THEOS_RS00010	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS00010	SM00760	Bacterial dnaA protein helix-turn-helix domain
THEOS_RS00015	SM00480	DNA polymerase III beta subunit
THEOS_RS00020	SM01192	THEOS_RS00020
THEOS_RS00020	SM01193	THEOS_RS00020
THEOS_RS00035	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
THEOS_RS00075	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS00125	SM00937	THEOS_RS00125
THEOS_RS00145	SM00883	Chaperonin 10 Kd subunit
THEOS_RS00155	SM00881	CoA binding domain
THEOS_RS00245	SM00943	Bifunctional DNA primase/polymerase, N-terminal
THEOS_RS00280	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THEOS_RS00280	SM00954	Region found in RelA / SpoT proteins
THEOS_RS00320	SM00448	cheY-homologous receiver domain
THEOS_RS00320	SM00862	Transcriptional regulatory protein, C terminal
THEOS_RS00325	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THEOS_RS00325	SM00387	Histidine kinase-like ATPases
THEOS_RS00325	SM00388	His Kinase A (phosphoacceptor) domain
THEOS_RS00485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THEOS_RS00485	SM00387	Histidine kinase-like ATPases
THEOS_RS00485	SM00388	His Kinase A (phosphoacceptor) domain
THEOS_RS00490	SM00448	cheY-homologous receiver domain
THEOS_RS00490	SM00862	Transcriptional regulatory protein, C terminal
THEOS_RS00525	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS00605	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
THEOS_RS00615	SM00732	Likely ribonuclease with RNase H fold.
THEOS_RS00640	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
THEOS_RS00680	SM00861	Transketolase, pyrimidine binding domain
THEOS_RS00690	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THEOS_RS00715	SM00967	RNA 2'-O ribose methyltransferase substrate binding
THEOS_RS00790	SM00838	Elongation factor G C-terminus
THEOS_RS00800	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS00835	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS00855	SM00487	DEAD-like helicases superfamily
THEOS_RS00855	SM00490	helicase superfamily c-terminal domain
THEOS_RS00875	SM00448	cheY-homologous receiver domain
THEOS_RS00875	SM00862	Transcriptional regulatory protein, C terminal
THEOS_RS00880	SM00387	Histidine kinase-like ATPases
THEOS_RS00905	SM00852	Probable molybdopterin binding domain
THEOS_RS00915	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS00920	SM00322	K homology RNA-binding domain
THEOS_RS00920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THEOS_RS00945	SM00663	RNA polymerase I subunit A N-terminus
THEOS_RS00950	SM01007	Class II Aldolase and Adducin N-terminal domain
THEOS_RS01120	SM00937	THEOS_RS01120
THEOS_RS01140	SM00564	beta-propeller repeat
THEOS_RS01175	SM00506	Appr-1"-p processing enzyme
THEOS_RS01240	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THEOS_RS01240	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THEOS_RS01260	SM00981	THEOS_RS01260
THEOS_RS01295	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THEOS_RS01335	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
THEOS_RS01375	SM00838	Elongation factor G C-terminus
THEOS_RS01375	SM00889	Elongation factor G, domain IV
THEOS_RS01385	SM01403	THEOS_RS01385
THEOS_RS01405	SM01382	THEOS_RS01405
THEOS_RS01405	SM01383	THEOS_RS01405
THEOS_RS01420	SM00322	K homology RNA-binding domain
THEOS_RS01440	SM01374	THEOS_RS01440
THEOS_RS01445	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
THEOS_RS01525	SM00363	S4 RNA-binding domain
THEOS_RS01525	SM01390	THEOS_RS01525
THEOS_RS01530	SM00662	RNA polymerases D
THEOS_RS01550	SM00507	HNH nucleases
THEOS_RS01555	SM00028	Tetratricopeptide repeats
THEOS_RS01565	SM00881	CoA binding domain
THEOS_RS01600	SM00642	Alpha-amylase domain
THEOS_RS01610	SM00998	Adenylosuccinate lyase C-terminus
THEOS_RS01625	SM01211	THEOS_RS01625
THEOS_RS01660	SM00966	SpoVT / AbrB like domain 
THEOS_RS01665	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS01695	SM00960	Roadblock/LC7 domain
THEOS_RS01700	SM00960	Roadblock/LC7 domain
THEOS_RS01710	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THEOS_RS01710	SM00493	THEOS_RS01710
THEOS_RS01720	SM01004	Delta-aminolevulinic acid dehydratase
THEOS_RS01735	SM00331	Sigma factor PP2C-like phosphatases
THEOS_RS01735	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
THEOS_RS01740	SM00220	Serine/Threonine protein kinases, catalytic domain
THEOS_RS01745	SM00448	cheY-homologous receiver domain
THEOS_RS01745	SM00862	Transcriptional regulatory protein, C terminal
THEOS_RS01750	SM00387	Histidine kinase-like ATPases
THEOS_RS01750	SM00388	His Kinase A (phosphoacceptor) domain
THEOS_RS01810	SM00729	Elongator protein 3, MiaB family, Radical SAM
THEOS_RS01815	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
THEOS_RS01815	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
THEOS_RS01835	SM00838	Elongation factor G C-terminus
THEOS_RS01835	SM00889	Elongation factor G, domain IV
THEOS_RS01840	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS01855	SM00448	cheY-homologous receiver domain
THEOS_RS01855	SM00862	Transcriptional regulatory protein, C terminal
THEOS_RS01860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THEOS_RS01860	SM00387	Histidine kinase-like ATPases
THEOS_RS01860	SM00388	His Kinase A (phosphoacceptor) domain
THEOS_RS01910	SM00867	YceI-like domain 
THEOS_RS01920	SM00267	diguanylate cyclase
THEOS_RS01940	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
THEOS_RS01945	SM00463	Small MutS-related domain
THEOS_RS01945	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
THEOS_RS01945	SM00534	ATPase domain of DNA mismatch repair MUTS family
THEOS_RS01965	SM01400	THEOS_RS01965
THEOS_RS02000	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS02035	SM00849	Metallo-beta-lactamase superfamily
THEOS_RS02040	SM00450	Rhodanese Homology Domain
THEOS_RS02065	SM00448	cheY-homologous receiver domain
THEOS_RS02065	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THEOS_RS02070	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
THEOS_RS02070	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
THEOS_RS02070	SM00493	THEOS_RS02070
THEOS_RS02085	SM00363	S4 RNA-binding domain
THEOS_RS02090	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
THEOS_RS02105	SM00740	THEOS_RS02105
THEOS_RS02135	SM00563	Phosphate acyltransferases
THEOS_RS02195	SM01329	THEOS_RS02195
THEOS_RS02205	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THEOS_RS02240	SM00646	THEOS_RS02240
THEOS_RS02245	SM00220	Serine/Threonine protein kinases, catalytic domain
THEOS_RS02375	SM00387	Histidine kinase-like ATPases
THEOS_RS02375	SM00388	His Kinase A (phosphoacceptor) domain
THEOS_RS02380	SM00448	cheY-homologous receiver domain
THEOS_RS02380	SM00862	Transcriptional regulatory protein, C terminal
THEOS_RS02395	SM00419	helix_turn_helix, cAMP Regulatory protein
THEOS_RS02410	SM00434	DNA Topoisomerase IV
THEOS_RS02420	SM00257	Lysin motif
THEOS_RS02430	SM00421	helix_turn_helix, Lux Regulon
THEOS_RS02430	SM00448	cheY-homologous receiver domain
THEOS_RS02445	SM00411	bacterial (prokaryotic) histone like domain
THEOS_RS02450	SM00563	Phosphate acyltransferases
THEOS_RS02480	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS02485	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS02515	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS02520	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS02540	SM01230	THEOS_RS02540
THEOS_RS02565	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
THEOS_RS02565	SM00534	ATPase domain of DNA mismatch repair MUTS family
THEOS_RS02570	SM00853	MutL C terminal dimerisation domain
THEOS_RS02570	SM01340	THEOS_RS02570
THEOS_RS02585	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THEOS_RS02635	SM00729	Elongator protein 3, MiaB family, Radical SAM
THEOS_RS02640	SM00704	CDGSH-type zinc finger. Function unknown.
THEOS_RS02645	SM00729	Elongator protein 3, MiaB family, Radical SAM
THEOS_RS02700	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS02700	SM00464	Found in ATP-dependent protease La (LON)
THEOS_RS02760	SM00966	SpoVT / AbrB like domain 
THEOS_RS02835	SM00267	diguanylate cyclase
THEOS_RS02855	SM00867	YceI-like domain 
THEOS_RS02865	SM00729	Elongator protein 3, MiaB family, Radical SAM
THEOS_RS02880	SM00354	helix_turn _helix lactose operon repressor
THEOS_RS02885	SM01207	THEOS_RS02885
THEOS_RS02895	SM00849	Metallo-beta-lactamase superfamily
THEOS_RS02905	SM01209	THEOS_RS02905
THEOS_RS02905	SM01210	THEOS_RS02905
THEOS_RS02910	SM00479	THEOS_RS02910
THEOS_RS02915	SM00448	cheY-homologous receiver domain
THEOS_RS02920	SM00387	Histidine kinase-like ATPases
THEOS_RS02920	SM00388	His Kinase A (phosphoacceptor) domain
THEOS_RS02925	SM00100	Cyclic nucleotide-monophosphate binding domain
THEOS_RS02925	SM00116	Domain in cystathionine beta-synthase and other proteins.
THEOS_RS02970	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS02970	SM00843	THEOS_RS02970
THEOS_RS02975	SM00935	Outer membrane protein (OmpH-like)
THEOS_RS02985	SM00116	Domain in cystathionine beta-synthase and other proteins.
THEOS_RS02995	SM00448	cheY-homologous receiver domain
THEOS_RS03030	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS03040	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THEOS_RS03040	SM00292	breast cancer carboxy-terminal domain
THEOS_RS03040	SM00532	Ligase N family
THEOS_RS03095	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
THEOS_RS03100	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
THEOS_RS03125	SM00028	Tetratricopeptide repeats
THEOS_RS03135	SM00100	Cyclic nucleotide-monophosphate binding domain
THEOS_RS03135	SM00419	helix_turn_helix, cAMP Regulatory protein
THEOS_RS03155	SM00642	Alpha-amylase domain
THEOS_RS03160	SM00072	Guanylate kinase homologues.
THEOS_RS03165	SM01409	THEOS_RS03165
THEOS_RS03235	SM01400	THEOS_RS03235
THEOS_RS03255	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS03260	SM00028	Tetratricopeptide repeats
THEOS_RS03270	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS03280	SM00363	S4 RNA-binding domain
THEOS_RS03300	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THEOS_RS03305	SM00825	Beta-ketoacyl synthase
THEOS_RS03315	SM00822	THEOS_RS03315
THEOS_RS03320	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
THEOS_RS03365	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS03380	SM00271	DnaJ molecular chaperone homology domain
THEOS_RS03390	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS03390	SM01086	C-terminal, D2-small domain, of ClpB protein
THEOS_RS03455	SM00116	Domain in cystathionine beta-synthase and other proteins.
THEOS_RS03510	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
THEOS_RS03510	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
THEOS_RS03515	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
THEOS_RS03545	SM00650	Ribosomal RNA adenine dimethylases
THEOS_RS03570	SM00903	Flavin reductase like domain
THEOS_RS03580	SM00028	Tetratricopeptide repeats
THEOS_RS03635	SM01001	AIR carboxylase
THEOS_RS03665	SM00919	Malic enzyme, NAD binding domain
THEOS_RS03665	SM01274	THEOS_RS03665
THEOS_RS03700	SM00450	Rhodanese Homology Domain
THEOS_RS03715	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
THEOS_RS03725	SM00421	helix_turn_helix, Lux Regulon
THEOS_RS03725	SM00448	cheY-homologous receiver domain
THEOS_RS03730	SM00387	Histidine kinase-like ATPases
THEOS_RS03735	SM00904	Riboflavin kinase
THEOS_RS03785	SM00881	CoA binding domain
THEOS_RS03795	SM00670	Large family of predicted nucleotide-binding domains
THEOS_RS03800	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS03805	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS03805	SM01086	C-terminal, D2-small domain, of ClpB protein
THEOS_RS03815	SM00859	Semialdehyde dehydrogenase, NAD binding domain
THEOS_RS03820	SM00363	S4 RNA-binding domain
THEOS_RS03865	SM01207	THEOS_RS03865
THEOS_RS03945	SM00829	Enoylreductase
THEOS_RS04015	SM00220	Serine/Threonine protein kinases, catalytic domain
THEOS_RS04020	SM00849	Metallo-beta-lactamase superfamily
THEOS_RS04185	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS04230	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS04280	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THEOS_RS04280	SM00245	tail specific protease
THEOS_RS04285	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS04310	SM00450	Rhodanese Homology Domain
THEOS_RS04315	SM00450	Rhodanese Homology Domain
THEOS_RS04315	SM00849	Metallo-beta-lactamase superfamily
THEOS_RS04325	SM00450	Rhodanese Homology Domain
THEOS_RS04345	SM00763	PrkA AAA domain
THEOS_RS04355	SM00849	Metallo-beta-lactamase superfamily
THEOS_RS04390	SM00854	Bacterial capsule synthesis protein PGA_cap
THEOS_RS04420	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
THEOS_RS04420	SM00475	5'-3' exonuclease
THEOS_RS04420	SM00482	DNA polymerase A domain
THEOS_RS04435	SM00421	helix_turn_helix, Lux Regulon
THEOS_RS04470	SM00116	Domain in cystathionine beta-synthase and other proteins.
THEOS_RS04470	SM00924	MgtE intracellular N domain
THEOS_RS04475	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS04475	SM00962	SRP54-type protein, GTPase domain
THEOS_RS04475	SM00963	SRP54-type protein, helical bundle domain
THEOS_RS04505	SM00421	helix_turn_helix, Lux Regulon
THEOS_RS04505	SM00448	cheY-homologous receiver domain
THEOS_RS04515	SM00450	Rhodanese Homology Domain
THEOS_RS04540	SM00968	SMC proteins Flexible Hinge Domain
THEOS_RS04545	SM00909	Sporulation and spore germination
THEOS_RS04575	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
THEOS_RS04610	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THEOS_RS04620	SM01207	THEOS_RS04620
THEOS_RS04655	SM01101	THEOS_RS04655
THEOS_RS04690	SM00798	AICARFT/IMPCHase bienzyme
THEOS_RS04690	SM00851	MGS-like domain
THEOS_RS04725	SM00861	Transketolase, pyrimidine binding domain
THEOS_RS04760	SM00052	Putative diguanylate phosphodiesterase
THEOS_RS04760	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THEOS_RS04760	SM00091	PAS domain
THEOS_RS04760	SM00267	diguanylate cyclase
THEOS_RS04790	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
THEOS_RS04815	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS04830	SM01130	THEOS_RS04830
THEOS_RS04850	SM00903	Flavin reductase like domain
THEOS_RS04870	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS04875	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS04895	SM00347	helix_turn_helix multiple antibiotic resistance protein
THEOS_RS04905	SM00796	Allophanate hydrolase subunit 1
THEOS_RS04905	SM00797	Allophanate hydrolase subunit 2
THEOS_RS04990	SM00028	Tetratricopeptide repeats
THEOS_RS05055	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
THEOS_RS05075	SM00487	DEAD-like helicases superfamily
THEOS_RS05075	SM00490	helicase superfamily c-terminal domain
THEOS_RS05085	SM00487	DEAD-like helicases superfamily
THEOS_RS05085	SM00490	helicase superfamily c-terminal domain
THEOS_RS05100	SM00267	diguanylate cyclase
THEOS_RS05110	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THEOS_RS05110	SM00267	diguanylate cyclase
THEOS_RS05115	SM00052	Putative diguanylate phosphodiesterase
THEOS_RS05115	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THEOS_RS05115	SM00267	diguanylate cyclase
THEOS_RS05120	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THEOS_RS05120	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THEOS_RS05120	SM00091	PAS domain
THEOS_RS05120	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THEOS_RS05160	SM00947	Carbonic anhydrase
THEOS_RS05190	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
THEOS_RS05200	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THEOS_RS05200	SM01043	Bacterial transcriptional activator domain
THEOS_RS05205	SM00100	Cyclic nucleotide-monophosphate binding domain
THEOS_RS05205	SM00419	helix_turn_helix, cAMP Regulatory protein
THEOS_RS05210	SM00899	THEOS_RS05210
THEOS_RS05235	SM00729	Elongator protein 3, MiaB family, Radical SAM
THEOS_RS05295	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THEOS_RS05305	SM01007	Class II Aldolase and Adducin N-terminal domain
THEOS_RS05325	SM00327	von Willebrand factor (vWF) type A domain
THEOS_RS05330	SM00327	von Willebrand factor (vWF) type A domain
THEOS_RS05365	SM00822	THEOS_RS05365
THEOS_RS05375	SM00529	Helix-turn-helix diphteria tox regulatory element
THEOS_RS05375	SM00899	THEOS_RS05375
THEOS_RS05390	SM00822	THEOS_RS05390
THEOS_RS05400	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS05445	SM00829	Enoylreductase
THEOS_RS05475	SM00419	helix_turn_helix, cAMP Regulatory protein
THEOS_RS05525	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS05525	SM01086	C-terminal, D2-small domain, of ClpB protein
THEOS_RS05530	SM00028	Tetratricopeptide repeats
THEOS_RS05635	SM00842	Cell division protein FtsA
THEOS_RS05640	SM00864	Tubulin/FtsZ family, GTPase domain
THEOS_RS05640	SM00865	Tubulin/FtsZ family, C-terminal domain
THEOS_RS05705	SM00100	Cyclic nucleotide-monophosphate binding domain
THEOS_RS05705	SM00419	helix_turn_helix, cAMP Regulatory protein
THEOS_RS05710	SM00422	helix_turn_helix, mercury resistance
THEOS_RS05740	SM00563	Phosphate acyltransferases
THEOS_RS05800	SM00849	Metallo-beta-lactamase superfamily
THEOS_RS05805	SM00327	von Willebrand factor (vWF) type A domain
THEOS_RS05830	SM00316	Ribosomal protein S1-like RNA-binding domain
THEOS_RS05830	SM00322	K homology RNA-binding domain
THEOS_RS05925	SM00062	Bacterial periplasmic substrate-binding proteins
THEOS_RS05945	SM00729	Elongator protein 3, MiaB family, Radical SAM
THEOS_RS05950	SM00530	Helix-turn-helix XRE-family like proteins 
THEOS_RS05970	SM00226	Low molecular weight phosphatase family
THEOS_RS05975	SM00387	Histidine kinase-like ATPases
THEOS_RS06005	SM01133	THEOS_RS06005
THEOS_RS06010	SM00155	Phospholipase D. Active site motifs.
THEOS_RS06080	SM00859	Semialdehyde dehydrogenase, NAD binding domain
THEOS_RS06100	SM01207	THEOS_RS06100
THEOS_RS06110	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS06125	SM00917	LeuA allosteric (dimerisation) domain
THEOS_RS06130	SM00917	LeuA allosteric (dimerisation) domain
THEOS_RS06245	SM01329	THEOS_RS06245
THEOS_RS06260	SM00822	THEOS_RS06260
THEOS_RS06290	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS06345	SM00957	SecA DEAD-like domain
THEOS_RS06345	SM00958	SecA preprotein cross-linking domain
THEOS_RS06370	SM00487	DEAD-like helicases superfamily
THEOS_RS06370	SM00490	helicase superfamily c-terminal domain
THEOS_RS06385	SM00400	zinc finger
THEOS_RS06385	SM00493	THEOS_RS06385
THEOS_RS06415	SM00487	DEAD-like helicases superfamily
THEOS_RS06415	SM00490	helicase superfamily c-terminal domain
THEOS_RS06475	SM00530	Helix-turn-helix XRE-family like proteins 
THEOS_RS06630	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THEOS_RS06680	SM01018	B12 binding domain
THEOS_RS06690	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS06690	SM00994	ClpX C4-type zinc finger
THEOS_RS06690	SM01086	C-terminal, D2-small domain, of ClpB protein
THEOS_RS06720	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
THEOS_RS06785	SM00822	THEOS_RS06785
THEOS_RS06835	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
THEOS_RS06845	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
THEOS_RS06890	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS06895	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS06930	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS06955	SM00479	THEOS_RS06955
THEOS_RS07005	SM00838	Elongation factor G C-terminus
THEOS_RS07010	SM00387	Histidine kinase-like ATPases
THEOS_RS07010	SM00388	His Kinase A (phosphoacceptor) domain
THEOS_RS07025	SM01130	THEOS_RS07025
THEOS_RS07040	SM00116	Domain in cystathionine beta-synthase and other proteins.
THEOS_RS07040	SM01091	Transporter associated domain
THEOS_RS07045	SM00347	helix_turn_helix multiple antibiotic resistance protein
THEOS_RS07090	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
THEOS_RS07130	SM00986	Uracil DNA glycosylase superfamily
THEOS_RS07130	SM00987	UreE urease accessory protein, C-terminal domain 
THEOS_RS07145	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS07190	SM00867	YceI-like domain 
THEOS_RS07195	SM00903	Flavin reductase like domain
THEOS_RS07205	SM01021	Bacteriorhodopsin-like protein
THEOS_RS07265	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
THEOS_RS07275	SM00257	Lysin motif
THEOS_RS07280	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS07280	SM00959	Rho termination factor, N-terminal domain
THEOS_RS07305	SM00257	Lysin motif
THEOS_RS07310	SM00518	AP endonuclease family 2
THEOS_RS07340	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS07340	SM00464	Found in ATP-dependent protease La (LON)
THEOS_RS07395	SM00878	Biotin carboxylase C-terminal domain
THEOS_RS07395	SM01209	THEOS_RS07395
THEOS_RS07405	SM00841	Elongation factor P, C-terminal
THEOS_RS07405	SM01185	THEOS_RS07405
THEOS_RS07430	SM00960	Roadblock/LC7 domain
THEOS_RS07465	SM01387	THEOS_RS07465
THEOS_RS07470	SM00316	Ribosomal protein S1-like RNA-binding domain
THEOS_RS07470	SM00322	K homology RNA-binding domain
THEOS_RS07475	SM00849	Metallo-beta-lactamase superfamily
THEOS_RS07485	SM00831	Cation transporter/ATPase, N-terminus
THEOS_RS07490	SM00448	cheY-homologous receiver domain
THEOS_RS07495	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THEOS_RS07495	SM00091	PAS domain
THEOS_RS07495	SM00387	Histidine kinase-like ATPases
THEOS_RS07495	SM00388	His Kinase A (phosphoacceptor) domain
THEOS_RS07505	SM00893	Electron transfer flavoprotein domain
THEOS_RS07510	SM00893	Electron transfer flavoprotein domain
THEOS_RS07525	SM00986	Uracil DNA glycosylase superfamily
THEOS_RS07525	SM00987	UreE urease accessory protein, C-terminal domain 
THEOS_RS07530	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THEOS_RS07530	SM00481	DNA polymerase alpha chain like domain
THEOS_RS07530	SM00483	DNA polymerase X family
THEOS_RS07545	SM00890	Domain of unknown function
THEOS_RS07590	SM00840	THEOS_RS07590
THEOS_RS07640	SM00829	Enoylreductase
THEOS_RS07655	SM00487	DEAD-like helicases superfamily
THEOS_RS07655	SM00490	helicase superfamily c-terminal domain
THEOS_RS07655	SM00982	THEOS_RS07655
THEOS_RS07655	SM01058	CarD-like/TRCF domain
THEOS_RS07720	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
THEOS_RS07755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
THEOS_RS07755	SM00895	THEOS_RS07755
THEOS_RS07795	SM00387	Histidine kinase-like ATPases
THEOS_RS07795	SM00433	TopoisomeraseII
THEOS_RS07800	SM00487	DEAD-like helicases superfamily
THEOS_RS07800	SM00490	helicase superfamily c-terminal domain
THEOS_RS07800	SM00847	Helicase associated domain (HA2)  Add an annotation
THEOS_RS07870	SM00830	Chorismate mutase type II
THEOS_RS07905	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
THEOS_RS07905	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
THEOS_RS07955	SM00028	Tetratricopeptide repeats
THEOS_RS07990	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS08020	SM00450	Rhodanese Homology Domain
THEOS_RS08060	SM00594	THEOS_RS08060
THEOS_RS08070	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS08090	SM00116	Domain in cystathionine beta-synthase and other proteins.
THEOS_RS08090	SM01240	THEOS_RS08090
THEOS_RS08130	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS08165	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
THEOS_RS08250	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS08290	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS08315	SM00244	prohibitin homologues
THEOS_RS08440	SM01329	THEOS_RS08440
THEOS_RS08445	SM00955	THEOS_RS08445
THEOS_RS08480	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THEOS_RS08480	SM00465	GIY-YIG type nucleases (URI domain)
THEOS_RS08490	SM00836	DALR anticodon binding domain
THEOS_RS08490	SM01016	Arginyl tRNA synthetase N terminal dom
THEOS_RS08495	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THEOS_RS08545	SM00567	E-Z type HEAT repeats
THEOS_RS08550	SM00448	cheY-homologous receiver domain
THEOS_RS08555	SM00028	Tetratricopeptide repeats
THEOS_RS08555	SM00387	Histidine kinase-like ATPases
THEOS_RS08555	SM00388	His Kinase A (phosphoacceptor) domain
THEOS_RS08590	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS08595	SM00961	Ribulose bisphosphate carboxylase, small chain
THEOS_RS08630	SM00886	Stress responsive A/B Barrel Domain
THEOS_RS08650	SM00861	Transketolase, pyrimidine binding domain
THEOS_RS08660	SM00487	DEAD-like helicases superfamily
THEOS_RS08660	SM00490	helicase superfamily c-terminal domain
THEOS_RS08665	SM00852	Probable molybdopterin binding domain
THEOS_RS08675	SM00478	endonuclease III
THEOS_RS08675	SM00525	THEOS_RS08675
THEOS_RS08680	SM01022	THEOS_RS08680
THEOS_RS08750	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS08755	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS08780	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS08795	SM01234	THEOS_RS08795
THEOS_RS08805	SM00393	Putative single-stranded nucleic acids-binding domain
THEOS_RS08815	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS08830	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS08830	SM00962	SRP54-type protein, GTPase domain
THEOS_RS08830	SM00963	SRP54-type protein, helical bundle domain
THEOS_RS08850	SM00849	Metallo-beta-lactamase superfamily
THEOS_RS08885	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS08890	SM00100	Cyclic nucleotide-monophosphate binding domain
THEOS_RS08890	SM00419	helix_turn_helix, cAMP Regulatory protein
THEOS_RS08905	SM00422	helix_turn_helix, mercury resistance
THEOS_RS08910	SM00346	helix_turn_helix isocitrate lyase regulation
THEOS_RS08950	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
THEOS_RS08955	SM00729	Elongator protein 3, MiaB family, Radical SAM
THEOS_RS09040	SM00642	Alpha-amylase domain
THEOS_RS09065	SM00116	Domain in cystathionine beta-synthase and other proteins.
THEOS_RS09070	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS09075	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS09095	SM00829	Enoylreductase
THEOS_RS09155	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS09165	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
THEOS_RS09175	SM00829	Enoylreductase
THEOS_RS09220	SM00316	Ribosomal protein S1-like RNA-binding domain
THEOS_RS09240	SM00851	MGS-like domain
THEOS_RS09275	SM00704	CDGSH-type zinc finger. Function unknown.
THEOS_RS09300	SM00448	cheY-homologous receiver domain
THEOS_RS09300	SM00862	Transcriptional regulatory protein, C terminal
THEOS_RS09315	SM00028	Tetratricopeptide repeats
THEOS_RS09350	SM00729	Elongator protein 3, MiaB family, Radical SAM
THEOS_RS09375	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS09395	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THEOS_RS09430	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
THEOS_RS09430	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
THEOS_RS09480	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS09500	SM00257	Lysin motif
THEOS_RS09535	SM00478	endonuclease III
THEOS_RS09540	SM00881	CoA binding domain
THEOS_RS09570	SM00859	Semialdehyde dehydrogenase, NAD binding domain
THEOS_RS09645	SM00649	Ribosomal protein L11/L12
THEOS_RS09650	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
THEOS_RS09650	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
THEOS_RS09690	SM00849	Metallo-beta-lactamase superfamily
THEOS_RS09690	SM01027	Beta-Casp domain
THEOS_RS09705	SM00478	endonuclease III
THEOS_RS09765	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS09770	SM00845	GatB domain
THEOS_RS09780	SM00855	Phosphoglycerate mutase family
THEOS_RS09850	SM00226	Low molecular weight phosphatase family
THEOS_RS09885	SM00729	Elongator protein 3, MiaB family, Radical SAM
THEOS_RS09895	SM00849	Metallo-beta-lactamase superfamily
THEOS_RS09900	SM00861	Transketolase, pyrimidine binding domain
THEOS_RS09920	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
THEOS_RS09945	SM00046	Diacylglycerol kinase catalytic domain (presumed)
THEOS_RS09985	SM00938	Nitrogen regulatory protein P-II
THEOS_RS10010	SM01005	Alanine racemase, C-terminal domain
THEOS_RS10040	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
THEOS_RS10040	SM01232	THEOS_RS10040
THEOS_RS10050	SM00316	Ribosomal protein S1-like RNA-binding domain
THEOS_RS10095	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
THEOS_RS10125	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS10135	SM00244	prohibitin homologues
THEOS_RS10170	SM00267	diguanylate cyclase
THEOS_RS10245	SM01058	CarD-like/TRCF domain
THEOS_RS10275	SM00271	DnaJ molecular chaperone homology domain
THEOS_RS10280	SM00357	Cold shock protein domain
THEOS_RS10365	SM00729	Elongator protein 3, MiaB family, Radical SAM
THEOS_RS10400	SM00861	Transketolase, pyrimidine binding domain
THEOS_RS10445	SM00788	Adenylosuccinate synthetase
THEOS_RS10465	SM00363	S4 RNA-binding domain
THEOS_RS10480	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
THEOS_RS10480	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
THEOS_RS10490	SM01120	THEOS_RS10490
THEOS_RS10490	SM01121	THEOS_RS10490
THEOS_RS10545	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
THEOS_RS10545	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
THEOS_RS10565	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS10570	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
THEOS_RS10620	SM00905	Dihydroneopterin aldolase
THEOS_RS10685	SM00562	THEOS_RS10685
THEOS_RS10690	SM00331	Sigma factor PP2C-like phosphatases
THEOS_RS10690	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
THEOS_RS10700	SM00861	Transketolase, pyrimidine binding domain
THEOS_RS10750	SM00116	Domain in cystathionine beta-synthase and other proteins.
THEOS_RS10765	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS10795	SM00357	Cold shock protein domain
THEOS_RS10820	SM00852	Probable molybdopterin binding domain
THEOS_RS10845	SM00481	DNA polymerase alpha chain like domain
THEOS_RS10870	SM00873	B3/4 domain
THEOS_RS10870	SM00874	tRNA synthetase B5 domain
THEOS_RS10870	SM00896	Ferredoxin-fold anticodon binding domain
THEOS_RS10910	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THEOS_RS10915	SM00849	Metallo-beta-lactamase superfamily
THEOS_RS10920	SM00470	ParB-like nuclease domain
THEOS_RS10935	SM01228	THEOS_RS10935
THEOS_RS11470	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
THEOS_RS12470	SM00881	CoA binding domain
THEOS_RS12650	SM00530	Helix-turn-helix XRE-family like proteins 
THEOS_RS12660	SM00382	ATPases associated with a variety of cellular activities
THEOS_RS12665	SM00946	Prolyl-tRNA synthetase, C-terminal
