beta domain TRQ2_RS03775 PF00224 Pyruvate kinase, barrel domain TRQ2_RS03785 PF00156 Phosphoribosyl transferase domain TRQ2_RS03790 PF00270 DEAD/DEAH box helicase TRQ2_RS03790 PF00271 Helicase conserved C-terminal domain TRQ2_RS03790 PF17191 RecG wedge domain TRQ2_RS03795 PF00005 ABC transporter TRQ2_RS03810 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TRQ2_RS03810 PF02256 Iron hydrogenase small subunit TRQ2_RS03810 PF00037 4Fe-4S binding domain TRQ2_RS03810 PF02906 Iron only hydrogenase large subunit, C-terminal domain TRQ2_RS03815 PF10635 DisA bacterial checkpoint controller linker region TRQ2_RS03815 PF00633 Helix-hairpin-helix motif TRQ2_RS03815 PF02457 DisA bacterial checkpoint controller nucleotide-binding TRQ2_RS03820 PF18073 Rubredoxin metal binding domain TRQ2_RS03825 PF17871 AAA lid domain TRQ2_RS03825 PF00004 ATPase family associated with various cellular activities (AAA) TRQ2_RS03825 PF02861 Clp amino terminal domain, pathogenicity island component TRQ2_RS03825 PF07724 AAA domain (Cdc48 subfamily) TRQ2_RS03825 PF10431 C-terminal, D2-small domain, of ClpB protein TRQ2_RS03830 PF01171 PP-loop family TRQ2_RS03855 PF00005 ABC transporter TRQ2_RS03860 PF03649 Uncharacterised protein family (UPF0014) TRQ2_RS03885 PF04232 Stage V sporulation protein S (SpoVS) TRQ2_RS03890 PF00005 ABC transporter TRQ2_RS03895 PF01032 FecCD transport family TRQ2_RS03900 PF01497 Periplasmic binding protein TRQ2_RS03905 PF01980 tRNA-methyltransferase O TRQ2_RS03915 PF00072 Response regulator receiver domain TRQ2_RS03915 PF09308 LuxQ, periplasmic TRQ2_RS03915 PF00512 His Kinase A (phospho-acceptor) domain TRQ2_RS03915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRQ2_RS03920 PF01966 HD domain TRQ2_RS03920 PF00072 Response regulator receiver domain TRQ2_RS03930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TRQ2_RS03930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TRQ2_RS03930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TRQ2_RS03930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TRQ2_RS03935 PF00795 Carbon-nitrogen hydrolase TRQ2_RS03935 PF02540 NAD synthase TRQ2_RS03940 PF01938 TRAM domain TRQ2_RS03940 PF00919 Uncharacterized protein family UPF0004 TRQ2_RS03940 PF04055 Radical SAM superfamily TRQ2_RS03985 PF17764 3′ DNA-binding domain (3′BD) TRQ2_RS03985 PF04851 Type III restriction enzyme, res subunit TRQ2_RS03985 PF18074 Primosomal protein N C-terminal domain TRQ2_RS03985 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TRQ2_RS03990 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TRQ2_RS03990 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TRQ2_RS04000 PF00550 Phosphopantetheine attachment site TRQ2_RS04005 PF03030 Inorganic H+ pyrophosphatase TRQ2_RS04010 PF17915 Reverse gyrase zinc finger TRQ2_RS04010 PF00270 DEAD/DEAH box helicase TRQ2_RS04010 PF01751 Toprim domain TRQ2_RS04010 PF01131 DNA topoisomerase TRQ2_RS04015 PF05221 S-adenosyl-L-homocysteine hydrolase TRQ2_RS04015 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TRQ2_RS04030 PF06971 Putative DNA-binding protein N-terminus TRQ2_RS04030 PF02629 CoA binding domain TRQ2_RS04035 PF13603 Leucyl-tRNA synthetase, Domain 2 TRQ2_RS04035 PF00133 tRNA synthetases class I (I, L, M and V) TRQ2_RS04035 PF08264 Anticodon-binding domain of tRNA TRQ2_RS04035 PF09334 tRNA synthetases class I (M) TRQ2_RS04040 PF01676 Metalloenzyme superfamily TRQ2_RS04045 PF08245 Mur ligase middle domain TRQ2_RS04045 PF02875 Mur ligase family, glutamate ligase domain TRQ2_RS04050 PF01330 RuvA N terminal domain TRQ2_RS04050 PF07499 RuvA, C-terminal domain TRQ2_RS04070 PF00348 Polyprenyl synthetase TRQ2_RS04080 PF01725 Ham1 family TRQ2_RS04085 PF01790 Prolipoprotein diacylglyceryl transferase TRQ2_RS04100 PF00245 Alkaline phosphatase TRQ2_RS04105 PF01842 ACT domain TRQ2_RS04105 PF00800 Prephenate dehydratase TRQ2_RS04105 PF01817 Chorismate mutase type II TRQ2_RS04125 PF01783 Ribosomal L32p protein family TRQ2_RS04130 PF02504 Fatty acid synthesis protein TRQ2_RS04135 PF01380 SIS domain TRQ2_RS04145 PF07724 AAA domain (Cdc48 subfamily) TRQ2_RS04145 PF10431 C-terminal, D2-small domain, of ClpB protein TRQ2_RS04145 PF06689 ClpX C4-type zinc finger TRQ2_RS04150 PF00814 Glycoprotease family TRQ2_RS04165 PF00990 Diguanylate cyclase, GGDEF domain TRQ2_RS04165 PF00072 Response regulator receiver domain TRQ2_RS04170 PF00425 chorismate binding enzyme TRQ2_RS04170 PF04715 Anthranilate synthase component I, N terminal region TRQ2_RS04175 PF00117 Glutamine amidotransferase class-I TRQ2_RS04175 PF00591 Glycosyl transferase family, a/b domain TRQ2_RS04175 PF02885 Glycosyl transferase family, helical bundle domain TRQ2_RS04180 PF00218 Indole-3-glycerol phosphate synthase TRQ2_RS04185 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TRQ2_RS04190 PF00291 Pyridoxal-phosphate dependent enzyme TRQ2_RS04195 PF00290 Tryptophan synthase alpha chain TRQ2_RS04200 PF04055 Radical SAM superfamily TRQ2_RS04210 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRQ2_RS04215 PF00857 Isochorismatase family TRQ2_RS04220 PF00669 Bacterial flagellin N-terminal helical region TRQ2_RS04220 PF00700 Bacterial flagellin C-terminal helical region TRQ2_RS04225 PF07690 Major Facilitator Superfamily TRQ2_RS04235 PF00364 Biotin-requiring enzyme TRQ2_RS04235 PF02436 Conserved carboxylase domain TRQ2_RS04235 PF00682 HMGL-like TRQ2_RS04245 PF00486 Transcriptional regulatory protein, C terminal TRQ2_RS04245 PF00072 Response regulator receiver domain TRQ2_RS04250 PF00950 ABC 3 transport family TRQ2_RS04255 PF00005 ABC transporter TRQ2_RS04260 PF01297 Zinc-uptake complex component A periplasmic TRQ2_RS04275 PF00881 Nitroreductase family TRQ2_RS04285 PF02867 Ribonucleotide reductase, barrel domain TRQ2_RS04285 PF00317 Ribonucleotide reductase, all-alpha domain TRQ2_RS04285 PF03477 ATP cone domain TRQ2_RS04295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TRQ2_RS04295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TRQ2_RS04300 PF00005 ABC transporter TRQ2_RS04310 PF01522 Polysaccharide deacetylase TRQ2_RS04315 PF02653 Branched-chain amino acid transport system / permease component TRQ2_RS04320 PF00465 Iron-containing alcohol dehydrogenase TRQ2_RS04325 PF01325 Iron dependent repressor, N-terminal DNA binding domain TRQ2_RS04325 PF00480 ROK family TRQ2_RS04335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TRQ2_RS04350 PF02653 Branched-chain amino acid transport system / permease component TRQ2_RS04355 PF02653 Branched-chain amino acid transport system / permease component TRQ2_RS04360 PF00005 ABC transporter TRQ2_RS04365 PF02608 ABC transporter substrate-binding protein PnrA-like TRQ2_RS04375 PF00533 BRCA1 C Terminus (BRCT) domain TRQ2_RS04375 PF12826 Helix-hairpin-helix motif TRQ2_RS04375 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TRQ2_RS04375 PF03120 NAD-dependent DNA ligase OB-fold domain TRQ2_RS04375 PF01653 NAD-dependent DNA ligase adenylation domain TRQ2_RS04385 PF09269 Domain of unknown function (DUF1967) TRQ2_RS04385 PF01018 GTP1/OBG TRQ2_RS04385 PF01926 50S ribosome-binding GTPase TRQ2_RS04390 PF01467 Cytidylyltransferase-like TRQ2_RS04395 PF01207 Dihydrouridine synthase (Dus) TRQ2_RS04400 PF02915 Rubrerythrin TRQ2_RS04405 PF00482 Type II secretion system (T2SS), protein F TRQ2_RS04435 PF07660 Secretin and TonB N terminus short domain TRQ2_RS04435 PF03958 Bacterial type II/III secretion system short domain TRQ2_RS04435 PF00263 Bacterial type II and III secretion system protein TRQ2_RS04435 PF11741 AMIN domain TRQ2_RS04440 PF01875 Memo-like protein TRQ2_RS04445 PF03023 Lipid II flippase MurJ TRQ2_RS04460 PF07196 Flagellin hook IN motif TRQ2_RS04460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TRQ2_RS04465 PF00669 Bacterial flagellin N-terminal helical region TRQ2_RS04470 PF02623 FliW protein TRQ2_RS04475 PF01497 Periplasmic binding protein TRQ2_RS04480 PF01032 FecCD transport family TRQ2_RS04485 PF00005 ABC transporter TRQ2_RS04490 PF05448 Acetyl xylan esterase (AXE1) TRQ2_RS04495 PF01915 Glycosyl hydrolase family 3 C-terminal domain TRQ2_RS04495 PF14310 Fibronectin type III-like domain TRQ2_RS04495 PF00933 Glycosyl hydrolase family 3 N terminal domain TRQ2_RS04500 PF00005 ABC transporter TRQ2_RS04500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS04505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS04505 PF00005 ABC transporter TRQ2_RS04510 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS04510 PF12911 N-terminal TM domain of oligopeptide transport permease C TRQ2_RS04515 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS04520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TRQ2_RS04525 PF00331 Glycosyl hydrolase family 10 TRQ2_RS04530 PF03786 D-mannonate dehydratase (UxuA) TRQ2_RS04535 PF01232 Mannitol dehydrogenase Rossmann domain TRQ2_RS04535 PF08125 Mannitol dehydrogenase C-terminal domain TRQ2_RS04545 PF01081 KDPG and KHG aldolase TRQ2_RS04550 PF09339 IclR helix-turn-helix domain TRQ2_RS04550 PF01614 Bacterial transcriptional regulator TRQ2_RS04555 PF02614 Glucuronate isomerase TRQ2_RS04565 PF06452 Carbohydrate family 9 binding domain-like TRQ2_RS04565 PF02018 Carbohydrate binding domain TRQ2_RS04565 PF00331 Glycosyl hydrolase family 10 TRQ2_RS04570 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS04575 PF12911 N-terminal TM domain of oligopeptide transport permease C TRQ2_RS04575 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS04580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS04580 PF00005 ABC transporter TRQ2_RS04585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS04585 PF00005 ABC transporter TRQ2_RS04590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TRQ2_RS04595 PF03648 Glycosyl hydrolase family 67 N-terminus TRQ2_RS04595 PF07488 Glycosyl hydrolase family 67 middle domain TRQ2_RS04595 PF07477 Glycosyl hydrolase family 67 C-terminus TRQ2_RS04615 PF04023 FeoA domain TRQ2_RS04615 PF07664 Ferrous iron transport protein B C terminus TRQ2_RS04615 PF17910 FeoB cytosolic helical domain TRQ2_RS04615 PF02421 Ferrous iron transport protein B TRQ2_RS04615 PF07670 Nucleoside recognition TRQ2_RS04625 PF04015 Domain of unknown function (DUF362) TRQ2_RS04635 PF01385 Probable transposase TRQ2_RS04635 PF12323 Helix-turn-helix domain TRQ2_RS04635 PF07282 Putative transposase DNA-binding domain TRQ2_RS04650 PF00005 ABC transporter TRQ2_RS04650 PF00664 ABC transporter transmembrane region TRQ2_RS04655 PF01321 Creatinase/Prolidase N-terminal domain TRQ2_RS04655 PF00557 Metallopeptidase family M24 TRQ2_RS04660 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TRQ2_RS04660 PF02152 Dihydroneopterin aldolase TRQ2_RS04665 PF00809 Pterin binding enzyme TRQ2_RS04670 PF02649 Type I GTP cyclohydrolase folE2 TRQ2_RS04675 PF01242 6-pyruvoyl tetrahydropterin synthase TRQ2_RS04680 PF01966 HD domain TRQ2_RS04685 PF03266 NTPase TRQ2_RS04705 PF00480 ROK family TRQ2_RS04715 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS04725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS04725 PF00005 ABC transporter TRQ2_RS04730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS04730 PF00005 ABC transporter TRQ2_RS04740 PF14310 Fibronectin type III-like domain TRQ2_RS04740 PF01915 Glycosyl hydrolase family 3 C-terminal domain TRQ2_RS04740 PF00933 Glycosyl hydrolase family 3 N terminal domain TRQ2_RS04745 PF00722 Glycosyl hydrolases family 16 TRQ2_RS04750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRQ2_RS04755 PF01119 DNA mismatch repair protein, C-terminal domain TRQ2_RS04755 PF08676 MutL C terminal dimerisation domain TRQ2_RS04760 PF02641 Uncharacterized ACR, COG1993 TRQ2_RS04765 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TRQ2_RS04775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TRQ2_RS04780 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TRQ2_RS04780 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TRQ2_RS04790 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TRQ2_RS04795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRQ2_RS04815 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TRQ2_RS04815 PF00037 4Fe-4S binding domain TRQ2_RS04815 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TRQ2_RS04825 PF04199 Putative cyclase TRQ2_RS04835 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TRQ2_RS04835 PF13378 Enolase C-terminal domain-like TRQ2_RS04845 PF02872 5'-nucleotidase, C-terminal domain TRQ2_RS04845 PF00149 Calcineurin-like phosphoesterase TRQ2_RS04855 PF12850 Calcineurin-like phosphoesterase superfamily domain TRQ2_RS04860 PF00749 tRNA synthetases class I (E and Q), catalytic domain TRQ2_RS04865 PF00313 'Cold-shock' DNA-binding domain TRQ2_RS04870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TRQ2_RS04870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TRQ2_RS04875 PF01894 Uncharacterised protein family UPF0047 TRQ2_RS04885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TRQ2_RS04890 PF13654 AAA domain TRQ2_RS04890 PF05362 Lon protease (S16) C-terminal proteolytic domain TRQ2_RS04895 PF02361 Cobalt transport protein TRQ2_RS04900 PF00056 lactate/malate dehydrogenase, NAD binding domain TRQ2_RS04900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TRQ2_RS04910 PF04493 Endonuclease V TRQ2_RS04925 PF00919 Uncharacterized protein family UPF0004 TRQ2_RS04925 PF04055 Radical SAM superfamily TRQ2_RS04925 PF18693 TRAM domain TRQ2_RS04930 PF01066 CDP-alcohol phosphatidyltransferase TRQ2_RS04940 PF00154 recA bacterial DNA recombination protein TRQ2_RS04945 PF02631 RecX family TRQ2_RS04950 PF00013 KH domain TRQ2_RS04950 PF01966 HD domain TRQ2_RS04950 PF12072 Domain of unknown function (DUF3552) TRQ2_RS04955 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS04980 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain TRQ2_RS04980 PF06165 Glycosyltransferase family 36 TRQ2_RS04985 PF00232 Glycosyl hydrolase family 1 TRQ2_RS04990 PF01547 Bacterial extracellular solute-binding protein TRQ2_RS04995 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS05000 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS05005 PF13407 Periplasmic binding protein domain TRQ2_RS05010 PF02653 Branched-chain amino acid transport system / permease component TRQ2_RS05015 PF00005 ABC transporter TRQ2_RS05020 PF01325 Iron dependent repressor, N-terminal DNA binding domain TRQ2_RS05020 PF00480 ROK family TRQ2_RS05030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TRQ2_RS05030 PF00128 Alpha amylase, catalytic domain TRQ2_RS05030 PF03714 Bacterial pullanase-associated domain TRQ2_RS05035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TRQ2_RS05035 PF02806 Alpha amylase, C-terminal all-beta domain TRQ2_RS05035 PF00128 Alpha amylase, catalytic domain TRQ2_RS05055 PF00128 Alpha amylase, catalytic domain TRQ2_RS05060 PF01547 Bacterial extracellular solute-binding protein TRQ2_RS05065 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS05065 PF14785 Maltose transport system permease protein MalF P2 domain TRQ2_RS05070 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS05075 PF00128 Alpha amylase, catalytic domain TRQ2_RS05080 PF02056 Family 4 glycosyl hydrolase TRQ2_RS05080 PF11975 Family 4 glycosyl hydrolase C-terminal domain TRQ2_RS05085 PF00672 HAMP domain TRQ2_RS05085 PF02743 Cache domain TRQ2_RS05085 PF00211 Adenylate and Guanylate cyclase catalytic domain TRQ2_RS05100 PF00990 Diguanylate cyclase, GGDEF domain TRQ2_RS05100 PF08448 PAS fold TRQ2_RS05105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TRQ2_RS05105 PF01872 RibD C-terminal domain TRQ2_RS05110 PF00677 Lumazine binding domain TRQ2_RS05115 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TRQ2_RS05115 PF00925 GTP cyclohydrolase II TRQ2_RS05120 PF00885 6,7-dimethyl-8-ribityllumazine synthase TRQ2_RS05130 PF01145 SPFH domain / Band 7 family TRQ2_RS05135 PF01145 SPFH domain / Band 7 family TRQ2_RS05135 PF12221 Bacterial membrane protein N terminal TRQ2_RS05145 PF02568 Thiamine biosynthesis protein (ThiI) TRQ2_RS05145 PF00117 Glutamine amidotransferase class-I TRQ2_RS05145 PF00958 GMP synthase C terminal domain TRQ2_RS05155 PF02417 Chromate transporter TRQ2_RS05160 PF10458 Valyl tRNA synthetase tRNA binding arm TRQ2_RS05160 PF00133 tRNA synthetases class I (I, L, M and V) TRQ2_RS05160 PF08264 Anticodon-binding domain of tRNA TRQ2_RS05185 PF18211 Csm1 subunit domain B TRQ2_RS05195 PF03787 RAMP superfamily TRQ2_RS05205 PF03787 RAMP superfamily TRQ2_RS05225 PF00684 DnaJ central domain TRQ2_RS05225 PF01556 DnaJ C terminal domain TRQ2_RS05225 PF00226 DnaJ domain TRQ2_RS05245 PF18019 HD domain TRQ2_RS05245 PF00270 DEAD/DEAH box helicase TRQ2_RS05245 PF18395 Cas3 C-terminal domain TRQ2_RS05255 PF01867 CRISPR associated protein Cas1 TRQ2_RS05260 PF09827 CRISPR associated protein Cas2 TRQ2_RS05270 PF00534 Glycosyl transferases group 1 TRQ2_RS05285 PF09701 CRISPR-associated protein (Cas_Cmr5) TRQ2_RS05310 PF03707 Bacterial signalling protein N terminal repeat TRQ2_RS05310 PF00990 Diguanylate cyclase, GGDEF domain TRQ2_RS05310 PF00563 EAL domain TRQ2_RS05340 PF00202 Aminotransferase class-III TRQ2_RS05345 PF00696 Amino acid kinase family TRQ2_RS05350 PF01960 ArgJ family TRQ2_RS05355 PF01118 Semialdehyde dehydrogenase, NAD binding domain TRQ2_RS05355 PF02774 Semialdehyde dehydrogenase, dimerisation domain TRQ2_RS05360 PF00206 Lyase TRQ2_RS05365 PF00764 Arginosuccinate synthase TRQ2_RS05380 PF17384 RimP C-terminal SH3 domain TRQ2_RS05380 PF02576 RimP N-terminal domain TRQ2_RS05385 PF08529 NusA N-terminal domain TRQ2_RS05385 PF00575 S1 RNA binding domain TRQ2_RS05385 PF13184 NusA-like KH domain TRQ2_RS05390 PF01475 Ferric uptake regulator family TRQ2_RS05400 PF01676 Metalloenzyme superfamily TRQ2_RS05400 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TRQ2_RS05410 PF02734 DAK2 domain TRQ2_RS05410 PF13684 Dihydroxyacetone kinase family TRQ2_RS05420 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TRQ2_RS05420 PF02779 Transketolase, pyrimidine binding domain TRQ2_RS05420 PF02780 Transketolase, C-terminal domain TRQ2_RS05425 PF02609 Exonuclease VII small subunit TRQ2_RS05430 PF13742 OB-fold nucleic acid binding domain TRQ2_RS05430 PF02601 Exonuclease VII, large subunit TRQ2_RS05435 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TRQ2_RS05435 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TRQ2_RS05440 PF01268 Formate--tetrahydrofolate ligase TRQ2_RS05445 PF01029 NusB family TRQ2_RS05455 PF08207 Elongation factor P (EF-P) KOW-like domain TRQ2_RS05455 PF01132 Elongation factor P (EF-P) OB domain TRQ2_RS05455 PF09285 Elongation factor P, C-terminal TRQ2_RS05460 PF02780 Transketolase, C-terminal domain TRQ2_RS05460 PF02779 Transketolase, pyrimidine binding domain TRQ2_RS05460 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TRQ2_RS05465 PF00271 Helicase conserved C-terminal domain TRQ2_RS05465 PF04851 Type III restriction enzyme, res subunit TRQ2_RS05465 PF02151 UvrB/uvrC motif TRQ2_RS05465 PF12344 Ultra-violet resistance protein B TRQ2_RS05465 PF17757 UvrB interaction domain TRQ2_RS05500 PF00871 Acetokinase family TRQ2_RS05505 PF01515 Phosphate acetyl/butaryl transferase TRQ2_RS05510 PF00871 Acetokinase family TRQ2_RS05525 PF00150 Cellulase (glycosyl hydrolase family 5) TRQ2_RS05525 PF00404 Dockerin type I domain TRQ2_RS05525 PF03425 Carbohydrate binding domain (family 11) TRQ2_RS05530 PF00005 ABC transporter TRQ2_RS05530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS05535 PF00005 ABC transporter TRQ2_RS05535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS05540 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS05540 PF12911 N-terminal TM domain of oligopeptide transport permease C TRQ2_RS05545 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS05550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TRQ2_RS05560 PF01212 Beta-eliminating lyase TRQ2_RS05565 PF00248 Aldo/keto reductase family TRQ2_RS05570 PF13344 Haloacid dehalogenase-like hydrolase TRQ2_RS05575 PF08032 RNA 2'-O ribose methyltransferase substrate binding TRQ2_RS05575 PF00588 SpoU rRNA Methylase family TRQ2_RS05580 PF00636 Ribonuclease III domain TRQ2_RS05590 PF02535 ZIP Zinc transporter TRQ2_RS05595 PF01048 Phosphorylase superfamily TRQ2_RS05600 PF00772 DnaB-like helicase N terminal domain TRQ2_RS05600 PF03796 DnaB-like helicase C terminal domain TRQ2_RS05610 PF01895 PhoU domain TRQ2_RS05615 PF01513 ATP-NAD kinase TRQ2_RS05620 PF02325 YGGT family TRQ2_RS05625 PF01168 Alanine racemase, N-terminal domain TRQ2_RS05630 PF05496 Holliday junction DNA helicase RuvB P-loop domain TRQ2_RS05630 PF17864 RuvB AAA lid domain TRQ2_RS05630 PF05491 RuvB C-terminal winged helix domain TRQ2_RS05640 PF02548 Ketopantoate hydroxymethyltransferase TRQ2_RS05650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TRQ2_RS05650 PF01411 tRNA synthetases class II (A) TRQ2_RS05650 PF02272 DHHA1 domain TRQ2_RS05655 PF01813 ATP synthase subunit D TRQ2_RS05660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TRQ2_RS05660 PF02874 ATP synthase alpha/beta family, beta-barrel domain TRQ2_RS05665 PF02874 ATP synthase alpha/beta family, beta-barrel domain TRQ2_RS05665 PF16886 ATPsynthase alpha/beta subunit N-term extension TRQ2_RS05665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TRQ2_RS05685 PF01496 V-type ATPase 116kDa subunit family TRQ2_RS05710 PF01979 Amidohydrolase family TRQ2_RS05725 PF13673 Acetyltransferase (GNAT) domain TRQ2_RS05730 PF05190 MutS family domain IV TRQ2_RS05730 PF00488 MutS domain V TRQ2_RS05730 PF05192 MutS domain III TRQ2_RS05730 PF01624 MutS domain I TRQ2_RS05730 PF05188 MutS domain II TRQ2_RS05735 PF00834 Ribulose-phosphate 3 epimerase family TRQ2_RS05740 PF16745 RsgA N-terminal domain TRQ2_RS05740 PF03193 RsgA GTPase TRQ2_RS05750 PF04055 Radical SAM superfamily TRQ2_RS05755 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TRQ2_RS05755 PF01565 FAD binding domain TRQ2_RS05760 PF09186 Domain of unknown function (DUF1949) TRQ2_RS05760 PF01205 Uncharacterized protein family UPF0029 TRQ2_RS05775 PF03668 P-loop ATPase protein family TRQ2_RS05780 PF01933 Uncharacterised protein family UPF0052 TRQ2_RS05785 PF14527 WhiA LAGLIDADG-like domain TRQ2_RS05785 PF02650 WhiA C-terminal HTH domain TRQ2_RS05795 PF01272 Transcription elongation factor, GreA/GreB, C-term TRQ2_RS05795 PF03449 Transcription elongation factor, N-terminal TRQ2_RS05800 PF01336 OB-fold nucleic acid binding domain TRQ2_RS05800 PF00152 tRNA synthetases class II (D, K and N) TRQ2_RS05810 PF00884 Sulfatase TRQ2_RS05835 PF00155 Aminotransferase class I and II TRQ2_RS05840 PF10672 S-adenosylmethionine-dependent methyltransferase TRQ2_RS05840 PF17785 PUA-like domain TRQ2_RS05845 PF06750 Bacterial Peptidase A24 N-terminal domain TRQ2_RS05845 PF01478 Type IV leader peptidase family TRQ2_RS05855 PF02568 Thiamine biosynthesis protein (ThiI) TRQ2_RS05855 PF02926 THUMP domain TRQ2_RS05865 PF00266 Aminotransferase class-V TRQ2_RS05875 PF04025 Domain of unknown function (DUF370) TRQ2_RS05880 PF00625 Guanylate kinase TRQ2_RS05885 PF01192 RNA polymerase Rpb6 TRQ2_RS05890 PF02441 Flavoprotein TRQ2_RS05890 PF04127 DNA / pantothenate metabolism flavoprotein TRQ2_RS05895 PF03734 L,D-transpeptidase catalytic domain TRQ2_RS05895 PF01476 LysM domain TRQ2_RS05900 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TRQ2_RS05900 PF00013 KH domain TRQ2_RS05900 PF01138 3' exoribonuclease family, domain 1 TRQ2_RS05900 PF03725 3' exoribonuclease family, domain 2 TRQ2_RS05900 PF00575 S1 RNA binding domain TRQ2_RS05905 PF01197 Ribosomal protein L31 TRQ2_RS05910 PF00313 'Cold-shock' DNA-binding domain TRQ2_RS05915 PF00072 Response regulator receiver domain TRQ2_RS05930 PF11871 Domain of unknown function (DUF3391) TRQ2_RS05930 PF01966 HD domain TRQ2_RS05960 PF01312 FlhB HrpN YscU SpaS Family TRQ2_RS05985 PF01261 Xylose isomerase-like TIM barrel TRQ2_RS05990 PF01546 Peptidase family M20/M25/M40 TRQ2_RS05990 PF07687 Peptidase dimerisation domain TRQ2_RS06000 PF05175 Methyltransferase small domain TRQ2_RS06005 PF00005 ABC transporter TRQ2_RS06010 PF01975 Survival protein SurE TRQ2_RS06015 PF01327 Polypeptide deformylase TRQ2_RS06030 PF02772 S-adenosylmethionine synthetase, central domain TRQ2_RS06030 PF00438 S-adenosylmethionine synthetase, N-terminal domain TRQ2_RS06030 PF02773 S-adenosylmethionine synthetase, C-terminal domain TRQ2_RS06035 PF01649 Ribosomal protein S20 TRQ2_RS06045 PF00486 Transcriptional regulatory protein, C terminal TRQ2_RS06045 PF00072 Response regulator receiver domain TRQ2_RS06050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRQ2_RS06050 PF00512 His Kinase A (phospho-acceptor) domain TRQ2_RS06050 PF00989 PAS fold TRQ2_RS06050 PF16736 Single Cache-like TRQ2_RS06055 PF00591 Glycosyl transferase family, a/b domain TRQ2_RS06055 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TRQ2_RS06055 PF02885 Glycosyl transferase family, helical bundle domain TRQ2_RS06065 PF14492 Elongation Factor G, domain II TRQ2_RS06065 PF03764 Elongation factor G, domain IV TRQ2_RS06065 PF00009 Elongation factor Tu GTP binding domain TRQ2_RS06065 PF00679 Elongation factor G C-terminus TRQ2_RS06070 PF16657 Maltogenic Amylase, C-terminal domain TRQ2_RS06070 PF02903 Alpha amylase, N-terminal ig-like domain TRQ2_RS06070 PF00128 Alpha amylase, catalytic domain TRQ2_RS06080 PF01966 HD domain TRQ2_RS06090 PF03885 Protein of unknown function (DUF327) TRQ2_RS06095 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TRQ2_RS06095 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TRQ2_RS06100 PF02445 Quinolinate synthetase A protein TRQ2_RS06105 PF01958 Domain of unknown function DUF108 TRQ2_RS06105 PF03447 Homoserine dehydrogenase, NAD binding domain TRQ2_RS06130 PF02082 Transcriptional regulator TRQ2_RS06135 PF01040 UbiA prenyltransferase family TRQ2_RS06145 PF01012 Electron transfer flavoprotein domain TRQ2_RS06150 PF01012 Electron transfer flavoprotein domain TRQ2_RS06150 PF00766 Electron transfer flavoprotein FAD-binding domain TRQ2_RS06170 PF00348 Polyprenyl synthetase TRQ2_RS06180 PF02310 B12 binding domain TRQ2_RS06180 PF04055 Radical SAM superfamily TRQ2_RS06190 PF02119 Flagellar P-ring protein TRQ2_RS06195 PF02107 Flagellar L-ring protein TRQ2_RS06205 PF00460 Flagella basal body rod protein TRQ2_RS06205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TRQ2_RS06210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TRQ2_RS06210 PF00460 Flagella basal body rod protein TRQ2_RS06230 PF01368 DHH family TRQ2_RS06230 PF02272 DHHA1 domain TRQ2_RS06230 PF17768 RecJ OB domain TRQ2_RS06230 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TRQ2_RS06235 PF01966 HD domain TRQ2_RS06240 PF02719 Polysaccharide biosynthesis protein TRQ2_RS06245 PF00953 Glycosyl transferase family 4 TRQ2_RS06250 PF07136 Protein of unknown function (DUF1385) TRQ2_RS06255 PF01871 AMMECR1 TRQ2_RS06265 PF02424 ApbE family TRQ2_RS06280 PF02545 Maf-like protein TRQ2_RS06285 PF04002 RadC-like JAB domain TRQ2_RS06295 PF01791 DeoC/LacD family aldolase TRQ2_RS06305 PF01702 Queuine tRNA-ribosyltransferase TRQ2_RS06320 PF00708 Acylphosphatase TRQ2_RS06325 PF00448 SRP54-type protein, GTPase domain TRQ2_RS06325 PF02978 Signal peptide binding domain TRQ2_RS06325 PF02881 SRP54-type protein, helical bundle domain TRQ2_RS06330 PF00886 Ribosomal protein S16 TRQ2_RS06340 PF01782 RimM N-terminal domain TRQ2_RS06340 PF05239 PRC-barrel domain TRQ2_RS06345 PF01746 tRNA (Guanine-1)-methyltransferase TRQ2_RS06350 PF09936 SAM-dependent RNA methyltransferase TRQ2_RS06355 PF01245 Ribosomal protein L19 TRQ2_RS06360 PF10502 Signal peptidase, peptidase S26 TRQ2_RS06370 PF01416 tRNA pseudouridine synthase TRQ2_RS06380 PF01479 S4 domain TRQ2_RS06380 PF01728 FtsJ-like methyltransferase TRQ2_RS06390 PF07516 SecA Wing and Scaffold domain TRQ2_RS06390 PF01043 SecA preprotein cross-linking domain TRQ2_RS06390 PF07517 SecA DEAD-like domain TRQ2_RS06390 PF00271 Helicase conserved C-terminal domain TRQ2_RS06395 PF03462 PCRF domain TRQ2_RS06395 PF00472 RF-1 domain TRQ2_RS06400 PF00072 Response regulator receiver domain TRQ2_RS06400 PF02954 Bacterial regulatory protein, Fis family TRQ2_RS06400 PF00158 Sigma-54 interaction domain TRQ2_RS06420 PF00156 Phosphoribosyl transferase domain TRQ2_RS06425 PF05161 MOFRL family TRQ2_RS06425 PF13660 Domain of unknown function (DUF4147) TRQ2_RS06440 PF00990 Diguanylate cyclase, GGDEF domain TRQ2_RS06475 PF05198 Translation initiation factor IF-3, N-terminal domain TRQ2_RS06475 PF00707 Translation initiation factor IF-3, C-terminal domain TRQ2_RS06480 PF01632 Ribosomal protein L35 TRQ2_RS06485 PF00453 Ribosomal protein L20 TRQ2_RS06490 PF10609 NUBPL iron-transfer P-loop NTPase TRQ2_RS06495 PF00990 Diguanylate cyclase, GGDEF domain TRQ2_RS06500 PF01368 DHH family TRQ2_RS06500 PF02272 DHHA1 domain TRQ2_RS06505 PF01048 Phosphorylase superfamily TRQ2_RS06510 PF01168 Alanine racemase, N-terminal domain TRQ2_RS06515 PF04542 Sigma-70 region 2 TRQ2_RS06515 PF08281 Sigma-70, region 4 TRQ2_RS06530 PF00919 Uncharacterized protein family UPF0004 TRQ2_RS06530 PF18693 TRAM domain TRQ2_RS06530 PF04055 Radical SAM superfamily TRQ2_RS06535 PF02829 3H domain TRQ2_RS06535 PF08279 HTH domain TRQ2_RS06540 PF07690 Major Facilitator Superfamily TRQ2_RS06545 PF00696 Amino acid kinase family TRQ2_RS06550 PF00889 Elongation factor TS TRQ2_RS06555 PF00575 S1 RNA binding domain TRQ2_RS06555 PF10150 Ribonuclease E/G family TRQ2_RS06560 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TRQ2_RS06560 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus TRQ2_RS06565 PF02645 Uncharacterised protein, DegV family COG1307 TRQ2_RS06570 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TRQ2_RS06575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TRQ2_RS06575 PF02874 ATP synthase alpha/beta family, beta-barrel domain TRQ2_RS06580 PF00231 ATP synthase TRQ2_RS06585 PF00306 ATP synthase alpha/beta chain, C terminal domain TRQ2_RS06585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TRQ2_RS06585 PF02874 ATP synthase alpha/beta family, beta-barrel domain TRQ2_RS06590 PF00213 ATP synthase delta (OSCP) subunit TRQ2_RS06595 PF00430 ATP synthase B/B' CF(0) TRQ2_RS06600 PF00137 ATP synthase subunit C TRQ2_RS06605 PF00119 ATP synthase A chain TRQ2_RS06620 PF13690 Chemotaxis phosphatase CheX TRQ2_RS06625 PF01612 3'-5' exonuclease TRQ2_RS06625 PF01367 5'-3' exonuclease, C-terminal SAM fold TRQ2_RS06625 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TRQ2_RS06625 PF00476 DNA polymerase family A TRQ2_RS06630 PF02627 Carboxymuconolactone decarboxylase family TRQ2_RS06635 PF03009 Glycerophosphoryl diester phosphodiesterase family TRQ2_RS06645 PF06421 GTP-binding protein LepA C-terminus TRQ2_RS06645 PF03144 Elongation factor Tu domain 2 TRQ2_RS06645 PF00009 Elongation factor Tu GTP binding domain TRQ2_RS06645 PF00679 Elongation factor G C-terminus TRQ2_RS06650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TRQ2_RS06650 PF00703 Glycosyl hydrolases family 2 TRQ2_RS06650 PF16353 Domain of unknown function(DUF4981) TRQ2_RS06650 PF02837 Glycosyl hydrolases family 2, sugar binding domain TRQ2_RS06650 PF02929 Beta galactosidase small chain TRQ2_RS06660 PF01195 Peptidyl-tRNA hydrolase TRQ2_RS06665 PF01386 Ribosomal L25p family TRQ2_RS06665 PF14693 Ribosomal protein TL5, C-terminal domain TRQ2_RS06670 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TRQ2_RS06670 PF14572 Phosphoribosyl synthetase-associated domain TRQ2_RS06675 PF14602 Hexapeptide repeat of succinyl-transferase TRQ2_RS06675 PF00132 Bacterial transferase hexapeptide (six repeats) TRQ2_RS06675 PF12804 MobA-like NTP transferase domain TRQ2_RS06690 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TRQ2_RS06695 PF00004 ATPase family associated with various cellular activities (AAA) TRQ2_RS06695 PF05362 Lon protease (S16) C-terminal proteolytic domain TRQ2_RS06695 PF02190 ATP-dependent protease La (LON) substrate-binding domain TRQ2_RS06705 PF12320 Type 5 capsule protein repressor C-terminal domain TRQ2_RS06705 PF00149 Calcineurin-like phosphoesterase TRQ2_RS06710 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system TRQ2_RS06720 PF00005 ABC transporter TRQ2_RS06725 PF00970 Oxidoreductase FAD-binding domain TRQ2_RS06725 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TRQ2_RS06725 PF00175 Oxidoreductase NAD-binding domain TRQ2_RS06730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TRQ2_RS06730 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRQ2_RS06735 PF00186 Dihydrofolate reductase TRQ2_RS06740 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain TRQ2_RS06740 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain TRQ2_RS06740 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TRQ2_RS06740 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TRQ2_RS06750 PF00251 Glycosyl hydrolases family 32 N-terminal domain TRQ2_RS06750 PF08244 Glycosyl hydrolases family 32 C terminal TRQ2_RS06755 PF00459 Inositol monophosphatase family TRQ2_RS06765 PF01458 Uncharacterized protein family (UPF0051) TRQ2_RS06770 PF00005 ABC transporter TRQ2_RS06775 PF01066 CDP-alcohol phosphatidyltransferase TRQ2_RS06775 PF00483 Nucleotidyl transferase TRQ2_RS06780 PF12804 MobA-like NTP transferase domain TRQ2_RS06780 PF00132 Bacterial transferase hexapeptide (six repeats) TRQ2_RS06810 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TRQ2_RS06810 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TRQ2_RS06810 PF00037 4Fe-4S binding domain TRQ2_RS06815 PF02906 Iron only hydrogenase large subunit, C-terminal domain TRQ2_RS06815 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TRQ2_RS06815 PF02256 Iron hydrogenase small subunit TRQ2_RS06815 PF00037 4Fe-4S binding domain TRQ2_RS06820 PF06971 Putative DNA-binding protein N-terminus TRQ2_RS06820 PF02629 CoA binding domain TRQ2_RS06825 PF17200 Single Cache domain 2 TRQ2_RS06825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRQ2_RS06825 PF00672 HAMP domain TRQ2_RS06830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TRQ2_RS06830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TRQ2_RS06835 PF04309 Glycerol-3-phosphate responsive antiterminator TRQ2_RS06840 PF04324 BFD-like [2Fe-2S] binding domain TRQ2_RS06840 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRQ2_RS06845 PF04324 BFD-like [2Fe-2S] binding domain TRQ2_RS06845 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRQ2_RS06865 PF00398 Ribosomal RNA adenine dimethylase TRQ2_RS06870 PF09210 Domain of unknown function (DUF1957) TRQ2_RS06870 PF03065 Glycosyl hydrolase family 57 TRQ2_RS06880 PF03061 Thioesterase superfamily TRQ2_RS06880 PF01008 Initiation factor 2 subunit family TRQ2_RS06885 PF00152 tRNA synthetases class II (D, K and N) TRQ2_RS06885 PF02938 GAD domain TRQ2_RS06885 PF01336 OB-fold nucleic acid binding domain TRQ2_RS06890 PF01740 STAS domain TRQ2_RS06895 PF02224 Cytidylate kinase TRQ2_RS06900 PF02401 LytB protein TRQ2_RS06905 PF00575 S1 RNA binding domain TRQ2_RS06910 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TRQ2_RS06910 PF01926 50S ribosome-binding GTPase TRQ2_RS06915 PF02660 Glycerol-3-phosphate acyltransferase TRQ2_RS06930 PF00271 Helicase conserved C-terminal domain TRQ2_RS06930 PF00270 DEAD/DEAH box helicase TRQ2_RS06930 PF02559 CarD-like/TRCF domain TRQ2_RS06930 PF03461 TRCF domain TRQ2_RS06930 PF17757 UvrB interaction domain TRQ2_RS06935 PF04545 Sigma-70, region 4 TRQ2_RS06935 PF00140 Sigma-70 factor, region 1.2 TRQ2_RS06935 PF03979 Sigma-70 factor, region 1.1 TRQ2_RS06935 PF04539 Sigma-70 region 3 TRQ2_RS06935 PF04542 Sigma-70 region 2 TRQ2_RS06940 PF01807 CHC2 zinc finger TRQ2_RS06940 PF08275 DNA primase catalytic core, N-terminal domain TRQ2_RS06945 PF00380 Ribosomal protein S9/S16 TRQ2_RS06950 PF00572 Ribosomal protein L13 TRQ2_RS06955 PF12822 ECF transporter, substrate-specific component TRQ2_RS06960 PF01016 Ribosomal L27 protein TRQ2_RS06970 PF00829 Ribosomal prokaryotic L21 protein TRQ2_RS06985 PF02096 60Kd inner membrane protein TRQ2_RS06990 PF01809 Putative membrane protein insertion efficiency factor TRQ2_RS06995 PF00825 Ribonuclease P TRQ2_RS07000 PF00468 Ribosomal protein L34 TRQ2_RS07005 PF04227 Indigoidine synthase A like protein TRQ2_RS07010 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TRQ2_RS07010 PF12557 Cob(I)alamin adenosyltransferase N terminal TRQ2_RS07015 PF01926 50S ribosome-binding GTPase TRQ2_RS07020 PF01966 HD domain TRQ2_RS07025 PF17248 Family of unknown function (DUF5317) TRQ2_RS07030 PF02645 Uncharacterised protein, DegV family COG1307 TRQ2_RS07035 PF00480 ROK family TRQ2_RS07040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TRQ2_RS07040 PF07498 Rho termination factor, N-terminal domain TRQ2_RS07040 PF07497 Rho termination factor, RNA-binding domain TRQ2_RS07045 PF01196 Ribosomal protein L17 TRQ2_RS07050 PF01000 RNA polymerase Rpb3/RpoA insert domain TRQ2_RS07050 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TRQ2_RS07050 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TRQ2_RS07055 PF01479 S4 domain TRQ2_RS07055 PF00163 Ribosomal protein S4/S9 N-terminal domain TRQ2_RS07060 PF00411 Ribosomal protein S11 TRQ2_RS07065 PF00416 Ribosomal protein S13/S18 TRQ2_RS07070 PF00444 Ribosomal protein L36 TRQ2_RS07075 PF01176 Translation initiation factor 1A / IF-1 TRQ2_RS07080 PF00557 Metallopeptidase family M24 TRQ2_RS07085 PF05191 Adenylate kinase, active site lid TRQ2_RS07090 PF00344 SecY translocase TRQ2_RS07095 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TRQ2_RS07100 PF00327 Ribosomal protein L30p/L7e TRQ2_RS07105 PF00333 Ribosomal protein S5, N-terminal domain TRQ2_RS07105 PF03719 Ribosomal protein S5, C-terminal domain TRQ2_RS07110 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TRQ2_RS07115 PF00347 Ribosomal protein L6 TRQ2_RS07120 PF00410 Ribosomal protein S8 TRQ2_RS07125 PF00253 Ribosomal protein S14p/S29e TRQ2_RS07130 PF00673 ribosomal L5P family C-terminus TRQ2_RS07130 PF00281 Ribosomal protein L5 TRQ2_RS07135 PF00467 KOW motif TRQ2_RS07135 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TRQ2_RS07140 PF00238 Ribosomal protein L14p/L23e TRQ2_RS07145 PF00366 Ribosomal protein S17 TRQ2_RS07150 PF00831 Ribosomal L29 protein TRQ2_RS07155 PF00252 Ribosomal protein L16p/L10e TRQ2_RS07160 PF00189 Ribosomal protein S3, C-terminal domain TRQ2_RS07160 PF07650 KH domain TRQ2_RS07165 PF00237 Ribosomal protein L22p/L17e TRQ2_RS07170 PF00203 Ribosomal protein S19 TRQ2_RS07175 PF00181 Ribosomal Proteins L2, RNA binding domain TRQ2_RS07175 PF03947 Ribosomal Proteins L2, C-terminal domain TRQ2_RS07180 PF00276 Ribosomal protein L23 TRQ2_RS07185 PF00573 Ribosomal protein L4/L1 family TRQ2_RS07190 PF00297 Ribosomal protein L3 TRQ2_RS07195 PF00338 Ribosomal protein S10p/S20e TRQ2_RS07200 PF03144 Elongation factor Tu domain 2 TRQ2_RS07200 PF00009 Elongation factor Tu GTP binding domain TRQ2_RS07200 PF03143 Elongation factor Tu C-terminal domain TRQ2_RS07205 PF14492 Elongation Factor G, domain II TRQ2_RS07205 PF00009 Elongation factor Tu GTP binding domain TRQ2_RS07205 PF03144 Elongation factor Tu domain 2 TRQ2_RS07205 PF00679 Elongation factor G C-terminus TRQ2_RS07205 PF03764 Elongation factor G, domain IV TRQ2_RS07210 PF00177 Ribosomal protein S7p/S5e TRQ2_RS07215 PF00164 Ribosomal protein S12/S23 TRQ2_RS07225 PF02562 PhoH-like protein TRQ2_RS07230 PF07698 7TM receptor with intracellular HD hydrolase TRQ2_RS07230 PF07697 7TM-HD extracellular TRQ2_RS07230 PF01966 HD domain TRQ2_RS07235 PF02130 Uncharacterized protein family UPF0054 TRQ2_RS07245 PF04298 Putative neutral zinc metallopeptidase TRQ2_RS07250 PF01029 NusB family TRQ2_RS07250 PF01189 16S rRNA methyltransferase RsmB/F TRQ2_RS07255 PF05636 HIGH Nucleotidyl Transferase TRQ2_RS07270 PF07687 Peptidase dimerisation domain TRQ2_RS07270 PF01546 Peptidase family M20/M25/M40 TRQ2_RS07275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TRQ2_RS07275 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TRQ2_RS07280 PF00696 Amino acid kinase family TRQ2_RS07280 PF01842 ACT domain TRQ2_RS07280 PF13840 ACT domain TRQ2_RS07285 PF00132 Bacterial transferase hexapeptide (six repeats) TRQ2_RS07285 PF14602 Hexapeptide repeat of succinyl-transferase TRQ2_RS07285 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal TRQ2_RS07290 PF05173 Dihydrodipicolinate reductase, C-terminus TRQ2_RS07290 PF01113 Dihydrodipicolinate reductase, N-terminus TRQ2_RS07295 PF00701 Dihydrodipicolinate synthetase family TRQ2_RS07300 PF01678 Diaminopimelate epimerase TRQ2_RS07305 PF02774 Semialdehyde dehydrogenase, dimerisation domain TRQ2_RS07305 PF01118 Semialdehyde dehydrogenase, NAD binding domain TRQ2_RS07325 PF00534 Glycosyl transferases group 1 TRQ2_RS07325 PF13439 Glycosyltransferase Family 4 TRQ2_RS07330 PF03537 Glycoside-hydrolase family GH114 TRQ2_RS07355 PF13439 Glycosyltransferase Family 4 TRQ2_RS07355 PF00534 Glycosyl transferases group 1 TRQ2_RS07360 PF01061 ABC-2 type transporter TRQ2_RS07365 PF13732 Domain of unknown function (DUF4162) TRQ2_RS07365 PF00005 ABC transporter TRQ2_RS07370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TRQ2_RS07370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TRQ2_RS07375 PF00266 Aminotransferase class-V TRQ2_RS07380 PF01765 Ribosome recycling factor TRQ2_RS07385 PF01255 Putative undecaprenyl diphosphate synthase TRQ2_RS07395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TRQ2_RS07395 PF01411 tRNA synthetases class II (A) TRQ2_RS07395 PF02272 DHHA1 domain TRQ2_RS07405 PF01430 Hsp33 protein TRQ2_RS07410 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TRQ2_RS07420 PF00004 ATPase family associated with various cellular activities (AAA) TRQ2_RS07420 PF10431 C-terminal, D2-small domain, of ClpB protein TRQ2_RS07420 PF02861 Clp amino terminal domain, pathogenicity island component TRQ2_RS07420 PF17871 AAA lid domain TRQ2_RS07420 PF07724 AAA domain (Cdc48 subfamily) TRQ2_RS07450 PF01121 Dephospho-CoA kinase TRQ2_RS07460 PF00342 Phosphoglucose isomerase TRQ2_RS07465 PF00156 Phosphoribosyl transferase domain TRQ2_RS07470 PF00288 GHMP kinases N terminal domain TRQ2_RS07485 PF04452 RNA methyltransferase TRQ2_RS07490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TRQ2_RS07490 PF02403 Seryl-tRNA synthetase N-terminal domain TRQ2_RS07495 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS07500 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS07505 PF08402 TOBE domain TRQ2_RS07505 PF00005 ABC transporter TRQ2_RS07510 PF13416 Bacterial extracellular solute-binding protein TRQ2_RS07520 PF00300 Histidine phosphatase superfamily (branch 1) TRQ2_RS07530 PF01592 NifU-like N terminal domain TRQ2_RS07535 PF00266 Aminotransferase class-V TRQ2_RS07540 PF01458 Uncharacterized protein family (UPF0051) TRQ2_RS07545 PF01458 Uncharacterized protein family (UPF0051) TRQ2_RS07550 PF00005 ABC transporter TRQ2_RS07565 PF02049 Flagellar hook-basal body complex protein FliE TRQ2_RS07570 PF00460 Flagella basal body rod protein TRQ2_RS07570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TRQ2_RS07575 PF00460 Flagella basal body rod protein TRQ2_RS07580 PF03462 PCRF domain TRQ2_RS07580 PF00472 RF-1 domain TRQ2_RS07585 PF00437 Type II/IV secretion system protein TRQ2_RS07590 PF06827 Zinc finger found in FPG and IleRS TRQ2_RS07590 PF00133 tRNA synthetases class I (I, L, M and V) TRQ2_RS07590 PF08264 Anticodon-binding domain of tRNA TRQ2_RS07595 PF00486 Transcriptional regulatory protein, C terminal TRQ2_RS07595 PF00072 Response regulator receiver domain TRQ2_RS07600 PF00989 PAS fold TRQ2_RS07600 PF00512 His Kinase A (phospho-acceptor) domain TRQ2_RS07600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRQ2_RS07610 PF01139 tRNA-splicing ligase RtcB TRQ2_RS07625 PF00478 IMP dehydrogenase / GMP reductase domain TRQ2_RS07625 PF00571 CBS domain TRQ2_RS07640 PF00749 tRNA synthetases class I (E and Q), catalytic domain TRQ2_RS07645 PF12146 Serine aminopeptidase, S33 TRQ2_RS07650 PF01594 AI-2E family transporter TRQ2_RS07660 PF00571 CBS domain TRQ2_RS07660 PF00478 IMP dehydrogenase / GMP reductase domain TRQ2_RS07665 PF05193 Peptidase M16 inactive domain TRQ2_RS07665 PF00675 Insulinase (Peptidase family M16) TRQ2_RS07670 PF00013 KH domain TRQ2_RS07670 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TRQ2_RS07670 PF00575 S1 RNA binding domain TRQ2_RS07670 PF01138 3' exoribonuclease family, domain 1 TRQ2_RS07670 PF03725 3' exoribonuclease family, domain 2 TRQ2_RS07675 PF00312 Ribosomal protein S15 TRQ2_RS07700 PF00355 Rieske [2Fe-2S] domain TRQ2_RS07755 PF00005 ABC transporter TRQ2_RS07755 PF00664 ABC transporter transmembrane region TRQ2_RS07760 PF00005 ABC transporter TRQ2_RS07770 PF04055 Radical SAM superfamily TRQ2_RS07770 PF06463 Molybdenum Cofactor Synthesis C TRQ2_RS07775 PF13186 Iron-sulfur cluster-binding domain TRQ2_RS07775 PF04055 Radical SAM superfamily TRQ2_RS07790 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system TRQ2_RS07800 PF00005 ABC transporter TRQ2_RS07800 PF00664 ABC transporter transmembrane region TRQ2_RS07805 PF00005 ABC transporter TRQ2_RS07805 PF00664 ABC transporter transmembrane region TRQ2_RS07815 PF13176 Tetratricopeptide repeat TRQ2_RS07815 PF00931 NB-ARC domain TRQ2_RS07820 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system TRQ2_RS07830 PF00664 ABC transporter transmembrane region TRQ2_RS07830 PF00005 ABC transporter TRQ2_RS07855 PF00005 ABC transporter TRQ2_RS07870 PF00248 Aldo/keto reductase family TRQ2_RS07880 PF00753 Metallo-beta-lactamase superfamily TRQ2_RS07880 PF16123 Hydroxyacylglutathione hydrolase C-terminus TRQ2_RS07890 PF01209 ubiE/COQ5 methyltransferase family TRQ2_RS07895 PF10609 NUBPL iron-transfer P-loop NTPase TRQ2_RS07900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TRQ2_RS07915 PF01926 50S ribosome-binding GTPase TRQ2_RS07915 PF01018 GTP1/OBG TRQ2_RS07915 PF04055 Radical SAM superfamily TRQ2_RS07920 PF07883 Cupin domain TRQ2_RS07925 PF01717 Cobalamin-independent synthase, Catalytic domain TRQ2_RS07925 PF08267 Cobalamin-independent synthase, N-terminal domain TRQ2_RS07935 PF00355 Rieske [2Fe-2S] domain TRQ2_RS07940 PF02660 Glycerol-3-phosphate acyltransferase TRQ2_RS07955 PF02056 Family 4 glycosyl hydrolase TRQ2_RS07955 PF11975 Family 4 glycosyl hydrolase C-terminal domain TRQ2_RS07970 PF01713 Smr domain TRQ2_RS07970 PF00488 MutS domain V TRQ2_RS07975 PF02491 SHS2 domain inserted in FTSA TRQ2_RS07980 PF17912 MalK OB fold domain TRQ2_RS07980 PF03459 TOBE domain TRQ2_RS07980 PF00005 ABC transporter TRQ2_RS07995 PF02637 GatB domain TRQ2_RS07995 PF02934 GatB/GatE catalytic domain TRQ2_RS08000 PF01425 Amidase TRQ2_RS08005 PF07963 Prokaryotic N-terminal methylation motif TRQ2_RS08010 PF00331 Glycosyl hydrolase family 10 TRQ2_RS08010 PF06452 Carbohydrate family 9 binding domain-like TRQ2_RS08010 PF02018 Carbohydrate binding domain TRQ2_RS08015 PF01053 Cys/Met metabolism PLP-dependent enzyme TRQ2_RS08020 PF04055 Radical SAM superfamily TRQ2_RS08020 PF06968 Biotin and Thiamin Synthesis associated domain TRQ2_RS08045 PF12849 PBP superfamily domain TRQ2_RS08055 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08060 PF00005 ABC transporter TRQ2_RS08065 PF01895 PhoU domain TRQ2_RS08070 PF00072 Response regulator receiver domain TRQ2_RS08070 PF00486 Transcriptional regulatory protein, C terminal TRQ2_RS08075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRQ2_RS08075 PF00512 His Kinase A (phospho-acceptor) domain TRQ2_RS08085 PF00664 ABC transporter transmembrane region TRQ2_RS08085 PF00005 ABC transporter TRQ2_RS08090 PF00155 Aminotransferase class I and II TRQ2_RS08095 PF13419 Haloacid dehalogenase-like hydrolase TRQ2_RS08100 PF00795 Carbon-nitrogen hydrolase TRQ2_RS08100 PF02540 NAD synthase TRQ2_RS08110 PF00586 AIR synthase related protein, N-terminal domain TRQ2_RS08110 PF02769 AIR synthase related protein, C-terminal domain TRQ2_RS08115 PF02844 Phosphoribosylglycinamide synthetase, N domain TRQ2_RS08115 PF02843 Phosphoribosylglycinamide synthetase, C domain TRQ2_RS08115 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TRQ2_RS08120 PF01808 AICARFT/IMPCHase bienzyme TRQ2_RS08120 PF02142 MGS-like domain TRQ2_RS08125 PF00551 Formyl transferase TRQ2_RS08130 PF00156 Phosphoribosyl transferase domain TRQ2_RS08135 PF16904 Phosphoribosylformylglycinamidine synthase II C-terminus TRQ2_RS08135 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TRQ2_RS08135 PF02769 AIR synthase related protein, C-terminal domain TRQ2_RS08135 PF00586 AIR synthase related protein, N-terminal domain TRQ2_RS08145 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase TRQ2_RS08150 PF01259 SAICAR synthetase TRQ2_RS08165 PF06071 Protein of unknown function (DUF933) TRQ2_RS08165 PF01926 50S ribosome-binding GTPase TRQ2_RS08175 PF13361 UvrD-like helicase C-terminal domain TRQ2_RS08175 PF00580 UvrD/REP helicase N-terminal domain TRQ2_RS08190 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08195 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08200 PF08402 TOBE domain TRQ2_RS08200 PF00005 ABC transporter TRQ2_RS08205 PF07748 Glycosyl hydrolases family 38 C-terminal domain TRQ2_RS08205 PF09261 Alpha mannosidase middle domain TRQ2_RS08205 PF01074 Glycosyl hydrolases family 38 N-terminal domain TRQ2_RS08210 PF00534 Glycosyl transferases group 1 TRQ2_RS08215 PF00535 Glycosyl transferase family 2 TRQ2_RS08220 PF01418 Helix-turn-helix domain, rpiR family TRQ2_RS08220 PF01380 SIS domain TRQ2_RS08230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TRQ2_RS08235 PF04041 beta-1,4-mannooligosaccharide phosphorylase TRQ2_RS08240 PF01325 Iron dependent repressor, N-terminal DNA binding domain TRQ2_RS08240 PF00480 ROK family TRQ2_RS08245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TRQ2_RS08250 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08255 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08255 PF12911 N-terminal TM domain of oligopeptide transport permease C TRQ2_RS08260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS08260 PF00005 ABC transporter TRQ2_RS08265 PF00005 ABC transporter TRQ2_RS08265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS08270 PF00356 Bacterial regulatory proteins, lacI family TRQ2_RS08275 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TRQ2_RS08275 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRQ2_RS08280 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TRQ2_RS08285 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TRQ2_RS08285 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TRQ2_RS08290 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TRQ2_RS08300 PF00361 Proton-conducting membrane transporter TRQ2_RS08305 PF00361 Proton-conducting membrane transporter TRQ2_RS08310 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TRQ2_RS08315 PF00361 Proton-conducting membrane transporter TRQ2_RS08315 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter TRQ2_RS08315 PF13244 Domain of unknown function (DUF4040) TRQ2_RS08315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TRQ2_RS08330 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) TRQ2_RS08335 PF01899 Na+/H+ ion antiporter subunit TRQ2_RS08340 PF01547 Bacterial extracellular solute-binding protein TRQ2_RS08345 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08345 PF14785 Maltose transport system permease protein MalF P2 domain TRQ2_RS08350 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08355 PF07745 Glycosyl hydrolase family 53 TRQ2_RS08360 PF00356 Bacterial regulatory proteins, lacI family TRQ2_RS08370 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08375 PF12911 N-terminal TM domain of oligopeptide transport permease C TRQ2_RS08375 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08380 PF00005 ABC transporter TRQ2_RS08380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS08385 PF08532 Beta-galactosidase trimerisation domain TRQ2_RS08385 PF02449 Beta-galactosidase TRQ2_RS08385 PF08533 Beta-galactosidase C-terminal domain TRQ2_RS08390 PF00005 ABC transporter TRQ2_RS08390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS08395 PF02837 Glycosyl hydrolases family 2, sugar binding domain TRQ2_RS08395 PF02929 Beta galactosidase small chain TRQ2_RS08395 PF16353 Domain of unknown function(DUF4981) TRQ2_RS08395 PF00703 Glycosyl hydrolases family 2 TRQ2_RS08395 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TRQ2_RS08405 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain TRQ2_RS08405 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain TRQ2_RS08410 PF10509 Galactokinase galactose-binding signature TRQ2_RS08410 PF08544 GHMP kinases C terminal TRQ2_RS08410 PF00288 GHMP kinases N terminal domain TRQ2_RS08415 PF07282 Putative transposase DNA-binding domain TRQ2_RS08415 PF12323 Helix-turn-helix domain TRQ2_RS08415 PF01385 Probable transposase TRQ2_RS08420 PF17155 Gammaproteobacterial periplasmic sensor domain TRQ2_RS08420 PF00990 Diguanylate cyclase, GGDEF domain TRQ2_RS08435 PF01594 AI-2E family transporter TRQ2_RS08445 PF02142 MGS-like domain TRQ2_RS08450 PF03707 Bacterial signalling protein N terminal repeat TRQ2_RS08450 PF00990 Diguanylate cyclase, GGDEF domain TRQ2_RS08450 PF00563 EAL domain TRQ2_RS08455 PF00248 Aldo/keto reductase family TRQ2_RS08460 PF02463 RecF/RecN/SMC N terminal domain TRQ2_RS08460 PF06470 SMC proteins Flexible Hinge Domain TRQ2_RS08465 PF00293 NUDIX domain TRQ2_RS08475 PF02561 Flagellar protein FliS TRQ2_RS08480 PF00583 Acetyltransferase (GNAT) family TRQ2_RS08485 PF13419 Haloacid dehalogenase-like hydrolase TRQ2_RS08490 PF03063 Prismane/CO dehydrogenase family TRQ2_RS08500 PF00072 Response regulator receiver domain TRQ2_RS08510 PF11897 Protein of unknown function (DUF3417) TRQ2_RS08510 PF00343 Carbohydrate phosphorylase TRQ2_RS08520 PF06969 HemN C-terminal domain TRQ2_RS08520 PF04055 Radical SAM superfamily TRQ2_RS08525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TRQ2_RS08535 PF00990 Diguanylate cyclase, GGDEF domain TRQ2_RS08535 PF17155 Gammaproteobacterial periplasmic sensor domain TRQ2_RS08540 PF12706 Beta-lactamase superfamily domain TRQ2_RS08545 PF01769 Divalent cation transporter TRQ2_RS08545 PF00571 CBS domain TRQ2_RS08545 PF03448 MgtE intracellular N domain TRQ2_RS08565 PF00117 Glutamine amidotransferase class-I TRQ2_RS08575 PF04024 PspC domain TRQ2_RS08580 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain TRQ2_RS08580 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain TRQ2_RS08585 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TRQ2_RS08590 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08590 PF12911 N-terminal TM domain of oligopeptide transport permease C TRQ2_RS08595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS08595 PF00005 ABC transporter TRQ2_RS08600 PF00005 ABC transporter TRQ2_RS08600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRQ2_RS08605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TRQ2_RS08610 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08615 PF00180 Isocitrate/isopropylmalate dehydrogenase TRQ2_RS08625 PF02683 Cytochrome C biogenesis protein transmembrane region TRQ2_RS08630 PF00478 IMP dehydrogenase / GMP reductase domain TRQ2_RS08630 PF00571 CBS domain TRQ2_RS08635 PF00005 ABC transporter TRQ2_RS08640 PF00005 ABC transporter TRQ2_RS08640 PF12399 Branched-chain amino acid ATP-binding cassette transporter TRQ2_RS08645 PF11862 Domain of unknown function (DUF3382) TRQ2_RS08645 PF02653 Branched-chain amino acid transport system / permease component TRQ2_RS08650 PF02653 Branched-chain amino acid transport system / permease component TRQ2_RS08670 PF17863 AAA lid domain TRQ2_RS08670 PF07726 ATPase family associated with various cellular activities (AAA) TRQ2_RS08675 PF00155 Aminotransferase class I and II TRQ2_RS08680 PF01515 Phosphate acetyl/butaryl transferase TRQ2_RS08685 PF01048 Phosphorylase superfamily TRQ2_RS08690 PF00210 Ferritin-like domain TRQ2_RS08740 PF07195 Flagellar hook-associated protein 2 C-terminus TRQ2_RS08740 PF02465 Flagellar hook-associated protein 2 N-terminus TRQ2_RS08740 PF07196 Flagellin hook IN motif TRQ2_RS08745 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08750 PF00528 Binding-protein-dependent transport system inner membrane component TRQ2_RS08755 PF13416 Bacterial extracellular solute-binding protein TRQ2_RS08830 PF00361 Proton-conducting membrane transporter TRQ2_RS08845 PF14622 Ribonuclease-III-like TRQ2_RS08845 PF00035 Double-stranded RNA binding motif TRQ2_RS08850 PF12850 Calcineurin-like phosphoesterase superfamily domain TRQ2_RS08860 PF02223 Thymidylate kinase TRQ2_RS08870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TRQ2_RS08870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TRQ2_RS08875 PF00709 Adenylosuccinate synthetase TRQ2_RS08880 PF00206 Lyase TRQ2_RS08880 PF10397 Adenylosuccinate lyase C-terminus TRQ2_RS08885 PF05958 tRNA (Uracil-5-)-methyltransferase TRQ2_RS08890 PF03485 Arginyl tRNA synthetase N terminal domain TRQ2_RS08890 PF00750 tRNA synthetases class I (R) TRQ2_RS08890 PF05746 DALR anticodon binding domain TRQ2_RS08905 PF03129 Anticodon binding domain TRQ2_RS08905 PF13393 Histidyl-tRNA synthetase TRQ2_RS08910 PF02386 Cation transport protein TRQ2_RS08920 PF02080 TrkA-C domain TRQ2_RS08920 PF02254 TrkA-N domain TRQ2_RS08935 PF01588 Putative tRNA binding domain TRQ2_RS08935 PF09334 tRNA synthetases class I (M) TRQ2_RS08935 PF08264 Anticodon-binding domain of tRNA TRQ2_RS08940 PF00521 DNA gyrase/topoisomerase IV, subunit A TRQ2_RS08940 PF03989 DNA gyrase C-terminal domain, beta-propeller TRQ2_RS08945 PF01951 Archease protein family (MTH1598/TM1083) TRQ2_RS08950 PF01726 LexA DNA binding domain TRQ2_RS08950 PF00717 Peptidase S24-like TRQ2_RS08955 PF01740 STAS domain TRQ2_RS08960 PF02502 Ribose/Galactose Isomerase TRQ2_RS08975 PF02569 Pantoate-beta-alanine ligase TRQ2_RS08985 PF00958 GMP synthase C terminal domain TRQ2_RS08985 PF00117 Glutamine amidotransferase class-I TRQ2_RS08985 PF02540 NAD synthase TRQ2_RS08995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TRQ2_RS08995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TRQ2_RS09020 PF04232 Stage V sporulation protein S (SpoVS) TRQ2_RS09030 PF07885 Ion channel TRQ2_RS09030 PF02254 TrkA-N domain TRQ2_RS09035 PF03091 CutA1 divalent ion tolerance protein TRQ2_RS09045 PF00005 ABC transporter TRQ2_RS09055 PF10531 SLBB domain TRQ2_RS09065 PF05343 M42 glutamyl aminopeptidase TRQ2_RS09070 PF05343 M42 glutamyl aminopeptidase TRQ2_RS09075 PF05343 M42 glutamyl aminopeptidase TRQ2_RS09080 PF03775 Septum formation inhibitor MinC, C-terminal domain TRQ2_RS09090 PF03600 Citrate transporter TRQ2_RS09095 PF07282 Putative transposase DNA-binding domain TRQ2_RS09095 PF01385 Probable transposase TRQ2_RS09095 PF12323 Helix-turn-helix domain TRQ2_RS09100 PF13393 Histidyl-tRNA synthetase TRQ2_RS09105 PF01634 ATP phosphoribosyltransferase TRQ2_RS09110 PF00815 Histidinol dehydrogenase TRQ2_RS09115 PF00155 Aminotransferase class I and II TRQ2_RS09120 PF00475 Imidazoleglycerol-phosphate dehydratase TRQ2_RS09125 PF00117 Glutamine amidotransferase class-I TRQ2_RS09130 PF00977 Histidine biosynthesis protein TRQ2_RS09135 PF00977 Histidine biosynthesis protein TRQ2_RS09140 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TRQ2_RS09140 PF01502 Phosphoribosyl-AMP cyclohydrolase TRQ2_RS09145 PF02350 UDP-N-acetylglucosamine 2-epimerase TRQ2_RS09150 PF00483 Nucleotidyl transferase TRQ2_RS09150 PF01050 Mannose-6-phosphate isomerase TRQ2_RS09160 PF00462 Glutaredoxin TRQ2_RS09175 PF13732 Domain of unknown function (DUF4162) TRQ2_RS09175 PF00005 ABC transporter TRQ2_RS09200 PF12146 Serine aminopeptidase, S33 TRQ2_RS09205 PF07690 Major Facilitator Superfamily TRQ2_RS09230 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TRQ2_RS09230 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TRQ2_RS09260 PF00248 Aldo/keto reductase family TRQ2_RS09270 PF00248 Aldo/keto reductase family TRQ2_RS09275 PF12833 Helix-turn-helix domain TRQ2_RS09275 PF06719 AraC-type transcriptional regulator N-terminus TRQ2_RS09310 PF00271 Helicase conserved C-terminal domain TRQ2_RS09310 PF00176 SNF2 family N-terminal domain TRQ2_RS09330 PF06672 Protein of unknown function (DUF1175) TRQ2_RS09340 PF00207 Alpha-2-macroglobulin family TRQ2_RS09340 PF07703 Alpha-2-macroglobulin bait region domain TRQ2_RS09340 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain TRQ2_RS09340 PF01835 MG2 domain TRQ2_RS09340 PF07678 A-macroglobulin TED domain TRQ2_RS09345 PF01206 Sulfurtransferase TusA TRQ2_RS09370 PF01206 Sulfurtransferase TusA TRQ2_RS09380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRQ2_RS09385 PF00990 Diguanylate cyclase, GGDEF domain TRQ2_RS09400 PF02899 Phage integrase, N-terminal SAM-like domain TRQ2_RS09400 PF00589 Phage integrase family TRQ2_RS09405 PF02540 NAD synthase TRQ2_RS09410 PF00731 AIR carboxylase TRQ2_RS09415 PF01969 Protein of unknown function DUF111 TRQ2_RS09425 PF01713 Smr domain TRQ2_RS09425 PF00488 MutS domain V TRQ2_RS09430 PF00488 MutS domain V TRQ2_RS09430 PF01713 Smr domain TRQ2_RS09440 PF04011 LemA family TRQ2_RS09470 PF00120 Glutamine synthetase, catalytic domain TRQ2_RS09470 PF03951 Glutamine synthetase, beta-Grasp domain TRQ2_RS09485 PF01479 S4 domain TRQ2_RS09485 PF00849 RNA pseudouridylate synthase TRQ2_RS09490 PF02261 Aspartate decarboxylase TRQ2_RS09505 PF01979 Amidohydrolase family TRQ2_RS09510 PF00571 CBS domain TRQ2_RS09510 PF01769 Divalent cation transporter TRQ2_RS09510 PF03448 MgtE intracellular N domain TRQ2_RS09515 PF03600 Citrate transporter TRQ2_RS09535 PF00004 ATPase family associated with various cellular activities (AAA) TRQ2_RS09535 PF05362 Lon protease (S16) C-terminal proteolytic domain TRQ2_RS09535 PF02190 ATP-dependent protease La (LON) substrate-binding domain TRQ2_RS09540 PF13203 Putative metallopeptidase domain TRQ2_RS09540 PF09967 VWA-like domain (DUF2201) TRQ2_RS09545 PF16236 Domain of unknown function (DUF4895) TRQ2_RS09570 PF01022 Bacterial regulatory protein, arsR family