locus-tag class description AV541_RS00035 PF00676 Dehydrogenase E1 component AV541_RS00040 PF02780 Transketolase, C-terminal domain AV541_RS00040 PF02779 Transketolase, pyrimidine binding domain AV541_RS00050 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_RS00050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV541_RS00095 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AV541_RS00095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV541_RS00105 PF04055 Radical SAM superfamily AV541_RS00105 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AV541_RS00110 PF03099 Biotin/lipoate A/B protein ligase family AV541_RS00115 PF00106 short chain dehydrogenase AV541_RS00125 PF03948 Ribosomal protein L9, C-terminal domain AV541_RS00125 PF01281 Ribosomal protein L9, N-terminal domain AV541_RS00130 PF01084 Ribosomal protein S18 AV541_RS00135 PF00436 Single-strand binding protein family AV541_RS00140 PF01250 Ribosomal protein S6 AV541_RS00150 PF00687 Ribosomal protein L1p/L10e family AV541_RS00155 PF03946 Ribosomal protein L11, N-terminal domain AV541_RS00155 PF00298 Ribosomal protein L11, RNA binding domain AV541_RS00160 PF00467 KOW motif AV541_RS00160 PF02357 Transcription termination factor nusG AV541_RS00165 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AV541_RS00170 PF00471 Ribosomal protein L33 AV541_RS00175 PF03144 Elongation factor Tu domain 2 AV541_RS00175 PF00009 Elongation factor Tu GTP binding domain AV541_RS00175 PF03143 Elongation factor Tu C-terminal domain AV541_RS00200 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AV541_RS00200 PF10996 Beta-Casp domain AV541_RS00200 PF00753 Metallo-beta-lactamase superfamily AV541_RS00215 PF01475 Ferric uptake regulator family AV541_RS00220 PF02789 Cytosol aminopeptidase family, N-terminal domain AV541_RS00220 PF00883 Cytosol aminopeptidase family, catalytic domain AV541_RS00235 PF12849 PBP superfamily domain AV541_RS00240 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS00245 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS00250 PF00005 ABC transporter AV541_RS00255 PF07690 Major Facilitator Superfamily AV541_RS00270 PF01476 LysM domain AV541_RS00270 PF00877 NlpC/P60 family AV541_RS00270 PF08239 Bacterial SH3 domain AV541_RS00295 PF00118 TCP-1/cpn60 chaperonin family AV541_RS00300 PF00166 Chaperonin 10 Kd subunit AV541_RS00305 PF00588 SpoU rRNA Methylase family AV541_RS00305 PF08032 RNA 2'-O ribose methyltransferase substrate binding AV541_RS00320 PF07726 ATPase family associated with various cellular activities (AAA) AV541_RS00320 PF17863 AAA lid domain AV541_RS00330 PF00342 Phosphoglucose isomerase AV541_RS00340 PF00291 Pyridoxal-phosphate dependent enzyme AV541_RS00365 PF14698 Argininosuccinate lyase C-terminal AV541_RS00365 PF00583 Acetyltransferase (GNAT) family AV541_RS00365 PF00206 Lyase AV541_RS00370 PF00206 Lyase AV541_RS00370 PF14698 Argininosuccinate lyase C-terminal AV541_RS00385 PF04151 Bacterial pre-peptidase C-terminal domain AV541_RS00385 PF00082 Subtilase family AV541_RS00390 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_RS00390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV541_RS00395 PF00364 Biotin-requiring enzyme AV541_RS00395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV541_RS00395 PF02817 e3 binding domain AV541_RS00400 PF02779 Transketolase, pyrimidine binding domain AV541_RS00400 PF00676 Dehydrogenase E1 component AV541_RS00400 PF16870 2-oxoglutarate dehydrogenase C-terminal AV541_RS00400 PF16078 2-oxoglutarate dehydrogenase N-terminus AV541_RS00405 PF00378 Enoyl-CoA hydratase/isomerase AV541_RS00410 PF07499 RuvA, C-terminal domain AV541_RS00410 PF01330 RuvA N terminal domain AV541_RS00415 PF13419 Haloacid dehalogenase-like hydrolase AV541_RS00425 PF03641 Possible lysine decarboxylase AV541_RS00430 PF00582 Universal stress protein family AV541_RS00435 PF08032 RNA 2'-O ribose methyltransferase substrate binding AV541_RS00435 PF00588 SpoU rRNA Methylase family AV541_RS00440 PF01546 Peptidase family M20/M25/M40 AV541_RS00440 PF07687 Peptidase dimerisation domain AV541_RS00450 PF00480 ROK family AV541_RS00480 PF04551 GcpE protein AV541_RS00495 PF01594 AI-2E family transporter AV541_RS00500 PF01040 UbiA prenyltransferase family AV541_RS00500 PF02628 Cytochrome oxidase assembly protein AV541_RS00505 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AV541_RS00505 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AV541_RS00505 PF00034 Cytochrome c AV541_RS00575 PF01933 Uncharacterised protein family UPF0052 AV541_RS00585 PF02911 Formyl transferase, C-terminal domain AV541_RS00585 PF00551 Formyl transferase AV541_RS00590 PF01327 Polypeptide deformylase AV541_RS00605 PF01676 Metalloenzyme superfamily AV541_RS00625 PF00857 Isochorismatase family AV541_RS00630 PF00730 HhH-GPD superfamily base excision DNA repair protein AV541_RS00640 PF02811 PHP domain AV541_RS00650 PF00174 Oxidoreductase molybdopterin binding domain AV541_RS00655 PF02641 Uncharacterized ACR, COG1993 AV541_RS00665 PF00885 6,7-dimethyl-8-ribityllumazine synthase AV541_RS00715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV541_RS00720 PF00291 Pyridoxal-phosphate dependent enzyme AV541_RS00725 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AV541_RS00730 PF00571 CBS domain AV541_RS00730 PF01380 SIS domain AV541_RS00735 PF00582 Universal stress protein family AV541_RS00740 PF07690 Major Facilitator Superfamily AV541_RS00755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV541_RS00755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV541_RS00755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV541_RS00755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV541_RS00760 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS00765 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS00770 PF01547 Bacterial extracellular solute-binding protein AV541_RS00785 PF00313 'Cold-shock' DNA-binding domain AV541_RS00790 PF01975 Survival protein SurE AV541_RS00795 PF02578 Multi-copper polyphenol oxidoreductase laccase AV541_RS00810 PF00437 Type II/IV secretion system protein AV541_RS00815 PF02934 GatB/GatE catalytic domain AV541_RS00815 PF02637 GatB domain AV541_RS00820 PF02769 AIR synthase related protein, C-terminal domain AV541_RS00820 PF00586 AIR synthase related protein, N-terminal domain AV541_RS00825 PF00300 Histidine phosphatase superfamily (branch 1) AV541_RS00865 PF04012 PspA/IM30 family AV541_RS00895 PF00034 Cytochrome c AV541_RS00900 PF00224 Pyruvate kinase, barrel domain AV541_RS00900 PF02887 Pyruvate kinase, alpha/beta domain AV541_RS00910 PF02768 DNA polymerase III beta subunit, C-terminal domain AV541_RS00910 PF02767 DNA polymerase III beta subunit, central domain AV541_RS00910 PF00712 DNA polymerase III beta subunit, N-terminal domain AV541_RS00915 PF00308 Bacterial dnaA protein AV541_RS00915 PF08299 Bacterial dnaA protein helix-turn-helix AV541_RS00915 PF11638 DnaA N-terminal domain AV541_RS00925 PF02527 rRNA small subunit methyltransferase G AV541_RS00930 PF13614 AAA domain AV541_RS00960 PF00719 Inorganic pyrophosphatase AV541_RS00970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV541_RS00975 PF00365 Phosphofructokinase AV541_RS00990 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AV541_RS00990 PF01409 tRNA synthetases class II core domain (F) AV541_RS00995 PF01266 FAD dependent oxidoreductase AV541_RS01000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV541_RS01005 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AV541_RS01005 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AV541_RS01005 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AV541_RS01015 PF02583 Metal-sensitive transcriptional repressor AV541_RS01030 PF00696 Amino acid kinase family AV541_RS01035 PF01965 DJ-1/PfpI family AV541_RS01045 PF03819 MazG nucleotide pyrophosphohydrolase domain AV541_RS01055 PF01906 Putative heavy-metal-binding AV541_RS01065 PF02630 SCO1/SenC AV541_RS01070 PF02535 ZIP Zinc transporter AV541_RS01075 PF03462 PCRF domain AV541_RS01075 PF00472 RF-1 domain AV541_RS01085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV541_RS01085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV541_RS01085 PF02770 Acyl-CoA dehydrogenase, middle domain AV541_RS01090 PF04055 Radical SAM superfamily AV541_RS01095 PF13416 Bacterial extracellular solute-binding protein AV541_RS01105 PF00034 Cytochrome c AV541_RS01115 PF00355 Rieske [2Fe-2S] domain AV541_RS01120 PF13631 Cytochrome b(N-terminal)/b6/petB AV541_RS01130 PF00171 Aldehyde dehydrogenase family AV541_RS01135 PF00696 Amino acid kinase family AV541_RS01135 PF01472 PUA domain AV541_RS01155 PF01923 Cobalamin adenosyltransferase AV541_RS01165 PF00005 ABC transporter AV541_RS01210 PF02441 Flavoprotein AV541_RS01220 PF01255 Putative undecaprenyl diphosphate synthase AV541_RS01225 PF00682 HMGL-like AV541_RS01240 PF00330 Aconitase family (aconitate hydratase) AV541_RS01245 PF00694 Aconitase C-terminal domain AV541_RS01255 PF08271 TFIIB zinc-binding AV541_RS01265 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV541_RS01265 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV541_RS01270 PF00696 Amino acid kinase family AV541_RS01280 PF02540 NAD synthase AV541_RS01280 PF00795 Carbon-nitrogen hydrolase AV541_RS01300 PF13932 GidA associated domain AV541_RS01300 PF01134 Glucose inhibited division protein A AV541_RS01310 PF01380 SIS domain AV541_RS01315 PF00395 S-layer homology domain AV541_RS01320 PF17757 UvrB interaction domain AV541_RS01320 PF12344 Ultra-violet resistance protein B AV541_RS01320 PF04851 Type III restriction enzyme, res subunit AV541_RS01320 PF02151 UvrB/uvrC motif AV541_RS01320 PF00271 Helicase conserved C-terminal domain AV541_RS01325 PF02817 e3 binding domain AV541_RS01325 PF00364 Biotin-requiring enzyme AV541_RS01325 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV541_RS01330 PF02073 Thermophilic metalloprotease (M29) AV541_RS01340 PF00005 ABC transporter AV541_RS01350 PF02515 CoA-transferase family III AV541_RS01355 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS01365 PF16193 AAA C-terminal domain AV541_RS01365 PF12002 MgsA AAA+ ATPase C terminal AV541_RS01365 PF00004 ATPase family associated with various cellular activities (AAA) AV541_RS01390 PF01227 GTP cyclohydrolase I AV541_RS01405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV541_RS01405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AV541_RS01405 PF03129 Anticodon binding domain AV541_RS01405 PF02824 TGS domain AV541_RS01435 PF09115 DNA polymerase III, delta subunit, C terminal AV541_RS01465 PF01209 ubiE/COQ5 methyltransferase family AV541_RS01470 PF01451 Low molecular weight phosphotyrosine protein phosphatase AV541_RS01500 PF00117 Glutamine amidotransferase class-I AV541_RS01505 PF00591 Glycosyl transferase family, a/b domain AV541_RS01505 PF02885 Glycosyl transferase family, helical bundle domain AV541_RS01510 PF00355 Rieske [2Fe-2S] domain AV541_RS01525 PF00005 ABC transporter AV541_RS01535 PF00463 Isocitrate lyase family AV541_RS01540 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_RS01540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV541_RS01545 PF00005 ABC transporter AV541_RS01550 PF02687 FtsX-like permease family AV541_RS01550 PF00005 ABC transporter AV541_RS01550 PF12704 MacB-like periplasmic core domain AV541_RS01560 PF02272 DHHA1 domain AV541_RS01560 PF01411 tRNA synthetases class II (A) AV541_RS01560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AV541_RS01570 PF03652 Holliday junction resolvase AV541_RS01580 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS01595 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AV541_RS01595 PF13378 Enolase C-terminal domain-like AV541_RS01600 PF13419 Haloacid dehalogenase-like hydrolase AV541_RS01610 PF01571 Aminomethyltransferase folate-binding domain AV541_RS01615 PF02464 Competence-damaged protein AV541_RS01615 PF00994 Probable molybdopterin binding domain AV541_RS01615 PF18146 Damage-inducible protein CinA KH domain AV541_RS01620 PF02834 LigT like Phosphoesterase AV541_RS01625 PF00154 recA bacterial DNA recombination protein AV541_RS01630 PF00013 KH domain AV541_RS01630 PF12072 Domain of unknown function (DUF3552) AV541_RS01630 PF01966 HD domain AV541_RS01640 PF07977 FabA-like domain AV541_RS01655 PF05000 RNA polymerase Rpb1, domain 4 AV541_RS01655 PF04983 RNA polymerase Rpb1, domain 3 AV541_RS01655 PF00623 RNA polymerase Rpb1, domain 2 AV541_RS01655 PF04997 RNA polymerase Rpb1, domain 1 AV541_RS01655 PF04998 RNA polymerase Rpb1, domain 5 AV541_RS01660 PF00596 Class II Aldolase and Adducin N-terminal domain AV541_RS01670 PF00561 alpha/beta hydrolase fold AV541_RS01685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AV541_RS01685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AV541_RS01685 PF06827 Zinc finger found in FPG and IleRS AV541_RS01695 PF03061 Thioesterase superfamily AV541_RS01700 PF01329 Pterin 4 alpha carbinolamine dehydratase AV541_RS01715 PF01425 Amidase AV541_RS01730 PF02142 MGS-like domain AV541_RS01735 PF03819 MazG nucleotide pyrophosphohydrolase domain AV541_RS01755 PF02542 YgbB family AV541_RS01760 PF03458 UPF0126 domain AV541_RS01765 PF01967 MoaC family AV541_RS01800 PF02384 N-6 DNA Methylase AV541_RS01800 PF12161 HsdM N-terminal domain AV541_RS01830 PF00829 Ribosomal prokaryotic L21 protein AV541_RS01835 PF01016 Ribosomal L27 protein AV541_RS01845 PF01467 Cytidylyltransferase-like AV541_RS01870 PF02569 Pantoate-beta-alanine ligase AV541_RS01875 PF00437 Type II/IV secretion system protein AV541_RS01880 PF01116 Fructose-bisphosphate aldolase class-II AV541_RS01890 PF00591 Glycosyl transferase family, a/b domain AV541_RS01890 PF02885 Glycosyl transferase family, helical bundle domain AV541_RS01890 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AV541_RS01895 PF08460 Bacterial SH3 domain AV541_RS01895 PF01551 Peptidase family M23 AV541_RS01905 PF17848 Acetyl-coA carboxylase zinc finger domain AV541_RS01905 PF01039 Carboxyl transferase domain AV541_RS01910 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AV541_RS02000 PF00534 Glycosyl transferases group 1 AV541_RS02005 PF01050 Mannose-6-phosphate isomerase AV541_RS02005 PF00483 Nucleotidyl transferase AV541_RS02010 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AV541_RS02020 PF00085 Thioredoxin AV541_RS02025 PF02504 Fatty acid synthesis protein AV541_RS02035 PF02585 GlcNAc-PI de-N-acetylase AV541_RS02045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AV541_RS02050 PF00156 Phosphoribosyl transferase domain AV541_RS02060 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AV541_RS02060 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AV541_RS02070 PF00364 Biotin-requiring enzyme AV541_RS02070 PF00561 alpha/beta hydrolase fold AV541_RS02080 PF01592 NifU-like N terminal domain AV541_RS02085 PF00266 Aminotransferase class-V AV541_RS02095 PF07732 Multicopper oxidase AV541_RS02095 PF07731 Multicopper oxidase AV541_RS02120 PF08241 Methyltransferase domain AV541_RS02135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV541_RS02135 PF00512 His Kinase A (phospho-acceptor) domain AV541_RS02135 PF00672 HAMP domain AV541_RS02140 PF00486 Transcriptional regulatory protein, C terminal AV541_RS02140 PF00072 Response regulator receiver domain AV541_RS02150 PF00403 Heavy-metal-associated domain AV541_RS02155 PF02583 Metal-sensitive transcriptional repressor AV541_RS02160 PF00403 Heavy-metal-associated domain AV541_RS02165 PF13291 ACT domain AV541_RS02165 PF04607 Region found in RelA / SpoT proteins AV541_RS02165 PF02824 TGS domain AV541_RS02175 PF00924 Mechanosensitive ion channel AV541_RS02180 PF06778 Chlorite dismutase AV541_RS02185 PF01894 Uncharacterised protein family UPF0047 AV541_RS02230 PF17746 SfsA N-terminal OB domain AV541_RS02230 PF03749 Sugar fermentation stimulation protein RE domain AV541_RS02235 PF02535 ZIP Zinc transporter AV541_RS02250 PF01235 Sodium:alanine symporter family AV541_RS02260 PF04073 Aminoacyl-tRNA editing domain AV541_RS02260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV541_RS02260 PF03129 Anticodon binding domain AV541_RS02265 PF07687 Peptidase dimerisation domain AV541_RS02265 PF01546 Peptidase family M20/M25/M40 AV541_RS02275 PF00164 Ribosomal protein S12/S23 AV541_RS02280 PF00177 Ribosomal protein S7p/S5e AV541_RS02290 PF00009 Elongation factor Tu GTP binding domain AV541_RS02290 PF03144 Elongation factor Tu domain 2 AV541_RS02290 PF03143 Elongation factor Tu C-terminal domain AV541_RS02295 PF00338 Ribosomal protein S10p/S20e AV541_RS02300 PF00297 Ribosomal protein L3 AV541_RS02305 PF00573 Ribosomal protein L4/L1 family AV541_RS02310 PF00276 Ribosomal protein L23 AV541_RS02315 PF00181 Ribosomal Proteins L2, RNA binding domain AV541_RS02315 PF03947 Ribosomal Proteins L2, C-terminal domain AV541_RS02320 PF00203 Ribosomal protein S19 AV541_RS02325 PF00237 Ribosomal protein L22p/L17e AV541_RS02330 PF00189 Ribosomal protein S3, C-terminal domain AV541_RS02330 PF07650 KH domain AV541_RS02335 PF00252 Ribosomal protein L16p/L10e AV541_RS02340 PF00831 Ribosomal L29 protein AV541_RS02345 PF00366 Ribosomal protein S17 AV541_RS02350 PF00238 Ribosomal protein L14p/L23e AV541_RS02355 PF00467 KOW motif AV541_RS02355 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AV541_RS02360 PF00673 ribosomal L5P family C-terminus AV541_RS02360 PF00281 Ribosomal protein L5 AV541_RS02365 PF00253 Ribosomal protein S14p/S29e AV541_RS02370 PF00410 Ribosomal protein S8 AV541_RS02375 PF00347 Ribosomal protein L6 AV541_RS02380 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AV541_RS02385 PF03719 Ribosomal protein S5, C-terminal domain AV541_RS02385 PF00333 Ribosomal protein S5, N-terminal domain AV541_RS02390 PF00327 Ribosomal protein L30p/L7e AV541_RS02395 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AV541_RS02400 PF00344 SecY translocase AV541_RS02410 PF00557 Metallopeptidase family M24 AV541_RS02415 PF01176 Translation initiation factor 1A / IF-1 AV541_RS02420 PF00444 Ribosomal protein L36 AV541_RS02425 PF00416 Ribosomal protein S13/S18 AV541_RS02430 PF00411 Ribosomal protein S11 AV541_RS02435 PF01479 S4 domain AV541_RS02435 PF00163 Ribosomal protein S4/S9 N-terminal domain AV541_RS02440 PF01000 RNA polymerase Rpb3/RpoA insert domain AV541_RS02440 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AV541_RS02440 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AV541_RS02445 PF01196 Ribosomal protein L17 AV541_RS02475 PF02629 CoA binding domain AV541_RS02475 PF06971 Putative DNA-binding protein N-terminus AV541_RS02485 PF00348 Polyprenyl synthetase AV541_RS02490 PF01725 Ham1 family AV541_RS02505 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS02510 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS02530 PF03641 Possible lysine decarboxylase AV541_RS02535 PF01177 Asp/Glu/Hydantoin racemase AV541_RS02540 PF00438 S-adenosylmethionine synthetase, N-terminal domain AV541_RS02540 PF02772 S-adenosylmethionine synthetase, central domain AV541_RS02540 PF02773 S-adenosylmethionine synthetase, C-terminal domain AV541_RS02545 PF00990 Diguanylate cyclase, GGDEF domain AV541_RS02545 PF00072 Response regulator receiver domain AV541_RS02550 PF17944 Arginine decarboxylase C-terminal helical extension AV541_RS02550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AV541_RS02550 PF17810 Arginine decarboxylase helical bundle domain AV541_RS02565 PF14572 Phosphoribosyl synthetase-associated domain AV541_RS02565 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AV541_RS02570 PF00557 Metallopeptidase family M24 AV541_RS02570 PF01321 Creatinase/Prolidase N-terminal domain AV541_RS02575 PF01521 Iron-sulphur cluster biosynthesis AV541_RS02585 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS02590 PF12911 N-terminal TM domain of oligopeptide transport permease C AV541_RS02590 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS02595 PF01416 tRNA pseudouridine synthase AV541_RS02605 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS02625 PF02566 OsmC-like protein AV541_RS02635 PF00753 Metallo-beta-lactamase superfamily AV541_RS02650 PF00011 Hsp20/alpha crystallin family AV541_RS02655 PF00155 Aminotransferase class I and II AV541_RS02660 PF02390 Putative methyltransferase AV541_RS02675 PF00919 Uncharacterized protein family UPF0004 AV541_RS02675 PF04055 Radical SAM superfamily AV541_RS02680 PF01230 HIT domain AV541_RS02695 PF00156 Phosphoribosyl transferase domain AV541_RS02705 PF13419 Haloacid dehalogenase-like hydrolase AV541_RS02710 PF01812 5-formyltetrahydrofolate cyclo-ligase family AV541_RS02730 PF02223 Thymidylate kinase AV541_RS02765 PF02132 RecR protein AV541_RS02765 PF13662 Toprim domain AV541_RS02770 PF02575 YbaB/EbfC DNA-binding family AV541_RS02775 PF00490 Delta-aminolevulinic acid dehydratase AV541_RS02800 PF00072 Response regulator receiver domain AV541_RS02800 PF00486 Transcriptional regulatory protein, C terminal AV541_RS02810 PF14693 Ribosomal protein TL5, C-terminal domain AV541_RS02810 PF01386 Ribosomal L25p family AV541_RS02815 PF01195 Peptidyl-tRNA hydrolase AV541_RS02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV541_RS02825 PF00986 DNA gyrase B subunit, carboxyl terminus AV541_RS02825 PF00204 DNA gyrase B AV541_RS02825 PF01751 Toprim domain AV541_RS02835 PF09573 TaqI restriction endonuclease AV541_RS02840 PF07669 Eco57I restriction-modification methylase AV541_RS02840 PF12950 TaqI-like C-terminal specificity domain AV541_RS02845 PF00155 Aminotransferase class I and II AV541_RS02870 PF01619 Proline dehydrogenase AV541_RS02880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AV541_RS02880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AV541_RS02905 PF01916 Deoxyhypusine synthase AV541_RS02915 PF02621 Menaquinone biosynthesis AV541_RS02920 PF00027 Cyclic nucleotide-binding domain AV541_RS02920 PF13545 Crp-like helix-turn-helix domain AV541_RS02930 PF08486 Stage II sporulation protein AV541_RS02945 PF00625 Guanylate kinase AV541_RS02950 PF01192 RNA polymerase Rpb6 AV541_RS02955 PF04127 DNA / pantothenate metabolism flavoprotein AV541_RS02955 PF02441 Flavoprotein AV541_RS02960 PF01316 Arginine repressor, DNA binding domain AV541_RS02960 PF02863 Arginine repressor, C-terminal domain AV541_RS02965 PF01914 MarC family integral membrane protein AV541_RS02975 PF00075 RNase H AV541_RS02985 PF08734 GYD domain AV541_RS02990 PF05685 Putative restriction endonuclease AV541_RS02995 PF00958 GMP synthase C terminal domain AV541_RS02995 PF00117 Glutamine amidotransferase class-I AV541_RS03015 PF01048 Phosphorylase superfamily AV541_RS03020 PF14572 Phosphoribosyl synthetase-associated domain AV541_RS03020 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AV541_RS03035 PF03061 Thioesterase superfamily AV541_RS03070 PF01266 FAD dependent oxidoreductase AV541_RS03075 PF00180 Isocitrate/isopropylmalate dehydrogenase AV541_RS03095 PF01142 tRNA pseudouridine synthase D (TruD) AV541_RS03115 PF08240 Alcohol dehydrogenase GroES-like domain AV541_RS03115 PF00107 Zinc-binding dehydrogenase AV541_RS03165 PF01259 SAICAR synthetase AV541_RS03200 PF02627 Carboxymuconolactone decarboxylase family AV541_RS03210 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AV541_RS03210 PF01488 Shikimate / quinate 5-dehydrogenase AV541_RS03240 PF00072 Response regulator receiver domain AV541_RS03240 PF00486 Transcriptional regulatory protein, C terminal AV541_RS03245 PF03006 Haemolysin-III related AV541_RS03255 PF17863 AAA lid domain AV541_RS03255 PF07726 ATPase family associated with various cellular activities (AAA) AV541_RS03260 PF14492 Elongation Factor G, domain II AV541_RS03260 PF00009 Elongation factor Tu GTP binding domain AV541_RS03260 PF03144 Elongation factor Tu domain 2 AV541_RS03260 PF00679 Elongation factor G C-terminus AV541_RS03260 PF03764 Elongation factor G, domain IV AV541_RS03265 PF14464 Prokaryotic homologs of the JAB domain AV541_RS03270 PF00491 Arginase family AV541_RS03280 PF01343 Peptidase family S49 AV541_RS03285 PF10672 S-adenosylmethionine-dependent methyltransferase AV541_RS03285 PF17785 PUA-like domain AV541_RS03290 PF01434 Peptidase family M41 AV541_RS03290 PF06480 FtsH Extracellular AV541_RS03290 PF17862 AAA+ lid domain AV541_RS03290 PF00004 ATPase family associated with various cellular activities (AAA) AV541_RS03300 PF01025 GrpE AV541_RS03345 PF10417 C-terminal domain of 1-Cys peroxiredoxin AV541_RS03345 PF00578 AhpC/TSA family AV541_RS03355 PF00085 Thioredoxin AV541_RS03365 PF09123 Domain of unknown function (DUF1931) AV541_RS03375 PF02080 TrkA-C domain AV541_RS03380 PF00999 Sodium/hydrogen exchanger family AV541_RS03395 PF00571 CBS domain AV541_RS03395 PF01368 DHH family AV541_RS03395 PF02272 DHHA1 domain AV541_RS03395 PF01743 Poly A polymerase head domain AV541_RS03405 PF01464 Transglycosylase SLT domain AV541_RS03415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV541_RS03420 PF01645 Conserved region in glutamate synthase AV541_RS03420 PF01493 GXGXG motif AV541_RS03420 PF00310 Glutamine amidotransferases class-II AV541_RS03420 PF04898 Glutamate synthase central domain AV541_RS03455 PF06418 CTP synthase N-terminus AV541_RS03455 PF00117 Glutamine amidotransferase class-I AV541_RS03460 PF00572 Ribosomal protein L13 AV541_RS03465 PF00380 Ribosomal protein S9/S16 AV541_RS03475 PF00156 Phosphoribosyl transferase domain AV541_RS03475 PF01738 Dienelactone hydrolase family AV541_RS03500 PF02675 S-adenosylmethionine decarboxylase AV541_RS03505 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AV541_RS03520 PF13085 2Fe-2S iron-sulfur cluster binding domain AV541_RS03530 PF01336 OB-fold nucleic acid binding domain AV541_RS03530 PF00152 tRNA synthetases class II (D, K and N) AV541_RS03545 PF01026 TatD related DNase AV541_RS03550 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AV541_RS03550 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AV541_RS03555 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AV541_RS03555 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AV541_RS03565 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AV541_RS03565 PF01502 Phosphoribosyl-AMP cyclohydrolase AV541_RS03570 PF00977 Histidine biosynthesis protein AV541_RS03595 PF04029 2-phosphosulpholactate phosphatase AV541_RS03600 PF13545 Crp-like helix-turn-helix domain AV541_RS03600 PF00027 Cyclic nucleotide-binding domain AV541_RS03610 PF01048 Phosphorylase superfamily AV541_RS03615 PF00378 Enoyl-CoA hydratase/isomerase AV541_RS03630 PF07311 Dodecin AV541_RS03635 PF13193 AMP-binding enzyme C-terminal domain AV541_RS03635 PF00501 AMP-binding enzyme AV541_RS03645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV541_RS03645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV541_RS03645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV541_RS03645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV541_RS03650 PF00580 UvrD/REP helicase N-terminal domain AV541_RS03650 PF13361 UvrD-like helicase C-terminal domain AV541_RS03670 PF00034 Cytochrome c AV541_RS03680 PF02683 Cytochrome C biogenesis protein transmembrane region AV541_RS03685 PF00005 ABC transporter AV541_RS03695 PF01578 Cytochrome C assembly protein AV541_RS03700 PF03100 CcmE AV541_RS03705 PF01578 Cytochrome C assembly protein AV541_RS03705 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AV541_RS03710 PF08534 Redoxin AV541_RS03740 PF01649 Ribosomal protein S20 AV541_RS03745 PF17070 30S ribosomal protein Thx AV541_RS03755 PF08544 GHMP kinases C terminal AV541_RS03755 PF00288 GHMP kinases N terminal domain AV541_RS03770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AV541_RS03770 PF01926 50S ribosome-binding GTPase AV541_RS03785 PF01648 4'-phosphopantetheinyl transferase superfamily AV541_RS03795 PF01761 3-dehydroquinate synthase AV541_RS03800 PF01202 Shikimate kinase AV541_RS03805 PF01264 Chorismate synthase AV541_RS03810 PF00263 Bacterial type II and III secretion system protein AV541_RS03810 PF03958 Bacterial type II/III secretion system short domain AV541_RS03830 PF11104 Type IV pilus assembly protein PilM; AV541_RS03835 PF00180 Isocitrate/isopropylmalate dehydrogenase AV541_RS03845 PF00072 Response regulator receiver domain AV541_RS03865 PF03309 Type III pantothenate kinase AV541_RS03875 PF01520 N-acetylmuramoyl-L-alanine amidase AV541_RS03885 PF03793 PASTA domain AV541_RS03885 PF00069 Protein kinase domain AV541_RS03890 PF01734 Patatin-like phospholipase AV541_RS03895 PF10502 Signal peptidase, peptidase S26 AV541_RS03905 PF11870 Domain of unknown function (DUF3390) AV541_RS03905 PF13183 4Fe-4S dicluster domain AV541_RS03905 PF02589 LUD domain AV541_RS03910 PF02754 Cysteine-rich domain AV541_RS03930 PF00072 Response regulator receiver domain AV541_RS03930 PF00486 Transcriptional regulatory protein, C terminal AV541_RS03945 PF00027 Cyclic nucleotide-binding domain AV541_RS03945 PF13545 Crp-like helix-turn-helix domain AV541_RS03960 PF03091 CutA1 divalent ion tolerance protein AV541_RS03970 PF01220 Dehydroquinase class II AV541_RS03975 PF05958 tRNA (Uracil-5-)-methyltransferase AV541_RS03980 PF00196 Bacterial regulatory proteins, luxR family AV541_RS03980 PF00072 Response regulator receiver domain AV541_RS03995 PF00216 Bacterial DNA-binding protein AV541_RS04005 PF04493 Endonuclease V AV541_RS04015 PF01238 Phosphomannose isomerase type I AV541_RS04025 PF00899 ThiF family AV541_RS04030 PF00285 Citrate synthase, C-terminal domain AV541_RS04040 PF00005 ABC transporter AV541_RS04040 PF00664 ABC transporter transmembrane region AV541_RS04045 PF08245 Mur ligase middle domain AV541_RS04055 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS04055 PF12911 N-terminal TM domain of oligopeptide transport permease C AV541_RS04060 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS04065 PF00005 ABC transporter AV541_RS04070 PF00005 ABC transporter AV541_RS04070 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV541_RS04080 PF02653 Branched-chain amino acid transport system / permease component AV541_RS04085 PF13458 Periplasmic binding protein AV541_RS04090 PF03951 Glutamine synthetase, beta-Grasp domain AV541_RS04090 PF00120 Glutamine synthetase, catalytic domain AV541_RS04095 PF02872 5'-nucleotidase, C-terminal domain AV541_RS04095 PF00149 Calcineurin-like phosphoesterase AV541_RS04105 PF08676 MutL C terminal dimerisation domain AV541_RS04105 PF01119 DNA mismatch repair protein, C-terminal domain AV541_RS04110 PF03737 Aldolase/RraA AV541_RS04115 PF00551 Formyl transferase AV541_RS04115 PF01842 ACT domain AV541_RS04120 PF13180 PDZ domain AV541_RS04120 PF17820 PDZ domain AV541_RS04135 PF16868 NMT1-like family AV541_RS04150 PF02163 Peptidase family M50 AV541_RS04150 PF00571 CBS domain AV541_RS04160 PF02350 UDP-N-acetylglucosamine 2-epimerase AV541_RS04165 PF00953 Glycosyl transferase family 4 AV541_RS04190 PF04055 Radical SAM superfamily AV541_RS04190 PF01938 TRAM domain AV541_RS04190 PF00919 Uncharacterized protein family UPF0004 AV541_RS04205 PF12804 MobA-like NTP transferase domain AV541_RS04210 PF00005 ABC transporter AV541_RS04220 PF02653 Branched-chain amino acid transport system / permease component AV541_RS04225 PF02608 ABC transporter substrate-binding protein PnrA-like AV541_RS04230 PF00578 AhpC/TSA family AV541_RS04235 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AV541_RS04240 PF09334 tRNA synthetases class I (M) AV541_RS04240 PF00133 tRNA synthetases class I (I, L, M and V) AV541_RS04240 PF01588 Putative tRNA binding domain AV541_RS04245 PF17820 PDZ domain AV541_RS04245 PF03572 Peptidase family S41 AV541_RS04245 PF01471 Putative peptidoglycan binding domain AV541_RS04255 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AV541_RS04255 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AV541_RS04300 PF07238 PilZ domain AV541_RS04300 PF00069 Protein kinase domain AV541_RS04320 PF17785 PUA-like domain AV541_RS04320 PF10672 S-adenosylmethionine-dependent methyltransferase AV541_RS04330 PF01496 V-type ATPase 116kDa subunit family AV541_RS04330 PF18670 V-type ATPase subunit I, N-terminal domain AV541_RS04340 PF01991 ATP synthase (E/31 kDa) subunit AV541_RS04345 PF01992 ATP synthase (C/AC39) subunit AV541_RS04350 PF01990 ATP synthase (F/14-kDa) subunit AV541_RS04355 PF02874 ATP synthase alpha/beta family, beta-barrel domain AV541_RS04355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV541_RS04355 PF16886 ATPsynthase alpha/beta subunit N-term extension AV541_RS04360 PF02874 ATP synthase alpha/beta family, beta-barrel domain AV541_RS04360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV541_RS04365 PF01813 ATP synthase subunit D AV541_RS04385 PF05193 Peptidase M16 inactive domain AV541_RS04385 PF00675 Insulinase (Peptidase family M16) AV541_RS04390 PF00675 Insulinase (Peptidase family M16) AV541_RS04390 PF05193 Peptidase M16 inactive domain AV541_RS04400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV541_RS04400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV541_RS04405 PF02446 4-alpha-glucanotransferase AV541_RS04410 PF08275 DNA primase catalytic core, N-terminal domain AV541_RS04410 PF13662 Toprim domain AV541_RS04410 PF01807 CHC2 zinc finger AV541_RS04415 PF00211 Adenylate and Guanylate cyclase catalytic domain AV541_RS04415 PF16701 Adenylate cyclase regulatory domain AV541_RS04425 PF00270 DEAD/DEAH box helicase AV541_RS04425 PF09369 Domain of unknown function (DUF1998) AV541_RS04425 PF00271 Helicase conserved C-terminal domain AV541_RS04430 PF01906 Putative heavy-metal-binding AV541_RS04480 PF00872 Transposase, Mutator family AV541_RS04490 PF01642 Methylmalonyl-CoA mutase AV541_RS04490 PF02310 B12 binding domain AV541_RS04500 PF01638 HxlR-like helix-turn-helix AV541_RS04505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AV541_RS04510 PF03776 Septum formation topological specificity factor MinE AV541_RS04520 PF08402 TOBE domain AV541_RS04520 PF00005 ABC transporter AV541_RS04525 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS04530 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS04535 PF13416 Bacterial extracellular solute-binding protein AV541_RS04550 PF00106 short chain dehydrogenase AV541_RS04570 PF00694 Aconitase C-terminal domain AV541_RS04580 PF05698 Bacterial trigger factor protein (TF) C-terminus AV541_RS04580 PF05697 Bacterial trigger factor protein (TF) AV541_RS04610 PF05685 Putative restriction endonuclease AV541_RS04625 PF07963 Prokaryotic N-terminal methylation motif AV541_RS04650 PF12019 Type II transport protein GspH AV541_RS04650 PF07963 Prokaryotic N-terminal methylation motif AV541_RS04660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV541_RS04660 PF00205 Thiamine pyrophosphate enzyme, central domain AV541_RS04660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV541_RS04665 PF10369 Small subunit of acetolactate synthase AV541_RS04670 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AV541_RS04670 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AV541_RS04675 PF08502 LeuA allosteric (dimerisation) domain AV541_RS04675 PF00682 HMGL-like AV541_RS04680 PF00682 HMGL-like AV541_RS04680 PF08502 LeuA allosteric (dimerisation) domain AV541_RS04695 PF00005 ABC transporter AV541_RS04745 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AV541_RS04745 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AV541_RS04755 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV541_RS04755 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV541_RS04760 PF01960 ArgJ family AV541_RS04805 PF02545 Maf-like protein AV541_RS04815 PF01791 DeoC/LacD family aldolase AV541_RS04820 PF01926 50S ribosome-binding GTPase AV541_RS04820 PF06071 Protein of unknown function (DUF933) AV541_RS04850 PF00588 SpoU rRNA Methylase family AV541_RS04855 PF07730 Histidine kinase AV541_RS04855 PF17200 Single Cache domain 2 AV541_RS04860 PF01451 Low molecular weight phosphotyrosine protein phosphatase AV541_RS04865 PF03881 Fructosamine kinase AV541_RS04875 PF04227 Indigoidine synthase A like protein AV541_RS04880 PF13464 Domain of unknown function (DUF4115) AV541_RS04885 PF04055 Radical SAM superfamily AV541_RS04885 PF00919 Uncharacterized protein family UPF0004 AV541_RS04885 PF18693 TRAM domain AV541_RS04890 PF02254 TrkA-N domain AV541_RS04890 PF02080 TrkA-C domain AV541_RS04900 PF11897 Protein of unknown function (DUF3417) AV541_RS04900 PF00343 Carbohydrate phosphorylase AV541_RS04905 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV541_RS04910 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS04915 PF10458 Valyl tRNA synthetase tRNA binding arm AV541_RS04915 PF00133 tRNA synthetases class I (I, L, M and V) AV541_RS04915 PF08264 Anticodon-binding domain of tRNA AV541_RS04935 PF00977 Histidine biosynthesis protein AV541_RS04940 PF00218 Indole-3-glycerol phosphate synthase AV541_RS04950 PF12728 Helix-turn-helix domain AV541_RS04955 PF01734 Patatin-like phospholipase AV541_RS04965 PF00005 ABC transporter AV541_RS04975 PF16868 NMT1-like family AV541_RS04980 PF01053 Cys/Met metabolism PLP-dependent enzyme AV541_RS04985 PF13411 MerR HTH family regulatory protein AV541_RS04995 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_RS04995 PF00403 Heavy-metal-associated domain AV541_RS04995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV541_RS05000 PF02073 Thermophilic metalloprotease (M29) AV541_RS05015 PF03167 Uracil DNA glycosylase superfamily AV541_RS05020 PF01039 Carboxyl transferase domain AV541_RS05035 PF01012 Electron transfer flavoprotein domain AV541_RS05040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV541_RS05040 PF02770 Acyl-CoA dehydrogenase, middle domain AV541_RS05040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV541_RS05050 PF17770 Ribonuclease J C-terminal domain AV541_RS05050 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AV541_RS05050 PF12706 Beta-lactamase superfamily domain AV541_RS05055 PF03725 3' exoribonuclease family, domain 2 AV541_RS05055 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AV541_RS05055 PF01138 3' exoribonuclease family, domain 1 AV541_RS05055 PF00013 KH domain AV541_RS05055 PF00575 S1 RNA binding domain AV541_RS05060 PF00312 Ribosomal protein S15 AV541_RS05065 PF07690 Major Facilitator Superfamily AV541_RS05075 PF00115 Cytochrome C and Quinol oxidase polypeptide I AV541_RS05080 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AV541_RS05080 PF09125 Cytochrome C oxidase subunit II, transmembrane AV541_RS05085 PF08113 Cytochrome c oxidase subunit IIa family AV541_RS05090 PF00025 ADP-ribosylation factor family AV541_RS05105 PF00491 Arginase family AV541_RS05135 PF08207 Elongation factor P (EF-P) KOW-like domain AV541_RS05135 PF01132 Elongation factor P (EF-P) OB domain AV541_RS05135 PF09285 Elongation factor P, C-terminal AV541_RS05145 PF02785 Biotin carboxylase C-terminal domain AV541_RS05145 PF00289 Biotin carboxylase, N-terminal domain AV541_RS05145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AV541_RS05155 PF01029 NusB family AV541_RS05160 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AV541_RS05160 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AV541_RS05165 PF02681 Divergent PAP2 family AV541_RS05175 PF02754 Cysteine-rich domain AV541_RS05175 PF13183 4Fe-4S dicluster domain AV541_RS05190 PF00756 Putative esterase AV541_RS05195 PF00056 lactate/malate dehydrogenase, NAD binding domain AV541_RS05195 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AV541_RS05205 PF00004 ATPase family associated with various cellular activities (AAA) AV541_RS05205 PF02190 ATP-dependent protease La (LON) substrate-binding domain AV541_RS05205 PF05362 Lon protease (S16) C-terminal proteolytic domain AV541_RS05210 PF13439 Glycosyltransferase Family 4 AV541_RS05210 PF00534 Glycosyl transferases group 1 AV541_RS05235 PF01842 ACT domain AV541_RS05235 PF00800 Prephenate dehydratase AV541_RS05235 PF01817 Chorismate mutase type II AV541_RS05265 PF02608 ABC transporter substrate-binding protein PnrA-like AV541_RS05270 PF12826 Helix-hairpin-helix motif AV541_RS05270 PF03120 NAD-dependent DNA ligase OB-fold domain AV541_RS05270 PF01653 NAD-dependent DNA ligase adenylation domain AV541_RS05270 PF00533 BRCA1 C Terminus (BRCT) domain AV541_RS05275 PF02511 Thymidylate synthase complementing protein AV541_RS05280 PF00291 Pyridoxal-phosphate dependent enzyme AV541_RS05285 PF00290 Tryptophan synthase alpha chain AV541_RS05305 PF02075 Crossover junction endodeoxyribonuclease RuvC AV541_RS05310 PF12327 FtsZ family, C-terminal domain AV541_RS05310 PF00091 Tubulin/FtsZ family, GTPase domain AV541_RS05315 PF02491 SHS2 domain inserted in FTSA AV541_RS05325 PF01565 FAD binding domain AV541_RS05325 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AV541_RS05345 PF08245 Mur ligase middle domain AV541_RS05345 PF02875 Mur ligase family, glutamate ligase domain AV541_RS05350 PF00953 Glycosyl transferase family 4 AV541_RS05375 PF01795 MraW methylase family AV541_RS05395 PF01197 Ribosomal protein L31 AV541_RS05400 PF01008 Initiation factor 2 subunit family AV541_RS05410 PF01551 Peptidase family M23 AV541_RS05420 PF01321 Creatinase/Prolidase N-terminal domain AV541_RS05420 PF00557 Metallopeptidase family M24 AV541_RS05425 PF00133 tRNA synthetases class I (I, L, M and V) AV541_RS05425 PF08264 Anticodon-binding domain of tRNA AV541_RS05430 PF00923 Transaldolase/Fructose-6-phosphate aldolase AV541_RS05435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV541_RS05435 PF07498 Rho termination factor, N-terminal domain AV541_RS05435 PF07497 Rho termination factor, RNA-binding domain AV541_RS05440 PF01872 RibD C-terminal domain AV541_RS05440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AV541_RS05445 PF00677 Lumazine binding domain AV541_RS05450 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AV541_RS05450 PF00925 GTP cyclohydrolase II AV541_RS05460 PF03448 MgtE intracellular N domain AV541_RS05460 PF01769 Divalent cation transporter AV541_RS05460 PF00571 CBS domain AV541_RS05465 PF03747 ADP-ribosylglycohydrolase AV541_RS05470 PF02547 Queuosine biosynthesis protein AV541_RS05480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV541_RS05480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV541_RS05480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV541_RS05480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV541_RS05490 PF01205 Uncharacterized protein family UPF0029 AV541_RS05505 PF12127 SigmaW regulon antibacterial AV541_RS05520 PF02130 Uncharacterized protein family UPF0054 AV541_RS05525 PF01219 Prokaryotic diacylglycerol kinase AV541_RS05535 PF01272 Transcription elongation factor, GreA/GreB, C-term AV541_RS05535 PF03449 Transcription elongation factor, N-terminal AV541_RS05540 PF01336 OB-fold nucleic acid binding domain AV541_RS05540 PF00152 tRNA synthetases class II (D, K and N) AV541_RS05545 PF01545 Cation efflux family AV541_RS05545 PF16916 Dimerisation domain of Zinc Transporter AV541_RS05550 PF01642 Methylmalonyl-CoA mutase AV541_RS05550 PF02310 B12 binding domain AV541_RS05555 PF02310 B12 binding domain AV541_RS05565 PF02978 Signal peptide binding domain AV541_RS05565 PF00448 SRP54-type protein, GTPase domain AV541_RS05565 PF02881 SRP54-type protein, helical bundle domain AV541_RS05570 PF00886 Ribosomal protein S16 AV541_RS05580 PF01782 RimM N-terminal domain AV541_RS05580 PF05239 PRC-barrel domain AV541_RS05585 PF01746 tRNA (Guanine-1)-methyltransferase AV541_RS05590 PF01245 Ribosomal protein L19 AV541_RS05595 PF00072 Response regulator receiver domain AV541_RS05595 PF00196 Bacterial regulatory proteins, luxR family AV541_RS05605 PF00581 Rhodanese-like domain AV541_RS05630 PF00440 Bacterial regulatory proteins, tetR family AV541_RS05635 PF12704 MacB-like periplasmic core domain AV541_RS05635 PF02687 FtsX-like permease family AV541_RS05635 PF00005 ABC transporter AV541_RS05640 PF00005 ABC transporter AV541_RS05645 PF13533 Biotin-lipoyl like AV541_RS05665 PF00072 Response regulator receiver domain AV541_RS05665 PF00486 Transcriptional regulatory protein, C terminal AV541_RS05685 PF13089 Polyphosphate kinase N-terminal domain AV541_RS05685 PF17941 Polyphosphate kinase C-terminal domain 1 AV541_RS05685 PF13090 Polyphosphate kinase C-terminal domain 2 AV541_RS05685 PF02503 Polyphosphate kinase middle domain AV541_RS05690 PF00171 Aldehyde dehydrogenase family AV541_RS05695 PF01966 HD domain AV541_RS05705 PF00294 pfkB family carbohydrate kinase AV541_RS05720 PF01047 MarR family AV541_RS05735 PF02803 Thiolase, C-terminal domain AV541_RS05735 PF00108 Thiolase, N-terminal domain AV541_RS05750 PF02445 Quinolinate synthetase A protein AV541_RS05755 PF00890 FAD binding domain AV541_RS05755 PF02910 Fumarate reductase flavoprotein C-term AV541_RS05765 PF01638 HxlR-like helix-turn-helix AV541_RS05770 PF01950 Fructose-1,6-bisphosphatase AV541_RS05780 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS05785 PF08402 TOBE domain AV541_RS05785 PF00005 ABC transporter AV541_RS05790 PF02899 Phage integrase, N-terminal SAM-like domain AV541_RS05790 PF00589 Phage integrase family AV541_RS05795 PF17932 Tetracyclin repressor-like, C-terminal domain AV541_RS05795 PF00440 Bacterial regulatory proteins, tetR family AV541_RS05800 PF05138 Phenylacetic acid catabolic protein AV541_RS05830 PF03746 LamB/YcsF family AV541_RS05860 PF00501 AMP-binding enzyme AV541_RS05860 PF14535 AMP-binding enzyme C-terminal domain AV541_RS05865 PF03061 Thioesterase superfamily AV541_RS05875 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV541_RS05875 PF00005 ABC transporter AV541_RS05880 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV541_RS05880 PF00005 ABC transporter AV541_RS05885 PF02653 Branched-chain amino acid transport system / permease component AV541_RS05895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV541_RS05900 PF01613 Flavin reductase like domain AV541_RS05905 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AV541_RS05905 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AV541_RS05910 PF00171 Aldehyde dehydrogenase family AV541_RS05915 PF01557 Fumarylacetoacetate (FAA) hydrolase family AV541_RS05920 PF00701 Dihydrodipicolinate synthetase family AV541_RS05945 PF00005 ABC transporter AV541_RS05955 PF02645 Uncharacterised protein, DegV family COG1307 AV541_RS05960 PF02645 Uncharacterised protein, DegV family COG1307 AV541_RS05970 PF00487 Fatty acid desaturase AV541_RS05975 PF00121 Triosephosphate isomerase AV541_RS05995 PF01797 Transposase IS200 like AV541_RS06045 PF00005 ABC transporter AV541_RS06110 PF00893 Small Multidrug Resistance protein AV541_RS06115 PF00202 Aminotransferase class-III AV541_RS06120 PF03471 Transporter associated domain AV541_RS06120 PF00999 Sodium/hydrogen exchanger family AV541_RS06125 PF01926 50S ribosome-binding GTPase AV541_RS06125 PF10396 GTP-binding protein TrmE N-terminus AV541_RS06125 PF12631 MnmE helical domain AV541_RS06130 PF01808 AICARFT/IMPCHase bienzyme AV541_RS06130 PF02142 MGS-like domain AV541_RS06135 PF01467 Cytidylyltransferase-like AV541_RS06155 PF01121 Dephospho-CoA kinase AV541_RS06160 PF01743 Poly A polymerase head domain AV541_RS06160 PF12627 Probable RNA and SrmB- binding site of polymerase A AV541_RS06160 PF01966 HD domain AV541_RS06165 PF01875 Memo-like protein AV541_RS06170 PF08206 Ribonuclease B OB domain AV541_RS06170 PF17876 Cold shock domain AV541_RS06170 PF00773 RNB domain AV541_RS06170 PF00575 S1 RNA binding domain AV541_RS06185 PF02033 Ribosome-binding factor A AV541_RS06190 PF00162 Phosphoglycerate kinase AV541_RS06195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AV541_RS06195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV541_RS06210 PF00795 Carbon-nitrogen hydrolase AV541_RS06210 PF00583 Acetyltransferase (GNAT) family AV541_RS06215 PF01668 SmpB protein AV541_RS06220 PF01520 N-acetylmuramoyl-L-alanine amidase AV541_RS06220 PF11741 AMIN domain AV541_RS06250 PF04298 Putative neutral zinc metallopeptidase AV541_RS06255 PF00582 Universal stress protein family AV541_RS06260 PF01430 Hsp33 protein AV541_RS06265 PF01406 tRNA synthetases class I (C) catalytic domain AV541_RS06265 PF09190 DALR domain AV541_RS06270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV541_RS06270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV541_RS06270 PF02770 Acyl-CoA dehydrogenase, middle domain AV541_RS06275 PF00108 Thiolase, N-terminal domain AV541_RS06275 PF02803 Thiolase, C-terminal domain AV541_RS06280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV541_RS06280 PF00378 Enoyl-CoA hydratase/isomerase AV541_RS06280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV541_RS06290 PF02645 Uncharacterised protein, DegV family COG1307 AV541_RS06295 PF01470 Pyroglutamyl peptidase AV541_RS06300 PF13439 Glycosyltransferase Family 4 AV541_RS06300 PF00534 Glycosyl transferases group 1 AV541_RS06310 PF13439 Glycosyltransferase Family 4 AV541_RS06310 PF00534 Glycosyl transferases group 1 AV541_RS06315 PF00535 Glycosyl transferase family 2 AV541_RS06325 PF01522 Polysaccharide deacetylase AV541_RS06335 PF04474 Protein of unknown function (DUF554) AV541_RS06340 PF02686 Glu-tRNAGln amidotransferase C subunit AV541_RS06345 PF02403 Seryl-tRNA synthetase N-terminal domain AV541_RS06345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV541_RS06350 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AV541_RS06350 PF13378 Enolase C-terminal domain-like AV541_RS06370 PF07736 Chorismate mutase type I AV541_RS06385 PF00171 Aldehyde dehydrogenase family AV541_RS06395 PF00293 NUDIX domain AV541_RS06400 PF00202 Aminotransferase class-III AV541_RS06410 PF00318 Ribosomal protein S2 AV541_RS06415 PF00889 Elongation factor TS AV541_RS06420 PF00696 Amino acid kinase family AV541_RS06425 PF01765 Ribosome recycling factor AV541_RS06435 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AV541_RS06435 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AV541_RS06435 PF13288 DXP reductoisomerase C-terminal domain AV541_RS06440 PF17820 PDZ domain AV541_RS06440 PF02163 Peptidase family M50 AV541_RS06445 PF00535 Glycosyl transferase family 2 AV541_RS06455 PF03807 NADP oxidoreductase coenzyme F420-dependent AV541_RS06455 PF14748 Pyrroline-5-carboxylate reductase dimerisation AV541_RS06460 PF01029 NusB family AV541_RS06460 PF01189 16S rRNA methyltransferase RsmB/F AV541_RS06465 PF04232 Stage V sporulation protein S (SpoVS) AV541_RS06475 PF02631 RecX family AV541_RS06505 PF04293 SpoVR like protein AV541_RS06510 PF08534 Redoxin AV541_RS06515 PF00581 Rhodanese-like domain AV541_RS06525 PF00753 Metallo-beta-lactamase superfamily AV541_RS06530 PF00581 Rhodanese-like domain AV541_RS06540 PF01261 Xylose isomerase-like TIM barrel AV541_RS06545 PF02163 Peptidase family M50 AV541_RS06555 PF12627 Probable RNA and SrmB- binding site of polymerase A AV541_RS06555 PF01743 Poly A polymerase head domain AV541_RS06555 PF02272 DHHA1 domain AV541_RS06555 PF01368 DHH family AV541_RS06555 PF00571 CBS domain AV541_RS06580 PF00571 CBS domain AV541_RS06595 PF01580 FtsK/SpoIIIE family AV541_RS06595 PF09397 Ftsk gamma domain AV541_RS06595 PF17854 FtsK alpha domain AV541_RS06605 PF17284 Spermidine synthase tetramerisation domain AV541_RS06610 PF13462 Thioredoxin AV541_RS06615 PF02254 TrkA-N domain AV541_RS06615 PF00999 Sodium/hydrogen exchanger family AV541_RS06620 PF01709 Transcriptional regulator AV541_RS06630 PF00474 Sodium:solute symporter family AV541_RS06650 PF00512 His Kinase A (phospho-acceptor) domain AV541_RS06650 PF01627 Hpt domain AV541_RS06650 PF00072 Response regulator receiver domain AV541_RS06650 PF00672 HAMP domain AV541_RS06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV541_RS06650 PF17149 Periplasmic sensor domain found in signal transduction proteins AV541_RS06655 PF00072 Response regulator receiver domain AV541_RS06655 PF00486 Transcriptional regulatory protein, C terminal AV541_RS06665 PF02843 Phosphoribosylglycinamide synthetase, C domain AV541_RS06665 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AV541_RS06665 PF02844 Phosphoribosylglycinamide synthetase, N domain AV541_RS06680 PF01557 Fumarylacetoacetate (FAA) hydrolase family AV541_RS06685 PF02660 Glycerol-3-phosphate acyltransferase AV541_RS06690 PF00356 Bacterial regulatory proteins, lacI family AV541_RS06705 PF04055 Radical SAM superfamily AV541_RS06710 PF02621 Menaquinone biosynthesis AV541_RS06715 PF04264 YceI-like domain AV541_RS06720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV541_RS06725 PF00793 DAHP synthetase I family AV541_RS06725 PF18152 DAHP synthase ferredoxin-like domain AV541_RS06730 PF01842 ACT domain AV541_RS06730 PF02153 Prephenate dehydrogenase AV541_RS06775 PF00583 Acetyltransferase (GNAT) family AV541_RS06815 PF01925 Sulfite exporter TauE/SafE AV541_RS06825 PF00156 Phosphoribosyl transferase domain AV541_RS06830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AV541_RS06830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AV541_RS06835 PF01850 PIN domain AV541_RS06840 PF01979 Amidohydrolase family AV541_RS06850 PF01180 Dihydroorotate dehydrogenase AV541_RS06865 PF00005 ABC transporter AV541_RS06870 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS06875 PF00004 ATPase family associated with various cellular activities (AAA) AV541_RS06875 PF02190 ATP-dependent protease La (LON) substrate-binding domain AV541_RS06875 PF05362 Lon protease (S16) C-terminal proteolytic domain AV541_RS06885 PF05922 Peptidase inhibitor I9 AV541_RS06885 PF00082 Subtilase family AV541_RS06920 PF00561 alpha/beta hydrolase fold AV541_RS06935 PF12146 Serine aminopeptidase, S33 AV541_RS06935 PF13026 Protein of unknown function (DUF3887) AV541_RS06945 PF02742 Iron dependent repressor, metal binding and dimerisation domain AV541_RS06945 PF18357 Diphteria toxin repressor SH3 domain AV541_RS06945 PF01325 Iron dependent repressor, N-terminal DNA binding domain AV541_RS06955 PF00144 Beta-lactamase AV541_RS06975 PF00005 ABC transporter AV541_RS06995 PF00512 His Kinase A (phospho-acceptor) domain AV541_RS06995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV541_RS06995 PF00672 HAMP domain AV541_RS07000 PF03315 Serine dehydratase beta chain AV541_RS07000 PF01842 ACT domain AV541_RS07010 PF00701 Dihydrodipicolinate synthetase family AV541_RS07020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AV541_RS07025 PF00571 CBS domain AV541_RS07025 PF03471 Transporter associated domain AV541_RS07025 PF01595 Cyclin M transmembrane N-terminal domain AV541_RS07050 PF00873 AcrB/AcrD/AcrF family AV541_RS07065 PF00694 Aconitase C-terminal domain AV541_RS07065 PF00330 Aconitase family (aconitate hydratase) AV541_RS07080 PF00082 Subtilase family AV541_RS07110 PF03167 Uracil DNA glycosylase superfamily AV541_RS07120 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS07125 PF00005 ABC transporter AV541_RS07140 PF02938 GAD domain AV541_RS07140 PF01336 OB-fold nucleic acid binding domain AV541_RS07140 PF00152 tRNA synthetases class II (D, K and N) AV541_RS07155 PF01336 OB-fold nucleic acid binding domain AV541_RS07155 PF00152 tRNA synthetases class II (D, K and N) AV541_RS07160 PF01174 SNO glutamine amidotransferase family AV541_RS07165 PF00403 Heavy-metal-associated domain AV541_RS07170 PF01022 Bacterial regulatory protein, arsR family AV541_RS07175 PF01680 SOR/SNZ family AV541_RS07180 PF01551 Peptidase family M23 AV541_RS07180 PF01464 Transglycosylase SLT domain AV541_RS07180 PF10145 Phage-related minor tail protein AV541_RS07190 PF02576 RimP N-terminal domain AV541_RS07190 PF17384 RimP C-terminal SH3 domain AV541_RS07195 PF08529 NusA N-terminal domain AV541_RS07195 PF13184 NusA-like KH domain AV541_RS07195 PF00575 S1 RNA binding domain AV541_RS07205 PF11987 Translation-initiation factor 2 AV541_RS07205 PF04760 Translation initiation factor IF-2, N-terminal region AV541_RS07205 PF00009 Elongation factor Tu GTP binding domain AV541_RS07215 PF02355 Protein export membrane protein AV541_RS07215 PF07549 SecD/SecF GG Motif AV541_RS07225 PF00528 Binding-protein-dependent transport system inner membrane component AV541_RS07250 PF08543 Phosphomethylpyrimidine kinase AV541_RS07255 PF07690 Major Facilitator Superfamily AV541_RS07265 PF01266 FAD dependent oxidoreductase AV541_RS07265 PF05690 Thiazole biosynthesis protein ThiG AV541_RS07275 PF02597 ThiS family AV541_RS07280 PF02581 Thiamine monophosphate synthase AV541_RS07290 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AV541_RS07290 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AV541_RS07295 PF02602 Uroporphyrinogen-III synthase HemD AV541_RS07300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV541_RS07300 PF14824 Sirohaem biosynthesis protein central AV541_RS07300 PF10414 Sirohaem synthase dimerisation region AV541_RS07305 PF01507 Phosphoadenosine phosphosulfate reductase family AV541_RS07310 PF01925 Sulfite exporter TauE/SafE AV541_RS07315 PF10414 Sirohaem synthase dimerisation region AV541_RS07315 PF14824 Sirohaem biosynthesis protein central AV541_RS07315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV541_RS07320 PF01747 ATP-sulfurylase AV541_RS07320 PF14306 PUA-like domain AV541_RS07325 PF00296 Luciferase-like monooxygenase AV541_RS07330 PF08240 Alcohol dehydrogenase GroES-like domain AV541_RS07330 PF00107 Zinc-binding dehydrogenase AV541_RS07335 PF02423 Ornithine cyclodeaminase/mu-crystallin family AV541_RS07350 PF04452 RNA methyltransferase AV541_RS07365 PF10609 NUBPL iron-transfer P-loop NTPase AV541_RS07365 PF01883 Iron-sulfur cluster assembly protein AV541_RS07395 PF03275 UDP-galactopyranose mutase AV541_RS07430 PF01966 HD domain AV541_RS07430 PF01909 Nucleotidyltransferase domain AV541_RS07430 PF08335 GlnD PII-uridylyltransferase AV541_RS07470 PF00227 Proteasome subunit AV541_RS07485 PF02416 mttA/Hcf106 family AV541_RS07510 PF01741 Large-conductance mechanosensitive channel, MscL AV541_RS07515 PF00311 Phosphoenolpyruvate carboxylase AV541_RS07535 PF03449 Transcription elongation factor, N-terminal AV541_RS07535 PF01272 Transcription elongation factor, GreA/GreB, C-term AV541_RS07545 PF00425 chorismate binding enzyme AV541_RS07545 PF04715 Anthranilate synthase component I, N terminal region AV541_RS07550 PF02965 Vitamin B12 dependent methionine synthase, activation domain AV541_RS07550 PF02574 Homocysteine S-methyltransferase AV541_RS07550 PF02607 B12 binding domain AV541_RS07550 PF02310 B12 binding domain AV541_RS07550 PF00809 Pterin binding enzyme AV541_RS07565 PF00574 Clp protease AV541_RS07570 PF05697 Bacterial trigger factor protein (TF) AV541_RS07570 PF05698 Bacterial trigger factor protein (TF) C-terminus AV541_RS07595 PF06153 Cyclic-di-AMP receptor AV541_RS07605 PF08704 tRNA methyltransferase complex GCD14 subunit AV541_RS07610 PF05670 NFACT protein RNA binding domain AV541_RS07615 PF04055 Radical SAM superfamily AV541_RS07615 PF06968 Biotin and Thiamin Synthesis associated domain AV541_RS07620 PF02261 Aspartate decarboxylase AV541_RS07630 PF00440 Bacterial regulatory proteins, tetR family AV541_RS07630 PF17932 Tetracyclin repressor-like, C-terminal domain AV541_RS07640 PF01575 MaoC like domain AV541_RS07640 PF00171 Aldehyde dehydrogenase family AV541_RS07645 PF00501 AMP-binding enzyme AV541_RS07645 PF13193 AMP-binding enzyme C-terminal domain AV541_RS07665 PF01208 Uroporphyrinogen decarboxylase (URO-D) AV541_RS07670 PF00762 Ferrochelatase AV541_RS07690 PF01297 Zinc-uptake complex component A periplasmic AV541_RS07695 PF10509 Galactokinase galactose-binding signature AV541_RS07695 PF08544 GHMP kinases C terminal AV541_RS07695 PF00288 GHMP kinases N terminal domain AV541_RS07705 PF00582 Universal stress protein family AV541_RS07710 PF01699 Sodium/calcium exchanger protein AV541_RS07715 PF01368 DHH family AV541_RS07715 PF01743 Poly A polymerase head domain AV541_RS07715 PF12627 Probable RNA and SrmB- binding site of polymerase A AV541_RS07715 PF00571 CBS domain AV541_RS07715 PF02272 DHHA1 domain AV541_RS07720 PF00689 Cation transporting ATPase, C-terminus AV541_RS07720 PF00690 Cation transporter/ATPase, N-terminus AV541_RS07735 PF16363 GDP-mannose 4,6 dehydratase AV541_RS07740 PF13458 Periplasmic binding protein AV541_RS07755 PF00005 ABC transporter AV541_RS07755 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV541_RS07765 PF11862 Domain of unknown function (DUF3382) AV541_RS07765 PF02653 Branched-chain amino acid transport system / permease component AV541_RS07840 PF00107 Zinc-binding dehydrogenase AV541_RS07840 PF08240 Alcohol dehydrogenase GroES-like domain AV541_RS07850 PF00708 Acylphosphatase AV541_RS07855 PF13167 GTP-binding GTPase N-terminal AV541_RS07855 PF16360 GTP-binding GTPase Middle Region AV541_RS07855 PF01926 50S ribosome-binding GTPase AV541_RS07870 PF01168 Alanine racemase, N-terminal domain AV541_RS07875 PF01048 Phosphorylase superfamily AV541_RS07895 PF00206 Lyase AV541_RS07895 PF10415 Fumarase C C-terminus AV541_RS07905 PF01048 Phosphorylase superfamily AV541_RS07920 PF00453 Ribosomal protein L20 AV541_RS07925 PF01632 Ribosomal protein L35 AV541_RS07940 PF00749 tRNA synthetases class I (E and Q), catalytic domain AV541_RS07940 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AV541_RS07955 PF01479 S4 domain AV541_RS07955 PF01728 FtsJ-like methyltransferase AV541_RS07960 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV541_RS07960 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV541_RS07970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV541_RS07970 PF03129 Anticodon binding domain AV541_RS07975 PF10431 C-terminal, D2-small domain, of ClpB protein AV541_RS07975 PF02861 Clp amino terminal domain, pathogenicity island component AV541_RS07975 PF17871 AAA lid domain AV541_RS07975 PF07724 AAA domain (Cdc48 subfamily) AV541_RS07975 PF00004 ATPase family associated with various cellular activities (AAA) AV541_RS07980 PF18073 Rubredoxin metal binding domain AV541_RS07990 PF01861 Branched-chain polyamine synthase A C-terminal domain AV541_RS07995 PF00549 CoA-ligase AV541_RS07995 PF08442 ATP-grasp domain AV541_RS08015 PF13840 ACT domain AV541_RS08015 PF00696 Amino acid kinase family AV541_RS08015 PF01842 ACT domain AV541_RS08025 PF00140 Sigma-70 factor, region 1.2 AV541_RS08025 PF04542 Sigma-70 region 2 AV541_RS08025 PF04539 Sigma-70 region 3 AV541_RS08025 PF04545 Sigma-70, region 4 AV541_RS08040 PF01979 Amidohydrolase family AV541_RS08050 PF00293 NUDIX domain AV541_RS08060 PF02347 Glycine cleavage system P-protein AV541_RS08065 PF02347 Glycine cleavage system P-protein AV541_RS08070 PF01597 Glycine cleavage H-protein AV541_RS08095 PF01883 Iron-sulfur cluster assembly protein AV541_RS08100 PF03741 Integral membrane protein TerC family AV541_RS08125 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AV541_RS08125 PF02222 ATP-grasp domain AV541_RS08140 PF01588 Putative tRNA binding domain AV541_RS08145 PF13358 DDE superfamily endonuclease AV541_RS08160 PF13411 MerR HTH family regulatory protein AV541_RS08165 PF09339 IclR helix-turn-helix domain AV541_RS08165 PF01614 Bacterial transcriptional regulator AV541_RS08170 PF01274 Malate synthase AV541_RS08185 PF02754 Cysteine-rich domain AV541_RS08185 PF13183 4Fe-4S dicluster domain AV541_RS08200 PF06969 HemN C-terminal domain AV541_RS08200 PF04055 Radical SAM superfamily AV541_RS08210 PF11497 NADH-quinone oxidoreductase chain 15 AV541_RS08270 PF08331 Domain of unknown function (DUF1730) AV541_RS08280 PF00795 Carbon-nitrogen hydrolase AV541_RS08290 PF01209 ubiE/COQ5 methyltransferase family AV541_RS08295 PF01209 ubiE/COQ5 methyltransferase family AV541_RS08305 PF00571 CBS domain AV541_RS08305 PF00005 ABC transporter AV541_RS08310 PF00982 Glycosyltransferase family 20 AV541_RS08315 PF03632 Glycosyl hydrolase family 65 central catalytic domain AV541_RS08315 PF03633 Glycosyl hydrolase family 65, C-terminal domain AV541_RS08315 PF03636 Glycosyl hydrolase family 65, N-terminal domain AV541_RS08315 PF02358 Trehalose-phosphatase AV541_RS08330 PF02597 ThiS family AV541_RS08340 PF00571 CBS domain AV541_RS08345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV541_RS08345 PF00005 ABC transporter AV541_RS08365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV541_RS08370 PF00107 Zinc-binding dehydrogenase AV541_RS08370 PF08240 Alcohol dehydrogenase GroES-like domain AV541_RS08375 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_RS08420 PF02224 Cytidylate kinase AV541_RS08425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AV541_RS08430 PF00266 Aminotransferase class-V AV541_RS08440 PF00950 ABC 3 transport family AV541_RS08445 PF00005 ABC transporter AV541_RS08470 PF00468 Ribosomal protein L34 AV541_RS08475 PF00825 Ribonuclease P AV541_RS08480 PF01809 Putative membrane protein insertion efficiency factor AV541_RS08485 PF02096 60Kd inner membrane protein AV541_RS08495 PF05175 Methyltransferase small domain AV541_RS08495 PF17827 PrmC N-terminal domain AV541_RS08505 PF00005 ABC transporter AV541_RS08520 PF02881 SRP54-type protein, helical bundle domain AV541_RS08520 PF00448 SRP54-type protein, GTPase domain AV541_RS08525 PF02600 Disulfide bond formation protein DsbB AV541_RS08550 PF00117 Glutamine amidotransferase class-I AV541_RS08555 PF00475 Imidazoleglycerol-phosphate dehydratase AV541_RS08560 PF00155 Aminotransferase class I and II AV541_RS08565 PF00881 Nitroreductase family AV541_RS08605 PF01783 Ribosomal L32p protein family AV541_RS08610 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AV541_RS08610 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AV541_RS08625 PF00550 Phosphopantetheine attachment site AV541_RS08630 PF00109 Beta-ketoacyl synthase, N-terminal domain AV541_RS08630 PF02801 Beta-ketoacyl synthase, C-terminal domain AV541_RS08635 PF13286 Phosphohydrolase-associated domain AV541_RS08635 PF01966 HD domain AV541_RS08640 PF00155 Aminotransferase class I and II AV541_RS08650 PF01555 DNA methylase AV541_RS08655 PF01479 S4 domain AV541_RS08655 PF00849 RNA pseudouridylate synthase AV541_RS08660 PF02548 Ketopantoate hydroxymethyltransferase AV541_RS08665 PF17864 RuvB AAA lid domain AV541_RS08665 PF05491 RuvB C-terminal winged helix domain AV541_RS08665 PF05496 Holliday junction DNA helicase RuvB P-loop domain AV541_RS08675 PF17862 AAA+ lid domain AV541_RS08675 PF00004 ATPase family associated with various cellular activities (AAA) AV541_RS08675 PF01434 Peptidase family M41 AV541_RS08675 PF06480 FtsH Extracellular AV541_RS08730 PF00890 FAD binding domain AV541_RS08740 PF01817 Chorismate mutase type II AV541_RS08740 PF00793 DAHP synthetase I family AV541_RS08745 PF00902 Sec-independent protein translocase protein (TatC) AV541_RS08755 PF14602 Hexapeptide repeat of succinyl-transferase AV541_RS08755 PF12804 MobA-like NTP transferase domain AV541_RS08755 PF00132 Bacterial transferase hexapeptide (six repeats) AV541_RS08760 PF01790 Prolipoprotein diacylglyceryl transferase AV541_RS08800 PF00814 Glycoprotease family AV541_RS08805 PF02525 Flavodoxin-like fold AV541_RS08810 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AV541_RS08815 PF02021 Uncharacterised protein family UPF0102 AV541_RS08820 PF03793 PASTA domain AV541_RS08820 PF00069 Protein kinase domain AV541_RS08825 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV541_RS08850 PF04055 Radical SAM superfamily AV541_RS08850 PF06463 Molybdenum Cofactor Synthesis C AV541_RS08875 PF02401 LytB protein AV541_RS08895 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AV541_RS08900 PF00486 Transcriptional regulatory protein, C terminal AV541_RS08900 PF00072 Response regulator receiver domain AV541_RS08910 PF00483 Nucleotidyl transferase AV541_RS08915 PF05362 Lon protease (S16) C-terminal proteolytic domain AV541_RS08915 PF13654 AAA domain AV541_RS08920 PF01804 Penicillin amidase AV541_RS08935 PF00248 Aldo/keto reductase family AV541_RS08980 PF15937 prlF antitoxin for toxin YhaV_toxin AV541_RS09020 PF00830 Ribosomal L28 family AV541_RS09025 PF01252 Signal peptidase (SPase) II AV541_RS09040 PF08780 Nucleotidyltransferase substrate binding protein like AV541_RS09045 PF00781 Diacylglycerol kinase catalytic domain AV541_RS09060 PF00850 Histone deacetylase domain AV541_RS09070 PF00588 SpoU rRNA Methylase family AV541_RS09075 PF00270 DEAD/DEAH box helicase AV541_RS09075 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AV541_RS09075 PF17191 RecG wedge domain AV541_RS09080 PF00909 Ammonium Transporter Family AV541_RS09085 PF00543 Nitrogen regulatory protein P-II AV541_RS09090 PF01628 HrcA protein C terminal domain AV541_RS09095 PF02391 MoaE protein AV541_RS09170 PF01396 Topoisomerase DNA binding C4 zinc finger AV541_RS09170 PF01751 Toprim domain AV541_RS09170 PF01131 DNA topoisomerase AV541_RS09185 PF00459 Inositol monophosphatase family AV541_RS09215 PF04098 Rad52/22 family double-strand break repair protein AV541_RS09225 PF00398 Ribosomal RNA adenine dimethylase AV541_RS09230 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AV541_RS09235 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AV541_RS09240 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AV541_RS09245 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AV541_RS09255 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AV541_RS09255 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AV541_RS09255 PF10531 SLBB domain AV541_RS09265 PF00146 NADH dehydrogenase AV541_RS09270 PF12838 4Fe-4S dicluster domain AV541_RS09275 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AV541_RS09280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AV541_RS09295 PF00361 Proton-conducting membrane transporter AV541_RS09300 PF05746 DALR anticodon binding domain AV541_RS09300 PF03485 Arginyl tRNA synthetase N terminal domain AV541_RS09300 PF00750 tRNA synthetases class I (R) AV541_RS09305 PF13180 PDZ domain AV541_RS09310 PF08245 Mur ligase middle domain AV541_RS09310 PF01225 Mur ligase family, catalytic domain AV541_RS09310 PF02875 Mur ligase family, glutamate ligase domain AV541_RS09330 PF03060 Nitronate monooxygenase AV541_RS09360 PF00834 Ribulose-phosphate 3 epimerase family AV541_RS09365 PF00456 Transketolase, thiamine diphosphate binding domain AV541_RS09365 PF02780 Transketolase, C-terminal domain AV541_RS09365 PF02779 Transketolase, pyrimidine binding domain AV541_RS09375 PF14659 Phage integrase, N-terminal SAM-like domain AV541_RS09375 PF00589 Phage integrase family AV541_RS09390 PF01555 DNA methylase AV541_RS09390 PF18273 Type III R-M EcoP15I C-terminal domain AV541_RS09445 PF00271 Helicase conserved C-terminal domain AV541_RS09445 PF00270 DEAD/DEAH box helicase AV541_RS09460 PF00730 HhH-GPD superfamily base excision DNA repair protein AV541_RS09460 PF00633 Helix-hairpin-helix motif AV541_RS09460 PF10576 Iron-sulfur binding domain of endonuclease III AV541_RS09470 PF00005 ABC transporter AV541_RS09500 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase AV541_RS09500 PF01676 Metalloenzyme superfamily AV541_RS09505 PF01368 DHH family AV541_RS09505 PF02272 DHHA1 domain AV541_RS09510 PF00589 Phage integrase family AV541_RS09525 PF12728 Helix-turn-helix domain AV541_RS09580 PF11741 AMIN domain AV541_RS09580 PF01520 N-acetylmuramoyl-L-alanine amidase AV541_RS09680 PF12464 Maltose acetyltransferase AV541_RS09680 PF00132 Bacterial transferase hexapeptide (six repeats) AV541_RS09680 PF14602 Hexapeptide repeat of succinyl-transferase AV541_RS09685 PF01926 50S ribosome-binding GTPase AV541_RS09685 PF07650 KH domain AV541_RS09690 PF17782 DprA winged helix domain AV541_RS09690 PF02481 DNA recombination-mediator protein A AV541_RS09695 PF05067 Manganese containing catalase AV541_RS09705 PF01063 Amino-transferase class IV AV541_RS09720 PF00588 SpoU rRNA Methylase family AV541_RS09720 PF12105 SpoU, rRNA methylase, C-terminal AV541_RS09725 PF01634 ATP phosphoribosyltransferase AV541_RS09735 PF00692 dUTPase AV541_RS09745 PF00583 Acetyltransferase (GNAT) family AV541_RS09750 PF01661 Macro domain AV541_RS09760 PF03477 ATP cone domain AV541_RS09780 PF01042 Endoribonuclease L-PSP AV541_RS09795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AV541_RS09805 PF03462 PCRF domain AV541_RS09805 PF00472 RF-1 domain AV541_RS09810 PF01895 PhoU domain AV541_RS09815 PF00512 His Kinase A (phospho-acceptor) domain AV541_RS09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV541_RS09820 PF00072 Response regulator receiver domain AV541_RS09820 PF00486 Transcriptional regulatory protein, C terminal AV541_RS09825 PF02272 DHHA1 domain AV541_RS09825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AV541_RS09825 PF01411 tRNA synthetases class II (A) AV541_RS09830 PF01479 S4 domain AV541_RS09830 PF00849 RNA pseudouridylate synthase AV541_RS09855 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AV541_RS09855 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AV541_RS09860 PF00294 pfkB family carbohydrate kinase AV541_RS09865 PF08240 Alcohol dehydrogenase GroES-like domain AV541_RS09865 PF00107 Zinc-binding dehydrogenase AV541_RS09870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV541_RS09895 PF00575 S1 RNA binding domain AV541_RS09905 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AV541_RS09920 PF03575 Peptidase family S51 AV541_RS09925 PF00440 Bacterial regulatory proteins, tetR family AV541_RS09925 PF08359 YsiA-like protein, C-terminal region AV541_RS09940 PF00288 GHMP kinases N terminal domain AV541_RS09940 PF08544 GHMP kinases C terminal AV541_RS09945 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AV541_RS09950 PF02673 Bacitracin resistance protein BacA AV541_RS09960 PF00684 DnaJ central domain AV541_RS09960 PF01556 DnaJ C terminal domain AV541_RS09960 PF00226 DnaJ domain AV541_RS09965 PF00313 'Cold-shock' DNA-binding domain AV541_RS10005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV541_RS10005 PF00364 Biotin-requiring enzyme AV541_RS10005 PF02817 e3 binding domain AV541_RS10015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV541_RS10015 PF03466 LysR substrate binding domain AV541_RS10025 PF00334 Nucleoside diphosphate kinase AV541_RS10035 PF02152 Dihydroneopterin aldolase AV541_RS10040 PF00809 Pterin binding enzyme AV541_RS10065 PF03480 Bacterial extracellular solute-binding protein, family 7 AV541_RS10100 PF01078 Magnesium chelatase, subunit ChlI AV541_RS10100 PF13335 Magnesium chelatase, subunit ChlI C-terminal AV541_RS10120 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AV541_RS10120 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AV541_RS10125 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AV541_RS10130 PF02233 NAD(P) transhydrogenase beta subunit AV541_RS10135 PF00466 Ribosomal protein L10 AV541_RS10140 PF00542 Ribosomal protein L7/L12 C-terminal domain AV541_RS10140 PF16320 Ribosomal protein L7/L12 dimerisation domain AV541_RS10150 PF07501 G5 domain AV541_RS10150 PF03990 G5-linked-Ubiquitin-like domain AV541_RS10150 PF06725 3D domain AV541_RS10160 PF02734 DAK2 domain AV541_RS10160 PF13684 Dihydroxyacetone kinase family AV541_RS10170 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AV541_RS10170 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AV541_RS10180 PF00378 Enoyl-CoA hydratase/isomerase AV541_RS10190 PF00156 Phosphoribosyl transferase domain AV541_RS10200 PF00709 Adenylosuccinate synthetase AV541_RS10535 PF02779 Transketolase, pyrimidine binding domain AV541_RS10535 PF16870 2-oxoglutarate dehydrogenase C-terminal AV541_RS10535 PF00676 Dehydrogenase E1 component AV541_RS10535 PF16078 2-oxoglutarate dehydrogenase N-terminus AV541_RS10600 PF04551 GcpE protein AV541_RS10635 PF01040 UbiA prenyltransferase family AV541_RS10635 PF02628 Cytochrome oxidase assembly protein AV541_RS10640 PF02628 Cytochrome oxidase assembly protein AV541_RS10640 PF01040 UbiA prenyltransferase family AV541_RS10900 PF01547 Bacterial extracellular solute-binding protein AV541_RS10945 PF00437 Type II/IV secretion system protein