THEOS_RS00020	PWY-1042	glycolysis IV (plant cytosol)
THEOS_RS00020	PWY-1622	formaldehyde assimilation I (serine pathway)
THEOS_RS00020	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THEOS_RS00020	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS00020	PWY-5723	Rubisco shunt
THEOS_RS00020	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THEOS_RS00020	PWY-6886	1-butanol autotrophic biosynthesis
THEOS_RS00020	PWY-6901	superpathway of glucose and xylose degradation
THEOS_RS00020	PWY-7003	glycerol degradation to butanol
THEOS_RS00020	PWY-7124	ethylene biosynthesis V (engineered)
THEOS_RS00020	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THEOS_RS00025	PWY-1042	glycolysis IV (plant cytosol)
THEOS_RS00025	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THEOS_RS00025	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS00025	PWY-5723	Rubisco shunt
THEOS_RS00025	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THEOS_RS00025	PWY-6886	1-butanol autotrophic biosynthesis
THEOS_RS00025	PWY-6901	superpathway of glucose and xylose degradation
THEOS_RS00025	PWY-7003	glycerol degradation to butanol
THEOS_RS00025	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THEOS_RS00025	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THEOS_RS00035	PWY-5686	UMP biosynthesis
THEOS_RS00040	PWY-5686	UMP biosynthesis
THEOS_RS00050	PWY-5667	CDP-diacylglycerol biosynthesis I
THEOS_RS00050	PWY-5981	CDP-diacylglycerol biosynthesis III
THEOS_RS00060	PWY-5392	reductive TCA cycle II
THEOS_RS00060	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THEOS_RS00085	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS00085	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THEOS_RS00155	PWY-5392	reductive TCA cycle II
THEOS_RS00155	PWY-5537	pyruvate fermentation to acetate V
THEOS_RS00155	PWY-5538	pyruvate fermentation to acetate VI
THEOS_RS00155	PWY-5690	TCA cycle II (plants and fungi)
THEOS_RS00155	PWY-5913	TCA cycle VI (obligate autotrophs)
THEOS_RS00155	PWY-6728	methylaspartate cycle
THEOS_RS00155	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THEOS_RS00155	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THEOS_RS00165	PWY-3801	sucrose degradation II (sucrose synthase)
THEOS_RS00165	PWY-5054	sorbitol biosynthesis I
THEOS_RS00165	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
THEOS_RS00165	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THEOS_RS00165	PWY-5659	GDP-mannose biosynthesis
THEOS_RS00165	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THEOS_RS00165	PWY-621	sucrose degradation III (sucrose invertase)
THEOS_RS00165	PWY-622	starch biosynthesis
THEOS_RS00165	PWY-6981	chitin biosynthesis
THEOS_RS00165	PWY-6992	1,5-anhydrofructose degradation
THEOS_RS00165	PWY-7238	sucrose biosynthesis II
THEOS_RS00165	PWY-7347	sucrose biosynthesis III
THEOS_RS00165	PWY-7385	1,3-propanediol biosynthesis (engineered)
THEOS_RS00170	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THEOS_RS00170	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THEOS_RS00185	PWY-3781	aerobic respiration I (cytochrome c)
THEOS_RS00185	PWY-4521	arsenite oxidation I (respiratory)
THEOS_RS00185	PWY-6692	Fe(II) oxidation
THEOS_RS00185	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THEOS_RS00270	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
THEOS_RS00270	PWY-6174	mevalonate pathway II (archaea)
THEOS_RS00270	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
THEOS_RS00270	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
THEOS_RS00270	PWY-7102	bisabolene biosynthesis
THEOS_RS00270	PWY-7391	isoprene biosynthesis II (engineered)
THEOS_RS00270	PWY-7524	mevalonate pathway III (archaea)
THEOS_RS00270	PWY-7560	methylerythritol phosphate pathway II
THEOS_RS00270	PWY-922	mevalonate pathway I
THEOS_RS00445	PWY-6823	molybdenum cofactor biosynthesis
THEOS_RS00445	PWY-6891	thiazole biosynthesis II (Bacillus)
THEOS_RS00445	PWY-6892	thiazole biosynthesis I (E. coli)
THEOS_RS00445	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
THEOS_RS00590	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THEOS_RS00640	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS00640	PWY-5686	UMP biosynthesis
THEOS_RS00640	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THEOS_RS00660	PWY-4983	L-citrulline-nitric oxide cycle
THEOS_RS00660	PWY-4984	urea cycle
THEOS_RS00660	PWY-5	canavanine biosynthesis
THEOS_RS00660	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS00660	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THEOS_RS00665	PWY-4983	L-citrulline-nitric oxide cycle
THEOS_RS00665	PWY-4984	urea cycle
THEOS_RS00665	PWY-5	canavanine biosynthesis
THEOS_RS00665	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS00665	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THEOS_RS00670	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
THEOS_RS00670	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THEOS_RS00675	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THEOS_RS00680	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THEOS_RS00775	PWY-5663	tetrahydrobiopterin biosynthesis I
THEOS_RS00775	PWY-5664	tetrahydrobiopterin biosynthesis II
THEOS_RS00775	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THEOS_RS00775	PWY-6703	preQ<sub>0</sub> biosynthesis
THEOS_RS00775	PWY-6983	tetrahydrobiopterin biosynthesis III
THEOS_RS00775	PWY-7442	drosopterin and aurodrosopterin biosynthesis
THEOS_RS00815	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THEOS_RS00815	PWY-6549	L-glutamine biosynthesis III
THEOS_RS00815	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THEOS_RS00815	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THEOS_RS00820	PWY-5674	nitrate reduction IV (dissimilatory)
THEOS_RS00870	PWY-6749	CMP-legionaminate biosynthesis I
THEOS_RS00930	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THEOS_RS00930	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THEOS_RS00930	PWY-5989	stearate biosynthesis II (bacteria and plants)
THEOS_RS00930	PWY-5994	palmitate biosynthesis I (animals and fungi)
THEOS_RS00930	PWY-6113	superpathway of mycolate biosynthesis
THEOS_RS00930	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THEOS_RS00930	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THEOS_RS00930	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THEOS_RS00930	PWY-7663	gondoate biosynthesis (anaerobic)
THEOS_RS00930	PWY-7664	oleate biosynthesis IV (anaerobic)
THEOS_RS00930	PWYG-321	mycolate biosynthesis
THEOS_RS00985	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
THEOS_RS01025	PWY-6700	queuosine biosynthesis
THEOS_RS01035	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THEOS_RS01035	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THEOS_RS01035	PWY-5989	stearate biosynthesis II (bacteria and plants)
THEOS_RS01035	PWY-6113	superpathway of mycolate biosynthesis
THEOS_RS01035	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THEOS_RS01035	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THEOS_RS01035	PWY-7663	gondoate biosynthesis (anaerobic)
THEOS_RS01035	PWY-7664	oleate biosynthesis IV (anaerobic)
THEOS_RS01035	PWYG-321	mycolate biosynthesis
THEOS_RS01060	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
THEOS_RS01130	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THEOS_RS01130	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THEOS_RS01185	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THEOS_RS01210	PWY-5057	L-valine degradation II
THEOS_RS01210	PWY-5076	L-leucine degradation III
THEOS_RS01210	PWY-5078	L-isoleucine degradation II
THEOS_RS01210	PWY-5101	L-isoleucine biosynthesis II
THEOS_RS01210	PWY-5103	L-isoleucine biosynthesis III
THEOS_RS01210	PWY-5104	L-isoleucine biosynthesis IV
THEOS_RS01210	PWY-5108	L-isoleucine biosynthesis V
THEOS_RS01245	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
THEOS_RS01245	PWY-2161	folate polyglutamylation
THEOS_RS01245	PWY-2201	folate transformations I
THEOS_RS01245	PWY-3841	folate transformations II
THEOS_RS01290	PWY-5381	pyridine nucleotide cycling (plants)
THEOS_RS01290	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THEOS_RS01325	PWY-1042	glycolysis IV (plant cytosol)
THEOS_RS01325	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THEOS_RS01325	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS01325	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THEOS_RS01325	PWY-7385	1,3-propanediol biosynthesis (engineered)
THEOS_RS01335	PWY-7181	pyrimidine deoxyribonucleosides degradation
THEOS_RS01350	PWY-4381	fatty acid biosynthesis initiation I
THEOS_RS01350	PWY-5743	3-hydroxypropanoate cycle
THEOS_RS01350	PWY-5744	glyoxylate assimilation
THEOS_RS01350	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THEOS_RS01350	PWY-6679	jadomycin biosynthesis
THEOS_RS01350	PWY-6722	candicidin biosynthesis
THEOS_RS01350	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THEOS_RS01355	PWY-4381	fatty acid biosynthesis initiation I
THEOS_RS01355	PWY-5743	3-hydroxypropanoate cycle
THEOS_RS01355	PWY-5744	glyoxylate assimilation
THEOS_RS01355	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THEOS_RS01355	PWY-6679	jadomycin biosynthesis
THEOS_RS01355	PWY-6722	candicidin biosynthesis
THEOS_RS01355	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THEOS_RS01495	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THEOS_RS01575	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
THEOS_RS01610	PWY-6123	inosine-5'-phosphate biosynthesis I
THEOS_RS01610	PWY-6124	inosine-5'-phosphate biosynthesis II
THEOS_RS01610	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THEOS_RS01610	PWY-7234	inosine-5'-phosphate biosynthesis III
THEOS_RS01615	PWY-6123	inosine-5'-phosphate biosynthesis I
THEOS_RS01615	PWY-6124	inosine-5'-phosphate biosynthesis II
THEOS_RS01615	PWY-7234	inosine-5'-phosphate biosynthesis III
THEOS_RS01620	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THEOS_RS01620	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THEOS_RS01620	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THEOS_RS01625	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THEOS_RS01625	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THEOS_RS01625	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THEOS_RS01635	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THEOS_RS01635	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THEOS_RS01635	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THEOS_RS01640	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THEOS_RS01640	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THEOS_RS01640	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THEOS_RS01640	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
THEOS_RS01650	PWY-1622	formaldehyde assimilation I (serine pathway)
THEOS_RS01650	PWY-181	photorespiration
THEOS_RS01650	PWY-2161	folate polyglutamylation
THEOS_RS01650	PWY-2201	folate transformations I
THEOS_RS01650	PWY-3661	glycine betaine degradation I
THEOS_RS01650	PWY-3661-1	glycine betaine degradation II (mammalian)
THEOS_RS01650	PWY-3841	folate transformations II
THEOS_RS01650	PWY-5497	purine nucleobases degradation II (anaerobic)
THEOS_RS01720	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THEOS_RS01720	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THEOS_RS01815	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THEOS_RS01815	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THEOS_RS01815	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THEOS_RS01815	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THEOS_RS01815	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THEOS_RS01815	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THEOS_RS01815	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THEOS_RS01815	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THEOS_RS01845	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS01890	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THEOS_RS01895	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THEOS_RS01895	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THEOS_RS01925	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THEOS_RS01925	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
THEOS_RS01930	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THEOS_RS01930	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THEOS_RS01950	PWY-40	putrescine biosynthesis I
THEOS_RS01950	PWY-43	putrescine biosynthesis II
THEOS_RS01950	PWY-6305	putrescine biosynthesis IV
THEOS_RS01950	PWY-6834	spermidine biosynthesis III
THEOS_RS02040	PWY-5350	thiosulfate disproportionation III (rhodanese)
THEOS_RS02115	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
THEOS_RS02115	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
THEOS_RS02115	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
THEOS_RS02115	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
THEOS_RS02115	PWY-6978	plastoquinol-9 biosynthesis II
THEOS_RS02145	PWY-6012	acyl carrier protein metabolism I
THEOS_RS02145	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
THEOS_RS02150	PWY-6825	phosphatidylcholine biosynthesis V
THEOS_RS02155	PWY-6164	3-dehydroquinate biosynthesis I
THEOS_RS02160	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THEOS_RS02165	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THEOS_RS02230	PWY-3961	phosphopantothenate biosynthesis II
THEOS_RS02300	PWY-6749	CMP-legionaminate biosynthesis I
THEOS_RS02325	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
THEOS_RS02325	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
THEOS_RS02325	PWY-7622	UDP-galactofuranose biosynthesis
THEOS_RS02415	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THEOS_RS02415	PWY-6416	quinate degradation II
THEOS_RS02415	PWY-6707	gallate biosynthesis
THEOS_RS02460	PWY-3801	sucrose degradation II (sucrose synthase)
THEOS_RS02460	PWY-3861	mannitol degradation II
THEOS_RS02460	PWY-3881	mannitol biosynthesis
THEOS_RS02460	PWY-5054	sorbitol biosynthesis I
THEOS_RS02460	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
THEOS_RS02460	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THEOS_RS02460	PWY-5659	GDP-mannose biosynthesis
THEOS_RS02460	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THEOS_RS02460	PWY-621	sucrose degradation III (sucrose invertase)
THEOS_RS02460	PWY-622	starch biosynthesis
THEOS_RS02460	PWY-6981	chitin biosynthesis
THEOS_RS02460	PWY-6992	1,5-anhydrofructose degradation
THEOS_RS02460	PWY-7238	sucrose biosynthesis II
THEOS_RS02460	PWY-7347	sucrose biosynthesis III
THEOS_RS02460	PWY-7385	1,3-propanediol biosynthesis (engineered)
THEOS_RS02460	PWY-7456	mannan degradation
THEOS_RS02460	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
THEOS_RS02460	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
THEOS_RS02490	PWY-2161	folate polyglutamylation
THEOS_RS02540	PWY-381	nitrate reduction II (assimilatory)
THEOS_RS02540	PWY-5675	nitrate reduction V (assimilatory)
THEOS_RS02540	PWY-6549	L-glutamine biosynthesis III
THEOS_RS02540	PWY-6963	ammonia assimilation cycle I
THEOS_RS02540	PWY-6964	ammonia assimilation cycle II
THEOS_RS02580	PWY-2201	folate transformations I
THEOS_RS02580	PWY-5497	purine nucleobases degradation II (anaerobic)
THEOS_RS02615	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
THEOS_RS02620	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THEOS_RS02620	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THEOS_RS02620	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THEOS_RS02625	PWY-7183	pyrimidine nucleobases salvage I
THEOS_RS02710	PWY-5686	UMP biosynthesis
THEOS_RS02720	PWY-5686	UMP biosynthesis
THEOS_RS02730	PWY-5686	UMP biosynthesis
THEOS_RS02735	PWY-7183	pyrimidine nucleobases salvage I
THEOS_RS02840	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
THEOS_RS02845	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THEOS_RS02845	PWY-6164	3-dehydroquinate biosynthesis I
THEOS_RS02845	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THEOS_RS02860	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
THEOS_RS02860	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
THEOS_RS02865	PWY-5198	factor 420 biosynthesis
THEOS_RS02865	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
THEOS_RS02865	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
THEOS_RS02900	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THEOS_RS02900	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
THEOS_RS02905	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THEOS_RS02905	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THEOS_RS02905	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THEOS_RS02965	PWY-6834	spermidine biosynthesis III
THEOS_RS02990	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
THEOS_RS03045	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THEOS_RS03045	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
THEOS_RS03045	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THEOS_RS03045	PWY-6936	seleno-amino acid biosynthesis
THEOS_RS03045	PWY-702	L-methionine biosynthesis II
THEOS_RS03060	PWY-5198	factor 420 biosynthesis
THEOS_RS03060	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
THEOS_RS03060	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
THEOS_RS03160	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THEOS_RS03185	PWY-4381	fatty acid biosynthesis initiation I
THEOS_RS03185	PWY-5743	3-hydroxypropanoate cycle
THEOS_RS03185	PWY-5744	glyoxylate assimilation
THEOS_RS03185	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THEOS_RS03185	PWY-6679	jadomycin biosynthesis
THEOS_RS03185	PWY-6722	candicidin biosynthesis
THEOS_RS03185	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THEOS_RS03220	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THEOS_RS03225	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
THEOS_RS03225	PWY-6153	autoinducer AI-2 biosynthesis I
THEOS_RS03225	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
THEOS_RS03230	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
THEOS_RS03230	PWY-6153	autoinducer AI-2 biosynthesis I
THEOS_RS03230	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
THEOS_RS03245	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
THEOS_RS03250	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THEOS_RS03250	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THEOS_RS03275	PWY-6654	phosphopantothenate biosynthesis III
THEOS_RS03285	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THEOS_RS03285	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THEOS_RS03315	PWY-5367	petroselinate biosynthesis
THEOS_RS03315	PWY-5515	L-arabinose degradation II
THEOS_RS03315	PWY-5525	D-glucuronate degradation I
THEOS_RS03315	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THEOS_RS03315	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THEOS_RS03315	PWY-5989	stearate biosynthesis II (bacteria and plants)
THEOS_RS03315	PWY-5994	palmitate biosynthesis I (animals and fungi)
THEOS_RS03315	PWY-6113	superpathway of mycolate biosynthesis
THEOS_RS03315	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THEOS_RS03315	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THEOS_RS03315	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THEOS_RS03315	PWY-7663	gondoate biosynthesis (anaerobic)
THEOS_RS03315	PWY-7664	oleate biosynthesis IV (anaerobic)
THEOS_RS03315	PWYG-321	mycolate biosynthesis
THEOS_RS03320	PWY-4381	fatty acid biosynthesis initiation I
THEOS_RS03320	PWY-6799	fatty acid biosynthesis (plant mitochondria)
THEOS_RS03320	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THEOS_RS03325	PWY-4381	fatty acid biosynthesis initiation I
THEOS_RS03340	PWY-31	canavanine degradation
THEOS_RS03340	PWY-4984	urea cycle
THEOS_RS03340	PWY-6305	putrescine biosynthesis IV
THEOS_RS03340	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THEOS_RS03585	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THEOS_RS03585	PWY-622	starch biosynthesis
THEOS_RS03595	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THEOS_RS03595	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THEOS_RS03595	PWY-6896	thiamin salvage I
THEOS_RS03595	PWY-6897	thiamin salvage II
THEOS_RS03635	PWY-6123	inosine-5'-phosphate biosynthesis I
THEOS_RS03635	PWY-7234	inosine-5'-phosphate biosynthesis III
THEOS_RS03735	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
THEOS_RS03735	PWY-6167	flavin biosynthesis II (archaea)
THEOS_RS03735	PWY-6168	flavin biosynthesis III (fungi)
THEOS_RS03770	PWY-2941	L-lysine biosynthesis II
THEOS_RS03770	PWY-2942	L-lysine biosynthesis III
THEOS_RS03770	PWY-5097	L-lysine biosynthesis VI
THEOS_RS03770	PWY-6559	spermidine biosynthesis II
THEOS_RS03770	PWY-6562	norspermidine biosynthesis
THEOS_RS03770	PWY-7153	grixazone biosynthesis
THEOS_RS03780	PWY-1622	formaldehyde assimilation I (serine pathway)
THEOS_RS03780	PWY-5392	reductive TCA cycle II
THEOS_RS03780	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THEOS_RS03780	PWY-5690	TCA cycle II (plants and fungi)
THEOS_RS03780	PWY-5913	TCA cycle VI (obligate autotrophs)
THEOS_RS03780	PWY-6728	methylaspartate cycle
THEOS_RS03780	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THEOS_RS03780	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THEOS_RS03780	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THEOS_RS03785	PWY-5392	reductive TCA cycle II
THEOS_RS03785	PWY-5537	pyruvate fermentation to acetate V
THEOS_RS03785	PWY-5538	pyruvate fermentation to acetate VI
THEOS_RS03785	PWY-5690	TCA cycle II (plants and fungi)
THEOS_RS03785	PWY-5913	TCA cycle VI (obligate autotrophs)
THEOS_RS03785	PWY-6728	methylaspartate cycle
THEOS_RS03785	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THEOS_RS03785	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THEOS_RS03790	PWY-5392	reductive TCA cycle II
THEOS_RS03790	PWY-5537	pyruvate fermentation to acetate V
THEOS_RS03790	PWY-5538	pyruvate fermentation to acetate VI
THEOS_RS03790	PWY-5690	TCA cycle II (plants and fungi)
THEOS_RS03790	PWY-5913	TCA cycle VI (obligate autotrophs)
THEOS_RS03790	PWY-6728	methylaspartate cycle
THEOS_RS03790	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THEOS_RS03790	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THEOS_RS03815	PWY-2941	L-lysine biosynthesis II
THEOS_RS03815	PWY-2942	L-lysine biosynthesis III
THEOS_RS03815	PWY-5097	L-lysine biosynthesis VI
THEOS_RS03815	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS03815	PWY-6559	spermidine biosynthesis II
THEOS_RS03815	PWY-6562	norspermidine biosynthesis
THEOS_RS03815	PWY-7153	grixazone biosynthesis
THEOS_RS03815	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THEOS_RS03835	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THEOS_RS03870	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
THEOS_RS03875	PWY-6854	ethylene biosynthesis III (microbes)
THEOS_RS03880	PWY-5392	reductive TCA cycle II
THEOS_RS03880	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THEOS_RS03880	PWY-5690	TCA cycle II (plants and fungi)
THEOS_RS03880	PWY-5913	TCA cycle VI (obligate autotrophs)
THEOS_RS03880	PWY-6728	methylaspartate cycle
THEOS_RS03880	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THEOS_RS03880	PWY-7254	TCA cycle VII (acetate-producers)
THEOS_RS03880	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THEOS_RS03900	PWY-4202	arsenate detoxification I (glutaredoxin)
THEOS_RS03900	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THEOS_RS03900	PWY-6608	guanosine nucleotides degradation III
THEOS_RS03900	PWY-6609	adenine and adenosine salvage III
THEOS_RS03900	PWY-6611	adenine and adenosine salvage V
THEOS_RS03900	PWY-6620	guanine and guanosine salvage
THEOS_RS03900	PWY-6627	salinosporamide A biosynthesis
THEOS_RS03900	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
THEOS_RS03900	PWY-7179	purine deoxyribonucleosides degradation I
THEOS_RS03900	PWY-7179-1	purine deoxyribonucleosides degradation
THEOS_RS03905	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THEOS_RS03955	PWY-7533	gliotoxin biosynthesis
THEOS_RS03965	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
THEOS_RS03965	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
THEOS_RS04010	PWY-6672	<i>cis</i>-genanyl-CoA degradation
THEOS_RS04010	PWY-7118	chitin degradation to ethanol
THEOS_RS04070	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THEOS_RS04075	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THEOS_RS04160	PWY-4261	glycerol degradation I
THEOS_RS04165	PWY-4261	glycerol degradation I
THEOS_RS04165	PWY-6118	glycerol-3-phosphate shuttle
THEOS_RS04165	PWY-6952	glycerophosphodiester degradation
THEOS_RS04170	PWY-6317	galactose degradation I (Leloir pathway)
THEOS_RS04170	PWY-6527	stachyose degradation
THEOS_RS04265	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THEOS_RS04265	PWY-5723	Rubisco shunt
THEOS_RS04310	PWY-5350	thiosulfate disproportionation III (rhodanese)
THEOS_RS04315	PWY-5350	thiosulfate disproportionation III (rhodanese)
THEOS_RS04325	PWY-5350	thiosulfate disproportionation III (rhodanese)
THEOS_RS04395	PWY-1622	formaldehyde assimilation I (serine pathway)
THEOS_RS04395	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THEOS_RS04395	PWY-5913	TCA cycle VI (obligate autotrophs)
THEOS_RS04395	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THEOS_RS04395	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
THEOS_RS04395	PWY-6549	L-glutamine biosynthesis III
THEOS_RS04395	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THEOS_RS04395	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THEOS_RS04395	PWY-7124	ethylene biosynthesis V (engineered)
THEOS_RS04400	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THEOS_RS04450	PWY-6749	CMP-legionaminate biosynthesis I
THEOS_RS04460	PWY-6700	queuosine biosynthesis
THEOS_RS04495	PWY-6829	tRNA methylation (yeast)
THEOS_RS04495	PWY-7285	methylwyosine biosynthesis
THEOS_RS04495	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
THEOS_RS04515	PWY-5350	thiosulfate disproportionation III (rhodanese)
THEOS_RS04575	PWY-1042	glycolysis IV (plant cytosol)
THEOS_RS04575	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS04575	PWY-6901	superpathway of glucose and xylose degradation
THEOS_RS04575	PWY-7003	glycerol degradation to butanol
THEOS_RS04580	PWY-1042	glycolysis IV (plant cytosol)
THEOS_RS04580	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS04580	PWY-6886	1-butanol autotrophic biosynthesis
THEOS_RS04580	PWY-6901	superpathway of glucose and xylose degradation
THEOS_RS04580	PWY-7003	glycerol degradation to butanol
THEOS_RS04680	PWY-6825	phosphatidylcholine biosynthesis V
THEOS_RS04690	PWY-6123	inosine-5'-phosphate biosynthesis I
THEOS_RS04690	PWY-6124	inosine-5'-phosphate biosynthesis II
THEOS_RS04690	PWY-7234	inosine-5'-phosphate biosynthesis III
THEOS_RS04700	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THEOS_RS04750	PWY-1042	glycolysis IV (plant cytosol)
THEOS_RS04750	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS04750	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THEOS_RS04750	PWY-7003	glycerol degradation to butanol
THEOS_RS04830	PWY-2941	L-lysine biosynthesis II
THEOS_RS04830	PWY-2942	L-lysine biosynthesis III
THEOS_RS04830	PWY-5097	L-lysine biosynthesis VI
THEOS_RS04845	PWY-7431	aromatic biogenic amine degradation (bacteria)
THEOS_RS04885	PWY-1341	phenylacetate degradation II (anaerobic)
THEOS_RS04885	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
THEOS_RS04885	PWY-7716	THEOS_RS04885
THEOS_RS04940	PWY-5176	coumarin biosynthesis (via 2-coumarate)
THEOS_RS05030	PWY-5316	nicotine biosynthesis
THEOS_RS05030	PWY-5381	pyridine nucleotide cycling (plants)
THEOS_RS05030	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THEOS_RS05030	PWY-7342	superpathway of nicotine biosynthesis
THEOS_RS05040	PWY-5316	nicotine biosynthesis
THEOS_RS05040	PWY-7342	superpathway of nicotine biosynthesis
THEOS_RS05160	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THEOS_RS05160	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THEOS_RS05160	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THEOS_RS05160	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THEOS_RS05245	PWY-6523	nitrite-dependent anaerobic methane oxidation
THEOS_RS05245	PWY-6748	nitrate reduction VII (denitrification)
THEOS_RS05245	PWY-7084	nitrifier denitrification
THEOS_RS05260	PWY-3781	aerobic respiration I (cytochrome c)
THEOS_RS05260	PWY-4521	arsenite oxidation I (respiratory)
THEOS_RS05260	PWY-6692	Fe(II) oxidation
THEOS_RS05260	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THEOS_RS05285	PWY-3781	aerobic respiration I (cytochrome c)
THEOS_RS05285	PWY-4521	arsenite oxidation I (respiratory)
THEOS_RS05285	PWY-6692	Fe(II) oxidation
THEOS_RS05285	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THEOS_RS05300	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS05350	PWY-5344	L-homocysteine biosynthesis
THEOS_RS05350	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
THEOS_RS05355	PWY-5344	L-homocysteine biosynthesis
THEOS_RS05370	PWY-4041	&gamma;-glutamyl cycle
THEOS_RS05370	PWY-5826	hypoglycin biosynthesis
THEOS_RS05465	PWY-2201	folate transformations I
THEOS_RS05575	PWY-2201	folate transformations I
THEOS_RS05590	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THEOS_RS05590	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THEOS_RS05600	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THEOS_RS05600	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THEOS_RS05600	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THEOS_RS05605	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THEOS_RS05605	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THEOS_RS05615	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THEOS_RS05615	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THEOS_RS05615	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THEOS_RS05615	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THEOS_RS05620	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THEOS_RS05620	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THEOS_RS05625	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THEOS_RS05625	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THEOS_RS05735	PWY-5943	&beta;-carotene biosynthesis
THEOS_RS05735	PWY-5947	lutein biosynthesis
THEOS_RS05735	PWY-7591	okenone biosynthesis
THEOS_RS05755	PWY-7039	phosphatidate metabolism, as a signaling molecule
THEOS_RS05810	PWY-6167	flavin biosynthesis II (archaea)
THEOS_RS05810	PWY-6168	flavin biosynthesis III (fungi)
THEOS_RS05810	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THEOS_RS05815	PWY-6167	flavin biosynthesis II (archaea)
THEOS_RS05815	PWY-6168	flavin biosynthesis III (fungi)
THEOS_RS05815	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THEOS_RS05820	PWY-5525	D-glucuronate degradation I
THEOS_RS05930	PWY-5941	glycogen degradation II (eukaryotic)
THEOS_RS05930	PWY-6731	starch degradation III
THEOS_RS05930	PWY-6737	starch degradation V
THEOS_RS05930	PWY-7238	sucrose biosynthesis II
THEOS_RS05955	PWY-6019	pseudouridine degradation
THEOS_RS05980	PWY-6004	glycine betaine biosynthesis V (from glycine)
THEOS_RS06005	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
THEOS_RS06075	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS06080	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS06080	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THEOS_RS06090	PWY-4981	L-proline biosynthesis II (from arginine)
THEOS_RS06090	PWY-4984	urea cycle
THEOS_RS06090	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THEOS_RS06125	PWY-5101	L-isoleucine biosynthesis II
THEOS_RS06125	PWY-6871	3-methylbutanol biosynthesis
THEOS_RS06130	PWY-6871	3-methylbutanol biosynthesis
THEOS_RS06135	PWY-5103	L-isoleucine biosynthesis III
THEOS_RS06135	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THEOS_RS06140	PWY-5101	L-isoleucine biosynthesis II
THEOS_RS06140	PWY-5103	L-isoleucine biosynthesis III
THEOS_RS06140	PWY-5104	L-isoleucine biosynthesis IV
THEOS_RS06140	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THEOS_RS06140	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THEOS_RS06140	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THEOS_RS06140	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THEOS_RS06145	PWY-5101	L-isoleucine biosynthesis II
THEOS_RS06145	PWY-5103	L-isoleucine biosynthesis III
THEOS_RS06145	PWY-5104	L-isoleucine biosynthesis IV
THEOS_RS06145	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THEOS_RS06145	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THEOS_RS06145	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THEOS_RS06145	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THEOS_RS06245	PWY-7396	butanol and isobutanol biosynthesis (engineered)
THEOS_RS06265	PWY-5101	L-isoleucine biosynthesis II
THEOS_RS06265	PWY-5103	L-isoleucine biosynthesis III
THEOS_RS06265	PWY-5104	L-isoleucine biosynthesis IV
THEOS_RS06265	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THEOS_RS06330	PWY-6672	<i>cis</i>-genanyl-CoA degradation
THEOS_RS06330	PWY-7118	chitin degradation to ethanol
THEOS_RS06335	PWY-6672	<i>cis</i>-genanyl-CoA degradation
THEOS_RS06335	PWY-7118	chitin degradation to ethanol
THEOS_RS06340	PWY-6672	<i>cis</i>-genanyl-CoA degradation
THEOS_RS06340	PWY-7118	chitin degradation to ethanol
THEOS_RS06350	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
THEOS_RS06350	PWY-5368	dimorphecolate biosynthesis
THEOS_RS06350	PWY-5995	linoleate biosynthesis I (plants)
THEOS_RS06350	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
THEOS_RS06350	PWY-6803	phosphatidylcholine acyl editing
THEOS_RS06350	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
THEOS_RS06350	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
THEOS_RS06350	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
THEOS_RS06350	PWY-7470	phosphatidylcholine biosynthesis VII
THEOS_RS06350	PWY-7618	ricinoleate biosynthesis
THEOS_RS06390	PWY-5941	glycogen degradation II (eukaryotic)
THEOS_RS06390	PWY-6724	starch degradation II
THEOS_RS06390	PWY-6737	starch degradation V
THEOS_RS06390	PWY-7238	sucrose biosynthesis II
THEOS_RS06395	PWY-1361	benzoyl-CoA degradation I (aerobic)
THEOS_RS06395	PWY-5109	2-methylbutanoate biosynthesis
THEOS_RS06395	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
THEOS_RS06395	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
THEOS_RS06395	PWY-5177	glutaryl-CoA degradation
THEOS_RS06395	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THEOS_RS06395	PWY-6435	4-hydroxybenzoate biosynthesis V
THEOS_RS06395	PWY-6583	pyruvate fermentation to butanol I
THEOS_RS06395	PWY-6863	pyruvate fermentation to hexanol
THEOS_RS06395	PWY-6883	pyruvate fermentation to butanol II
THEOS_RS06395	PWY-6944	androstenedione degradation
THEOS_RS06395	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
THEOS_RS06395	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
THEOS_RS06395	PWY-7007	methyl ketone biosynthesis
THEOS_RS06395	PWY-7046	4-coumarate degradation (anaerobic)
THEOS_RS06395	PWY-7094	fatty acid salvage
THEOS_RS06395	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
THEOS_RS06395	PWY-735	jasmonic acid biosynthesis
THEOS_RS06395	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
THEOS_RS06395	PWY-7606	docosahexaenoate biosynthesis III (mammals)
THEOS_RS06395	PWY-7726	THEOS_RS06395
THEOS_RS06430	PWY-4261	glycerol degradation I
THEOS_RS06620	PWY-5667	CDP-diacylglycerol biosynthesis I
THEOS_RS06620	PWY-5981	CDP-diacylglycerol biosynthesis III
THEOS_RS06625	PWY-7294	xylose degradation IV
THEOS_RS06625	PWY-7295	L-arabinose degradation IV
THEOS_RS06625	PWY-7560	methylerythritol phosphate pathway II
THEOS_RS06645	PWY-3341	L-proline biosynthesis III
THEOS_RS06645	PWY-4981	L-proline biosynthesis II (from arginine)
THEOS_RS06645	PWY-6344	L-ornithine degradation II (Stickland reaction)
THEOS_RS06650	PWY-6825	phosphatidylcholine biosynthesis V
THEOS_RS06680	PWY-2201	folate transformations I
THEOS_RS06680	PWY-3841	folate transformations II
THEOS_RS06685	PWY-5381	pyridine nucleotide cycling (plants)
THEOS_RS06720	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS06720	PWY-5686	UMP biosynthesis
THEOS_RS06720	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THEOS_RS06730	PWY-6829	tRNA methylation (yeast)
THEOS_RS06740	PWY-5155	&beta;-alanine biosynthesis III
THEOS_RS06800	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THEOS_RS06800	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THEOS_RS06810	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THEOS_RS06830	PWY-3821	galactose degradation III
THEOS_RS06830	PWY-6317	galactose degradation I (Leloir pathway)
THEOS_RS06830	PWY-6527	stachyose degradation
THEOS_RS06845	PWY-1881	formate oxidation to CO<sub>2</sub>
THEOS_RS06845	PWY-5497	purine nucleobases degradation II (anaerobic)
THEOS_RS06845	PWY-6696	oxalate degradation III
THEOS_RS06875	PWY-4983	L-citrulline-nitric oxide cycle
THEOS_RS06875	PWY-4984	urea cycle
THEOS_RS06875	PWY-5	canavanine biosynthesis
THEOS_RS06875	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS06875	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THEOS_RS06915	PWY-6832	2-aminoethylphosphonate degradation II
THEOS_RS06935	PWY-7193	pyrimidine ribonucleosides salvage I
THEOS_RS06960	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
THEOS_RS06965	PWY-2781	<i>cis</i>-zeatin biosynthesis
THEOS_RS06975	PWY-7199	pyrimidine deoxyribonucleosides salvage
THEOS_RS07025	PWY-2941	L-lysine biosynthesis II
THEOS_RS07025	PWY-2942	L-lysine biosynthesis III
THEOS_RS07025	PWY-5097	L-lysine biosynthesis VI
THEOS_RS07035	PWY-6556	pyrimidine ribonucleosides salvage II
THEOS_RS07035	PWY-7181	pyrimidine deoxyribonucleosides degradation
THEOS_RS07035	PWY-7193	pyrimidine ribonucleosides salvage I
THEOS_RS07035	PWY-7199	pyrimidine deoxyribonucleosides salvage
THEOS_RS07090	PWY-1042	glycolysis IV (plant cytosol)
THEOS_RS07090	PWY-1622	formaldehyde assimilation I (serine pathway)
THEOS_RS07090	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THEOS_RS07090	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS07090	PWY-5723	Rubisco shunt
THEOS_RS07090	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THEOS_RS07090	PWY-6886	1-butanol autotrophic biosynthesis
THEOS_RS07090	PWY-6901	superpathway of glucose and xylose degradation
THEOS_RS07090	PWY-7003	glycerol degradation to butanol
THEOS_RS07090	PWY-7124	ethylene biosynthesis V (engineered)
THEOS_RS07090	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THEOS_RS07180	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
THEOS_RS07220	PWY-6857	retinol biosynthesis
THEOS_RS07270	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
THEOS_RS07280	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THEOS_RS07285	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THEOS_RS07285	PWY-5723	Rubisco shunt
THEOS_RS07380	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
THEOS_RS07380	PWY-2201	folate transformations I
THEOS_RS07380	PWY-3841	folate transformations II
THEOS_RS07380	PWY-5030	L-histidine degradation III
THEOS_RS07380	PWY-5497	purine nucleobases degradation II (anaerobic)
THEOS_RS07380	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
THEOS_RS07420	PWY-40	putrescine biosynthesis I
THEOS_RS07420	PWY-6305	putrescine biosynthesis IV
THEOS_RS07440	PWY-3781	aerobic respiration I (cytochrome c)
THEOS_RS07440	PWY-4521	arsenite oxidation I (respiratory)
THEOS_RS07440	PWY-6692	Fe(II) oxidation
THEOS_RS07440	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THEOS_RS07445	PWY-3781	aerobic respiration I (cytochrome c)
THEOS_RS07445	PWY-4521	arsenite oxidation I (respiratory)
THEOS_RS07445	PWY-6692	Fe(II) oxidation
THEOS_RS07445	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THEOS_RS07450	PWY-3781	aerobic respiration I (cytochrome c)
THEOS_RS07450	PWY-4521	arsenite oxidation I (respiratory)
THEOS_RS07450	PWY-6692	Fe(II) oxidation
THEOS_RS07450	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THEOS_RS07520	PWY-4381	fatty acid biosynthesis initiation I
THEOS_RS07520	PWY-5743	3-hydroxypropanoate cycle
THEOS_RS07520	PWY-5744	glyoxylate assimilation
THEOS_RS07520	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THEOS_RS07520	PWY-6679	jadomycin biosynthesis
THEOS_RS07520	PWY-6722	candicidin biosynthesis
THEOS_RS07520	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THEOS_RS07605	PWY-1361	benzoyl-CoA degradation I (aerobic)
THEOS_RS07605	PWY-5109	2-methylbutanoate biosynthesis
THEOS_RS07605	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
THEOS_RS07605	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
THEOS_RS07605	PWY-5177	glutaryl-CoA degradation
THEOS_RS07605	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THEOS_RS07605	PWY-6435	4-hydroxybenzoate biosynthesis V
THEOS_RS07605	PWY-6583	pyruvate fermentation to butanol I
THEOS_RS07605	PWY-6863	pyruvate fermentation to hexanol
THEOS_RS07605	PWY-6883	pyruvate fermentation to butanol II
THEOS_RS07605	PWY-6944	androstenedione degradation
THEOS_RS07605	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
THEOS_RS07605	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
THEOS_RS07605	PWY-7007	methyl ketone biosynthesis
THEOS_RS07605	PWY-7046	4-coumarate degradation (anaerobic)
THEOS_RS07605	PWY-7094	fatty acid salvage
THEOS_RS07605	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
THEOS_RS07605	PWY-735	jasmonic acid biosynthesis
THEOS_RS07605	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
THEOS_RS07605	PWY-7606	docosahexaenoate biosynthesis III (mammals)
THEOS_RS07605	PWY-7726	THEOS_RS07605
THEOS_RS07645	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THEOS_RS07645	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THEOS_RS07645	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THEOS_RS07645	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THEOS_RS07645	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THEOS_RS07645	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THEOS_RS07645	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THEOS_RS07645	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THEOS_RS07675	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
THEOS_RS07675	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
THEOS_RS07675	PWY-7622	UDP-galactofuranose biosynthesis
THEOS_RS07715	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
THEOS_RS07720	PWY-1042	glycolysis IV (plant cytosol)
THEOS_RS07720	PWY-1622	formaldehyde assimilation I (serine pathway)
THEOS_RS07720	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THEOS_RS07720	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS07720	PWY-5723	Rubisco shunt
THEOS_RS07720	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
THEOS_RS07720	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THEOS_RS07720	PWY-6886	1-butanol autotrophic biosynthesis
THEOS_RS07720	PWY-6901	superpathway of glucose and xylose degradation
THEOS_RS07720	PWY-7003	glycerol degradation to butanol
THEOS_RS07720	PWY-7124	ethylene biosynthesis V (engineered)
THEOS_RS07720	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THEOS_RS07740	PWY-3461	L-tyrosine biosynthesis II
THEOS_RS07740	PWY-3462	L-phenylalanine biosynthesis II
THEOS_RS07740	PWY-6120	L-tyrosine biosynthesis III
THEOS_RS07740	PWY-6627	salinosporamide A biosynthesis
THEOS_RS07740	PWY-7626	bacilysin biosynthesis
THEOS_RS07745	PWY-6853	ethylene biosynthesis II (microbes)
THEOS_RS07750	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
THEOS_RS07750	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THEOS_RS07780	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THEOS_RS07780	PWY-6578	8-amino-7-oxononanoate biosynthesis III
THEOS_RS07780	PWY-7147	8-amino-7-oxononanoate biosynthesis II
THEOS_RS07855	PWY-5741	ethylmalonyl-CoA pathway
THEOS_RS07855	PWY-5743	3-hydroxypropanoate cycle
THEOS_RS07855	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THEOS_RS07855	PWY-6728	methylaspartate cycle
THEOS_RS07855	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THEOS_RS07870	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THEOS_RS07870	PWY-3461	L-tyrosine biosynthesis II
THEOS_RS07870	PWY-3462	L-phenylalanine biosynthesis II
THEOS_RS07870	PWY-6120	L-tyrosine biosynthesis III
THEOS_RS07870	PWY-6164	3-dehydroquinate biosynthesis I
THEOS_RS07870	PWY-6627	salinosporamide A biosynthesis
THEOS_RS07870	PWY-7626	bacilysin biosynthesis
THEOS_RS07870	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THEOS_RS07885	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THEOS_RS07885	PWY-5667	CDP-diacylglycerol biosynthesis I
THEOS_RS07885	PWY-6453	stigma estolide biosynthesis
THEOS_RS07885	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
THEOS_RS07885	PWY-7587	oleate biosynthesis III (cyanobacteria)
THEOS_RS07920	PWY-6938	NADH repair
THEOS_RS07925	PWY-702	L-methionine biosynthesis II
THEOS_RS08010	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
THEOS_RS08075	PWY-6898	thiamin salvage III
THEOS_RS08075	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
THEOS_RS08075	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
THEOS_RS08075	PWY-7356	thiamin salvage IV (yeast)
THEOS_RS08090	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THEOS_RS08090	PWY-6596	adenosine nucleotides degradation I
THEOS_RS08090	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THEOS_RS08150	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS08155	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THEOS_RS08155	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THEOS_RS08155	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THEOS_RS08155	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THEOS_RS08155	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THEOS_RS08155	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THEOS_RS08155	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THEOS_RS08155	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THEOS_RS08185	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
THEOS_RS08185	PWY-5368	dimorphecolate biosynthesis
THEOS_RS08185	PWY-5995	linoleate biosynthesis I (plants)
THEOS_RS08185	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
THEOS_RS08185	PWY-6803	phosphatidylcholine acyl editing
THEOS_RS08185	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
THEOS_RS08185	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
THEOS_RS08185	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
THEOS_RS08185	PWY-7470	phosphatidylcholine biosynthesis VII
THEOS_RS08185	PWY-7618	ricinoleate biosynthesis
THEOS_RS08220	PWY-3781	aerobic respiration I (cytochrome c)
THEOS_RS08220	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THEOS_RS08220	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THEOS_RS08220	PWY-5690	TCA cycle II (plants and fungi)
THEOS_RS08220	PWY-6728	methylaspartate cycle
THEOS_RS08220	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THEOS_RS08220	PWY-7254	TCA cycle VII (acetate-producers)
THEOS_RS08220	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THEOS_RS08225	PWY-3781	aerobic respiration I (cytochrome c)
THEOS_RS08225	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THEOS_RS08225	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THEOS_RS08225	PWY-5690	TCA cycle II (plants and fungi)
THEOS_RS08225	PWY-6728	methylaspartate cycle
THEOS_RS08225	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THEOS_RS08225	PWY-7254	TCA cycle VII (acetate-producers)
THEOS_RS08225	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THEOS_RS08240	PWY-6834	spermidine biosynthesis III
THEOS_RS08285	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
THEOS_RS08285	PWY-7177	UTP and CTP dephosphorylation II
THEOS_RS08285	PWY-7185	UTP and CTP dephosphorylation I
THEOS_RS08330	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THEOS_RS08330	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THEOS_RS08330	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THEOS_RS08330	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
THEOS_RS08330	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THEOS_RS08330	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THEOS_RS08440	PWY-5913	TCA cycle VI (obligate autotrophs)
THEOS_RS08440	PWY-6549	L-glutamine biosynthesis III
THEOS_RS08440	PWY-6728	methylaspartate cycle
THEOS_RS08440	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THEOS_RS08440	PWY-7124	ethylene biosynthesis V (engineered)
THEOS_RS08440	PWY-7254	TCA cycle VII (acetate-producers)
THEOS_RS08440	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THEOS_RS08530	PWY-723	alkylnitronates degradation
THEOS_RS08575	PWY-1042	glycolysis IV (plant cytosol)
THEOS_RS08575	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THEOS_RS08575	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS08575	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THEOS_RS08575	PWY-7385	1,3-propanediol biosynthesis (engineered)
THEOS_RS08580	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THEOS_RS08580	PWY-5723	Rubisco shunt
THEOS_RS08585	PWY-5723	Rubisco shunt
THEOS_RS08595	PWY-5532	adenosine nucleotides degradation IV
THEOS_RS08595	PWY-5723	Rubisco shunt
THEOS_RS08600	PWY-5532	adenosine nucleotides degradation IV
THEOS_RS08600	PWY-5723	Rubisco shunt
THEOS_RS08605	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS08650	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THEOS_RS08650	PWY-5723	Rubisco shunt
THEOS_RS08650	PWY-6891	thiazole biosynthesis II (Bacillus)
THEOS_RS08650	PWY-6892	thiazole biosynthesis I (E. coli)
THEOS_RS08650	PWY-6901	superpathway of glucose and xylose degradation
THEOS_RS08650	PWY-7560	methylerythritol phosphate pathway II
THEOS_RS08665	PWY-6823	molybdenum cofactor biosynthesis
THEOS_RS08700	PWY-1042	glycolysis IV (plant cytosol)
THEOS_RS08700	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THEOS_RS08700	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS08700	PWY-5723	Rubisco shunt
THEOS_RS08700	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THEOS_RS08700	PWY-6886	1-butanol autotrophic biosynthesis
THEOS_RS08700	PWY-6901	superpathway of glucose and xylose degradation
THEOS_RS08700	PWY-7003	glycerol degradation to butanol
THEOS_RS08700	PWY-7124	ethylene biosynthesis V (engineered)
THEOS_RS08700	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THEOS_RS08725	PWY-7205	CMP phosphorylation
THEOS_RS08730	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THEOS_RS08735	PWY-6823	molybdenum cofactor biosynthesis
THEOS_RS08735	PWY-6891	thiazole biosynthesis II (Bacillus)
THEOS_RS08735	PWY-6892	thiazole biosynthesis I (E. coli)
THEOS_RS08735	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
THEOS_RS08820	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THEOS_RS08915	PWY-6728	methylaspartate cycle
THEOS_RS08915	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THEOS_RS08915	PWY-7118	chitin degradation to ethanol
THEOS_RS08915	PWY-7294	xylose degradation IV
THEOS_RS08915	PWY-7295	L-arabinose degradation IV
THEOS_RS09010	PWY-6700	queuosine biosynthesis
THEOS_RS09100	PWY-101	photosynthesis light reactions
THEOS_RS09100	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
THEOS_RS09245	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
THEOS_RS09290	PWY-622	starch biosynthesis
THEOS_RS09310	PWY-622	starch biosynthesis
THEOS_RS09350	PWY-6823	molybdenum cofactor biosynthesis
THEOS_RS09400	PWY-7560	methylerythritol phosphate pathway II
THEOS_RS09520	PWY-2201	folate transformations I
THEOS_RS09560	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THEOS_RS09560	PWY-622	starch biosynthesis
THEOS_RS09565	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS09565	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THEOS_RS09570	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS09570	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THEOS_RS09610	PWY-3081	L-lysine biosynthesis V
THEOS_RS09610	PWY-6871	3-methylbutanol biosynthesis
THEOS_RS09610	PWY-7710	THEOS_RS09610
THEOS_RS09695	PWY-2201	folate transformations I
THEOS_RS09695	PWY-3841	folate transformations II
THEOS_RS09740	PWY-6167	flavin biosynthesis II (archaea)
THEOS_RS09740	PWY-6168	flavin biosynthesis III (fungi)
THEOS_RS09775	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THEOS_RS09775	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THEOS_RS09775	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THEOS_RS09845	PWY-5839	menaquinol-7 biosynthesis
THEOS_RS09845	PWY-5844	menaquinol-9 biosynthesis
THEOS_RS09845	PWY-5849	menaquinol-6 biosynthesis
THEOS_RS09845	PWY-5890	menaquinol-10 biosynthesis
THEOS_RS09845	PWY-5891	menaquinol-11 biosynthesis
THEOS_RS09845	PWY-5892	menaquinol-12 biosynthesis
THEOS_RS09845	PWY-5895	menaquinol-13 biosynthesis
THEOS_RS09870	PWY-5958	acridone alkaloid biosynthesis
THEOS_RS09870	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THEOS_RS09870	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THEOS_RS09875	PWY-5958	acridone alkaloid biosynthesis
THEOS_RS09875	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THEOS_RS09875	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THEOS_RS09900	PWY-6891	thiazole biosynthesis II (Bacillus)
THEOS_RS09900	PWY-6892	thiazole biosynthesis I (E. coli)
THEOS_RS09900	PWY-7560	methylerythritol phosphate pathway II
THEOS_RS09970	PWY-6004	glycine betaine biosynthesis V (from glycine)
THEOS_RS09995	PWY-6823	molybdenum cofactor biosynthesis
THEOS_RS10010	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THEOS_RS10025	PWY-7158	L-phenylalanine degradation V
THEOS_RS10045	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THEOS_RS10045	PWY-6148	tetrahydromethanopterin biosynthesis
THEOS_RS10045	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THEOS_RS10045	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THEOS_RS10090	PWY-3341	L-proline biosynthesis III
THEOS_RS10090	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THEOS_RS10095	PWY-3341	L-proline biosynthesis III
THEOS_RS10095	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THEOS_RS10115	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
THEOS_RS10115	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
THEOS_RS10115	PWY-6268	adenosylcobalamin salvage from cobalamin
THEOS_RS10115	PWY-6269	adenosylcobalamin salvage from cobinamide II
THEOS_RS10255	PWY-7560	methylerythritol phosphate pathway II
THEOS_RS10260	PWY-7560	methylerythritol phosphate pathway II
THEOS_RS10265	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
THEOS_RS10270	PWY-6832	2-aminoethylphosphonate degradation II
THEOS_RS10360	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THEOS_RS10360	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
THEOS_RS10365	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THEOS_RS10365	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
THEOS_RS10380	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
THEOS_RS10380	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THEOS_RS10410	PWY-6825	phosphatidylcholine biosynthesis V
THEOS_RS10445	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THEOS_RS10460	PWY-6599	guanine and guanosine salvage II
THEOS_RS10460	PWY-6609	adenine and adenosine salvage III
THEOS_RS10460	PWY-6610	adenine and adenosine salvage IV
THEOS_RS10460	PWY-6620	guanine and guanosine salvage
THEOS_RS10615	PWY-6614	tetrahydrofolate biosynthesis
THEOS_RS10620	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THEOS_RS10620	PWY-6148	tetrahydromethanopterin biosynthesis
THEOS_RS10620	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THEOS_RS10620	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THEOS_RS10645	PWY-3121	linamarin degradation
THEOS_RS10645	PWY-5176	coumarin biosynthesis (via 2-coumarate)
THEOS_RS10645	PWY-6002	lotaustralin degradation
THEOS_RS10645	PWY-6788	cellulose degradation II (fungi)
THEOS_RS10645	PWY-7089	taxiphyllin bioactivation
THEOS_RS10645	PWY-7091	linustatin bioactivation
THEOS_RS10645	PWY-7092	neolinustatin bioactivation
THEOS_RS10685	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THEOS_RS10685	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
THEOS_RS10685	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THEOS_RS10685	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THEOS_RS10685	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
THEOS_RS10685	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THEOS_RS10685	PWY-7205	CMP phosphorylation
THEOS_RS10685	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THEOS_RS10685	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THEOS_RS10685	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THEOS_RS10685	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THEOS_RS10685	PWY-7224	purine deoxyribonucleosides salvage
THEOS_RS10685	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THEOS_RS10685	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THEOS_RS10700	PWY-6891	thiazole biosynthesis II (Bacillus)
THEOS_RS10700	PWY-6892	thiazole biosynthesis I (E. coli)
THEOS_RS10700	PWY-7560	methylerythritol phosphate pathway II
THEOS_RS10725	PWY-6749	CMP-legionaminate biosynthesis I
THEOS_RS10785	PWY-6936	seleno-amino acid biosynthesis
THEOS_RS10800	PWY-5381	pyridine nucleotide cycling (plants)
THEOS_RS10800	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THEOS_RS10800	PWY-6596	adenosine nucleotides degradation I
THEOS_RS10800	PWY-6606	guanosine nucleotides degradation II
THEOS_RS10800	PWY-6607	guanosine nucleotides degradation I
THEOS_RS10800	PWY-6608	guanosine nucleotides degradation III
THEOS_RS10800	PWY-7185	UTP and CTP dephosphorylation I
THEOS_RS10830	PWY-2161	folate polyglutamylation
THEOS_RS10840	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THEOS_RS10840	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THEOS_RS10880	PWY-1042	glycolysis IV (plant cytosol)
THEOS_RS10880	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THEOS_RS10880	PWY-5484	glycolysis II (from fructose 6-phosphate)
THEOS_RS10880	PWY-7385	1,3-propanediol biosynthesis (engineered)
THEOS_RS10885	PWY-2201	folate transformations I
THEOS_RS11470	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THEOS_RS11470	PWY-5686	UMP biosynthesis
THEOS_RS11470	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THEOS_RS11745	PWY-6749	CMP-legionaminate biosynthesis I
THEOS_RS11930	PWY-6700	queuosine biosynthesis
THEOS_RS12470	PWY-5392	reductive TCA cycle II
THEOS_RS12470	PWY-5537	pyruvate fermentation to acetate V
THEOS_RS12470	PWY-5538	pyruvate fermentation to acetate VI
THEOS_RS12470	PWY-5690	TCA cycle II (plants and fungi)
THEOS_RS12470	PWY-5913	TCA cycle VI (obligate autotrophs)
THEOS_RS12470	PWY-6728	methylaspartate cycle
THEOS_RS12470	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THEOS_RS12470	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THEOS_RS12510	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THEOS_RS12510	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THEOS_RS12545	PWY-3781	aerobic respiration I (cytochrome c)
THEOS_RS12545	PWY-4521	arsenite oxidation I (respiratory)
THEOS_RS12545	PWY-6692	Fe(II) oxidation
THEOS_RS12545	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
