locus-tag class description EBI04_RS00005 PF01895 PhoU domain EBI04_RS00010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS00010 PF07689 KaiB domain EBI04_RS00015 PF00072 Response regulator receiver domain EBI04_RS00015 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS00030 PF03949 Malic enzyme, NAD binding domain EBI04_RS00030 PF00390 Malic enzyme, N-terminal domain EBI04_RS00045 PF01571 Aminomethyltransferase folate-binding domain EBI04_RS00045 PF08669 Glycine cleavage T-protein C-terminal barrel domain EBI04_RS00050 PF01597 Glycine cleavage H-protein EBI04_RS00055 PF02347 Glycine cleavage system P-protein EBI04_RS00060 PF02347 Glycine cleavage system P-protein EBI04_RS00075 PF13247 4Fe-4S dicluster domain EBI04_RS00080 PF10518 TAT (twin-arginine translocation) pathway signal sequence EBI04_RS00080 PF00384 Molybdopterin oxidoreductase EBI04_RS00080 PF01568 Molydopterin dinucleotide binding domain EBI04_RS00080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EBI04_RS00090 PF00072 Response regulator receiver domain EBI04_RS00090 PF00196 Bacterial regulatory proteins, luxR family EBI04_RS00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS00095 PF05384 Sensor protein DegS EBI04_RS00095 PF07730 Histidine kinase EBI04_RS00100 PF06574 FAD synthetase EBI04_RS00100 PF01687 Riboflavin kinase EBI04_RS00105 PF00293 NUDIX domain EBI04_RS00120 PF04539 Sigma-70 region 3 EBI04_RS00120 PF04545 Sigma-70, region 4 EBI04_RS00120 PF04542 Sigma-70 region 2 EBI04_RS00120 PF00140 Sigma-70 factor, region 1.2 EBI04_RS00130 PF00696 Amino acid kinase family EBI04_RS00130 PF01842 ACT domain EBI04_RS00130 PF13840 ACT domain EBI04_RS00135 PF00156 Phosphoribosyl transferase domain EBI04_RS00140 PF00056 lactate/malate dehydrogenase, NAD binding domain EBI04_RS00140 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EBI04_RS00145 PF08275 DNA primase catalytic core, N-terminal domain EBI04_RS00145 PF13662 Toprim domain EBI04_RS00145 PF01807 CHC2 zinc finger EBI04_RS00150 PF00072 Response regulator receiver domain EBI04_RS00150 PF00211 Adenylate and Guanylate cyclase catalytic domain EBI04_RS00165 PF00583 Acetyltransferase (GNAT) family EBI04_RS00175 PF04079 Segregation and condensation complex subunit ScpB EBI04_RS00180 PF01300 Telomere recombination EBI04_RS00185 PF00482 Type II secretion system (T2SS), protein F EBI04_RS00200 PF01565 FAD binding domain EBI04_RS00200 PF02913 FAD linked oxidases, C-terminal domain EBI04_RS00210 PF02153 Prephenate dehydrogenase EBI04_RS00210 PF01842 ACT domain EBI04_RS00215 PF00793 DAHP synthetase I family EBI04_RS00215 PF18152 DAHP synthase ferredoxin-like domain EBI04_RS00220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBI04_RS00225 PF04264 YceI-like domain EBI04_RS00230 PF02621 Menaquinone biosynthesis EBI04_RS00235 PF04055 Radical SAM superfamily EBI04_RS00250 PF00356 Bacterial regulatory proteins, lacI family EBI04_RS00255 PF02660 Glycerol-3-phosphate acyltransferase EBI04_RS00260 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBI04_RS00270 PF00551 Formyl transferase EBI04_RS00275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EBI04_RS00275 PF02843 Phosphoribosylglycinamide synthetase, C domain EBI04_RS00275 PF02844 Phosphoribosylglycinamide synthetase, N domain EBI04_RS00285 PF00072 Response regulator receiver domain EBI04_RS00285 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS00290 PF00672 HAMP domain EBI04_RS00290 PF00512 His Kinase A (phospho-acceptor) domain EBI04_RS00295 PF00571 CBS domain EBI04_RS00295 PF01743 Poly A polymerase head domain EBI04_RS00305 PF00474 Sodium:solute symporter family EBI04_RS00315 PF13193 AMP-binding enzyme C-terminal domain EBI04_RS00315 PF00501 AMP-binding enzyme EBI04_RS00315 PF16177 Acetyl-coenzyme A synthetase N-terminus EBI04_RS00320 PF16177 Acetyl-coenzyme A synthetase N-terminus EBI04_RS00320 PF00501 AMP-binding enzyme EBI04_RS00320 PF13193 AMP-binding enzyme C-terminal domain EBI04_RS00325 PF00501 AMP-binding enzyme EBI04_RS00325 PF13193 AMP-binding enzyme C-terminal domain EBI04_RS00325 PF16177 Acetyl-coenzyme A synthetase N-terminus EBI04_RS00335 PF02310 B12 binding domain EBI04_RS00335 PF01642 Methylmalonyl-CoA mutase EBI04_RS00340 PF01638 HxlR-like helix-turn-helix EBI04_RS00345 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EBI04_RS00350 PF03776 Septum formation topological specificity factor MinE EBI04_RS00355 PF01098 Cell cycle protein EBI04_RS00360 PF08402 TOBE domain EBI04_RS00360 PF00005 ABC transporter EBI04_RS00365 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS00370 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS00375 PF13416 Bacterial extracellular solute-binding protein EBI04_RS00380 PF00034 Cytochrome c EBI04_RS00385 PF00920 Dehydratase family EBI04_RS00405 PF00180 Isocitrate/isopropylmalate dehydrogenase EBI04_RS00410 PF00694 Aconitase C-terminal domain EBI04_RS00415 PF00330 Aconitase family (aconitate hydratase) EBI04_RS00430 PF00579 tRNA synthetases class I (W and Y) EBI04_RS00450 PF00535 Glycosyl transferase family 2 EBI04_RS00460 PF16363 GDP-mannose 4,6 dehydratase EBI04_RS00470 PF04321 RmlD substrate binding domain EBI04_RS00475 PF00483 Nucleotidyl transferase EBI04_RS00505 PF07963 Prokaryotic N-terminal methylation motif EBI04_RS00515 PF07963 Prokaryotic N-terminal methylation motif EBI04_RS00520 PF07963 Prokaryotic N-terminal methylation motif EBI04_RS00525 PF07963 Prokaryotic N-terminal methylation motif EBI04_RS00525 PF12019 Type II transport protein GspH EBI04_RS00530 PF12019 Type II transport protein GspH EBI04_RS00530 PF07963 Prokaryotic N-terminal methylation motif EBI04_RS00535 PF02803 Thiolase, C-terminal domain EBI04_RS00535 PF00108 Thiolase, N-terminal domain EBI04_RS00550 PF01048 Phosphorylase superfamily EBI04_RS00555 PF01168 Alanine racemase, N-terminal domain EBI04_RS00570 PF01926 50S ribosome-binding GTPase EBI04_RS00570 PF16360 GTP-binding GTPase Middle Region EBI04_RS00570 PF13167 GTP-binding GTPase N-terminal EBI04_RS00575 PF00708 Acylphosphatase EBI04_RS00585 PF00107 Zinc-binding dehydrogenase EBI04_RS00585 PF08240 Alcohol dehydrogenase GroES-like domain EBI04_RS00590 PF07995 Glucose / Sorbosone dehydrogenase EBI04_RS00595 PF01008 Initiation factor 2 subunit family EBI04_RS00630 PF13476 AAA domain EBI04_RS00655 PF00675 Insulinase (Peptidase family M16) EBI04_RS00655 PF05193 Peptidase M16 inactive domain EBI04_RS00660 PF00675 Insulinase (Peptidase family M16) EBI04_RS00660 PF05193 Peptidase M16 inactive domain EBI04_RS00665 PF00892 EamA-like transporter family EBI04_RS00670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBI04_RS00670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBI04_RS00675 PF02446 4-alpha-glucanotransferase EBI04_RS00680 PF00549 CoA-ligase EBI04_RS00680 PF02629 CoA binding domain EBI04_RS00685 PF08442 ATP-grasp domain EBI04_RS00685 PF00549 CoA-ligase EBI04_RS00695 PF01938 TRAM domain EBI04_RS00700 PF18073 Rubredoxin metal binding domain EBI04_RS00705 PF07724 AAA domain (Cdc48 subfamily) EBI04_RS00705 PF10431 C-terminal, D2-small domain, of ClpB protein EBI04_RS00705 PF17871 AAA lid domain EBI04_RS00705 PF02861 Clp amino terminal domain, pathogenicity island component EBI04_RS00705 PF00004 ATPase family associated with various cellular activities (AAA) EBI04_RS00725 PF02774 Semialdehyde dehydrogenase, dimerisation domain EBI04_RS00725 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBI04_RS00730 PF01728 FtsJ-like methyltransferase EBI04_RS00730 PF01479 S4 domain EBI04_RS00745 PF02637 GatB domain EBI04_RS00745 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBI04_RS00745 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EBI04_RS00750 PF00378 Enoyl-CoA hydratase/isomerase EBI04_RS00755 PF05198 Translation initiation factor IF-3, N-terminal domain EBI04_RS00755 PF00707 Translation initiation factor IF-3, C-terminal domain EBI04_RS00760 PF01632 Ribosomal protein L35 EBI04_RS00765 PF00453 Ribosomal protein L20 EBI04_RS00775 PF02660 Glycerol-3-phosphate acyltransferase EBI04_RS00780 PF01048 Phosphorylase superfamily EBI04_RS00785 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EBI04_RS00785 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EBI04_RS00790 PF00206 Lyase EBI04_RS00790 PF10415 Fumarase C C-terminus EBI04_RS00795 PF03741 Integral membrane protein TerC family EBI04_RS00810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EBI04_RS00810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBI04_RS00810 PF00205 Thiamine pyrophosphate enzyme, central domain EBI04_RS00815 PF01842 ACT domain EBI04_RS00815 PF10369 Small subunit of acetolactate synthase EBI04_RS00820 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EBI04_RS00820 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EBI04_RS00825 PF00682 HMGL-like EBI04_RS00825 PF08502 LeuA allosteric (dimerisation) domain EBI04_RS00830 PF00682 HMGL-like EBI04_RS00830 PF08502 LeuA allosteric (dimerisation) domain EBI04_RS00845 PF00005 ABC transporter EBI04_RS00885 PF00815 Histidinol dehydrogenase EBI04_RS00895 PF00082 Subtilase family EBI04_RS00900 PF03816 Cell envelope-related transcriptional attenuator domain EBI04_RS00915 PF03023 Lipid II flippase MurJ EBI04_RS00925 PF13193 AMP-binding enzyme C-terminal domain EBI04_RS00925 PF16177 Acetyl-coenzyme A synthetase N-terminus EBI04_RS00925 PF00501 AMP-binding enzyme EBI04_RS00930 PF07714 Protein tyrosine kinase EBI04_RS00955 PF17785 PUA-like domain EBI04_RS00955 PF10672 S-adenosylmethionine-dependent methyltransferase EBI04_RS00965 PF18670 V-type ATPase subunit I, N-terminal domain EBI04_RS00965 PF01496 V-type ATPase 116kDa subunit family EBI04_RS00975 PF01991 ATP synthase (E/31 kDa) subunit EBI04_RS00980 PF01992 ATP synthase (C/AC39) subunit EBI04_RS00985 PF01990 ATP synthase (F/14-kDa) subunit EBI04_RS00990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBI04_RS00990 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBI04_RS00990 PF16886 ATPsynthase alpha/beta subunit N-term extension EBI04_RS00995 PF02874 ATP synthase alpha/beta family, beta-barrel domain EBI04_RS00995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBI04_RS01000 PF01813 ATP synthase subunit D EBI04_RS01005 PF00330 Aconitase family (aconitate hydratase) EBI04_RS01005 PF00694 Aconitase C-terminal domain EBI04_RS01015 PF00873 AcrB/AcrD/AcrF family EBI04_RS01035 PF01047 MarR family EBI04_RS01040 PF00571 CBS domain EBI04_RS01040 PF03471 Transporter associated domain EBI04_RS01040 PF01595 Cyclin M transmembrane N-terminal domain EBI04_RS01045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EBI04_RS01055 PF00701 Dihydrodipicolinate synthetase family EBI04_RS01065 PF03315 Serine dehydratase beta chain EBI04_RS01065 PF01842 ACT domain EBI04_RS01070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS01070 PF00582 Universal stress protein family EBI04_RS01070 PF13493 Domain of unknown function (DUF4118) EBI04_RS01070 PF00512 His Kinase A (phospho-acceptor) domain EBI04_RS01070 PF02702 Osmosensitive K+ channel His kinase sensor domain EBI04_RS01075 PF03144 Elongation factor Tu domain 2 EBI04_RS01075 PF06421 GTP-binding protein LepA C-terminus EBI04_RS01075 PF00679 Elongation factor G C-terminus EBI04_RS01075 PF00009 Elongation factor Tu GTP binding domain EBI04_RS01085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBI04_RS01085 PF02770 Acyl-CoA dehydrogenase, middle domain EBI04_RS01085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBI04_RS01090 PF00108 Thiolase, N-terminal domain EBI04_RS01090 PF02803 Thiolase, C-terminal domain EBI04_RS01095 PF00106 short chain dehydrogenase EBI04_RS01100 PF01385 Probable transposase EBI04_RS01100 PF12323 Helix-turn-helix domain EBI04_RS01100 PF07282 Putative transposase DNA-binding domain EBI04_RS01105 PF02515 CoA-transferase family III EBI04_RS01115 PF00005 ABC transporter EBI04_RS01120 PF00005 ABC transporter EBI04_RS01120 PF12399 Branched-chain amino acid ATP-binding cassette transporter EBI04_RS01130 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS01140 PF08240 Alcohol dehydrogenase GroES-like domain EBI04_RS01140 PF00107 Zinc-binding dehydrogenase EBI04_RS01155 PF00005 ABC transporter EBI04_RS01160 PF00005 ABC transporter EBI04_RS01160 PF12399 Branched-chain amino acid ATP-binding cassette transporter EBI04_RS01165 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS01170 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS01175 PF13458 Periplasmic binding protein EBI04_RS01180 PF01575 MaoC like domain EBI04_RS01185 PF00561 alpha/beta hydrolase fold EBI04_RS01190 PF00561 alpha/beta hydrolase fold EBI04_RS01195 PF13193 AMP-binding enzyme C-terminal domain EBI04_RS01195 PF00501 AMP-binding enzyme EBI04_RS01200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBI04_RS01200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBI04_RS01215 PF00732 GMC oxidoreductase EBI04_RS01215 PF05199 GMC oxidoreductase EBI04_RS01245 PF00196 Bacterial regulatory proteins, luxR family EBI04_RS01245 PF17874 MalT-like TPR region EBI04_RS01255 PF02355 Protein export membrane protein EBI04_RS01255 PF07549 SecD/SecF GG Motif EBI04_RS01265 PF11987 Translation-initiation factor 2 EBI04_RS01265 PF00009 Elongation factor Tu GTP binding domain EBI04_RS01265 PF04760 Translation initiation factor IF-2, N-terminal region EBI04_RS01275 PF00575 S1 RNA binding domain EBI04_RS01275 PF08529 NusA N-terminal domain EBI04_RS01275 PF13184 NusA-like KH domain EBI04_RS01280 PF02576 RimP N-terminal domain EBI04_RS01280 PF17384 RimP C-terminal SH3 domain EBI04_RS01290 PF01872 RibD C-terminal domain EBI04_RS01290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EBI04_RS01295 PF00677 Lumazine binding domain EBI04_RS01300 PF00925 GTP cyclohydrolase II EBI04_RS01300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EBI04_RS01320 PF01642 Methylmalonyl-CoA mutase EBI04_RS01320 PF02310 B12 binding domain EBI04_RS01325 PF01642 Methylmalonyl-CoA mutase EBI04_RS01325 PF02310 B12 binding domain EBI04_RS01330 PF16916 Dimerisation domain of Zinc Transporter EBI04_RS01330 PF01545 Cation efflux family EBI04_RS01335 PF01336 OB-fold nucleic acid binding domain EBI04_RS01335 PF00152 tRNA synthetases class II (D, K and N) EBI04_RS01340 PF01272 Transcription elongation factor, GreA/GreB, C-term EBI04_RS01340 PF03449 Transcription elongation factor, N-terminal EBI04_RS01350 PF01219 Prokaryotic diacylglycerol kinase EBI04_RS01355 PF02130 Uncharacterized protein family UPF0054 EBI04_RS01360 PF02562 PhoH-like protein EBI04_RS01370 PF12127 SigmaW regulon antibacterial EBI04_RS01380 PF01488 Shikimate / quinate 5-dehydrogenase EBI04_RS01380 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EBI04_RS01380 PF08501 Shikimate dehydrogenase substrate binding domain EBI04_RS01385 PF01205 Uncharacterized protein family UPF0029 EBI04_RS01390 PF09281 Taq polymerase, exonuclease EBI04_RS01390 PF00476 DNA polymerase family A EBI04_RS01390 PF01367 5'-3' exonuclease, C-terminal SAM fold EBI04_RS01390 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EBI04_RS01410 PF07690 Major Facilitator Superfamily EBI04_RS01420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBI04_RS01420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBI04_RS01420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBI04_RS01420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBI04_RS01425 PF02033 Ribosome-binding factor A EBI04_RS01430 PF03061 Thioesterase superfamily EBI04_RS01435 PF00202 Aminotransferase class-III EBI04_RS01440 PF08206 Ribonuclease B OB domain EBI04_RS01440 PF00773 RNB domain EBI04_RS01440 PF00575 S1 RNA binding domain EBI04_RS01440 PF17876 Cold shock domain EBI04_RS01445 PF01875 Memo-like protein EBI04_RS01450 PF01743 Poly A polymerase head domain EBI04_RS01450 PF12627 Probable RNA and SrmB- binding site of polymerase A EBI04_RS01450 PF01966 HD domain EBI04_RS01455 PF01121 Dephospho-CoA kinase EBI04_RS01470 PF02660 Glycerol-3-phosphate acyltransferase EBI04_RS01475 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS01475 PF11862 Domain of unknown function (DUF3382) EBI04_RS01490 PF00005 ABC transporter EBI04_RS01500 PF13458 Periplasmic binding protein EBI04_RS01505 PF00206 Lyase EBI04_RS01505 PF14698 Argininosuccinate lyase C-terminal EBI04_RS01515 PF16363 GDP-mannose 4,6 dehydratase EBI04_RS01525 PF00689 Cation transporting ATPase, C-terminus EBI04_RS01525 PF00690 Cation transporter/ATPase, N-terminus EBI04_RS01530 PF00571 CBS domain EBI04_RS01530 PF01769 Divalent cation transporter EBI04_RS01530 PF03448 MgtE intracellular N domain EBI04_RS01535 PF01699 Sodium/calcium exchanger protein EBI04_RS01545 PF12706 Beta-lactamase superfamily domain EBI04_RS01545 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EBI04_RS01545 PF17770 Ribonuclease J C-terminal domain EBI04_RS01550 PF00013 KH domain EBI04_RS01550 PF00575 S1 RNA binding domain EBI04_RS01550 PF03725 3' exoribonuclease family, domain 2 EBI04_RS01550 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EBI04_RS01550 PF01138 3' exoribonuclease family, domain 1 EBI04_RS01555 PF00312 Ribosomal protein S15 EBI04_RS01570 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBI04_RS01575 PF09125 Cytochrome C oxidase subunit II, transmembrane EBI04_RS01575 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EBI04_RS01580 PF08113 Cytochrome c oxidase subunit IIa family EBI04_RS01585 PF00025 ADP-ribosylation factor family EBI04_RS01615 PF08207 Elongation factor P (EF-P) KOW-like domain EBI04_RS01615 PF01132 Elongation factor P (EF-P) OB domain EBI04_RS01615 PF09285 Elongation factor P, C-terminal EBI04_RS01620 PF00364 Biotin-requiring enzyme EBI04_RS01625 PF00289 Biotin carboxylase, N-terminal domain EBI04_RS01625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBI04_RS01625 PF02785 Biotin carboxylase C-terminal domain EBI04_RS01640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EBI04_RS01640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EBI04_RS01645 PF02681 Divergent PAP2 family EBI04_RS01655 PF02754 Cysteine-rich domain EBI04_RS01655 PF13183 4Fe-4S dicluster domain EBI04_RS01665 PF03741 Integral membrane protein TerC family EBI04_RS01670 PF00756 Putative esterase EBI04_RS01680 PF02190 ATP-dependent protease La (LON) substrate-binding domain EBI04_RS01680 PF00004 ATPase family associated with various cellular activities (AAA) EBI04_RS01680 PF05362 Lon protease (S16) C-terminal proteolytic domain EBI04_RS01685 PF00534 Glycosyl transferases group 1 EBI04_RS01685 PF13439 Glycosyltransferase Family 4 EBI04_RS01720 PF00227 Proteasome subunit EBI04_RS01725 PF00004 ATPase family associated with various cellular activities (AAA) EBI04_RS01725 PF10431 C-terminal, D2-small domain, of ClpB protein EBI04_RS01725 PF07724 AAA domain (Cdc48 subfamily) EBI04_RS01735 PF01568 Molydopterin dinucleotide binding domain EBI04_RS01735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EBI04_RS01735 PF00384 Molybdopterin oxidoreductase EBI04_RS01740 PF13247 4Fe-4S dicluster domain EBI04_RS01740 PF12800 4Fe-4S binding domain EBI04_RS01740 PF09163 Formate dehydrogenase N, transmembrane EBI04_RS01755 PF02634 FdhD/NarQ family EBI04_RS01760 PF02416 mttA/Hcf106 family EBI04_RS01785 PF00005 ABC transporter EBI04_RS01790 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS01795 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS01800 PF02608 ABC transporter substrate-binding protein PnrA-like EBI04_RS01805 PF00202 Aminotransferase class-III EBI04_RS01810 PF00293 NUDIX domain EBI04_RS01820 PF02142 MGS-like domain EBI04_RS01820 PF01808 AICARFT/IMPCHase bienzyme EBI04_RS01830 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EBI04_RS01835 PF00487 Fatty acid desaturase EBI04_RS01840 PF00563 EAL domain EBI04_RS01840 PF03707 Bacterial signalling protein N terminal repeat EBI04_RS01840 PF00990 Diguanylate cyclase, GGDEF domain EBI04_RS01845 PF02580 D-Tyr-tRNA(Tyr) deacylase EBI04_RS01850 PF02645 Uncharacterised protein, DegV family COG1307 EBI04_RS01855 PF02645 Uncharacterised protein, DegV family COG1307 EBI04_RS01860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBI04_RS01860 PF01842 ACT domain EBI04_RS01860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBI04_RS01870 PF17853 GGDEF-like domain EBI04_RS01870 PF13556 PucR C-terminal helix-turn-helix domain EBI04_RS01875 PF00701 Dihydrodipicolinate synthetase family EBI04_RS01880 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBI04_RS01885 PF00171 Aldehyde dehydrogenase family EBI04_RS01890 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal EBI04_RS01890 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal EBI04_RS01900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBI04_RS01915 PF12399 Branched-chain amino acid ATP-binding cassette transporter EBI04_RS01915 PF00005 ABC transporter EBI04_RS01920 PF00005 ABC transporter EBI04_RS01930 PF14535 AMP-binding enzyme C-terminal domain EBI04_RS01930 PF00501 AMP-binding enzyme EBI04_RS01940 PF07685 CobB/CobQ-like glutamine amidotransferase domain EBI04_RS01945 PF00155 Aminotransferase class I and II EBI04_RS01955 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EBI04_RS01955 PF02896 PEP-utilising enzyme, TIM barrel domain EBI04_RS01955 PF00391 PEP-utilising enzyme, mobile domain EBI04_RS01960 PF03746 LamB/YcsF family EBI04_RS01980 PF09084 NMT1/THI5 like EBI04_RS01985 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS01990 PF00005 ABC transporter EBI04_RS02000 PF04199 Putative cyclase EBI04_RS02010 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EBI04_RS02020 PF07687 Peptidase dimerisation domain EBI04_RS02020 PF01546 Peptidase family M20/M25/M40 EBI04_RS02030 PF08241 Methyltransferase domain EBI04_RS02035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EBI04_RS02040 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02045 PF12911 N-terminal TM domain of oligopeptide transport permease C EBI04_RS02045 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02050 PF01979 Amidohydrolase family EBI04_RS02055 PF03702 Anhydro-N-acetylmuramic acid kinase EBI04_RS02060 PF07702 UTRA domain EBI04_RS02060 PF00392 Bacterial regulatory proteins, gntR family EBI04_RS02065 PF00144 Beta-lactamase EBI04_RS02070 PF13580 SIS domain EBI04_RS02075 PF01915 Glycosyl hydrolase family 3 C-terminal domain EBI04_RS02075 PF00933 Glycosyl hydrolase family 3 N terminal domain EBI04_RS02085 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02090 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02095 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EBI04_RS02095 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBI04_RS02105 PF00512 His Kinase A (phospho-acceptor) domain EBI04_RS02105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS02110 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS02110 PF00072 Response regulator receiver domain EBI04_RS02135 PF07722 Peptidase C26 EBI04_RS02140 PF00128 Alpha amylase, catalytic domain EBI04_RS02140 PF02903 Alpha amylase, N-terminal ig-like domain EBI04_RS02140 PF16657 Maltogenic Amylase, C-terminal domain EBI04_RS02150 PF00582 Universal stress protein family EBI04_RS02155 PF02641 Uncharacterized ACR, COG1993 EBI04_RS02170 PF00488 MutS domain V EBI04_RS02170 PF01713 Smr domain EBI04_RS02175 PF01713 Smr domain EBI04_RS02175 PF00488 MutS domain V EBI04_RS02185 PF00512 His Kinase A (phospho-acceptor) domain EBI04_RS02185 PF00672 HAMP domain EBI04_RS02185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS02195 PF00072 Response regulator receiver domain EBI04_RS02195 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS02200 PF00034 Cytochrome c EBI04_RS02205 PF01566 Natural resistance-associated macrophage protein EBI04_RS02215 PF01522 Polysaccharide deacetylase EBI04_RS02230 PF02416 mttA/Hcf106 family EBI04_RS02235 PF00512 His Kinase A (phospho-acceptor) domain EBI04_RS02235 PF08521 Two-component sensor kinase N-terminal EBI04_RS02235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS02240 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS02240 PF00072 Response regulator receiver domain EBI04_RS02245 PF01569 PAP2 superfamily EBI04_RS02260 PF04239 Protein of unknown function (DUF421) EBI04_RS02275 PF17820 PDZ domain EBI04_RS02275 PF13180 PDZ domain EBI04_RS02285 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EBI04_RS02290 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EBI04_RS02290 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EBI04_RS02300 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EBI04_RS02305 PF00723 Glycosyl hydrolases family 15 EBI04_RS02305 PF09137 Glucodextranase, domain N EBI04_RS02310 PF00355 Rieske [2Fe-2S] domain EBI04_RS02315 PF01925 Sulfite exporter TauE/SafE EBI04_RS02325 PF01594 AI-2E family transporter EBI04_RS02340 PF00005 ABC transporter EBI04_RS02355 PF13519 von Willebrand factor type A domain EBI04_RS02355 PF01078 Magnesium chelatase, subunit ChlI EBI04_RS02355 PF17863 AAA lid domain EBI04_RS02375 PF03186 CobD/Cbib protein EBI04_RS02395 PF00300 Histidine phosphatase superfamily (branch 1) EBI04_RS02400 PF02277 Phosphoribosyltransferase EBI04_RS02405 PF02654 Cobalamin-5-phosphate synthase EBI04_RS02410 PF12557 Cob(I)alamin adenosyltransferase N terminal EBI04_RS02410 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EBI04_RS02420 PF07685 CobB/CobQ-like glutamine amidotransferase domain EBI04_RS02420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EBI04_RS02425 PF14306 PUA-like domain EBI04_RS02425 PF01747 ATP-sulfurylase EBI04_RS02430 PF14824 Sirohaem biosynthesis protein central EBI04_RS02430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBI04_RS02430 PF10414 Sirohaem synthase dimerisation region EBI04_RS02435 PF01925 Sulfite exporter TauE/SafE EBI04_RS02440 PF01507 Phosphoadenosine phosphosulfate reductase family EBI04_RS02445 PF14824 Sirohaem biosynthesis protein central EBI04_RS02445 PF10414 Sirohaem synthase dimerisation region EBI04_RS02445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBI04_RS02450 PF02602 Uroporphyrinogen-III synthase HemD EBI04_RS02460 PF02581 Thiamine monophosphate synthase EBI04_RS02465 PF02597 ThiS family EBI04_RS02470 PF05690 Thiazole biosynthesis protein ThiG EBI04_RS02475 PF05690 Thiazole biosynthesis protein ThiG EBI04_RS02475 PF01266 FAD dependent oxidoreductase EBI04_RS02480 PF01964 Radical SAM ThiC family EBI04_RS02495 PF08543 Phosphomethylpyrimidine kinase EBI04_RS02505 PF13193 AMP-binding enzyme C-terminal domain EBI04_RS02505 PF00501 AMP-binding enzyme EBI04_RS02510 PF00171 Aldehyde dehydrogenase family EBI04_RS02510 PF01575 MaoC like domain EBI04_RS02515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBI04_RS02515 PF02770 Acyl-CoA dehydrogenase, middle domain EBI04_RS02515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBI04_RS02520 PF00440 Bacterial regulatory proteins, tetR family EBI04_RS02520 PF17932 Tetracyclin repressor-like, C-terminal domain EBI04_RS02525 PF01950 Fructose-1,6-bisphosphatase EBI04_RS02540 PF03069 Acetamidase/Formamidase family EBI04_RS02550 PF00392 Bacterial regulatory proteins, gntR family EBI04_RS02550 PF07729 FCD domain EBI04_RS02555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EBI04_RS02560 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02565 PF12911 N-terminal TM domain of oligopeptide transport permease C EBI04_RS02565 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02580 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02595 PF00356 Bacterial regulatory proteins, lacI family EBI04_RS02605 PF03061 Thioesterase superfamily EBI04_RS02610 PF01717 Cobalamin-independent synthase, Catalytic domain EBI04_RS02610 PF08267 Cobalamin-independent synthase, N-terminal domain EBI04_RS02620 PF00317 Ribonucleotide reductase, all-alpha domain EBI04_RS02620 PF02867 Ribonucleotide reductase, barrel domain EBI04_RS02620 PF03477 ATP cone domain EBI04_RS02625 PF11495 Archaeal transcriptional regulator TrmB EBI04_RS02625 PF01978 Sugar-specific transcriptional regulator TrmB EBI04_RS02630 PF00676 Dehydrogenase E1 component EBI04_RS02635 PF02779 Transketolase, pyrimidine binding domain EBI04_RS02635 PF02780 Transketolase, C-terminal domain EBI04_RS02640 PF00364 Biotin-requiring enzyme EBI04_RS02640 PF02817 e3 binding domain EBI04_RS02640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBI04_RS02645 PF03480 Bacterial extracellular solute-binding protein, family 7 EBI04_RS02655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EBI04_RS02655 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EBI04_RS02665 PF08220 DeoR-like helix-turn-helix domain EBI04_RS02665 PF00455 DeoR C terminal sensor domain EBI04_RS02670 PF03437 BtpA family EBI04_RS02675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBI04_RS02675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBI04_RS02695 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02700 PF08402 TOBE domain EBI04_RS02700 PF00005 ABC transporter EBI04_RS02705 PF01261 Xylose isomerase-like TIM barrel EBI04_RS02715 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02720 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02730 PF13277 YmdB-like protein EBI04_RS02735 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02740 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02745 PF13416 Bacterial extracellular solute-binding protein EBI04_RS02750 PF08402 TOBE domain EBI04_RS02750 PF00005 ABC transporter EBI04_RS02765 PF13416 Bacterial extracellular solute-binding protein EBI04_RS02770 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02775 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02785 PF01297 Zinc-uptake complex component A periplasmic EBI04_RS02795 PF00535 Glycosyl transferase family 2 EBI04_RS02800 PF01975 Survival protein SurE EBI04_RS02805 PF13416 Bacterial extracellular solute-binding protein EBI04_RS02810 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02815 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02830 PF00005 ABC transporter EBI04_RS02840 PF00245 Alkaline phosphatase EBI04_RS02845 PF02635 DsrE/DsrF-like family EBI04_RS02850 PF00005 ABC transporter EBI04_RS02855 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02860 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS02865 PF00497 Bacterial extracellular solute-binding proteins, family 3 EBI04_RS02870 PF01774 UreD urease accessory protein EBI04_RS02875 PF02492 CobW/HypB/UreG, nucleotide-binding domain EBI04_RS02880 PF01730 UreF EBI04_RS02885 PF02814 UreE urease accessory protein, N-terminal domain EBI04_RS02890 PF00449 Urease alpha-subunit, N-terminal domain EBI04_RS02890 PF01979 Amidohydrolase family EBI04_RS02895 PF00547 Urease, gamma subunit EBI04_RS02895 PF00699 Urease beta subunit EBI04_RS02900 PF13386 Cytochrome C biogenesis protein transmembrane region EBI04_RS02905 PF00547 Urease, gamma subunit EBI04_RS02910 PF00005 ABC transporter EBI04_RS02915 PF00005 ABC transporter EBI04_RS02915 PF12399 Branched-chain amino acid ATP-binding cassette transporter EBI04_RS02925 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS02965 PF00293 NUDIX domain EBI04_RS03005 PF00005 ABC transporter EBI04_RS03020 PF02899 Phage integrase, N-terminal SAM-like domain EBI04_RS03020 PF00589 Phage integrase family EBI04_RS03035 PF05138 Phenylacetic acid catabolic protein EBI04_RS03055 PF01575 MaoC like domain EBI04_RS03055 PF00171 Aldehyde dehydrogenase family EBI04_RS03060 PF01638 HxlR-like helix-turn-helix EBI04_RS03065 PF00210 Ferritin-like domain EBI04_RS03070 PF00890 FAD binding domain EBI04_RS03070 PF02910 Fumarate reductase flavoprotein C-term EBI04_RS03075 PF02445 Quinolinate synthetase A protein EBI04_RS03080 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EBI04_RS03080 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EBI04_RS03090 PF03190 Protein of unknown function, DUF255 EBI04_RS03100 PF00108 Thiolase, N-terminal domain EBI04_RS03100 PF02803 Thiolase, C-terminal domain EBI04_RS03105 PF02682 Carboxyltransferase domain, subdomain C and D EBI04_RS03110 PF07690 Major Facilitator Superfamily EBI04_RS03120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBI04_RS03120 PF12806 Acetyl-CoA dehydrogenase C-terminal like EBI04_RS03120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBI04_RS03120 PF02770 Acyl-CoA dehydrogenase, middle domain EBI04_RS03125 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain EBI04_RS03125 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 EBI04_RS03140 PF00202 Aminotransferase class-III EBI04_RS03145 PF01297 Zinc-uptake complex component A periplasmic EBI04_RS03150 PF10509 Galactokinase galactose-binding signature EBI04_RS03150 PF00288 GHMP kinases N terminal domain EBI04_RS03150 PF08544 GHMP kinases C terminal EBI04_RS03155 PF10531 SLBB domain EBI04_RS03155 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EBI04_RS03155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EBI04_RS03160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EBI04_RS03160 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EBI04_RS03160 PF00384 Molybdopterin oxidoreductase EBI04_RS03160 PF01568 Molydopterin dinucleotide binding domain EBI04_RS03160 PF12838 4Fe-4S dicluster domain EBI04_RS03165 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EBI04_RS03165 PF01568 Molydopterin dinucleotide binding domain EBI04_RS03165 PF12838 4Fe-4S dicluster domain EBI04_RS03165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EBI04_RS03165 PF00384 Molybdopterin oxidoreductase EBI04_RS03170 PF03480 Bacterial extracellular solute-binding protein, family 7 EBI04_RS03175 PF00072 Response regulator receiver domain EBI04_RS03175 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS03180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS03180 PF00989 PAS fold EBI04_RS03180 PF00512 His Kinase A (phospho-acceptor) domain EBI04_RS03180 PF16736 Single Cache-like EBI04_RS03185 PF02770 Acyl-CoA dehydrogenase, middle domain EBI04_RS03185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBI04_RS03185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBI04_RS03190 PF01012 Electron transfer flavoprotein domain EBI04_RS03195 PF00766 Electron transfer flavoprotein FAD-binding domain EBI04_RS03195 PF01012 Electron transfer flavoprotein domain EBI04_RS03205 PF01039 Carboxyl transferase domain EBI04_RS03215 PF00196 Bacterial regulatory proteins, luxR family EBI04_RS03225 PF03167 Uracil DNA glycosylase superfamily EBI04_RS03230 PF02811 PHP domain EBI04_RS03230 PF14716 Helix-hairpin-helix domain EBI04_RS03230 PF14791 DNA polymerase beta thumb EBI04_RS03245 PF10371 Domain of unknown function EBI04_RS03245 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EBI04_RS03245 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EBI04_RS03245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBI04_RS03245 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EBI04_RS03250 PF02073 Thermophilic metalloprotease (M29) EBI04_RS03255 PF01053 Cys/Met metabolism PLP-dependent enzyme EBI04_RS03260 PF02254 TrkA-N domain EBI04_RS03260 PF00999 Sodium/hydrogen exchanger family EBI04_RS03265 PF00582 Universal stress protein family EBI04_RS03270 PF01430 Hsp33 protein EBI04_RS03275 PF09190 DALR domain EBI04_RS03275 PF01406 tRNA synthetases class I (C) catalytic domain EBI04_RS03280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBI04_RS03280 PF02770 Acyl-CoA dehydrogenase, middle domain EBI04_RS03280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBI04_RS03285 PF02803 Thiolase, C-terminal domain EBI04_RS03285 PF00108 Thiolase, N-terminal domain EBI04_RS03290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EBI04_RS03290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EBI04_RS03290 PF00378 Enoyl-CoA hydratase/isomerase EBI04_RS03305 PF00270 DEAD/DEAH box helicase EBI04_RS03305 PF02559 CarD-like/TRCF domain EBI04_RS03305 PF00271 Helicase conserved C-terminal domain EBI04_RS03305 PF03461 TRCF domain EBI04_RS03305 PF17757 UvrB interaction domain EBI04_RS03310 PF02645 Uncharacterised protein, DegV family COG1307 EBI04_RS03320 PF00534 Glycosyl transferases group 1 EBI04_RS03320 PF13439 Glycosyltransferase Family 4 EBI04_RS03325 PF13439 Glycosyltransferase Family 4 EBI04_RS03325 PF00534 Glycosyl transferases group 1 EBI04_RS03330 PF00534 Glycosyl transferases group 1 EBI04_RS03330 PF13439 Glycosyltransferase Family 4 EBI04_RS03335 PF00535 Glycosyl transferase family 2 EBI04_RS03345 PF01522 Polysaccharide deacetylase EBI04_RS03350 PF01266 FAD dependent oxidoreductase EBI04_RS03350 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EBI04_RS03355 PF04474 Protein of unknown function (DUF554) EBI04_RS03360 PF02686 Glu-tRNAGln amidotransferase C subunit EBI04_RS03365 PF02403 Seryl-tRNA synthetase N-terminal domain EBI04_RS03365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBI04_RS03370 PF13378 Enolase C-terminal domain-like EBI04_RS03370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EBI04_RS03380 PF01979 Amidohydrolase family EBI04_RS03395 PF07736 Chorismate mutase type I EBI04_RS03400 PF00171 Aldehyde dehydrogenase family EBI04_RS03410 PF01467 Cytidylyltransferase-like EBI04_RS03430 PF01053 Cys/Met metabolism PLP-dependent enzyme EBI04_RS03435 PF00561 alpha/beta hydrolase fold EBI04_RS03445 PF00202 Aminotransferase class-III EBI04_RS03450 PF02779 Transketolase, pyrimidine binding domain EBI04_RS03450 PF02780 Transketolase, C-terminal domain EBI04_RS03455 PF00676 Dehydrogenase E1 component EBI04_RS03460 PF00155 Aminotransferase class I and II EBI04_RS03465 PF00121 Triosephosphate isomerase EBI04_RS03470 PF00162 Phosphoglycerate kinase EBI04_RS03475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EBI04_RS03475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EBI04_RS03480 PF02632 BioY family EBI04_RS03485 PF00795 Carbon-nitrogen hydrolase EBI04_RS03490 PF01668 SmpB protein EBI04_RS03495 PF01520 N-acetylmuramoyl-L-alanine amidase EBI04_RS03495 PF11741 AMIN domain EBI04_RS03505 PF02463 RecF/RecN/SMC N terminal domain EBI04_RS03505 PF06470 SMC proteins Flexible Hinge Domain EBI04_RS03515 PF00578 AhpC/TSA family EBI04_RS03515 PF10417 C-terminal domain of 1-Cys peroxiredoxin EBI04_RS03525 PF04298 Putative neutral zinc metallopeptidase EBI04_RS03530 PF00581 Rhodanese-like domain EBI04_RS03535 PF03313 Serine dehydratase alpha chain EBI04_RS03540 PF00196 Bacterial regulatory proteins, luxR family EBI04_RS03540 PF00072 Response regulator receiver domain EBI04_RS03545 PF01245 Ribosomal protein L19 EBI04_RS03550 PF01746 tRNA (Guanine-1)-methyltransferase EBI04_RS03555 PF05239 PRC-barrel domain EBI04_RS03555 PF01782 RimM N-terminal domain EBI04_RS03565 PF00886 Ribosomal protein S16 EBI04_RS03570 PF02978 Signal peptide binding domain EBI04_RS03570 PF00448 SRP54-type protein, GTPase domain EBI04_RS03570 PF02881 SRP54-type protein, helical bundle domain EBI04_RS03575 PF03448 MgtE intracellular N domain EBI04_RS03575 PF00571 CBS domain EBI04_RS03575 PF01769 Divalent cation transporter EBI04_RS03585 PF02547 Queuosine biosynthesis protein EBI04_RS03595 PF00311 Phosphoenolpyruvate carboxylase EBI04_RS03620 PF03449 Transcription elongation factor, N-terminal EBI04_RS03620 PF01272 Transcription elongation factor, GreA/GreB, C-term EBI04_RS03625 PF01063 Amino-transferase class IV EBI04_RS03630 PF04715 Anthranilate synthase component I, N terminal region EBI04_RS03630 PF00425 chorismate binding enzyme EBI04_RS03635 PF02965 Vitamin B12 dependent methionine synthase, activation domain EBI04_RS03635 PF02310 B12 binding domain EBI04_RS03635 PF02574 Homocysteine S-methyltransferase EBI04_RS03635 PF00809 Pterin binding enzyme EBI04_RS03635 PF02607 B12 binding domain EBI04_RS03640 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EBI04_RS03640 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EBI04_RS03640 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain EBI04_RS03645 PF06689 ClpX C4-type zinc finger EBI04_RS03645 PF07724 AAA domain (Cdc48 subfamily) EBI04_RS03645 PF10431 C-terminal, D2-small domain, of ClpB protein EBI04_RS03650 PF00574 Clp protease EBI04_RS03655 PF05698 Bacterial trigger factor protein (TF) C-terminus EBI04_RS03655 PF05697 Bacterial trigger factor protein (TF) EBI04_RS03675 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EBI04_RS03675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EBI04_RS03680 PF06153 Cyclic-di-AMP receptor EBI04_RS03685 PF08704 tRNA methyltransferase complex GCD14 subunit EBI04_RS03690 PF05670 NFACT protein RNA binding domain EBI04_RS03695 PF02261 Aspartate decarboxylase EBI04_RS03705 PF04260 Protein of unknown function (DUF436) EBI04_RS03710 PF00266 Aminotransferase class-V EBI04_RS03715 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EBI04_RS03720 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EBI04_RS03720 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EBI04_RS03720 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EBI04_RS03725 PF00361 Proton-conducting membrane transporter EBI04_RS03740 PF00361 Proton-conducting membrane transporter EBI04_RS03760 PF00005 ABC transporter EBI04_RS03760 PF17912 MalK OB fold domain EBI04_RS03760 PF03459 TOBE domain EBI04_RS03765 PF00485 Phosphoribulokinase / Uridine kinase family EBI04_RS03785 PF14579 Helix-hairpin-helix motif EBI04_RS03785 PF00929 Exonuclease EBI04_RS03785 PF02811 PHP domain EBI04_RS03785 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBI04_RS03785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBI04_RS03790 PF01425 Amidase EBI04_RS03805 PF00265 Thymidine kinase EBI04_RS03815 PF01197 Ribosomal protein L31 EBI04_RS03830 PF02381 MraZ protein, putative antitoxin-like EBI04_RS03835 PF01795 MraW methylase family EBI04_RS03845 PF00905 Penicillin binding protein transpeptidase domain EBI04_RS03845 PF03717 Penicillin-binding Protein dimerisation domain EBI04_RS03850 PF02875 Mur ligase family, glutamate ligase domain EBI04_RS03850 PF01225 Mur ligase family, catalytic domain EBI04_RS03850 PF08245 Mur ligase middle domain EBI04_RS03860 PF00953 Glycosyl transferase family 4 EBI04_RS03865 PF02875 Mur ligase family, glutamate ligase domain EBI04_RS03865 PF08245 Mur ligase middle domain EBI04_RS03870 PF01098 Cell cycle protein EBI04_RS03875 PF04101 Glycosyltransferase family 28 C-terminal domain EBI04_RS03875 PF03033 Glycosyltransferase family 28 N-terminal domain EBI04_RS03880 PF01225 Mur ligase family, catalytic domain EBI04_RS03880 PF08245 Mur ligase middle domain EBI04_RS03880 PF02875 Mur ligase family, glutamate ligase domain EBI04_RS03885 PF01565 FAD binding domain EBI04_RS03885 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EBI04_RS03895 PF02491 SHS2 domain inserted in FTSA EBI04_RS03900 PF12327 FtsZ family, C-terminal domain EBI04_RS03900 PF00091 Tubulin/FtsZ family, GTPase domain EBI04_RS03905 PF02075 Crossover junction endodeoxyribonuclease RuvC EBI04_RS03925 PF04143 Sulphur transport EBI04_RS03930 PF01370 NAD dependent epimerase/dehydratase family EBI04_RS03930 PF08338 Domain of unknown function (DUF1731) EBI04_RS03935 PF13545 Crp-like helix-turn-helix domain EBI04_RS03935 PF00027 Cyclic nucleotide-binding domain EBI04_RS03950 PF03441 FAD binding domain of DNA photolyase EBI04_RS03950 PF00875 DNA photolyase EBI04_RS03960 PF00067 Cytochrome P450 EBI04_RS03975 PF00535 Glycosyl transferase family 2 EBI04_RS03975 PF00795 Carbon-nitrogen hydrolase EBI04_RS03985 PF01070 FMN-dependent dehydrogenase EBI04_RS04010 PF00355 Rieske [2Fe-2S] domain EBI04_RS04025 PF18357 Diphteria toxin repressor SH3 domain EBI04_RS04025 PF02742 Iron dependent repressor, metal binding and dimerisation domain EBI04_RS04025 PF01325 Iron dependent repressor, N-terminal DNA binding domain EBI04_RS04030 PF07930 D-aminopeptidase, domain B EBI04_RS04030 PF00144 Beta-lactamase EBI04_RS04045 PF00005 ABC transporter EBI04_RS04070 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS04075 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS04085 PF02423 Ornithine cyclodeaminase/mu-crystallin family EBI04_RS04100 PF04452 RNA methyltransferase EBI04_RS04115 PF10609 NUBPL iron-transfer P-loop NTPase EBI04_RS04115 PF01883 Iron-sulfur cluster assembly protein EBI04_RS04125 PF08264 Anticodon-binding domain of tRNA EBI04_RS04125 PF00133 tRNA synthetases class I (I, L, M and V) EBI04_RS04125 PF10458 Valyl tRNA synthetase tRNA binding arm EBI04_RS04135 PF17768 RecJ OB domain EBI04_RS04135 PF01368 DHH family EBI04_RS04135 PF02272 DHHA1 domain EBI04_RS04145 PF00977 Histidine biosynthesis protein EBI04_RS04185 PF00218 Indole-3-glycerol phosphate synthase EBI04_RS04190 PF01734 Patatin-like phospholipase EBI04_RS04200 PF00005 ABC transporter EBI04_RS04210 PF16868 NMT1-like family EBI04_RS04215 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS04220 PF00497 Bacterial extracellular solute-binding proteins, family 3 EBI04_RS04225 PF11897 Protein of unknown function (DUF3417) EBI04_RS04225 PF00343 Carbohydrate phosphorylase EBI04_RS04230 PF02386 Cation transport protein EBI04_RS04235 PF02080 TrkA-C domain EBI04_RS04235 PF02254 TrkA-N domain EBI04_RS04240 PF04055 Radical SAM superfamily EBI04_RS04240 PF18693 TRAM domain EBI04_RS04240 PF00919 Uncharacterized protein family UPF0004 EBI04_RS04250 PF04227 Indigoidine synthase A like protein EBI04_RS04260 PF03881 Fructosamine kinase EBI04_RS04265 PF01451 Low molecular weight phosphotyrosine protein phosphatase EBI04_RS04270 PF13492 GAF domain EBI04_RS04270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS04270 PF07730 Histidine kinase EBI04_RS04275 PF00588 SpoU rRNA Methylase family EBI04_RS04295 PF06071 Protein of unknown function (DUF933) EBI04_RS04295 PF01926 50S ribosome-binding GTPase EBI04_RS04310 PF02545 Maf-like protein EBI04_RS04325 PF00905 Penicillin binding protein transpeptidase domain EBI04_RS04335 PF04238 Protein of unknown function (DUF420) EBI04_RS04355 PF01960 ArgJ family EBI04_RS04360 PF02774 Semialdehyde dehydrogenase, dimerisation domain EBI04_RS04360 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBI04_RS04370 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBI04_RS04370 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBI04_RS04380 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS04385 PF00005 ABC transporter EBI04_RS04385 PF08402 TOBE domain EBI04_RS04395 PF03129 Anticodon binding domain EBI04_RS04395 PF13393 Histidyl-tRNA synthetase EBI04_RS04400 PF01336 OB-fold nucleic acid binding domain EBI04_RS04400 PF02938 GAD domain EBI04_RS04400 PF00152 tRNA synthetases class II (D, K and N) EBI04_RS04405 PF02567 Phenazine biosynthesis-like protein EBI04_RS04415 PF01336 OB-fold nucleic acid binding domain EBI04_RS04415 PF00152 tRNA synthetases class II (D, K and N) EBI04_RS04420 PF01174 SNO glutamine amidotransferase family EBI04_RS04425 PF06965 Na+/H+ antiporter 1 EBI04_RS04430 PF00403 Heavy-metal-associated domain EBI04_RS04435 PF01022 Bacterial regulatory protein, arsR family EBI04_RS04440 PF01680 SOR/SNZ family EBI04_RS04445 PF01551 Peptidase family M23 EBI04_RS04445 PF04225 Opacity-associated protein A LysM-like domain EBI04_RS04450 PF07498 Rho termination factor, N-terminal domain EBI04_RS04450 PF07497 Rho termination factor, RNA-binding domain EBI04_RS04450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EBI04_RS04460 PF08264 Anticodon-binding domain of tRNA EBI04_RS04460 PF00133 tRNA synthetases class I (I, L, M and V) EBI04_RS04465 PF01321 Creatinase/Prolidase N-terminal domain EBI04_RS04465 PF00557 Metallopeptidase family M24 EBI04_RS04470 PF03330 Lytic transglycolase EBI04_RS04475 PF01261 Xylose isomerase-like TIM barrel EBI04_RS04480 PF02384 N-6 DNA Methylase EBI04_RS04515 PF18766 SWI2/SNF2 ATPase EBI04_RS04515 PF11867 Domain of unknown function (DUF3387) EBI04_RS04515 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EBI04_RS04525 PF02163 Peptidase family M50 EBI04_RS04535 PF00571 CBS domain EBI04_RS04535 PF01368 DHH family EBI04_RS04535 PF01743 Poly A polymerase head domain EBI04_RS04535 PF02272 DHHA1 domain EBI04_RS04580 PF12950 TaqI-like C-terminal specificity domain EBI04_RS04580 PF07669 Eco57I restriction-modification methylase EBI04_RS04590 PF02463 RecF/RecN/SMC N terminal domain EBI04_RS04610 PF07963 Prokaryotic N-terminal methylation motif EBI04_RS04610 PF12019 Type II transport protein GspH EBI04_RS04655 PF00004 ATPase family associated with various cellular activities (AAA) EBI04_RS04655 PF10431 C-terminal, D2-small domain, of ClpB protein EBI04_RS04655 PF02861 Clp amino terminal domain, pathogenicity island component EBI04_RS04655 PF17871 AAA lid domain EBI04_RS04655 PF07724 AAA domain (Cdc48 subfamily) EBI04_RS04665 PF03458 UPF0126 domain EBI04_RS04680 PF00072 Response regulator receiver domain EBI04_RS04720 PF17762 HTH domain found in ParB protein EBI04_RS04720 PF02195 ParB-like nuclease domain EBI04_RS04745 PF04098 Rad52/22 family double-strand break repair protein EBI04_RS04755 PF13361 UvrD-like helicase C-terminal domain EBI04_RS04755 PF00580 UvrD/REP helicase N-terminal domain EBI04_RS04760 PF13361 UvrD-like helicase C-terminal domain EBI04_RS04760 PF00580 UvrD/REP helicase N-terminal domain EBI04_RS04770 PF13203 Putative metallopeptidase domain EBI04_RS04770 PF09967 VWA-like domain (DUF2201) EBI04_RS04775 PF07728 AAA domain (dynein-related subfamily) EBI04_RS04775 PF08406 CbbQ/NirQ/NorQ C-terminal EBI04_RS04890 PF00395 S-layer homology domain EBI04_RS04920 PF17820 PDZ domain EBI04_RS04920 PF02163 Peptidase family M50 EBI04_RS04975 PF00589 Phage integrase family EBI04_RS04975 PF12167 Arm DNA-binding domain EBI04_RS04985 PF00318 Ribosomal protein S2 EBI04_RS04990 PF00889 Elongation factor TS EBI04_RS04995 PF00696 Amino acid kinase family EBI04_RS05010 PF13288 DXP reductoisomerase C-terminal domain EBI04_RS05010 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EBI04_RS05010 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EBI04_RS05015 PF17820 PDZ domain EBI04_RS05015 PF02163 Peptidase family M50 EBI04_RS05030 PF03807 NADP oxidoreductase coenzyme F420-dependent EBI04_RS05030 PF14748 Pyrroline-5-carboxylate reductase dimerisation EBI04_RS05035 PF01029 NusB family EBI04_RS05035 PF01189 16S rRNA methyltransferase RsmB/F EBI04_RS05040 PF04232 Stage V sporulation protein S (SpoVS) EBI04_RS05050 PF02631 RecX family EBI04_RS05070 PF06798 PrkA serine protein kinase C-terminal domain EBI04_RS05070 PF08298 PrkA AAA domain EBI04_RS05075 PF04285 Protein of unknown function (DUF444) EBI04_RS05080 PF04293 SpoVR like protein EBI04_RS05085 PF00578 AhpC/TSA family EBI04_RS05090 PF00581 Rhodanese-like domain EBI04_RS05100 PF00753 Metallo-beta-lactamase superfamily EBI04_RS05105 PF00581 Rhodanese-like domain EBI04_RS05110 PF01925 Sulfite exporter TauE/SafE EBI04_RS05125 PF01208 Uroporphyrinogen decarboxylase (URO-D) EBI04_RS05130 PF00762 Ferrochelatase EBI04_RS05135 PF01593 Flavin containing amine oxidoreductase EBI04_RS05140 PF00990 Diguanylate cyclase, GGDEF domain EBI04_RS05140 PF07694 5TMR of 5TMR-LYT EBI04_RS05145 PF03707 Bacterial signalling protein N terminal repeat EBI04_RS05145 PF00990 Diguanylate cyclase, GGDEF domain EBI04_RS05145 PF00563 EAL domain EBI04_RS05150 PF01966 HD domain EBI04_RS05150 PF00072 Response regulator receiver domain EBI04_RS05185 PF07690 Major Facilitator Superfamily EBI04_RS05190 PF07690 Major Facilitator Superfamily EBI04_RS05195 PF02665 Nitrate reductase gamma subunit EBI04_RS05205 PF13247 4Fe-4S dicluster domain EBI04_RS05205 PF14711 Respiratory nitrate reductase beta C-terminal EBI04_RS05210 PF14710 Respiratory nitrate reductase alpha N-terminal EBI04_RS05210 PF01568 Molydopterin dinucleotide binding domain EBI04_RS05210 PF00384 Molybdopterin oxidoreductase EBI04_RS05215 PF00034 Cytochrome c EBI04_RS05225 PF13545 Crp-like helix-turn-helix domain EBI04_RS05225 PF00027 Cyclic nucleotide-binding domain EBI04_RS05235 PF02421 Ferrous iron transport protein B EBI04_RS05235 PF17910 FeoB cytosolic helical domain EBI04_RS05235 PF07664 Ferrous iron transport protein B C terminus EBI04_RS05235 PF07670 Nucleoside recognition EBI04_RS05260 PF13085 2Fe-2S iron-sulfur cluster binding domain EBI04_RS05275 PF00037 4Fe-4S binding domain EBI04_RS05285 PF04343 Protein of unknown function, DUF488 EBI04_RS05305 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EBI04_RS05315 PF00115 Cytochrome C and Quinol oxidase polypeptide I EBI04_RS05320 PF00034 Cytochrome c EBI04_RS05325 PF04304 Protein of unknown function (DUF454) EBI04_RS05355 PF13180 PDZ domain EBI04_RS05360 PF03576 Peptidase family S58 EBI04_RS05370 PF08240 Alcohol dehydrogenase GroES-like domain EBI04_RS05370 PF00107 Zinc-binding dehydrogenase EBI04_RS05375 PF17863 AAA lid domain EBI04_RS05375 PF07726 ATPase family associated with various cellular activities (AAA) EBI04_RS05390 PF00092 von Willebrand factor type A domain EBI04_RS05390 PF07584 Aerotolerance regulator N-terminal EBI04_RS05415 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EBI04_RS05415 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus EBI04_RS05420 PF00005 ABC transporter EBI04_RS05425 PF01471 Putative peptidoglycan binding domain EBI04_RS05425 PF17820 PDZ domain EBI04_RS05425 PF03572 Peptidase family S41 EBI04_RS05430 PF01588 Putative tRNA binding domain EBI04_RS05430 PF00133 tRNA synthetases class I (I, L, M and V) EBI04_RS05430 PF09334 tRNA synthetases class I (M) EBI04_RS05435 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EBI04_RS05440 PF00578 AhpC/TSA family EBI04_RS05450 PF04055 Radical SAM superfamily EBI04_RS05460 PF00290 Tryptophan synthase alpha chain EBI04_RS05465 PF00291 Pyridoxal-phosphate dependent enzyme EBI04_RS05470 PF02511 Thymidylate synthase complementing protein EBI04_RS05475 PF03120 NAD-dependent DNA ligase OB-fold domain EBI04_RS05475 PF00533 BRCA1 C Terminus (BRCT) domain EBI04_RS05475 PF12826 Helix-hairpin-helix motif EBI04_RS05475 PF01653 NAD-dependent DNA ligase adenylation domain EBI04_RS05480 PF02608 ABC transporter substrate-binding protein PnrA-like EBI04_RS05485 PF00005 ABC transporter EBI04_RS05510 PF00072 Response regulator receiver domain EBI04_RS05510 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS05515 PF00800 Prephenate dehydratase EBI04_RS05515 PF01817 Chorismate mutase type II EBI04_RS05520 PF00571 CBS domain EBI04_RS05535 PF01580 FtsK/SpoIIIE family EBI04_RS05535 PF09397 Ftsk gamma domain EBI04_RS05535 PF17854 FtsK alpha domain EBI04_RS05540 PF02675 S-adenosylmethionine decarboxylase EBI04_RS05545 PF17284 Spermidine synthase tetramerisation domain EBI04_RS05550 PF13462 Thioredoxin EBI04_RS05555 PF02254 TrkA-N domain EBI04_RS05555 PF00999 Sodium/hydrogen exchanger family EBI04_RS05560 PF01709 Transcriptional regulator EBI04_RS05565 PF07517 SecA DEAD-like domain EBI04_RS05565 PF01043 SecA preprotein cross-linking domain EBI04_RS05565 PF07516 SecA Wing and Scaffold domain EBI04_RS05570 PF00814 Glycoprotease family EBI04_RS05590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBI04_RS05590 PF02770 Acyl-CoA dehydrogenase, middle domain EBI04_RS05590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBI04_RS05600 PF01523 Putative modulator of DNA gyrase EBI04_RS05605 PF01523 Putative modulator of DNA gyrase EBI04_RS05620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBI04_RS05620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EBI04_RS05625 PF01925 Sulfite exporter TauE/SafE EBI04_RS05635 PF00156 Phosphoribosyl transferase domain EBI04_RS05640 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EBI04_RS05640 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EBI04_RS05645 PF01979 Amidohydrolase family EBI04_RS05655 PF01180 Dihydroorotate dehydrogenase EBI04_RS05665 PF02190 ATP-dependent protease La (LON) substrate-binding domain EBI04_RS05665 PF05362 Lon protease (S16) C-terminal proteolytic domain EBI04_RS05665 PF00004 ATPase family associated with various cellular activities (AAA) EBI04_RS05670 PF01434 Peptidase family M41 EBI04_RS05670 PF00004 ATPase family associated with various cellular activities (AAA) EBI04_RS05670 PF06480 FtsH Extracellular EBI04_RS05670 PF17862 AAA+ lid domain EBI04_RS05680 PF12804 MobA-like NTP transferase domain EBI04_RS05685 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EBI04_RS05685 PF01266 FAD dependent oxidoreductase EBI04_RS05695 PF00919 Uncharacterized protein family UPF0004 EBI04_RS05695 PF04055 Radical SAM superfamily EBI04_RS05695 PF01938 TRAM domain EBI04_RS05710 PF01266 FAD dependent oxidoreductase EBI04_RS05715 PF00180 Isocitrate/isopropylmalate dehydrogenase EBI04_RS05720 PF00773 RNB domain EBI04_RS05730 PF01142 tRNA pseudouridine synthase D (TruD) EBI04_RS05755 PF03061 Thioesterase superfamily EBI04_RS05765 PF01541 GIY-YIG catalytic domain EBI04_RS05765 PF08459 UvrC Helix-hairpin-helix N-terminal EBI04_RS05765 PF02151 UvrB/uvrC motif EBI04_RS05770 PF05746 DALR anticodon binding domain EBI04_RS05770 PF03485 Arginyl tRNA synthetase N terminal domain EBI04_RS05770 PF00750 tRNA synthetases class I (R) EBI04_RS05780 PF01712 Deoxynucleoside kinase EBI04_RS05785 PF01712 Deoxynucleoside kinase EBI04_RS05790 PF08245 Mur ligase middle domain EBI04_RS05790 PF02875 Mur ligase family, glutamate ligase domain EBI04_RS05790 PF01225 Mur ligase family, catalytic domain EBI04_RS05795 PF01134 Glucose inhibited division protein A EBI04_RS05805 PF00977 Histidine biosynthesis protein EBI04_RS05810 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EBI04_RS05810 PF01502 Phosphoribosyl-AMP cyclohydrolase EBI04_RS05815 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EBI04_RS05820 PF02867 Ribonucleotide reductase, barrel domain EBI04_RS05820 PF03477 ATP cone domain EBI04_RS05820 PF00317 Ribonucleotide reductase, all-alpha domain EBI04_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS05845 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS05850 PF00814 Glycoprotease family EBI04_RS05865 PF01026 TatD related DNase EBI04_RS05870 PF13396 Phospholipase_D-nuclease N-terminal EBI04_RS05870 PF13091 PLD-like domain EBI04_RS05885 PF13085 2Fe-2S iron-sulfur cluster binding domain EBI04_RS05890 PF00890 FAD binding domain EBI04_RS05890 PF02910 Fumarate reductase flavoprotein C-term EBI04_RS05900 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EBI04_RS05910 PF02675 S-adenosylmethionine decarboxylase EBI04_RS05920 PF00005 ABC transporter EBI04_RS05935 PF00156 Phosphoribosyl transferase domain EBI04_RS05935 PF01738 Dienelactone hydrolase family EBI04_RS05940 PF13193 AMP-binding enzyme C-terminal domain EBI04_RS05940 PF00501 AMP-binding enzyme EBI04_RS05945 PF00266 Aminotransferase class-V EBI04_RS05950 PF02082 Transcriptional regulator EBI04_RS05955 PF00950 ABC 3 transport family EBI04_RS05960 PF00005 ABC transporter EBI04_RS05965 PF02548 Ketopantoate hydroxymethyltransferase EBI04_RS05970 PF05491 RuvB C-terminal winged helix domain EBI04_RS05970 PF17864 RuvB AAA lid domain EBI04_RS05970 PF05496 Holliday junction DNA helicase RuvB P-loop domain EBI04_RS05985 PF01434 Peptidase family M41 EBI04_RS05985 PF17862 AAA+ lid domain EBI04_RS05985 PF06480 FtsH Extracellular EBI04_RS05985 PF00004 ATPase family associated with various cellular activities (AAA) EBI04_RS05990 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EBI04_RS05990 PF01266 FAD dependent oxidoreductase EBI04_RS05995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBI04_RS05995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBI04_RS06000 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EBI04_RS06000 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EBI04_RS06015 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EBI04_RS06015 PF00703 Glycosyl hydrolases family 2 EBI04_RS06015 PF16355 Domain of unknown function (DUF4982) EBI04_RS06015 PF02837 Glycosyl hydrolases family 2, sugar binding domain EBI04_RS06020 PF16338 Domain of unknown function (DUF4968) EBI04_RS06020 PF17137 Domain of unknown function (DUF5110) EBI04_RS06020 PF13802 Galactose mutarotase-like EBI04_RS06020 PF01055 Glycosyl hydrolases family 31 EBI04_RS06035 PF04794 YdjC-like protein EBI04_RS06045 PF01195 Peptidyl-tRNA hydrolase EBI04_RS06050 PF14693 Ribosomal protein TL5, C-terminal domain EBI04_RS06050 PF01386 Ribosomal L25p family EBI04_RS06055 PF14572 Phosphoribosyl synthetase-associated domain EBI04_RS06055 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EBI04_RS06060 PF01048 Phosphorylase superfamily EBI04_RS06065 PF02664 S-Ribosylhomocysteinase (LuxS) EBI04_RS06070 PF00117 Glutamine amidotransferase class-I EBI04_RS06070 PF00958 GMP synthase C terminal domain EBI04_RS06080 PF08734 GYD domain EBI04_RS06085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBI04_RS06095 PF00075 RNase H EBI04_RS06100 PF01039 Carboxyl transferase domain EBI04_RS06105 PF00682 HMGL-like EBI04_RS06135 PF01171 PP-loop family EBI04_RS06135 PF14437 MafB19-like deaminase EBI04_RS06155 PF00128 Alpha amylase, catalytic domain EBI04_RS06155 PF16657 Maltogenic Amylase, C-terminal domain EBI04_RS06160 PF00982 Glycosyltransferase family 20 EBI04_RS06165 PF00128 Alpha amylase, catalytic domain EBI04_RS06170 PF01209 ubiE/COQ5 methyltransferase family EBI04_RS06175 PF08241 Methyltransferase domain EBI04_RS06180 PF01965 DJ-1/PfpI family EBI04_RS06190 PF00795 Carbon-nitrogen hydrolase EBI04_RS06200 PF08331 Domain of unknown function (DUF1730) EBI04_RS06205 PF03447 Homoserine dehydrogenase, NAD binding domain EBI04_RS06205 PF00742 Homoserine dehydrogenase EBI04_RS06205 PF01842 ACT domain EBI04_RS06215 PF00291 Pyridoxal-phosphate dependent enzyme EBI04_RS06255 PF01171 PP-loop family EBI04_RS06260 PF02597 ThiS family EBI04_RS06265 PF00850 Histone deacetylase domain EBI04_RS06270 PF00571 CBS domain EBI04_RS06275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EBI04_RS06275 PF00005 ABC transporter EBI04_RS06280 PF00005 ABC transporter EBI04_RS06280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EBI04_RS06285 PF12911 N-terminal TM domain of oligopeptide transport permease C EBI04_RS06285 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS06305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EBI04_RS06315 PF00107 Zinc-binding dehydrogenase EBI04_RS06315 PF08240 Alcohol dehydrogenase GroES-like domain EBI04_RS06320 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBI04_RS06350 PF01588 Putative tRNA binding domain EBI04_RS06355 PF01380 SIS domain EBI04_RS06360 PF17760 UvrA interaction domain EBI04_RS06360 PF17755 UvrA DNA-binding domain EBI04_RS06360 PF00005 ABC transporter EBI04_RS06380 PF03060 Nitronate monooxygenase EBI04_RS06400 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS06400 PF00072 Response regulator receiver domain EBI04_RS06420 PF01116 Fructose-bisphosphate aldolase class-II EBI04_RS06425 PF00834 Ribulose-phosphate 3 epimerase family EBI04_RS06430 PF00485 Phosphoribulokinase / Uridine kinase family EBI04_RS06435 PF17866 AAA lid domain EBI04_RS06435 PF00004 ATPase family associated with various cellular activities (AAA) EBI04_RS06440 PF00101 Ribulose bisphosphate carboxylase, small chain EBI04_RS06445 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain EBI04_RS06445 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain EBI04_RS06450 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EBI04_RS06455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBI04_RS06455 PF03466 LysR substrate binding domain EBI04_RS06480 PF13419 Haloacid dehalogenase-like hydrolase EBI04_RS06485 PF01116 Fructose-bisphosphate aldolase class-II EBI04_RS06490 PF04029 2-phosphosulpholactate phosphatase EBI04_RS06495 PF00456 Transketolase, thiamine diphosphate binding domain EBI04_RS06495 PF02780 Transketolase, C-terminal domain EBI04_RS06495 PF02779 Transketolase, pyrimidine binding domain EBI04_RS06510 PF00589 Phage integrase family EBI04_RS06510 PF02899 Phage integrase, N-terminal SAM-like domain EBI04_RS06550 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system EBI04_RS06610 PF04255 Protein of unknown function (DUF433) EBI04_RS06675 PF03009 Glycerophosphoryl diester phosphodiesterase family EBI04_RS06680 PF01418 Helix-turn-helix domain, rpiR family EBI04_RS06680 PF01380 SIS domain EBI04_RS06690 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS06695 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS06700 PF13416 Bacterial extracellular solute-binding protein EBI04_RS06705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EBI04_RS06705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EBI04_RS06710 PF01266 FAD dependent oxidoreductase EBI04_RS06710 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EBI04_RS06760 PF03737 Aldolase/RraA EBI04_RS06765 PF02585 GlcNAc-PI de-N-acetylase EBI04_RS06780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBI04_RS06785 PF00171 Aldehyde dehydrogenase family EBI04_RS06790 PF13458 Periplasmic binding protein EBI04_RS06800 PF00005 ABC transporter EBI04_RS06800 PF12399 Branched-chain amino acid ATP-binding cassette transporter EBI04_RS06805 PF00005 ABC transporter EBI04_RS06815 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBI04_RS06820 PF00171 Aldehyde dehydrogenase family EBI04_RS06825 PF01557 Fumarylacetoacetate (FAA) hydrolase family EBI04_RS06830 PF01361 Tautomerase enzyme EBI04_RS06835 PF00682 HMGL-like EBI04_RS06835 PF07836 DmpG-like communication domain EBI04_RS06840 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation EBI04_RS06840 PF01118 Semialdehyde dehydrogenase, NAD binding domain EBI04_RS06845 PF01614 Bacterial transcriptional regulator EBI04_RS06845 PF09339 IclR helix-turn-helix domain EBI04_RS06855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBI04_RS06875 PF00005 ABC transporter EBI04_RS06880 PF00355 Rieske [2Fe-2S] domain EBI04_RS06880 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EBI04_RS06885 PF00866 Ring hydroxylating beta subunit EBI04_RS06895 PF01494 FAD binding domain EBI04_RS06905 PF00270 DEAD/DEAH box helicase EBI04_RS06905 PF00271 Helicase conserved C-terminal domain EBI04_RS06910 PF03453 MoeA N-terminal region (domain I and II) EBI04_RS06910 PF00994 Probable molybdopterin binding domain EBI04_RS06910 PF03454 MoeA C-terminal region (domain IV) EBI04_RS06920 PF10576 Iron-sulfur binding domain of endonuclease III EBI04_RS06920 PF00730 HhH-GPD superfamily base excision DNA repair protein EBI04_RS06920 PF00633 Helix-hairpin-helix motif EBI04_RS06930 PF00005 ABC transporter EBI04_RS06935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBI04_RS06935 PF09180 Prolyl-tRNA synthetase, C-terminal EBI04_RS06935 PF03129 Anticodon binding domain EBI04_RS06940 PF00082 Subtilase family EBI04_RS06945 PF01676 Metalloenzyme superfamily EBI04_RS06945 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase EBI04_RS06950 PF02272 DHHA1 domain EBI04_RS06950 PF01368 DHH family EBI04_RS06960 PF00293 NUDIX domain EBI04_RS06970 PF02224 Cytidylate kinase EBI04_RS06975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EBI04_RS06995 PF01238 Phosphomannose isomerase type I EBI04_RS07005 PF04493 Endonuclease V EBI04_RS07020 PF00004 ATPase family associated with various cellular activities (AAA) EBI04_RS07020 PF17862 AAA+ lid domain EBI04_RS07020 PF06480 FtsH Extracellular EBI04_RS07020 PF01434 Peptidase family M41 EBI04_RS07025 PF00012 Hsp70 protein EBI04_RS07030 PF01025 GrpE EBI04_RS07035 PF01556 DnaJ C terminal domain EBI04_RS07035 PF00226 DnaJ domain EBI04_RS07045 PF00004 ATPase family associated with various cellular activities (AAA) EBI04_RS07045 PF17871 AAA lid domain EBI04_RS07045 PF02861 Clp amino terminal domain, pathogenicity island component EBI04_RS07045 PF10431 C-terminal, D2-small domain, of ClpB protein EBI04_RS07045 PF07724 AAA domain (Cdc48 subfamily) EBI04_RS07075 PF09123 Domain of unknown function (DUF1931) EBI04_RS07085 PF02080 TrkA-C domain EBI04_RS07090 PF00999 Sodium/hydrogen exchanger family EBI04_RS07105 PF00571 CBS domain EBI04_RS07105 PF01368 DHH family EBI04_RS07105 PF12627 Probable RNA and SrmB- binding site of polymerase A EBI04_RS07105 PF01743 Poly A polymerase head domain EBI04_RS07105 PF02272 DHHA1 domain EBI04_RS07110 PF00999 Sodium/hydrogen exchanger family EBI04_RS07115 PF01464 Transglycosylase SLT domain EBI04_RS07120 PF03796 DnaB-like helicase C terminal domain EBI04_RS07120 PF00772 DnaB-like helicase N terminal domain EBI04_RS07120 PF14528 LAGLIDADG-like domain EBI04_RS07130 PF00384 Molybdopterin oxidoreductase EBI04_RS07130 PF01568 Molydopterin dinucleotide binding domain EBI04_RS07130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EBI04_RS07140 PF13247 4Fe-4S dicluster domain EBI04_RS07150 PF05384 Sensor protein DegS EBI04_RS07150 PF07730 Histidine kinase EBI04_RS07150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS07155 PF00072 Response regulator receiver domain EBI04_RS07155 PF00196 Bacterial regulatory proteins, luxR family EBI04_RS07160 PF01493 GXGXG motif EBI04_RS07160 PF01645 Conserved region in glutamate synthase EBI04_RS07160 PF04898 Glutamate synthase central domain EBI04_RS07160 PF00310 Glutamine amidotransferases class-II EBI04_RS07165 PF02754 Cysteine-rich domain EBI04_RS07170 PF13183 4Fe-4S dicluster domain EBI04_RS07170 PF11870 Domain of unknown function (DUF3390) EBI04_RS07170 PF02589 LUD domain EBI04_RS07180 PF10502 Signal peptidase, peptidase S26 EBI04_RS07185 PF01734 Patatin-like phospholipase EBI04_RS07190 PF03793 PASTA domain EBI04_RS07190 PF00069 Protein kinase domain EBI04_RS07200 PF01520 N-acetylmuramoyl-L-alanine amidase EBI04_RS07210 PF03309 Type III pantothenate kinase EBI04_RS07230 PF01966 HD domain EBI04_RS07240 PF00180 Isocitrate/isopropylmalate dehydrogenase EBI04_RS07265 PF00263 Bacterial type II and III secretion system protein EBI04_RS07265 PF03958 Bacterial type II/III secretion system short domain EBI04_RS07270 PF01264 Chorismate synthase EBI04_RS07275 PF01202 Shikimate kinase EBI04_RS07280 PF01761 3-dehydroquinate synthase EBI04_RS07290 PF01648 4'-phosphopantetheinyl transferase superfamily EBI04_RS07305 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EBI04_RS07305 PF01926 50S ribosome-binding GTPase EBI04_RS07320 PF02146 Sir2 family EBI04_RS07325 PF03853 YjeF-related protein N-terminus EBI04_RS07325 PF01256 Carbohydrate kinase EBI04_RS07330 PF00288 GHMP kinases N terminal domain EBI04_RS07330 PF08544 GHMP kinases C terminal EBI04_RS07340 PF17070 30S ribosomal protein Thx EBI04_RS07345 PF01649 Ribosomal protein S20 EBI04_RS07355 PF00579 tRNA synthetases class I (W and Y) EBI04_RS07360 PF00355 Rieske [2Fe-2S] domain EBI04_RS07370 PF03918 Cytochrome C biogenesis protein EBI04_RS07375 PF08534 Redoxin EBI04_RS07380 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EBI04_RS07380 PF01578 Cytochrome C assembly protein EBI04_RS07385 PF03100 CcmE EBI04_RS07390 PF01578 Cytochrome C assembly protein EBI04_RS07395 PF03379 CcmB protein EBI04_RS07400 PF00005 ABC transporter EBI04_RS07405 PF02683 Cytochrome C biogenesis protein transmembrane region EBI04_RS07415 PF00174 Oxidoreductase molybdopterin binding domain EBI04_RS07420 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBI04_RS07420 PF10518 TAT (twin-arginine translocation) pathway signal sequence EBI04_RS07420 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding EBI04_RS07445 PF00149 Calcineurin-like phosphoesterase EBI04_RS07445 PF02872 5'-nucleotidase, C-terminal domain EBI04_RS07475 PF00034 Cytochrome c EBI04_RS07480 PF08402 TOBE domain EBI04_RS07480 PF00005 ABC transporter EBI04_RS07500 PF00117 Glutamine amidotransferase class-I EBI04_RS07500 PF06418 CTP synthase N-terminus EBI04_RS07505 PF00572 Ribosomal protein L13 EBI04_RS07510 PF00380 Ribosomal protein S9/S16 EBI04_RS07535 PF00512 His Kinase A (phospho-acceptor) domain EBI04_RS07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS07535 PF00672 HAMP domain EBI04_RS07540 PF00072 Response regulator receiver domain EBI04_RS07540 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS07545 PF03793 PASTA domain EBI04_RS07545 PF00069 Protein kinase domain EBI04_RS07565 PF00490 Delta-aminolevulinic acid dehydratase EBI04_RS07570 PF02575 YbaB/EbfC DNA-binding family EBI04_RS07575 PF02132 RecR protein EBI04_RS07575 PF13662 Toprim domain EBI04_RS07600 PF07676 WD40-like Beta Propeller Repeat EBI04_RS07600 PF00326 Prolyl oligopeptidase family EBI04_RS07605 PF01784 NIF3 (NGG1p interacting factor 3) EBI04_RS07610 PF02223 Thymidylate kinase EBI04_RS07630 PF01812 5-formyltetrahydrofolate cyclo-ligase family EBI04_RS07635 PF13419 Haloacid dehalogenase-like hydrolase EBI04_RS07645 PF00156 Phosphoribosyl transferase domain EBI04_RS07660 PF01230 HIT domain EBI04_RS07665 PF04055 Radical SAM superfamily EBI04_RS07665 PF00919 Uncharacterized protein family UPF0004 EBI04_RS07670 PF03477 ATP cone domain EBI04_RS07670 PF02867 Ribonucleotide reductase, barrel domain EBI04_RS07670 PF00317 Ribonucleotide reductase, all-alpha domain EBI04_RS07670 PF02867 Ribonucleotide reductase, barrel domain EBI04_RS07670 PF03477 ATP cone domain EBI04_RS07670 PF00317 Ribonucleotide reductase, all-alpha domain EBI04_RS07680 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EBI04_RS07685 PF00459 Inositol monophosphatase family EBI04_RS07705 PF14464 Prokaryotic homologs of the JAB domain EBI04_RS07760 PF03144 Elongation factor Tu domain 2 EBI04_RS07760 PF03764 Elongation factor G, domain IV EBI04_RS07760 PF14492 Elongation Factor G, domain II EBI04_RS07760 PF00679 Elongation factor G C-terminus EBI04_RS07760 PF00009 Elongation factor Tu GTP binding domain EBI04_RS07765 PF17863 AAA lid domain EBI04_RS07765 PF07726 ATPase family associated with various cellular activities (AAA) EBI04_RS07770 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EBI04_RS07770 PF00391 PEP-utilising enzyme, mobile domain EBI04_RS07770 PF02896 PEP-utilising enzyme, TIM barrel domain EBI04_RS07775 PF03006 Haemolysin-III related EBI04_RS07780 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS07780 PF00072 Response regulator receiver domain EBI04_RS07785 PF00672 HAMP domain EBI04_RS07785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS07785 PF00512 His Kinase A (phospho-acceptor) domain EBI04_RS07820 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EBI04_RS07820 PF01488 Shikimate / quinate 5-dehydrogenase EBI04_RS07830 PF02627 Carboxymuconolactone decarboxylase family EBI04_RS07835 PF13419 Haloacid dehalogenase-like hydrolase EBI04_RS07850 PF10397 Adenylosuccinate lyase C-terminus EBI04_RS07850 PF00206 Lyase EBI04_RS07855 PF01259 SAICAR synthetase EBI04_RS07880 PF00156 Phosphoribosyl transferase domain EBI04_RS07890 PF00464 Serine hydroxymethyltransferase EBI04_RS07895 PF02463 RecF/RecN/SMC N terminal domain EBI04_RS07900 PF00990 Diguanylate cyclase, GGDEF domain EBI04_RS07905 PF01914 MarC family integral membrane protein EBI04_RS07910 PF01316 Arginine repressor, DNA binding domain EBI04_RS07910 PF02863 Arginine repressor, C-terminal domain EBI04_RS07915 PF04127 DNA / pantothenate metabolism flavoprotein EBI04_RS07915 PF02441 Flavoprotein EBI04_RS07920 PF01192 RNA polymerase Rpb6 EBI04_RS07925 PF00625 Guanylate kinase EBI04_RS07930 PF00128 Alpha amylase, catalytic domain EBI04_RS07930 PF02903 Alpha amylase, N-terminal ig-like domain EBI04_RS07930 PF16657 Maltogenic Amylase, C-terminal domain EBI04_RS07950 PF10079 Bacillithiol biosynthesis BshC EBI04_RS07955 PF00027 Cyclic nucleotide-binding domain EBI04_RS07955 PF13545 Crp-like helix-turn-helix domain EBI04_RS07960 PF02621 Menaquinone biosynthesis EBI04_RS07970 PF01916 Deoxyhypusine synthase EBI04_RS07985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EBI04_RS07995 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EBI04_RS07995 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EBI04_RS08000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EBI04_RS08000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EBI04_RS08005 PF00348 Polyprenyl synthetase EBI04_RS08015 PF06971 Putative DNA-binding protein N-terminus EBI04_RS08015 PF02629 CoA binding domain EBI04_RS08045 PF01196 Ribosomal protein L17 EBI04_RS08050 PF01000 RNA polymerase Rpb3/RpoA insert domain EBI04_RS08050 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EBI04_RS08050 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EBI04_RS08055 PF01479 S4 domain EBI04_RS08055 PF00163 Ribosomal protein S4/S9 N-terminal domain EBI04_RS08060 PF00411 Ribosomal protein S11 EBI04_RS08065 PF00416 Ribosomal protein S13/S18 EBI04_RS08070 PF00444 Ribosomal protein L36 EBI04_RS08075 PF01176 Translation initiation factor 1A / IF-1 EBI04_RS08080 PF00557 Metallopeptidase family M24 EBI04_RS08090 PF00344 SecY translocase EBI04_RS08095 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EBI04_RS08100 PF00327 Ribosomal protein L30p/L7e EBI04_RS08105 PF00333 Ribosomal protein S5, N-terminal domain EBI04_RS08105 PF03719 Ribosomal protein S5, C-terminal domain EBI04_RS08110 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EBI04_RS08115 PF00347 Ribosomal protein L6 EBI04_RS08120 PF00410 Ribosomal protein S8 EBI04_RS08125 PF00253 Ribosomal protein S14p/S29e EBI04_RS08130 PF00281 Ribosomal protein L5 EBI04_RS08130 PF00673 ribosomal L5P family C-terminus EBI04_RS08135 PF00467 KOW motif EBI04_RS08135 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EBI04_RS08140 PF00238 Ribosomal protein L14p/L23e EBI04_RS08145 PF00366 Ribosomal protein S17 EBI04_RS08150 PF00831 Ribosomal L29 protein EBI04_RS08155 PF00252 Ribosomal protein L16p/L10e EBI04_RS08160 PF07650 KH domain EBI04_RS08160 PF00189 Ribosomal protein S3, C-terminal domain EBI04_RS08165 PF00237 Ribosomal protein L22p/L17e EBI04_RS08170 PF00203 Ribosomal protein S19 EBI04_RS08175 PF00181 Ribosomal Proteins L2, RNA binding domain EBI04_RS08175 PF03947 Ribosomal Proteins L2, C-terminal domain EBI04_RS08180 PF00276 Ribosomal protein L23 EBI04_RS08185 PF00573 Ribosomal protein L4/L1 family EBI04_RS08190 PF00297 Ribosomal protein L3 EBI04_RS08195 PF00338 Ribosomal protein S10p/S20e EBI04_RS08200 PF03144 Elongation factor Tu domain 2 EBI04_RS08200 PF00009 Elongation factor Tu GTP binding domain EBI04_RS08200 PF03143 Elongation factor Tu C-terminal domain EBI04_RS08205 PF00679 Elongation factor G C-terminus EBI04_RS08205 PF14492 Elongation Factor G, domain II EBI04_RS08205 PF03764 Elongation factor G, domain IV EBI04_RS08205 PF00009 Elongation factor Tu GTP binding domain EBI04_RS08205 PF03144 Elongation factor Tu domain 2 EBI04_RS08210 PF00177 Ribosomal protein S7p/S5e EBI04_RS08215 PF00164 Ribosomal protein S12/S23 EBI04_RS08225 PF02687 FtsX-like permease family EBI04_RS08225 PF12704 MacB-like periplasmic core domain EBI04_RS08255 PF13684 Dihydroxyacetone kinase family EBI04_RS08255 PF02734 DAK2 domain EBI04_RS08260 PF03780 Asp23 family, cell envelope-related function EBI04_RS08270 PF01509 TruB family pseudouridylate synthase (N terminal domain) EBI04_RS08275 PF00378 Enoyl-CoA hydratase/isomerase EBI04_RS08280 PF01479 S4 domain EBI04_RS08280 PF00849 RNA pseudouridylate synthase EBI04_RS08285 PF00156 Phosphoribosyl transferase domain EBI04_RS08295 PF00709 Adenylosuccinate synthetase EBI04_RS08305 PF00117 Glutamine amidotransferase class-I EBI04_RS08315 PF00171 Aldehyde dehydrogenase family EBI04_RS08320 PF01619 Proline dehydrogenase EBI04_RS08325 PF00392 Bacterial regulatory proteins, gntR family EBI04_RS08325 PF07729 FCD domain EBI04_RS08345 PF00155 Aminotransferase class I and II EBI04_RS08350 PF07669 Eco57I restriction-modification methylase EBI04_RS08350 PF12950 TaqI-like C-terminal specificity domain EBI04_RS08360 PF00986 DNA gyrase B subunit, carboxyl terminus EBI04_RS08360 PF01751 Toprim domain EBI04_RS08360 PF00204 DNA gyrase B EBI04_RS08360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS08365 PF00271 Helicase conserved C-terminal domain EBI04_RS08365 PF04408 Helicase associated domain (HA2) EBI04_RS08365 PF08482 ATP-dependent helicase C-terminal EBI04_RS08365 PF00270 DEAD/DEAH box helicase EBI04_RS08375 PF13823 Alcohol dehydrogenase GroES-associated EBI04_RS08375 PF00107 Zinc-binding dehydrogenase EBI04_RS08375 PF08240 Alcohol dehydrogenase GroES-like domain EBI04_RS08430 PF01817 Chorismate mutase type II EBI04_RS08430 PF00793 DAHP synthetase I family EBI04_RS08435 PF00902 Sec-independent protein translocase protein (TatC) EBI04_RS08440 PF02416 mttA/Hcf106 family EBI04_RS08445 PF12804 MobA-like NTP transferase domain EBI04_RS08445 PF14602 Hexapeptide repeat of succinyl-transferase EBI04_RS08445 PF00132 Bacterial transferase hexapeptide (six repeats) EBI04_RS08450 PF02390 Putative methyltransferase EBI04_RS08460 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EBI04_RS08465 PF02021 Uncharacterised protein family UPF0102 EBI04_RS08475 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBI04_RS08485 PF01411 tRNA synthetases class II (A) EBI04_RS08485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBI04_RS08485 PF02272 DHHA1 domain EBI04_RS08500 PF00849 RNA pseudouridylate synthase EBI04_RS08500 PF01479 S4 domain EBI04_RS08505 PF04294 VanW like protein EBI04_RS08515 PF01131 DNA topoisomerase EBI04_RS08515 PF01751 Toprim domain EBI04_RS08515 PF01396 Topoisomerase DNA binding C4 zinc finger EBI04_RS08520 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EBI04_RS08520 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EBI04_RS08525 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EBI04_RS08525 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EBI04_RS08540 PF01790 Prolipoprotein diacylglyceryl transferase EBI04_RS08545 PF00155 Aminotransferase class I and II EBI04_RS08550 PF00011 Hsp20/alpha crystallin family EBI04_RS08560 PF00753 Metallo-beta-lactamase superfamily EBI04_RS08570 PF02566 OsmC-like protein EBI04_RS08575 PF01676 Metalloenzyme superfamily EBI04_RS08575 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EBI04_RS08580 PF01547 Bacterial extracellular solute-binding protein EBI04_RS08585 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS08590 PF00005 ABC transporter EBI04_RS08590 PF08402 TOBE domain EBI04_RS08595 PF01416 tRNA pseudouridine synthase EBI04_RS08600 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS08600 PF12911 N-terminal TM domain of oligopeptide transport permease C EBI04_RS08605 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS08610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EBI04_RS08615 PF01521 Iron-sulphur cluster biosynthesis EBI04_RS08620 PF01321 Creatinase/Prolidase N-terminal domain EBI04_RS08620 PF00557 Metallopeptidase family M24 EBI04_RS08625 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EBI04_RS08625 PF14572 Phosphoribosyl synthetase-associated domain EBI04_RS08640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EBI04_RS08640 PF17944 Arginine decarboxylase C-terminal helical extension EBI04_RS08640 PF17810 Arginine decarboxylase helical bundle domain EBI04_RS08645 PF00990 Diguanylate cyclase, GGDEF domain EBI04_RS08645 PF00072 Response regulator receiver domain EBI04_RS08650 PF02772 S-adenosylmethionine synthetase, central domain EBI04_RS08650 PF02773 S-adenosylmethionine synthetase, C-terminal domain EBI04_RS08650 PF00438 S-adenosylmethionine synthetase, N-terminal domain EBI04_RS08655 PF01177 Asp/Glu/Hydantoin racemase EBI04_RS08660 PF03641 Possible lysine decarboxylase EBI04_RS08665 PF01725 Ham1 family EBI04_RS08680 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS08680 PF14785 Maltose transport system permease protein MalF P2 domain EBI04_RS08685 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS08690 PF00128 Alpha amylase, catalytic domain EBI04_RS08690 PF02903 Alpha amylase, N-terminal ig-like domain EBI04_RS08700 PF01713 Smr domain EBI04_RS08700 PF00488 MutS domain V EBI04_RS08715 PF01451 Low molecular weight phosphotyrosine protein phosphatase EBI04_RS08720 PF01209 ubiE/COQ5 methyltransferase family EBI04_RS08725 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS08730 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS08740 PF04468 PSP1 C-terminal conserved region EBI04_RS08745 PF09115 DNA polymerase III, delta subunit, C terminal EBI04_RS08780 PF03129 Anticodon binding domain EBI04_RS08780 PF02824 TGS domain EBI04_RS08780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBI04_RS08780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBI04_RS08795 PF13416 Bacterial extracellular solute-binding protein EBI04_RS08815 PF00355 Rieske [2Fe-2S] domain EBI04_RS08820 PF13631 Cytochrome b(N-terminal)/b6/petB EBI04_RS08825 PF00575 S1 RNA binding domain EBI04_RS08830 PF07687 Peptidase dimerisation domain EBI04_RS08830 PF01546 Peptidase family M20/M25/M40 EBI04_RS08835 PF03129 Anticodon binding domain EBI04_RS08835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EBI04_RS08835 PF04073 Aminoacyl-tRNA editing domain EBI04_RS08855 PF01235 Sodium:alanine symporter family EBI04_RS08875 PF03749 Sugar fermentation stimulation protein RE domain EBI04_RS08875 PF17746 SfsA N-terminal OB domain EBI04_RS08905 PF04055 Radical SAM superfamily EBI04_RS08910 PF01875 Memo-like protein EBI04_RS08925 PF13419 Haloacid dehalogenase-like hydrolase EBI04_RS08940 PF00582 Universal stress protein family EBI04_RS08945 PF08032 RNA 2'-O ribose methyltransferase substrate binding EBI04_RS08945 PF00588 SpoU rRNA Methylase family EBI04_RS08950 PF01546 Peptidase family M20/M25/M40 EBI04_RS08960 PF00480 ROK family EBI04_RS09005 PF01227 GTP cyclohydrolase I EBI04_RS09015 PF00293 NUDIX domain EBI04_RS09025 PF00679 Elongation factor G C-terminus EBI04_RS09025 PF00009 Elongation factor Tu GTP binding domain EBI04_RS09025 PF03144 Elongation factor Tu domain 2 EBI04_RS09035 PF00004 ATPase family associated with various cellular activities (AAA) EBI04_RS09035 PF12002 MgsA AAA+ ATPase C terminal EBI04_RS09035 PF16193 AAA C-terminal domain EBI04_RS09040 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS09045 PF02515 CoA-transferase family III EBI04_RS09055 PF00005 ABC transporter EBI04_RS09070 PF02817 e3 binding domain EBI04_RS09070 PF00364 Biotin-requiring enzyme EBI04_RS09070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBI04_RS09075 PF12344 Ultra-violet resistance protein B EBI04_RS09075 PF04851 Type III restriction enzyme, res subunit EBI04_RS09075 PF17757 UvrB interaction domain EBI04_RS09075 PF00271 Helicase conserved C-terminal domain EBI04_RS09075 PF02151 UvrB/uvrC motif EBI04_RS09080 PF00395 S-layer homology domain EBI04_RS09085 PF01380 SIS domain EBI04_RS09090 PF00072 Response regulator receiver domain EBI04_RS09100 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBI04_RS09130 PF00551 Formyl transferase EBI04_RS09130 PF02911 Formyl transferase, C-terminal domain EBI04_RS09135 PF01327 Polypeptide deformylase EBI04_RS09145 PF02457 DisA bacterial checkpoint controller nucleotide-binding EBI04_RS09150 PF01676 Metalloenzyme superfamily EBI04_RS09185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EBI04_RS09195 PF04551 GcpE protein EBI04_RS09205 PF01594 AI-2E family transporter EBI04_RS09215 PF00830 Ribosomal L28 family EBI04_RS09220 PF01252 Signal peptidase (SPase) II EBI04_RS09225 PF00155 Aminotransferase class I and II EBI04_RS09230 PF00781 Diacylglycerol kinase catalytic domain EBI04_RS09245 PF00850 Histone deacetylase domain EBI04_RS09250 PF00588 SpoU rRNA Methylase family EBI04_RS09255 PF17191 RecG wedge domain EBI04_RS09255 PF00270 DEAD/DEAH box helicase EBI04_RS09255 PF13749 Putative ATP-dependent DNA helicase recG C-terminal EBI04_RS09260 PF00909 Ammonium Transporter Family EBI04_RS09265 PF00543 Nitrogen regulatory protein P-II EBI04_RS09270 PF01628 HrcA protein C terminal domain EBI04_RS09275 PF02391 MoaE protein EBI04_RS09285 PF05685 Putative restriction endonuclease EBI04_RS09290 PF04055 Radical SAM superfamily EBI04_RS09295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBI04_RS09295 PF02770 Acyl-CoA dehydrogenase, middle domain EBI04_RS09295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBI04_RS09305 PF00133 tRNA synthetases class I (I, L, M and V) EBI04_RS09305 PF08264 Anticodon-binding domain of tRNA EBI04_RS09305 PF13603 Leucyl-tRNA synthetase, Domain 2 EBI04_RS09320 PF00171 Aldehyde dehydrogenase family EBI04_RS09325 PF01472 PUA domain EBI04_RS09325 PF00696 Amino acid kinase family EBI04_RS09345 PF01923 Cobalamin adenosyltransferase EBI04_RS09355 PF00005 ABC transporter EBI04_RS09360 PF12679 ABC-2 family transporter protein EBI04_RS09390 PF03668 P-loop ATPase protein family EBI04_RS09395 PF01933 Uncharacterised protein family UPF0052 EBI04_RS09425 PF01409 tRNA synthetases class II core domain (F) EBI04_RS09425 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EBI04_RS09440 PF00365 Phosphofructokinase EBI04_RS09445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EBI04_RS09455 PF00719 Inorganic pyrophosphatase EBI04_RS09460 PF03009 Glycerophosphoryl diester phosphodiesterase family EBI04_RS09475 PF00753 Metallo-beta-lactamase superfamily EBI04_RS09475 PF13567 Domain of unknown function (DUF4131) EBI04_RS09475 PF03772 Competence protein EBI04_RS09480 PF17762 HTH domain found in ParB protein EBI04_RS09480 PF02195 ParB-like nuclease domain EBI04_RS09485 PF13614 AAA domain EBI04_RS09490 PF02527 rRNA small subunit methyltransferase G EBI04_RS09495 PF13932 GidA associated domain EBI04_RS09495 PF01134 Glucose inhibited division protein A EBI04_RS09500 PF11638 DnaA N-terminal domain EBI04_RS09500 PF00308 Bacterial dnaA protein EBI04_RS09500 PF08299 Bacterial dnaA protein helix-turn-helix EBI04_RS09505 PF02768 DNA polymerase III beta subunit, C-terminal domain EBI04_RS09505 PF00712 DNA polymerase III beta subunit, N-terminal domain EBI04_RS09505 PF02767 DNA polymerase III beta subunit, central domain EBI04_RS09510 PF00113 Enolase, C-terminal TIM barrel domain EBI04_RS09510 PF03952 Enolase, N-terminal domain EBI04_RS09515 PF00224 Pyruvate kinase, barrel domain EBI04_RS09515 PF02887 Pyruvate kinase, alpha/beta domain EBI04_RS09525 PF01139 tRNA-splicing ligase RtcB EBI04_RS09525 PF01139 tRNA-splicing ligase RtcB EBI04_RS09535 PF00334 Nucleoside diphosphate kinase EBI04_RS09550 PF00291 Pyridoxal-phosphate dependent enzyme EBI04_RS09570 PF00005 ABC transporter EBI04_RS09580 PF04012 PspA/IM30 family EBI04_RS09590 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EBI04_RS09590 PF02780 Transketolase, C-terminal domain EBI04_RS09590 PF02779 Transketolase, pyrimidine binding domain EBI04_RS09605 PF13186 Iron-sulfur cluster-binding domain EBI04_RS09605 PF04055 Radical SAM superfamily EBI04_RS09610 PF00034 Cytochrome c EBI04_RS09625 PF01967 MoaC family EBI04_RS09630 PF01266 FAD dependent oxidoreductase EBI04_RS09645 PF00809 Pterin binding enzyme EBI04_RS09650 PF02152 Dihydroneopterin aldolase EBI04_RS09655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EBI04_RS09660 PF00313 'Cold-shock' DNA-binding domain EBI04_RS09665 PF01975 Survival protein SurE EBI04_RS09685 PF03458 UPF0126 domain EBI04_RS09690 PF02542 YgbB family EBI04_RS09710 PF03745 Domain of unknown function (DUF309) EBI04_RS09715 PF12849 PBP superfamily domain EBI04_RS09720 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS09725 PF00005 ABC transporter EBI04_RS09725 PF09383 NIL domain EBI04_RS09735 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain EBI04_RS09735 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 EBI04_RS09745 PF01497 Periplasmic binding protein EBI04_RS09750 PF01032 FecCD transport family EBI04_RS09755 PF00005 ABC transporter EBI04_RS09760 PF13847 Methyltransferase domain EBI04_RS09770 PF08240 Alcohol dehydrogenase GroES-like domain EBI04_RS09770 PF00107 Zinc-binding dehydrogenase EBI04_RS09795 PF13344 Haloacid dehalogenase-like hydrolase EBI04_RS09795 PF00293 NUDIX domain EBI04_RS09800 PF00472 RF-1 domain EBI04_RS09800 PF03462 PCRF domain EBI04_RS09805 PF02535 ZIP Zinc transporter EBI04_RS09810 PF02630 SCO1/SenC EBI04_RS09825 PF00005 ABC transporter EBI04_RS09855 PF03819 MazG nucleotide pyrophosphohydrolase domain EBI04_RS09860 PF00293 NUDIX domain EBI04_RS09865 PF01965 DJ-1/PfpI family EBI04_RS09870 PF00696 Amino acid kinase family EBI04_RS09880 PF12169 DNA polymerase III subunits gamma and tau domain III EBI04_RS09885 PF02583 Metal-sensitive transcriptional repressor EBI04_RS09895 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EBI04_RS09895 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EBI04_RS09895 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EBI04_RS09900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EBI04_RS09920 PF02811 PHP domain EBI04_RS09920 PF14579 Helix-hairpin-helix motif EBI04_RS09920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EBI04_RS09920 PF07733 Bacterial DNA polymerase III alpha NTPase domain EBI04_RS09925 PF00118 TCP-1/cpn60 chaperonin family EBI04_RS09930 PF00166 Chaperonin 10 Kd subunit EBI04_RS09940 PF17863 AAA lid domain EBI04_RS09940 PF07726 ATPase family associated with various cellular activities (AAA) EBI04_RS09950 PF00588 SpoU rRNA Methylase family EBI04_RS09960 PF00342 Phosphoglucose isomerase EBI04_RS09965 PF01293 Phosphoenolpyruvate carboxykinase EBI04_RS09970 PF01040 UbiA prenyltransferase family EBI04_RS09970 PF02628 Cytochrome oxidase assembly protein EBI04_RS09975 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EBI04_RS09975 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EBI04_RS10010 PF13476 AAA domain EBI04_RS10015 PF07690 Major Facilitator Superfamily EBI04_RS10020 PF00005 ABC transporter EBI04_RS10025 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS10030 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS10035 PF12849 PBP superfamily domain EBI04_RS10050 PF00883 Cytosol aminopeptidase family, catalytic domain EBI04_RS10050 PF02789 Cytosol aminopeptidase family, N-terminal domain EBI04_RS10055 PF01475 Ferric uptake regulator family EBI04_RS10070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EBI04_RS10070 PF03466 LysR substrate binding domain EBI04_RS10080 PF00364 Biotin-requiring enzyme EBI04_RS10080 PF02817 e3 binding domain EBI04_RS10080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBI04_RS10095 PF08245 Mur ligase middle domain EBI04_RS10095 PF02875 Mur ligase family, glutamate ligase domain EBI04_RS10100 PF00155 Aminotransferase class I and II EBI04_RS10115 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS10120 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS10125 PF13416 Bacterial extracellular solute-binding protein EBI04_RS10145 PF03600 Citrate transporter EBI04_RS10155 PF02926 THUMP domain EBI04_RS10155 PF02568 Thiamine biosynthesis protein (ThiI) EBI04_RS10170 PF00135 Carboxylesterase family EBI04_RS10175 PF01351 Ribonuclease HII EBI04_RS10185 PF03480 Bacterial extracellular solute-binding protein, family 7 EBI04_RS10190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EBI04_RS10200 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EBI04_RS10215 PF01547 Bacterial extracellular solute-binding protein EBI04_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS10235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBI04_RS10235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBI04_RS10235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBI04_RS10235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBI04_RS10250 PF07690 Major Facilitator Superfamily EBI04_RS10260 PF00571 CBS domain EBI04_RS10260 PF00478 IMP dehydrogenase / GMP reductase domain EBI04_RS10265 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV EBI04_RS10295 PF02769 AIR synthase related protein, C-terminal domain EBI04_RS10295 PF00586 AIR synthase related protein, N-terminal domain EBI04_RS10300 PF02934 GatB/GatE catalytic domain EBI04_RS10300 PF02637 GatB domain EBI04_RS10305 PF00437 Type II/IV secretion system protein EBI04_RS10310 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EBI04_RS10310 PF00437 Type II/IV secretion system protein EBI04_RS10330 PF00885 6,7-dimethyl-8-ribityllumazine synthase EBI04_RS10335 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EBI04_RS10340 PF02641 Uncharacterized ACR, COG1993 EBI04_RS10345 PF00174 Oxidoreductase molybdopterin binding domain EBI04_RS10355 PF02811 PHP domain EBI04_RS10365 PF00730 HhH-GPD superfamily base excision DNA repair protein EBI04_RS10370 PF00857 Isochorismatase family EBI04_RS10380 PF10996 Beta-Casp domain EBI04_RS10380 PF00753 Metallo-beta-lactamase superfamily EBI04_RS10380 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EBI04_RS10405 PF00009 Elongation factor Tu GTP binding domain EBI04_RS10405 PF03144 Elongation factor Tu domain 2 EBI04_RS10405 PF03143 Elongation factor Tu C-terminal domain EBI04_RS10410 PF00471 Ribosomal protein L33 EBI04_RS10415 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EBI04_RS10420 PF00467 KOW motif EBI04_RS10420 PF02357 Transcription termination factor nusG EBI04_RS10425 PF03946 Ribosomal protein L11, N-terminal domain EBI04_RS10425 PF00298 Ribosomal protein L11, RNA binding domain EBI04_RS10430 PF00687 Ribosomal protein L1p/L10e family EBI04_RS10435 PF00466 Ribosomal protein L10 EBI04_RS10440 PF00542 Ribosomal protein L7/L12 C-terminal domain EBI04_RS10440 PF16320 Ribosomal protein L7/L12 dimerisation domain EBI04_RS10445 PF02441 Flavoprotein EBI04_RS10460 PF13847 Methyltransferase domain EBI04_RS10470 PF02770 Acyl-CoA dehydrogenase, middle domain EBI04_RS10470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EBI04_RS10470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EBI04_RS10475 PF01255 Putative undecaprenyl diphosphate synthase EBI04_RS10480 PF00682 HMGL-like EBI04_RS10495 PF00330 Aconitase family (aconitate hydratase) EBI04_RS10500 PF00694 Aconitase C-terminal domain EBI04_RS10510 PF08271 TFIIB zinc-binding EBI04_RS10515 PF08443 RimK-like ATP-grasp domain EBI04_RS10535 PF00696 Amino acid kinase family EBI04_RS10540 PF09210 Domain of unknown function (DUF1957) EBI04_RS10540 PF03065 Glycosyl hydrolase family 57 EBI04_RS10545 PF00795 Carbon-nitrogen hydrolase EBI04_RS10545 PF02540 NAD synthase EBI04_RS10550 PF02540 NAD synthase EBI04_RS10560 PF00730 HhH-GPD superfamily base excision DNA repair protein EBI04_RS10560 PF00633 Helix-hairpin-helix motif EBI04_RS10560 PF14815 NUDIX domain EBI04_RS10565 PF13932 GidA associated domain EBI04_RS10565 PF01134 Glucose inhibited division protein A EBI04_RS10585 PF01478 Type IV leader peptidase family EBI04_RS10585 PF06750 Bacterial Peptidase A24 N-terminal domain EBI04_RS10590 PF02074 Carboxypeptidase Taq (M32) metallopeptidase EBI04_RS10595 PF06779 Uncharacterised MFS-type transporter YbfB EBI04_RS10605 PF00005 ABC transporter EBI04_RS10610 PF03819 MazG nucleotide pyrophosphohydrolase domain EBI04_RS10615 PF02142 MGS-like domain EBI04_RS10620 PF13335 Magnesium chelatase, subunit ChlI C-terminal EBI04_RS10620 PF01078 Magnesium chelatase, subunit ChlI EBI04_RS10625 PF07690 Major Facilitator Superfamily EBI04_RS10630 PF00892 EamA-like transporter family EBI04_RS10640 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EBI04_RS10640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EBI04_RS10645 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EBI04_RS10650 PF02233 NAD(P) transhydrogenase beta subunit EBI04_RS10660 PF01250 Ribosomal protein S6 EBI04_RS10665 PF00436 Single-strand binding protein family EBI04_RS10670 PF01084 Ribosomal protein S18 EBI04_RS10675 PF03948 Ribosomal protein L9, C-terminal domain EBI04_RS10675 PF01281 Ribosomal protein L9, N-terminal domain EBI04_RS10685 PF00106 short chain dehydrogenase EBI04_RS10695 PF03099 Biotin/lipoate A/B protein ligase family EBI04_RS10700 PF04055 Radical SAM superfamily EBI04_RS10700 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EBI04_RS10710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EBI04_RS10710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EBI04_RS10725 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBI04_RS10725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBI04_RS10730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBI04_RS10730 PF00364 Biotin-requiring enzyme EBI04_RS10730 PF02817 e3 binding domain EBI04_RS10740 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system EBI04_RS10745 PF02779 Transketolase, pyrimidine binding domain EBI04_RS10745 PF02780 Transketolase, C-terminal domain EBI04_RS10750 PF00676 Dehydrogenase E1 component EBI04_RS10755 PF02590 Predicted SPOUT methyltransferase EBI04_RS10775 PF00483 Nucleotidyl transferase EBI04_RS10780 PF01209 ubiE/COQ5 methyltransferase family EBI04_RS10785 PF01894 Uncharacterised protein family UPF0047 EBI04_RS10790 PF02824 TGS domain EBI04_RS10790 PF04607 Region found in RelA / SpoT proteins EBI04_RS10790 PF13291 ACT domain EBI04_RS10800 PF00924 Mechanosensitive ion channel EBI04_RS10805 PF06778 Chlorite dismutase EBI04_RS10825 PF02424 ApbE family EBI04_RS10830 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS10830 PF00072 Response regulator receiver domain EBI04_RS10835 PF00672 HAMP domain EBI04_RS10835 PF00512 His Kinase A (phospho-acceptor) domain EBI04_RS10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS10840 PF00873 AcrB/AcrD/AcrF family EBI04_RS10865 PF01330 RuvA N terminal domain EBI04_RS10865 PF07499 RuvA, C-terminal domain EBI04_RS10870 PF00378 Enoyl-CoA hydratase/isomerase EBI04_RS10875 PF00676 Dehydrogenase E1 component EBI04_RS10875 PF16870 2-oxoglutarate dehydrogenase C-terminal EBI04_RS10875 PF02779 Transketolase, pyrimidine binding domain EBI04_RS10875 PF16078 2-oxoglutarate dehydrogenase N-terminus EBI04_RS10880 PF02817 e3 binding domain EBI04_RS10880 PF00364 Biotin-requiring enzyme EBI04_RS10880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EBI04_RS10885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBI04_RS10885 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBI04_RS10890 PF05922 Peptidase inhibitor I9 EBI04_RS10890 PF00082 Subtilase family EBI04_RS10900 PF00764 Arginosuccinate synthase EBI04_RS10905 PF00206 Lyase EBI04_RS10905 PF14698 Argininosuccinate lyase C-terminal EBI04_RS10910 PF00206 Lyase EBI04_RS10910 PF00583 Acetyltransferase (GNAT) family EBI04_RS10910 PF14698 Argininosuccinate lyase C-terminal EBI04_RS10925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EBI04_RS10925 PF00117 Glutamine amidotransferase class-I EBI04_RS10935 PF13635 Domain of unknown function (DUF4143) EBI04_RS10935 PF13173 AAA domain EBI04_RS10940 PF00291 Pyridoxal-phosphate dependent enzyme EBI04_RS10980 PF01943 Polysaccharide biosynthesis protein EBI04_RS10990 PF00535 Glycosyl transferase family 2 EBI04_RS10995 PF13439 Glycosyltransferase Family 4 EBI04_RS10995 PF00534 Glycosyl transferases group 1 EBI04_RS11030 PF00534 Glycosyl transferases group 1 EBI04_RS11030 PF13439 Glycosyltransferase Family 4 EBI04_RS11045 PF00829 Ribosomal prokaryotic L21 protein EBI04_RS11050 PF01016 Ribosomal L27 protein EBI04_RS11055 PF01018 GTP1/OBG EBI04_RS11055 PF09269 Domain of unknown function (DUF1967) EBI04_RS11055 PF01926 50S ribosome-binding GTPase EBI04_RS11060 PF01467 Cytidylyltransferase-like EBI04_RS11085 PF02569 Pantoate-beta-alanine ligase EBI04_RS11090 PF00437 Type II/IV secretion system protein EBI04_RS11150 PF02885 Glycosyl transferase family, helical bundle domain EBI04_RS11150 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EBI04_RS11150 PF00591 Glycosyl transferase family, a/b domain EBI04_RS11155 PF01551 Peptidase family M23 EBI04_RS11155 PF08460 Bacterial SH3 domain EBI04_RS11165 PF01039 Carboxyl transferase domain EBI04_RS11165 PF17848 Acetyl-coA carboxylase zinc finger domain EBI04_RS11170 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EBI04_RS11205 PF00037 4Fe-4S binding domain EBI04_RS11215 PF00313 'Cold-shock' DNA-binding domain EBI04_RS11220 PF01556 DnaJ C terminal domain EBI04_RS11220 PF00226 DnaJ domain EBI04_RS11220 PF00684 DnaJ central domain EBI04_RS11225 PF00266 Aminotransferase class-V EBI04_RS11230 PF02673 Bacitracin resistance protein BacA EBI04_RS11235 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EBI04_RS11240 PF00288 GHMP kinases N terminal domain EBI04_RS11240 PF08544 GHMP kinases C terminal EBI04_RS11255 PF08359 YsiA-like protein, C-terminal region EBI04_RS11255 PF00440 Bacterial regulatory proteins, tetR family EBI04_RS11265 PF09988 Uncharacterized metal-binding protein (DUF2227) EBI04_RS11275 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EBI04_RS11290 PF00037 4Fe-4S binding domain EBI04_RS11290 PF13247 4Fe-4S dicluster domain EBI04_RS11315 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBI04_RS11325 PF17158 Membrane-associated sensor, integral membrane domain EBI04_RS11325 PF00990 Diguanylate cyclase, GGDEF domain EBI04_RS11330 PF01546 Peptidase family M20/M25/M40 EBI04_RS11335 PF00202 Aminotransferase class-III EBI04_RS11340 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EBI04_RS11345 PF03725 3' exoribonuclease family, domain 2 EBI04_RS11345 PF00575 S1 RNA binding domain EBI04_RS11345 PF00013 KH domain EBI04_RS11345 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EBI04_RS11345 PF01138 3' exoribonuclease family, domain 1 EBI04_RS11350 PF00085 Thioredoxin EBI04_RS11355 PF02504 Fatty acid synthesis protein EBI04_RS11365 PF02585 GlcNAc-PI de-N-acetylase EBI04_RS11375 PF00082 Subtilase family EBI04_RS11375 PF05922 Peptidase inhibitor I9 EBI04_RS11380 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EBI04_RS11395 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EBI04_RS11395 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EBI04_RS11415 PF01592 NifU-like N terminal domain EBI04_RS11420 PF00266 Aminotransferase class-V EBI04_RS11435 PF01593 Flavin containing amine oxidoreductase EBI04_RS11440 PF00440 Bacterial regulatory proteins, tetR family EBI04_RS11450 PF07690 Major Facilitator Superfamily EBI04_RS11455 PF00027 Cyclic nucleotide-binding domain EBI04_RS11455 PF13545 Crp-like helix-turn-helix domain EBI04_RS11465 PF00268 Ribonucleotide reductase, small chain EBI04_RS11470 PF03551 Transcriptional regulator PadR-like family EBI04_RS11470 PF13847 Methyltransferase domain EBI04_RS11485 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EBI04_RS11495 PF01906 Putative heavy-metal-binding EBI04_RS11505 PF07732 Multicopper oxidase EBI04_RS11505 PF07731 Multicopper oxidase EBI04_RS11545 PF00672 HAMP domain EBI04_RS11545 PF00512 His Kinase A (phospho-acceptor) domain EBI04_RS11545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS11550 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS11550 PF00072 Response regulator receiver domain EBI04_RS11560 PF00403 Heavy-metal-associated domain EBI04_RS11565 PF02583 Metal-sensitive transcriptional repressor EBI04_RS11570 PF00403 Heavy-metal-associated domain EBI04_RS11575 PF00355 Rieske [2Fe-2S] domain EBI04_RS11580 PF01458 Uncharacterized protein family (UPF0051) EBI04_RS11585 PF01458 Uncharacterized protein family (UPF0051) EBI04_RS11590 PF00005 ABC transporter EBI04_RS11600 PF00463 Isocitrate lyase family EBI04_RS11605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EBI04_RS11605 PF07992 Pyridine nucleotide-disulphide oxidoreductase EBI04_RS11610 PF00005 ABC transporter EBI04_RS11615 PF00005 ABC transporter EBI04_RS11615 PF12704 MacB-like periplasmic core domain EBI04_RS11615 PF02687 FtsX-like permease family EBI04_RS11625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EBI04_RS11625 PF02272 DHHA1 domain EBI04_RS11625 PF01411 tRNA synthetases class II (A) EBI04_RS11635 PF03652 Holliday junction resolvase EBI04_RS11645 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS11665 PF13419 Haloacid dehalogenase-like hydrolase EBI04_RS11675 PF01571 Aminomethyltransferase folate-binding domain EBI04_RS11680 PF00994 Probable molybdopterin binding domain EBI04_RS11680 PF18146 Damage-inducible protein CinA KH domain EBI04_RS11680 PF02464 Competence-damaged protein EBI04_RS11685 PF02834 LigT like Phosphoesterase EBI04_RS11690 PF00154 recA bacterial DNA recombination protein EBI04_RS11695 PF01966 HD domain EBI04_RS11695 PF00013 KH domain EBI04_RS11695 PF12072 Domain of unknown function (DUF3552) EBI04_RS11705 PF07977 FabA-like domain EBI04_RS11715 PF04561 RNA polymerase Rpb2, domain 2 EBI04_RS11715 PF10385 RNA polymerase beta subunit external 1 domain EBI04_RS11715 PF04560 RNA polymerase Rpb2, domain 7 EBI04_RS11715 PF04563 RNA polymerase beta subunit EBI04_RS11715 PF00562 RNA polymerase Rpb2, domain 6 EBI04_RS11715 PF04565 RNA polymerase Rpb2, domain 3 EBI04_RS11720 PF00623 RNA polymerase Rpb1, domain 2 EBI04_RS11720 PF04997 RNA polymerase Rpb1, domain 1 EBI04_RS11720 PF04983 RNA polymerase Rpb1, domain 3 EBI04_RS11720 PF05000 RNA polymerase Rpb1, domain 4 EBI04_RS11720 PF04998 RNA polymerase Rpb1, domain 5 EBI04_RS11725 PF00596 Class II Aldolase and Adducin N-terminal domain EBI04_RS11735 PF00561 alpha/beta hydrolase fold EBI04_RS11740 PF01547 Bacterial extracellular solute-binding protein EBI04_RS11745 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS11750 PF06827 Zinc finger found in FPG and IleRS EBI04_RS11750 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EBI04_RS11750 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EBI04_RS11760 PF03061 Thioesterase superfamily EBI04_RS11765 PF01329 Pterin 4 alpha carbinolamine dehydratase EBI04_RS11775 PF02913 FAD linked oxidases, C-terminal domain EBI04_RS11775 PF01565 FAD binding domain EBI04_RS11790 PF00248 Aldo/keto reductase family EBI04_RS11800 PF01804 Penicillin amidase EBI04_RS11805 PF00478 IMP dehydrogenase / GMP reductase domain EBI04_RS11805 PF00571 CBS domain EBI04_RS11815 PF05362 Lon protease (S16) C-terminal proteolytic domain EBI04_RS11815 PF13654 AAA domain EBI04_RS11820 PF00483 Nucleotidyl transferase EBI04_RS11830 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS11830 PF00072 Response regulator receiver domain EBI04_RS11835 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like EBI04_RS11845 PF00534 Glycosyl transferases group 1 EBI04_RS11845 PF08323 Starch synthase catalytic domain EBI04_RS11860 PF02401 LytB protein EBI04_RS11875 PF00348 Polyprenyl synthetase EBI04_RS11885 PF06463 Molybdenum Cofactor Synthesis C EBI04_RS11885 PF04055 Radical SAM superfamily EBI04_RS12140 PF00589 Phage integrase family EBI04_RS12145 PF05977 Transmembrane secretion effector EBI04_RS12150 PF01022 Bacterial regulatory protein, arsR family EBI04_RS12170 PF00512 His Kinase A (phospho-acceptor) domain EBI04_RS12170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EBI04_RS12170 PF00672 HAMP domain EBI04_RS12175 PF00072 Response regulator receiver domain EBI04_RS12175 PF00486 Transcriptional regulatory protein, C terminal EBI04_RS12190 PF00027 Cyclic nucleotide-binding domain EBI04_RS12190 PF13545 Crp-like helix-turn-helix domain EBI04_RS12200 PF03091 CutA1 divalent ion tolerance protein EBI04_RS12210 PF01220 Dehydroquinase class II EBI04_RS12215 PF01551 Peptidase family M23 EBI04_RS12215 PF10145 Phage-related minor tail protein EBI04_RS12215 PF01464 Transglycosylase SLT domain EBI04_RS12225 PF00196 Bacterial regulatory proteins, luxR family EBI04_RS12225 PF00072 Response regulator receiver domain EBI04_RS12240 PF00664 ABC transporter transmembrane region EBI04_RS12240 PF00005 ABC transporter EBI04_RS12250 PF02875 Mur ligase family, glutamate ligase domain EBI04_RS12250 PF08245 Mur ligase middle domain EBI04_RS12255 PF00005 ABC transporter EBI04_RS12285 PF12911 N-terminal TM domain of oligopeptide transport permease C EBI04_RS12285 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS12290 PF00528 Binding-protein-dependent transport system inner membrane component EBI04_RS12295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EBI04_RS12300 PF00005 ABC transporter EBI04_RS12305 PF12399 Branched-chain amino acid ATP-binding cassette transporter EBI04_RS12305 PF00005 ABC transporter EBI04_RS12310 PF11862 Domain of unknown function (DUF3382) EBI04_RS12310 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS12315 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS12320 PF13458 Periplasmic binding protein EBI04_RS12325 PF03951 Glutamine synthetase, beta-Grasp domain EBI04_RS12325 PF00120 Glutamine synthetase, catalytic domain EBI04_RS12330 PF02872 5'-nucleotidase, C-terminal domain EBI04_RS12330 PF00149 Calcineurin-like phosphoesterase EBI04_RS12340 PF00034 Cytochrome c EBI04_RS12355 PF00488 MutS domain V EBI04_RS12355 PF05188 MutS domain II EBI04_RS12355 PF05192 MutS domain III EBI04_RS12355 PF01624 MutS domain I EBI04_RS12355 PF05190 MutS family domain IV EBI04_RS12360 PF01119 DNA mismatch repair protein, C-terminal domain EBI04_RS12360 PF08676 MutL C terminal dimerisation domain EBI04_RS12365 PF03737 Aldolase/RraA EBI04_RS12370 PF00551 Formyl transferase EBI04_RS12370 PF01842 ACT domain EBI04_RS12375 PF13180 PDZ domain EBI04_RS12375 PF17820 PDZ domain EBI04_RS12385 PF16868 NMT1-like family EBI04_RS12400 PF00571 CBS domain EBI04_RS12400 PF02163 Peptidase family M50 EBI04_RS12405 PF05977 Transmembrane secretion effector EBI04_RS12410 PF02350 UDP-N-acetylglucosamine 2-epimerase EBI04_RS12415 PF00953 Glycosyl transferase family 4 EBI04_RS12435 PF11497 NADH-quinone oxidoreductase chain 15 EBI04_RS12440 PF04055 Radical SAM superfamily EBI04_RS12440 PF06969 HemN C-terminal domain EBI04_RS12460 PF01850 PIN domain EBI04_RS12470 PF13183 4Fe-4S dicluster domain EBI04_RS12470 PF02754 Cysteine-rich domain EBI04_RS12475 PF02913 FAD linked oxidases, C-terminal domain EBI04_RS12475 PF01565 FAD binding domain EBI04_RS12480 PF01565 FAD binding domain EBI04_RS12480 PF02913 FAD linked oxidases, C-terminal domain EBI04_RS12485 PF01274 Malate synthase EBI04_RS12490 PF09339 IclR helix-turn-helix domain EBI04_RS12490 PF01614 Bacterial transcriptional regulator EBI04_RS12495 PF13411 MerR HTH family regulatory protein EBI04_RS12500 PF07687 Peptidase dimerisation domain EBI04_RS12500 PF01546 Peptidase family M20/M25/M40 EBI04_RS12510 PF04029 2-phosphosulpholactate phosphatase EBI04_RS12515 PF00027 Cyclic nucleotide-binding domain EBI04_RS12515 PF13545 Crp-like helix-turn-helix domain EBI04_RS12520 PF00005 ABC transporter EBI04_RS12525 PF01048 Phosphorylase superfamily EBI04_RS12530 PF00378 Enoyl-CoA hydratase/isomerase EBI04_RS12555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EBI04_RS12555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EBI04_RS12555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EBI04_RS12555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EBI04_RS12560 PF13361 UvrD-like helicase C-terminal domain EBI04_RS12560 PF00580 UvrD/REP helicase N-terminal domain EBI04_RS12570 PF02600 Disulfide bond formation protein DsbB EBI04_RS12585 PF07669 Eco57I restriction-modification methylase EBI04_RS12585 PF12950 TaqI-like C-terminal specificity domain EBI04_RS12590 PF00448 SRP54-type protein, GTPase domain EBI04_RS12590 PF02881 SRP54-type protein, helical bundle domain EBI04_RS12600 PF00749 tRNA synthetases class I (E and Q), catalytic domain EBI04_RS12605 PF00005 ABC transporter EBI04_RS12615 PF17827 PrmC N-terminal domain EBI04_RS12615 PF05175 Methyltransferase small domain EBI04_RS12625 PF02096 60Kd inner membrane protein EBI04_RS12630 PF01809 Putative membrane protein insertion efficiency factor EBI04_RS12635 PF00825 Ribonuclease P EBI04_RS12640 PF00468 Ribosomal protein L34 EBI04_RS12645 PF12399 Branched-chain amino acid ATP-binding cassette transporter EBI04_RS12645 PF00005 ABC transporter EBI04_RS12650 PF00501 AMP-binding enzyme EBI04_RS12655 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS12660 PF11862 Domain of unknown function (DUF3382) EBI04_RS12660 PF02653 Branched-chain amino acid transport system / permease component EBI04_RS12670 PF00005 ABC transporter EBI04_RS12675 PF00849 RNA pseudouridylate synthase EBI04_RS12680 PF01555 DNA methylase EBI04_RS12690 PF00155 Aminotransferase class I and II EBI04_RS12695 PF01966 HD domain EBI04_RS12695 PF13286 Phosphohydrolase-associated domain EBI04_RS12700 PF00109 Beta-ketoacyl synthase, N-terminal domain EBI04_RS12700 PF02801 Beta-ketoacyl synthase, C-terminal domain EBI04_RS12705 PF00550 Phosphopantetheine attachment site EBI04_RS12715 PF00698 Acyl transferase domain EBI04_RS12720 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EBI04_RS12720 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EBI04_RS12725 PF01783 Ribosomal L32p protein family EBI04_RS12735 PF00491 Arginase family EBI04_RS12745 PF00361 Proton-conducting membrane transporter EBI04_RS12750 PF00361 Proton-conducting membrane transporter EBI04_RS12755 PF00361 Proton-conducting membrane transporter EBI04_RS12755 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EBI04_RS12760 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EBI04_RS12765 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EBI04_RS12770 PF12838 4Fe-4S dicluster domain EBI04_RS12775 PF00146 NADH dehydrogenase EBI04_RS12780 PF00384 Molybdopterin oxidoreductase EBI04_RS12780 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EBI04_RS12780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EBI04_RS12780 PF01568 Molydopterin dinucleotide binding domain EBI04_RS12785 PF10531 SLBB domain EBI04_RS12785 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EBI04_RS12785 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EBI04_RS12795 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EBI04_RS12800 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EBI04_RS12805 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EBI04_RS12810 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EBI04_RS12815 PF00398 Ribosomal RNA adenine dimethylase EBI04_RS12825 PF04098 Rad52/22 family double-strand break repair protein EBI04_RS12865 PF00155 Aminotransferase class I and II EBI04_RS12870 PF00475 Imidazoleglycerol-phosphate dehydratase EBI04_RS12875 PF00117 Glutamine amidotransferase class-I EBI04_RS12880 PF00294 pfkB family carbohydrate kinase EBI04_RS12885 PF14535 AMP-binding enzyme C-terminal domain EBI04_RS12885 PF00501 AMP-binding enzyme EBI04_RS12890 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EBI04_RS12890 PF02222 ATP-grasp domain EBI04_RS12895 PF00731 AIR carboxylase EBI04_RS12910 PF03741 Integral membrane protein TerC family EBI04_RS12915 PF01883 Iron-sulfur cluster assembly protein EBI04_RS12920 PF06271 RDD family EBI04_RS12925 PF01343 Peptidase family S49 EBI04_RS12930 PF10672 S-adenosylmethionine-dependent methyltransferase EBI04_RS12930 PF17785 PUA-like domain EBI04_RS12935 PF00285 Citrate synthase, C-terminal domain EBI04_RS12940 PF00899 ThiF family EBI04_RS12945 PF12464 Maltose acetyltransferase EBI04_RS12945 PF14602 Hexapeptide repeat of succinyl-transferase EBI04_RS12945 PF00132 Bacterial transferase hexapeptide (six repeats) EBI04_RS12950 PF07650 KH domain EBI04_RS12950 PF01926 50S ribosome-binding GTPase EBI04_RS12955 PF17782 DprA winged helix domain EBI04_RS12955 PF02481 DNA recombination-mediator protein A EBI04_RS12960 PF05067 Manganese containing catalase EBI04_RS12980 PF01063 Amino-transferase class IV EBI04_RS12995 PF00588 SpoU rRNA Methylase family EBI04_RS12995 PF12105 SpoU, rRNA methylase, C-terminal EBI04_RS13000 PF01634 ATP phosphoribosyltransferase EBI04_RS13005 PF13393 Histidyl-tRNA synthetase EBI04_RS13010 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EBI04_RS13015 PF00692 dUTPase EBI04_RS13025 PF00583 Acetyltransferase (GNAT) family EBI04_RS13030 PF01661 Macro domain EBI04_RS13040 PF03477 ATP cone domain EBI04_RS13050 PF13344 Haloacid dehalogenase-like hydrolase EBI04_RS13050 PF00293 NUDIX domain EBI04_RS13060 PF01042 Endoribonuclease L-PSP EBI04_RS13075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)