##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM1997431v1 #!genome-build-accession NCBI_Assembly:GCF_019974315.1 #!annotation-date 12/02/2022 04:10:07 #!annotation-source NCBI RefSeq ##sequence-region NZ_AP024926.1 1 1954152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=274 NZ_AP024926.1 RefSeq region 1 1954152 . + . ID=NZ_AP024926.1:1..1954152;Dbxref=taxon:274;Is_circular=true;Name=ANONYMOUS;collected-by=Natsuki Tomariguchi;collection-date=2017-03-20;country=Japan:Arima Hot Spring;gbkey=Src;genome=chromosome;isolation-source=hot spring water;mol_type=genomic DNA;strain=AA1-1 NZ_AP024926.1 RefSeq gene 5 1315 . + . ID=gene-LDO09_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LDO09_RS00005;old_locus_tag=TthAA11_00010 NZ_AP024926.1 Protein Homology CDS 5 1315 . + 0 ID=cds-WP_008633967.1;Parent=gene-LDO09_RS00005;Dbxref=Genbank:WP_008633967.1;Name=WP_008633967.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229057.1;locus_tag=LDO09_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_008633967.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1617 2744 . + . ID=gene-LDO09_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LDO09_RS00010;old_locus_tag=TthAA11_00020 NZ_AP024926.1 Protein Homology CDS 1617 2744 . + 0 ID=cds-WP_143584065.1;Parent=gene-LDO09_RS00010;Dbxref=Genbank:WP_143584065.1;Name=WP_143584065.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633969.1;locus_tag=LDO09_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_143584065.1;transl_table=11 NZ_AP024926.1 RefSeq gene 2797 4065 . + . ID=gene-LDO09_RS00015;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LDO09_RS00015;old_locus_tag=TthAA11_00030 NZ_AP024926.1 Protein Homology CDS 2797 4065 . + 0 ID=cds-WP_143584067.1;Parent=gene-LDO09_RS00015;Dbxref=Genbank:WP_143584067.1;Name=WP_143584067.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014514424.1;locus_tag=LDO09_RS00015;product=phosphopyruvate hydratase;protein_id=WP_143584067.1;transl_table=11 NZ_AP024926.1 RefSeq gene 4052 5476 . + . ID=gene-LDO09_RS00020;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LDO09_RS00020;old_locus_tag=TthAA11_00040 NZ_AP024926.1 Protein Homology CDS 4052 5476 . + 0 ID=cds-WP_143584069.1;Parent=gene-LDO09_RS00020;Dbxref=Genbank:WP_143584069.1;Name=WP_143584069.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628808.1;locus_tag=LDO09_RS00020;product=pyruvate kinase;protein_id=WP_143584069.1;transl_table=11 NZ_AP024926.1 RefSeq gene 5477 6457 . - . ID=gene-LDO09_RS00025;Name=LDO09_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00025;old_locus_tag=TthAA11_00050 NZ_AP024926.1 Protein Homology CDS 5477 6457 . - 0 ID=cds-WP_143584071.1;Parent=gene-LDO09_RS00025;Dbxref=Genbank:WP_143584071.1;Name=WP_143584071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227632.1;locus_tag=LDO09_RS00025;product=hypothetical protein;protein_id=WP_143584071.1;transl_table=11 NZ_AP024926.1 RefSeq gene 6454 7068 . - . ID=gene-LDO09_RS00030;Name=LDO09_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00030;old_locus_tag=TthAA11_00060 NZ_AP024926.1 Protein Homology CDS 6454 7068 . - 0 ID=cds-WP_143584073.1;Parent=gene-LDO09_RS00030;Dbxref=Genbank:WP_143584073.1;Name=WP_143584073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173984.1;locus_tag=LDO09_RS00030;product=MBL fold metallo-hydrolase;protein_id=WP_143584073.1;transl_table=11 NZ_AP024926.1 RefSeq gene 7055 8902 . - . ID=gene-LDO09_RS00035;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=LDO09_RS00035;old_locus_tag=TthAA11_00070 NZ_AP024926.1 Protein Homology CDS 7055 8902 . - 0 ID=cds-WP_143584075.1;Parent=gene-LDO09_RS00035;Dbxref=Genbank:WP_143584075.1;Name=WP_143584075.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628811.1;locus_tag=LDO09_RS00035;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_143584075.1;transl_table=11 NZ_AP024926.1 RefSeq gene 8911 9555 . - . ID=gene-LDO09_RS00040;Name=LDO09_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00040;old_locus_tag=TthAA11_00080 NZ_AP024926.1 Protein Homology CDS 8911 9555 . - 0 ID=cds-WP_143584077.1;Parent=gene-LDO09_RS00040;Dbxref=Genbank:WP_143584077.1;Name=WP_143584077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628812.1;locus_tag=LDO09_RS00040;product=hypothetical protein;protein_id=WP_143584077.1;transl_table=11 NZ_AP024926.1 RefSeq gene 9599 10261 . - . ID=gene-LDO09_RS00045;Name=LDO09_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00045;old_locus_tag=TthAA11_00090 NZ_AP024926.1 Protein Homology CDS 9599 10261 . - 0 ID=cds-WP_008633982.1;Parent=gene-LDO09_RS00045;Dbxref=Genbank:WP_008633982.1;Name=WP_008633982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227636.1;locus_tag=LDO09_RS00045;product=PspA/IM30 family protein;protein_id=WP_008633982.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 10643 11327 . + . ID=gene-LDO09_RS00050;Name=LDO09_RS00050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS00050;old_locus_tag=TthAA11_00110;pseudo=true NZ_AP024926.1 Protein Homology CDS 10643 11327 . + 0 ID=cds-LDO09_RS00050;Parent=gene-LDO09_RS00050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS00050;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 11453 14359 . + . ID=gene-LDO09_RS00055;Name=LDO09_RS00055;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO09_RS00055;old_locus_tag=TthAA11_r00010 NZ_AP024926.1 cmsearch rRNA 11453 14359 . + . ID=rna-LDO09_RS00055;Parent=gene-LDO09_RS00055;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS00055;product=23S ribosomal RNA NZ_AP024926.1 cmsearch exon 11453 14359 . + . ID=exon-LDO09_RS00055-1;Parent=rna-LDO09_RS00055;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS00055;product=23S ribosomal RNA NZ_AP024926.1 RefSeq gene 14443 14559 . + . ID=gene-LDO09_RS00060;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LDO09_RS00060;old_locus_tag=TthAA11_r00020 NZ_AP024926.1 cmsearch rRNA 14443 14559 . + . ID=rna-LDO09_RS00060;Parent=gene-LDO09_RS00060;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS00060;product=5S ribosomal RNA NZ_AP024926.1 cmsearch exon 14443 14559 . + . ID=exon-LDO09_RS00060-1;Parent=rna-LDO09_RS00060;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS00060;product=5S ribosomal RNA NZ_AP024926.1 RefSeq gene 14572 14647 . + . ID=gene-LDO09_RS00065;Name=LDO09_RS00065;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS00065;old_locus_tag=TthAA11_t00010 NZ_AP024926.1 tRNAscan-SE tRNA 14572 14647 . + . ID=rna-LDO09_RS00065;Parent=gene-LDO09_RS00065;anticodon=(pos:14605..14607);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00065;product=tRNA-Gly NZ_AP024926.1 tRNAscan-SE exon 14572 14647 . + . ID=exon-LDO09_RS00065-1;Parent=rna-LDO09_RS00065;anticodon=(pos:14605..14607);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00065;product=tRNA-Gly NZ_AP024926.1 RefSeq gene 14683 15315 . - . ID=gene-LDO09_RS00070;Name=LDO09_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00070;old_locus_tag=TthAA11_00120 NZ_AP024926.1 Protein Homology CDS 14683 15315 . - 0 ID=cds-WP_143584081.1;Parent=gene-LDO09_RS00070;Dbxref=Genbank:WP_143584081.1;Name=WP_143584081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173987.1;locus_tag=LDO09_RS00070;product=histidine phosphatase family protein;protein_id=WP_143584081.1;transl_table=11 NZ_AP024926.1 RefSeq gene 15312 16313 . - . ID=gene-LDO09_RS00075;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LDO09_RS00075;old_locus_tag=TthAA11_00130 NZ_AP024926.1 Protein Homology CDS 15312 16313 . - 0 ID=cds-WP_143584083.1;Parent=gene-LDO09_RS00075;Dbxref=Genbank:WP_143584083.1;Name=WP_143584083.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509693.1;locus_tag=LDO09_RS00075;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_143584083.1;transl_table=11 NZ_AP024926.1 RefSeq gene 16319 17728 . - . ID=gene-LDO09_RS00080;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=LDO09_RS00080;old_locus_tag=TthAA11_00140 NZ_AP024926.1 Protein Homology CDS 16319 17728 . - 0 ID=cds-WP_143584085.1;Parent=gene-LDO09_RS00080;Dbxref=Genbank:WP_143584085.1;Name=WP_143584085.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227883.1;locus_tag=LDO09_RS00080;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_143584085.1;transl_table=11 NZ_AP024926.1 RefSeq gene 17739 18824 . - . ID=gene-LDO09_RS00085;Name=LDO09_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00085;old_locus_tag=TthAA11_00150 NZ_AP024926.1 Protein Homology CDS 17739 18824 . - 0 ID=cds-WP_143584087.1;Parent=gene-LDO09_RS00085;Dbxref=Genbank:WP_143584087.1;Name=WP_143584087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173990.1;locus_tag=LDO09_RS00085;product=type IV pilus twitching motility protein PilT;protein_id=WP_143584087.1;transl_table=11 NZ_AP024926.1 RefSeq gene 18837 21503 . - . ID=gene-LDO09_RS00090;Name=pilB;gbkey=Gene;gene=pilB;gene_biotype=protein_coding;locus_tag=LDO09_RS00090;old_locus_tag=TthAA11_00160 NZ_AP024926.1 Protein Homology CDS 18837 21503 . - 0 ID=cds-WP_223968753.1;Parent=gene-LDO09_RS00090;Dbxref=Genbank:WP_223968753.1;Name=WP_223968753.1;gbkey=CDS;gene=pilB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173991.1;locus_tag=LDO09_RS00090;product=type IV pilus assembly ATPase PilB;protein_id=WP_223968753.1;transl_table=11 NZ_AP024926.1 RefSeq gene 21500 21985 . - . ID=gene-LDO09_RS00095;Name=LDO09_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00095;old_locus_tag=TthAA11_00170 NZ_AP024926.1 Protein Homology CDS 21500 21985 . - 0 ID=cds-WP_014628818.1;Parent=gene-LDO09_RS00095;Dbxref=Genbank:WP_014628818.1;Name=WP_014628818.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628818.1;locus_tag=LDO09_RS00095;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_014628818.1;transl_table=11 NZ_AP024926.1 RefSeq gene 22020 22748 . - . ID=gene-LDO09_RS00100;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=LDO09_RS00100;old_locus_tag=TthAA11_00180 NZ_AP024926.1 Protein Homology CDS 22020 22748 . - 0 ID=cds-WP_014628819.1;Parent=gene-LDO09_RS00100;Dbxref=Genbank:WP_014628819.1;Name=WP_014628819.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227882.1;locus_tag=LDO09_RS00100;product=peptidoglycan editing factor PgeF;protein_id=WP_014628819.1;transl_table=11 NZ_AP024926.1 RefSeq gene 22745 23500 . - . ID=gene-LDO09_RS00105;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LDO09_RS00105;old_locus_tag=TthAA11_00190 NZ_AP024926.1 Protein Homology CDS 22745 23500 . - 0 ID=cds-WP_014628820.1;Parent=gene-LDO09_RS00105;Dbxref=Genbank:WP_014628820.1;Name=WP_014628820.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628820.1;locus_tag=LDO09_RS00105;product=5'/3'-nucleotidase SurE;protein_id=WP_014628820.1;transl_table=11 NZ_AP024926.1 RefSeq gene 23559 23765 . - . ID=gene-LDO09_RS00110;Name=LDO09_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00110;old_locus_tag=TthAA11_00200 NZ_AP024926.1 Protein Homology CDS 23559 23765 . - 0 ID=cds-WP_143584091.1;Parent=gene-LDO09_RS00110;Dbxref=Genbank:WP_143584091.1;Name=WP_143584091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1;locus_tag=LDO09_RS00110;product=cold-shock protein;protein_id=WP_143584091.1;transl_table=11 NZ_AP024926.1 RefSeq gene 23865 24554 . - . ID=gene-LDO09_RS00115;Name=LDO09_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00115;old_locus_tag=TthAA11_00210 NZ_AP024926.1 Protein Homology CDS 23865 24554 . - 0 ID=cds-WP_143584079.1;Parent=gene-LDO09_RS00115;Dbxref=Genbank:WP_143584079.1;Name=WP_143584079.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS00115;product=IS5-like element ISTth7 family transposase;protein_id=WP_143584079.1;transl_table=11 NZ_AP024926.1 RefSeq gene 24958 26247 . + . ID=gene-LDO09_RS00120;Name=LDO09_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00120;old_locus_tag=TthAA11_00230 NZ_AP024926.1 Protein Homology CDS 24958 26247 . + 0 ID=cds-WP_143584093.1;Parent=gene-LDO09_RS00120;Dbxref=Genbank:WP_143584093.1;Name=WP_143584093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048998.1;locus_tag=LDO09_RS00120;product=ABC transporter substrate-binding protein;protein_id=WP_143584093.1;transl_table=11 NZ_AP024926.1 RefSeq gene 26299 27174 . + . ID=gene-LDO09_RS00125;Name=LDO09_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00125;old_locus_tag=TthAA11_00240 NZ_AP024926.1 Protein Homology CDS 26299 27174 . + 0 ID=cds-WP_143584095.1;Parent=gene-LDO09_RS00125;Dbxref=Genbank:WP_143584095.1;Name=WP_143584095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008634019.1;locus_tag=LDO09_RS00125;product=sugar ABC transporter permease;protein_id=WP_143584095.1;transl_table=11 NZ_AP024926.1 RefSeq gene 27171 28013 . + . ID=gene-LDO09_RS00130;Name=LDO09_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00130;old_locus_tag=TthAA11_00250 NZ_AP024926.1 Protein Homology CDS 27171 28013 . + 0 ID=cds-WP_014628824.1;Parent=gene-LDO09_RS00130;Dbxref=Genbank:WP_014628824.1;Name=WP_014628824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628824.1;locus_tag=LDO09_RS00130;product=carbohydrate ABC transporter permease;protein_id=WP_014628824.1;transl_table=11 NZ_AP024926.1 RefSeq gene 28032 29606 . - . ID=gene-LDO09_RS00135;Name=LDO09_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00135;old_locus_tag=TthAA11_00260 NZ_AP024926.1 Protein Homology CDS 28032 29606 . - 0 ID=cds-WP_143584097.1;Parent=gene-LDO09_RS00135;Dbxref=Genbank:WP_143584097.1;Name=WP_143584097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008634022.1;locus_tag=LDO09_RS00135;product=phosphoglucomutase;protein_id=WP_143584097.1;transl_table=11 NZ_AP024926.1 RefSeq gene 29662 31470 . - . ID=gene-LDO09_RS00140;Name=LDO09_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00140;old_locus_tag=TthAA11_00270 NZ_AP024926.1 Protein Homology CDS 29662 31470 . - 0 ID=cds-WP_143584099.1;Parent=gene-LDO09_RS00140;Dbxref=Genbank:WP_143584099.1;Name=WP_143584099.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174000.1;locus_tag=LDO09_RS00140;product=peptidylprolyl isomerase;protein_id=WP_143584099.1;transl_table=11 NZ_AP024926.1 RefSeq gene 31514 31590 . + . ID=gene-LDO09_RS00145;Name=LDO09_RS00145;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS00145;old_locus_tag=TthAA11_t00020 NZ_AP024926.1 tRNAscan-SE tRNA 31514 31590 . + . ID=rna-LDO09_RS00145;Parent=gene-LDO09_RS00145;anticodon=(pos:31548..31550);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00145;product=tRNA-Arg NZ_AP024926.1 tRNAscan-SE exon 31514 31590 . + . ID=exon-LDO09_RS00145-1;Parent=rna-LDO09_RS00145;anticodon=(pos:31548..31550);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00145;product=tRNA-Arg NZ_AP024926.1 RefSeq gene 31692 32828 . + . ID=gene-LDO09_RS00150;Name=LDO09_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00150;old_locus_tag=TthAA11_00280 NZ_AP024926.1 Protein Homology CDS 31692 32828 . + 0 ID=cds-WP_143584101.1;Parent=gene-LDO09_RS00150;Dbxref=Genbank:WP_143584101.1;Name=WP_143584101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628827.1;locus_tag=LDO09_RS00150;product=MFS transporter;protein_id=WP_143584101.1;transl_table=11 NZ_AP024926.1 RefSeq gene 32825 33631 . + . ID=gene-LDO09_RS00155;Name=LDO09_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00155;old_locus_tag=TthAA11_00290 NZ_AP024926.1 Protein Homology CDS 32825 33631 . + 0 ID=cds-WP_143584103.1;Parent=gene-LDO09_RS00155;Dbxref=Genbank:WP_143584103.1;Name=WP_143584103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008634030.1;locus_tag=LDO09_RS00155;product=universal stress protein;protein_id=WP_143584103.1;transl_table=11 NZ_AP024926.1 RefSeq gene 33675 34106 . + . ID=gene-LDO09_RS00160;Name=LDO09_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00160;old_locus_tag=TthAA11_00300 NZ_AP024926.1 Protein Homology CDS 33675 34106 . + 0 ID=cds-WP_011174003.1;Parent=gene-LDO09_RS00160;Dbxref=Genbank:WP_011174003.1;Name=WP_011174003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008634031.1;locus_tag=LDO09_RS00160;product=CBS domain-containing protein;protein_id=WP_011174003.1;transl_table=11 NZ_AP024926.1 RefSeq gene 34103 34450 . - . ID=gene-LDO09_RS00165;Name=LDO09_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00165;old_locus_tag=TthAA11_00310 NZ_AP024926.1 Protein Homology CDS 34103 34450 . - 0 ID=cds-WP_014628830.1;Parent=gene-LDO09_RS00165;Dbxref=Genbank:WP_014628830.1;Name=WP_014628830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509703.1;locus_tag=LDO09_RS00165;product=phage holin family protein;protein_id=WP_014628830.1;transl_table=11 NZ_AP024926.1 RefSeq gene 34463 35377 . - . ID=gene-LDO09_RS00170;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=LDO09_RS00170;old_locus_tag=TthAA11_00320 NZ_AP024926.1 Protein Homology CDS 34463 35377 . - 0 ID=cds-WP_060384014.1;Parent=gene-LDO09_RS00170;Dbxref=Genbank:WP_060384014.1;Name=WP_060384014.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628831.1;locus_tag=LDO09_RS00170;product=cysteine synthase A;protein_id=WP_060384014.1;transl_table=11 NZ_AP024926.1 RefSeq gene 35486 35935 . + . ID=gene-LDO09_RS00175;Name=LDO09_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00175;old_locus_tag=TthAA11_00330 NZ_AP024926.1 Protein Homology CDS 35486 35935 . + 0 ID=cds-WP_143584106.1;Parent=gene-LDO09_RS00175;Dbxref=Genbank:WP_143584106.1;Name=WP_143584106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008634034.1;locus_tag=LDO09_RS00175;product=peptidylprolyl isomerase;protein_id=WP_143584106.1;transl_table=11 NZ_AP024926.1 RefSeq gene 35993 36898 . + . ID=gene-LDO09_RS00180;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=LDO09_RS00180;old_locus_tag=TthAA11_00340 NZ_AP024926.1 Protein Homology CDS 35993 36898 . + 0 ID=cds-WP_014628832.1;Parent=gene-LDO09_RS00180;Dbxref=Genbank:WP_014628832.1;Name=WP_014628832.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628832.1;locus_tag=LDO09_RS00180;product=hydroxymethylbilane synthase;protein_id=WP_014628832.1;transl_table=11 NZ_AP024926.1 RefSeq gene 36941 37336 . + . ID=gene-LDO09_RS00185;Name=LDO09_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00185;old_locus_tag=TthAA11_00350 NZ_AP024926.1 Protein Homology CDS 36941 37336 . + 0 ID=cds-WP_011174007.1;Parent=gene-LDO09_RS00185;Dbxref=Genbank:WP_011174007.1;Name=WP_011174007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008634036.1;locus_tag=LDO09_RS00185;product=transcriptional repressor;protein_id=WP_011174007.1;transl_table=11 NZ_AP024926.1 RefSeq gene 37337 38581 . + . ID=gene-LDO09_RS00190;Name=LDO09_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00190;old_locus_tag=TthAA11_00360 NZ_AP024926.1 Protein Homology CDS 37337 38581 . + 0 ID=cds-WP_143584108.1;Parent=gene-LDO09_RS00190;Dbxref=Genbank:WP_143584108.1;Name=WP_143584108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227872.1;locus_tag=LDO09_RS00190;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_143584108.1;transl_table=11 NZ_AP024926.1 RefSeq gene 38591 39721 . - . ID=gene-LDO09_RS00195;Name=LDO09_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00195;old_locus_tag=TthAA11_00370 NZ_AP024926.1 Protein Homology CDS 38591 39721 . - 0 ID=cds-WP_143584110.1;Parent=gene-LDO09_RS00195;Dbxref=Genbank:WP_143584110.1;Name=WP_143584110.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174009.1;locus_tag=LDO09_RS00195;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_143584110.1;transl_table=11 NZ_AP024926.1 RefSeq gene 39714 40208 . - . ID=gene-LDO09_RS00200;Name=LDO09_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00200;old_locus_tag=TthAA11_00380 NZ_AP024926.1 Protein Homology CDS 39714 40208 . - 0 ID=cds-WP_008634041.1;Parent=gene-LDO09_RS00200;Dbxref=Genbank:WP_008634041.1;Name=WP_008634041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550579.1;locus_tag=LDO09_RS00200;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_008634041.1;transl_table=11 NZ_AP024926.1 RefSeq gene 40215 40373 . - . ID=gene-LDO09_RS00205;Name=LDO09_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00205;old_locus_tag=TthAA11_00390 NZ_AP024926.1 GeneMarkS-2+ CDS 40215 40373 . - 0 ID=cds-WP_172619143.1;Parent=gene-LDO09_RS00205;Dbxref=Genbank:WP_172619143.1;Name=WP_172619143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS00205;product=hypothetical protein;protein_id=WP_172619143.1;transl_table=11 NZ_AP024926.1 RefSeq gene 40413 41852 . + . ID=gene-LDO09_RS00210;Name=LDO09_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00210;old_locus_tag=TthAA11_00400 NZ_AP024926.1 Protein Homology CDS 40413 41852 . + 0 ID=cds-WP_143584112.1;Parent=gene-LDO09_RS00210;Dbxref=Genbank:WP_143584112.1;Name=WP_143584112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628836.1;locus_tag=LDO09_RS00210;product=tetratricopeptide repeat protein;protein_id=WP_143584112.1;transl_table=11 NZ_AP024926.1 RefSeq gene 41852 42619 . + . ID=gene-LDO09_RS00215;Name=LDO09_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00215;old_locus_tag=TthAA11_00410 NZ_AP024926.1 Protein Homology CDS 41852 42619 . + 0 ID=cds-WP_143584114.1;Parent=gene-LDO09_RS00215;Dbxref=Genbank:WP_143584114.1;Name=WP_143584114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227867.1;locus_tag=LDO09_RS00215;product=SAM-dependent chlorinase/fluorinase;protein_id=WP_143584114.1;transl_table=11 NZ_AP024926.1 RefSeq gene 42708 43112 . + . ID=gene-LDO09_RS00220;Name=LDO09_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00220;old_locus_tag=TthAA11_00420 NZ_AP024926.1 Protein Homology CDS 42708 43112 . + 0 ID=cds-WP_008634048.1;Parent=gene-LDO09_RS00220;Dbxref=Genbank:WP_008634048.1;Name=WP_008634048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516517.1;locus_tag=LDO09_RS00220;product=DUF4395 family protein;protein_id=WP_008634048.1;transl_table=11 NZ_AP024926.1 RefSeq gene 43099 43572 . - . ID=gene-LDO09_RS00225;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=LDO09_RS00225;old_locus_tag=TthAA11_00430 NZ_AP024926.1 Protein Homology CDS 43099 43572 . - 0 ID=cds-WP_008634050.1;Parent=gene-LDO09_RS00225;Dbxref=Genbank:WP_008634050.1;Name=WP_008634050.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046858.1;locus_tag=LDO09_RS00225;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_008634050.1;transl_table=11 NZ_AP024926.1 RefSeq gene 43593 43970 . + . ID=gene-LDO09_RS00230;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LDO09_RS00230;old_locus_tag=TthAA11_00440 NZ_AP024926.1 Protein Homology CDS 43593 43970 . + 0 ID=cds-WP_011227866.1;Parent=gene-LDO09_RS00230;Dbxref=Genbank:WP_011227866.1;Name=WP_011227866.1;Ontology_term=GO:1903424,GO:1903425,GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008634051.1;locus_tag=LDO09_RS00230;product=fluoride efflux transporter CrcB;protein_id=WP_011227866.1;transl_table=11 NZ_AP024926.1 RefSeq gene 43975 44307 . + . ID=gene-LDO09_RS00235;Name=LDO09_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00235;old_locus_tag=TthAA11_00450 NZ_AP024926.1 Protein Homology CDS 43975 44307 . + 0 ID=cds-WP_143584116.1;Parent=gene-LDO09_RS00235;Dbxref=Genbank:WP_143584116.1;Name=WP_143584116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008634053.1;locus_tag=LDO09_RS00235;product=DUF190 domain-containing protein;protein_id=WP_143584116.1;transl_table=11 NZ_AP024926.1 RefSeq gene 44338 45000 . + . ID=gene-LDO09_RS00240;Name=LDO09_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00240;old_locus_tag=TthAA11_00460 NZ_AP024926.1 Protein Homology CDS 44338 45000 . + 0 ID=cds-WP_143584118.1;Parent=gene-LDO09_RS00240;Dbxref=Genbank:WP_143584118.1;Name=WP_143584118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509707.1;locus_tag=LDO09_RS00240;product=sulfite oxidase-like oxidoreductase;protein_id=WP_143584118.1;transl_table=11 NZ_AP024926.1 RefSeq gene 45023 45289 . + . ID=gene-LDO09_RS00245;Name=LDO09_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00245;old_locus_tag=TthAA11_00470 NZ_AP024926.1 Protein Homology CDS 45023 45289 . + 0 ID=cds-WP_011174017.1;Parent=gene-LDO09_RS00245;Dbxref=Genbank:WP_011174017.1;Name=WP_011174017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174017.1;locus_tag=LDO09_RS00245;product=hypothetical protein;protein_id=WP_011174017.1;transl_table=11 NZ_AP024926.1 RefSeq gene 45265 46068 . - . ID=gene-LDO09_RS00250;Name=LDO09_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00250;old_locus_tag=TthAA11_00480 NZ_AP024926.1 Protein Homology CDS 45265 46068 . - 0 ID=cds-WP_124105209.1;Parent=gene-LDO09_RS00250;Dbxref=Genbank:WP_124105209.1;Name=WP_124105209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227864.1;locus_tag=LDO09_RS00250;product=histidinol-phosphatase;protein_id=WP_124105209.1;transl_table=11 NZ_AP024926.1 RefSeq gene 46058 46654 . - . ID=gene-LDO09_RS00255;Name=LDO09_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00255;old_locus_tag=TthAA11_00490 NZ_AP024926.1 Protein Homology CDS 46058 46654 . - 0 ID=cds-WP_008634059.1;Parent=gene-LDO09_RS00255;Dbxref=Genbank:WP_008634059.1;Name=WP_008634059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628842.1;locus_tag=LDO09_RS00255;product=hypothetical protein;protein_id=WP_008634059.1;transl_table=11 NZ_AP024926.1 RefSeq gene 46630 47187 . - . ID=gene-LDO09_RS00260;Name=LDO09_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00260;old_locus_tag=TthAA11_00500 NZ_AP024926.1 Protein Homology CDS 46630 47187 . - 0 ID=cds-WP_223968755.1;Parent=gene-LDO09_RS00260;Dbxref=Genbank:WP_223968755.1;Name=WP_223968755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628843.1;locus_tag=LDO09_RS00260;product=DNA-3-methyladenine glycosylase 2 family protein;protein_id=WP_223968755.1;transl_table=11 NZ_AP024926.1 RefSeq gene 47180 47770 . - . ID=gene-LDO09_RS00265;Name=LDO09_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00265;old_locus_tag=TthAA11_00510 NZ_AP024926.1 Protein Homology CDS 47180 47770 . - 0 ID=cds-WP_223968757.1;Parent=gene-LDO09_RS00265;Dbxref=Genbank:WP_223968757.1;Name=WP_223968757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174021.1;locus_tag=LDO09_RS00265;product=nicotinamidase;protein_id=WP_223968757.1;transl_table=11 NZ_AP024926.1 RefSeq gene 47830 48720 . + . ID=gene-LDO09_RS00270;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LDO09_RS00270;old_locus_tag=TthAA11_00520 NZ_AP024926.1 Protein Homology CDS 47830 48720 . + 0 ID=cds-WP_223968759.1;Parent=gene-LDO09_RS00270;Dbxref=Genbank:WP_223968759.1;Name=WP_223968759.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174022.1;locus_tag=LDO09_RS00270;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_223968759.1;transl_table=11 NZ_AP024926.1 RefSeq gene 48835 49806 . + . ID=gene-LDO09_RS00275;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LDO09_RS00275;old_locus_tag=TthAA11_00530 NZ_AP024926.1 Protein Homology CDS 48835 49806 . + 0 ID=cds-WP_172619147.1;Parent=gene-LDO09_RS00275;Dbxref=Genbank:WP_172619147.1;Name=WP_172619147.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718295.1;locus_tag=LDO09_RS00275;product=AFG1/ZapE family ATPase;protein_id=WP_172619147.1;transl_table=11 NZ_AP024926.1 RefSeq gene 49816 50061 . + . ID=gene-LDO09_RS00280;Name=LDO09_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00280;old_locus_tag=TthAA11_00540 NZ_AP024926.1 Protein Homology CDS 49816 50061 . + 0 ID=cds-WP_143584129.1;Parent=gene-LDO09_RS00280;Dbxref=Genbank:WP_143584129.1;Name=WP_143584129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516573.1;locus_tag=LDO09_RS00280;product=hypothetical protein;protein_id=WP_143584129.1;transl_table=11 NZ_AP024926.1 RefSeq gene 50058 51203 . + . ID=gene-LDO09_RS00285;Name=LDO09_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00285;old_locus_tag=TthAA11_00550 NZ_AP024926.1 Protein Homology CDS 50058 51203 . + 0 ID=cds-WP_143584131.1;Parent=gene-LDO09_RS00285;Dbxref=Genbank:WP_143584131.1;Name=WP_143584131.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,cellular metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718293.1;locus_tag=LDO09_RS00285;product=phosphopentomutase;protein_id=WP_143584131.1;transl_table=11 NZ_AP024926.1 RefSeq gene 51207 51932 . + . ID=gene-LDO09_RS00290;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=LDO09_RS00290;old_locus_tag=TthAA11_00560 NZ_AP024926.1 Protein Homology CDS 51207 51932 . + 0 ID=cds-WP_011174026.1;Parent=gene-LDO09_RS00290;Dbxref=Genbank:WP_011174026.1;Name=WP_011174026.1;Ontology_term=GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008634072.1;locus_tag=LDO09_RS00290;product=diadenylate cyclase CdaA;protein_id=WP_011174026.1;transl_table=11 NZ_AP024926.1 RefSeq gene 51925 52734 . + . ID=gene-LDO09_RS00295;Name=LDO09_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00295;old_locus_tag=TthAA11_00570 NZ_AP024926.1 Protein Homology CDS 51925 52734 . + 0 ID=cds-WP_223968761.1;Parent=gene-LDO09_RS00295;Dbxref=Genbank:WP_223968761.1;Name=WP_223968761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174027.1;locus_tag=LDO09_RS00295;product=hypothetical protein;protein_id=WP_223968761.1;transl_table=11 NZ_AP024926.1 RefSeq gene 52740 53318 . + . ID=gene-LDO09_RS00300;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LDO09_RS00300;old_locus_tag=TthAA11_00580 NZ_AP024926.1 Protein Homology CDS 52740 53318 . + 0 ID=cds-WP_165739403.1;Parent=gene-LDO09_RS00300;Dbxref=Genbank:WP_165739403.1;Name=WP_165739403.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174028.1;locus_tag=LDO09_RS00300;product=peptide deformylase;protein_id=WP_165739403.1;transl_table=11 NZ_AP024926.1 RefSeq gene 53315 54232 . + . ID=gene-LDO09_RS00305;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LDO09_RS00305;old_locus_tag=TthAA11_00590 NZ_AP024926.1 Protein Homology CDS 53315 54232 . + 0 ID=cds-WP_143584137.1;Parent=gene-LDO09_RS00305;Dbxref=Genbank:WP_143584137.1;Name=WP_143584137.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628850.1;locus_tag=LDO09_RS00305;product=methionyl-tRNA formyltransferase;protein_id=WP_143584137.1;transl_table=11 NZ_AP024926.1 RefSeq gene 54241 55062 . + . ID=gene-LDO09_RS00310;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LDO09_RS00310;old_locus_tag=TthAA11_00600 NZ_AP024926.1 Protein Homology CDS 54241 55062 . + 0 ID=cds-WP_011174030.1;Parent=gene-LDO09_RS00310;Dbxref=Genbank:WP_011174030.1;Name=WP_011174030.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628851.1;locus_tag=LDO09_RS00310;product=RNase adapter RapZ;protein_id=WP_011174030.1;transl_table=11 NZ_AP024926.1 RefSeq gene 55043 56269 . + . ID=gene-LDO09_RS00315;Name=LDO09_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00315;old_locus_tag=TthAA11_00610 NZ_AP024926.1 Protein Homology CDS 55043 56269 . + 0 ID=cds-WP_143584139.1;Parent=gene-LDO09_RS00315;Dbxref=Genbank:WP_143584139.1;Name=WP_143584139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174031.1;locus_tag=LDO09_RS00315;product=YvcK family protein;protein_id=WP_143584139.1;transl_table=11 NZ_AP024926.1 RefSeq gene 56278 56982 . + . ID=gene-LDO09_RS00320;Name=LDO09_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00320;old_locus_tag=TthAA11_00620 NZ_AP024926.1 Protein Homology CDS 56278 56982 . + 0 ID=cds-WP_143584141.1;Parent=gene-LDO09_RS00320;Dbxref=Genbank:WP_143584141.1;Name=WP_143584141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227856.1;locus_tag=LDO09_RS00320;product=hypothetical protein;protein_id=WP_143584141.1;transl_table=11 NZ_AP024926.1 RefSeq gene 56929 57372 . - . ID=gene-LDO09_RS00325;Name=LDO09_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00325;old_locus_tag=TthAA11_00630 NZ_AP024926.1 Protein Homology CDS 56929 57372 . - 0 ID=cds-WP_143584143.1;Parent=gene-LDO09_RS00325;Dbxref=Genbank:WP_143584143.1;Name=WP_143584143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509714.1;locus_tag=LDO09_RS00325;product=hypothetical protein;protein_id=WP_143584143.1;transl_table=11 NZ_AP024926.1 RefSeq gene 57441 58406 . - . ID=gene-LDO09_RS00330;Name=LDO09_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00330;old_locus_tag=TthAA11_00640 NZ_AP024926.1 Protein Homology CDS 57441 58406 . - 0 ID=cds-WP_223968763.1;Parent=gene-LDO09_RS00330;Dbxref=Genbank:WP_223968763.1;Name=WP_223968763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174034.1;locus_tag=LDO09_RS00330;product=hypothetical protein;protein_id=WP_223968763.1;transl_table=11 NZ_AP024926.1 RefSeq gene 58480 59583 . + . ID=gene-LDO09_RS00335;Name=LDO09_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00335;old_locus_tag=TthAA11_00650 NZ_AP024926.1 Protein Homology CDS 58480 59583 . + 0 ID=cds-WP_223966707.1;Parent=gene-LDO09_RS00335;Dbxref=Genbank:WP_223966707.1;Name=WP_223966707.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008634087.1;locus_tag=LDO09_RS00335;product=MFS transporter;protein_id=WP_223966707.1;transl_table=11 NZ_AP024926.1 RefSeq gene 59929 60123 . - . ID=gene-LDO09_RS00340;Name=LDO09_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00340;old_locus_tag=TthAA11_00660 NZ_AP024926.1 Protein Homology CDS 59929 60123 . - 0 ID=cds-WP_024119096.1;Parent=gene-LDO09_RS00340;Dbxref=Genbank:WP_024119096.1;Name=WP_024119096.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019540.2;locus_tag=LDO09_RS00340;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_024119096.1;transl_table=11 NZ_AP024926.1 RefSeq gene 60123 60344 . - . ID=gene-LDO09_RS00345;Name=LDO09_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00345;old_locus_tag=TthAA11_00670 NZ_AP024926.1 Protein Homology CDS 60123 60344 . - 0 ID=cds-WP_014509716.1;Parent=gene-LDO09_RS00345;Dbxref=Genbank:WP_014509716.1;Name=WP_014509716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046672.1;locus_tag=LDO09_RS00345;product=DUF1902 domain-containing protein;protein_id=WP_014509716.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 60387 60614 . + . ID=gene-LDO09_RS00350;Name=LDO09_RS00350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS00350;old_locus_tag=TthAA11_00680;partial=true;pseudo=true;start_range=.,60387 NZ_AP024926.1 Protein Homology CDS 60387 60614 . + 0 ID=cds-LDO09_RS00350;Parent=gene-LDO09_RS00350;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716383.1;locus_tag=LDO09_RS00350;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,60387;transl_table=11 NZ_AP024926.1 RefSeq gene 60656 61497 . + . ID=gene-LDO09_RS00355;Name=LDO09_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00355 NZ_AP024926.1 Protein Homology CDS 60656 61010 . + 0 ID=cds-WP_223968627.1;Parent=gene-LDO09_RS00355;Dbxref=Genbank:WP_223968627.1;Name=WP_223968627.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336521.1;locus_tag=LDO09_RS00355;product=IS5 family transposase;protein_id=WP_223968627.1;transl_table=11 NZ_AP024926.1 Protein Homology CDS 61010 61497 . + 2 ID=cds-WP_223968627.1;Parent=gene-LDO09_RS00355;Dbxref=Genbank:WP_223968627.1;Name=WP_223968627.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336521.1;locus_tag=LDO09_RS00355;product=IS5 family transposase;protein_id=WP_223968627.1;transl_table=11 NZ_AP024926.1 RefSeq gene 61600 61676 . - . ID=gene-LDO09_RS00360;Name=LDO09_RS00360;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS00360;old_locus_tag=TthAA11_t00030 NZ_AP024926.1 tRNAscan-SE tRNA 61600 61676 . - . ID=rna-LDO09_RS00360;Parent=gene-LDO09_RS00360;anticodon=(pos:complement(61640..61642));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00360;product=tRNA-Val NZ_AP024926.1 tRNAscan-SE exon 61600 61676 . - . ID=exon-LDO09_RS00360-1;Parent=rna-LDO09_RS00360;anticodon=(pos:complement(61640..61642));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00360;product=tRNA-Val NZ_AP024926.1 RefSeq gene 61678 61752 . - . ID=gene-LDO09_RS00365;Name=LDO09_RS00365;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS00365;old_locus_tag=TthAA11_t00040 NZ_AP024926.1 tRNAscan-SE tRNA 61678 61752 . - . ID=rna-LDO09_RS00365;Parent=gene-LDO09_RS00365;anticodon=(pos:complement(61717..61719));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00365;product=tRNA-Glu NZ_AP024926.1 tRNAscan-SE exon 61678 61752 . - . ID=exon-LDO09_RS00365-1;Parent=rna-LDO09_RS00365;anticodon=(pos:complement(61717..61719));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00365;product=tRNA-Glu NZ_AP024926.1 RefSeq gene 61759 61834 . - . ID=gene-LDO09_RS00370;Name=LDO09_RS00370;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS00370;old_locus_tag=TthAA11_t00050 NZ_AP024926.1 tRNAscan-SE tRNA 61759 61834 . - . ID=rna-LDO09_RS00370;Parent=gene-LDO09_RS00370;anticodon=(pos:complement(61799..61801));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00370;product=tRNA-Lys NZ_AP024926.1 tRNAscan-SE exon 61759 61834 . - . ID=exon-LDO09_RS00370-1;Parent=rna-LDO09_RS00370;anticodon=(pos:complement(61799..61801));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00370;product=tRNA-Lys NZ_AP024926.1 RefSeq gene 61881 62600 . - . ID=gene-LDO09_RS00375;Name=LDO09_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00375;old_locus_tag=TthAA11_00710 NZ_AP024926.1 Protein Homology CDS 61881 62600 . - 0 ID=cds-WP_143584149.1;Parent=gene-LDO09_RS00375;Dbxref=Genbank:WP_143584149.1;Name=WP_143584149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174036.1;locus_tag=LDO09_RS00375;product=hypothetical protein;protein_id=WP_143584149.1;transl_table=11 NZ_AP024926.1 RefSeq gene 62645 65020 . - . ID=gene-LDO09_RS00380;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=LDO09_RS00380;old_locus_tag=TthAA11_00720 NZ_AP024926.1 Protein Homology CDS 62645 65020 . - 0 ID=cds-WP_143584152.1;Parent=gene-LDO09_RS00380;Dbxref=Genbank:WP_143584152.1;Name=WP_143584152.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550597.1;locus_tag=LDO09_RS00380;product=cytochrome c oxidase subunit I;protein_id=WP_143584152.1;transl_table=11 NZ_AP024926.1 RefSeq gene 65033 66046 . - . ID=gene-LDO09_RS00385;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=LDO09_RS00385;old_locus_tag=TthAA11_00730 NZ_AP024926.1 Protein Homology CDS 65033 66046 . - 0 ID=cds-WP_143584154.1;Parent=gene-LDO09_RS00385;Dbxref=Genbank:WP_143584154.1;Name=WP_143584154.1;Ontology_term=GO:0004129;gbkey=CDS;gene=coxB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628859.1;locus_tag=LDO09_RS00385;product=cytochrome c oxidase subunit II;protein_id=WP_143584154.1;transl_table=11 NZ_AP024926.1 RefSeq gene 66061 67887 . - . ID=gene-LDO09_RS00390;Name=LDO09_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00390;old_locus_tag=TthAA11_00740 NZ_AP024926.1 Protein Homology CDS 66061 67887 . - 0 ID=cds-WP_223968765.1;Parent=gene-LDO09_RS00390;Dbxref=Genbank:WP_223968765.1;Name=WP_223968765.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174039.1;locus_tag=LDO09_RS00390;product=heme o synthase;protein_id=WP_223968765.1;transl_table=11 NZ_AP024926.1 RefSeq gene 68038 69135 . + . ID=gene-LDO09_RS00395;Name=LDO09_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00395;old_locus_tag=TthAA11_00750 NZ_AP024926.1 Protein Homology CDS 68038 69135 . + 0 ID=cds-WP_014509721.1;Parent=gene-LDO09_RS00395;Dbxref=Genbank:WP_014509721.1;Name=WP_014509721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628861.1;locus_tag=LDO09_RS00395;product=AI-2E family transporter;protein_id=WP_014509721.1;transl_table=11 NZ_AP024926.1 RefSeq gene 69198 70433 . - . ID=gene-LDO09_RS00400;Name=LDO09_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00400;old_locus_tag=TthAA11_00760 NZ_AP024926.1 Protein Homology CDS 69198 70433 . - 0 ID=cds-WP_223968767.1;Parent=gene-LDO09_RS00400;Dbxref=Genbank:WP_223968767.1;Name=WP_223968767.1;Ontology_term=GO:0015851,GO:0015205,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174041.1;locus_tag=LDO09_RS00400;product=NCS2 family nucleobase:cation symporter;protein_id=WP_223968767.1;transl_table=11 NZ_AP024926.1 RefSeq gene 70519 71676 . - . ID=gene-LDO09_RS00405;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LDO09_RS00405;old_locus_tag=TthAA11_00770 NZ_AP024926.1 Protein Homology CDS 70519 71676 . - 0 ID=cds-WP_223968769.1;Parent=gene-LDO09_RS00405;Dbxref=Genbank:WP_223968769.1;Name=WP_223968769.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628863.1;locus_tag=LDO09_RS00405;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_223968769.1;transl_table=11 NZ_AP024926.1 RefSeq gene 71676 72896 . - . ID=gene-LDO09_RS00410;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=LDO09_RS00410;old_locus_tag=TthAA11_00780 NZ_AP024926.1 Protein Homology CDS 71676 72896 . - 0 ID=cds-WP_223968771.1;Parent=gene-LDO09_RS00410;Dbxref=Genbank:WP_223968771.1;Name=WP_223968771.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628864.1;locus_tag=LDO09_RS00410;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_223968771.1;transl_table=11 NZ_AP024926.1 RefSeq gene 72932 73717 . - . ID=gene-LDO09_RS00415;Name=LDO09_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00415;old_locus_tag=TthAA11_00790 NZ_AP024926.1 Protein Homology CDS 72932 73717 . - 0 ID=cds-WP_143584172.1;Parent=gene-LDO09_RS00415;Dbxref=Genbank:WP_143584172.1;Name=WP_143584172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509725.1;locus_tag=LDO09_RS00415;product=enoyl-ACP reductase;protein_id=WP_143584172.1;transl_table=11 NZ_AP024926.1 RefSeq gene 73869 74378 . + . ID=gene-LDO09_RS00420;Name=LDO09_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00420;old_locus_tag=TthAA11_00800 NZ_AP024926.1 Protein Homology CDS 73869 74378 . + 0 ID=cds-WP_165739216.1;Parent=gene-LDO09_RS00420;Dbxref=Genbank:WP_165739216.1;Name=WP_165739216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174045.1;locus_tag=LDO09_RS00420;product=DinB family protein;protein_id=WP_165739216.1;transl_table=11 NZ_AP024926.1 RefSeq gene 74357 74611 . - . ID=gene-LDO09_RS00425;Name=LDO09_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00425;old_locus_tag=TthAA11_00810 NZ_AP024926.1 Protein Homology CDS 74357 74611 . - 0 ID=cds-WP_223968774.1;Parent=gene-LDO09_RS00425;Dbxref=Genbank:WP_223968774.1;Name=WP_223968774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632584.1;locus_tag=LDO09_RS00425;product=glutaredoxin family protein;protein_id=WP_223968774.1;transl_table=11 NZ_AP024926.1 RefSeq gene 74644 75069 . - . ID=gene-LDO09_RS00430;Name=LDO09_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00430;old_locus_tag=TthAA11_00820 NZ_AP024926.1 Protein Homology CDS 74644 75069 . - 0 ID=cds-WP_223968776.1;Parent=gene-LDO09_RS00430;Dbxref=Genbank:WP_223968776.1;Name=WP_223968776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509727.1;locus_tag=LDO09_RS00430;product=hypothetical protein;protein_id=WP_223968776.1;transl_table=11 NZ_AP024926.1 RefSeq gene 75121 76284 . - . ID=gene-LDO09_RS00435;Name=LDO09_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00435;old_locus_tag=TthAA11_00830 NZ_AP024926.1 Protein Homology CDS 75121 76284 . - 0 ID=cds-WP_143584178.1;Parent=gene-LDO09_RS00435;Dbxref=Genbank:WP_143584178.1;Name=WP_143584178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628868.1;locus_tag=LDO09_RS00435;product=hypothetical protein;protein_id=WP_143584178.1;transl_table=11 NZ_AP024926.1 RefSeq gene 76307 79411 . - . ID=gene-LDO09_RS00440;Name=LDO09_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00440;old_locus_tag=TthAA11_00840 NZ_AP024926.1 Protein Homology CDS 76307 79411 . - 0 ID=cds-WP_223968778.1;Parent=gene-LDO09_RS00440;Dbxref=Genbank:WP_223968778.1;Name=WP_223968778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628869.1;locus_tag=LDO09_RS00440;product=hypothetical protein;protein_id=WP_223968778.1;transl_table=11 NZ_AP024926.1 RefSeq gene 79413 79901 . - . ID=gene-LDO09_RS00445;Name=LDO09_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00445;old_locus_tag=TthAA11_00850 NZ_AP024926.1 Protein Homology CDS 79413 79901 . - 0 ID=cds-WP_014509729.1;Parent=gene-LDO09_RS00445;Dbxref=Genbank:WP_014509729.1;Name=WP_014509729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509729.1;locus_tag=LDO09_RS00445;product=hypothetical protein;protein_id=WP_014509729.1;transl_table=11 NZ_AP024926.1 RefSeq gene 79898 80749 . - . ID=gene-LDO09_RS00450;Name=LDO09_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00450;old_locus_tag=TthAA11_00860 NZ_AP024926.1 Protein Homology CDS 79898 80749 . - 0 ID=cds-WP_014628870.1;Parent=gene-LDO09_RS00450;Dbxref=Genbank:WP_014628870.1;Name=WP_014628870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628870.1;locus_tag=LDO09_RS00450;product=hypothetical protein;protein_id=WP_014628870.1;transl_table=11 NZ_AP024926.1 RefSeq gene 80804 81640 . - . ID=gene-LDO09_RS00455;Name=LDO09_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00455;old_locus_tag=TthAA11_00870 NZ_AP024926.1 Protein Homology CDS 80804 81640 . - 0 ID=cds-WP_143584184.1;Parent=gene-LDO09_RS00455;Dbxref=Genbank:WP_143584184.1;Name=WP_143584184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628871.1;locus_tag=LDO09_RS00455;product=hypothetical protein;protein_id=WP_143584184.1;transl_table=11 NZ_AP024926.1 RefSeq gene 81781 83358 . + . ID=gene-LDO09_RS12045;Name=LDO09_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12045;old_locus_tag=TthAA11_00880 NZ_AP024926.1 Protein Homology CDS 81781 83358 . + 0 ID=cds-WP_143584187.1;Parent=gene-LDO09_RS12045;Dbxref=Genbank:WP_143584187.1;Name=WP_143584187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628872.1;locus_tag=LDO09_RS12045;product=hypothetical protein;protein_id=WP_143584187.1;transl_table=11 NZ_AP024926.1 RefSeq gene 83278 83490 . - . ID=gene-LDO09_RS00465;Name=LDO09_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00465;old_locus_tag=TthAA11_00890 NZ_AP024926.1 Protein Homology CDS 83278 83490 . - 0 ID=cds-WP_008632579.1;Parent=gene-LDO09_RS00465;Dbxref=Genbank:WP_008632579.1;Name=WP_008632579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632579.1;locus_tag=LDO09_RS00465;product=DUF2905 domain-containing protein;protein_id=WP_008632579.1;transl_table=11 NZ_AP024926.1 RefSeq gene 83477 84385 . - . ID=gene-LDO09_RS00470;Name=LDO09_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00470;old_locus_tag=TthAA11_00900 NZ_AP024926.1 Protein Homology CDS 83477 84385 . - 0 ID=cds-WP_143584190.1;Parent=gene-LDO09_RS00470;Dbxref=Genbank:WP_143584190.1;Name=WP_143584190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174053.1;locus_tag=LDO09_RS00470;product=glucokinase;protein_id=WP_143584190.1;transl_table=11 NZ_AP024926.1 RefSeq gene 84382 84618 . - . ID=gene-LDO09_RS00475;Name=LDO09_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00475;old_locus_tag=TthAA11_00910 NZ_AP024926.1 Protein Homology CDS 84382 84618 . - 0 ID=cds-WP_143584193.1;Parent=gene-LDO09_RS00475;Dbxref=Genbank:WP_143584193.1;Name=WP_143584193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174054.1;locus_tag=LDO09_RS00475;product=hypothetical protein;protein_id=WP_143584193.1;transl_table=11 NZ_AP024926.1 RefSeq gene 84603 85673 . - . ID=gene-LDO09_RS00480;Name=LDO09_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00480;old_locus_tag=TthAA11_00920 NZ_AP024926.1 Protein Homology CDS 84603 85673 . - 0 ID=cds-WP_143584196.1;Parent=gene-LDO09_RS00480;Dbxref=Genbank:WP_143584196.1;Name=WP_143584196.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174055.1;locus_tag=LDO09_RS00480;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_143584196.1;transl_table=11 NZ_AP024926.1 RefSeq gene 85678 86394 . - . ID=gene-LDO09_RS00485;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LDO09_RS00485;old_locus_tag=TthAA11_00930 NZ_AP024926.1 Protein Homology CDS 85678 86394 . - 0 ID=cds-WP_011174056.1;Parent=gene-LDO09_RS00485;Dbxref=Genbank:WP_011174056.1;Name=WP_011174056.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628875.1;locus_tag=LDO09_RS00485;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_011174056.1;transl_table=11 NZ_AP024926.1 RefSeq gene 86447 86881 . + . ID=gene-LDO09_RS00490;Name=LDO09_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00490;old_locus_tag=TthAA11_00940 NZ_AP024926.1 Protein Homology CDS 86447 86881 . + 0 ID=cds-WP_008632570.1;Parent=gene-LDO09_RS00490;Dbxref=Genbank:WP_008632570.1;Name=WP_008632570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111202.1;locus_tag=LDO09_RS00490;product=universal stress protein;protein_id=WP_008632570.1;transl_table=11 NZ_AP024926.1 RefSeq gene 86882 87397 . + . ID=gene-LDO09_RS00495;Name=LDO09_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00495;old_locus_tag=TthAA11_00950 NZ_AP024926.1 Protein Homology CDS 86882 87397 . + 0 ID=cds-WP_011174057.1;Parent=gene-LDO09_RS00495;Dbxref=Genbank:WP_011174057.1;Name=WP_011174057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174057.1;locus_tag=LDO09_RS00495;product=LOG family protein;protein_id=WP_011174057.1;transl_table=11 NZ_AP024926.1 RefSeq gene 87394 87762 . + . ID=gene-LDO09_RS00500;Name=LDO09_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00500;old_locus_tag=TthAA11_00960 NZ_AP024926.1 Protein Homology CDS 87394 87762 . + 0 ID=cds-WP_223965829.1;Parent=gene-LDO09_RS00500;Dbxref=Genbank:WP_223965829.1;Name=WP_223965829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628876.1;locus_tag=LDO09_RS00500;product=hypothetical protein;protein_id=WP_223965829.1;transl_table=11 NZ_AP024926.1 RefSeq gene 87759 88508 . + . ID=gene-LDO09_RS00505;Name=LDO09_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00505;old_locus_tag=TthAA11_00970 NZ_AP024926.1 Protein Homology CDS 87759 88508 . + 0 ID=cds-WP_143584202.1;Parent=gene-LDO09_RS00505;Dbxref=Genbank:WP_143584202.1;Name=WP_143584202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628877.1;locus_tag=LDO09_RS00505;product=HAD family hydrolase;protein_id=WP_143584202.1;transl_table=11 NZ_AP024926.1 RefSeq gene 88491 89066 . - . ID=gene-LDO09_RS00510;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LDO09_RS00510;old_locus_tag=TthAA11_00980 NZ_AP024926.1 Protein Homology CDS 88491 89066 . - 0 ID=cds-WP_143584205.1;Parent=gene-LDO09_RS00510;Dbxref=Genbank:WP_143584205.1;Name=WP_143584205.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174059.1;locus_tag=LDO09_RS00510;product=Holliday junction branch migration protein RuvA;protein_id=WP_143584205.1;transl_table=11 NZ_AP024926.1 RefSeq gene 89063 89827 . - . ID=gene-LDO09_RS00515;Name=LDO09_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00515;old_locus_tag=TthAA11_00990 NZ_AP024926.1 Protein Homology CDS 89063 89827 . - 0 ID=cds-WP_011174060.1;Parent=gene-LDO09_RS00515;Dbxref=Genbank:WP_011174060.1;Name=WP_011174060.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111055.1;locus_tag=LDO09_RS00515;product=enoyl-CoA hydratase-related protein;protein_id=WP_011174060.1;transl_table=11 NZ_AP024926.1 RefSeq gene 89905 92595 . + . ID=gene-LDO09_RS00520;Name=LDO09_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00520;old_locus_tag=TthAA11_01000 NZ_AP024926.1 Protein Homology CDS 89905 92595 . + 0 ID=cds-WP_223965831.1;Parent=gene-LDO09_RS00520;Dbxref=Genbank:WP_223965831.1;Name=WP_223965831.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227836.1;locus_tag=LDO09_RS00520;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_223965831.1;transl_table=11 NZ_AP024926.1 RefSeq gene 92606 93826 . + . ID=gene-LDO09_RS00525;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=LDO09_RS00525;old_locus_tag=TthAA11_01010 NZ_AP024926.1 Protein Homology CDS 92606 93826 . + 0 ID=cds-WP_223968781.1;Parent=gene-LDO09_RS00525;Dbxref=Genbank:WP_223968781.1;Name=WP_223968781.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227835.1;locus_tag=LDO09_RS00525;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_223968781.1;transl_table=11 NZ_AP024926.1 RefSeq gene 93828 95195 . + . ID=gene-LDO09_RS00530;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LDO09_RS00530;old_locus_tag=TthAA11_01020 NZ_AP024926.1 Protein Homology CDS 93828 95195 . + 0 ID=cds-WP_223968783.1;Parent=gene-LDO09_RS00530;Dbxref=Genbank:WP_223968783.1;Name=WP_223968783.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328414.1;locus_tag=LDO09_RS00530;product=dihydrolipoyl dehydrogenase;protein_id=WP_223968783.1;transl_table=11 NZ_AP024926.1 RefSeq gene 95203 95727 . - . ID=gene-LDO09_RS12050;Name=LDO09_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12050;old_locus_tag=TthAA11_01030 NZ_AP024926.1 Protein Homology CDS 95203 95727 . - 0 ID=cds-WP_014509880.1;Parent=gene-LDO09_RS12050;Dbxref=Genbank:WP_014509880.1;Name=WP_014509880.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=LDO09_RS12050;product=IS630 family transposase;protein_id=WP_014509880.1;transl_table=11 NZ_AP024926.1 RefSeq gene 95724 96245 . - . ID=gene-LDO09_RS12055;Name=LDO09_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12055;old_locus_tag=TthAA11_01040 NZ_AP024926.1 Protein Homology CDS 95724 96245 . - 0 ID=cds-WP_244347352.1;Parent=gene-LDO09_RS12055;Dbxref=Genbank:WP_244347352.1;Name=WP_244347352.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=LDO09_RS12055;product=IS630 family transposase;protein_id=WP_244347352.1;transl_table=11 NZ_AP024926.1 RefSeq gene 96322 98391 . - . ID=gene-LDO09_RS00540;Name=LDO09_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00540;old_locus_tag=TthAA11_01050 NZ_AP024926.1 Protein Homology CDS 96322 98391 . - 0 ID=cds-WP_223968785.1;Parent=gene-LDO09_RS00540;Dbxref=Genbank:WP_223968785.1;Name=WP_223968785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111051.1;locus_tag=LDO09_RS00540;product=S8 family serine peptidase;protein_id=WP_223968785.1;transl_table=11 NZ_AP024926.1 RefSeq gene 98398 100398 . - . ID=gene-LDO09_RS00545;Name=LDO09_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00545;old_locus_tag=TthAA11_01060 NZ_AP024926.1 Protein Homology CDS 98398 100398 . - 0 ID=cds-WP_223968787.1;Parent=gene-LDO09_RS00545;Dbxref=Genbank:WP_223968787.1;Name=WP_223968787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227832.1;locus_tag=LDO09_RS00545;product=carboxypeptidase regulatory-like domain-containing protein;protein_id=WP_223968787.1;transl_table=11 NZ_AP024926.1 RefSeq gene 100599 101801 . + . ID=gene-LDO09_RS00550;Name=LDO09_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00550;old_locus_tag=TthAA11_01070 NZ_AP024926.1 Protein Homology CDS 100599 101801 . + 0 ID=cds-WP_223968789.1;Parent=gene-LDO09_RS00550;Dbxref=Genbank:WP_223968789.1;Name=WP_223968789.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003047107.1;locus_tag=LDO09_RS00550;product=argininosuccinate synthase;protein_id=WP_223968789.1;transl_table=11 NZ_AP024926.1 RefSeq gene 101791 103179 . + . ID=gene-LDO09_RS00555;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=LDO09_RS00555;old_locus_tag=TthAA11_01080 NZ_AP024926.1 Protein Homology CDS 101791 103179 . + 0 ID=cds-WP_223968791.1;Parent=gene-LDO09_RS00555;Dbxref=Genbank:WP_223968791.1;Name=WP_223968791.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110704.1;locus_tag=LDO09_RS00555;product=argininosuccinate lyase;protein_id=WP_223968791.1;transl_table=11 NZ_AP024926.1 RefSeq gene 103181 103714 . + . ID=gene-LDO09_RS00560;Name=LDO09_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00560;old_locus_tag=TthAA11_01090 NZ_AP024926.1 Protein Homology CDS 103181 103714 . + 0 ID=cds-WP_223969115.1;Parent=gene-LDO09_RS00560;Dbxref=Genbank:WP_223969115.1;Name=WP_223969115.1;Ontology_term=GO:0006526,GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227829.1;locus_tag=LDO09_RS00560;product=N-acetyltransferase;protein_id=WP_223969115.1;transl_table=11 NZ_AP024926.1 RefSeq gene 103748 104923 . + . ID=gene-LDO09_RS00565;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=LDO09_RS00565;old_locus_tag=TthAA11_01100 NZ_AP024926.1 Protein Homology CDS 103748 104923 . + 0 ID=cds-WP_223965837.1;Parent=gene-LDO09_RS00565;Dbxref=Genbank:WP_223965837.1;Name=WP_223965837.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551519.1;locus_tag=LDO09_RS00565;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_223965837.1;transl_table=11 NZ_AP024926.1 RefSeq gene 104949 106580 . - . ID=gene-LDO09_RS00570;Name=LDO09_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00570;old_locus_tag=TthAA11_01110 NZ_AP024926.1 Protein Homology CDS 104949 106580 . - 0 ID=cds-WP_223968793.1;Parent=gene-LDO09_RS00570;Dbxref=Genbank:WP_223968793.1;Name=WP_223968793.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174070.1;locus_tag=LDO09_RS00570;product=formate--tetrahydrofolate ligase;protein_id=WP_223968793.1;transl_table=11 NZ_AP024926.1 RefSeq gene 106603 107538 . - . ID=gene-LDO09_RS00575;Name=LDO09_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00575;old_locus_tag=TthAA11_01120 NZ_AP024926.1 Protein Homology CDS 106603 107538 . - 0 ID=cds-WP_223968795.1;Parent=gene-LDO09_RS00575;Dbxref=Genbank:WP_223968795.1;Name=WP_223968795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227827.1;locus_tag=LDO09_RS00575;product=threonine/serine dehydratase;protein_id=WP_223968795.1;transl_table=11 NZ_AP024926.1 RefSeq gene 107538 109127 . - . ID=gene-LDO09_RS00580;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=LDO09_RS00580;old_locus_tag=TthAA11_01130 NZ_AP024926.1 Protein Homology CDS 107538 109127 . - 0 ID=cds-WP_011227826.1;Parent=gene-LDO09_RS00580;Dbxref=Genbank:WP_011227826.1;Name=WP_011227826.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509747.1;locus_tag=LDO09_RS00580;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_011227826.1;transl_table=11 NZ_AP024926.1 RefSeq gene 109216 110463 . - . ID=gene-LDO09_RS00585;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=LDO09_RS00585;old_locus_tag=TthAA11_01140 NZ_AP024926.1 Protein Homology CDS 109216 110463 . - 0 ID=cds-WP_223968797.1;Parent=gene-LDO09_RS00585;Dbxref=Genbank:WP_223968797.1;Name=WP_223968797.1;gbkey=CDS;gene=pgi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227825.1;locus_tag=LDO09_RS00585;product=glucose-6-phosphate isomerase;protein_id=WP_223968797.1;transl_table=11 NZ_AP024926.1 RefSeq gene 110619 111656 . + . ID=gene-LDO09_RS12060;Name=LDO09_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12060;old_locus_tag=TthAA11_01150 NZ_AP024926.1 GeneMarkS-2+ CDS 110619 111656 . + 0 ID=cds-WP_267461187.1;Parent=gene-LDO09_RS12060;Dbxref=Genbank:WP_267461187.1;Name=WP_267461187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS12060;product=DUF4129 domain-containing protein;protein_id=WP_267461187.1;transl_table=11 NZ_AP024926.1 RefSeq gene 111620 111880 . + . ID=gene-LDO09_RS00595;Name=LDO09_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00595;old_locus_tag=TthAA11_01160 NZ_AP024926.1 Protein Homology CDS 111620 111880 . + 0 ID=cds-WP_223966709.1;Parent=gene-LDO09_RS00595;Dbxref=Genbank:WP_223966709.1;Name=WP_223966709.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024948.2;locus_tag=LDO09_RS00595;product=DUF4129 domain-containing protein;protein_id=WP_223966709.1;transl_table=11 NZ_AP024926.1 RefSeq gene 111850 112764 . + . ID=gene-LDO09_RS00600;Name=LDO09_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00600;old_locus_tag=TthAA11_01170 NZ_AP024926.1 Protein Homology CDS 111850 112764 . + 0 ID=cds-WP_143584225.1;Parent=gene-LDO09_RS00600;Dbxref=Genbank:WP_143584225.1;Name=WP_143584225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628891.1;locus_tag=LDO09_RS00600;product=MoxR family ATPase;protein_id=WP_143584225.1;transl_table=11 NZ_AP024926.1 RefSeq gene 112765 113835 . + . ID=gene-LDO09_RS00605;Name=LDO09_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00605;old_locus_tag=TthAA11_01180 NZ_AP024926.1 Protein Homology CDS 112765 113835 . + 0 ID=cds-WP_223968799.1;Parent=gene-LDO09_RS00605;Dbxref=Genbank:WP_223968799.1;Name=WP_223968799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628892.1;locus_tag=LDO09_RS00605;product=DUF58 domain-containing protein;protein_id=WP_223968799.1;transl_table=11 NZ_AP024926.1 RefSeq gene 113840 116077 . + . ID=gene-LDO09_RS00610;Name=LDO09_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00610;old_locus_tag=TthAA11_01190 NZ_AP024926.1 Protein Homology CDS 113840 116077 . + 0 ID=cds-WP_223968801.1;Parent=gene-LDO09_RS00610;Dbxref=Genbank:WP_223968801.1;Name=WP_223968801.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174074.1;locus_tag=LDO09_RS00610;product=GNAT family N-acetyltransferase;protein_id=WP_223968801.1;transl_table=11 NZ_AP024926.1 RefSeq gene 116067 116849 . + . ID=gene-LDO09_RS00615;Name=LDO09_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00615;old_locus_tag=TthAA11_01200 NZ_AP024926.1 Protein Homology CDS 116067 116849 . + 0 ID=cds-WP_223968803.1;Parent=gene-LDO09_RS00615;Dbxref=Genbank:WP_223968803.1;Name=WP_223968803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227823.1;locus_tag=LDO09_RS00615;product=RNA methyltransferase;protein_id=WP_223968803.1;transl_table=11 NZ_AP024926.1 RefSeq gene 116947 117252 . + . ID=gene-LDO09_RS00620;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=LDO09_RS00620;old_locus_tag=TthAA11_01210 NZ_AP024926.1 Protein Homology CDS 116947 117252 . + 0 ID=cds-WP_011174076.1;Parent=gene-LDO09_RS00620;Dbxref=Genbank:WP_011174076.1;Name=WP_011174076.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174076.1;locus_tag=LDO09_RS00620;product=co-chaperone GroES;protein_id=WP_011174076.1;transl_table=11 NZ_AP024926.1 RefSeq gene 117265 118896 . + . ID=gene-LDO09_RS00625;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LDO09_RS00625;old_locus_tag=TthAA11_01220 NZ_AP024926.1 Protein Homology CDS 117265 118896 . + 0 ID=cds-WP_011174077.1;Parent=gene-LDO09_RS00625;Dbxref=Genbank:WP_011174077.1;Name=WP_011174077.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003049018.1;locus_tag=LDO09_RS00625;product=chaperonin GroEL;protein_id=WP_011174077.1;transl_table=11 NZ_AP024926.1 RefSeq gene 118960 120492 . - . ID=gene-LDO09_RS00630;Name=LDO09_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00630;old_locus_tag=TthAA11_01230 NZ_AP024926.1 Protein Homology CDS 118960 120492 . - 0 ID=cds-WP_143584236.1;Parent=gene-LDO09_RS00630;Dbxref=Genbank:WP_143584236.1;Name=WP_143584236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174078.1;locus_tag=LDO09_RS00630;product=thermostable carboxypeptidase 1;protein_id=WP_143584236.1;transl_table=11 NZ_AP024926.1 RefSeq gene 120570 121640 . + . ID=gene-LDO09_RS00635;Name=LDO09_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00635;old_locus_tag=TthAA11_01240 NZ_AP024926.1 Protein Homology CDS 120570 121640 . + 0 ID=cds-WP_143584238.1;Parent=gene-LDO09_RS00635;Dbxref=Genbank:WP_143584238.1;Name=WP_143584238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461499.1;locus_tag=LDO09_RS00635;product=A24 family peptidase;protein_id=WP_143584238.1;transl_table=11 NZ_AP024926.1 RefSeq gene 121678 122181 . + . ID=gene-LDO09_RS00640;Name=LDO09_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00640;old_locus_tag=TthAA11_01250 NZ_AP024926.1 Protein Homology CDS 121678 122181 . + 0 ID=cds-WP_223968805.1;Parent=gene-LDO09_RS00640;Dbxref=Genbank:WP_223968805.1;Name=WP_223968805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227820.1;locus_tag=LDO09_RS00640;product=DUF2939 domain-containing protein;protein_id=WP_223968805.1;transl_table=11 NZ_AP024926.1 RefSeq gene 122195 123115 . + . ID=gene-LDO09_RS00645;Name=LDO09_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00645;old_locus_tag=TthAA11_01260 NZ_AP024926.1 Protein Homology CDS 122195 123115 . + 0 ID=cds-WP_143584244.1;Parent=gene-LDO09_RS00645;Dbxref=Genbank:WP_143584244.1;Name=WP_143584244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509754.1;locus_tag=LDO09_RS00645;product=nitroreductase family protein;protein_id=WP_143584244.1;transl_table=11 NZ_AP024926.1 RefSeq gene 123069 123845 . - . ID=gene-LDO09_RS00650;Name=LDO09_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00650;old_locus_tag=TthAA11_01270 NZ_AP024926.1 Protein Homology CDS 123069 123845 . - 0 ID=cds-WP_014509755.1;Parent=gene-LDO09_RS00650;Dbxref=Genbank:WP_014509755.1;Name=WP_014509755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628899.1;locus_tag=LDO09_RS00650;product=C40 family peptidase;protein_id=WP_014509755.1;transl_table=11 NZ_AP024926.1 RefSeq gene 123846 124604 . - . ID=gene-LDO09_RS00655;Name=LDO09_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00655;old_locus_tag=TthAA11_01280 NZ_AP024926.1 Protein Homology CDS 123846 124604 . - 0 ID=cds-WP_041443621.1;Parent=gene-LDO09_RS00655;Dbxref=Genbank:WP_041443621.1;Name=WP_041443621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630433.1;locus_tag=LDO09_RS00655;product=DUF721 domain-containing protein;protein_id=WP_041443621.1;transl_table=11 NZ_AP024926.1 RefSeq gene 124589 125620 . - . ID=gene-LDO09_RS00660;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=LDO09_RS00660;old_locus_tag=TthAA11_01290 NZ_AP024926.1 Protein Homology CDS 124589 125620 . - 0 ID=cds-WP_223968807.1;Parent=gene-LDO09_RS00660;Dbxref=Genbank:WP_223968807.1;Name=WP_223968807.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628901.1;locus_tag=LDO09_RS00660;product=DNA replication and repair protein RecF;protein_id=WP_223968807.1;transl_table=11 NZ_AP024926.1 RefSeq gene 125622 126794 . - . ID=gene-LDO09_RS00665;Name=LDO09_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00665;old_locus_tag=TthAA11_01300 NZ_AP024926.1 Protein Homology CDS 125622 126794 . - 0 ID=cds-WP_143584253.1;Parent=gene-LDO09_RS00665;Dbxref=Genbank:WP_143584253.1;Name=WP_143584253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630438.1;locus_tag=LDO09_RS00665;product=MFS transporter;protein_id=WP_143584253.1;transl_table=11 NZ_AP024926.1 RefSeq gene 126804 127586 . - . ID=gene-LDO09_RS00670;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LDO09_RS00670;old_locus_tag=TthAA11_01310 NZ_AP024926.1 Protein Homology CDS 126804 127586 . - 0 ID=cds-WP_143584255.1;Parent=gene-LDO09_RS00670;Dbxref=Genbank:WP_143584255.1;Name=WP_143584255.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462178.1;locus_tag=LDO09_RS00670;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_143584255.1;transl_table=11 NZ_AP024926.1 RefSeq gene 127587 128432 . - . ID=gene-LDO09_RS00675;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LDO09_RS00675;old_locus_tag=TthAA11_01320 NZ_AP024926.1 Protein Homology CDS 127587 128432 . - 0 ID=cds-WP_143584258.1;Parent=gene-LDO09_RS00675;Dbxref=Genbank:WP_143584258.1;Name=WP_143584258.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716046.1;locus_tag=LDO09_RS00675;product=phosphate ABC transporter permease PstA;protein_id=WP_143584258.1;transl_table=11 NZ_AP024926.1 RefSeq gene 128429 129376 . - . ID=gene-LDO09_RS00680;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LDO09_RS00680;old_locus_tag=TthAA11_01330 NZ_AP024926.1 Protein Homology CDS 128429 129376 . - 0 ID=cds-WP_223968809.1;Parent=gene-LDO09_RS00680;Dbxref=Genbank:WP_223968809.1;Name=WP_223968809.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716047.1;locus_tag=LDO09_RS00680;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_223968809.1;transl_table=11 NZ_AP024926.1 RefSeq gene 129440 130516 . - . ID=gene-LDO09_RS00685;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LDO09_RS00685;old_locus_tag=TthAA11_01340 NZ_AP024926.1 Protein Homology CDS 129440 130516 . - 0 ID=cds-WP_223968811.1;Parent=gene-LDO09_RS00685;Dbxref=Genbank:WP_223968811.1;Name=WP_223968811.1;Ontology_term=GO:0015415,GO:0042301,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=pstS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013014767.1;locus_tag=LDO09_RS00685;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_223968811.1;transl_table=11 NZ_AP024926.1 RefSeq gene 130553 131656 . - . ID=gene-LDO09_RS00690;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LDO09_RS00690;old_locus_tag=TthAA11_01350 NZ_AP024926.1 Protein Homology CDS 130553 131656 . - 0 ID=cds-WP_223965850.1;Parent=gene-LDO09_RS00690;Dbxref=Genbank:WP_223965850.1;Name=WP_223965850.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174090.1;locus_tag=LDO09_RS00690;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_223965850.1;transl_table=11 NZ_AP024926.1 RefSeq gene 131653 132534 . - . ID=gene-LDO09_RS00695;Name=LDO09_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00695;old_locus_tag=TthAA11_01360 NZ_AP024926.1 Protein Homology CDS 131653 132534 . - 0 ID=cds-WP_223968813.1;Parent=gene-LDO09_RS00695;Dbxref=Genbank:WP_223968813.1;Name=WP_223968813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509762.1;locus_tag=LDO09_RS00695;product=DUF1385 domain-containing protein;protein_id=WP_223968813.1;transl_table=11 NZ_AP024926.1 RefSeq gene 132575 133960 . + . ID=gene-LDO09_RS00700;Name=LDO09_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00700;old_locus_tag=TthAA11_01370 NZ_AP024926.1 Protein Homology CDS 132575 133960 . + 0 ID=cds-WP_172619149.1;Parent=gene-LDO09_RS00700;Dbxref=Genbank:WP_172619149.1;Name=WP_172619149.1;Ontology_term=GO:0006508,GO:0030145,GO:0070006;gbkey=CDS;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509763.1;locus_tag=LDO09_RS00700;product=leucyl aminopeptidase;protein_id=WP_172619149.1;transl_table=11 NZ_AP024926.1 RefSeq gene 134045 134488 . - . ID=gene-LDO09_RS00705;Name=LDO09_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00705;old_locus_tag=TthAA11_01380 NZ_AP024926.1 Protein Homology CDS 134045 134488 . - 0 ID=cds-WP_223968815.1;Parent=gene-LDO09_RS00705;Dbxref=Genbank:WP_223968815.1;Name=WP_223968815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628910.1;locus_tag=LDO09_RS00705;product=Fur family transcriptional regulator;protein_id=WP_223968815.1;transl_table=11 NZ_AP024926.1 RefSeq gene 134600 134884 . + . ID=gene-LDO09_RS00710;Name=LDO09_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00710;old_locus_tag=TthAA11_01390 NZ_AP024926.1 Protein Homology CDS 134600 134884 . + 0 ID=cds-WP_014509764.1;Parent=gene-LDO09_RS00710;Dbxref=Genbank:WP_014509764.1;Name=WP_014509764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509764.1;locus_tag=LDO09_RS00710;product=septum formation initiator family protein;protein_id=WP_014509764.1;transl_table=11 NZ_AP024926.1 RefSeq gene 134881 135138 . + . ID=gene-LDO09_RS00715;Name=LDO09_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00715;old_locus_tag=TthAA11_01400 NZ_AP024926.1 Protein Homology CDS 134881 135138 . + 0 ID=cds-WP_011174095.1;Parent=gene-LDO09_RS00715;Dbxref=Genbank:WP_011174095.1;Name=WP_011174095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174095.1;locus_tag=LDO09_RS00715;product=hypothetical protein;protein_id=WP_011174095.1;transl_table=11 NZ_AP024926.1 RefSeq gene 135140 136435 . - . ID=gene-LDO09_RS00720;Name=LDO09_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00720;old_locus_tag=TthAA11_01410 NZ_AP024926.1 Protein Homology CDS 135140 136435 . - 0 ID=cds-WP_143584275.1;Parent=gene-LDO09_RS00720;Dbxref=Genbank:WP_143584275.1;Name=WP_143584275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509765.1;locus_tag=LDO09_RS00720;product=MBL fold metallo-hydrolase;protein_id=WP_143584275.1;transl_table=11 NZ_AP024926.1 RefSeq gene 136506 136581 . + . ID=gene-LDO09_RS00725;Name=LDO09_RS00725;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS00725;old_locus_tag=TthAA11_t00070 NZ_AP024926.1 tRNAscan-SE tRNA 136506 136581 . + . ID=rna-LDO09_RS00725;Parent=gene-LDO09_RS00725;anticodon=(pos:136539..136541);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00725;product=tRNA-Thr NZ_AP024926.1 tRNAscan-SE exon 136506 136581 . + . ID=exon-LDO09_RS00725-1;Parent=rna-LDO09_RS00725;anticodon=(pos:136539..136541);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00725;product=tRNA-Thr NZ_AP024926.1 RefSeq gene 136595 136680 . + . ID=gene-LDO09_RS00730;Name=LDO09_RS00730;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS00730;old_locus_tag=TthAA11_t00080 NZ_AP024926.1 tRNAscan-SE tRNA 136595 136680 . + . ID=rna-LDO09_RS00730;Parent=gene-LDO09_RS00730;anticodon=(pos:136629..136631);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00730;product=tRNA-Tyr NZ_AP024926.1 tRNAscan-SE exon 136595 136680 . + . ID=exon-LDO09_RS00730-1;Parent=rna-LDO09_RS00730;anticodon=(pos:136629..136631);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00730;product=tRNA-Tyr NZ_AP024926.1 RefSeq gene 136707 136782 . + . ID=gene-LDO09_RS00735;Name=LDO09_RS00735;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS00735;old_locus_tag=TthAA11_t00090 NZ_AP024926.1 tRNAscan-SE tRNA 136707 136782 . + . ID=rna-LDO09_RS00735;Parent=gene-LDO09_RS00735;anticodon=(pos:136740..136742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00735;product=tRNA-Gly NZ_AP024926.1 tRNAscan-SE exon 136707 136782 . + . ID=exon-LDO09_RS00735-1;Parent=rna-LDO09_RS00735;anticodon=(pos:136740..136742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00735;product=tRNA-Gly NZ_AP024926.1 RefSeq gene 136786 136861 . + . ID=gene-LDO09_RS00740;Name=LDO09_RS00740;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS00740;old_locus_tag=TthAA11_t00100 NZ_AP024926.1 tRNAscan-SE tRNA 136786 136861 . + . ID=rna-LDO09_RS00740;Parent=gene-LDO09_RS00740;anticodon=(pos:136819..136821);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00740;product=tRNA-Thr NZ_AP024926.1 tRNAscan-SE exon 136786 136861 . + . ID=exon-LDO09_RS00740-1;Parent=rna-LDO09_RS00740;anticodon=(pos:136819..136821);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00740;product=tRNA-Thr NZ_AP024926.1 RefSeq gene 136919 138139 . + . ID=gene-LDO09_RS00745;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LDO09_RS00745;old_locus_tag=TthAA11_01420 NZ_AP024926.1 Protein Homology CDS 136919 138139 . + 0 ID=cds-WP_143584279.1;Parent=gene-LDO09_RS00745;Dbxref=Genbank:WP_143584279.1;Name=WP_143584279.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003640798.1;locus_tag=LDO09_RS00745;product=elongation factor Tu;protein_id=WP_143584279.1;transl_table=11 NZ_AP024926.1 RefSeq gene 138184 138348 . + . ID=gene-LDO09_RS00750;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LDO09_RS00750;old_locus_tag=TthAA11_01430 NZ_AP024926.1 Protein Homology CDS 138184 138348 . + 0 ID=cds-WP_008630505.1;Parent=gene-LDO09_RS00750;Dbxref=Genbank:WP_008630505.1;Name=WP_008630505.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330137.1;locus_tag=LDO09_RS00750;product=50S ribosomal protein L33;protein_id=WP_008630505.1;transl_table=11 NZ_AP024926.1 RefSeq gene 138348 138530 . + . ID=gene-LDO09_RS00755;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LDO09_RS00755;old_locus_tag=TthAA11_01440 NZ_AP024926.1 Protein Homology CDS 138348 138530 . + 0 ID=cds-WP_008630510.1;Parent=gene-LDO09_RS00755;Dbxref=Genbank:WP_008630510.1;Name=WP_008630510.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516504.1;locus_tag=LDO09_RS00755;product=preprotein translocase subunit SecE;protein_id=WP_008630510.1;transl_table=11 NZ_AP024926.1 RefSeq gene 138527 139081 . + . ID=gene-LDO09_RS00760;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LDO09_RS00760;old_locus_tag=TthAA11_01450 NZ_AP024926.1 Protein Homology CDS 138527 139081 . + 0 ID=cds-WP_008630512.1;Parent=gene-LDO09_RS00760;Dbxref=Genbank:WP_008630512.1;Name=WP_008630512.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516503.1;locus_tag=LDO09_RS00760;product=transcription termination/antitermination protein NusG;protein_id=WP_008630512.1;transl_table=11 NZ_AP024926.1 RefSeq gene 139125 139568 . + . ID=gene-LDO09_RS00765;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LDO09_RS00765;old_locus_tag=TthAA11_01460 NZ_AP024926.1 Protein Homology CDS 139125 139568 . + 0 ID=cds-WP_011174097.1;Parent=gene-LDO09_RS00765;Dbxref=Genbank:WP_011174097.1;Name=WP_011174097.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174097.1;locus_tag=LDO09_RS00765;product=50S ribosomal protein L11;protein_id=WP_011174097.1;transl_table=11 NZ_AP024926.1 RefSeq gene 139561 140250 . + . ID=gene-LDO09_RS00770;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LDO09_RS00770;old_locus_tag=TthAA11_01470 NZ_AP024926.1 Protein Homology CDS 139561 140250 . + 0 ID=cds-WP_011227804.1;Parent=gene-LDO09_RS00770;Dbxref=Genbank:WP_011227804.1;Name=WP_011227804.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227804.1;locus_tag=LDO09_RS00770;product=50S ribosomal protein L1;protein_id=WP_011227804.1;transl_table=11 NZ_AP024926.1 RefSeq gene 140336 140411 . + . ID=gene-LDO09_RS00775;Name=LDO09_RS00775;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS00775;old_locus_tag=TthAA11_t00110 NZ_AP024926.1 tRNAscan-SE tRNA 140336 140411 . + . ID=rna-LDO09_RS00775;Parent=gene-LDO09_RS00775;anticodon=(pos:140369..140371);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00775;product=tRNA-Asn NZ_AP024926.1 tRNAscan-SE exon 140336 140411 . + . ID=exon-LDO09_RS00775-1;Parent=rna-LDO09_RS00775;anticodon=(pos:140369..140371);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS00775;product=tRNA-Asn NZ_AP024926.1 RefSeq gene 140511 140816 . + . ID=gene-LDO09_RS00780;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LDO09_RS00780;old_locus_tag=TthAA11_01480 NZ_AP024926.1 Protein Homology CDS 140511 140816 . + 0 ID=cds-WP_011174099.1;Parent=gene-LDO09_RS00780;Dbxref=Genbank:WP_011174099.1;Name=WP_011174099.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174099.1;locus_tag=LDO09_RS00780;product=30S ribosomal protein S6;protein_id=WP_011174099.1;transl_table=11 NZ_AP024926.1 RefSeq gene 140826 141617 . + . ID=gene-LDO09_RS00785;Name=LDO09_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00785;old_locus_tag=TthAA11_01490 NZ_AP024926.1 Protein Homology CDS 140826 141617 . + 0 ID=cds-WP_143584288.1;Parent=gene-LDO09_RS00785;Dbxref=Genbank:WP_143584288.1;Name=WP_143584288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227803.1;locus_tag=LDO09_RS00785;product=single-stranded DNA-binding protein;protein_id=WP_143584288.1;transl_table=11 NZ_AP024926.1 RefSeq gene 141614 141880 . + . ID=gene-LDO09_RS00790;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LDO09_RS00790;old_locus_tag=TthAA11_01500 NZ_AP024926.1 Protein Homology CDS 141614 141880 . + 0 ID=cds-WP_008630522.1;Parent=gene-LDO09_RS00790;Dbxref=Genbank:WP_008630522.1;Name=WP_008630522.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630522.1;locus_tag=LDO09_RS00790;product=30S ribosomal protein S18;protein_id=WP_008630522.1;transl_table=11 NZ_AP024926.1 RefSeq gene 141891 142337 . + . ID=gene-LDO09_RS00795;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LDO09_RS00795;old_locus_tag=TthAA11_01510 NZ_AP024926.1 Protein Homology CDS 141891 142337 . + 0 ID=cds-WP_011174101.1;Parent=gene-LDO09_RS00795;Dbxref=Genbank:WP_011174101.1;Name=WP_011174101.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630523.1;locus_tag=LDO09_RS00795;product=50S ribosomal protein L9;protein_id=WP_011174101.1;transl_table=11 NZ_AP024926.1 RefSeq gene 142349 143641 . - . ID=gene-LDO09_RS00800;Name=LDO09_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00800;old_locus_tag=TthAA11_01520 NZ_AP024926.1 Protein Homology CDS 142349 143641 . - 0 ID=cds-WP_124105468.1;Parent=gene-LDO09_RS00800;Dbxref=Genbank:WP_124105468.1;Name=WP_124105468.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174102.1;locus_tag=LDO09_RS00800;product=alpha-hydroxy-acid oxidizing protein;protein_id=WP_124105468.1;transl_table=11 NZ_AP024926.1 RefSeq gene 143652 145214 . - . ID=gene-LDO09_RS00805;Name=LDO09_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00805;old_locus_tag=TthAA11_01530 NZ_AP024926.1 Protein Homology CDS 143652 145214 . - 0 ID=cds-WP_143584291.1;Parent=gene-LDO09_RS00805;Dbxref=Genbank:WP_143584291.1;Name=WP_143584291.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048319.1;locus_tag=LDO09_RS00805;product=IS200/IS605 family accessory protein TnpB-related protein;protein_id=WP_143584291.1;transl_table=11 NZ_AP024926.1 RefSeq gene 145186 145818 . - . ID=gene-LDO09_RS00810;Name=LDO09_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00810;old_locus_tag=TthAA11_01540 NZ_AP024926.1 Protein Homology CDS 145186 145818 . - 0 ID=cds-WP_143584294.1;Parent=gene-LDO09_RS00810;Dbxref=Genbank:WP_143584294.1;Name=WP_143584294.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015907335.1;locus_tag=LDO09_RS00810;product=IS607 family transposase;protein_id=WP_143584294.1;transl_table=11 NZ_AP024926.1 RefSeq gene 145928 146755 . + . ID=gene-LDO09_RS00815;Name=LDO09_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00815;old_locus_tag=TthAA11_01550 NZ_AP024926.1 Protein Homology CDS 145928 146755 . + 0 ID=cds-WP_143584297.1;Parent=gene-LDO09_RS00815;Dbxref=Genbank:WP_143584297.1;Name=WP_143584297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516438.1;locus_tag=LDO09_RS00815;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_143584297.1;transl_table=11 NZ_AP024926.1 RefSeq gene 146811 147464 . + . ID=gene-LDO09_RS00820;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LDO09_RS00820;old_locus_tag=TthAA11_01560 NZ_AP024926.1 Protein Homology CDS 146811 147464 . + 0 ID=cds-WP_011174104.1;Parent=gene-LDO09_RS00820;Dbxref=Genbank:WP_011174104.1;Name=WP_011174104.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174104.1;locus_tag=LDO09_RS00820;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_011174104.1;transl_table=11 NZ_AP024926.1 RefSeq gene 147454 148425 . + . ID=gene-LDO09_RS00825;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LDO09_RS00825;old_locus_tag=TthAA11_01570 NZ_AP024926.1 Protein Homology CDS 147454 148425 . + 0 ID=cds-WP_143584300.1;Parent=gene-LDO09_RS00825;Dbxref=Genbank:WP_143584300.1;Name=WP_143584300.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630527.1;locus_tag=LDO09_RS00825;product=lipoyl synthase;protein_id=WP_143584300.1;transl_table=11 NZ_AP024926.1 RefSeq gene 148422 148781 . + . ID=gene-LDO09_RS00830;Name=LDO09_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00830;old_locus_tag=TthAA11_01580 NZ_AP024926.1 Protein Homology CDS 148422 148781 . + 0 ID=cds-WP_143584303.1;Parent=gene-LDO09_RS00830;Dbxref=Genbank:WP_143584303.1;Name=WP_143584303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509769.1;locus_tag=LDO09_RS00830;product=DUF3054 domain-containing protein;protein_id=WP_143584303.1;transl_table=11 NZ_AP024926.1 RefSeq gene 148791 149660 . + . ID=gene-LDO09_RS00835;Name=LDO09_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00835;old_locus_tag=TthAA11_01590 NZ_AP024926.1 Protein Homology CDS 148791 149660 . + 0 ID=cds-WP_143584305.1;Parent=gene-LDO09_RS00835;Dbxref=Genbank:WP_143584305.1;Name=WP_143584305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628917.1;locus_tag=LDO09_RS00835;product=NAD(P)-dependent oxidoreductase;protein_id=WP_143584305.1;transl_table=11 NZ_AP024926.1 RefSeq gene 149839 150084 . + . ID=gene-LDO09_RS00840;Name=LDO09_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00840;old_locus_tag=TthAA11_01600 NZ_AP024926.1 Protein Homology CDS 149839 150084 . + 0 ID=cds-WP_008630541.1;Parent=gene-LDO09_RS00840;Dbxref=Genbank:WP_008630541.1;Name=WP_008630541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630541.1;locus_tag=LDO09_RS00840;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_008630541.1;transl_table=11 NZ_AP024926.1 RefSeq gene 150086 150493 . + . ID=gene-LDO09_RS00845;Name=LDO09_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00845;old_locus_tag=TthAA11_01610 NZ_AP024926.1 Protein Homology CDS 150086 150493 . + 0 ID=cds-WP_223965855.1;Parent=gene-LDO09_RS00845;Dbxref=Genbank:WP_223965855.1;Name=WP_223965855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630542.1;locus_tag=LDO09_RS00845;product=PIN domain-containing protein;protein_id=WP_223965855.1;transl_table=11 NZ_AP024926.1 RefSeq gene 150655 150906 . + . ID=gene-LDO09_RS00850;Name=LDO09_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00850;old_locus_tag=TthAA11_01620 NZ_AP024926.1 Protein Homology CDS 150655 150906 . + 0 ID=cds-WP_143584310.1;Parent=gene-LDO09_RS00850;Dbxref=Genbank:WP_143584310.1;Name=WP_143584310.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024949.2;locus_tag=LDO09_RS00850;product=helix-turn-helix transcriptional regulator;protein_id=WP_143584310.1;transl_table=11 NZ_AP024926.1 RefSeq gene 150971 152371 . + . ID=gene-LDO09_RS00855;Name=LDO09_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00855;old_locus_tag=TthAA11_01630 NZ_AP024926.1 Protein Homology CDS 150971 152371 . + 0 ID=cds-WP_223965856.1;Parent=gene-LDO09_RS00855;Dbxref=Genbank:WP_223965856.1;Name=WP_223965856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630544.1;locus_tag=LDO09_RS00855;product=class I SAM-dependent methyltransferase;protein_id=WP_223965856.1;transl_table=11 NZ_AP024926.1 RefSeq gene 152368 153018 . + . ID=gene-LDO09_RS00860;Name=LDO09_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00860;old_locus_tag=TthAA11_01640 NZ_AP024926.1 Protein Homology CDS 152368 153018 . + 0 ID=cds-WP_223965857.1;Parent=gene-LDO09_RS00860;Dbxref=Genbank:WP_223965857.1;Name=WP_223965857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174109.1;locus_tag=LDO09_RS00860;product=AzlC family ABC transporter permease;protein_id=WP_223965857.1;transl_table=11 NZ_AP024926.1 RefSeq gene 153015 153287 . + . ID=gene-LDO09_RS00865;Name=LDO09_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00865;old_locus_tag=TthAA11_01650 NZ_AP024926.1 Protein Homology CDS 153015 153287 . + 0 ID=cds-WP_014509771.1;Parent=gene-LDO09_RS00865;Dbxref=Genbank:WP_014509771.1;Name=WP_014509771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628924.1;locus_tag=LDO09_RS00865;product=AzlD domain-containing protein;protein_id=WP_014509771.1;transl_table=11 NZ_AP024926.1 RefSeq gene 153284 154669 . - . ID=gene-LDO09_RS00870;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LDO09_RS00870;old_locus_tag=TthAA11_01660 NZ_AP024926.1 Protein Homology CDS 153284 154669 . - 0 ID=cds-WP_223968817.1;Parent=gene-LDO09_RS00870;Dbxref=Genbank:WP_223968817.1;Name=WP_223968817.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550434.1;locus_tag=LDO09_RS00870;product=dihydrolipoyl dehydrogenase;protein_id=WP_223968817.1;transl_table=11 NZ_AP024926.1 RefSeq gene 154680 156035 . - . ID=gene-LDO09_RS00875;Name=LDO09_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00875;old_locus_tag=TthAA11_01670 NZ_AP024926.1 Protein Homology CDS 154680 156035 . - 0 ID=cds-WP_223968819.1;Parent=gene-LDO09_RS00875;Dbxref=Genbank:WP_223968819.1;Name=WP_223968819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509773.1;locus_tag=LDO09_RS00875;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_223968819.1;transl_table=11 NZ_AP024926.1 RefSeq gene 156046 156225 . - . ID=gene-LDO09_RS00880;Name=LDO09_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00880;old_locus_tag=TthAA11_01680 NZ_AP024926.1 Protein Homology CDS 156046 156225 . - 0 ID=cds-WP_242004652.1;Parent=gene-LDO09_RS00880;Dbxref=Genbank:WP_242004652.1;Name=WP_242004652.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019540.2;locus_tag=LDO09_RS00880;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_242004652.1;transl_table=11 NZ_AP024926.1 RefSeq gene 156288 156491 . - . ID=gene-LDO09_RS00885;Name=LDO09_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00885;old_locus_tag=TthAA11_01690 NZ_AP024926.1 Protein Homology CDS 156288 156491 . - 0 ID=cds-WP_014628928.1;Parent=gene-LDO09_RS00885;Dbxref=Genbank:WP_014628928.1;Name=WP_014628928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628928.1;locus_tag=LDO09_RS00885;product=2-oxoisovalerate dehydrogenase E1 subunit beta;protein_id=WP_014628928.1;transl_table=11 NZ_AP024926.1 RefSeq gene 156494 157468 . - . ID=gene-LDO09_RS00890;Name=LDO09_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00890;old_locus_tag=TthAA11_01700 NZ_AP024926.1 Protein Homology CDS 156494 157468 . - 0 ID=cds-WP_008630550.1;Parent=gene-LDO09_RS00890;Dbxref=Genbank:WP_008630550.1;Name=WP_008630550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716164.1;locus_tag=LDO09_RS00890;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_008630550.1;transl_table=11 NZ_AP024926.1 RefSeq gene 157478 158581 . - . ID=gene-LDO09_RS00895;Name=LDO09_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00895;old_locus_tag=TthAA11_01710 NZ_AP024926.1 Protein Homology CDS 157478 158581 . - 0 ID=cds-WP_008630552.1;Parent=gene-LDO09_RS00895;Dbxref=Genbank:WP_008630552.1;Name=WP_008630552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716165.1;locus_tag=LDO09_RS00895;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_008630552.1;transl_table=11 NZ_AP024926.1 RefSeq gene 158712 159125 . + . ID=gene-LDO09_RS00900;Name=LDO09_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00900;old_locus_tag=TthAA11_01720 NZ_AP024926.1 Protein Homology CDS 158712 159125 . + 0 ID=cds-WP_011227792.1;Parent=gene-LDO09_RS00900;Dbxref=Genbank:WP_011227792.1;Name=WP_011227792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227792.1;locus_tag=LDO09_RS00900;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_011227792.1;transl_table=11 NZ_AP024926.1 RefSeq gene 159122 159514 . + . ID=gene-LDO09_RS00905;Name=LDO09_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00905;old_locus_tag=TthAA11_01730 NZ_AP024926.1 Protein Homology CDS 159122 159514 . + 0 ID=cds-WP_223968821.1;Parent=gene-LDO09_RS00905;Dbxref=Genbank:WP_223968821.1;Name=WP_223968821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227791.1;locus_tag=LDO09_RS00905;product=metallopeptidase family protein;protein_id=WP_223968821.1;transl_table=11 NZ_AP024926.1 RefSeq gene 159465 159890 . - . ID=gene-LDO09_RS00910;Name=LDO09_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00910;old_locus_tag=TthAA11_01740 NZ_AP024926.1 Protein Homology CDS 159465 159890 . - 0 ID=cds-WP_008630557.1;Parent=gene-LDO09_RS00910;Dbxref=Genbank:WP_008630557.1;Name=WP_008630557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550426.1;locus_tag=LDO09_RS00910;product=DUF2203 domain-containing protein;protein_id=WP_008630557.1;transl_table=11 NZ_AP024926.1 RefSeq gene 159989 160873 . - . ID=gene-LDO09_RS00915;Name=LDO09_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00915;old_locus_tag=TthAA11_01750 NZ_AP024926.1 Protein Homology CDS 159989 160873 . - 0 ID=cds-WP_143584328.1;Parent=gene-LDO09_RS00915;Dbxref=Genbank:WP_143584328.1;Name=WP_143584328.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227789.1;locus_tag=LDO09_RS00915;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_143584328.1;transl_table=11 NZ_AP024926.1 RefSeq gene 160877 161923 . - . ID=gene-LDO09_RS00920;Name=LDO09_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00920;old_locus_tag=TthAA11_01760 NZ_AP024926.1 Protein Homology CDS 160877 161923 . - 0 ID=cds-WP_223968823.1;Parent=gene-LDO09_RS00920;Dbxref=Genbank:WP_223968823.1;Name=WP_223968823.1;Ontology_term=GO:0000271,GO:0008879;gbkey=CDS;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628933.1;locus_tag=LDO09_RS00920;product=glucose-1-phosphate thymidylyltransferase;protein_id=WP_223968823.1;transl_table=11 NZ_AP024926.1 RefSeq gene 161957 162748 . + . ID=gene-LDO09_RS00925;Name=LDO09_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00925;old_locus_tag=TthAA11_01770 NZ_AP024926.1 Protein Homology CDS 161957 162748 . + 0 ID=cds-WP_223965861.1;Parent=gene-LDO09_RS00925;Dbxref=Genbank:WP_223965861.1;Name=WP_223965861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227787.1;locus_tag=LDO09_RS00925;product=class I SAM-dependent methyltransferase;protein_id=WP_223965861.1;transl_table=11 NZ_AP024926.1 RefSeq gene 162753 163979 . - . ID=gene-LDO09_RS00930;Name=LDO09_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00930;old_locus_tag=TthAA11_01780 NZ_AP024926.1 Protein Homology CDS 162753 163979 . - 0 ID=cds-WP_143584334.1;Parent=gene-LDO09_RS00930;Dbxref=Genbank:WP_143584334.1;Name=WP_143584334.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550733.1;locus_tag=LDO09_RS00930;product=adenylosuccinate synthase;protein_id=WP_143584334.1;transl_table=11 NZ_AP024926.1 RefSeq gene 164076 164744 . - . ID=gene-LDO09_RS00935;Name=LDO09_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00935;old_locus_tag=TthAA11_01790 NZ_AP024926.1 Protein Homology CDS 164076 164744 . - 0 ID=cds-WP_014628936.1;Parent=gene-LDO09_RS00935;Dbxref=Genbank:WP_014628936.1;Name=WP_014628936.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628936.1;locus_tag=LDO09_RS00935;product=queuosine precursor transporter;protein_id=WP_014628936.1;transl_table=11 NZ_AP024926.1 RefSeq gene 164741 165286 . - . ID=gene-LDO09_RS00940;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=LDO09_RS00940;old_locus_tag=TthAA11_01800 NZ_AP024926.1 Protein Homology CDS 164741 165286 . - 0 ID=cds-WP_014628937.1;Parent=gene-LDO09_RS00940;Dbxref=Genbank:WP_014628937.1;Name=WP_014628937.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227786.1;locus_tag=LDO09_RS00940;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_014628937.1;transl_table=11 NZ_AP024926.1 RefSeq gene 165283 165990 . - . ID=gene-LDO09_RS00945;Name=LDO09_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00945;old_locus_tag=TthAA11_01810 NZ_AP024926.1 Protein Homology CDS 165283 165990 . - 0 ID=cds-WP_014628938.1;Parent=gene-LDO09_RS00945;Dbxref=Genbank:WP_014628938.1;Name=WP_014628938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628938.1;locus_tag=LDO09_RS00945;product=pseudouridine synthase;protein_id=WP_014628938.1;transl_table=11 NZ_AP024926.1 RefSeq gene 165987 166781 . - . ID=gene-LDO09_RS00950;Name=LDO09_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00950;old_locus_tag=TthAA11_01820 NZ_AP024926.1 Protein Homology CDS 165987 166781 . - 0 ID=cds-WP_223965862.1;Parent=gene-LDO09_RS00950;Dbxref=Genbank:WP_223965862.1;Name=WP_223965862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509781.1;locus_tag=LDO09_RS00950;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_223965862.1;transl_table=11 NZ_AP024926.1 RefSeq gene 166822 167760 . + . ID=gene-LDO09_RS00955;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LDO09_RS00955;old_locus_tag=TthAA11_01830 NZ_AP024926.1 Protein Homology CDS 166822 167760 . + 0 ID=cds-WP_014628940.1;Parent=gene-LDO09_RS00955;Dbxref=Genbank:WP_014628940.1;Name=WP_014628940.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014514862.1;locus_tag=LDO09_RS00955;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_014628940.1;transl_table=11 NZ_AP024926.1 RefSeq gene 167763 168872 . + . ID=gene-LDO09_RS00960;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=LDO09_RS00960;old_locus_tag=TthAA11_01840 NZ_AP024926.1 Protein Homology CDS 167763 168872 . + 0 ID=cds-WP_143584339.1;Parent=gene-LDO09_RS00960;Dbxref=Genbank:WP_143584339.1;Name=WP_143584339.1;Ontology_term=GO:0006522,GO:0000286,GO:0005737;gbkey=CDS;gene=ald;go_component=cytoplasm|0005737||IEA;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227783.1;locus_tag=LDO09_RS00960;product=alanine dehydrogenase;protein_id=WP_143584339.1;transl_table=11 NZ_AP024926.1 RefSeq gene 168875 169216 . + . ID=gene-LDO09_RS00965;Name=LDO09_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00965;old_locus_tag=TthAA11_01850 NZ_AP024926.1 Protein Homology CDS 168875 169216 . + 0 ID=cds-WP_143586901.1;Parent=gene-LDO09_RS00965;Dbxref=Genbank:WP_143586901.1;Name=WP_143586901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718117.1;locus_tag=LDO09_RS00965;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_143586901.1;transl_table=11 NZ_AP024926.1 RefSeq gene 169209 170777 . + . ID=gene-LDO09_RS00970;Name=LDO09_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00970;old_locus_tag=TthAA11_01860 NZ_AP024926.1 Protein Homology CDS 169209 170777 . + 0 ID=cds-WP_143584342.1;Parent=gene-LDO09_RS00970;Dbxref=Genbank:WP_143584342.1;Name=WP_143584342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174130.1;locus_tag=LDO09_RS00970;product=DAK2 domain-containing protein;protein_id=WP_143584342.1;transl_table=11 NZ_AP024926.1 RefSeq gene 170907 171704 . + . ID=gene-LDO09_RS00975;Name=LDO09_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00975;old_locus_tag=TthAA11_01870 NZ_AP024926.1 Protein Homology CDS 170907 171704 . + 0 ID=cds-WP_223968825.1;Parent=gene-LDO09_RS00975;Dbxref=Genbank:WP_223968825.1;Name=WP_223968825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630579.1;locus_tag=LDO09_RS00975;product=hypothetical protein;protein_id=WP_223968825.1;transl_table=11 NZ_AP024926.1 RefSeq gene 171891 172322 . + . ID=gene-LDO09_RS00980;Name=LDO09_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00980;old_locus_tag=TthAA11_01880 NZ_AP024926.1 Protein Homology CDS 171891 172322 . + 0 ID=cds-WP_143584348.1;Parent=gene-LDO09_RS00980;Dbxref=Genbank:WP_143584348.1;Name=WP_143584348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630580.1;locus_tag=LDO09_RS00980;product=3D domain-containing protein;protein_id=WP_143584348.1;transl_table=11 NZ_AP024926.1 RefSeq gene 172344 173459 . + . ID=gene-LDO09_RS00985;Name=LDO09_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS00985;old_locus_tag=TthAA11_01890 NZ_AP024926.1 Protein Homology CDS 172344 173459 . + 0 ID=cds-WP_143584351.1;Parent=gene-LDO09_RS00985;Dbxref=Genbank:WP_143584351.1;Name=WP_143584351.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630581.1;locus_tag=LDO09_RS00985;product=FtsX-like permease family protein;protein_id=WP_143584351.1;transl_table=11 NZ_AP024926.1 RefSeq gene 173509 173886 . - . ID=gene-LDO09_RS00990;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LDO09_RS00990;old_locus_tag=TthAA11_01900 NZ_AP024926.1 Protein Homology CDS 173509 173886 . - 0 ID=cds-WP_143584354.1;Parent=gene-LDO09_RS00990;Dbxref=Genbank:WP_143584354.1;Name=WP_143584354.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599214.1;locus_tag=LDO09_RS00990;product=50S ribosomal protein L7/L12;protein_id=WP_143584354.1;transl_table=11 NZ_AP024926.1 RefSeq gene 173900 174421 . - . ID=gene-LDO09_RS00995;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LDO09_RS00995;old_locus_tag=TthAA11_01910 NZ_AP024926.1 Protein Homology CDS 173900 174421 . - 0 ID=cds-WP_014628945.1;Parent=gene-LDO09_RS00995;Dbxref=Genbank:WP_014628945.1;Name=WP_014628945.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630583.1;locus_tag=LDO09_RS00995;product=50S ribosomal protein L10;protein_id=WP_014628945.1;transl_table=11 NZ_AP024926.1 RefSeq gene 174610 175962 . - . ID=gene-LDO09_RS01000;Name=LDO09_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01000;old_locus_tag=TthAA11_01920 NZ_AP024926.1 Protein Homology CDS 174610 175962 . - 0 ID=cds-WP_143584357.1;Parent=gene-LDO09_RS01000;Dbxref=Genbank:WP_143584357.1;Name=WP_143584357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509786.1;locus_tag=LDO09_RS01000;product=NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta;protein_id=WP_143584357.1;transl_table=11 NZ_AP024926.1 RefSeq gene 175962 176264 . - . ID=gene-LDO09_RS01005;Name=LDO09_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01005;old_locus_tag=TthAA11_01930 NZ_AP024926.1 Protein Homology CDS 175962 176264 . - 0 ID=cds-WP_011174135.1;Parent=gene-LDO09_RS01005;Dbxref=Genbank:WP_011174135.1;Name=WP_011174135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630585.1;locus_tag=LDO09_RS01005;product=proton-translocating transhydrogenase family protein;protein_id=WP_011174135.1;transl_table=11 NZ_AP024926.1 RefSeq gene 176264 177391 . - . ID=gene-LDO09_RS01010;Name=LDO09_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01010;old_locus_tag=TthAA11_01940 NZ_AP024926.1 Protein Homology CDS 176264 177391 . - 0 ID=cds-WP_143584360.1;Parent=gene-LDO09_RS01010;Dbxref=Genbank:WP_143584360.1;Name=WP_143584360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174136.1;locus_tag=LDO09_RS01010;product=NAD(P) transhydrogenase subunit alpha;protein_id=WP_143584360.1;transl_table=11 NZ_AP024926.1 RefSeq gene 177503 178399 . + . ID=gene-LDO09_RS01015;Name=LDO09_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01015;old_locus_tag=TthAA11_01950 NZ_AP024926.1 Protein Homology CDS 177503 178399 . + 0 ID=cds-WP_143584362.1;Parent=gene-LDO09_RS01015;Dbxref=Genbank:WP_143584362.1;Name=WP_143584362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509787.1;locus_tag=LDO09_RS01015;product=DMT family transporter;protein_id=WP_143584362.1;transl_table=11 NZ_AP024926.1 RefSeq gene 178396 179085 . + . ID=gene-LDO09_RS01020;Name=LDO09_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01020;old_locus_tag=TthAA11_01960 NZ_AP024926.1 Protein Homology CDS 178396 179085 . + 0 ID=cds-WP_223968827.1;Parent=gene-LDO09_RS01020;Dbxref=Genbank:WP_223968827.1;Name=WP_223968827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330301.1;locus_tag=LDO09_RS01020;product=DMT family transporter;protein_id=WP_223968827.1;transl_table=11 NZ_AP024926.1 RefSeq gene 179143 180243 . + . ID=gene-LDO09_RS01025;Name=LDO09_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01025;old_locus_tag=TthAA11_01970 NZ_AP024926.1 Protein Homology CDS 179143 180243 . + 0 ID=cds-WP_223968574.1;Parent=gene-LDO09_RS01025;Dbxref=Genbank:WP_223968574.1;Name=WP_223968574.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511178.1;locus_tag=LDO09_RS01025;product=transposase;protein_id=WP_223968574.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 180237 180404 . + . ID=gene-LDO09_RS01030;Name=LDO09_RS01030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS01030;old_locus_tag=TthAA11_01980;partial=true;pseudo=true;start_range=.,180237 NZ_AP024926.1 Protein Homology CDS 180237 180404 . + 0 ID=cds-LDO09_RS01030;Parent=gene-LDO09_RS01030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227776.1;locus_tag=LDO09_RS01030;partial=true;product=EamA family transporter;pseudo=true;start_range=.,180237;transl_table=11 NZ_AP024926.1 RefSeq gene 180406 181545 . + . ID=gene-LDO09_RS01035;Name=LDO09_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01035;old_locus_tag=TthAA11_01990 NZ_AP024926.1 Protein Homology CDS 180406 181545 . + 0 ID=cds-WP_223965867.1;Parent=gene-LDO09_RS01035;Dbxref=Genbank:WP_223965867.1;Name=WP_223965867.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227775.1;locus_tag=LDO09_RS01035;product=MFS transporter;protein_id=WP_223965867.1;transl_table=11 NZ_AP024926.1 RefSeq gene 181527 182621 . - . ID=gene-LDO09_RS01040;Name=LDO09_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01040;old_locus_tag=TthAA11_02000 NZ_AP024926.1 Protein Homology CDS 181527 182621 . - 0 ID=cds-WP_223968830.1;Parent=gene-LDO09_RS01040;Dbxref=Genbank:WP_223968830.1;Name=WP_223968830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174140.1;locus_tag=LDO09_RS01040;product=Fic family protein;protein_id=WP_223968830.1;transl_table=11 NZ_AP024926.1 RefSeq gene 182708 184192 . + . ID=gene-LDO09_RS01045;Name=LDO09_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01045;old_locus_tag=TthAA11_02010 NZ_AP024926.1 Protein Homology CDS 182708 184192 . + 0 ID=cds-WP_011174141.1;Parent=gene-LDO09_RS01045;Dbxref=Genbank:WP_011174141.1;Name=WP_011174141.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174141.1;locus_tag=LDO09_RS01045;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_011174141.1;transl_table=11 NZ_AP024926.1 RefSeq gene 184189 186201 . - . ID=gene-LDO09_RS01050;Name=LDO09_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01050;old_locus_tag=TthAA11_02020 NZ_AP024926.1 Protein Homology CDS 184189 186201 . - 0 ID=cds-WP_223968832.1;Parent=gene-LDO09_RS01050;Dbxref=Genbank:WP_223968832.1;Name=WP_223968832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509790.1;locus_tag=LDO09_RS01050;product=molybdopterin oxidoreductase family protein;protein_id=WP_223968832.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 186206 186469 . - . ID=gene-LDO09_RS01055;Name=LDO09_RS01055;end_range=186469,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS01055;old_locus_tag=TthAA11_02030;partial=true;pseudo=true NZ_AP024926.1 Protein Homology CDS 186206 186469 . - 0 ID=cds-LDO09_RS01055;Parent=gene-LDO09_RS01055;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=186469,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227772.1;locus_tag=LDO09_RS01055;partial=true;product=carboxylesterase/lipase family protein;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 186539 187150 . + . ID=gene-LDO09_RS01060;Name=LDO09_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01060;old_locus_tag=TthAA11_02040 NZ_AP024926.1 Protein Homology CDS 186539 187150 . + 0 ID=cds-WP_143584380.1;Parent=gene-LDO09_RS01060;Dbxref=Genbank:WP_143584380.1;Name=WP_143584380.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227771.1;locus_tag=LDO09_RS01060;product=ribonuclease HII;protein_id=WP_143584380.1;transl_table=11 NZ_AP024926.1 RefSeq gene 187190 187669 . + . ID=gene-LDO09_RS01065;Name=LDO09_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01065;old_locus_tag=TthAA11_02050 NZ_AP024926.1 Protein Homology CDS 187190 187669 . + 0 ID=cds-WP_143584382.1;Parent=gene-LDO09_RS01065;Dbxref=Genbank:WP_143584382.1;Name=WP_143584382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509792.1;locus_tag=LDO09_RS01065;product=DUF4384 domain-containing protein;protein_id=WP_143584382.1;transl_table=11 NZ_AP024926.1 RefSeq gene 187736 188815 . + . ID=gene-LDO09_RS01070;Name=LDO09_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01070;old_locus_tag=TthAA11_02060 NZ_AP024926.1 Protein Homology CDS 187736 188815 . + 0 ID=cds-WP_143584385.1;Parent=gene-LDO09_RS01070;Dbxref=Genbank:WP_143584385.1;Name=WP_143584385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509793.1;locus_tag=LDO09_RS01070;product=TRAP transporter substrate-binding protein;protein_id=WP_143584385.1;transl_table=11 NZ_AP024926.1 RefSeq gene 188882 190381 . - . ID=gene-LDO09_RS01075;Name=LDO09_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01075;old_locus_tag=TthAA11_02070 NZ_AP024926.1 Protein Homology CDS 188882 190381 . - 0 ID=cds-WP_223965871.1;Parent=gene-LDO09_RS01075;Dbxref=Genbank:WP_223965871.1;Name=WP_223965871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174147.1;locus_tag=LDO09_RS01075;product=TRAP transporter large permease subunit;protein_id=WP_223965871.1;transl_table=11 NZ_AP024926.1 RefSeq gene 190383 190925 . - . ID=gene-LDO09_RS01080;Name=LDO09_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01080;old_locus_tag=TthAA11_02080 NZ_AP024926.1 Protein Homology CDS 190383 190925 . - 0 ID=cds-WP_014509795.1;Parent=gene-LDO09_RS01080;Dbxref=Genbank:WP_014509795.1;Name=WP_014509795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227767.1;locus_tag=LDO09_RS01080;product=TRAP transporter small permease subunit;protein_id=WP_014509795.1;transl_table=11 NZ_AP024926.1 RefSeq gene 191028 192236 . - . ID=gene-LDO09_RS01085;Name=LDO09_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01085;old_locus_tag=TthAA11_02090 NZ_AP024926.1 Protein Homology CDS 191028 192236 . - 0 ID=cds-WP_143584391.1;Parent=gene-LDO09_RS01085;Dbxref=Genbank:WP_143584391.1;Name=WP_143584391.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630783.1;locus_tag=LDO09_RS01085;product=MFS transporter;protein_id=WP_143584391.1;transl_table=11 NZ_AP024926.1 RefSeq gene 192247 193086 . - . ID=gene-LDO09_RS01090;Name=LDO09_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01090;old_locus_tag=TthAA11_02100 NZ_AP024926.1 Protein Homology CDS 192247 193086 . - 0 ID=cds-WP_014628957.1;Parent=gene-LDO09_RS01090;Dbxref=Genbank:WP_014628957.1;Name=WP_014628957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630785.1;locus_tag=LDO09_RS01090;product=universal stress protein;protein_id=WP_014628957.1;transl_table=11 NZ_AP024926.1 RefSeq gene 193085 193969 . + . ID=gene-LDO09_RS01095;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LDO09_RS01095;old_locus_tag=TthAA11_02110 NZ_AP024926.1 Protein Homology CDS 193085 193969 . + 0 ID=cds-WP_049793113.1;Parent=gene-LDO09_RS01095;Dbxref=Genbank:WP_049793113.1;Name=WP_049793113.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227766.1;locus_tag=LDO09_RS01095;product=dihydropteroate synthase;protein_id=WP_049793113.1;transl_table=11 NZ_AP024926.1 RefSeq gene 193941 194297 . + . ID=gene-LDO09_RS01100;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=LDO09_RS01100;old_locus_tag=TthAA11_02120 NZ_AP024926.1 Protein Homology CDS 193941 194297 . + 0 ID=cds-WP_011227765.1;Parent=gene-LDO09_RS01100;Dbxref=Genbank:WP_011227765.1;Name=WP_011227765.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227765.1;locus_tag=LDO09_RS01100;product=dihydroneopterin aldolase;protein_id=WP_011227765.1;transl_table=11 NZ_AP024926.1 RefSeq gene 194473 195018 . + . ID=gene-LDO09_RS01105;Name=LDO09_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01105;old_locus_tag=TthAA11_02130 NZ_AP024926.1 Protein Homology CDS 194473 195018 . + 0 ID=cds-WP_011174153.1;Parent=gene-LDO09_RS01105;Dbxref=Genbank:WP_011174153.1;Name=WP_011174153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174153.1;locus_tag=LDO09_RS01105;product=NYN domain-containing protein;protein_id=WP_011174153.1;transl_table=11 NZ_AP024926.1 RefSeq gene 195104 195517 . - . ID=gene-LDO09_RS01110;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LDO09_RS01110;old_locus_tag=TthAA11_02140 NZ_AP024926.1 Protein Homology CDS 195104 195517 . - 0 ID=cds-WP_143584394.1;Parent=gene-LDO09_RS01110;Dbxref=Genbank:WP_143584394.1;Name=WP_143584394.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015715951.1;locus_tag=LDO09_RS01110;product=nucleoside-diphosphate kinase;protein_id=WP_143584394.1;transl_table=11 NZ_AP024926.1 RefSeq gene 195554 196489 . - . ID=gene-LDO09_RS01115;Name=LDO09_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01115;old_locus_tag=TthAA11_02150 NZ_AP024926.1 Protein Homology CDS 195554 196489 . - 0 ID=cds-WP_024118880.1;Parent=gene-LDO09_RS01115;Dbxref=Genbank:WP_024118880.1;Name=WP_024118880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630806.1;locus_tag=LDO09_RS01115;product=protein phosphatase 2C domain-containing protein;protein_id=WP_024118880.1;transl_table=11 NZ_AP024926.1 RefSeq gene 196499 197356 . - . ID=gene-LDO09_RS01120;Name=LDO09_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01120;old_locus_tag=TthAA11_02160 NZ_AP024926.1 Protein Homology CDS 196499 197356 . - 0 ID=cds-WP_143584397.1;Parent=gene-LDO09_RS01120;Dbxref=Genbank:WP_143584397.1;Name=WP_143584397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174156.1;locus_tag=LDO09_RS01120;product=LysR family transcriptional regulator;protein_id=WP_143584397.1;transl_table=11 NZ_AP024926.1 RefSeq gene 197463 200180 . + . ID=gene-LDO09_RS01125;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LDO09_RS01125;old_locus_tag=TthAA11_02170 NZ_AP024926.1 Protein Homology CDS 197463 200180 . + 0 ID=cds-WP_143584400.1;Parent=gene-LDO09_RS01125;Dbxref=Genbank:WP_143584400.1;Name=WP_143584400.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227763.1;locus_tag=LDO09_RS01125;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_143584400.1;transl_table=11 NZ_AP024926.1 RefSeq gene 200190 201452 . + . ID=gene-LDO09_RS01130;Name=LDO09_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01130;old_locus_tag=TthAA11_02180 NZ_AP024926.1 Protein Homology CDS 200190 201452 . + 0 ID=cds-WP_143584403.1;Parent=gene-LDO09_RS01130;Dbxref=Genbank:WP_143584403.1;Name=WP_143584403.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509800.1;locus_tag=LDO09_RS01130;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_143584403.1;transl_table=11 NZ_AP024926.1 RefSeq gene 201444 202007 . - . ID=gene-LDO09_RS01135;Name=LDO09_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01135;old_locus_tag=TthAA11_02190 NZ_AP024926.1 Protein Homology CDS 201444 202007 . - 0 ID=cds-WP_014628962.1;Parent=gene-LDO09_RS01135;Dbxref=Genbank:WP_014628962.1;Name=WP_014628962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628962.1;locus_tag=LDO09_RS01135;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_014628962.1;transl_table=11 NZ_AP024926.1 RefSeq gene 202004 202141 . - . ID=gene-LDO09_RS01140;Name=LDO09_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01140;old_locus_tag=TthAA11_02200 NZ_AP024926.1 Protein Homology CDS 202004 202141 . - 0 ID=cds-WP_014628961.1;Parent=gene-LDO09_RS01140;Dbxref=Genbank:WP_014628961.1;Name=WP_014628961.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: protein motif:HMM:NF014643.2;locus_tag=LDO09_RS01140;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=WP_014628961.1;transl_table=11 NZ_AP024926.1 RefSeq gene 202194 207128 . + . ID=gene-LDO09_RS01145;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LDO09_RS01145;old_locus_tag=TthAA11_02210 NZ_AP024926.1 Protein Homology CDS 202194 207128 . + 0 ID=cds-WP_223965875.1;Parent=gene-LDO09_RS01145;Dbxref=Genbank:WP_223965875.1;Name=WP_223965875.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630820.1;locus_tag=LDO09_RS01145;product=DNA polymerase III subunit alpha;protein_id=WP_223965875.1;transl_table=11 NZ_AP024926.1 RefSeq gene 207139 207837 . + . ID=gene-LDO09_RS01150;Name=LDO09_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01150;old_locus_tag=TthAA11_02220 NZ_AP024926.1 Protein Homology CDS 207139 207837 . + 0 ID=cds-WP_223965876.1;Parent=gene-LDO09_RS01150;Dbxref=Genbank:WP_223965876.1;Name=WP_223965876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630821.1;locus_tag=LDO09_RS01150;product=NTP transferase domain-containing protein;protein_id=WP_223965876.1;transl_table=11 NZ_AP024926.1 RefSeq gene 207842 208381 . + . ID=gene-LDO09_RS01155;Name=LDO09_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01155;old_locus_tag=TthAA11_02230 NZ_AP024926.1 Protein Homology CDS 207842 208381 . + 0 ID=cds-WP_143584412.1;Parent=gene-LDO09_RS01155;Dbxref=Genbank:WP_143584412.1;Name=WP_143584412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630823.1;locus_tag=LDO09_RS01155;product=hypothetical protein;protein_id=WP_143584412.1;transl_table=11 NZ_AP024926.1 RefSeq gene 208442 208681 . + . ID=gene-LDO09_RS01160;Name=LDO09_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01160;old_locus_tag=TthAA11_02240 NZ_AP024926.1 Protein Homology CDS 208442 208681 . + 0 ID=cds-WP_008630832.1;Parent=gene-LDO09_RS01160;Dbxref=Genbank:WP_008630832.1;Name=WP_008630832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013703184.1;locus_tag=LDO09_RS01160;product=ferredoxin family protein;protein_id=WP_008630832.1;transl_table=11 NZ_AP024926.1 RefSeq gene 208802 209275 . - . ID=gene-LDO09_RS01165;Name=LDO09_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01165;old_locus_tag=TthAA11_02250 NZ_AP024926.1 Protein Homology CDS 208802 209275 . - 0 ID=cds-WP_014628972.1;Parent=gene-LDO09_RS01165;Dbxref=Genbank:WP_014628972.1;Name=WP_014628972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174165.1;locus_tag=LDO09_RS01165;product=GNAT family N-acetyltransferase;protein_id=WP_014628972.1;transl_table=11 NZ_AP024926.1 RefSeq gene 209349 209570 . - . ID=gene-LDO09_RS01170;Name=LDO09_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01170;old_locus_tag=TthAA11_02260 NZ_AP024926.1 Protein Homology CDS 209349 209570 . - 0 ID=cds-WP_011227757.1;Parent=gene-LDO09_RS01170;Dbxref=Genbank:WP_011227757.1;Name=WP_011227757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516375.1;locus_tag=LDO09_RS01170;product=cold-shock protein;protein_id=WP_011227757.1;transl_table=11 NZ_AP024926.1 RefSeq gene 209686 210738 . - . ID=gene-LDO09_RS01175;Name=LDO09_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01175;old_locus_tag=TthAA11_02270 NZ_AP024926.1 Protein Homology CDS 209686 210738 . - 0 ID=cds-WP_143584415.1;Parent=gene-LDO09_RS01175;Dbxref=Genbank:WP_143584415.1;Name=WP_143584415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227756.1;locus_tag=LDO09_RS01175;product=J domain-containing protein;protein_id=WP_143584415.1;transl_table=11 NZ_AP024926.1 RefSeq gene 210886 211947 . + . ID=gene-LDO09_RS01180;Name=LDO09_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01180;old_locus_tag=TthAA11_02280 NZ_AP024926.1 Protein Homology CDS 210886 211947 . + 0 ID=cds-WP_011227755.1;Parent=gene-LDO09_RS01180;Dbxref=Genbank:WP_011227755.1;Name=WP_011227755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330247.1;locus_tag=LDO09_RS01180;product=alanine--glyoxylate aminotransferase family protein;protein_id=WP_011227755.1;transl_table=11 NZ_AP024926.1 RefSeq gene 211939 212724 . - . ID=gene-LDO09_RS01185;Name=uppP;gbkey=Gene;gene=uppP;gene_biotype=protein_coding;locus_tag=LDO09_RS01185;old_locus_tag=TthAA11_02290 NZ_AP024926.1 Protein Homology CDS 211939 212724 . - 0 ID=cds-WP_008630843.1;Parent=gene-LDO09_RS01185;Dbxref=Genbank:WP_008630843.1;Name=WP_008630843.1;Ontology_term=GO:0009252,GO:0046677,GO:0050380,GO:0030288;gbkey=CDS;gene=uppP;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227754.1;locus_tag=LDO09_RS01185;product=undecaprenyl-diphosphatase UppP;protein_id=WP_008630843.1;transl_table=11 NZ_AP024926.1 RefSeq gene 212739 213380 . + . ID=gene-LDO09_RS01190;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=LDO09_RS01190;old_locus_tag=TthAA11_02300 NZ_AP024926.1 Protein Homology CDS 212739 213380 . + 0 ID=cds-WP_143584418.1;Parent=gene-LDO09_RS01190;Dbxref=Genbank:WP_143584418.1;Name=WP_143584418.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630846.1;locus_tag=LDO09_RS01190;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_143584418.1;transl_table=11 NZ_AP024926.1 RefSeq gene 213368 214195 . + . ID=gene-LDO09_RS01195;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=LDO09_RS01195;old_locus_tag=TthAA11_02310 NZ_AP024926.1 Protein Homology CDS 213368 214195 . + 0 ID=cds-WP_014628977.1;Parent=gene-LDO09_RS01195;Dbxref=Genbank:WP_014628977.1;Name=WP_014628977.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630847.1;locus_tag=LDO09_RS01195;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_014628977.1;transl_table=11 NZ_AP024926.1 RefSeq gene 214173 214739 . + . ID=gene-LDO09_RS01200;Name=LDO09_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01200;old_locus_tag=TthAA11_02320 NZ_AP024926.1 Protein Homology CDS 214173 214739 . + 0 ID=cds-WP_223968835.1;Parent=gene-LDO09_RS01200;Dbxref=Genbank:WP_223968835.1;Name=WP_223968835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174172.1;locus_tag=LDO09_RS01200;product=hypothetical protein;protein_id=WP_223968835.1;transl_table=11 NZ_AP024926.1 RefSeq gene 214914 215408 . - . ID=gene-LDO09_RS01205;Name=LDO09_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01205;old_locus_tag=TthAA11_02330 NZ_AP024926.1 Protein Homology CDS 214914 215408 . - 0 ID=cds-WP_011174173.1;Parent=gene-LDO09_RS01205;Dbxref=Genbank:WP_011174173.1;Name=WP_011174173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716260.1;locus_tag=LDO09_RS01205;product=transcriptional regulator;protein_id=WP_011174173.1;transl_table=11 NZ_AP024926.1 RefSeq gene 215405 215974 . - . ID=gene-LDO09_RS01210;Name=sbtR;gbkey=Gene;gene=sbtR;gene_biotype=protein_coding;locus_tag=LDO09_RS01210;old_locus_tag=TthAA11_02340 NZ_AP024926.1 Protein Homology CDS 215405 215974 . - 0 ID=cds-WP_011174174.1;Parent=gene-LDO09_RS01210;Dbxref=Genbank:WP_011174174.1;Name=WP_011174174.1;gbkey=CDS;gene=sbtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174174.1;locus_tag=LDO09_RS01210;product=TetR/AcrR family transcriptional regulator SbtR;protein_id=WP_011174174.1;transl_table=11 NZ_AP024926.1 RefSeq gene 216051 216764 . + . ID=gene-LDO09_RS01215;Name=LDO09_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01215;old_locus_tag=TthAA11_02350 NZ_AP024926.1 Protein Homology CDS 216051 216764 . + 0 ID=cds-WP_014628980.1;Parent=gene-LDO09_RS01215;Dbxref=Genbank:WP_014628980.1;Name=WP_014628980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516365.1;locus_tag=LDO09_RS01215;product=cyanophycinase;protein_id=WP_014628980.1;transl_table=11 NZ_AP024926.1 RefSeq gene 216772 217254 . + . ID=gene-LDO09_RS01220;Name=LDO09_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01220;old_locus_tag=TthAA11_02360 NZ_AP024926.1 Protein Homology CDS 216772 217254 . + 0 ID=cds-WP_008630856.1;Parent=gene-LDO09_RS01220;Dbxref=Genbank:WP_008630856.1;Name=WP_008630856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630856.1;locus_tag=LDO09_RS01220;product=DUF2227 family putative metal-binding protein;protein_id=WP_008630856.1;transl_table=11 NZ_AP024926.1 RefSeq gene 217298 217783 . + . ID=gene-LDO09_RS01225;Name=LDO09_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01225;old_locus_tag=TthAA11_02370 NZ_AP024926.1 Protein Homology CDS 217298 217783 . + 0 ID=cds-WP_223968837.1;Parent=gene-LDO09_RS01225;Dbxref=Genbank:WP_223968837.1;Name=WP_223968837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628981.1;locus_tag=LDO09_RS01225;product=TlpA disulfide reductase family protein;protein_id=WP_223968837.1;transl_table=11 NZ_AP024926.1 RefSeq gene 217745 218182 . - . ID=gene-LDO09_RS01230;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LDO09_RS01230;old_locus_tag=TthAA11_02380 NZ_AP024926.1 Protein Homology CDS 217745 218182 . - 0 ID=cds-WP_014628982.1;Parent=gene-LDO09_RS01230;Dbxref=Genbank:WP_014628982.1;Name=WP_014628982.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628982.1;locus_tag=LDO09_RS01230;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_014628982.1;transl_table=11 NZ_AP024926.1 RefSeq gene 218214 218300 . - . ID=gene-LDO09_RS01235;Name=LDO09_RS01235;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS01235;old_locus_tag=TthAA11_t00120 NZ_AP024926.1 tRNAscan-SE tRNA 218214 218300 . - . ID=rna-LDO09_RS01235;Parent=gene-LDO09_RS01235;anticodon=(pos:complement(218264..218266));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS01235;product=tRNA-Leu NZ_AP024926.1 tRNAscan-SE exon 218214 218300 . - . ID=exon-LDO09_RS01235-1;Parent=rna-LDO09_RS01235;anticodon=(pos:complement(218264..218266));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS01235;product=tRNA-Leu NZ_AP024926.1 RefSeq gene 218522 220132 . + . ID=gene-LDO09_RS01240;Name=LDO09_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01240;old_locus_tag=TthAA11_02390 NZ_AP024926.1 Protein Homology CDS 218522 220132 . + 0 ID=cds-WP_223968838.1;Parent=gene-LDO09_RS01240;Dbxref=Genbank:WP_223968838.1;Name=WP_223968838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227748.1;locus_tag=LDO09_RS01240;product=30S ribosomal protein S1;protein_id=WP_223968838.1;transl_table=11 NZ_AP024926.1 RefSeq gene 220304 222940 . + . ID=gene-LDO09_RS01245;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LDO09_RS01245;old_locus_tag=TthAA11_02400 NZ_AP024926.1 Protein Homology CDS 220304 222940 . + 0 ID=cds-WP_143584433.1;Parent=gene-LDO09_RS01245;Dbxref=Genbank:WP_143584433.1;Name=WP_143584433.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174180.1;locus_tag=LDO09_RS01245;product=leucine--tRNA ligase;protein_id=WP_143584433.1;transl_table=11 NZ_AP024926.1 RefSeq gene 222918 223619 . - . ID=gene-LDO09_RS01250;Name=LDO09_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01250;old_locus_tag=TthAA11_02410 NZ_AP024926.1 Protein Homology CDS 222918 223619 . - 0 ID=cds-WP_143584435.1;Parent=gene-LDO09_RS01250;Dbxref=Genbank:WP_143584435.1;Name=WP_143584435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174181.1;locus_tag=LDO09_RS01250;product=Clp1/GlmU family protein;protein_id=WP_143584435.1;transl_table=11 NZ_AP024926.1 RefSeq gene 223703 224356 . - . ID=gene-LDO09_RS01255;Name=LDO09_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01255;old_locus_tag=TthAA11_02420 NZ_AP024926.1 Protein Homology CDS 223703 224356 . - 0 ID=cds-WP_143584436.1;Parent=gene-LDO09_RS01255;Dbxref=Genbank:WP_143584436.1;Name=WP_143584436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630865.1;locus_tag=LDO09_RS01255;product=hypothetical protein;protein_id=WP_143584436.1;transl_table=11 NZ_AP024926.1 RefSeq gene 224375 227305 . - . ID=gene-LDO09_RS01260;Name=LDO09_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01260;old_locus_tag=TthAA11_02430 NZ_AP024926.1 Protein Homology CDS 224375 227305 . - 0 ID=cds-WP_223968839.1;Parent=gene-LDO09_RS01260;Dbxref=Genbank:WP_223968839.1;Name=WP_223968839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630268.1;locus_tag=LDO09_RS01260;product=amylopullulanase;protein_id=WP_223968839.1;transl_table=11 NZ_AP024926.1 RefSeq gene 227389 228438 . + . ID=gene-LDO09_RS01265;Name=LDO09_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01265;old_locus_tag=TthAA11_02440 NZ_AP024926.1 Protein Homology CDS 227389 228438 . + 0 ID=cds-WP_014630267.1;Parent=gene-LDO09_RS01265;Dbxref=Genbank:WP_014630267.1;Name=WP_014630267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630267.1;locus_tag=LDO09_RS01265;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_014630267.1;transl_table=11 NZ_AP024926.1 RefSeq gene 228514 228810 . - . ID=gene-LDO09_RS01270;Name=LDO09_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01270;old_locus_tag=TthAA11_02450 NZ_AP024926.1 Protein Homology CDS 228514 228810 . - 0 ID=cds-WP_143584442.1;Parent=gene-LDO09_RS01270;Dbxref=Genbank:WP_143584442.1;Name=WP_143584442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174185.1;locus_tag=LDO09_RS01270;product=transcriptional regulator;protein_id=WP_143584442.1;transl_table=11 NZ_AP024926.1 RefSeq gene 228786 229337 . - . ID=gene-LDO09_RS01275;Name=LDO09_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01275;old_locus_tag=TthAA11_02460 NZ_AP024926.1 Protein Homology CDS 228786 229337 . - 0 ID=cds-WP_143584446.1;Parent=gene-LDO09_RS01275;Dbxref=Genbank:WP_143584446.1;Name=WP_143584446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630266.1;locus_tag=LDO09_RS01275;product=hypothetical protein;protein_id=WP_143584446.1;transl_table=11 NZ_AP024926.1 RefSeq gene 229334 229750 . - . ID=gene-LDO09_RS01280;Name=LDO09_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01280;old_locus_tag=TthAA11_02470 NZ_AP024926.1 Protein Homology CDS 229334 229750 . - 0 ID=cds-WP_223968840.1;Parent=gene-LDO09_RS01280;Dbxref=Genbank:WP_223968840.1;Name=WP_223968840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630265.1;locus_tag=LDO09_RS01280;product=hypothetical protein;protein_id=WP_223968840.1;transl_table=11 NZ_AP024926.1 RefSeq gene 229841 230800 . + . ID=gene-LDO09_RS01285;Name=LDO09_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01285;old_locus_tag=TthAA11_02480 NZ_AP024926.1 Protein Homology CDS 229841 230800 . + 0 ID=cds-WP_014509809.1;Parent=gene-LDO09_RS01285;Dbxref=Genbank:WP_014509809.1;Name=WP_014509809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509809.1;locus_tag=LDO09_RS01285;product=quinone oxidoreductase;protein_id=WP_014509809.1;transl_table=11 NZ_AP024926.1 RefSeq gene 230925 232751 . + . ID=gene-LDO09_RS01290;Name=LDO09_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01290;old_locus_tag=TthAA11_02490 NZ_AP024926.1 Protein Homology CDS 230925 232751 . + 0 ID=cds-WP_143584455.1;Parent=gene-LDO09_RS01290;Dbxref=Genbank:WP_143584455.1;Name=WP_143584455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509810.1;locus_tag=LDO09_RS01290;product=aldehyde ferredoxin oxidoreductase family protein;protein_id=WP_143584455.1;transl_table=11 NZ_AP024926.1 RefSeq gene 232809 233318 . + . ID=gene-LDO09_RS01295;Name=LDO09_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01295;old_locus_tag=TthAA11_02500 NZ_AP024926.1 Protein Homology CDS 232809 233318 . + 0 ID=cds-WP_014509811.1;Parent=gene-LDO09_RS01295;Dbxref=Genbank:WP_014509811.1;Name=WP_014509811.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509811.1;locus_tag=LDO09_RS01295;product=MoaD family protein;protein_id=WP_014509811.1;transl_table=11 NZ_AP024926.1 RefSeq gene 233430 233825 . + . ID=gene-LDO09_RS01300;Name=LDO09_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01300;old_locus_tag=TthAA11_02510 NZ_AP024926.1 Protein Homology CDS 233430 233825 . + 0 ID=cds-WP_143584458.1;Parent=gene-LDO09_RS01300;Dbxref=Genbank:WP_143584458.1;Name=WP_143584458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014514816.1;locus_tag=LDO09_RS01300;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_143584458.1;transl_table=11 NZ_AP024926.1 RefSeq gene 233825 235264 . + . ID=gene-LDO09_RS01305;Name=LDO09_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01305;old_locus_tag=TthAA11_02520 NZ_AP024926.1 Protein Homology CDS 233825 235264 . + 0 ID=cds-WP_143584461.1;Parent=gene-LDO09_RS01305;Dbxref=Genbank:WP_143584461.1;Name=WP_143584461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630260.1;locus_tag=LDO09_RS01305;product=O-antigen ligase family protein;protein_id=WP_143584461.1;transl_table=11 NZ_AP024926.1 RefSeq gene 235249 235677 . + . ID=gene-LDO09_RS01310;Name=LDO09_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01310;old_locus_tag=TthAA11_02530 NZ_AP024926.1 Protein Homology CDS 235249 235677 . + 0 ID=cds-WP_014630259.1;Parent=gene-LDO09_RS01310;Dbxref=Genbank:WP_014630259.1;Name=WP_014630259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174193.1;locus_tag=LDO09_RS01310;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_014630259.1;transl_table=11 NZ_AP024926.1 RefSeq gene 235687 236079 . + . ID=gene-LDO09_RS01315;Name=LDO09_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01315;old_locus_tag=TthAA11_02540 NZ_AP024926.1 Protein Homology CDS 235687 236079 . + 0 ID=cds-WP_143584466.1;Parent=gene-LDO09_RS01315;Dbxref=Genbank:WP_143584466.1;Name=WP_143584466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630258.1;locus_tag=LDO09_RS01315;product=hypothetical protein;protein_id=WP_143584466.1;transl_table=11 NZ_AP024926.1 RefSeq gene 236076 236426 . + . ID=gene-LDO09_RS01320;Name=LDO09_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01320;old_locus_tag=TthAA11_02550 NZ_AP024926.1 Protein Homology CDS 236076 236426 . + 0 ID=cds-WP_143584469.1;Parent=gene-LDO09_RS01320;Dbxref=Genbank:WP_143584469.1;Name=WP_143584469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630257.1;locus_tag=LDO09_RS01320;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_143584469.1;transl_table=11 NZ_AP024926.1 RefSeq gene 236423 237253 . + . ID=gene-LDO09_RS01325;Name=LDO09_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01325;old_locus_tag=TthAA11_02560 NZ_AP024926.1 Protein Homology CDS 236423 237253 . + 0 ID=cds-WP_143584471.1;Parent=gene-LDO09_RS01325;Dbxref=Genbank:WP_143584471.1;Name=WP_143584471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630256.1;locus_tag=LDO09_RS01325;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_143584471.1;transl_table=11 NZ_AP024926.1 RefSeq gene 237293 238480 . + . ID=gene-LDO09_RS01330;Name=LDO09_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01330;old_locus_tag=TthAA11_02570 NZ_AP024926.1 Protein Homology CDS 237293 238480 . + 0 ID=cds-WP_143584473.1;Parent=gene-LDO09_RS01330;Dbxref=Genbank:WP_143584473.1;Name=WP_143584473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174198.1;locus_tag=LDO09_RS01330;product=hypothetical protein;protein_id=WP_143584473.1;transl_table=11 NZ_AP024926.1 RefSeq gene 238458 240104 . + . ID=gene-LDO09_RS01335;Name=LDO09_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01335;old_locus_tag=TthAA11_02580 NZ_AP024926.1 Protein Homology CDS 238458 240104 . + 0 ID=cds-WP_143584475.1;Parent=gene-LDO09_RS01335;Dbxref=Genbank:WP_143584475.1;Name=WP_143584475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174199.1;locus_tag=LDO09_RS01335;product=GspE/PulE family protein;protein_id=WP_143584475.1;transl_table=11 NZ_AP024926.1 RefSeq gene 240108 241298 . + . ID=gene-LDO09_RS01340;Name=LDO09_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01340;old_locus_tag=TthAA11_02590 NZ_AP024926.1 Protein Homology CDS 240108 241298 . + 0 ID=cds-WP_124105080.1;Parent=gene-LDO09_RS01340;Dbxref=Genbank:WP_124105080.1;Name=WP_124105080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174200.1;locus_tag=LDO09_RS01340;product=type II secretion system F family protein;protein_id=WP_124105080.1;transl_table=11 NZ_AP024926.1 RefSeq gene 241295 241762 . + . ID=gene-LDO09_RS01345;Name=LDO09_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01345;old_locus_tag=TthAA11_02600 NZ_AP024926.1 Protein Homology CDS 241295 241762 . + 0 ID=cds-WP_014630252.1;Parent=gene-LDO09_RS01345;Dbxref=Genbank:WP_014630252.1;Name=WP_014630252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630252.1;locus_tag=LDO09_RS01345;product=hypothetical protein;protein_id=WP_014630252.1;transl_table=11 NZ_AP024926.1 RefSeq gene 241730 242461 . - . ID=gene-LDO09_RS01350;Name=LDO09_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01350;old_locus_tag=TthAA11_02610 NZ_AP024926.1 Protein Homology CDS 241730 242461 . - 0 ID=cds-WP_143584478.1;Parent=gene-LDO09_RS01350;Dbxref=Genbank:WP_143584478.1;Name=WP_143584478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174202.1;locus_tag=LDO09_RS01350;product=pseudouridine synthase;protein_id=WP_143584478.1;transl_table=11 NZ_AP024926.1 RefSeq gene 242458 242628 . - . ID=gene-LDO09_RS01355;Name=LDO09_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01355;old_locus_tag=TthAA11_02620 NZ_AP024926.1 Protein Homology CDS 242458 242628 . - 0 ID=cds-WP_167345972.1;Parent=gene-LDO09_RS01355;Dbxref=Genbank:WP_167345972.1;Name=WP_167345972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003047532.1;locus_tag=LDO09_RS01355;product=hypothetical protein;protein_id=WP_167345972.1;transl_table=11 NZ_AP024926.1 RefSeq gene 242715 243842 . + . ID=gene-LDO09_RS01360;Name=LDO09_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01360;old_locus_tag=TthAA11_02630 NZ_AP024926.1 Protein Homology CDS 242715 243842 . + 0 ID=cds-WP_143584480.1;Parent=gene-LDO09_RS01360;Dbxref=Genbank:WP_143584480.1;Name=WP_143584480.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA,ATP binding|0005524||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630880.1;locus_tag=LDO09_RS01360;product=alanine--tRNA ligase-related protein;protein_id=WP_143584480.1;transl_table=11 NZ_AP024926.1 RefSeq gene 243923 244594 . + . ID=gene-LDO09_RS01365;Name=LDO09_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01365;old_locus_tag=TthAA11_02640 NZ_AP024926.1 Protein Homology CDS 243923 244594 . + 0 ID=cds-WP_143584483.1;Parent=gene-LDO09_RS01365;Dbxref=Genbank:WP_143584483.1;Name=WP_143584483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174204.1;locus_tag=LDO09_RS01365;product=response regulator transcription factor;protein_id=WP_143584483.1;transl_table=11 NZ_AP024926.1 RefSeq gene 244591 245484 . + . ID=gene-LDO09_RS01370;Name=LDO09_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01370;old_locus_tag=TthAA11_02650 NZ_AP024926.1 Protein Homology CDS 244591 245484 . + 0 ID=cds-WP_143584487.1;Parent=gene-LDO09_RS01370;Dbxref=Genbank:WP_143584487.1;Name=WP_143584487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227733.1;locus_tag=LDO09_RS01370;product=ATP-binding protein;protein_id=WP_143584487.1;transl_table=11 NZ_AP024926.1 RefSeq gene 245499 246161 . + . ID=gene-LDO09_RS01375;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LDO09_RS01375;old_locus_tag=TthAA11_02660 NZ_AP024926.1 Protein Homology CDS 245499 246161 . + 0 ID=cds-WP_143584490.1;Parent=gene-LDO09_RS01375;Dbxref=Genbank:WP_143584490.1;Name=WP_143584490.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630890.1;locus_tag=LDO09_RS01375;product=phosphate signaling complex protein PhoU;protein_id=WP_143584490.1;transl_table=11 NZ_AP024926.1 RefSeq gene 246166 247264 . - . ID=gene-LDO09_RS01380;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LDO09_RS01380;old_locus_tag=TthAA11_02670 NZ_AP024926.1 Protein Homology CDS 247214 247264 . - 0 ID=cds-WP_143584493.1;Parent=gene-LDO09_RS01380;Dbxref=Genbank:WP_143584493.1;Name=WP_143584493.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509818.1;locus_tag=LDO09_RS01380;product=peptide chain release factor 2;protein_id=WP_143584493.1;transl_table=11 NZ_AP024926.1 Protein Homology CDS 246166 247212 . - 0 ID=cds-WP_143584493.1;Parent=gene-LDO09_RS01380;Dbxref=Genbank:WP_143584493.1;Name=WP_143584493.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509818.1;locus_tag=LDO09_RS01380;product=peptide chain release factor 2;protein_id=WP_143584493.1;transl_table=11 NZ_AP024926.1 RefSeq gene 247346 247789 . + . ID=gene-LDO09_RS01385;Name=LDO09_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01385;old_locus_tag=TthAA11_02680 NZ_AP024926.1 Protein Homology CDS 247346 247789 . + 0 ID=cds-WP_011174208.1;Parent=gene-LDO09_RS01385;Dbxref=Genbank:WP_011174208.1;Name=WP_011174208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509819.1;locus_tag=LDO09_RS01385;product=hypothetical protein;protein_id=WP_011174208.1;transl_table=11 NZ_AP024926.1 RefSeq gene 247832 249109 . - . ID=gene-LDO09_RS01390;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LDO09_RS01390;old_locus_tag=TthAA11_02690 NZ_AP024926.1 Protein Homology CDS 247832 249109 . - 0 ID=cds-WP_143584496.1;Parent=gene-LDO09_RS01390;Dbxref=Genbank:WP_143584496.1;Name=WP_143584496.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227732.1;locus_tag=LDO09_RS01390;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_143584496.1;transl_table=11 NZ_AP024926.1 RefSeq gene 249227 249460 . + . ID=gene-LDO09_RS01395;Name=LDO09_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01395;old_locus_tag=TthAA11_02700 NZ_AP024926.1 Protein Homology CDS 249227 249460 . + 0 ID=cds-WP_008630901.1;Parent=gene-LDO09_RS01395;Dbxref=Genbank:WP_008630901.1;Name=WP_008630901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630901.1;locus_tag=LDO09_RS01395;product=hypothetical protein;protein_id=WP_008630901.1;transl_table=11 NZ_AP024926.1 RefSeq gene 249470 251290 . + . ID=gene-LDO09_RS01400;Name=LDO09_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01400;old_locus_tag=TthAA11_02710 NZ_AP024926.1 Protein Homology CDS 249470 251290 . + 0 ID=cds-WP_143584499.1;Parent=gene-LDO09_RS01400;Dbxref=Genbank:WP_143584499.1;Name=WP_143584499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019549870.1;locus_tag=LDO09_RS01400;product=serine/threonine-protein kinase;protein_id=WP_143584499.1;transl_table=11 NZ_AP024926.1 RefSeq gene 251295 251669 . + . ID=gene-LDO09_RS01405;Name=LDO09_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01405;old_locus_tag=TthAA11_02720 NZ_AP024926.1 Protein Homology CDS 251295 251669 . + 0 ID=cds-WP_014630244.1;Parent=gene-LDO09_RS01405;Dbxref=Genbank:WP_014630244.1;Name=WP_014630244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328507.1;locus_tag=LDO09_RS01405;product=Rid family detoxifying hydrolase;protein_id=WP_014630244.1;transl_table=11 NZ_AP024926.1 RefSeq gene 251715 252662 . + . ID=gene-LDO09_RS01410;Name=meaB;gbkey=Gene;gene=meaB;gene_biotype=protein_coding;locus_tag=LDO09_RS01410;old_locus_tag=TthAA11_02730 NZ_AP024926.1 Protein Homology CDS 251715 252662 . + 0 ID=cds-WP_014630243.1;Parent=gene-LDO09_RS01410;Dbxref=Genbank:WP_014630243.1;Name=WP_014630243.1;Ontology_term=GO:0015819,GO:0015822,GO:1903826,GO:0016772;gbkey=CDS;gene=meaB;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=lysine transport|0015819||IEA,ornithine transport|0015822||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174213.1;locus_tag=LDO09_RS01410;product=methylmalonyl Co-A mutase-associated GTPase MeaB;protein_id=WP_014630243.1;transl_table=11 NZ_AP024926.1 RefSeq gene 252615 253079 . - . ID=gene-LDO09_RS01415;Name=LDO09_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01415;old_locus_tag=TthAA11_02740 NZ_AP024926.1 Protein Homology CDS 252615 253079 . - 0 ID=cds-WP_143584501.1;Parent=gene-LDO09_RS01415;Dbxref=Genbank:WP_143584501.1;Name=WP_143584501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630905.1;locus_tag=LDO09_RS01415;product=NUDIX hydrolase;protein_id=WP_143584501.1;transl_table=11 NZ_AP024926.1 RefSeq gene 253169 254687 . - . ID=gene-LDO09_RS01420;Name=LDO09_RS01420;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO09_RS01420;old_locus_tag=TthAA11_r00030 NZ_AP024926.1 cmsearch rRNA 253169 254687 . - . ID=rna-LDO09_RS01420;Parent=gene-LDO09_RS01420;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS01420;product=16S ribosomal RNA NZ_AP024926.1 cmsearch exon 253169 254687 . - . ID=exon-LDO09_RS01420-1;Parent=rna-LDO09_RS01420;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS01420;product=16S ribosomal RNA NZ_AP024926.1 RefSeq gene 255154 255843 . + . ID=gene-LDO09_RS01425;Name=LDO09_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01425;old_locus_tag=TthAA11_02760 NZ_AP024926.1 Protein Homology CDS 255154 255843 . + 0 ID=cds-WP_143584079.1-2;Parent=gene-LDO09_RS01425;Dbxref=Genbank:WP_143584079.1;Name=WP_143584079.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS01425;product=IS5-like element ISTth7 family transposase;protein_id=WP_143584079.1;transl_table=11 NZ_AP024926.1 RefSeq gene 255788 256291 . - . ID=gene-LDO09_RS01430;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LDO09_RS01430;old_locus_tag=TthAA11_02770 NZ_AP024926.1 Protein Homology CDS 255788 256291 . - 0 ID=cds-WP_143584504.1;Parent=gene-LDO09_RS01430;Dbxref=Genbank:WP_143584504.1;Name=WP_143584504.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110589.1;locus_tag=LDO09_RS01430;product=transcriptional regulator NrdR;protein_id=WP_143584504.1;transl_table=11 NZ_AP024926.1 RefSeq gene 256288 256995 . - . ID=gene-LDO09_RS01435;Name=LDO09_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01435;old_locus_tag=TthAA11_02780 NZ_AP024926.1 Protein Homology CDS 256288 256995 . - 0 ID=cds-WP_011174216.1;Parent=gene-LDO09_RS01435;Dbxref=Genbank:WP_011174216.1;Name=WP_011174216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174216.1;locus_tag=LDO09_RS01435;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_011174216.1;transl_table=11 NZ_AP024926.1 RefSeq gene 257025 257504 . + . ID=gene-LDO09_RS01440;Name=LDO09_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01440;old_locus_tag=TthAA11_02790 NZ_AP024926.1 Protein Homology CDS 257025 257504 . + 0 ID=cds-WP_143584507.1;Parent=gene-LDO09_RS01440;Dbxref=Genbank:WP_143584507.1;Name=WP_143584507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516247.1;locus_tag=LDO09_RS01440;product=macro domain-containing protein;protein_id=WP_143584507.1;transl_table=11 NZ_AP024926.1 RefSeq gene 257501 258385 . - . ID=gene-LDO09_RS01445;Name=LDO09_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01445;old_locus_tag=TthAA11_02800 NZ_AP024926.1 Protein Homology CDS 257501 258385 . - 0 ID=cds-WP_143584511.1;Parent=gene-LDO09_RS01445;Dbxref=Genbank:WP_143584511.1;Name=WP_143584511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227728.1;locus_tag=LDO09_RS01445;product=putative Ig domain-containing protein;protein_id=WP_143584511.1;transl_table=11 NZ_AP024926.1 RefSeq gene 258416 258961 . + . ID=gene-LDO09_RS01450;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LDO09_RS01450;old_locus_tag=TthAA11_02810 NZ_AP024926.1 Protein Homology CDS 258416 258961 . + 0 ID=cds-WP_014509824.1;Parent=gene-LDO09_RS01450;Dbxref=Genbank:WP_014509824.1;Name=WP_014509824.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630240.1;locus_tag=LDO09_RS01450;product=dCTP deaminase;protein_id=WP_014509824.1;transl_table=11 NZ_AP024926.1 RefSeq gene 258965 260044 . + . ID=gene-LDO09_RS01455;Name=LDO09_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01455;old_locus_tag=TthAA11_02820 NZ_AP024926.1 Protein Homology CDS 258965 260044 . + 0 ID=cds-WP_143584513.1;Parent=gene-LDO09_RS01455;Dbxref=Genbank:WP_143584513.1;Name=WP_143584513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328516.1;locus_tag=LDO09_RS01455;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_143584513.1;transl_table=11 NZ_AP024926.1 RefSeq gene 260041 260661 . + . ID=gene-LDO09_RS01460;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=LDO09_RS01460;old_locus_tag=TthAA11_02830 NZ_AP024926.1 Protein Homology CDS 260041 260661 . + 0 ID=cds-WP_060384772.1;Parent=gene-LDO09_RS01460;Dbxref=Genbank:WP_060384772.1;Name=WP_060384772.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174220.1;locus_tag=LDO09_RS01460;product=ATP phosphoribosyltransferase;protein_id=WP_060384772.1;transl_table=11 NZ_AP024926.1 RefSeq gene 260658 261242 . + . ID=gene-LDO09_RS01465;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=LDO09_RS01465;old_locus_tag=TthAA11_02840 NZ_AP024926.1 Protein Homology CDS 260658 261242 . + 0 ID=cds-WP_143584516.1;Parent=gene-LDO09_RS01465;Dbxref=Genbank:WP_143584516.1;Name=WP_143584516.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630237.1;locus_tag=LDO09_RS01465;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_143584516.1;transl_table=11 NZ_AP024926.1 RefSeq gene 261232 261471 . - . ID=gene-LDO09_RS01470;Name=LDO09_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01470;old_locus_tag=TthAA11_02850 NZ_AP024926.1 Protein Homology CDS 261232 261471 . - 0 ID=cds-WP_008630920.1;Parent=gene-LDO09_RS01470;Dbxref=Genbank:WP_008630920.1;Name=WP_008630920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630920.1;locus_tag=LDO09_RS01470;product=hypothetical protein;protein_id=WP_008630920.1;transl_table=11 NZ_AP024926.1 RefSeq gene 261473 261661 . - . ID=gene-LDO09_RS01475;Name=LDO09_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01475;old_locus_tag=TthAA11_02860 NZ_AP024926.1 Protein Homology CDS 261473 261661 . - 0 ID=cds-WP_038034982.1;Parent=gene-LDO09_RS01475;Dbxref=Genbank:WP_038034982.1;Name=WP_038034982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003049535.1;locus_tag=LDO09_RS01475;product=hypothetical protein;protein_id=WP_038034982.1;transl_table=11 NZ_AP024926.1 RefSeq gene 261651 262607 . - . ID=gene-LDO09_RS01480;Name=LDO09_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01480;old_locus_tag=TthAA11_02870 NZ_AP024926.1 Protein Homology CDS 261651 262607 . - 0 ID=cds-WP_143584518.1;Parent=gene-LDO09_RS01480;Dbxref=Genbank:WP_143584518.1;Name=WP_143584518.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630924.1;locus_tag=LDO09_RS01480;product=branched-chain amino acid transaminase;protein_id=WP_143584518.1;transl_table=11 NZ_AP024926.1 RefSeq gene 262594 263547 . - . ID=gene-LDO09_RS01485;Name=LDO09_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01485;old_locus_tag=TthAA11_02880 NZ_AP024926.1 Protein Homology CDS 262594 263547 . - 0 ID=cds-WP_143584522.1;Parent=gene-LDO09_RS01485;Dbxref=Genbank:WP_143584522.1;Name=WP_143584522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509828.1;locus_tag=LDO09_RS01485;product=hydrogen peroxide-inducible genes activator;protein_id=WP_143584522.1;transl_table=11 NZ_AP024926.1 RefSeq gene 263657 264565 . + . ID=gene-LDO09_RS01490;Name=LDO09_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01490;old_locus_tag=TthAA11_02890 NZ_AP024926.1 Protein Homology CDS 263657 264565 . + 0 ID=cds-WP_143584525.1;Parent=gene-LDO09_RS01490;Dbxref=Genbank:WP_143584525.1;Name=WP_143584525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013013236.1;locus_tag=LDO09_RS01490;product=manganese catalase family protein;protein_id=WP_143584525.1;transl_table=11 NZ_AP024926.1 RefSeq gene 264569 265573 . - . ID=gene-LDO09_RS01495;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LDO09_RS01495;old_locus_tag=TthAA11_02900 NZ_AP024926.1 Protein Homology CDS 264569 265573 . - 0 ID=cds-WP_143584529.1;Parent=gene-LDO09_RS01495;Dbxref=Genbank:WP_143584529.1;Name=WP_143584529.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630928.1;locus_tag=LDO09_RS01495;product=DNA-processing protein DprA;protein_id=WP_143584529.1;transl_table=11 NZ_AP024926.1 RefSeq gene 265658 266563 . + . ID=gene-LDO09_RS01500;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LDO09_RS01500;old_locus_tag=TthAA11_02910 NZ_AP024926.1 Protein Homology CDS 265658 266563 . + 0 ID=cds-WP_008630929.1;Parent=gene-LDO09_RS01500;Dbxref=Genbank:WP_008630929.1;Name=WP_008630929.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630929.1;locus_tag=LDO09_RS01500;product=GTPase Era;protein_id=WP_008630929.1;transl_table=11 NZ_AP024926.1 RefSeq gene 266608 267495 . + . ID=gene-LDO09_RS01505;Name=LDO09_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01505;old_locus_tag=TthAA11_02920 NZ_AP024926.1 Protein Homology CDS 266608 267495 . + 0 ID=cds-WP_143584533.1;Parent=gene-LDO09_RS01505;Dbxref=Genbank:WP_143584533.1;Name=WP_143584533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174227.1;locus_tag=LDO09_RS01505;product=acyltransferase;protein_id=WP_143584533.1;transl_table=11 NZ_AP024926.1 RefSeq gene 267537 267613 . + . ID=gene-LDO09_RS01510;Name=LDO09_RS01510;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS01510;old_locus_tag=TthAA11_t00130 NZ_AP024926.1 tRNAscan-SE tRNA 267537 267613 . + . ID=rna-LDO09_RS01510;Parent=gene-LDO09_RS01510;anticodon=(pos:267571..267573);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS01510;product=tRNA-Ile NZ_AP024926.1 tRNAscan-SE exon 267537 267613 . + . ID=exon-LDO09_RS01510-1;Parent=rna-LDO09_RS01510;anticodon=(pos:267571..267573);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS01510;product=tRNA-Ile NZ_AP024926.1 RefSeq gene 267691 268665 . + . ID=gene-LDO09_RS01515;Name=LDO09_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01515;old_locus_tag=TthAA11_02930 NZ_AP024926.1 Protein Homology CDS 267691 268665 . + 0 ID=cds-WP_143584535.1;Parent=gene-LDO09_RS01515;Dbxref=Genbank:WP_143584535.1;Name=WP_143584535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630996.1;locus_tag=LDO09_RS01515;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=WP_143584535.1;transl_table=11 NZ_AP024926.1 RefSeq gene 268643 269191 . - . ID=gene-LDO09_RS01520;Name=LDO09_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01520;old_locus_tag=TthAA11_02940 NZ_AP024926.1 Protein Homology CDS 268643 269191 . - 0 ID=cds-WP_143584538.1;Parent=gene-LDO09_RS01520;Dbxref=Genbank:WP_143584538.1;Name=WP_143584538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509831.1;locus_tag=LDO09_RS01520;product=Uma2 family endonuclease;protein_id=WP_143584538.1;transl_table=11 NZ_AP024926.1 RefSeq gene 269201 270421 . - . ID=gene-LDO09_RS01525;Name=LDO09_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01525;old_locus_tag=TthAA11_02950 NZ_AP024926.1 Protein Homology CDS 269201 270421 . - 0 ID=cds-WP_143584541.1;Parent=gene-LDO09_RS01525;Dbxref=Genbank:WP_143584541.1;Name=WP_143584541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717881.1;locus_tag=LDO09_RS01525;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_143584541.1;transl_table=11 NZ_AP024926.1 RefSeq gene 270474 272000 . - . ID=gene-LDO09_RS01530;Name=LDO09_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01530;old_locus_tag=TthAA11_02960 NZ_AP024926.1 Protein Homology CDS 270474 272000 . - 0 ID=cds-WP_143584544.1;Parent=gene-LDO09_RS01530;Dbxref=Genbank:WP_143584544.1;Name=WP_143584544.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717880.1;locus_tag=LDO09_RS01530;product=S8 family serine peptidase;protein_id=WP_143584544.1;transl_table=11 NZ_AP024926.1 RefSeq gene 272074 273507 . + . ID=gene-LDO09_RS01535;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=LDO09_RS01535;old_locus_tag=TthAA11_02970 NZ_AP024926.1 Protein Homology CDS 272074 273507 . + 0 ID=cds-WP_143584547.1;Parent=gene-LDO09_RS01535;Dbxref=Genbank:WP_143584547.1;Name=WP_143584547.1;Ontology_term=GO:0006433,GO:0004827;gbkey=CDS;gene=proS;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550976.1;locus_tag=LDO09_RS01535;product=proline--tRNA ligase;protein_id=WP_143584547.1;transl_table=11 NZ_AP024926.1 RefSeq gene 273577 275313 . + . ID=gene-LDO09_RS01540;Name=LDO09_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01540;old_locus_tag=TthAA11_02980 NZ_AP024926.1 Protein Homology CDS 273577 275313 . + 0 ID=cds-WP_172619151.1;Parent=gene-LDO09_RS01540;Dbxref=Genbank:WP_172619151.1;Name=WP_172619151.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174242.1;locus_tag=LDO09_RS01540;product=GNAT family N-acetyltransferase;protein_id=WP_172619151.1;transl_table=11 NZ_AP024926.1 RefSeq gene 275279 275644 . - . ID=gene-LDO09_RS01545;Name=LDO09_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01545;old_locus_tag=TthAA11_02990 NZ_AP024926.1 Protein Homology CDS 275279 275644 . - 0 ID=cds-WP_143584553.1;Parent=gene-LDO09_RS01545;Dbxref=Genbank:WP_143584553.1;Name=WP_143584553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509835.1;locus_tag=LDO09_RS01545;product=ASCH domain-containing protein;protein_id=WP_143584553.1;transl_table=11 NZ_AP024926.1 RefSeq gene 275659 276321 . + . ID=gene-LDO09_RS01550;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LDO09_RS01550;old_locus_tag=TthAA11_03000 NZ_AP024926.1 Protein Homology CDS 275659 276321 . + 0 ID=cds-WP_143584556.1;Parent=gene-LDO09_RS01550;Dbxref=Genbank:WP_143584556.1;Name=WP_143584556.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509836.1;locus_tag=LDO09_RS01550;product=endonuclease III;protein_id=WP_143584556.1;transl_table=11 NZ_AP024926.1 RefSeq gene 276339 277472 . + . ID=gene-LDO09_RS01555;Name=LDO09_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01555;old_locus_tag=TthAA11_03010 NZ_AP024926.1 Protein Homology CDS 276339 277472 . + 0 ID=cds-WP_143584559.1;Parent=gene-LDO09_RS01555;Dbxref=Genbank:WP_143584559.1;Name=WP_143584559.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509837.1;locus_tag=LDO09_RS01555;product=MFS transporter;protein_id=WP_143584559.1;transl_table=11 NZ_AP024926.1 RefSeq gene 277479 278690 . + . ID=gene-LDO09_RS01560;Name=LDO09_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01560;old_locus_tag=TthAA11_03020 NZ_AP024926.1 Protein Homology CDS 277479 278690 . + 0 ID=cds-WP_143584562.1;Parent=gene-LDO09_RS01560;Dbxref=Genbank:WP_143584562.1;Name=WP_143584562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174246.1;locus_tag=LDO09_RS01560;product=molybdopterin molybdotransferase MoeA;protein_id=WP_143584562.1;transl_table=11 NZ_AP024926.1 RefSeq gene 278762 280294 . + . ID=gene-LDO09_RS01565;Name=LDO09_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01565;old_locus_tag=TthAA11_03030 NZ_AP024926.1 Protein Homology CDS 278762 280294 . + 0 ID=cds-WP_172619152.1;Parent=gene-LDO09_RS01565;Dbxref=Genbank:WP_172619152.1;Name=WP_172619152.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630217.1;locus_tag=LDO09_RS01565;product=DEAD/DEAH box helicase;protein_id=WP_172619152.1;transl_table=11 NZ_AP024926.1 RefSeq gene 280337 280413 . - . ID=gene-LDO09_RS01570;Name=LDO09_RS01570;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS01570;old_locus_tag=TthAA11_t00140 NZ_AP024926.1 tRNAscan-SE tRNA 280337 280413 . - . ID=rna-LDO09_RS01570;Parent=gene-LDO09_RS01570;anticodon=(pos:complement(280377..280379));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS01570;product=tRNA-Arg NZ_AP024926.1 tRNAscan-SE exon 280337 280413 . - . ID=exon-LDO09_RS01570-1;Parent=rna-LDO09_RS01570;anticodon=(pos:complement(280377..280379));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS01570;product=tRNA-Arg NZ_AP024926.1 RefSeq gene 280513 282468 . + . ID=gene-LDO09_RS01575;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LDO09_RS01575;old_locus_tag=TthAA11_03040 NZ_AP024926.1 Protein Homology CDS 280513 282468 . + 0 ID=cds-WP_143584567.1;Parent=gene-LDO09_RS01575;Dbxref=Genbank:WP_143584567.1;Name=WP_143584567.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174248.1;locus_tag=LDO09_RS01575;product=transketolase;protein_id=WP_143584567.1;transl_table=11 NZ_AP024926.1 RefSeq gene 282523 282948 . + . ID=gene-LDO09_RS01580;Name=LDO09_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01580;old_locus_tag=TthAA11_03050 NZ_AP024926.1 Protein Homology CDS 282523 282948 . + 0 ID=cds-WP_011174249.1;Parent=gene-LDO09_RS01580;Dbxref=Genbank:WP_011174249.1;Name=WP_011174249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227714.1;locus_tag=LDO09_RS01580;product=phosphate-starvation-inducible PsiE family protein;protein_id=WP_011174249.1;transl_table=11 NZ_AP024926.1 RefSeq gene 282948 283610 . + . ID=gene-LDO09_RS01585;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LDO09_RS01585;old_locus_tag=TthAA11_03060 NZ_AP024926.1 Protein Homology CDS 282948 283610 . + 0 ID=cds-WP_143584569.1;Parent=gene-LDO09_RS01585;Dbxref=Genbank:WP_143584569.1;Name=WP_143584569.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174250.1;locus_tag=LDO09_RS01585;product=ribulose-phosphate 3-epimerase;protein_id=WP_143584569.1;transl_table=11 NZ_AP024926.1 RefSeq gene 283702 283932 . - . ID=gene-LDO09_RS01590;Name=LDO09_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01590;old_locus_tag=TthAA11_03080 NZ_AP024926.1 GeneMarkS-2+ CDS 283702 283932 . - 0 ID=cds-WP_223965902.1;Parent=gene-LDO09_RS01590;Dbxref=Genbank:WP_223965902.1;Name=WP_223965902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS01590;product=hypothetical protein;protein_id=WP_223965902.1;transl_table=11 NZ_AP024926.1 RefSeq gene 283981 284057 . - . ID=gene-LDO09_RS01595;Name=LDO09_RS01595;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS01595;old_locus_tag=TthAA11_t00150 NZ_AP024926.1 tRNAscan-SE tRNA 283981 284057 . - . ID=rna-LDO09_RS01595;Parent=gene-LDO09_RS01595;anticodon=(pos:complement(284021..284023));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS01595;product=tRNA-Pro NZ_AP024926.1 tRNAscan-SE exon 283981 284057 . - . ID=exon-LDO09_RS01595-1;Parent=rna-LDO09_RS01595;anticodon=(pos:complement(284021..284023));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS01595;product=tRNA-Pro NZ_AP024926.1 RefSeq gene 284113 284430 . + . ID=gene-LDO09_RS01600;Name=LDO09_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01600;old_locus_tag=TthAA11_03090 NZ_AP024926.1 Protein Homology CDS 284113 284430 . + 0 ID=cds-WP_011174252.1;Parent=gene-LDO09_RS01600;Dbxref=Genbank:WP_011174252.1;Name=WP_011174252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329927.1;locus_tag=LDO09_RS01600;product=cupin domain-containing protein;protein_id=WP_011174252.1;transl_table=11 NZ_AP024926.1 RefSeq gene 284496 285350 . + . ID=gene-LDO09_RS01605;Name=LDO09_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01605;old_locus_tag=TthAA11_03100 NZ_AP024926.1 Protein Homology CDS 284496 285350 . + 0 ID=cds-WP_143584572.1;Parent=gene-LDO09_RS01605;Dbxref=Genbank:WP_143584572.1;Name=WP_143584572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509842.1;locus_tag=LDO09_RS01605;product=nitronate monooxygenase;protein_id=WP_143584572.1;transl_table=11 NZ_AP024926.1 RefSeq gene 285351 285854 . + . ID=gene-LDO09_RS01610;Name=LDO09_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01610;old_locus_tag=TthAA11_03110 NZ_AP024926.1 Protein Homology CDS 285351 285854 . + 0 ID=cds-WP_011227712.1;Parent=gene-LDO09_RS01610;Dbxref=Genbank:WP_011227712.1;Name=WP_011227712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227712.1;locus_tag=LDO09_RS01610;product=hypothetical protein;protein_id=WP_011227712.1;transl_table=11 NZ_AP024926.1 RefSeq gene 285860 286477 . + . ID=gene-LDO09_RS01615;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=LDO09_RS01615;old_locus_tag=TthAA11_03120 NZ_AP024926.1 Protein Homology CDS 285860 286477 . + 0 ID=cds-WP_011227711.1;Parent=gene-LDO09_RS01615;Dbxref=Genbank:WP_011227711.1;Name=WP_011227711.1;gbkey=CDS;gene=fadR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227711.1;locus_tag=LDO09_RS01615;product=TetR family transcriptional regulator FadR;protein_id=WP_011227711.1;transl_table=11 NZ_AP024926.1 RefSeq gene 286446 287894 . - . ID=gene-LDO09_RS01620;Name=LDO09_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01620;old_locus_tag=TthAA11_03130 NZ_AP024926.1 Protein Homology CDS 286446 287894 . - 0 ID=cds-WP_011227710.1;Parent=gene-LDO09_RS01620;Dbxref=Genbank:WP_011227710.1;Name=WP_011227710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630212.1;locus_tag=LDO09_RS01620;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_011227710.1;transl_table=11 NZ_AP024926.1 RefSeq gene 287899 288945 . - . ID=gene-LDO09_RS01625;Name=LDO09_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01625;old_locus_tag=TthAA11_03140 NZ_AP024926.1 Protein Homology CDS 287899 288945 . - 0 ID=cds-WP_143584576.1;Parent=gene-LDO09_RS01625;Dbxref=Genbank:WP_143584576.1;Name=WP_143584576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631045.1;locus_tag=LDO09_RS01625;product=S1C family serine protease;protein_id=WP_143584576.1;transl_table=11 NZ_AP024926.1 RefSeq gene 288950 290728 . - . ID=gene-LDO09_RS01630;Name=LDO09_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01630;old_locus_tag=TthAA11_03150 NZ_AP024926.1 Protein Homology CDS 288950 290728 . - 0 ID=cds-WP_143584578.1;Parent=gene-LDO09_RS01630;Dbxref=Genbank:WP_143584578.1;Name=WP_143584578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174258.1;locus_tag=LDO09_RS01630;product=arginine--tRNA ligase;protein_id=WP_143584578.1;transl_table=11 NZ_AP024926.1 RefSeq gene 290741 292024 . - . ID=gene-LDO09_RS01635;Name=LDO09_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01635;old_locus_tag=TthAA11_03160 NZ_AP024926.1 Protein Homology CDS 290741 292024 . - 0 ID=cds-WP_143584580.1;Parent=gene-LDO09_RS01635;Dbxref=Genbank:WP_143584580.1;Name=WP_143584580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630209.1;locus_tag=LDO09_RS01635;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_143584580.1;transl_table=11 NZ_AP024926.1 RefSeq gene 292021 293430 . - . ID=gene-LDO09_RS01640;Name=LDO09_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01640;old_locus_tag=TthAA11_03170 NZ_AP024926.1 Protein Homology CDS 292021 293430 . - 0 ID=cds-WP_143584583.1;Parent=gene-LDO09_RS01640;Dbxref=Genbank:WP_143584583.1;Name=WP_143584583.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227706.1;locus_tag=LDO09_RS01640;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_143584583.1;transl_table=11 NZ_AP024926.1 RefSeq gene 293424 295244 . - . ID=gene-LDO09_RS01645;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LDO09_RS01645;old_locus_tag=TthAA11_03180 NZ_AP024926.1 Protein Homology CDS 293424 295244 . - 0 ID=cds-WP_143584585.1;Parent=gene-LDO09_RS01645;Dbxref=Genbank:WP_143584585.1;Name=WP_143584585.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227705.1;locus_tag=LDO09_RS01645;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_143584585.1;transl_table=11 NZ_AP024926.1 RefSeq gene 295247 295534 . - . ID=gene-LDO09_RS01650;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LDO09_RS01650;old_locus_tag=TthAA11_03190 NZ_AP024926.1 Protein Homology CDS 295247 295534 . - 0 ID=cds-WP_011227704.1;Parent=gene-LDO09_RS01650;Dbxref=Genbank:WP_011227704.1;Name=WP_011227704.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515153.1;locus_tag=LDO09_RS01650;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_011227704.1;transl_table=11 NZ_AP024926.1 RefSeq gene 295531 296061 . - . ID=gene-LDO09_RS01655;Name=LDO09_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01655;old_locus_tag=TthAA11_03200 NZ_AP024926.1 Protein Homology CDS 295531 296061 . - 0 ID=cds-WP_143584588.1;Parent=gene-LDO09_RS01655;Dbxref=Genbank:WP_143584588.1;Name=WP_143584588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716510.1;locus_tag=LDO09_RS01655;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_143584588.1;transl_table=11 NZ_AP024926.1 RefSeq gene 296058 296606 . - . ID=gene-LDO09_RS01660;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LDO09_RS01660;old_locus_tag=TthAA11_03210 NZ_AP024926.1 Protein Homology CDS 296058 296606 . - 0 ID=cds-WP_011174264.1;Parent=gene-LDO09_RS01660;Dbxref=Genbank:WP_011174264.1;Name=WP_011174264.1;Ontology_term=GO:0016651;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328962.1;locus_tag=LDO09_RS01660;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_011174264.1;transl_table=11 NZ_AP024926.1 RefSeq gene 296603 297700 . - . ID=gene-LDO09_RS01665;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LDO09_RS01665;old_locus_tag=TthAA11_03220 NZ_AP024926.1 Protein Homology CDS 296603 297700 . - 0 ID=cds-WP_143584590.1;Parent=gene-LDO09_RS01665;Dbxref=Genbank:WP_143584590.1;Name=WP_143584590.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227702.1;locus_tag=LDO09_RS01665;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_143584590.1;transl_table=11 NZ_AP024926.1 RefSeq gene 297697 300048 . - . ID=gene-LDO09_RS01670;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LDO09_RS01670;old_locus_tag=TthAA11_03230 NZ_AP024926.1 Protein Homology CDS 297697 300048 . - 0 ID=cds-WP_143584593.1;Parent=gene-LDO09_RS01670;Dbxref=Genbank:WP_143584593.1;Name=WP_143584593.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630203.1;locus_tag=LDO09_RS01670;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_143584593.1;transl_table=11 NZ_AP024926.1 RefSeq gene 300050 301366 . - . ID=gene-LDO09_RS01675;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LDO09_RS01675;old_locus_tag=TthAA11_03240 NZ_AP024926.1 Protein Homology CDS 300050 301366 . - 0 ID=cds-WP_143584595.1;Parent=gene-LDO09_RS01675;Dbxref=Genbank:WP_143584595.1;Name=WP_143584595.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227700.1;locus_tag=LDO09_RS01675;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_143584595.1;transl_table=11 NZ_AP024926.1 RefSeq gene 301363 301908 . - . ID=gene-LDO09_RS01680;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LDO09_RS01680;old_locus_tag=TthAA11_03250 NZ_AP024926.1 Protein Homology CDS 301363 301908 . - 0 ID=cds-WP_011174268.1;Parent=gene-LDO09_RS01680;Dbxref=Genbank:WP_011174268.1;Name=WP_011174268.1;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328966.1;locus_tag=LDO09_RS01680;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_011174268.1;transl_table=11 NZ_AP024926.1 RefSeq gene 301919 303148 . - . ID=gene-LDO09_RS01685;Name=nuoD;gbkey=Gene;gene=nuoD;gene_biotype=protein_coding;locus_tag=LDO09_RS01685;old_locus_tag=TthAA11_03260 NZ_AP024926.1 Protein Homology CDS 301919 303148 . - 0 ID=cds-WP_143584598.1;Parent=gene-LDO09_RS01685;Dbxref=Genbank:WP_143584598.1;Name=WP_143584598.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoD;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174269.1;locus_tag=LDO09_RS01685;product=NADH dehydrogenase (quinone) subunit D;protein_id=WP_143584598.1;transl_table=11 NZ_AP024926.1 RefSeq gene 303145 303768 . - . ID=gene-LDO09_RS01690;Name=LDO09_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01690;old_locus_tag=TthAA11_03270 NZ_AP024926.1 Protein Homology CDS 303145 303768 . - 0 ID=cds-WP_143584600.1;Parent=gene-LDO09_RS01690;Dbxref=Genbank:WP_143584600.1;Name=WP_143584600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174270.1;locus_tag=LDO09_RS01690;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_143584600.1;transl_table=11 NZ_AP024926.1 RefSeq gene 303772 304317 . - . ID=gene-LDO09_RS01695;Name=LDO09_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01695;old_locus_tag=TthAA11_03280 NZ_AP024926.1 Protein Homology CDS 303772 304317 . - 0 ID=cds-WP_124105006.1;Parent=gene-LDO09_RS01695;Dbxref=Genbank:WP_124105006.1;Name=WP_124105006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174271.1;locus_tag=LDO09_RS01695;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_124105006.1;transl_table=11 NZ_AP024926.1 RefSeq gene 304308 304667 . - . ID=gene-LDO09_RS01700;Name=LDO09_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01700;old_locus_tag=TthAA11_03290 NZ_AP024926.1 Protein Homology CDS 304308 304667 . - 0 ID=cds-WP_011174272.1;Parent=gene-LDO09_RS01700;Dbxref=Genbank:WP_011174272.1;Name=WP_011174272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716519.1;locus_tag=LDO09_RS01700;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_011174272.1;transl_table=11 NZ_AP024926.1 RefSeq gene 304823 305638 . - . ID=gene-LDO09_RS01705;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LDO09_RS01705;old_locus_tag=TthAA11_03300 NZ_AP024926.1 Protein Homology CDS 304823 305638 . - 0 ID=cds-WP_143584602.1;Parent=gene-LDO09_RS01705;Dbxref=Genbank:WP_143584602.1;Name=WP_143584602.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174273.1;locus_tag=LDO09_RS01705;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_143584602.1;transl_table=11 NZ_AP024926.1 RefSeq gene 305631 306374 . - . ID=gene-LDO09_RS01710;Name=LDO09_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01710;old_locus_tag=TthAA11_03310 NZ_AP024926.1 Protein Homology CDS 305631 306374 . - 0 ID=cds-WP_143584605.1;Parent=gene-LDO09_RS01710;Dbxref=Genbank:WP_143584605.1;Name=WP_143584605.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630197.1;locus_tag=LDO09_RS01710;product=metallophosphoesterase;protein_id=WP_143584605.1;transl_table=11 NZ_AP024926.1 RefSeq gene 306371 307009 . - . ID=gene-LDO09_RS01715;Name=LDO09_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01715;old_locus_tag=TthAA11_03320 NZ_AP024926.1 Protein Homology CDS 306371 307009 . - 0 ID=cds-WP_143584607.1;Parent=gene-LDO09_RS01715;Dbxref=Genbank:WP_143584607.1;Name=WP_143584607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174275.1;locus_tag=LDO09_RS01715;product=Rad52/Rad22 family DNA repair protein;protein_id=WP_143584607.1;transl_table=11 NZ_AP024926.1 RefSeq gene 307073 307411 . + . ID=gene-LDO09_RS01720;Name=LDO09_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01720;old_locus_tag=TthAA11_03330 NZ_AP024926.1 Protein Homology CDS 307073 307411 . + 0 ID=cds-WP_143584610.1;Parent=gene-LDO09_RS01720;Dbxref=Genbank:WP_143584610.1;Name=WP_143584610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631079.1;locus_tag=LDO09_RS01720;product=hypothetical protein;protein_id=WP_143584610.1;transl_table=11 NZ_AP024926.1 RefSeq gene 307449 307524 . + . ID=gene-LDO09_RS01725;Name=LDO09_RS01725;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS01725;old_locus_tag=TthAA11_t00160 NZ_AP024926.1 tRNAscan-SE tRNA 307449 307524 . + . ID=rna-LDO09_RS01725;Parent=gene-LDO09_RS01725;anticodon=(pos:307482..307484);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS01725;product=tRNA-Ala NZ_AP024926.1 tRNAscan-SE exon 307449 307524 . + . ID=exon-LDO09_RS01725-1;Parent=rna-LDO09_RS01725;anticodon=(pos:307482..307484);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS01725;product=tRNA-Ala NZ_AP024926.1 RefSeq gene 307566 307745 . - . ID=gene-LDO09_RS01730;Name=LDO09_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01730;old_locus_tag=TthAA11_03340 NZ_AP024926.1 Protein Homology CDS 307566 307745 . - 0 ID=cds-WP_008631081.1;Parent=gene-LDO09_RS01730;Dbxref=Genbank:WP_008631081.1;Name=WP_008631081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630194.1;locus_tag=LDO09_RS01730;product=hypothetical protein;protein_id=WP_008631081.1;transl_table=11 NZ_AP024926.1 RefSeq gene 307927 308768 . + . ID=gene-LDO09_RS01735;Name=LDO09_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01735 NZ_AP024926.1 Protein Homology CDS 307927 308281 . + 0 ID=cds-WP_223968841.1;Parent=gene-LDO09_RS01735;Dbxref=Genbank:WP_223968841.1;Name=WP_223968841.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336521.1;locus_tag=LDO09_RS01735;product=IS5 family transposase;protein_id=WP_223968841.1;transl_table=11 NZ_AP024926.1 Protein Homology CDS 308281 308768 . + 2 ID=cds-WP_223968841.1;Parent=gene-LDO09_RS01735;Dbxref=Genbank:WP_223968841.1;Name=WP_223968841.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336521.1;locus_tag=LDO09_RS01735;product=IS5 family transposase;protein_id=WP_223968841.1;transl_table=11 NZ_AP024926.1 RefSeq gene 308824 309006 . + . ID=gene-LDO09_RS01740;Name=LDO09_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01740;old_locus_tag=TthAA11_03370 NZ_AP024926.1 GeneMarkS-2+ CDS 308824 309006 . + 0 ID=cds-WP_143584613.1;Parent=gene-LDO09_RS01740;Dbxref=Genbank:WP_143584613.1;Name=WP_143584613.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS01740;product=hypothetical protein;protein_id=WP_143584613.1;transl_table=11 NZ_AP024926.1 RefSeq gene 309009 309728 . + . ID=gene-LDO09_RS01745;Name=cas6;gbkey=Gene;gene=cas6;gene_biotype=protein_coding;locus_tag=LDO09_RS01745;old_locus_tag=TthAA11_03380 NZ_AP024926.1 Protein Homology CDS 309009 309728 . + 0 ID=cds-WP_223968842.1;Parent=gene-LDO09_RS01745;Dbxref=Genbank:WP_223968842.1;Name=WP_223968842.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas6;go_function=endoribonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630193.1;locus_tag=LDO09_RS01745;product=CRISPR-associated endoribonuclease Cas6;protein_id=WP_223968842.1;transl_table=11 NZ_AP024926.1 RefSeq gene 309800 310594 . - . ID=gene-LDO09_RS01750;Name=LDO09_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01750;old_locus_tag=TthAA11_03390 NZ_AP024926.1 Protein Homology CDS 309800 310594 . - 0 ID=cds-WP_008631085.1;Parent=gene-LDO09_RS01750;Dbxref=Genbank:WP_008631085.1;Name=WP_008631085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227694.1;locus_tag=LDO09_RS01750;product=inositol monophosphatase family protein;protein_id=WP_008631085.1;transl_table=11 NZ_AP024926.1 RefSeq gene 310591 311202 . - . ID=gene-LDO09_RS01755;Name=LDO09_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01755;old_locus_tag=TthAA11_03400 NZ_AP024926.1 Protein Homology CDS 310591 311202 . - 0 ID=cds-WP_143584616.1;Parent=gene-LDO09_RS01755;Dbxref=Genbank:WP_143584616.1;Name=WP_143584616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227693.1;locus_tag=LDO09_RS01755;product=phosphoribosylanthranilate isomerase;protein_id=WP_143584616.1;transl_table=11 NZ_AP024926.1 RefSeq gene 311299 315387 . - . ID=gene-LDO09_RS01760;Name=LDO09_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01760;old_locus_tag=TthAA11_03410 NZ_AP024926.1 Protein Homology CDS 311299 315387 . - 0 ID=cds-WP_172619153.1;Parent=gene-LDO09_RS01760;Dbxref=Genbank:WP_172619153.1;Name=WP_172619153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174281.1;locus_tag=LDO09_RS01760;product=ribonucleoside-diphosphate reductase;protein_id=WP_172619153.1;transl_table=11 NZ_AP024926.1 RefSeq gene 315577 318051 . + . ID=gene-LDO09_RS01765;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=LDO09_RS01765;old_locus_tag=TthAA11_03420 NZ_AP024926.1 Protein Homology CDS 315577 318051 . + 0 ID=cds-WP_143584620.1;Parent=gene-LDO09_RS01765;Dbxref=Genbank:WP_143584620.1;Name=WP_143584620.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509854.1;locus_tag=LDO09_RS01765;product=type I DNA topoisomerase;protein_id=WP_143584620.1;transl_table=11 NZ_AP024926.1 RefSeq gene 318051 318314 . + . ID=gene-LDO09_RS01770;Name=LDO09_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01770;old_locus_tag=TthAA11_03430 NZ_AP024926.1 Protein Homology CDS 318051 318314 . + 0 ID=cds-WP_011174283.1;Parent=gene-LDO09_RS01770;Dbxref=Genbank:WP_011174283.1;Name=WP_011174283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174283.1;locus_tag=LDO09_RS01770;product=hypothetical protein;protein_id=WP_011174283.1;transl_table=11 NZ_AP024926.1 RefSeq gene 318256 319374 . - . ID=gene-LDO09_RS01775;Name=LDO09_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01775;old_locus_tag=TthAA11_03440 NZ_AP024926.1 Protein Homology CDS 318256 319374 . - 0 ID=cds-WP_143584622.1;Parent=gene-LDO09_RS01775;Dbxref=Genbank:WP_143584622.1;Name=WP_143584622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631087.1;locus_tag=LDO09_RS01775;product=VanW family protein;protein_id=WP_143584622.1;transl_table=11 NZ_AP024926.1 RefSeq gene 319497 320171 . - . ID=gene-LDO09_RS01780;Name=LDO09_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01780;old_locus_tag=TthAA11_03450 NZ_AP024926.1 Protein Homology CDS 319497 320171 . - 0 ID=cds-WP_143584624.1;Parent=gene-LDO09_RS01780;Dbxref=Genbank:WP_143584624.1;Name=WP_143584624.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630188.1;locus_tag=LDO09_RS01780;product=ATP-binding cassette domain-containing protein;protein_id=WP_143584624.1;transl_table=11 NZ_AP024926.1 RefSeq gene 320168 320803 . - . ID=gene-LDO09_RS01785;Name=LDO09_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01785;old_locus_tag=TthAA11_03460 NZ_AP024926.1 Protein Homology CDS 320168 320803 . - 0 ID=cds-WP_143584625.1;Parent=gene-LDO09_RS01785;Dbxref=Genbank:WP_143584625.1;Name=WP_143584625.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174286.1;locus_tag=LDO09_RS01785;product=ABC transporter permease;protein_id=WP_143584625.1;transl_table=11 NZ_AP024926.1 RefSeq gene 320806 321594 . - . ID=gene-LDO09_RS01790;Name=LDO09_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01790;old_locus_tag=TthAA11_03470 NZ_AP024926.1 Protein Homology CDS 320806 321594 . - 0 ID=cds-WP_172619154.1;Parent=gene-LDO09_RS01790;Dbxref=Genbank:WP_172619154.1;Name=WP_172619154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630187.1;locus_tag=LDO09_RS01790;product=substrate-binding domain-containing protein;protein_id=WP_172619154.1;transl_table=11 NZ_AP024926.1 RefSeq gene 321628 321909 . + . ID=gene-LDO09_RS01795;Name=LDO09_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01795;old_locus_tag=TthAA11_03480 NZ_AP024926.1 Protein Homology CDS 321628 321909 . + 0 ID=cds-WP_172619223.1;Parent=gene-LDO09_RS01795;Dbxref=Genbank:WP_172619223.1;Name=WP_172619223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630186.1;locus_tag=LDO09_RS01795;product=DUF309 domain-containing protein;protein_id=WP_172619223.1;transl_table=11 NZ_AP024926.1 RefSeq gene 321906 322886 . + . ID=gene-LDO09_RS01800;Name=LDO09_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01800;old_locus_tag=TthAA11_03490 NZ_AP024926.1 Protein Homology CDS 321906 322886 . + 0 ID=cds-WP_011174289.1;Parent=gene-LDO09_RS01800;Dbxref=Genbank:WP_011174289.1;Name=WP_011174289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174289.1;locus_tag=LDO09_RS01800;product=asparaginase;protein_id=WP_011174289.1;transl_table=11 NZ_AP024926.1 RefSeq gene 322917 323225 . - . ID=gene-LDO09_RS01805;Name=LDO09_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01805;old_locus_tag=TthAA11_03500 NZ_AP024926.1 Protein Homology CDS 322917 323225 . - 0 ID=cds-WP_014509860.1;Parent=gene-LDO09_RS01805;Dbxref=Genbank:WP_014509860.1;Name=WP_014509860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509860.1;locus_tag=LDO09_RS01805;product=DUF4282 domain-containing protein;protein_id=WP_014509860.1;transl_table=11 NZ_AP024926.1 RefSeq gene 323281 323940 . - . ID=gene-LDO09_RS01810;Name=LDO09_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01810;old_locus_tag=TthAA11_03510 NZ_AP024926.1 Protein Homology CDS 323281 323940 . - 0 ID=cds-WP_143584633.1;Parent=gene-LDO09_RS01810;Dbxref=Genbank:WP_143584633.1;Name=WP_143584633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630184.1;locus_tag=LDO09_RS01810;product=DUF5639 domain-containing protein;protein_id=WP_143584633.1;transl_table=11 NZ_AP024926.1 RefSeq gene 323963 325426 . - . ID=gene-LDO09_RS01815;Name=LDO09_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01815;old_locus_tag=TthAA11_03520 NZ_AP024926.1 Protein Homology CDS 323963 325426 . - 0 ID=cds-WP_223968844.1;Parent=gene-LDO09_RS01815;Dbxref=Genbank:WP_223968844.1;Name=WP_223968844.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630183.1;locus_tag=LDO09_RS01815;product=IS200/IS605 family accessory protein TnpB-related protein;protein_id=WP_223968844.1;transl_table=11 NZ_AP024926.1 RefSeq gene 325559 326779 . + . ID=gene-LDO09_RS01820;Name=LDO09_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01820;old_locus_tag=TthAA11_03530 NZ_AP024926.1 Protein Homology CDS 325559 326779 . + 0 ID=cds-WP_143586034.1;Parent=gene-LDO09_RS01820;Dbxref=Genbank:WP_143586034.1;Name=WP_143586034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1;locus_tag=LDO09_RS01820;product=IS256-like element ISTth4 family transposase;protein_id=WP_143586034.1;transl_table=11 NZ_AP024926.1 RefSeq gene 326931 328001 . - . ID=gene-LDO09_RS01825;Name=LDO09_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01825;old_locus_tag=TthAA11_03540 NZ_AP024926.1 Protein Homology CDS 326931 328001 . - 0 ID=cds-WP_143584635.1;Parent=gene-LDO09_RS01825;Dbxref=Genbank:WP_143584635.1;Name=WP_143584635.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630182.1;locus_tag=LDO09_RS01825;product=MFS transporter;protein_id=WP_143584635.1;transl_table=11 NZ_AP024926.1 RefSeq gene 328019 330145 . + . ID=gene-LDO09_RS01830;Name=LDO09_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01830;old_locus_tag=TthAA11_03550 NZ_AP024926.1 Protein Homology CDS 328019 330145 . + 0 ID=cds-WP_172619155.1;Parent=gene-LDO09_RS01830;Dbxref=Genbank:WP_172619155.1;Name=WP_172619155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630181.1;locus_tag=LDO09_RS01830;product=primosomal protein N';protein_id=WP_172619155.1;transl_table=11 NZ_AP024926.1 RefSeq gene 330187 331242 . + . ID=gene-LDO09_RS01835;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LDO09_RS01835;old_locus_tag=TthAA11_03560 NZ_AP024926.1 Protein Homology CDS 330187 331242 . + 0 ID=cds-WP_223965922.1;Parent=gene-LDO09_RS01835;Dbxref=Genbank:WP_223965922.1;Name=WP_223965922.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509865.1;locus_tag=LDO09_RS01835;product=alanine racemase;protein_id=WP_223965922.1;transl_table=11 NZ_AP024926.1 RefSeq gene 331252 331572 . + . ID=gene-LDO09_RS01840;Name=LDO09_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01840;old_locus_tag=TthAA11_03570 NZ_AP024926.1 Protein Homology CDS 331252 331572 . + 0 ID=cds-WP_143584638.1;Parent=gene-LDO09_RS01840;Dbxref=Genbank:WP_143584638.1;Name=WP_143584638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227682.1;locus_tag=LDO09_RS01840;product=DUF3208 domain-containing protein;protein_id=WP_143584638.1;transl_table=11 NZ_AP024926.1 RefSeq gene 331559 331798 . - . ID=gene-LDO09_RS01845;Name=LDO09_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01845;old_locus_tag=TthAA11_03580 NZ_AP024926.1 Protein Homology CDS 331559 331798 . - 0 ID=cds-WP_143584640.1;Parent=gene-LDO09_RS01845;Dbxref=Genbank:WP_143584640.1;Name=WP_143584640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174297.1;locus_tag=LDO09_RS01845;product=hypothetical protein;protein_id=WP_143584640.1;transl_table=11 NZ_AP024926.1 RefSeq gene 331872 332543 . - . ID=gene-LDO09_RS01850;Name=LDO09_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01850;old_locus_tag=TthAA11_03590 NZ_AP024926.1 Protein Homology CDS 331872 332543 . - 0 ID=cds-WP_011174298.1;Parent=gene-LDO09_RS01850;Dbxref=Genbank:WP_011174298.1;Name=WP_011174298.1;Ontology_term=GO:0006777;gbkey=CDS;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227680.1;locus_tag=LDO09_RS01850;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_011174298.1;transl_table=11 NZ_AP024926.1 RefSeq gene 332533 333435 . - . ID=gene-LDO09_RS01855;Name=LDO09_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01855;old_locus_tag=TthAA11_03600 NZ_AP024926.1 Protein Homology CDS 332533 333435 . - 0 ID=cds-WP_143584641.1;Parent=gene-LDO09_RS01855;Dbxref=Genbank:WP_143584641.1;Name=WP_143584641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174299.1;locus_tag=LDO09_RS01855;product=HrcA family transcriptional regulator;protein_id=WP_143584641.1;transl_table=11 NZ_AP024926.1 RefSeq gene 333440 333790 . - . ID=gene-LDO09_RS01860;Name=LDO09_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01860;old_locus_tag=TthAA11_03610 NZ_AP024926.1 Protein Homology CDS 333440 333790 . - 0 ID=cds-WP_024118920.1;Parent=gene-LDO09_RS01860;Dbxref=Genbank:WP_024118920.1;Name=WP_024118920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330194.1;locus_tag=LDO09_RS01860;product=P-II family nitrogen regulator;protein_id=WP_024118920.1;transl_table=11 NZ_AP024926.1 RefSeq gene 333787 335127 . - . ID=gene-LDO09_RS01865;Name=LDO09_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01865;old_locus_tag=TthAA11_03620 NZ_AP024926.1 Protein Homology CDS 333787 335127 . - 0 ID=cds-WP_143584643.1;Parent=gene-LDO09_RS01865;Dbxref=Genbank:WP_143584643.1;Name=WP_143584643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509868.1;locus_tag=LDO09_RS01865;product=ammonium transporter;protein_id=WP_143584643.1;transl_table=11 NZ_AP024926.1 RefSeq gene 335343 336878 . + . ID=gene-LDO09_RS01870;Name=LDO09_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01870;old_locus_tag=TthAA11_03630 NZ_AP024926.1 Protein Homology CDS 335343 336878 . + 0 ID=cds-WP_014630175.1;Parent=gene-LDO09_RS01870;Dbxref=Genbank:WP_014630175.1;Name=WP_014630175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630175.1;locus_tag=LDO09_RS01870;product=putative DNA binding domain-containing protein;protein_id=WP_014630175.1;transl_table=11 NZ_AP024926.1 RefSeq gene 336878 337327 . + . ID=gene-LDO09_RS01875;Name=LDO09_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01875;old_locus_tag=TthAA11_03640 NZ_AP024926.1 Protein Homology CDS 336878 337327 . + 0 ID=cds-WP_143584644.1;Parent=gene-LDO09_RS01875;Dbxref=Genbank:WP_143584644.1;Name=WP_143584644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509869.1;locus_tag=LDO09_RS01875;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_143584644.1;transl_table=11 NZ_AP024926.1 RefSeq gene 337314 337946 . - . ID=gene-LDO09_RS01880;Name=LDO09_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01880;old_locus_tag=TthAA11_03650 NZ_AP024926.1 Protein Homology CDS 337314 337946 . - 0 ID=cds-WP_172619156.1;Parent=gene-LDO09_RS01880;Dbxref=Genbank:WP_172619156.1;Name=WP_172619156.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630173.1;locus_tag=LDO09_RS01880;product=metallophosphoesterase;protein_id=WP_172619156.1;transl_table=11 NZ_AP024926.1 RefSeq gene 337975 338859 . + . ID=gene-LDO09_RS01885;Name=LDO09_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01885;old_locus_tag=TthAA11_03660 NZ_AP024926.1 Protein Homology CDS 337975 338859 . + 0 ID=cds-WP_143584647.1;Parent=gene-LDO09_RS01885;Dbxref=Genbank:WP_143584647.1;Name=WP_143584647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630172.1;locus_tag=LDO09_RS01885;product=histone deacetylase;protein_id=WP_143584647.1;transl_table=11 NZ_AP024926.1 RefSeq gene 338829 339683 . - . ID=gene-LDO09_RS01890;Name=LDO09_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01890;old_locus_tag=TthAA11_03670 NZ_AP024926.1 Protein Homology CDS 338829 339683 . - 0 ID=cds-WP_143584648.1;Parent=gene-LDO09_RS01890;Dbxref=Genbank:WP_143584648.1;Name=WP_143584648.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227674.1;locus_tag=LDO09_RS01890;product=GNAT family N-acetyltransferase;protein_id=WP_143584648.1;transl_table=11 NZ_AP024926.1 RefSeq gene 339640 340323 . - . ID=gene-LDO09_RS01895;Name=LDO09_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01895;old_locus_tag=TthAA11_03680 NZ_AP024926.1 Protein Homology CDS 339640 340323 . - 0 ID=cds-WP_143584650.1;Parent=gene-LDO09_RS01895;Dbxref=Genbank:WP_143584650.1;Name=WP_143584650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227673.1;locus_tag=LDO09_RS01895;product=histidine phosphatase family protein;protein_id=WP_143584650.1;transl_table=11 NZ_AP024926.1 RefSeq gene 340341 341258 . + . ID=gene-LDO09_RS01900;Name=LDO09_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01900;old_locus_tag=TthAA11_03690 NZ_AP024926.1 Protein Homology CDS 340341 341258 . + 0 ID=cds-WP_143584651.1;Parent=gene-LDO09_RS01900;Dbxref=Genbank:WP_143584651.1;Name=WP_143584651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227672.1;locus_tag=LDO09_RS01900;product=diacylglycerol kinase family lipid kinase;protein_id=WP_143584651.1;transl_table=11 NZ_AP024926.1 RefSeq gene 341466 342623 . + . ID=gene-LDO09_RS01905;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=LDO09_RS01905;old_locus_tag=TthAA11_03700 NZ_AP024926.1 Protein Homology CDS 341466 342623 . + 0 ID=cds-WP_143584653.1;Parent=gene-LDO09_RS01905;Dbxref=Genbank:WP_143584653.1;Name=WP_143584653.1;gbkey=CDS;gene=aspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227669.1;locus_tag=LDO09_RS01905;product=aspartate/prephenate aminotransferase;protein_id=WP_143584653.1;transl_table=11 NZ_AP024926.1 RefSeq gene 342685 343977 . + . ID=gene-LDO09_RS01910;Name=LDO09_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01910;old_locus_tag=TthAA11_03710 NZ_AP024926.1 Protein Homology CDS 342685 343977 . + 0 ID=cds-WP_143584654.1;Parent=gene-LDO09_RS01910;Dbxref=Genbank:WP_143584654.1;Name=WP_143584654.1;Ontology_term=GO:0006813;gbkey=CDS;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509875.1;locus_tag=LDO09_RS01910;product=NAD-binding protein;protein_id=WP_143584654.1;transl_table=11 NZ_AP024926.1 RefSeq gene 343967 345118 . + . ID=gene-LDO09_RS01915;Name=LDO09_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01915;old_locus_tag=TthAA11_03720 NZ_AP024926.1 Protein Homology CDS 343967 345118 . + 0 ID=cds-WP_096411085.1;Parent=gene-LDO09_RS01915;Dbxref=Genbank:WP_096411085.1;Name=WP_096411085.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174312.1;locus_tag=LDO09_RS01915;product=cation:proton antiporter;protein_id=WP_096411085.1;transl_table=11 NZ_AP024926.1 RefSeq gene 345138 345590 . - . ID=gene-LDO09_RS01920;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LDO09_RS01920;old_locus_tag=TthAA11_03730 NZ_AP024926.1 Protein Homology CDS 345138 345590 . - 0 ID=cds-WP_143584656.1;Parent=gene-LDO09_RS01920;Dbxref=Genbank:WP_143584656.1;Name=WP_143584656.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630166.1;locus_tag=LDO09_RS01920;product=signal peptidase II;protein_id=WP_143584656.1;transl_table=11 NZ_AP024926.1 RefSeq gene 345656 345952 . + . ID=gene-LDO09_RS01925;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LDO09_RS01925;old_locus_tag=TthAA11_03740 NZ_AP024926.1 Protein Homology CDS 345656 345952 . + 0 ID=cds-WP_008631133.1;Parent=gene-LDO09_RS01925;Dbxref=Genbank:WP_008631133.1;Name=WP_008631133.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328480.1;locus_tag=LDO09_RS01925;product=50S ribosomal protein L28;protein_id=WP_008631133.1;transl_table=11 NZ_AP024926.1 RefSeq gene 346145 346840 . + . ID=gene-LDO09_RS01930;Name=LDO09_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01930;old_locus_tag=TthAA11_03750 NZ_AP024926.1 Protein Homology CDS 346145 346840 . + 0 ID=cds-WP_014509878.1;Parent=gene-LDO09_RS01930;Dbxref=Genbank:WP_014509878.1;Name=WP_014509878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631134.1;locus_tag=LDO09_RS01930;product=M23 family metallopeptidase;protein_id=WP_014509878.1;transl_table=11 NZ_AP024926.1 RefSeq gene 346837 348186 . - . ID=gene-LDO09_RS01935;Name=LDO09_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01935;old_locus_tag=TthAA11_03760 NZ_AP024926.1 Protein Homology CDS 346837 348186 . - 0 ID=cds-WP_143584658.1;Parent=gene-LDO09_RS01935;Dbxref=Genbank:WP_143584658.1;Name=WP_143584658.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630164.1;locus_tag=LDO09_RS01935;product=FAD-binding protein;protein_id=WP_143584658.1;transl_table=11 NZ_AP024926.1 RefSeq gene 348197 349336 . - . ID=gene-LDO09_RS01940;Name=LDO09_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01940;old_locus_tag=TthAA11_03770 NZ_AP024926.1 Protein Homology CDS 348197 349336 . - 0 ID=cds-WP_143584660.1;Parent=gene-LDO09_RS01940;Dbxref=Genbank:WP_143584660.1;Name=WP_143584660.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328903.1;locus_tag=LDO09_RS01940;product=MFS transporter;protein_id=WP_143584660.1;transl_table=11 NZ_AP024926.1 RefSeq gene 349403 350557 . - . ID=gene-LDO09_RS01945;Name=LDO09_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01945;old_locus_tag=TthAA11_03780 NZ_AP024926.1 Protein Homology CDS 349403 350557 . - 0 ID=cds-WP_143584661.1;Parent=gene-LDO09_RS01945;Dbxref=Genbank:WP_143584661.1;Name=WP_143584661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227663.1;locus_tag=LDO09_RS01945;product=hypothetical protein;protein_id=WP_143584661.1;transl_table=11 NZ_AP024926.1 RefSeq gene 350574 351140 . - . ID=gene-LDO09_RS01950;Name=LDO09_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01950;old_locus_tag=TthAA11_03790 NZ_AP024926.1 Protein Homology CDS 350574 351140 . - 0 ID=cds-WP_223965928.1;Parent=gene-LDO09_RS01950;Dbxref=Genbank:WP_223965928.1;Name=WP_223965928.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=LDO09_RS01950;product=MFS transporter;protein_id=WP_223965928.1;transl_table=11 NZ_AP024926.1 RefSeq gene 351198 351815 . + . ID=gene-LDO09_RS01955;Name=LDO09_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01955;old_locus_tag=TthAA11_03800 NZ_AP024926.1 Protein Homology CDS 351198 351815 . + 0 ID=cds-WP_143584662.1;Parent=gene-LDO09_RS01955;Dbxref=Genbank:WP_143584662.1;Name=WP_143584662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461165.1;locus_tag=LDO09_RS01955;product=hypothetical protein;protein_id=WP_143584662.1;transl_table=11 NZ_AP024926.1 RefSeq gene 351910 352869 . - . ID=gene-LDO09_RS01960;Name=LDO09_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01960;old_locus_tag=TthAA11_03810 NZ_AP024926.1 Protein Homology CDS 351910 352869 . - 0 ID=cds-WP_172619157.1;Parent=gene-LDO09_RS01960;Dbxref=Genbank:WP_172619157.1;Name=WP_172619157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551318.1;locus_tag=LDO09_RS01960;product=aldo/keto reductase family protein;protein_id=WP_172619157.1;transl_table=11 NZ_AP024926.1 RefSeq gene 352913 353122 . - . ID=gene-LDO09_RS01965;Name=LDO09_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01965;old_locus_tag=TthAA11_03820 NZ_AP024926.1 Protein Homology CDS 352913 353122 . - 0 ID=cds-WP_011227652.1;Parent=gene-LDO09_RS01965;Dbxref=Genbank:WP_011227652.1;Name=WP_011227652.1;Ontology_term=GO:0051537,GO:0043231;gbkey=CDS;go_component=intracellular membrane-bounded organelle|0043231||IEA;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631527.1;locus_tag=LDO09_RS01965;product=CDGSH iron-sulfur domain-containing protein;protein_id=WP_011227652.1;transl_table=11 NZ_AP024926.1 RefSeq gene 353132 353605 . - . ID=gene-LDO09_RS01970;Name=LDO09_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01970;old_locus_tag=TthAA11_03830 NZ_AP024926.1 Protein Homology CDS 353132 353605 . - 0 ID=cds-WP_011174321.1;Parent=gene-LDO09_RS01970;Dbxref=Genbank:WP_011174321.1;Name=WP_011174321.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631529.1;locus_tag=LDO09_RS01970;product=AbrB family transcriptional regulator;protein_id=WP_011174321.1;transl_table=11 NZ_AP024926.1 RefSeq gene 353634 355949 . + . ID=gene-LDO09_RS01975;Name=LDO09_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01975;old_locus_tag=TthAA11_03840 NZ_AP024926.1 Protein Homology CDS 353634 355949 . + 0 ID=cds-WP_223965932.1;Parent=gene-LDO09_RS01975;Dbxref=Genbank:WP_223965932.1;Name=WP_223965932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630158.1;locus_tag=LDO09_RS01975;product=penicillin acylase family protein;protein_id=WP_223965932.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 356035 356757 . - . ID=gene-LDO09_RS01980;Name=LDO09_RS01980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS01980;partial=true;pseudo=true;start_range=.,356035 NZ_AP024926.1 Protein Homology CDS 356035 356757 . - 0 ID=cds-LDO09_RS01980;Parent=gene-LDO09_RS01980;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013180.2;locus_tag=LDO09_RS01980;partial=true;product=GGDEF domain-containing protein;pseudo=true;start_range=.,356035;transl_table=11 NZ_AP024926.1 RefSeq gene 356785 357141 . - . ID=gene-LDO09_RS01985;Name=LDO09_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01985;old_locus_tag=TthAA11_03860 NZ_AP024926.1 Protein Homology CDS 356785 357141 . - 0 ID=cds-WP_011174324.1;Parent=gene-LDO09_RS01985;Dbxref=Genbank:WP_011174324.1;Name=WP_011174324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174324.1;locus_tag=LDO09_RS01985;product=hypothetical protein;protein_id=WP_011174324.1;transl_table=11 NZ_AP024926.1 RefSeq gene 357152 359239 . - . ID=gene-LDO09_RS01990;Name=LDO09_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS01990;old_locus_tag=TthAA11_03870 NZ_AP024926.1 Protein Homology CDS 357152 359239 . - 0 ID=cds-WP_143584667.1;Parent=gene-LDO09_RS01990;Dbxref=Genbank:WP_143584667.1;Name=WP_143584667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509886.1;locus_tag=LDO09_RS01990;product=AAA family ATPase;protein_id=WP_143584667.1;transl_table=11 NZ_AP024926.1 RefSeq gene 359305 360549 . + . ID=gene-LDO09_RS01995;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=LDO09_RS01995;old_locus_tag=TthAA11_03880 NZ_AP024926.1 Protein Homology CDS 359305 360549 . + 0 ID=cds-WP_143584669.1;Parent=gene-LDO09_RS01995;Dbxref=Genbank:WP_143584669.1;Name=WP_143584669.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631183.1;locus_tag=LDO09_RS01995;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_143584669.1;transl_table=11 NZ_AP024926.1 RefSeq gene 360552 361238 . + . ID=gene-LDO09_RS02000;Name=LDO09_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02000;old_locus_tag=TthAA11_03890 NZ_AP024926.1 Protein Homology CDS 360552 361238 . + 0 ID=cds-WP_143584671.1;Parent=gene-LDO09_RS02000;Dbxref=Genbank:WP_143584671.1;Name=WP_143584671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633992.1;locus_tag=LDO09_RS02000;product=SagB/ThcOx family dehydrogenase;protein_id=WP_143584671.1;transl_table=11 NZ_AP024926.1 RefSeq gene 361247 361918 . + . ID=gene-LDO09_RS02005;Name=LDO09_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02005;old_locus_tag=TthAA11_03900 NZ_AP024926.1 Protein Homology CDS 361247 361918 . + 0 ID=cds-WP_143584673.1;Parent=gene-LDO09_RS02005;Dbxref=Genbank:WP_143584673.1;Name=WP_143584673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631184.1;locus_tag=LDO09_RS02005;product=response regulator transcription factor;protein_id=WP_143584673.1;transl_table=11 NZ_AP024926.1 RefSeq gene 361945 362316 . + . ID=gene-LDO09_RS02010;Name=LDO09_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02010;old_locus_tag=TthAA11_03910 NZ_AP024926.1 Protein Homology CDS 361945 362316 . + 0 ID=cds-WP_143584675.1;Parent=gene-LDO09_RS02010;Dbxref=Genbank:WP_143584675.1;Name=WP_143584675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174329.1;locus_tag=LDO09_RS02010;product=gamma-glutamylcyclotransferase;protein_id=WP_143584675.1;transl_table=11 NZ_AP024926.1 RefSeq gene 362318 363640 . + . ID=gene-LDO09_RS02015;Name=LDO09_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02015;old_locus_tag=TthAA11_03920 NZ_AP024926.1 Protein Homology CDS 362318 363640 . + 0 ID=cds-WP_143584677.1;Parent=gene-LDO09_RS02015;Dbxref=Genbank:WP_143584677.1;Name=WP_143584677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174330.1;locus_tag=LDO09_RS02015;product=glycogen synthase;protein_id=WP_143584677.1;transl_table=11 NZ_AP024926.1 RefSeq gene 363642 364274 . + . ID=gene-LDO09_RS02020;Name=LDO09_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02020;old_locus_tag=TthAA11_03930 NZ_AP024926.1 Protein Homology CDS 363642 364274 . + 0 ID=cds-WP_143584678.1;Parent=gene-LDO09_RS02020;Dbxref=Genbank:WP_143584678.1;Name=WP_143584678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631187.1;locus_tag=LDO09_RS02020;product=tetratricopeptide repeat protein;protein_id=WP_143584678.1;transl_table=11 NZ_AP024926.1 RefSeq gene 364170 365198 . - . ID=gene-LDO09_RS02025;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=LDO09_RS02025;old_locus_tag=TthAA11_03940 NZ_AP024926.1 Protein Homology CDS 364170 365198 . - 0 ID=cds-WP_143584679.1;Parent=gene-LDO09_RS02025;Dbxref=Genbank:WP_143584679.1;Name=WP_143584679.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227643.1;locus_tag=LDO09_RS02025;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_143584679.1;transl_table=11 NZ_AP024926.1 RefSeq gene 365191 366213 . - . ID=gene-LDO09_RS02030;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=LDO09_RS02030;old_locus_tag=TthAA11_03950 NZ_AP024926.1 Protein Homology CDS 365191 366213 . - 0 ID=cds-WP_143584681.1;Parent=gene-LDO09_RS02030;Dbxref=Genbank:WP_143584681.1;Name=WP_143584681.1;Ontology_term=GO:0009240,GO:0015968,GO:0046677,GO:0051745;gbkey=CDS;gene=ispH;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process|0009240||IEA,stringent response|0015968||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509890.1;locus_tag=LDO09_RS02030;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_143584681.1;transl_table=11 NZ_AP024926.1 RefSeq gene 366215 366811 . - . ID=gene-LDO09_RS02035;Name=LDO09_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02035;old_locus_tag=TthAA11_03960 NZ_AP024926.1 Protein Homology CDS 366215 366811 . - 0 ID=cds-WP_223965942.1;Parent=gene-LDO09_RS02035;Dbxref=Genbank:WP_223965942.1;Name=WP_223965942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631543.1;locus_tag=LDO09_RS02035;product=hypothetical protein;protein_id=WP_223965942.1;transl_table=11 NZ_AP024926.1 RefSeq gene 366799 366990 . - . ID=gene-LDO09_RS02040;Name=LDO09_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02040;old_locus_tag=TthAA11_03970 NZ_AP024926.1 Protein Homology CDS 366799 366990 . - 0 ID=cds-WP_008631554.1;Parent=gene-LDO09_RS02040;Dbxref=Genbank:WP_008631554.1;Name=WP_008631554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631191.1;locus_tag=LDO09_RS02040;product=hypothetical protein;protein_id=WP_008631554.1;transl_table=11 NZ_AP024926.1 RefSeq gene 366998 367990 . - . ID=gene-LDO09_RS02045;Name=LDO09_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02045;old_locus_tag=TthAA11_03980 NZ_AP024926.1 Protein Homology CDS 366998 367990 . - 0 ID=cds-WP_223968846.1;Parent=gene-LDO09_RS02045;Dbxref=Genbank:WP_223968846.1;Name=WP_223968846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630146.1;locus_tag=LDO09_RS02045;product=polyprenyl synthetase family protein;protein_id=WP_223968846.1;transl_table=11 NZ_AP024926.1 RefSeq gene 368008 368838 . + . ID=gene-LDO09_RS02050;Name=LDO09_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02050;old_locus_tag=TthAA11_03990 NZ_AP024926.1 Protein Homology CDS 368008 368838 . + 0 ID=cds-WP_011227640.1;Parent=gene-LDO09_RS02050;Dbxref=Genbank:WP_011227640.1;Name=WP_011227640.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630145.1;locus_tag=LDO09_RS02050;product=DMT family transporter;protein_id=WP_011227640.1;transl_table=11 NZ_AP024926.1 RefSeq gene 368816 369793 . - . ID=gene-LDO09_RS02055;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=LDO09_RS02055;old_locus_tag=TthAA11_04000 NZ_AP024926.1 Protein Homology CDS 368816 369793 . - 0 ID=cds-WP_165740014.1;Parent=gene-LDO09_RS02055;Dbxref=Genbank:WP_165740014.1;Name=WP_165740014.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330081.1;locus_tag=LDO09_RS02055;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_165740014.1;transl_table=11 NZ_AP024926.1 RefSeq gene 369878 369953 . - . ID=gene-LDO09_RS02060;Name=LDO09_RS02060;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS02060;old_locus_tag=TthAA11_t00170 NZ_AP024926.1 tRNAscan-SE tRNA 369878 369953 . - . ID=rna-LDO09_RS02060;Parent=gene-LDO09_RS02060;anticodon=(pos:complement(369918..369920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS02060;product=tRNA-Gly NZ_AP024926.1 tRNAscan-SE exon 369878 369953 . - . ID=exon-LDO09_RS02060-1;Parent=rna-LDO09_RS02060;anticodon=(pos:complement(369918..369920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS02060;product=tRNA-Gly NZ_AP024926.1 RefSeq gene 369966 370082 . - . ID=gene-LDO09_RS02065;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LDO09_RS02065;old_locus_tag=TthAA11_r00040 NZ_AP024926.1 cmsearch rRNA 369966 370082 . - . ID=rna-LDO09_RS02065;Parent=gene-LDO09_RS02065;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS02065;product=5S ribosomal RNA NZ_AP024926.1 cmsearch exon 369966 370082 . - . ID=exon-LDO09_RS02065-1;Parent=rna-LDO09_RS02065;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS02065;product=5S ribosomal RNA NZ_AP024926.1 RefSeq gene 370166 373077 . - . ID=gene-LDO09_RS02070;Name=LDO09_RS02070;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO09_RS02070;old_locus_tag=TthAA11_r00050 NZ_AP024926.1 cmsearch rRNA 370166 373077 . - . ID=rna-LDO09_RS02070;Parent=gene-LDO09_RS02070;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS02070;product=23S ribosomal RNA NZ_AP024926.1 cmsearch exon 370166 373077 . - . ID=exon-LDO09_RS02070-1;Parent=rna-LDO09_RS02070;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS02070;product=23S ribosomal RNA NZ_AP024926.1 RefSeq gene 373234 374004 . + . ID=gene-LDO09_RS02075;Name=LDO09_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02075;old_locus_tag=TthAA11_04010 NZ_AP024926.1 Protein Homology CDS 373234 374004 . + 0 ID=cds-WP_011172461.1;Parent=gene-LDO09_RS02075;Dbxref=Genbank:WP_011172461.1;Name=WP_011172461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172461.1;locus_tag=LDO09_RS02075;product=SDR family oxidoreductase;protein_id=WP_011172461.1;transl_table=11 NZ_AP024926.1 RefSeq gene 374065 374607 . - . ID=gene-LDO09_RS02080;Name=LDO09_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02080;old_locus_tag=TthAA11_04020 NZ_AP024926.1 Protein Homology CDS 374065 374607 . - 0 ID=cds-WP_011227885.1;Parent=gene-LDO09_RS02080;Dbxref=Genbank:WP_011227885.1;Name=WP_011227885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227885.1;locus_tag=LDO09_RS02080;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011227885.1;transl_table=11 NZ_AP024926.1 RefSeq gene 374634 375953 . + . ID=gene-LDO09_RS02085;Name=LDO09_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02085;old_locus_tag=TthAA11_04030 NZ_AP024926.1 Protein Homology CDS 374634 375953 . + 0 ID=cds-WP_143584688.1;Parent=gene-LDO09_RS02085;Dbxref=Genbank:WP_143584688.1;Name=WP_143584688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631575.1;locus_tag=LDO09_RS02085;product=PASTA domain-containing protein;protein_id=WP_143584688.1;transl_table=11 NZ_AP024926.1 RefSeq gene 375941 376279 . + . ID=gene-LDO09_RS02090;Name=LDO09_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02090;old_locus_tag=TthAA11_04040 NZ_AP024926.1 Protein Homology CDS 375941 376279 . + 0 ID=cds-WP_143584690.1;Parent=gene-LDO09_RS02090;Dbxref=Genbank:WP_143584690.1;Name=WP_143584690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631576.1;locus_tag=LDO09_RS02090;product=YraN family protein;protein_id=WP_143584690.1;transl_table=11 NZ_AP024926.1 RefSeq gene 376294 378102 . + . ID=gene-LDO09_RS02095;Name=LDO09_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02095;old_locus_tag=TthAA11_04050 NZ_AP024926.1 Protein Homology CDS 376294 378102 . + 0 ID=cds-WP_143584691.1;Parent=gene-LDO09_RS02095;Dbxref=Genbank:WP_143584691.1;Name=WP_143584691.1;Ontology_term=GO:0009234,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631577.1;locus_tag=LDO09_RS02095;product=menaquinone biosynthesis decarboxylase;protein_id=WP_143584691.1;transl_table=11 NZ_AP024926.1 RefSeq gene 378140 378790 . + . ID=gene-LDO09_RS02100;Name=LDO09_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02100;old_locus_tag=TthAA11_04060 NZ_AP024926.1 Protein Homology CDS 378140 378790 . + 0 ID=cds-WP_008631587.1;Parent=gene-LDO09_RS02100;Dbxref=Genbank:WP_008631587.1;Name=WP_008631587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631587.1;locus_tag=LDO09_RS02100;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_008631587.1;transl_table=11 NZ_AP024926.1 RefSeq gene 378937 379485 . - . ID=gene-LDO09_RS02105;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LDO09_RS02105;old_locus_tag=TthAA11_04070 NZ_AP024926.1 Protein Homology CDS 378937 379485 . - 0 ID=cds-WP_143584694.1;Parent=gene-LDO09_RS02105;Dbxref=Genbank:WP_143584694.1;Name=WP_143584694.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227889.1;locus_tag=LDO09_RS02105;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_143584694.1;transl_table=11 NZ_AP024926.1 RefSeq gene 379517 380713 . + . ID=gene-LDO09_RS02110;Name=LDO09_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02110;old_locus_tag=TthAA11_04080 NZ_AP024926.1 Protein Homology CDS 379517 380713 . + 0 ID=cds-WP_143584696.1;Parent=gene-LDO09_RS02110;Dbxref=Genbank:WP_143584696.1;Name=WP_143584696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630140.1;locus_tag=LDO09_RS02110;product=sugar ABC transporter permease;protein_id=WP_143584696.1;transl_table=11 NZ_AP024926.1 RefSeq gene 380763 381896 . + . ID=gene-LDO09_RS02115;Name=LDO09_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02115;old_locus_tag=TthAA11_04090 NZ_AP024926.1 Protein Homology CDS 380763 381896 . + 0 ID=cds-WP_172619224.1;Parent=gene-LDO09_RS02115;Dbxref=Genbank:WP_172619224.1;Name=WP_172619224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630139.1;locus_tag=LDO09_RS02115;product=carbohydrate ABC transporter permease;protein_id=WP_172619224.1;transl_table=11 NZ_AP024926.1 RefSeq gene 381952 383205 . + . ID=gene-LDO09_RS02120;Name=LDO09_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02120;old_locus_tag=TthAA11_04100 NZ_AP024926.1 Protein Homology CDS 381952 383205 . + 0 ID=cds-WP_143584697.1;Parent=gene-LDO09_RS02120;Dbxref=Genbank:WP_143584697.1;Name=WP_143584697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227893.1;locus_tag=LDO09_RS02120;product=ABC transporter substrate-binding protein;protein_id=WP_143584697.1;transl_table=11 NZ_AP024926.1 RefSeq gene 383267 385129 . + . ID=gene-LDO09_RS02125;Name=LDO09_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02125;old_locus_tag=TthAA11_04110 NZ_AP024926.1 Protein Homology CDS 383267 385129 . + 0 ID=cds-WP_143584699.1;Parent=gene-LDO09_RS02125;Dbxref=Genbank:WP_143584699.1;Name=WP_143584699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046084.1;locus_tag=LDO09_RS02125;product=aldehyde ferredoxin oxidoreductase family protein;protein_id=WP_143584699.1;transl_table=11 NZ_AP024926.1 RefSeq gene 385100 385774 . - . ID=gene-LDO09_RS02130;Name=LDO09_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02130;old_locus_tag=TthAA11_04120 NZ_AP024926.1 Protein Homology CDS 385100 385774 . - 0 ID=cds-WP_041444454.1;Parent=gene-LDO09_RS02130;Dbxref=Genbank:WP_041444454.1;Name=WP_041444454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329853.1;locus_tag=LDO09_RS02130;product=DUF58 domain-containing protein;protein_id=WP_041444454.1;transl_table=11 NZ_AP024926.1 RefSeq gene 385838 386314 . + . ID=gene-LDO09_RS02135;Name=LDO09_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02135;old_locus_tag=TthAA11_04130 NZ_AP024926.1 Protein Homology CDS 385838 386314 . + 0 ID=cds-WP_014630135.1;Parent=gene-LDO09_RS02135;Dbxref=Genbank:WP_014630135.1;Name=WP_014630135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509900.1;locus_tag=LDO09_RS02135;product=DUF456 family protein;protein_id=WP_014630135.1;transl_table=11 NZ_AP024926.1 RefSeq gene 386318 386575 . + . ID=gene-LDO09_RS02140;Name=LDO09_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02140;old_locus_tag=TthAA11_04140 NZ_AP024926.1 Protein Homology CDS 386318 386575 . + 0 ID=cds-WP_008631601.1;Parent=gene-LDO09_RS02140;Dbxref=Genbank:WP_008631601.1;Name=WP_008631601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631601.1;locus_tag=LDO09_RS02140;product=glutaredoxin family protein;protein_id=WP_008631601.1;transl_table=11 NZ_AP024926.1 RefSeq gene 386575 387414 . + . ID=gene-LDO09_RS02145;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LDO09_RS02145;old_locus_tag=TthAA11_04150 NZ_AP024926.1 Protein Homology CDS 386575 387414 . + 0 ID=cds-WP_143586909.1;Parent=gene-LDO09_RS02145;Dbxref=Genbank:WP_143586909.1;Name=WP_143586909.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227898.1;locus_tag=LDO09_RS02145;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_143586909.1;transl_table=11 NZ_AP024926.1 RefSeq gene 387425 388786 . + . ID=gene-LDO09_RS02150;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LDO09_RS02150;old_locus_tag=TthAA11_04160 NZ_AP024926.1 Protein Homology CDS 387425 388786 . + 0 ID=cds-WP_172619158.1;Parent=gene-LDO09_RS02150;Dbxref=Genbank:WP_172619158.1;Name=WP_172619158.1;Ontology_term=GO:0009103,GO:0009252,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630133.1;locus_tag=LDO09_RS02150;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_172619158.1;transl_table=11 NZ_AP024926.1 RefSeq gene 388831 389052 . + . ID=gene-LDO09_RS02155;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=LDO09_RS02155;old_locus_tag=TthAA11_04170 NZ_AP024926.1 Protein Homology CDS 388831 389052 . + 0 ID=cds-WP_014630132.1;Parent=gene-LDO09_RS02155;Dbxref=Genbank:WP_014630132.1;Name=WP_014630132.1;Ontology_term=GO:0015628;gbkey=CDS;gene=tatA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631606.1;locus_tag=LDO09_RS02155;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_014630132.1;transl_table=11 NZ_AP024926.1 RefSeq gene 389049 389789 . + . ID=gene-LDO09_RS02160;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LDO09_RS02160;old_locus_tag=TthAA11_04180 NZ_AP024926.1 Protein Homology CDS 389049 389789 . + 0 ID=cds-WP_014630131.1;Parent=gene-LDO09_RS02160;Dbxref=Genbank:WP_014630131.1;Name=WP_014630131.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227900.1;locus_tag=LDO09_RS02160;product=twin-arginine translocase subunit TatC;protein_id=WP_014630131.1;transl_table=11 NZ_AP024926.1 RefSeq gene 389823 390890 . + . ID=gene-LDO09_RS02165;Name=LDO09_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02165;old_locus_tag=TthAA11_04190 NZ_AP024926.1 Protein Homology CDS 389823 390890 . + 0 ID=cds-WP_143584702.1;Parent=gene-LDO09_RS02165;Dbxref=Genbank:WP_143584702.1;Name=WP_143584702.1;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509903.1;locus_tag=LDO09_RS02165;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;protein_id=WP_143584702.1;transl_table=11 NZ_AP024926.1 RefSeq gene 390893 391840 . + . ID=gene-LDO09_RS02170;Name=LDO09_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02170;old_locus_tag=TthAA11_04200 NZ_AP024926.1 Protein Homology CDS 390893 391840 . + 0 ID=cds-WP_143584704.1;Parent=gene-LDO09_RS02170;Dbxref=Genbank:WP_143584704.1;Name=WP_143584704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227902.1;locus_tag=LDO09_RS02170;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_143584704.1;transl_table=11 NZ_AP024926.1 RefSeq gene 391865 393502 . + . ID=gene-LDO09_RS02175;Name=LDO09_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02175;old_locus_tag=TthAA11_04210 NZ_AP024926.1 Protein Homology CDS 391865 393502 . + 0 ID=cds-WP_143584705.1;Parent=gene-LDO09_RS02175;Dbxref=Genbank:WP_143584705.1;Name=WP_143584705.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461407.1;locus_tag=LDO09_RS02175;product=FAD-binding dehydrogenase;protein_id=WP_143584705.1;transl_table=11 NZ_AP024926.1 RefSeq gene 393507 393914 . + . ID=gene-LDO09_RS02180;Name=mce;gbkey=Gene;gene=mce;gene_biotype=protein_coding;locus_tag=LDO09_RS02180;old_locus_tag=TthAA11_04220 NZ_AP024926.1 Protein Homology CDS 393507 393914 . + 0 ID=cds-WP_143584707.1;Parent=gene-LDO09_RS02180;Dbxref=Genbank:WP_143584707.1;Name=WP_143584707.1;gbkey=CDS;gene=mce;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013014597.1;locus_tag=LDO09_RS02180;product=methylmalonyl-CoA epimerase;protein_id=WP_143584707.1;transl_table=11 NZ_AP024926.1 RefSeq gene 394030 395613 . + . ID=gene-LDO09_RS02185;Name=LDO09_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02185;old_locus_tag=TthAA11_04230 NZ_AP024926.1 Protein Homology CDS 394030 395613 . + 0 ID=cds-WP_223968848.1;Parent=gene-LDO09_RS02185;Dbxref=Genbank:WP_223968848.1;Name=WP_223968848.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630183.1;locus_tag=LDO09_RS02185;product=IS200/IS605 family accessory protein TnpB-related protein;protein_id=WP_223968848.1;transl_table=11 NZ_AP024926.1 RefSeq gene 395623 395961 . + . ID=gene-LDO09_RS02190;Name=LDO09_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02190;old_locus_tag=TthAA11_04240 NZ_AP024926.1 Protein Homology CDS 395623 395961 . + 0 ID=cds-WP_014630126.1;Parent=gene-LDO09_RS02190;Dbxref=Genbank:WP_014630126.1;Name=WP_014630126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172483.1;locus_tag=LDO09_RS02190;product=VanZ family protein;protein_id=WP_014630126.1;transl_table=11 NZ_AP024926.1 RefSeq gene 395915 396598 . - . ID=gene-LDO09_RS02195;Name=LDO09_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02195;old_locus_tag=TthAA11_04250 NZ_AP024926.1 Protein Homology CDS 395915 396598 . - 0 ID=cds-WP_143584713.1;Parent=gene-LDO09_RS02195;Dbxref=Genbank:WP_143584713.1;Name=WP_143584713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631622.1;locus_tag=LDO09_RS02195;product=SDR family oxidoreductase;protein_id=WP_143584713.1;transl_table=11 NZ_AP024926.1 RefSeq gene 396603 397592 . - . ID=gene-LDO09_RS02200;Name=LDO09_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02200;old_locus_tag=TthAA11_04260 NZ_AP024926.1 Protein Homology CDS 396603 397592 . - 0 ID=cds-WP_223968850.1;Parent=gene-LDO09_RS02200;Dbxref=Genbank:WP_223968850.1;Name=WP_223968850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172485.1;locus_tag=LDO09_RS02200;product=hypothetical protein;protein_id=WP_223968850.1;transl_table=11 NZ_AP024926.1 RefSeq gene 397589 400063 . - . ID=gene-LDO09_RS02205;Name=LDO09_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02205;old_locus_tag=TthAA11_04270 NZ_AP024926.1 Protein Homology CDS 397589 400063 . - 0 ID=cds-WP_223968852.1;Parent=gene-LDO09_RS02205;Dbxref=Genbank:WP_223968852.1;Name=WP_223968852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227908.1;locus_tag=LDO09_RS02205;product=LPS-assembly protein LptD;protein_id=WP_223968852.1;transl_table=11 NZ_AP024926.1 RefSeq gene 400060 401103 . - . ID=gene-LDO09_RS02210;Name=LDO09_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02210;old_locus_tag=TthAA11_04280 NZ_AP024926.1 Protein Homology CDS 400060 401103 . - 0 ID=cds-WP_143584719.1;Parent=gene-LDO09_RS02210;Dbxref=Genbank:WP_143584719.1;Name=WP_143584719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227909.1;locus_tag=LDO09_RS02210;product=LptF/LptG family permease;protein_id=WP_143584719.1;transl_table=11 NZ_AP024926.1 RefSeq gene 401100 402110 . - . ID=gene-LDO09_RS02215;Name=LDO09_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02215;old_locus_tag=TthAA11_04290 NZ_AP024926.1 Protein Homology CDS 401100 402110 . - 0 ID=cds-WP_008631628.1;Parent=gene-LDO09_RS02215;Dbxref=Genbank:WP_008631628.1;Name=WP_008631628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172488.1;locus_tag=LDO09_RS02215;product=LptF/LptG family permease;protein_id=WP_008631628.1;transl_table=11 NZ_AP024926.1 RefSeq gene 402166 402582 . - . ID=gene-LDO09_RS02220;Name=LDO09_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02220;old_locus_tag=TthAA11_04300 NZ_AP024926.1 Protein Homology CDS 402166 402582 . - 0 ID=cds-WP_143584721.1;Parent=gene-LDO09_RS02220;Dbxref=Genbank:WP_143584721.1;Name=WP_143584721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630120.1;locus_tag=LDO09_RS02220;product=hypothetical protein;protein_id=WP_143584721.1;transl_table=11 NZ_AP024926.1 RefSeq gene 402750 403784 . - . ID=gene-LDO09_RS02225;Name=LDO09_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02225;old_locus_tag=TthAA11_04310 NZ_AP024926.1 Protein Homology CDS 402750 403784 . - 0 ID=cds-WP_143584723.1;Parent=gene-LDO09_RS02225;Dbxref=Genbank:WP_143584723.1;Name=WP_143584723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003047599.1;locus_tag=LDO09_RS02225;product=alcohol dehydrogenase family protein;protein_id=WP_143584723.1;transl_table=11 NZ_AP024926.1 RefSeq gene 403781 404173 . - . ID=gene-LDO09_RS02230;Name=LDO09_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02230;old_locus_tag=TthAA11_04320 NZ_AP024926.1 Protein Homology CDS 403781 404173 . - 0 ID=cds-WP_011172491.1;Parent=gene-LDO09_RS02230;Dbxref=Genbank:WP_011172491.1;Name=WP_011172491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718138.1;locus_tag=LDO09_RS02230;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_011172491.1;transl_table=11 NZ_AP024926.1 RefSeq gene 404219 404647 . + . ID=gene-LDO09_RS02235;Name=LDO09_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02235;old_locus_tag=TthAA11_04330 NZ_AP024926.1 Protein Homology CDS 404219 404647 . + 0 ID=cds-WP_011227910.1;Parent=gene-LDO09_RS02235;Dbxref=Genbank:WP_011227910.1;Name=WP_011227910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630118.1;locus_tag=LDO09_RS02235;product=hypothetical protein;protein_id=WP_011227910.1;transl_table=11 NZ_AP024926.1 RefSeq gene 404633 406489 . - . ID=gene-LDO09_RS02240;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LDO09_RS02240;old_locus_tag=TthAA11_04340 NZ_AP024926.1 Protein Homology CDS 404633 406489 . - 0 ID=cds-WP_143584724.1;Parent=gene-LDO09_RS02240;Dbxref=Genbank:WP_143584724.1;Name=WP_143584724.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172493.1;locus_tag=LDO09_RS02240;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_143584724.1;transl_table=11 NZ_AP024926.1 RefSeq gene 406562 407914 . + . ID=gene-LDO09_RS02245;Name=LDO09_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02245;old_locus_tag=TthAA11_04350 NZ_AP024926.1 Protein Homology CDS 406562 407914 . + 0 ID=cds-WP_014630116.1;Parent=gene-LDO09_RS02245;Dbxref=Genbank:WP_014630116.1;Name=WP_014630116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631640.1;locus_tag=LDO09_RS02245;product=tetratricopeptide repeat protein;protein_id=WP_014630116.1;transl_table=11 NZ_AP024926.1 RefSeq gene 407935 408966 . - . ID=gene-LDO09_RS02250;Name=LDO09_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02250;old_locus_tag=TthAA11_04360 NZ_AP024926.1 Protein Homology CDS 407935 408966 . - 0 ID=cds-WP_143584725.1;Parent=gene-LDO09_RS02250;Dbxref=Genbank:WP_143584725.1;Name=WP_143584725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630115.1;locus_tag=LDO09_RS02250;product=DUF4388 domain-containing protein;protein_id=WP_143584725.1;transl_table=11 NZ_AP024926.1 RefSeq gene 408963 409937 . - . ID=gene-LDO09_RS02255;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LDO09_RS02255;old_locus_tag=TthAA11_04370 NZ_AP024926.1 Protein Homology CDS 408963 409937 . - 0 ID=cds-WP_024119065.1;Parent=gene-LDO09_RS02255;Dbxref=Genbank:WP_024119065.1;Name=WP_024119065.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509911.1;locus_tag=LDO09_RS02255;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_024119065.1;transl_table=11 NZ_AP024926.1 RefSeq gene 409963 410748 . + . ID=gene-LDO09_RS02260;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LDO09_RS02260;old_locus_tag=TthAA11_04380 NZ_AP024926.1 Protein Homology CDS 409963 410748 . + 0 ID=cds-WP_008631646.1;Parent=gene-LDO09_RS02260;Dbxref=Genbank:WP_008631646.1;Name=WP_008631646.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717791.1;locus_tag=LDO09_RS02260;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_008631646.1;transl_table=11 NZ_AP024926.1 RefSeq gene 410795 411721 . + . ID=gene-LDO09_RS02265;Name=LDO09_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02265;old_locus_tag=TthAA11_04390 NZ_AP024926.1 Protein Homology CDS 410795 411721 . + 0 ID=cds-WP_143584727.1;Parent=gene-LDO09_RS02265;Dbxref=Genbank:WP_143584727.1;Name=WP_143584727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631648.1;locus_tag=LDO09_RS02265;product=RluA family pseudouridine synthase;protein_id=WP_143584727.1;transl_table=11 NZ_AP024926.1 RefSeq gene 411718 412611 . + . ID=gene-LDO09_RS02270;Name=LDO09_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02270;old_locus_tag=TthAA11_04400 NZ_AP024926.1 Protein Homology CDS 411718 412611 . + 0 ID=cds-WP_143584728.1;Parent=gene-LDO09_RS02270;Dbxref=Genbank:WP_143584728.1;Name=WP_143584728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227916.1;locus_tag=LDO09_RS02270;product=site-specific DNA-methyltransferase;protein_id=WP_143584728.1;transl_table=11 NZ_AP024926.1 RefSeq gene 412586 413263 . + . ID=gene-LDO09_RS02275;Name=LDO09_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02275;old_locus_tag=TthAA11_04410 NZ_AP024926.1 Protein Homology CDS 412586 413263 . + 0 ID=cds-WP_172619159.1;Parent=gene-LDO09_RS02275;Dbxref=Genbank:WP_172619159.1;Name=WP_172619159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509912.1;locus_tag=LDO09_RS02275;product=hypothetical protein;protein_id=WP_172619159.1;transl_table=11 NZ_AP024926.1 RefSeq gene 413249 414442 . - . ID=gene-LDO09_RS02280;Name=lysN;gbkey=Gene;gene=lysN;gene_biotype=protein_coding;locus_tag=LDO09_RS02280;old_locus_tag=TthAA11_04420 NZ_AP024926.1 Protein Homology CDS 413249 414442 . - 0 ID=cds-WP_143584730.1;Parent=gene-LDO09_RS02280;Dbxref=Genbank:WP_143584730.1;Name=WP_143584730.1;gbkey=CDS;gene=lysN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172501.1;locus_tag=LDO09_RS02280;product=2-aminoadipate transaminase;protein_id=WP_143584730.1;transl_table=11 NZ_AP024926.1 RefSeq gene 414538 415668 . - . ID=gene-LDO09_RS02285;Name=LDO09_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02285;old_locus_tag=TthAA11_04430 NZ_AP024926.1 Protein Homology CDS 414538 415668 . - 0 ID=cds-WP_011227919.1;Parent=gene-LDO09_RS02285;Dbxref=Genbank:WP_011227919.1;Name=WP_011227919.1;Ontology_term=GO:0016793;gbkey=CDS;go_function=triphosphoric monoester hydrolase activity|0016793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227919.1;locus_tag=LDO09_RS02285;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_011227919.1;transl_table=11 NZ_AP024926.1 RefSeq gene 415668 416894 . - . ID=gene-LDO09_RS02290;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LDO09_RS02290;old_locus_tag=TthAA11_04440 NZ_AP024926.1 Protein Homology CDS 415668 416894 . - 0 ID=cds-WP_223968854.1;Parent=gene-LDO09_RS02290;Dbxref=Genbank:WP_223968854.1;Name=WP_223968854.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630109.1;locus_tag=LDO09_RS02290;product=beta-ketoacyl-ACP synthase II;protein_id=WP_223968854.1;transl_table=11 NZ_AP024926.1 RefSeq gene 417015 417257 . - . ID=gene-LDO09_RS02295;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LDO09_RS02295;old_locus_tag=TthAA11_04450 NZ_AP024926.1 Protein Homology CDS 417015 417257 . - 0 ID=cds-WP_008631656.1;Parent=gene-LDO09_RS02295;Dbxref=Genbank:WP_008631656.1;Name=WP_008631656.1;Ontology_term=GO:0006633,GO:0000036;gbkey=CDS;gene=acpP;go_function=acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716498.1;locus_tag=LDO09_RS02295;product=acyl carrier protein;protein_id=WP_008631656.1;transl_table=11 NZ_AP024926.1 RefSeq gene 417290 418027 . - . ID=gene-LDO09_RS02300;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LDO09_RS02300;old_locus_tag=TthAA11_04460 NZ_AP024926.1 Protein Homology CDS 417290 418027 . - 0 ID=cds-WP_143584732.1;Parent=gene-LDO09_RS02300;Dbxref=Genbank:WP_143584732.1;Name=WP_143584732.1;Ontology_term=GO:0006633,GO:0004316;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630108.1;locus_tag=LDO09_RS02300;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_143584732.1;transl_table=11 NZ_AP024926.1 RefSeq gene 418020 418937 . - . ID=gene-LDO09_RS02305;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LDO09_RS02305;old_locus_tag=TthAA11_04470 NZ_AP024926.1 Protein Homology CDS 418020 418937 . - 0 ID=cds-WP_143584734.1;Parent=gene-LDO09_RS02305;Dbxref=Genbank:WP_143584734.1;Name=WP_143584734.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630107.1;locus_tag=LDO09_RS02305;product=ACP S-malonyltransferase;protein_id=WP_143584734.1;transl_table=11 NZ_AP024926.1 RefSeq gene 418937 419905 . - . ID=gene-LDO09_RS02310;Name=LDO09_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02310;old_locus_tag=TthAA11_04480 NZ_AP024926.1 Protein Homology CDS 418937 419905 . - 0 ID=cds-WP_011172506.1;Parent=gene-LDO09_RS02310;Dbxref=Genbank:WP_011172506.1;Name=WP_011172506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716501.1;locus_tag=LDO09_RS02310;product=ketoacyl-ACP synthase III;protein_id=WP_011172506.1;transl_table=11 NZ_AP024926.1 RefSeq gene 420070 420252 . - . ID=gene-LDO09_RS02315;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LDO09_RS02315;old_locus_tag=TthAA11_04490 NZ_AP024926.1 Protein Homology CDS 420070 420252 . - 0 ID=cds-WP_008631660.1;Parent=gene-LDO09_RS02315;Dbxref=Genbank:WP_008631660.1;Name=WP_008631660.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048117.1;locus_tag=LDO09_RS02315;product=50S ribosomal protein L32;protein_id=WP_008631660.1;transl_table=11 NZ_AP024926.1 RefSeq gene 420312 420848 . - . ID=gene-LDO09_RS02320;Name=LDO09_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02320;old_locus_tag=TthAA11_04500 NZ_AP024926.1 Protein Homology CDS 420312 420848 . - 0 ID=cds-WP_143584735.1;Parent=gene-LDO09_RS02320;Dbxref=Genbank:WP_143584735.1;Name=WP_143584735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172508.1;locus_tag=LDO09_RS02320;product=DUF177 domain-containing protein;protein_id=WP_143584735.1;transl_table=11 NZ_AP024926.1 RefSeq gene 420937 421416 . - . ID=gene-LDO09_RS02325;Name=LDO09_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02325;old_locus_tag=TthAA11_04510 NZ_AP024926.1 Protein Homology CDS 420937 421416 . - 0 ID=cds-WP_011172509.1;Parent=gene-LDO09_RS02325;Dbxref=Genbank:WP_011172509.1;Name=WP_011172509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509917.1;locus_tag=LDO09_RS02325;product=flavin reductase family protein;protein_id=WP_011172509.1;transl_table=11 NZ_AP024926.1 RefSeq gene 421440 423326 . - . ID=gene-LDO09_RS02330;Name=LDO09_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02330;old_locus_tag=TthAA11_04520 NZ_AP024926.1 Protein Homology CDS 421440 423326 . - 0 ID=cds-WP_143584737.1;Parent=gene-LDO09_RS02330;Dbxref=Genbank:WP_143584737.1;Name=WP_143584737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631666.1;locus_tag=LDO09_RS02330;product=hypothetical protein;protein_id=WP_143584737.1;transl_table=11 NZ_AP024926.1 RefSeq gene 423336 424040 . - . ID=gene-LDO09_RS02335;Name=LDO09_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02335;old_locus_tag=TthAA11_04530 NZ_AP024926.1 Protein Homology CDS 423336 424040 . - 0 ID=cds-WP_143584738.1;Parent=gene-LDO09_RS02335;Dbxref=Genbank:WP_143584738.1;Name=WP_143584738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631668.1;locus_tag=LDO09_RS02335;product=WecB/TagA/CpsF family glycosyltransferase;protein_id=WP_143584738.1;transl_table=11 NZ_AP024926.1 RefSeq gene 424028 424744 . - . ID=gene-LDO09_RS02340;Name=LDO09_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02340;old_locus_tag=TthAA11_04540 NZ_AP024926.1 Protein Homology CDS 424028 424744 . - 0 ID=cds-WP_143584740.1;Parent=gene-LDO09_RS02340;Dbxref=Genbank:WP_143584740.1;Name=WP_143584740.1;Ontology_term=GO:0000287,GO:0050532;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,2-phosphosulfolactate phosphatase activity|0050532||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630102.1;locus_tag=LDO09_RS02340;product=2-phosphosulfolactate phosphatase;protein_id=WP_143584740.1;transl_table=11 NZ_AP024926.1 RefSeq gene 424772 425707 . + . ID=gene-LDO09_RS02345;Name=LDO09_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02345;old_locus_tag=TthAA11_04550 NZ_AP024926.1 Protein Homology CDS 424772 425707 . + 0 ID=cds-WP_143584741.1;Parent=gene-LDO09_RS02345;Dbxref=Genbank:WP_143584741.1;Name=WP_143584741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227924.1;locus_tag=LDO09_RS02345;product=thiamine-phosphate kinase;protein_id=WP_143584741.1;transl_table=11 NZ_AP024926.1 RefSeq gene 425844 426461 . + . ID=gene-LDO09_RS02350;Name=nox;gbkey=Gene;gene=nox;gene_biotype=protein_coding;locus_tag=LDO09_RS02350;old_locus_tag=TthAA11_04560 NZ_AP024926.1 Protein Homology CDS 425844 426461 . + 0 ID=cds-WP_011227925.1;Parent=gene-LDO09_RS02350;Dbxref=Genbank:WP_011227925.1;Name=WP_011227925.1;gbkey=CDS;gene=nox;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227925.1;locus_tag=LDO09_RS02350;product=NADH dehydrogenase;protein_id=WP_011227925.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 426458 426843 . - . ID=gene-LDO09_RS12065;Name=LDO09_RS12065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS12065;pseudo=true NZ_AP024926.1 Protein Homology CDS 426458 426843 . - 0 ID=cds-LDO09_RS12065;Parent=gene-LDO09_RS12065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172515.1;locus_tag=LDO09_RS12065;product=nucleotidyltransferase domain-containing protein;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 426800 427179 . - . ID=gene-LDO09_RS02365;Name=LDO09_RS02365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS02365;old_locus_tag=TthAA11_04590;pseudo=true NZ_AP024926.1 Protein Homology CDS 426800 427179 . - 0 ID=cds-LDO09_RS02365;Parent=gene-LDO09_RS02365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551403.1;locus_tag=LDO09_RS02365;product=HEPN domain-containing protein;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 427208 428251 . + . ID=gene-LDO09_RS02370;Name=LDO09_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02370;old_locus_tag=TthAA11_04600 NZ_AP024926.1 Protein Homology CDS 427208 428251 . + 0 ID=cds-WP_014630098.1;Parent=gene-LDO09_RS02370;Dbxref=Genbank:WP_014630098.1;Name=WP_014630098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172517.1;locus_tag=LDO09_RS02370;product=histidinol-phosphate transaminase;protein_id=WP_014630098.1;transl_table=11 NZ_AP024926.1 RefSeq gene 428244 428828 . + . ID=gene-LDO09_RS02375;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=LDO09_RS02375;old_locus_tag=TthAA11_04610 NZ_AP024926.1 Protein Homology CDS 428244 428828 . + 0 ID=cds-WP_014630097.1;Parent=gene-LDO09_RS02375;Dbxref=Genbank:WP_014630097.1;Name=WP_014630097.1;gbkey=CDS;gene=hisB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046146.1;locus_tag=LDO09_RS02375;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_014630097.1;transl_table=11 NZ_AP024926.1 RefSeq gene 428944 429540 . + . ID=gene-LDO09_RS02380;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=LDO09_RS02380;old_locus_tag=TthAA11_04620 NZ_AP024926.1 Protein Homology CDS 428944 429540 . + 0 ID=cds-WP_014630096.1;Parent=gene-LDO09_RS02380;Dbxref=Genbank:WP_014630096.1;Name=WP_014630096.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630096.1;locus_tag=LDO09_RS02380;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_014630096.1;transl_table=11 NZ_AP024926.1 RefSeq gene 429511 430431 . - . ID=gene-LDO09_RS02385;Name=LDO09_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02385;old_locus_tag=TthAA11_04630 NZ_AP024926.1 Protein Homology CDS 429511 430431 . - 0 ID=cds-WP_124104918.1;Parent=gene-LDO09_RS02385;Dbxref=Genbank:WP_124104918.1;Name=WP_124104918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111750.1;locus_tag=LDO09_RS02385;product=carbohydrate kinase family protein;protein_id=WP_124104918.1;transl_table=11 NZ_AP024926.1 RefSeq gene 430576 432057 . + . ID=gene-LDO09_RS02390;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LDO09_RS02390;old_locus_tag=TthAA11_04640 NZ_AP024926.1 Protein Homology CDS 430576 432057 . + 0 ID=cds-WP_223968857.1;Parent=gene-LDO09_RS02390;Dbxref=Genbank:WP_223968857.1;Name=WP_223968857.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003049437.1;locus_tag=LDO09_RS02390;product=IMP dehydrogenase;protein_id=WP_223968857.1;transl_table=11 NZ_AP024926.1 RefSeq gene 432063 432293 . - . ID=gene-LDO09_RS02395;Name=LDO09_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02395;old_locus_tag=TthAA11_04650 NZ_AP024926.1 Protein Homology CDS 432063 432293 . - 0 ID=cds-WP_011172522.1;Parent=gene-LDO09_RS02395;Dbxref=Genbank:WP_011172522.1;Name=WP_011172522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172522.1;locus_tag=LDO09_RS02395;product=hypothetical protein;protein_id=WP_011172522.1;transl_table=11 NZ_AP024926.1 RefSeq gene 432334 432819 . + . ID=gene-LDO09_RS02400;Name=LDO09_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02400;old_locus_tag=TthAA11_04660 NZ_AP024926.1 Protein Homology CDS 432334 432819 . + 0 ID=cds-WP_143584744.1;Parent=gene-LDO09_RS02400;Dbxref=Genbank:WP_143584744.1;Name=WP_143584744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509925.1;locus_tag=LDO09_RS02400;product=hypothetical protein;protein_id=WP_143584744.1;transl_table=11 NZ_AP024926.1 RefSeq gene 432764 433189 . - . ID=gene-LDO09_RS02405;Name=LDO09_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02405;old_locus_tag=TthAA11_04670 NZ_AP024926.1 Protein Homology CDS 432764 433189 . - 0 ID=cds-WP_143584746.1;Parent=gene-LDO09_RS02405;Dbxref=Genbank:WP_143584746.1;Name=WP_143584746.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172524.1;locus_tag=LDO09_RS02405;product=disulfide bond formation protein B;protein_id=WP_143584746.1;transl_table=11 NZ_AP024926.1 RefSeq gene 433233 434453 . + . ID=gene-LDO09_RS02410;Name=LDO09_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02410;old_locus_tag=TthAA11_04680 NZ_AP024926.1 Protein Homology CDS 433233 434453 . + 0 ID=cds-WP_143584747.1;Parent=gene-LDO09_RS02410;Dbxref=Genbank:WP_143584747.1;Name=WP_143584747.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717007.1;locus_tag=LDO09_RS02410;product=Nramp family divalent metal transporter;protein_id=WP_143584747.1;transl_table=11 NZ_AP024926.1 RefSeq gene 434507 435421 . - . ID=gene-LDO09_RS02415;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LDO09_RS02415;old_locus_tag=TthAA11_04690 NZ_AP024926.1 Protein Homology CDS 434507 435421 . - 0 ID=cds-WP_143584748.1;Parent=gene-LDO09_RS02415;Dbxref=Genbank:WP_143584748.1;Name=WP_143584748.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227933.1;locus_tag=LDO09_RS02415;product=signal recognition particle-docking protein FtsY;protein_id=WP_143584748.1;transl_table=11 NZ_AP024926.1 RefSeq gene 435421 435861 . - . ID=gene-LDO09_RS02420;Name=LDO09_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02420;old_locus_tag=TthAA11_04700 NZ_AP024926.1 Protein Homology CDS 435421 435861 . - 0 ID=cds-WP_143584750.1;Parent=gene-LDO09_RS02420;Dbxref=Genbank:WP_143584750.1;Name=WP_143584750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631688.1;locus_tag=LDO09_RS02420;product=hypothetical protein;protein_id=WP_143584750.1;transl_table=11 NZ_AP024926.1 RefSeq gene 435878 437284 . - . ID=gene-LDO09_RS02425;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LDO09_RS02425;old_locus_tag=TthAA11_04710 NZ_AP024926.1 Protein Homology CDS 435878 437284 . - 0 ID=cds-WP_143584751.1;Parent=gene-LDO09_RS02425;Dbxref=Genbank:WP_143584751.1;Name=WP_143584751.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227935.1;locus_tag=LDO09_RS02425;product=glutamate--tRNA ligase;protein_id=WP_143584751.1;transl_table=11 NZ_AP024926.1 RefSeq gene 437339 438067 . + . ID=gene-LDO09_RS02430;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LDO09_RS02430;old_locus_tag=TthAA11_04720 NZ_AP024926.1 Protein Homology CDS 437339 438067 . + 0 ID=cds-WP_014630089.1;Parent=gene-LDO09_RS02430;Dbxref=Genbank:WP_014630089.1;Name=WP_014630089.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0009898,GO:0043190;gbkey=CDS;gene=lptB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048086.1;locus_tag=LDO09_RS02430;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_014630089.1;transl_table=11 NZ_AP024926.1 RefSeq gene 438070 439413 . + . ID=gene-LDO09_RS02435;Name=LDO09_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02435;old_locus_tag=TthAA11_04730 NZ_AP024926.1 Protein Homology CDS 438070 439413 . + 0 ID=cds-WP_143584753.1;Parent=gene-LDO09_RS02435;Dbxref=Genbank:WP_143584753.1;Name=WP_143584753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630088.1;locus_tag=LDO09_RS02435;product=DUF3084 domain-containing protein;protein_id=WP_143584753.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 439438 440208 . - . ID=gene-LDO09_RS02440;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=pseudogene;locus_tag=LDO09_RS02440;partial=true;pseudo=true;start_range=.,439438 NZ_AP024926.1 Protein Homology CDS 439438 440208 . - 0 ID=cds-LDO09_RS02440;Parent=gene-LDO09_RS02440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: protein motif:HMM:TIGR00536.1;locus_tag=LDO09_RS02440;partial=true;product=peptide chain release factor N(5)-glutamine methyltransferase;pseudo=true;start_range=.,439438;transl_table=11 NZ_AP024926.1 RefSeq gene 440221 440790 . - . ID=gene-LDO09_RS02445;Name=LDO09_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02445;old_locus_tag=TthAA11_04740 NZ_AP024926.1 Protein Homology CDS 440221 440790 . - 0 ID=cds-WP_024119325.1;Parent=gene-LDO09_RS02445;Dbxref=Genbank:WP_024119325.1;Name=WP_024119325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227938.1;locus_tag=LDO09_RS02445;product=KH domain-containing protein;protein_id=WP_024119325.1;transl_table=11 NZ_AP024926.1 RefSeq gene 440800 442092 . - . ID=gene-LDO09_RS02450;Name=LDO09_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02450;old_locus_tag=TthAA11_04750 NZ_AP024926.1 Protein Homology CDS 440800 442092 . - 0 ID=cds-WP_143584756.1;Parent=gene-LDO09_RS02450;Dbxref=Genbank:WP_143584756.1;Name=WP_143584756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630085.1;locus_tag=LDO09_RS02450;product=YidC/Oxa1 family membrane protein insertase;protein_id=WP_143584756.1;transl_table=11 NZ_AP024926.1 RefSeq gene 442089 442337 . - . ID=gene-LDO09_RS02455;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LDO09_RS02455;old_locus_tag=TthAA11_04760 NZ_AP024926.1 Protein Homology CDS 442089 442337 . - 0 ID=cds-WP_143584757.1;Parent=gene-LDO09_RS02455;Dbxref=Genbank:WP_143584757.1;Name=WP_143584757.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631695.1;locus_tag=LDO09_RS02455;product=membrane protein insertion efficiency factor YidD;protein_id=WP_143584757.1;transl_table=11 NZ_AP024926.1 RefSeq gene 442342 442713 . - . ID=gene-LDO09_RS02460;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LDO09_RS02460;old_locus_tag=TthAA11_04770 NZ_AP024926.1 Protein Homology CDS 442342 442713 . - 0 ID=cds-WP_081424933.1;Parent=gene-LDO09_RS02460;Dbxref=Genbank:WP_081424933.1;Name=WP_081424933.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: protein motif:HMM:NF013022.2;locus_tag=LDO09_RS02460;product=ribonuclease P protein component;protein_id=WP_081424933.1;transl_table=11 NZ_AP024926.1 RefSeq gene 442680 442829 . - . ID=gene-LDO09_RS02465;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LDO09_RS02465 NZ_AP024926.1 Protein Homology CDS 442680 442829 . - 0 ID=cds-WP_011227941.1;Parent=gene-LDO09_RS02465;Dbxref=Genbank:WP_011227941.1;Name=WP_011227941.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227941.1;locus_tag=LDO09_RS02465;product=50S ribosomal protein L34;protein_id=WP_011227941.1;transl_table=11 NZ_AP024926.1 RefSeq gene 442994 443755 . + . ID=gene-LDO09_RS02470;Name=LDO09_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02470;old_locus_tag=TthAA11_04780 NZ_AP024926.1 Protein Homology CDS 442994 443755 . + 0 ID=cds-WP_143584759.1;Parent=gene-LDO09_RS02470;Dbxref=Genbank:WP_143584759.1;Name=WP_143584759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509932.1;locus_tag=LDO09_RS02470;product=ABC transporter ATP-binding protein;protein_id=WP_143584759.1;transl_table=11 NZ_AP024926.1 RefSeq gene 443752 445686 . + . ID=gene-LDO09_RS02475;Name=LDO09_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02475;old_locus_tag=TthAA11_04790 NZ_AP024926.1 Protein Homology CDS 443752 445686 . + 0 ID=cds-WP_143584761.1;Parent=gene-LDO09_RS02475;Dbxref=Genbank:WP_143584761.1;Name=WP_143584761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227943.1;locus_tag=LDO09_RS02475;product=long-chain fatty acid--CoA ligase;protein_id=WP_143584761.1;transl_table=11 NZ_AP024926.1 RefSeq gene 445683 446576 . + . ID=gene-LDO09_RS02480;Name=LDO09_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02480;old_locus_tag=TthAA11_04800 NZ_AP024926.1 Protein Homology CDS 445683 446576 . + 0 ID=cds-WP_143584763.1;Parent=gene-LDO09_RS02480;Dbxref=Genbank:WP_143584763.1;Name=WP_143584763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716488.1;locus_tag=LDO09_RS02480;product=branched-chain amino acid ABC transporter permease;protein_id=WP_143584763.1;transl_table=11 NZ_AP024926.1 RefSeq gene 446573 447640 . + . ID=gene-LDO09_RS02485;Name=LDO09_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02485;old_locus_tag=TthAA11_04810 NZ_AP024926.1 Protein Homology CDS 446573 447640 . + 0 ID=cds-WP_024119328.1;Parent=gene-LDO09_RS02485;Dbxref=Genbank:WP_024119328.1;Name=WP_024119328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509935.1;locus_tag=LDO09_RS02485;product=branched-chain amino acid ABC transporter permease;protein_id=WP_024119328.1;transl_table=11 NZ_AP024926.1 RefSeq gene 447681 448877 . + . ID=gene-LDO09_RS02490;Name=LDO09_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02490;old_locus_tag=TthAA11_04820 NZ_AP024926.1 Protein Homology CDS 447681 448877 . + 0 ID=cds-WP_172619160.1;Parent=gene-LDO09_RS02490;Dbxref=Genbank:WP_172619160.1;Name=WP_172619160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630079.1;locus_tag=LDO09_RS02490;product=ABC transporter substrate-binding protein;protein_id=WP_172619160.1;transl_table=11 NZ_AP024926.1 RefSeq gene 448922 449755 . + . ID=gene-LDO09_RS02495;Name=LDO09_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02495;old_locus_tag=TthAA11_04830 NZ_AP024926.1 Protein Homology CDS 448922 449755 . + 0 ID=cds-WP_143584767.1;Parent=gene-LDO09_RS02495;Dbxref=Genbank:WP_143584767.1;Name=WP_143584767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227947.1;locus_tag=LDO09_RS02495;product=ABC transporter ATP-binding protein;protein_id=WP_143584767.1;transl_table=11 NZ_AP024926.1 RefSeq gene 449822 450562 . + . ID=gene-LDO09_RS02500;Name=LDO09_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02500;old_locus_tag=TthAA11_04840 NZ_AP024926.1 Protein Homology CDS 449822 450562 . + 0 ID=cds-WP_011227948.1;Parent=gene-LDO09_RS02500;Dbxref=Genbank:WP_011227948.1;Name=WP_011227948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630077.1;locus_tag=LDO09_RS02500;product=ABC transporter ATP-binding protein;protein_id=WP_011227948.1;transl_table=11 NZ_AP024926.1 RefSeq gene 450555 451361 . + . ID=gene-LDO09_RS02505;Name=LDO09_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02505;old_locus_tag=TthAA11_04850 NZ_AP024926.1 Protein Homology CDS 450555 451361 . + 0 ID=cds-WP_011172542.1;Parent=gene-LDO09_RS02505;Dbxref=Genbank:WP_011172542.1;Name=WP_011172542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172542.1;locus_tag=LDO09_RS02505;product=metal ABC transporter permease;protein_id=WP_011172542.1;transl_table=11 NZ_AP024926.1 RefSeq gene 451386 451835 . + . ID=gene-LDO09_RS02510;Name=LDO09_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02510;old_locus_tag=TthAA11_04860 NZ_AP024926.1 Protein Homology CDS 451386 451835 . + 0 ID=cds-WP_011172543.1;Parent=gene-LDO09_RS02510;Dbxref=Genbank:WP_011172543.1;Name=WP_011172543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172543.1;locus_tag=LDO09_RS02510;product=Rrf2 family transcriptional regulator;protein_id=WP_011172543.1;transl_table=11 NZ_AP024926.1 RefSeq gene 451851 452975 . + . ID=gene-LDO09_RS02515;Name=LDO09_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02515;old_locus_tag=TthAA11_04870 NZ_AP024926.1 Protein Homology CDS 451851 452975 . + 0 ID=cds-WP_223968859.1;Parent=gene-LDO09_RS02515;Dbxref=Genbank:WP_223968859.1;Name=WP_223968859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630075.1;locus_tag=LDO09_RS02515;product=cysteine desulfurase family protein;protein_id=WP_223968859.1;transl_table=11 NZ_AP024926.1 RefSeq gene 453008 454291 . + . ID=gene-LDO09_RS02520;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LDO09_RS02520;old_locus_tag=TthAA11_04880 NZ_AP024926.1 Protein Homology CDS 453008 454291 . + 0 ID=cds-WP_143584771.1;Parent=gene-LDO09_RS02520;Dbxref=Genbank:WP_143584771.1;Name=WP_143584771.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227950.1;locus_tag=LDO09_RS02520;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_143584771.1;transl_table=11 NZ_AP024926.1 RefSeq gene 454276 454902 . + . ID=gene-LDO09_RS02525;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LDO09_RS02525;old_locus_tag=TthAA11_04890 NZ_AP024926.1 Protein Homology CDS 454276 454902 . + 0 ID=cds-WP_096410995.1;Parent=gene-LDO09_RS02525;Dbxref=Genbank:WP_096410995.1;Name=WP_096410995.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172546.1;locus_tag=LDO09_RS02525;product=(d)CMP kinase;protein_id=WP_096410995.1;transl_table=11 NZ_AP024926.1 RefSeq gene 454906 455679 . + . ID=gene-LDO09_RS02530;Name=LDO09_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02530;old_locus_tag=TthAA11_04900 NZ_AP024926.1 Protein Homology CDS 454906 455679 . + 0 ID=cds-WP_143584773.1;Parent=gene-LDO09_RS02530;Dbxref=Genbank:WP_143584773.1;Name=WP_143584773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630072.1;locus_tag=LDO09_RS02530;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_143584773.1;transl_table=11 NZ_AP024926.1 RefSeq gene 455643 456053 . + . ID=gene-LDO09_RS02535;Name=LDO09_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02535;old_locus_tag=TthAA11_04910 NZ_AP024926.1 Protein Homology CDS 455643 456053 . + 0 ID=cds-WP_143584775.1;Parent=gene-LDO09_RS02535;Dbxref=Genbank:WP_143584775.1;Name=WP_143584775.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172548.1;locus_tag=LDO09_RS02535;product=NUDIX domain-containing protein;protein_id=WP_143584775.1;transl_table=11 NZ_AP024926.1 RefSeq gene 456050 456754 . + . ID=gene-LDO09_RS02540;Name=tmpR;gbkey=Gene;gene=tmpR;gene_biotype=protein_coding;locus_tag=LDO09_RS02540;old_locus_tag=TthAA11_04920 NZ_AP024926.1 Protein Homology CDS 456050 456754 . + 0 ID=cds-WP_011172549.1;Parent=gene-LDO09_RS02540;Dbxref=Genbank:WP_011172549.1;Name=WP_011172549.1;gbkey=CDS;gene=tmpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003049367.1;locus_tag=LDO09_RS02540;product=bifunctional dihydropteridine reductase/dihydrofolate reductase TmpR;protein_id=WP_011172549.1;transl_table=11 NZ_AP024926.1 RefSeq gene 456820 456895 . - . ID=gene-LDO09_RS02545;Name=LDO09_RS02545;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS02545;old_locus_tag=TthAA11_t00180 NZ_AP024926.1 tRNAscan-SE tRNA 456820 456895 . - . ID=rna-LDO09_RS02545;Parent=gene-LDO09_RS02545;anticodon=(pos:complement(456860..456862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS02545;product=tRNA-Ile NZ_AP024926.1 tRNAscan-SE exon 456820 456895 . - . ID=exon-LDO09_RS02545-1;Parent=rna-LDO09_RS02545;anticodon=(pos:complement(456860..456862));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS02545;product=tRNA-Ile NZ_AP024926.1 RefSeq gene 456965 457156 . + . ID=gene-LDO09_RS02550;Name=LDO09_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02550;old_locus_tag=TthAA11_04930 NZ_AP024926.1 Protein Homology CDS 456965 457156 . + 0 ID=cds-WP_143584777.1;Parent=gene-LDO09_RS02550;Dbxref=Genbank:WP_143584777.1;Name=WP_143584777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631716.1;locus_tag=LDO09_RS02550;product=DUF2892 domain-containing protein;protein_id=WP_143584777.1;transl_table=11 NZ_AP024926.1 RefSeq gene 457153 457683 . + . ID=gene-LDO09_RS02555;Name=LDO09_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02555;old_locus_tag=TthAA11_04940 NZ_AP024926.1 Protein Homology CDS 457153 457683 . + 0 ID=cds-WP_143584779.1;Parent=gene-LDO09_RS02555;Dbxref=Genbank:WP_143584779.1;Name=WP_143584779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631718.1;locus_tag=LDO09_RS02555;product=DUF402 domain-containing protein;protein_id=WP_143584779.1;transl_table=11 NZ_AP024926.1 RefSeq gene 457680 458690 . - . ID=gene-LDO09_RS02560;Name=LDO09_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02560;old_locus_tag=TthAA11_04950 NZ_AP024926.1 Protein Homology CDS 457680 458690 . - 0 ID=cds-WP_143584781.1;Parent=gene-LDO09_RS02560;Dbxref=Genbank:WP_143584781.1;Name=WP_143584781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509944.1;locus_tag=LDO09_RS02560;product=hypothetical protein;protein_id=WP_143584781.1;transl_table=11 NZ_AP024926.1 RefSeq gene 458720 459727 . - . ID=gene-LDO09_RS02565;Name=LDO09_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02565;old_locus_tag=TthAA11_04960 NZ_AP024926.1 Protein Homology CDS 458720 459727 . - 0 ID=cds-WP_011172553.1;Parent=gene-LDO09_RS02565;Dbxref=Genbank:WP_011172553.1;Name=WP_011172553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630066.1;locus_tag=LDO09_RS02565;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_011172553.1;transl_table=11 NZ_AP024926.1 RefSeq gene 459760 460791 . - . ID=gene-LDO09_RS02570;Name=LDO09_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02570;old_locus_tag=TthAA11_04970 NZ_AP024926.1 Protein Homology CDS 459760 460791 . - 0 ID=cds-WP_011227956.1;Parent=gene-LDO09_RS02570;Dbxref=Genbank:WP_011227956.1;Name=WP_011227956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630065.1;locus_tag=LDO09_RS02570;product=zinc-binding dehydrogenase;protein_id=WP_011227956.1;transl_table=11 NZ_AP024926.1 RefSeq gene 460905 462653 . + . ID=gene-LDO09_RS02575;Name=LDO09_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02575;old_locus_tag=TthAA11_04980 NZ_AP024926.1 Protein Homology CDS 460905 462653 . + 0 ID=cds-WP_223965994.1;Parent=gene-LDO09_RS02575;Dbxref=Genbank:WP_223965994.1;Name=WP_223965994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630064.1;locus_tag=LDO09_RS02575;product=ABC transporter substrate-binding protein;protein_id=WP_223965994.1;transl_table=11 NZ_AP024926.1 RefSeq gene 462710 463693 . + . ID=gene-LDO09_RS02580;Name=LDO09_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02580;old_locus_tag=TthAA11_04990 NZ_AP024926.1 Protein Homology CDS 462710 463693 . + 0 ID=cds-WP_172619161.1;Parent=gene-LDO09_RS02580;Dbxref=Genbank:WP_172619161.1;Name=WP_172619161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330030.1;locus_tag=LDO09_RS02580;product=ABC transporter permease;protein_id=WP_172619161.1;transl_table=11 NZ_AP024926.1 RefSeq gene 463701 465047 . + . ID=gene-LDO09_RS02585;Name=LDO09_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02585;old_locus_tag=TthAA11_05000 NZ_AP024926.1 Protein Homology CDS 463701 465047 . + 0 ID=cds-WP_143584787.1;Parent=gene-LDO09_RS02585;Dbxref=Genbank:WP_143584787.1;Name=WP_143584787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509949.1;locus_tag=LDO09_RS02585;product=ABC transporter permease;protein_id=WP_143584787.1;transl_table=11 NZ_AP024926.1 RefSeq gene 465121 466143 . + . ID=gene-LDO09_RS02590;Name=LDO09_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02590;old_locus_tag=TthAA11_05010 NZ_AP024926.1 Protein Homology CDS 465121 466143 . + 0 ID=cds-WP_143584789.1;Parent=gene-LDO09_RS02590;Dbxref=Genbank:WP_143584789.1;Name=WP_143584789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509950.1;locus_tag=LDO09_RS02590;product=ABC transporter ATP-binding protein;protein_id=WP_143584789.1;transl_table=11 NZ_AP024926.1 RefSeq gene 466167 467123 . + . ID=gene-LDO09_RS02595;Name=LDO09_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02595;old_locus_tag=TthAA11_05020 NZ_AP024926.1 Protein Homology CDS 466167 467123 . + 0 ID=cds-WP_231834467.1;Parent=gene-LDO09_RS02595;Dbxref=Genbank:WP_231834467.1;Name=WP_231834467.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018465182.1;locus_tag=LDO09_RS02595;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_231834467.1;transl_table=11 NZ_AP024926.1 RefSeq gene 467182 467808 . + . ID=gene-LDO09_RS02600;Name=LDO09_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02600;old_locus_tag=TthAA11_05030 NZ_AP024926.1 Protein Homology CDS 467182 467808 . + 0 ID=cds-WP_143584791.1;Parent=gene-LDO09_RS02600;Dbxref=Genbank:WP_143584791.1;Name=WP_143584791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516158.1;locus_tag=LDO09_RS02600;product=acetoin utilization AcuB family protein;protein_id=WP_143584791.1;transl_table=11 NZ_AP024926.1 RefSeq gene 467802 468929 . + . ID=gene-LDO09_RS02605;Name=LDO09_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02605;old_locus_tag=TthAA11_05040 NZ_AP024926.1 Protein Homology CDS 467802 468929 . + 0 ID=cds-WP_143584793.1;Parent=gene-LDO09_RS02605;Dbxref=Genbank:WP_143584793.1;Name=WP_143584793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631735.1;locus_tag=LDO09_RS02605;product=acetoin utilization protein AcuC;protein_id=WP_143584793.1;transl_table=11 NZ_AP024926.1 RefSeq gene 468934 469131 . + . ID=gene-LDO09_RS02610;Name=LDO09_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02610;old_locus_tag=TthAA11_05050 NZ_AP024926.1 Protein Homology CDS 468934 469131 . + 0 ID=cds-WP_143584795.1;Parent=gene-LDO09_RS02610;Dbxref=Genbank:WP_143584795.1;Name=WP_143584795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111835.1;locus_tag=LDO09_RS02610;product=MoaD/ThiS family protein;protein_id=WP_143584795.1;transl_table=11 NZ_AP024926.1 RefSeq gene 469133 470095 . + . ID=gene-LDO09_RS02615;Name=LDO09_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02615;old_locus_tag=TthAA11_05060 NZ_AP024926.1 Protein Homology CDS 469133 470095 . + 0 ID=cds-WP_143584796.1;Parent=gene-LDO09_RS02615;Dbxref=Genbank:WP_143584796.1;Name=WP_143584796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631738.1;locus_tag=LDO09_RS02615;product=TIGR00269 family protein;protein_id=WP_143584796.1;transl_table=11 NZ_AP024926.1 RefSeq gene 470111 473008 . - . ID=gene-LDO09_RS02620;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=LDO09_RS02620;old_locus_tag=TthAA11_05070 NZ_AP024926.1 Protein Homology CDS 470111 473008 . - 0 ID=cds-WP_143584799.1;Parent=gene-LDO09_RS02620;Dbxref=Genbank:WP_143584799.1;Name=WP_143584799.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630057.1;locus_tag=LDO09_RS02620;product=maltose alpha-D-glucosyltransferase;protein_id=WP_143584799.1;transl_table=11 NZ_AP024926.1 RefSeq gene 473012 473716 . - . ID=gene-LDO09_RS02625;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=LDO09_RS02625;old_locus_tag=TthAA11_05080 NZ_AP024926.1 Protein Homology CDS 473012 473716 . - 0 ID=cds-WP_143584801.1;Parent=gene-LDO09_RS02625;Dbxref=Genbank:WP_143584801.1;Name=WP_143584801.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227964.1;locus_tag=LDO09_RS02625;product=trehalose-phosphatase;protein_id=WP_143584801.1;transl_table=11 NZ_AP024926.1 RefSeq gene 473713 475062 . - . ID=gene-LDO09_RS02630;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LDO09_RS02630;old_locus_tag=TthAA11_05090 NZ_AP024926.1 Protein Homology CDS 473713 475062 . - 0 ID=cds-WP_143584803.1;Parent=gene-LDO09_RS02630;Dbxref=Genbank:WP_143584803.1;Name=WP_143584803.1;Ontology_term=GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631750.1;locus_tag=LDO09_RS02630;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_143584803.1;transl_table=11 NZ_AP024926.1 RefSeq gene 475279 475569 . + . ID=gene-LDO09_RS02635;Name=LDO09_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02635;old_locus_tag=TthAA11_05100 NZ_AP024926.1 Protein Homology CDS 475279 475569 . + 0 ID=cds-WP_223968861.1;Parent=gene-LDO09_RS02635;Dbxref=Genbank:WP_223968861.1;Name=WP_223968861.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015995.2;locus_tag=LDO09_RS02635;product=hypothetical protein;protein_id=WP_223968861.1;transl_table=11 NZ_AP024926.1 RefSeq gene 475514 476203 . - . ID=gene-LDO09_RS02640;Name=LDO09_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02640;old_locus_tag=TthAA11_05110 NZ_AP024926.1 Protein Homology CDS 475514 476203 . - 0 ID=cds-WP_143584079.1-3;Parent=gene-LDO09_RS02640;Dbxref=Genbank:WP_143584079.1;Name=WP_143584079.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS02640;product=IS5-like element ISTth7 family transposase;protein_id=WP_143584079.1;transl_table=11 NZ_AP024926.1 RefSeq gene 476395 477321 . + . ID=gene-LDO09_RS02645;Name=LDO09_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02645;old_locus_tag=TthAA11_05130 NZ_AP024926.1 Protein Homology CDS 476395 477321 . + 0 ID=cds-WP_223968863.1;Parent=gene-LDO09_RS02645;Dbxref=Genbank:WP_223968863.1;Name=WP_223968863.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015995.2;locus_tag=LDO09_RS02645;product=ABC transporter substrate-binding protein;protein_id=WP_223968863.1;transl_table=11 NZ_AP024926.1 RefSeq gene 477412 478257 . + . ID=gene-LDO09_RS02650;Name=LDO09_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02650;old_locus_tag=TthAA11_05140 NZ_AP024926.1 Protein Homology CDS 477412 478257 . + 0 ID=cds-WP_143584807.1;Parent=gene-LDO09_RS02650;Dbxref=Genbank:WP_143584807.1;Name=WP_143584807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630053.1;locus_tag=LDO09_RS02650;product=proline/glycine betaine ABC transporter permease;protein_id=WP_143584807.1;transl_table=11 NZ_AP024926.1 RefSeq gene 478254 479474 . + . ID=gene-LDO09_RS02655;Name=LDO09_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02655;old_locus_tag=TthAA11_05150 NZ_AP024926.1 Protein Homology CDS 478254 479474 . + 0 ID=cds-WP_143584809.1;Parent=gene-LDO09_RS02655;Dbxref=Genbank:WP_143584809.1;Name=WP_143584809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630052.1;locus_tag=LDO09_RS02655;product=glycine betaine/L-proline ABC transporter ATP-binding protein;protein_id=WP_143584809.1;transl_table=11 NZ_AP024926.1 RefSeq gene 479471 481060 . + . ID=gene-LDO09_RS02660;Name=LDO09_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02660;old_locus_tag=TthAA11_05160 NZ_AP024926.1 Protein Homology CDS 479471 481060 . + 0 ID=cds-WP_143584812.1;Parent=gene-LDO09_RS02660;Dbxref=Genbank:WP_143584812.1;Name=WP_143584812.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630051.1;locus_tag=LDO09_RS02660;product=alpha-amylase family glycosyl hydrolase;protein_id=WP_143584812.1;transl_table=11 NZ_AP024926.1 RefSeq gene 481065 481703 . + . ID=gene-LDO09_RS02665;Name=LDO09_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02665;old_locus_tag=TthAA11_05170 NZ_AP024926.1 Protein Homology CDS 481065 481703 . + 0 ID=cds-WP_143584814.1;Parent=gene-LDO09_RS02665;Dbxref=Genbank:WP_143584814.1;Name=WP_143584814.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631756.1;locus_tag=LDO09_RS02665;product=methyltransferase domain-containing protein;protein_id=WP_143584814.1;transl_table=11 NZ_AP024926.1 RefSeq gene 481694 482443 . + . ID=gene-LDO09_RS02670;Name=LDO09_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02670;old_locus_tag=TthAA11_05180 NZ_AP024926.1 Protein Homology CDS 481694 482443 . + 0 ID=cds-WP_143584817.1;Parent=gene-LDO09_RS02670;Dbxref=Genbank:WP_143584817.1;Name=WP_143584817.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631758.1;locus_tag=LDO09_RS02670;product=methyltransferase domain-containing protein;protein_id=WP_143584817.1;transl_table=11 NZ_AP024926.1 RefSeq gene 482515 482601 . - . ID=gene-LDO09_RS02675;Name=LDO09_RS02675;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS02675;old_locus_tag=TthAA11_t00190 NZ_AP024926.1 tRNAscan-SE tRNA 482515 482601 . - . ID=rna-LDO09_RS02675;Parent=gene-LDO09_RS02675;anticodon=(pos:complement(482565..482567));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS02675;product=tRNA-Leu NZ_AP024926.1 tRNAscan-SE exon 482515 482601 . - . ID=exon-LDO09_RS02675-1;Parent=rna-LDO09_RS02675;anticodon=(pos:complement(482565..482567));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS02675;product=tRNA-Leu NZ_AP024926.1 RefSeq gene 482580 483911 . - . ID=gene-LDO09_RS02680;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=LDO09_RS02680;old_locus_tag=TthAA11_05190 NZ_AP024926.1 Protein Homology CDS 482580 483911 . - 0 ID=cds-WP_172619162.1;Parent=gene-LDO09_RS02680;Dbxref=Genbank:WP_172619162.1;Name=WP_172619162.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550292.1;locus_tag=LDO09_RS02680;product=apolipoprotein N-acyltransferase;protein_id=WP_172619162.1;transl_table=11 NZ_AP024926.1 RefSeq gene 483981 484685 . + . ID=gene-LDO09_RS02685;Name=LDO09_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02685;old_locus_tag=TthAA11_05200 NZ_AP024926.1 Protein Homology CDS 483981 484685 . + 0 ID=cds-WP_143584821.1;Parent=gene-LDO09_RS02685;Dbxref=Genbank:WP_143584821.1;Name=WP_143584821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227969.1;locus_tag=LDO09_RS02685;product=metallophosphoesterase family protein;protein_id=WP_143584821.1;transl_table=11 NZ_AP024926.1 RefSeq gene 484593 485729 . - . ID=gene-LDO09_RS02690;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=LDO09_RS02690;old_locus_tag=TthAA11_05210 NZ_AP024926.1 Protein Homology CDS 484593 485729 . - 0 ID=cds-WP_143584823.1;Parent=gene-LDO09_RS02690;Dbxref=Genbank:WP_143584823.1;Name=WP_143584823.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550294.1;locus_tag=LDO09_RS02690;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_143584823.1;transl_table=11 NZ_AP024926.1 RefSeq gene 485748 486746 . + . ID=gene-LDO09_RS02695;Name=LDO09_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02695;old_locus_tag=TthAA11_05220 NZ_AP024926.1 Protein Homology CDS 485748 486746 . + 0 ID=cds-WP_143584825.1;Parent=gene-LDO09_RS02695;Dbxref=Genbank:WP_143584825.1;Name=WP_143584825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172571.1;locus_tag=LDO09_RS02695;product=homoserine dehydrogenase;protein_id=WP_143584825.1;transl_table=11 NZ_AP024926.1 RefSeq gene 486751 487314 . + . ID=gene-LDO09_RS02700;Name=LDO09_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02700;old_locus_tag=TthAA11_05230 NZ_AP024926.1 Protein Homology CDS 486751 487314 . + 0 ID=cds-WP_143584827.1;Parent=gene-LDO09_RS02700;Dbxref=Genbank:WP_143584827.1;Name=WP_143584827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227973.1;locus_tag=LDO09_RS02700;product=Uma2 family endonuclease;protein_id=WP_143584827.1;transl_table=11 NZ_AP024926.1 RefSeq gene 487346 488401 . + . ID=gene-LDO09_RS02705;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LDO09_RS02705;old_locus_tag=TthAA11_05240 NZ_AP024926.1 Protein Homology CDS 487346 488401 . + 0 ID=cds-WP_143584829.1;Parent=gene-LDO09_RS02705;Dbxref=Genbank:WP_143584829.1;Name=WP_143584829.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631768.1;locus_tag=LDO09_RS02705;product=threonine synthase;protein_id=WP_143584829.1;transl_table=11 NZ_AP024926.1 RefSeq gene 488414 488722 . + . ID=gene-LDO09_RS02710;Name=LDO09_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02710;old_locus_tag=TthAA11_05250 NZ_AP024926.1 Protein Homology CDS 488414 488722 . + 0 ID=cds-WP_014509965.1;Parent=gene-LDO09_RS02710;Dbxref=Genbank:WP_014509965.1;Name=WP_014509965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172574.1;locus_tag=LDO09_RS02710;product=hypothetical protein;protein_id=WP_014509965.1;transl_table=11 NZ_AP024926.1 RefSeq gene 488725 489021 . + . ID=gene-LDO09_RS02715;Name=LDO09_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02715;old_locus_tag=TthAA11_05260 NZ_AP024926.1 Protein Homology CDS 488725 489021 . + 0 ID=cds-WP_014509966.1;Parent=gene-LDO09_RS02715;Dbxref=Genbank:WP_014509966.1;Name=WP_014509966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227975.1;locus_tag=LDO09_RS02715;product=hypothetical protein;protein_id=WP_014509966.1;transl_table=11 NZ_AP024926.1 RefSeq gene 488994 489332 . - . ID=gene-LDO09_RS02720;Name=LDO09_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02720;old_locus_tag=TthAA11_05270 NZ_AP024926.1 Protein Homology CDS 488994 489332 . - 0 ID=cds-WP_008631771.1;Parent=gene-LDO09_RS02720;Dbxref=Genbank:WP_008631771.1;Name=WP_008631771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631771.1;locus_tag=LDO09_RS02720;product=hypothetical protein;protein_id=WP_008631771.1;transl_table=11 NZ_AP024926.1 RefSeq gene 489325 490767 . - . ID=gene-LDO09_RS02725;Name=LDO09_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02725;old_locus_tag=TthAA11_05280 NZ_AP024926.1 Protein Homology CDS 489325 490767 . - 0 ID=cds-WP_060384671.1;Parent=gene-LDO09_RS02725;Dbxref=Genbank:WP_060384671.1;Name=WP_060384671.1;Note=catalyzes the formation of 2-phospho-D-glyceroyl phosphate from ATP and 2-phospho-D-glycerate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631773.1;locus_tag=LDO09_RS02725;product=2-phosphoglycerate kinase;protein_id=WP_060384671.1;transl_table=11 NZ_AP024926.1 RefSeq gene 490853 490927 . + . ID=gene-LDO09_RS02730;Name=LDO09_RS02730;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS02730;old_locus_tag=TthAA11_t00200 NZ_AP024926.1 tRNAscan-SE tRNA 490853 490927 . + . ID=rna-LDO09_RS02730;Parent=gene-LDO09_RS02730;anticodon=(pos:490885..490887);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS02730;product=tRNA-Cys NZ_AP024926.1 tRNAscan-SE exon 490853 490927 . + . ID=exon-LDO09_RS02730-1;Parent=rna-LDO09_RS02730;anticodon=(pos:490885..490887);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS02730;product=tRNA-Cys NZ_AP024926.1 RefSeq gene 490936 491012 . + . ID=gene-LDO09_RS02735;Name=LDO09_RS02735;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS02735;old_locus_tag=TthAA11_t00210 NZ_AP024926.1 tRNAscan-SE tRNA 490936 491012 . + . ID=rna-LDO09_RS02735;Parent=gene-LDO09_RS02735;anticodon=(pos:490970..490972);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS02735;product=tRNA-Val NZ_AP024926.1 tRNAscan-SE exon 490936 491012 . + . ID=exon-LDO09_RS02735-1;Parent=rna-LDO09_RS02735;anticodon=(pos:490970..490972);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS02735;product=tRNA-Val NZ_AP024926.1 RefSeq gene 491053 491442 . + . ID=gene-LDO09_RS02740;Name=LDO09_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02740;old_locus_tag=TthAA11_05290 NZ_AP024926.1 Protein Homology CDS 491053 491442 . + 0 ID=cds-WP_011227977.1;Parent=gene-LDO09_RS02740;Dbxref=Genbank:WP_011227977.1;Name=WP_011227977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111494.1;locus_tag=LDO09_RS02740;product=NADH-quinone oxidoreductase subunit 15;protein_id=WP_011227977.1;transl_table=11 NZ_AP024926.1 RefSeq gene 491439 491840 . - . ID=gene-LDO09_RS02745;Name=LDO09_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02745;old_locus_tag=TthAA11_05300 NZ_AP024926.1 Protein Homology CDS 491439 491840 . - 0 ID=cds-WP_014630039.1;Parent=gene-LDO09_RS02745;Dbxref=Genbank:WP_014630039.1;Name=WP_014630039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716448.1;locus_tag=LDO09_RS02745;product=PaaI family thioesterase;protein_id=WP_014630039.1;transl_table=11 NZ_AP024926.1 RefSeq gene 491870 492988 . - . ID=gene-LDO09_RS02750;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LDO09_RS02750;old_locus_tag=TthAA11_05310 NZ_AP024926.1 Protein Homology CDS 491870 492988 . - 0 ID=cds-WP_014630038.1;Parent=gene-LDO09_RS02750;Dbxref=Genbank:WP_014630038.1;Name=WP_014630038.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516119.1;locus_tag=LDO09_RS02750;product=radical SAM family heme chaperone HemW;protein_id=WP_014630038.1;transl_table=11 NZ_AP024926.1 RefSeq gene 492981 493379 . - . ID=gene-LDO09_RS02755;Name=LDO09_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02755;old_locus_tag=TthAA11_05320 NZ_AP024926.1 Protein Homology CDS 492981 493379 . - 0 ID=cds-WP_096410965.1;Parent=gene-LDO09_RS02755;Dbxref=Genbank:WP_096410965.1;Name=WP_096410965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227979.1;locus_tag=LDO09_RS02755;product=HEPN domain-containing protein;protein_id=WP_096410965.1;transl_table=11 NZ_AP024926.1 RefSeq gene 493369 493686 . - . ID=gene-LDO09_RS02760;Name=LDO09_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02760;old_locus_tag=TthAA11_05330 NZ_AP024926.1 Protein Homology CDS 493369 493686 . - 0 ID=cds-WP_014509970.1;Parent=gene-LDO09_RS02760;Dbxref=Genbank:WP_014509970.1;Name=WP_014509970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509970.1;locus_tag=LDO09_RS02760;product=nucleotidyltransferase domain-containing protein;protein_id=WP_014509970.1;transl_table=11 NZ_AP024926.1 RefSeq gene 493691 494911 . - . ID=gene-LDO09_RS02765;Name=LDO09_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02765;old_locus_tag=TthAA11_05340 NZ_AP024926.1 Protein Homology CDS 493691 494911 . - 0 ID=cds-WP_143584831.1;Parent=gene-LDO09_RS02765;Dbxref=Genbank:WP_143584831.1;Name=WP_143584831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631777.1;locus_tag=LDO09_RS02765;product=glycerate kinase;protein_id=WP_143584831.1;transl_table=11 NZ_AP024926.1 RefSeq gene 494896 496176 . - . ID=gene-LDO09_RS02770;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=LDO09_RS02770;old_locus_tag=TthAA11_05350 NZ_AP024926.1 Protein Homology CDS 494896 496176 . - 0 ID=cds-WP_143584833.1;Parent=gene-LDO09_RS02770;Dbxref=Genbank:WP_143584833.1;Name=WP_143584833.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172582.1;locus_tag=LDO09_RS02770;product=glycolate oxidase subunit GlcF;protein_id=WP_143584833.1;transl_table=11 NZ_AP024926.1 RefSeq gene 496181 497224 . - . ID=gene-LDO09_RS02775;Name=LDO09_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02775;old_locus_tag=TthAA11_05360 NZ_AP024926.1 Protein Homology CDS 496181 497224 . - 0 ID=cds-WP_143584835.1;Parent=gene-LDO09_RS02775;Dbxref=Genbank:WP_143584835.1;Name=WP_143584835.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631780.1;locus_tag=LDO09_RS02775;product=FAD-binding protein;protein_id=WP_143584835.1;transl_table=11 NZ_AP024926.1 RefSeq gene 497211 498593 . - . ID=gene-LDO09_RS02780;Name=LDO09_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02780;old_locus_tag=TthAA11_05370 NZ_AP024926.1 Protein Homology CDS 497211 498593 . - 0 ID=cds-WP_143584837.1;Parent=gene-LDO09_RS02780;Dbxref=Genbank:WP_143584837.1;Name=WP_143584837.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631781.1;locus_tag=LDO09_RS02780;product=FAD-binding protein;protein_id=WP_143584837.1;transl_table=11 NZ_AP024926.1 RefSeq gene 498655 500217 . - . ID=gene-LDO09_RS02785;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=LDO09_RS02785;old_locus_tag=TthAA11_05380 NZ_AP024926.1 Protein Homology CDS 498655 500217 . - 0 ID=cds-WP_143584839.1;Parent=gene-LDO09_RS02785;Dbxref=Genbank:WP_143584839.1;Name=WP_143584839.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630031.1;locus_tag=LDO09_RS02785;product=malate synthase A;protein_id=WP_143584839.1;transl_table=11 NZ_AP024926.1 RefSeq gene 500316 501074 . + . ID=gene-LDO09_RS02790;Name=LDO09_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02790;old_locus_tag=TthAA11_05390 NZ_AP024926.1 Protein Homology CDS 500316 501074 . + 0 ID=cds-WP_014630030.1;Parent=gene-LDO09_RS02790;Dbxref=Genbank:WP_014630030.1;Name=WP_014630030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509975.1;locus_tag=LDO09_RS02790;product=IclR family transcriptional regulator;protein_id=WP_014630030.1;transl_table=11 NZ_AP024926.1 RefSeq gene 501117 501818 . + . ID=gene-LDO09_RS02795;Name=LDO09_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02795;old_locus_tag=TthAA11_05400 NZ_AP024926.1 Protein Homology CDS 501117 501818 . + 0 ID=cds-WP_143584841.1;Parent=gene-LDO09_RS02795;Dbxref=Genbank:WP_143584841.1;Name=WP_143584841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630029.1;locus_tag=LDO09_RS02795;product=helix-turn-helix transcriptional regulator;protein_id=WP_143584841.1;transl_table=11 NZ_AP024926.1 RefSeq gene 501890 503188 . + . ID=gene-LDO09_RS02800;Name=LDO09_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02800;old_locus_tag=TthAA11_05410 NZ_AP024926.1 Protein Homology CDS 501890 503188 . + 0 ID=cds-WP_143584843.1;Parent=gene-LDO09_RS02800;Dbxref=Genbank:WP_143584843.1;Name=WP_143584843.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630028.1;locus_tag=LDO09_RS02800;product=dipeptidase;protein_id=WP_143584843.1;transl_table=11 NZ_AP024926.1 RefSeq gene 503211 503540 . - . ID=gene-LDO09_RS02805;Name=LDO09_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02805;old_locus_tag=TthAA11_05420 NZ_AP024926.1 Protein Homology CDS 503211 503540 . - 0 ID=cds-WP_011172589.1;Parent=gene-LDO09_RS02805;Dbxref=Genbank:WP_011172589.1;Name=WP_011172589.1;Ontology_term=GO:0000049;gbkey=CDS;go_function=tRNA binding|0000049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227991.1;locus_tag=LDO09_RS02805;product=tRNA-binding protein;protein_id=WP_011172589.1;transl_table=11 NZ_AP024926.1 RefSeq gene 503581 504717 . - . ID=gene-LDO09_RS02810;Name=LDO09_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02810;old_locus_tag=TthAA11_05430 NZ_AP024926.1 Protein Homology CDS 503581 504717 . - 0 ID=cds-WP_172619163.1;Parent=gene-LDO09_RS02810;Dbxref=Genbank:WP_172619163.1;Name=WP_172619163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630027.1;locus_tag=LDO09_RS02810;product=AMP-binding protein;protein_id=WP_172619163.1;transl_table=11 NZ_AP024926.1 RefSeq gene 504772 505827 . - . ID=gene-LDO09_RS02815;Name=LDO09_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02815;old_locus_tag=TthAA11_05440 NZ_AP024926.1 Protein Homology CDS 504772 505827 . - 0 ID=cds-WP_143584847.1;Parent=gene-LDO09_RS02815;Dbxref=Genbank:WP_143584847.1;Name=WP_143584847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630026.1;locus_tag=LDO09_RS02815;product=hypothetical protein;protein_id=WP_143584847.1;transl_table=11 NZ_AP024926.1 RefSeq gene 505824 506933 . - . ID=gene-LDO09_RS02820;Name=LDO09_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02820;old_locus_tag=TthAA11_05450 NZ_AP024926.1 Protein Homology CDS 505824 506933 . - 0 ID=cds-WP_143584849.1;Parent=gene-LDO09_RS02820;Dbxref=Genbank:WP_143584849.1;Name=WP_143584849.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227994.1;locus_tag=LDO09_RS02820;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_143584849.1;transl_table=11 NZ_AP024926.1 RefSeq gene 506930 507424 . - . ID=gene-LDO09_RS02825;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LDO09_RS02825;old_locus_tag=TthAA11_05460 NZ_AP024926.1 Protein Homology CDS 506930 507424 . - 0 ID=cds-WP_011172593.1;Parent=gene-LDO09_RS02825;Dbxref=Genbank:WP_011172593.1;Name=WP_011172593.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631799.1;locus_tag=LDO09_RS02825;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_011172593.1;transl_table=11 NZ_AP024926.1 RefSeq gene 507473 508429 . + . ID=gene-LDO09_RS02830;Name=LDO09_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02830;old_locus_tag=TthAA11_05470 NZ_AP024926.1 Protein Homology CDS 507473 508429 . + 0 ID=cds-WP_143584850.1;Parent=gene-LDO09_RS02830;Dbxref=Genbank:WP_143584850.1;Name=WP_143584850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509978.1;locus_tag=LDO09_RS02830;product=sodium-dependent bicarbonate transport family permease;protein_id=WP_143584850.1;transl_table=11 NZ_AP024926.1 RefSeq gene 508433 508735 . + . ID=gene-LDO09_RS02835;Name=LDO09_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02835;old_locus_tag=TthAA11_05480 NZ_AP024926.1 Protein Homology CDS 508433 508735 . + 0 ID=cds-WP_011227996.1;Parent=gene-LDO09_RS02835;Dbxref=Genbank:WP_011227996.1;Name=WP_011227996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011227996.1;locus_tag=LDO09_RS02835;product=hypothetical protein;protein_id=WP_011227996.1;transl_table=11 NZ_AP024926.1 RefSeq gene 508749 509285 . - . ID=gene-LDO09_RS02840;Name=LDO09_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02840;old_locus_tag=TthAA11_05490 NZ_AP024926.1 Protein Homology CDS 508749 509285 . - 0 ID=cds-WP_143584852.1;Parent=gene-LDO09_RS02840;Dbxref=Genbank:WP_143584852.1;Name=WP_143584852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630023.1;locus_tag=LDO09_RS02840;product=VTT domain-containing protein;protein_id=WP_143584852.1;transl_table=11 NZ_AP024926.1 RefSeq gene 509282 509974 . - . ID=gene-LDO09_RS02845;Name=LDO09_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02845;old_locus_tag=TthAA11_05500 NZ_AP024926.1 Protein Homology CDS 509282 509974 . - 0 ID=cds-WP_014630022.1;Parent=gene-LDO09_RS02845;Dbxref=Genbank:WP_014630022.1;Name=WP_014630022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630022.1;locus_tag=LDO09_RS02845;product=membrane protein;protein_id=WP_014630022.1;transl_table=11 NZ_AP024926.1 RefSeq gene 510173 510508 . + . ID=gene-LDO09_RS02850;Name=LDO09_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02850;old_locus_tag=TthAA11_05510 NZ_AP024926.1 Protein Homology CDS 510173 510508 . + 0 ID=cds-WP_008631806.1;Parent=gene-LDO09_RS02850;Dbxref=Genbank:WP_008631806.1;Name=WP_008631806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631806.1;locus_tag=LDO09_RS02850;product=iron-sulfur cluster assembly protein;protein_id=WP_008631806.1;transl_table=11 NZ_AP024926.1 RefSeq gene 510527 512257 . + . ID=gene-LDO09_RS02855;Name=LDO09_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02855;old_locus_tag=TthAA11_05520 NZ_AP024926.1 Protein Homology CDS 510527 512257 . + 0 ID=cds-WP_143584854.1;Parent=gene-LDO09_RS02855;Dbxref=Genbank:WP_143584854.1;Name=WP_143584854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515186.1;locus_tag=LDO09_RS02855;product=NAD-dependent malic enzyme;protein_id=WP_143584854.1;transl_table=11 NZ_AP024926.1 RefSeq gene 512262 513143 . + . ID=gene-LDO09_RS02860;Name=LDO09_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02860;old_locus_tag=TthAA11_05530 NZ_AP024926.1 Protein Homology CDS 512262 513143 . + 0 ID=cds-WP_143584856.1;Parent=gene-LDO09_RS02860;Dbxref=Genbank:WP_143584856.1;Name=WP_143584856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631808.1;locus_tag=LDO09_RS02860;product=nuclease;protein_id=WP_143584856.1;transl_table=11 NZ_AP024926.1 RefSeq gene 513140 514870 . + . ID=gene-LDO09_RS02865;Name=LDO09_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02865;old_locus_tag=TthAA11_05540 NZ_AP024926.1 Protein Homology CDS 513140 514870 . + 0 ID=cds-WP_143584858.1;Parent=gene-LDO09_RS02865;Dbxref=Genbank:WP_143584858.1;Name=WP_143584858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509983.1;locus_tag=LDO09_RS02865;product=ATP-binding protein;protein_id=WP_143584858.1;transl_table=11 NZ_AP024926.1 RefSeq gene 514883 515932 . + . ID=gene-LDO09_RS02870;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LDO09_RS02870;old_locus_tag=TthAA11_05550 NZ_AP024926.1 Protein Homology CDS 514883 515932 . + 0 ID=cds-WP_143584860.1;Parent=gene-LDO09_RS02870;Dbxref=Genbank:WP_143584860.1;Name=WP_143584860.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630018.1;locus_tag=LDO09_RS02870;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_143584860.1;transl_table=11 NZ_AP024926.1 RefSeq gene 515951 516337 . + . ID=gene-LDO09_RS02875;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LDO09_RS02875;old_locus_tag=TthAA11_05560 NZ_AP024926.1 Protein Homology CDS 515951 516337 . + 0 ID=cds-WP_008631819.1;Parent=gene-LDO09_RS02875;Dbxref=Genbank:WP_008631819.1;Name=WP_008631819.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228002.1;locus_tag=LDO09_RS02875;product=glycine cleavage system protein GcvH;protein_id=WP_008631819.1;transl_table=11 NZ_AP024926.1 RefSeq gene 516447 517763 . + . ID=gene-LDO09_RS02880;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=LDO09_RS02880;old_locus_tag=TthAA11_05570 NZ_AP024926.1 Protein Homology CDS 516447 517763 . + 0 ID=cds-WP_143584862.1;Parent=gene-LDO09_RS02880;Dbxref=Genbank:WP_143584862.1;Name=WP_143584862.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111736.1;locus_tag=LDO09_RS02880;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WP_143584862.1;transl_table=11 NZ_AP024926.1 RefSeq gene 517760 519184 . + . ID=gene-LDO09_RS02885;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=LDO09_RS02885;old_locus_tag=TthAA11_05580 NZ_AP024926.1 Protein Homology CDS 517760 519184 . + 0 ID=cds-WP_008631821.1;Parent=gene-LDO09_RS02885;Dbxref=Genbank:WP_008631821.1;Name=WP_008631821.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228003.1;locus_tag=LDO09_RS02885;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WP_008631821.1;transl_table=11 NZ_AP024926.1 RefSeq gene 519233 520117 . - . ID=gene-LDO09_RS02890;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=LDO09_RS02890;old_locus_tag=TthAA11_05590 NZ_AP024926.1 Protein Homology CDS 519233 520117 . - 0 ID=cds-WP_143584864.1;Parent=gene-LDO09_RS02890;Dbxref=Genbank:WP_143584864.1;Name=WP_143584864.1;Ontology_term=GO:0006747,GO:0009398,GO:0003919,GO:0005737;gbkey=CDS;gene=ribF;go_component=cytoplasm|0005737||IEA;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=FAD biosynthetic process|0006747||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019549957.1;locus_tag=LDO09_RS02890;product=riboflavin biosynthesis protein RibF;protein_id=WP_143584864.1;transl_table=11 NZ_AP024926.1 RefSeq gene 520095 520607 . - . ID=gene-LDO09_RS02895;Name=ndx4;gbkey=Gene;gene=ndx4;gene_biotype=protein_coding;locus_tag=LDO09_RS02895;old_locus_tag=TthAA11_05600 NZ_AP024926.1 Protein Homology CDS 520095 520607 . - 0 ID=cds-WP_143584866.1;Parent=gene-LDO09_RS02895;Dbxref=Genbank:WP_143584866.1;Name=WP_143584866.1;gbkey=CDS;gene=ndx4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172615.1;locus_tag=LDO09_RS02895;product=ADP-ribose pyrophosphatase Ndx4;protein_id=WP_143584866.1;transl_table=11 NZ_AP024926.1 RefSeq gene 520606 521979 . + . ID=gene-LDO09_RS02900;Name=LDO09_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02900;old_locus_tag=TthAA11_05610 NZ_AP024926.1 Protein Homology CDS 520606 521979 . + 0 ID=cds-WP_172619165.1;Parent=gene-LDO09_RS02900;Dbxref=Genbank:WP_172619165.1;Name=WP_172619165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329011.1;locus_tag=LDO09_RS02900;product=amidohydrolase family protein;protein_id=WP_172619165.1;transl_table=11 NZ_AP024926.1 RefSeq gene 522006 522512 . + . ID=gene-LDO09_RS02905;Name=LDO09_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02905;old_locus_tag=TthAA11_05620 NZ_AP024926.1 Protein Homology CDS 522006 522512 . + 0 ID=cds-WP_060384658.1;Parent=gene-LDO09_RS02905;Dbxref=Genbank:WP_060384658.1;Name=WP_060384658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631827.1;locus_tag=LDO09_RS02905;product=2'-5' RNA ligase family protein;protein_id=WP_060384658.1;transl_table=11 NZ_AP024926.1 RefSeq gene 522496 523323 . - . ID=gene-LDO09_RS02910;Name=LDO09_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02910;old_locus_tag=TthAA11_05630 NZ_AP024926.1 Protein Homology CDS 522496 523323 . - 0 ID=cds-WP_143584868.1;Parent=gene-LDO09_RS02910;Dbxref=Genbank:WP_143584868.1;Name=WP_143584868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172618.1;locus_tag=LDO09_RS02910;product=DMT family transporter;protein_id=WP_143584868.1;transl_table=11 NZ_AP024926.1 RefSeq gene 523372 524640 . - . ID=gene-LDO09_RS02915;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LDO09_RS02915;old_locus_tag=TthAA11_05640 NZ_AP024926.1 Protein Homology CDS 523372 524640 . - 0 ID=cds-WP_008631831.1;Parent=gene-LDO09_RS02915;Dbxref=Genbank:WP_008631831.1;Name=WP_008631831.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoD;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228005.1;locus_tag=LDO09_RS02915;product=RNA polymerase sigma factor RpoD;protein_id=WP_008631831.1;transl_table=11 NZ_AP024926.1 RefSeq gene 524644 525771 . - . ID=gene-LDO09_RS02920;Name=LDO09_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02920;old_locus_tag=TthAA11_05650 NZ_AP024926.1 Protein Homology CDS 524644 525771 . - 0 ID=cds-WP_143584870.1;Parent=gene-LDO09_RS02920;Dbxref=Genbank:WP_143584870.1;Name=WP_143584870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172620.1;locus_tag=LDO09_RS02920;product=class I SAM-dependent methyltransferase;protein_id=WP_143584870.1;transl_table=11 NZ_AP024926.1 RefSeq gene 525862 527079 . + . ID=gene-LDO09_RS02925;Name=LDO09_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02925;old_locus_tag=TthAA11_05660 NZ_AP024926.1 Protein Homology CDS 525862 527079 . + 0 ID=cds-WP_008631836.1;Parent=gene-LDO09_RS02925;Dbxref=Genbank:WP_008631836.1;Name=WP_008631836.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228007.1;locus_tag=LDO09_RS02925;product=aspartate kinase;protein_id=WP_008631836.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 527087 527350 . + . ID=gene-LDO09_RS02930;Name=LDO09_RS02930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS02930;old_locus_tag=TthAA11_05670;partial=true;pseudo=true;start_range=.,527087 NZ_AP024926.1 Protein Homology CDS 527087 527350 . + 0 ID=cds-LDO09_RS02930;Parent=gene-LDO09_RS02930;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228008.1;locus_tag=LDO09_RS02930;partial=true;product=phosphoribosyltransferase;pseudo=true;start_range=.,527087;transl_table=11 NZ_AP024926.1 RefSeq gene 527494 528477 . - . ID=gene-LDO09_RS02935;Name=LDO09_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02935;old_locus_tag=TthAA11_05680 NZ_AP024926.1 Protein Homology CDS 527494 528477 . - 0 ID=cds-WP_011172623.1;Parent=gene-LDO09_RS02935;Dbxref=Genbank:WP_011172623.1;Name=WP_011172623.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631840.1;locus_tag=LDO09_RS02935;product=malate dehydrogenase;protein_id=WP_011172623.1;transl_table=11 NZ_AP024926.1 RefSeq gene 528492 529358 . - . ID=gene-LDO09_RS02940;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=LDO09_RS02940;old_locus_tag=TthAA11_05690 NZ_AP024926.1 Protein Homology CDS 528492 529358 . - 0 ID=cds-WP_143584872.1;Parent=gene-LDO09_RS02940;Dbxref=Genbank:WP_143584872.1;Name=WP_143584872.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550025.1;locus_tag=LDO09_RS02940;product=succinate--CoA ligase subunit alpha;protein_id=WP_143584872.1;transl_table=11 NZ_AP024926.1 RefSeq gene 529355 530530 . - . ID=gene-LDO09_RS02945;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=LDO09_RS02945;old_locus_tag=TthAA11_05700 NZ_AP024926.1 Protein Homology CDS 529355 530530 . - 0 ID=cds-WP_143584874.1;Parent=gene-LDO09_RS02945;Dbxref=Genbank:WP_143584874.1;Name=WP_143584874.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631848.1;locus_tag=LDO09_RS02945;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_143584874.1;transl_table=11 NZ_AP024926.1 RefSeq gene 530575 531609 . + . ID=gene-LDO09_RS02950;Name=LDO09_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02950;old_locus_tag=TthAA11_05710 NZ_AP024926.1 Protein Homology CDS 530575 531609 . + 0 ID=cds-WP_143584876.1;Parent=gene-LDO09_RS02950;Dbxref=Genbank:WP_143584876.1;Name=WP_143584876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228011.1;locus_tag=LDO09_RS02950;product=bis-aminopropyl spermidine synthase family protein;protein_id=WP_143584876.1;transl_table=11 NZ_AP024926.1 RefSeq gene 531603 532613 . - . ID=gene-LDO09_RS02955;Name=LDO09_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02955;old_locus_tag=TthAA11_05720 NZ_AP024926.1 Protein Homology CDS 531603 532613 . - 0 ID=cds-WP_143584877.1;Parent=gene-LDO09_RS02955;Dbxref=Genbank:WP_143584877.1;Name=WP_143584877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172627.1;locus_tag=LDO09_RS02955;product=TRAM domain-containing protein;protein_id=WP_143584877.1;transl_table=11 NZ_AP024926.1 RefSeq gene 532610 533881 . - . ID=gene-LDO09_RS02960;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LDO09_RS02960;old_locus_tag=TthAA11_05730 NZ_AP024926.1 Protein Homology CDS 532610 533881 . - 0 ID=cds-WP_011228013.1;Parent=gene-LDO09_RS02960;Dbxref=Genbank:WP_011228013.1;Name=WP_011228013.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630004.1;locus_tag=LDO09_RS02960;product=DNA repair protein RadA;protein_id=WP_011228013.1;transl_table=11 NZ_AP024926.1 RefSeq gene 533892 536102 . - . ID=gene-LDO09_RS02965;Name=LDO09_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02965;old_locus_tag=TthAA11_05740 NZ_AP024926.1 Protein Homology CDS 533892 536102 . - 0 ID=cds-WP_011172629.1;Parent=gene-LDO09_RS02965;Dbxref=Genbank:WP_011172629.1;Name=WP_011172629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509991.1;locus_tag=LDO09_RS02965;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_011172629.1;transl_table=11 NZ_AP024926.1 RefSeq gene 536231 537751 . + . ID=gene-LDO09_RS02970;Name=LDO09_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02970;old_locus_tag=TthAA11_05750 NZ_AP024926.1 Protein Homology CDS 536231 537751 . + 0 ID=cds-WP_143584879.1;Parent=gene-LDO09_RS02970;Dbxref=Genbank:WP_143584879.1;Name=WP_143584879.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716718.1;locus_tag=LDO09_RS02970;product=glycine--tRNA ligase;protein_id=WP_143584879.1;transl_table=11 NZ_AP024926.1 RefSeq gene 537965 538159 . + . ID=gene-LDO09_RS02975;Name=LDO09_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02975;old_locus_tag=TthAA11_05760 NZ_AP024926.1 Protein Homology CDS 537965 538159 . + 0 ID=cds-WP_051105271.1;Parent=gene-LDO09_RS02975;Dbxref=Genbank:WP_051105271.1;Name=WP_051105271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172631.1;locus_tag=LDO09_RS02975;product=hypothetical protein;protein_id=WP_051105271.1;transl_table=11 NZ_AP024926.1 RefSeq gene 538156 539151 . + . ID=gene-LDO09_RS02980;Name=LDO09_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02980;old_locus_tag=TthAA11_05770 NZ_AP024926.1 Protein Homology CDS 538156 539151 . + 0 ID=cds-WP_011172632.1;Parent=gene-LDO09_RS02980;Dbxref=Genbank:WP_011172632.1;Name=WP_011172632.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631862.1;locus_tag=LDO09_RS02980;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_011172632.1;transl_table=11 NZ_AP024926.1 RefSeq gene 539138 539845 . - . ID=gene-LDO09_RS02985;Name=LDO09_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02985;old_locus_tag=TthAA11_05780 NZ_AP024926.1 Protein Homology CDS 539138 539845 . - 0 ID=cds-WP_143584881.1;Parent=gene-LDO09_RS02985;Dbxref=Genbank:WP_143584881.1;Name=WP_143584881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630000.1;locus_tag=LDO09_RS02985;product=TlyA family RNA methyltransferase;protein_id=WP_143584881.1;transl_table=11 NZ_AP024926.1 RefSeq gene 539863 540174 . + . ID=gene-LDO09_RS02990;Name=LDO09_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02990;old_locus_tag=TthAA11_05790 NZ_AP024926.1 Protein Homology CDS 539863 540174 . + 0 ID=cds-WP_008631869.1;Parent=gene-LDO09_RS02990;Dbxref=Genbank:WP_008631869.1;Name=WP_008631869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228017.1;locus_tag=LDO09_RS02990;product=DUF3234 domain-containing protein;protein_id=WP_008631869.1;transl_table=11 NZ_AP024926.1 RefSeq gene 540167 540595 . + . ID=gene-LDO09_RS02995;Name=LDO09_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS02995;old_locus_tag=TthAA11_05800 NZ_AP024926.1 Protein Homology CDS 540167 540595 . + 0 ID=cds-WP_143584883.1;Parent=gene-LDO09_RS02995;Dbxref=Genbank:WP_143584883.1;Name=WP_143584883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228018.1;locus_tag=LDO09_RS02995;product=hypothetical protein;protein_id=WP_143584883.1;transl_table=11 NZ_AP024926.1 RefSeq gene 540680 542326 . - . ID=gene-LDO09_RS03000;Name=LDO09_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03000;old_locus_tag=TthAA11_05810 NZ_AP024926.1 Protein Homology CDS 540680 542326 . - 0 ID=cds-WP_143584885.1;Parent=gene-LDO09_RS03000;Dbxref=Genbank:WP_143584885.1;Name=WP_143584885.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228019.1;locus_tag=LDO09_RS03000;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=WP_143584885.1;transl_table=11 NZ_AP024926.1 RefSeq gene 542340 543101 . - . ID=gene-LDO09_RS03005;Name=LDO09_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03005;old_locus_tag=TthAA11_05820 NZ_AP024926.1 Protein Homology CDS 542340 543101 . - 0 ID=cds-WP_011228020.1;Parent=gene-LDO09_RS03005;Dbxref=Genbank:WP_011228020.1;Name=WP_011228020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112177.1;locus_tag=LDO09_RS03005;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_011228020.1;transl_table=11 NZ_AP024926.1 RefSeq gene 543196 543711 . + . ID=gene-LDO09_RS03010;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LDO09_RS03010;old_locus_tag=TthAA11_05830 NZ_AP024926.1 Protein Homology CDS 543196 543711 . + 0 ID=cds-WP_124104831.1;Parent=gene-LDO09_RS03010;Dbxref=Genbank:WP_124104831.1;Name=WP_124104831.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629997.1;locus_tag=LDO09_RS03010;product=translation initiation factor IF-3;protein_id=WP_124104831.1;transl_table=11 NZ_AP024926.1 RefSeq gene 543805 544002 . + . ID=gene-LDO09_RS03015;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LDO09_RS03015;old_locus_tag=TthAA11_05840 NZ_AP024926.1 Protein Homology CDS 543805 544002 . + 0 ID=cds-WP_011172638.1;Parent=gene-LDO09_RS03015;Dbxref=Genbank:WP_011172638.1;Name=WP_011172638.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329031.1;locus_tag=LDO09_RS03015;product=50S ribosomal protein L35;protein_id=WP_011172638.1;transl_table=11 NZ_AP024926.1 RefSeq gene 544014 544370 . + . ID=gene-LDO09_RS03020;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LDO09_RS03020;old_locus_tag=TthAA11_05850 NZ_AP024926.1 Protein Homology CDS 544014 544370 . + 0 ID=cds-WP_011172639.1;Parent=gene-LDO09_RS03020;Dbxref=Genbank:WP_011172639.1;Name=WP_011172639.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172639.1;locus_tag=LDO09_RS03020;product=50S ribosomal protein L20;protein_id=WP_011172639.1;transl_table=11 NZ_AP024926.1 RefSeq gene 544413 544883 . + . ID=gene-LDO09_RS03025;Name=LDO09_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03025;old_locus_tag=TthAA11_05860 NZ_AP024926.1 Protein Homology CDS 544413 544883 . + 0 ID=cds-WP_143584887.1;Parent=gene-LDO09_RS03025;Dbxref=Genbank:WP_143584887.1;Name=WP_143584887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014509999.1;locus_tag=LDO09_RS03025;product=small multi-drug export protein;protein_id=WP_143584887.1;transl_table=11 NZ_AP024926.1 RefSeq gene 544880 546541 . + . ID=gene-LDO09_RS03030;Name=LDO09_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03030;old_locus_tag=TthAA11_05870 NZ_AP024926.1 Protein Homology CDS 544880 546541 . + 0 ID=cds-WP_143584890.1;Parent=gene-LDO09_RS03030;Dbxref=Genbank:WP_143584890.1;Name=WP_143584890.1;Ontology_term=GO:0008654,GO:0043772,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=acyl-phosphate glycerol-3-phosphate acyltransferase activity|0043772||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228022.1;locus_tag=LDO09_RS03030;product=glycerol-3-phosphate acyltransferase;protein_id=WP_143584890.1;transl_table=11 NZ_AP024926.1 RefSeq gene 546541 547218 . + . ID=gene-LDO09_RS03035;Name=mqnB;gbkey=Gene;gene=mqnB;gene_biotype=protein_coding;locus_tag=LDO09_RS03035;old_locus_tag=TthAA11_05880 NZ_AP024926.1 Protein Homology CDS 546541 547218 . + 0 ID=cds-WP_143584892.1;Parent=gene-LDO09_RS03035;Dbxref=Genbank:WP_143584892.1;Name=WP_143584892.1;Ontology_term=GO:0009234;gbkey=CDS;gene=mqnB;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172642.1;locus_tag=LDO09_RS03035;product=futalosine hydrolase;protein_id=WP_143584892.1;transl_table=11 NZ_AP024926.1 RefSeq gene 547231 547845 . - . ID=gene-LDO09_RS03040;Name=LDO09_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03040;old_locus_tag=TthAA11_05890 NZ_AP024926.1 Protein Homology CDS 547231 547845 . - 0 ID=cds-WP_014629993.1;Parent=gene-LDO09_RS03040;Dbxref=Genbank:WP_014629993.1;Name=WP_014629993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629993.1;locus_tag=LDO09_RS03040;product=superoxide dismutase;protein_id=WP_014629993.1;transl_table=11 NZ_AP024926.1 RefSeq gene 547920 549320 . - . ID=gene-LDO09_RS03045;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=LDO09_RS03045;old_locus_tag=TthAA11_05900 NZ_AP024926.1 Protein Homology CDS 547920 549320 . - 0 ID=cds-WP_014629992.1;Parent=gene-LDO09_RS03045;Dbxref=Genbank:WP_014629992.1;Name=WP_014629992.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629992.1;locus_tag=LDO09_RS03045;product=class II fumarate hydratase;protein_id=WP_014629992.1;transl_table=11 NZ_AP024926.1 RefSeq gene 549373 550563 . + . ID=gene-LDO09_RS03050;Name=LDO09_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03050;old_locus_tag=TthAA11_05910 NZ_AP024926.1 Protein Homology CDS 549373 550563 . + 0 ID=cds-WP_143584894.1;Parent=gene-LDO09_RS03050;Dbxref=Genbank:WP_143584894.1;Name=WP_143584894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515282.1;locus_tag=LDO09_RS03050;product=thiolase family protein;protein_id=WP_143584894.1;transl_table=11 NZ_AP024926.1 RefSeq gene 550574 550882 . - . ID=gene-LDO09_RS03055;Name=LDO09_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03055;old_locus_tag=TthAA11_05920 NZ_AP024926.1 Protein Homology CDS 550574 550882 . - 0 ID=cds-WP_011172646.1;Parent=gene-LDO09_RS03055;Dbxref=Genbank:WP_011172646.1;Name=WP_011172646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716682.1;locus_tag=LDO09_RS03055;product=DUF503 domain-containing protein;protein_id=WP_011172646.1;transl_table=11 NZ_AP024926.1 RefSeq gene 550916 553384 . - . ID=gene-LDO09_RS03060;Name=LDO09_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03060;old_locus_tag=TthAA11_05930 NZ_AP024926.1 Protein Homology CDS 550916 553384 . - 0 ID=cds-WP_143584896.1;Parent=gene-LDO09_RS03060;Dbxref=Genbank:WP_143584896.1;Name=WP_143584896.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631896.1;locus_tag=LDO09_RS03060;product=BamA/TamA family outer membrane protein;protein_id=WP_143584896.1;transl_table=11 NZ_AP024926.1 RefSeq gene 553430 554257 . + . ID=gene-LDO09_RS03065;Name=LDO09_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03065;old_locus_tag=TthAA11_05940 NZ_AP024926.1 Protein Homology CDS 553430 554257 . + 0 ID=cds-WP_143584898.1;Parent=gene-LDO09_RS03065;Dbxref=Genbank:WP_143584898.1;Name=WP_143584898.1;Ontology_term=GO:0009116,GO:0004731;gbkey=CDS;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551752.1;locus_tag=LDO09_RS03065;product=purine-nucleoside phosphorylase;protein_id=WP_143584898.1;transl_table=11 NZ_AP024926.1 RefSeq gene 554307 554942 . + . ID=gene-LDO09_RS03070;Name=LDO09_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03070;old_locus_tag=TthAA11_05950 NZ_AP024926.1 Protein Homology CDS 554307 554942 . + 0 ID=cds-WP_143584900.1;Parent=gene-LDO09_RS03070;Dbxref=Genbank:WP_143584900.1;Name=WP_143584900.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631898.1;locus_tag=LDO09_RS03070;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_143584900.1;transl_table=11 NZ_AP024926.1 RefSeq gene 554951 555403 . + . ID=gene-LDO09_RS03075;Name=LDO09_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03075;old_locus_tag=TthAA11_05960 NZ_AP024926.1 Protein Homology CDS 554951 555403 . + 0 ID=cds-WP_060384641.1;Parent=gene-LDO09_RS03075;Dbxref=Genbank:WP_060384641.1;Name=WP_060384641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228028.1;locus_tag=LDO09_RS03075;product=DivIVA domain-containing protein;protein_id=WP_060384641.1;transl_table=11 NZ_AP024926.1 RefSeq gene 555364 555909 . - . ID=gene-LDO09_RS03080;Name=LDO09_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03080;old_locus_tag=TthAA11_05970 NZ_AP024926.1 Protein Homology CDS 555364 555909 . - 0 ID=cds-WP_124104822.1;Parent=gene-LDO09_RS03080;Dbxref=Genbank:WP_124104822.1;Name=WP_124104822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631900.1;locus_tag=LDO09_RS03080;product=YdcF family protein;protein_id=WP_124104822.1;transl_table=11 NZ_AP024926.1 RefSeq gene 555942 557594 . + . ID=gene-LDO09_RS03085;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LDO09_RS03085;old_locus_tag=TthAA11_05980 NZ_AP024926.1 Protein Homology CDS 555942 557594 . + 0 ID=cds-WP_011172652.1;Parent=gene-LDO09_RS03085;Dbxref=Genbank:WP_011172652.1;Name=WP_011172652.1;Ontology_term=GO:0008150,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172652.1;locus_tag=LDO09_RS03085;product=GTPase HflX;protein_id=WP_011172652.1;transl_table=11 NZ_AP024926.1 RefSeq gene 557582 557848 . - . ID=gene-LDO09_RS03090;Name=LDO09_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03090;old_locus_tag=TthAA11_05990 NZ_AP024926.1 Protein Homology CDS 557582 557848 . - 0 ID=cds-WP_008631905.1;Parent=gene-LDO09_RS03090;Dbxref=Genbank:WP_008631905.1;Name=WP_008631905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329046.1;locus_tag=LDO09_RS03090;product=acylphosphatase;protein_id=WP_008631905.1;transl_table=11 NZ_AP024926.1 RefSeq gene 557908 565926 . + . ID=gene-LDO09_RS03095;Name=LDO09_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03095;old_locus_tag=TthAA11_06010 NZ_AP024926.1 Protein Homology CDS 557908 565926 . + 0 ID=cds-WP_223968866.1;Parent=gene-LDO09_RS03095;Dbxref=Genbank:WP_223968866.1;Name=WP_223968866.1;Ontology_term=GO:0009306,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172653.1;locus_tag=LDO09_RS03095;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_223968866.1;transl_table=11 NZ_AP024926.1 RefSeq gene 565939 566970 . + . ID=gene-LDO09_RS03100;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=LDO09_RS03100;old_locus_tag=TthAA11_06020 NZ_AP024926.1 Protein Homology CDS 565939 566970 . + 0 ID=cds-WP_223968868.1;Parent=gene-LDO09_RS03100;Dbxref=Genbank:WP_223968868.1;Name=WP_223968868.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461762.1;locus_tag=LDO09_RS03100;product=L-threonine 3-dehydrogenase;protein_id=WP_223968868.1;transl_table=11 NZ_AP024926.1 RefSeq gene 567092 570106 . + . ID=gene-LDO09_RS03105;Name=LDO09_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03105;old_locus_tag=TthAA11_06030 NZ_AP024926.1 GeneMarkS-2+ CDS 567092 570106 . + 0 ID=cds-WP_197735235.1;Parent=gene-LDO09_RS03105;Dbxref=Genbank:WP_197735235.1;Name=WP_197735235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS03105;product=hypothetical protein;protein_id=WP_197735235.1;transl_table=11 NZ_AP024926.1 RefSeq gene 570265 571326 . + . ID=gene-LDO09_RS03110;Name=LDO09_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03110;old_locus_tag=TthAA11_06040 NZ_AP024926.1 Protein Homology CDS 570265 571326 . + 0 ID=cds-WP_223968870.1;Parent=gene-LDO09_RS03110;Dbxref=Genbank:WP_223968870.1;Name=WP_223968870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329049.1;locus_tag=LDO09_RS03110;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_223968870.1;transl_table=11 NZ_AP024926.1 RefSeq gene 571312 571722 . - . ID=gene-LDO09_RS03115;Name=LDO09_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03115;old_locus_tag=TthAA11_06050 NZ_AP024926.1 Protein Homology CDS 571312 571722 . - 0 ID=cds-WP_008631910.1;Parent=gene-LDO09_RS03115;Dbxref=Genbank:WP_008631910.1;Name=WP_008631910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631910.1;locus_tag=LDO09_RS03115;product=Hsp20/alpha crystallin family protein;protein_id=WP_008631910.1;transl_table=11 NZ_AP024926.1 RefSeq gene 571741 572649 . + . ID=gene-LDO09_RS03120;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LDO09_RS03120;old_locus_tag=TthAA11_06060 NZ_AP024926.1 Protein Homology CDS 571741 572649 . + 0 ID=cds-WP_223968871.1;Parent=gene-LDO09_RS03120;Dbxref=Genbank:WP_223968871.1;Name=WP_223968871.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228033.1;locus_tag=LDO09_RS03120;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_223968871.1;transl_table=11 NZ_AP024926.1 RefSeq gene 572657 574072 . + . ID=gene-LDO09_RS03125;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=LDO09_RS03125;old_locus_tag=TthAA11_06070 NZ_AP024926.1 Protein Homology CDS 572657 574072 . + 0 ID=cds-WP_223968873.1;Parent=gene-LDO09_RS03125;Dbxref=Genbank:WP_223968873.1;Name=WP_223968873.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631912.1;locus_tag=LDO09_RS03125;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_223968873.1;transl_table=11 NZ_AP024926.1 RefSeq gene 574072 574815 . + . ID=gene-LDO09_RS03130;Name=LDO09_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03130;old_locus_tag=TthAA11_06080 NZ_AP024926.1 Protein Homology CDS 574072 574815 . + 0 ID=cds-WP_223968875.1;Parent=gene-LDO09_RS03130;Dbxref=Genbank:WP_223968875.1;Name=WP_223968875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631913.1;locus_tag=LDO09_RS03130;product=3'-5' exonuclease;protein_id=WP_223968875.1;transl_table=11 NZ_AP024926.1 RefSeq gene 574817 575869 . + . ID=gene-LDO09_RS03135;Name=LDO09_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03135;old_locus_tag=TthAA11_06090 NZ_AP024926.1 Protein Homology CDS 574817 575869 . + 0 ID=cds-WP_223968877.1;Parent=gene-LDO09_RS03135;Dbxref=Genbank:WP_223968877.1;Name=WP_223968877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629978.1;locus_tag=LDO09_RS03135;product=hypothetical protein;protein_id=WP_223968877.1;transl_table=11 NZ_AP024926.1 RefSeq gene 575847 576836 . - . ID=gene-LDO09_RS03140;Name=csaB;gbkey=Gene;gene=csaB;gene_biotype=protein_coding;locus_tag=LDO09_RS03140;old_locus_tag=TthAA11_06100 NZ_AP024926.1 Protein Homology CDS 575847 576836 . - 0 ID=cds-WP_223966128.1;Parent=gene-LDO09_RS03140;Dbxref=Genbank:WP_223966128.1;Name=WP_223966128.1;Ontology_term=GO:0042545,GO:0046919;gbkey=CDS;gene=csaB;go_function=pyruvyltransferase activity|0046919||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629977.1;locus_tag=LDO09_RS03140;product=polysaccharide pyruvyl transferase CsaB;protein_id=WP_223966128.1;transl_table=11 NZ_AP024926.1 RefSeq gene 576821 578521 . - . ID=gene-LDO09_RS03145;Name=LDO09_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03145;old_locus_tag=TthAA11_06110 NZ_AP024926.1 Protein Homology CDS 576821 578521 . - 0 ID=cds-WP_223968879.1;Parent=gene-LDO09_RS03145;Dbxref=Genbank:WP_223968879.1;Name=WP_223968879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631916.1;locus_tag=LDO09_RS03145;product=DUF5693 family protein;protein_id=WP_223968879.1;transl_table=11 NZ_AP024926.1 RefSeq gene 578518 579153 . - . ID=gene-LDO09_RS03150;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=LDO09_RS03150;old_locus_tag=TthAA11_06120 NZ_AP024926.1 Protein Homology CDS 578518 579153 . - 0 ID=cds-WP_011172663.1;Parent=gene-LDO09_RS03150;Dbxref=Genbank:WP_011172663.1;Name=WP_011172663.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172663.1;locus_tag=LDO09_RS03150;product=uridine kinase;protein_id=WP_011172663.1;transl_table=11 NZ_AP024926.1 RefSeq gene 579207 580337 . - . ID=gene-LDO09_RS03155;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=LDO09_RS03155;old_locus_tag=TthAA11_06130 NZ_AP024926.1 Protein Homology CDS 579207 580337 . - 0 ID=cds-WP_143584918.1;Parent=gene-LDO09_RS03155;Dbxref=Genbank:WP_143584918.1;Name=WP_143584918.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717315.1;locus_tag=LDO09_RS03155;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_143584918.1;transl_table=11 NZ_AP024926.1 RefSeq gene 580402 581244 . - . ID=gene-LDO09_RS03160;Name=LDO09_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03160;old_locus_tag=TthAA11_06140 NZ_AP024926.1 Protein Homology CDS 580402 581244 . - 0 ID=cds-WP_143584920.1;Parent=gene-LDO09_RS03160;Dbxref=Genbank:WP_143584920.1;Name=WP_143584920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510013.1;locus_tag=LDO09_RS03160;product=hypothetical protein;protein_id=WP_143584920.1;transl_table=11 NZ_AP024926.1 RefSeq gene 581292 582350 . + . ID=gene-LDO09_RS03165;Name=LDO09_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03165;old_locus_tag=TthAA11_06150 NZ_AP024926.1 Protein Homology CDS 581292 582350 . + 0 ID=cds-WP_143584922.1;Parent=gene-LDO09_RS03165;Dbxref=Genbank:WP_143584922.1;Name=WP_143584922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228041.1;locus_tag=LDO09_RS03165;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_143584922.1;transl_table=11 NZ_AP024926.1 RefSeq gene 582313 582903 . - . ID=gene-LDO09_RS03170;Name=LDO09_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03170;old_locus_tag=TthAA11_06160 NZ_AP024926.1 Protein Homology CDS 582313 582903 . - 0 ID=cds-WP_014629972.1;Parent=gene-LDO09_RS03170;Dbxref=Genbank:WP_014629972.1;Name=WP_014629972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228042.1;locus_tag=LDO09_RS03170;product=TIGR01440 family protein;protein_id=WP_014629972.1;transl_table=11 NZ_AP024926.1 RefSeq gene 583001 583417 . + . ID=gene-LDO09_RS03175;Name=LDO09_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03175;old_locus_tag=TthAA11_06170 NZ_AP024926.1 Protein Homology CDS 583001 583417 . + 0 ID=cds-WP_223968881.1;Parent=gene-LDO09_RS03175;Dbxref=Genbank:WP_223968881.1;Name=WP_223968881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013158937.1;locus_tag=LDO09_RS03175;product=hypothetical protein;protein_id=WP_223968881.1;transl_table=11 NZ_AP024926.1 RefSeq gene 583759 584397 . - . ID=gene-LDO09_RS03185;Name=LDO09_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03185;old_locus_tag=TthAA11_06190 NZ_AP024926.1 GeneMarkS-2+ CDS 583759 584397 . - 0 ID=cds-WP_143584928.1;Parent=gene-LDO09_RS03185;Dbxref=Genbank:WP_143584928.1;Name=WP_143584928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS03185;product=zf-HC2 domain-containing protein;protein_id=WP_143584928.1;transl_table=11 NZ_AP024926.1 RefSeq gene 584398 584835 . - . ID=gene-LDO09_RS03190;Name=LDO09_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03190;old_locus_tag=TthAA11_06200 NZ_AP024926.1 Protein Homology CDS 584398 584835 . - 0 ID=cds-WP_267461189.1;Parent=gene-LDO09_RS03190;Dbxref=Genbank:WP_267461189.1;Name=WP_267461189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586493.1;locus_tag=LDO09_RS03190;product=RNA polymerase sigma factor;protein_id=WP_267461189.1;transl_table=11 NZ_AP024926.1 RefSeq gene 585262 586431 . + . ID=gene-LDO09_RS03195;Name=LDO09_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03195;old_locus_tag=TthAA11_06210 NZ_AP024926.1 Protein Homology CDS 585262 586431 . + 0 ID=cds-WP_223966135.1;Parent=gene-LDO09_RS03195;Dbxref=Genbank:WP_223966135.1;Name=WP_223966135.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012371.2;locus_tag=LDO09_RS03195;product=serine hydrolase domain-containing protein;protein_id=WP_223966135.1;transl_table=11 NZ_AP024926.1 RefSeq gene 586428 587495 . - . ID=gene-LDO09_RS03200;Name=LDO09_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03200;old_locus_tag=TthAA11_06220 NZ_AP024926.1 Protein Homology CDS 586428 587495 . - 0 ID=cds-WP_143584935.1;Parent=gene-LDO09_RS03200;Dbxref=Genbank:WP_143584935.1;Name=WP_143584935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003045415.1;locus_tag=LDO09_RS03200;product=branched-chain amino acid ABC transporter permease;protein_id=WP_143584935.1;transl_table=11 NZ_AP024926.1 RefSeq gene 587497 589350 . - . ID=gene-LDO09_RS03205;Name=LDO09_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03205;old_locus_tag=TthAA11_06230 NZ_AP024926.1 Protein Homology CDS 587497 589350 . - 0 ID=cds-WP_223968885.1;Parent=gene-LDO09_RS03205;Dbxref=Genbank:WP_223968885.1;Name=WP_223968885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716854.1;locus_tag=LDO09_RS03205;product=AMP-binding protein;protein_id=WP_223968885.1;transl_table=11 NZ_AP024926.1 RefSeq gene 589357 590106 . - . ID=gene-LDO09_RS03210;Name=LDO09_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03210;old_locus_tag=TthAA11_06240 NZ_AP024926.1 Protein Homology CDS 589357 590106 . - 0 ID=cds-WP_223968887.1;Parent=gene-LDO09_RS03210;Dbxref=Genbank:WP_223968887.1;Name=WP_223968887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228046.1;locus_tag=LDO09_RS03210;product=ABC transporter ATP-binding protein;protein_id=WP_223968887.1;transl_table=11 NZ_AP024926.1 RefSeq gene 590097 590873 . - . ID=gene-LDO09_RS03215;Name=LDO09_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03215;old_locus_tag=TthAA11_06250 NZ_AP024926.1 Protein Homology CDS 590097 590873 . - 0 ID=cds-WP_124104809.1;Parent=gene-LDO09_RS03215;Dbxref=Genbank:WP_124104809.1;Name=WP_124104809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111646.1;locus_tag=LDO09_RS03215;product=ABC transporter ATP-binding protein;protein_id=WP_124104809.1;transl_table=11 NZ_AP024926.1 RefSeq gene 590873 591748 . - . ID=gene-LDO09_RS03220;Name=LDO09_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03220;old_locus_tag=TthAA11_06260 NZ_AP024926.1 Protein Homology CDS 590873 591748 . - 0 ID=cds-WP_143584942.1;Parent=gene-LDO09_RS03220;Dbxref=Genbank:WP_143584942.1;Name=WP_143584942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172673.1;locus_tag=LDO09_RS03220;product=branched-chain amino acid ABC transporter permease;protein_id=WP_143584942.1;transl_table=11 NZ_AP024926.1 RefSeq gene 591777 592961 . - . ID=gene-LDO09_RS03225;Name=LDO09_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03225;old_locus_tag=TthAA11_06270 NZ_AP024926.1 Protein Homology CDS 591777 592961 . - 0 ID=cds-WP_143584943.1;Parent=gene-LDO09_RS03225;Dbxref=Genbank:WP_143584943.1;Name=WP_143584943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631932.1;locus_tag=LDO09_RS03225;product=ABC transporter substrate-binding protein;protein_id=WP_143584943.1;transl_table=11 NZ_AP024926.1 RefSeq gene 593141 593296 . - . ID=gene-LDO09_RS03230;Name=LDO09_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03230;old_locus_tag=TthAA11_06280 NZ_AP024926.1 GeneMarkS-2+ CDS 593141 593296 . - 0 ID=cds-WP_172619144.1;Parent=gene-LDO09_RS03230;Dbxref=Genbank:WP_172619144.1;Name=WP_172619144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS03230;product=hypothetical protein;protein_id=WP_172619144.1;transl_table=11 NZ_AP024926.1 RefSeq gene 593330 594262 . - . ID=gene-LDO09_RS03235;Name=LDO09_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03235;old_locus_tag=TthAA11_06290 NZ_AP024926.1 Protein Homology CDS 593330 594262 . - 0 ID=cds-WP_143584945.1;Parent=gene-LDO09_RS03235;Dbxref=Genbank:WP_143584945.1;Name=WP_143584945.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048249.1;locus_tag=LDO09_RS03235;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_143584945.1;transl_table=11 NZ_AP024926.1 RefSeq gene 594311 594508 . + . ID=gene-LDO09_RS03240;Name=LDO09_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03240;old_locus_tag=TthAA11_06300 NZ_AP024926.1 Protein Homology CDS 594311 594508 . + 0 ID=cds-WP_008631936.1;Parent=gene-LDO09_RS03240;Dbxref=Genbank:WP_008631936.1;Name=WP_008631936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629964.1;locus_tag=LDO09_RS03240;product=hypothetical protein;protein_id=WP_008631936.1;transl_table=11 NZ_AP024926.1 RefSeq gene 594509 595075 . - . ID=gene-LDO09_RS03245;Name=LDO09_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03245;old_locus_tag=TthAA11_06310 NZ_AP024926.1 Protein Homology CDS 594509 595075 . - 0 ID=cds-WP_143584947.1;Parent=gene-LDO09_RS03245;Dbxref=Genbank:WP_143584947.1;Name=WP_143584947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629963.1;locus_tag=LDO09_RS03245;product=thioredoxin family protein;protein_id=WP_143584947.1;transl_table=11 NZ_AP024926.1 RefSeq gene 595126 596202 . + . ID=gene-LDO09_RS03250;Name=LDO09_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03250;old_locus_tag=TthAA11_06320 NZ_AP024926.1 Protein Homology CDS 595126 596202 . + 0 ID=cds-WP_014629962.1;Parent=gene-LDO09_RS03250;Dbxref=Genbank:WP_014629962.1;Name=WP_014629962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631952.1;locus_tag=LDO09_RS03250;product=TRAP transporter substrate-binding protein;protein_id=WP_014629962.1;transl_table=11 NZ_AP024926.1 RefSeq gene 596199 597242 . - . ID=gene-LDO09_RS03255;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=LDO09_RS03255;old_locus_tag=TthAA11_06330 NZ_AP024926.1 Protein Homology CDS 596199 597242 . - 0 ID=cds-WP_223966144.1;Parent=gene-LDO09_RS03255;Dbxref=Genbank:WP_223966144.1;Name=WP_223966144.1;Ontology_term=GO:0006012,GO:0004335;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629961.1;locus_tag=LDO09_RS03255;product=galactokinase;protein_id=WP_223966144.1;transl_table=11 NZ_AP024926.1 RefSeq gene 597250 598095 . - . ID=gene-LDO09_RS03260;Name=LDO09_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03260;old_locus_tag=TthAA11_06340 NZ_AP024926.1 Protein Homology CDS 597250 598095 . - 0 ID=cds-WP_143584949.1;Parent=gene-LDO09_RS03260;Dbxref=Genbank:WP_143584949.1;Name=WP_143584949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172680.1;locus_tag=LDO09_RS03260;product=metal ABC transporter substrate-binding protein;protein_id=WP_143584949.1;transl_table=11 NZ_AP024926.1 RefSeq gene 598184 599845 . + . ID=gene-LDO09_RS03265;Name=LDO09_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03265;old_locus_tag=TthAA11_06350 NZ_AP024926.1 Protein Homology CDS 598184 599845 . + 0 ID=cds-WP_223968890.1;Parent=gene-LDO09_RS03265;Dbxref=Genbank:WP_223968890.1;Name=WP_223968890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629959.1;locus_tag=LDO09_RS03265;product=ABC-ATPase domain-containing protein;protein_id=WP_223968890.1;transl_table=11 NZ_AP024926.1 RefSeq gene 599878 601323 . - . ID=gene-LDO09_RS03270;Name=LDO09_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03270;old_locus_tag=TthAA11_06360 NZ_AP024926.1 Protein Homology CDS 599878 601323 . - 0 ID=cds-WP_143584954.1;Parent=gene-LDO09_RS03270;Dbxref=Genbank:WP_143584954.1;Name=WP_143584954.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510025.1;locus_tag=LDO09_RS03270;product=chloride channel protein;protein_id=WP_143584954.1;transl_table=11 NZ_AP024926.1 RefSeq gene 601307 602680 . - . ID=gene-LDO09_RS03275;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=LDO09_RS03275;old_locus_tag=TthAA11_06370 NZ_AP024926.1 Protein Homology CDS 601307 602680 . - 0 ID=cds-WP_143584956.1;Parent=gene-LDO09_RS03275;Dbxref=Genbank:WP_143584956.1;Name=WP_143584956.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemG;go_function=oxygen-dependent protoporphyrinogen oxidase activity|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172683.1;locus_tag=LDO09_RS03275;product=protoporphyrinogen oxidase;protein_id=WP_143584956.1;transl_table=11 NZ_AP024926.1 RefSeq gene 602668 603621 . - . ID=gene-LDO09_RS03280;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LDO09_RS03280;old_locus_tag=TthAA11_06380 NZ_AP024926.1 Protein Homology CDS 602668 603621 . - 0 ID=cds-WP_014629956.1;Parent=gene-LDO09_RS03280;Dbxref=Genbank:WP_014629956.1;Name=WP_014629956.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629956.1;locus_tag=LDO09_RS03280;product=ferrochelatase;protein_id=WP_014629956.1;transl_table=11 NZ_AP024926.1 RefSeq gene 603618 604643 . - . ID=gene-LDO09_RS03285;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LDO09_RS03285;old_locus_tag=TthAA11_06390 NZ_AP024926.1 Protein Homology CDS 603618 604643 . - 0 ID=cds-WP_143584958.1;Parent=gene-LDO09_RS03285;Dbxref=Genbank:WP_143584958.1;Name=WP_143584958.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631963.1;locus_tag=LDO09_RS03285;product=uroporphyrinogen decarboxylase;protein_id=WP_143584958.1;transl_table=11 NZ_AP024926.1 RefSeq gene 604657 605583 . + . ID=gene-LDO09_RS03290;Name=LDO09_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03290;old_locus_tag=TthAA11_06400 NZ_AP024926.1 Protein Homology CDS 604657 605583 . + 0 ID=cds-WP_267461190.1;Parent=gene-LDO09_RS03290;Dbxref=Genbank:WP_267461190.1;Name=WP_267461190.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629954.1;locus_tag=LDO09_RS03290;product=peptidylprolyl isomerase;protein_id=WP_267461190.1;transl_table=11 NZ_AP024926.1 RefSeq gene 605566 606414 . - . ID=gene-LDO09_RS03295;Name=LDO09_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03295;old_locus_tag=TthAA11_06410 NZ_AP024926.1 Protein Homology CDS 605566 606414 . - 0 ID=cds-WP_223966154.1;Parent=gene-LDO09_RS03295;Dbxref=Genbank:WP_223966154.1;Name=WP_223966154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629953.1;locus_tag=LDO09_RS03295;product=carbon-nitrogen hydrolase family protein;protein_id=WP_223966154.1;transl_table=11 NZ_AP024926.1 RefSeq gene 606417 607178 . - . ID=gene-LDO09_RS03300;Name=LDO09_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03300;old_locus_tag=TthAA11_06420 NZ_AP024926.1 Protein Homology CDS 606417 607178 . - 0 ID=cds-WP_223968892.1;Parent=gene-LDO09_RS03300;Dbxref=Genbank:WP_223968892.1;Name=WP_223968892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229260.1;locus_tag=LDO09_RS03300;product=SDR family oxidoreductase;protein_id=WP_223968892.1;transl_table=11 NZ_AP024926.1 RefSeq gene 607181 608797 . - . ID=gene-LDO09_RS03305;Name=LDO09_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03305;old_locus_tag=TthAA11_06430 NZ_AP024926.1 Protein Homology CDS 607181 608797 . - 0 ID=cds-WP_172619171.1;Parent=gene-LDO09_RS03305;Dbxref=Genbank:WP_172619171.1;Name=WP_172619171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629951.1;locus_tag=LDO09_RS03305;product=long-chain fatty acid--CoA ligase;protein_id=WP_172619171.1;transl_table=11 NZ_AP024926.1 RefSeq gene 608835 609290 . - . ID=gene-LDO09_RS03310;Name=LDO09_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03310;old_locus_tag=TthAA11_06440 NZ_AP024926.1 Protein Homology CDS 608835 609290 . - 0 ID=cds-WP_014629950.1;Parent=gene-LDO09_RS03310;Dbxref=Genbank:WP_014629950.1;Name=WP_014629950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631972.1;locus_tag=LDO09_RS03310;product=MaoC/PaaZ C-terminal domain-containing protein;protein_id=WP_014629950.1;transl_table=11 NZ_AP024926.1 RefSeq gene 609303 610439 . - . ID=gene-LDO09_RS03315;Name=LDO09_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03315;old_locus_tag=TthAA11_06450 NZ_AP024926.1 Protein Homology CDS 609303 610439 . - 0 ID=cds-WP_143584966.1;Parent=gene-LDO09_RS03315;Dbxref=Genbank:WP_143584966.1;Name=WP_143584966.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172691.1;locus_tag=LDO09_RS03315;product=acyl-CoA dehydrogenase family protein;protein_id=WP_143584966.1;transl_table=11 NZ_AP024926.1 RefSeq gene 610426 611001 . - . ID=gene-LDO09_RS03320;Name=LDO09_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03320;old_locus_tag=TthAA11_06460 NZ_AP024926.1 Protein Homology CDS 610426 611001 . - 0 ID=cds-WP_143584968.1;Parent=gene-LDO09_RS03320;Dbxref=Genbank:WP_143584968.1;Name=WP_143584968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229253.1;locus_tag=LDO09_RS03320;product=TetR/AcrR family transcriptional regulator;protein_id=WP_143584968.1;transl_table=11 NZ_AP024926.1 RefSeq gene 611052 611909 . - . ID=gene-LDO09_RS03325;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LDO09_RS03325;old_locus_tag=TthAA11_06470 NZ_AP024926.1 Protein Homology CDS 611052 611909 . - 0 ID=cds-WP_223968910.1;Parent=gene-LDO09_RS03325;Dbxref=Genbank:WP_223968910.1;Name=WP_223968910.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629947.1;locus_tag=LDO09_RS03325;product=putative 4-hydroxybenzoate polyprenyltransferase;protein_id=WP_223968910.1;transl_table=11 NZ_AP024926.1 RefSeq gene 611936 612286 . - . ID=gene-LDO09_RS03330;Name=LDO09_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03330;old_locus_tag=TthAA11_06480 NZ_AP024926.1 Protein Homology CDS 611936 612286 . - 0 ID=cds-WP_011172694.1;Parent=gene-LDO09_RS03330;Dbxref=Genbank:WP_011172694.1;Name=WP_011172694.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510033.1;locus_tag=LDO09_RS03330;product=aspartate 1-decarboxylase;protein_id=WP_011172694.1;transl_table=11 NZ_AP024926.1 RefSeq gene 612346 613884 . - . ID=gene-LDO09_RS03335;Name=LDO09_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03335;old_locus_tag=TthAA11_06490 NZ_AP024926.1 Protein Homology CDS 612346 613884 . - 0 ID=cds-WP_223968913.1;Parent=gene-LDO09_RS03335;Dbxref=Genbank:WP_223968913.1;Name=WP_223968913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550128.1;locus_tag=LDO09_RS03335;product=NFACT family protein;protein_id=WP_223968913.1;transl_table=11 NZ_AP024926.1 RefSeq gene 613869 614636 . - . ID=gene-LDO09_RS03340;Name=trmI;gbkey=Gene;gene=trmI;gene_biotype=protein_coding;locus_tag=LDO09_RS03340;old_locus_tag=TthAA11_06500 NZ_AP024926.1 Protein Homology CDS 613869 614636 . - 0 ID=cds-WP_143584974.1;Parent=gene-LDO09_RS03340;Dbxref=Genbank:WP_143584974.1;Name=WP_143584974.1;gbkey=CDS;gene=trmI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172697.1;locus_tag=LDO09_RS03340;product=tRNA (adenine(58)-N(1))-methyltransferase TrmI;protein_id=WP_143584974.1;transl_table=11 NZ_AP024926.1 RefSeq gene 614657 615520 . - . ID=gene-LDO09_RS03345;Name=LDO09_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03345;old_locus_tag=TthAA11_06510 NZ_AP024926.1 Protein Homology CDS 614657 615520 . - 0 ID=cds-WP_223966166.1;Parent=gene-LDO09_RS03345;Dbxref=Genbank:WP_223966166.1;Name=WP_223966166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172698.1;locus_tag=LDO09_RS03345;product=thioredoxin domain-containing protein;protein_id=WP_223966166.1;transl_table=11 NZ_AP024926.1 RefSeq gene 615517 615846 . - . ID=gene-LDO09_RS03350;Name=LDO09_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03350;old_locus_tag=TthAA11_06520 NZ_AP024926.1 Protein Homology CDS 615517 615846 . - 0 ID=cds-WP_008631989.1;Parent=gene-LDO09_RS03350;Dbxref=Genbank:WP_008631989.1;Name=WP_008631989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515477.1;locus_tag=LDO09_RS03350;product=cyclic-di-AMP receptor;protein_id=WP_008631989.1;transl_table=11 NZ_AP024926.1 RefSeq gene 615903 618989 . - . ID=gene-LDO09_RS03355;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LDO09_RS03355;old_locus_tag=TthAA11_06530 NZ_AP024926.1 Protein Homology CDS 615903 618989 . - 0 ID=cds-WP_223966175.1;Parent=gene-LDO09_RS03355;Dbxref=Genbank:WP_223966175.1;Name=WP_223966175.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629942.1;locus_tag=LDO09_RS03355;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_223966175.1;transl_table=11 NZ_AP024926.1 RefSeq gene 619110 619394 . + . ID=gene-LDO09_RS03360;Name=LDO09_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03360;old_locus_tag=TthAA11_06540 NZ_AP024926.1 Protein Homology CDS 619110 619394 . + 0 ID=cds-WP_008631991.1;Parent=gene-LDO09_RS03360;Dbxref=Genbank:WP_008631991.1;Name=WP_008631991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631991.1;locus_tag=LDO09_RS03360;product=rhodanese-like domain-containing protein;protein_id=WP_008631991.1;transl_table=11 NZ_AP024926.1 RefSeq gene 619423 619499 . + . ID=gene-LDO09_RS03365;Name=LDO09_RS03365;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS03365;old_locus_tag=TthAA11_t00220 NZ_AP024926.1 tRNAscan-SE tRNA 619423 619499 . + . ID=rna-LDO09_RS03365;Parent=gene-LDO09_RS03365;anticodon=(pos:619457..619459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS03365;product=tRNA-His NZ_AP024926.1 tRNAscan-SE exon 619423 619499 . + . ID=exon-LDO09_RS03365-1;Parent=rna-LDO09_RS03365;anticodon=(pos:619457..619459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS03365;product=tRNA-His NZ_AP024926.1 RefSeq gene 619549 619633 . + . ID=gene-LDO09_RS03370;Name=LDO09_RS03370;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS03370;old_locus_tag=TthAA11_t00230 NZ_AP024926.1 tRNAscan-SE tRNA 619549 619633 . + . ID=rna-LDO09_RS03370;Parent=gene-LDO09_RS03370;anticodon=(pos:619583..619585);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS03370;product=tRNA-Leu NZ_AP024926.1 tRNAscan-SE exon 619549 619633 . + . ID=exon-LDO09_RS03370-1;Parent=rna-LDO09_RS03370;anticodon=(pos:619583..619585);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS03370;product=tRNA-Leu NZ_AP024926.1 RefSeq gene 619671 620885 . + . ID=gene-LDO09_RS03375;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LDO09_RS03375;old_locus_tag=TthAA11_06550 NZ_AP024926.1 Protein Homology CDS 619671 620885 . + 0 ID=cds-WP_223968916.1;Parent=gene-LDO09_RS03375;Dbxref=Genbank:WP_223968916.1;Name=WP_223968916.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172700.1;locus_tag=LDO09_RS03375;product=trigger factor;protein_id=WP_223968916.1;transl_table=11 NZ_AP024926.1 RefSeq gene 620951 621535 . + . ID=gene-LDO09_RS03380;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LDO09_RS03380;old_locus_tag=TthAA11_06560 NZ_AP024926.1 Protein Homology CDS 620951 621535 . + 0 ID=cds-WP_008631995.1;Parent=gene-LDO09_RS03380;Dbxref=Genbank:WP_008631995.1;Name=WP_008631995.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329568.1;locus_tag=LDO09_RS03380;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_008631995.1;transl_table=11 NZ_AP024926.1 RefSeq gene 621522 622721 . + . ID=gene-LDO09_RS03385;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LDO09_RS03385;old_locus_tag=TthAA11_06570 NZ_AP024926.1 Protein Homology CDS 621522 622721 . + 0 ID=cds-WP_165738774.1;Parent=gene-LDO09_RS03385;Dbxref=Genbank:WP_165738774.1;Name=WP_165738774.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631997.1;locus_tag=LDO09_RS03385;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_165738774.1;transl_table=11 NZ_AP024926.1 RefSeq gene 622748 624268 . - . ID=gene-LDO09_RS03390;Name=LDO09_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03390;old_locus_tag=TthAA11_06580 NZ_AP024926.1 Protein Homology CDS 622748 624268 . - 0 ID=cds-WP_011172703.1;Parent=gene-LDO09_RS03390;Dbxref=Genbank:WP_011172703.1;Name=WP_011172703.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228072.1;locus_tag=LDO09_RS03390;product=nicotinate phosphoribosyltransferase;protein_id=WP_011172703.1;transl_table=11 NZ_AP024926.1 RefSeq gene 624311 627868 . + . ID=gene-LDO09_RS03395;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=LDO09_RS03395;old_locus_tag=TthAA11_06590 NZ_AP024926.1 Protein Homology CDS 624311 627868 . + 0 ID=cds-WP_223968919.1;Parent=gene-LDO09_RS03395;Dbxref=Genbank:WP_223968919.1;Name=WP_223968919.1;Ontology_term=GO:0009086,GO:0008705;gbkey=CDS;gene=metH;go_function=methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629938.1;locus_tag=LDO09_RS03395;product=methionine synthase;protein_id=WP_223968919.1;transl_table=11 NZ_AP024926.1 RefSeq gene 627942 629804 . + . ID=gene-LDO09_RS03400;Name=LDO09_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03400;old_locus_tag=TthAA11_06600 NZ_AP024926.1 Protein Homology CDS 627942 629804 . + 0 ID=cds-WP_223968923.1;Parent=gene-LDO09_RS03400;Dbxref=Genbank:WP_223968923.1;Name=WP_223968923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631999.1;locus_tag=LDO09_RS03400;product=chorismate-binding protein;protein_id=WP_223968923.1;transl_table=11 NZ_AP024926.1 RefSeq gene 629801 630541 . + . ID=gene-LDO09_RS03405;Name=LDO09_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03405;old_locus_tag=TthAA11_06610 NZ_AP024926.1 Protein Homology CDS 629801 630541 . + 0 ID=cds-WP_223968926.1;Parent=gene-LDO09_RS03405;Dbxref=Genbank:WP_223968926.1;Name=WP_223968926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172707.1;locus_tag=LDO09_RS03405;product=aminotransferase class IV;protein_id=WP_223968926.1;transl_table=11 NZ_AP024926.1 RefSeq gene 630599 631066 . + . ID=gene-LDO09_RS03410;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LDO09_RS03410;old_locus_tag=TthAA11_06620 NZ_AP024926.1 Protein Homology CDS 630599 631066 . + 0 ID=cds-WP_143584991.1;Parent=gene-LDO09_RS03410;Dbxref=Genbank:WP_143584991.1;Name=WP_143584991.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003045750.1;locus_tag=LDO09_RS03410;product=transcription elongation factor GreA;protein_id=WP_143584991.1;transl_table=11 NZ_AP024926.1 RefSeq gene 631053 631718 . - . ID=gene-LDO09_RS03415;Name=LDO09_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03415;old_locus_tag=TthAA11_06630 NZ_AP024926.1 Protein Homology CDS 631053 631718 . - 0 ID=cds-WP_014510042.1;Parent=gene-LDO09_RS03415;Dbxref=Genbank:WP_014510042.1;Name=WP_014510042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510042.1;locus_tag=LDO09_RS03415;product=recombination protein O N-terminal domain-containing protein;protein_id=WP_014510042.1;transl_table=11 NZ_AP024926.1 RefSeq gene 631741 631971 . + . ID=gene-LDO09_RS03420;Name=LDO09_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03420;old_locus_tag=TthAA11_06640 NZ_AP024926.1 Protein Homology CDS 631741 631971 . + 0 ID=cds-WP_223968930.1;Parent=gene-LDO09_RS03420;Dbxref=Genbank:WP_223968930.1;Name=WP_223968930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510043.1;locus_tag=LDO09_RS03420;product=hypothetical protein;protein_id=WP_223968930.1;transl_table=11 NZ_AP024926.1 RefSeq gene 632066 632221 . + . ID=gene-LDO09_RS03425;Name=LDO09_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03425;old_locus_tag=TthAA11_06650 NZ_AP024926.1 GeneMarkS-2+ CDS 632066 632221 . + 0 ID=cds-WP_223968932.1;Parent=gene-LDO09_RS03425;Dbxref=Genbank:WP_223968932.1;Name=WP_223968932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS03425;product=hypothetical protein;protein_id=WP_223968932.1;transl_table=11 NZ_AP024926.1 RefSeq gene 632258 633016 . + . ID=gene-LDO09_RS03430;Name=LDO09_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03430;old_locus_tag=TthAA11_06660 NZ_AP024926.1 Protein Homology CDS 632258 633016 . + 0 ID=cds-WP_143584994.1;Parent=gene-LDO09_RS03430;Dbxref=Genbank:WP_143584994.1;Name=WP_143584994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515491.1;locus_tag=LDO09_RS03430;product=TIGR00282 family metallophosphoesterase;protein_id=WP_143584994.1;transl_table=11 NZ_AP024926.1 RefSeq gene 633013 635589 . + . ID=gene-LDO09_RS03435;Name=LDO09_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03435;old_locus_tag=TthAA11_06670 NZ_AP024926.1 Protein Homology CDS 633013 635589 . + 0 ID=cds-WP_143584995.1;Parent=gene-LDO09_RS03435;Dbxref=Genbank:WP_143584995.1;Name=WP_143584995.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632006.1;locus_tag=LDO09_RS03435;product=phosphoenolpyruvate carboxylase;protein_id=WP_143584995.1;transl_table=11 NZ_AP024926.1 RefSeq gene 635971 636639 . + . ID=gene-LDO09_RS03440;Name=LDO09_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03440;old_locus_tag=TthAA11_06680 NZ_AP024926.1 GeneMarkS-2+ CDS 635971 636639 . + 0 ID=cds-WP_223968934.1;Parent=gene-LDO09_RS03440;Dbxref=Genbank:WP_223968934.1;Name=WP_223968934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS03440;product=hypothetical protein;protein_id=WP_223968934.1;transl_table=11 NZ_AP024926.1 RefSeq gene 636719 636925 . + . ID=gene-LDO09_RS03445;Name=LDO09_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03445;old_locus_tag=TthAA11_06690 NZ_AP024926.1 Protein Homology CDS 636719 636925 . + 0 ID=cds-WP_028493324.1;Parent=gene-LDO09_RS03445;Dbxref=Genbank:WP_028493324.1;Name=WP_028493324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631012.1;locus_tag=LDO09_RS03445;product=helix-turn-helix domain-containing protein;protein_id=WP_028493324.1;transl_table=11 NZ_AP024926.1 RefSeq gene 636935 637123 . + . ID=gene-LDO09_RS03450;Name=LDO09_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03450;old_locus_tag=TthAA11_06700 NZ_AP024926.1 Protein Homology CDS 636935 637123 . + 0 ID=cds-WP_223968936.1;Parent=gene-LDO09_RS03450;Dbxref=Genbank:WP_223968936.1;Name=WP_223968936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173099.1;locus_tag=LDO09_RS03450;product=hypothetical protein;protein_id=WP_223968936.1;transl_table=11 NZ_AP024926.1 RefSeq gene 637110 637991 . + . ID=gene-LDO09_RS03455;Name=LDO09_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03455;old_locus_tag=TthAA11_06710 NZ_AP024926.1 Protein Homology CDS 637110 637991 . + 0 ID=cds-WP_223968938.1;Parent=gene-LDO09_RS03455;Dbxref=Genbank:WP_223968938.1;Name=WP_223968938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510339.1;locus_tag=LDO09_RS03455;product=bifunctional DNA primase/polymerase;protein_id=WP_223968938.1;transl_table=11 NZ_AP024926.1 RefSeq gene 637988 639769 . + . ID=gene-LDO09_RS03460;Name=LDO09_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03460;old_locus_tag=TthAA11_06720 NZ_AP024926.1 Protein Homology CDS 637988 639769 . + 0 ID=cds-WP_223968940.1;Parent=gene-LDO09_RS03460;Dbxref=Genbank:WP_223968940.1;Name=WP_223968940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173101.1;locus_tag=LDO09_RS03460;product=hypothetical protein;protein_id=WP_223968940.1;transl_table=11 NZ_AP024926.1 RefSeq gene 639766 640101 . + . ID=gene-LDO09_RS03465;Name=LDO09_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03465;old_locus_tag=TthAA11_06730 NZ_AP024926.1 Protein Homology CDS 639766 640101 . + 0 ID=cds-WP_223968942.1;Parent=gene-LDO09_RS03465;Dbxref=Genbank:WP_223968942.1;Name=WP_223968942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510341.1;locus_tag=LDO09_RS03465;product=hypothetical protein;protein_id=WP_223968942.1;transl_table=11 NZ_AP024926.1 RefSeq gene 640410 640976 . + . ID=gene-LDO09_RS03470;Name=LDO09_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03470;old_locus_tag=TthAA11_06740 NZ_AP024926.1 Protein Homology CDS 640410 640976 . + 0 ID=cds-WP_028493320.1;Parent=gene-LDO09_RS03470;Dbxref=Genbank:WP_028493320.1;Name=WP_028493320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328330.1;locus_tag=LDO09_RS03470;product=hypothetical protein;protein_id=WP_028493320.1;transl_table=11 NZ_AP024926.1 RefSeq gene 640942 641079 . + . ID=gene-LDO09_RS03475;Name=LDO09_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03475;old_locus_tag=TthAA11_06750 NZ_AP024926.1 GeneMarkS-2+ CDS 640942 641079 . + 0 ID=cds-WP_223968944.1;Parent=gene-LDO09_RS03475;Dbxref=Genbank:WP_223968944.1;Name=WP_223968944.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS03475;product=hypothetical protein;protein_id=WP_223968944.1;transl_table=11 NZ_AP024926.1 RefSeq gene 641277 641996 . - . ID=gene-LDO09_RS03480;Name=LDO09_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03480;old_locus_tag=TthAA11_06760 NZ_AP024926.1 Protein Homology CDS 641277 641996 . - 0 ID=cds-WP_223968946.1;Parent=gene-LDO09_RS03480;Dbxref=Genbank:WP_223968946.1;Name=WP_223968946.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013755.2;locus_tag=LDO09_RS03480;product=hypothetical protein;protein_id=WP_223968946.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 642322 642744 . - . ID=gene-LDO09_RS03485;Name=LDO09_RS03485;end_range=642744,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS03485;old_locus_tag=TthAA11_06780;partial=true;pseudo=true NZ_AP024926.1 Protein Homology CDS 642322 642744 . - 0 ID=cds-LDO09_RS03485;Parent=gene-LDO09_RS03485;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=642744,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024547.2;locus_tag=LDO09_RS03485;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 642891 644033 . + . ID=gene-LDO09_RS03490;Name=LDO09_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03490;old_locus_tag=TthAA11_06790 NZ_AP024926.1 Protein Homology CDS 642891 644033 . + 0 ID=cds-WP_223968948.1;Parent=gene-LDO09_RS03490;Dbxref=Genbank:WP_223968948.1;Name=WP_223968948.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716911.1;locus_tag=LDO09_RS03490;product=tyrosine-type recombinase/integrase;protein_id=WP_223968948.1;transl_table=11 NZ_AP024926.1 RefSeq gene 644170 644245 . - . ID=gene-LDO09_RS03495;Name=LDO09_RS03495;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS03495;old_locus_tag=TthAA11_t00240 NZ_AP024926.1 tRNAscan-SE tRNA 644170 644245 . - . ID=rna-LDO09_RS03495;Parent=gene-LDO09_RS03495;anticodon=(pos:complement(644210..644212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS03495;product=tRNA-Arg NZ_AP024926.1 tRNAscan-SE exon 644170 644245 . - . ID=exon-LDO09_RS03495-1;Parent=rna-LDO09_RS03495;anticodon=(pos:complement(644210..644212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS03495;product=tRNA-Arg NZ_AP024926.1 RefSeq gene 644281 644357 . - . ID=gene-LDO09_RS03500;Name=LDO09_RS03500;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS03500;old_locus_tag=TthAA11_t00250 NZ_AP024926.1 tRNAscan-SE tRNA 644281 644357 . - . ID=rna-LDO09_RS03500;Parent=gene-LDO09_RS03500;anticodon=(pos:complement(644321..644323));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS03500;product=tRNA-Gly NZ_AP024926.1 tRNAscan-SE exon 644281 644357 . - . ID=exon-LDO09_RS03500-1;Parent=rna-LDO09_RS03500;anticodon=(pos:complement(644321..644323));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS03500;product=tRNA-Gly NZ_AP024926.1 RefSeq gene 644359 644435 . - . ID=gene-LDO09_RS03505;Name=LDO09_RS03505;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS03505;old_locus_tag=TthAA11_t00260 NZ_AP024926.1 tRNAscan-SE tRNA 644359 644435 . - . ID=rna-LDO09_RS03505;Parent=gene-LDO09_RS03505;anticodon=(pos:complement(644399..644401));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS03505;product=tRNA-Pro NZ_AP024926.1 tRNAscan-SE exon 644359 644435 . - . ID=exon-LDO09_RS03505-1;Parent=rna-LDO09_RS03505;anticodon=(pos:complement(644399..644401));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS03505;product=tRNA-Pro NZ_AP024926.1 RefSeq gene 644506 644667 . + . ID=gene-LDO09_RS03510;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=LDO09_RS03510;old_locus_tag=TthAA11_06800 NZ_AP024926.1 Protein Homology CDS 644506 644667 . + 0 ID=cds-WP_011172713.1;Parent=gene-LDO09_RS03510;Dbxref=Genbank:WP_011172713.1;Name=WP_011172713.1;Ontology_term=GO:0015628;gbkey=CDS;gene=tatA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172713.1;locus_tag=LDO09_RS03510;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_011172713.1;transl_table=11 NZ_AP024926.1 RefSeq gene 644664 645731 . - . ID=gene-LDO09_RS03515;Name=LDO09_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03515;old_locus_tag=TthAA11_06810 NZ_AP024926.1 Protein Homology CDS 644664 645731 . - 0 ID=cds-WP_124104783.1;Parent=gene-LDO09_RS03515;Dbxref=Genbank:WP_124104783.1;Name=WP_124104783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172714.1;locus_tag=LDO09_RS03515;product=tetratricopeptide repeat protein;protein_id=WP_124104783.1;transl_table=11 NZ_AP024926.1 RefSeq gene 645751 647001 . - . ID=gene-LDO09_RS03520;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=LDO09_RS03520;old_locus_tag=TthAA11_06820 NZ_AP024926.1 Protein Homology CDS 645751 647001 . - 0 ID=cds-WP_143584997.1;Parent=gene-LDO09_RS03520;Dbxref=Genbank:WP_143584997.1;Name=WP_143584997.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887;gbkey=CDS;gene=hslU;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172715.1;locus_tag=LDO09_RS03520;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_143584997.1;transl_table=11 NZ_AP024926.1 RefSeq gene 646998 647564 . - . ID=gene-LDO09_RS03525;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=LDO09_RS03525;old_locus_tag=TthAA11_06830 NZ_AP024926.1 Protein Homology CDS 646998 647564 . - 0 ID=cds-WP_011228081.1;Parent=gene-LDO09_RS03525;Dbxref=Genbank:WP_011228081.1;Name=WP_011228081.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510047.1;locus_tag=LDO09_RS03525;product=ATP-dependent protease subunit HslV;protein_id=WP_011228081.1;transl_table=11 NZ_AP024926.1 RefSeq gene 647575 647943 . - . ID=gene-LDO09_RS03530;Name=LDO09_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03530;old_locus_tag=TthAA11_06840 NZ_AP024926.1 Protein Homology CDS 647575 647943 . - 0 ID=cds-WP_014629929.1;Parent=gene-LDO09_RS03530;Dbxref=Genbank:WP_014629929.1;Name=WP_014629929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632014.1;locus_tag=LDO09_RS03530;product=nucleotidyltransferase domain-containing protein;protein_id=WP_014629929.1;transl_table=11 NZ_AP024926.1 RefSeq gene 647940 648323 . - . ID=gene-LDO09_RS03535;Name=LDO09_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03535;old_locus_tag=TthAA11_06850 NZ_AP024926.1 Protein Homology CDS 647940 648323 . - 0 ID=cds-WP_011172718.1;Parent=gene-LDO09_RS03535;Dbxref=Genbank:WP_011172718.1;Name=WP_011172718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632015.1;locus_tag=LDO09_RS03535;product=HEPN domain-containing protein;protein_id=WP_011172718.1;transl_table=11 NZ_AP024926.1 RefSeq gene 648397 649791 . + . ID=gene-LDO09_RS03540;Name=LDO09_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03540;old_locus_tag=TthAA11_06860 NZ_AP024926.1 Protein Homology CDS 648397 649791 . + 0 ID=cds-WP_223968950.1;Parent=gene-LDO09_RS03540;Dbxref=Genbank:WP_223968950.1;Name=WP_223968950.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629928.1;locus_tag=LDO09_RS03540;product=sigma 54-interacting transcriptional regulator;protein_id=WP_223968950.1;transl_table=11 NZ_AP024926.1 RefSeq gene 649781 650083 . + . ID=gene-LDO09_RS03545;Name=LDO09_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03545;old_locus_tag=TthAA11_06870 NZ_AP024926.1 Protein Homology CDS 649781 650083 . + 0 ID=cds-WP_223966205.1;Parent=gene-LDO09_RS03545;Dbxref=Genbank:WP_223966205.1;Name=WP_223966205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048388.1;locus_tag=LDO09_RS03545;product=nucleotidyltransferase domain-containing protein;protein_id=WP_223966205.1;transl_table=11 NZ_AP024926.1 RefSeq gene 650068 650454 . + . ID=gene-LDO09_RS03550;Name=LDO09_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03550;old_locus_tag=TthAA11_06880 NZ_AP024926.1 Protein Homology CDS 650068 650454 . + 0 ID=cds-WP_223968952.1;Parent=gene-LDO09_RS03550;Dbxref=Genbank:WP_223968952.1;Name=WP_223968952.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510050.1;locus_tag=LDO09_RS03550;product=HI0074 family nucleotidyltransferase substrate-binding subunit;protein_id=WP_223968952.1;transl_table=11 NZ_AP024926.1 RefSeq gene 650451 651674 . + . ID=gene-LDO09_RS03555;Name=LDO09_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03555;old_locus_tag=TthAA11_06890 NZ_AP024926.1 Protein Homology CDS 650451 651674 . + 0 ID=cds-WP_223968954.1;Parent=gene-LDO09_RS03555;Dbxref=Genbank:WP_223968954.1;Name=WP_223968954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510051.1;locus_tag=LDO09_RS03555;product=VWA domain-containing protein;protein_id=WP_223968954.1;transl_table=11 NZ_AP024926.1 RefSeq gene 651674 651898 . + . ID=gene-LDO09_RS03560;Name=LDO09_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03560;old_locus_tag=TthAA11_06900 NZ_AP024926.1 Protein Homology CDS 651674 651898 . + 0 ID=cds-WP_223966211.1;Parent=gene-LDO09_RS03560;Dbxref=Genbank:WP_223966211.1;Name=WP_223966211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228086.1;locus_tag=LDO09_RS03560;product=hypothetical protein;protein_id=WP_223966211.1;transl_table=11 NZ_AP024926.1 RefSeq gene 651895 652221 . - . ID=gene-LDO09_RS03565;Name=LDO09_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03565;old_locus_tag=TthAA11_06910 NZ_AP024926.1 Protein Homology CDS 651895 652221 . - 0 ID=cds-WP_081490774.1;Parent=gene-LDO09_RS03565;Dbxref=Genbank:WP_081490774.1;Name=WP_081490774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632022.1;locus_tag=LDO09_RS03565;product=nucleotidyltransferase domain-containing protein;protein_id=WP_081490774.1;transl_table=11 NZ_AP024926.1 RefSeq gene 652181 652594 . - . ID=gene-LDO09_RS03570;Name=LDO09_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03570;old_locus_tag=TthAA11_06920 NZ_AP024926.1 Protein Homology CDS 652181 652594 . - 0 ID=cds-WP_008632023.1;Parent=gene-LDO09_RS03570;Dbxref=Genbank:WP_008632023.1;Name=WP_008632023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632023.1;locus_tag=LDO09_RS03570;product=HEPN domain-containing protein;protein_id=WP_008632023.1;transl_table=11 NZ_AP024926.1 RefSeq gene 652591 654483 . - . ID=gene-LDO09_RS03575;Name=LDO09_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03575;old_locus_tag=TthAA11_06930 NZ_AP024926.1 Protein Homology CDS 652591 654483 . - 0 ID=cds-WP_223968956.1;Parent=gene-LDO09_RS03575;Dbxref=Genbank:WP_223968956.1;Name=WP_223968956.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629922.1;locus_tag=LDO09_RS03575;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=WP_223968956.1;transl_table=11 NZ_AP024926.1 RefSeq gene 654501 655841 . - . ID=gene-LDO09_RS03580;Name=wbaP;gbkey=Gene;gene=wbaP;gene_biotype=protein_coding;locus_tag=LDO09_RS03580;old_locus_tag=TthAA11_06940 NZ_AP024926.1 Protein Homology CDS 654501 655841 . - 0 ID=cds-WP_242004655.1;Parent=gene-LDO09_RS03580;Dbxref=Genbank:WP_242004655.1;Name=WP_242004655.1;Ontology_term=GO:0000271,GO:0016740,GO:0016020;gbkey=CDS;gene=wbaP;go_component=membrane|0016020||IEA;go_function=transferase activity|0016740||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629921.1;locus_tag=LDO09_RS03580;product=undecaprenyl-phosphate galactose phosphotransferase WbaP;protein_id=WP_242004655.1;transl_table=11 NZ_AP024926.1 RefSeq gene 655956 657083 . - . ID=gene-LDO09_RS03585;Name=LDO09_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03585;old_locus_tag=TthAA11_06950 NZ_AP024926.1 Protein Homology CDS 655956 657083 . - 0 ID=cds-WP_143585008.1;Parent=gene-LDO09_RS03585;Dbxref=Genbank:WP_143585008.1;Name=WP_143585008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629920.1;locus_tag=LDO09_RS03585;product=glycosyltransferase family 4 protein;protein_id=WP_143585008.1;transl_table=11 NZ_AP024926.1 RefSeq gene 657093 658022 . - . ID=gene-LDO09_RS03590;Name=LDO09_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03590;old_locus_tag=TthAA11_06960 NZ_AP024926.1 Protein Homology CDS 657093 658022 . - 0 ID=cds-WP_267461195.1;Parent=gene-LDO09_RS03590;Dbxref=Genbank:WP_267461195.1;Name=WP_267461195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018466776.1;locus_tag=LDO09_RS03590;product=glycosyltransferase family 1 protein;protein_id=WP_267461195.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 658130 658462 . + . ID=gene-LDO09_RS03595;Name=LDO09_RS03595;end_range=658462,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS03595;old_locus_tag=TthAA11_06970;partial=true;pseudo=true NZ_AP024926.1 Protein Homology CDS 658130 658462 . + 0 ID=cds-LDO09_RS03595;Parent=gene-LDO09_RS03595;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=658462,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1;locus_tag=LDO09_RS03595;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 658464 659564 . - . ID=gene-LDO09_RS03600;Name=LDO09_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03600;old_locus_tag=TthAA11_06980 NZ_AP024926.1 Protein Homology CDS 658464 659564 . - 0 ID=cds-WP_143584933.1;Parent=gene-LDO09_RS03600;Dbxref=Genbank:WP_143584933.1;Name=WP_143584933.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511178.1;locus_tag=LDO09_RS03600;product=transposase;protein_id=WP_143584933.1;transl_table=11 NZ_AP024926.1 RefSeq gene 659757 661016 . - . ID=gene-LDO09_RS03605;Name=LDO09_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03605 NZ_AP024926.1 GeneMarkS-2+ CDS 659757 661016 . - 0 ID=cds-WP_223968958.1;Parent=gene-LDO09_RS03605;Dbxref=Genbank:WP_223968958.1;Name=WP_223968958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS03605;product=hypothetical protein;protein_id=WP_223968958.1;transl_table=11 NZ_AP024926.1 RefSeq gene 661013 662236 . - . ID=gene-LDO09_RS03610;Name=LDO09_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03610 NZ_AP024926.1 Protein Homology CDS 661013 662236 . - 0 ID=cds-WP_223968960.1;Parent=gene-LDO09_RS03610;Dbxref=Genbank:WP_223968960.1;Name=WP_223968960.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024831.2;locus_tag=LDO09_RS03610;product=glycosyltransferase family 4 protein;protein_id=WP_223968960.1;transl_table=11 NZ_AP024926.1 RefSeq gene 662244 663155 . - . ID=gene-LDO09_RS03615;Name=LDO09_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03615;old_locus_tag=TthAA11_07000 NZ_AP024926.1 Protein Homology CDS 662244 663155 . - 0 ID=cds-WP_223968962.1;Parent=gene-LDO09_RS03615;Dbxref=Genbank:WP_223968962.1;Name=WP_223968962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629916.1;locus_tag=LDO09_RS03615;product=glycosyltransferase family 2 protein;protein_id=WP_223968962.1;transl_table=11 NZ_AP024926.1 RefSeq gene 663148 664266 . - . ID=gene-LDO09_RS03620;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=LDO09_RS03620;old_locus_tag=TthAA11_07010 NZ_AP024926.1 Protein Homology CDS 663148 664266 . - 0 ID=cds-WP_223968964.1;Parent=gene-LDO09_RS03620;Dbxref=Genbank:WP_223968964.1;Name=WP_223968964.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228271.1;locus_tag=LDO09_RS03620;product=UDP-galactopyranose mutase;protein_id=WP_223968964.1;transl_table=11 NZ_AP024926.1 RefSeq gene 664256 665545 . - . ID=gene-LDO09_RS03625;Name=LDO09_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03625;old_locus_tag=TthAA11_07020 NZ_AP024926.1 Protein Homology CDS 664256 665545 . - 0 ID=cds-WP_223968966.1;Parent=gene-LDO09_RS03625;Dbxref=Genbank:WP_223968966.1;Name=WP_223968966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632043.1;locus_tag=LDO09_RS03625;product=flippase;protein_id=WP_223968966.1;transl_table=11 NZ_AP024926.1 RefSeq gene 665551 666924 . - . ID=gene-LDO09_RS03630;Name=LDO09_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03630;old_locus_tag=TthAA11_07030 NZ_AP024926.1 Protein Homology CDS 665551 666924 . - 0 ID=cds-WP_143585024.1;Parent=gene-LDO09_RS03630;Dbxref=Genbank:WP_143585024.1;Name=WP_143585024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172742.1;locus_tag=LDO09_RS03630;product=phosphoglucomutase/phosphomannomutase family protein;protein_id=WP_143585024.1;transl_table=11 NZ_AP024926.1 RefSeq gene 666979 667665 . + . ID=gene-LDO09_RS03635;Name=LDO09_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03635;old_locus_tag=TthAA11_07040 NZ_AP024926.1 Protein Homology CDS 666979 667665 . + 0 ID=cds-WP_143585026.1;Parent=gene-LDO09_RS03635;Dbxref=Genbank:WP_143585026.1;Name=WP_143585026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629912.1;locus_tag=LDO09_RS03635;product=hypothetical protein;protein_id=WP_143585026.1;transl_table=11 NZ_AP024926.1 RefSeq gene 667680 668174 . + . ID=gene-LDO09_RS03640;Name=LDO09_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03640;old_locus_tag=TthAA11_07050 NZ_AP024926.1 Protein Homology CDS 667680 668174 . + 0 ID=cds-WP_143590713.1;Parent=gene-LDO09_RS03640;Dbxref=Genbank:WP_143590713.1;Name=WP_143590713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172744.1;locus_tag=LDO09_RS03640;product=hypothetical protein;protein_id=WP_143590713.1;transl_table=11 NZ_AP024926.1 RefSeq gene 668171 668767 . - . ID=gene-LDO09_RS03645;Name=LDO09_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03645;old_locus_tag=TthAA11_07060 NZ_AP024926.1 Protein Homology CDS 668171 668767 . - 0 ID=cds-WP_165738968.1;Parent=gene-LDO09_RS03645;Dbxref=Genbank:WP_165738968.1;Name=WP_165738968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629910.1;locus_tag=LDO09_RS03645;product=hypothetical protein;protein_id=WP_165738968.1;transl_table=11 NZ_AP024926.1 RefSeq gene 668841 669893 . + . ID=gene-LDO09_RS03650;Name=LDO09_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03650;old_locus_tag=TthAA11_07070 NZ_AP024926.1 Protein Homology CDS 668841 669893 . + 0 ID=cds-WP_223966250.1;Parent=gene-LDO09_RS03650;Dbxref=Genbank:WP_223966250.1;Name=WP_223966250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112443.1;locus_tag=LDO09_RS03650;product=Mrp/NBP35 family ATP-binding protein;protein_id=WP_223966250.1;transl_table=11 NZ_AP024926.1 RefSeq gene 669897 670499 . + . ID=gene-LDO09_RS03655;Name=LDO09_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03655;old_locus_tag=TthAA11_07080 NZ_AP024926.1 Protein Homology CDS 669897 670499 . + 0 ID=cds-WP_011172747.1;Parent=gene-LDO09_RS03655;Dbxref=Genbank:WP_011172747.1;Name=WP_011172747.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510066.1;locus_tag=LDO09_RS03655;product=MarR family transcriptional regulator;protein_id=WP_011172747.1;transl_table=11 NZ_AP024926.1 RefSeq gene 670503 671267 . + . ID=gene-LDO09_RS03660;Name=LDO09_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03660;old_locus_tag=TthAA11_07090 NZ_AP024926.1 Protein Homology CDS 670503 671267 . + 0 ID=cds-WP_014629908.1;Parent=gene-LDO09_RS03660;Dbxref=Genbank:WP_014629908.1;Name=WP_014629908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632050.1;locus_tag=LDO09_RS03660;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_014629908.1;transl_table=11 NZ_AP024926.1 RefSeq gene 671269 671955 . + . ID=gene-LDO09_RS03665;Name=LDO09_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03665;old_locus_tag=TthAA11_07100 NZ_AP024926.1 Protein Homology CDS 671269 671955 . + 0 ID=cds-WP_143590717.1;Parent=gene-LDO09_RS03665;Dbxref=Genbank:WP_143590717.1;Name=WP_143590717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112446.1;locus_tag=LDO09_RS03665;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_143590717.1;transl_table=11 NZ_AP024926.1 RefSeq gene 671952 672383 . + . ID=gene-LDO09_RS03670;Name=LDO09_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03670;old_locus_tag=TthAA11_07110 NZ_AP024926.1 Protein Homology CDS 671952 672383 . + 0 ID=cds-WP_011172750.1;Parent=gene-LDO09_RS03670;Dbxref=Genbank:WP_011172750.1;Name=WP_011172750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510068.1;locus_tag=LDO09_RS03670;product=hypothetical protein;protein_id=WP_011172750.1;transl_table=11 NZ_AP024926.1 RefSeq gene 672297 673199 . - . ID=gene-LDO09_RS03675;Name=LDO09_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03675;old_locus_tag=TthAA11_07120 NZ_AP024926.1 Protein Homology CDS 672297 673199 . - 0 ID=cds-WP_223968969.1;Parent=gene-LDO09_RS03675;Dbxref=Genbank:WP_223968969.1;Name=WP_223968969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172751.1;locus_tag=LDO09_RS03675;product=AEC family transporter;protein_id=WP_223968969.1;transl_table=11 NZ_AP024926.1 RefSeq gene 673209 674054 . + . ID=gene-LDO09_RS03680;Name=LDO09_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03680;old_locus_tag=TthAA11_07130 NZ_AP024926.1 Protein Homology CDS 673209 674054 . + 0 ID=cds-WP_223968971.1;Parent=gene-LDO09_RS03680;Dbxref=Genbank:WP_223968971.1;Name=WP_223968971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629904.1;locus_tag=LDO09_RS03680;product=ornithine cyclodeaminase;protein_id=WP_223968971.1;transl_table=11 NZ_AP024926.1 RefSeq gene 673969 675153 . - . ID=gene-LDO09_RS03685;Name=LDO09_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03685;old_locus_tag=TthAA11_07140 NZ_AP024926.1 Protein Homology CDS 673969 675153 . - 0 ID=cds-WP_223968973.1;Parent=gene-LDO09_RS03685;Dbxref=Genbank:WP_223968973.1;Name=WP_223968973.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228104.1;locus_tag=LDO09_RS03685;product=MFS transporter;protein_id=WP_223968973.1;transl_table=11 NZ_AP024926.1 RefSeq gene 675226 675702 . + . ID=gene-LDO09_RS03690;Name=LDO09_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03690;old_locus_tag=TthAA11_07150 NZ_AP024926.1 Protein Homology CDS 675226 675702 . + 0 ID=cds-WP_143585044.1;Parent=gene-LDO09_RS03690;Dbxref=Genbank:WP_143585044.1;Name=WP_143585044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228105.1;locus_tag=LDO09_RS03690;product=thioredoxin family protein;protein_id=WP_143585044.1;transl_table=11 NZ_AP024926.1 RefSeq gene 675770 678367 . + . ID=gene-LDO09_RS03695;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=LDO09_RS03695;old_locus_tag=TthAA11_07160 NZ_AP024926.1 Protein Homology CDS 675770 678367 . + 0 ID=cds-WP_143585046.1;Parent=gene-LDO09_RS03695;Dbxref=Genbank:WP_143585046.1;Name=WP_143585046.1;Ontology_term=GO:0015976,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228106.1;locus_tag=LDO09_RS03695;product=pyruvate%2C phosphate dikinase;protein_id=WP_143585046.1;transl_table=11 NZ_AP024926.1 RefSeq gene 678364 679272 . - . ID=gene-LDO09_RS03700;Name=LDO09_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03700;old_locus_tag=TthAA11_07170 NZ_AP024926.1 Protein Homology CDS 678364 679272 . - 0 ID=cds-WP_223968975.1;Parent=gene-LDO09_RS03700;Dbxref=Genbank:WP_223968975.1;Name=WP_223968975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629902.1;locus_tag=LDO09_RS03700;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_223968975.1;transl_table=11 NZ_AP024926.1 RefSeq gene 679358 680398 . + . ID=gene-LDO09_RS03705;Name=LDO09_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03705;old_locus_tag=TthAA11_07180 NZ_AP024926.1 Protein Homology CDS 679358 680398 . + 0 ID=cds-WP_223968977.1;Parent=gene-LDO09_RS03705;Dbxref=Genbank:WP_223968977.1;Name=WP_223968977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172757.1;locus_tag=LDO09_RS03705;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_223968977.1;transl_table=11 NZ_AP024926.1 RefSeq gene 680376 681425 . - . ID=gene-LDO09_RS03710;Name=LDO09_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03710;old_locus_tag=TthAA11_07190 NZ_AP024926.1 Protein Homology CDS 680376 681425 . - 0 ID=cds-WP_223968979.1;Parent=gene-LDO09_RS03710;Dbxref=Genbank:WP_223968979.1;Name=WP_223968979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172758.1;locus_tag=LDO09_RS03710;product=sulfate adenylyltransferase;protein_id=WP_223968979.1;transl_table=11 NZ_AP024926.1 RefSeq gene 681428 682150 . - . ID=gene-LDO09_RS03715;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LDO09_RS03715;old_locus_tag=TthAA11_07200 NZ_AP024926.1 Protein Homology CDS 681428 682150 . - 0 ID=cds-WP_223966283.1;Parent=gene-LDO09_RS03715;Dbxref=Genbank:WP_223966283.1;Name=WP_223966283.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228110.1;locus_tag=LDO09_RS03715;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_223966283.1;transl_table=11 NZ_AP024926.1 RefSeq gene 682143 682883 . - . ID=gene-LDO09_RS03720;Name=LDO09_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03720;old_locus_tag=TthAA11_07210 NZ_AP024926.1 Protein Homology CDS 682143 682883 . - 0 ID=cds-WP_060384606.1;Parent=gene-LDO09_RS03720;Dbxref=Genbank:WP_060384606.1;Name=WP_060384606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515751.1;locus_tag=LDO09_RS03720;product=sulfite exporter TauE/SafE family protein;protein_id=WP_060384606.1;transl_table=11 NZ_AP024926.1 RefSeq gene 682885 683553 . - . ID=gene-LDO09_RS03725;Name=LDO09_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03725;old_locus_tag=TthAA11_07220 NZ_AP024926.1 Protein Homology CDS 682885 683553 . - 0 ID=cds-WP_060384605.1;Parent=gene-LDO09_RS03725;Dbxref=Genbank:WP_060384605.1;Name=WP_060384605.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629897.1;locus_tag=LDO09_RS03725;product=phosphoadenylyl-sulfate reductase;protein_id=WP_060384605.1;transl_table=11 NZ_AP024926.1 RefSeq gene 683541 684188 . - . ID=gene-LDO09_RS03730;Name=LDO09_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03730;old_locus_tag=TthAA11_07230 NZ_AP024926.1 Protein Homology CDS 683541 684188 . - 0 ID=cds-WP_008632066.1;Parent=gene-LDO09_RS03730;Dbxref=Genbank:WP_008632066.1;Name=WP_008632066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632066.1;locus_tag=LDO09_RS03730;product=bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase;protein_id=WP_008632066.1;transl_table=11 NZ_AP024926.1 RefSeq gene 684185 684946 . - . ID=gene-LDO09_RS03735;Name=LDO09_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03735;old_locus_tag=TthAA11_07240 NZ_AP024926.1 Protein Homology CDS 684185 684946 . - 0 ID=cds-WP_223966289.1;Parent=gene-LDO09_RS03735;Dbxref=Genbank:WP_223966289.1;Name=WP_223966289.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632067.1;locus_tag=LDO09_RS03735;product=uroporphyrinogen-III synthase;protein_id=WP_223966289.1;transl_table=11 NZ_AP024926.1 RefSeq gene 684957 686699 . - . ID=gene-LDO09_RS03740;Name=LDO09_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03740;old_locus_tag=TthAA11_07250 NZ_AP024926.1 Protein Homology CDS 684957 686699 . - 0 ID=cds-WP_223966291.1;Parent=gene-LDO09_RS03740;Dbxref=Genbank:WP_223966291.1;Name=WP_223966291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510078.1;locus_tag=LDO09_RS03740;product=nitrite/sulfite reductase;protein_id=WP_223966291.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 687108 687790 . + . ID=gene-LDO09_RS03745;Name=LDO09_RS03745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS03745;old_locus_tag=TthAA11_07260;pseudo=true NZ_AP024926.1 Protein Homology CDS 687108 687790 . + 0 ID=cds-LDO09_RS03745;Parent=gene-LDO09_RS03745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS03745;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 687862 688891 . - . ID=gene-LDO09_RS03750;Name=LDO09_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03750 NZ_AP024926.1 Protein Homology CDS 688398 688891 . - 0 ID=cds-WP_223968981.1;Parent=gene-LDO09_RS03750;Dbxref=Genbank:WP_223968981.1;Name=WP_223968981.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611120.1;locus_tag=LDO09_RS03750;product=IS630 family transposase;protein_id=WP_223968981.1;transl_table=11 NZ_AP024926.1 Protein Homology CDS 687862 688399 . - 1 ID=cds-WP_223968981.1;Parent=gene-LDO09_RS03750;Dbxref=Genbank:WP_223968981.1;Name=WP_223968981.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611120.1;locus_tag=LDO09_RS03750;product=IS630 family transposase;protein_id=WP_223968981.1;transl_table=11 NZ_AP024926.1 RefSeq gene 688947 689090 . - . ID=gene-LDO09_RS03755;Name=LDO09_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03755 NZ_AP024926.1 GeneMarkS-2+ CDS 688947 689090 . - 0 ID=cds-WP_223966298.1;Parent=gene-LDO09_RS03755;Dbxref=Genbank:WP_223966298.1;Name=WP_223966298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS03755;product=hypothetical protein;protein_id=WP_223966298.1;transl_table=11 NZ_AP024926.1 cmsearch riboswitch 689364 689473 . + . ID=id-NZ_AP024926.1:689364..689473;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024926.1 RefSeq gene 689544 690164 . + . ID=gene-LDO09_RS03760;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LDO09_RS03760;old_locus_tag=TthAA11_07300 NZ_AP024926.1 Protein Homology CDS 689544 690164 . + 0 ID=cds-WP_223968983.1;Parent=gene-LDO09_RS03760;Dbxref=Genbank:WP_223968983.1;Name=WP_223968983.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172766.1;locus_tag=LDO09_RS03760;product=thiamine phosphate synthase;protein_id=WP_223968983.1;transl_table=11 NZ_AP024926.1 RefSeq gene 690151 690345 . + . ID=gene-LDO09_RS03765;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=LDO09_RS03765;old_locus_tag=TthAA11_07310 NZ_AP024926.1 Protein Homology CDS 690151 690345 . + 0 ID=cds-WP_014510080.1;Parent=gene-LDO09_RS03765;Dbxref=Genbank:WP_014510080.1;Name=WP_014510080.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510080.1;locus_tag=LDO09_RS03765;product=sulfur carrier protein ThiS;protein_id=WP_014510080.1;transl_table=11 NZ_AP024926.1 RefSeq gene 690347 691153 . + . ID=gene-LDO09_RS03770;Name=LDO09_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03770;old_locus_tag=TthAA11_07320 NZ_AP024926.1 Protein Homology CDS 690347 691153 . + 0 ID=cds-WP_223968986.1;Parent=gene-LDO09_RS03770;Dbxref=Genbank:WP_223968986.1;Name=WP_223968986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228115.1;locus_tag=LDO09_RS03770;product=thiazole synthase;protein_id=WP_223968986.1;transl_table=11 NZ_AP024926.1 RefSeq gene 691167 692105 . + . ID=gene-LDO09_RS03775;Name=LDO09_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03775;old_locus_tag=TthAA11_07330 NZ_AP024926.1 Protein Homology CDS 691167 692105 . + 0 ID=cds-WP_223966303.1;Parent=gene-LDO09_RS03775;Dbxref=Genbank:WP_223966303.1;Name=WP_223966303.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172769.1;locus_tag=LDO09_RS03775;product=FAD-dependent oxidoreductase;protein_id=WP_223966303.1;transl_table=11 NZ_AP024926.1 RefSeq gene 692092 693399 . + . ID=gene-LDO09_RS03780;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=LDO09_RS03780;old_locus_tag=TthAA11_07340 NZ_AP024926.1 Protein Homology CDS 692092 693399 . + 0 ID=cds-WP_143585071.1;Parent=gene-LDO09_RS03780;Dbxref=Genbank:WP_143585071.1;Name=WP_143585071.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018467446.1;locus_tag=LDO09_RS03780;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_143585071.1;transl_table=11 NZ_AP024926.1 RefSeq gene 693404 694705 . + . ID=gene-LDO09_RS03785;Name=LDO09_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03785;old_locus_tag=TthAA11_07350 NZ_AP024926.1 Protein Homology CDS 693404 694705 . + 0 ID=cds-WP_223968988.1;Parent=gene-LDO09_RS03785;Dbxref=Genbank:WP_223968988.1;Name=WP_223968988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228118.1;locus_tag=LDO09_RS03785;product=MFS transporter;protein_id=WP_223968988.1;transl_table=11 NZ_AP024926.1 RefSeq gene 694702 695478 . + . ID=gene-LDO09_RS03790;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LDO09_RS03790;old_locus_tag=TthAA11_07360 NZ_AP024926.1 Protein Homology CDS 694702 695478 . + 0 ID=cds-WP_223966307.1;Parent=gene-LDO09_RS03790;Dbxref=Genbank:WP_223966307.1;Name=WP_223966307.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172772.1;locus_tag=LDO09_RS03790;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_223966307.1;transl_table=11 NZ_AP024926.1 RefSeq gene 695531 696157 . - . ID=gene-LDO09_RS03795;Name=LDO09_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03795;old_locus_tag=TthAA11_07370 NZ_AP024926.1 Protein Homology CDS 695531 696157 . - 0 ID=cds-WP_060384598.1;Parent=gene-LDO09_RS03795;Dbxref=Genbank:WP_060384598.1;Name=WP_060384598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632076.1;locus_tag=LDO09_RS03795;product=hypothetical protein;protein_id=WP_060384598.1;transl_table=11 NZ_AP024926.1 RefSeq gene 696154 697398 . - . ID=gene-LDO09_RS03800;Name=LDO09_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03800;old_locus_tag=TthAA11_07380 NZ_AP024926.1 Protein Homology CDS 696154 697398 . - 0 ID=cds-WP_223968990.1;Parent=gene-LDO09_RS03800;Dbxref=Genbank:WP_223968990.1;Name=WP_223968990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629882.1;locus_tag=LDO09_RS03800;product=hypothetical protein;protein_id=WP_223968990.1;transl_table=11 NZ_AP024926.1 RefSeq gene 697376 697753 . - . ID=gene-LDO09_RS03805;Name=LDO09_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03805;old_locus_tag=TthAA11_07390 NZ_AP024926.1 Protein Homology CDS 697376 697753 . - 0 ID=cds-WP_024119918.1;Parent=gene-LDO09_RS03805;Dbxref=Genbank:WP_024119918.1;Name=WP_024119918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510087.1;locus_tag=LDO09_RS03805;product=biopolymer transporter ExbD;protein_id=WP_024119918.1;transl_table=11 NZ_AP024926.1 RefSeq gene 697750 698100 . - . ID=gene-LDO09_RS03810;Name=LDO09_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03810;old_locus_tag=TthAA11_07400 NZ_AP024926.1 Protein Homology CDS 697750 698100 . - 0 ID=cds-WP_011172775.1;Parent=gene-LDO09_RS03810;Dbxref=Genbank:WP_011172775.1;Name=WP_011172775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172775.1;locus_tag=LDO09_RS03810;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_011172775.1;transl_table=11 NZ_AP024926.1 RefSeq gene 698146 698952 . - . ID=gene-LDO09_RS03815;Name=LDO09_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03815;old_locus_tag=TthAA11_07410 NZ_AP024926.1 Protein Homology CDS 698146 698952 . - 0 ID=cds-WP_223968993.1;Parent=gene-LDO09_RS03815;Dbxref=Genbank:WP_223968993.1;Name=WP_223968993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551145.1;locus_tag=LDO09_RS03815;product=carbohydrate ABC transporter permease;protein_id=WP_223968993.1;transl_table=11 NZ_AP024926.1 RefSeq gene 698952 700061 . - . ID=gene-LDO09_RS03820;Name=LDO09_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03820;old_locus_tag=TthAA11_07420 NZ_AP024926.1 Protein Homology CDS 698952 700061 . - 0 ID=cds-WP_024119917.1;Parent=gene-LDO09_RS03820;Dbxref=Genbank:WP_024119917.1;Name=WP_024119917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172777.1;locus_tag=LDO09_RS03820;product=sugar ABC transporter permease;protein_id=WP_024119917.1;transl_table=11 NZ_AP024926.1 RefSeq gene 700105 701349 . - . ID=gene-LDO09_RS03825;Name=LDO09_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03825;old_locus_tag=TthAA11_07430 NZ_AP024926.1 Protein Homology CDS 700105 701349 . - 0 ID=cds-WP_223968995.1;Parent=gene-LDO09_RS03825;Dbxref=Genbank:WP_223968995.1;Name=WP_223968995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510090.1;locus_tag=LDO09_RS03825;product=ABC transporter substrate-binding protein;protein_id=WP_223968995.1;transl_table=11 NZ_AP024926.1 RefSeq gene 701306 702502 . - . ID=gene-LDO09_RS03830;Name=LDO09_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03830;old_locus_tag=TthAA11_07440 NZ_AP024926.1 Protein Homology CDS 701306 702502 . - 0 ID=cds-WP_143585085.1;Parent=gene-LDO09_RS03830;Dbxref=Genbank:WP_143585085.1;Name=WP_143585085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172779.1;locus_tag=LDO09_RS03830;product=ROK family transcriptional regulator;protein_id=WP_143585085.1;transl_table=11 NZ_AP024926.1 RefSeq gene 702602 703756 . + . ID=gene-LDO09_RS03835;Name=LDO09_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03835;old_locus_tag=TthAA11_07450 NZ_AP024926.1 Protein Homology CDS 702602 703756 . + 0 ID=cds-WP_143585087.1;Parent=gene-LDO09_RS03835;Dbxref=Genbank:WP_143585087.1;Name=WP_143585087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629877.1;locus_tag=LDO09_RS03835;product=thiolase family protein;protein_id=WP_143585087.1;transl_table=11 NZ_AP024926.1 RefSeq gene 703767 704495 . + . ID=gene-LDO09_RS03840;Name=LDO09_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03840;old_locus_tag=TthAA11_07460 NZ_AP024926.1 Protein Homology CDS 703767 704495 . + 0 ID=cds-WP_223968998.1;Parent=gene-LDO09_RS03840;Dbxref=Genbank:WP_223968998.1;Name=WP_223968998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228127.1;locus_tag=LDO09_RS03840;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223968998.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 704500 704655 . + . ID=gene-LDO09_RS03845;Name=LDO09_RS03845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS03845;old_locus_tag=TthAA11_07470;partial=true;pseudo=true;start_range=.,704500 NZ_AP024926.1 Protein Homology CDS 704500 704655 . + 0 ID=cds-LDO09_RS03845;Parent=gene-LDO09_RS03845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172782.1;locus_tag=LDO09_RS03845;partial=true;product=CoA transferase;pseudo=true;start_range=.,704500;transl_table=11 NZ_AP024926.1 RefSeq gene 704652 705404 . - . ID=gene-LDO09_RS03850;Name=LDO09_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03850;old_locus_tag=TthAA11_07480 NZ_AP024926.1 Protein Homology CDS 704652 705404 . - 0 ID=cds-WP_223969000.1;Parent=gene-LDO09_RS03850;Dbxref=Genbank:WP_223969000.1;Name=WP_223969000.1;Ontology_term=GO:0003858;gbkey=CDS;go_function=3-hydroxybutyrate dehydrogenase activity|0003858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013013943.1;locus_tag=LDO09_RS03850;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_223969000.1;transl_table=11 NZ_AP024926.1 RefSeq gene 705401 706108 . - . ID=gene-LDO09_RS03855;Name=LDO09_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03855;old_locus_tag=TthAA11_07490 NZ_AP024926.1 Protein Homology CDS 705401 706108 . - 0 ID=cds-WP_223969003.1;Parent=gene-LDO09_RS03855;Dbxref=Genbank:WP_223969003.1;Name=WP_223969003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111468.1;locus_tag=LDO09_RS03855;product=ABC transporter ATP-binding protein;protein_id=WP_223969003.1;transl_table=11 NZ_AP024926.1 RefSeq gene 706095 706865 . - . ID=gene-LDO09_RS03860;Name=LDO09_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03860;old_locus_tag=TthAA11_07500 NZ_AP024926.1 Protein Homology CDS 706095 706865 . - 0 ID=cds-WP_223969006.1;Parent=gene-LDO09_RS03860;Dbxref=Genbank:WP_223969006.1;Name=WP_223969006.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LDO09_RS03860;product=ABC transporter ATP-binding protein;protein_id=WP_223969006.1;transl_table=11 NZ_AP024926.1 RefSeq gene 706850 707788 . - . ID=gene-LDO09_RS03865;Name=LDO09_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03865;old_locus_tag=TthAA11_07510 NZ_AP024926.1 Protein Homology CDS 706850 707788 . - 0 ID=cds-WP_223969008.1;Parent=gene-LDO09_RS03865;Dbxref=Genbank:WP_223969008.1;Name=WP_223969008.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014684.2;locus_tag=LDO09_RS03865;product=branched-chain amino acid ABC transporter permease;protein_id=WP_223969008.1;transl_table=11 NZ_AP024926.1 RefSeq gene 707785 708657 . - . ID=gene-LDO09_RS03870;Name=LDO09_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03870;old_locus_tag=TthAA11_07520 NZ_AP024926.1 Protein Homology CDS 707785 708657 . - 0 ID=cds-WP_223969010.1;Parent=gene-LDO09_RS03870;Dbxref=Genbank:WP_223969010.1;Name=WP_223969010.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014684.2;locus_tag=LDO09_RS03870;product=branched-chain amino acid ABC transporter permease;protein_id=WP_223969010.1;transl_table=11 NZ_AP024926.1 RefSeq gene 708659 709777 . - . ID=gene-LDO09_RS03875;Name=LDO09_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03875;old_locus_tag=TthAA11_07530 NZ_AP024926.1 Protein Homology CDS 708659 709777 . - 0 ID=cds-WP_267461192.1;Parent=gene-LDO09_RS03875;Dbxref=Genbank:WP_267461192.1;Name=WP_267461192.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024850.2;locus_tag=LDO09_RS03875;product=ABC transporter substrate-binding protein;protein_id=WP_267461192.1;transl_table=11 NZ_AP024926.1 RefSeq gene 709878 710849 . - . ID=gene-LDO09_RS03880;Name=LDO09_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03880;old_locus_tag=TthAA11_07540 NZ_AP024926.1 Protein Homology CDS 709878 710849 . - 0 ID=cds-WP_267461196.1;Parent=gene-LDO09_RS03880;Dbxref=Genbank:WP_267461196.1;Name=WP_267461196.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024989.2;locus_tag=LDO09_RS03880;product=zinc-binding dehydrogenase;protein_id=WP_267461196.1;transl_table=11 NZ_AP024926.1 RefSeq gene 710981 712405 . - . ID=gene-LDO09_RS03885;Name=LDO09_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03885;old_locus_tag=TthAA11_07550 NZ_AP024926.1 Protein Homology CDS 710981 712405 . - 0 ID=cds-WP_223969015.1;Parent=gene-LDO09_RS03885;Dbxref=Genbank:WP_223969015.1;Name=WP_223969015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112018.1;locus_tag=LDO09_RS03885;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_223969015.1;transl_table=11 NZ_AP024926.1 RefSeq gene 712559 713590 . + . ID=gene-LDO09_RS03890;Name=LDO09_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03890;old_locus_tag=TthAA11_07560 NZ_AP024926.1 Protein Homology CDS 712559 713590 . + 0 ID=cds-WP_223969017.1;Parent=gene-LDO09_RS03890;Dbxref=Genbank:WP_223969017.1;Name=WP_223969017.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024945.2;locus_tag=LDO09_RS03890;product=helix-turn-helix domain-containing protein;protein_id=WP_223969017.1;transl_table=11 NZ_AP024926.1 RefSeq gene 713587 714291 . - . ID=gene-LDO09_RS03895;Name=LDO09_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03895;old_locus_tag=TthAA11_07570 NZ_AP024926.1 Protein Homology CDS 713587 714291 . - 0 ID=cds-WP_143585095.1;Parent=gene-LDO09_RS03895;Dbxref=Genbank:WP_143585095.1;Name=WP_143585095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172784.1;locus_tag=LDO09_RS03895;product=ABC transporter ATP-binding protein;protein_id=WP_143585095.1;transl_table=11 NZ_AP024926.1 RefSeq gene 714288 715013 . - . ID=gene-LDO09_RS03900;Name=LDO09_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03900;old_locus_tag=TthAA11_07580 NZ_AP024926.1 Protein Homology CDS 714288 715013 . - 0 ID=cds-WP_143585097.1;Parent=gene-LDO09_RS03900;Dbxref=Genbank:WP_143585097.1;Name=WP_143585097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515755.1;locus_tag=LDO09_RS03900;product=ABC transporter ATP-binding protein;protein_id=WP_143585097.1;transl_table=11 NZ_AP024926.1 RefSeq gene 715006 715905 . - . ID=gene-LDO09_RS03905;Name=LDO09_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03905;old_locus_tag=TthAA11_07590 NZ_AP024926.1 Protein Homology CDS 715006 715905 . - 0 ID=cds-WP_011172786.1;Parent=gene-LDO09_RS03905;Dbxref=Genbank:WP_011172786.1;Name=WP_011172786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172786.1;locus_tag=LDO09_RS03905;product=branched-chain amino acid ABC transporter permease;protein_id=WP_011172786.1;transl_table=11 NZ_AP024926.1 RefSeq gene 715902 716759 . - . ID=gene-LDO09_RS03910;Name=LDO09_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03910;old_locus_tag=TthAA11_07600 NZ_AP024926.1 Protein Homology CDS 715902 716759 . - 0 ID=cds-WP_143585098.1;Parent=gene-LDO09_RS03910;Dbxref=Genbank:WP_143585098.1;Name=WP_143585098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629872.1;locus_tag=LDO09_RS03910;product=branched-chain amino acid ABC transporter permease;protein_id=WP_143585098.1;transl_table=11 NZ_AP024926.1 RefSeq gene 716784 717959 . - . ID=gene-LDO09_RS03915;Name=LDO09_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03915;old_locus_tag=TthAA11_07610 NZ_AP024926.1 Protein Homology CDS 716784 717959 . - 0 ID=cds-WP_223969020.1;Parent=gene-LDO09_RS03915;Dbxref=Genbank:WP_223969020.1;Name=WP_223969020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629871.1;locus_tag=LDO09_RS03915;product=ABC transporter substrate-binding protein;protein_id=WP_223969020.1;transl_table=11 NZ_AP024926.1 RefSeq gene 717979 718404 . - . ID=gene-LDO09_RS03920;Name=LDO09_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03920;old_locus_tag=TthAA11_07620 NZ_AP024926.1 Protein Homology CDS 717979 718404 . - 0 ID=cds-WP_011172789.1;Parent=gene-LDO09_RS03920;Dbxref=Genbank:WP_011172789.1;Name=WP_011172789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629870.1;locus_tag=LDO09_RS03920;product=MaoC family dehydratase;protein_id=WP_011172789.1;transl_table=11 NZ_AP024926.1 RefSeq gene 718401 719132 . - . ID=gene-LDO09_RS03925;Name=LDO09_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03925;old_locus_tag=TthAA11_07630 NZ_AP024926.1 Protein Homology CDS 718401 719132 . - 0 ID=cds-WP_223966328.1;Parent=gene-LDO09_RS03925;Dbxref=Genbank:WP_223966328.1;Name=WP_223966328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629869.1;locus_tag=LDO09_RS03925;product=alpha/beta hydrolase;protein_id=WP_223966328.1;transl_table=11 NZ_AP024926.1 RefSeq gene 719125 719898 . - . ID=gene-LDO09_RS03930;Name=LDO09_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03930;old_locus_tag=TthAA11_07640 NZ_AP024926.1 Protein Homology CDS 719125 719898 . - 0 ID=cds-WP_223969022.1;Parent=gene-LDO09_RS03930;Dbxref=Genbank:WP_223969022.1;Name=WP_223969022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510103.1;locus_tag=LDO09_RS03930;product=alpha/beta hydrolase;protein_id=WP_223969022.1;transl_table=11 NZ_AP024926.1 RefSeq gene 719885 721363 . - . ID=gene-LDO09_RS03935;Name=LDO09_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03935;old_locus_tag=TthAA11_07650 NZ_AP024926.1 Protein Homology CDS 719885 721363 . - 0 ID=cds-WP_223966331.1;Parent=gene-LDO09_RS03935;Dbxref=Genbank:WP_223966331.1;Name=WP_223966331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510104.1;locus_tag=LDO09_RS03935;product=AMP-binding protein;protein_id=WP_223966331.1;transl_table=11 NZ_AP024926.1 RefSeq gene 721356 722363 . - . ID=gene-LDO09_RS03940;Name=LDO09_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03940;old_locus_tag=TthAA11_07660 NZ_AP024926.1 Protein Homology CDS 721356 722363 . - 0 ID=cds-WP_223969024.1;Parent=gene-LDO09_RS03940;Dbxref=Genbank:WP_223969024.1;Name=WP_223969024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172793.1;locus_tag=LDO09_RS03940;product=3-oxoacyl-ACP synthase;protein_id=WP_223969024.1;transl_table=11 NZ_AP024926.1 RefSeq gene 722433 725021 . + . ID=gene-LDO09_RS03945;Name=LDO09_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03945;old_locus_tag=TthAA11_07670 NZ_AP024926.1 Protein Homology CDS 722433 725021 . + 0 ID=cds-WP_223969027.1;Parent=gene-LDO09_RS03945;Dbxref=Genbank:WP_223969027.1;Name=WP_223969027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629865.1;locus_tag=LDO09_RS03945;product=hypothetical protein;protein_id=WP_223969027.1;transl_table=11 NZ_AP024926.1 RefSeq gene 725018 727225 . - . ID=gene-LDO09_RS03950;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LDO09_RS03950;old_locus_tag=TthAA11_07680 NZ_AP024926.1 Protein Homology CDS 725018 727225 . - 0 ID=cds-WP_143585114.1;Parent=gene-LDO09_RS03950;Dbxref=Genbank:WP_143585114.1;Name=WP_143585114.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172795.1;locus_tag=LDO09_RS03950;product=protein translocase subunit SecD;protein_id=WP_143585114.1;transl_table=11 NZ_AP024926.1 RefSeq gene 727313 727591 . - . ID=gene-LDO09_RS03955;Name=LDO09_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03955;old_locus_tag=TthAA11_07690 NZ_AP024926.1 Protein Homology CDS 727313 727591 . - 0 ID=cds-WP_143585116.1;Parent=gene-LDO09_RS03955;Dbxref=Genbank:WP_143585116.1;Name=WP_143585116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172796.1;locus_tag=LDO09_RS03955;product=hypothetical protein;protein_id=WP_143585116.1;transl_table=11 NZ_AP024926.1 RefSeq gene 727596 729311 . - . ID=gene-LDO09_RS03960;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LDO09_RS03960;old_locus_tag=TthAA11_07700 NZ_AP024926.1 Protein Homology CDS 727596 729311 . - 0 ID=cds-WP_143585118.1;Parent=gene-LDO09_RS03960;Dbxref=Genbank:WP_143585118.1;Name=WP_143585118.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048160.1;locus_tag=LDO09_RS03960;product=translation initiation factor IF-2;protein_id=WP_143585118.1;transl_table=11 NZ_AP024926.1 RefSeq gene 729280 729555 . - . ID=gene-LDO09_RS03965;Name=LDO09_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03965;old_locus_tag=TthAA11_07710 NZ_AP024926.1 Protein Homology CDS 729280 729555 . - 0 ID=cds-WP_143585120.1;Parent=gene-LDO09_RS03965;Dbxref=Genbank:WP_143585120.1;Name=WP_143585120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172798.1;locus_tag=LDO09_RS03965;product=YlxR family protein;protein_id=WP_143585120.1;transl_table=11 NZ_AP024926.1 RefSeq gene 729552 730715 . - . ID=gene-LDO09_RS03970;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LDO09_RS03970;old_locus_tag=TthAA11_07720 NZ_AP024926.1 Protein Homology CDS 729552 730715 . - 0 ID=cds-WP_143585122.1;Parent=gene-LDO09_RS03970;Dbxref=Genbank:WP_143585122.1;Name=WP_143585122.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172799.1;locus_tag=LDO09_RS03970;product=transcription termination factor NusA;protein_id=WP_143585122.1;transl_table=11 NZ_AP024926.1 RefSeq gene 730731 731204 . - . ID=gene-LDO09_RS03975;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LDO09_RS03975;old_locus_tag=TthAA11_07730 NZ_AP024926.1 Protein Homology CDS 730731 731204 . - 0 ID=cds-WP_081466127.1;Parent=gene-LDO09_RS03975;Dbxref=Genbank:WP_081466127.1;Name=WP_081466127.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172800.1;locus_tag=LDO09_RS03975;product=ribosome maturation factor RimP;protein_id=WP_081466127.1;transl_table=11 NZ_AP024926.1 RefSeq gene 731319 731667 . + . ID=gene-LDO09_RS03980;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LDO09_RS03980;old_locus_tag=TthAA11_tm00010 NZ_AP024926.1 cmsearch tmRNA 731319 731667 . + . ID=rna-LDO09_RS03980;Parent=gene-LDO09_RS03980;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS03980;product=transfer-messenger RNA NZ_AP024926.1 cmsearch exon 731319 731667 . + . ID=exon-LDO09_RS03980-1;Parent=rna-LDO09_RS03980;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS03980;product=transfer-messenger RNA NZ_AP024926.1 RefSeq gene 731814 732929 . + . ID=gene-LDO09_RS03985;Name=LDO09_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03985;old_locus_tag=TthAA11_07740 NZ_AP024926.1 Protein Homology CDS 731814 732929 . + 0 ID=cds-WP_143585124.1;Parent=gene-LDO09_RS03985;Dbxref=Genbank:WP_143585124.1;Name=WP_143585124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228133.1;locus_tag=LDO09_RS03985;product=M23 family metallopeptidase;protein_id=WP_143585124.1;transl_table=11 NZ_AP024926.1 RefSeq gene 733064 733945 . + . ID=gene-LDO09_RS03990;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=LDO09_RS03990;old_locus_tag=TthAA11_07750 NZ_AP024926.1 Protein Homology CDS 733064 733945 . + 0 ID=cds-WP_024119184.1;Parent=gene-LDO09_RS03990;Dbxref=Genbank:WP_024119184.1;Name=WP_024119184.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=LDO09_RS03990;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_024119184.1;transl_table=11 NZ_AP024926.1 RefSeq gene 733989 734297 . + . ID=gene-LDO09_RS03995;Name=LDO09_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS03995;old_locus_tag=TthAA11_07760 NZ_AP024926.1 Protein Homology CDS 733989 734297 . + 0 ID=cds-WP_223966732.1;Parent=gene-LDO09_RS03995;Dbxref=Genbank:WP_223966732.1;Name=WP_223966732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003044680.1;locus_tag=LDO09_RS03995;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_223966732.1;transl_table=11 NZ_AP024926.1 RefSeq gene 734329 736383 . + . ID=gene-LDO09_RS04000;Name=LDO09_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04000;old_locus_tag=TthAA11_07770 NZ_AP024926.1 Protein Homology CDS 734329 736383 . + 0 ID=cds-WP_143585128.1;Parent=gene-LDO09_RS04000;Dbxref=Genbank:WP_143585128.1;Name=WP_143585128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629857.1;locus_tag=LDO09_RS04000;product=cation-translocating P-type ATPase;protein_id=WP_143585128.1;transl_table=11 NZ_AP024926.1 RefSeq gene 736398 737087 . - . ID=gene-LDO09_RS04005;Name=LDO09_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04005;old_locus_tag=TthAA11_07780 NZ_AP024926.1 Protein Homology CDS 736398 737087 . - 0 ID=cds-WP_143584079.1-4;Parent=gene-LDO09_RS04005;Dbxref=Genbank:WP_143584079.1;Name=WP_143584079.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS04005;product=IS5-like element ISTth7 family transposase;protein_id=WP_143584079.1;transl_table=11 NZ_AP024926.1 RefSeq gene 737554 738129 . + . ID=gene-LDO09_RS04010;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=LDO09_RS04010;old_locus_tag=TthAA11_07800 NZ_AP024926.1 Protein Homology CDS 737554 738129 . + 0 ID=cds-WP_223969029.1;Parent=gene-LDO09_RS04010;Dbxref=Genbank:WP_223969029.1;Name=WP_223969029.1;Ontology_term=GO:0042823,GO:0016884;gbkey=CDS;gene=pdxT;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003044649.1;locus_tag=LDO09_RS04010;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_223969029.1;transl_table=11 NZ_AP024926.1 RefSeq gene 738201 739517 . - . ID=gene-LDO09_RS04015;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=LDO09_RS04015;old_locus_tag=TthAA11_07810 NZ_AP024926.1 Protein Homology CDS 738201 739517 . - 0 ID=cds-WP_143585132.1;Parent=gene-LDO09_RS04015;Dbxref=Genbank:WP_143585132.1;Name=WP_143585132.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510115.1;locus_tag=LDO09_RS04015;product=asparagine--tRNA ligase;protein_id=WP_143585132.1;transl_table=11 NZ_AP024926.1 RefSeq gene 739581 740396 . - . ID=gene-LDO09_RS04020;Name=LDO09_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04020;old_locus_tag=TthAA11_07820 NZ_AP024926.1 Protein Homology CDS 739581 740396 . - 0 ID=cds-WP_143586934.1;Parent=gene-LDO09_RS04020;Dbxref=Genbank:WP_143586934.1;Name=WP_143586934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632098.1;locus_tag=LDO09_RS04020;product=HAD family hydrolase;protein_id=WP_143586934.1;transl_table=11 NZ_AP024926.1 RefSeq gene 740411 741304 . - . ID=gene-LDO09_RS04025;Name=LDO09_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04025;old_locus_tag=TthAA11_07830 NZ_AP024926.1 Protein Homology CDS 740411 741304 . - 0 ID=cds-WP_014629843.1;Parent=gene-LDO09_RS04025;Dbxref=Genbank:WP_014629843.1;Name=WP_014629843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172808.1;locus_tag=LDO09_RS04025;product=PhzF family phenazine biosynthesis protein;protein_id=WP_014629843.1;transl_table=11 NZ_AP024926.1 RefSeq gene 741301 743043 . - . ID=gene-LDO09_RS04030;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LDO09_RS04030;old_locus_tag=TthAA11_07840 NZ_AP024926.1 Protein Homology CDS 741301 743043 . - 0 ID=cds-WP_223969031.1;Parent=gene-LDO09_RS04030;Dbxref=Genbank:WP_223969031.1;Name=WP_223969031.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629842.1;locus_tag=LDO09_RS04030;product=aspartate--tRNA ligase;protein_id=WP_223969031.1;transl_table=11 NZ_AP024926.1 RefSeq gene 743068 744333 . - . ID=gene-LDO09_RS04035;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LDO09_RS04035;old_locus_tag=TthAA11_07850 NZ_AP024926.1 Protein Homology CDS 743068 744333 . - 0 ID=cds-WP_223969034.1;Parent=gene-LDO09_RS04035;Dbxref=Genbank:WP_223969034.1;Name=WP_223969034.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172810.1;locus_tag=LDO09_RS04035;product=histidine--tRNA ligase;protein_id=WP_223969034.1;transl_table=11 NZ_AP024926.1 RefSeq gene 744378 744695 . + . ID=gene-LDO09_RS04040;Name=LDO09_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04040;old_locus_tag=TthAA11_07860 NZ_AP024926.1 Protein Homology CDS 744378 744695 . + 0 ID=cds-WP_143585138.1;Parent=gene-LDO09_RS04040;Dbxref=Genbank:WP_143585138.1;Name=WP_143585138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172811.1;locus_tag=LDO09_RS04040;product=hypothetical protein;protein_id=WP_143585138.1;transl_table=11 NZ_AP024926.1 RefSeq gene 745150 746169 . - . ID=gene-LDO09_RS04045;Name=LDO09_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04045;old_locus_tag=TthAA11_07870 NZ_AP024926.1 Protein Homology CDS 745150 746169 . - 0 ID=cds-WP_143585140.1;Parent=gene-LDO09_RS04045;Dbxref=Genbank:WP_143585140.1;Name=WP_143585140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172813.1;locus_tag=LDO09_RS04045;product=ABC transporter ATP-binding protein;protein_id=WP_143585140.1;transl_table=11 NZ_AP024926.1 RefSeq gene 746139 746813 . - . ID=gene-LDO09_RS04050;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=LDO09_RS04050;old_locus_tag=TthAA11_07880 NZ_AP024926.1 Protein Homology CDS 746139 746813 . - 0 ID=cds-WP_143585142.1;Parent=gene-LDO09_RS04050;Dbxref=Genbank:WP_143585142.1;Name=WP_143585142.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510119.1;locus_tag=LDO09_RS04050;product=molybdate ABC transporter permease subunit;protein_id=WP_143585142.1;transl_table=11 NZ_AP024926.1 RefSeq gene 746813 747685 . - . ID=gene-LDO09_RS04055;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=LDO09_RS04055;old_locus_tag=TthAA11_07890 NZ_AP024926.1 Protein Homology CDS 746813 747685 . - 0 ID=cds-WP_143585144.1;Parent=gene-LDO09_RS04055;Dbxref=Genbank:WP_143585144.1;Name=WP_143585144.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632110.1;locus_tag=LDO09_RS04055;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_143585144.1;transl_table=11 NZ_AP024926.1 cmsearch riboswitch 747676 747800 . - . ID=id-NZ_AP024926.1:747676..747800;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024926.1 RefSeq gene 747816 749399 . - . ID=gene-LDO09_RS04060;Name=LDO09_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04060;old_locus_tag=TthAA11_07900 NZ_AP024926.1 Protein Homology CDS 747816 749399 . - 0 ID=cds-WP_223969036.1;Parent=gene-LDO09_RS04060;Dbxref=Genbank:WP_223969036.1;Name=WP_223969036.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630183.1;locus_tag=LDO09_RS04060;product=IS200/IS605 family accessory protein TnpB-related protein;protein_id=WP_223969036.1;transl_table=11 NZ_AP024926.1 RefSeq gene 749567 750184 . - . ID=gene-LDO09_RS04065;Name=LDO09_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04065;old_locus_tag=TthAA11_07910 NZ_AP024926.1 Protein Homology CDS 749567 750184 . - 0 ID=cds-WP_060384584.1;Parent=gene-LDO09_RS04065;Dbxref=Genbank:WP_060384584.1;Name=WP_060384584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550063.1;locus_tag=LDO09_RS04065;product=uracil-DNA glycosylase;protein_id=WP_060384584.1;transl_table=11 NZ_AP024926.1 RefSeq gene 750181 750549 . - . ID=gene-LDO09_RS04070;Name=LDO09_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04070;old_locus_tag=TthAA11_07920 NZ_AP024926.1 Protein Homology CDS 750181 750549 . - 0 ID=cds-WP_008632112.1;Parent=gene-LDO09_RS04070;Dbxref=Genbank:WP_008632112.1;Name=WP_008632112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550064.1;locus_tag=LDO09_RS04070;product=hypothetical protein;protein_id=WP_008632112.1;transl_table=11 NZ_AP024926.1 RefSeq gene 750629 751693 . + . ID=gene-LDO09_RS04075;Name=LDO09_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04075;old_locus_tag=TthAA11_07930 NZ_AP024926.1 Protein Homology CDS 750629 751693 . + 0 ID=cds-WP_143585147.1;Parent=gene-LDO09_RS04075;Dbxref=Genbank:WP_143585147.1;Name=WP_143585147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172817.1;locus_tag=LDO09_RS04075;product=hypothetical protein;protein_id=WP_143585147.1;transl_table=11 NZ_AP024926.1 RefSeq gene 751694 752260 . + . ID=gene-LDO09_RS04080;Name=LDO09_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04080;old_locus_tag=TthAA11_07940 NZ_AP024926.1 Protein Homology CDS 751694 752260 . + 0 ID=cds-WP_014629834.1;Parent=gene-LDO09_RS04080;Dbxref=Genbank:WP_014629834.1;Name=WP_014629834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228144.1;locus_tag=LDO09_RS04080;product=DUF3108 domain-containing protein;protein_id=WP_014629834.1;transl_table=11 NZ_AP024926.1 RefSeq gene 752291 753529 . + . ID=gene-LDO09_RS04085;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=LDO09_RS04085;old_locus_tag=TthAA11_07950 NZ_AP024926.1 Protein Homology CDS 752291 753529 . + 0 ID=cds-WP_143585149.1;Parent=gene-LDO09_RS04085;Dbxref=Genbank:WP_143585149.1;Name=WP_143585149.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629833.1;locus_tag=LDO09_RS04085;product=histidinol dehydrogenase;protein_id=WP_143585149.1;transl_table=11 NZ_AP024926.1 RefSeq gene 753526 754323 . + . ID=gene-LDO09_RS04090;Name=LDO09_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04090;old_locus_tag=TthAA11_07960 NZ_AP024926.1 Protein Homology CDS 753526 754323 . + 0 ID=cds-WP_143585151.1;Parent=gene-LDO09_RS04090;Dbxref=Genbank:WP_143585151.1;Name=WP_143585151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510122.1;locus_tag=LDO09_RS04090;product=helical backbone metal receptor;protein_id=WP_143585151.1;transl_table=11 NZ_AP024926.1 RefSeq gene 754359 755660 . + . ID=gene-LDO09_RS04095;Name=LDO09_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04095;old_locus_tag=TthAA11_07970 NZ_AP024926.1 Protein Homology CDS 754359 755660 . + 0 ID=cds-WP_014510123.1;Parent=gene-LDO09_RS04095;Dbxref=Genbank:WP_014510123.1;Name=WP_014510123.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629831.1;locus_tag=LDO09_RS04095;product=S8 family serine peptidase;protein_id=WP_014510123.1;transl_table=11 NZ_AP024926.1 RefSeq gene 755696 756841 . + . ID=gene-LDO09_RS04100;Name=LDO09_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04100;old_locus_tag=TthAA11_07980 NZ_AP024926.1 Protein Homology CDS 755696 756841 . + 0 ID=cds-WP_143585153.1;Parent=gene-LDO09_RS04100;Dbxref=Genbank:WP_143585153.1;Name=WP_143585153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629830.1;locus_tag=LDO09_RS04100;product=LCP family protein;protein_id=WP_143585153.1;transl_table=11 NZ_AP024926.1 RefSeq gene 757032 757119 . + . ID=gene-LDO09_RS04105;Name=LDO09_RS04105;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS04105;old_locus_tag=TthAA11_t00270 NZ_AP024926.1 tRNAscan-SE tRNA 757032 757119 . + . ID=rna-LDO09_RS04105;Parent=gene-LDO09_RS04105;anticodon=(pos:757065..757067);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS04105;product=tRNA-Leu NZ_AP024926.1 tRNAscan-SE exon 757032 757119 . + . ID=exon-LDO09_RS04105-1;Parent=rna-LDO09_RS04105;anticodon=(pos:757065..757067);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS04105;product=tRNA-Leu NZ_AP024926.1 RefSeq gene 757165 759873 . - . ID=gene-LDO09_RS04110;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=LDO09_RS04110;old_locus_tag=TthAA11_07990 NZ_AP024926.1 Protein Homology CDS 757165 759873 . - 0 ID=cds-WP_143585155.1;Parent=gene-LDO09_RS04110;Dbxref=Genbank:WP_143585155.1;Name=WP_143585155.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172823.1;locus_tag=LDO09_RS04110;product=aconitate hydratase AcnA;protein_id=WP_143585155.1;transl_table=11 NZ_AP024926.1 RefSeq gene 759979 760332 . - . ID=gene-LDO09_RS04115;Name=LDO09_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04115;old_locus_tag=TthAA11_08000 NZ_AP024926.1 Protein Homology CDS 759979 760332 . - 0 ID=cds-WP_014629828.1;Parent=gene-LDO09_RS04115;Dbxref=Genbank:WP_014629828.1;Name=WP_014629828.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632121.1;locus_tag=LDO09_RS04115;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_014629828.1;transl_table=11 NZ_AP024926.1 RefSeq gene 760337 761083 . - . ID=gene-LDO09_RS04120;Name=LDO09_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04120;old_locus_tag=TthAA11_08010 NZ_AP024926.1 Protein Homology CDS 760337 761083 . - 0 ID=cds-WP_143585157.1;Parent=gene-LDO09_RS04120;Dbxref=Genbank:WP_143585157.1;Name=WP_143585157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172824.1;locus_tag=LDO09_RS04120;product=alpha/beta hydrolase;protein_id=WP_143585157.1;transl_table=11 NZ_AP024926.1 RefSeq gene 761080 764379 . - . ID=gene-LDO09_RS04125;Name=LDO09_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04125;old_locus_tag=TthAA11_08020 NZ_AP024926.1 Protein Homology CDS 761080 764379 . - 0 ID=cds-WP_143585159.1;Parent=gene-LDO09_RS04125;Dbxref=Genbank:WP_143585159.1;Name=WP_143585159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228151.1;locus_tag=LDO09_RS04125;product=efflux RND transporter permease subunit;protein_id=WP_143585159.1;transl_table=11 NZ_AP024926.1 RefSeq gene 764376 765554 . - . ID=gene-LDO09_RS04130;Name=LDO09_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04130;old_locus_tag=TthAA11_08030 NZ_AP024926.1 Protein Homology CDS 764376 765554 . - 0 ID=cds-WP_143585161.1;Parent=gene-LDO09_RS04130;Dbxref=Genbank:WP_143585161.1;Name=WP_143585161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172826.1;locus_tag=LDO09_RS04130;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_143585161.1;transl_table=11 NZ_AP024926.1 RefSeq gene 765558 766529 . - . ID=gene-LDO09_RS04135;Name=LDO09_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04135;old_locus_tag=TthAA11_08040 NZ_AP024926.1 Protein Homology CDS 765558 766529 . - 0 ID=cds-WP_011172827.1;Parent=gene-LDO09_RS04135;Dbxref=Genbank:WP_011172827.1;Name=WP_011172827.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632131.1;locus_tag=LDO09_RS04135;product=TolC family protein;protein_id=WP_011172827.1;transl_table=11 NZ_AP024926.1 RefSeq gene 766526 767791 . - . ID=gene-LDO09_RS04140;Name=LDO09_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04140;old_locus_tag=TthAA11_08050 NZ_AP024926.1 Protein Homology CDS 766526 767791 . - 0 ID=cds-WP_143585163.1;Parent=gene-LDO09_RS04140;Dbxref=Genbank:WP_143585163.1;Name=WP_143585163.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228153.1;locus_tag=LDO09_RS04140;product=TolC family protein;protein_id=WP_143585163.1;transl_table=11 NZ_AP024926.1 RefSeq gene 767784 768218 . - . ID=gene-LDO09_RS04145;Name=LDO09_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04145;old_locus_tag=TthAA11_08060 NZ_AP024926.1 Protein Homology CDS 767784 768218 . - 0 ID=cds-WP_011172829.1;Parent=gene-LDO09_RS04145;Dbxref=Genbank:WP_011172829.1;Name=WP_011172829.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228154.1;locus_tag=LDO09_RS04145;product=MarR family transcriptional regulator;protein_id=WP_011172829.1;transl_table=11 NZ_AP024926.1 RefSeq gene 768377 769717 . + . ID=gene-LDO09_RS04150;Name=LDO09_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04150;old_locus_tag=TthAA11_08070 NZ_AP024926.1 Protein Homology CDS 768377 769717 . + 0 ID=cds-WP_143585165.1;Parent=gene-LDO09_RS04150;Dbxref=Genbank:WP_143585165.1;Name=WP_143585165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172830.1;locus_tag=LDO09_RS04150;product=hemolysin family protein;protein_id=WP_143585165.1;transl_table=11 NZ_AP024926.1 RefSeq gene 769698 770072 . + . ID=gene-LDO09_RS04155;Name=LDO09_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04155;old_locus_tag=TthAA11_08080 NZ_AP024926.1 Protein Homology CDS 769698 770072 . + 0 ID=cds-WP_014629822.1;Parent=gene-LDO09_RS04155;Dbxref=Genbank:WP_014629822.1;Name=WP_014629822.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172831.1;locus_tag=LDO09_RS04155;product=cytidine deaminase;protein_id=WP_014629822.1;transl_table=11 NZ_AP024926.1 RefSeq gene 770069 770746 . - . ID=gene-LDO09_RS04160;Name=LDO09_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04160;old_locus_tag=TthAA11_08090 NZ_AP024926.1 Protein Homology CDS 770069 770746 . - 0 ID=cds-WP_014629821.1;Parent=gene-LDO09_RS04160;Dbxref=Genbank:WP_014629821.1;Name=WP_014629821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228156.1;locus_tag=LDO09_RS04160;product=hypothetical protein;protein_id=WP_014629821.1;transl_table=11 NZ_AP024926.1 RefSeq gene 770734 771585 . - . ID=gene-LDO09_RS04165;Name=LDO09_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04165;old_locus_tag=TthAA11_08100 NZ_AP024926.1 Protein Homology CDS 770734 771585 . - 0 ID=cds-WP_143585167.1;Parent=gene-LDO09_RS04165;Dbxref=Genbank:WP_143585167.1;Name=WP_143585167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228157.1;locus_tag=LDO09_RS04165;product=dihydrodipicolinate synthase family protein;protein_id=WP_143585167.1;transl_table=11 NZ_AP024926.1 RefSeq gene 771582 773507 . - . ID=gene-LDO09_RS04170;Name=LDO09_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04170;old_locus_tag=TthAA11_08110 NZ_AP024926.1 Protein Homology CDS 771582 773507 . - 0 ID=cds-WP_143585169.1;Parent=gene-LDO09_RS04170;Dbxref=Genbank:WP_143585169.1;Name=WP_143585169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629819.1;locus_tag=LDO09_RS04170;product=hypothetical protein;protein_id=WP_143585169.1;transl_table=11 NZ_AP024926.1 RefSeq gene 773525 774187 . + . ID=gene-LDO09_RS04175;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=LDO09_RS04175;old_locus_tag=TthAA11_08120 NZ_AP024926.1 Protein Homology CDS 773525 774187 . + 0 ID=cds-WP_143585171.1;Parent=gene-LDO09_RS04175;Dbxref=Genbank:WP_143585171.1;Name=WP_143585171.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228158.1;locus_tag=LDO09_RS04175;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_143585171.1;transl_table=11 NZ_AP024926.1 RefSeq gene 774226 775200 . - . ID=gene-LDO09_RS04180;Name=LDO09_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04180;old_locus_tag=TthAA11_08130 NZ_AP024926.1 Protein Homology CDS 774226 775200 . - 0 ID=cds-WP_223969038.1;Parent=gene-LDO09_RS04180;Dbxref=Genbank:WP_223969038.1;Name=WP_223969038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172836.1;locus_tag=LDO09_RS04180;product=ATP-binding protein;protein_id=WP_223969038.1;transl_table=11 NZ_AP024926.1 RefSeq gene 775184 777016 . - . ID=gene-LDO09_RS04185;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LDO09_RS04185;old_locus_tag=TthAA11_08140 NZ_AP024926.1 Protein Homology CDS 775184 777016 . - 0 ID=cds-WP_143585175.1;Parent=gene-LDO09_RS04185;Dbxref=Genbank:WP_143585175.1;Name=WP_143585175.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172837.1;locus_tag=LDO09_RS04185;product=translation elongation factor 4;protein_id=WP_143585175.1;transl_table=11 NZ_AP024926.1 cmsearch riboswitch 777114 777273 . + . ID=id-NZ_AP024926.1:777114..777273;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024926.1 RefSeq gene 777406 778260 . + . ID=gene-LDO09_RS04190;Name=LDO09_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04190;old_locus_tag=TthAA11_08150 NZ_AP024926.1 Protein Homology CDS 777406 778260 . + 0 ID=cds-WP_143585177.1;Parent=gene-LDO09_RS04190;Dbxref=Genbank:WP_143585177.1;Name=WP_143585177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515401.1;locus_tag=LDO09_RS04190;product=ABC transporter substrate-binding protein;protein_id=WP_143585177.1;transl_table=11 NZ_AP024926.1 RefSeq gene 778257 779285 . + . ID=gene-LDO09_RS04195;Name=LDO09_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04195;old_locus_tag=TthAA11_08160 NZ_AP024926.1 Protein Homology CDS 778257 779285 . + 0 ID=cds-WP_143585179.1;Parent=gene-LDO09_RS04195;Dbxref=Genbank:WP_143585179.1;Name=WP_143585179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112457.1;locus_tag=LDO09_RS04195;product=iron ABC transporter permease;protein_id=WP_143585179.1;transl_table=11 NZ_AP024926.1 RefSeq gene 779272 780024 . + . ID=gene-LDO09_RS04200;Name=LDO09_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04200;old_locus_tag=TthAA11_08170 NZ_AP024926.1 Protein Homology CDS 779272 780024 . + 0 ID=cds-WP_143585181.1;Parent=gene-LDO09_RS04200;Dbxref=Genbank:WP_143585181.1;Name=WP_143585181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228167.1;locus_tag=LDO09_RS04200;product=ABC transporter ATP-binding protein;protein_id=WP_143585181.1;transl_table=11 NZ_AP024926.1 RefSeq gene 780005 780337 . + . ID=gene-LDO09_RS04205;Name=LDO09_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04205;old_locus_tag=TthAA11_08180 NZ_AP024926.1 Protein Homology CDS 780005 780337 . + 0 ID=cds-WP_143585183.1;Parent=gene-LDO09_RS04205;Dbxref=Genbank:WP_143585183.1;Name=WP_143585183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632155.1;locus_tag=LDO09_RS04205;product=hypothetical protein;protein_id=WP_143585183.1;transl_table=11 NZ_AP024926.1 RefSeq gene 780377 781114 . + . ID=gene-LDO09_RS04210;Name=LDO09_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04210;old_locus_tag=TthAA11_08190 NZ_AP024926.1 Protein Homology CDS 780377 781114 . + 0 ID=cds-WP_008632156.1;Parent=gene-LDO09_RS04210;Dbxref=Genbank:WP_008632156.1;Name=WP_008632156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112460.1;locus_tag=LDO09_RS04210;product=SDR family oxidoreductase;protein_id=WP_008632156.1;transl_table=11 NZ_AP024926.1 RefSeq gene 781210 781485 . + . ID=gene-LDO09_RS04215;Name=LDO09_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04215;old_locus_tag=TthAA11_08200 NZ_AP024926.1 Protein Homology CDS 781210 781485 . + 0 ID=cds-WP_143585185.1;Parent=gene-LDO09_RS04215;Dbxref=Genbank:WP_143585185.1;Name=WP_143585185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629812.1;locus_tag=LDO09_RS04215;product=hypothetical protein;protein_id=WP_143585185.1;transl_table=11 NZ_AP024926.1 RefSeq gene 781485 782651 . + . ID=gene-LDO09_RS04220;Name=LDO09_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04220;old_locus_tag=TthAA11_08210 NZ_AP024926.1 Protein Homology CDS 781485 782651 . + 0 ID=cds-WP_143585187.1;Parent=gene-LDO09_RS04220;Dbxref=Genbank:WP_143585187.1;Name=WP_143585187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632158.1;locus_tag=LDO09_RS04220;product=serine hydrolase domain-containing protein;protein_id=WP_143585187.1;transl_table=11 NZ_AP024926.1 RefSeq gene 782633 783655 . - . ID=gene-LDO09_RS04225;Name=LDO09_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04225;old_locus_tag=TthAA11_08220 NZ_AP024926.1 Protein Homology CDS 782633 783655 . - 0 ID=cds-WP_143585189.1;Parent=gene-LDO09_RS04225;Dbxref=Genbank:WP_143585189.1;Name=WP_143585189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629810.1;locus_tag=LDO09_RS04225;product=threonine aldolase family protein;protein_id=WP_143585189.1;transl_table=11 NZ_AP024926.1 RefSeq gene 783660 784319 . - . ID=gene-LDO09_RS04230;Name=LDO09_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04230;old_locus_tag=TthAA11_08230 NZ_AP024926.1 Protein Homology CDS 783660 784319 . - 0 ID=cds-WP_093007522.1;Parent=gene-LDO09_RS04230;Dbxref=Genbank:WP_093007522.1;Name=WP_093007522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510137.1;locus_tag=LDO09_RS04230;product=metal-dependent transcriptional regulator;protein_id=WP_093007522.1;transl_table=11 NZ_AP024926.1 RefSeq gene 784343 785917 . + . ID=gene-LDO09_RS04235;Name=LDO09_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04235;old_locus_tag=TthAA11_08240 NZ_AP024926.1 Protein Homology CDS 784343 785917 . + 0 ID=cds-WP_223969040.1;Parent=gene-LDO09_RS04235;Dbxref=Genbank:WP_223969040.1;Name=WP_223969040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228174.1;locus_tag=LDO09_RS04235;product=gamma-glutamyltransferase family protein;protein_id=WP_223969040.1;transl_table=11 NZ_AP024926.1 RefSeq gene 785955 786845 . - . ID=gene-LDO09_RS04240;Name=LDO09_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04240;old_locus_tag=TthAA11_08250 NZ_AP024926.1 Protein Homology CDS 785955 786845 . - 0 ID=cds-WP_143585193.1;Parent=gene-LDO09_RS04240;Dbxref=Genbank:WP_143585193.1;Name=WP_143585193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629805.1;locus_tag=LDO09_RS04240;product=DUF72 domain-containing protein;protein_id=WP_143585193.1;transl_table=11 NZ_AP024926.1 RefSeq gene 786855 787997 . - . ID=gene-LDO09_RS04245;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=LDO09_RS04245;old_locus_tag=TthAA11_08260 NZ_AP024926.1 Protein Homology CDS 786855 787997 . - 0 ID=cds-WP_011228177.1;Parent=gene-LDO09_RS04245;Dbxref=Genbank:WP_011228177.1;Name=WP_011228177.1;Ontology_term=GO:0009086,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629804.1;locus_tag=LDO09_RS04245;product=homoserine O-acetyltransferase;protein_id=WP_011228177.1;transl_table=11 NZ_AP024926.1 RefSeq gene 787994 789259 . - . ID=gene-LDO09_RS04250;Name=LDO09_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04250;old_locus_tag=TthAA11_08270 NZ_AP024926.1 Protein Homology CDS 787994 789259 . - 0 ID=cds-WP_223966434.1;Parent=gene-LDO09_RS04250;Dbxref=Genbank:WP_223966434.1;Name=WP_223966434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632163.1;locus_tag=LDO09_RS04250;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=WP_223966434.1;transl_table=11 NZ_AP024926.1 cmsearch riboswitch 789374 789510 . - . ID=id-NZ_AP024926.1:789374..789510;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024926.1 RefSeq gene 789569 789979 . - . ID=gene-LDO09_RS04255;Name=LDO09_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04255;old_locus_tag=TthAA11_08280 NZ_AP024926.1 Protein Homology CDS 789569 789979 . - 0 ID=cds-WP_008632164.1;Parent=gene-LDO09_RS04255;Dbxref=Genbank:WP_008632164.1;Name=WP_008632164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632164.1;locus_tag=LDO09_RS04255;product=SufE family protein;protein_id=WP_008632164.1;transl_table=11 NZ_AP024926.1 RefSeq gene 789989 790693 . - . ID=gene-LDO09_RS04260;Name=LDO09_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04260;old_locus_tag=TthAA11_08290 NZ_AP024926.1 Protein Homology CDS 789989 790693 . - 0 ID=cds-WP_014629802.1;Parent=gene-LDO09_RS04260;Dbxref=Genbank:WP_014629802.1;Name=WP_014629802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172857.1;locus_tag=LDO09_RS04260;product=SDR family oxidoreductase;protein_id=WP_014629802.1;transl_table=11 NZ_AP024926.1 RefSeq gene 790695 791786 . - . ID=gene-LDO09_RS04265;Name=LDO09_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04265;old_locus_tag=TthAA11_08300 NZ_AP024926.1 Protein Homology CDS 790695 791786 . - 0 ID=cds-WP_223969042.1;Parent=gene-LDO09_RS04265;Dbxref=Genbank:WP_223969042.1;Name=WP_223969042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632166.1;locus_tag=LDO09_RS04265;product=zinc-binding dehydrogenase;protein_id=WP_223969042.1;transl_table=11 NZ_AP024926.1 RefSeq gene 791783 792844 . - . ID=gene-LDO09_RS04270;Name=LDO09_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04270;old_locus_tag=TthAA11_08310 NZ_AP024926.1 Protein Homology CDS 791783 792844 . - 0 ID=cds-WP_143585199.1;Parent=gene-LDO09_RS04270;Dbxref=Genbank:WP_143585199.1;Name=WP_143585199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172859.1;locus_tag=LDO09_RS04270;product=class II aldolase/adducin family protein;protein_id=WP_143585199.1;transl_table=11 NZ_AP024926.1 RefSeq gene 792890 793882 . + . ID=gene-LDO09_RS04275;Name=LDO09_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04275;old_locus_tag=TthAA11_08320 NZ_AP024926.1 Protein Homology CDS 792890 793882 . + 0 ID=cds-WP_143585201.1;Parent=gene-LDO09_RS04275;Dbxref=Genbank:WP_143585201.1;Name=WP_143585201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172860.1;locus_tag=LDO09_RS04275;product=P1 family peptidase;protein_id=WP_143585201.1;transl_table=11 NZ_AP024926.1 RefSeq gene 794046 795050 . + . ID=gene-LDO09_RS04280;Name=dctP;gbkey=Gene;gene=dctP;gene_biotype=protein_coding;locus_tag=LDO09_RS04280;old_locus_tag=TthAA11_08330 NZ_AP024926.1 Protein Homology CDS 794046 795050 . + 0 ID=cds-WP_223966439.1;Parent=gene-LDO09_RS04280;Dbxref=Genbank:WP_223966439.1;Name=WP_223966439.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dctP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461657.1;locus_tag=LDO09_RS04280;product=TRAP transporter substrate-binding protein DctP;protein_id=WP_223966439.1;transl_table=11 NZ_AP024926.1 RefSeq gene 795055 795567 . + . ID=gene-LDO09_RS04285;Name=LDO09_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04285;old_locus_tag=TthAA11_08340 NZ_AP024926.1 Protein Homology CDS 795055 795567 . + 0 ID=cds-WP_011172862.1;Parent=gene-LDO09_RS04285;Dbxref=Genbank:WP_011172862.1;Name=WP_011172862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172862.1;locus_tag=LDO09_RS04285;product=TRAP transporter small permease subunit;protein_id=WP_011172862.1;transl_table=11 NZ_AP024926.1 RefSeq gene 795557 796870 . + . ID=gene-LDO09_RS04290;Name=LDO09_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04290;old_locus_tag=TthAA11_08350 NZ_AP024926.1 Protein Homology CDS 795557 796870 . + 0 ID=cds-WP_014629797.1;Parent=gene-LDO09_RS04290;Dbxref=Genbank:WP_014629797.1;Name=WP_014629797.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172863.1;locus_tag=LDO09_RS04290;product=TRAP transporter large permease subunit;protein_id=WP_014629797.1;transl_table=11 NZ_AP024926.1 RefSeq gene 796867 797868 . - . ID=gene-LDO09_RS04295;Name=LDO09_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04295;old_locus_tag=TthAA11_08360 NZ_AP024926.1 Protein Homology CDS 796867 797868 . - 0 ID=cds-WP_223969043.1;Parent=gene-LDO09_RS04295;Dbxref=Genbank:WP_223969043.1;Name=WP_223969043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172864.1;locus_tag=LDO09_RS04295;product=S1C family serine protease;protein_id=WP_223969043.1;transl_table=11 NZ_AP024926.1 RefSeq gene 797873 800260 . - . ID=gene-LDO09_RS04300;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LDO09_RS04300;old_locus_tag=TthAA11_08370 NZ_AP024926.1 Protein Homology CDS 797873 800260 . - 0 ID=cds-WP_143585207.1;Parent=gene-LDO09_RS04300;Dbxref=Genbank:WP_143585207.1;Name=WP_143585207.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172865.1;locus_tag=LDO09_RS04300;product=endopeptidase La;protein_id=WP_143585207.1;transl_table=11 NZ_AP024926.1 RefSeq gene 800319 801068 . - . ID=gene-LDO09_RS04305;Name=LDO09_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04305;old_locus_tag=TthAA11_08380 NZ_AP024926.1 Protein Homology CDS 800319 801068 . - 0 ID=cds-WP_011172866.1;Parent=gene-LDO09_RS04305;Dbxref=Genbank:WP_011172866.1;Name=WP_011172866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629794.1;locus_tag=LDO09_RS04305;product=ABC transporter permease;protein_id=WP_011172866.1;transl_table=11 NZ_AP024926.1 RefSeq gene 801053 801799 . - . ID=gene-LDO09_RS04310;Name=LDO09_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04310;old_locus_tag=TthAA11_08390 NZ_AP024926.1 Protein Homology CDS 801053 801799 . - 0 ID=cds-WP_143585209.1;Parent=gene-LDO09_RS04310;Dbxref=Genbank:WP_143585209.1;Name=WP_143585209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510147.1;locus_tag=LDO09_RS04310;product=ABC transporter ATP-binding protein;protein_id=WP_143585209.1;transl_table=11 NZ_AP024926.1 RefSeq gene 801792 802781 . - . ID=gene-LDO09_RS04320;Name=LDO09_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04320;old_locus_tag=TthAA11_08400 NZ_AP024926.1 Protein Homology CDS 801792 802781 . - 0 ID=cds-WP_267461193.1;Parent=gene-LDO09_RS04320;Dbxref=Genbank:WP_267461193.1;Name=WP_267461193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510148.1;locus_tag=LDO09_RS04320;product=ABC transporter substrate-binding protein;protein_id=WP_267461193.1;transl_table=11 NZ_AP024926.1 RefSeq gene 802989 803510 . - . ID=gene-LDO09_RS04330;Name=LDO09_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04330;old_locus_tag=TthAA11_08410 NZ_AP024926.1 Protein Homology CDS 802989 803510 . - 0 ID=cds-WP_143585211.1;Parent=gene-LDO09_RS04330;Dbxref=Genbank:WP_143585211.1;Name=WP_143585211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629791.1;locus_tag=LDO09_RS04330;product=hypothetical protein;protein_id=WP_143585211.1;transl_table=11 NZ_AP024926.1 RefSeq gene 803536 804573 . + . ID=gene-LDO09_RS04335;Name=LDO09_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04335;old_locus_tag=TthAA11_08420 NZ_AP024926.1 Protein Homology CDS 803536 804573 . + 0 ID=cds-WP_143585213.1;Parent=gene-LDO09_RS04335;Dbxref=Genbank:WP_143585213.1;Name=WP_143585213.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632178.1;locus_tag=LDO09_RS04335;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_143585213.1;transl_table=11 NZ_AP024926.1 RefSeq gene 804563 805039 . - . ID=gene-LDO09_RS04340;Name=LDO09_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04340;old_locus_tag=TthAA11_08430 NZ_AP024926.1 Protein Homology CDS 804563 805039 . - 0 ID=cds-WP_143585215.1;Parent=gene-LDO09_RS04340;Dbxref=Genbank:WP_143585215.1;Name=WP_143585215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550939.1;locus_tag=LDO09_RS04340;product=Uma2 family endonuclease;protein_id=WP_143585215.1;transl_table=11 NZ_AP024926.1 RefSeq gene 805044 806324 . - . ID=gene-LDO09_RS04345;Name=LDO09_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04345;old_locus_tag=TthAA11_08440 NZ_AP024926.1 Protein Homology CDS 805044 806324 . - 0 ID=cds-WP_223969046.1;Parent=gene-LDO09_RS04345;Dbxref=Genbank:WP_223969046.1;Name=WP_223969046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629788.1;locus_tag=LDO09_RS04345;product=dihydroorotase;protein_id=WP_223969046.1;transl_table=11 NZ_AP024926.1 RefSeq gene 806321 806788 . - . ID=gene-LDO09_RS04350;Name=LDO09_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04350;old_locus_tag=TthAA11_08450 NZ_AP024926.1 Protein Homology CDS 806321 806788 . - 0 ID=cds-WP_143585220.1;Parent=gene-LDO09_RS04350;Dbxref=Genbank:WP_143585220.1;Name=WP_143585220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629787.1;locus_tag=LDO09_RS04350;product=PIN domain-containing protein;protein_id=WP_143585220.1;transl_table=11 NZ_AP024926.1 RefSeq gene 806760 806909 . - . ID=gene-LDO09_RS04355;Name=LDO09_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04355;old_locus_tag=TthAA11_08460 NZ_AP024926.1 Protein Homology CDS 806760 806909 . - 0 ID=cds-WP_167345968.1;Parent=gene-LDO09_RS04355;Dbxref=Genbank:WP_167345968.1;Name=WP_167345968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328812.1;locus_tag=LDO09_RS04355;product=hypothetical protein;protein_id=WP_167345968.1;transl_table=11 NZ_AP024926.1 RefSeq gene 806929 807834 . - . ID=gene-LDO09_RS04360;Name=LDO09_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04360;old_locus_tag=TthAA11_08470 NZ_AP024926.1 Protein Homology CDS 806929 807834 . - 0 ID=cds-WP_143585222.1;Parent=gene-LDO09_RS04360;Dbxref=Genbank:WP_143585222.1;Name=WP_143585222.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632182.1;locus_tag=LDO09_RS04360;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_143585222.1;transl_table=11 NZ_AP024926.1 RefSeq gene 807831 808376 . - . ID=gene-LDO09_RS04365;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=LDO09_RS04365;old_locus_tag=TthAA11_08480 NZ_AP024926.1 Protein Homology CDS 807831 808376 . - 0 ID=cds-WP_124104672.1;Parent=gene-LDO09_RS04365;Dbxref=Genbank:WP_124104672.1;Name=WP_124104672.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172875.1;locus_tag=LDO09_RS04365;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_124104672.1;transl_table=11 NZ_AP024926.1 RefSeq gene 808577 808906 . - . ID=gene-LDO09_RS04370;Name=LDO09_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04370;old_locus_tag=TthAA11_08490 NZ_AP024926.1 Protein Homology CDS 808577 808906 . - 0 ID=cds-WP_165738754.1;Parent=gene-LDO09_RS04370;Dbxref=Genbank:WP_165738754.1;Name=WP_165738754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629784.1;locus_tag=LDO09_RS04370;product=SPW repeat protein;protein_id=WP_165738754.1;transl_table=11 NZ_AP024926.1 RefSeq gene 808971 809717 . - . ID=gene-LDO09_RS04375;Name=LDO09_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04375;old_locus_tag=TthAA11_08500 NZ_AP024926.1 Protein Homology CDS 808971 809717 . - 0 ID=cds-WP_143585226.1;Parent=gene-LDO09_RS04375;Dbxref=Genbank:WP_143585226.1;Name=WP_143585226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510156.1;locus_tag=LDO09_RS04375;product=sulfite exporter TauE/SafE family protein;protein_id=WP_143585226.1;transl_table=11 NZ_AP024926.1 RefSeq gene 809723 810658 . - . ID=gene-LDO09_RS04380;Name=LDO09_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04380;old_locus_tag=TthAA11_08510 NZ_AP024926.1 Protein Homology CDS 809723 810658 . - 0 ID=cds-WP_143585228.1;Parent=gene-LDO09_RS04380;Dbxref=Genbank:WP_143585228.1;Name=WP_143585228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629782.1;locus_tag=LDO09_RS04380;product=D-glycerate dehydrogenase;protein_id=WP_143585228.1;transl_table=11 NZ_AP024926.1 RefSeq gene 810682 811992 . - . ID=gene-LDO09_RS04385;Name=LDO09_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04385;old_locus_tag=TthAA11_08520 NZ_AP024926.1 Protein Homology CDS 810682 811992 . - 0 ID=cds-WP_223969048.1;Parent=gene-LDO09_RS04385;Dbxref=Genbank:WP_223969048.1;Name=WP_223969048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550946.1;locus_tag=LDO09_RS04385;product=metallopeptidase TldD-related protein;protein_id=WP_223969048.1;transl_table=11 NZ_AP024926.1 RefSeq gene 811989 813383 . - . ID=gene-LDO09_RS04390;Name=LDO09_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04390;old_locus_tag=TthAA11_08530 NZ_AP024926.1 Protein Homology CDS 811989 813383 . - 0 ID=cds-WP_143585232.1;Parent=gene-LDO09_RS04390;Dbxref=Genbank:WP_143585232.1;Name=WP_143585232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510159.1;locus_tag=LDO09_RS04390;product=TldD/PmbA family protein;protein_id=WP_143585232.1;transl_table=11 NZ_AP024926.1 RefSeq gene 813415 814293 . - . ID=gene-LDO09_RS04395;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LDO09_RS04395;old_locus_tag=TthAA11_08540 NZ_AP024926.1 Protein Homology CDS 813415 814293 . - 0 ID=cds-WP_143585234.1;Parent=gene-LDO09_RS04395;Dbxref=Genbank:WP_143585234.1;Name=WP_143585234.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172881.1;locus_tag=LDO09_RS04395;product=DNA polymerase III subunit delta;protein_id=WP_143585234.1;transl_table=11 NZ_AP024926.1 RefSeq gene 814328 815485 . - . ID=gene-LDO09_RS04400;Name=LDO09_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04400;old_locus_tag=TthAA11_08550 NZ_AP024926.1 Protein Homology CDS 814328 815485 . - 0 ID=cds-WP_223966491.1;Parent=gene-LDO09_RS04400;Dbxref=Genbank:WP_223966491.1;Name=WP_223966491.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172882.1;locus_tag=LDO09_RS04400;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223966491.1;transl_table=11 NZ_AP024926.1 RefSeq gene 815495 816121 . - . ID=gene-LDO09_RS04405;Name=LDO09_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04405;old_locus_tag=TthAA11_08560 NZ_AP024926.1 Protein Homology CDS 815495 816121 . - 0 ID=cds-WP_223966493.1;Parent=gene-LDO09_RS04405;Dbxref=Genbank:WP_223966493.1;Name=WP_223966493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019549968.1;locus_tag=LDO09_RS04405;product=GNAT family N-acetyltransferase;protein_id=WP_223966493.1;transl_table=11 NZ_AP024926.1 RefSeq gene 816155 817237 . + . ID=gene-LDO09_RS04410;Name=LDO09_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04410;old_locus_tag=TthAA11_08570 NZ_AP024926.1 Protein Homology CDS 816155 817237 . + 0 ID=cds-WP_143585240.1;Parent=gene-LDO09_RS04410;Dbxref=Genbank:WP_143585240.1;Name=WP_143585240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172884.1;locus_tag=LDO09_RS04410;product=PIG-L family deacetylase;protein_id=WP_143585240.1;transl_table=11 NZ_AP024926.1 RefSeq gene 817181 817714 . - . ID=gene-LDO09_RS04415;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=LDO09_RS04415;old_locus_tag=TthAA11_08580 NZ_AP024926.1 Protein Homology CDS 817181 817714 . - 0 ID=cds-WP_143585242.1;Parent=gene-LDO09_RS04415;Dbxref=Genbank:WP_143585242.1;Name=WP_143585242.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632201.1;locus_tag=LDO09_RS04415;product=SMC-Scp complex subunit ScpB;protein_id=WP_143585242.1;transl_table=11 NZ_AP024926.1 RefSeq gene 817718 818305 . - . ID=gene-LDO09_RS04420;Name=LDO09_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04420;old_locus_tag=TthAA11_08590 NZ_AP024926.1 Protein Homology CDS 817718 818305 . - 0 ID=cds-WP_143585244.1;Parent=gene-LDO09_RS04420;Dbxref=Genbank:WP_143585244.1;Name=WP_143585244.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629775.1;locus_tag=LDO09_RS04420;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_143585244.1;transl_table=11 NZ_AP024926.1 RefSeq gene 818304 819524 . + . ID=gene-LDO09_RS04425;Name=LDO09_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04425;old_locus_tag=TthAA11_08600 NZ_AP024926.1 Protein Homology CDS 818304 819524 . + 0 ID=cds-WP_143585246.1;Parent=gene-LDO09_RS04425;Dbxref=Genbank:WP_143585246.1;Name=WP_143585246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328828.1;locus_tag=LDO09_RS04425;product=type II secretion system F family protein;protein_id=WP_143585246.1;transl_table=11 NZ_AP024926.1 RefSeq gene 819499 819951 . - . ID=gene-LDO09_RS04430;Name=LDO09_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04430;old_locus_tag=TthAA11_08610 NZ_AP024926.1 Protein Homology CDS 819499 819951 . - 0 ID=cds-WP_223966496.1;Parent=gene-LDO09_RS04430;Dbxref=Genbank:WP_223966496.1;Name=WP_223966496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328829.1;locus_tag=LDO09_RS04430;product=EVE domain-containing protein;protein_id=WP_223966496.1;transl_table=11 NZ_AP024926.1 RefSeq gene 820020 820487 . + . ID=gene-LDO09_RS04435;Name=LDO09_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04435;old_locus_tag=TthAA11_08620 NZ_AP024926.1 Protein Homology CDS 820020 820487 . + 0 ID=cds-WP_223966498.1;Parent=gene-LDO09_RS04435;Dbxref=Genbank:WP_223966498.1;Name=WP_223966498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172888.1;locus_tag=LDO09_RS04435;product=hypothetical protein;protein_id=WP_223966498.1;transl_table=11 NZ_AP024926.1 RefSeq gene 820502 821857 . + . ID=gene-LDO09_RS04440;Name=LDO09_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04440;old_locus_tag=TthAA11_08630 NZ_AP024926.1 Protein Homology CDS 820502 821857 . + 0 ID=cds-WP_223969050.1;Parent=gene-LDO09_RS04440;Dbxref=Genbank:WP_223969050.1;Name=WP_223969050.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228206.1;locus_tag=LDO09_RS04440;product=FAD-binding protein;protein_id=WP_223969050.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 821910 822859 . + . ID=gene-LDO09_RS04445;Name=LDO09_RS04445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS04445;old_locus_tag=TthAA11_08640;pseudo=true NZ_AP024926.1 Protein Homology CDS 821910 822859 . + 0 ID=cds-LDO09_RS04445;Parent=gene-LDO09_RS04445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632207.1;locus_tag=LDO09_RS04445;product=GGDEF domain-containing protein;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 822844 823923 . - . ID=gene-LDO09_RS04450;Name=LDO09_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04450;old_locus_tag=TthAA11_08650 NZ_AP024926.1 Protein Homology CDS 822844 823923 . - 0 ID=cds-WP_223969052.1;Parent=gene-LDO09_RS04450;Dbxref=Genbank:WP_223969052.1;Name=WP_223969052.1;Ontology_term=GO:0006571,GO:0004665,GO:0008977;gbkey=CDS;go_function=prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228208.1;locus_tag=LDO09_RS04450;product=prephenate dehydrogenase/arogenate dehydrogenase family protein;protein_id=WP_223969052.1;transl_table=11 NZ_AP024926.1 RefSeq gene 823920 824954 . - . ID=gene-LDO09_RS04455;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=LDO09_RS04455;old_locus_tag=TthAA11_08660 NZ_AP024926.1 Protein Homology CDS 823920 824954 . - 0 ID=cds-WP_014629769.1;Parent=gene-LDO09_RS04455;Dbxref=Genbank:WP_014629769.1;Name=WP_014629769.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;gene=aroF;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515223.1;locus_tag=LDO09_RS04455;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_014629769.1;transl_table=11 NZ_AP024926.1 RefSeq gene 825095 825868 . - . ID=gene-LDO09_RS04460;Name=LDO09_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04460;old_locus_tag=TthAA11_08670 NZ_AP024926.1 Protein Homology CDS 825095 825868 . - 0 ID=cds-WP_223966501.1;Parent=gene-LDO09_RS04460;Dbxref=Genbank:WP_223966501.1;Name=WP_223966501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632212.1;locus_tag=LDO09_RS04460;product=VOC family protein;protein_id=WP_223966501.1;transl_table=11 NZ_AP024926.1 RefSeq gene 825868 826404 . - . ID=gene-LDO09_RS04465;Name=LDO09_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04465;old_locus_tag=TthAA11_08680 NZ_AP024926.1 Protein Homology CDS 825868 826404 . - 0 ID=cds-WP_143585258.1;Parent=gene-LDO09_RS04465;Dbxref=Genbank:WP_143585258.1;Name=WP_143585258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228210.1;locus_tag=LDO09_RS04465;product=YceI family protein;protein_id=WP_143585258.1;transl_table=11 NZ_AP024926.1 RefSeq gene 826470 827285 . - . ID=gene-LDO09_RS04470;Name=LDO09_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04470;old_locus_tag=TthAA11_08690 NZ_AP024926.1 Protein Homology CDS 826470 827285 . - 0 ID=cds-WP_143585260.1;Parent=gene-LDO09_RS04470;Dbxref=Genbank:WP_143585260.1;Name=WP_143585260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228211.1;locus_tag=LDO09_RS04470;product=menaquinone biosynthesis protein;protein_id=WP_143585260.1;transl_table=11 NZ_AP024926.1 RefSeq gene 827282 828400 . - . ID=gene-LDO09_RS04475;Name=mqnE;gbkey=Gene;gene=mqnE;gene_biotype=protein_coding;locus_tag=LDO09_RS04475;old_locus_tag=TthAA11_08700 NZ_AP024926.1 Protein Homology CDS 827282 828400 . - 0 ID=cds-WP_143585261.1;Parent=gene-LDO09_RS04475;Dbxref=Genbank:WP_143585261.1;Name=WP_143585261.1;Ontology_term=GO:0009234;gbkey=CDS;gene=mqnE;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510170.1;locus_tag=LDO09_RS04475;product=aminofutalosine synthase MqnE;protein_id=WP_143585261.1;transl_table=11 NZ_AP024926.1 RefSeq gene 828411 829076 . - . ID=gene-LDO09_RS04480;Name=LDO09_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04480;old_locus_tag=TthAA11_08710 NZ_AP024926.1 Protein Homology CDS 828411 829076 . - 0 ID=cds-WP_143585262.1;Parent=gene-LDO09_RS04480;Dbxref=Genbank:WP_143585262.1;Name=WP_143585262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629765.1;locus_tag=LDO09_RS04480;product=hypothetical protein;protein_id=WP_143585262.1;transl_table=11 NZ_AP024926.1 RefSeq gene 829076 829516 . - . ID=gene-LDO09_RS04485;Name=LDO09_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04485;old_locus_tag=TthAA11_08720 NZ_AP024926.1 Protein Homology CDS 829076 829516 . - 0 ID=cds-WP_143585263.1;Parent=gene-LDO09_RS04485;Dbxref=Genbank:WP_143585263.1;Name=WP_143585263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172900.1;locus_tag=LDO09_RS04485;product=YqhA family protein;protein_id=WP_143585263.1;transl_table=11 NZ_AP024926.1 RefSeq gene 829526 830560 . - . ID=gene-LDO09_RS04490;Name=LDO09_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04490;old_locus_tag=TthAA11_08730 NZ_AP024926.1 Protein Homology CDS 829526 830560 . - 0 ID=cds-WP_124104651.1;Parent=gene-LDO09_RS04490;Dbxref=Genbank:WP_124104651.1;Name=WP_124104651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228214.1;locus_tag=LDO09_RS04490;product=substrate-binding domain-containing protein;protein_id=WP_124104651.1;transl_table=11 NZ_AP024926.1 RefSeq gene 830653 831186 . + . ID=gene-LDO09_RS04495;Name=LDO09_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04495;old_locus_tag=TthAA11_08740 NZ_AP024926.1 Protein Homology CDS 830653 831186 . + 0 ID=cds-WP_143585265.1;Parent=gene-LDO09_RS04495;Dbxref=Genbank:WP_143585265.1;Name=WP_143585265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632225.1;locus_tag=LDO09_RS04495;product=glycerol-3-phosphate acyltransferase;protein_id=WP_143585265.1;transl_table=11 NZ_AP024926.1 RefSeq gene 831196 831990 . + . ID=gene-LDO09_RS04500;Name=LDO09_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04500;old_locus_tag=TthAA11_08750 NZ_AP024926.1 Protein Homology CDS 831196 831990 . + 0 ID=cds-WP_143585267.1;Parent=gene-LDO09_RS04500;Dbxref=Genbank:WP_143585267.1;Name=WP_143585267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019549983.1;locus_tag=LDO09_RS04500;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_143585267.1;transl_table=11 NZ_AP024926.1 RefSeq gene 831984 832883 . + . ID=gene-LDO09_RS04505;Name=LDO09_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04505;old_locus_tag=TthAA11_08760 NZ_AP024926.1 Protein Homology CDS 831984 832883 . + 0 ID=cds-WP_143585268.1;Parent=gene-LDO09_RS04505;Dbxref=Genbank:WP_143585268.1;Name=WP_143585268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228215.1;locus_tag=LDO09_RS04505;product=MBL fold metallo-hydrolase;protein_id=WP_143585268.1;transl_table=11 NZ_AP024926.1 RefSeq gene 832884 833771 . + . ID=gene-LDO09_RS04510;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LDO09_RS04510;old_locus_tag=TthAA11_08770 NZ_AP024926.1 Protein Homology CDS 832884 833771 . + 0 ID=cds-WP_172619176.1;Parent=gene-LDO09_RS04510;Dbxref=Genbank:WP_172619176.1;Name=WP_172619176.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629758.1;locus_tag=LDO09_RS04510;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_172619176.1;transl_table=11 NZ_AP024926.1 RefSeq gene 833768 835021 . + . ID=gene-LDO09_RS04515;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LDO09_RS04515;old_locus_tag=TthAA11_08780 NZ_AP024926.1 Protein Homology CDS 833768 835021 . + 0 ID=cds-WP_143585270.1;Parent=gene-LDO09_RS04515;Dbxref=Genbank:WP_143585270.1;Name=WP_143585270.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228217.1;locus_tag=LDO09_RS04515;product=phosphoribosylamine--glycine ligase;protein_id=WP_143585270.1;transl_table=11 NZ_AP024926.1 RefSeq gene 835011 836885 . - . ID=gene-LDO09_RS04520;Name=LDO09_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04520;old_locus_tag=TthAA11_08790 NZ_AP024926.1 Protein Homology CDS 835011 836885 . - 0 ID=cds-WP_223969054.1;Parent=gene-LDO09_RS04520;Dbxref=Genbank:WP_223969054.1;Name=WP_223969054.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172907.1;locus_tag=LDO09_RS04520;product=3'-5' exonuclease;protein_id=WP_223969054.1;transl_table=11 NZ_AP024926.1 RefSeq gene 836882 837244 . - . ID=gene-LDO09_RS04525;Name=LDO09_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04525;old_locus_tag=TthAA11_08800 NZ_AP024926.1 Protein Homology CDS 836882 837244 . - 0 ID=cds-WP_124104647.1;Parent=gene-LDO09_RS04525;Dbxref=Genbank:WP_124104647.1;Name=WP_124104647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510174.1;locus_tag=LDO09_RS04525;product=response regulator;protein_id=WP_124104647.1;transl_table=11 NZ_AP024926.1 RefSeq gene 837216 839717 . - . ID=gene-LDO09_RS04530;Name=LDO09_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04530;old_locus_tag=TthAA11_08810 NZ_AP024926.1 Protein Homology CDS 837216 839717 . - 0 ID=cds-WP_143585274.1;Parent=gene-LDO09_RS04530;Dbxref=Genbank:WP_143585274.1;Name=WP_143585274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629754.1;locus_tag=LDO09_RS04530;product=ATP-binding protein;protein_id=WP_143585274.1;transl_table=11 NZ_AP024926.1 RefSeq gene 839714 839890 . - . ID=gene-LDO09_RS04535;Name=LDO09_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04535;old_locus_tag=TthAA11_08820 NZ_AP024926.1 Protein Homology CDS 839714 839890 . - 0 ID=cds-WP_011172910.1;Parent=gene-LDO09_RS04535;Dbxref=Genbank:WP_011172910.1;Name=WP_011172910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632250.1;locus_tag=LDO09_RS04535;product=hypothetical protein;protein_id=WP_011172910.1;transl_table=11 NZ_AP024926.1 RefSeq gene 839887 841644 . - . ID=gene-LDO09_RS04540;Name=LDO09_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04540;old_locus_tag=TthAA11_08830 NZ_AP024926.1 Protein Homology CDS 839887 841644 . - 0 ID=cds-WP_143585276.1;Parent=gene-LDO09_RS04540;Dbxref=Genbank:WP_143585276.1;Name=WP_143585276.1;Ontology_term=GO:0008773;gbkey=CDS;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228219.1;locus_tag=LDO09_RS04540;product=DUF294 nucleotidyltransferase-like domain-containing protein;protein_id=WP_143585276.1;transl_table=11 NZ_AP024926.1 RefSeq gene 841616 841969 . - . ID=gene-LDO09_RS04545;Name=LDO09_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04545;old_locus_tag=TthAA11_08840 NZ_AP024926.1 Protein Homology CDS 841616 841969 . - 0 ID=cds-WP_143585278.1;Parent=gene-LDO09_RS04545;Dbxref=Genbank:WP_143585278.1;Name=WP_143585278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172912.1;locus_tag=LDO09_RS04545;product=hypothetical protein;protein_id=WP_143585278.1;transl_table=11 NZ_AP024926.1 RefSeq gene 842024 843697 . - . ID=gene-LDO09_RS04550;Name=LDO09_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04550;old_locus_tag=TthAA11_08850 NZ_AP024926.1 Protein Homology CDS 842024 843697 . - 0 ID=cds-WP_143585280.1;Parent=gene-LDO09_RS04550;Dbxref=Genbank:WP_143585280.1;Name=WP_143585280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510177.1;locus_tag=LDO09_RS04550;product=cation acetate symporter;protein_id=WP_143585280.1;transl_table=11 NZ_AP024926.1 RefSeq gene 843707 843964 . - . ID=gene-LDO09_RS04555;Name=LDO09_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04555;old_locus_tag=TthAA11_08860 NZ_AP024926.1 Protein Homology CDS 843707 843964 . - 0 ID=cds-WP_143585283.1;Parent=gene-LDO09_RS04555;Dbxref=Genbank:WP_143585283.1;Name=WP_143585283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629751.1;locus_tag=LDO09_RS04555;product=DUF4212 domain-containing protein;protein_id=WP_143585283.1;transl_table=11 NZ_AP024926.1 RefSeq gene 844200 844934 . - . ID=gene-LDO09_RS04560;Name=LDO09_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04560;old_locus_tag=TthAA11_08870 NZ_AP024926.1 Protein Homology CDS 844200 844934 . - 0 ID=cds-WP_143585285.1;Parent=gene-LDO09_RS04560;Dbxref=Genbank:WP_143585285.1;Name=WP_143585285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632256.1;locus_tag=LDO09_RS04560;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_143585285.1;transl_table=11 NZ_AP024926.1 RefSeq gene 844903 846450 . - . ID=gene-LDO09_RS04565;Name=LDO09_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04565;old_locus_tag=TthAA11_08880 NZ_AP024926.1 Protein Homology CDS 844903 846450 . - 0 ID=cds-WP_143585287.1;Parent=gene-LDO09_RS04565;Dbxref=Genbank:WP_143585287.1;Name=WP_143585287.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510180.1;locus_tag=LDO09_RS04565;product=cation:proton antiporter;protein_id=WP_143585287.1;transl_table=11 NZ_AP024926.1 RefSeq gene 846493 847128 . - . ID=gene-LDO09_RS04570;Name=LDO09_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04570;old_locus_tag=TthAA11_08890 NZ_AP024926.1 Protein Homology CDS 846493 847128 . - 0 ID=cds-WP_011228223.1;Parent=gene-LDO09_RS04570;Dbxref=Genbank:WP_011228223.1;Name=WP_011228223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629748.1;locus_tag=LDO09_RS04570;product=DsbA family protein;protein_id=WP_011228223.1;transl_table=11 NZ_AP024926.1 RefSeq gene 847259 848203 . - . ID=gene-LDO09_RS04575;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=LDO09_RS04575;old_locus_tag=TthAA11_08900 NZ_AP024926.1 Protein Homology CDS 847259 848203 . - 0 ID=cds-WP_011172918.1;Parent=gene-LDO09_RS04575;Dbxref=Genbank:WP_011172918.1;Name=WP_011172918.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629747.1;locus_tag=LDO09_RS04575;product=polyamine aminopropyltransferase;protein_id=WP_011172918.1;transl_table=11 NZ_AP024926.1 RefSeq gene 848215 848616 . - . ID=gene-LDO09_RS04580;Name=LDO09_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04580;old_locus_tag=TthAA11_08910 NZ_AP024926.1 Protein Homology CDS 848215 848616 . - 0 ID=cds-WP_011172919.1;Parent=gene-LDO09_RS04580;Dbxref=Genbank:WP_011172919.1;Name=WP_011172919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172919.1;locus_tag=LDO09_RS04580;product=S-adenosylmethionine decarboxylase;protein_id=WP_011172919.1;transl_table=11 NZ_AP024926.1 RefSeq gene 848659 851262 . - . ID=gene-LDO09_RS04585;Name=LDO09_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04585;old_locus_tag=TthAA11_08920 NZ_AP024926.1 Protein Homology CDS 848659 851262 . - 0 ID=cds-WP_143585289.1;Parent=gene-LDO09_RS04585;Dbxref=Genbank:WP_143585289.1;Name=WP_143585289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172920.1;locus_tag=LDO09_RS04585;product=DNA translocase FtsK;protein_id=WP_143585289.1;transl_table=11 NZ_AP024926.1 RefSeq gene 851303 851794 . - . ID=gene-LDO09_RS04590;Name=LDO09_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04590;old_locus_tag=TthAA11_08930 NZ_AP024926.1 Protein Homology CDS 851303 851794 . - 0 ID=cds-WP_011172921.1;Parent=gene-LDO09_RS04590;Dbxref=Genbank:WP_011172921.1;Name=WP_011172921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629745.1;locus_tag=LDO09_RS04590;product=OmpH family outer membrane protein;protein_id=WP_011172921.1;transl_table=11 NZ_AP024926.1 RefSeq gene 851892 852338 . + . ID=gene-LDO09_RS04595;Name=LDO09_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04595;old_locus_tag=TthAA11_08940 NZ_AP024926.1 Protein Homology CDS 851892 852338 . + 0 ID=cds-WP_143585291.1;Parent=gene-LDO09_RS04595;Dbxref=Genbank:WP_143585291.1;Name=WP_143585291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629744.1;locus_tag=LDO09_RS04595;product=hypothetical protein;protein_id=WP_143585291.1;transl_table=11 NZ_AP024926.1 RefSeq gene 852427 853059 . + . ID=gene-LDO09_RS04600;Name=LDO09_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04600;old_locus_tag=TthAA11_08950 NZ_AP024926.1 Protein Homology CDS 852427 853059 . + 0 ID=cds-WP_011228227.1;Parent=gene-LDO09_RS04600;Dbxref=Genbank:WP_011228227.1;Name=WP_011228227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510185.1;locus_tag=LDO09_RS04600;product=CBS and ACT domain-containing protein;protein_id=WP_011228227.1;transl_table=11 NZ_AP024926.1 RefSeq gene 853067 854686 . - . ID=gene-LDO09_RS04605;Name=LDO09_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04605;old_locus_tag=TthAA11_08960 NZ_AP024926.1 Protein Homology CDS 853067 854686 . - 0 ID=cds-WP_143585293.1;Parent=gene-LDO09_RS04605;Dbxref=Genbank:WP_143585293.1;Name=WP_143585293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630613.1;locus_tag=LDO09_RS04605;product=hypothetical protein;protein_id=WP_143585293.1;transl_table=11 NZ_AP024926.1 RefSeq gene 854780 854873 . - . ID=gene-LDO09_RS04610;Name=LDO09_RS04610;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS04610;old_locus_tag=TthAA11_t00280 NZ_AP024926.1 tRNAscan-SE tRNA 854780 854873 . - . ID=rna-LDO09_RS04610;Parent=gene-LDO09_RS04610;anticodon=(pos:complement(854837..854839));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS04610;product=tRNA-Ser NZ_AP024926.1 tRNAscan-SE exon 854780 854873 . - . ID=exon-LDO09_RS04610-1;Parent=rna-LDO09_RS04610;anticodon=(pos:complement(854837..854839));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS04610;product=tRNA-Ser NZ_AP024926.1 RefSeq gene 854933 855622 . - . ID=gene-LDO09_RS04615;Name=LDO09_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04615;old_locus_tag=TthAA11_08970 NZ_AP024926.1 Protein Homology CDS 854933 855622 . - 0 ID=cds-WP_143584079.1-5;Parent=gene-LDO09_RS04615;Dbxref=Genbank:WP_143584079.1;Name=WP_143584079.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS04615;product=IS5-like element ISTth7 family transposase;protein_id=WP_143584079.1;transl_table=11 NZ_AP024926.1 RefSeq gene 855969 858425 . + . ID=gene-LDO09_RS04620;Name=LDO09_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04620;old_locus_tag=TthAA11_08990 NZ_AP024926.1 Protein Homology CDS 855969 858425 . + 0 ID=cds-WP_223969057.1;Parent=gene-LDO09_RS04620;Dbxref=Genbank:WP_223969057.1;Name=WP_223969057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630621.1;locus_tag=LDO09_RS04620;product=CBS domain-containing protein;protein_id=WP_223969057.1;transl_table=11 NZ_AP024926.1 RefSeq gene 858400 859005 . + . ID=gene-LDO09_RS04625;Name=LDO09_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04625;old_locus_tag=TthAA11_09000 NZ_AP024926.1 Protein Homology CDS 858400 859005 . + 0 ID=cds-WP_143585296.1;Parent=gene-LDO09_RS04625;Dbxref=Genbank:WP_143585296.1;Name=WP_143585296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172926.1;locus_tag=LDO09_RS04625;product=site-2 protease family protein;protein_id=WP_143585296.1;transl_table=11 NZ_AP024926.1 RefSeq gene 859002 859661 . + . ID=gene-LDO09_RS04630;Name=LDO09_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04630;old_locus_tag=TthAA11_09010 NZ_AP024926.1 Protein Homology CDS 859002 859661 . + 0 ID=cds-WP_143585298.1;Parent=gene-LDO09_RS04630;Dbxref=Genbank:WP_143585298.1;Name=WP_143585298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629739.1;locus_tag=LDO09_RS04630;product=site-2 protease family protein;protein_id=WP_143585298.1;transl_table=11 NZ_AP024926.1 RefSeq gene 859698 860510 . - . ID=gene-LDO09_RS04635;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=LDO09_RS04635;old_locus_tag=TthAA11_09020 NZ_AP024926.1 Protein Homology CDS 859698 860510 . - 0 ID=cds-WP_143585300.1;Parent=gene-LDO09_RS04635;Dbxref=Genbank:WP_143585300.1;Name=WP_143585300.1;gbkey=CDS;gene=nfo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172928.1;locus_tag=LDO09_RS04635;product=endonuclease IV;protein_id=WP_143585300.1;transl_table=11 NZ_AP024926.1 RefSeq gene 860536 861288 . - . ID=gene-LDO09_RS04640;Name=LDO09_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04640;old_locus_tag=TthAA11_09030 NZ_AP024926.1 Protein Homology CDS 860536 861288 . - 0 ID=cds-WP_143585302.1;Parent=gene-LDO09_RS04640;Dbxref=Genbank:WP_143585302.1;Name=WP_143585302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228232.1;locus_tag=LDO09_RS04640;product=sulfite exporter TauE/SafE family protein;protein_id=WP_143585302.1;transl_table=11 NZ_AP024926.1 RefSeq gene 861290 861946 . - . ID=gene-LDO09_RS04645;Name=LDO09_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04645;old_locus_tag=TthAA11_09040 NZ_AP024926.1 Protein Homology CDS 861290 861946 . - 0 ID=cds-WP_143585304.1;Parent=gene-LDO09_RS04645;Dbxref=Genbank:WP_143585304.1;Name=WP_143585304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629737.1;locus_tag=LDO09_RS04645;product=rhodanese-like domain-containing protein;protein_id=WP_143585304.1;transl_table=11 NZ_AP024926.1 RefSeq gene 862004 863440 . - . ID=gene-LDO09_RS04650;Name=LDO09_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04650;old_locus_tag=TthAA11_09050 NZ_AP024926.1 Protein Homology CDS 862004 863440 . - 0 ID=cds-WP_143585305.1;Parent=gene-LDO09_RS04650;Dbxref=Genbank:WP_143585305.1;Name=WP_143585305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629736.1;locus_tag=LDO09_RS04650;product=MBL fold metallo-hydrolase;protein_id=WP_143585305.1;transl_table=11 NZ_AP024926.1 RefSeq gene 863610 864299 . + . ID=gene-LDO09_RS04655;Name=LDO09_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04655;old_locus_tag=TthAA11_09060 NZ_AP024926.1 Protein Homology CDS 863610 864299 . + 0 ID=cds-WP_011172932.1;Parent=gene-LDO09_RS04655;Dbxref=Genbank:WP_011172932.1;Name=WP_011172932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228234.1;locus_tag=LDO09_RS04655;product=thioredoxin family protein;protein_id=WP_011172932.1;transl_table=11 NZ_AP024926.1 RefSeq gene 864301 864714 . + . ID=gene-LDO09_RS04660;Name=LDO09_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04660;old_locus_tag=TthAA11_09070 NZ_AP024926.1 Protein Homology CDS 864301 864714 . + 0 ID=cds-WP_143585308.1;Parent=gene-LDO09_RS04660;Dbxref=Genbank:WP_143585308.1;Name=WP_143585308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172933.1;locus_tag=LDO09_RS04660;product=rhodanese-like domain-containing protein;protein_id=WP_143585308.1;transl_table=11 NZ_AP024926.1 RefSeq gene 864714 865505 . + . ID=gene-LDO09_RS04665;Name=LDO09_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04665;old_locus_tag=TthAA11_09080 NZ_AP024926.1 Protein Homology CDS 864714 865505 . + 0 ID=cds-WP_014629733.1;Parent=gene-LDO09_RS04665;Dbxref=Genbank:WP_014629733.1;Name=WP_014629733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172934.1;locus_tag=LDO09_RS04665;product=TlpA disulfide reductase family protein;protein_id=WP_014629733.1;transl_table=11 NZ_AP024926.1 RefSeq gene 865502 866872 . - . ID=gene-LDO09_RS04670;Name=LDO09_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04670;old_locus_tag=TthAA11_09090 NZ_AP024926.1 Protein Homology CDS 865502 866872 . - 0 ID=cds-WP_143585310.1;Parent=gene-LDO09_RS04670;Dbxref=Genbank:WP_143585310.1;Name=WP_143585310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629732.1;locus_tag=LDO09_RS04670;product=SpoVR family protein;protein_id=WP_143585310.1;transl_table=11 NZ_AP024926.1 RefSeq gene 866874 867929 . - . ID=gene-LDO09_RS04675;Name=LDO09_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04675;old_locus_tag=TthAA11_09100 NZ_AP024926.1 Protein Homology CDS 866874 867929 . - 0 ID=cds-WP_014510194.1;Parent=gene-LDO09_RS04675;Dbxref=Genbank:WP_014510194.1;Name=WP_014510194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172936.1;locus_tag=LDO09_RS04675;product=DUF444 family protein;protein_id=WP_014510194.1;transl_table=11 NZ_AP024926.1 RefSeq gene 867931 869937 . - . ID=gene-LDO09_RS04680;Name=LDO09_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04680;old_locus_tag=TthAA11_09110 NZ_AP024926.1 Protein Homology CDS 867931 869937 . - 0 ID=cds-WP_223966544.1;Parent=gene-LDO09_RS04680;Dbxref=Genbank:WP_223966544.1;Name=WP_223966544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172937.1;locus_tag=LDO09_RS04680;product=serine protein kinase;protein_id=WP_223966544.1;transl_table=11 NZ_AP024926.1 RefSeq gene 870359 871048 . + . ID=gene-LDO09_RS04685;Name=LDO09_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04685;old_locus_tag=TthAA11_09130 NZ_AP024926.1 Protein Homology CDS 870359 871048 . + 0 ID=cds-WP_143584079.1-6;Parent=gene-LDO09_RS04685;Dbxref=Genbank:WP_143584079.1;Name=WP_143584079.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS04685;product=IS5-like element ISTth7 family transposase;protein_id=WP_143584079.1;transl_table=11 NZ_AP024926.1 RefSeq gene 871087 871635 . - . ID=gene-LDO09_RS04690;Name=LDO09_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04690;old_locus_tag=TthAA11_09140 NZ_AP024926.1 Protein Homology CDS 871087 871635 . - 0 ID=cds-WP_223966546.1;Parent=gene-LDO09_RS04690;Dbxref=Genbank:WP_223966546.1;Name=WP_223966546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228239.1;locus_tag=LDO09_RS04690;product=CPBP family intramembrane metalloprotease;protein_id=WP_223966546.1;transl_table=11 NZ_AP024926.1 RefSeq gene 871632 871910 . - . ID=gene-LDO09_RS04695;Name=LDO09_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04695;old_locus_tag=TthAA11_09150 NZ_AP024926.1 Protein Homology CDS 871632 871910 . - 0 ID=cds-WP_223966548.1;Parent=gene-LDO09_RS04695;Dbxref=Genbank:WP_223966548.1;Name=WP_223966548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630655.1;locus_tag=LDO09_RS04695;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_223966548.1;transl_table=11 NZ_AP024926.1 RefSeq gene 871907 872659 . - . ID=gene-LDO09_RS04700;Name=LDO09_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04700;old_locus_tag=TthAA11_09160 NZ_AP024926.1 Protein Homology CDS 871907 872659 . - 0 ID=cds-WP_223966550.1;Parent=gene-LDO09_RS04700;Dbxref=Genbank:WP_223966550.1;Name=WP_223966550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329122.1;locus_tag=LDO09_RS04700;product=MBL fold metallo-hydrolase;protein_id=WP_223966550.1;transl_table=11 NZ_AP024926.1 RefSeq gene 872675 873361 . - . ID=gene-LDO09_RS04705;Name=LDO09_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04705;old_locus_tag=TthAA11_09170 NZ_AP024926.1 Protein Homology CDS 872675 873361 . - 0 ID=cds-WP_014510198.1;Parent=gene-LDO09_RS04705;Dbxref=Genbank:WP_014510198.1;Name=WP_014510198.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228242.1;locus_tag=LDO09_RS04705;product=metallophosphoesterase;protein_id=WP_014510198.1;transl_table=11 NZ_AP024926.1 RefSeq gene 873379 873807 . + . ID=gene-LDO09_RS04710;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=LDO09_RS04710;old_locus_tag=TthAA11_09180 NZ_AP024926.1 Protein Homology CDS 873379 873807 . + 0 ID=cds-WP_143585316.1;Parent=gene-LDO09_RS04710;Dbxref=Genbank:WP_143585316.1;Name=WP_143585316.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510199.1;locus_tag=LDO09_RS04710;product=recombination regulator RecX;protein_id=WP_143585316.1;transl_table=11 NZ_AP024926.1 RefSeq gene 873811 874254 . + . ID=gene-LDO09_RS04715;Name=LDO09_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04715;old_locus_tag=TthAA11_09190 NZ_AP024926.1 Protein Homology CDS 873811 874254 . + 0 ID=cds-WP_060384525.1;Parent=gene-LDO09_RS04715;Dbxref=Genbank:WP_060384525.1;Name=WP_060384525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510200.1;locus_tag=LDO09_RS04715;product=SRPBCC family protein;protein_id=WP_060384525.1;transl_table=11 NZ_AP024926.1 RefSeq gene 874337 874609 . + . ID=gene-LDO09_RS04720;Name=LDO09_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04720;old_locus_tag=TthAA11_09200 NZ_AP024926.1 Protein Homology CDS 874337 874609 . + 0 ID=cds-WP_008630673.1;Parent=gene-LDO09_RS04720;Dbxref=Genbank:WP_008630673.1;Name=WP_008630673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003044778.1;locus_tag=LDO09_RS04720;product=stage V sporulation protein S;protein_id=WP_008630673.1;transl_table=11 NZ_AP024926.1 RefSeq gene 874606 875802 . + . ID=gene-LDO09_RS04725;Name=LDO09_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04725;old_locus_tag=TthAA11_09210 NZ_AP024926.1 Protein Homology CDS 874606 875802 . + 0 ID=cds-WP_143585318.1;Parent=gene-LDO09_RS04725;Dbxref=Genbank:WP_143585318.1;Name=WP_143585318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172944.1;locus_tag=LDO09_RS04725;product=MFS transporter;protein_id=WP_143585318.1;transl_table=11 NZ_AP024926.1 RefSeq gene 875799 876584 . + . ID=gene-LDO09_RS04730;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LDO09_RS04730;old_locus_tag=TthAA11_09220 NZ_AP024926.1 Protein Homology CDS 875799 876584 . + 0 ID=cds-WP_143585320.1;Parent=gene-LDO09_RS04730;Dbxref=Genbank:WP_143585320.1;Name=WP_143585320.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228245.1;locus_tag=LDO09_RS04730;product=pyrroline-5-carboxylate reductase;protein_id=WP_143585320.1;transl_table=11 NZ_AP024926.1 RefSeq gene 876685 877218 . + . ID=gene-LDO09_RS04735;Name=LDO09_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04735;old_locus_tag=TthAA11_09230 NZ_AP024926.1 Protein Homology CDS 876685 877218 . + 0 ID=cds-WP_172619177.1;Parent=gene-LDO09_RS04735;Dbxref=Genbank:WP_172619177.1;Name=WP_172619177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510203.1;locus_tag=LDO09_RS04735;product=hypothetical protein;protein_id=WP_172619177.1;transl_table=11 NZ_AP024926.1 RefSeq gene 877205 877834 . - . ID=gene-LDO09_RS04740;Name=LDO09_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04740;old_locus_tag=TthAA11_09240 NZ_AP024926.1 Protein Homology CDS 877205 877834 . - 0 ID=cds-WP_014629722.1;Parent=gene-LDO09_RS04740;Dbxref=Genbank:WP_014629722.1;Name=WP_014629722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172947.1;locus_tag=LDO09_RS04740;product=glycosyltransferase;protein_id=WP_014629722.1;transl_table=11 NZ_AP024926.1 RefSeq gene 877836 878846 . - . ID=gene-LDO09_RS04745;Name=LDO09_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04745;old_locus_tag=TthAA11_09250 NZ_AP024926.1 Protein Homology CDS 877836 878846 . - 0 ID=cds-WP_143585326.1;Parent=gene-LDO09_RS04745;Dbxref=Genbank:WP_143585326.1;Name=WP_143585326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003044764.1;locus_tag=LDO09_RS04745;product=M50 family metallopeptidase;protein_id=WP_143585326.1;transl_table=11 NZ_AP024926.1 RefSeq gene 878843 879946 . - . ID=gene-LDO09_RS04750;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=LDO09_RS04750;old_locus_tag=TthAA11_09260 NZ_AP024926.1 Protein Homology CDS 878843 879946 . - 0 ID=cds-WP_143585328.1;Parent=gene-LDO09_RS04750;Dbxref=Genbank:WP_143585328.1;Name=WP_143585328.1;Ontology_term=GO:0019288,GO:0030604,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329555.1;locus_tag=LDO09_RS04750;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_143585328.1;transl_table=11 NZ_AP024926.1 RefSeq gene 879943 880767 . - . ID=gene-LDO09_RS04755;Name=LDO09_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04755;old_locus_tag=TthAA11_09270 NZ_AP024926.1 Protein Homology CDS 879943 880767 . - 0 ID=cds-WP_014629719.1;Parent=gene-LDO09_RS04755;Dbxref=Genbank:WP_014629719.1;Name=WP_014629719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172950.1;locus_tag=LDO09_RS04755;product=CDP-archaeol synthase;protein_id=WP_014629719.1;transl_table=11 NZ_AP024926.1 RefSeq gene 880807 881364 . - . ID=gene-LDO09_RS04760;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LDO09_RS04760;old_locus_tag=TthAA11_09280 NZ_AP024926.1 Protein Homology CDS 880807 881364 . - 0 ID=cds-WP_096410712.1;Parent=gene-LDO09_RS04760;Dbxref=Genbank:WP_096410712.1;Name=WP_096410712.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172951.1;locus_tag=LDO09_RS04760;product=ribosome recycling factor;protein_id=WP_096410712.1;transl_table=11 NZ_AP024926.1 RefSeq gene 881377 882078 . - . ID=gene-LDO09_RS04765;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LDO09_RS04765;old_locus_tag=TthAA11_09290 NZ_AP024926.1 Protein Homology CDS 881377 882078 . - 0 ID=cds-WP_011172952.1;Parent=gene-LDO09_RS04765;Dbxref=Genbank:WP_011172952.1;Name=WP_011172952.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172952.1;locus_tag=LDO09_RS04765;product=UMP kinase;protein_id=WP_011172952.1;transl_table=11 NZ_AP024926.1 RefSeq gene 882135 882725 . - . ID=gene-LDO09_RS04770;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LDO09_RS04770;old_locus_tag=TthAA11_09300 NZ_AP024926.1 Protein Homology CDS 882135 882725 . - 0 ID=cds-WP_011172953.1;Parent=gene-LDO09_RS04770;Dbxref=Genbank:WP_011172953.1;Name=WP_011172953.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228249.1;locus_tag=LDO09_RS04770;product=translation elongation factor Ts;protein_id=WP_011172953.1;transl_table=11 NZ_AP024926.1 RefSeq gene 882722 883492 . - . ID=gene-LDO09_RS04775;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LDO09_RS04775;old_locus_tag=TthAA11_09310 NZ_AP024926.1 Protein Homology CDS 882722 883492 . - 0 ID=cds-WP_011172954.1;Parent=gene-LDO09_RS04775;Dbxref=Genbank:WP_011172954.1;Name=WP_011172954.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510210.1;locus_tag=LDO09_RS04775;product=30S ribosomal protein S2;protein_id=WP_011172954.1;transl_table=11 NZ_AP024926.1 RefSeq gene 883677 883751 . + . ID=gene-LDO09_RS04780;Name=LDO09_RS04780;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS04780;old_locus_tag=TthAA11_t00290 NZ_AP024926.1 tRNAscan-SE tRNA 883677 883751 . + . ID=rna-LDO09_RS04780;Parent=gene-LDO09_RS04780;anticodon=(pos:883709..883711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS04780;product=tRNA-Ala NZ_AP024926.1 tRNAscan-SE exon 883677 883751 . + . ID=exon-LDO09_RS04780-1;Parent=rna-LDO09_RS04780;anticodon=(pos:883709..883711);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS04780;product=tRNA-Ala NZ_AP024926.1 RefSeq gene 883829 885007 . - . ID=gene-LDO09_RS04785;Name=LDO09_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04785;old_locus_tag=TthAA11_09320 NZ_AP024926.1 Protein Homology CDS 883829 885007 . - 0 ID=cds-WP_223966564.1;Parent=gene-LDO09_RS04785;Dbxref=Genbank:WP_223966564.1;Name=WP_223966564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174228.1;locus_tag=LDO09_RS04785;product=site-specific integrase;protein_id=WP_223966564.1;transl_table=11 NZ_AP024926.1 RefSeq gene 884997 885236 . - . ID=gene-LDO09_RS04790;Name=LDO09_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04790;old_locus_tag=TthAA11_09330 NZ_AP024926.1 Protein Homology CDS 884997 885236 . - 0 ID=cds-WP_223966566.1;Parent=gene-LDO09_RS04790;Dbxref=Genbank:WP_223966566.1;Name=WP_223966566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329889.1;locus_tag=LDO09_RS04790;product=hypothetical protein;protein_id=WP_223966566.1;transl_table=11 NZ_AP024926.1 RefSeq gene 885355 885549 . + . ID=gene-LDO09_RS04795;Name=LDO09_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04795;old_locus_tag=TthAA11_09340 NZ_AP024926.1 GeneMarkS-2+ CDS 885355 885549 . + 0 ID=cds-WP_223966568.1;Parent=gene-LDO09_RS04795;Dbxref=Genbank:WP_223966568.1;Name=WP_223966568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS04795;product=hypothetical protein;protein_id=WP_223966568.1;transl_table=11 NZ_AP024926.1 RefSeq gene 885603 885845 . + . ID=gene-LDO09_RS04800;Name=LDO09_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04800;old_locus_tag=TthAA11_09350 NZ_AP024926.1 GeneMarkS-2+ CDS 885603 885845 . + 0 ID=cds-WP_223966570.1;Parent=gene-LDO09_RS04800;Dbxref=Genbank:WP_223966570.1;Name=WP_223966570.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS04800;product=hypothetical protein;protein_id=WP_223966570.1;transl_table=11 NZ_AP024926.1 RefSeq gene 885912 886412 . - . ID=gene-LDO09_RS04805;Name=LDO09_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04805;old_locus_tag=TthAA11_09360 NZ_AP024926.1 GeneMarkS-2+ CDS 885912 886412 . - 0 ID=cds-WP_223966572.1;Parent=gene-LDO09_RS04805;Dbxref=Genbank:WP_223966572.1;Name=WP_223966572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS04805;product=hypothetical protein;protein_id=WP_223966572.1;transl_table=11 NZ_AP024926.1 RefSeq gene 886500 886883 . + . ID=gene-LDO09_RS04810;Name=LDO09_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04810;old_locus_tag=TthAA11_09370 NZ_AP024926.1 GeneMarkS-2+ CDS 886500 886883 . + 0 ID=cds-WP_223966574.1;Parent=gene-LDO09_RS04810;Dbxref=Genbank:WP_223966574.1;Name=WP_223966574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS04810;product=hypothetical protein;protein_id=WP_223966574.1;transl_table=11 NZ_AP024926.1 RefSeq gene 886880 887377 . + . ID=gene-LDO09_RS04815;Name=LDO09_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04815;old_locus_tag=TthAA11_09380 NZ_AP024926.1 GeneMarkS-2+ CDS 886880 887377 . + 0 ID=cds-WP_223966575.1;Parent=gene-LDO09_RS04815;Dbxref=Genbank:WP_223966575.1;Name=WP_223966575.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS04815;product=hypothetical protein;protein_id=WP_223966575.1;transl_table=11 NZ_AP024926.1 RefSeq gene 887508 887894 . + . ID=gene-LDO09_RS04820;Name=LDO09_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04820;old_locus_tag=TthAA11_09390 NZ_AP024926.1 GeneMarkS-2+ CDS 887508 887894 . + 0 ID=cds-WP_223969059.1;Parent=gene-LDO09_RS04820;Dbxref=Genbank:WP_223969059.1;Name=WP_223969059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS04820;product=hypothetical protein;protein_id=WP_223969059.1;transl_table=11 NZ_AP024926.1 RefSeq gene 887866 888057 . - . ID=gene-LDO09_RS04825;Name=LDO09_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04825;old_locus_tag=TthAA11_09400 NZ_AP024926.1 Protein Homology CDS 887866 888057 . - 0 ID=cds-WP_223969061.1;Parent=gene-LDO09_RS04825;Dbxref=Genbank:WP_223969061.1;Name=WP_223969061.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019540.2;locus_tag=LDO09_RS04825;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_223969061.1;transl_table=11 NZ_AP024926.1 RefSeq gene 888077 888286 . - . ID=gene-LDO09_RS04830;Name=LDO09_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04830;old_locus_tag=TthAA11_09410 NZ_AP024926.1 Protein Homology CDS 888077 888286 . - 0 ID=cds-WP_223966577.1;Parent=gene-LDO09_RS04830;Dbxref=Genbank:WP_223966577.1;Name=WP_223966577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717569.1;locus_tag=LDO09_RS04830;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_223966577.1;transl_table=11 NZ_AP024926.1 RefSeq gene 888324 888899 . - . ID=gene-LDO09_RS04835;Name=LDO09_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04835;old_locus_tag=TthAA11_09420 NZ_AP024926.1 GeneMarkS-2+ CDS 888324 888899 . - 0 ID=cds-WP_223966579.1;Parent=gene-LDO09_RS04835;Dbxref=Genbank:WP_223966579.1;Name=WP_223966579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS04835;product=hypothetical protein;protein_id=WP_223966579.1;transl_table=11 NZ_AP024926.1 RefSeq gene 888890 890059 . - . ID=gene-LDO09_RS12070;Name=LDO09_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12070;old_locus_tag=TthAA11_09430 NZ_AP024926.1 Protein Homology CDS 888890 890059 . - 0 ID=cds-WP_267461194.1;Parent=gene-LDO09_RS12070;Dbxref=Genbank:WP_267461194.1;Name=WP_267461194.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024872.2;locus_tag=LDO09_RS12070;product=AAA family ATPase;protein_id=WP_267461194.1;transl_table=11 NZ_AP024926.1 RefSeq gene 890060 891061 . - . ID=gene-LDO09_RS04845;Name=LDO09_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04845;old_locus_tag=TthAA11_09440 NZ_AP024926.1 Protein Homology CDS 890060 891061 . - 0 ID=cds-WP_223969063.1;Parent=gene-LDO09_RS04845;Dbxref=Genbank:WP_223969063.1;Name=WP_223969063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046664.1;locus_tag=LDO09_RS04845;product=bifunctional DNA primase/polymerase;protein_id=WP_223969063.1;transl_table=11 NZ_AP024926.1 RefSeq gene 891336 891524 . - . ID=gene-LDO09_RS04850;Name=LDO09_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04850;old_locus_tag=TthAA11_09460 NZ_AP024926.1 GeneMarkS-2+ CDS 891336 891524 . - 0 ID=cds-WP_223969065.1;Parent=gene-LDO09_RS04850;Dbxref=Genbank:WP_223969065.1;Name=WP_223969065.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS04850;product=hypothetical protein;protein_id=WP_223969065.1;transl_table=11 NZ_AP024926.1 RefSeq gene 891668 891880 . - . ID=gene-LDO09_RS04855;Name=LDO09_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04855;old_locus_tag=TthAA11_09470 NZ_AP024926.1 Protein Homology CDS 891668 891880 . - 0 ID=cds-WP_172967270.1;Parent=gene-LDO09_RS04855;Dbxref=Genbank:WP_172967270.1;Name=WP_172967270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024139.2;locus_tag=LDO09_RS04855;product=helix-turn-helix domain-containing protein;protein_id=WP_172967270.1;transl_table=11 NZ_AP024926.1 RefSeq gene 892362 892916 . + . ID=gene-LDO09_RS04860;Name=LDO09_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04860 NZ_AP024926.1 GeneMarkS-2+ CDS 892362 892916 . + 0 ID=cds-WP_223966587.1;Parent=gene-LDO09_RS04860;Dbxref=Genbank:WP_223966587.1;Name=WP_223966587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS04860;product=hypothetical protein;protein_id=WP_223966587.1;transl_table=11 NZ_AP024926.1 RefSeq gene 893147 894445 . - . ID=gene-LDO09_RS04865;Name=LDO09_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04865;old_locus_tag=TthAA11_09490 NZ_AP024926.1 Protein Homology CDS 893147 894445 . - 0 ID=cds-WP_143585332.1;Parent=gene-LDO09_RS04865;Dbxref=Genbank:WP_143585332.1;Name=WP_143585332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510211.1;locus_tag=LDO09_RS04865;product=acetyl ornithine aminotransferase family protein;protein_id=WP_143585332.1;transl_table=11 NZ_AP024926.1 RefSeq gene 894563 895111 . - . ID=gene-LDO09_RS04870;Name=LDO09_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04870;old_locus_tag=TthAA11_09500 NZ_AP024926.1 Protein Homology CDS 894563 895111 . - 0 ID=cds-WP_143585334.1;Parent=gene-LDO09_RS04870;Dbxref=Genbank:WP_143585334.1;Name=WP_143585334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228251.1;locus_tag=LDO09_RS04870;product=NUDIX hydrolase;protein_id=WP_143585334.1;transl_table=11 NZ_AP024926.1 RefSeq gene 895108 895494 . - . ID=gene-LDO09_RS04875;Name=LDO09_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04875;old_locus_tag=TthAA11_09510 NZ_AP024926.1 Protein Homology CDS 895108 895494 . - 0 ID=cds-WP_011172957.1;Parent=gene-LDO09_RS04875;Dbxref=Genbank:WP_011172957.1;Name=WP_011172957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172957.1;locus_tag=LDO09_RS04875;product=GatB/YqeY domain-containing protein;protein_id=WP_011172957.1;transl_table=11 NZ_AP024926.1 RefSeq gene 895556 897148 . + . ID=gene-LDO09_RS04880;Name=LDO09_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04880;old_locus_tag=TthAA11_09520 NZ_AP024926.1 Protein Homology CDS 895556 897148 . + 0 ID=cds-WP_143585337.1;Parent=gene-LDO09_RS04880;Dbxref=Genbank:WP_143585337.1;Name=WP_143585337.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510213.1;locus_tag=LDO09_RS04880;product=aldehyde dehydrogenase family protein;protein_id=WP_143585337.1;transl_table=11 NZ_AP024926.1 RefSeq gene 897250 897618 . - . ID=gene-LDO09_RS04885;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=LDO09_RS04885;old_locus_tag=TthAA11_09530 NZ_AP024926.1 Protein Homology CDS 897250 897618 . - 0 ID=cds-WP_011172959.1;Parent=gene-LDO09_RS04885;Dbxref=Genbank:WP_011172959.1;Name=WP_011172959.1;Ontology_term=GO:0009073,GO:0004106;gbkey=CDS;gene=aroH;go_function=chorismate mutase activity|0004106||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172959.1;locus_tag=LDO09_RS04885;product=chorismate mutase;protein_id=WP_011172959.1;transl_table=11 NZ_AP024926.1 RefSeq gene 897688 898353 . + . ID=gene-LDO09_RS04890;Name=LDO09_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04890 NZ_AP024926.1 Protein Homology CDS 897688 898353 . + 0 ID=cds-WP_014510215.1;Parent=gene-LDO09_RS04890;Dbxref=Genbank:WP_014510215.1;Name=WP_014510215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629712.1;locus_tag=LDO09_RS04890;product=PIG-L family deacetylase;protein_id=WP_014510215.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 898409 899521 . - . ID=gene-LDO09_RS04895;Name=LDO09_RS04895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS04895;old_locus_tag=TthAA11_09550;partial=true;pseudo=true;start_range=.,898409 NZ_AP024926.1 Protein Homology CDS 898409 899521 . - 0 ID=cds-LDO09_RS04895;Parent=gene-LDO09_RS04895;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012861.2;locus_tag=LDO09_RS04895;partial=true;product=chloride channel protein;pseudo=true;start_range=.,898409;transl_table=11 NZ_AP024926.1 RefSeq gene 899521 900630 . - . ID=gene-LDO09_RS04900;Name=LDO09_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04900;old_locus_tag=TthAA11_09560 NZ_AP024926.1 Protein Homology CDS 899521 900630 . - 0 ID=cds-WP_143585339.1;Parent=gene-LDO09_RS04900;Dbxref=Genbank:WP_143585339.1;Name=WP_143585339.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629710.1;locus_tag=LDO09_RS04900;product=amidohydrolase family protein;protein_id=WP_143585339.1;transl_table=11 NZ_AP024926.1 RefSeq gene 900611 901393 . - . ID=gene-LDO09_RS04905;Name=LDO09_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04905;old_locus_tag=TthAA11_09570 NZ_AP024926.1 Protein Homology CDS 900611 901393 . - 0 ID=cds-WP_143585341.1;Parent=gene-LDO09_RS04905;Dbxref=Genbank:WP_143585341.1;Name=WP_143585341.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510218.1;locus_tag=LDO09_RS04905;product=GNAT family N-acetyltransferase;protein_id=WP_143585341.1;transl_table=11 NZ_AP024926.1 RefSeq gene 901366 902475 . - . ID=gene-LDO09_RS04910;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=LDO09_RS04910;old_locus_tag=TthAA11_09580 NZ_AP024926.1 Protein Homology CDS 901366 902475 . - 0 ID=cds-WP_223966593.1;Parent=gene-LDO09_RS04910;Dbxref=Genbank:WP_223966593.1;Name=WP_223966593.1;Ontology_term=GO:0009234,GO:0016836;gbkey=CDS;gene=menC;go_function=hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515562.1;locus_tag=LDO09_RS04910;product=o-succinylbenzoate synthase;protein_id=WP_223966593.1;transl_table=11 NZ_AP024926.1 RefSeq gene 902466 903731 . - . ID=gene-LDO09_RS04915;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LDO09_RS04915;old_locus_tag=TthAA11_09590 NZ_AP024926.1 Protein Homology CDS 902466 903731 . - 0 ID=cds-WP_014629707.1;Parent=gene-LDO09_RS04915;Dbxref=Genbank:WP_014629707.1;Name=WP_014629707.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228260.1;locus_tag=LDO09_RS04915;product=serine--tRNA ligase;protein_id=WP_014629707.1;transl_table=11 NZ_AP024926.1 RefSeq gene 903734 904003 . - . ID=gene-LDO09_RS04920;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=LDO09_RS04920;old_locus_tag=TthAA11_09600 NZ_AP024926.1 Protein Homology CDS 903734 904003 . - 0 ID=cds-WP_014629706.1;Parent=gene-LDO09_RS04920;Dbxref=Genbank:WP_014629706.1;Name=WP_014629706.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024119135.1;locus_tag=LDO09_RS04920;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_014629706.1;transl_table=11 NZ_AP024926.1 RefSeq gene 904014 904757 . - . ID=gene-LDO09_RS04925;Name=LDO09_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04925;old_locus_tag=TthAA11_09610 NZ_AP024926.1 Protein Homology CDS 904014 904757 . - 0 ID=cds-WP_014629705.1;Parent=gene-LDO09_RS04925;Dbxref=Genbank:WP_014629705.1;Name=WP_014629705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228262.1;locus_tag=LDO09_RS04925;product=DUF554 domain-containing protein;protein_id=WP_014629705.1;transl_table=11 NZ_AP024926.1 RefSeq gene 904779 905432 . + . ID=gene-LDO09_RS04930;Name=mnmD;gbkey=Gene;gene=mnmD;gene_biotype=protein_coding;locus_tag=LDO09_RS04930;old_locus_tag=TthAA11_09620 NZ_AP024926.1 Protein Homology CDS 904779 905432 . + 0 ID=cds-WP_223966595.1;Parent=gene-LDO09_RS04930;Dbxref=Genbank:WP_223966595.1;Name=WP_223966595.1;Ontology_term=GO:0016645;gbkey=CDS;gene=mnmD;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228263.1;locus_tag=LDO09_RS04930;product=tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD;protein_id=WP_223966595.1;transl_table=11 NZ_AP024926.1 RefSeq gene 905329 906522 . - . ID=gene-LDO09_RS04935;Name=LDO09_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04935;old_locus_tag=TthAA11_09630 NZ_AP024926.1 Protein Homology CDS 905329 906522 . - 0 ID=cds-WP_223966597.1;Parent=gene-LDO09_RS04935;Dbxref=Genbank:WP_223966597.1;Name=WP_223966597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228264.1;locus_tag=LDO09_RS04935;product=polysaccharide deacetylase family protein;protein_id=WP_223966597.1;transl_table=11 NZ_AP024926.1 RefSeq gene 906522 907694 . - . ID=gene-LDO09_RS04940;Name=LDO09_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04940;old_locus_tag=TthAA11_09640 NZ_AP024926.1 Protein Homology CDS 906522 907694 . - 0 ID=cds-WP_024119132.1;Parent=gene-LDO09_RS04940;Dbxref=Genbank:WP_024119132.1;Name=WP_024119132.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228265.1;locus_tag=LDO09_RS04940;product=MFS transporter;protein_id=WP_024119132.1;transl_table=11 NZ_AP024926.1 RefSeq gene 907709 908392 . + . ID=gene-LDO09_RS04945;Name=LDO09_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04945;old_locus_tag=TthAA11_09650 NZ_AP024926.1 Protein Homology CDS 907709 908392 . + 0 ID=cds-WP_223966599.1;Parent=gene-LDO09_RS04945;Dbxref=Genbank:WP_223966599.1;Name=WP_223966599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629701.1;locus_tag=LDO09_RS04945;product=glycosyltransferase family A protein;protein_id=WP_223966599.1;transl_table=11 NZ_AP024926.1 RefSeq gene 908331 909542 . - . ID=gene-LDO09_RS04950;Name=LDO09_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04950;old_locus_tag=TthAA11_09660 NZ_AP024926.1 Protein Homology CDS 908331 909542 . - 0 ID=cds-WP_223966601.1;Parent=gene-LDO09_RS04950;Dbxref=Genbank:WP_223966601.1;Name=WP_223966601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515568.1;locus_tag=LDO09_RS04950;product=glycosyltransferase family 4 protein;protein_id=WP_223966601.1;transl_table=11 NZ_AP024926.1 RefSeq gene 909553 910425 . - . ID=gene-LDO09_RS04955;Name=LDO09_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04955;old_locus_tag=TthAA11_09670 NZ_AP024926.1 Protein Homology CDS 909553 910425 . - 0 ID=cds-WP_143585357.1;Parent=gene-LDO09_RS04955;Dbxref=Genbank:WP_143585357.1;Name=WP_143585357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510228.1;locus_tag=LDO09_RS04955;product=glycosyltransferase family 2 protein;protein_id=WP_143585357.1;transl_table=11 NZ_AP024926.1 RefSeq gene 910418 911536 . - . ID=gene-LDO09_RS04960;Name=glf;gbkey=Gene;gene=glf;gene_biotype=protein_coding;locus_tag=LDO09_RS04960;old_locus_tag=TthAA11_09680 NZ_AP024926.1 Protein Homology CDS 910418 911536 . - 0 ID=cds-WP_223969068.1;Parent=gene-LDO09_RS04960;Dbxref=Genbank:WP_223969068.1;Name=WP_223969068.1;Ontology_term=GO:0009273,GO:0008767;gbkey=CDS;gene=glf;go_function=UDP-galactopyranose mutase activity|0008767||IEA;go_process=peptidoglycan-based cell wall biogenesis|0009273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228271.1;locus_tag=LDO09_RS04960;product=UDP-galactopyranose mutase;protein_id=WP_223969068.1;transl_table=11 NZ_AP024926.1 RefSeq gene 911533 912582 . - . ID=gene-LDO09_RS04965;Name=LDO09_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04965;old_locus_tag=TthAA11_09690 NZ_AP024926.1 Protein Homology CDS 911533 912582 . - 0 ID=cds-WP_143585361.1;Parent=gene-LDO09_RS04965;Dbxref=Genbank:WP_143585361.1;Name=WP_143585361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228272.1;locus_tag=LDO09_RS04965;product=glycosyltransferase family 4 protein;protein_id=WP_143585361.1;transl_table=11 NZ_AP024926.1 RefSeq gene 912579 913157 . - . ID=gene-LDO09_RS04970;Name=LDO09_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04970;old_locus_tag=TthAA11_09700 NZ_AP024926.1 Protein Homology CDS 912579 913157 . - 0 ID=cds-WP_201351364.1;Parent=gene-LDO09_RS04970;Dbxref=Genbank:WP_201351364.1;Name=WP_201351364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172976.1;locus_tag=LDO09_RS04970;product=pyroglutamyl-peptidase I;protein_id=WP_201351364.1;transl_table=11 NZ_AP024926.1 RefSeq gene 913249 914085 . + . ID=gene-LDO09_RS04975;Name=LDO09_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04975;old_locus_tag=TthAA11_09710 NZ_AP024926.1 Protein Homology CDS 913249 914085 . + 0 ID=cds-WP_143584783.1;Parent=gene-LDO09_RS04975;Dbxref=Genbank:WP_143584783.1;Name=WP_143584783.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511377.1;locus_tag=LDO09_RS04975;product=IS982 family transposase;protein_id=WP_143584783.1;transl_table=11 NZ_AP024926.1 RefSeq gene 914109 914945 . + . ID=gene-LDO09_RS04980;Name=LDO09_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04980;old_locus_tag=TthAA11_09720 NZ_AP024926.1 Protein Homology CDS 914109 914945 . + 0 ID=cds-WP_223966618.1;Parent=gene-LDO09_RS04980;Dbxref=Genbank:WP_223966618.1;Name=WP_223966618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329752.1;locus_tag=LDO09_RS04980;product=DegV family protein;protein_id=WP_223966618.1;transl_table=11 NZ_AP024926.1 RefSeq gene 914973 917909 . + . ID=gene-LDO09_RS04985;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LDO09_RS04985;old_locus_tag=TthAA11_09730 NZ_AP024926.1 Protein Homology CDS 914973 917909 . + 0 ID=cds-WP_223969070.1;Parent=gene-LDO09_RS04985;Dbxref=Genbank:WP_223969070.1;Name=WP_223969070.1;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172978.1;locus_tag=LDO09_RS04985;product=transcription-repair coupling factor;protein_id=WP_223969070.1;transl_table=11 NZ_AP024926.1 RefSeq gene 918084 920372 . + . ID=gene-LDO09_RS04990;Name=LDO09_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04990;old_locus_tag=TthAA11_09740 NZ_AP024926.1 Protein Homology CDS 918084 920372 . + 0 ID=cds-WP_223969072.1;Parent=gene-LDO09_RS04990;Dbxref=Genbank:WP_223969072.1;Name=WP_223969072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717213.1;locus_tag=LDO09_RS04990;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=WP_223969072.1;transl_table=11 NZ_AP024926.1 RefSeq gene 920385 921578 . + . ID=gene-LDO09_RS04995;Name=LDO09_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS04995;old_locus_tag=TthAA11_09750 NZ_AP024926.1 Protein Homology CDS 920385 921578 . + 0 ID=cds-WP_143585369.1;Parent=gene-LDO09_RS04995;Dbxref=Genbank:WP_143585369.1;Name=WP_143585369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003045613.1;locus_tag=LDO09_RS04995;product=thiolase family protein;protein_id=WP_143585369.1;transl_table=11 NZ_AP024926.1 RefSeq gene 921589 923319 . + . ID=gene-LDO09_RS05000;Name=LDO09_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05000;old_locus_tag=TthAA11_09760 NZ_AP024926.1 Protein Homology CDS 921589 923319 . + 0 ID=cds-WP_143585371.1;Parent=gene-LDO09_RS05000;Dbxref=Genbank:WP_143585371.1;Name=WP_143585371.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461437.1;locus_tag=LDO09_RS05000;product=acyl-CoA dehydrogenase family protein;protein_id=WP_143585371.1;transl_table=11 NZ_AP024926.1 RefSeq gene 923362 924804 . - . ID=gene-LDO09_RS05005;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LDO09_RS05005;old_locus_tag=TthAA11_09770 NZ_AP024926.1 Protein Homology CDS 923362 924804 . - 0 ID=cds-WP_143585373.1;Parent=gene-LDO09_RS05005;Dbxref=Genbank:WP_143585373.1;Name=WP_143585373.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013703943.1;locus_tag=LDO09_RS05005;product=cysteine--tRNA ligase;protein_id=WP_143585373.1;transl_table=11 NZ_AP024926.1 RefSeq gene 924841 925866 . + . ID=gene-LDO09_RS05010;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=LDO09_RS05010;old_locus_tag=TthAA11_09780 NZ_AP024926.1 Protein Homology CDS 924841 925866 . + 0 ID=cds-WP_143585375.1;Parent=gene-LDO09_RS05010;Dbxref=Genbank:WP_143585375.1;Name=WP_143585375.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112342.1;locus_tag=LDO09_RS05010;product=Hsp33 family molecular chaperone HslO;protein_id=WP_143585375.1;transl_table=11 NZ_AP024926.1 RefSeq gene 925879 926292 . + . ID=gene-LDO09_RS05015;Name=LDO09_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05015;old_locus_tag=TthAA11_09790 NZ_AP024926.1 Protein Homology CDS 925879 926292 . + 0 ID=cds-WP_143585377.1;Parent=gene-LDO09_RS05015;Dbxref=Genbank:WP_143585377.1;Name=WP_143585377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112343.1;locus_tag=LDO09_RS05015;product=universal stress protein;protein_id=WP_143585377.1;transl_table=11 NZ_AP024926.1 RefSeq gene 926473 927159 . + . ID=gene-LDO09_RS05020;Name=LDO09_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05020;old_locus_tag=TthAA11_09800 NZ_AP024926.1 Protein Homology CDS 926473 927159 . + 0 ID=cds-WP_223969075.1;Parent=gene-LDO09_RS05020;Dbxref=Genbank:WP_223969075.1;Name=WP_223969075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717261.1;locus_tag=LDO09_RS05020;product=zinc metallopeptidase;protein_id=WP_223969075.1;transl_table=11 NZ_AP024926.1 RefSeq gene 927160 927243 . + . ID=gene-LDO09_RS12075;Name=LDO09_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12075 NZ_AP024926.1 Protein Homology CDS 927160 927243 . + 0 ID=cds-WP_267461197.1;Parent=gene-LDO09_RS12075;Dbxref=Genbank:WP_267461197.1;Name=WP_267461197.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024845.2;locus_tag=LDO09_RS12075;product=zf-TFIIB domain-containing protein;protein_id=WP_267461197.1;transl_table=11 NZ_AP024926.1 RefSeq gene 927253 927408 . + . ID=gene-LDO09_RS05030;Name=LDO09_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05030;old_locus_tag=TthAA11_09810 NZ_AP024926.1 GeneMarkS-2+ CDS 927253 927408 . + 0 ID=cds-WP_223969077.1;Parent=gene-LDO09_RS05030;Dbxref=Genbank:WP_223969077.1;Name=WP_223969077.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS05030;product=hypothetical protein;protein_id=WP_223969077.1;transl_table=11 NZ_AP024926.1 RefSeq gene 927461 927604 . - . ID=gene-LDO09_RS05035;Name=LDO09_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05035;old_locus_tag=TthAA11_09820 NZ_AP024926.1 GeneMarkS-2+ CDS 927461 927604 . - 0 ID=cds-WP_223969079.1;Parent=gene-LDO09_RS05035;Dbxref=Genbank:WP_223969079.1;Name=WP_223969079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS05035;product=hypothetical protein;protein_id=WP_223969079.1;transl_table=11 NZ_AP024926.1 RefSeq gene 927642 927968 . - . ID=gene-LDO09_RS05040;Name=LDO09_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05040;old_locus_tag=TthAA11_09830 NZ_AP024926.1 Protein Homology CDS 927642 927968 . - 0 ID=cds-WP_014629686.1;Parent=gene-LDO09_RS05040;Dbxref=Genbank:WP_014629686.1;Name=WP_014629686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172987.1;locus_tag=LDO09_RS05040;product=nucleoside triphosphate pyrophosphohydrolase family protein;protein_id=WP_014629686.1;transl_table=11 NZ_AP024926.1 RefSeq gene 927958 930984 . - . ID=gene-LDO09_RS05045;Name=LDO09_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05045;old_locus_tag=TthAA11_09840 NZ_AP024926.1 Protein Homology CDS 927958 930984 . - 0 ID=cds-WP_223969081.1;Parent=gene-LDO09_RS05045;Dbxref=Genbank:WP_223969081.1;Name=WP_223969081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172988.1;locus_tag=LDO09_RS05045;product=chromosome segregation SMC family protein;protein_id=WP_223969081.1;transl_table=11 NZ_AP024926.1 RefSeq gene 930981 931478 . - . ID=gene-LDO09_RS05050;Name=LDO09_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05050;old_locus_tag=TthAA11_09850 NZ_AP024926.1 Protein Homology CDS 930981 931478 . - 0 ID=cds-WP_014629684.1;Parent=gene-LDO09_RS05050;Dbxref=Genbank:WP_014629684.1;Name=WP_014629684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629684.1;locus_tag=LDO09_RS05050;product=GerMN domain-containing protein;protein_id=WP_014629684.1;transl_table=11 NZ_AP024926.1 RefSeq gene 931475 932629 . - . ID=gene-LDO09_RS05055;Name=LDO09_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05055;old_locus_tag=TthAA11_09860 NZ_AP024926.1 Protein Homology CDS 931475 932629 . - 0 ID=cds-WP_223969084.1;Parent=gene-LDO09_RS05055;Dbxref=Genbank:WP_223969084.1;Name=WP_223969084.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172990.1;locus_tag=LDO09_RS05055;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_223969084.1;transl_table=11 NZ_AP024926.1 RefSeq gene 932626 933060 . - . ID=gene-LDO09_RS05060;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LDO09_RS05060;old_locus_tag=TthAA11_09870 NZ_AP024926.1 Protein Homology CDS 932626 933060 . - 0 ID=cds-WP_223969086.1;Parent=gene-LDO09_RS05060;Dbxref=Genbank:WP_223969086.1;Name=WP_223969086.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510246.1;locus_tag=LDO09_RS05060;product=SsrA-binding protein SmpB;protein_id=WP_223969086.1;transl_table=11 NZ_AP024926.1 RefSeq gene 933062 933769 . - . ID=gene-LDO09_RS05065;Name=LDO09_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05065;old_locus_tag=TthAA11_09880 NZ_AP024926.1 Protein Homology CDS 933062 933769 . - 0 ID=cds-WP_143585387.1;Parent=gene-LDO09_RS05065;Dbxref=Genbank:WP_143585387.1;Name=WP_143585387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510247.1;locus_tag=LDO09_RS05065;product=carbon-nitrogen hydrolase family protein;protein_id=WP_143585387.1;transl_table=11 NZ_AP024926.1 RefSeq gene 933766 934371 . - . ID=gene-LDO09_RS05070;Name=LDO09_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05070;old_locus_tag=TthAA11_09890 NZ_AP024926.1 Protein Homology CDS 933766 934371 . - 0 ID=cds-WP_172619179.1;Parent=gene-LDO09_RS05070;Dbxref=Genbank:WP_172619179.1;Name=WP_172619179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630739.1;locus_tag=LDO09_RS05070;product=biotin transporter BioY;protein_id=WP_172619179.1;transl_table=11 NZ_AP024926.1 RefSeq gene 934483 935478 . + . ID=gene-LDO09_RS05075;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=LDO09_RS05075;old_locus_tag=TthAA11_09900 NZ_AP024926.1 Protein Homology CDS 934483 935478 . + 0 ID=cds-WP_014510249.1;Parent=gene-LDO09_RS05075;Dbxref=Genbank:WP_014510249.1;Name=WP_014510249.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630742.1;locus_tag=LDO09_RS05075;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_014510249.1;transl_table=11 NZ_AP024926.1 RefSeq gene 935479 936651 . + . ID=gene-LDO09_RS05080;Name=LDO09_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05080;old_locus_tag=TthAA11_09910 NZ_AP024926.1 Protein Homology CDS 935479 936651 . + 0 ID=cds-WP_143585391.1;Parent=gene-LDO09_RS05080;Dbxref=Genbank:WP_143585391.1;Name=WP_143585391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630743.1;locus_tag=LDO09_RS05080;product=phosphoglycerate kinase;protein_id=WP_143585391.1;transl_table=11 NZ_AP024926.1 RefSeq gene 936697 936984 . + . ID=gene-LDO09_RS05085;Name=LDO09_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05085;old_locus_tag=TthAA11_09920 NZ_AP024926.1 Protein Homology CDS 936697 936984 . + 0 ID=cds-WP_011172996.1;Parent=gene-LDO09_RS05085;Dbxref=Genbank:WP_011172996.1;Name=WP_011172996.1;Ontology_term=GO:0006364;gbkey=CDS;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172996.1;locus_tag=LDO09_RS05085;product=ribosome-binding factor A;protein_id=WP_011172996.1;transl_table=11 NZ_AP024926.1 RefSeq gene 936963 937361 . + . ID=gene-LDO09_RS05090;Name=LDO09_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05090;old_locus_tag=TthAA11_09930 NZ_AP024926.1 Protein Homology CDS 936963 937361 . + 0 ID=cds-WP_143590996.1;Parent=gene-LDO09_RS05090;Dbxref=Genbank:WP_143590996.1;Name=WP_143590996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228286.1;locus_tag=LDO09_RS05090;product=thioesterase family protein;protein_id=WP_143590996.1;transl_table=11 NZ_AP024926.1 RefSeq gene 937371 938615 . + . ID=gene-LDO09_RS05095;Name=LDO09_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05095;old_locus_tag=TthAA11_09940 NZ_AP024926.1 Protein Homology CDS 937371 938615 . + 0 ID=cds-WP_014629677.1;Parent=gene-LDO09_RS05095;Dbxref=Genbank:WP_014629677.1;Name=WP_014629677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228287.1;locus_tag=LDO09_RS05095;product=aspartate aminotransferase family protein;protein_id=WP_014629677.1;transl_table=11 NZ_AP024926.1 RefSeq gene 938617 940848 . + . ID=gene-LDO09_RS05100;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LDO09_RS05100;old_locus_tag=TthAA11_09950 NZ_AP024926.1 Protein Homology CDS 938617 940848 . + 0 ID=cds-WP_223969088.1;Parent=gene-LDO09_RS05100;Dbxref=Genbank:WP_223969088.1;Name=WP_223969088.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172999.1;locus_tag=LDO09_RS05100;product=ribonuclease R;protein_id=WP_223969088.1;transl_table=11 NZ_AP024926.1 RefSeq gene 940845 941957 . - . ID=gene-LDO09_RS05105;Name=amrB;gbkey=Gene;gene=amrB;gene_biotype=protein_coding;locus_tag=LDO09_RS05105;old_locus_tag=TthAA11_09960 NZ_AP024926.1 Protein Homology CDS 940845 941957 . - 0 ID=cds-WP_223969090.1;Parent=gene-LDO09_RS05105;Dbxref=Genbank:WP_223969090.1;Name=WP_223969090.1;gbkey=CDS;gene=amrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173000.1;locus_tag=LDO09_RS05105;product=AmmeMemoRadiSam system protein B;protein_id=WP_223969090.1;transl_table=11 NZ_AP024926.1 RefSeq gene 941911 943206 . - . ID=gene-LDO09_RS05110;Name=LDO09_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05110;old_locus_tag=TthAA11_09970 NZ_AP024926.1 Protein Homology CDS 941911 943206 . - 0 ID=cds-WP_223969092.1;Parent=gene-LDO09_RS05110;Dbxref=Genbank:WP_223969092.1;Name=WP_223969092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228300.1;locus_tag=LDO09_RS05110;product=HDIG domain-containing protein;protein_id=WP_223969092.1;transl_table=11 NZ_AP024926.1 RefSeq gene 943207 943818 . + . ID=gene-LDO09_RS05115;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LDO09_RS05115;old_locus_tag=TthAA11_09980 NZ_AP024926.1 Protein Homology CDS 943207 943818 . + 0 ID=cds-WP_223969094.1;Parent=gene-LDO09_RS05115;Dbxref=Genbank:WP_223969094.1;Name=WP_223969094.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173002.1;locus_tag=LDO09_RS05115;product=dephospho-CoA kinase;protein_id=WP_223969094.1;transl_table=11 NZ_AP024926.1 RefSeq gene 943787 944290 . - . ID=gene-LDO09_RS05120;Name=LDO09_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05120;old_locus_tag=TthAA11_09990 NZ_AP024926.1 Protein Homology CDS 943787 944290 . - 0 ID=cds-WP_223966648.1;Parent=gene-LDO09_RS05120;Dbxref=Genbank:WP_223966648.1;Name=WP_223966648.1;Ontology_term=GO:0008654,GO:0043772,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=acyl-phosphate glycerol-3-phosphate acyltransferase activity|0043772||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629672.1;locus_tag=LDO09_RS05120;product=glycerol-3-phosphate acyltransferase;protein_id=WP_223966648.1;transl_table=11 NZ_AP024926.1 RefSeq gene 944342 944418 . + . ID=gene-LDO09_RS05125;Name=LDO09_RS05125;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS05125;old_locus_tag=TthAA11_t00300 NZ_AP024926.1 tRNAscan-SE tRNA 944342 944418 . + . ID=rna-LDO09_RS05125;Parent=gene-LDO09_RS05125;anticodon=(pos:944376..944378);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS05125;product=tRNA-Pro NZ_AP024926.1 tRNAscan-SE exon 944342 944418 . + . ID=exon-LDO09_RS05125-1;Parent=rna-LDO09_RS05125;anticodon=(pos:944376..944378);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS05125;product=tRNA-Pro NZ_AP024926.1 RefSeq gene 944495 945010 . + . ID=gene-LDO09_RS05130;Name=LDO09_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05130;old_locus_tag=TthAA11_10000 NZ_AP024926.1 Protein Homology CDS 944495 945010 . + 0 ID=cds-WP_223966650.1;Parent=gene-LDO09_RS05130;Dbxref=Genbank:WP_223966650.1;Name=WP_223966650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015559.2;locus_tag=LDO09_RS05130;product=RsmD family RNA methyltransferase;protein_id=WP_223966650.1;transl_table=11 NZ_AP024926.1 RefSeq gene 945011 945493 . + . ID=gene-LDO09_RS05135;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LDO09_RS05135;old_locus_tag=TthAA11_10010 NZ_AP024926.1 Protein Homology CDS 945011 945493 . + 0 ID=cds-WP_014629670.1;Parent=gene-LDO09_RS05135;Dbxref=Genbank:WP_014629670.1;Name=WP_014629670.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173005.1;locus_tag=LDO09_RS05135;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_014629670.1;transl_table=11 NZ_AP024926.1 RefSeq gene 945504 946994 . + . ID=gene-LDO09_RS05140;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LDO09_RS05140;old_locus_tag=TthAA11_10020 NZ_AP024926.1 Protein Homology CDS 945504 946994 . + 0 ID=cds-WP_223969096.1;Parent=gene-LDO09_RS05140;Dbxref=Genbank:WP_223969096.1;Name=WP_223969096.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630766.1;locus_tag=LDO09_RS05140;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_223969096.1;transl_table=11 NZ_AP024926.1 RefSeq gene 947053 948354 . - . ID=gene-LDO09_RS05145;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LDO09_RS05145;old_locus_tag=TthAA11_10030 NZ_AP024926.1 Protein Homology CDS 947053 948354 . - 0 ID=cds-WP_223966653.1;Parent=gene-LDO09_RS05145;Dbxref=Genbank:WP_223966653.1;Name=WP_223966653.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173007.1;locus_tag=LDO09_RS05145;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_223966653.1;transl_table=11 NZ_AP024926.1 RefSeq gene 948338 949519 . - . ID=gene-LDO09_RS05150;Name=LDO09_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05150;old_locus_tag=TthAA11_10040 NZ_AP024926.1 Protein Homology CDS 948338 949519 . - 0 ID=cds-WP_223969098.1;Parent=gene-LDO09_RS05150;Dbxref=Genbank:WP_223969098.1;Name=WP_223969098.1;Ontology_term=GO:0006813,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173008.1;locus_tag=LDO09_RS05150;product=potassium/proton antiporter;protein_id=WP_223969098.1;transl_table=11 NZ_AP024926.1 RefSeq gene 949529 950803 . - . ID=gene-LDO09_RS05155;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=LDO09_RS05155;old_locus_tag=TthAA11_10050 NZ_AP024926.1 Protein Homology CDS 949529 950803 . - 0 ID=cds-WP_223969100.1;Parent=gene-LDO09_RS05155;Dbxref=Genbank:WP_223969100.1;Name=WP_223969100.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112310.1;locus_tag=LDO09_RS05155;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_223969100.1;transl_table=11 NZ_AP024926.1 RefSeq gene 950852 951169 . + . ID=gene-LDO09_RS05160;Name=LDO09_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05160;old_locus_tag=TthAA11_10060 NZ_AP024926.1 Protein Homology CDS 950852 951169 . + 0 ID=cds-WP_143585413.1;Parent=gene-LDO09_RS05160;Dbxref=Genbank:WP_143585413.1;Name=WP_143585413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228306.1;locus_tag=LDO09_RS05160;product=multidrug efflux SMR transporter;protein_id=WP_143585413.1;transl_table=11 NZ_AP024926.1 RefSeq gene 951166 951699 . - . ID=gene-LDO09_RS05165;Name=LDO09_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05165;old_locus_tag=TthAA11_10070 NZ_AP024926.1 Protein Homology CDS 951166 951699 . - 0 ID=cds-WP_223969102.1;Parent=gene-LDO09_RS05165;Dbxref=Genbank:WP_223969102.1;Name=WP_223969102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228308.1;locus_tag=LDO09_RS05165;product=Uma2 family endonuclease;protein_id=WP_223969102.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 951712 952693 . - . ID=gene-LDO09_RS05170;Name=LDO09_RS05170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS05170;old_locus_tag=TthAA11_10080;pseudo=true NZ_AP024926.1 Protein Homology CDS 951712 952693 . - 0 ID=cds-LDO09_RS05170;Parent=gene-LDO09_RS05170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000068166.1;locus_tag=LDO09_RS05170;product=alpha-ketoacid dehydrogenase subunit beta;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 952693 953733 . - . ID=gene-LDO09_RS05175;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=LDO09_RS05175;old_locus_tag=TthAA11_10100 NZ_AP024926.1 Protein Homology CDS 952693 953733 . - 0 ID=cds-WP_223969104.1;Parent=gene-LDO09_RS05175;Dbxref=Genbank:WP_223969104.1;Name=WP_223969104.1;Ontology_term=GO:0006086,GO:0004739,GO:0045250;gbkey=CDS;gene=pdhA;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510263.1;locus_tag=LDO09_RS05175;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_223969104.1;transl_table=11 NZ_AP024926.1 RefSeq gene 953702 954847 . - . ID=gene-LDO09_RS05180;Name=LDO09_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05180;old_locus_tag=TthAA11_10110 NZ_AP024926.1 Protein Homology CDS 953702 954847 . - 0 ID=cds-WP_223969106.1;Parent=gene-LDO09_RS05180;Dbxref=Genbank:WP_223969106.1;Name=WP_223969106.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228311.1;locus_tag=LDO09_RS05180;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_223969106.1;transl_table=11 NZ_AP024926.1 RefSeq gene 954868 955779 . - . ID=gene-LDO09_RS05185;Name=LDO09_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05185;old_locus_tag=TthAA11_10120 NZ_AP024926.1 Protein Homology CDS 954868 955779 . - 0 ID=cds-WP_223969108.1;Parent=gene-LDO09_RS05185;Dbxref=Genbank:WP_223969108.1;Name=WP_223969108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112305.1;locus_tag=LDO09_RS05185;product=ABC transporter ATP-binding protein;protein_id=WP_223969108.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 956095 957340 . + . ID=gene-LDO09_RS05190;Name=LDO09_RS05190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS05190;old_locus_tag=TthAA11_10140;pseudo=true NZ_AP024926.1 Protein Homology CDS 956095 957340 . + 0 ID=cds-LDO09_RS05190;Parent=gene-LDO09_RS05190;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1;locus_tag=LDO09_RS05190;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 957896 958737 . + . ID=gene-LDO09_RS05195;Name=LDO09_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05195 NZ_AP024926.1 Protein Homology CDS 957896 958250 . + 0 ID=cds-WP_223968384.1;Parent=gene-LDO09_RS05195;Dbxref=Genbank:WP_223968384.1;Name=WP_223968384.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336521.1;locus_tag=LDO09_RS05195;product=IS5 family transposase;protein_id=WP_223968384.1;transl_table=11 NZ_AP024926.1 Protein Homology CDS 958250 958737 . + 2 ID=cds-WP_223968384.1;Parent=gene-LDO09_RS05195;Dbxref=Genbank:WP_223968384.1;Name=WP_223968384.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336521.1;locus_tag=LDO09_RS05195;product=IS5 family transposase;protein_id=WP_223968384.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 959463 960925 . - . ID=gene-LDO09_RS05205;Name=LDO09_RS05205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS05205;old_locus_tag=TthAA11_10200;pseudo=true NZ_AP024926.1 Protein Homology CDS 959463 960925 . - 0 ID=cds-LDO09_RS05205;Parent=gene-LDO09_RS05205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510270.1;locus_tag=LDO09_RS05205;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 960904 961242 . + . ID=gene-LDO09_RS05210;Name=LDO09_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05210 NZ_AP024926.1 Protein Homology CDS 960904 961242 . + 0 ID=cds-WP_223966689.1;Parent=gene-LDO09_RS05210;Dbxref=Genbank:WP_223966689.1;Name=WP_223966689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013561.2;locus_tag=LDO09_RS05210;product=ribbon-helix-helix domain-containing protein;protein_id=WP_223966689.1;transl_table=11 NZ_AP024926.1 RefSeq gene 961226 961978 . - . ID=gene-LDO09_RS05215;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LDO09_RS05215;old_locus_tag=TthAA11_10220 NZ_AP024926.1 Protein Homology CDS 961226 961978 . - 0 ID=cds-WP_143585431.1;Parent=gene-LDO09_RS05215;Dbxref=Genbank:WP_143585431.1;Name=WP_143585431.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228317.1;locus_tag=LDO09_RS05215;product=triose-phosphate isomerase;protein_id=WP_143585431.1;transl_table=11 NZ_AP024926.1 RefSeq gene 961987 963024 . - . ID=gene-LDO09_RS05220;Name=LDO09_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05220;old_locus_tag=TthAA11_10230 NZ_AP024926.1 Protein Homology CDS 961987 963024 . - 0 ID=cds-WP_143585433.1;Parent=gene-LDO09_RS05220;Dbxref=Genbank:WP_143585433.1;Name=WP_143585433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173027.1;locus_tag=LDO09_RS05220;product=fatty acid desaturase;protein_id=WP_143585433.1;transl_table=11 NZ_AP024926.1 RefSeq gene 963104 963793 . - . ID=gene-LDO09_RS05225;Name=LDO09_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05225;old_locus_tag=TthAA11_10240 NZ_AP024926.1 Protein Homology CDS 963104 963793 . - 0 ID=cds-WP_143584079.1-7;Parent=gene-LDO09_RS05225;Dbxref=Genbank:WP_143584079.1;Name=WP_143584079.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS05225;product=IS5-like element ISTth7 family transposase;protein_id=WP_143584079.1;transl_table=11 NZ_AP024926.1 RefSeq gene 964136 964594 . - . ID=gene-LDO09_RS05230;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=LDO09_RS05230;old_locus_tag=TthAA11_10260 NZ_AP024926.1 Protein Homology CDS 964136 964594 . - 0 ID=cds-WP_011173028.1;Parent=gene-LDO09_RS05230;Dbxref=Genbank:WP_011173028.1;Name=WP_011173028.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510273.1;locus_tag=LDO09_RS05230;product=D-aminoacyl-tRNA deacylase;protein_id=WP_011173028.1;transl_table=11 NZ_AP024926.1 RefSeq gene 964598 965422 . - . ID=gene-LDO09_RS05235;Name=LDO09_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05235;old_locus_tag=TthAA11_10270 NZ_AP024926.1 Protein Homology CDS 964598 965422 . - 0 ID=cds-WP_143585437.1;Parent=gene-LDO09_RS05235;Dbxref=Genbank:WP_143585437.1;Name=WP_143585437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228319.1;locus_tag=LDO09_RS05235;product=DegV family protein;protein_id=WP_143585437.1;transl_table=11 NZ_AP024926.1 RefSeq gene 965424 966266 . - . ID=gene-LDO09_RS05240;Name=LDO09_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05240;old_locus_tag=TthAA11_10280 NZ_AP024926.1 Protein Homology CDS 965424 966266 . - 0 ID=cds-WP_143585439.1;Parent=gene-LDO09_RS05240;Dbxref=Genbank:WP_143585439.1;Name=WP_143585439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629651.1;locus_tag=LDO09_RS05240;product=DegV family protein;protein_id=WP_143585439.1;transl_table=11 NZ_AP024926.1 RefSeq gene 966353 967918 . + . ID=gene-LDO09_RS05245;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=LDO09_RS05245;old_locus_tag=TthAA11_10290 NZ_AP024926.1 Protein Homology CDS 966353 967918 . + 0 ID=cds-WP_143585441.1;Parent=gene-LDO09_RS05245;Dbxref=Genbank:WP_143585441.1;Name=WP_143585441.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329203.1;locus_tag=LDO09_RS05245;product=phosphoglycerate dehydrogenase;protein_id=WP_143585441.1;transl_table=11 NZ_AP024926.1 RefSeq gene 968038 968472 . + . ID=gene-LDO09_RS05250;Name=LDO09_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05250;old_locus_tag=TthAA11_10300 NZ_AP024926.1 Protein Homology CDS 968038 968472 . + 0 ID=cds-WP_011228322.1;Parent=gene-LDO09_RS05250;Dbxref=Genbank:WP_011228322.1;Name=WP_011228322.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173032.1;locus_tag=LDO09_RS05250;product=MarR family transcriptional regulator;protein_id=WP_011228322.1;transl_table=11 NZ_AP024926.1 RefSeq gene 968469 969653 . + . ID=gene-LDO09_RS05255;Name=LDO09_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05255;old_locus_tag=TthAA11_10310 NZ_AP024926.1 Protein Homology CDS 968469 969653 . + 0 ID=cds-WP_143585442.1;Parent=gene-LDO09_RS05255;Dbxref=Genbank:WP_143585442.1;Name=WP_143585442.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510275.1;locus_tag=LDO09_RS05255;product=FtsX-like permease family protein;protein_id=WP_143585442.1;transl_table=11 NZ_AP024926.1 RefSeq gene 969658 970350 . + . ID=gene-LDO09_RS05260;Name=LDO09_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05260;old_locus_tag=TthAA11_10320 NZ_AP024926.1 Protein Homology CDS 969658 970350 . + 0 ID=cds-WP_143585444.1;Parent=gene-LDO09_RS05260;Dbxref=Genbank:WP_143585444.1;Name=WP_143585444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510276.1;locus_tag=LDO09_RS05260;product=outer membrane lipoprotein-sorting protein;protein_id=WP_143585444.1;transl_table=11 NZ_AP024926.1 RefSeq gene 970351 971553 . + . ID=gene-LDO09_RS05265;Name=LDO09_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05265;old_locus_tag=TthAA11_10330 NZ_AP024926.1 Protein Homology CDS 970351 971553 . + 0 ID=cds-WP_143585446.1;Parent=gene-LDO09_RS05265;Dbxref=Genbank:WP_143585446.1;Name=WP_143585446.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329209.1;locus_tag=LDO09_RS05265;product=FtsX-like permease family protein;protein_id=WP_143585446.1;transl_table=11 NZ_AP024926.1 RefSeq gene 971564 972247 . + . ID=gene-LDO09_RS05270;Name=LDO09_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05270;old_locus_tag=TthAA11_10340 NZ_AP024926.1 Protein Homology CDS 971564 972247 . + 0 ID=cds-WP_143585448.1;Parent=gene-LDO09_RS05270;Dbxref=Genbank:WP_143585448.1;Name=WP_143585448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112273.1;locus_tag=LDO09_RS05270;product=ABC transporter ATP-binding protein;protein_id=WP_143585448.1;transl_table=11 NZ_AP024926.1 RefSeq gene 972251 973015 . + . ID=gene-LDO09_RS05275;Name=LDO09_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05275;old_locus_tag=TthAA11_10350 NZ_AP024926.1 Protein Homology CDS 972251 973015 . + 0 ID=cds-WP_143585450.1;Parent=gene-LDO09_RS05275;Dbxref=Genbank:WP_143585450.1;Name=WP_143585450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629644.1;locus_tag=LDO09_RS05275;product=hypothetical protein;protein_id=WP_143585450.1;transl_table=11 NZ_AP024926.1 RefSeq gene 973115 974290 . + . ID=gene-LDO09_RS05280;Name=mpgS;gbkey=Gene;gene=mpgS;gene_biotype=protein_coding;locus_tag=LDO09_RS05280;old_locus_tag=TthAA11_10360 NZ_AP024926.1 Protein Homology CDS 973115 974290 . + 0 ID=cds-WP_143585452.1;Parent=gene-LDO09_RS05280;Dbxref=Genbank:WP_143585452.1;Name=WP_143585452.1;Ontology_term=GO:0050504;gbkey=CDS;gene=mpgS;go_function=mannosyl-3-phosphoglycerate synthase activity|0050504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632340.1;locus_tag=LDO09_RS05280;product=mannosyl-3-phosphoglycerate synthase;protein_id=WP_143585452.1;transl_table=11 NZ_AP024926.1 RefSeq gene 974287 975066 . + . ID=gene-LDO09_RS05285;Name=mpgP;gbkey=Gene;gene=mpgP;gene_biotype=protein_coding;locus_tag=LDO09_RS05285;old_locus_tag=TthAA11_10370 NZ_AP024926.1 Protein Homology CDS 974287 975066 . + 0 ID=cds-WP_223969110.1;Parent=gene-LDO09_RS05285;Dbxref=Genbank:WP_223969110.1;Name=WP_223969110.1;Ontology_term=GO:0050531;gbkey=CDS;gene=mpgP;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173034.1;locus_tag=LDO09_RS05285;product=mannosyl-3-phosphoglycerate phosphatase;protein_id=WP_223969110.1;transl_table=11 NZ_AP024926.1 RefSeq gene 975038 976411 . - . ID=gene-LDO09_RS05290;Name=LDO09_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05290;old_locus_tag=TthAA11_10380 NZ_AP024926.1 Protein Homology CDS 975038 976411 . - 0 ID=cds-WP_172619183.1;Parent=gene-LDO09_RS05290;Dbxref=Genbank:WP_172619183.1;Name=WP_172619183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632342.1;locus_tag=LDO09_RS05290;product=helix-turn-helix domain-containing protein;protein_id=WP_172619183.1;transl_table=11 NZ_AP024926.1 RefSeq gene 976559 977458 . + . ID=gene-LDO09_RS05295;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=LDO09_RS05295;old_locus_tag=TthAA11_10390 NZ_AP024926.1 Protein Homology CDS 976559 977458 . + 0 ID=cds-WP_223969113.1;Parent=gene-LDO09_RS05295;Dbxref=Genbank:WP_223969113.1;Name=WP_223969113.1;gbkey=CDS;gene=hpaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510280.1;locus_tag=LDO09_RS05295;product=2%2C4-dihydroxyhept-2-ene-1%2C7-dioic acid aldolase;protein_id=WP_223969113.1;transl_table=11 NZ_AP024926.1 RefSeq gene 977455 978195 . + . ID=gene-LDO09_RS05300;Name=LDO09_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05300;old_locus_tag=TthAA11_10400 NZ_AP024926.1 Protein Homology CDS 977455 978195 . + 0 ID=cds-WP_143585460.1;Parent=gene-LDO09_RS05300;Dbxref=Genbank:WP_143585460.1;Name=WP_143585460.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510281.1;locus_tag=LDO09_RS05300;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_143585460.1;transl_table=11 NZ_AP024926.1 RefSeq gene 978192 979748 . + . ID=gene-LDO09_RS05305;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=LDO09_RS05305;old_locus_tag=TthAA11_10410 NZ_AP024926.1 Protein Homology CDS 978192 979748 . + 0 ID=cds-WP_143585462.1;Parent=gene-LDO09_RS05305;Dbxref=Genbank:WP_143585462.1;Name=WP_143585462.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510282.1;locus_tag=LDO09_RS05305;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_143585462.1;transl_table=11 NZ_AP024926.1 RefSeq gene 979752 981203 . + . ID=gene-LDO09_RS05310;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=LDO09_RS05310;old_locus_tag=TthAA11_10420 NZ_AP024926.1 Protein Homology CDS 979752 981203 . + 0 ID=cds-WP_143585464.1;Parent=gene-LDO09_RS05310;Dbxref=Genbank:WP_143585464.1;Name=WP_143585464.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228328.1;locus_tag=LDO09_RS05310;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_143585464.1;transl_table=11 NZ_AP024926.1 RefSeq gene 981200 981649 . + . ID=gene-LDO09_RS05315;Name=LDO09_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05315;old_locus_tag=TthAA11_10430 NZ_AP024926.1 Protein Homology CDS 981200 981649 . + 0 ID=cds-WP_143585466.1;Parent=gene-LDO09_RS05315;Dbxref=Genbank:WP_143585466.1;Name=WP_143585466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228329.1;locus_tag=LDO09_RS05315;product=flavin reductase family protein;protein_id=WP_143585466.1;transl_table=11 NZ_AP024926.1 RefSeq gene 981637 982596 . + . ID=gene-LDO09_RS05320;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=LDO09_RS05320;old_locus_tag=TthAA11_10440 NZ_AP024926.1 Protein Homology CDS 981637 982596 . + 0 ID=cds-WP_143585468.1;Parent=gene-LDO09_RS05320;Dbxref=Genbank:WP_143585468.1;Name=WP_143585468.1;Ontology_term=GO:0008687;gbkey=CDS;gene=hpaD;go_function=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228330.1;locus_tag=LDO09_RS05320;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_143585468.1;transl_table=11 NZ_AP024926.1 RefSeq gene 982694 983866 . + . ID=gene-LDO09_RS05325;Name=LDO09_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05325;old_locus_tag=TthAA11_10450 NZ_AP024926.1 Protein Homology CDS 982694 983866 . + 0 ID=cds-WP_143585470.1;Parent=gene-LDO09_RS05325;Dbxref=Genbank:WP_143585470.1;Name=WP_143585470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173042.1;locus_tag=LDO09_RS05325;product=ABC transporter substrate-binding protein;protein_id=WP_143585470.1;transl_table=11 NZ_AP024926.1 RefSeq gene 983870 984847 . + . ID=gene-LDO09_RS05330;Name=LDO09_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05330;old_locus_tag=TthAA11_10460 NZ_AP024926.1 Protein Homology CDS 983870 984847 . + 0 ID=cds-WP_014629633.1;Parent=gene-LDO09_RS05330;Dbxref=Genbank:WP_014629633.1;Name=WP_014629633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629633.1;locus_tag=LDO09_RS05330;product=branched-chain amino acid ABC transporter permease;protein_id=WP_014629633.1;transl_table=11 NZ_AP024926.1 RefSeq gene 984844 986601 . + . ID=gene-LDO09_RS05335;Name=LDO09_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05335;old_locus_tag=TthAA11_10470 NZ_AP024926.1 Protein Homology CDS 984844 986601 . + 0 ID=cds-WP_143585474.1;Parent=gene-LDO09_RS05335;Dbxref=Genbank:WP_143585474.1;Name=WP_143585474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173044.1;locus_tag=LDO09_RS05335;product=branched-chain amino acid ABC transporter ATP-binding protein/permease;protein_id=WP_143585474.1;transl_table=11 NZ_AP024926.1 RefSeq gene 986598 987329 . + . ID=gene-LDO09_RS05340;Name=LDO09_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05340;old_locus_tag=TthAA11_10480 NZ_AP024926.1 Protein Homology CDS 986598 987329 . + 0 ID=cds-WP_143585476.1;Parent=gene-LDO09_RS05340;Dbxref=Genbank:WP_143585476.1;Name=WP_143585476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629631.1;locus_tag=LDO09_RS05340;product=ABC transporter ATP-binding protein;protein_id=WP_143585476.1;transl_table=11 NZ_AP024926.1 RefSeq gene 987326 987736 . + . ID=gene-LDO09_RS05345;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=LDO09_RS05345;old_locus_tag=TthAA11_10490 NZ_AP024926.1 Protein Homology CDS 987326 987736 . + 0 ID=cds-WP_143585478.1;Parent=gene-LDO09_RS05345;Dbxref=Genbank:WP_143585478.1;Name=WP_143585478.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228333.1;locus_tag=LDO09_RS05345;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_143585478.1;transl_table=11 NZ_AP024926.1 RefSeq gene 987693 989027 . + . ID=gene-LDO09_RS05350;Name=LDO09_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05350;old_locus_tag=TthAA11_10500 NZ_AP024926.1 Protein Homology CDS 987693 989027 . + 0 ID=cds-WP_172619184.1;Parent=gene-LDO09_RS05350;Dbxref=Genbank:WP_172619184.1;Name=WP_172619184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632371.1;locus_tag=LDO09_RS05350;product=phenylacetate--CoA ligase;protein_id=WP_172619184.1;transl_table=11 NZ_AP024926.1 RefSeq gene 989030 989455 . + . ID=gene-LDO09_RS05355;Name=LDO09_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05355;old_locus_tag=TthAA11_10510 NZ_AP024926.1 Protein Homology CDS 989030 989455 . + 0 ID=cds-WP_124104542.1;Parent=gene-LDO09_RS05355;Dbxref=Genbank:WP_124104542.1;Name=WP_124104542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228335.1;locus_tag=LDO09_RS05355;product=thioesterase family protein;protein_id=WP_124104542.1;transl_table=11 NZ_AP024926.1 RefSeq gene 989499 991505 . - . ID=gene-LDO09_RS05360;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;locus_tag=LDO09_RS05360;old_locus_tag=TthAA11_10520 NZ_AP024926.1 Protein Homology CDS 989499 991505 . - 0 ID=cds-WP_143585482.1;Parent=gene-LDO09_RS05360;Dbxref=Genbank:WP_143585482.1;Name=WP_143585482.1;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629628.1;locus_tag=LDO09_RS05360;product=phenylacetic acid degradation bifunctional protein PaaZ;protein_id=WP_143585482.1;transl_table=11 NZ_AP024926.1 RefSeq gene 991520 991975 . - . ID=gene-LDO09_RS05365;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=protein_coding;locus_tag=LDO09_RS05365;old_locus_tag=TthAA11_10530 NZ_AP024926.1 Protein Homology CDS 991520 991975 . - 0 ID=cds-WP_172619185.1;Parent=gene-LDO09_RS05365;Dbxref=Genbank:WP_172619185.1;Name=WP_172619185.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaJ;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717115.1;locus_tag=LDO09_RS05365;product=phenylacetate-CoA oxygenase subunit PaaJ;protein_id=WP_172619185.1;transl_table=11 NZ_AP024926.1 RefSeq gene 991969 992715 . - . ID=gene-LDO09_RS05370;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=LDO09_RS05370;old_locus_tag=TthAA11_10540 NZ_AP024926.1 Protein Homology CDS 991969 992715 . - 0 ID=cds-WP_143585486.1;Parent=gene-LDO09_RS05370;Dbxref=Genbank:WP_143585486.1;Name=WP_143585486.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629626.1;locus_tag=LDO09_RS05370;product=phenylacetate-CoA oxygenase subunit PaaC;protein_id=WP_143585486.1;transl_table=11 NZ_AP024926.1 RefSeq gene 992708 993229 . - . ID=gene-LDO09_RS05375;Name=LDO09_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05375;old_locus_tag=TthAA11_10550 NZ_AP024926.1 Protein Homology CDS 992708 993229 . - 0 ID=cds-WP_143585488.1;Parent=gene-LDO09_RS05375;Dbxref=Genbank:WP_143585488.1;Name=WP_143585488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510308.1;locus_tag=LDO09_RS05375;product=phenylacetic acid degradation protein;protein_id=WP_143585488.1;transl_table=11 NZ_AP024926.1 RefSeq gene 993239 994210 . - . ID=gene-LDO09_RS05380;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=LDO09_RS05380;old_locus_tag=TthAA11_10560 NZ_AP024926.1 Protein Homology CDS 993239 994210 . - 0 ID=cds-WP_143585490.1;Parent=gene-LDO09_RS05380;Dbxref=Genbank:WP_143585490.1;Name=WP_143585490.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329234.1;locus_tag=LDO09_RS05380;product=1%2C2-phenylacetyl-CoA epoxidase subunit A;protein_id=WP_143585490.1;transl_table=11 NZ_AP024926.1 RefSeq gene 994197 994808 . - . ID=gene-LDO09_RS05385;Name=LDO09_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05385;old_locus_tag=TthAA11_10570 NZ_AP024926.1 Protein Homology CDS 994197 994808 . - 0 ID=cds-WP_143585492.1;Parent=gene-LDO09_RS05385;Dbxref=Genbank:WP_143585492.1;Name=WP_143585492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629623.1;locus_tag=LDO09_RS05385;product=TetR/AcrR family transcriptional regulator;protein_id=WP_143585492.1;transl_table=11 NZ_AP024926.1 RefSeq gene 994900 995841 . - . ID=gene-LDO09_RS05390;Name=LDO09_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05390;old_locus_tag=TthAA11_10580 NZ_AP024926.1 Protein Homology CDS 994900 995841 . - 0 ID=cds-WP_143585494.1;Parent=gene-LDO09_RS05390;Dbxref=Genbank:WP_143585494.1;Name=WP_143585494.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629622.1;locus_tag=LDO09_RS05390;product=tyrosine-type recombinase/integrase;protein_id=WP_143585494.1;transl_table=11 NZ_AP024926.1 RefSeq gene 995893 996939 . - . ID=gene-LDO09_RS05395;Name=LDO09_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05395;old_locus_tag=TthAA11_10590 NZ_AP024926.1 Protein Homology CDS 995893 996939 . - 0 ID=cds-WP_143585496.1;Parent=gene-LDO09_RS05395;Dbxref=Genbank:WP_143585496.1;Name=WP_143585496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629621.1;locus_tag=LDO09_RS05395;product=ABC transporter ATP-binding protein;protein_id=WP_143585496.1;transl_table=11 NZ_AP024926.1 RefSeq gene 996949 997746 . - . ID=gene-LDO09_RS05400;Name=LDO09_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05400;old_locus_tag=TthAA11_10600 NZ_AP024926.1 Protein Homology CDS 996949 997746 . - 0 ID=cds-WP_223965479.1;Parent=gene-LDO09_RS05400;Dbxref=Genbank:WP_223965479.1;Name=WP_223965479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629620.1;locus_tag=LDO09_RS05400;product=carbohydrate ABC transporter permease;protein_id=WP_223965479.1;transl_table=11 NZ_AP024926.1 RefSeq gene 997743 998588 . - . ID=gene-LDO09_RS05405;Name=LDO09_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05405;old_locus_tag=TthAA11_10610 NZ_AP024926.1 Protein Homology CDS 997743 998588 . - 0 ID=cds-WP_011173058.1;Parent=gene-LDO09_RS05405;Dbxref=Genbank:WP_011173058.1;Name=WP_011173058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173058.1;locus_tag=LDO09_RS05405;product=sugar ABC transporter permease;protein_id=WP_011173058.1;transl_table=11 NZ_AP024926.1 RefSeq gene 998585 999832 . - . ID=gene-LDO09_RS05410;Name=LDO09_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05410;old_locus_tag=TthAA11_10620 NZ_AP024926.1 Protein Homology CDS 998585 999832 . - 0 ID=cds-WP_223965480.1;Parent=gene-LDO09_RS05410;Dbxref=Genbank:WP_223965480.1;Name=WP_223965480.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629618.1;locus_tag=LDO09_RS05410;product=trehalase family glycosidase;protein_id=WP_223965480.1;transl_table=11 NZ_AP024926.1 RefSeq gene 999860 1001125 . - . ID=gene-LDO09_RS05415;Name=LDO09_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05415;old_locus_tag=TthAA11_10630 NZ_AP024926.1 Protein Homology CDS 999860 1001125 . - 0 ID=cds-WP_223968354.1;Parent=gene-LDO09_RS05415;Dbxref=Genbank:WP_223968354.1;Name=WP_223968354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510315.1;locus_tag=LDO09_RS05415;product=ABC transporter substrate-binding protein;protein_id=WP_223968354.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1001256 1002347 . - . ID=gene-LDO09_RS05420;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=LDO09_RS05420;old_locus_tag=TthAA11_10640 NZ_AP024926.1 Protein Homology CDS 1001256 1002347 . - 0 ID=cds-WP_011228346.1;Parent=gene-LDO09_RS05420;Dbxref=Genbank:WP_011228346.1;Name=WP_011228346.1;Ontology_term=GO:0006094,GO:0004332,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173061.1;locus_tag=LDO09_RS05420;product=fructose-1%2C6-bisphosphate aldolase/phosphatase;protein_id=WP_011228346.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1002458 1002781 . + . ID=gene-LDO09_RS05425;Name=LDO09_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05425;old_locus_tag=TthAA11_10650 NZ_AP024926.1 Protein Homology CDS 1002458 1002781 . + 0 ID=cds-WP_008632387.1;Parent=gene-LDO09_RS05425;Dbxref=Genbank:WP_008632387.1;Name=WP_008632387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632387.1;locus_tag=LDO09_RS05425;product=helix-turn-helix domain-containing protein;protein_id=WP_008632387.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1002783 1003262 . - . ID=gene-LDO09_RS05430;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=LDO09_RS05430;old_locus_tag=TthAA11_10660 NZ_AP024926.1 Protein Homology CDS 1002783 1003262 . - 0 ID=cds-WP_143585502.1;Parent=gene-LDO09_RS05430;Dbxref=Genbank:WP_143585502.1;Name=WP_143585502.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329257.1;locus_tag=LDO09_RS05430;product=bacterioferritin;protein_id=WP_143585502.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1003276 1004757 . - . ID=gene-LDO09_RS05435;Name=LDO09_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05435;old_locus_tag=TthAA11_10670 NZ_AP024926.1 Protein Homology CDS 1003276 1004757 . - 0 ID=cds-WP_223968356.1;Parent=gene-LDO09_RS05435;Dbxref=Genbank:WP_223968356.1;Name=WP_223968356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228348.1;locus_tag=LDO09_RS05435;product=FAD-binding protein;protein_id=WP_223968356.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1004757 1005689 . - . ID=gene-LDO09_RS05440;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=LDO09_RS05440;old_locus_tag=TthAA11_10680 NZ_AP024926.1 Protein Homology CDS 1004757 1005689 . - 0 ID=cds-WP_207776559.1;Parent=gene-LDO09_RS05440;Dbxref=Genbank:WP_207776559.1;Name=WP_207776559.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510319.1;locus_tag=LDO09_RS05440;product=quinolinate synthase NadA;protein_id=WP_207776559.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1005770 1006630 . - . ID=gene-LDO09_RS05445;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=LDO09_RS05445;old_locus_tag=TthAA11_10690 NZ_AP024926.1 Protein Homology CDS 1005770 1006630 . - 0 ID=cds-WP_008632389.1;Parent=gene-LDO09_RS05445;Dbxref=Genbank:WP_008632389.1;Name=WP_008632389.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228350.1;locus_tag=LDO09_RS05445;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_008632389.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1006681 1008609 . + . ID=gene-LDO09_RS05450;Name=LDO09_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05450;old_locus_tag=TthAA11_10700 NZ_AP024926.1 Protein Homology CDS 1006681 1008609 . + 0 ID=cds-WP_223968358.1;Parent=gene-LDO09_RS05450;Dbxref=Genbank:WP_223968358.1;Name=WP_223968358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632390.1;locus_tag=LDO09_RS05450;product=thioredoxin domain-containing protein;protein_id=WP_223968358.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1008720 1009925 . + . ID=gene-LDO09_RS05455;Name=LDO09_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05455;old_locus_tag=TthAA11_10710 NZ_AP024926.1 Protein Homology CDS 1008720 1009925 . + 0 ID=cds-WP_223968360.1;Parent=gene-LDO09_RS05455;Dbxref=Genbank:WP_223968360.1;Name=WP_223968360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228352.1;locus_tag=LDO09_RS05455;product=thiolase family protein;protein_id=WP_223968360.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1009995 1011479 . - . ID=gene-LDO09_RS05460;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=LDO09_RS05460;old_locus_tag=TthAA11_10720 NZ_AP024926.1 Protein Homology CDS 1009995 1011479 . - 0 ID=cds-WP_223965485.1;Parent=gene-LDO09_RS05460;Dbxref=Genbank:WP_223965485.1;Name=WP_223965485.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173069.1;locus_tag=LDO09_RS05460;product=5-oxoprolinase subunit PxpB;protein_id=WP_223965485.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1011484 1013352 . - . ID=gene-LDO09_RS05465;Name=LDO09_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05465;old_locus_tag=TthAA11_10730 NZ_AP024926.1 Protein Homology CDS 1011484 1013352 . - 0 ID=cds-WP_223968362.1;Parent=gene-LDO09_RS05465;Dbxref=Genbank:WP_223968362.1;Name=WP_223968362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632394.1;locus_tag=LDO09_RS05465;product=MDR family MFS transporter;protein_id=WP_223968362.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1013349 1013756 . - . ID=gene-LDO09_RS05470;Name=LDO09_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05470;old_locus_tag=TthAA11_10740 NZ_AP024926.1 Protein Homology CDS 1013349 1013756 . - 0 ID=cds-WP_041443417.1;Parent=gene-LDO09_RS05470;Dbxref=Genbank:WP_041443417.1;Name=WP_041443417.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629606.1;locus_tag=LDO09_RS05470;product=MarR family transcriptional regulator;protein_id=WP_041443417.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1013853 1016084 . + . ID=gene-LDO09_RS05475;Name=LDO09_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05475;old_locus_tag=TthAA11_10750 NZ_AP024926.1 Protein Homology CDS 1013853 1016084 . + 0 ID=cds-WP_223965487.1;Parent=gene-LDO09_RS05475;Dbxref=Genbank:WP_223965487.1;Name=WP_223965487.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629605.1;locus_tag=LDO09_RS05475;product=diguanylate cyclase;protein_id=WP_223965487.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1016172 1016417 . + . ID=gene-LDO09_RS05480;Name=LDO09_RS05480;end_range=1016417,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS05480;partial=true;pseudo=true NZ_AP024926.1 Protein Homology CDS 1016172 1016417 . + 0 ID=cds-LDO09_RS05480;Parent=gene-LDO09_RS05480;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1016417,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024583.2;locus_tag=LDO09_RS05480;partial=true;product=GAF domain-containing protein;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1016669 1016731 . + . ID=gene-LDO09_RS12080;Name=LDO09_RS12080;end_range=1016731,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS12080;partial=true;pseudo=true NZ_AP024926.1 Protein Homology CDS 1016669 1016731 . + 0 ID=cds-LDO09_RS12080;Parent=gene-LDO09_RS12080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1016731,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=LDO09_RS12080;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1016964 1017212 . + . ID=gene-LDO09_RS05490;Name=LDO09_RS05490;end_range=1017212,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS05490;partial=true;pseudo=true NZ_AP024926.1 Protein Homology CDS 1016964 1017212 . + 0 ID=cds-LDO09_RS05490;Parent=gene-LDO09_RS05490;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1017212,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=LDO09_RS05490;partial=true;product=PAS domain-containing protein;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 1017412 1019613 . + . ID=gene-LDO09_RS05495;Name=LDO09_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05495;old_locus_tag=TthAA11_10770 NZ_AP024926.1 Protein Homology CDS 1017412 1019613 . + 0 ID=cds-WP_267461198.1;Parent=gene-LDO09_RS05495;Dbxref=Genbank:WP_267461198.1;Name=WP_267461198.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024583.2;locus_tag=LDO09_RS05495;product=PAS domain S-box protein;protein_id=WP_267461198.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1019610 1020533 . - . ID=gene-LDO09_RS05500;Name=LDO09_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05500;old_locus_tag=TthAA11_10780 NZ_AP024926.1 Protein Homology CDS 1019610 1020533 . - 0 ID=cds-WP_143585520.1;Parent=gene-LDO09_RS05500;Dbxref=Genbank:WP_143585520.1;Name=WP_143585520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629603.1;locus_tag=LDO09_RS05500;product=carbohydrate kinase;protein_id=WP_143585520.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1020739 1021332 . + . ID=gene-LDO09_RS05505;Name=LDO09_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05505;old_locus_tag=TthAA11_10790 NZ_AP024926.1 Protein Homology CDS 1020739 1021332 . + 0 ID=cds-WP_143586946.1;Parent=gene-LDO09_RS05505;Dbxref=Genbank:WP_143586946.1;Name=WP_143586946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173077.1;locus_tag=LDO09_RS05505;product=DUF4388 domain-containing protein;protein_id=WP_143586946.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1021329 1022297 . + . ID=gene-LDO09_RS05510;Name=LDO09_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05510;old_locus_tag=TthAA11_10800 NZ_AP024926.1 Protein Homology CDS 1021329 1022297 . + 0 ID=cds-WP_143585522.1;Parent=gene-LDO09_RS05510;Dbxref=Genbank:WP_143585522.1;Name=WP_143585522.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228360.1;locus_tag=LDO09_RS05510;product=response regulator;protein_id=WP_143585522.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1022265 1023692 . - . ID=gene-LDO09_RS05515;Name=LDO09_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05515;old_locus_tag=TthAA11_10810 NZ_AP024926.1 Protein Homology CDS 1022265 1023692 . - 0 ID=cds-WP_143585524.1;Parent=gene-LDO09_RS05515;Dbxref=Genbank:WP_143585524.1;Name=WP_143585524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173079.1;locus_tag=LDO09_RS05515;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_143585524.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1023740 1024237 . - . ID=gene-LDO09_RS05520;Name=LDO09_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05520;old_locus_tag=TthAA11_10820 NZ_AP024926.1 Protein Homology CDS 1023740 1024237 . - 0 ID=cds-WP_143585526.1;Parent=gene-LDO09_RS05520;Dbxref=Genbank:WP_143585526.1;Name=WP_143585526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173080.1;locus_tag=LDO09_RS05520;product=histidine phosphatase family protein;protein_id=WP_143585526.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1024244 1025773 . - . ID=gene-LDO09_RS05525;Name=LDO09_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05525;old_locus_tag=TthAA11_10830 NZ_AP024926.1 Protein Homology CDS 1024244 1025773 . - 0 ID=cds-WP_143585528.1;Parent=gene-LDO09_RS05525;Dbxref=Genbank:WP_143585528.1;Name=WP_143585528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173081.1;locus_tag=LDO09_RS05525;product=Ppx/GppA phosphatase family protein;protein_id=WP_143585528.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1025768 1027594 . + . ID=gene-LDO09_RS05530;Name=LDO09_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05530;old_locus_tag=TthAA11_10840 NZ_AP024926.1 Protein Homology CDS 1025768 1027594 . + 0 ID=cds-WP_223968364.1;Parent=gene-LDO09_RS05530;Dbxref=Genbank:WP_223968364.1;Name=WP_223968364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173082.1;locus_tag=LDO09_RS05530;product=phospholipase D-like domain-containing protein;protein_id=WP_223968364.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1027589 1030162 . - . ID=gene-LDO09_RS05535;Name=LDO09_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05535;old_locus_tag=TthAA11_10850 NZ_AP024926.1 Protein Homology CDS 1027589 1030162 . - 0 ID=cds-WP_223968372.1;Parent=gene-LDO09_RS05535;Dbxref=Genbank:WP_223968372.1;Name=WP_223968372.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173083.1;locus_tag=LDO09_RS05535;product=UvrD-helicase domain-containing protein;protein_id=WP_223968372.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1030159 1032369 . - . ID=gene-LDO09_RS05540;Name=LDO09_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05540;old_locus_tag=TthAA11_10860 NZ_AP024926.1 Protein Homology CDS 1030159 1032369 . - 0 ID=cds-WP_223968380.1;Parent=gene-LDO09_RS05540;Dbxref=Genbank:WP_223968380.1;Name=WP_223968380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228364.1;locus_tag=LDO09_RS05540;product=hypothetical protein;protein_id=WP_223968380.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1032416 1032769 . - . ID=gene-LDO09_RS05545;Name=LDO09_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05545;old_locus_tag=TthAA11_10870 NZ_AP024926.1 Protein Homology CDS 1032416 1032769 . - 0 ID=cds-WP_223968382.1;Parent=gene-LDO09_RS05545;Dbxref=Genbank:WP_223968382.1;Name=WP_223968382.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027675.2;locus_tag=LDO09_RS05545;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_223968382.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1032968 1033567 . + . ID=gene-LDO09_RS05550;Name=LDO09_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05550;old_locus_tag=TthAA11_10880 NZ_AP024926.1 Protein Homology CDS 1032968 1033567 . + 0 ID=cds-WP_143585538.1;Parent=gene-LDO09_RS05550;Dbxref=Genbank:WP_143585538.1;Name=WP_143585538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629590.1;locus_tag=LDO09_RS05550;product=TetR/AcrR family transcriptional regulator;protein_id=WP_143585538.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1033539 1034396 . + . ID=gene-LDO09_RS05555;Name=LDO09_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05555;old_locus_tag=TthAA11_10890 NZ_AP024926.1 Protein Homology CDS 1033539 1034396 . + 0 ID=cds-WP_165738622.1;Parent=gene-LDO09_RS05555;Dbxref=Genbank:WP_165738622.1;Name=WP_165738622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629589.1;locus_tag=LDO09_RS05555;product=ABC transporter ATP-binding protein;protein_id=WP_165738622.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1034393 1034557 . + . ID=gene-LDO09_RS05560;Name=LDO09_RS05560;end_range=1034557,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS05560;old_locus_tag=TthAA11_10900;partial=true;pseudo=true NZ_AP024926.1 Protein Homology CDS 1034393 1034557 . + 0 ID=cds-LDO09_RS05560;Parent=gene-LDO09_RS05560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1034557,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110806.1;locus_tag=LDO09_RS05560;partial=true;product=ABC transporter permease;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 1034565 1035089 . - . ID=gene-LDO09_RS12085;Name=LDO09_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12085;old_locus_tag=TthAA11_10910 NZ_AP024926.1 Protein Homology CDS 1034565 1035089 . - 0 ID=cds-WP_014509880.1-2;Parent=gene-LDO09_RS12085;Dbxref=Genbank:WP_014509880.1;Name=WP_014509880.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=LDO09_RS12085;product=IS630 family transposase;protein_id=WP_014509880.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1035086 1035607 . - . ID=gene-LDO09_RS12090;Name=LDO09_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12090;old_locus_tag=TthAA11_10920 NZ_AP024926.1 Protein Homology CDS 1035086 1035607 . - 0 ID=cds-WP_223965695.1;Parent=gene-LDO09_RS12090;Dbxref=Genbank:WP_223965695.1;Name=WP_223965695.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=LDO09_RS12090;product=IS630 family transposase;protein_id=WP_223965695.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1035671 1036512 . + . ID=gene-LDO09_RS05570;Name=LDO09_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05570 NZ_AP024926.1 Protein Homology CDS 1035671 1036025 . + 0 ID=cds-WP_223968384.1-2;Parent=gene-LDO09_RS05570;Dbxref=Genbank:WP_223968384.1;Name=WP_223968384.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336521.1;locus_tag=LDO09_RS05570;product=IS5 family transposase;protein_id=WP_223968384.1;transl_table=11 NZ_AP024926.1 Protein Homology CDS 1036025 1036512 . + 2 ID=cds-WP_223968384.1-2;Parent=gene-LDO09_RS05570;Dbxref=Genbank:WP_223968384.1;Name=WP_223968384.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336521.1;locus_tag=LDO09_RS05570;product=IS5 family transposase;protein_id=WP_223968384.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1036519 1037505 . + . ID=gene-LDO09_RS05575;Name=LDO09_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05575;old_locus_tag=TthAA11_10950 NZ_AP024926.1 Protein Homology CDS 1036519 1037505 . + 0 ID=cds-WP_223968386.1;Parent=gene-LDO09_RS05575;Dbxref=Genbank:WP_223968386.1;Name=WP_223968386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018460884.1;locus_tag=LDO09_RS05575;product=ABC transporter permease;protein_id=WP_223968386.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1037502 1038296 . + . ID=gene-LDO09_RS05580;Name=LDO09_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05580;old_locus_tag=TthAA11_10960 NZ_AP024926.1 Protein Homology CDS 1037502 1038296 . + 0 ID=cds-WP_143585544.1;Parent=gene-LDO09_RS05580;Dbxref=Genbank:WP_143585544.1;Name=WP_143585544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228373.1;locus_tag=LDO09_RS05580;product=hypothetical protein;protein_id=WP_143585544.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1038293 1038937 . + . ID=gene-LDO09_RS05585;Name=LDO09_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05585;old_locus_tag=TthAA11_10970 NZ_AP024926.1 Protein Homology CDS 1038293 1038937 . + 0 ID=cds-WP_143585546.1;Parent=gene-LDO09_RS05585;Dbxref=Genbank:WP_143585546.1;Name=WP_143585546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228374.1;locus_tag=LDO09_RS05585;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_143585546.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1039281 1040087 . + . ID=gene-LDO09_RS05590;Name=LDO09_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05590;old_locus_tag=TthAA11_10980 NZ_AP024926.1 Protein Homology CDS 1039281 1040087 . + 0 ID=cds-WP_223968388.1;Parent=gene-LDO09_RS05590;Dbxref=Genbank:WP_223968388.1;Name=WP_223968388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716583.1;locus_tag=LDO09_RS05590;product=hypothetical protein;protein_id=WP_223968388.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1040198 1040386 . + . ID=gene-LDO09_RS05595;Name=LDO09_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05595;old_locus_tag=TthAA11_10990 NZ_AP024926.1 Protein Homology CDS 1040198 1040386 . + 0 ID=cds-WP_223968390.1;Parent=gene-LDO09_RS05595;Dbxref=Genbank:WP_223968390.1;Name=WP_223968390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630225.1;locus_tag=LDO09_RS05595;product=hypothetical protein;protein_id=WP_223968390.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1040553 1042769 . + . ID=gene-LDO09_RS12095;Name=LDO09_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12095;old_locus_tag=TthAA11_11010 NZ_AP024926.1 Protein Homology CDS 1040553 1042769 . + 0 ID=cds-WP_267461182.1;Parent=gene-LDO09_RS12095;Dbxref=Genbank:WP_267461182.1;Name=WP_267461182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716581.1;locus_tag=LDO09_RS12095;product=DUF3987 domain-containing protein;protein_id=WP_267461182.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1043095 1044807 . + . ID=gene-LDO09_RS05605;Name=LDO09_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05605;old_locus_tag=TthAA11_11020 NZ_AP024926.1 Protein Homology CDS 1043095 1044807 . + 0 ID=cds-WP_223968392.1;Parent=gene-LDO09_RS05605;Dbxref=Genbank:WP_223968392.1;Name=WP_223968392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716580.1;locus_tag=LDO09_RS05605;product=bifunctional 3'-5' exonuclease/DNA polymerase;protein_id=WP_223968392.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1044804 1045094 . + . ID=gene-LDO09_RS05610;Name=LDO09_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05610;old_locus_tag=TthAA11_11030 NZ_AP024926.1 GeneMarkS-2+ CDS 1044804 1045094 . + 0 ID=cds-WP_223968394.1;Parent=gene-LDO09_RS05610;Dbxref=Genbank:WP_223968394.1;Name=WP_223968394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS05610;product=hypothetical protein;protein_id=WP_223968394.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1045108 1045305 . + . ID=gene-LDO09_RS05615;Name=LDO09_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05615;old_locus_tag=TthAA11_11040 NZ_AP024926.1 GeneMarkS-2+ CDS 1045108 1045305 . + 0 ID=cds-WP_143585554.1;Parent=gene-LDO09_RS05615;Dbxref=Genbank:WP_143585554.1;Name=WP_143585554.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS05615;product=hypothetical protein;protein_id=WP_143585554.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1045302 1045685 . + . ID=gene-LDO09_RS05620;Name=LDO09_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05620;old_locus_tag=TthAA11_11050 NZ_AP024926.1 Protein Homology CDS 1045302 1045685 . + 0 ID=cds-WP_223965505.1;Parent=gene-LDO09_RS05620;Dbxref=Genbank:WP_223965505.1;Name=WP_223965505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013015020.1;locus_tag=LDO09_RS05620;product=hypothetical protein;protein_id=WP_223965505.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1046347 1046526 . + . ID=gene-LDO09_RS05625;Name=LDO09_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05625;old_locus_tag=TthAA11_11060 NZ_AP024926.1 Protein Homology CDS 1046347 1046526 . + 0 ID=cds-WP_011228387.1;Parent=gene-LDO09_RS05625;Dbxref=Genbank:WP_011228387.1;Name=WP_011228387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228387.1;locus_tag=LDO09_RS05625;product=helix-turn-helix domain-containing protein;protein_id=WP_011228387.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1046516 1046647 . + . ID=gene-LDO09_RS12100;Name=LDO09_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12100 NZ_AP024926.1 GeneMarkS-2+ CDS 1046516 1046647 . + 0 ID=cds-WP_256464034.1;Parent=gene-LDO09_RS12100;Dbxref=Genbank:WP_256464034.1;Name=WP_256464034.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS12100;product=hypothetical protein;protein_id=WP_256464034.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1046647 1047822 . + . ID=gene-LDO09_RS05630;Name=LDO09_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05630;old_locus_tag=TthAA11_11070 NZ_AP024926.1 Protein Homology CDS 1046647 1047822 . + 0 ID=cds-WP_143585558.1;Parent=gene-LDO09_RS05630;Dbxref=Genbank:WP_143585558.1;Name=WP_143585558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510345.1;locus_tag=LDO09_RS05630;product=site-specific integrase;protein_id=WP_143585558.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1047900 1047974 . - . ID=gene-LDO09_RS05635;Name=LDO09_RS05635;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS05635;old_locus_tag=TthAA11_t00320 NZ_AP024926.1 tRNAscan-SE tRNA 1047900 1047974 . - . ID=rna-LDO09_RS05635;Parent=gene-LDO09_RS05635;anticodon=(pos:complement(1047940..1047942));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS05635;product=tRNA-Val NZ_AP024926.1 tRNAscan-SE exon 1047900 1047974 . - . ID=exon-LDO09_RS05635-1;Parent=rna-LDO09_RS05635;anticodon=(pos:complement(1047940..1047942));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS05635;product=tRNA-Val NZ_AP024926.1 RefSeq gene 1048356 1049045 . + . ID=gene-LDO09_RS05640;Name=LDO09_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05640;old_locus_tag=TthAA11_11090 NZ_AP024926.1 Protein Homology CDS 1048356 1049045 . + 0 ID=cds-WP_223968396.1;Parent=gene-LDO09_RS05640;Dbxref=Genbank:WP_223968396.1;Name=WP_223968396.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS05640;product=IS5-like element ISTth7 family transposase;protein_id=WP_223968396.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1049154 1050011 . + . ID=gene-LDO09_RS05645;Name=LDO09_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05645;old_locus_tag=TthAA11_11100 NZ_AP024926.1 Protein Homology CDS 1049154 1050011 . + 0 ID=cds-WP_008632430.1;Parent=gene-LDO09_RS05645;Dbxref=Genbank:WP_008632430.1;Name=WP_008632430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632430.1;locus_tag=LDO09_RS05645;product=sulfurtransferase;protein_id=WP_008632430.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1050014 1050868 . - . ID=gene-LDO09_RS05650;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=LDO09_RS05650;old_locus_tag=TthAA11_11110 NZ_AP024926.1 Protein Homology CDS 1050014 1050868 . - 0 ID=cds-WP_143585561.1;Parent=gene-LDO09_RS05650;Dbxref=Genbank:WP_143585561.1;Name=WP_143585561.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629585.1;locus_tag=LDO09_RS05650;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_143585561.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1050903 1051481 . + . ID=gene-LDO09_RS05655;Name=LDO09_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05655;old_locus_tag=TthAA11_11120 NZ_AP024926.1 Protein Homology CDS 1050903 1051481 . + 0 ID=cds-WP_223968398.1;Parent=gene-LDO09_RS05655;Dbxref=Genbank:WP_223968398.1;Name=WP_223968398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632433.1;locus_tag=LDO09_RS05655;product=response regulator transcription factor;protein_id=WP_223968398.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1051526 1051966 . - . ID=gene-LDO09_RS05660;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LDO09_RS05660;old_locus_tag=TthAA11_11130 NZ_AP024926.1 Protein Homology CDS 1051526 1051966 . - 0 ID=cds-WP_143585565.1;Parent=gene-LDO09_RS05660;Dbxref=Genbank:WP_143585565.1;Name=WP_143585565.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228391.1;locus_tag=LDO09_RS05660;product=50S ribosomal protein L19;protein_id=WP_143585565.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1052023 1052742 . - . ID=gene-LDO09_RS05665;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LDO09_RS05665;old_locus_tag=TthAA11_11140 NZ_AP024926.1 Protein Homology CDS 1052023 1052742 . - 0 ID=cds-WP_011173113.1;Parent=gene-LDO09_RS05665;Dbxref=Genbank:WP_011173113.1;Name=WP_011173113.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632436.1;locus_tag=LDO09_RS05665;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_011173113.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1052742 1053230 . - . ID=gene-LDO09_RS05670;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LDO09_RS05670;old_locus_tag=TthAA11_11150 NZ_AP024926.1 Protein Homology CDS 1052742 1053230 . - 0 ID=cds-WP_008632437.1;Parent=gene-LDO09_RS05670;Dbxref=Genbank:WP_008632437.1;Name=WP_008632437.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228392.1;locus_tag=LDO09_RS05670;product=ribosome maturation factor RimM;protein_id=WP_008632437.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1053264 1053482 . - . ID=gene-LDO09_RS05675;Name=LDO09_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05675;old_locus_tag=TthAA11_11160 NZ_AP024926.1 Protein Homology CDS 1053264 1053482 . - 0 ID=cds-WP_011173114.1;Parent=gene-LDO09_RS05675;Dbxref=Genbank:WP_011173114.1;Name=WP_011173114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173114.1;locus_tag=LDO09_RS05675;product=KH domain-containing protein;protein_id=WP_011173114.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1053541 1053807 . - . ID=gene-LDO09_RS05680;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LDO09_RS05680;old_locus_tag=TthAA11_11170 NZ_AP024926.1 Protein Homology CDS 1053541 1053807 . - 0 ID=cds-WP_011173115.1;Parent=gene-LDO09_RS05680;Dbxref=Genbank:WP_011173115.1;Name=WP_011173115.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173115.1;locus_tag=LDO09_RS05680;product=30S ribosomal protein S16;protein_id=WP_011173115.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1053812 1055116 . - . ID=gene-LDO09_RS05685;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LDO09_RS05685;old_locus_tag=TthAA11_11180 NZ_AP024926.1 Protein Homology CDS 1053812 1055116 . - 0 ID=cds-WP_011173116.1;Parent=gene-LDO09_RS05685;Dbxref=Genbank:WP_011173116.1;Name=WP_011173116.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629581.1;locus_tag=LDO09_RS05685;product=signal recognition particle protein;protein_id=WP_011173116.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1055214 1055687 . - . ID=gene-LDO09_RS05690;Name=LDO09_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05690;old_locus_tag=TthAA11_11190 NZ_AP024926.1 Protein Homology CDS 1055214 1055687 . - 0 ID=cds-WP_011173117.1;Parent=gene-LDO09_RS05690;Dbxref=Genbank:WP_011173117.1;Name=WP_011173117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510346.1;locus_tag=LDO09_RS05690;product=PaaI family thioesterase;protein_id=WP_011173117.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1055684 1056112 . - . ID=gene-LDO09_RS05695;Name=LDO09_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05695;old_locus_tag=TthAA11_11200 NZ_AP024926.1 Protein Homology CDS 1055684 1056112 . - 0 ID=cds-WP_011173118.1;Parent=gene-LDO09_RS05695;Dbxref=Genbank:WP_011173118.1;Name=WP_011173118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173118.1;locus_tag=LDO09_RS05695;product=cobalamin B12-binding domain-containing protein;protein_id=WP_011173118.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1056123 1057778 . - . ID=gene-LDO09_RS05700;Name=LDO09_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05700;old_locus_tag=TthAA11_11210 NZ_AP024926.1 Protein Homology CDS 1056123 1057778 . - 0 ID=cds-WP_223968400.1;Parent=gene-LDO09_RS05700;Dbxref=Genbank:WP_223968400.1;Name=WP_223968400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048193.1;locus_tag=LDO09_RS05700;product=methylmalonyl-CoA mutase family protein;protein_id=WP_223968400.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1057926 1058792 . - . ID=gene-LDO09_RS05705;Name=LDO09_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05705;old_locus_tag=TthAA11_11220 NZ_AP024926.1 Protein Homology CDS 1057926 1058792 . - 0 ID=cds-WP_143585569.1;Parent=gene-LDO09_RS05705;Dbxref=Genbank:WP_143585569.1;Name=WP_143585569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515841.1;locus_tag=LDO09_RS05705;product=cation diffusion facilitator family transporter;protein_id=WP_143585569.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1058793 1060271 . - . ID=gene-LDO09_RS05710;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LDO09_RS05710;old_locus_tag=TthAA11_11230 NZ_AP024926.1 Protein Homology CDS 1058793 1060271 . - 0 ID=cds-WP_223968402.1;Parent=gene-LDO09_RS05710;Dbxref=Genbank:WP_223968402.1;Name=WP_223968402.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629577.1;locus_tag=LDO09_RS05710;product=lysine--tRNA ligase;protein_id=WP_223968402.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1060276 1060746 . - . ID=gene-LDO09_RS05715;Name=LDO09_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05715;old_locus_tag=TthAA11_11240 NZ_AP024926.1 Protein Homology CDS 1060276 1060746 . - 0 ID=cds-WP_011173122.1;Parent=gene-LDO09_RS05715;Dbxref=Genbank:WP_011173122.1;Name=WP_011173122.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228396.1;locus_tag=LDO09_RS05715;product=GreA/GreB family elongation factor;protein_id=WP_011173122.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1060822 1061184 . - . ID=gene-LDO09_RS05720;Name=LDO09_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05720;old_locus_tag=TthAA11_11250 NZ_AP024926.1 Protein Homology CDS 1060822 1061184 . - 0 ID=cds-WP_008632453.1;Parent=gene-LDO09_RS05720;Dbxref=Genbank:WP_008632453.1;Name=WP_008632453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173123.1;locus_tag=LDO09_RS05720;product=hypothetical protein;protein_id=WP_008632453.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1061189 1061587 . - . ID=gene-LDO09_RS05725;Name=LDO09_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05725;old_locus_tag=TthAA11_11260 NZ_AP024926.1 Protein Homology CDS 1061189 1061587 . - 0 ID=cds-WP_014629576.1;Parent=gene-LDO09_RS05725;Dbxref=Genbank:WP_014629576.1;Name=WP_014629576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228397.1;locus_tag=LDO09_RS05725;product=diacylglycerol kinase;protein_id=WP_014629576.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1061542 1061961 . - . ID=gene-LDO09_RS05730;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LDO09_RS05730;old_locus_tag=TthAA11_11270 NZ_AP024926.1 Protein Homology CDS 1061542 1061961 . - 0 ID=cds-WP_143585572.1;Parent=gene-LDO09_RS05730;Dbxref=Genbank:WP_143585572.1;Name=WP_143585572.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510352.1;locus_tag=LDO09_RS05730;product=rRNA maturation RNase YbeY;protein_id=WP_143585572.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1061939 1062934 . - . ID=gene-LDO09_RS05735;Name=LDO09_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05735;old_locus_tag=TthAA11_11280 NZ_AP024926.1 Protein Homology CDS 1061939 1062934 . - 0 ID=cds-WP_024118837.1;Parent=gene-LDO09_RS05735;Dbxref=Genbank:WP_024118837.1;Name=WP_024118837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173126.1;locus_tag=LDO09_RS05735;product=PhoH family protein;protein_id=WP_024118837.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1062898 1063251 . - . ID=gene-LDO09_RS05740;Name=LDO09_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05740;old_locus_tag=TthAA11_11290 NZ_AP024926.1 Protein Homology CDS 1062898 1063251 . - 0 ID=cds-WP_223968404.1;Parent=gene-LDO09_RS05740;Dbxref=Genbank:WP_223968404.1;Name=WP_223968404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629573.1;locus_tag=LDO09_RS05740;product=hypothetical protein;protein_id=WP_223968404.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1063248 1064225 . - . ID=gene-LDO09_RS05745;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=LDO09_RS05745;old_locus_tag=TthAA11_11300 NZ_AP024926.1 Protein Homology CDS 1063248 1064225 . - 0 ID=cds-WP_008632461.1;Parent=gene-LDO09_RS05745;Dbxref=Genbank:WP_008632461.1;Name=WP_008632461.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510355.1;locus_tag=LDO09_RS05745;product=flotillin-like protein FloA;protein_id=WP_008632461.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1064228 1065487 . - . ID=gene-LDO09_RS05750;Name=LDO09_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05750;old_locus_tag=TthAA11_11310 NZ_AP024926.1 Protein Homology CDS 1064228 1065487 . - 0 ID=cds-WP_172619187.1;Parent=gene-LDO09_RS05750;Dbxref=Genbank:WP_172619187.1;Name=WP_172619187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629572.1;locus_tag=LDO09_RS05750;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_172619187.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1065550 1066347 . + . ID=gene-LDO09_RS05755;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LDO09_RS05755;old_locus_tag=TthAA11_11320 NZ_AP024926.1 Protein Homology CDS 1065550 1066347 . + 0 ID=cds-WP_223968406.1;Parent=gene-LDO09_RS05755;Dbxref=Genbank:WP_223968406.1;Name=WP_223968406.1;Ontology_term=GO:0009423,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632466.1;locus_tag=LDO09_RS05755;product=shikimate dehydrogenase;protein_id=WP_223968406.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1066344 1066919 . + . ID=gene-LDO09_RS05760;Name=LDO09_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05760;old_locus_tag=TthAA11_11330 NZ_AP024926.1 Protein Homology CDS 1066344 1066919 . + 0 ID=cds-WP_143585582.1;Parent=gene-LDO09_RS05760;Dbxref=Genbank:WP_143585582.1;Name=WP_143585582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228404.1;locus_tag=LDO09_RS05760;product=IMPACT family protein;protein_id=WP_143585582.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1066921 1069425 . + . ID=gene-LDO09_RS05765;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LDO09_RS05765;old_locus_tag=TthAA11_11340 NZ_AP024926.1 Protein Homology CDS 1066921 1069425 . + 0 ID=cds-WP_143585584.1;Parent=gene-LDO09_RS05765;Dbxref=Genbank:WP_143585584.1;Name=WP_143585584.1;Ontology_term=GO:0006260,GO:0003887;gbkey=CDS;gene=polA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228405.1;locus_tag=LDO09_RS05765;product=DNA polymerase I;protein_id=WP_143585584.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1069450 1070763 . + . ID=gene-LDO09_RS05770;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LDO09_RS05770;old_locus_tag=TthAA11_11350 NZ_AP024926.1 Protein Homology CDS 1069450 1070763 . + 0 ID=cds-WP_143585586.1;Parent=gene-LDO09_RS05770;Dbxref=Genbank:WP_143585586.1;Name=WP_143585586.1;Ontology_term=GO:0009103,GO:0009252,GO:0008966;gbkey=CDS;gene=glmM;go_function=phosphoglucosamine mutase activity|0008966||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632473.1;locus_tag=LDO09_RS05770;product=phosphoglucosamine mutase;protein_id=WP_143585586.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1070773 1071315 . + . ID=gene-LDO09_RS05775;Name=LDO09_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05775;old_locus_tag=TthAA11_11360 NZ_AP024926.1 Protein Homology CDS 1070773 1071315 . + 0 ID=cds-WP_011228408.1;Parent=gene-LDO09_RS05775;Dbxref=Genbank:WP_011228408.1;Name=WP_011228408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228408.1;locus_tag=LDO09_RS05775;product=NYN domain-containing protein;protein_id=WP_011228408.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1071318 1072355 . + . ID=gene-LDO09_RS05780;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LDO09_RS05780;old_locus_tag=TthAA11_11370 NZ_AP024926.1 Protein Homology CDS 1071318 1072355 . + 0 ID=cds-WP_143585588.1;Parent=gene-LDO09_RS05780;Dbxref=Genbank:WP_143585588.1;Name=WP_143585588.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173135.1;locus_tag=LDO09_RS05780;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_143585588.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1072322 1073599 . - . ID=gene-LDO09_RS05785;Name=LDO09_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05785;old_locus_tag=TthAA11_11380 NZ_AP024926.1 Protein Homology CDS 1072322 1073599 . - 0 ID=cds-WP_172619188.1;Parent=gene-LDO09_RS05785;Dbxref=Genbank:WP_172619188.1;Name=WP_172619188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173136.1;locus_tag=LDO09_RS05785;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_172619188.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1073596 1074948 . - . ID=gene-LDO09_RS05790;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=LDO09_RS05790;old_locus_tag=TthAA11_11390 NZ_AP024926.1 Protein Homology CDS 1073596 1074948 . - 0 ID=cds-WP_143585590.1;Parent=gene-LDO09_RS05790;Dbxref=Genbank:WP_143585590.1;Name=WP_143585590.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228410.1;locus_tag=LDO09_RS05790;product=magnesium transporter;protein_id=WP_143585590.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1075037 1077166 . - . ID=gene-LDO09_RS05795;Name=LDO09_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05795;old_locus_tag=TthAA11_11400 NZ_AP024926.1 Protein Homology CDS 1075037 1077166 . - 0 ID=cds-WP_223965511.1;Parent=gene-LDO09_RS05795;Dbxref=Genbank:WP_223965511.1;Name=WP_223965511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510366.1;locus_tag=LDO09_RS05795;product=vWA domain-containing protein;protein_id=WP_223965511.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1077234 1078433 . - . ID=gene-LDO09_RS05800;Name=LDO09_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05800;old_locus_tag=TthAA11_11410 NZ_AP024926.1 Protein Homology CDS 1077234 1078433 . - 0 ID=cds-WP_143585595.1;Parent=gene-LDO09_RS05800;Dbxref=Genbank:WP_143585595.1;Name=WP_143585595.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048181.1;locus_tag=LDO09_RS05800;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_143585595.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1078433 1079017 . - . ID=gene-LDO09_RS05805;Name=LDO09_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05805;old_locus_tag=TthAA11_11420 NZ_AP024926.1 Protein Homology CDS 1078433 1079017 . - 0 ID=cds-WP_223965512.1;Parent=gene-LDO09_RS05805;Dbxref=Genbank:WP_223965512.1;Name=WP_223965512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173140.1;locus_tag=LDO09_RS05805;product=riboflavin synthase;protein_id=WP_223965512.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1079018 1080151 . - . ID=gene-LDO09_RS05810;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LDO09_RS05810;old_locus_tag=TthAA11_11430 NZ_AP024926.1 Protein Homology CDS 1079018 1080151 . - 0 ID=cds-WP_223965513.1;Parent=gene-LDO09_RS05810;Dbxref=Genbank:WP_223965513.1;Name=WP_223965513.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228414.1;locus_tag=LDO09_RS05810;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_223965513.1;transl_table=11 NZ_AP024926.1 cmsearch riboswitch 1080155 1080276 . - . ID=id-NZ_AP024926.1:1080155..1080276;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024926.1 RefSeq gene 1080367 1081647 . - . ID=gene-LDO09_RS05815;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LDO09_RS05815;old_locus_tag=TthAA11_11440 NZ_AP024926.1 Protein Homology CDS 1080367 1081647 . - 0 ID=cds-WP_143585601.1;Parent=gene-LDO09_RS05815;Dbxref=Genbank:WP_143585601.1;Name=WP_143585601.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112132.1;locus_tag=LDO09_RS05815;product=transcription termination factor Rho;protein_id=WP_143585601.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1081644 1082315 . - . ID=gene-LDO09_RS05820;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=LDO09_RS05820;old_locus_tag=TthAA11_11450 NZ_AP024926.1 Protein Homology CDS 1081644 1082315 . - 0 ID=cds-WP_124104495.1;Parent=gene-LDO09_RS05820;Dbxref=Genbank:WP_124104495.1;Name=WP_124104495.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632487.1;locus_tag=LDO09_RS05820;product=fructose-6-phosphate aldolase;protein_id=WP_124104495.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1082729 1085860 . + . ID=gene-LDO09_RS05825;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LDO09_RS05825;old_locus_tag=TthAA11_11460 NZ_AP024926.1 Protein Homology CDS 1082729 1085860 . + 0 ID=cds-WP_223968408.1;Parent=gene-LDO09_RS05825;Dbxref=Genbank:WP_223968408.1;Name=WP_223968408.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228416.1;locus_tag=LDO09_RS05825;product=isoleucine--tRNA ligase;protein_id=WP_223968408.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1085939 1086973 . + . ID=gene-LDO09_RS05830;Name=LDO09_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05830;old_locus_tag=TthAA11_11470 NZ_AP024926.1 Protein Homology CDS 1085939 1086973 . + 0 ID=cds-WP_223968410.1;Parent=gene-LDO09_RS05830;Dbxref=Genbank:WP_223968410.1;Name=WP_223968410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510372.1;locus_tag=LDO09_RS05830;product=Xaa-Pro peptidase family protein;protein_id=WP_223968410.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1086997 1087851 . + . ID=gene-LDO09_RS05835;Name=LDO09_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05835;old_locus_tag=TthAA11_11480 NZ_AP024926.1 Protein Homology CDS 1086997 1087851 . + 0 ID=cds-WP_008632489.1;Parent=gene-LDO09_RS05835;Dbxref=Genbank:WP_008632489.1;Name=WP_008632489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632489.1;locus_tag=LDO09_RS05835;product=permease-like cell division protein FtsX;protein_id=WP_008632489.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1087853 1089088 . + . ID=gene-LDO09_RS05840;Name=LDO09_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05840;old_locus_tag=TthAA11_11490 NZ_AP024926.1 Protein Homology CDS 1087853 1089088 . + 0 ID=cds-WP_223968412.1;Parent=gene-LDO09_RS05840;Dbxref=Genbank:WP_223968412.1;Name=WP_223968412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228419.1;locus_tag=LDO09_RS05840;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_223968412.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1089120 1089737 . - . ID=gene-LDO09_RS05845;Name=LDO09_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05845;old_locus_tag=TthAA11_11500 NZ_AP024926.1 Protein Homology CDS 1089120 1089737 . - 0 ID=cds-WP_143585609.1;Parent=gene-LDO09_RS05845;Dbxref=Genbank:WP_143585609.1;Name=WP_143585609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173147.1;locus_tag=LDO09_RS05845;product=ComF family protein;protein_id=WP_143585609.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1089718 1090710 . - . ID=gene-LDO09_RS05850;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=LDO09_RS05850;old_locus_tag=TthAA11_11510 NZ_AP024926.1 Protein Homology CDS 1089718 1090710 . - 0 ID=cds-WP_096410583.1;Parent=gene-LDO09_RS05850;Dbxref=Genbank:WP_096410583.1;Name=WP_096410583.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173148.1;locus_tag=LDO09_RS05850;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_096410583.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1090765 1090980 . - . ID=gene-LDO09_RS05855;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=LDO09_RS05855;old_locus_tag=TthAA11_11520 NZ_AP024926.1 Protein Homology CDS 1090765 1090980 . - 0 ID=cds-WP_008632496.1;Parent=gene-LDO09_RS05855;Dbxref=Genbank:WP_008632496.1;Name=WP_008632496.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF001809.0;locus_tag=LDO09_RS05855;product=50S ribosomal protein L31;protein_id=WP_008632496.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1091066 1091245 . - . ID=gene-LDO09_RS05860;Name=LDO09_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05860;old_locus_tag=TthAA11_11530 NZ_AP024926.1 Protein Homology CDS 1091066 1091245 . - 0 ID=cds-WP_143585611.1;Parent=gene-LDO09_RS05860;Dbxref=Genbank:WP_143585611.1;Name=WP_143585611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173149.1;locus_tag=LDO09_RS05860;product=hypothetical protein;protein_id=WP_143585611.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1091287 1091657 . + . ID=gene-LDO09_RS05865;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LDO09_RS05865 NZ_AP024926.1 cmsearch RNase_P_RNA 1091287 1091657 . + . ID=rna-LDO09_RS05865;Parent=gene-LDO09_RS05865;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS05865;product=RNase P RNA component class A NZ_AP024926.1 cmsearch exon 1091287 1091657 . + . ID=exon-LDO09_RS05865-1;Parent=rna-LDO09_RS05865;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS05865;product=RNase P RNA component class A NZ_AP024926.1 RefSeq gene 1091846 1092280 . + . ID=gene-LDO09_RS05870;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=LDO09_RS05870;old_locus_tag=TthAA11_11540 NZ_AP024926.1 Protein Homology CDS 1091846 1092280 . + 0 ID=cds-WP_008632499.1;Parent=gene-LDO09_RS05870;Dbxref=Genbank:WP_008632499.1;Name=WP_008632499.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717328.1;locus_tag=LDO09_RS05870;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_008632499.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1092277 1093134 . + . ID=gene-LDO09_RS05875;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LDO09_RS05875;old_locus_tag=TthAA11_11550 NZ_AP024926.1 Protein Homology CDS 1092277 1093134 . + 0 ID=cds-WP_143585613.1;Parent=gene-LDO09_RS05875;Dbxref=Genbank:WP_143585613.1;Name=WP_143585613.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173150.1;locus_tag=LDO09_RS05875;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_143585613.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1093131 1093376 . + . ID=gene-LDO09_RS05880;Name=LDO09_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05880;old_locus_tag=TthAA11_11560 NZ_AP024926.1 Protein Homology CDS 1093131 1093376 . + 0 ID=cds-WP_011173151.1;Parent=gene-LDO09_RS05880;Dbxref=Genbank:WP_011173151.1;Name=WP_011173151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173151.1;locus_tag=LDO09_RS05880;product=hypothetical protein;protein_id=WP_011173151.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1093373 1094692 . + . ID=gene-LDO09_RS05885;Name=LDO09_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05885;old_locus_tag=TthAA11_11570 NZ_AP024926.1 Protein Homology CDS 1093373 1094692 . + 0 ID=cds-WP_143586950.1;Parent=gene-LDO09_RS05885;Dbxref=Genbank:WP_143586950.1;Name=WP_143586950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510376.1;locus_tag=LDO09_RS05885;product=penicillin-binding protein 2;protein_id=WP_143586950.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1094676 1095992 . + . ID=gene-LDO09_RS05890;Name=LDO09_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05890;old_locus_tag=TthAA11_11580 NZ_AP024926.1 Protein Homology CDS 1094676 1095992 . + 0 ID=cds-WP_143585615.1;Parent=gene-LDO09_RS05890;Dbxref=Genbank:WP_143585615.1;Name=WP_143585615.1;Ontology_term=GO:0009058,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173153.1;locus_tag=LDO09_RS05890;product=Mur ligase family protein;protein_id=WP_143585615.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1095968 1096666 . + . ID=gene-LDO09_RS05895;Name=LDO09_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05895;old_locus_tag=TthAA11_11590 NZ_AP024926.1 Protein Homology CDS 1095968 1096666 . + 0 ID=cds-WP_143585617.1;Parent=gene-LDO09_RS05895;Dbxref=Genbank:WP_143585617.1;Name=WP_143585617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632502.1;locus_tag=LDO09_RS05895;product=hypothetical protein;protein_id=WP_143585617.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1096657 1097514 . + . ID=gene-LDO09_RS05900;Name=LDO09_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05900;old_locus_tag=TthAA11_11600 NZ_AP024926.1 Protein Homology CDS 1096657 1097514 . + 0 ID=cds-WP_143585619.1;Parent=gene-LDO09_RS05900;Dbxref=Genbank:WP_143585619.1;Name=WP_143585619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629549.1;locus_tag=LDO09_RS05900;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_143585619.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1097511 1098764 . + . ID=gene-LDO09_RS05905;Name=LDO09_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05905;old_locus_tag=TthAA11_11610 NZ_AP024926.1 Protein Homology CDS 1097511 1098764 . + 0 ID=cds-WP_143585621.1;Parent=gene-LDO09_RS05905;Dbxref=Genbank:WP_143585621.1;Name=WP_143585621.1;Ontology_term=GO:0009058,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629548.1;locus_tag=LDO09_RS05905;product=Mur ligase family protein;protein_id=WP_143585621.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1098743 1099804 . + . ID=gene-LDO09_RS05910;Name=LDO09_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05910;old_locus_tag=TthAA11_11620 NZ_AP024926.1 Protein Homology CDS 1098743 1099804 . + 0 ID=cds-WP_143585623.1;Parent=gene-LDO09_RS05910;Dbxref=Genbank:WP_143585623.1;Name=WP_143585623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173157.1;locus_tag=LDO09_RS05910;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_143585623.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1099801 1100820 . + . ID=gene-LDO09_RS05915;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LDO09_RS05915;old_locus_tag=TthAA11_11630 NZ_AP024926.1 Protein Homology CDS 1099801 1100820 . + 0 ID=cds-WP_143585625.1;Parent=gene-LDO09_RS05915;Dbxref=Genbank:WP_143585625.1;Name=WP_143585625.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632510.1;locus_tag=LDO09_RS05915;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_143585625.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1100817 1102157 . + . ID=gene-LDO09_RS05920;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LDO09_RS05920;old_locus_tag=TthAA11_11640 NZ_AP024926.1 Protein Homology CDS 1100817 1102157 . + 0 ID=cds-WP_143585627.1;Parent=gene-LDO09_RS05920;Dbxref=Genbank:WP_143585627.1;Name=WP_143585627.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510381.1;locus_tag=LDO09_RS05920;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_143585627.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1102147 1102944 . + . ID=gene-LDO09_RS05925;Name=LDO09_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05925;old_locus_tag=TthAA11_11650 NZ_AP024926.1 Protein Homology CDS 1102147 1102944 . + 0 ID=cds-WP_143585629.1;Parent=gene-LDO09_RS05925;Dbxref=Genbank:WP_143585629.1;Name=WP_143585629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228429.1;locus_tag=LDO09_RS05925;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_143585629.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1102957 1103541 . + . ID=gene-LDO09_RS05930;Name=LDO09_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05930;old_locus_tag=TthAA11_11660 NZ_AP024926.1 Protein Homology CDS 1102957 1103541 . + 0 ID=cds-WP_143585631.1;Parent=gene-LDO09_RS05930;Dbxref=Genbank:WP_143585631.1;Name=WP_143585631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632515.1;locus_tag=LDO09_RS05930;product=FtsQ-type POTRA domain-containing protein;protein_id=WP_143585631.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1103538 1104773 . + . ID=gene-LDO09_RS05935;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LDO09_RS05935;old_locus_tag=TthAA11_11670 NZ_AP024926.1 Protein Homology CDS 1103538 1104773 . + 0 ID=cds-WP_011173162.1;Parent=gene-LDO09_RS05935;Dbxref=Genbank:WP_011173162.1;Name=WP_011173162.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629542.1;locus_tag=LDO09_RS05935;product=cell division protein FtsA;protein_id=WP_011173162.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1104786 1105844 . + . ID=gene-LDO09_RS05940;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LDO09_RS05940;old_locus_tag=TthAA11_11680 NZ_AP024926.1 Protein Homology CDS 1104786 1105844 . + 0 ID=cds-WP_011173163.1;Parent=gene-LDO09_RS05940;Dbxref=Genbank:WP_011173163.1;Name=WP_011173163.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632517.1;locus_tag=LDO09_RS05940;product=cell division protein FtsZ;protein_id=WP_011173163.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1105858 1106358 . + . ID=gene-LDO09_RS05945;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LDO09_RS05945;old_locus_tag=TthAA11_11690 NZ_AP024926.1 Protein Homology CDS 1105858 1106358 . + 0 ID=cds-WP_011173164.1;Parent=gene-LDO09_RS05945;Dbxref=Genbank:WP_011173164.1;Name=WP_011173164.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551133.1;locus_tag=LDO09_RS05945;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_011173164.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1106459 1106944 . - . ID=gene-LDO09_RS05950;Name=LDO09_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05950;old_locus_tag=TthAA11_11700 NZ_AP024926.1 Protein Homology CDS 1106459 1106944 . - 0 ID=cds-WP_011173165.1;Parent=gene-LDO09_RS05950;Dbxref=Genbank:WP_011173165.1;Name=WP_011173165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550974.1;locus_tag=LDO09_RS05950;product=adenosine-specific kinase;protein_id=WP_011173165.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1106966 1108108 . + . ID=gene-LDO09_RS05955;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=LDO09_RS05955;old_locus_tag=TthAA11_11710 NZ_AP024926.1 Protein Homology CDS 1106966 1108108 . + 0 ID=cds-WP_014629541.1;Parent=gene-LDO09_RS05955;Dbxref=Genbank:WP_014629541.1;Name=WP_014629541.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: protein motif:HMM:TIGR00937.1;locus_tag=LDO09_RS05955;product=chromate efflux transporter;protein_id=WP_014629541.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1108118 1109260 . + . ID=gene-LDO09_RS05960;Name=mqnC;gbkey=Gene;gene=mqnC;gene_biotype=protein_coding;locus_tag=LDO09_RS05960;old_locus_tag=TthAA11_11720 NZ_AP024926.1 Protein Homology CDS 1108118 1109260 . + 0 ID=cds-WP_014629540.1;Parent=gene-LDO09_RS05960;Dbxref=Genbank:WP_014629540.1;Name=WP_014629540.1;Ontology_term=GO:0009234;gbkey=CDS;gene=mqnC;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228432.1;locus_tag=LDO09_RS05960;product=dehypoxanthine futalosine cyclase;protein_id=WP_014629540.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1109257 1109766 . - . ID=gene-LDO09_RS05965;Name=LDO09_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05965;old_locus_tag=TthAA11_11730 NZ_AP024926.1 Protein Homology CDS 1109257 1109766 . - 0 ID=cds-WP_223968414.1;Parent=gene-LDO09_RS05965;Dbxref=Genbank:WP_223968414.1;Name=WP_223968414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629539.1;locus_tag=LDO09_RS05965;product=hypothetical protein;protein_id=WP_223968414.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1109815 1110612 . - . ID=gene-LDO09_RS05970;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LDO09_RS05970;old_locus_tag=TthAA11_11740 NZ_AP024926.1 Protein Homology CDS 1109815 1110612 . - 0 ID=cds-WP_143585637.1;Parent=gene-LDO09_RS05970;Dbxref=Genbank:WP_143585637.1;Name=WP_143585637.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510387.1;locus_tag=LDO09_RS05970;product=tryptophan synthase subunit alpha;protein_id=WP_143585637.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1110609 1111865 . - . ID=gene-LDO09_RS05975;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LDO09_RS05975;old_locus_tag=TthAA11_11750 NZ_AP024926.1 Protein Homology CDS 1110609 1111865 . - 0 ID=cds-WP_143585639.1;Parent=gene-LDO09_RS05975;Dbxref=Genbank:WP_143585639.1;Name=WP_143585639.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173169.1;locus_tag=LDO09_RS05975;product=tryptophan synthase subunit beta;protein_id=WP_143585639.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1111902 1112714 . + . ID=gene-LDO09_RS05980;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=LDO09_RS05980;old_locus_tag=TthAA11_11760 NZ_AP024926.1 Protein Homology CDS 1111902 1112714 . + 0 ID=cds-WP_008632524.1;Parent=gene-LDO09_RS05980;Dbxref=Genbank:WP_008632524.1;Name=WP_008632524.1;Ontology_term=GO:0009265,GO:0050797;gbkey=CDS;gene=thyX;go_function=thymidylate synthase (FAD) activity|0050797||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629536.1;locus_tag=LDO09_RS05980;product=FAD-dependent thymidylate synthase;protein_id=WP_008632524.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1112711 1114741 . - . ID=gene-LDO09_RS05985;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LDO09_RS05985;old_locus_tag=TthAA11_11770 NZ_AP024926.1 Protein Homology CDS 1112711 1114741 . - 0 ID=cds-WP_143585642.1;Parent=gene-LDO09_RS05985;Dbxref=Genbank:WP_143585642.1;Name=WP_143585642.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228436.1;locus_tag=LDO09_RS05985;product=NAD-dependent DNA ligase LigA;protein_id=WP_143585642.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1114814 1116001 . + . ID=gene-LDO09_RS05990;Name=LDO09_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05990;old_locus_tag=TthAA11_11780 NZ_AP024926.1 Protein Homology CDS 1114814 1116001 . + 0 ID=cds-WP_014629534.1;Parent=gene-LDO09_RS05990;Dbxref=Genbank:WP_014629534.1;Name=WP_014629534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173172.1;locus_tag=LDO09_RS05990;product=BMP family ABC transporter substrate-binding protein;protein_id=WP_014629534.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1116060 1117550 . + . ID=gene-LDO09_RS05995;Name=LDO09_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS05995;old_locus_tag=TthAA11_11790 NZ_AP024926.1 Protein Homology CDS 1116060 1117550 . + 0 ID=cds-WP_143585645.1;Parent=gene-LDO09_RS05995;Dbxref=Genbank:WP_143585645.1;Name=WP_143585645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228438.1;locus_tag=LDO09_RS05995;product=ABC transporter ATP-binding protein;protein_id=WP_143585645.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1117582 1118511 . - . ID=gene-LDO09_RS06000;Name=LDO09_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06000;old_locus_tag=TthAA11_11800 NZ_AP024926.1 Protein Homology CDS 1117582 1118511 . - 0 ID=cds-WP_143585647.1;Parent=gene-LDO09_RS06000;Dbxref=Genbank:WP_143585647.1;Name=WP_143585647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173174.1;locus_tag=LDO09_RS06000;product=hypothetical protein;protein_id=WP_143585647.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1118512 1119372 . - . ID=gene-LDO09_RS06005;Name=LDO09_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06005;old_locus_tag=TthAA11_11810 NZ_AP024926.1 Protein Homology CDS 1118512 1119372 . - 0 ID=cds-WP_143585649.1;Parent=gene-LDO09_RS06005;Dbxref=Genbank:WP_143585649.1;Name=WP_143585649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632529.1;locus_tag=LDO09_RS06005;product=OstA family protein;protein_id=WP_143585649.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1119369 1119914 . - . ID=gene-LDO09_RS06010;Name=LDO09_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06010;old_locus_tag=TthAA11_11820 NZ_AP024926.1 Protein Homology CDS 1119369 1119914 . - 0 ID=cds-WP_143586952.1;Parent=gene-LDO09_RS06010;Dbxref=Genbank:WP_143586952.1;Name=WP_143586952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510393.1;locus_tag=LDO09_RS06010;product=hypothetical protein;protein_id=WP_143586952.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1119957 1120979 . - . ID=gene-LDO09_RS06015;Name=LDO09_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06015;old_locus_tag=TthAA11_11830 NZ_AP024926.1 Protein Homology CDS 1119957 1120979 . - 0 ID=cds-WP_143585651.1;Parent=gene-LDO09_RS06015;Dbxref=Genbank:WP_143585651.1;Name=WP_143585651.1;Ontology_term=GO:0044038,GO:0016755;gbkey=CDS;go_function=aminoacyltransferase activity|0016755||IEA;go_process=cell wall macromolecule biosynthetic process|0044038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173177.1;locus_tag=LDO09_RS06015;product=peptidoglycan bridge formation glycyltransferase FemA/FemB family protein;protein_id=WP_143585651.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1121043 1121876 . + . ID=gene-LDO09_RS06020;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LDO09_RS06020;old_locus_tag=TthAA11_11840 NZ_AP024926.1 Protein Homology CDS 1121043 1121876 . + 0 ID=cds-WP_038038884.1;Parent=gene-LDO09_RS06020;Dbxref=Genbank:WP_038038884.1;Name=WP_038038884.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632532.1;locus_tag=LDO09_RS06020;product=prephenate dehydratase;protein_id=WP_038038884.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1121863 1122264 . - . ID=gene-LDO09_RS06025;Name=LDO09_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06025;old_locus_tag=TthAA11_11850 NZ_AP024926.1 Protein Homology CDS 1121863 1122264 . - 0 ID=cds-WP_011228443.1;Parent=gene-LDO09_RS06025;Dbxref=Genbank:WP_011228443.1;Name=WP_011228443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228443.1;locus_tag=LDO09_RS06025;product=hypothetical protein;protein_id=WP_011228443.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1122261 1123694 . - . ID=gene-LDO09_RS06030;Name=LDO09_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06030;old_locus_tag=TthAA11_11860 NZ_AP024926.1 Protein Homology CDS 1122261 1123694 . - 0 ID=cds-WP_223965518.1;Parent=gene-LDO09_RS06030;Dbxref=Genbank:WP_223965518.1;Name=WP_223965518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228444.1;locus_tag=LDO09_RS06030;product=O-antigen ligase family protein;protein_id=WP_223965518.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1123761 1124390 . + . ID=gene-LDO09_RS06035;Name=LDO09_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06035;old_locus_tag=TthAA11_11870 NZ_AP024926.1 Protein Homology CDS 1123761 1124390 . + 0 ID=cds-WP_011173180.1;Parent=gene-LDO09_RS06035;Dbxref=Genbank:WP_011173180.1;Name=WP_011173180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632535.1;locus_tag=LDO09_RS06035;product=hypothetical protein;protein_id=WP_011173180.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1124387 1125493 . + . ID=gene-LDO09_RS06040;Name=LDO09_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06040;old_locus_tag=TthAA11_11880 NZ_AP024926.1 Protein Homology CDS 1124387 1125493 . + 0 ID=cds-WP_223968417.1;Parent=gene-LDO09_RS06040;Dbxref=Genbank:WP_223968417.1;Name=WP_223968417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173181.1;locus_tag=LDO09_RS06040;product=LptF/LptG family permease;protein_id=WP_223968417.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1125503 1126603 . + . ID=gene-LDO09_RS06045;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=LDO09_RS06045;old_locus_tag=TthAA11_11890 NZ_AP024926.1 Protein Homology CDS 1125503 1126603 . + 0 ID=cds-WP_143585657.1;Parent=gene-LDO09_RS06045;Dbxref=Genbank:WP_143585657.1;Name=WP_143585657.1;Ontology_term=GO:0071793;gbkey=CDS;gene=bshA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629524.1;locus_tag=LDO09_RS06045;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=WP_143585657.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1126600 1129014 . - . ID=gene-LDO09_RS06050;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LDO09_RS06050;old_locus_tag=TthAA11_11900 NZ_AP024926.1 Protein Homology CDS 1126600 1129014 . - 0 ID=cds-WP_143585659.1;Parent=gene-LDO09_RS06050;Dbxref=Genbank:WP_143585659.1;Name=WP_143585659.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173183.1;locus_tag=LDO09_RS06050;product=endopeptidase La;protein_id=WP_143585659.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1129127 1129987 . + . ID=gene-LDO09_RS06055;Name=LDO09_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06055;old_locus_tag=TthAA11_11910 NZ_AP024926.1 Protein Homology CDS 1129127 1129987 . + 0 ID=cds-WP_223968419.1;Parent=gene-LDO09_RS06055;Dbxref=Genbank:WP_223968419.1;Name=WP_223968419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510400.1;locus_tag=LDO09_RS06055;product=DUF1517 domain-containing protein;protein_id=WP_223968419.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1129984 1130916 . - . ID=gene-LDO09_RS06060;Name=LDO09_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06060;old_locus_tag=TthAA11_11920 NZ_AP024926.1 Protein Homology CDS 1129984 1130916 . - 0 ID=cds-WP_011173185.1;Parent=gene-LDO09_RS06060;Dbxref=Genbank:WP_011173185.1;Name=WP_011173185.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629521.1;locus_tag=LDO09_RS06060;product=L-lactate dehydrogenase;protein_id=WP_011173185.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1130932 1131870 . + . ID=gene-LDO09_RS06065;Name=LDO09_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06065;old_locus_tag=TthAA11_11930 NZ_AP024926.1 Protein Homology CDS 1130932 1131870 . + 0 ID=cds-WP_143585663.1;Parent=gene-LDO09_RS06065;Dbxref=Genbank:WP_143585663.1;Name=WP_143585663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173186.1;locus_tag=LDO09_RS06065;product=alpha/beta hydrolase-fold protein;protein_id=WP_143585663.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1131867 1132541 . + . ID=gene-LDO09_RS06070;Name=LDO09_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06070;old_locus_tag=TthAA11_11940 NZ_AP024926.1 Protein Homology CDS 1131867 1132541 . + 0 ID=cds-WP_223965519.1;Parent=gene-LDO09_RS06070;Dbxref=Genbank:WP_223965519.1;Name=WP_223965519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629519.1;locus_tag=LDO09_RS06070;product=hypothetical protein;protein_id=WP_223965519.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1132534 1133070 . + . ID=gene-LDO09_RS06075;Name=LDO09_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06075;old_locus_tag=TthAA11_11950 NZ_AP024926.1 Protein Homology CDS 1132534 1133070 . + 0 ID=cds-WP_143585667.1;Parent=gene-LDO09_RS06075;Dbxref=Genbank:WP_143585667.1;Name=WP_143585667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632542.1;locus_tag=LDO09_RS06075;product=class I SAM-dependent methyltransferase;protein_id=WP_143585667.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1133060 1135045 . - . ID=gene-LDO09_RS06080;Name=LDO09_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06080;old_locus_tag=TthAA11_11960 NZ_AP024926.1 Protein Homology CDS 1133060 1135045 . - 0 ID=cds-WP_143585669.1;Parent=gene-LDO09_RS06080;Dbxref=Genbank:WP_143585669.1;Name=WP_143585669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550516.1;locus_tag=LDO09_RS06080;product=(Fe-S)-binding protein;protein_id=WP_143585669.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1135120 1135323 . + . ID=gene-LDO09_RS06085;Name=LDO09_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06085;old_locus_tag=TthAA11_11970 NZ_AP024926.1 Protein Homology CDS 1135120 1135323 . + 0 ID=cds-WP_008632546.1;Parent=gene-LDO09_RS06085;Dbxref=Genbank:WP_008632546.1;Name=WP_008632546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632546.1;locus_tag=LDO09_RS06085;product=hypothetical protein;protein_id=WP_008632546.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1135299 1135754 . - . ID=gene-LDO09_RS06090;Name=LDO09_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06090;old_locus_tag=TthAA11_11980 NZ_AP024926.1 Protein Homology CDS 1135299 1135754 . - 0 ID=cds-WP_008632547.1;Parent=gene-LDO09_RS06090;Dbxref=Genbank:WP_008632547.1;Name=WP_008632547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329692.1;locus_tag=LDO09_RS06090;product=divergent PAP2 family protein;protein_id=WP_008632547.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1135738 1136586 . - . ID=gene-LDO09_RS06095;Name=LDO09_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06095;old_locus_tag=TthAA11_11990 NZ_AP024926.1 Protein Homology CDS 1135738 1136586 . - 0 ID=cds-WP_143585671.1;Parent=gene-LDO09_RS06095;Dbxref=Genbank:WP_143585671.1;Name=WP_143585671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629516.1;locus_tag=LDO09_RS06095;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=WP_143585671.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1136587 1137042 . - . ID=gene-LDO09_RS06100;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LDO09_RS06100;old_locus_tag=TthAA11_12000 NZ_AP024926.1 Protein Homology CDS 1136587 1137042 . - 0 ID=cds-WP_008632549.1;Parent=gene-LDO09_RS06100;Dbxref=Genbank:WP_008632549.1;Name=WP_008632549.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632549.1;locus_tag=LDO09_RS06100;product=transcription antitermination factor NusB;protein_id=WP_008632549.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1137026 1137364 . - . ID=gene-LDO09_RS06105;Name=LDO09_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06105;old_locus_tag=TthAA11_12010 NZ_AP024926.1 Protein Homology CDS 1137026 1137364 . - 0 ID=cds-WP_060384405.1;Parent=gene-LDO09_RS06105;Dbxref=Genbank:WP_060384405.1;Name=WP_060384405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629514.1;locus_tag=LDO09_RS06105;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_060384405.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1137375 1138712 . - . ID=gene-LDO09_RS06110;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LDO09_RS06110;old_locus_tag=TthAA11_12020 NZ_AP024926.1 Protein Homology CDS 1137375 1138712 . - 0 ID=cds-WP_143585673.1;Parent=gene-LDO09_RS06110;Dbxref=Genbank:WP_143585673.1;Name=WP_143585673.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550513.1;locus_tag=LDO09_RS06110;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_143585673.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1138709 1139206 . - . ID=gene-LDO09_RS06115;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LDO09_RS06115;old_locus_tag=TthAA11_12030 NZ_AP024926.1 Protein Homology CDS 1138709 1139206 . - 0 ID=cds-WP_143585675.1;Parent=gene-LDO09_RS06115;Dbxref=Genbank:WP_143585675.1;Name=WP_143585675.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629512.1;locus_tag=LDO09_RS06115;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_143585675.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1139302 1139856 . - . ID=gene-LDO09_RS06120;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LDO09_RS06120;old_locus_tag=TthAA11_12040 NZ_AP024926.1 Protein Homology CDS 1139302 1139856 . - 0 ID=cds-WP_011173195.1;Parent=gene-LDO09_RS06120;Dbxref=Genbank:WP_011173195.1;Name=WP_011173195.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173195.1;locus_tag=LDO09_RS06120;product=elongation factor P;protein_id=WP_011173195.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1139853 1140755 . - . ID=gene-LDO09_RS06125;Name=LDO09_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06125;old_locus_tag=TthAA11_12050 NZ_AP024926.1 Protein Homology CDS 1139853 1140755 . - 0 ID=cds-WP_143585677.1;Parent=gene-LDO09_RS06125;Dbxref=Genbank:WP_143585677.1;Name=WP_143585677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173196.1;locus_tag=LDO09_RS06125;product=quinate 5-dehydrogenase;protein_id=WP_143585677.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1140762 1140926 . - . ID=gene-LDO09_RS06130;Name=LDO09_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06130;old_locus_tag=TthAA11_12060 NZ_AP024926.1 Protein Homology CDS 1140762 1140926 . - 0 ID=cds-WP_172619189.1;Parent=gene-LDO09_RS06130;Dbxref=Genbank:WP_172619189.1;Name=WP_172619189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173197.1;locus_tag=LDO09_RS06130;product=hypothetical protein;protein_id=WP_172619189.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1140936 1141820 . - . ID=gene-LDO09_RS06135;Name=LDO09_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06135;old_locus_tag=TthAA11_12070 NZ_AP024926.1 Protein Homology CDS 1140936 1141820 . - 0 ID=cds-WP_143585679.1;Parent=gene-LDO09_RS06135;Dbxref=Genbank:WP_143585679.1;Name=WP_143585679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632597.1;locus_tag=LDO09_RS06135;product=alpha/beta fold hydrolase;protein_id=WP_143585679.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1141850 1142731 . - . ID=gene-LDO09_RS06140;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO09_RS06140;old_locus_tag=TthAA11_12080 NZ_AP024926.1 Protein Homology CDS 1141850 1142731 . - 0 ID=cds-WP_143585682.1;Parent=gene-LDO09_RS06140;Dbxref=Genbank:WP_143585682.1;Name=WP_143585682.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228458.1;locus_tag=LDO09_RS06140;product=agmatinase;protein_id=WP_143585682.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1142750 1144075 . - . ID=gene-LDO09_RS06145;Name=LDO09_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06145;old_locus_tag=TthAA11_12090 NZ_AP024926.1 Protein Homology CDS 1142750 1144075 . - 0 ID=cds-WP_223968421.1;Parent=gene-LDO09_RS06145;Dbxref=Genbank:WP_223968421.1;Name=WP_223968421.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173200.1;locus_tag=LDO09_RS06145;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_223968421.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1144093 1144584 . + . ID=gene-LDO09_RS06150;Name=LDO09_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06150;old_locus_tag=TthAA11_12100 NZ_AP024926.1 Protein Homology CDS 1144093 1144584 . + 0 ID=cds-WP_143585686.1;Parent=gene-LDO09_RS06150;Dbxref=Genbank:WP_143585686.1;Name=WP_143585686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510411.1;locus_tag=LDO09_RS06150;product=roadblock/LC7 domain-containing protein;protein_id=WP_143585686.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1144591 1145181 . + . ID=gene-LDO09_RS06155;Name=LDO09_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06155;old_locus_tag=TthAA11_12110 NZ_AP024926.1 Protein Homology CDS 1144591 1145181 . + 0 ID=cds-WP_011228461.1;Parent=gene-LDO09_RS06155;Dbxref=Genbank:WP_011228461.1;Name=WP_011228461.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510412.1;locus_tag=LDO09_RS06155;product=ADP-ribosylation factor-like protein;protein_id=WP_011228461.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1145367 1145471 . + . ID=gene-LDO09_RS06160;Name=cbaD;gbkey=Gene;gene=cbaD;gene_biotype=protein_coding;locus_tag=LDO09_RS06160 NZ_AP024926.1 Protein Homology CDS 1145367 1145471 . + 0 ID=cds-WP_008632613.1;Parent=gene-LDO09_RS06160;Dbxref=Genbank:WP_008632613.1;Name=WP_008632613.1;gbkey=CDS;gene=cbaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632613.1;locus_tag=LDO09_RS06160;product=ctochrome c oxidase polypeptide 2A;protein_id=WP_008632613.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1145474 1145980 . + . ID=gene-LDO09_RS06165;Name=cbaB;gbkey=Gene;gene=cbaB;gene_biotype=protein_coding;locus_tag=LDO09_RS06165;old_locus_tag=TthAA11_12130 NZ_AP024926.1 Protein Homology CDS 1145474 1145980 . + 0 ID=cds-WP_014629505.1;Parent=gene-LDO09_RS06165;Dbxref=Genbank:WP_014629505.1;Name=WP_014629505.1;gbkey=CDS;gene=cbaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173203.1;locus_tag=LDO09_RS06165;product=ba3-type cytochrome C oxidase subunit II;protein_id=WP_014629505.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1145984 1147672 . + . ID=gene-LDO09_RS06170;Name=cbaA;gbkey=Gene;gene=cbaA;gene_biotype=protein_coding;locus_tag=LDO09_RS06170;old_locus_tag=TthAA11_12140 NZ_AP024926.1 Protein Homology CDS 1145984 1147672 . + 0 ID=cds-WP_223968429.1;Parent=gene-LDO09_RS06170;Dbxref=Genbank:WP_223968429.1;Name=WP_223968429.1;gbkey=CDS;gene=cbaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173204.1;locus_tag=LDO09_RS06170;product=ba3-type cytochrome C oxidase subunit I;protein_id=WP_223968429.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1147728 1148198 . + . ID=gene-LDO09_RS06175;Name=LDO09_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06175;old_locus_tag=TthAA11_12150 NZ_AP024926.1 Protein Homology CDS 1147728 1148198 . + 0 ID=cds-WP_223969129.1;Parent=gene-LDO09_RS06175;Dbxref=Genbank:WP_223969129.1;Name=WP_223969129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173205.1;locus_tag=LDO09_RS06175;product=hypothetical protein;protein_id=WP_223969129.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1148195 1149343 . + . ID=gene-LDO09_RS06180;Name=LDO09_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06180;old_locus_tag=TthAA11_12160 NZ_AP024926.1 Protein Homology CDS 1148195 1149343 . + 0 ID=cds-WP_223968431.1;Parent=gene-LDO09_RS06180;Dbxref=Genbank:WP_223968431.1;Name=WP_223968431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228462.1;locus_tag=LDO09_RS06180;product=MFS transporter;protein_id=WP_223968431.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1149412 1149681 . + . ID=gene-LDO09_RS06185;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LDO09_RS06185;old_locus_tag=TthAA11_12170 NZ_AP024926.1 Protein Homology CDS 1149412 1149681 . + 0 ID=cds-WP_008632621.1;Parent=gene-LDO09_RS06185;Dbxref=Genbank:WP_008632621.1;Name=WP_008632621.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632621.1;locus_tag=LDO09_RS06185;product=30S ribosomal protein S15;protein_id=WP_008632621.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1149743 1151884 . + . ID=gene-LDO09_RS06190;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LDO09_RS06190;old_locus_tag=TthAA11_12180 NZ_AP024926.1 Protein Homology CDS 1149743 1151884 . + 0 ID=cds-WP_143590095.1;Parent=gene-LDO09_RS06190;Dbxref=Genbank:WP_143590095.1;Name=WP_143590095.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173207.1;locus_tag=LDO09_RS06190;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_143590095.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1151941 1153662 . + . ID=gene-LDO09_RS06195;Name=LDO09_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06195;old_locus_tag=TthAA11_12190 NZ_AP024926.1 Protein Homology CDS 1151941 1153662 . + 0 ID=cds-WP_143585692.1;Parent=gene-LDO09_RS06195;Dbxref=Genbank:WP_143585692.1;Name=WP_143585692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173208.1;locus_tag=LDO09_RS06195;product=ribonuclease J;protein_id=WP_143585692.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1153666 1154106 . + . ID=gene-LDO09_RS06200;Name=LDO09_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06200;old_locus_tag=TthAA11_12200 NZ_AP024926.1 Protein Homology CDS 1153666 1154106 . + 0 ID=cds-WP_014629499.1;Parent=gene-LDO09_RS06200;Dbxref=Genbank:WP_014629499.1;Name=WP_014629499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329714.1;locus_tag=LDO09_RS06200;product=universal stress protein;protein_id=WP_014629499.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1154091 1154600 . - . ID=gene-LDO09_RS06205;Name=LDO09_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06205;old_locus_tag=TthAA11_12210 NZ_AP024926.1 Protein Homology CDS 1154091 1154600 . - 0 ID=cds-WP_267461183.1;Parent=gene-LDO09_RS06205;Dbxref=Genbank:WP_267461183.1;Name=WP_267461183.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013832.2;locus_tag=LDO09_RS06205;product=hypothetical protein;protein_id=WP_267461183.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1154657 1155178 . + . ID=gene-LDO09_RS12105;Name=LDO09_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12105;old_locus_tag=TthAA11_12220 NZ_AP024926.1 Protein Homology CDS 1154657 1155178 . + 0 ID=cds-WP_223965695.1-2;Parent=gene-LDO09_RS12105;Dbxref=Genbank:WP_223965695.1;Name=WP_223965695.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=LDO09_RS12105;product=IS630 family transposase;protein_id=WP_223965695.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1155175 1155699 . + . ID=gene-LDO09_RS12110;Name=LDO09_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12110;old_locus_tag=TthAA11_12230 NZ_AP024926.1 Protein Homology CDS 1155175 1155699 . + 0 ID=cds-WP_014509880.1-3;Parent=gene-LDO09_RS12110;Dbxref=Genbank:WP_014509880.1;Name=WP_014509880.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=LDO09_RS12110;product=IS630 family transposase;protein_id=WP_014509880.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1155789 1156148 . - . ID=gene-LDO09_RS12115;Name=LDO09_RS12115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS12115;partial=true;pseudo=true;start_range=.,1155789 NZ_AP024926.1 Protein Homology CDS 1155789 1156148 . - 0 ID=cds-LDO09_RS12115;Parent=gene-LDO09_RS12115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013832.2;locus_tag=LDO09_RS12115;partial=true;product=sodium:proton exchanger;pseudo=true;start_range=.,1155789;transl_table=11 NZ_AP024926.1 RefSeq gene 1156145 1156606 . - . ID=gene-LDO09_RS06225;Name=LDO09_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06225;old_locus_tag=TthAA11_12250 NZ_AP024926.1 Protein Homology CDS 1156145 1156606 . - 0 ID=cds-WP_143585694.1;Parent=gene-LDO09_RS06225;Dbxref=Genbank:WP_143585694.1;Name=WP_143585694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629497.1;locus_tag=LDO09_RS06225;product=CBS domain-containing protein;protein_id=WP_143585694.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1156603 1159020 . - . ID=gene-LDO09_RS06230;Name=LDO09_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06230;old_locus_tag=TthAA11_12260 NZ_AP024926.1 Protein Homology CDS 1156603 1159020 . - 0 ID=cds-WP_143585696.1;Parent=gene-LDO09_RS06230;Dbxref=Genbank:WP_143585696.1;Name=WP_143585696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629496.1;locus_tag=LDO09_RS06230;product=cation-transporting P-type ATPase;protein_id=WP_143585696.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1159026 1159409 . - . ID=gene-LDO09_RS06235;Name=LDO09_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06235;old_locus_tag=TthAA11_12270 NZ_AP024926.1 Protein Homology CDS 1159026 1159409 . - 0 ID=cds-WP_014629495.1;Parent=gene-LDO09_RS06235;Dbxref=Genbank:WP_014629495.1;Name=WP_014629495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629495.1;locus_tag=LDO09_RS06235;product=response regulator transcription factor;protein_id=WP_014629495.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1159387 1162275 . - . ID=gene-LDO09_RS06240;Name=LDO09_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06240;old_locus_tag=TthAA11_12280 NZ_AP024926.1 Protein Homology CDS 1159387 1162275 . - 0 ID=cds-WP_143585698.1;Parent=gene-LDO09_RS06240;Dbxref=Genbank:WP_143585698.1;Name=WP_143585698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510421.1;locus_tag=LDO09_RS06240;product=ATP-binding protein;protein_id=WP_143585698.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1162372 1163517 . + . ID=gene-LDO09_RS06245;Name=LDO09_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06245;old_locus_tag=TthAA11_12290 NZ_AP024926.1 Protein Homology CDS 1162372 1163517 . + 0 ID=cds-WP_165738558.1;Parent=gene-LDO09_RS06245;Dbxref=Genbank:WP_165738558.1;Name=WP_165738558.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629493.1;locus_tag=LDO09_RS06245;product=acyl-CoA dehydrogenase family protein;protein_id=WP_165738558.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1163529 1164272 . + . ID=gene-LDO09_RS06250;Name=LDO09_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06250;old_locus_tag=TthAA11_12300 NZ_AP024926.1 Protein Homology CDS 1163529 1164272 . + 0 ID=cds-WP_143585702.1;Parent=gene-LDO09_RS06250;Dbxref=Genbank:WP_143585702.1;Name=WP_143585702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003045576.1;locus_tag=LDO09_RS06250;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_143585702.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1164282 1165226 . + . ID=gene-LDO09_RS06255;Name=LDO09_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06255;old_locus_tag=TthAA11_12310 NZ_AP024926.1 Protein Homology CDS 1164282 1165226 . + 0 ID=cds-WP_172619190.1;Parent=gene-LDO09_RS06255;Dbxref=Genbank:WP_172619190.1;Name=WP_172619190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629491.1;locus_tag=LDO09_RS06255;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_172619190.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1165321 1165782 . - . ID=gene-LDO09_RS06260;Name=LDO09_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06260;old_locus_tag=TthAA11_12320 NZ_AP024926.1 Protein Homology CDS 1165321 1165782 . - 0 ID=cds-WP_014629490.1;Parent=gene-LDO09_RS06260;Dbxref=Genbank:WP_014629490.1;Name=WP_014629490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629490.1;locus_tag=LDO09_RS06260;product=hypothetical protein;protein_id=WP_014629490.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1165854 1167419 . + . ID=gene-LDO09_RS06265;Name=LDO09_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06265;old_locus_tag=TthAA11_12330 NZ_AP024926.1 Protein Homology CDS 1165854 1167419 . + 0 ID=cds-WP_223968433.1;Parent=gene-LDO09_RS06265;Dbxref=Genbank:WP_223968433.1;Name=WP_223968433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329722.1;locus_tag=LDO09_RS06265;product=acyl-CoA carboxylase subunit beta;protein_id=WP_223968433.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1167419 1168078 . + . ID=gene-LDO09_RS06270;Name=LDO09_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06270;old_locus_tag=TthAA11_12340 NZ_AP024926.1 Protein Homology CDS 1167419 1168078 . + 0 ID=cds-WP_223968442.1;Parent=gene-LDO09_RS06270;Dbxref=Genbank:WP_223968442.1;Name=WP_223968442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173217.1;locus_tag=LDO09_RS06270;product=type-5 uracil-DNA glycosylase;protein_id=WP_223968442.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1168056 1169783 . - . ID=gene-LDO09_RS06275;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=LDO09_RS06275;old_locus_tag=TthAA11_12350 NZ_AP024926.1 Protein Homology CDS 1168056 1169783 . - 0 ID=cds-WP_223965528.1;Parent=gene-LDO09_RS06275;Dbxref=Genbank:WP_223965528.1;Name=WP_223965528.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632639.1;locus_tag=LDO09_RS06275;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_223965528.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1169819 1170058 . + . ID=gene-LDO09_RS06280;Name=LDO09_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06280;old_locus_tag=TthAA11_12360 NZ_AP024926.1 Protein Homology CDS 1169819 1170058 . + 0 ID=cds-WP_143585714.1;Parent=gene-LDO09_RS06280;Dbxref=Genbank:WP_143585714.1;Name=WP_143585714.1;Ontology_term=GO:0006351,GO:0006355;gbkey=CDS;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173219.1;locus_tag=LDO09_RS06280;product=HTH domain-containing protein;protein_id=WP_143585714.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1170068 1170199 . + . ID=gene-LDO09_RS12120;Name=LDO09_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12120;old_locus_tag=TthAA11_12370 NZ_AP024926.1 Protein Homology CDS 1170068 1170199 . + 0 ID=cds-WP_008632640.1;Parent=gene-LDO09_RS12120;Dbxref=Genbank:WP_008632640.1;Name=WP_008632640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632640.1;locus_tag=LDO09_RS12120;product=hypothetical protein;protein_id=WP_008632640.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1170231 1171457 . + . ID=gene-LDO09_RS06285;Name=LDO09_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06285;old_locus_tag=TthAA11_12380 NZ_AP024926.1 Protein Homology CDS 1170231 1171457 . + 0 ID=cds-WP_223968448.1;Parent=gene-LDO09_RS06285;Dbxref=Genbank:WP_223968448.1;Name=WP_223968448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112346.1;locus_tag=LDO09_RS06285;product=aminopeptidase;protein_id=WP_223968448.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1171515 1171997 . + . ID=gene-LDO09_RS06290;Name=LDO09_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06290;old_locus_tag=TthAA11_12390 NZ_AP024926.1 Protein Homology CDS 1171515 1171997 . + 0 ID=cds-WP_143585716.1;Parent=gene-LDO09_RS06290;Dbxref=Genbank:WP_143585716.1;Name=WP_143585716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013457226.1;locus_tag=LDO09_RS06290;product=cytochrome P460 family protein;protein_id=WP_143585716.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1171994 1172680 . - . ID=gene-LDO09_RS06295;Name=LDO09_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06295;old_locus_tag=TthAA11_12400 NZ_AP024926.1 Protein Homology CDS 1171994 1172680 . - 0 ID=cds-WP_172619192.1;Parent=gene-LDO09_RS06295;Dbxref=Genbank:WP_172619192.1;Name=WP_172619192.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012257.2;locus_tag=LDO09_RS06295;product=Crp/Fnr family transcriptional regulator;protein_id=WP_172619192.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1172815 1173171 . + . ID=gene-LDO09_RS06300;Name=LDO09_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06300;old_locus_tag=TthAA11_12410 NZ_AP024926.1 Protein Homology CDS 1172815 1173171 . + 0 ID=cds-WP_143585720.1;Parent=gene-LDO09_RS06300;Dbxref=Genbank:WP_143585720.1;Name=WP_143585720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013703111.1;locus_tag=LDO09_RS06300;product=DsrE family protein;protein_id=WP_143585720.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1173175 1173528 . - . ID=gene-LDO09_RS06305;Name=LDO09_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06305;old_locus_tag=TthAA11_12420 NZ_AP024926.1 Protein Homology CDS 1173175 1173528 . - 0 ID=cds-WP_223966751.1;Parent=gene-LDO09_RS06305;Dbxref=Genbank:WP_223966751.1;Name=WP_223966751.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01428.1;locus_tag=LDO09_RS06305;product=HAD-IA family hydrolase;protein_id=WP_223966751.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1173619 1174992 . - . ID=gene-LDO09_RS06310;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=LDO09_RS06310;old_locus_tag=TthAA11_12430 NZ_AP024926.1 Protein Homology CDS 1173619 1174992 . - 0 ID=cds-WP_143585723.1;Parent=gene-LDO09_RS06310;Dbxref=Genbank:WP_143585723.1;Name=WP_143585723.1;Ontology_term=GO:0016152;gbkey=CDS;gene=merA;go_function=mercury (II) reductase activity|0016152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629484.1;locus_tag=LDO09_RS06310;product=mercury(II) reductase;protein_id=WP_143585723.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1174989 1175111 . - . ID=gene-LDO09_RS12125;Name=LDO09_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12125;old_locus_tag=TthAA11_12440 NZ_AP024926.1 Protein Homology CDS 1174989 1175111 . - 0 ID=cds-WP_143585725.1;Parent=gene-LDO09_RS12125;Dbxref=Genbank:WP_143585725.1;Name=WP_143585725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632645.1;locus_tag=LDO09_RS12125;product=hypothetical protein;protein_id=WP_143585725.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1175121 1175549 . - . ID=gene-LDO09_RS06315;Name=LDO09_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06315;old_locus_tag=TthAA11_12450 NZ_AP024926.1 Protein Homology CDS 1175121 1175549 . - 0 ID=cds-WP_143585727.1;Parent=gene-LDO09_RS06315;Dbxref=Genbank:WP_143585727.1;Name=WP_143585727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632647.1;locus_tag=LDO09_RS06315;product=heavy metal-responsive transcriptional regulator;protein_id=WP_143585727.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1175550 1176788 . - . ID=gene-LDO09_RS06320;Name=LDO09_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06320;old_locus_tag=TthAA11_12460 NZ_AP024926.1 Protein Homology CDS 1175550 1176788 . - 0 ID=cds-WP_143585729.1;Parent=gene-LDO09_RS06320;Dbxref=Genbank:WP_143585729.1;Name=WP_143585729.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228474.1;locus_tag=LDO09_RS06320;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_143585729.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1176885 1177829 . + . ID=gene-LDO09_RS06325;Name=LDO09_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06325;old_locus_tag=TthAA11_12470 NZ_AP024926.1 Protein Homology CDS 1176885 1177829 . + 0 ID=cds-WP_143585731.1;Parent=gene-LDO09_RS06325;Dbxref=Genbank:WP_143585731.1;Name=WP_143585731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228475.1;locus_tag=LDO09_RS06325;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_143585731.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1177892 1179865 . + . ID=gene-LDO09_RS06330;Name=LDO09_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06330;old_locus_tag=TthAA11_12480 NZ_AP024926.1 Protein Homology CDS 1177892 1179865 . + 0 ID=cds-WP_143585733.1;Parent=gene-LDO09_RS06330;Dbxref=Genbank:WP_143585733.1;Name=WP_143585733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003047714.1;locus_tag=LDO09_RS06330;product=TRAP transporter permease;protein_id=WP_143585733.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1179881 1180606 . + . ID=gene-LDO09_RS06335;Name=LDO09_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06335;old_locus_tag=TthAA11_12490 NZ_AP024926.1 Protein Homology CDS 1179881 1180606 . + 0 ID=cds-WP_172619226.1;Parent=gene-LDO09_RS06335;Dbxref=Genbank:WP_172619226.1;Name=WP_172619226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857431.1;locus_tag=LDO09_RS06335;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_172619226.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1180613 1181029 . + . ID=gene-LDO09_RS06340;Name=LDO09_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06340;old_locus_tag=TthAA11_12500 NZ_AP024926.1 Protein Homology CDS 1180613 1181029 . + 0 ID=cds-WP_011173228.1;Parent=gene-LDO09_RS06340;Dbxref=Genbank:WP_011173228.1;Name=WP_011173228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173228.1;locus_tag=LDO09_RS06340;product=hypothetical protein;protein_id=WP_011173228.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1181004 1181831 . - . ID=gene-LDO09_RS06345;Name=LDO09_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06345;old_locus_tag=TthAA11_12510 NZ_AP024926.1 Protein Homology CDS 1181004 1181831 . - 0 ID=cds-WP_223968451.1;Parent=gene-LDO09_RS06345;Dbxref=Genbank:WP_223968451.1;Name=WP_223968451.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228479.1;locus_tag=LDO09_RS06345;product=patatin-like phospholipase family protein;protein_id=WP_223968451.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1181854 1182618 . + . ID=gene-LDO09_RS06350;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=LDO09_RS06350;old_locus_tag=TthAA11_12520 NZ_AP024926.1 Protein Homology CDS 1181854 1182618 . + 0 ID=cds-WP_223968453.1;Parent=gene-LDO09_RS06350;Dbxref=Genbank:WP_223968453.1;Name=WP_223968453.1;gbkey=CDS;gene=trpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173232.1;locus_tag=LDO09_RS06350;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_223968453.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1182623 1183330 . + . ID=gene-LDO09_RS06355;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=LDO09_RS06355;old_locus_tag=TthAA11_12530 NZ_AP024926.1 Protein Homology CDS 1182623 1183330 . + 0 ID=cds-WP_143585739.1;Parent=gene-LDO09_RS06355;Dbxref=Genbank:WP_143585739.1;Name=WP_143585739.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632660.1;locus_tag=LDO09_RS06355;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_143585739.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1183318 1183635 . + . ID=gene-LDO09_RS06360;Name=LDO09_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06360;old_locus_tag=TthAA11_12540 NZ_AP024926.1 Protein Homology CDS 1183318 1183635 . + 0 ID=cds-WP_011228484.1;Parent=gene-LDO09_RS06360;Dbxref=Genbank:WP_011228484.1;Name=WP_011228484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228484.1;locus_tag=LDO09_RS06360;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_011228484.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1183632 1185632 . + . ID=gene-LDO09_RS06365;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LDO09_RS06365;old_locus_tag=TthAA11_12550 NZ_AP024926.1 Protein Homology CDS 1183632 1185632 . + 0 ID=cds-WP_143585741.1;Parent=gene-LDO09_RS06365;Dbxref=Genbank:WP_143585741.1;Name=WP_143585741.1;gbkey=CDS;gene=recJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228485.1;locus_tag=LDO09_RS06365;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_143585741.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1185604 1186167 . + . ID=gene-LDO09_RS06370;Name=LDO09_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06370;old_locus_tag=TthAA11_12560 NZ_AP024926.1 Protein Homology CDS 1185604 1186167 . + 0 ID=cds-WP_143585743.1;Parent=gene-LDO09_RS06370;Dbxref=Genbank:WP_143585743.1;Name=WP_143585743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228486.1;locus_tag=LDO09_RS06370;product=hypothetical protein;protein_id=WP_143585743.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1186151 1188739 . - . ID=gene-LDO09_RS06375;Name=LDO09_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06375;old_locus_tag=TthAA11_12570 NZ_AP024926.1 Protein Homology CDS 1186151 1188739 . - 0 ID=cds-WP_223968455.1;Parent=gene-LDO09_RS06375;Dbxref=Genbank:WP_223968455.1;Name=WP_223968455.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462023.1;locus_tag=LDO09_RS06375;product=valine--tRNA ligase;protein_id=WP_223968455.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1188794 1189579 . - . ID=gene-LDO09_RS06380;Name=LDO09_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06380;old_locus_tag=TthAA11_12580 NZ_AP024926.1 Protein Homology CDS 1188794 1189579 . - 0 ID=cds-WP_011173238.1;Parent=gene-LDO09_RS06380;Dbxref=Genbank:WP_011173238.1;Name=WP_011173238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632665.1;locus_tag=LDO09_RS06380;product=amino acid ABC transporter permease;protein_id=WP_011173238.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1189645 1190409 . - . ID=gene-LDO09_RS06385;Name=LDO09_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06385;old_locus_tag=TthAA11_12590 NZ_AP024926.1 Protein Homology CDS 1189645 1190409 . - 0 ID=cds-WP_143585747.1;Parent=gene-LDO09_RS06385;Dbxref=Genbank:WP_143585747.1;Name=WP_143585747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329420.1;locus_tag=LDO09_RS06385;product=ABC transporter substrate-binding protein;protein_id=WP_143585747.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1190450 1192909 . - . ID=gene-LDO09_RS06390;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=LDO09_RS06390;old_locus_tag=TthAA11_12600 NZ_AP024926.1 Protein Homology CDS 1190450 1192909 . - 0 ID=cds-WP_143585750.1;Parent=gene-LDO09_RS06390;Dbxref=Genbank:WP_143585750.1;Name=WP_143585750.1;gbkey=CDS;gene=glgP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173240.1;locus_tag=LDO09_RS06390;product=alpha-glucan family phosphorylase;protein_id=WP_143585750.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1192924 1194396 . - . ID=gene-LDO09_RS06395;Name=LDO09_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06395;old_locus_tag=TthAA11_12610 NZ_AP024926.1 Protein Homology CDS 1192924 1194396 . - 0 ID=cds-WP_143585752.1;Parent=gene-LDO09_RS06395;Dbxref=Genbank:WP_143585752.1;Name=WP_143585752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629470.1;locus_tag=LDO09_RS06395;product=TrkH family potassium uptake protein;protein_id=WP_143585752.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1194365 1195705 . - . ID=gene-LDO09_RS06400;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=LDO09_RS06400;old_locus_tag=TthAA11_12620 NZ_AP024926.1 Protein Homology CDS 1194365 1195705 . - 0 ID=cds-WP_223968457.1;Parent=gene-LDO09_RS06400;Dbxref=Genbank:WP_223968457.1;Name=WP_223968457.1;gbkey=CDS;gene=trkA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510445.1;locus_tag=LDO09_RS06400;product=Trk system potassium transporter TrkA;protein_id=WP_223968457.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1195719 1197023 . - . ID=gene-LDO09_RS06405;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=LDO09_RS06405;old_locus_tag=TthAA11_12630 NZ_AP024926.1 Protein Homology CDS 1195719 1197023 . - 0 ID=cds-WP_165740117.1;Parent=gene-LDO09_RS06405;Dbxref=Genbank:WP_165740117.1;Name=WP_165740117.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173243.1;locus_tag=LDO09_RS06405;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_165740117.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1197064 1197921 . - . ID=gene-LDO09_RS06410;Name=LDO09_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06410;old_locus_tag=TthAA11_12640 NZ_AP024926.1 Protein Homology CDS 1197064 1197921 . - 0 ID=cds-WP_143585759.1;Parent=gene-LDO09_RS06410;Dbxref=Genbank:WP_143585759.1;Name=WP_143585759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173244.1;locus_tag=LDO09_RS06410;product=DUF4115 domain-containing protein;protein_id=WP_143585759.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1197926 1198771 . - . ID=gene-LDO09_RS06415;Name=LDO09_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06415;old_locus_tag=TthAA11_12650 NZ_AP024926.1 Protein Homology CDS 1197926 1198771 . - 0 ID=cds-WP_223968459.1;Parent=gene-LDO09_RS06415;Dbxref=Genbank:WP_223968459.1;Name=WP_223968459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173245.1;locus_tag=LDO09_RS06415;product=pseudouridine-5'-phosphate glycosidase;protein_id=WP_223968459.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1198779 1199531 . - . ID=gene-LDO09_RS06420;Name=LDO09_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06420;old_locus_tag=TthAA11_12660 NZ_AP024926.1 Protein Homology CDS 1198779 1199531 . - 0 ID=cds-WP_165739563.1;Parent=gene-LDO09_RS06420;Dbxref=Genbank:WP_165739563.1;Name=WP_165739563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631205.1;locus_tag=LDO09_RS06420;product=DUF4388 domain-containing protein;protein_id=WP_165739563.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1199507 1200295 . - . ID=gene-LDO09_RS06425;Name=LDO09_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06425;old_locus_tag=TthAA11_12670 NZ_AP024926.1 Protein Homology CDS 1199507 1200295 . - 0 ID=cds-WP_143585765.1;Parent=gene-LDO09_RS06425;Dbxref=Genbank:WP_143585765.1;Name=WP_143585765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228495.1;locus_tag=LDO09_RS06425;product=fructosamine kinase family protein;protein_id=WP_143585765.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1200258 1200743 . - . ID=gene-LDO09_RS06430;Name=LDO09_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06430;old_locus_tag=TthAA11_12680 NZ_AP024926.1 Protein Homology CDS 1200258 1200743 . - 0 ID=cds-WP_014629463.1;Parent=gene-LDO09_RS06430;Dbxref=Genbank:WP_014629463.1;Name=WP_014629463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629463.1;locus_tag=LDO09_RS06430;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_014629463.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1200805 1202352 . - . ID=gene-LDO09_RS06435;Name=LDO09_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06435;old_locus_tag=TthAA11_12690 NZ_AP024926.1 Protein Homology CDS 1200805 1202352 . - 0 ID=cds-WP_223968461.1;Parent=gene-LDO09_RS06435;Dbxref=Genbank:WP_223968461.1;Name=WP_223968461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551308.1;locus_tag=LDO09_RS06435;product=GAF domain-containing sensor histidine kinase;protein_id=WP_223968461.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1202339 1203073 . - . ID=gene-LDO09_RS06440;Name=LDO09_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06440;old_locus_tag=TthAA11_12700 NZ_AP024926.1 Protein Homology CDS 1202339 1203073 . - 0 ID=cds-WP_223968463.1;Parent=gene-LDO09_RS06440;Dbxref=Genbank:WP_223968463.1;Name=WP_223968463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173250.1;locus_tag=LDO09_RS06440;product=RNA methyltransferase;protein_id=WP_223968463.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1203084 1205171 . - . ID=gene-LDO09_RS06445;Name=LDO09_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06445;old_locus_tag=TthAA11_12710 NZ_AP024926.1 Protein Homology CDS 1203084 1205171 . - 0 ID=cds-WP_223969131.1;Parent=gene-LDO09_RS06445;Dbxref=Genbank:WP_223969131.1;Name=WP_223969131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228497.1;locus_tag=LDO09_RS06445;product=transglycosylase domain-containing protein;protein_id=WP_223969131.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1205188 1205547 . - . ID=gene-LDO09_RS06450;Name=LDO09_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06450;old_locus_tag=TthAA11_12720 NZ_AP024926.1 Protein Homology CDS 1205188 1205547 . - 0 ID=cds-WP_008631226.1;Parent=gene-LDO09_RS06450;Dbxref=Genbank:WP_008631226.1;Name=WP_008631226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631226.1;locus_tag=LDO09_RS06450;product=transcriptional regulator;protein_id=WP_008631226.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1205593 1205666 . - . ID=gene-LDO09_RS06455;Name=LDO09_RS06455;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS06455;old_locus_tag=TthAA11_t00330 NZ_AP024926.1 tRNAscan-SE tRNA 1205593 1205666 . - . ID=rna-LDO09_RS06455;Parent=gene-LDO09_RS06455;anticodon=(pos:complement(1205632..1205634));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS06455;product=tRNA-Gln NZ_AP024926.1 tRNAscan-SE exon 1205593 1205666 . - . ID=exon-LDO09_RS06455-1;Parent=rna-LDO09_RS06455;anticodon=(pos:complement(1205632..1205634));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS06455;product=tRNA-Gln NZ_AP024926.1 RefSeq gene 1205717 1206121 . - . ID=gene-LDO09_RS06460;Name=LDO09_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06460;old_locus_tag=TthAA11_12730 NZ_AP024926.1 Protein Homology CDS 1205717 1206121 . - 0 ID=cds-WP_223968465.1;Parent=gene-LDO09_RS06460;Dbxref=Genbank:WP_223968465.1;Name=WP_223968465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013703388.1;locus_tag=LDO09_RS06460;product=OsmC family protein;protein_id=WP_223968465.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1206142 1207248 . - . ID=gene-LDO09_RS06465;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LDO09_RS06465;old_locus_tag=TthAA11_12740 NZ_AP024926.1 Protein Homology CDS 1206142 1207248 . - 0 ID=cds-WP_143585775.1;Parent=gene-LDO09_RS06465;Dbxref=Genbank:WP_143585775.1;Name=WP_143585775.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629460.1;locus_tag=LDO09_RS06465;product=redox-regulated ATPase YchF;protein_id=WP_143585775.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1207323 1207985 . + . ID=gene-LDO09_RS06470;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=LDO09_RS06470;old_locus_tag=TthAA11_12750 NZ_AP024926.1 Protein Homology CDS 1207323 1207985 . + 0 ID=cds-WP_223968467.1;Parent=gene-LDO09_RS06470;Dbxref=Genbank:WP_223968467.1;Name=WP_223968467.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629459.1;locus_tag=LDO09_RS06470;product=deoxyribose-phosphate aldolase;protein_id=WP_223968467.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1207975 1209105 . + . ID=gene-LDO09_RS06475;Name=LDO09_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06475;old_locus_tag=TthAA11_12760 NZ_AP024926.1 Protein Homology CDS 1207975 1209105 . + 0 ID=cds-WP_223968469.1;Parent=gene-LDO09_RS06475;Dbxref=Genbank:WP_223968469.1;Name=WP_223968469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629458.1;locus_tag=LDO09_RS06475;product=phospholipase D-like domain-containing protein;protein_id=WP_223968469.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1209081 1209644 . + . ID=gene-LDO09_RS06480;Name=LDO09_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06480;old_locus_tag=TthAA11_12770 NZ_AP024926.1 Protein Homology CDS 1209081 1209644 . + 0 ID=cds-WP_143585781.1;Parent=gene-LDO09_RS06480;Dbxref=Genbank:WP_143585781.1;Name=WP_143585781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228501.1;locus_tag=LDO09_RS06480;product=Maf family protein;protein_id=WP_143585781.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1209641 1210429 . + . ID=gene-LDO09_RS06485;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LDO09_RS06485;old_locus_tag=TthAA11_12780 NZ_AP024926.1 Protein Homology CDS 1209641 1210429 . + 0 ID=cds-WP_143585783.1;Parent=gene-LDO09_RS06485;Dbxref=Genbank:WP_143585783.1;Name=WP_143585783.1;gbkey=CDS;gene=mreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173257.1;locus_tag=LDO09_RS06485;product=rod shape-determining protein MreC;protein_id=WP_143585783.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1210440 1210898 . + . ID=gene-LDO09_RS06490;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LDO09_RS06490;old_locus_tag=TthAA11_12790 NZ_AP024926.1 Protein Homology CDS 1210440 1210898 . + 0 ID=cds-WP_143585785.1;Parent=gene-LDO09_RS06490;Dbxref=Genbank:WP_143585785.1;Name=WP_143585785.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173258.1;locus_tag=LDO09_RS06490;product=rod shape-determining protein MreD;protein_id=WP_143585785.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1210895 1212622 . + . ID=gene-LDO09_RS06495;Name=LDO09_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06495;old_locus_tag=TthAA11_12800 NZ_AP024926.1 Protein Homology CDS 1210895 1212622 . + 0 ID=cds-WP_143585787.1;Parent=gene-LDO09_RS06495;Dbxref=Genbank:WP_143585787.1;Name=WP_143585787.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631245.1;locus_tag=LDO09_RS06495;product=penicillin-binding transpeptidase domain-containing protein;protein_id=WP_143585787.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1212668 1213504 . + . ID=gene-LDO09_RS06500;Name=LDO09_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06500;old_locus_tag=TthAA11_12810 NZ_AP024926.1 Protein Homology CDS 1212668 1213504 . + 0 ID=cds-WP_143584783.1-2;Parent=gene-LDO09_RS06500;Dbxref=Genbank:WP_143584783.1;Name=WP_143584783.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511377.1;locus_tag=LDO09_RS06500;product=IS982 family transposase;protein_id=WP_143584783.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1213527 1214066 . + . ID=gene-LDO09_RS06505;Name=LDO09_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06505;old_locus_tag=TthAA11_12820 NZ_AP024926.1 Protein Homology CDS 1213527 1214066 . + 0 ID=cds-WP_014629454.1;Parent=gene-LDO09_RS06505;Dbxref=Genbank:WP_014629454.1;Name=WP_014629454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228504.1;locus_tag=LDO09_RS06505;product=septum site-determining protein MinC;protein_id=WP_014629454.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1214186 1214623 . - . ID=gene-LDO09_RS06510;Name=LDO09_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06510;old_locus_tag=TthAA11_12830 NZ_AP024926.1 Protein Homology CDS 1214186 1214623 . - 0 ID=cds-WP_143585789.1;Parent=gene-LDO09_RS06510;Dbxref=Genbank:WP_143585789.1;Name=WP_143585789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173262.1;locus_tag=LDO09_RS06510;product=DUF420 domain-containing protein;protein_id=WP_143585789.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1214620 1214892 . - . ID=gene-LDO09_RS06515;Name=LDO09_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06515;old_locus_tag=TthAA11_12840 NZ_AP024926.1 Protein Homology CDS 1214620 1214892 . - 0 ID=cds-WP_011173263.1;Parent=gene-LDO09_RS06515;Dbxref=Genbank:WP_011173263.1;Name=WP_011173263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173263.1;locus_tag=LDO09_RS06515;product=hypothetical protein;protein_id=WP_011173263.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1214912 1215487 . - . ID=gene-LDO09_RS06520;Name=LDO09_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06520;old_locus_tag=TthAA11_12850 NZ_AP024926.1 Protein Homology CDS 1214912 1215487 . - 0 ID=cds-WP_143585793.1;Parent=gene-LDO09_RS06520;Dbxref=Genbank:WP_143585793.1;Name=WP_143585793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228505.1;locus_tag=LDO09_RS06520;product=hypothetical protein;protein_id=WP_143585793.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1215509 1215931 . - . ID=gene-LDO09_RS06525;Name=LDO09_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06525;old_locus_tag=TthAA11_12860 NZ_AP024926.1 GeneMarkS-2+ CDS 1215509 1215931 . - 0 ID=cds-WP_223965543.1;Parent=gene-LDO09_RS06525;Dbxref=Genbank:WP_223965543.1;Name=WP_223965543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS06525;product=hypothetical protein;protein_id=WP_223965543.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1215969 1217114 . - . ID=gene-LDO09_RS06530;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=LDO09_RS06530;old_locus_tag=TthAA11_12870 NZ_AP024926.1 Protein Homology CDS 1215969 1217114 . - 0 ID=cds-WP_143585795.1;Parent=gene-LDO09_RS06530;Dbxref=Genbank:WP_143585795.1;Name=WP_143585795.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=glutamate N-acetyltransferase activity|0004358||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173266.1;locus_tag=LDO09_RS06530;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_143585795.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1217105 1218142 . - . ID=gene-LDO09_RS06535;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LDO09_RS06535;old_locus_tag=TthAA11_12880 NZ_AP024926.1 Protein Homology CDS 1217105 1218142 . - 0 ID=cds-WP_143586961.1;Parent=gene-LDO09_RS06535;Dbxref=Genbank:WP_143586961.1;Name=WP_143586961.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173267.1;locus_tag=LDO09_RS06535;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_143586961.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1218145 1218666 . - . ID=gene-LDO09_RS06540;Name=LDO09_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06540;old_locus_tag=TthAA11_12890 NZ_AP024926.1 Protein Homology CDS 1218145 1218666 . - 0 ID=cds-WP_143585797.1;Parent=gene-LDO09_RS06540;Dbxref=Genbank:WP_143585797.1;Name=WP_143585797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112400.1;locus_tag=LDO09_RS06540;product=Uma2 family endonuclease;protein_id=WP_143585797.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1218671 1219576 . - . ID=gene-LDO09_RS06545;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=LDO09_RS06545;old_locus_tag=TthAA11_12900 NZ_AP024926.1 Protein Homology CDS 1218671 1219576 . - 0 ID=cds-WP_143585799.1;Parent=gene-LDO09_RS06545;Dbxref=Genbank:WP_143585799.1;Name=WP_143585799.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510458.1;locus_tag=LDO09_RS06545;product=ornithine carbamoyltransferase;protein_id=WP_143585799.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1219620 1220303 . - . ID=gene-LDO09_RS06550;Name=bshB1;gbkey=Gene;gene=bshB1;gene_biotype=protein_coding;locus_tag=LDO09_RS06550;old_locus_tag=TthAA11_12910 NZ_AP024926.1 Protein Homology CDS 1219620 1220303 . - 0 ID=cds-WP_143585801.1;Parent=gene-LDO09_RS06550;Dbxref=Genbank:WP_143585801.1;Name=WP_143585801.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB1;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018112198.1;locus_tag=LDO09_RS06550;product=bacillithiol biosynthesis deacetylase BshB1;protein_id=WP_143585801.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1220296 1220640 . - . ID=gene-LDO09_RS06555;Name=LDO09_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06555;old_locus_tag=TthAA11_12920 NZ_AP024926.1 Protein Homology CDS 1220296 1220640 . - 0 ID=cds-WP_143585803.1;Parent=gene-LDO09_RS06555;Dbxref=Genbank:WP_143585803.1;Name=WP_143585803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629445.1;locus_tag=LDO09_RS06555;product=DUF86 domain-containing protein;protein_id=WP_143585803.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1220630 1220920 . - . ID=gene-LDO09_RS06560;Name=LDO09_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06560;old_locus_tag=TthAA11_12930 NZ_AP024926.1 Protein Homology CDS 1220630 1220920 . - 0 ID=cds-WP_143585805.1;Parent=gene-LDO09_RS06560;Dbxref=Genbank:WP_143585805.1;Name=WP_143585805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631273.1;locus_tag=LDO09_RS06560;product=nucleotidyltransferase family protein;protein_id=WP_143585805.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1220930 1221529 . - . ID=gene-LDO09_RS06565;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=LDO09_RS06565;old_locus_tag=TthAA11_12940 NZ_AP024926.1 Protein Homology CDS 1220930 1221529 . - 0 ID=cds-WP_143585807.1;Parent=gene-LDO09_RS06565;Dbxref=Genbank:WP_143585807.1;Name=WP_143585807.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228511.1;locus_tag=LDO09_RS06565;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_143585807.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1221614 1222387 . - . ID=gene-LDO09_RS06570;Name=LDO09_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06570;old_locus_tag=TthAA11_12950 NZ_AP024926.1 Protein Homology CDS 1221614 1222387 . - 0 ID=cds-WP_143585809.1;Parent=gene-LDO09_RS06570;Dbxref=Genbank:WP_143585809.1;Name=WP_143585809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629438.1;locus_tag=LDO09_RS06570;product=ABC-2 family transporter protein;protein_id=WP_143585809.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1222414 1223409 . + . ID=gene-LDO09_RS06575;Name=LDO09_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06575;old_locus_tag=TthAA11_12960 NZ_AP024926.1 Protein Homology CDS 1222414 1223409 . + 0 ID=cds-WP_223969134.1;Parent=gene-LDO09_RS06575;Dbxref=Genbank:WP_223969134.1;Name=WP_223969134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228513.1;locus_tag=LDO09_RS06575;product=ATP-binding cassette domain-containing protein;protein_id=WP_223969134.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1223472 1224248 . + . ID=gene-LDO09_RS06580;Name=LDO09_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06580;old_locus_tag=TthAA11_12970 NZ_AP024926.1 Protein Homology CDS 1223472 1224248 . + 0 ID=cds-WP_143585812.1;Parent=gene-LDO09_RS06580;Dbxref=Genbank:WP_143585812.1;Name=WP_143585812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550058.1;locus_tag=LDO09_RS06580;product=ABC-2 family transporter protein;protein_id=WP_143585812.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1224256 1224801 . + . ID=gene-LDO09_RS06585;Name=LDO09_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06585;old_locus_tag=TthAA11_12980 NZ_AP024926.1 Protein Homology CDS 1224256 1224801 . + 0 ID=cds-WP_143585814.1;Parent=gene-LDO09_RS06585;Dbxref=Genbank:WP_143585814.1;Name=WP_143585814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629436.1;locus_tag=LDO09_RS06585;product=Uma2 family endonuclease;protein_id=WP_143585814.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1224782 1226356 . - . ID=gene-LDO09_RS06590;Name=cimA;gbkey=Gene;gene=cimA;gene_biotype=protein_coding;locus_tag=LDO09_RS06590;old_locus_tag=TthAA11_12990 NZ_AP024926.1 Protein Homology CDS 1224782 1226356 . - 0 ID=cds-WP_223968471.1;Parent=gene-LDO09_RS06590;Dbxref=Genbank:WP_223968471.1;Name=WP_223968471.1;Ontology_term=GO:0009097,GO:0043714;gbkey=CDS;gene=cimA;go_function=(R)-citramalate synthase activity|0043714||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510464.1;locus_tag=LDO09_RS06590;product=citramalate synthase;protein_id=WP_223968471.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1226350 1226868 . - . ID=gene-LDO09_RS06595;Name=LDO09_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06595;old_locus_tag=TthAA11_13000 NZ_AP024926.1 Protein Homology CDS 1226350 1226868 . - 0 ID=cds-WP_223965546.1;Parent=gene-LDO09_RS06595;Dbxref=Genbank:WP_223965546.1;Name=WP_223965546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510465.1;locus_tag=LDO09_RS06595;product=GNAT family N-acetyltransferase;protein_id=WP_223965546.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1226896 1228458 . - . ID=gene-LDO09_RS06600;Name=LDO09_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06600;old_locus_tag=TthAA11_13010 NZ_AP024926.1 Protein Homology CDS 1226896 1228458 . - 0 ID=cds-WP_223968473.1;Parent=gene-LDO09_RS06600;Dbxref=Genbank:WP_223968473.1;Name=WP_223968473.1;Ontology_term=GO:0009098,GO:0019752,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA,carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629434.1;locus_tag=LDO09_RS06600;product=2-isopropylmalate synthase;protein_id=WP_223968473.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1228516 1229529 . - . ID=gene-LDO09_RS06605;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LDO09_RS06605;old_locus_tag=TthAA11_13020 NZ_AP024926.1 Protein Homology CDS 1228516 1229529 . - 0 ID=cds-WP_223968476.1;Parent=gene-LDO09_RS06605;Dbxref=Genbank:WP_223968476.1;Name=WP_223968476.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510467.1;locus_tag=LDO09_RS06605;product=ketol-acid reductoisomerase;protein_id=WP_223968476.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1229526 1230038 . - . ID=gene-LDO09_RS06610;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=LDO09_RS06610;old_locus_tag=TthAA11_13030 NZ_AP024926.1 Protein Homology CDS 1229526 1230038 . - 0 ID=cds-WP_223965549.1;Parent=gene-LDO09_RS06610;Dbxref=Genbank:WP_223965549.1;Name=WP_223965549.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550053.1;locus_tag=LDO09_RS06610;product=acetolactate synthase small subunit;protein_id=WP_223965549.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1230035 1231723 . - . ID=gene-LDO09_RS06615;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=LDO09_RS06615;old_locus_tag=TthAA11_13040 NZ_AP024926.1 Protein Homology CDS 1230035 1231723 . - 0 ID=cds-WP_223965550.1;Parent=gene-LDO09_RS06615;Dbxref=Genbank:WP_223965550.1;Name=WP_223965550.1;Ontology_term=GO:0009097,GO:0009099,GO:0003984,GO:0005948;gbkey=CDS;gene=ilvB;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase activity|0003984||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631296.1;locus_tag=LDO09_RS06615;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_223965550.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1232236 1232925 . + . ID=gene-LDO09_RS06620;Name=LDO09_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06620;old_locus_tag=TthAA11_13060 NZ_AP024926.1 Protein Homology CDS 1232236 1232925 . + 0 ID=cds-WP_143584079.1-8;Parent=gene-LDO09_RS06620;Dbxref=Genbank:WP_143584079.1;Name=WP_143584079.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS06620;product=IS5-like element ISTth7 family transposase;protein_id=WP_143584079.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1232935 1233897 . - . ID=gene-LDO09_RS06625;Name=LDO09_RS06625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS06625;partial=true;pseudo=true;start_range=.,1232935 NZ_AP024926.1 Protein Homology CDS 1232935 1233897 . - 0 ID=cds-LDO09_RS06625;Parent=gene-LDO09_RS06625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006790,GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461695.1;locus_tag=LDO09_RS06625;partial=true;product=YpdA family putative bacillithiol disulfide reductase;pseudo=true;start_range=.,1232935;transl_table=11 NZ_AP024926.1 RefSeq gene 1234063 1234533 . + . ID=gene-LDO09_RS06630;Name=LDO09_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06630;old_locus_tag=TthAA11_13070 NZ_AP024926.1 Protein Homology CDS 1234063 1234533 . + 0 ID=cds-WP_143585821.1;Parent=gene-LDO09_RS06630;Dbxref=Genbank:WP_143585821.1;Name=WP_143585821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173283.1;locus_tag=LDO09_RS06630;product=GspH/FimT family protein;protein_id=WP_143585821.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1234589 1235062 . + . ID=gene-LDO09_RS06635;Name=LDO09_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06635;old_locus_tag=TthAA11_13080 NZ_AP024926.1 Protein Homology CDS 1234589 1235062 . + 0 ID=cds-WP_223965551.1;Parent=gene-LDO09_RS06635;Dbxref=Genbank:WP_223965551.1;Name=WP_223965551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629429.1;locus_tag=LDO09_RS06635;product=GspH/FimT family protein;protein_id=WP_223965551.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1235059 1235640 . + . ID=gene-LDO09_RS06640;Name=LDO09_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06640;old_locus_tag=TthAA11_13090 NZ_AP024926.1 Protein Homology CDS 1235059 1235640 . + 0 ID=cds-WP_223965552.1;Parent=gene-LDO09_RS06640;Dbxref=Genbank:WP_223965552.1;Name=WP_223965552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629428.1;locus_tag=LDO09_RS06640;product=type II secretion system protein;protein_id=WP_223965552.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1235637 1236338 . + . ID=gene-LDO09_RS06645;Name=LDO09_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06645;old_locus_tag=TthAA11_13100 NZ_AP024926.1 Protein Homology CDS 1235637 1236338 . + 0 ID=cds-WP_223965553.1;Parent=gene-LDO09_RS06645;Dbxref=Genbank:WP_223965553.1;Name=WP_223965553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629427.1;locus_tag=LDO09_RS06645;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_223965553.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1236349 1238025 . + . ID=gene-LDO09_RS06650;Name=LDO09_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06650;old_locus_tag=TthAA11_13110 NZ_AP024926.1 Protein Homology CDS 1236349 1238025 . + 0 ID=cds-WP_223965554.1;Parent=gene-LDO09_RS06650;Dbxref=Genbank:WP_223965554.1;Name=WP_223965554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173286.1;locus_tag=LDO09_RS06650;product=pilus assembly PilX N-terminal domain-containing protein;protein_id=WP_223965554.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1238243 1238707 . + . ID=gene-LDO09_RS06655;Name=LDO09_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06655;old_locus_tag=TthAA11_13120 NZ_AP024926.1 Protein Homology CDS 1238243 1238707 . + 0 ID=cds-WP_223968478.1;Parent=gene-LDO09_RS06655;Dbxref=Genbank:WP_223968478.1;Name=WP_223968478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510475.1;locus_tag=LDO09_RS06655;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_223968478.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1239036 1239416 . + . ID=gene-LDO09_RS06660;Name=LDO09_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06660;old_locus_tag=TthAA11_13130 NZ_AP024926.1 Protein Homology CDS 1239036 1239416 . + 0 ID=cds-WP_223968480.1;Parent=gene-LDO09_RS06660;Dbxref=Genbank:WP_223968480.1;Name=WP_223968480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631311.1;locus_tag=LDO09_RS06660;product=DUF1640 domain-containing protein;protein_id=WP_223968480.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1239492 1240034 . + . ID=gene-LDO09_RS06665;Name=LDO09_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06665;old_locus_tag=TthAA11_13140 NZ_AP024926.1 Protein Homology CDS 1239492 1240034 . + 0 ID=cds-WP_223968482.1;Parent=gene-LDO09_RS06665;Dbxref=Genbank:WP_223968482.1;Name=WP_223968482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173289.1;locus_tag=LDO09_RS06665;product=Uma2 family endonuclease;protein_id=WP_223968482.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1240057 1240356 . + . ID=gene-LDO09_RS06670;Name=LDO09_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06670;old_locus_tag=TthAA11_13150 NZ_AP024926.1 Protein Homology CDS 1240057 1240356 . + 0 ID=cds-WP_008631315.1;Parent=gene-LDO09_RS06670;Dbxref=Genbank:WP_008631315.1;Name=WP_008631315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631315.1;locus_tag=LDO09_RS06670;product=nucleotidyltransferase;protein_id=WP_008631315.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1240343 1240705 . + . ID=gene-LDO09_RS06675;Name=LDO09_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06675;old_locus_tag=TthAA11_13160 NZ_AP024926.1 Protein Homology CDS 1240343 1240705 . + 0 ID=cds-WP_060384345.1;Parent=gene-LDO09_RS06675;Dbxref=Genbank:WP_060384345.1;Name=WP_060384345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631318.1;locus_tag=LDO09_RS06675;product=DUF86 domain-containing protein;protein_id=WP_060384345.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1240739 1241296 . - . ID=gene-LDO09_RS06680;Name=LDO09_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06680;old_locus_tag=TthAA11_13170 NZ_AP024926.1 Protein Homology CDS 1240739 1241296 . - 0 ID=cds-WP_223968484.1;Parent=gene-LDO09_RS06680;Dbxref=Genbank:WP_223968484.1;Name=WP_223968484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173291.1;locus_tag=LDO09_RS06680;product=Uma2 family endonuclease;protein_id=WP_223968484.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1241315 1241971 . - . ID=gene-LDO09_RS06685;Name=LDO09_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06685;old_locus_tag=TthAA11_13180 NZ_AP024926.1 Protein Homology CDS 1241315 1241971 . - 0 ID=cds-WP_223968486.1;Parent=gene-LDO09_RS06685;Dbxref=Genbank:WP_223968486.1;Name=WP_223968486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228532.1;locus_tag=LDO09_RS06685;product=chromosome segregation protein ScpA;protein_id=WP_223968486.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1241968 1242981 . - . ID=gene-LDO09_RS06690;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LDO09_RS06690;old_locus_tag=TthAA11_13190 NZ_AP024926.1 Protein Homology CDS 1241968 1242981 . - 0 ID=cds-WP_223968488.1;Parent=gene-LDO09_RS06690;Dbxref=Genbank:WP_223968488.1;Name=WP_223968488.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461708.1;locus_tag=LDO09_RS06690;product=tryptophan--tRNA ligase;protein_id=WP_223968488.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1243026 1243112 . - . ID=gene-LDO09_RS06695;Name=LDO09_RS06695;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS06695;old_locus_tag=TthAA11_t00340 NZ_AP024926.1 tRNAscan-SE tRNA 1243026 1243112 . - . ID=rna-LDO09_RS06695;Parent=gene-LDO09_RS06695;anticodon=(pos:complement(1243076..1243078));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS06695;product=tRNA-Leu NZ_AP024926.1 tRNAscan-SE exon 1243026 1243112 . - . ID=exon-LDO09_RS06695-1;Parent=rna-LDO09_RS06695;anticodon=(pos:complement(1243076..1243078));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS06695;product=tRNA-Leu NZ_AP024926.1 RefSeq gene 1243306 1244724 . + . ID=gene-LDO09_RS06700;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LDO09_RS06700;old_locus_tag=TthAA11_13200 NZ_AP024926.1 Protein Homology CDS 1243306 1244724 . + 0 ID=cds-WP_143585849.1;Parent=gene-LDO09_RS06700;Dbxref=Genbank:WP_143585849.1;Name=WP_143585849.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173294.1;locus_tag=LDO09_RS06700;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_143585849.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1244738 1245343 . + . ID=gene-LDO09_RS06705;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LDO09_RS06705;old_locus_tag=TthAA11_13210 NZ_AP024926.1 Protein Homology CDS 1244738 1245343 . + 0 ID=cds-WP_223965558.1;Parent=gene-LDO09_RS06705;Dbxref=Genbank:WP_223965558.1;Name=WP_223965558.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631326.1;locus_tag=LDO09_RS06705;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_223965558.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1245340 1246377 . + . ID=gene-LDO09_RS06710;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LDO09_RS06710;old_locus_tag=TthAA11_13220 NZ_AP024926.1 Protein Homology CDS 1245340 1246377 . + 0 ID=cds-WP_011173296.1;Parent=gene-LDO09_RS06710;Dbxref=Genbank:WP_011173296.1;Name=WP_011173296.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461711.1;locus_tag=LDO09_RS06710;product=3-isopropylmalate dehydrogenase;protein_id=WP_011173296.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1246387 1246920 . + . ID=gene-LDO09_RS06715;Name=LDO09_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06715;old_locus_tag=TthAA11_13230 NZ_AP024926.1 Protein Homology CDS 1246387 1246920 . + 0 ID=cds-WP_014629412.1;Parent=gene-LDO09_RS06715;Dbxref=Genbank:WP_014629412.1;Name=WP_014629412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629412.1;locus_tag=LDO09_RS06715;product=Uma2 family endonuclease;protein_id=WP_014629412.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1246917 1247450 . + . ID=gene-LDO09_RS06720;Name=LDO09_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06720;old_locus_tag=TthAA11_13240 NZ_AP024926.1 Protein Homology CDS 1246917 1247450 . + 0 ID=cds-WP_223968490.1;Parent=gene-LDO09_RS06720;Dbxref=Genbank:WP_223968490.1;Name=WP_223968490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629411.1;locus_tag=LDO09_RS06720;product=Uma2 family endonuclease;protein_id=WP_223968490.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1247447 1248181 . + . ID=gene-LDO09_RS06725;Name=LDO09_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06725;old_locus_tag=TthAA11_13250 NZ_AP024926.1 Protein Homology CDS 1247447 1248181 . + 0 ID=cds-WP_223965559.1;Parent=gene-LDO09_RS06725;Dbxref=Genbank:WP_223965559.1;Name=WP_223965559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228537.1;locus_tag=LDO09_RS06725;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223965559.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1248178 1249845 . + . ID=gene-LDO09_RS06730;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LDO09_RS06730;old_locus_tag=TthAA11_13260 NZ_AP024926.1 Protein Homology CDS 1248178 1249845 . + 0 ID=cds-WP_223968492.1;Parent=gene-LDO09_RS06730;Dbxref=Genbank:WP_223968492.1;Name=WP_223968492.1;Ontology_term=GO:0009097,GO:0009099,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228538.1;locus_tag=LDO09_RS06730;product=dihydroxy-acid dehydratase;protein_id=WP_223968492.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1249842 1250228 . - . ID=gene-LDO09_RS06735;Name=LDO09_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06735;old_locus_tag=TthAA11_13270 NZ_AP024926.1 Protein Homology CDS 1249842 1250228 . - 0 ID=cds-WP_223965561.1;Parent=gene-LDO09_RS06735;Dbxref=Genbank:WP_223965561.1;Name=WP_223965561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228539.1;locus_tag=LDO09_RS06735;product=cytochrome c;protein_id=WP_223965561.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1250264 1251319 . - . ID=gene-LDO09_RS06740;Name=LDO09_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06740;old_locus_tag=TthAA11_13280 NZ_AP024926.1 Protein Homology CDS 1250264 1251319 . - 0 ID=cds-WP_143585864.1;Parent=gene-LDO09_RS06740;Dbxref=Genbank:WP_143585864.1;Name=WP_143585864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510485.1;locus_tag=LDO09_RS06740;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=WP_143585864.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1251316 1252095 . - . ID=gene-LDO09_RS06745;Name=LDO09_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06745;old_locus_tag=TthAA11_13290 NZ_AP024926.1 Protein Homology CDS 1251316 1252095 . - 0 ID=cds-WP_143585866.1;Parent=gene-LDO09_RS06745;Dbxref=Genbank:WP_143585866.1;Name=WP_143585866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228542.1;locus_tag=LDO09_RS06745;product=ABC transporter permease;protein_id=WP_143585866.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1252092 1252952 . - . ID=gene-LDO09_RS06750;Name=LDO09_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06750;old_locus_tag=TthAA11_13300 NZ_AP024926.1 Protein Homology CDS 1252092 1252952 . - 0 ID=cds-WP_143585867.1;Parent=gene-LDO09_RS06750;Dbxref=Genbank:WP_143585867.1;Name=WP_143585867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631334.1;locus_tag=LDO09_RS06750;product=ABC transporter permease;protein_id=WP_143585867.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1252945 1254009 . - . ID=gene-LDO09_RS06755;Name=LDO09_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06755;old_locus_tag=TthAA11_13310 NZ_AP024926.1 Protein Homology CDS 1252945 1254009 . - 0 ID=cds-WP_172619193.1;Parent=gene-LDO09_RS06755;Dbxref=Genbank:WP_172619193.1;Name=WP_172619193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629407.1;locus_tag=LDO09_RS06755;product=ABC transporter ATP-binding protein;protein_id=WP_172619193.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1254072 1255151 . - . ID=gene-LDO09_RS06760;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=LDO09_RS06760;old_locus_tag=TthAA11_13320 NZ_AP024926.1 Protein Homology CDS 1254072 1255151 . - 0 ID=cds-WP_143585869.1;Parent=gene-LDO09_RS06760;Dbxref=Genbank:WP_143585869.1;Name=WP_143585869.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629406.1;locus_tag=LDO09_RS06760;product=rod shape-determining protein RodA;protein_id=WP_143585869.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1255163 1255384 . - . ID=gene-LDO09_RS06765;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=LDO09_RS06765;old_locus_tag=TthAA11_13330 NZ_AP024926.1 Protein Homology CDS 1255163 1255384 . - 0 ID=cds-WP_014629405.1;Parent=gene-LDO09_RS06765;Dbxref=Genbank:WP_014629405.1;Name=WP_014629405.1;Ontology_term=GO:0000910,GO:0000918;gbkey=CDS;gene=minE;go_process=cytokinesis|0000910||IEA,division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629405.1;locus_tag=LDO09_RS06765;product=cell division topological specificity factor MinE;protein_id=WP_014629405.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1255384 1256187 . - . ID=gene-LDO09_RS06770;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LDO09_RS06770;old_locus_tag=TthAA11_13340 NZ_AP024926.1 Protein Homology CDS 1255384 1256187 . - 0 ID=cds-WP_011173307.1;Parent=gene-LDO09_RS06770;Dbxref=Genbank:WP_011173307.1;Name=WP_011173307.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111275.1;locus_tag=LDO09_RS06770;product=septum site-determining protein MinD;protein_id=WP_011173307.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1256184 1256489 . - . ID=gene-LDO09_RS06775;Name=LDO09_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06775;old_locus_tag=TthAA11_13350 NZ_AP024926.1 Protein Homology CDS 1256184 1256489 . - 0 ID=cds-WP_008631344.1;Parent=gene-LDO09_RS06775;Dbxref=Genbank:WP_008631344.1;Name=WP_008631344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629404.1;locus_tag=LDO09_RS06775;product=helix-turn-helix domain-containing protein;protein_id=WP_008631344.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1256571 1256708 . + . ID=gene-LDO09_RS06780;Name=LDO09_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06780;old_locus_tag=TthAA11_13360 NZ_AP024926.1 Protein Homology CDS 1256571 1256708 . + 0 ID=cds-WP_008631345.1;Parent=gene-LDO09_RS06780;Dbxref=Genbank:WP_008631345.1;Name=WP_008631345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631345.1;locus_tag=LDO09_RS06780;product=hypothetical protein;protein_id=WP_008631345.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1256718 1258262 . + . ID=gene-LDO09_RS06785;Name=LDO09_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06785;old_locus_tag=TthAA11_13370 NZ_AP024926.1 Protein Homology CDS 1256718 1258262 . + 0 ID=cds-WP_143585870.1;Parent=gene-LDO09_RS06785;Dbxref=Genbank:WP_143585870.1;Name=WP_143585870.1;Ontology_term=GO:0016866;gbkey=CDS;go_function=intramolecular transferase activity|0016866||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550000.1;locus_tag=LDO09_RS06785;product=methylmalonyl-CoA mutase family protein;protein_id=WP_143585870.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1258271 1258657 . + . ID=gene-LDO09_RS06790;Name=LDO09_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06790;old_locus_tag=TthAA11_13380 NZ_AP024926.1 Protein Homology CDS 1258271 1258657 . + 0 ID=cds-WP_024119945.1;Parent=gene-LDO09_RS06790;Dbxref=Genbank:WP_024119945.1;Name=WP_024119945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510490.1;locus_tag=LDO09_RS06790;product=nuclear transport factor 2 family protein;protein_id=WP_024119945.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1258692 1260638 . - . ID=gene-LDO09_RS06795;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=LDO09_RS06795;old_locus_tag=TthAA11_13390 NZ_AP024926.1 Protein Homology CDS 1258692 1260638 . - 0 ID=cds-WP_143585872.1;Parent=gene-LDO09_RS06795;Dbxref=Genbank:WP_143585872.1;Name=WP_143585872.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173311.1;locus_tag=LDO09_RS06795;product=acetate--CoA ligase;protein_id=WP_143585872.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1260771 1263308 . + . ID=gene-LDO09_RS06800;Name=LDO09_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06800;old_locus_tag=TthAA11_13400 NZ_AP024926.1 Protein Homology CDS 1260771 1263308 . + 0 ID=cds-WP_143585874.1;Parent=gene-LDO09_RS06800;Dbxref=Genbank:WP_143585874.1;Name=WP_143585874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173312.1;locus_tag=LDO09_RS06800;product=AMP-binding protein;protein_id=WP_143585874.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1263286 1265169 . + . ID=gene-LDO09_RS06805;Name=LDO09_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06805;old_locus_tag=TthAA11_13410 NZ_AP024926.1 Protein Homology CDS 1263286 1265169 . + 0 ID=cds-WP_223968494.1;Parent=gene-LDO09_RS06805;Dbxref=Genbank:WP_223968494.1;Name=WP_223968494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228547.1;locus_tag=LDO09_RS06805;product=acetate--CoA ligase;protein_id=WP_223968494.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1265233 1268226 . - . ID=gene-LDO09_RS06810;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LDO09_RS06810;old_locus_tag=TthAA11_13420 NZ_AP024926.1 Protein Homology CDS 1265233 1268226 . - 0 ID=cds-WP_143585878.1;Parent=gene-LDO09_RS06810;Dbxref=Genbank:WP_143585878.1;Name=WP_143585878.1;Ontology_term=GO:0043952,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173314.1;locus_tag=LDO09_RS06810;product=preprotein translocase subunit SecA;protein_id=WP_143585878.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1268368 1269339 . - . ID=gene-LDO09_RS06815;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LDO09_RS06815;old_locus_tag=TthAA11_13430 NZ_AP024926.1 Protein Homology CDS 1268368 1269339 . - 0 ID=cds-WP_223968495.1;Parent=gene-LDO09_RS06815;Dbxref=Genbank:WP_223968495.1;Name=WP_223968495.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629397.1;locus_tag=LDO09_RS06815;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_223968495.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1269375 1270691 . + . ID=gene-LDO09_RS06820;Name=LDO09_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06820;old_locus_tag=TthAA11_13440 NZ_AP024926.1 Protein Homology CDS 1269375 1270691 . + 0 ID=cds-WP_143585883.1;Parent=gene-LDO09_RS06820;Dbxref=Genbank:WP_143585883.1;Name=WP_143585883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228549.1;locus_tag=LDO09_RS06820;product=VWA domain-containing protein;protein_id=WP_143585883.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1270699 1271124 . + . ID=gene-LDO09_RS06825;Name=LDO09_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06825;old_locus_tag=TthAA11_13450 NZ_AP024926.1 Protein Homology CDS 1270699 1271124 . + 0 ID=cds-WP_011173317.1;Parent=gene-LDO09_RS06825;Dbxref=Genbank:WP_011173317.1;Name=WP_011173317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510496.1;locus_tag=LDO09_RS06825;product=DUF1999 family protein;protein_id=WP_011173317.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1271132 1271341 . + . ID=gene-LDO09_RS06830;Name=LDO09_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06830;old_locus_tag=TthAA11_13460 NZ_AP024926.1 Protein Homology CDS 1271132 1271341 . + 0 ID=cds-WP_008632685.1;Parent=gene-LDO09_RS06830;Dbxref=Genbank:WP_008632685.1;Name=WP_008632685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003044982.1;locus_tag=LDO09_RS06830;product=hypothetical protein;protein_id=WP_008632685.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1271338 1271661 . - . ID=gene-LDO09_RS06835;Name=LDO09_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06835;old_locus_tag=TthAA11_13470 NZ_AP024926.1 Protein Homology CDS 1271338 1271661 . - 0 ID=cds-WP_014629394.1;Parent=gene-LDO09_RS06835;Dbxref=Genbank:WP_014629394.1;Name=WP_014629394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632686.1;locus_tag=LDO09_RS06835;product=heavy metal-binding domain-containing protein;protein_id=WP_014629394.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1271679 1273865 . + . ID=gene-LDO09_RS06840;Name=LDO09_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06840;old_locus_tag=TthAA11_13480 NZ_AP024926.1 Protein Homology CDS 1271679 1273865 . + 0 ID=cds-WP_223965564.1;Parent=gene-LDO09_RS06840;Dbxref=Genbank:WP_223965564.1;Name=WP_223965564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510498.1;locus_tag=LDO09_RS06840;product=DUF1998 domain-containing protein;protein_id=WP_223965564.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1273871 1274272 . + . ID=gene-LDO09_RS06845;Name=LDO09_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06845;old_locus_tag=TthAA11_13490 NZ_AP024926.1 Protein Homology CDS 1273871 1274272 . + 0 ID=cds-WP_223965565.1;Parent=gene-LDO09_RS06845;Dbxref=Genbank:WP_223965565.1;Name=WP_223965565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173321.1;locus_tag=LDO09_RS06845;product=hypothetical protein;protein_id=WP_223965565.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1274269 1276884 . + . ID=gene-LDO09_RS06850;Name=LDO09_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06850;old_locus_tag=TthAA11_13500 NZ_AP024926.1 Protein Homology CDS 1274269 1276884 . + 0 ID=cds-WP_223968497.1;Parent=gene-LDO09_RS06850;Dbxref=Genbank:WP_223968497.1;Name=WP_223968497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228550.1;locus_tag=LDO09_RS06850;product=adenylate/guanylate cyclase domain-containing protein;protein_id=WP_223968497.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1276857 1278629 . + . ID=gene-LDO09_RS06855;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LDO09_RS06855;old_locus_tag=TthAA11_13510 NZ_AP024926.1 Protein Homology CDS 1276857 1278629 . + 0 ID=cds-WP_223968498.1;Parent=gene-LDO09_RS06855;Dbxref=Genbank:WP_223968498.1;Name=WP_223968498.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629389.1;locus_tag=LDO09_RS06855;product=DNA primase;protein_id=WP_223968498.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1278626 1280128 . - . ID=gene-LDO09_RS06860;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=LDO09_RS06860;old_locus_tag=TthAA11_13520 NZ_AP024926.1 Protein Homology CDS 1278626 1280128 . - 0 ID=cds-WP_223968500.1;Parent=gene-LDO09_RS06860;Dbxref=Genbank:WP_223968500.1;Name=WP_223968500.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024119702.1;locus_tag=LDO09_RS06860;product=4-alpha-glucanotransferase;protein_id=WP_223968500.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1280244 1280657 . - . ID=gene-LDO09_RS06865;Name=LDO09_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06865;old_locus_tag=TthAA11_13530 NZ_AP024926.1 GeneMarkS-2+ CDS 1280244 1280657 . - 0 ID=cds-WP_223968502.1;Parent=gene-LDO09_RS06865;Dbxref=Genbank:WP_223968502.1;Name=WP_223968502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS06865;product=ASCH domain-containing protein;protein_id=WP_223968502.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1280742 1281614 . - . ID=gene-LDO09_RS06870;Name=LDO09_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06870;old_locus_tag=TthAA11_13540 NZ_AP024926.1 Protein Homology CDS 1280742 1281614 . - 0 ID=cds-WP_223966757.1;Parent=gene-LDO09_RS06870;Dbxref=Genbank:WP_223966757.1;Name=WP_223966757.1;Ontology_term=GO:0006631;gbkey=CDS;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173325.1;locus_tag=LDO09_RS06870;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=WP_223966757.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1281635 1282489 . - . ID=gene-LDO09_RS06875;Name=LDO09_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06875;old_locus_tag=TthAA11_13550 NZ_AP024926.1 Protein Homology CDS 1281635 1282489 . - 0 ID=cds-WP_223968504.1;Parent=gene-LDO09_RS06875;Dbxref=Genbank:WP_223968504.1;Name=WP_223968504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173326.1;locus_tag=LDO09_RS06875;product=DMT family transporter;protein_id=WP_223968504.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1282479 1283699 . - . ID=gene-LDO09_RS06880;Name=LDO09_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06880;old_locus_tag=TthAA11_13560 NZ_AP024926.1 Protein Homology CDS 1282479 1283699 . - 0 ID=cds-WP_143585895.1;Parent=gene-LDO09_RS06880;Dbxref=Genbank:WP_143585895.1;Name=WP_143585895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173327.1;locus_tag=LDO09_RS06880;product=pitrilysin family protein;protein_id=WP_143585895.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1283692 1284903 . - . ID=gene-LDO09_RS06885;Name=LDO09_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06885;old_locus_tag=TthAA11_13570 NZ_AP024926.1 Protein Homology CDS 1283692 1284903 . - 0 ID=cds-WP_223968506.1;Parent=gene-LDO09_RS06885;Dbxref=Genbank:WP_223968506.1;Name=WP_223968506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228554.1;locus_tag=LDO09_RS06885;product=pitrilysin family protein;protein_id=WP_223968506.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1284919 1287231 . + . ID=gene-LDO09_RS06890;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LDO09_RS06890;old_locus_tag=TthAA11_13580 NZ_AP024926.1 Protein Homology CDS 1284919 1287231 . + 0 ID=cds-WP_143585899.1;Parent=gene-LDO09_RS06890;Dbxref=Genbank:WP_143585899.1;Name=WP_143585899.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173329.1;locus_tag=LDO09_RS06890;product=ATP-dependent DNA helicase RecG;protein_id=WP_143585899.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1287231 1288007 . + . ID=gene-LDO09_RS06895;Name=LDO09_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06895;old_locus_tag=TthAA11_13590 NZ_AP024926.1 Protein Homology CDS 1287231 1288007 . + 0 ID=cds-WP_223968509.1;Parent=gene-LDO09_RS06895;Dbxref=Genbank:WP_223968509.1;Name=WP_223968509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173330.1;locus_tag=LDO09_RS06895;product=hypothetical protein;protein_id=WP_223968509.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1287961 1288950 . - . ID=gene-LDO09_RS06900;Name=LDO09_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06900;old_locus_tag=TthAA11_13600 NZ_AP024926.1 Protein Homology CDS 1287961 1288950 . - 0 ID=cds-WP_223965571.1;Parent=gene-LDO09_RS06900;Dbxref=Genbank:WP_223965571.1;Name=WP_223965571.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632708.1;locus_tag=LDO09_RS06900;product=pectinacetylesterase family protein;protein_id=WP_223965571.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1289043 1289714 . - . ID=gene-LDO09_RS06905;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LDO09_RS06905;old_locus_tag=TthAA11_13610 NZ_AP024926.1 Protein Homology CDS 1289043 1289714 . - 0 ID=cds-WP_011173332.1;Parent=gene-LDO09_RS06905;Dbxref=Genbank:WP_011173332.1;Name=WP_011173332.1;gbkey=CDS;gene=atpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173332.1;locus_tag=LDO09_RS06905;product=V-type ATP synthase subunit D;protein_id=WP_011173332.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1289725 1291161 . - . ID=gene-LDO09_RS06910;Name=LDO09_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06910;old_locus_tag=TthAA11_13620 NZ_AP024926.1 Protein Homology CDS 1289725 1291161 . - 0 ID=cds-WP_011173333.1;Parent=gene-LDO09_RS06910;Dbxref=Genbank:WP_011173333.1;Name=WP_011173333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173333.1;locus_tag=LDO09_RS06910;product=V-type ATP synthase subunit B;protein_id=WP_011173333.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1291172 1292908 . - . ID=gene-LDO09_RS06915;Name=LDO09_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06915;old_locus_tag=TthAA11_13630 NZ_AP024926.1 Protein Homology CDS 1291172 1292908 . - 0 ID=cds-WP_143585903.1;Parent=gene-LDO09_RS06915;Dbxref=Genbank:WP_143585903.1;Name=WP_143585903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173334.1;locus_tag=LDO09_RS06915;product=V-type ATP synthase subunit A;protein_id=WP_143585903.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1292921 1293235 . - . ID=gene-LDO09_RS06920;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=LDO09_RS06920;old_locus_tag=TthAA11_13640 NZ_AP024926.1 Protein Homology CDS 1292921 1293235 . - 0 ID=cds-WP_011228561.1;Parent=gene-LDO09_RS06920;Dbxref=Genbank:WP_011228561.1;Name=WP_011228561.1;gbkey=CDS;gene=atpF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228561.1;locus_tag=LDO09_RS06920;product=V-type ATP synthase subunit F;protein_id=WP_011228561.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1293238 1294209 . - . ID=gene-LDO09_RS06925;Name=LDO09_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06925;old_locus_tag=TthAA11_13650 NZ_AP024926.1 Protein Homology CDS 1293238 1294209 . - 0 ID=cds-WP_223965573.1;Parent=gene-LDO09_RS06925;Dbxref=Genbank:WP_223965573.1;Name=WP_223965573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228562.1;locus_tag=LDO09_RS06925;product=V-type ATPase subunit;protein_id=WP_223965573.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1294213 1294779 . - . ID=gene-LDO09_RS06930;Name=LDO09_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06930;old_locus_tag=TthAA11_13660 NZ_AP024926.1 Protein Homology CDS 1294213 1294779 . - 0 ID=cds-WP_223968511.1;Parent=gene-LDO09_RS06930;Dbxref=Genbank:WP_223968511.1;Name=WP_223968511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173337.1;locus_tag=LDO09_RS06930;product=V-type ATP synthase subunit E;protein_id=WP_223968511.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1294839 1295138 . - . ID=gene-LDO09_RS06935;Name=LDO09_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06935;old_locus_tag=TthAA11_13670 NZ_AP024926.1 Protein Homology CDS 1294839 1295138 . - 0 ID=cds-WP_011173338.1;Parent=gene-LDO09_RS06935;Dbxref=Genbank:WP_011173338.1;Name=WP_011173338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629376.1;locus_tag=LDO09_RS06935;product=F0F1 ATP synthase subunit C;protein_id=WP_011173338.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1295153 1297111 . - . ID=gene-LDO09_RS06940;Name=LDO09_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06940;old_locus_tag=TthAA11_13680 NZ_AP024926.1 Protein Homology CDS 1295153 1297111 . - 0 ID=cds-WP_223968513.1;Parent=gene-LDO09_RS06940;Dbxref=Genbank:WP_223968513.1;Name=WP_223968513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629375.1;locus_tag=LDO09_RS06940;product=V-type ATP synthase subunit I;protein_id=WP_223968513.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1297108 1297422 . - . ID=gene-LDO09_RS06945;Name=LDO09_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06945;old_locus_tag=TthAA11_13690 NZ_AP024926.1 Protein Homology CDS 1297108 1297422 . - 0 ID=cds-WP_223968515.1;Parent=gene-LDO09_RS06945;Dbxref=Genbank:WP_223968515.1;Name=WP_223968515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046227.1;locus_tag=LDO09_RS06945;product=hypothetical protein;protein_id=WP_223968515.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1297525 1298673 . + . ID=gene-LDO09_RS06950;Name=LDO09_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06950;old_locus_tag=TthAA11_13700 NZ_AP024926.1 Protein Homology CDS 1297525 1298673 . + 0 ID=cds-WP_223968517.1;Parent=gene-LDO09_RS06950;Dbxref=Genbank:WP_223968517.1;Name=WP_223968517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173340.1;locus_tag=LDO09_RS06950;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_223968517.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1298683 1298892 . + . ID=gene-LDO09_RS06955;Name=LDO09_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06955;old_locus_tag=TthAA11_13710 NZ_AP024926.1 Protein Homology CDS 1298683 1298892 . + 0 ID=cds-WP_011173341.1;Parent=gene-LDO09_RS06955;Dbxref=Genbank:WP_011173341.1;Name=WP_011173341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173341.1;locus_tag=LDO09_RS06955;product=DUF3248 domain-containing protein;protein_id=WP_011173341.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1298889 1299242 . + . ID=gene-LDO09_RS06960;Name=LDO09_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06960;old_locus_tag=TthAA11_13720 NZ_AP024926.1 Protein Homology CDS 1298889 1299242 . + 0 ID=cds-WP_223968519.1;Parent=gene-LDO09_RS06960;Dbxref=Genbank:WP_223968519.1;Name=WP_223968519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173342.1;locus_tag=LDO09_RS06960;product=DUF3809 family protein;protein_id=WP_223968519.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1299270 1299944 . + . ID=gene-LDO09_RS06965;Name=LDO09_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06965;old_locus_tag=TthAA11_13730 NZ_AP024926.1 Protein Homology CDS 1299270 1299944 . + 0 ID=cds-WP_143585913.1;Parent=gene-LDO09_RS06965;Dbxref=Genbank:WP_143585913.1;Name=WP_143585913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173343.1;locus_tag=LDO09_RS06965;product=metal-dependent hydrolase;protein_id=WP_143585913.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1299964 1300539 . + . ID=gene-LDO09_RS06970;Name=LDO09_RS06970;end_range=1300539,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS06970;old_locus_tag=TthAA11_13740;partial=true;pseudo=true NZ_AP024926.1 Protein Homology CDS 1299964 1300539 . + 0 ID=cds-LDO09_RS06970;Parent=gene-LDO09_RS06970;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1300539,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632733.1;locus_tag=LDO09_RS06970;partial=true;product=serine/threonine-protein kinase;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 1300547 1302436 . + . ID=gene-LDO09_RS06975;Name=LDO09_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06975;old_locus_tag=TthAA11_13750 NZ_AP024926.1 Protein Homology CDS 1300547 1302436 . + 0 ID=cds-WP_143585917.1;Parent=gene-LDO09_RS06975;Dbxref=Genbank:WP_143585917.1;Name=WP_143585917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173345.1;locus_tag=LDO09_RS06975;product=AMP-binding protein;protein_id=WP_143585917.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1302414 1303907 . - . ID=gene-LDO09_RS06980;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LDO09_RS06980;old_locus_tag=TthAA11_13760 NZ_AP024926.1 Protein Homology CDS 1302414 1303907 . - 0 ID=cds-WP_223965578.1;Parent=gene-LDO09_RS06980;Dbxref=Genbank:WP_223965578.1;Name=WP_223965578.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173346.1;locus_tag=LDO09_RS06980;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_223965578.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1303900 1304928 . - . ID=gene-LDO09_RS06985;Name=LDO09_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06985;old_locus_tag=TthAA11_13770 NZ_AP024926.1 Protein Homology CDS 1303900 1304928 . - 0 ID=cds-WP_011173347.1;Parent=gene-LDO09_RS06985;Dbxref=Genbank:WP_011173347.1;Name=WP_011173347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173347.1;locus_tag=LDO09_RS06985;product=hypothetical protein;protein_id=WP_011173347.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1304944 1307844 . - . ID=gene-LDO09_RS06990;Name=LDO09_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06990;old_locus_tag=TthAA11_13780 NZ_AP024926.1 Protein Homology CDS 1304944 1307844 . - 0 ID=cds-WP_223968521.1;Parent=gene-LDO09_RS06990;Dbxref=Genbank:WP_223968521.1;Name=WP_223968521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228571.1;locus_tag=LDO09_RS06990;product=SMC family ATPase;protein_id=WP_223968521.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1307825 1308943 . - . ID=gene-LDO09_RS06995;Name=LDO09_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS06995;old_locus_tag=TthAA11_13790 NZ_AP024926.1 Protein Homology CDS 1307825 1308943 . - 0 ID=cds-WP_014510522.1;Parent=gene-LDO09_RS06995;Dbxref=Genbank:WP_014510522.1;Name=WP_014510522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510522.1;locus_tag=LDO09_RS06995;product=exonuclease SbcCD subunit D;protein_id=WP_014510522.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1308963 1309973 . - . ID=gene-LDO09_RS07000;Name=LDO09_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07000;old_locus_tag=TthAA11_13800 NZ_AP024926.1 Protein Homology CDS 1308963 1309973 . - 0 ID=cds-WP_143585927.1;Parent=gene-LDO09_RS07000;Dbxref=Genbank:WP_143585927.1;Name=WP_143585927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173350.1;locus_tag=LDO09_RS07000;product=YibE/F family protein;protein_id=WP_143585927.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1310032 1310400 . + . ID=gene-LDO09_RS07005;Name=LDO09_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07005;old_locus_tag=TthAA11_13810 NZ_AP024926.1 Protein Homology CDS 1310032 1310400 . + 0 ID=cds-WP_014510524.1;Parent=gene-LDO09_RS07005;Dbxref=Genbank:WP_014510524.1;Name=WP_014510524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510524.1;locus_tag=LDO09_RS07005;product=transcriptional repressor;protein_id=WP_014510524.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1310419 1310817 . - . ID=gene-LDO09_RS07010;Name=LDO09_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07010;old_locus_tag=TthAA11_13820 NZ_AP024926.1 Protein Homology CDS 1310419 1310817 . - 0 ID=cds-WP_008632741.1;Parent=gene-LDO09_RS07010;Dbxref=Genbank:WP_008632741.1;Name=WP_008632741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632741.1;locus_tag=LDO09_RS07010;product=DUF4258 domain-containing protein;protein_id=WP_008632741.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1310876 1311436 . - . ID=gene-LDO09_RS07015;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=LDO09_RS07015;old_locus_tag=TthAA11_13830 NZ_AP024926.1 Protein Homology CDS 1310876 1311436 . - 0 ID=cds-WP_096412451.1;Parent=gene-LDO09_RS07015;Dbxref=Genbank:WP_096412451.1;Name=WP_096412451.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515979.1;locus_tag=LDO09_RS07015;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_096412451.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1311433 1312161 . - . ID=gene-LDO09_RS07020;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=LDO09_RS07020;old_locus_tag=TthAA11_13840 NZ_AP024926.1 Protein Homology CDS 1311433 1312161 . - 0 ID=cds-WP_011173352.1;Parent=gene-LDO09_RS07020;Dbxref=Genbank:WP_011173352.1;Name=WP_011173352.1;Ontology_term=GO:0000910,GO:0006810,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA,transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632743.1;locus_tag=LDO09_RS07020;product=cell division ATP-binding protein FtsE;protein_id=WP_011173352.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1312227 1313546 . + . ID=gene-LDO09_RS07025;Name=LDO09_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07025;old_locus_tag=TthAA11_13850 NZ_AP024926.1 Protein Homology CDS 1312227 1313546 . + 0 ID=cds-WP_143585929.1;Parent=gene-LDO09_RS07025;Dbxref=Genbank:WP_143585929.1;Name=WP_143585929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173353.1;locus_tag=LDO09_RS07025;product=S41 family peptidase;protein_id=WP_143585929.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1313616 1315472 . - . ID=gene-LDO09_RS07030;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LDO09_RS07030;old_locus_tag=TthAA11_13860 NZ_AP024926.1 Protein Homology CDS 1313616 1315472 . - 0 ID=cds-WP_143585932.1;Parent=gene-LDO09_RS07030;Dbxref=Genbank:WP_143585932.1;Name=WP_143585932.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510528.1;locus_tag=LDO09_RS07030;product=methionine--tRNA ligase;protein_id=WP_143585932.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1315563 1316246 . - . ID=gene-LDO09_RS07035;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LDO09_RS07035;old_locus_tag=TthAA11_13870 NZ_AP024926.1 Protein Homology CDS 1315563 1316246 . - 0 ID=cds-WP_124104300.1;Parent=gene-LDO09_RS07035;Dbxref=Genbank:WP_124104300.1;Name=WP_124104300.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003044898.1;locus_tag=LDO09_RS07035;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_124104300.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1316246 1316722 . - . ID=gene-LDO09_RS07040;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=LDO09_RS07040;old_locus_tag=TthAA11_13880 NZ_AP024926.1 Protein Homology CDS 1316246 1316722 . - 0 ID=cds-WP_223968523.1;Parent=gene-LDO09_RS07040;Dbxref=Genbank:WP_223968523.1;Name=WP_223968523.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173357.1;locus_tag=LDO09_RS07040;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_223968523.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1316762 1317901 . - . ID=gene-LDO09_RS07045;Name=LDO09_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07045;old_locus_tag=TthAA11_13890 NZ_AP024926.1 Protein Homology CDS 1316762 1317901 . - 0 ID=cds-WP_223968526.1;Parent=gene-LDO09_RS07045;Dbxref=Genbank:WP_223968526.1;Name=WP_223968526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228579.1;locus_tag=LDO09_RS07045;product=BMP family ABC transporter substrate-binding protein;protein_id=WP_223968526.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1317904 1318737 . - . ID=gene-LDO09_RS07050;Name=LDO09_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07050;old_locus_tag=TthAA11_13900 NZ_AP024926.1 Protein Homology CDS 1317904 1318737 . - 0 ID=cds-WP_223968527.1;Parent=gene-LDO09_RS07050;Dbxref=Genbank:WP_223968527.1;Name=WP_223968527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461543.1;locus_tag=LDO09_RS07050;product=ABC transporter permease;protein_id=WP_223968527.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1318737 1319786 . - . ID=gene-LDO09_RS07055;Name=LDO09_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07055;old_locus_tag=TthAA11_13910 NZ_AP024926.1 Protein Homology CDS 1318737 1319786 . - 0 ID=cds-WP_143585938.1;Parent=gene-LDO09_RS07055;Dbxref=Genbank:WP_143585938.1;Name=WP_143585938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632752.1;locus_tag=LDO09_RS07055;product=ABC transporter permease;protein_id=WP_143585938.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1319783 1321252 . - . ID=gene-LDO09_RS07060;Name=LDO09_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07060;old_locus_tag=TthAA11_13920 NZ_AP024926.1 Protein Homology CDS 1319783 1321252 . - 0 ID=cds-WP_223968529.1;Parent=gene-LDO09_RS07060;Dbxref=Genbank:WP_223968529.1;Name=WP_223968529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173360.1;locus_tag=LDO09_RS07060;product=ABC transporter ATP-binding protein;protein_id=WP_223968529.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1321278 1321835 . - . ID=gene-LDO09_RS07065;Name=LDO09_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07065;old_locus_tag=TthAA11_13930 NZ_AP024926.1 Protein Homology CDS 1321278 1321835 . - 0 ID=cds-WP_143585942.1;Parent=gene-LDO09_RS07065;Dbxref=Genbank:WP_143585942.1;Name=WP_143585942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228583.1;locus_tag=LDO09_RS07065;product=molybdenum cofactor guanylyltransferase;protein_id=WP_143585942.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1321845 1322714 . - . ID=gene-LDO09_RS07070;Name=LDO09_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07070 NZ_AP024926.1 Protein Homology CDS 1321845 1322714 . - 0 ID=cds-WP_143585944.1;Parent=gene-LDO09_RS07070;Dbxref=Genbank:WP_143585944.1;Name=WP_143585944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173362.1;locus_tag=LDO09_RS07070;product=FAD-dependent oxidoreductase;protein_id=WP_143585944.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1322718 1323050 . - . ID=gene-LDO09_RS07075;Name=LDO09_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07075;old_locus_tag=TthAA11_13940 NZ_AP024926.1 Protein Homology CDS 1322718 1323050 . - 0 ID=cds-WP_143585946.1;Parent=gene-LDO09_RS07075;Dbxref=Genbank:WP_143585946.1;Name=WP_143585946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510532.1;locus_tag=LDO09_RS07075;product=hypothetical protein;protein_id=WP_143585946.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1323061 1324383 . - . ID=gene-LDO09_RS07080;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LDO09_RS07080;old_locus_tag=TthAA11_13950 NZ_AP024926.1 Protein Homology CDS 1323061 1324383 . - 0 ID=cds-WP_014629356.1;Parent=gene-LDO09_RS07080;Dbxref=Genbank:WP_014629356.1;Name=WP_014629356.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629356.1;locus_tag=LDO09_RS07080;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_014629356.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1324457 1324663 . + . ID=gene-LDO09_RS07085;Name=LDO09_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07085;old_locus_tag=TthAA11_13960 NZ_AP024926.1 Protein Homology CDS 1324457 1324663 . + 0 ID=cds-WP_008632762.1;Parent=gene-LDO09_RS07085;Dbxref=Genbank:WP_008632762.1;Name=WP_008632762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228586.1;locus_tag=LDO09_RS07085;product=CDGSH iron-sulfur domain-containing protein;protein_id=WP_008632762.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1324657 1325730 . - . ID=gene-LDO09_RS07090;Name=LDO09_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07090;old_locus_tag=TthAA11_13970 NZ_AP024926.1 Protein Homology CDS 1324657 1325730 . - 0 ID=cds-WP_143585948.1;Parent=gene-LDO09_RS07090;Dbxref=Genbank:WP_143585948.1;Name=WP_143585948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632764.1;locus_tag=LDO09_RS07090;product=radical SAM protein;protein_id=WP_143585948.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1325749 1326588 . + . ID=gene-LDO09_RS07095;Name=LDO09_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07095;old_locus_tag=TthAA11_13980 NZ_AP024926.1 Protein Homology CDS 1325749 1326588 . + 0 ID=cds-WP_143585950.1;Parent=gene-LDO09_RS07095;Dbxref=Genbank:WP_143585950.1;Name=WP_143585950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632766.1;locus_tag=LDO09_RS07095;product=phosphotransferase;protein_id=WP_143585950.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1326599 1327225 . + . ID=gene-LDO09_RS07100;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LDO09_RS07100;old_locus_tag=TthAA11_13990 NZ_AP024926.1 Protein Homology CDS 1326599 1327225 . + 0 ID=cds-WP_011173367.1;Parent=gene-LDO09_RS07100;Dbxref=Genbank:WP_011173367.1;Name=WP_011173367.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632767.1;locus_tag=LDO09_RS07100;product=uracil phosphoribosyltransferase;protein_id=WP_011173367.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1327212 1328312 . + . ID=gene-LDO09_RS07105;Name=LDO09_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07105;old_locus_tag=TthAA11_14000 NZ_AP024926.1 Protein Homology CDS 1327212 1328312 . + 0 ID=cds-WP_223968531.1;Parent=gene-LDO09_RS07105;Dbxref=Genbank:WP_223968531.1;Name=WP_223968531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629354.1;locus_tag=LDO09_RS07105;product=MraY family glycosyltransferase;protein_id=WP_223968531.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1328309 1329427 . + . ID=gene-LDO09_RS07110;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=LDO09_RS07110;old_locus_tag=TthAA11_14010 NZ_AP024926.1 Protein Homology CDS 1328309 1329427 . + 0 ID=cds-WP_223968533.1;Parent=gene-LDO09_RS07110;Dbxref=Genbank:WP_223968533.1;Name=WP_223968533.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111489.1;locus_tag=LDO09_RS07110;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_223968533.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1329402 1330601 . - . ID=gene-LDO09_RS07115;Name=LDO09_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07115;old_locus_tag=TthAA11_14020 NZ_AP024926.1 Protein Homology CDS 1329402 1330601 . - 0 ID=cds-WP_223968535.1;Parent=gene-LDO09_RS07115;Dbxref=Genbank:WP_223968535.1;Name=WP_223968535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629352.1;locus_tag=LDO09_RS07115;product=MFS transporter;protein_id=WP_223968535.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1330669 1331781 . + . ID=gene-LDO09_RS07120;Name=LDO09_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07120;old_locus_tag=TthAA11_14030 NZ_AP024926.1 Protein Homology CDS 1330669 1331781 . + 0 ID=cds-WP_223968537.1;Parent=gene-LDO09_RS07120;Dbxref=Genbank:WP_223968537.1;Name=WP_223968537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629351.1;locus_tag=LDO09_RS07120;product=site-2 protease family protein;protein_id=WP_223968537.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1331814 1332803 . + . ID=gene-LDO09_RS07125;Name=LDO09_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07125;old_locus_tag=TthAA11_14040 NZ_AP024926.1 Protein Homology CDS 1331814 1332803 . + 0 ID=cds-WP_143585960.1;Parent=gene-LDO09_RS07125;Dbxref=Genbank:WP_143585960.1;Name=WP_143585960.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510537.1;locus_tag=LDO09_RS07125;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_143585960.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1332869 1334992 . + . ID=gene-LDO09_RS07130;Name=LDO09_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07130;old_locus_tag=TthAA11_14050 NZ_AP024926.1 Protein Homology CDS 1332869 1334992 . + 0 ID=cds-WP_143585962.1;Parent=gene-LDO09_RS07130;Dbxref=Genbank:WP_143585962.1;Name=WP_143585962.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629349.1;locus_tag=LDO09_RS07130;product=TRAP transporter fused permease subunit;protein_id=WP_143585962.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1335045 1336028 . + . ID=gene-LDO09_RS07135;Name=LDO09_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07135;old_locus_tag=TthAA11_14060 NZ_AP024926.1 Protein Homology CDS 1335045 1336028 . + 0 ID=cds-WP_143585964.1;Parent=gene-LDO09_RS07135;Dbxref=Genbank:WP_143585964.1;Name=WP_143585964.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629348.1;locus_tag=LDO09_RS07135;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_143585964.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1336025 1336423 . + . ID=gene-LDO09_RS07140;Name=LDO09_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07140;old_locus_tag=TthAA11_14070 NZ_AP024926.1 Protein Homology CDS 1336025 1336423 . + 0 ID=cds-WP_143585966.1;Parent=gene-LDO09_RS07140;Dbxref=Genbank:WP_143585966.1;Name=WP_143585966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173375.1;locus_tag=LDO09_RS07140;product=hypothetical protein;protein_id=WP_143585966.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1336395 1336970 . - . ID=gene-LDO09_RS07145;Name=LDO09_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07145;old_locus_tag=TthAA11_14080 NZ_AP024926.1 Protein Homology CDS 1336395 1336970 . - 0 ID=cds-WP_143585968.1;Parent=gene-LDO09_RS07145;Dbxref=Genbank:WP_143585968.1;Name=WP_143585968.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173376.1;locus_tag=LDO09_RS07145;product=GNAT family N-acetyltransferase;protein_id=WP_143585968.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1336971 1338185 . - . ID=gene-LDO09_RS07150;Name=LDO09_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07150;old_locus_tag=TthAA11_14090 NZ_AP024926.1 Protein Homology CDS 1336971 1338185 . - 0 ID=cds-WP_143585970.1;Parent=gene-LDO09_RS07150;Dbxref=Genbank:WP_143585970.1;Name=WP_143585970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173377.1;locus_tag=LDO09_RS07150;product=trypsin-like peptidase domain-containing protein;protein_id=WP_143585970.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1338232 1339089 . - . ID=gene-LDO09_RS07155;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LDO09_RS07155;old_locus_tag=TthAA11_14100 NZ_AP024926.1 Protein Homology CDS 1338232 1339089 . - 0 ID=cds-WP_223965583.1;Parent=gene-LDO09_RS07155;Dbxref=Genbank:WP_223965583.1;Name=WP_223965583.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228594.1;locus_tag=LDO09_RS07155;product=formyltetrahydrofolate deformylase;protein_id=WP_223965583.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1339108 1339602 . + . ID=gene-LDO09_RS07160;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=LDO09_RS07160;old_locus_tag=TthAA11_14110 NZ_AP024926.1 Protein Homology CDS 1339108 1339602 . + 0 ID=cds-WP_143585974.1;Parent=gene-LDO09_RS07160;Dbxref=Genbank:WP_143585974.1;Name=WP_143585974.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510543.1;locus_tag=LDO09_RS07160;product=ribonuclease E activity regulator RraA;protein_id=WP_143585974.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1339496 1341133 . - . ID=gene-LDO09_RS07165;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LDO09_RS07165;old_locus_tag=TthAA11_14120 NZ_AP024926.1 Protein Homology CDS 1339496 1341133 . - 0 ID=cds-WP_143585976.1;Parent=gene-LDO09_RS07165;Dbxref=Genbank:WP_143585976.1;Name=WP_143585976.1;Ontology_term=GO:0006298,GO:0016887;gbkey=CDS;gene=mutL;go_function=ATP hydrolysis activity|0016887||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228596.1;locus_tag=LDO09_RS07165;product=DNA mismatch repair endonuclease MutL;protein_id=WP_143585976.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1341130 1343565 . - . ID=gene-LDO09_RS07170;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LDO09_RS07170;old_locus_tag=TthAA11_14130 NZ_AP024926.1 Protein Homology CDS 1341130 1343565 . - 0 ID=cds-WP_172619228.1;Parent=gene-LDO09_RS07170;Dbxref=Genbank:WP_172619228.1;Name=WP_172619228.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510545.1;locus_tag=LDO09_RS07170;product=DNA mismatch repair protein MutS;protein_id=WP_172619228.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1343710 1344990 . + . ID=gene-LDO09_RS07175;Name=LDO09_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07175;old_locus_tag=TthAA11_14140 NZ_AP024926.1 Protein Homology CDS 1343710 1344990 . + 0 ID=cds-WP_143585980.1;Parent=gene-LDO09_RS07175;Dbxref=Genbank:WP_143585980.1;Name=WP_143585980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013159161.1;locus_tag=LDO09_RS07175;product=molybdopterin-dependent oxidoreductase;protein_id=WP_143585980.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1345004 1345408 . + . ID=gene-LDO09_RS07180;Name=LDO09_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07180;old_locus_tag=TthAA11_14150 NZ_AP024926.1 Protein Homology CDS 1345004 1345408 . + 0 ID=cds-WP_143585982.1;Parent=gene-LDO09_RS07180;Dbxref=Genbank:WP_143585982.1;Name=WP_143585982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018465348.1;locus_tag=LDO09_RS07180;product=sulfide dehydrogenase;protein_id=WP_143585982.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1345405 1345845 . + . ID=gene-LDO09_RS07185;Name=LDO09_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07185;old_locus_tag=TthAA11_14160 NZ_AP024926.1 Protein Homology CDS 1345405 1345845 . + 0 ID=cds-WP_143585984.1;Parent=gene-LDO09_RS07185;Dbxref=Genbank:WP_143585984.1;Name=WP_143585984.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228600.1;locus_tag=LDO09_RS07185;product=MOSC domain-containing protein;protein_id=WP_143585984.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1345974 1347632 . - . ID=gene-LDO09_RS07190;Name=LDO09_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07190;old_locus_tag=TthAA11_14170 NZ_AP024926.1 Protein Homology CDS 1345974 1347632 . - 0 ID=cds-WP_223968539.1;Parent=gene-LDO09_RS07190;Dbxref=Genbank:WP_223968539.1;Name=WP_223968539.1;Ontology_term=GO:0009166,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629337.1;locus_tag=LDO09_RS07190;product=5'-nucleotidase C-terminal domain-containing protein;protein_id=WP_223968539.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1347813 1349153 . + . ID=gene-LDO09_RS07195;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LDO09_RS07195;old_locus_tag=TthAA11_14180 NZ_AP024926.1 Protein Homology CDS 1347813 1349153 . + 0 ID=cds-WP_223968541.1;Parent=gene-LDO09_RS07195;Dbxref=Genbank:WP_223968541.1;Name=WP_223968541.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048009.1;locus_tag=LDO09_RS07195;product=type I glutamate--ammonia ligase;protein_id=WP_223968541.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1349292 1350455 . + . ID=gene-LDO09_RS07200;Name=LDO09_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07200;old_locus_tag=TthAA11_14190 NZ_AP024926.1 Protein Homology CDS 1349292 1350455 . + 0 ID=cds-WP_223968543.1;Parent=gene-LDO09_RS07200;Dbxref=Genbank:WP_223968543.1;Name=WP_223968543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629335.1;locus_tag=LDO09_RS07200;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_223968543.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1350530 1351498 . + . ID=gene-LDO09_RS07205;Name=LDO09_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07205;old_locus_tag=TthAA11_14200 NZ_AP024926.1 Protein Homology CDS 1350530 1351498 . + 0 ID=cds-WP_223968545.1;Parent=gene-LDO09_RS07205;Dbxref=Genbank:WP_223968545.1;Name=WP_223968545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632793.1;locus_tag=LDO09_RS07205;product=branched-chain amino acid ABC transporter permease;protein_id=WP_223968545.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1351495 1352826 . + . ID=gene-LDO09_RS07210;Name=LDO09_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07210;old_locus_tag=TthAA11_14210 NZ_AP024926.1 Protein Homology CDS 1351495 1352826 . + 0 ID=cds-WP_223968547.1;Parent=gene-LDO09_RS07210;Dbxref=Genbank:WP_223968547.1;Name=WP_223968547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510552.1;locus_tag=LDO09_RS07210;product=branched-chain amino acid ABC transporter permease;protein_id=WP_223968547.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1352823 1353602 . + . ID=gene-LDO09_RS07215;Name=LDO09_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07215;old_locus_tag=TthAA11_14220 NZ_AP024926.1 Protein Homology CDS 1352823 1353602 . + 0 ID=cds-WP_223965588.1;Parent=gene-LDO09_RS07215;Dbxref=Genbank:WP_223965588.1;Name=WP_223965588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003044483.1;locus_tag=LDO09_RS07215;product=ABC transporter ATP-binding protein;protein_id=WP_223965588.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1353599 1354312 . + . ID=gene-LDO09_RS07220;Name=LDO09_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07220;old_locus_tag=TthAA11_14230 NZ_AP024926.1 Protein Homology CDS 1353599 1354312 . + 0 ID=cds-WP_014629331.1;Parent=gene-LDO09_RS07220;Dbxref=Genbank:WP_014629331.1;Name=WP_014629331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111468.1;locus_tag=LDO09_RS07220;product=ABC transporter ATP-binding protein;protein_id=WP_014629331.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1354404 1355981 . + . ID=gene-LDO09_RS07225;Name=LDO09_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07225;old_locus_tag=TthAA11_14240 NZ_AP024926.1 Protein Homology CDS 1354404 1355981 . + 0 ID=cds-WP_143585999.1;Parent=gene-LDO09_RS07225;Dbxref=Genbank:WP_143585999.1;Name=WP_143585999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510554.1;locus_tag=LDO09_RS07225;product=ABC transporter substrate-binding protein;protein_id=WP_143585999.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1356036 1357046 . + . ID=gene-LDO09_RS07230;Name=LDO09_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07230;old_locus_tag=TthAA11_14250 NZ_AP024926.1 Protein Homology CDS 1356036 1357046 . + 0 ID=cds-WP_014510555.1;Parent=gene-LDO09_RS07230;Dbxref=Genbank:WP_014510555.1;Name=WP_014510555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716417.1;locus_tag=LDO09_RS07230;product=ABC transporter permease;protein_id=WP_014510555.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1357050 1357898 . + . ID=gene-LDO09_RS07235;Name=LDO09_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07235;old_locus_tag=TthAA11_14260 NZ_AP024926.1 Protein Homology CDS 1357050 1357898 . + 0 ID=cds-WP_014629329.1;Parent=gene-LDO09_RS07235;Dbxref=Genbank:WP_014629329.1;Name=WP_014629329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173394.1;locus_tag=LDO09_RS07235;product=ABC transporter permease;protein_id=WP_014629329.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1357945 1358988 . + . ID=gene-LDO09_RS07240;Name=LDO09_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07240;old_locus_tag=TthAA11_14270 NZ_AP024926.1 Protein Homology CDS 1357945 1358988 . + 0 ID=cds-WP_223965589.1;Parent=gene-LDO09_RS07240;Dbxref=Genbank:WP_223965589.1;Name=WP_223965589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629328.1;locus_tag=LDO09_RS07240;product=protease complex subunit PrcB family protein;protein_id=WP_223965589.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1358956 1360128 . - . ID=gene-LDO09_RS07245;Name=LDO09_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07245;old_locus_tag=TthAA11_14280 NZ_AP024926.1 Protein Homology CDS 1358956 1360128 . - 0 ID=cds-WP_223965590.1;Parent=gene-LDO09_RS07245;Dbxref=Genbank:WP_223965590.1;Name=WP_223965590.1;Ontology_term=GO:0009058,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173396.1;locus_tag=LDO09_RS07245;product=Mur ligase family protein;protein_id=WP_223965590.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1360129 1361931 . - . ID=gene-LDO09_RS07250;Name=LDO09_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07250;old_locus_tag=TthAA11_14290 NZ_AP024926.1 Protein Homology CDS 1360129 1361931 . - 0 ID=cds-WP_223968549.1;Parent=gene-LDO09_RS07250;Dbxref=Genbank:WP_223968549.1;Name=WP_223968549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228612.1;locus_tag=LDO09_RS07250;product=ABC transporter ATP-binding protein;protein_id=WP_223968549.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1361928 1363664 . - . ID=gene-LDO09_RS07255;Name=LDO09_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07255;old_locus_tag=TthAA11_14300 NZ_AP024926.1 Protein Homology CDS 1361928 1363664 . - 0 ID=cds-WP_223968551.1;Parent=gene-LDO09_RS07255;Dbxref=Genbank:WP_223968551.1;Name=WP_223968551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173398.1;locus_tag=LDO09_RS07255;product=ABC transporter ATP-binding protein;protein_id=WP_223968551.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1363725 1364858 . - . ID=gene-LDO09_RS07260;Name=LDO09_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07260;old_locus_tag=TthAA11_14310 NZ_AP024926.1 Protein Homology CDS 1363725 1364858 . - 0 ID=cds-WP_223968553.1;Parent=gene-LDO09_RS07260;Dbxref=Genbank:WP_223968553.1;Name=WP_223968553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510561.1;locus_tag=LDO09_RS07260;product=citrate synthase/methylcitrate synthase;protein_id=WP_223968553.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1364931 1365746 . - . ID=gene-LDO09_RS07265;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=LDO09_RS07265;old_locus_tag=TthAA11_14320 NZ_AP024926.1 Protein Homology CDS 1364931 1365746 . - 0 ID=cds-WP_223968555.1;Parent=gene-LDO09_RS07265;Dbxref=Genbank:WP_223968555.1;Name=WP_223968555.1;Ontology_term=GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510562.1;locus_tag=LDO09_RS07265;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_223968555.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1365906 1366670 . - . ID=gene-LDO09_RS07270;Name=LDO09_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07270;old_locus_tag=TthAA11_14330 NZ_AP024926.1 Protein Homology CDS 1365906 1366670 . - 0 ID=cds-WP_223968557.1;Parent=gene-LDO09_RS07270;Dbxref=Genbank:WP_223968557.1;Name=WP_223968557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228616.1;locus_tag=LDO09_RS07270;product=class I mannose-6-phosphate isomerase;protein_id=WP_223968557.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1366689 1367561 . + . ID=gene-LDO09_RS07275;Name=LDO09_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07275;old_locus_tag=TthAA11_14340 NZ_AP024926.1 Protein Homology CDS 1366689 1367561 . + 0 ID=cds-WP_011173402.1;Parent=gene-LDO09_RS07275;Dbxref=Genbank:WP_011173402.1;Name=WP_011173402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629321.1;locus_tag=LDO09_RS07275;product=bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase;protein_id=WP_011173402.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1367565 1368245 . + . ID=gene-LDO09_RS07280;Name=LDO09_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07280;old_locus_tag=TthAA11_14350 NZ_AP024926.1 Protein Homology CDS 1367565 1368245 . + 0 ID=cds-WP_223968559.1;Parent=gene-LDO09_RS07280;Dbxref=Genbank:WP_223968559.1;Name=WP_223968559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173403.1;locus_tag=LDO09_RS07280;product=endonuclease V;protein_id=WP_223968559.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1368251 1368892 . + . ID=gene-LDO09_RS07285;Name=LDO09_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07285;old_locus_tag=TthAA11_14360 NZ_AP024926.1 Protein Homology CDS 1368251 1368892 . + 0 ID=cds-WP_124104265.1;Parent=gene-LDO09_RS07285;Dbxref=Genbank:WP_124104265.1;Name=WP_124104265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632815.1;locus_tag=LDO09_RS07285;product=lysophospholipid acyltransferase family protein;protein_id=WP_124104265.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1369009 1369302 . + . ID=gene-LDO09_RS07290;Name=LDO09_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07290;old_locus_tag=TthAA11_14370 NZ_AP024926.1 Protein Homology CDS 1369009 1369302 . + 0 ID=cds-WP_124104264.1;Parent=gene-LDO09_RS07290;Dbxref=Genbank:WP_124104264.1;Name=WP_124104264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328755.1;locus_tag=LDO09_RS07290;product=HU family DNA-binding protein;protein_id=WP_124104264.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1369326 1370168 . - . ID=gene-LDO09_RS07295;Name=LDO09_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07295;old_locus_tag=TthAA11_14380 NZ_AP024926.1 Protein Homology CDS 1369326 1370168 . - 0 ID=cds-WP_143586018.1;Parent=gene-LDO09_RS07295;Dbxref=Genbank:WP_143586018.1;Name=WP_143586018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632817.1;locus_tag=LDO09_RS07295;product=hypothetical protein;protein_id=WP_143586018.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1370175 1371173 . - . ID=gene-LDO09_RS07300;Name=LDO09_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07300;old_locus_tag=TthAA11_14390 NZ_AP024926.1 Protein Homology CDS 1370175 1371173 . - 0 ID=cds-WP_143586020.1;Parent=gene-LDO09_RS07300;Dbxref=Genbank:WP_143586020.1;Name=WP_143586020.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632818.1;locus_tag=LDO09_RS07300;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_143586020.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1371170 1371817 . - . ID=gene-LDO09_RS07305;Name=LDO09_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07305;old_locus_tag=TthAA11_14400 NZ_AP024926.1 Protein Homology CDS 1371170 1371817 . - 0 ID=cds-WP_008632821.1;Parent=gene-LDO09_RS07305;Dbxref=Genbank:WP_008632821.1;Name=WP_008632821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632821.1;locus_tag=LDO09_RS07305;product=response regulator transcription factor;protein_id=WP_008632821.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1371855 1373075 . + . ID=gene-LDO09_RS07310;Name=LDO09_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07310;old_locus_tag=TthAA11_14410 NZ_AP024926.1 Protein Homology CDS 1371855 1373075 . + 0 ID=cds-WP_223968561.1;Parent=gene-LDO09_RS07310;Dbxref=Genbank:WP_223968561.1;Name=WP_223968561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173408.1;locus_tag=LDO09_RS07310;product=RsmD family RNA methyltransferase;protein_id=WP_223968561.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1373112 1373561 . + . ID=gene-LDO09_RS07315;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LDO09_RS07315;old_locus_tag=TthAA11_14420 NZ_AP024926.1 Protein Homology CDS 1373112 1373561 . + 0 ID=cds-WP_223968563.1;Parent=gene-LDO09_RS07315;Dbxref=Genbank:WP_223968563.1;Name=WP_223968563.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173409.1;locus_tag=LDO09_RS07315;product=type II 3-dehydroquinate dehydratase;protein_id=WP_223968563.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1373637 1376054 . + . ID=gene-LDO09_RS07320;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LDO09_RS07320;old_locus_tag=TthAA11_14430 NZ_AP024926.1 Protein Homology CDS 1373637 1376054 . + 0 ID=cds-WP_223968565.1;Parent=gene-LDO09_RS07320;Dbxref=Genbank:WP_223968565.1;Name=WP_223968565.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111454.1;locus_tag=LDO09_RS07320;product=DNA gyrase subunit A;protein_id=WP_223968565.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1376054 1376365 . + . ID=gene-LDO09_RS07325;Name=LDO09_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07325;old_locus_tag=TthAA11_14440 NZ_AP024926.1 Protein Homology CDS 1376054 1376365 . + 0 ID=cds-WP_143586028.1;Parent=gene-LDO09_RS07325;Dbxref=Genbank:WP_143586028.1;Name=WP_143586028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173411.1;locus_tag=LDO09_RS07325;product=divalent-cation tolerance protein CutA;protein_id=WP_143586028.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1376584 1377192 . + . ID=gene-LDO09_RS07330;Name=sdrP;gbkey=Gene;gene=sdrP;gene_biotype=protein_coding;locus_tag=LDO09_RS07330;old_locus_tag=TthAA11_14450 NZ_AP024926.1 Protein Homology CDS 1376584 1377192 . + 0 ID=cds-WP_124104260.1;Parent=gene-LDO09_RS07330;Dbxref=Genbank:WP_124104260.1;Name=WP_124104260.1;gbkey=CDS;gene=sdrP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173413.1;locus_tag=LDO09_RS07330;product=Crp/Fnr family transcriptional regulator SdrP;protein_id=WP_124104260.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1377218 1377865 . + . ID=gene-LDO09_RS07335;Name=LDO09_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07335;old_locus_tag=TthAA11_14460 NZ_AP024926.1 Protein Homology CDS 1377218 1377865 . + 0 ID=cds-WP_008632834.1;Parent=gene-LDO09_RS07335;Dbxref=Genbank:WP_008632834.1;Name=WP_008632834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629312.1;locus_tag=LDO09_RS07335;product=DUF502 domain-containing protein;protein_id=WP_008632834.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1377875 1378240 . + . ID=gene-LDO09_RS07340;Name=LDO09_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07340;old_locus_tag=TthAA11_14470 NZ_AP024926.1 Protein Homology CDS 1377875 1378240 . + 0 ID=cds-WP_011173415.1;Parent=gene-LDO09_RS07340;Dbxref=Genbank:WP_011173415.1;Name=WP_011173415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510569.1;locus_tag=LDO09_RS07340;product=hypothetical protein;protein_id=WP_011173415.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1378237 1378920 . + . ID=gene-LDO09_RS07345;Name=LDO09_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07345;old_locus_tag=TthAA11_14480 NZ_AP024926.1 Protein Homology CDS 1378237 1378920 . + 0 ID=cds-WP_011173416.1;Parent=gene-LDO09_RS07345;Dbxref=Genbank:WP_011173416.1;Name=WP_011173416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515059.1;locus_tag=LDO09_RS07345;product=response regulator transcription factor;protein_id=WP_011173416.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1378921 1380174 . + . ID=gene-LDO09_RS07350;Name=LDO09_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07350;old_locus_tag=TthAA11_14490 NZ_AP024926.1 Protein Homology CDS 1378921 1380174 . + 0 ID=cds-WP_223968567.1;Parent=gene-LDO09_RS07350;Dbxref=Genbank:WP_223968567.1;Name=WP_223968567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173417.1;locus_tag=LDO09_RS07350;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_223968567.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1380171 1380449 . - . ID=gene-LDO09_RS07355;Name=LDO09_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07355;old_locus_tag=TthAA11_14500 NZ_AP024926.1 Protein Homology CDS 1380171 1380449 . - 0 ID=cds-WP_223968569.1;Parent=gene-LDO09_RS07355;Dbxref=Genbank:WP_223968569.1;Name=WP_223968569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633701.1;locus_tag=LDO09_RS07355;product=M48 family metallopeptidase;protein_id=WP_223968569.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1380578 1383475 . - . ID=gene-LDO09_RS07360;Name=LDO09_RS07360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS07360;old_locus_tag=TthAA11_14510;pseudo=true NZ_AP024926.1 Protein Homology CDS 1380578 1383475 . - 0 ID=cds-LDO09_RS07360;Parent=gene-LDO09_RS07360;Note=internal stop;Ontology_term=GO:0009307,GO:0009035,GO:0019812;gbkey=CDS;go_component=type I site-specific deoxyribonuclease complex|0019812||IEA;go_function=type I site-specific deoxyribonuclease activity|0009035||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF037510.2;locus_tag=LDO09_RS07360;product=HsdR family type I site-specific deoxyribonuclease;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 1383462 1385234 . - . ID=gene-LDO09_RS07365;Name=LDO09_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07365;old_locus_tag=TthAA11_14530 NZ_AP024926.1 Protein Homology CDS 1383462 1385234 . - 0 ID=cds-WP_223968571.1;Parent=gene-LDO09_RS07365;Dbxref=Genbank:WP_223968571.1;Name=WP_223968571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717451.1;locus_tag=LDO09_RS07365;product=DUF262 domain-containing protein;protein_id=WP_223968571.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1385227 1386147 . - . ID=gene-LDO09_RS07370;Name=LDO09_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07370;old_locus_tag=TthAA11_14540 NZ_AP024926.1 Protein Homology CDS 1385227 1386147 . - 0 ID=cds-WP_267461184.1;Parent=gene-LDO09_RS07370;Dbxref=Genbank:WP_267461184.1;Name=WP_267461184.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=LDO09_RS07370;product=restriction endonuclease subunit S;protein_id=WP_267461184.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1386211 1387311 . - . ID=gene-LDO09_RS07375;Name=LDO09_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07375;old_locus_tag=TthAA11_14550 NZ_AP024926.1 Protein Homology CDS 1386211 1387311 . - 0 ID=cds-WP_223968574.1-2;Parent=gene-LDO09_RS07375;Dbxref=Genbank:WP_223968574.1;Name=WP_223968574.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511178.1;locus_tag=LDO09_RS07375;product=transposase;protein_id=WP_223968574.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1387320 1387766 . - . ID=gene-LDO09_RS07380;Name=LDO09_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07380;old_locus_tag=TthAA11_14560 NZ_AP024926.1 GeneMarkS-2+ CDS 1387320 1387766 . - 0 ID=cds-WP_223968576.1;Parent=gene-LDO09_RS07380;Dbxref=Genbank:WP_223968576.1;Name=WP_223968576.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS07380;product=hypothetical protein;protein_id=WP_223968576.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1387763 1389349 . - . ID=gene-LDO09_RS07385;Name=LDO09_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07385;old_locus_tag=TthAA11_14570 NZ_AP024926.1 Protein Homology CDS 1387763 1389349 . - 0 ID=cds-WP_143586971.1;Parent=gene-LDO09_RS07385;Dbxref=Genbank:WP_143586971.1;Name=WP_143586971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013703906.1;locus_tag=LDO09_RS07385;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_143586971.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1389437 1390147 . + . ID=gene-LDO09_RS07390;Name=LDO09_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07390;old_locus_tag=TthAA11_14580 NZ_AP024926.1 Protein Homology CDS 1389437 1390147 . + 0 ID=cds-WP_223968578.1;Parent=gene-LDO09_RS07390;Dbxref=Genbank:WP_223968578.1;Name=WP_223968578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629309.1;locus_tag=LDO09_RS07390;product=(Fe-S)-binding protein;protein_id=WP_223968578.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1390137 1391525 . + . ID=gene-LDO09_RS07395;Name=LDO09_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07395;old_locus_tag=TthAA11_14590 NZ_AP024926.1 Protein Homology CDS 1390137 1391525 . + 0 ID=cds-WP_223968580.1;Parent=gene-LDO09_RS07395;Dbxref=Genbank:WP_223968580.1;Name=WP_223968580.1;Ontology_term=GO:0019516,GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173420.1;locus_tag=LDO09_RS07395;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_223968580.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1391515 1392078 . + . ID=gene-LDO09_RS07400;Name=LDO09_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07400;old_locus_tag=TthAA11_14600 NZ_AP024926.1 Protein Homology CDS 1391515 1392078 . + 0 ID=cds-WP_143586048.1;Parent=gene-LDO09_RS07400;Dbxref=Genbank:WP_143586048.1;Name=WP_143586048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173421.1;locus_tag=LDO09_RS07400;product=LUD domain-containing protein;protein_id=WP_143586048.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1392081 1392884 . - . ID=gene-LDO09_RS07405;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LDO09_RS07405;old_locus_tag=TthAA11_14610 NZ_AP024926.1 Protein Homology CDS 1392081 1392884 . - 0 ID=cds-WP_011173422.1;Parent=gene-LDO09_RS07405;Dbxref=Genbank:WP_011173422.1;Name=WP_011173422.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717923.1;locus_tag=LDO09_RS07405;product=signal peptidase I;protein_id=WP_011173422.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1392881 1393636 . - . ID=gene-LDO09_RS07410;Name=LDO09_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07410;old_locus_tag=TthAA11_14620 NZ_AP024926.1 Protein Homology CDS 1392881 1393636 . - 0 ID=cds-WP_143586050.1;Parent=gene-LDO09_RS07410;Dbxref=Genbank:WP_143586050.1;Name=WP_143586050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173423.1;locus_tag=LDO09_RS07410;product=patatin-like phospholipase family protein;protein_id=WP_143586050.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1393679 1394440 . + . ID=gene-LDO09_RS07415;Name=LDO09_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07415;old_locus_tag=TthAA11_14630 NZ_AP024926.1 Protein Homology CDS 1393679 1394440 . + 0 ID=cds-WP_143586052.1;Parent=gene-LDO09_RS07415;Dbxref=Genbank:WP_143586052.1;Name=WP_143586052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228629.1;locus_tag=LDO09_RS07415;product=serine/threonine-protein kinase;protein_id=WP_143586052.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1394718 1395800 . - . ID=gene-LDO09_RS07420;Name=LDO09_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07420;old_locus_tag=TthAA11_14640 NZ_AP024926.1 Protein Homology CDS 1394718 1395800 . - 0 ID=cds-WP_223968582.1;Parent=gene-LDO09_RS07420;Dbxref=Genbank:WP_223968582.1;Name=WP_223968582.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173425.1;locus_tag=LDO09_RS07420;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_223968582.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1395850 1396275 . + . ID=gene-LDO09_RS07425;Name=LDO09_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07425;old_locus_tag=TthAA11_14650 NZ_AP024926.1 Protein Homology CDS 1395850 1396275 . + 0 ID=cds-WP_143586056.1;Parent=gene-LDO09_RS07425;Dbxref=Genbank:WP_143586056.1;Name=WP_143586056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629301.1;locus_tag=LDO09_RS07425;product=OsmC family protein;protein_id=WP_143586056.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1396275 1397033 . + . ID=gene-LDO09_RS07430;Name=LDO09_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07430;old_locus_tag=TthAA11_14660 NZ_AP024926.1 Protein Homology CDS 1396275 1397033 . + 0 ID=cds-WP_223968584.1;Parent=gene-LDO09_RS07430;Dbxref=Genbank:WP_223968584.1;Name=WP_223968584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228633.1;locus_tag=LDO09_RS07430;product=type III pantothenate kinase;protein_id=WP_223968584.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1396996 1397352 . - . ID=gene-LDO09_RS07435;Name=LDO09_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07435;old_locus_tag=TthAA11_14670 NZ_AP024926.1 Protein Homology CDS 1396996 1397352 . - 0 ID=cds-WP_223968586.1;Parent=gene-LDO09_RS07435;Dbxref=Genbank:WP_223968586.1;Name=WP_223968586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003044388.1;locus_tag=LDO09_RS07435;product=YDG/SRA domain-containing protein;protein_id=WP_223968586.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1397364 1398053 . - . ID=gene-LDO09_RS07440;Name=LDO09_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07440;old_locus_tag=TthAA11_14680 NZ_AP024926.1 Protein Homology CDS 1397364 1398053 . - 0 ID=cds-WP_143584079.1-9;Parent=gene-LDO09_RS07440;Dbxref=Genbank:WP_143584079.1;Name=WP_143584079.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS07440;product=IS5-like element ISTth7 family transposase;protein_id=WP_143584079.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1398465 1398541 . + . ID=gene-LDO09_RS07445;Name=LDO09_RS07445;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS07445;old_locus_tag=TthAA11_t00360 NZ_AP024926.1 tRNAscan-SE tRNA 1398465 1398541 . + . ID=rna-LDO09_RS07445;Parent=gene-LDO09_RS07445;anticodon=(pos:1398499..1398501);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS07445;product=tRNA-Asp NZ_AP024926.1 tRNAscan-SE exon 1398465 1398541 . + . ID=exon-LDO09_RS07445-1;Parent=rna-LDO09_RS07445;anticodon=(pos:1398499..1398501);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS07445;product=tRNA-Asp NZ_AP024926.1 RefSeq gene 1398543 1398618 . + . ID=gene-LDO09_RS07450;Name=LDO09_RS07450;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS07450;old_locus_tag=TthAA11_t00370 NZ_AP024926.1 tRNAscan-SE tRNA 1398543 1398618 . + . ID=rna-LDO09_RS07450;Parent=gene-LDO09_RS07450;anticodon=(pos:1398576..1398578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS07450;product=tRNA-Phe NZ_AP024926.1 tRNAscan-SE exon 1398543 1398618 . + . ID=exon-LDO09_RS07450-1;Parent=rna-LDO09_RS07450;anticodon=(pos:1398576..1398578);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS07450;product=tRNA-Phe NZ_AP024926.1 RefSeq gene 1399156 1400001 . + . ID=gene-LDO09_RS07455;Name=LDO09_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07455;old_locus_tag=TthAA11_14700 NZ_AP024926.1 Protein Homology CDS 1399156 1400001 . + 0 ID=cds-WP_223965605.1;Parent=gene-LDO09_RS07455;Dbxref=Genbank:WP_223965605.1;Name=WP_223965605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013704078.1;locus_tag=LDO09_RS07455;product=transposase;protein_id=WP_223965605.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1400105 1401541 . + . ID=gene-LDO09_RS07460;Name=LDO09_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07460;old_locus_tag=TthAA11_14710 NZ_AP024926.1 Protein Homology CDS 1400105 1401541 . + 0 ID=cds-WP_223965606.1;Parent=gene-LDO09_RS07460;Dbxref=Genbank:WP_223965606.1;Name=WP_223965606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228635.1;locus_tag=LDO09_RS07460;product=HD domain-containing protein;protein_id=WP_223965606.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1401592 1402083 . + . ID=gene-LDO09_RS07465;Name=LDO09_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07465;old_locus_tag=TthAA11_14720 NZ_AP024926.1 Protein Homology CDS 1401592 1402083 . + 0 ID=cds-WP_011173430.1;Parent=gene-LDO09_RS07465;Dbxref=Genbank:WP_011173430.1;Name=WP_011173430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173430.1;locus_tag=LDO09_RS07465;product=DUF5317 domain-containing protein;protein_id=WP_011173430.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1402138 1403142 . + . ID=gene-LDO09_RS07470;Name=LDO09_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07470;old_locus_tag=TthAA11_14730 NZ_AP024926.1 Protein Homology CDS 1402138 1403142 . + 0 ID=cds-WP_223965607.1;Parent=gene-LDO09_RS07470;Dbxref=Genbank:WP_223965607.1;Name=WP_223965607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173431.1;locus_tag=LDO09_RS07470;product=homoisocitrate dehydrogenase;protein_id=WP_223965607.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1403277 1404410 . + . ID=gene-LDO09_RS07475;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=LDO09_RS07475;old_locus_tag=TthAA11_14740 NZ_AP024926.1 Protein Homology CDS 1403277 1404410 . + 0 ID=cds-WP_143586068.1;Parent=gene-LDO09_RS07475;Dbxref=Genbank:WP_143586068.1;Name=WP_143586068.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilM;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632862.1;locus_tag=LDO09_RS07475;product=type IV pilus assembly protein PilM;protein_id=WP_143586068.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1404403 1405026 . + . ID=gene-LDO09_RS07480;Name=LDO09_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07480;old_locus_tag=TthAA11_14750 NZ_AP024926.1 Protein Homology CDS 1404403 1405026 . + 0 ID=cds-WP_011228637.1;Parent=gene-LDO09_RS07480;Dbxref=Genbank:WP_011228637.1;Name=WP_011228637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510583.1;locus_tag=LDO09_RS07480;product=competence protein;protein_id=WP_011228637.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1405016 1405597 . + . ID=gene-LDO09_RS07485;Name=pilO;gbkey=Gene;gene=pilO;gene_biotype=protein_coding;locus_tag=LDO09_RS07485;old_locus_tag=TthAA11_14760 NZ_AP024926.1 Protein Homology CDS 1405016 1405597 . + 0 ID=cds-WP_143586070.1;Parent=gene-LDO09_RS07485;Dbxref=Genbank:WP_143586070.1;Name=WP_143586070.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;gene=pilO;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629294.1;locus_tag=LDO09_RS07485;product=type 4a pilus biogenesis protein PilO;protein_id=WP_143586070.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1405594 1406484 . + . ID=gene-LDO09_RS07490;Name=LDO09_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07490;old_locus_tag=TthAA11_14770 NZ_AP024926.1 Protein Homology CDS 1405594 1406484 . + 0 ID=cds-WP_223968588.1;Parent=gene-LDO09_RS07490;Dbxref=Genbank:WP_223968588.1;Name=WP_223968588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173435.1;locus_tag=LDO09_RS07490;product=competence protein;protein_id=WP_223968588.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1406481 1408754 . + . ID=gene-LDO09_RS07495;Name=LDO09_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07495;old_locus_tag=TthAA11_14780 NZ_AP024926.1 Protein Homology CDS 1406481 1408754 . + 0 ID=cds-WP_223968590.1;Parent=gene-LDO09_RS07495;Dbxref=Genbank:WP_223968590.1;Name=WP_223968590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632874.1;locus_tag=LDO09_RS07495;product=type II secretion system protein GspD;protein_id=WP_223968590.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1408813 1409964 . + . ID=gene-LDO09_RS07500;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=LDO09_RS07500;old_locus_tag=TthAA11_14790 NZ_AP024926.1 Protein Homology CDS 1408813 1409964 . + 0 ID=cds-WP_143586076.1;Parent=gene-LDO09_RS07500;Dbxref=Genbank:WP_143586076.1;Name=WP_143586076.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001269368.1;locus_tag=LDO09_RS07500;product=chorismate synthase;protein_id=WP_143586076.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1409989 1410543 . + . ID=gene-LDO09_RS07505;Name=LDO09_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07505;old_locus_tag=TthAA11_14800 NZ_AP024926.1 Protein Homology CDS 1409989 1410543 . + 0 ID=cds-WP_008632876.1;Parent=gene-LDO09_RS07505;Dbxref=Genbank:WP_008632876.1;Name=WP_008632876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632876.1;locus_tag=LDO09_RS07505;product=shikimate kinase;protein_id=WP_008632876.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1410521 1411567 . + . ID=gene-LDO09_RS07510;Name=LDO09_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07510;old_locus_tag=TthAA11_14810 NZ_AP024926.1 Protein Homology CDS 1410521 1411567 . + 0 ID=cds-WP_223965609.1;Parent=gene-LDO09_RS07510;Dbxref=Genbank:WP_223965609.1;Name=WP_223965609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510588.1;locus_tag=LDO09_RS07510;product=3-dehydroquinate synthase;protein_id=WP_223965609.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1411613 1412983 . - . ID=gene-LDO09_RS07515;Name=LDO09_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07515;old_locus_tag=TthAA11_14820 NZ_AP024926.1 Protein Homology CDS 1411613 1412983 . - 0 ID=cds-WP_223965610.1;Parent=gene-LDO09_RS07515;Dbxref=Genbank:WP_223965610.1;Name=WP_223965610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629289.1;locus_tag=LDO09_RS07515;product=RsmF rRNA methyltransferase first C-terminal domain-containing protein;protein_id=WP_223965610.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1413036 1413413 . + . ID=gene-LDO09_RS07520;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=LDO09_RS07520;old_locus_tag=TthAA11_14830 NZ_AP024926.1 Protein Homology CDS 1413036 1413413 . + 0 ID=cds-WP_143586084.1;Parent=gene-LDO09_RS07520;Dbxref=Genbank:WP_143586084.1;Name=WP_143586084.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173441.1;locus_tag=LDO09_RS07520;product=holo-ACP synthase;protein_id=WP_143586084.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1413391 1413744 . - . ID=gene-LDO09_RS07525;Name=LDO09_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07525;old_locus_tag=TthAA11_14840 NZ_AP024926.1 Protein Homology CDS 1413391 1413744 . - 0 ID=cds-WP_143586086.1;Parent=gene-LDO09_RS07525;Dbxref=Genbank:WP_143586086.1;Name=WP_143586086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228643.1;locus_tag=LDO09_RS07525;product=DUF4870 domain-containing protein;protein_id=WP_143586086.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1413744 1414316 . - . ID=gene-LDO09_RS07530;Name=LDO09_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07530;old_locus_tag=TthAA11_14850 NZ_AP024926.1 Protein Homology CDS 1413744 1414316 . - 0 ID=cds-WP_223965611.1;Parent=gene-LDO09_RS07530;Dbxref=Genbank:WP_223965611.1;Name=WP_223965611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629287.1;locus_tag=LDO09_RS07530;product=lysophospholipid acyltransferase family protein;protein_id=WP_223965611.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1414399 1415694 . + . ID=gene-LDO09_RS07535;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LDO09_RS07535;old_locus_tag=TthAA11_14860 NZ_AP024926.1 Protein Homology CDS 1414399 1415694 . + 0 ID=cds-WP_014510592.1;Parent=gene-LDO09_RS07535;Dbxref=Genbank:WP_014510592.1;Name=WP_014510592.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510592.1;locus_tag=LDO09_RS07535;product=ribosome biogenesis GTPase Der;protein_id=WP_014510592.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1415644 1416408 . - . ID=gene-LDO09_RS07540;Name=LDO09_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07540;old_locus_tag=TthAA11_14870 NZ_AP024926.1 Protein Homology CDS 1415644 1416408 . - 0 ID=cds-WP_223965612.1;Parent=gene-LDO09_RS07540;Dbxref=Genbank:WP_223965612.1;Name=WP_223965612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173445.1;locus_tag=LDO09_RS07540;product=NAD-dependent deacylase;protein_id=WP_223965612.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1416431 1417879 . + . ID=gene-LDO09_RS07545;Name=LDO09_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07545;old_locus_tag=TthAA11_14880 NZ_AP024926.1 Protein Homology CDS 1416431 1417879 . + 0 ID=cds-WP_223965613.1;Parent=gene-LDO09_RS07545;Dbxref=Genbank:WP_223965613.1;Name=WP_223965613.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228647.1;locus_tag=LDO09_RS07545;product=NAD(P)H-hydrate dehydratase;protein_id=WP_223965613.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1417976 1419103 . - . ID=gene-LDO09_RS07550;Name=LDO09_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07550;old_locus_tag=TthAA11_14890 NZ_AP024926.1 Protein Homology CDS 1417976 1419103 . - 0 ID=cds-WP_143586094.1;Parent=gene-LDO09_RS07550;Dbxref=Genbank:WP_143586094.1;Name=WP_143586094.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.2;locus_tag=LDO09_RS07550;product=MFS transporter;protein_id=WP_143586094.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1419273 1420154 . + . ID=gene-LDO09_RS07555;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=LDO09_RS07555;old_locus_tag=TthAA11_14900 NZ_AP024926.1 Protein Homology CDS 1419273 1420154 . + 0 ID=cds-WP_223965615.1;Parent=gene-LDO09_RS07555;Dbxref=Genbank:WP_223965615.1;Name=WP_223965615.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550808.1;locus_tag=LDO09_RS07555;product=homoserine kinase;protein_id=WP_223965615.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1420139 1420879 . + . ID=gene-LDO09_RS07560;Name=LDO09_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07560;old_locus_tag=TthAA11_14910 NZ_AP024926.1 Protein Homology CDS 1420139 1420879 . + 0 ID=cds-WP_223968592.1;Parent=gene-LDO09_RS07560;Dbxref=Genbank:WP_223968592.1;Name=WP_223968592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629283.1;locus_tag=LDO09_RS07560;product=DUF4388 domain-containing protein;protein_id=WP_223968592.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1420881 1420964 . - . ID=gene-LDO09_RS07565;Name=LDO09_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07565 NZ_AP024926.1 Protein Homology CDS 1420881 1420964 . - 0 ID=cds-WP_008632889.1;Parent=gene-LDO09_RS07565;Dbxref=Genbank:WP_008632889.1;Name=WP_008632889.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632889.1;locus_tag=LDO09_RS07565;product=30S ribosomal protein THX;protein_id=WP_008632889.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1420974 1421294 . - . ID=gene-LDO09_RS07570;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LDO09_RS07570;old_locus_tag=TthAA11_14920 NZ_AP024926.1 Protein Homology CDS 1420974 1421294 . - 0 ID=cds-WP_008632893.1;Parent=gene-LDO09_RS07570;Dbxref=Genbank:WP_008632893.1;Name=WP_008632893.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632893.1;locus_tag=LDO09_RS07570;product=30S ribosomal protein S20;protein_id=WP_008632893.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1421355 1421732 . - . ID=gene-LDO09_RS07575;Name=LDO09_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07575;old_locus_tag=TthAA11_14930 NZ_AP024926.1 Protein Homology CDS 1421355 1421732 . - 0 ID=cds-WP_143586100.1;Parent=gene-LDO09_RS07575;Dbxref=Genbank:WP_143586100.1;Name=WP_143586100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632896.1;locus_tag=LDO09_RS07575;product=hypothetical protein;protein_id=WP_143586100.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1421755 1423053 . + . ID=gene-LDO09_RS07580;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LDO09_RS07580;old_locus_tag=TthAA11_14940 NZ_AP024926.1 Protein Homology CDS 1421755 1423053 . + 0 ID=cds-WP_223968594.1;Parent=gene-LDO09_RS07580;Dbxref=Genbank:WP_223968594.1;Name=WP_223968594.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632897.1;locus_tag=LDO09_RS07580;product=tyrosine--tRNA ligase;protein_id=WP_223968594.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1423061 1423585 . - . ID=gene-LDO09_RS12130;Name=LDO09_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12130;old_locus_tag=TthAA11_14950 NZ_AP024926.1 Protein Homology CDS 1423061 1423585 . - 0 ID=cds-WP_014509880.1-4;Parent=gene-LDO09_RS12130;Dbxref=Genbank:WP_014509880.1;Name=WP_014509880.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=LDO09_RS12130;product=IS630 family transposase;protein_id=WP_014509880.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1423582 1424103 . - . ID=gene-LDO09_RS12135;Name=LDO09_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12135;old_locus_tag=TthAA11_14960 NZ_AP024926.1 Protein Homology CDS 1423582 1424103 . - 0 ID=cds-WP_223965695.1-3;Parent=gene-LDO09_RS12135;Dbxref=Genbank:WP_223965695.1;Name=WP_223965695.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=LDO09_RS12135;product=IS630 family transposase;protein_id=WP_223965695.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1424184 1424738 . - . ID=gene-LDO09_RS07590;Name=LDO09_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07590;old_locus_tag=TthAA11_14970 NZ_AP024926.1 Protein Homology CDS 1424184 1424738 . - 0 ID=cds-WP_223965618.1;Parent=gene-LDO09_RS07590;Dbxref=Genbank:WP_223965618.1;Name=WP_223965618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632898.1;locus_tag=LDO09_RS07590;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=WP_223965618.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1424741 1425721 . - . ID=gene-LDO09_RS07595;Name=LDO09_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07595;old_locus_tag=TthAA11_14980 NZ_AP024926.1 Protein Homology CDS 1424741 1425721 . - 0 ID=cds-WP_223965619.1;Parent=gene-LDO09_RS07595;Dbxref=Genbank:WP_223965619.1;Name=WP_223965619.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173452.1;locus_tag=LDO09_RS07595;product=cytochrome c;protein_id=WP_223965619.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1425718 1426137 . - . ID=gene-LDO09_RS07600;Name=LDO09_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07600;old_locus_tag=TthAA11_14990 NZ_AP024926.1 Protein Homology CDS 1425718 1426137 . - 0 ID=cds-WP_223965620.1;Parent=gene-LDO09_RS07600;Dbxref=Genbank:WP_223965620.1;Name=WP_223965620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629279.1;locus_tag=LDO09_RS07600;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_223965620.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1426134 1426670 . - . ID=gene-LDO09_RS07605;Name=LDO09_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07605;old_locus_tag=TthAA11_15000 NZ_AP024926.1 Protein Homology CDS 1426134 1426670 . - 0 ID=cds-WP_223965621.1;Parent=gene-LDO09_RS07605;Dbxref=Genbank:WP_223965621.1;Name=WP_223965621.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629278.1;locus_tag=LDO09_RS07605;product=redoxin domain-containing protein;protein_id=WP_223965621.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1426667 1428598 . - . ID=gene-LDO09_RS07610;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=LDO09_RS07610;old_locus_tag=TthAA11_15010 NZ_AP024926.1 Protein Homology CDS 1426667 1428598 . - 0 ID=cds-WP_223968596.1;Parent=gene-LDO09_RS07610;Dbxref=Genbank:WP_223968596.1;Name=WP_223968596.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228654.1;locus_tag=LDO09_RS07610;product=cytochrome c biogenesis protein CcsA;protein_id=WP_223968596.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1428595 1429023 . - . ID=gene-LDO09_RS07615;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=LDO09_RS07615;old_locus_tag=TthAA11_15020 NZ_AP024926.1 Protein Homology CDS 1428595 1429023 . - 0 ID=cds-WP_223965623.1;Parent=gene-LDO09_RS07615;Dbxref=Genbank:WP_223965623.1;Name=WP_223965623.1;gbkey=CDS;gene=ccmE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173456.1;locus_tag=LDO09_RS07615;product=cytochrome c maturation protein CcmE;protein_id=WP_223965623.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1429115 1429801 . - . ID=gene-LDO09_RS07620;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=LDO09_RS07620;old_locus_tag=TthAA11_15030 NZ_AP024926.1 Protein Homology CDS 1429115 1429801 . - 0 ID=cds-WP_223968598.1;Parent=gene-LDO09_RS07620;Dbxref=Genbank:WP_223968598.1;Name=WP_223968598.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013157431.1;locus_tag=LDO09_RS07620;product=cytochrome c biogenesis protein CcsA;protein_id=WP_223968598.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1429863 1430528 . - . ID=gene-LDO09_RS07625;Name=LDO09_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07625;old_locus_tag=TthAA11_15040 NZ_AP024926.1 Protein Homology CDS 1429863 1430528 . - 0 ID=cds-WP_143586116.1;Parent=gene-LDO09_RS07625;Dbxref=Genbank:WP_143586116.1;Name=WP_143586116.1;Ontology_term=GO:0015886,GO:0017004,GO:0015232,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228657.1;locus_tag=LDO09_RS07625;product=heme exporter protein CcmB;protein_id=WP_143586116.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1430525 1431094 . - . ID=gene-LDO09_RS07630;Name=LDO09_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07630;old_locus_tag=TthAA11_15050 NZ_AP024926.1 Protein Homology CDS 1430525 1431094 . - 0 ID=cds-WP_143586118.1;Parent=gene-LDO09_RS07630;Dbxref=Genbank:WP_143586118.1;Name=WP_143586118.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228658.1;locus_tag=LDO09_RS07630;product=ATP-binding cassette domain-containing protein;protein_id=WP_143586118.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1431135 1431803 . - . ID=gene-LDO09_RS07635;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=LDO09_RS07635;old_locus_tag=TthAA11_15060 NZ_AP024926.1 Protein Homology CDS 1431135 1431803 . - 0 ID=cds-WP_014629273.1;Parent=gene-LDO09_RS07635;Dbxref=Genbank:WP_014629273.1;Name=WP_014629273.1;gbkey=CDS;gene=ccdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173460.1;locus_tag=LDO09_RS07635;product=cytochrome c biogenesis protein CcdA;protein_id=WP_014629273.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1431813 1432680 . - . ID=gene-LDO09_RS07640;Name=LDO09_RS07640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS07640;pseudo=true NZ_AP024926.1 Protein Homology CDS 1431813 1432680 . - 0 ID=cds-LDO09_RS07640;Parent=gene-LDO09_RS07640;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611120.1;locus_tag=LDO09_RS07640;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 1432719 1433105 . + . ID=gene-LDO09_RS07645;Name=LDO09_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07645;old_locus_tag=TthAA11_15090 NZ_AP024926.1 Protein Homology CDS 1432719 1433105 . + 0 ID=cds-WP_223968600.1;Parent=gene-LDO09_RS07645;Dbxref=Genbank:WP_223968600.1;Name=WP_223968600.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033580.1;locus_tag=LDO09_RS07645;product=IS5 family transposase;protein_id=WP_223968600.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1433057 1434276 . - . ID=gene-LDO09_RS07650;Name=LDO09_RS07650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS07650;pseudo=true NZ_AP024926.1 Protein Homology CDS 1433057 1434276 . - 0 ID=cds-LDO09_RS07650;Parent=gene-LDO09_RS07650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1;locus_tag=LDO09_RS07650;product=IS256-like element ISTth4 family transposase;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 1434256 1434825 . + . ID=gene-LDO09_RS07655;Name=LDO09_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07655;old_locus_tag=TthAA11_15120 NZ_AP024926.1 Protein Homology CDS 1434256 1434825 . + 0 ID=cds-WP_223968602.1;Parent=gene-LDO09_RS07655;Dbxref=Genbank:WP_223968602.1;Name=WP_223968602.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013752.2;locus_tag=LDO09_RS07655;product=transposase;protein_id=WP_223968602.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1434878 1435435 . - . ID=gene-LDO09_RS07660;Name=LDO09_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07660;old_locus_tag=TthAA11_15130 NZ_AP024926.1 Protein Homology CDS 1434878 1435435 . - 0 ID=cds-WP_014510607.1;Parent=gene-LDO09_RS07660;Dbxref=Genbank:WP_014510607.1;Name=WP_014510607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629272.1;locus_tag=LDO09_RS07660;product=cytochrome c;protein_id=WP_014510607.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1435428 1436720 . - . ID=gene-LDO09_RS07665;Name=soxC;gbkey=Gene;gene=soxC;gene_biotype=protein_coding;locus_tag=LDO09_RS07665;old_locus_tag=TthAA11_15140 NZ_AP024926.1 Protein Homology CDS 1435428 1436720 . - 0 ID=cds-WP_143586120.1;Parent=gene-LDO09_RS07665;Dbxref=Genbank:WP_143586120.1;Name=WP_143586120.1;Ontology_term=GO:0016491,GO:0030151;gbkey=CDS;gene=soxC;go_function=oxidoreductase activity|0016491||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629271.1;locus_tag=LDO09_RS07665;product=sulfite dehydrogenase;protein_id=WP_143586120.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1436790 1438076 . - . ID=gene-LDO09_RS07670;Name=LDO09_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07670;old_locus_tag=TthAA11_15150 NZ_AP024926.1 Protein Homology CDS 1436790 1438076 . - 0 ID=cds-WP_143586122.1;Parent=gene-LDO09_RS07670;Dbxref=Genbank:WP_143586122.1;Name=WP_143586122.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629270.1;locus_tag=LDO09_RS07670;product=FAD-dependent oxidoreductase;protein_id=WP_143586122.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1438091 1438945 . - . ID=gene-LDO09_RS07675;Name=LDO09_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07675;old_locus_tag=TthAA11_15160 NZ_AP024926.1 Protein Homology CDS 1438091 1438945 . - 0 ID=cds-WP_143586124.1;Parent=gene-LDO09_RS07675;Dbxref=Genbank:WP_143586124.1;Name=WP_143586124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510610.1;locus_tag=LDO09_RS07675;product=translation initiation factor 2;protein_id=WP_143586124.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1438942 1439376 . - . ID=gene-LDO09_RS07680;Name=LDO09_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07680;old_locus_tag=TthAA11_15170 NZ_AP024926.1 Protein Homology CDS 1438942 1439376 . - 0 ID=cds-WP_143586126.1;Parent=gene-LDO09_RS07680;Dbxref=Genbank:WP_143586126.1;Name=WP_143586126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228663.1;locus_tag=LDO09_RS07680;product=rhodanese-like domain-containing protein;protein_id=WP_143586126.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1439379 1440185 . - . ID=gene-LDO09_RS07685;Name=soxA;gbkey=Gene;gene=soxA;gene_biotype=protein_coding;locus_tag=LDO09_RS07685;old_locus_tag=TthAA11_15180 NZ_AP024926.1 Protein Homology CDS 1439379 1440185 . - 0 ID=cds-WP_143586128.1;Parent=gene-LDO09_RS07685;Dbxref=Genbank:WP_143586128.1;Name=WP_143586128.1;Ontology_term=GO:0019417,GO:0009055,GO:0016669,GO:0020037,GO:0070069;gbkey=CDS;gene=soxA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity%2C acting on a sulfur group of donors%2C cytochrome as acceptor|0016669||IEA,heme binding|0020037||IEA;go_process=sulfur oxidation|0019417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510612.1;locus_tag=LDO09_RS07685;product=sulfur oxidation c-type cytochrome SoxA;protein_id=WP_143586128.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1440189 1440749 . - . ID=gene-LDO09_RS07690;Name=soxX;gbkey=Gene;gene=soxX;gene_biotype=protein_coding;locus_tag=LDO09_RS07690;old_locus_tag=TthAA11_15190 NZ_AP024926.1 Protein Homology CDS 1440189 1440749 . - 0 ID=cds-WP_223968604.1;Parent=gene-LDO09_RS07690;Dbxref=Genbank:WP_223968604.1;Name=WP_223968604.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;gene=soxX;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173467.1;locus_tag=LDO09_RS07690;product=sulfur oxidation c-type cytochrome SoxX;protein_id=WP_223968604.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1440746 1442467 . - . ID=gene-LDO09_RS07695;Name=soxB;gbkey=Gene;gene=soxB;gene_biotype=protein_coding;locus_tag=LDO09_RS07695;old_locus_tag=TthAA11_15200 NZ_AP024926.1 Protein Homology CDS 1440746 1442467 . - 0 ID=cds-WP_143586132.1;Parent=gene-LDO09_RS07695;Dbxref=Genbank:WP_143586132.1;Name=WP_143586132.1;Ontology_term=GO:0030145;gbkey=CDS;gene=soxB;go_function=manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173468.1;locus_tag=LDO09_RS07695;product=thiosulfohydrolase SoxB;protein_id=WP_143586132.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1442464 1443036 . - . ID=gene-LDO09_RS07700;Name=soxX;gbkey=Gene;gene=soxX;gene_biotype=protein_coding;locus_tag=LDO09_RS07700;old_locus_tag=TthAA11_15210 NZ_AP024926.1 Protein Homology CDS 1442464 1443036 . - 0 ID=cds-WP_143586134.1;Parent=gene-LDO09_RS07700;Dbxref=Genbank:WP_143586134.1;Name=WP_143586134.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;gene=soxX;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461387.1;locus_tag=LDO09_RS07700;product=sulfur oxidation c-type cytochrome SoxX;protein_id=WP_143586134.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1443046 1443825 . - . ID=gene-LDO09_RS07705;Name=soxA;gbkey=Gene;gene=soxA;gene_biotype=protein_coding;locus_tag=LDO09_RS07705;old_locus_tag=TthAA11_15220 NZ_AP024926.1 Protein Homology CDS 1443046 1443825 . - 0 ID=cds-WP_143586136.1;Parent=gene-LDO09_RS07705;Dbxref=Genbank:WP_143586136.1;Name=WP_143586136.1;Ontology_term=GO:0019417,GO:0009055,GO:0016669,GO:0020037,GO:0070069;gbkey=CDS;gene=soxA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity%2C acting on a sulfur group of donors%2C cytochrome as acceptor|0016669||IEA,heme binding|0020037||IEA;go_process=sulfur oxidation|0019417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173470.1;locus_tag=LDO09_RS07705;product=sulfur oxidation c-type cytochrome SoxA;protein_id=WP_143586136.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1443886 1444212 . - . ID=gene-LDO09_RS07710;Name=soxZ;gbkey=Gene;gene=soxZ;gene_biotype=protein_coding;locus_tag=LDO09_RS07710;old_locus_tag=TthAA11_15230 NZ_AP024926.1 Protein Homology CDS 1443886 1444212 . - 0 ID=cds-WP_011173471.1;Parent=gene-LDO09_RS07710;Dbxref=Genbank:WP_011173471.1;Name=WP_011173471.1;gbkey=CDS;gene=soxZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173471.1;locus_tag=LDO09_RS07710;product=thiosulfate oxidation carrier complex protein SoxZ;protein_id=WP_011173471.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1444225 1444677 . - . ID=gene-LDO09_RS07715;Name=soxY;gbkey=Gene;gene=soxY;gene_biotype=protein_coding;locus_tag=LDO09_RS07715;old_locus_tag=TthAA11_15240 NZ_AP024926.1 Protein Homology CDS 1444225 1444677 . - 0 ID=cds-WP_014510617.1;Parent=gene-LDO09_RS07715;Dbxref=Genbank:WP_014510617.1;Name=WP_014510617.1;gbkey=CDS;gene=soxY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014514999.1;locus_tag=LDO09_RS07715;product=thiosulfate oxidation carrier protein SoxY;protein_id=WP_014510617.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1444670 1445131 . - . ID=gene-LDO09_RS07720;Name=LDO09_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07720;old_locus_tag=TthAA11_15250 NZ_AP024926.1 Protein Homology CDS 1444670 1445131 . - 0 ID=cds-WP_223968607.1;Parent=gene-LDO09_RS07720;Dbxref=Genbank:WP_223968607.1;Name=WP_223968607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173473.1;locus_tag=LDO09_RS07720;product=thioredoxin family protein;protein_id=WP_223968607.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1445267 1445713 . + . ID=gene-LDO09_RS07725;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;locus_tag=LDO09_RS07725;old_locus_tag=TthAA11_15260 NZ_AP024926.1 Protein Homology CDS 1445267 1445713 . + 0 ID=cds-WP_223968609.1;Parent=gene-LDO09_RS07725;Dbxref=Genbank:WP_223968609.1;Name=WP_223968609.1;gbkey=CDS;gene=cycA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228671.1;locus_tag=LDO09_RS07725;product=cytochrome C-552;protein_id=WP_223968609.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1445815 1446765 . + . ID=gene-LDO09_RS07730;Name=LDO09_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07730;old_locus_tag=TthAA11_15270 NZ_AP024926.1 Protein Homology CDS 1445815 1446765 . + 0 ID=cds-WP_223968611.1;Parent=gene-LDO09_RS07730;Dbxref=Genbank:WP_223968611.1;Name=WP_223968611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110529.1;locus_tag=LDO09_RS07730;product=ABC transporter ATP-binding protein;protein_id=WP_223968611.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1446762 1447373 . + . ID=gene-LDO09_RS07735;Name=LDO09_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07735;old_locus_tag=TthAA11_15280 NZ_AP024926.1 Protein Homology CDS 1446762 1447373 . + 0 ID=cds-WP_223968613.1;Parent=gene-LDO09_RS07735;Dbxref=Genbank:WP_223968613.1;Name=WP_223968613.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228673.1;locus_tag=LDO09_RS07735;product=thiamine diphosphokinase;protein_id=WP_223968613.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1447370 1448092 . - . ID=gene-LDO09_RS07740;Name=LDO09_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07740;old_locus_tag=TthAA11_15290 NZ_AP024926.1 Protein Homology CDS 1447370 1448092 . - 0 ID=cds-WP_223968615.1;Parent=gene-LDO09_RS07740;Dbxref=Genbank:WP_223968615.1;Name=WP_223968615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228674.1;locus_tag=LDO09_RS07740;product=hypothetical protein;protein_id=WP_223968615.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1448089 1450167 . - . ID=gene-LDO09_RS07745;Name=LDO09_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07745;old_locus_tag=TthAA11_15300 NZ_AP024926.1 Protein Homology CDS 1448089 1450167 . - 0 ID=cds-WP_223968617.1;Parent=gene-LDO09_RS07745;Dbxref=Genbank:WP_223968617.1;Name=WP_223968617.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173478.1;locus_tag=LDO09_RS07745;product=UvrD-helicase domain-containing protein;protein_id=WP_223968617.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1450205 1451092 . + . ID=gene-LDO09_RS07750;Name=LDO09_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07750;old_locus_tag=TthAA11_15310 NZ_AP024926.1 Protein Homology CDS 1450205 1451092 . + 0 ID=cds-WP_143586150.1;Parent=gene-LDO09_RS07750;Dbxref=Genbank:WP_143586150.1;Name=WP_143586150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173479.1;locus_tag=LDO09_RS07750;product=phosphoglucomutase;protein_id=WP_143586150.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1451089 1452042 . + . ID=gene-LDO09_RS07755;Name=LDO09_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07755;old_locus_tag=TthAA11_15320 NZ_AP024926.1 Protein Homology CDS 1451089 1452042 . + 0 ID=cds-WP_143586153.1;Parent=gene-LDO09_RS07755;Dbxref=Genbank:WP_143586153.1;Name=WP_143586153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632921.1;locus_tag=LDO09_RS07755;product=MBL fold metallo-hydrolase;protein_id=WP_143586153.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1452117 1453763 . + . ID=gene-LDO09_RS07760;Name=LDO09_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07760;old_locus_tag=TthAA11_15330 NZ_AP024926.1 Protein Homology CDS 1452117 1453763 . + 0 ID=cds-WP_143586155.1;Parent=gene-LDO09_RS07760;Dbxref=Genbank:WP_143586155.1;Name=WP_143586155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510625.1;locus_tag=LDO09_RS07760;product=long-chain fatty acid--CoA ligase;protein_id=WP_143586155.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1453773 1453982 . + . ID=gene-LDO09_RS07765;Name=LDO09_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07765;old_locus_tag=TthAA11_15340 NZ_AP024926.1 Protein Homology CDS 1453773 1453982 . + 0 ID=cds-WP_143586157.1;Parent=gene-LDO09_RS07765;Dbxref=Genbank:WP_143586157.1;Name=WP_143586157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510626.1;locus_tag=LDO09_RS07765;product=dodecin family protein;protein_id=WP_143586157.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1454052 1454488 . + . ID=gene-LDO09_RS07770;Name=LDO09_RS07770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS07770;old_locus_tag=TthAA11_15360;pseudo=true NZ_AP024926.1 Protein Homology CDS 1454052 1454488 . + 0 ID=cds-LDO09_RS07770;Parent=gene-LDO09_RS07770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510627.1;locus_tag=LDO09_RS07770;product=DUF2267 domain-containing protein;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 1454575 1455447 . - . ID=gene-LDO09_RS07775;Name=LDO09_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07775;old_locus_tag=TthAA11_15370 NZ_AP024926.1 Protein Homology CDS 1454575 1455447 . - 0 ID=cds-WP_143586159.1;Parent=gene-LDO09_RS07775;Dbxref=Genbank:WP_143586159.1;Name=WP_143586159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173484.1;locus_tag=LDO09_RS07775;product=phosphohydrolase;protein_id=WP_143586159.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1455491 1456306 . - . ID=gene-LDO09_RS07780;Name=LDO09_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07780;old_locus_tag=TthAA11_15380 NZ_AP024926.1 Protein Homology CDS 1455491 1456306 . - 0 ID=cds-WP_143586161.1;Parent=gene-LDO09_RS07780;Dbxref=Genbank:WP_143586161.1;Name=WP_143586161.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629251.1;locus_tag=LDO09_RS07780;product=enoyl-CoA hydratase-related protein;protein_id=WP_143586161.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1456310 1457017 . - . ID=gene-LDO09_RS07785;Name=LDO09_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07785;old_locus_tag=TthAA11_15390 NZ_AP024926.1 Protein Homology CDS 1456310 1457017 . - 0 ID=cds-WP_143586164.1;Parent=gene-LDO09_RS07785;Dbxref=Genbank:WP_143586164.1;Name=WP_143586164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110336.1;locus_tag=LDO09_RS07785;product=purine-nucleoside phosphorylase;protein_id=WP_143586164.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1457030 1457659 . - . ID=gene-LDO09_RS07790;Name=LDO09_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07790;old_locus_tag=TthAA11_15400 NZ_AP024926.1 Protein Homology CDS 1457030 1457659 . - 0 ID=cds-WP_143586166.1;Parent=gene-LDO09_RS07790;Dbxref=Genbank:WP_143586166.1;Name=WP_143586166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173487.1;locus_tag=LDO09_RS07790;product=ABC transporter ATP-binding protein;protein_id=WP_143586166.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1457708 1458358 . + . ID=gene-LDO09_RS07795;Name=LDO09_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07795;old_locus_tag=TthAA11_15410 NZ_AP024926.1 Protein Homology CDS 1457708 1458358 . + 0 ID=cds-WP_143586168.1;Parent=gene-LDO09_RS07795;Dbxref=Genbank:WP_143586168.1;Name=WP_143586168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228681.1;locus_tag=LDO09_RS07795;product=Crp/Fnr family transcriptional regulator;protein_id=WP_143586168.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1458368 1459081 . + . ID=gene-LDO09_RS07800;Name=LDO09_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07800;old_locus_tag=TthAA11_15420 NZ_AP024926.1 Protein Homology CDS 1458368 1459081 . + 0 ID=cds-WP_008632942.1;Parent=gene-LDO09_RS07800;Dbxref=Genbank:WP_008632942.1;Name=WP_008632942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632942.1;locus_tag=LDO09_RS07800;product=2-phosphosulfolactate phosphatase;protein_id=WP_008632942.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1459134 1460048 . - . ID=gene-LDO09_RS07805;Name=LDO09_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07805;old_locus_tag=TthAA11_15430 NZ_AP024926.1 Protein Homology CDS 1459134 1460048 . - 0 ID=cds-WP_223965631.1;Parent=gene-LDO09_RS07805;Dbxref=Genbank:WP_223965631.1;Name=WP_223965631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632943.1;locus_tag=LDO09_RS07805;product=sugar aminotransferase;protein_id=WP_223965631.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1460124 1462982 . + . ID=gene-LDO09_RS07810;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LDO09_RS07810;old_locus_tag=TthAA11_15440 NZ_AP024926.1 Protein Homology CDS 1460124 1462982 . + 0 ID=cds-WP_143586172.1;Parent=gene-LDO09_RS07810;Dbxref=Genbank:WP_143586172.1;Name=WP_143586172.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrA;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550310.1;locus_tag=LDO09_RS07810;product=excinuclease ABC subunit UvrA;protein_id=WP_143586172.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1463030 1464019 . - . ID=gene-LDO09_RS07815;Name=LDO09_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07815;old_locus_tag=TthAA11_15450 NZ_AP024926.1 Protein Homology CDS 1463030 1464019 . - 0 ID=cds-WP_143586175.1;Parent=gene-LDO09_RS07815;Dbxref=Genbank:WP_143586175.1;Name=WP_143586175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510631.1;locus_tag=LDO09_RS07815;product=TIGR00341 family protein;protein_id=WP_143586175.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1464021 1465352 . - . ID=gene-LDO09_RS07820;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=LDO09_RS07820;old_locus_tag=TthAA11_15460 NZ_AP024926.1 Protein Homology CDS 1464021 1465352 . - 0 ID=cds-WP_143586177.1;Parent=gene-LDO09_RS07820;Dbxref=Genbank:WP_143586177.1;Name=WP_143586177.1;Ontology_term=GO:0008033,GO:0050660;gbkey=CDS;gene=trmFO;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629245.1;locus_tag=LDO09_RS07820;product=methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO;protein_id=WP_143586177.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1465404 1465571 . + . ID=gene-LDO09_RS07825;Name=LDO09_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07825;old_locus_tag=TthAA11_15470 NZ_AP024926.1 Protein Homology CDS 1465404 1465571 . + 0 ID=cds-WP_172619145.1;Parent=gene-LDO09_RS07825;Dbxref=Genbank:WP_172619145.1;Name=WP_172619145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173494.1;locus_tag=LDO09_RS07825;product=hypothetical protein;protein_id=WP_172619145.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1465568 1466326 . + . ID=gene-LDO09_RS07830;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=LDO09_RS07830;old_locus_tag=TthAA11_15480 NZ_AP024926.1 Protein Homology CDS 1465568 1466326 . + 0 ID=cds-WP_143586179.1;Parent=gene-LDO09_RS07830;Dbxref=Genbank:WP_143586179.1;Name=WP_143586179.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046073.1;locus_tag=LDO09_RS07830;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_143586179.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1466331 1466975 . + . ID=gene-LDO09_RS07835;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=LDO09_RS07835;old_locus_tag=TthAA11_15490 NZ_AP024926.1 Protein Homology CDS 1466331 1466975 . + 0 ID=cds-WP_223968619.1;Parent=gene-LDO09_RS07835;Dbxref=Genbank:WP_223968619.1;Name=WP_223968619.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228687.1;locus_tag=LDO09_RS07835;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_223968619.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1466965 1467933 . + . ID=gene-LDO09_RS07840;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=LDO09_RS07840;old_locus_tag=TthAA11_15500 NZ_AP024926.1 Protein Homology CDS 1466965 1467933 . + 0 ID=cds-WP_008632957.1;Parent=gene-LDO09_RS07840;Dbxref=Genbank:WP_008632957.1;Name=WP_008632957.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632957.1;locus_tag=LDO09_RS07840;product=class II fructose-bisphosphatase;protein_id=WP_008632957.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1468055 1469092 . + . ID=gene-LDO09_RS07845;Name=LDO09_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07845;old_locus_tag=TthAA11_15510 NZ_AP024926.1 Protein Homology CDS 1468055 1469092 . + 0 ID=cds-WP_143586184.1;Parent=gene-LDO09_RS07845;Dbxref=Genbank:WP_143586184.1;Name=WP_143586184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228688.1;locus_tag=LDO09_RS07845;product=alanine dehydrogenase;protein_id=WP_143586184.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1469089 1470423 . + . ID=gene-LDO09_RS07850;Name=LDO09_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07850;old_locus_tag=TthAA11_15520 NZ_AP024926.1 Protein Homology CDS 1469089 1470423 . + 0 ID=cds-WP_223965635.1;Parent=gene-LDO09_RS07850;Dbxref=Genbank:WP_223965635.1;Name=WP_223965635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629242.1;locus_tag=LDO09_RS07850;product=4-hydroxybutyrate CoA-transferase;protein_id=WP_223965635.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1470533 1471288 . + . ID=gene-LDO09_RS07855;Name=LDO09_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07855;old_locus_tag=TthAA11_15530 NZ_AP024926.1 Protein Homology CDS 1470533 1471288 . + 0 ID=cds-WP_223968621.1;Parent=gene-LDO09_RS07855;Dbxref=Genbank:WP_223968621.1;Name=WP_223968621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510637.1;locus_tag=LDO09_RS07855;product=TatD family hydrolase;protein_id=WP_223968621.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1471270 1472583 . + . ID=gene-LDO09_RS07860;Name=LDO09_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07860;old_locus_tag=TthAA11_15540 NZ_AP024926.1 Protein Homology CDS 1471270 1472583 . + 0 ID=cds-WP_143586189.1;Parent=gene-LDO09_RS07860;Dbxref=Genbank:WP_143586189.1;Name=WP_143586189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629240.1;locus_tag=LDO09_RS07860;product=phospholipase D-like domain-containing protein;protein_id=WP_143586189.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1472570 1472869 . + . ID=gene-LDO09_RS07865;Name=LDO09_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07865;old_locus_tag=TthAA11_15550 NZ_AP024926.1 Protein Homology CDS 1472570 1472869 . + 0 ID=cds-WP_143586191.1;Parent=gene-LDO09_RS07865;Dbxref=Genbank:WP_143586191.1;Name=WP_143586191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632965.1;locus_tag=LDO09_RS07865;product=hypothetical protein;protein_id=WP_143586191.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1472986 1474254 . + . ID=gene-LDO09_RS07870;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LDO09_RS07870;old_locus_tag=TthAA11_15560 NZ_AP024926.1 Protein Homology CDS 1472986 1474254 . + 0 ID=cds-WP_143586193.1;Parent=gene-LDO09_RS07870;Dbxref=Genbank:WP_143586193.1;Name=WP_143586193.1;Ontology_term=GO:0006422,GO:0000166,GO:0003676,GO:0004815,GO:0005524;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046100.1;locus_tag=LDO09_RS07870;product=aspartate--tRNA(Asn) ligase;protein_id=WP_143586193.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1474338 1474892 . + . ID=gene-LDO09_RS07875;Name=LDO09_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07875;old_locus_tag=TthAA11_15570 NZ_AP024926.1 Protein Homology CDS 1474338 1474892 . + 0 ID=cds-WP_143586196.1;Parent=gene-LDO09_RS07875;Dbxref=Genbank:WP_143586196.1;Name=WP_143586196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632969.1;locus_tag=LDO09_RS07875;product=DJ-1/PfpI family protein;protein_id=WP_143586196.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1474946 1475644 . - . ID=gene-LDO09_RS07880;Name=LDO09_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07880;old_locus_tag=TthAA11_15580 NZ_AP024926.1 Protein Homology CDS 1474946 1475644 . - 0 ID=cds-WP_143586198.1;Parent=gene-LDO09_RS07880;Dbxref=Genbank:WP_143586198.1;Name=WP_143586198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516065.1;locus_tag=LDO09_RS07880;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_143586198.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1475654 1477387 . - . ID=gene-LDO09_RS07885;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LDO09_RS07885;old_locus_tag=TthAA11_15590 NZ_AP024926.1 Protein Homology CDS 1475654 1477387 . - 0 ID=cds-WP_014510641.1;Parent=gene-LDO09_RS07885;Dbxref=Genbank:WP_014510641.1;Name=WP_014510641.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046104.1;locus_tag=LDO09_RS07885;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_014510641.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1477389 1477784 . - . ID=gene-LDO09_RS07890;Name=LDO09_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07890;old_locus_tag=TthAA11_15600 NZ_AP024926.1 Protein Homology CDS 1477389 1477784 . - 0 ID=cds-WP_008632977.1;Parent=gene-LDO09_RS07890;Dbxref=Genbank:WP_008632977.1;Name=WP_008632977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717776.1;locus_tag=LDO09_RS07890;product=succinate dehydrogenase hydrophobic membrane anchor subunit;protein_id=WP_008632977.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1477774 1478139 . - . ID=gene-LDO09_RS07895;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=LDO09_RS07895;old_locus_tag=TthAA11_15610 NZ_AP024926.1 Protein Homology CDS 1477774 1478139 . - 0 ID=cds-WP_014629235.1;Parent=gene-LDO09_RS07895;Dbxref=Genbank:WP_014629235.1;Name=WP_014629235.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhC;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717777.1;locus_tag=LDO09_RS07895;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_014629235.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1478435 1478869 . + . ID=gene-LDO09_RS07900;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=LDO09_RS07900;old_locus_tag=TthAA11_15620 NZ_AP024926.1 Protein Homology CDS 1478435 1478869 . + 0 ID=cds-WP_014510642.1;Parent=gene-LDO09_RS07900;Dbxref=Genbank:WP_014510642.1;Name=WP_014510642.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510642.1;locus_tag=LDO09_RS07900;product=adenosylmethionine decarboxylase;protein_id=WP_014510642.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1478957 1480102 . + . ID=gene-LDO09_RS07905;Name=LDO09_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07905;old_locus_tag=TthAA11_15630 NZ_AP024926.1 Protein Homology CDS 1478957 1480102 . + 0 ID=cds-WP_014629233.1;Parent=gene-LDO09_RS07905;Dbxref=Genbank:WP_014629233.1;Name=WP_014629233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629233.1;locus_tag=LDO09_RS07905;product=NEW3 domain-containing protein;protein_id=WP_014629233.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1480104 1481027 . + . ID=gene-LDO09_RS07910;Name=LDO09_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07910;old_locus_tag=TthAA11_15640 NZ_AP024926.1 Protein Homology CDS 1480104 1481027 . + 0 ID=cds-WP_143586202.1;Parent=gene-LDO09_RS07910;Dbxref=Genbank:WP_143586202.1;Name=WP_143586202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510643.1;locus_tag=LDO09_RS07910;product=ABC transporter ATP-binding protein;protein_id=WP_143586202.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1481017 1481973 . + . ID=gene-LDO09_RS07915;Name=LDO09_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07915;old_locus_tag=TthAA11_15650 NZ_AP024926.1 Protein Homology CDS 1481017 1481973 . + 0 ID=cds-WP_008632987.1;Parent=gene-LDO09_RS07915;Dbxref=Genbank:WP_008632987.1;Name=WP_008632987.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173511.1;locus_tag=LDO09_RS07915;product=ABC transporter permease subunit;protein_id=WP_008632987.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1481990 1482370 . - . ID=gene-LDO09_RS07920;Name=LDO09_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07920;old_locus_tag=TthAA11_15660 NZ_AP024926.1 Protein Homology CDS 1481990 1482370 . - 0 ID=cds-WP_011173512.1;Parent=gene-LDO09_RS07920;Dbxref=Genbank:WP_011173512.1;Name=WP_011173512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632988.1;locus_tag=LDO09_RS07920;product=cupin domain-containing protein;protein_id=WP_011173512.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1482358 1482984 . - . ID=gene-LDO09_RS07925;Name=LDO09_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07925;old_locus_tag=TthAA11_15670 NZ_AP024926.1 Protein Homology CDS 1482358 1482984 . - 0 ID=cds-WP_143586204.1;Parent=gene-LDO09_RS07925;Dbxref=Genbank:WP_143586204.1;Name=WP_143586204.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632989.1;locus_tag=LDO09_RS07925;product=phosphoribosyltransferase family protein;protein_id=WP_143586204.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1483060 1484742 . + . ID=gene-LDO09_RS07930;Name=LDO09_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07930;old_locus_tag=TthAA11_15680 NZ_AP024926.1 Protein Homology CDS 1483060 1484742 . + 0 ID=cds-WP_143586206.1;Parent=gene-LDO09_RS07930;Dbxref=Genbank:WP_143586206.1;Name=WP_143586206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632990.1;locus_tag=LDO09_RS07930;product=long-chain fatty acid--CoA ligase;protein_id=WP_143586206.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1484797 1485183 . - . ID=gene-LDO09_RS07935;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LDO09_RS07935;old_locus_tag=TthAA11_15690 NZ_AP024926.1 Protein Homology CDS 1484797 1485183 . - 0 ID=cds-WP_008632991.1;Parent=gene-LDO09_RS07935;Dbxref=Genbank:WP_008632991.1;Name=WP_008632991.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110534.1;locus_tag=LDO09_RS07935;product=30S ribosomal protein S9;protein_id=WP_008632991.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1485186 1485608 . - . ID=gene-LDO09_RS07940;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LDO09_RS07940;old_locus_tag=TthAA11_15700 NZ_AP024926.1 Protein Homology CDS 1485186 1485608 . - 0 ID=cds-WP_011173515.1;Parent=gene-LDO09_RS07940;Dbxref=Genbank:WP_011173515.1;Name=WP_011173515.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008632993.1;locus_tag=LDO09_RS07940;product=50S ribosomal protein L13;protein_id=WP_011173515.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1485719 1487371 . + . ID=gene-LDO09_RS07945;Name=LDO09_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07945;old_locus_tag=TthAA11_15710 NZ_AP024926.1 Protein Homology CDS 1485719 1487371 . + 0 ID=cds-WP_143586208.1;Parent=gene-LDO09_RS07945;Dbxref=Genbank:WP_143586208.1;Name=WP_143586208.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173516.1;locus_tag=LDO09_RS07945;product=CTP synthase;protein_id=WP_143586208.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1487368 1488405 . - . ID=gene-LDO09_RS07950;Name=LDO09_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07950;old_locus_tag=TthAA11_15720 NZ_AP024926.1 Protein Homology CDS 1487368 1488405 . - 0 ID=cds-WP_011228701.1;Parent=gene-LDO09_RS07950;Dbxref=Genbank:WP_011228701.1;Name=WP_011228701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228701.1;locus_tag=LDO09_RS07950;product=DUF815 domain-containing protein;protein_id=WP_011228701.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1488451 1488526 . - . ID=gene-LDO09_RS07955;Name=LDO09_RS07955;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS07955;old_locus_tag=TthAA11_t00380 NZ_AP024926.1 tRNAscan-SE tRNA 1488451 1488526 . - . ID=rna-LDO09_RS07955;Parent=gene-LDO09_RS07955;anticodon=(pos:complement(1488491..1488493));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS07955;product=tRNA-Lys NZ_AP024926.1 tRNAscan-SE exon 1488451 1488526 . - . ID=exon-LDO09_RS07955-1;Parent=rna-LDO09_RS07955;anticodon=(pos:complement(1488491..1488493));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS07955;product=tRNA-Lys NZ_AP024926.1 RefSeq gene 1488697 1493175 . + . ID=gene-LDO09_RS07960;Name=LDO09_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07960;old_locus_tag=TthAA11_15730 NZ_AP024926.1 Protein Homology CDS 1488697 1493175 . + 0 ID=cds-WP_143586210.1;Parent=gene-LDO09_RS07960;Dbxref=Genbank:WP_143586210.1;Name=WP_143586210.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461355.1;locus_tag=LDO09_RS07960;product=glutamate synthase-related protein;protein_id=WP_143586210.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1493389 1494006 . - . ID=gene-LDO09_RS07965;Name=LDO09_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07965;old_locus_tag=TthAA11_15740 NZ_AP024926.1 Protein Homology CDS 1493389 1494006 . - 0 ID=cds-WP_223968623.1;Parent=gene-LDO09_RS07965;Dbxref=Genbank:WP_223968623.1;Name=WP_223968623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013457057.1;locus_tag=LDO09_RS07965;product=response regulator transcription factor;protein_id=WP_223968623.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1494003 1494506 . - . ID=gene-LDO09_RS07970;Name=LDO09_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07970;old_locus_tag=TthAA11_15750 NZ_AP024926.1 Protein Homology CDS 1494003 1494506 . - 0 ID=cds-WP_223968625.1;Parent=gene-LDO09_RS07970;Dbxref=Genbank:WP_223968625.1;Name=WP_223968625.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=LDO09_RS07970;product=sensor histidine kinase;protein_id=WP_223968625.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1494545 1495386 . + . ID=gene-LDO09_RS07975;Name=LDO09_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07975 NZ_AP024926.1 Protein Homology CDS 1494545 1494899 . + 0 ID=cds-WP_223968627.1-2;Parent=gene-LDO09_RS07975;Dbxref=Genbank:WP_223968627.1;Name=WP_223968627.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336521.1;locus_tag=LDO09_RS07975;product=IS5 family transposase;protein_id=WP_223968627.1;transl_table=11 NZ_AP024926.1 Protein Homology CDS 1494899 1495386 . + 2 ID=cds-WP_223968627.1-2;Parent=gene-LDO09_RS07975;Dbxref=Genbank:WP_223968627.1;Name=WP_223968627.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336521.1;locus_tag=LDO09_RS07975;product=IS5 family transposase;protein_id=WP_223968627.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1495417 1496448 . - . ID=gene-LDO09_RS07980;Name=LDO09_RS07980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS07980;pseudo=true NZ_AP024926.1 Protein Homology CDS 1495417 1496448 . - 0 ID=cds-LDO09_RS07980;Parent=gene-LDO09_RS07980;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611120.1;locus_tag=LDO09_RS07980;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 1496414 1497559 . - . ID=gene-LDO09_RS07985;Name=LDO09_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07985;old_locus_tag=TthAA11_15800 NZ_AP024926.1 Protein Homology CDS 1496414 1497559 . - 0 ID=cds-WP_197735231.1;Parent=gene-LDO09_RS07985;Dbxref=Genbank:WP_197735231.1;Name=WP_197735231.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF019350.2;locus_tag=LDO09_RS07985;product=histidine kinase;protein_id=WP_197735231.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1497610 1498425 . - . ID=gene-LDO09_RS07990;Name=LDO09_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07990;old_locus_tag=TthAA11_15810 NZ_AP024926.1 Protein Homology CDS 1497610 1498425 . - 0 ID=cds-WP_172619196.1;Parent=gene-LDO09_RS07990;Dbxref=Genbank:WP_172619196.1;Name=WP_172619196.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024376.2;locus_tag=LDO09_RS07990;product=PhnD/SsuA/transferrin family substrate-binding protein;protein_id=WP_172619196.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1498569 1499444 . + . ID=gene-LDO09_RS07995;Name=LDO09_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS07995;old_locus_tag=TthAA11_15820 NZ_AP024926.1 Protein Homology CDS 1498569 1499444 . + 0 ID=cds-WP_143586214.1;Parent=gene-LDO09_RS07995;Dbxref=Genbank:WP_143586214.1;Name=WP_143586214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013457060.1;locus_tag=LDO09_RS07995;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_143586214.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1499457 1500692 . + . ID=gene-LDO09_RS08000;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=LDO09_RS08000;old_locus_tag=TthAA11_15830 NZ_AP024926.1 Protein Homology CDS 1499457 1500692 . + 0 ID=cds-WP_223968629.1;Parent=gene-LDO09_RS08000;Dbxref=Genbank:WP_223968629.1;Name=WP_223968629.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: protein motif:HMM:NF015851.2;locus_tag=LDO09_RS08000;product=polysulfide reductase NrfD;protein_id=WP_223968629.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1500693 1504082 . + . ID=gene-LDO09_RS08005;Name=LDO09_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08005;old_locus_tag=TthAA11_15840 NZ_AP024926.1 Protein Homology CDS 1500693 1504082 . + 0 ID=cds-WP_143586222.1;Parent=gene-LDO09_RS08005;Dbxref=Genbank:WP_143586222.1;Name=WP_143586222.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462066.1;locus_tag=LDO09_RS08005;product=molybdopterin-dependent oxidoreductase;protein_id=WP_143586222.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1504166 1504717 . + . ID=gene-LDO09_RS08010;Name=LDO09_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08010;old_locus_tag=TthAA11_15850 NZ_AP024926.1 Protein Homology CDS 1504166 1504717 . + 0 ID=cds-WP_143586224.1;Parent=gene-LDO09_RS08010;Dbxref=Genbank:WP_143586224.1;Name=WP_143586224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629227.1;locus_tag=LDO09_RS08010;product=protoglobin domain-containing protein;protein_id=WP_143586224.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1504714 1506048 . - . ID=gene-LDO09_RS08015;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=LDO09_RS08015;old_locus_tag=TthAA11_15860 NZ_AP024926.1 Protein Homology CDS 1504714 1506048 . - 0 ID=cds-WP_143586227.1;Parent=gene-LDO09_RS08015;Dbxref=Genbank:WP_143586227.1;Name=WP_143586227.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629226.1;locus_tag=LDO09_RS08015;product=replicative DNA helicase;protein_id=WP_143586227.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1506157 1507761 . + . ID=gene-LDO09_RS08020;Name=LDO09_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08020;old_locus_tag=TthAA11_15870 NZ_AP024926.1 Protein Homology CDS 1506157 1507761 . + 0 ID=cds-WP_143586229.1;Parent=gene-LDO09_RS08020;Dbxref=Genbank:WP_143586229.1;Name=WP_143586229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629225.1;locus_tag=LDO09_RS08020;product=transglycosylase SLT domain-containing protein;protein_id=WP_143586229.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1507751 1508911 . - . ID=gene-LDO09_RS08025;Name=LDO09_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08025;old_locus_tag=TthAA11_15880 NZ_AP024926.1 Protein Homology CDS 1507751 1508911 . - 0 ID=cds-WP_143586231.1;Parent=gene-LDO09_RS08025;Dbxref=Genbank:WP_143586231.1;Name=WP_143586231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629224.1;locus_tag=LDO09_RS08025;product=cation:proton antiporter;protein_id=WP_143586231.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1508911 1509363 . - . ID=gene-LDO09_RS08030;Name=LDO09_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08030;old_locus_tag=TthAA11_15890 NZ_AP024926.1 Protein Homology CDS 1508911 1509363 . - 0 ID=cds-WP_223968631.1;Parent=gene-LDO09_RS08030;Dbxref=Genbank:WP_223968631.1;Name=WP_223968631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629223.1;locus_tag=LDO09_RS08030;product=CBS domain-containing protein;protein_id=WP_223968631.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1509374 1510006 . - . ID=gene-LDO09_RS08035;Name=LDO09_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08035;old_locus_tag=TthAA11_15900 NZ_AP024926.1 Protein Homology CDS 1509374 1510006 . - 0 ID=cds-WP_143586235.1;Parent=gene-LDO09_RS08035;Dbxref=Genbank:WP_143586235.1;Name=WP_143586235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173524.1;locus_tag=LDO09_RS08035;product=rhomboid family intramembrane serine protease;protein_id=WP_143586235.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1510003 1510830 . - . ID=gene-LDO09_RS08040;Name=LDO09_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08040;old_locus_tag=TthAA11_15910 NZ_AP024926.1 Protein Homology CDS 1510003 1510830 . - 0 ID=cds-WP_143586237.1;Parent=gene-LDO09_RS08040;Dbxref=Genbank:WP_143586237.1;Name=WP_143586237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228704.1;locus_tag=LDO09_RS08040;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_143586237.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1510849 1511997 . - . ID=gene-LDO09_RS08045;Name=LDO09_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08045;old_locus_tag=TthAA11_15920 NZ_AP024926.1 Protein Homology CDS 1510849 1511997 . - 0 ID=cds-WP_143586239.1;Parent=gene-LDO09_RS08045;Dbxref=Genbank:WP_143586239.1;Name=WP_143586239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173526.1;locus_tag=LDO09_RS08045;product=cation:proton antiporter;protein_id=WP_143586239.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1511997 1512470 . - . ID=gene-LDO09_RS08050;Name=LDO09_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08050;old_locus_tag=TthAA11_15930 NZ_AP024926.1 Protein Homology CDS 1511997 1512470 . - 0 ID=cds-WP_223968633.1;Parent=gene-LDO09_RS08050;Dbxref=Genbank:WP_223968633.1;Name=WP_223968633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633044.1;locus_tag=LDO09_RS08050;product=potassium transporter TrkA;protein_id=WP_223968633.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1512467 1512925 . - . ID=gene-LDO09_RS08055;Name=LDO09_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08055;old_locus_tag=TthAA11_15940 NZ_AP024926.1 Protein Homology CDS 1512467 1512925 . - 0 ID=cds-WP_143586243.1;Parent=gene-LDO09_RS08055;Dbxref=Genbank:WP_143586243.1;Name=WP_143586243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629218.1;locus_tag=LDO09_RS08055;product=phosphate-starvation-inducible PsiE family protein;protein_id=WP_143586243.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1512888 1513328 . - . ID=gene-LDO09_RS08060;Name=LDO09_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08060;old_locus_tag=TthAA11_15950 NZ_AP024926.1 Protein Homology CDS 1512888 1513328 . - 0 ID=cds-WP_223968636.1;Parent=gene-LDO09_RS08060;Dbxref=Genbank:WP_223968636.1;Name=WP_223968636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717907.1;locus_tag=LDO09_RS08060;product=DUF1931 family protein;protein_id=WP_223968636.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1513401 1513814 . - . ID=gene-LDO09_RS08065;Name=LDO09_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08065;old_locus_tag=TthAA11_15960 NZ_AP024926.1 Protein Homology CDS 1513401 1513814 . - 0 ID=cds-WP_143586247.1;Parent=gene-LDO09_RS08065;Dbxref=Genbank:WP_143586247.1;Name=WP_143586247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228707.1;locus_tag=LDO09_RS08065;product=Hsp20/alpha crystallin family protein;protein_id=WP_143586247.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1513818 1514240 . - . ID=gene-LDO09_RS08070;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LDO09_RS08070;old_locus_tag=TthAA11_15970 NZ_AP024926.1 Protein Homology CDS 1513818 1514240 . - 0 ID=cds-WP_143586250.1;Parent=gene-LDO09_RS08070;Dbxref=Genbank:WP_143586250.1;Name=WP_143586250.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173531.1;locus_tag=LDO09_RS08070;product=thioredoxin;protein_id=WP_143586250.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1514231 1514485 . - . ID=gene-LDO09_RS08075;Name=LDO09_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08075;old_locus_tag=TthAA11_15980 NZ_AP024926.1 Protein Homology CDS 1514231 1514485 . - 0 ID=cds-WP_143586252.1;Parent=gene-LDO09_RS08075;Dbxref=Genbank:WP_143586252.1;Name=WP_143586252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633052.1;locus_tag=LDO09_RS08075;product=glutaredoxin family protein;protein_id=WP_143586252.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1514489 1515163 . - . ID=gene-LDO09_RS08080;Name=LDO09_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08080;old_locus_tag=TthAA11_15990 NZ_AP024926.1 Protein Homology CDS 1514489 1515163 . - 0 ID=cds-WP_143586254.1;Parent=gene-LDO09_RS08080;Dbxref=Genbank:WP_143586254.1;Name=WP_143586254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633054.1;locus_tag=LDO09_RS08080;product=peroxiredoxin;protein_id=WP_143586254.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1515176 1515604 . - . ID=gene-LDO09_RS08085;Name=LDO09_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08085;old_locus_tag=TthAA11_16000 NZ_AP024926.1 Protein Homology CDS 1515176 1515604 . - 0 ID=cds-WP_011173532.1;Parent=gene-LDO09_RS08085;Dbxref=Genbank:WP_011173532.1;Name=WP_011173532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173532.1;locus_tag=LDO09_RS08085;product=ferritin-like domain-containing protein;protein_id=WP_011173532.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1515675 1516361 . - . ID=gene-LDO09_RS08090;Name=LDO09_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08090;old_locus_tag=TthAA11_16010 NZ_AP024926.1 Protein Homology CDS 1515675 1516361 . - 0 ID=cds-WP_143586256.1;Parent=gene-LDO09_RS08090;Dbxref=Genbank:WP_143586256.1;Name=WP_143586256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551000.1;locus_tag=LDO09_RS08090;product=heat-stable protein;protein_id=WP_143586256.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1516374 1516787 . - . ID=gene-LDO09_RS08095;Name=LDO09_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08095;old_locus_tag=TthAA11_16020 NZ_AP024926.1 Protein Homology CDS 1516374 1516787 . - 0 ID=cds-WP_143586258.1;Parent=gene-LDO09_RS08095;Dbxref=Genbank:WP_143586258.1;Name=WP_143586258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516214.1;locus_tag=LDO09_RS08095;product=Hsp20/alpha crystallin family protein;protein_id=WP_143586258.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1516803 1517987 . - . ID=gene-LDO09_RS08100;Name=LDO09_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08100;old_locus_tag=TthAA11_16030 NZ_AP024926.1 Protein Homology CDS 1516803 1517987 . - 0 ID=cds-WP_223968638.1;Parent=gene-LDO09_RS08100;Dbxref=Genbank:WP_223968638.1;Name=WP_223968638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633059.1;locus_tag=LDO09_RS08100;product=VLRF1 family aeRF1-type release factor;protein_id=WP_223968638.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1517984 1518373 . - . ID=gene-LDO09_RS08105;Name=LDO09_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08105;old_locus_tag=TthAA11_16040 NZ_AP024926.1 Protein Homology CDS 1517984 1518373 . - 0 ID=cds-WP_223968640.1;Parent=gene-LDO09_RS08105;Dbxref=Genbank:WP_223968640.1;Name=WP_223968640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633060.1;locus_tag=LDO09_RS08105;product=rubrerythrin family protein;protein_id=WP_223968640.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1518383 1520554 . - . ID=gene-LDO09_RS08110;Name=clpB;end_range=1520554,.;gbkey=Gene;gene=clpB;gene_biotype=pseudogene;locus_tag=LDO09_RS08110;old_locus_tag=TthAA11_16050;partial=true;pseudo=true NZ_AP024926.1 Protein Homology CDS 1518383 1520554 . - 0 ID=cds-LDO09_RS08110;Parent=gene-LDO09_RS08110;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006457,GO:0016887;end_range=1520554,.;gbkey=CDS;gene=clpB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228712.1;locus_tag=LDO09_RS08110;partial=true;product=ATP-dependent chaperone ClpB;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 1520645 1521745 . + . ID=gene-LDO09_RS08115;Name=LDO09_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08115;old_locus_tag=TthAA11_16060 NZ_AP024926.1 Protein Homology CDS 1520645 1521745 . + 0 ID=cds-WP_223968574.1-3;Parent=gene-LDO09_RS08115;Dbxref=Genbank:WP_223968574.1;Name=WP_223968574.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511178.1;locus_tag=LDO09_RS08115;product=transposase;protein_id=WP_223968574.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1521748 1522143 . - . ID=gene-LDO09_RS08120;Name=LDO09_RS08120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS08120;partial=true;pseudo=true;start_range=.,1521748 NZ_AP024926.1 Protein Homology CDS 1521748 1522143 . - 0 ID=cds-LDO09_RS08120;Parent=gene-LDO09_RS08120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228712.1;locus_tag=LDO09_RS08120;partial=true;product=type VI secretion system ATPase TssH;pseudo=true;start_range=.,1521748;transl_table=11 NZ_AP024926.1 RefSeq gene 1522295 1522531 . - . ID=gene-LDO09_RS08125;Name=LDO09_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08125;old_locus_tag=TthAA11_16070 NZ_AP024926.1 Protein Homology CDS 1522295 1522531 . - 0 ID=cds-WP_011173538.1;Parent=gene-LDO09_RS08125;Dbxref=Genbank:WP_011173538.1;Name=WP_011173538.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629208.1;locus_tag=LDO09_RS08125;product=MerR family transcriptional regulator;protein_id=WP_011173538.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1522518 1523360 . - . ID=gene-LDO09_RS08130;Name=dnaJ2;gbkey=Gene;gene=dnaJ2;gene_biotype=protein_coding;locus_tag=LDO09_RS08130;old_locus_tag=TthAA11_16080 NZ_AP024926.1 Protein Homology CDS 1522518 1523360 . - 0 ID=cds-WP_143586264.1;Parent=gene-LDO09_RS08130;Dbxref=Genbank:WP_143586264.1;Name=WP_143586264.1;gbkey=CDS;gene=dnaJ2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228713.1;locus_tag=LDO09_RS08130;product=molecular chaperone DnaJ2;protein_id=WP_143586264.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1523364 1523897 . - . ID=gene-LDO09_RS08135;Name=gprE;gbkey=Gene;gene=gprE;gene_biotype=protein_coding;locus_tag=LDO09_RS08135;old_locus_tag=TthAA11_16090 NZ_AP024926.1 Protein Homology CDS 1523364 1523897 . - 0 ID=cds-WP_014629206.1;Parent=gene-LDO09_RS08135;Dbxref=Genbank:WP_014629206.1;Name=WP_014629206.1;gbkey=CDS;gene=gprE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228714.1;locus_tag=LDO09_RS08135;product=nucleotide exchange factor GrpE;protein_id=WP_014629206.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1523951 1525798 . - . ID=gene-LDO09_RS08140;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LDO09_RS08140;old_locus_tag=TthAA11_16100 NZ_AP024926.1 Protein Homology CDS 1523951 1525798 . - 0 ID=cds-WP_143586266.1;Parent=gene-LDO09_RS08140;Dbxref=Genbank:WP_143586266.1;Name=WP_143586266.1;Ontology_term=GO:0006457,GO:0006950,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173541.1;locus_tag=LDO09_RS08140;product=molecular chaperone DnaK;protein_id=WP_143586266.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1525933 1527807 . + . ID=gene-LDO09_RS08145;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LDO09_RS08145;old_locus_tag=TthAA11_16110 NZ_AP024926.1 Protein Homology CDS 1525933 1527807 . + 0 ID=cds-WP_014629204.1;Parent=gene-LDO09_RS08145;Dbxref=Genbank:WP_014629204.1;Name=WP_014629204.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173542.1;locus_tag=LDO09_RS08145;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_014629204.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1527850 1529007 . - . ID=gene-LDO09_RS08150;Name=LDO09_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08150;old_locus_tag=TthAA11_16120 NZ_AP024926.1 Protein Homology CDS 1527850 1529007 . - 0 ID=cds-WP_143586268.1;Parent=gene-LDO09_RS08150;Dbxref=Genbank:WP_143586268.1;Name=WP_143586268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629203.1;locus_tag=LDO09_RS08150;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_143586268.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1529028 1529933 . + . ID=gene-LDO09_RS08155;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=LDO09_RS08155;old_locus_tag=TthAA11_16130 NZ_AP024926.1 Protein Homology CDS 1529028 1529933 . + 0 ID=cds-WP_223968642.1;Parent=gene-LDO09_RS08155;Dbxref=Genbank:WP_223968642.1;Name=WP_223968642.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173544.1;locus_tag=LDO09_RS08155;product=signal peptide peptidase SppA;protein_id=WP_223968642.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1529927 1530337 . + . ID=gene-LDO09_RS08160;Name=LDO09_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08160;old_locus_tag=TthAA11_16140 NZ_AP024926.1 Protein Homology CDS 1529927 1530337 . + 0 ID=cds-WP_223968644.1;Parent=gene-LDO09_RS08160;Dbxref=Genbank:WP_223968644.1;Name=WP_223968644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633066.1;locus_tag=LDO09_RS08160;product=RDD family protein;protein_id=WP_223968644.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1530415 1531299 . - . ID=gene-LDO09_RS08165;Name=rocF;gbkey=Gene;gene=rocF;gene_biotype=protein_coding;locus_tag=LDO09_RS08165;old_locus_tag=TthAA11_16150 NZ_AP024926.1 Protein Homology CDS 1530415 1531299 . - 0 ID=cds-WP_008633067.1;Parent=gene-LDO09_RS08165;Dbxref=Genbank:WP_008633067.1;Name=WP_008633067.1;Ontology_term=GO:0019547,GO:0004053;gbkey=CDS;gene=rocF;go_function=arginase activity|0004053||IEA;go_process=arginine catabolic process to ornithine|0019547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633067.1;locus_tag=LDO09_RS08165;product=arginase;protein_id=WP_008633067.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1531343 1531717 . - . ID=gene-LDO09_RS08170;Name=LDO09_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08170;old_locus_tag=TthAA11_16160 NZ_AP024926.1 Protein Homology CDS 1531343 1531717 . - 0 ID=cds-WP_223968646.1;Parent=gene-LDO09_RS08170;Dbxref=Genbank:WP_223968646.1;Name=WP_223968646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510670.1;locus_tag=LDO09_RS08170;product=M67 family metallopeptidase;protein_id=WP_223968646.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1531788 1533764 . + . ID=gene-LDO09_RS08175;Name=LDO09_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08175;old_locus_tag=TthAA11_16170 NZ_AP024926.1 Protein Homology CDS 1531788 1533764 . + 0 ID=cds-WP_223968648.1;Parent=gene-LDO09_RS08175;Dbxref=Genbank:WP_223968648.1;Name=WP_223968648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633072.1;locus_tag=LDO09_RS08175;product=elongation factor G;protein_id=WP_223968648.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1533765 1534655 . + . ID=gene-LDO09_RS08180;Name=LDO09_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08180;old_locus_tag=TthAA11_16180 NZ_AP024926.1 Protein Homology CDS 1533765 1534655 . + 0 ID=cds-WP_143586276.1;Parent=gene-LDO09_RS08180;Dbxref=Genbank:WP_143586276.1;Name=WP_143586276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629198.1;locus_tag=LDO09_RS08180;product=AAA family ATPase;protein_id=WP_143586276.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1534652 1537045 . + . ID=gene-LDO09_RS08185;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LDO09_RS08185;old_locus_tag=TthAA11_16190 NZ_AP024926.1 Protein Homology CDS 1534652 1537045 . + 0 ID=cds-WP_223965666.1;Parent=gene-LDO09_RS08185;Dbxref=Genbank:WP_223965666.1;Name=WP_223965666.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228720.1;locus_tag=LDO09_RS08185;product=phosphoenolpyruvate synthase;protein_id=WP_223965666.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1537054 1537671 . + . ID=gene-LDO09_RS08190;Name=LDO09_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08190;old_locus_tag=TthAA11_16200 NZ_AP024926.1 Protein Homology CDS 1537054 1537671 . + 0 ID=cds-WP_223968650.1;Parent=gene-LDO09_RS08190;Dbxref=Genbank:WP_223968650.1;Name=WP_223968650.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228721.1;locus_tag=LDO09_RS08190;product=hemolysin III family protein;protein_id=WP_223968650.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1537705 1538379 . + . ID=gene-LDO09_RS08195;Name=LDO09_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08195;old_locus_tag=TthAA11_16210 NZ_AP024926.1 Protein Homology CDS 1537705 1538379 . + 0 ID=cds-WP_143586280.1;Parent=gene-LDO09_RS08195;Dbxref=Genbank:WP_143586280.1;Name=WP_143586280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550846.1;locus_tag=LDO09_RS08195;product=response regulator transcription factor;protein_id=WP_143586280.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1538401 1539807 . + . ID=gene-LDO09_RS08200;Name=LDO09_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08200;old_locus_tag=TthAA11_16220 NZ_AP024926.1 Protein Homology CDS 1538401 1539807 . + 0 ID=cds-WP_143586283.1;Parent=gene-LDO09_RS08200;Dbxref=Genbank:WP_143586283.1;Name=WP_143586283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173552.1;locus_tag=LDO09_RS08200;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_143586283.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1539761 1540129 . - . ID=gene-LDO09_RS08205;Name=LDO09_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08205;old_locus_tag=TthAA11_16230 NZ_AP024926.1 Protein Homology CDS 1539761 1540129 . - 0 ID=cds-WP_124104148.1;Parent=gene-LDO09_RS08205;Dbxref=Genbank:WP_124104148.1;Name=WP_124104148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718031.1;locus_tag=LDO09_RS08205;product=DUF2089 domain-containing protein;protein_id=WP_124104148.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1540123 1540380 . - . ID=gene-LDO09_RS08210;Name=LDO09_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08210;old_locus_tag=TthAA11_16240 NZ_AP024926.1 Protein Homology CDS 1540123 1540380 . - 0 ID=cds-WP_143586285.1;Parent=gene-LDO09_RS08210;Dbxref=Genbank:WP_143586285.1;Name=WP_143586285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111365.1;locus_tag=LDO09_RS08210;product=hypothetical protein;protein_id=WP_143586285.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1540377 1540745 . - . ID=gene-LDO09_RS08215;Name=LDO09_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08215;old_locus_tag=TthAA11_16250 NZ_AP024926.1 Protein Homology CDS 1540377 1540745 . - 0 ID=cds-WP_014510677.1;Parent=gene-LDO09_RS08215;Dbxref=Genbank:WP_014510677.1;Name=WP_014510677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633080.1;locus_tag=LDO09_RS08215;product=hypothetical protein;protein_id=WP_014510677.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1540813 1541559 . - . ID=gene-LDO09_RS08220;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=LDO09_RS08220;old_locus_tag=TthAA11_16260 NZ_AP024926.1 Protein Homology CDS 1540813 1541559 . - 0 ID=cds-WP_011173554.1;Parent=gene-LDO09_RS08220;Dbxref=Genbank:WP_011173554.1;Name=WP_011173554.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173554.1;locus_tag=LDO09_RS08220;product=cytochrome c biogenesis protein CcsA;protein_id=WP_011173554.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1541556 1542728 . - . ID=gene-LDO09_RS08225;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LDO09_RS08225;old_locus_tag=TthAA11_16270 NZ_AP024926.1 Protein Homology CDS 1541556 1542728 . - 0 ID=cds-WP_143586287.1;Parent=gene-LDO09_RS08225;Dbxref=Genbank:WP_143586287.1;Name=WP_143586287.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510679.1;locus_tag=LDO09_RS08225;product=glutamyl-tRNA reductase;protein_id=WP_143586287.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1542771 1543451 . - . ID=gene-LDO09_RS08230;Name=LDO09_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08230;old_locus_tag=TthAA11_16280 NZ_AP024926.1 Protein Homology CDS 1542771 1543451 . - 0 ID=cds-WP_143586289.1;Parent=gene-LDO09_RS08230;Dbxref=Genbank:WP_143586289.1;Name=WP_143586289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629193.1;locus_tag=LDO09_RS08230;product=uroporphyrinogen-III synthase;protein_id=WP_143586289.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1543423 1543788 . - . ID=gene-LDO09_RS08235;Name=LDO09_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08235;old_locus_tag=TthAA11_16290 NZ_AP024926.1 Protein Homology CDS 1543423 1543788 . - 0 ID=cds-WP_143586291.1;Parent=gene-LDO09_RS08235;Dbxref=Genbank:WP_143586291.1;Name=WP_143586291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633088.1;locus_tag=LDO09_RS08235;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_143586291.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1543785 1544444 . - . ID=gene-LDO09_RS08240;Name=LDO09_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08240;old_locus_tag=TthAA11_16300 NZ_AP024926.1 Protein Homology CDS 1543785 1544444 . - 0 ID=cds-WP_223968652.1;Parent=gene-LDO09_RS08240;Dbxref=Genbank:WP_223968652.1;Name=WP_223968652.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629191.1;locus_tag=LDO09_RS08240;product=HAD family hydrolase;protein_id=WP_223968652.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1544525 1545088 . + . ID=gene-LDO09_RS08245;Name=LDO09_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08245;old_locus_tag=TthAA11_16310 NZ_AP024926.1 Protein Homology CDS 1544525 1545088 . + 0 ID=cds-WP_223968654.1;Parent=gene-LDO09_RS08245;Dbxref=Genbank:WP_223968654.1;Name=WP_223968654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629190.1;locus_tag=LDO09_RS08245;product=YceI family protein;protein_id=WP_223968654.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1545088 1545669 . + . ID=gene-LDO09_RS08250;Name=LDO09_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08250;old_locus_tag=TthAA11_16320 NZ_AP024926.1 Protein Homology CDS 1545088 1545669 . + 0 ID=cds-WP_223969137.1;Parent=gene-LDO09_RS08250;Dbxref=Genbank:WP_223969137.1;Name=WP_223969137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718042.1;locus_tag=LDO09_RS08250;product=catechol 1%2C2-dioxygenase;protein_id=WP_223969137.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1545684 1546994 . + . ID=gene-LDO09_RS08255;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LDO09_RS08255;old_locus_tag=TthAA11_16330 NZ_AP024926.1 Protein Homology CDS 1545684 1546994 . + 0 ID=cds-WP_223968656.1;Parent=gene-LDO09_RS08255;Dbxref=Genbank:WP_223968656.1;Name=WP_223968656.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633095.1;locus_tag=LDO09_RS08255;product=adenylosuccinate lyase;protein_id=WP_223968656.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1547004 1547231 . + . ID=gene-LDO09_RS08260;Name=LDO09_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08260;old_locus_tag=TthAA11_16340 NZ_AP024926.1 Protein Homology CDS 1547004 1547231 . + 0 ID=cds-WP_008633096.1;Parent=gene-LDO09_RS08260;Dbxref=Genbank:WP_008633096.1;Name=WP_008633096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629186.1;locus_tag=LDO09_RS08260;product=DUF433 domain-containing protein;protein_id=WP_008633096.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1547228 1547455 . + . ID=gene-LDO09_RS08265;Name=LDO09_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08265;old_locus_tag=TthAA11_16350 NZ_AP024926.1 Protein Homology CDS 1547228 1547455 . + 0 ID=cds-WP_143586302.1;Parent=gene-LDO09_RS08265;Dbxref=Genbank:WP_143586302.1;Name=WP_143586302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633097.1;locus_tag=LDO09_RS08265;product=DUF5615 family PIN-like protein;protein_id=WP_143586302.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1547489 1548178 . + . ID=gene-LDO09_RS08270;Name=LDO09_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08270;old_locus_tag=TthAA11_16360 NZ_AP024926.1 Protein Homology CDS 1547489 1548178 . + 0 ID=cds-WP_143586304.1;Parent=gene-LDO09_RS08270;Dbxref=Genbank:WP_143586304.1;Name=WP_143586304.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173562.1;locus_tag=LDO09_RS08270;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_143586304.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1548190 1548444 . + . ID=gene-LDO09_RS08275;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=LDO09_RS08275;old_locus_tag=TthAA11_16370 NZ_AP024926.1 Protein Homology CDS 1548190 1548444 . + 0 ID=cds-WP_223968658.1;Parent=gene-LDO09_RS08275;Dbxref=Genbank:WP_223968658.1;Name=WP_223968658.1;Ontology_term=GO:0009152,GO:0004642;gbkey=CDS;gene=purS;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173563.1;locus_tag=LDO09_RS08275;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_223968658.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1548441 1549124 . + . ID=gene-LDO09_RS08280;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=LDO09_RS08280;old_locus_tag=TthAA11_16380 NZ_AP024926.1 Protein Homology CDS 1548441 1549124 . + 0 ID=cds-WP_143586309.1;Parent=gene-LDO09_RS08280;Dbxref=Genbank:WP_143586309.1;Name=WP_143586309.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228731.1;locus_tag=LDO09_RS08280;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_143586309.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1549121 1549834 . + . ID=gene-LDO09_RS08285;Name=LDO09_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08285;old_locus_tag=TthAA11_16390 NZ_AP024926.1 Protein Homology CDS 1549121 1549834 . + 0 ID=cds-WP_060384215.1;Parent=gene-LDO09_RS08285;Dbxref=Genbank:WP_060384215.1;Name=WP_060384215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173565.1;locus_tag=LDO09_RS08285;product=HAD family hydrolase;protein_id=WP_060384215.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1549834 1552011 . + . ID=gene-LDO09_RS08290;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=LDO09_RS08290;old_locus_tag=TthAA11_16400 NZ_AP024926.1 Protein Homology CDS 1549834 1552011 . + 0 ID=cds-WP_143586311.1;Parent=gene-LDO09_RS08290;Dbxref=Genbank:WP_143586311.1;Name=WP_143586311.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633102.1;locus_tag=LDO09_RS08290;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_143586311.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1552004 1553395 . + . ID=gene-LDO09_RS08295;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LDO09_RS08295;old_locus_tag=TthAA11_16410 NZ_AP024926.1 Protein Homology CDS 1552004 1553395 . + 0 ID=cds-WP_143586313.1;Parent=gene-LDO09_RS08295;Dbxref=Genbank:WP_143586313.1;Name=WP_143586313.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633103.1;locus_tag=LDO09_RS08295;product=amidophosphoribosyltransferase;protein_id=WP_143586313.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1553381 1554388 . - . ID=gene-LDO09_RS08300;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=LDO09_RS08300;old_locus_tag=TthAA11_16420 NZ_AP024926.1 Protein Homology CDS 1553381 1554388 . - 0 ID=cds-WP_172619198.1;Parent=gene-LDO09_RS08300;Dbxref=Genbank:WP_172619198.1;Name=WP_172619198.1;Ontology_term=GO:0008033,GO:0003723,GO:0008168;gbkey=CDS;gene=trmN;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173568.1;locus_tag=LDO09_RS08300;product=tRNA (guanine(6)-N2)-methyltransferase;protein_id=WP_172619198.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1554378 1555985 . - . ID=gene-LDO09_RS08305;Name=LDO09_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08305;old_locus_tag=TthAA11_16430 NZ_AP024926.1 Protein Homology CDS 1554378 1555985 . - 0 ID=cds-WP_143586315.1;Parent=gene-LDO09_RS08305;Dbxref=Genbank:WP_143586315.1;Name=WP_143586315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228733.1;locus_tag=LDO09_RS08305;product=dynamin family protein;protein_id=WP_143586315.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1555966 1556226 . - . ID=gene-LDO09_RS08310;Name=LDO09_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08310;old_locus_tag=TthAA11_16440 NZ_AP024926.1 Protein Homology CDS 1555966 1556226 . - 0 ID=cds-WP_014510689.1;Parent=gene-LDO09_RS08310;Dbxref=Genbank:WP_014510689.1;Name=WP_014510689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510689.1;locus_tag=LDO09_RS08310;product=hypothetical protein;protein_id=WP_014510689.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1556257 1557480 . + . ID=gene-LDO09_RS08315;Name=LDO09_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08315;old_locus_tag=TthAA11_16450 NZ_AP024926.1 Protein Homology CDS 1556257 1557480 . + 0 ID=cds-WP_011228734.1;Parent=gene-LDO09_RS08315;Dbxref=Genbank:WP_011228734.1;Name=WP_011228734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633107.1;locus_tag=LDO09_RS08315;product=serine hydroxymethyltransferase;protein_id=WP_011228734.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1557505 1559091 . + . ID=gene-LDO09_RS08320;Name=LDO09_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08320;old_locus_tag=TthAA11_16460 NZ_AP024926.1 Protein Homology CDS 1557505 1559091 . + 0 ID=cds-WP_143586317.1;Parent=gene-LDO09_RS08320;Dbxref=Genbank:WP_143586317.1;Name=WP_143586317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228735.1;locus_tag=LDO09_RS08320;product=AAA family ATPase;protein_id=WP_143586317.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1559103 1559963 . + . ID=gene-LDO09_RS08325;Name=LDO09_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08325;old_locus_tag=TthAA11_16470 NZ_AP024926.1 Protein Homology CDS 1559103 1559963 . + 0 ID=cds-WP_143586319.1;Parent=gene-LDO09_RS08325;Dbxref=Genbank:WP_143586319.1;Name=WP_143586319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510692.1;locus_tag=LDO09_RS08325;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_143586319.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1559954 1560910 . - . ID=gene-LDO09_RS08330;Name=LDO09_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08330;old_locus_tag=TthAA11_16480 NZ_AP024926.1 Protein Homology CDS 1559954 1560910 . - 0 ID=cds-WP_143586321.1;Parent=gene-LDO09_RS08330;Dbxref=Genbank:WP_143586321.1;Name=WP_143586321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633111.1;locus_tag=LDO09_RS08330;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_143586321.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1560971 1561366 . - . ID=gene-LDO09_RS08335;Name=LDO09_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08335;old_locus_tag=TthAA11_16490 NZ_AP024926.1 Protein Homology CDS 1560971 1561366 . - 0 ID=cds-WP_096411876.1;Parent=gene-LDO09_RS08335;Dbxref=Genbank:WP_096411876.1;Name=WP_096411876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328609.1;locus_tag=LDO09_RS08335;product=DUF3197 domain-containing protein;protein_id=WP_096411876.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1561383 1561871 . - . ID=gene-LDO09_RS08340;Name=LDO09_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08340;old_locus_tag=TthAA11_16500 NZ_AP024926.1 Protein Homology CDS 1561383 1561871 . - 0 ID=cds-WP_143586323.1;Parent=gene-LDO09_RS08340;Dbxref=Genbank:WP_143586323.1;Name=WP_143586323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629174.1;locus_tag=LDO09_RS08340;product=DinB family protein;protein_id=WP_143586323.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1561890 1562519 . + . ID=gene-LDO09_RS08345;Name=LDO09_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08345;old_locus_tag=TthAA11_16510 NZ_AP024926.1 Protein Homology CDS 1561890 1562519 . + 0 ID=cds-WP_143586325.1;Parent=gene-LDO09_RS08345;Dbxref=Genbank:WP_143586325.1;Name=WP_143586325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173577.1;locus_tag=LDO09_RS08345;product=YkgJ family cysteine cluster protein;protein_id=WP_143586325.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1562469 1563539 . - . ID=gene-LDO09_RS08350;Name=LDO09_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08350;old_locus_tag=TthAA11_16520 NZ_AP024926.1 Protein Homology CDS 1562469 1563539 . - 0 ID=cds-WP_143586326.1;Parent=gene-LDO09_RS08350;Dbxref=Genbank:WP_143586326.1;Name=WP_143586326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173578.1;locus_tag=LDO09_RS08350;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_143586326.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1563554 1565266 . - . ID=gene-LDO09_RS08355;Name=LDO09_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08355;old_locus_tag=TthAA11_16530 NZ_AP024926.1 Protein Homology CDS 1563554 1565266 . - 0 ID=cds-WP_223968660.1;Parent=gene-LDO09_RS08355;Dbxref=Genbank:WP_223968660.1;Name=WP_223968660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046045.1;locus_tag=LDO09_RS08355;product=M3 family oligoendopeptidase;protein_id=WP_223968660.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1565289 1565618 . - . ID=gene-LDO09_RS08360;Name=LDO09_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08360;old_locus_tag=TthAA11_16540 NZ_AP024926.1 Protein Homology CDS 1565289 1565618 . - 0 ID=cds-WP_143586330.1;Parent=gene-LDO09_RS08360;Dbxref=Genbank:WP_143586330.1;Name=WP_143586330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013159160.1;locus_tag=LDO09_RS08360;product=cupredoxin domain-containing protein;protein_id=WP_143586330.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1565679 1566458 . - . ID=gene-LDO09_RS08365;Name=LDO09_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08365;old_locus_tag=TthAA11_16550 NZ_AP024926.1 Protein Homology CDS 1565679 1566458 . - 0 ID=cds-WP_143586332.1;Parent=gene-LDO09_RS08365;Dbxref=Genbank:WP_143586332.1;Name=WP_143586332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013159158.1;locus_tag=LDO09_RS08365;product=cupin domain-containing protein;protein_id=WP_143586332.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1566584 1567231 . - . ID=gene-LDO09_RS08370;Name=LDO09_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08370;old_locus_tag=TthAA11_16560 NZ_AP024926.1 Protein Homology CDS 1566584 1567231 . - 0 ID=cds-WP_143586334.1;Parent=gene-LDO09_RS08370;Dbxref=Genbank:WP_143586334.1;Name=WP_143586334.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461218.1;locus_tag=LDO09_RS08370;product=anti-sigma factor;protein_id=WP_143586334.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1567228 1567746 . - . ID=gene-LDO09_RS08375;Name=LDO09_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08375;old_locus_tag=TthAA11_16570 NZ_AP024926.1 Protein Homology CDS 1567228 1567746 . - 0 ID=cds-WP_143586336.1;Parent=gene-LDO09_RS08375;Dbxref=Genbank:WP_143586336.1;Name=WP_143586336.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461931.1;locus_tag=LDO09_RS08375;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_143586336.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1567789 1569588 . + . ID=gene-LDO09_RS08380;Name=LDO09_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08380;old_locus_tag=TthAA11_16580 NZ_AP024926.1 Protein Homology CDS 1567789 1569588 . + 0 ID=cds-WP_143586338.1;Parent=gene-LDO09_RS08380;Dbxref=Genbank:WP_143586338.1;Name=WP_143586338.1;Ontology_term=GO:0003723,GO:0004540;gbkey=CDS;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173582.1;locus_tag=LDO09_RS08380;product=RNB domain-containing ribonuclease;protein_id=WP_143586338.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1569589 1570866 . - . ID=gene-LDO09_RS08385;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=LDO09_RS08385;old_locus_tag=TthAA11_16590 NZ_AP024926.1 Protein Homology CDS 1569589 1570866 . - 0 ID=cds-WP_143586340.1;Parent=gene-LDO09_RS08385;Dbxref=Genbank:WP_143586340.1;Name=WP_143586340.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717730.1;locus_tag=LDO09_RS08385;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_143586340.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1570931 1572043 . + . ID=gene-LDO09_RS08390;Name=LDO09_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08390;old_locus_tag=TthAA11_16600 NZ_AP024926.1 Protein Homology CDS 1570931 1572043 . + 0 ID=cds-WP_143586342.1;Parent=gene-LDO09_RS08390;Dbxref=Genbank:WP_143586342.1;Name=WP_143586342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629168.1;locus_tag=LDO09_RS08390;product=FAD-dependent oxidoreductase;protein_id=WP_143586342.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1572161 1572237 . + . ID=gene-LDO09_RS08395;Name=LDO09_RS08395;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS08395;old_locus_tag=TthAA11_t00390 NZ_AP024926.1 tRNAscan-SE tRNA 1572161 1572237 . + . ID=rna-LDO09_RS08395;Parent=gene-LDO09_RS08395;anticodon=(pos:1572195..1572197);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS08395;product=tRNA-Met NZ_AP024926.1 tRNAscan-SE exon 1572161 1572237 . + . ID=exon-LDO09_RS08395-1;Parent=rna-LDO09_RS08395;anticodon=(pos:1572195..1572197);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS08395;product=tRNA-Met NZ_AP024926.1 RefSeq gene 1572284 1573807 . + . ID=gene-LDO09_RS08400;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LDO09_RS08400;old_locus_tag=TthAA11_16610 NZ_AP024926.1 Protein Homology CDS 1572284 1573807 . + 0 ID=cds-WP_143586354.1;Parent=gene-LDO09_RS08400;Dbxref=Genbank:WP_143586354.1;Name=WP_143586354.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228750.1;locus_tag=LDO09_RS08400;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_143586354.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1573786 1573877 . + . ID=gene-LDO09_RS08405;Name=LDO09_RS08405;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS08405;old_locus_tag=TthAA11_t00400 NZ_AP024926.1 tRNAscan-SE tRNA 1573786 1573877 . + . ID=rna-LDO09_RS08405;Parent=gene-LDO09_RS08405;anticodon=(pos:1573820..1573822);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS08405;product=tRNA-Ser NZ_AP024926.1 tRNAscan-SE exon 1573786 1573877 . + . ID=exon-LDO09_RS08405-1;Parent=rna-LDO09_RS08405;anticodon=(pos:1573820..1573822);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS08405;product=tRNA-Ser NZ_AP024926.1 RefSeq gene 1573949 1574389 . - . ID=gene-LDO09_RS08410;Name=LDO09_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08410;old_locus_tag=TthAA11_16620 NZ_AP024926.1 Protein Homology CDS 1573949 1574389 . - 0 ID=cds-WP_143586356.1;Parent=gene-LDO09_RS08410;Dbxref=Genbank:WP_143586356.1;Name=WP_143586356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629166.1;locus_tag=LDO09_RS08410;product=hypothetical protein;protein_id=WP_143586356.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1574386 1574781 . - . ID=gene-LDO09_RS08415;Name=LDO09_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08415;old_locus_tag=TthAA11_16630 NZ_AP024926.1 Protein Homology CDS 1574386 1574781 . - 0 ID=cds-WP_143586359.1;Parent=gene-LDO09_RS08415;Dbxref=Genbank:WP_143586359.1;Name=WP_143586359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228752.1;locus_tag=LDO09_RS08415;product=alpha/beta hydrolase;protein_id=WP_143586359.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1574778 1575410 . - . ID=gene-LDO09_RS08420;Name=LDO09_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08420;old_locus_tag=TthAA11_16640 NZ_AP024926.1 Protein Homology CDS 1574778 1575410 . - 0 ID=cds-WP_165739092.1;Parent=gene-LDO09_RS08420;Dbxref=Genbank:WP_165739092.1;Name=WP_165739092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629165.1;locus_tag=LDO09_RS08420;product=alpha/beta hydrolase;protein_id=WP_165739092.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1575432 1575845 . + . ID=gene-LDO09_RS08425;Name=LDO09_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08425;old_locus_tag=TthAA11_16650 NZ_AP024926.1 Protein Homology CDS 1575432 1575845 . + 0 ID=cds-WP_143586361.1;Parent=gene-LDO09_RS08425;Dbxref=Genbank:WP_143586361.1;Name=WP_143586361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173591.1;locus_tag=LDO09_RS08425;product=PaaI family thioesterase;protein_id=WP_143586361.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1575819 1576781 . - . ID=gene-LDO09_RS08430;Name=LDO09_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08430;old_locus_tag=TthAA11_16660 NZ_AP024926.1 Protein Homology CDS 1575819 1576781 . - 0 ID=cds-WP_143586363.1;Parent=gene-LDO09_RS08430;Dbxref=Genbank:WP_143586363.1;Name=WP_143586363.1;Ontology_term=GO:0006508,GO:0070573;gbkey=CDS;go_function=metallodipeptidase activity|0070573||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510704.1;locus_tag=LDO09_RS08430;product=membrane dipeptidase;protein_id=WP_143586363.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1576796 1578577 . + . ID=gene-LDO09_RS08435;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LDO09_RS08435;old_locus_tag=TthAA11_16670 NZ_AP024926.1 Protein Homology CDS 1576796 1578577 . + 0 ID=cds-WP_223968662.1;Parent=gene-LDO09_RS08435;Dbxref=Genbank:WP_223968662.1;Name=WP_223968662.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629162.1;locus_tag=LDO09_RS08435;product=excinuclease ABC subunit UvrC;protein_id=WP_223968662.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1578628 1579551 . - . ID=gene-LDO09_RS08440;Name=LDO09_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08440;old_locus_tag=TthAA11_16680 NZ_AP024926.1 Protein Homology CDS 1578628 1579551 . - 0 ID=cds-WP_223968665.1;Parent=gene-LDO09_RS08440;Dbxref=Genbank:WP_223968665.1;Name=WP_223968665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633161.1;locus_tag=LDO09_RS08440;product=ribose-phosphate pyrophosphokinase;protein_id=WP_223968665.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1579566 1580228 . - . ID=gene-LDO09_RS08445;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=LDO09_RS08445;old_locus_tag=TthAA11_16690 NZ_AP024926.1 Protein Homology CDS 1579566 1580228 . - 0 ID=cds-WP_143586367.1;Parent=gene-LDO09_RS08445;Dbxref=Genbank:WP_143586367.1;Name=WP_143586367.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228756.1;locus_tag=LDO09_RS08445;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_143586367.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1580225 1580692 . - . ID=gene-LDO09_RS08450;Name=LDO09_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08450;old_locus_tag=TthAA11_16700 NZ_AP024926.1 Protein Homology CDS 1580225 1580692 . - 0 ID=cds-WP_143586369.1;Parent=gene-LDO09_RS08450;Dbxref=Genbank:WP_143586369.1;Name=WP_143586369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629160.1;locus_tag=LDO09_RS08450;product=S-ribosylhomocysteine lyase;protein_id=WP_143586369.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1580731 1581558 . + . ID=gene-LDO09_RS08455;Name=LDO09_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08455;old_locus_tag=TthAA11_16710 NZ_AP024926.1 Protein Homology CDS 1580731 1581558 . + 0 ID=cds-WP_143586371.1;Parent=gene-LDO09_RS08455;Dbxref=Genbank:WP_143586371.1;Name=WP_143586371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633166.1;locus_tag=LDO09_RS08455;product=KaiC domain-containing protein;protein_id=WP_143586371.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1581603 1582214 . + . ID=gene-LDO09_RS08460;Name=LDO09_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08460;old_locus_tag=TthAA11_16720 NZ_AP024926.1 Protein Homology CDS 1581603 1582214 . + 0 ID=cds-WP_014510710.1;Parent=gene-LDO09_RS08460;Dbxref=Genbank:WP_014510710.1;Name=WP_014510710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633168.1;locus_tag=LDO09_RS08460;product=circadian clock protein KaiC;protein_id=WP_014510710.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1582227 1583738 . + . ID=gene-LDO09_RS08465;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LDO09_RS08465;old_locus_tag=TthAA11_16730 NZ_AP024926.1 Protein Homology CDS 1582227 1583738 . + 0 ID=cds-WP_143586373.1;Parent=gene-LDO09_RS08465;Dbxref=Genbank:WP_143586373.1;Name=WP_143586373.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717812.1;locus_tag=LDO09_RS08465;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_143586373.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1583738 1584301 . + . ID=gene-LDO09_RS08470;Name=LDO09_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08470;old_locus_tag=TthAA11_16740 NZ_AP024926.1 Protein Homology CDS 1583738 1584301 . + 0 ID=cds-WP_172619201.1;Parent=gene-LDO09_RS08470;Dbxref=Genbank:WP_172619201.1;Name=WP_172619201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173599.1;locus_tag=LDO09_RS08470;product=Uma2 family endonuclease;protein_id=WP_172619201.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1584326 1584613 . + . ID=gene-LDO09_RS08475;Name=LDO09_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08475;old_locus_tag=TthAA11_16750 NZ_AP024926.1 Protein Homology CDS 1584326 1584613 . + 0 ID=cds-WP_143586377.1;Parent=gene-LDO09_RS08475;Dbxref=Genbank:WP_143586377.1;Name=WP_143586377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228759.1;locus_tag=LDO09_RS08475;product=glutamine synthetase/cystathionine beta-lyase binding protein;protein_id=WP_143586377.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1584613 1584999 . + . ID=gene-LDO09_RS08480;Name=LDO09_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08480;old_locus_tag=TthAA11_16760 NZ_AP024926.1 Protein Homology CDS 1584613 1584999 . + 0 ID=cds-WP_223968667.1;Parent=gene-LDO09_RS08480;Dbxref=Genbank:WP_223968667.1;Name=WP_223968667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510713.1;locus_tag=LDO09_RS08480;product=VOC family protein;protein_id=WP_223968667.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1584996 1585496 . + . ID=gene-LDO09_RS08485;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LDO09_RS08485;old_locus_tag=TthAA11_16770 NZ_AP024926.1 Protein Homology CDS 1584996 1585496 . + 0 ID=cds-WP_223968669.1;Parent=gene-LDO09_RS08485;Dbxref=Genbank:WP_223968669.1;Name=WP_223968669.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228761.1;locus_tag=LDO09_RS08485;product=ribonuclease HI;protein_id=WP_223968669.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1585515 1587176 . + . ID=gene-LDO09_RS08490;Name=LDO09_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08490;old_locus_tag=TthAA11_16780 NZ_AP024926.1 Protein Homology CDS 1585515 1587176 . + 0 ID=cds-WP_143586385.1;Parent=gene-LDO09_RS08490;Dbxref=Genbank:WP_143586385.1;Name=WP_143586385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228762.1;locus_tag=LDO09_RS08490;product=acyl-CoA carboxylase subunit beta;protein_id=WP_143586385.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1587173 1587784 . - . ID=gene-LDO09_RS08495;Name=LDO09_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08495;old_locus_tag=TthAA11_16790 NZ_AP024926.1 Protein Homology CDS 1587173 1587784 . - 0 ID=cds-WP_143586387.1;Parent=gene-LDO09_RS08495;Dbxref=Genbank:WP_143586387.1;Name=WP_143586387.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629152.1;locus_tag=LDO09_RS08495;product=NAAT family transporter;protein_id=WP_143586387.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1587786 1588280 . - . ID=gene-LDO09_RS08500;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=LDO09_RS08500;old_locus_tag=TthAA11_16800 NZ_AP024926.1 Protein Homology CDS 1587786 1588280 . - 0 ID=cds-WP_143586389.1;Parent=gene-LDO09_RS08500;Dbxref=Genbank:WP_143586389.1;Name=WP_143586389.1;Ontology_term=GO:0006525;gbkey=CDS;gene=argR;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633181.1;locus_tag=LDO09_RS08500;product=arginine repressor;protein_id=WP_143586389.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1588290 1589480 . - . ID=gene-LDO09_RS08505;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LDO09_RS08505;old_locus_tag=TthAA11_16810 NZ_AP024926.1 Protein Homology CDS 1588290 1589480 . - 0 ID=cds-WP_143586391.1;Parent=gene-LDO09_RS08505;Dbxref=Genbank:WP_143586391.1;Name=WP_143586391.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510717.1;locus_tag=LDO09_RS08505;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_143586391.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1589487 1589786 . - . ID=gene-LDO09_RS08510;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LDO09_RS08510;old_locus_tag=TthAA11_16820 NZ_AP024926.1 Protein Homology CDS 1589487 1589786 . - 0 ID=cds-WP_008633185.1;Parent=gene-LDO09_RS08510;Dbxref=Genbank:WP_008633185.1;Name=WP_008633185.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633185.1;locus_tag=LDO09_RS08510;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_008633185.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1589767 1590429 . - . ID=gene-LDO09_RS08515;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LDO09_RS08515;old_locus_tag=TthAA11_16830 NZ_AP024926.1 Protein Homology CDS 1589767 1590429 . - 0 ID=cds-WP_143586986.1;Parent=gene-LDO09_RS08515;Dbxref=Genbank:WP_143586986.1;Name=WP_143586986.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633187.1;locus_tag=LDO09_RS08515;product=guanylate kinase;protein_id=WP_143586986.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1590482 1591909 . + . ID=gene-LDO09_RS08520;Name=LDO09_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08520;old_locus_tag=TthAA11_16840 NZ_AP024926.1 Protein Homology CDS 1590482 1591909 . + 0 ID=cds-WP_143586393.1;Parent=gene-LDO09_RS08520;Dbxref=Genbank:WP_143586393.1;Name=WP_143586393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550869.1;locus_tag=LDO09_RS08520;product=glycoside hydrolase family 13 protein;protein_id=WP_143586393.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1591906 1592349 . - . ID=gene-LDO09_RS08525;Name=LDO09_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08525;old_locus_tag=TthAA11_16850 NZ_AP024926.1 Protein Homology CDS 1591906 1592349 . - 0 ID=cds-WP_143586395.1;Parent=gene-LDO09_RS08525;Dbxref=Genbank:WP_143586395.1;Name=WP_143586395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228767.1;locus_tag=LDO09_RS08525;product=DNA base-flipping protein;protein_id=WP_143586395.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1592354 1593403 . - . ID=gene-LDO09_RS08530;Name=LDO09_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08530;old_locus_tag=TthAA11_16860 NZ_AP024926.1 Protein Homology CDS 1592354 1593403 . - 0 ID=cds-WP_172619202.1;Parent=gene-LDO09_RS08530;Dbxref=Genbank:WP_172619202.1;Name=WP_172619202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173608.1;locus_tag=LDO09_RS08530;product=SpoIID/LytB domain-containing protein;protein_id=WP_172619202.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1593439 1594893 . - . ID=gene-LDO09_RS08535;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=LDO09_RS08535;old_locus_tag=TthAA11_16870 NZ_AP024926.1 Protein Homology CDS 1593439 1594893 . - 0 ID=cds-WP_223968671.1;Parent=gene-LDO09_RS08535;Dbxref=Genbank:WP_223968671.1;Name=WP_223968671.1;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173609.1;locus_tag=LDO09_RS08535;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=WP_223968671.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1594904 1595527 . - . ID=gene-LDO09_RS08540;Name=LDO09_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08540;old_locus_tag=TthAA11_16880 NZ_AP024926.1 Protein Homology CDS 1594904 1595527 . - 0 ID=cds-WP_014629144.1;Parent=gene-LDO09_RS08540;Dbxref=Genbank:WP_014629144.1;Name=WP_014629144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629144.1;locus_tag=LDO09_RS08540;product=Crp/Fnr family transcriptional regulator;protein_id=WP_014629144.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1595537 1596355 . - . ID=gene-LDO09_RS08545;Name=LDO09_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08545;old_locus_tag=TthAA11_16890 NZ_AP024926.1 Protein Homology CDS 1595537 1596355 . - 0 ID=cds-WP_011228771.1;Parent=gene-LDO09_RS08545;Dbxref=Genbank:WP_011228771.1;Name=WP_011228771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629143.1;locus_tag=LDO09_RS08545;product=1%2C4-dihydroxy-6-naphthoate synthase;protein_id=WP_011228771.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1596362 1599112 . - . ID=gene-LDO09_RS08550;Name=LDO09_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08550;old_locus_tag=TthAA11_16900 NZ_AP024926.1 Protein Homology CDS 1596362 1599112 . - 0 ID=cds-WP_223965700.1;Parent=gene-LDO09_RS08550;Dbxref=Genbank:WP_223965700.1;Name=WP_223965700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510722.1;locus_tag=LDO09_RS08550;product=hypothetical protein;protein_id=WP_223965700.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1599167 1600189 . - . ID=gene-LDO09_RS08555;Name=LDO09_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08555;old_locus_tag=TthAA11_16910 NZ_AP024926.1 Protein Homology CDS 1599167 1600189 . - 0 ID=cds-WP_172967289.1;Parent=gene-LDO09_RS08555;Dbxref=Genbank:WP_172967289.1;Name=WP_172967289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718068.1;locus_tag=LDO09_RS08555;product=deoxyhypusine synthase;protein_id=WP_172967289.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1600252 1600473 . - . ID=gene-LDO09_RS08560;Name=LDO09_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08560;old_locus_tag=TthAA11_16920 NZ_AP024926.1 Protein Homology CDS 1600252 1600473 . - 0 ID=cds-WP_143586403.1;Parent=gene-LDO09_RS08560;Dbxref=Genbank:WP_143586403.1;Name=WP_143586403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510724.1;locus_tag=LDO09_RS08560;product=hypothetical protein;protein_id=WP_143586403.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1600473 1600871 . - . ID=gene-LDO09_RS08565;Name=LDO09_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08565;old_locus_tag=TthAA11_16930 NZ_AP024926.1 Protein Homology CDS 1600473 1600871 . - 0 ID=cds-WP_143586405.1;Parent=gene-LDO09_RS08565;Dbxref=Genbank:WP_143586405.1;Name=WP_143586405.1;Ontology_term=GO:0004521,GO:0005515;gbkey=CDS;go_function=endoribonuclease activity|0004521||IEA,protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510725.1;locus_tag=LDO09_RS08565;product=putative toxin-antitoxin system toxin component%2C PIN family;protein_id=WP_143586405.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1600868 1601074 . - . ID=gene-LDO09_RS08570;Name=LDO09_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08570;old_locus_tag=TthAA11_16940 NZ_AP024926.1 Protein Homology CDS 1600868 1601074 . - 0 ID=cds-WP_054638599.1;Parent=gene-LDO09_RS08570;Dbxref=Genbank:WP_054638599.1;Name=WP_054638599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510726.1;locus_tag=LDO09_RS08570;product=hypothetical protein;protein_id=WP_054638599.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1601158 1602048 . - . ID=gene-LDO09_RS08575;Name=LDO09_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08575;old_locus_tag=TthAA11_16950 NZ_AP024926.1 Protein Homology CDS 1601158 1602048 . - 0 ID=cds-WP_223968673.1;Parent=gene-LDO09_RS08575;Dbxref=Genbank:WP_223968673.1;Name=WP_223968673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014514912.1;locus_tag=LDO09_RS08575;product=2-hydroxyacid dehydrogenase;protein_id=WP_223968673.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1602023 1602550 . - . ID=gene-LDO09_RS08580;Name=LDO09_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08580;old_locus_tag=TthAA11_16960 NZ_AP024926.1 Protein Homology CDS 1602023 1602550 . - 0 ID=cds-WP_011173618.1;Parent=gene-LDO09_RS08580;Dbxref=Genbank:WP_011173618.1;Name=WP_011173618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173618.1;locus_tag=LDO09_RS08580;product=GNAT family N-acetyltransferase;protein_id=WP_011173618.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1602560 1603834 . - . ID=gene-LDO09_RS08585;Name=LDO09_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08585;old_locus_tag=TthAA11_16970 NZ_AP024926.1 Protein Homology CDS 1602560 1603834 . - 0 ID=cds-WP_143586411.1;Parent=gene-LDO09_RS08585;Dbxref=Genbank:WP_143586411.1;Name=WP_143586411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043978.1;locus_tag=LDO09_RS08585;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_143586411.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1603844 1605103 . - . ID=gene-LDO09_RS08590;Name=LDO09_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08590;old_locus_tag=TthAA11_16980 NZ_AP024926.1 Protein Homology CDS 1603844 1605103 . - 0 ID=cds-WP_143586413.1;Parent=gene-LDO09_RS08590;Dbxref=Genbank:WP_143586413.1;Name=WP_143586413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173619.1;locus_tag=LDO09_RS08590;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_143586413.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1605129 1606679 . - . ID=gene-LDO09_RS08595;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=LDO09_RS08595;old_locus_tag=TthAA11_16990 NZ_AP024926.1 Protein Homology CDS 1605129 1606679 . - 0 ID=cds-WP_008633201.1;Parent=gene-LDO09_RS08595;Dbxref=Genbank:WP_008633201.1;Name=WP_008633201.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA;go_process=proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228781.1;locus_tag=LDO09_RS08595;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_008633201.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1606695 1607618 . - . ID=gene-LDO09_RS08600;Name=LDO09_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08600;old_locus_tag=TthAA11_17000 NZ_AP024926.1 Protein Homology CDS 1606695 1607618 . - 0 ID=cds-WP_143586415.1;Parent=gene-LDO09_RS08600;Dbxref=Genbank:WP_143586415.1;Name=WP_143586415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228782.1;locus_tag=LDO09_RS08600;product=proline dehydrogenase family protein;protein_id=WP_143586415.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1607615 1608277 . - . ID=gene-LDO09_RS08605;Name=LDO09_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08605;old_locus_tag=TthAA11_17010 NZ_AP024926.1 Protein Homology CDS 1607615 1608277 . - 0 ID=cds-WP_143586417.1;Parent=gene-LDO09_RS08605;Dbxref=Genbank:WP_143586417.1;Name=WP_143586417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173621.1;locus_tag=LDO09_RS08605;product=GntR family transcriptional regulator;protein_id=WP_143586417.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1608325 1609215 . - . ID=gene-LDO09_RS08610;Name=LDO09_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08610;old_locus_tag=TthAA11_17020 NZ_AP024926.1 Protein Homology CDS 1608325 1609215 . - 0 ID=cds-WP_143586419.1;Parent=gene-LDO09_RS08610;Dbxref=Genbank:WP_143586419.1;Name=WP_143586419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629134.1;locus_tag=LDO09_RS08610;product=DUF4032 domain-containing protein;protein_id=WP_143586419.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1609311 1610498 . + . ID=gene-LDO09_RS08615;Name=LDO09_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08615;old_locus_tag=TthAA11_17030 NZ_AP024926.1 Protein Homology CDS 1609311 1610498 . + 0 ID=cds-WP_143586421.1;Parent=gene-LDO09_RS08615;Dbxref=Genbank:WP_143586421.1;Name=WP_143586421.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629133.1;locus_tag=LDO09_RS08615;product=glycine C-acetyltransferase;protein_id=WP_143586421.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1610499 1611692 . + . ID=gene-LDO09_RS08620;Name=LDO09_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08620;old_locus_tag=TthAA11_17040 NZ_AP024926.1 Protein Homology CDS 1610499 1611692 . + 0 ID=cds-WP_143586423.1;Parent=gene-LDO09_RS08620;Dbxref=Genbank:WP_143586423.1;Name=WP_143586423.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718134.1;locus_tag=LDO09_RS08620;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_143586423.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1611679 1612062 . - . ID=gene-LDO09_RS08625;Name=LDO09_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08625;old_locus_tag=TthAA11_17050 NZ_AP024926.1 Protein Homology CDS 1611679 1612062 . - 0 ID=cds-WP_014629131.1;Parent=gene-LDO09_RS08625;Dbxref=Genbank:WP_014629131.1;Name=WP_014629131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173627.1;locus_tag=LDO09_RS08625;product=hypothetical protein;protein_id=WP_014629131.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1612202 1614106 . + . ID=gene-LDO09_RS08630;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LDO09_RS08630;old_locus_tag=TthAA11_17060 NZ_AP024926.1 Protein Homology CDS 1612202 1614106 . + 0 ID=cds-WP_143586425.1;Parent=gene-LDO09_RS08630;Dbxref=Genbank:WP_143586425.1;Name=WP_143586425.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629130.1;locus_tag=LDO09_RS08630;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_143586425.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1614154 1615113 . - . ID=gene-LDO09_RS08635;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=LDO09_RS08635;old_locus_tag=TthAA11_17070 NZ_AP024926.1 Protein Homology CDS 1614154 1615113 . - 0 ID=cds-WP_223968675.1;Parent=gene-LDO09_RS08635;Dbxref=Genbank:WP_223968675.1;Name=WP_223968675.1;gbkey=CDS;gene=ddl;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228789.1;locus_tag=LDO09_RS08635;product=D-alanine--D-alanine ligase;protein_id=WP_223968675.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1615123 1615674 . - . ID=gene-LDO09_RS08640;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LDO09_RS08640;old_locus_tag=TthAA11_17080 NZ_AP024926.1 Protein Homology CDS 1615123 1615674 . - 0 ID=cds-WP_011173630.1;Parent=gene-LDO09_RS08640;Dbxref=Genbank:WP_011173630.1;Name=WP_011173630.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633218.1;locus_tag=LDO09_RS08640;product=aminoacyl-tRNA hydrolase;protein_id=WP_011173630.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1615690 1616310 . - . ID=gene-LDO09_RS08645;Name=LDO09_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08645;old_locus_tag=TthAA11_17090 NZ_AP024926.1 Protein Homology CDS 1615690 1616310 . - 0 ID=cds-WP_223968677.1;Parent=gene-LDO09_RS08645;Dbxref=Genbank:WP_223968677.1;Name=WP_223968677.1;Ontology_term=GO:0006412,GO:0006950,GO:0003735,GO:0008097,GO:0000315,GO:0022625;gbkey=CDS;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550276.1;locus_tag=LDO09_RS08645;product=50S ribosomal protein L25;protein_id=WP_223968677.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1616430 1616855 . - . ID=gene-LDO09_RS08650;Name=LDO09_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08650;old_locus_tag=TthAA11_17100 NZ_AP024926.1 Protein Homology CDS 1616430 1616855 . - 0 ID=cds-WP_014629127.1;Parent=gene-LDO09_RS08650;Dbxref=Genbank:WP_014629127.1;Name=WP_014629127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629127.1;locus_tag=LDO09_RS08650;product=hypothetical protein;protein_id=WP_014629127.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1616863 1617450 . - . ID=gene-LDO09_RS08655;Name=LDO09_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08655;old_locus_tag=TthAA11_17110 NZ_AP024926.1 Protein Homology CDS 1616863 1617450 . - 0 ID=cds-WP_014629126.1;Parent=gene-LDO09_RS08655;Dbxref=Genbank:WP_014629126.1;Name=WP_014629126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629126.1;locus_tag=LDO09_RS08655;product=hypothetical protein;protein_id=WP_014629126.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1617476 1618780 . - . ID=gene-LDO09_RS08660;Name=LDO09_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08660;old_locus_tag=TthAA11_17120 NZ_AP024926.1 Protein Homology CDS 1617476 1618780 . - 0 ID=cds-WP_223968679.1;Parent=gene-LDO09_RS08660;Dbxref=Genbank:WP_223968679.1;Name=WP_223968679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173634.1;locus_tag=LDO09_RS08660;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_223968679.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1618749 1619399 . - . ID=gene-LDO09_RS08665;Name=LDO09_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08665;old_locus_tag=TthAA11_17130 NZ_AP024926.1 Protein Homology CDS 1618749 1619399 . - 0 ID=cds-WP_011228792.1;Parent=gene-LDO09_RS08665;Dbxref=Genbank:WP_011228792.1;Name=WP_011228792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510742.1;locus_tag=LDO09_RS08665;product=response regulator transcription factor;protein_id=WP_011228792.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1619396 1621354 . - . ID=gene-LDO09_RS08670;Name=LDO09_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08670;old_locus_tag=TthAA11_17140 NZ_AP024926.1 Protein Homology CDS 1619396 1621354 . - 0 ID=cds-WP_143586435.1;Parent=gene-LDO09_RS08670;Dbxref=Genbank:WP_143586435.1;Name=WP_143586435.1;Ontology_term=GO:0006468,GO:0004672;gbkey=CDS;go_function=protein kinase activity|0004672||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173636.1;locus_tag=LDO09_RS08670;product=protein kinase;protein_id=WP_143586435.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1621354 1622109 . - . ID=gene-LDO09_RS08675;Name=LDO09_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08675;old_locus_tag=TthAA11_17150 NZ_AP024926.1 Protein Homology CDS 1621354 1622109 . - 0 ID=cds-WP_172619204.1;Parent=gene-LDO09_RS08675;Dbxref=Genbank:WP_172619204.1;Name=WP_172619204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629122.1;locus_tag=LDO09_RS08675;product=protein phosphatase 2C domain-containing protein;protein_id=WP_172619204.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1622135 1623850 . + . ID=gene-LDO09_RS08680;Name=LDO09_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08680;old_locus_tag=TthAA11_17160 NZ_AP024926.1 Protein Homology CDS 1622135 1623850 . + 0 ID=cds-WP_143586439.1;Parent=gene-LDO09_RS08680;Dbxref=Genbank:WP_143586439.1;Name=WP_143586439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510745.1;locus_tag=LDO09_RS08680;product=hypothetical protein;protein_id=WP_143586439.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1623893 1625086 . + . ID=gene-LDO09_RS08685;Name=LDO09_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08685;old_locus_tag=TthAA11_17170 NZ_AP024926.1 Protein Homology CDS 1623893 1625086 . + 0 ID=cds-WP_143586441.1;Parent=gene-LDO09_RS08685;Dbxref=Genbank:WP_143586441.1;Name=WP_143586441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629120.1;locus_tag=LDO09_RS08685;product=MFS transporter;protein_id=WP_143586441.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1625083 1626063 . - . ID=gene-LDO09_RS08690;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LDO09_RS08690;old_locus_tag=TthAA11_17180 NZ_AP024926.1 Protein Homology CDS 1625083 1626063 . - 0 ID=cds-WP_172619205.1;Parent=gene-LDO09_RS08690;Dbxref=Genbank:WP_172619205.1;Name=WP_172619205.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110440.1;locus_tag=LDO09_RS08690;product=porphobilinogen synthase;protein_id=WP_172619205.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1626094 1626411 . + . ID=gene-LDO09_RS08695;Name=LDO09_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08695;old_locus_tag=TthAA11_17190 NZ_AP024926.1 Protein Homology CDS 1626094 1626411 . + 0 ID=cds-WP_008633232.1;Parent=gene-LDO09_RS08695;Dbxref=Genbank:WP_008633232.1;Name=WP_008633232.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633232.1;locus_tag=LDO09_RS08695;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_008633232.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1626412 1626996 . + . ID=gene-LDO09_RS08700;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LDO09_RS08700;old_locus_tag=TthAA11_17200 NZ_AP024926.1 Protein Homology CDS 1626412 1626996 . + 0 ID=cds-WP_014629118.1;Parent=gene-LDO09_RS08700;Dbxref=Genbank:WP_014629118.1;Name=WP_014629118.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633233.1;locus_tag=LDO09_RS08700;product=recombination mediator RecR;protein_id=WP_014629118.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1626998 1627381 . + . ID=gene-LDO09_RS08705;Name=LDO09_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08705;old_locus_tag=TthAA11_17210 NZ_AP024926.1 Protein Homology CDS 1626998 1627381 . + 0 ID=cds-WP_143586446.1;Parent=gene-LDO09_RS08705;Dbxref=Genbank:WP_143586446.1;Name=WP_143586446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228799.1;locus_tag=LDO09_RS08705;product=hypothetical protein;protein_id=WP_143586446.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1627369 1627710 . + . ID=gene-LDO09_RS08710;Name=LDO09_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08710;old_locus_tag=TthAA11_17220 NZ_AP024926.1 Protein Homology CDS 1627369 1627710 . + 0 ID=cds-WP_011173642.1;Parent=gene-LDO09_RS08710;Dbxref=Genbank:WP_011173642.1;Name=WP_011173642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173642.1;locus_tag=LDO09_RS08710;product=roadblock/LC7 domain-containing protein;protein_id=WP_011173642.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1627695 1628033 . + . ID=gene-LDO09_RS08715;Name=LDO09_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08715;old_locus_tag=TthAA11_17230 NZ_AP024926.1 Protein Homology CDS 1627695 1628033 . + 0 ID=cds-WP_060384182.1;Parent=gene-LDO09_RS08715;Dbxref=Genbank:WP_060384182.1;Name=WP_060384182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629117.1;locus_tag=LDO09_RS08715;product=roadblock/LC7 domain-containing protein;protein_id=WP_060384182.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1628030 1628296 . + . ID=gene-LDO09_RS08720;Name=LDO09_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08720;old_locus_tag=TthAA11_17240 NZ_AP024926.1 Protein Homology CDS 1628030 1628296 . + 0 ID=cds-WP_008633236.1;Parent=gene-LDO09_RS08720;Dbxref=Genbank:WP_008633236.1;Name=WP_008633236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173644.1;locus_tag=LDO09_RS08720;product=DUF3467 domain-containing protein;protein_id=WP_008633236.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1628357 1630162 . - . ID=gene-LDO09_RS08725;Name=LDO09_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08725;old_locus_tag=TthAA11_17250 NZ_AP024926.1 Protein Homology CDS 1628357 1630162 . - 0 ID=cds-WP_172619206.1;Parent=gene-LDO09_RS08725;Dbxref=Genbank:WP_172619206.1;Name=WP_172619206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633237.1;locus_tag=LDO09_RS08725;product=S9 family peptidase;protein_id=WP_172619206.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1630230 1630958 . + . ID=gene-LDO09_RS08730;Name=LDO09_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08730;old_locus_tag=TthAA11_17260 NZ_AP024926.1 Protein Homology CDS 1630230 1630958 . + 0 ID=cds-WP_143586450.1;Parent=gene-LDO09_RS08730;Dbxref=Genbank:WP_143586450.1;Name=WP_143586450.1;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629115.1;locus_tag=LDO09_RS08730;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_143586450.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1630959 1631555 . + . ID=gene-LDO09_RS08735;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LDO09_RS08735;old_locus_tag=TthAA11_17270 NZ_AP024926.1 Protein Homology CDS 1630959 1631555 . + 0 ID=cds-WP_143586452.1;Parent=gene-LDO09_RS08735;Dbxref=Genbank:WP_143586452.1;Name=WP_143586452.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629114.1;locus_tag=LDO09_RS08735;product=dTMP kinase;protein_id=WP_143586452.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1631563 1632018 . + . ID=gene-LDO09_RS08740;Name=LDO09_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08740;old_locus_tag=TthAA11_17280 NZ_AP024926.1 Protein Homology CDS 1631563 1632018 . + 0 ID=cds-WP_143586454.1;Parent=gene-LDO09_RS08740;Dbxref=Genbank:WP_143586454.1;Name=WP_143586454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633243.1;locus_tag=LDO09_RS08740;product=DUF192 domain-containing protein;protein_id=WP_143586454.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1632029 1632478 . + . ID=gene-LDO09_RS08745;Name=LDO09_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08745;old_locus_tag=TthAA11_17290 NZ_AP024926.1 Protein Homology CDS 1632029 1632478 . + 0 ID=cds-WP_014629112.1;Parent=gene-LDO09_RS08745;Dbxref=Genbank:WP_014629112.1;Name=WP_014629112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510751.1;locus_tag=LDO09_RS08745;product=DUF192 domain-containing protein;protein_id=WP_014629112.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1632534 1632767 . - . ID=gene-LDO09_RS08750;Name=LDO09_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08750;old_locus_tag=TthAA11_17300 NZ_AP024926.1 Protein Homology CDS 1632534 1632767 . - 0 ID=cds-WP_011228803.1;Parent=gene-LDO09_RS08750;Dbxref=Genbank:WP_011228803.1;Name=WP_011228803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633246.1;locus_tag=LDO09_RS08750;product=FmdB family transcriptional regulator;protein_id=WP_011228803.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1632843 1633397 . + . ID=gene-LDO09_RS08755;Name=LDO09_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08755;old_locus_tag=TthAA11_17310 NZ_AP024926.1 Protein Homology CDS 1632843 1633397 . + 0 ID=cds-WP_124104086.1;Parent=gene-LDO09_RS08755;Dbxref=Genbank:WP_124104086.1;Name=WP_124104086.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633248.1;locus_tag=LDO09_RS08755;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_124104086.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1633403 1634014 . + . ID=gene-LDO09_RS08760;Name=LDO09_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08760;old_locus_tag=TthAA11_17320 NZ_AP024926.1 Protein Homology CDS 1633403 1634014 . + 0 ID=cds-WP_143586456.1;Parent=gene-LDO09_RS08760;Dbxref=Genbank:WP_143586456.1;Name=WP_143586456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228805.1;locus_tag=LDO09_RS08760;product=HAD family phosphatase;protein_id=WP_143586456.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1634011 1634538 . - . ID=gene-LDO09_RS08765;Name=LDO09_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08765;old_locus_tag=TthAA11_17330 NZ_AP024926.1 Protein Homology CDS 1634011 1634538 . - 0 ID=cds-WP_008633251.1;Parent=gene-LDO09_RS08765;Dbxref=Genbank:WP_008633251.1;Name=WP_008633251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718014.1;locus_tag=LDO09_RS08765;product=adenine phosphoribosyltransferase;protein_id=WP_008633251.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1634548 1635084 . - . ID=gene-LDO09_RS08770;Name=LDO09_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08770;old_locus_tag=TthAA11_17340 NZ_AP024926.1 Protein Homology CDS 1634548 1635084 . - 0 ID=cds-WP_008633254.1;Parent=gene-LDO09_RS08770;Dbxref=Genbank:WP_008633254.1;Name=WP_008633254.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633254.1;locus_tag=LDO09_RS08770;product=phosphoribosyltransferase family protein;protein_id=WP_008633254.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1635107 1635535 . + . ID=gene-LDO09_RS08775;Name=LDO09_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08775;old_locus_tag=TthAA11_17350 NZ_AP024926.1 Protein Homology CDS 1635107 1635535 . + 0 ID=cds-WP_223968681.1;Parent=gene-LDO09_RS08775;Dbxref=Genbank:WP_223968681.1;Name=WP_223968681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328633.1;locus_tag=LDO09_RS08775;product=bifunctional nuclease family protein;protein_id=WP_223968681.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1635567 1636364 . + . ID=gene-LDO09_RS08780;Name=LDO09_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08780;old_locus_tag=TthAA11_17360 NZ_AP024926.1 Protein Homology CDS 1635567 1636364 . + 0 ID=cds-WP_223968683.1;Parent=gene-LDO09_RS08780;Dbxref=Genbank:WP_223968683.1;Name=WP_223968683.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173653.1;locus_tag=LDO09_RS08780;product=metallophosphoesterase;protein_id=WP_223968683.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1636345 1636668 . - . ID=gene-LDO09_RS08785;Name=LDO09_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08785;old_locus_tag=TthAA11_17370 NZ_AP024926.1 Protein Homology CDS 1636345 1636668 . - 0 ID=cds-WP_223968685.1;Parent=gene-LDO09_RS08785;Dbxref=Genbank:WP_223968685.1;Name=WP_223968685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173654.1;locus_tag=LDO09_RS08785;product=histidine triad nucleotide-binding protein;protein_id=WP_223968685.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1636679 1637989 . - . ID=gene-LDO09_RS08790;Name=LDO09_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08790;old_locus_tag=TthAA11_17380 NZ_AP024926.1 Protein Homology CDS 1636679 1637989 . - 0 ID=cds-WP_223968687.1;Parent=gene-LDO09_RS08790;Dbxref=Genbank:WP_223968687.1;Name=WP_223968687.1;Ontology_term=GO:0008172,GO:0016782,GO:0051539;gbkey=CDS;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629107.1;locus_tag=LDO09_RS08790;product=MiaB/RimO family radical SAM methylthiotransferase;protein_id=WP_223968687.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1638052 1638987 . + . ID=gene-LDO09_RS08795;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LDO09_RS08795;old_locus_tag=TthAA11_17390 NZ_AP024926.1 Protein Homology CDS 1638052 1638987 . + 0 ID=cds-WP_143586464.1;Parent=gene-LDO09_RS08795;Dbxref=Genbank:WP_143586464.1;Name=WP_143586464.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629106.1;locus_tag=LDO09_RS08795;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_143586464.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1639007 1640071 . + . ID=gene-LDO09_RS08800;Name=LDO09_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08800;old_locus_tag=TthAA11_17400 NZ_AP024926.1 Protein Homology CDS 1639007 1640071 . + 0 ID=cds-WP_223968689.1;Parent=gene-LDO09_RS08800;Dbxref=Genbank:WP_223968689.1;Name=WP_223968689.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173657.1;locus_tag=LDO09_RS08800;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_223968689.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1640114 1640578 . - . ID=gene-LDO09_RS08805;Name=LDO09_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08805;old_locus_tag=TthAA11_17410 NZ_AP024926.1 Protein Homology CDS 1640114 1640578 . - 0 ID=cds-WP_008633265.1;Parent=gene-LDO09_RS08805;Dbxref=Genbank:WP_008633265.1;Name=WP_008633265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173658.1;locus_tag=LDO09_RS08805;product=Hsp20/alpha crystallin family protein;protein_id=WP_008633265.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1640677 1641369 . + . ID=gene-LDO09_RS08810;Name=LDO09_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08810;old_locus_tag=TthAA11_17420 NZ_AP024926.1 Protein Homology CDS 1640677 1641369 . + 0 ID=cds-WP_143586468.1;Parent=gene-LDO09_RS08810;Dbxref=Genbank:WP_143586468.1;Name=WP_143586468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510755.1;locus_tag=LDO09_RS08810;product=rhodanese-like domain-containing protein;protein_id=WP_143586468.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1641366 1641989 . + . ID=gene-LDO09_RS08815;Name=LDO09_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08815;old_locus_tag=TthAA11_17430 NZ_AP024926.1 Protein Homology CDS 1641366 1641989 . + 0 ID=cds-WP_223965710.1;Parent=gene-LDO09_RS08815;Dbxref=Genbank:WP_223965710.1;Name=WP_223965710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629103.1;locus_tag=LDO09_RS08815;product=MBL fold metallo-hydrolase;protein_id=WP_223965710.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1641977 1642705 . + . ID=gene-LDO09_RS08820;Name=LDO09_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08820;old_locus_tag=TthAA11_17440 NZ_AP024926.1 Protein Homology CDS 1641977 1642705 . + 0 ID=cds-WP_143586472.1;Parent=gene-LDO09_RS08820;Dbxref=Genbank:WP_143586472.1;Name=WP_143586472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228813.1;locus_tag=LDO09_RS08820;product=C4-type zinc ribbon domain-containing protein;protein_id=WP_143586472.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1642709 1643137 . - . ID=gene-LDO09_RS08825;Name=LDO09_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08825;old_locus_tag=TthAA11_17450 NZ_AP024926.1 Protein Homology CDS 1642709 1643137 . - 0 ID=cds-WP_143586475.1;Parent=gene-LDO09_RS08825;Dbxref=Genbank:WP_143586475.1;Name=WP_143586475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228814.1;locus_tag=LDO09_RS08825;product=OsmC family protein;protein_id=WP_143586475.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1643213 1643803 . - . ID=gene-LDO09_RS08830;Name=LDO09_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08830;old_locus_tag=TthAA11_17460 NZ_AP024926.1 Protein Homology CDS 1643213 1643803 . - 0 ID=cds-WP_143586477.1;Parent=gene-LDO09_RS08830;Dbxref=Genbank:WP_143586477.1;Name=WP_143586477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551380.1;locus_tag=LDO09_RS08830;product=DUF981 domain-containing protein;protein_id=WP_143586477.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1643874 1644650 . + . ID=gene-LDO09_RS08835;Name=LDO09_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08835;old_locus_tag=TthAA11_17470 NZ_AP024926.1 Protein Homology CDS 1643874 1644650 . + 0 ID=cds-WP_143586479.1;Parent=gene-LDO09_RS08835;Dbxref=Genbank:WP_143586479.1;Name=WP_143586479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173664.1;locus_tag=LDO09_RS08835;product=metalloenzyme;protein_id=WP_143586479.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1644718 1645710 . + . ID=gene-LDO09_RS08840;Name=LDO09_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08840;old_locus_tag=TthAA11_17480 NZ_AP024926.1 Protein Homology CDS 1644718 1645710 . + 0 ID=cds-WP_143586482.1;Parent=gene-LDO09_RS08840;Dbxref=Genbank:WP_143586482.1;Name=WP_143586482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510761.1;locus_tag=LDO09_RS08840;product=iron ABC transporter substrate-binding protein;protein_id=WP_143586482.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1645757 1647307 . + . ID=gene-LDO09_RS08845;Name=LDO09_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08845;old_locus_tag=TthAA11_17490 NZ_AP024926.1 Protein Homology CDS 1645757 1647307 . + 0 ID=cds-WP_143586484.1;Parent=gene-LDO09_RS08845;Dbxref=Genbank:WP_143586484.1;Name=WP_143586484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228818.1;locus_tag=LDO09_RS08845;product=iron ABC transporter permease;protein_id=WP_143586484.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1647286 1648338 . + . ID=gene-LDO09_RS08850;Name=LDO09_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08850;old_locus_tag=TthAA11_17500 NZ_AP024926.1 Protein Homology CDS 1647286 1648338 . + 0 ID=cds-WP_124105426.1;Parent=gene-LDO09_RS08850;Dbxref=Genbank:WP_124105426.1;Name=WP_124105426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228819.1;locus_tag=LDO09_RS08850;product=ABC transporter ATP-binding protein;protein_id=WP_124105426.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1648343 1649104 . + . ID=gene-LDO09_RS08855;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LDO09_RS08855;old_locus_tag=TthAA11_17510 NZ_AP024926.1 Protein Homology CDS 1648343 1649104 . + 0 ID=cds-WP_143586486.1;Parent=gene-LDO09_RS08855;Dbxref=Genbank:WP_143586486.1;Name=WP_143586486.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173668.1;locus_tag=LDO09_RS08855;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_143586486.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1649154 1650341 . - . ID=gene-LDO09_RS08860;Name=LDO09_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08860;old_locus_tag=TthAA11_17520 NZ_AP024926.1 Protein Homology CDS 1649154 1650341 . - 0 ID=cds-WP_011228820.1;Parent=gene-LDO09_RS08860;Dbxref=Genbank:WP_011228820.1;Name=WP_011228820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629095.1;locus_tag=LDO09_RS08860;product=ABC transporter permease;protein_id=WP_011228820.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1650351 1651361 . - . ID=gene-LDO09_RS08865;Name=LDO09_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08865;old_locus_tag=TthAA11_17530 NZ_AP024926.1 Protein Homology CDS 1650351 1651361 . - 0 ID=cds-WP_143586488.1;Parent=gene-LDO09_RS08865;Dbxref=Genbank:WP_143586488.1;Name=WP_143586488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173671.1;locus_tag=LDO09_RS08865;product=ABC transporter permease;protein_id=WP_143586488.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1651436 1653304 . - . ID=gene-LDO09_RS08870;Name=LDO09_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08870;old_locus_tag=TthAA11_17540 NZ_AP024926.1 Protein Homology CDS 1651436 1653304 . - 0 ID=cds-WP_143586490.1;Parent=gene-LDO09_RS08870;Dbxref=Genbank:WP_143586490.1;Name=WP_143586490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629093.1;locus_tag=LDO09_RS08870;product=peptide ABC transporter substrate-binding protein;protein_id=WP_143586490.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1653396 1654232 . + . ID=gene-LDO09_RS08875;Name=LDO09_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08875;old_locus_tag=TthAA11_17550 NZ_AP024926.1 Protein Homology CDS 1653396 1654232 . + 0 ID=cds-WP_143584783.1-3;Parent=gene-LDO09_RS08875;Dbxref=Genbank:WP_143584783.1;Name=WP_143584783.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511377.1;locus_tag=LDO09_RS08875;product=IS982 family transposase;protein_id=WP_143584783.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1654328 1654486 . + . ID=gene-LDO09_RS08880;Name=LDO09_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08880;old_locus_tag=TthAA11_17560 NZ_AP024926.1 Protein Homology CDS 1654328 1654486 . + 0 ID=cds-WP_223968691.1;Parent=gene-LDO09_RS08880;Dbxref=Genbank:WP_223968691.1;Name=WP_223968691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511070.1;locus_tag=LDO09_RS08880;product=hypothetical protein;protein_id=WP_223968691.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1654547 1654639 . + . ID=gene-LDO09_RS08885;Name=LDO09_RS08885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS08885;partial=true;pseudo=true;start_range=.,1654547 NZ_AP024926.1 Protein Homology CDS 1654547 1654639 . + 0 ID=cds-LDO09_RS08885;Parent=gene-LDO09_RS08885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1;locus_tag=LDO09_RS08885;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1654547;transl_table=11 NZ_AP024926.1 RefSeq gene 1654773 1655153 . - . ID=gene-LDO09_RS08890;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LDO09_RS08890;old_locus_tag=TthAA11_17570 NZ_AP024926.1 Protein Homology CDS 1654773 1655153 . - 0 ID=cds-WP_014629092.1;Parent=gene-LDO09_RS08890;Dbxref=Genbank:WP_014629092.1;Name=WP_014629092.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633304.1;locus_tag=LDO09_RS08890;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_014629092.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1655225 1656355 . + . ID=gene-LDO09_RS08895;Name=LDO09_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08895;old_locus_tag=TthAA11_17580 NZ_AP024926.1 Protein Homology CDS 1655225 1656355 . + 0 ID=cds-WP_143586492.1;Parent=gene-LDO09_RS08895;Dbxref=Genbank:WP_143586492.1;Name=WP_143586492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633305.1;locus_tag=LDO09_RS08895;product=M24 family metallopeptidase;protein_id=WP_143586492.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1656382 1657314 . + . ID=gene-LDO09_RS08900;Name=LDO09_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08900;old_locus_tag=TthAA11_17590 NZ_AP024926.1 Protein Homology CDS 1656382 1657314 . + 0 ID=cds-WP_011173675.1;Parent=gene-LDO09_RS08900;Dbxref=Genbank:WP_011173675.1;Name=WP_011173675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003047444.1;locus_tag=LDO09_RS08900;product=ribose-phosphate pyrophosphokinase;protein_id=WP_011173675.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1657311 1658027 . + . ID=gene-LDO09_RS08905;Name=LDO09_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08905;old_locus_tag=TthAA11_17600 NZ_AP024926.1 Protein Homology CDS 1657311 1658027 . + 0 ID=cds-WP_014629089.1;Parent=gene-LDO09_RS08905;Dbxref=Genbank:WP_014629089.1;Name=WP_014629089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629089.1;locus_tag=LDO09_RS08905;product=phospholipase;protein_id=WP_014629089.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1658014 1658598 . + . ID=gene-LDO09_RS08910;Name=LDO09_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08910;old_locus_tag=TthAA11_17610 NZ_AP024926.1 Protein Homology CDS 1658014 1658598 . + 0 ID=cds-WP_223968693.1;Parent=gene-LDO09_RS08910;Dbxref=Genbank:WP_223968693.1;Name=WP_223968693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633308.1;locus_tag=LDO09_RS08910;product=DUF72 domain-containing protein;protein_id=WP_223968693.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1658595 1660487 . + . ID=gene-LDO09_RS08915;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=LDO09_RS08915;old_locus_tag=TthAA11_17620 NZ_AP024926.1 Protein Homology CDS 1658595 1660487 . + 0 ID=cds-WP_223968695.1;Parent=gene-LDO09_RS08915;Dbxref=Genbank:WP_223968695.1;Name=WP_223968695.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111551.1;locus_tag=LDO09_RS08915;product=biosynthetic arginine decarboxylase;protein_id=WP_223968695.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1660513 1661439 . + . ID=gene-LDO09_RS08920;Name=LDO09_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08920;old_locus_tag=TthAA11_17630 NZ_AP024926.1 Protein Homology CDS 1660513 1661439 . + 0 ID=cds-WP_223968697.1;Parent=gene-LDO09_RS08920;Dbxref=Genbank:WP_223968697.1;Name=WP_223968697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629087.1;locus_tag=LDO09_RS08920;product=GGDEF domain-containing protein;protein_id=WP_223968697.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1661540 1662727 . - . ID=gene-LDO09_RS08925;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LDO09_RS08925;old_locus_tag=TthAA11_17640 NZ_AP024926.1 Protein Homology CDS 1661540 1662727 . - 0 ID=cds-WP_014629086.1;Parent=gene-LDO09_RS08925;Dbxref=Genbank:WP_014629086.1;Name=WP_014629086.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629086.1;locus_tag=LDO09_RS08925;product=methionine adenosyltransferase;protein_id=WP_014629086.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1662813 1663586 . + . ID=gene-LDO09_RS08930;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=LDO09_RS08930;old_locus_tag=TthAA11_17650 NZ_AP024926.1 Protein Homology CDS 1662813 1663586 . + 0 ID=cds-WP_143586499.1;Parent=gene-LDO09_RS08930;Dbxref=Genbank:WP_143586499.1;Name=WP_143586499.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629085.1;locus_tag=LDO09_RS08930;product=glutamate racemase;protein_id=WP_143586499.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1663661 1664314 . + . ID=gene-LDO09_RS08935;Name=LDO09_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08935;old_locus_tag=TthAA11_17660 NZ_AP024926.1 Protein Homology CDS 1663661 1664314 . + 0 ID=cds-WP_223968699.1;Parent=gene-LDO09_RS08935;Dbxref=Genbank:WP_223968699.1;Name=WP_223968699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633319.1;locus_tag=LDO09_RS08935;product=TIGR00730 family Rossman fold protein;protein_id=WP_223968699.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1664289 1666523 . - . ID=gene-LDO09_RS08940;Name=mutS2;gbkey=Gene;gene=mutS2;gene_biotype=protein_coding;locus_tag=LDO09_RS08940;old_locus_tag=TthAA11_17670 NZ_AP024926.1 Protein Homology CDS 1664289 1666523 . - 0 ID=cds-WP_143586503.1;Parent=gene-LDO09_RS08940;Dbxref=Genbank:WP_143586503.1;Name=WP_143586503.1;gbkey=CDS;gene=mutS2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228829.1;locus_tag=LDO09_RS08940;product=endonuclease MutS2;protein_id=WP_143586503.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1666615 1668327 . - . ID=gene-LDO09_RS08945;Name=LDO09_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08945;old_locus_tag=TthAA11_17680 NZ_AP024926.1 Protein Homology CDS 1666615 1668327 . - 0 ID=cds-WP_172619208.1;Parent=gene-LDO09_RS08945;Dbxref=Genbank:WP_172619208.1;Name=WP_172619208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173683.1;locus_tag=LDO09_RS08945;product=glycoside hydrolase family 13 protein;protein_id=WP_172619208.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1668324 1668659 . - . ID=gene-LDO09_RS08950;Name=LDO09_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08950;old_locus_tag=TthAA11_17690 NZ_AP024926.1 Protein Homology CDS 1668324 1668659 . - 0 ID=cds-WP_096411677.1;Parent=gene-LDO09_RS08950;Dbxref=Genbank:WP_096411677.1;Name=WP_096411677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629081.1;locus_tag=LDO09_RS08950;product=DUF86 domain-containing protein;protein_id=WP_096411677.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1668656 1668943 . - . ID=gene-LDO09_RS08955;Name=LDO09_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08955;old_locus_tag=TthAA11_17700 NZ_AP024926.1 Protein Homology CDS 1668656 1668943 . - 0 ID=cds-WP_014629080.1;Parent=gene-LDO09_RS08955;Dbxref=Genbank:WP_014629080.1;Name=WP_014629080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629080.1;locus_tag=LDO09_RS08955;product=nucleotidyltransferase;protein_id=WP_014629080.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1668948 1670267 . - . ID=gene-LDO09_RS08960;Name=LDO09_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08960;old_locus_tag=TthAA11_17710 NZ_AP024926.1 Protein Homology CDS 1668948 1670267 . - 0 ID=cds-WP_223968701.1;Parent=gene-LDO09_RS08960;Dbxref=Genbank:WP_223968701.1;Name=WP_223968701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173686.1;locus_tag=LDO09_RS08960;product=sugar ABC transporter permease;protein_id=WP_223968701.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1670268 1671596 . - . ID=gene-LDO09_RS08965;Name=LDO09_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08965;old_locus_tag=TthAA11_17720 NZ_AP024926.1 Protein Homology CDS 1670268 1671596 . - 0 ID=cds-WP_223968703.1;Parent=gene-LDO09_RS08965;Dbxref=Genbank:WP_223968703.1;Name=WP_223968703.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228834.1;locus_tag=LDO09_RS08965;product=ABC transporter permease subunit;protein_id=WP_223968703.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1671655 1672851 . - . ID=gene-LDO09_RS08970;Name=LDO09_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08970;old_locus_tag=TthAA11_17730 NZ_AP024926.1 Protein Homology CDS 1671655 1672851 . - 0 ID=cds-WP_223968705.1;Parent=gene-LDO09_RS08970;Dbxref=Genbank:WP_223968705.1;Name=WP_223968705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629077.1;locus_tag=LDO09_RS08970;product=maltose ABC transporter substrate-binding protein;protein_id=WP_223968705.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1672949 1673980 . - . ID=gene-LDO09_RS08975;Name=LDO09_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08975;old_locus_tag=TthAA11_17740 NZ_AP024926.1 Protein Homology CDS 1672949 1673980 . - 0 ID=cds-WP_143586511.1;Parent=gene-LDO09_RS08975;Dbxref=Genbank:WP_143586511.1;Name=WP_143586511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328589.1;locus_tag=LDO09_RS08975;product=hypothetical protein;protein_id=WP_143586511.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1673977 1674588 . - . ID=gene-LDO09_RS08980;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=LDO09_RS08980;old_locus_tag=TthAA11_17750 NZ_AP024926.1 Protein Homology CDS 1673977 1674588 . - 0 ID=cds-WP_172619209.1;Parent=gene-LDO09_RS08980;Dbxref=Genbank:WP_172619209.1;Name=WP_172619209.1;Ontology_term=GO:0006281,GO:0016462;gbkey=CDS;gene=rdgB;go_function=pyrophosphatase activity|0016462||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629075.1;locus_tag=LDO09_RS08980;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_172619209.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1674604 1675542 . - . ID=gene-LDO09_RS08985;Name=LDO09_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08985;old_locus_tag=TthAA11_17760 NZ_AP024926.1 Protein Homology CDS 1674604 1675542 . - 0 ID=cds-WP_223968707.1;Parent=gene-LDO09_RS08985;Dbxref=Genbank:WP_223968707.1;Name=WP_223968707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228837.1;locus_tag=LDO09_RS08985;product=polyprenyl synthetase family protein;protein_id=WP_223968707.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1675559 1675897 . - . ID=gene-LDO09_RS08990;Name=LDO09_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08990;old_locus_tag=TthAA11_17770 NZ_AP024926.1 GeneMarkS-2+ CDS 1675559 1675897 . - 0 ID=cds-WP_008633341.1;Parent=gene-LDO09_RS08990;Dbxref=Genbank:WP_008633341.1;Name=WP_008633341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS08990;product=hypothetical protein;protein_id=WP_008633341.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1676015 1676650 . - . ID=gene-LDO09_RS08995;Name=LDO09_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS08995;old_locus_tag=TthAA11_17780 NZ_AP024926.1 Protein Homology CDS 1676015 1676650 . - 0 ID=cds-WP_011173693.1;Parent=gene-LDO09_RS08995;Dbxref=Genbank:WP_011173693.1;Name=WP_011173693.1;Ontology_term=GO:0045892,GO:0051775;gbkey=CDS;go_process=negative regulation of DNA-templated transcription|0045892||IEA,response to redox state|0051775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173693.1;locus_tag=LDO09_RS08995;product=redox-sensing transcriptional repressor Rex;protein_id=WP_011173693.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1676647 1677417 . - . ID=gene-LDO09_RS09000;Name=LDO09_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09000;old_locus_tag=TthAA11_17790 NZ_AP024926.1 Protein Homology CDS 1676647 1677417 . - 0 ID=cds-WP_223968708.1;Parent=gene-LDO09_RS09000;Dbxref=Genbank:WP_223968708.1;Name=WP_223968708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510786.1;locus_tag=LDO09_RS09000;product=SPOR domain-containing protein;protein_id=WP_223968708.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1677419 1678780 . - . ID=gene-LDO09_RS09005;Name=LDO09_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09005;old_locus_tag=TthAA11_17800 NZ_AP024926.1 Protein Homology CDS 1677419 1678780 . - 0 ID=cds-WP_143586522.1;Parent=gene-LDO09_RS09005;Dbxref=Genbank:WP_143586522.1;Name=WP_143586522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629070.1;locus_tag=LDO09_RS09005;product=tetratricopeptide repeat protein;protein_id=WP_143586522.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1678834 1679346 . + . ID=gene-LDO09_RS09010;Name=LDO09_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09010;old_locus_tag=TthAA11_17810 NZ_AP024926.1 Protein Homology CDS 1678834 1679346 . + 0 ID=cds-WP_008633352.1;Parent=gene-LDO09_RS09010;Dbxref=Genbank:WP_008633352.1;Name=WP_008633352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633352.1;locus_tag=LDO09_RS09010;product=HNH endonuclease;protein_id=WP_008633352.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1679343 1680176 . - . ID=gene-LDO09_RS09015;Name=LDO09_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09015;old_locus_tag=TthAA11_17820 NZ_AP024926.1 Protein Homology CDS 1679343 1680176 . - 0 ID=cds-WP_223968710.1;Parent=gene-LDO09_RS09015;Dbxref=Genbank:WP_223968710.1;Name=WP_223968710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629069.1;locus_tag=LDO09_RS09015;product=DMT family transporter;protein_id=WP_223968710.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1680218 1680697 . + . ID=gene-LDO09_RS09020;Name=LDO09_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09020;old_locus_tag=TthAA11_17830 NZ_AP024926.1 Protein Homology CDS 1680218 1680697 . + 0 ID=cds-WP_008633354.1;Parent=gene-LDO09_RS09020;Dbxref=Genbank:WP_008633354.1;Name=WP_008633354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629068.1;locus_tag=LDO09_RS09020;product=hypothetical protein;protein_id=WP_008633354.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1680807 1681163 . - . ID=gene-LDO09_RS09025;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LDO09_RS09025;old_locus_tag=TthAA11_17840 NZ_AP024926.1 Protein Homology CDS 1680807 1681163 . - 0 ID=cds-WP_008633358.1;Parent=gene-LDO09_RS09025;Dbxref=Genbank:WP_008633358.1;Name=WP_008633358.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043956.1;locus_tag=LDO09_RS09025;product=50S ribosomal protein L17;protein_id=WP_008633358.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1681168 1682115 . - . ID=gene-LDO09_RS09030;Name=LDO09_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09030;old_locus_tag=TthAA11_17850 NZ_AP024926.1 Protein Homology CDS 1681168 1682115 . - 0 ID=cds-WP_014629067.1;Parent=gene-LDO09_RS09030;Dbxref=Genbank:WP_014629067.1;Name=WP_014629067.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173698.1;locus_tag=LDO09_RS09030;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_014629067.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1682134 1682763 . - . ID=gene-LDO09_RS09035;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LDO09_RS09035;old_locus_tag=TthAA11_17860 NZ_AP024926.1 Protein Homology CDS 1682134 1682763 . - 0 ID=cds-WP_011173699.1;Parent=gene-LDO09_RS09035;Dbxref=Genbank:WP_011173699.1;Name=WP_011173699.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012010904.1;locus_tag=LDO09_RS09035;product=30S ribosomal protein S4;protein_id=WP_011173699.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1682776 1683165 . - . ID=gene-LDO09_RS09040;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LDO09_RS09040;old_locus_tag=TthAA11_17870 NZ_AP024926.1 Protein Homology CDS 1682776 1683165 . - 0 ID=cds-WP_008633365.1;Parent=gene-LDO09_RS09040;Dbxref=Genbank:WP_008633365.1;Name=WP_008633365.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633365.1;locus_tag=LDO09_RS09040;product=30S ribosomal protein S11;protein_id=WP_008633365.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1683202 1683582 . - . ID=gene-LDO09_RS09045;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LDO09_RS09045;old_locus_tag=TthAA11_17880 NZ_AP024926.1 Protein Homology CDS 1683202 1683582 . - 0 ID=cds-WP_008633368.1;Parent=gene-LDO09_RS09045;Dbxref=Genbank:WP_008633368.1;Name=WP_008633368.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633368.1;locus_tag=LDO09_RS09045;product=30S ribosomal protein S13;protein_id=WP_008633368.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1683594 1683707 . - . ID=gene-LDO09_RS09050;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=LDO09_RS09050 NZ_AP024926.1 Protein Homology CDS 1683594 1683707 . - 0 ID=cds-WP_013704484.1;Parent=gene-LDO09_RS09050;Dbxref=Genbank:WP_013704484.1;Name=WP_013704484.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005487032.1;locus_tag=LDO09_RS09050;product=50S ribosomal protein L36;protein_id=WP_013704484.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1683717 1683935 . - . ID=gene-LDO09_RS09055;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LDO09_RS09055;old_locus_tag=TthAA11_17890 NZ_AP024926.1 Protein Homology CDS 1683717 1683935 . - 0 ID=cds-WP_008633373.1;Parent=gene-LDO09_RS09055;Dbxref=Genbank:WP_008633373.1;Name=WP_008633373.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012611021.1;locus_tag=LDO09_RS09055;product=translation initiation factor IF-1;protein_id=WP_008633373.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1683944 1684711 . - . ID=gene-LDO09_RS09060;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LDO09_RS09060;old_locus_tag=TthAA11_17900 NZ_AP024926.1 Protein Homology CDS 1683944 1684711 . - 0 ID=cds-WP_014510788.1;Parent=gene-LDO09_RS09060;Dbxref=Genbank:WP_014510788.1;Name=WP_014510788.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173700.1;locus_tag=LDO09_RS09060;product=type I methionyl aminopeptidase;protein_id=WP_014510788.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1684711 1685271 . - . ID=gene-LDO09_RS09065;Name=LDO09_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09065;old_locus_tag=TthAA11_17910 NZ_AP024926.1 Protein Homology CDS 1684711 1685271 . - 0 ID=cds-WP_082709623.1;Parent=gene-LDO09_RS09065;Dbxref=Genbank:WP_082709623.1;Name=WP_082709623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173701.1;locus_tag=LDO09_RS09065;product=adenylate kinase;protein_id=WP_082709623.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1685275 1686591 . - . ID=gene-LDO09_RS09070;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LDO09_RS09070;old_locus_tag=TthAA11_17920 NZ_AP024926.1 Protein Homology CDS 1685275 1686591 . - 0 ID=cds-WP_143586524.1;Parent=gene-LDO09_RS09070;Dbxref=Genbank:WP_143586524.1;Name=WP_143586524.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111310.1;locus_tag=LDO09_RS09070;product=preprotein translocase subunit SecY;protein_id=WP_143586524.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1686593 1687045 . - . ID=gene-LDO09_RS09075;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LDO09_RS09075;old_locus_tag=TthAA11_17930 NZ_AP024926.1 Protein Homology CDS 1686593 1687045 . - 0 ID=cds-WP_011173703.1;Parent=gene-LDO09_RS09075;Dbxref=Genbank:WP_011173703.1;Name=WP_011173703.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111309.1;locus_tag=LDO09_RS09075;product=50S ribosomal protein L15;protein_id=WP_011173703.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1687042 1687224 . - . ID=gene-LDO09_RS09080;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LDO09_RS09080;old_locus_tag=TthAA11_17940 NZ_AP024926.1 Protein Homology CDS 1687042 1687224 . - 0 ID=cds-WP_008633387.1;Parent=gene-LDO09_RS09080;Dbxref=Genbank:WP_008633387.1;Name=WP_008633387.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633387.1;locus_tag=LDO09_RS09080;product=50S ribosomal protein L30;protein_id=WP_008633387.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1687205 1687693 . - . ID=gene-LDO09_RS09085;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LDO09_RS09085;old_locus_tag=TthAA11_17950 NZ_AP024926.1 Protein Homology CDS 1687205 1687693 . - 0 ID=cds-WP_008633389.1;Parent=gene-LDO09_RS09085;Dbxref=Genbank:WP_008633389.1;Name=WP_008633389.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633389.1;locus_tag=LDO09_RS09085;product=30S ribosomal protein S5;protein_id=WP_008633389.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1687706 1688044 . - . ID=gene-LDO09_RS09090;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LDO09_RS09090;old_locus_tag=TthAA11_17960 NZ_AP024926.1 Protein Homology CDS 1687706 1688044 . - 0 ID=cds-WP_008633391.1;Parent=gene-LDO09_RS09090;Dbxref=Genbank:WP_008633391.1;Name=WP_008633391.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633391.1;locus_tag=LDO09_RS09090;product=50S ribosomal protein L18;protein_id=WP_008633391.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1688056 1688598 . - . ID=gene-LDO09_RS09095;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LDO09_RS09095;old_locus_tag=TthAA11_17970 NZ_AP024926.1 Protein Homology CDS 1688056 1688598 . - 0 ID=cds-WP_011173704.1;Parent=gene-LDO09_RS09095;Dbxref=Genbank:WP_011173704.1;Name=WP_011173704.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043925.1;locus_tag=LDO09_RS09095;product=50S ribosomal protein L6;protein_id=WP_011173704.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1688598 1689014 . - . ID=gene-LDO09_RS09100;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LDO09_RS09100;old_locus_tag=TthAA11_17980 NZ_AP024926.1 Protein Homology CDS 1688598 1689014 . - 0 ID=cds-WP_014629065.1;Parent=gene-LDO09_RS09100;Dbxref=Genbank:WP_014629065.1;Name=WP_014629065.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173705.1;locus_tag=LDO09_RS09100;product=30S ribosomal protein S8;protein_id=WP_014629065.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1689084 1689269 . - . ID=gene-LDO09_RS09105;Name=LDO09_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09105;old_locus_tag=TthAA11_17990 NZ_AP024926.1 Protein Homology CDS 1689084 1689269 . - 0 ID=cds-WP_008633399.1;Parent=gene-LDO09_RS09105;Dbxref=Genbank:WP_008633399.1;Name=WP_008633399.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003948630.1;locus_tag=LDO09_RS09105;product=type Z 30S ribosomal protein S14;protein_id=WP_008633399.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1689277 1689825 . - . ID=gene-LDO09_RS09110;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LDO09_RS09110;old_locus_tag=TthAA11_18000 NZ_AP024926.1 Protein Homology CDS 1689277 1689825 . - 0 ID=cds-WP_011228843.1;Parent=gene-LDO09_RS09110;Dbxref=Genbank:WP_011228843.1;Name=WP_011228843.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043918.1;locus_tag=LDO09_RS09110;product=50S ribosomal protein L5;protein_id=WP_011228843.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1689829 1690161 . - . ID=gene-LDO09_RS09115;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LDO09_RS09115;old_locus_tag=TthAA11_18010 NZ_AP024926.1 Protein Homology CDS 1689829 1690161 . - 0 ID=cds-WP_008633402.1;Parent=gene-LDO09_RS09115;Dbxref=Genbank:WP_008633402.1;Name=WP_008633402.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043916.1;locus_tag=LDO09_RS09115;product=50S ribosomal protein L24;protein_id=WP_008633402.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1690161 1690529 . - . ID=gene-LDO09_RS09120;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LDO09_RS09120;old_locus_tag=TthAA11_18020 NZ_AP024926.1 Protein Homology CDS 1690161 1690529 . - 0 ID=cds-WP_003043914.1;Parent=gene-LDO09_RS09120;Dbxref=Genbank:WP_003043914.1;Name=WP_003043914.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1;locus_tag=LDO09_RS09120;product=50S ribosomal protein L14;protein_id=WP_003043914.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1690526 1690843 . - . ID=gene-LDO09_RS09125;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LDO09_RS09125;old_locus_tag=TthAA11_18030 NZ_AP024926.1 Protein Homology CDS 1690526 1690843 . - 0 ID=cds-WP_011173708.1;Parent=gene-LDO09_RS09125;Dbxref=Genbank:WP_011173708.1;Name=WP_011173708.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013014858.1;locus_tag=LDO09_RS09125;product=30S ribosomal protein S17;protein_id=WP_011173708.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1690836 1691054 . - . ID=gene-LDO09_RS09130;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LDO09_RS09130;old_locus_tag=TthAA11_18040 NZ_AP024926.1 Protein Homology CDS 1690836 1691054 . - 0 ID=cds-WP_008633416.1;Parent=gene-LDO09_RS09130;Dbxref=Genbank:WP_008633416.1;Name=WP_008633416.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633416.1;locus_tag=LDO09_RS09130;product=50S ribosomal protein L29;protein_id=WP_008633416.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1691041 1691466 . - . ID=gene-LDO09_RS09135;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LDO09_RS09135;old_locus_tag=TthAA11_18050 NZ_AP024926.1 Protein Homology CDS 1691041 1691466 . - 0 ID=cds-WP_096411636.1;Parent=gene-LDO09_RS09135;Dbxref=Genbank:WP_096411636.1;Name=WP_096411636.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228846.1;locus_tag=LDO09_RS09135;product=50S ribosomal protein L16;protein_id=WP_096411636.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1691470 1692189 . - . ID=gene-LDO09_RS09140;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LDO09_RS09140;old_locus_tag=TthAA11_18060 NZ_AP024926.1 Protein Homology CDS 1691470 1692189 . - 0 ID=cds-WP_008633418.1;Parent=gene-LDO09_RS09140;Dbxref=Genbank:WP_008633418.1;Name=WP_008633418.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043871.1;locus_tag=LDO09_RS09140;product=30S ribosomal protein S3;protein_id=WP_008633418.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1692179 1692520 . - . ID=gene-LDO09_RS09145;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LDO09_RS09145;old_locus_tag=TthAA11_18070 NZ_AP024926.1 Protein Homology CDS 1692179 1692520 . - 0 ID=cds-WP_008633419.1;Parent=gene-LDO09_RS09145;Dbxref=Genbank:WP_008633419.1;Name=WP_008633419.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633419.1;locus_tag=LDO09_RS09145;product=50S ribosomal protein L22;protein_id=WP_008633419.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1692523 1692804 . - . ID=gene-LDO09_RS09150;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LDO09_RS09150;old_locus_tag=TthAA11_18080 NZ_AP024926.1 Protein Homology CDS 1692523 1692804 . - 0 ID=cds-WP_011173711.1;Parent=gene-LDO09_RS09150;Dbxref=Genbank:WP_011173711.1;Name=WP_011173711.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013704504.1;locus_tag=LDO09_RS09150;product=30S ribosomal protein S19;protein_id=WP_011173711.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1692813 1693643 . - . ID=gene-LDO09_RS09155;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LDO09_RS09155;old_locus_tag=TthAA11_18090 NZ_AP024926.1 Protein Homology CDS 1692813 1693643 . - 0 ID=cds-WP_143586526.1;Parent=gene-LDO09_RS09155;Dbxref=Genbank:WP_143586526.1;Name=WP_143586526.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173712.1;locus_tag=LDO09_RS09155;product=50S ribosomal protein L2;protein_id=WP_143586526.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1693695 1693985 . - . ID=gene-LDO09_RS09160;Name=LDO09_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09160;old_locus_tag=TthAA11_18100 NZ_AP024926.1 Protein Homology CDS 1693695 1693985 . - 0 ID=cds-WP_008633421.1;Parent=gene-LDO09_RS09160;Dbxref=Genbank:WP_008633421.1;Name=WP_008633421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633421.1;locus_tag=LDO09_RS09160;product=50S ribosomal protein L23;protein_id=WP_008633421.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1693982 1694599 . - . ID=gene-LDO09_RS09165;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LDO09_RS09165;old_locus_tag=TthAA11_18110 NZ_AP024926.1 Protein Homology CDS 1693982 1694599 . - 0 ID=cds-WP_014629063.1;Parent=gene-LDO09_RS09165;Dbxref=Genbank:WP_014629063.1;Name=WP_014629063.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718107.1;locus_tag=LDO09_RS09165;product=50S ribosomal protein L4;protein_id=WP_014629063.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1694611 1695231 . - . ID=gene-LDO09_RS09170;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LDO09_RS09170;old_locus_tag=TthAA11_18120 NZ_AP024926.1 Protein Homology CDS 1694611 1695231 . - 0 ID=cds-WP_011173714.1;Parent=gene-LDO09_RS09170;Dbxref=Genbank:WP_011173714.1;Name=WP_011173714.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173714.1;locus_tag=LDO09_RS09170;product=50S ribosomal protein L3;protein_id=WP_011173714.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1695228 1695545 . - . ID=gene-LDO09_RS09175;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LDO09_RS09175;old_locus_tag=TthAA11_18130 NZ_AP024926.1 Protein Homology CDS 1695228 1695545 . - 0 ID=cds-WP_008633424.1;Parent=gene-LDO09_RS09175;Dbxref=Genbank:WP_008633424.1;Name=WP_008633424.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633424.1;locus_tag=LDO09_RS09175;product=30S ribosomal protein S10;protein_id=WP_008633424.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1695554 1696774 . - . ID=gene-LDO09_RS09180;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LDO09_RS09180;old_locus_tag=TthAA11_18140 NZ_AP024926.1 Protein Homology CDS 1695554 1696774 . - 0 ID=cds-WP_143584279.1-2;Parent=gene-LDO09_RS09180;Dbxref=Genbank:WP_143584279.1;Name=WP_143584279.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003640798.1;locus_tag=LDO09_RS09180;product=elongation factor Tu;protein_id=WP_143584279.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1696832 1698907 . - . ID=gene-LDO09_RS09185;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LDO09_RS09185;old_locus_tag=TthAA11_18150 NZ_AP024926.1 Protein Homology CDS 1696832 1698907 . - 0 ID=cds-WP_143586528.1;Parent=gene-LDO09_RS09185;Dbxref=Genbank:WP_143586528.1;Name=WP_143586528.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551714.1;locus_tag=LDO09_RS09185;product=elongation factor G;protein_id=WP_143586528.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1698910 1699380 . - . ID=gene-LDO09_RS09190;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LDO09_RS09190;old_locus_tag=TthAA11_18160 NZ_AP024926.1 Protein Homology CDS 1698910 1699380 . - 0 ID=cds-WP_008633429.1;Parent=gene-LDO09_RS09190;Dbxref=Genbank:WP_008633429.1;Name=WP_008633429.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002006497.1;locus_tag=LDO09_RS09190;product=30S ribosomal protein S7;protein_id=WP_008633429.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1699388 1699786 . - . ID=gene-LDO09_RS09195;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LDO09_RS09195;old_locus_tag=TthAA11_18170 NZ_AP024926.1 Protein Homology CDS 1699388 1699786 . - 0 ID=cds-WP_024118744.1;Parent=gene-LDO09_RS09195;Dbxref=Genbank:WP_024118744.1;Name=WP_024118744.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_024118744.1;locus_tag=LDO09_RS09195;product=30S ribosomal protein S12;protein_id=WP_024118744.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1699986 1701101 . + . ID=gene-LDO09_RS09200;Name=LDO09_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09200;old_locus_tag=TthAA11_18180 NZ_AP024926.1 Protein Homology CDS 1699986 1701101 . + 0 ID=cds-WP_165739798.1;Parent=gene-LDO09_RS09200;Dbxref=Genbank:WP_165739798.1;Name=WP_165739798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550361.1;locus_tag=LDO09_RS09200;product=M20 family metallopeptidase;protein_id=WP_165739798.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1701098 1701574 . + . ID=gene-LDO09_RS09205;Name=LDO09_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09205;old_locus_tag=TthAA11_18190 NZ_AP024926.1 Protein Homology CDS 1701098 1701574 . + 0 ID=cds-WP_143586530.1;Parent=gene-LDO09_RS09205;Dbxref=Genbank:WP_143586530.1;Name=WP_143586530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173719.1;locus_tag=LDO09_RS09205;product=YbaK/EbsC family protein;protein_id=WP_143586530.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1701577 1701855 . + . ID=gene-LDO09_RS09210;Name=LDO09_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09210;old_locus_tag=TthAA11_18200 NZ_AP024926.1 Protein Homology CDS 1701577 1701855 . + 0 ID=cds-WP_124105398.1;Parent=gene-LDO09_RS09210;Dbxref=Genbank:WP_124105398.1;Name=WP_124105398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629059.1;locus_tag=LDO09_RS09210;product=hypothetical protein;protein_id=WP_124105398.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1701933 1703288 . - . ID=gene-LDO09_RS09215;Name=LDO09_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09215;old_locus_tag=TthAA11_18210 NZ_AP024926.1 Protein Homology CDS 1701933 1703288 . - 0 ID=cds-WP_143586532.1;Parent=gene-LDO09_RS09215;Dbxref=Genbank:WP_143586532.1;Name=WP_143586532.1;Ontology_term=GO:0006865,GO:0005416,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:cation symporter activity|0005416||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173723.1;locus_tag=LDO09_RS09215;product=amino acid carrier protein;protein_id=WP_143586532.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1703292 1704020 . - . ID=gene-LDO09_RS09220;Name=LDO09_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09220;old_locus_tag=TthAA11_18220 NZ_AP024926.1 Protein Homology CDS 1703292 1704020 . - 0 ID=cds-WP_242004642.1;Parent=gene-LDO09_RS09220;Dbxref=Genbank:WP_242004642.1;Name=WP_242004642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173724.1;locus_tag=LDO09_RS09220;product=DUF4388 domain-containing protein;protein_id=WP_242004642.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1704131 1704823 . + . ID=gene-LDO09_RS09225;Name=LDO09_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09225;old_locus_tag=TthAA11_18230 NZ_AP024926.1 Protein Homology CDS 1704131 1704823 . + 0 ID=cds-WP_143586537.1;Parent=gene-LDO09_RS09225;Dbxref=Genbank:WP_143586537.1;Name=WP_143586537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173725.1;locus_tag=LDO09_RS09225;product=alpha/beta fold hydrolase;protein_id=WP_143586537.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1704836 1705582 . + . ID=gene-LDO09_RS09230;Name=LDO09_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09230;old_locus_tag=TthAA11_18240 NZ_AP024926.1 Protein Homology CDS 1704836 1705582 . + 0 ID=cds-WP_143586539.1;Parent=gene-LDO09_RS09230;Dbxref=Genbank:WP_143586539.1;Name=WP_143586539.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228854.1;locus_tag=LDO09_RS09230;product=ZIP family metal transporter;protein_id=WP_143586539.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1705601 1706266 . - . ID=gene-LDO09_RS09235;Name=LDO09_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09235;old_locus_tag=TthAA11_18250 NZ_AP024926.1 Protein Homology CDS 1705601 1706266 . - 0 ID=cds-WP_143586541.1;Parent=gene-LDO09_RS09235;Dbxref=Genbank:WP_143586541.1;Name=WP_143586541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228855.1;locus_tag=LDO09_RS09235;product=DNA/RNA nuclease SfsA;protein_id=WP_143586541.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1706315 1706407 . - . ID=gene-LDO09_RS09240;Name=LDO09_RS09240;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS09240;old_locus_tag=TthAA11_t00410 NZ_AP024926.1 tRNAscan-SE tRNA 1706315 1706407 . - . ID=rna-LDO09_RS09240;Parent=gene-LDO09_RS09240;anticodon=(pos:complement(1706371..1706373));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS09240;product=tRNA-Ser NZ_AP024926.1 tRNAscan-SE exon 1706315 1706407 . - . ID=exon-LDO09_RS09240-1;Parent=rna-LDO09_RS09240;anticodon=(pos:complement(1706371..1706373));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS09240;product=tRNA-Ser NZ_AP024926.1 RefSeq gene 1706415 1706505 . - . ID=gene-LDO09_RS09245;Name=LDO09_RS09245;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS09245;old_locus_tag=TthAA11_t00420 NZ_AP024926.1 tRNAscan-SE tRNA 1706415 1706505 . - . ID=rna-LDO09_RS09245;Parent=gene-LDO09_RS09245;anticodon=(pos:complement(1706469..1706471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS09245;product=tRNA-Ser NZ_AP024926.1 tRNAscan-SE exon 1706415 1706505 . - . ID=exon-LDO09_RS09245-1;Parent=rna-LDO09_RS09245;anticodon=(pos:complement(1706469..1706471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS09245;product=tRNA-Ser NZ_AP024926.1 RefSeq gene 1706527 1707186 . - . ID=gene-LDO09_RS09250;Name=LDO09_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09250;old_locus_tag=TthAA11_18260 NZ_AP024926.1 Protein Homology CDS 1706527 1707186 . - 0 ID=cds-WP_223968712.1;Parent=gene-LDO09_RS09250;Dbxref=Genbank:WP_223968712.1;Name=WP_223968712.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LDO09_RS09250;product=acyltransferase family protein;protein_id=WP_223968712.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1707161 1708594 . - . ID=gene-LDO09_RS09255;Name=LDO09_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09255;old_locus_tag=TthAA11_18270 NZ_AP024926.1 Protein Homology CDS 1707161 1708594 . - 0 ID=cds-WP_223968715.1;Parent=gene-LDO09_RS09255;Dbxref=Genbank:WP_223968715.1;Name=WP_223968715.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629052.1;locus_tag=LDO09_RS09255;product=SWIM zinc finger family protein;protein_id=WP_223968715.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1708667 1709719 . + . ID=gene-LDO09_RS09260;Name=amrS;gbkey=Gene;gene=amrS;gene_biotype=protein_coding;locus_tag=LDO09_RS09260;old_locus_tag=TthAA11_18280 NZ_AP024926.1 Protein Homology CDS 1708667 1709719 . + 0 ID=cds-WP_223968717.1;Parent=gene-LDO09_RS09260;Dbxref=Genbank:WP_223968717.1;Name=WP_223968717.1;Ontology_term=GO:0051536;gbkey=CDS;gene=amrS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046509.1;locus_tag=LDO09_RS09260;product=AmmeMemoRadiSam system radical SAM enzyme;protein_id=WP_223968717.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1709707 1710498 . + . ID=gene-LDO09_RS09265;Name=amrB;gbkey=Gene;gene=amrB;gene_biotype=protein_coding;locus_tag=LDO09_RS09265;old_locus_tag=TthAA11_18290 NZ_AP024926.1 Protein Homology CDS 1709707 1710498 . + 0 ID=cds-WP_223968719.1;Parent=gene-LDO09_RS09265;Dbxref=Genbank:WP_223968719.1;Name=WP_223968719.1;gbkey=CDS;gene=amrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629050.1;locus_tag=LDO09_RS09265;product=AmmeMemoRadiSam system protein B;protein_id=WP_223968719.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1710504 1711058 . + . ID=gene-LDO09_RS09270;Name=LDO09_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09270;old_locus_tag=TthAA11_18300 NZ_AP024926.1 Protein Homology CDS 1710504 1711058 . + 0 ID=cds-WP_143586551.1;Parent=gene-LDO09_RS09270;Dbxref=Genbank:WP_143586551.1;Name=WP_143586551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173733.1;locus_tag=LDO09_RS09270;product=Uma2 family endonuclease;protein_id=WP_143586551.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1711055 1711444 . - . ID=gene-LDO09_RS09275;Name=LDO09_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09275;old_locus_tag=TthAA11_18310 NZ_AP024926.1 Protein Homology CDS 1711055 1711444 . - 0 ID=cds-WP_143586553.1;Parent=gene-LDO09_RS09275;Dbxref=Genbank:WP_143586553.1;Name=WP_143586553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173734.1;locus_tag=LDO09_RS09275;product=hypothetical protein;protein_id=WP_143586553.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1711496 1711885 . + . ID=gene-LDO09_RS09280;Name=LDO09_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09280;old_locus_tag=TthAA11_18320 NZ_AP024926.1 Protein Homology CDS 1711496 1711885 . + 0 ID=cds-WP_014629048.1;Parent=gene-LDO09_RS09280;Dbxref=Genbank:WP_014629048.1;Name=WP_014629048.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629048.1;locus_tag=LDO09_RS09280;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_014629048.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1711882 1712631 . - . ID=gene-LDO09_RS09285;Name=LDO09_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09285;old_locus_tag=TthAA11_18330 NZ_AP024926.1 Protein Homology CDS 1711882 1712631 . - 0 ID=cds-WP_011173736.1;Parent=gene-LDO09_RS09285;Dbxref=Genbank:WP_011173736.1;Name=WP_011173736.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629047.1;locus_tag=LDO09_RS09285;product=heme-dependent peroxidase;protein_id=WP_011173736.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1712664 1713731 . + . ID=gene-LDO09_RS09290;Name=LDO09_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09290;old_locus_tag=TthAA11_18340 NZ_AP024926.1 Protein Homology CDS 1712664 1713731 . + 0 ID=cds-WP_143586555.1;Parent=gene-LDO09_RS09290;Dbxref=Genbank:WP_143586555.1;Name=WP_143586555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629046.1;locus_tag=LDO09_RS09290;product=mechanosensitive ion channel family protein;protein_id=WP_143586555.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1713728 1715944 . + . ID=gene-LDO09_RS09295;Name=LDO09_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09295;old_locus_tag=TthAA11_18350 NZ_AP024926.1 Protein Homology CDS 1713728 1715944 . + 0 ID=cds-WP_223968721.1;Parent=gene-LDO09_RS09295;Dbxref=Genbank:WP_223968721.1;Name=WP_223968721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228862.1;locus_tag=LDO09_RS09295;product=hypothetical protein;protein_id=WP_223968721.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1715964 1718147 . + . ID=gene-LDO09_RS09300;Name=LDO09_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09300;old_locus_tag=TthAA11_18360 NZ_AP024926.1 Protein Homology CDS 1715964 1718147 . + 0 ID=cds-WP_143586559.1;Parent=gene-LDO09_RS09300;Dbxref=Genbank:WP_143586559.1;Name=WP_143586559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173739.1;locus_tag=LDO09_RS09300;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_143586559.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1718351 1718551 . + . ID=gene-LDO09_RS09305;Name=LDO09_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09305;old_locus_tag=TthAA11_18370 NZ_AP024926.1 Protein Homology CDS 1718351 1718551 . + 0 ID=cds-WP_011228864.1;Parent=gene-LDO09_RS09305;Dbxref=Genbank:WP_011228864.1;Name=WP_011228864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228864.1;locus_tag=LDO09_RS09305;product=cation transporter;protein_id=WP_011228864.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1718554 1718838 . + . ID=gene-LDO09_RS09310;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=LDO09_RS09310;old_locus_tag=TthAA11_18380 NZ_AP024926.1 Protein Homology CDS 1718554 1718838 . + 0 ID=cds-WP_011173741.1;Parent=gene-LDO09_RS09310;Dbxref=Genbank:WP_011173741.1;Name=WP_011173741.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173741.1;locus_tag=LDO09_RS09310;product=metal-sensitive transcriptional regulator CsoR;protein_id=WP_011173741.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1718843 1721239 . + . ID=gene-LDO09_RS09315;Name=LDO09_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09315;old_locus_tag=TthAA11_18390 NZ_AP024926.1 Protein Homology CDS 1718843 1721239 . + 0 ID=cds-WP_223968723.1;Parent=gene-LDO09_RS09315;Dbxref=Genbank:WP_223968723.1;Name=WP_223968723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228865.1;locus_tag=LDO09_RS09315;product=heavy metal translocating P-type ATPase;protein_id=WP_223968723.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1721257 1721469 . + . ID=gene-LDO09_RS09320;Name=LDO09_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09320;old_locus_tag=TthAA11_18400 NZ_AP024926.1 Protein Homology CDS 1721257 1721469 . + 0 ID=cds-WP_011173743.1;Parent=gene-LDO09_RS09320;Dbxref=Genbank:WP_011173743.1;Name=WP_011173743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629041.1;locus_tag=LDO09_RS09320;product=SHOCT domain-containing protein;protein_id=WP_011173743.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1721466 1722143 . + . ID=gene-LDO09_RS09325;Name=LDO09_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09325;old_locus_tag=TthAA11_18410 NZ_AP024926.1 Protein Homology CDS 1721466 1722143 . + 0 ID=cds-WP_223968725.1;Parent=gene-LDO09_RS09325;Dbxref=Genbank:WP_223968725.1;Name=WP_223968725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173744.1;locus_tag=LDO09_RS09325;product=response regulator transcription factor;protein_id=WP_223968725.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1722127 1723248 . + . ID=gene-LDO09_RS09330;Name=LDO09_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09330;old_locus_tag=TthAA11_18420 NZ_AP024926.1 Protein Homology CDS 1722127 1723248 . + 0 ID=cds-WP_223968726.1;Parent=gene-LDO09_RS09330;Dbxref=Genbank:WP_223968726.1;Name=WP_223968726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228866.1;locus_tag=LDO09_RS09330;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_223968726.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1723259 1724017 . + . ID=gene-LDO09_RS09335;Name=LDO09_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09335;old_locus_tag=TthAA11_18430 NZ_AP024926.1 Protein Homology CDS 1723259 1724017 . + 0 ID=cds-WP_223968728.1;Parent=gene-LDO09_RS09335;Dbxref=Genbank:WP_223968728.1;Name=WP_223968728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551338.1;locus_tag=LDO09_RS09335;product=glycoside hydrolase;protein_id=WP_223968728.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1724390 1724602 . + . ID=gene-LDO09_RS09345;Name=LDO09_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09345 NZ_AP024926.1 Protein Homology CDS 1724390 1724602 . + 0 ID=cds-WP_143586571.1;Parent=gene-LDO09_RS09345;Dbxref=Genbank:WP_143586571.1;Name=WP_143586571.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021560.2;locus_tag=LDO09_RS09345;product=DUF2283 domain-containing protein;protein_id=WP_143586571.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1724620 1725246 . - . ID=gene-LDO09_RS09350;Name=LDO09_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09350;old_locus_tag=TthAA11_18450 NZ_AP024926.1 Protein Homology CDS 1724620 1725246 . - 0 ID=cds-WP_143586573.1;Parent=gene-LDO09_RS09350;Dbxref=Genbank:WP_143586573.1;Name=WP_143586573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173750.1;locus_tag=LDO09_RS09350;product=class I SAM-dependent methyltransferase;protein_id=WP_143586573.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1725346 1725585 . + . ID=gene-LDO09_RS09355;Name=LDO09_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09355;old_locus_tag=TthAA11_18460 NZ_AP024926.1 Protein Homology CDS 1725346 1725585 . + 0 ID=cds-WP_172619233.1;Parent=gene-LDO09_RS09355;Dbxref=Genbank:WP_172619233.1;Name=WP_172619233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173751.1;locus_tag=LDO09_RS09355;product=hypothetical protein;protein_id=WP_172619233.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1725582 1726226 . + . ID=gene-LDO09_RS09360;Name=LDO09_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09360;old_locus_tag=TthAA11_18470 NZ_AP024926.1 Protein Homology CDS 1725582 1726226 . + 0 ID=cds-WP_143586577.1;Parent=gene-LDO09_RS09360;Dbxref=Genbank:WP_143586577.1;Name=WP_143586577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228874.1;locus_tag=LDO09_RS09360;product=peptidase M4;protein_id=WP_143586577.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1726249 1726638 . + . ID=gene-LDO09_RS09365;Name=LDO09_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09365;old_locus_tag=TthAA11_18480 NZ_AP024926.1 Protein Homology CDS 1726249 1726638 . + 0 ID=cds-WP_143586579.1;Parent=gene-LDO09_RS09365;Dbxref=Genbank:WP_143586579.1;Name=WP_143586579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510824.1;locus_tag=LDO09_RS09365;product=DUF302 domain-containing protein;protein_id=WP_143586579.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1726682 1728070 . + . ID=gene-LDO09_RS09370;Name=LDO09_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09370;old_locus_tag=TthAA11_18490 NZ_AP024926.1 Protein Homology CDS 1726682 1728070 . + 0 ID=cds-WP_016328371.1;Parent=gene-LDO09_RS09370;Dbxref=Genbank:WP_016328371.1;Name=WP_016328371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173754.1;locus_tag=LDO09_RS09370;product=multicopper oxidase family protein;protein_id=WP_016328371.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1728154 1730211 . + . ID=gene-LDO09_RS09375;Name=LDO09_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09375;old_locus_tag=TthAA11_18500 NZ_AP024926.1 Protein Homology CDS 1728154 1730211 . + 0 ID=cds-WP_143586581.1;Parent=gene-LDO09_RS09375;Dbxref=Genbank:WP_143586581.1;Name=WP_143586581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328370.1;locus_tag=LDO09_RS09375;product=heavy metal translocating P-type ATPase;protein_id=WP_143586581.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1730221 1731435 . + . ID=gene-LDO09_RS09380;Name=LDO09_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09380;old_locus_tag=TthAA11_18510 NZ_AP024926.1 Protein Homology CDS 1730221 1731435 . + 0 ID=cds-WP_143586583.1;Parent=gene-LDO09_RS09380;Dbxref=Genbank:WP_143586583.1;Name=WP_143586583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551553.1;locus_tag=LDO09_RS09380;product=cysteine desulfurase;protein_id=WP_143586583.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1731443 1731859 . + . ID=gene-LDO09_RS09385;Name=LDO09_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09385;old_locus_tag=TthAA11_18520 NZ_AP024926.1 Protein Homology CDS 1731443 1731859 . + 0 ID=cds-WP_011228878.1;Parent=gene-LDO09_RS09385;Dbxref=Genbank:WP_011228878.1;Name=WP_011228878.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716292.1;locus_tag=LDO09_RS09385;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=WP_011228878.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1731856 1732062 . + . ID=gene-LDO09_RS09390;Name=LDO09_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09390;old_locus_tag=TthAA11_18530 NZ_AP024926.1 Protein Homology CDS 1731856 1732062 . + 0 ID=cds-WP_124105375.1;Parent=gene-LDO09_RS09390;Dbxref=Genbank:WP_124105375.1;Name=WP_124105375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633498.1;locus_tag=LDO09_RS09390;product=hypothetical protein;protein_id=WP_124105375.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1732059 1732769 . + . ID=gene-LDO09_RS09395;Name=LDO09_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09395;old_locus_tag=TthAA11_18540 NZ_AP024926.1 Protein Homology CDS 1732059 1732769 . + 0 ID=cds-WP_143586585.1;Parent=gene-LDO09_RS09395;Dbxref=Genbank:WP_143586585.1;Name=WP_143586585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228880.1;locus_tag=LDO09_RS09395;product=alpha/beta hydrolase;protein_id=WP_143586585.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1732766 1733302 . - . ID=gene-LDO09_RS09400;Name=LDO09_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09400;old_locus_tag=TthAA11_18550 NZ_AP024926.1 Protein Homology CDS 1732766 1733302 . - 0 ID=cds-WP_143586587.1;Parent=gene-LDO09_RS09400;Dbxref=Genbank:WP_143586587.1;Name=WP_143586587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633501.1;locus_tag=LDO09_RS09400;product=Uma2 family endonuclease;protein_id=WP_143586587.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1733319 1734287 . - . ID=gene-LDO09_RS09405;Name=LDO09_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09405;old_locus_tag=TthAA11_18560 NZ_AP024926.1 Protein Homology CDS 1733319 1734287 . - 0 ID=cds-WP_143586589.1;Parent=gene-LDO09_RS09405;Dbxref=Genbank:WP_143586589.1;Name=WP_143586589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510832.1;locus_tag=LDO09_RS09405;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_143586589.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1734284 1735288 . - . ID=gene-LDO09_RS09410;Name=LDO09_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09410;old_locus_tag=TthAA11_18570 NZ_AP024926.1 Protein Homology CDS 1734284 1735288 . - 0 ID=cds-WP_223965733.1;Parent=gene-LDO09_RS09410;Dbxref=Genbank:WP_223965733.1;Name=WP_223965733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173762.1;locus_tag=LDO09_RS09410;product=hypothetical protein;protein_id=WP_223965733.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1735290 1735841 . - . ID=gene-LDO09_RS09415;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=LDO09_RS09415;old_locus_tag=TthAA11_18580 NZ_AP024926.1 Protein Homology CDS 1735290 1735841 . - 0 ID=cds-WP_014510834.1;Parent=gene-LDO09_RS09415;Dbxref=Genbank:WP_014510834.1;Name=WP_014510834.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173763.1;locus_tag=LDO09_RS09415;product=orotate phosphoribosyltransferase;protein_id=WP_014510834.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1735847 1736620 . - . ID=gene-LDO09_RS09420;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LDO09_RS09420;old_locus_tag=TthAA11_18590 NZ_AP024926.1 Protein Homology CDS 1735847 1736620 . - 0 ID=cds-WP_014629023.1;Parent=gene-LDO09_RS09420;Dbxref=Genbank:WP_014629023.1;Name=WP_014629023.1;Ontology_term=GO:0009220,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633507.1;locus_tag=LDO09_RS09420;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_014629023.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1736619 1736759 . + . ID=gene-LDO09_RS09425;Name=LDO09_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09425;old_locus_tag=TthAA11_18600 NZ_AP024926.1 GeneMarkS-2+ CDS 1736619 1736759 . + 0 ID=cds-WP_172619146.1;Parent=gene-LDO09_RS09425;Dbxref=Genbank:WP_172619146.1;Name=WP_172619146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS09425;product=hypothetical protein;protein_id=WP_172619146.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1736881 1738399 . - . ID=gene-LDO09_RS09430;Name=LDO09_RS09430;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO09_RS09430;old_locus_tag=TthAA11_r00060 NZ_AP024926.1 cmsearch rRNA 1736881 1738399 . - . ID=rna-LDO09_RS09430;Parent=gene-LDO09_RS09430;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS09430;product=16S ribosomal RNA NZ_AP024926.1 cmsearch exon 1736881 1738399 . - . ID=exon-LDO09_RS09430-1;Parent=rna-LDO09_RS09430;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS09430;product=16S ribosomal RNA NZ_AP024926.1 RefSeq gene 1738527 1739192 . + . ID=gene-LDO09_RS09435;Name=LDO09_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09435;old_locus_tag=TthAA11_18610 NZ_AP024926.1 Protein Homology CDS 1738527 1739192 . + 0 ID=cds-WP_143586593.1;Parent=gene-LDO09_RS09435;Dbxref=Genbank:WP_143586593.1;Name=WP_143586593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228885.1;locus_tag=LDO09_RS09435;product=PIG-L family deacetylase;protein_id=WP_143586593.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1739183 1739602 . + . ID=gene-LDO09_RS09440;Name=LDO09_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09440;old_locus_tag=TthAA11_18620 NZ_AP024926.1 Protein Homology CDS 1739183 1739602 . + 0 ID=cds-WP_143586595.1;Parent=gene-LDO09_RS09440;Dbxref=Genbank:WP_143586595.1;Name=WP_143586595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629021.1;locus_tag=LDO09_RS09440;product=archease;protein_id=WP_143586595.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1739591 1740571 . - . ID=gene-LDO09_RS09445;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=LDO09_RS09445;old_locus_tag=TthAA11_18630 NZ_AP024926.1 Protein Homology CDS 1739591 1740571 . - 0 ID=cds-WP_014629020.1;Parent=gene-LDO09_RS09445;Dbxref=Genbank:WP_014629020.1;Name=WP_014629020.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510836.1;locus_tag=LDO09_RS09445;product=phosphate acyltransferase PlsX;protein_id=WP_014629020.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1740574 1740906 . - . ID=gene-LDO09_RS09450;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LDO09_RS09450;old_locus_tag=TthAA11_18640 NZ_AP024926.1 Protein Homology CDS 1740574 1740906 . - 0 ID=cds-WP_011173768.1;Parent=gene-LDO09_RS09450;Dbxref=Genbank:WP_011173768.1;Name=WP_011173768.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516348.1;locus_tag=LDO09_RS09450;product=thioredoxin;protein_id=WP_011173768.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1740970 1741347 . - . ID=gene-LDO09_RS09455;Name=LDO09_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09455;old_locus_tag=TthAA11_18650 NZ_AP024926.1 Protein Homology CDS 1740970 1741347 . - 0 ID=cds-WP_011228887.1;Parent=gene-LDO09_RS09455;Dbxref=Genbank:WP_011228887.1;Name=WP_011228887.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629019.1;locus_tag=LDO09_RS09455;product=S1 RNA-binding domain-containing protein;protein_id=WP_011228887.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1741388 1741867 . - . ID=gene-LDO09_RS09460;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LDO09_RS09460;old_locus_tag=TthAA11_18660 NZ_AP024926.1 Protein Homology CDS 1741388 1741867 . - 0 ID=cds-WP_014629018.1;Parent=gene-LDO09_RS09460;Dbxref=Genbank:WP_014629018.1;Name=WP_014629018.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633520.1;locus_tag=LDO09_RS09460;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_014629018.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1741864 1742877 . - . ID=gene-LDO09_RS09465;Name=LDO09_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09465;old_locus_tag=TthAA11_18670 NZ_AP024926.1 Protein Homology CDS 1741864 1742877 . - 0 ID=cds-WP_014629017.1;Parent=gene-LDO09_RS09465;Dbxref=Genbank:WP_014629017.1;Name=WP_014629017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173771.1;locus_tag=LDO09_RS09465;product=mannose-1-phosphate guanylyltransferase;protein_id=WP_014629017.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1742874 1743884 . - . ID=gene-LDO09_RS09470;Name=LDO09_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09470;old_locus_tag=TthAA11_18680 NZ_AP024926.1 Protein Homology CDS 1742874 1743884 . - 0 ID=cds-WP_014629016.1;Parent=gene-LDO09_RS09470;Dbxref=Genbank:WP_014629016.1;Name=WP_014629016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633522.1;locus_tag=LDO09_RS09470;product=glycosyltransferase family 4 protein;protein_id=WP_014629016.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1743881 1744903 . - . ID=gene-LDO09_RS09475;Name=LDO09_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09475;old_locus_tag=TthAA11_18690 NZ_AP024926.1 Protein Homology CDS 1743881 1744903 . - 0 ID=cds-WP_143586598.1;Parent=gene-LDO09_RS09475;Dbxref=Genbank:WP_143586598.1;Name=WP_143586598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629015.1;locus_tag=LDO09_RS09475;product=mannosyltransferase;protein_id=WP_143586598.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1744881 1746026 . - . ID=gene-LDO09_RS09480;Name=LDO09_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09480;old_locus_tag=TthAA11_18700 NZ_AP024926.1 Protein Homology CDS 1744881 1746026 . - 0 ID=cds-WP_143586600.1;Parent=gene-LDO09_RS09480;Dbxref=Genbank:WP_143586600.1;Name=WP_143586600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629014.1;locus_tag=LDO09_RS09480;product=glycosyltransferase family 4 protein;protein_id=WP_143586600.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1746529 1747719 . + . ID=gene-LDO09_RS09485;Name=LDO09_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09485;old_locus_tag=TthAA11_18710 NZ_AP024926.1 Protein Homology CDS 1746529 1747719 . + 0 ID=cds-WP_014629012.1;Parent=gene-LDO09_RS09485;Dbxref=Genbank:WP_014629012.1;Name=WP_014629012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633532.1;locus_tag=LDO09_RS09485;product=aspartate aminotransferase family protein;protein_id=WP_014629012.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1747716 1748801 . + . ID=gene-LDO09_RS09490;Name=LDO09_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09490;old_locus_tag=TthAA11_18720 NZ_AP024926.1 Protein Homology CDS 1747716 1748801 . + 0 ID=cds-WP_014629011.1;Parent=gene-LDO09_RS09490;Dbxref=Genbank:WP_014629011.1;Name=WP_014629011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228894.1;locus_tag=LDO09_RS09490;product=[LysW]-lysine hydrolase;protein_id=WP_014629011.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1748816 1750420 . + . ID=gene-LDO09_RS09495;Name=LDO09_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09495;old_locus_tag=TthAA11_18730 NZ_AP024926.1 Protein Homology CDS 1748816 1750420 . + 0 ID=cds-WP_223968730.1;Parent=gene-LDO09_RS09495;Dbxref=Genbank:WP_223968730.1;Name=WP_223968730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173779.1;locus_tag=LDO09_RS09495;product=GGDEF domain-containing protein;protein_id=WP_223968730.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1750466 1751077 . - . ID=gene-LDO09_RS09500;Name=LDO09_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09500;old_locus_tag=TthAA11_18740 NZ_AP024926.1 Protein Homology CDS 1750466 1751077 . - 0 ID=cds-WP_207776877.1;Parent=gene-LDO09_RS09500;Dbxref=Genbank:WP_207776877.1;Name=WP_207776877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716272.1;locus_tag=LDO09_RS09500;product=DUF1641 domain-containing protein;protein_id=WP_207776877.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1751087 1752220 . - . ID=gene-LDO09_RS09505;Name=LDO09_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09505;old_locus_tag=TthAA11_18750 NZ_AP024926.1 Protein Homology CDS 1751087 1752220 . - 0 ID=cds-WP_223965734.1;Parent=gene-LDO09_RS09505;Dbxref=Genbank:WP_223965734.1;Name=WP_223965734.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173781.1;locus_tag=LDO09_RS09505;product=FAD-dependent oxidoreductase;protein_id=WP_223965734.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1752304 1753302 . - . ID=gene-LDO09_RS09510;Name=LDO09_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09510;old_locus_tag=TthAA11_18760 NZ_AP024926.1 Protein Homology CDS 1752304 1753302 . - 0 ID=cds-WP_223968732.1;Parent=gene-LDO09_RS09510;Dbxref=Genbank:WP_223968732.1;Name=WP_223968732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228897.1;locus_tag=LDO09_RS09510;product=hypothetical protein;protein_id=WP_223968732.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1753286 1753798 . - . ID=gene-LDO09_RS09515;Name=LDO09_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09515;old_locus_tag=TthAA11_18770 NZ_AP024926.1 Protein Homology CDS 1753286 1753798 . - 0 ID=cds-WP_014629006.1;Parent=gene-LDO09_RS09515;Dbxref=Genbank:WP_014629006.1;Name=WP_014629006.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633541.1;locus_tag=LDO09_RS09515;product=cytochrome c;protein_id=WP_014629006.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1753791 1754309 . - . ID=gene-LDO09_RS09520;Name=LDO09_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09520;old_locus_tag=TthAA11_18780 NZ_AP024926.1 Protein Homology CDS 1753791 1754309 . - 0 ID=cds-WP_143586610.1;Parent=gene-LDO09_RS09520;Dbxref=Genbank:WP_143586610.1;Name=WP_143586610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173784.1;locus_tag=LDO09_RS09520;product=DUF3341 domain-containing protein;protein_id=WP_143586610.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1754319 1755665 . - . ID=gene-LDO09_RS09525;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=LDO09_RS09525;old_locus_tag=TthAA11_18790 NZ_AP024926.1 Protein Homology CDS 1754319 1755665 . - 0 ID=cds-WP_143586612.1;Parent=gene-LDO09_RS09525;Dbxref=Genbank:WP_143586612.1;Name=WP_143586612.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629004.1;locus_tag=LDO09_RS09525;product=polysulfide reductase NrfD;protein_id=WP_143586612.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1755658 1758288 . - . ID=gene-LDO09_RS09530;Name=LDO09_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09530;old_locus_tag=TthAA11_18800 NZ_AP024926.1 Protein Homology CDS 1755658 1758288 . - 0 ID=cds-WP_223968734.1;Parent=gene-LDO09_RS09530;Dbxref=Genbank:WP_223968734.1;Name=WP_223968734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629003.1;locus_tag=LDO09_RS09530;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_223968734.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1758298 1758936 . - . ID=gene-LDO09_RS09535;Name=LDO09_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09535;old_locus_tag=TthAA11_18810 NZ_AP024926.1 Protein Homology CDS 1758298 1758936 . - 0 ID=cds-WP_143586616.1;Parent=gene-LDO09_RS09535;Dbxref=Genbank:WP_143586616.1;Name=WP_143586616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110481.1;locus_tag=LDO09_RS09535;product=cytochrome c3 family protein;protein_id=WP_143586616.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1759093 1760502 . - . ID=gene-LDO09_RS09540;Name=LDO09_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09540;old_locus_tag=TthAA11_18820 NZ_AP024926.1 Protein Homology CDS 1759093 1760502 . - 0 ID=cds-WP_143586618.1;Parent=gene-LDO09_RS09540;Dbxref=Genbank:WP_143586618.1;Name=WP_143586618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633550.1;locus_tag=LDO09_RS09540;product=PEGA domain-containing protein;protein_id=WP_143586618.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1760571 1761521 . - . ID=gene-LDO09_RS09545;Name=LDO09_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09545;old_locus_tag=TthAA11_18830 NZ_AP024926.1 Protein Homology CDS 1760571 1761521 . - 0 ID=cds-WP_008633551.1;Parent=gene-LDO09_RS09545;Dbxref=Genbank:WP_008633551.1;Name=WP_008633551.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228903.1;locus_tag=LDO09_RS09545;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_008633551.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1761505 1762362 . - . ID=gene-LDO09_RS09550;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LDO09_RS09550;old_locus_tag=TthAA11_18840 NZ_AP024926.1 Protein Homology CDS 1761505 1762362 . - 0 ID=cds-WP_143586620.1;Parent=gene-LDO09_RS09550;Dbxref=Genbank:WP_143586620.1;Name=WP_143586620.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328545.1;locus_tag=LDO09_RS09550;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_143586620.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1762362 1762733 . - . ID=gene-LDO09_RS09555;Name=LDO09_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09555;old_locus_tag=TthAA11_18850 NZ_AP024926.1 Protein Homology CDS 1762362 1762733 . - 0 ID=cds-WP_011173792.1;Parent=gene-LDO09_RS09555;Dbxref=Genbank:WP_011173792.1;Name=WP_011173792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510848.1;locus_tag=LDO09_RS09555;product=polymer-forming cytoskeletal protein;protein_id=WP_011173792.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1762735 1763634 . - . ID=gene-LDO09_RS09560;Name=LDO09_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09560;old_locus_tag=TthAA11_18860 NZ_AP024926.1 Protein Homology CDS 1762735 1763634 . - 0 ID=cds-WP_143586622.1;Parent=gene-LDO09_RS09560;Dbxref=Genbank:WP_143586622.1;Name=WP_143586622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014629000.1;locus_tag=LDO09_RS09560;product=M23 family metallopeptidase;protein_id=WP_143586622.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1763766 1765037 . - . ID=gene-LDO09_RS09565;Name=LDO09_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09565;old_locus_tag=TthAA11_18870 NZ_AP024926.1 Protein Homology CDS 1763766 1765037 . - 0 ID=cds-WP_143586624.1;Parent=gene-LDO09_RS09565;Dbxref=Genbank:WP_143586624.1;Name=WP_143586624.1;Ontology_term=GO:0006206;gbkey=CDS;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628999.1;locus_tag=LDO09_RS09565;product=thymidine phosphorylase;protein_id=WP_143586624.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1765060 1765578 . + . ID=gene-LDO09_RS09570;Name=LDO09_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09570;old_locus_tag=TthAA11_18880 NZ_AP024926.1 Protein Homology CDS 1765060 1765578 . + 0 ID=cds-WP_014628998.1;Parent=gene-LDO09_RS09570;Dbxref=Genbank:WP_014628998.1;Name=WP_014628998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628998.1;locus_tag=LDO09_RS09570;product=Uma2 family endonuclease;protein_id=WP_014628998.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1765634 1766551 . - . ID=gene-LDO09_RS09575;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=LDO09_RS09575;old_locus_tag=TthAA11_18890 NZ_AP024926.1 Protein Homology CDS 1765634 1766551 . - 0 ID=cds-WP_143586628.1;Parent=gene-LDO09_RS09575;Dbxref=Genbank:WP_143586628.1;Name=WP_143586628.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043438.1;locus_tag=LDO09_RS09575;product=class II fructose-1%2C6-bisphosphate aldolase;protein_id=WP_143586628.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1766669 1767775 . - . ID=gene-LDO09_RS09580;Name=LDO09_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09580;old_locus_tag=TthAA11_18900 NZ_AP024926.1 Protein Homology CDS 1766669 1767775 . - 0 ID=cds-WP_143586630.1;Parent=gene-LDO09_RS09580;Dbxref=Genbank:WP_143586630.1;Name=WP_143586630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633567.1;locus_tag=LDO09_RS09580;product=type IV pilus twitching motility protein PilT;protein_id=WP_143586630.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1767772 1768602 . - . ID=gene-LDO09_RS09585;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=LDO09_RS09585;old_locus_tag=TthAA11_18910 NZ_AP024926.1 Protein Homology CDS 1767772 1768602 . - 0 ID=cds-WP_143586632.1;Parent=gene-LDO09_RS09585;Dbxref=Genbank:WP_143586632.1;Name=WP_143586632.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173797.1;locus_tag=LDO09_RS09585;product=pantoate--beta-alanine ligase;protein_id=WP_143586632.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1768624 1768902 . + . ID=gene-LDO09_RS09590;Name=LDO09_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09590;old_locus_tag=TthAA11_18920 NZ_AP024926.1 Protein Homology CDS 1768624 1768902 . + 0 ID=cds-WP_143586635.1;Parent=gene-LDO09_RS09590;Dbxref=Genbank:WP_143586635.1;Name=WP_143586635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633571.1;locus_tag=LDO09_RS09590;product=hypothetical protein;protein_id=WP_143586635.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1768960 1769301 . - . ID=gene-LDO09_RS09595;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LDO09_RS09595;old_locus_tag=TthAA11_18930 NZ_AP024926.1 Protein Homology CDS 1768960 1769301 . - 0 ID=cds-WP_011173798.1;Parent=gene-LDO09_RS09595;Dbxref=Genbank:WP_011173798.1;Name=WP_011173798.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110692.1;locus_tag=LDO09_RS09595;product=ribosome silencing factor;protein_id=WP_011173798.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1769308 1770405 . - . ID=gene-LDO09_RS09600;Name=LDO09_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09600;old_locus_tag=TthAA11_18940 NZ_AP024926.1 Protein Homology CDS 1769308 1770405 . - 0 ID=cds-WP_143586637.1;Parent=gene-LDO09_RS09600;Dbxref=Genbank:WP_143586637.1;Name=WP_143586637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628994.1;locus_tag=LDO09_RS09600;product=LCP family protein;protein_id=WP_143586637.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1770405 1770950 . - . ID=gene-LDO09_RS09605;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=LDO09_RS09605;old_locus_tag=TthAA11_18950 NZ_AP024926.1 Protein Homology CDS 1770405 1770950 . - 0 ID=cds-WP_011173800.1;Parent=gene-LDO09_RS09605;Dbxref=Genbank:WP_011173800.1;Name=WP_011173800.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633575.1;locus_tag=LDO09_RS09605;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_011173800.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1770925 1771485 . - . ID=gene-LDO09_RS09610;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=LDO09_RS09610;old_locus_tag=TthAA11_18960 NZ_AP024926.1 Protein Homology CDS 1770925 1771485 . - 0 ID=cds-WP_143586639.1;Parent=gene-LDO09_RS09610;Dbxref=Genbank:WP_143586639.1;Name=WP_143586639.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228912.1;locus_tag=LDO09_RS09610;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_143586639.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1771486 1772736 . - . ID=gene-LDO09_RS09615;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=LDO09_RS09615;old_locus_tag=TthAA11_18970 NZ_AP024926.1 Protein Homology CDS 1771486 1772736 . - 0 ID=cds-WP_223965739.1;Parent=gene-LDO09_RS09615;Dbxref=Genbank:WP_223965739.1;Name=WP_223965739.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228913.1;locus_tag=LDO09_RS09615;product=GTPase ObgE;protein_id=WP_223965739.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1772746 1773003 . - . ID=gene-LDO09_RS09620;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LDO09_RS09620;old_locus_tag=TthAA11_18980 NZ_AP024926.1 Protein Homology CDS 1772746 1773003 . - 0 ID=cds-WP_008633580.1;Parent=gene-LDO09_RS09620;Dbxref=Genbank:WP_008633580.1;Name=WP_008633580.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328532.1;locus_tag=LDO09_RS09620;product=50S ribosomal protein L27;protein_id=WP_008633580.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1773007 1773312 . - . ID=gene-LDO09_RS09625;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LDO09_RS09625;old_locus_tag=TthAA11_18990 NZ_AP024926.1 Protein Homology CDS 1773007 1773312 . - 0 ID=cds-WP_008633581.1;Parent=gene-LDO09_RS09625;Dbxref=Genbank:WP_008633581.1;Name=WP_008633581.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633581.1;locus_tag=LDO09_RS09625;product=50S ribosomal protein L21;protein_id=WP_008633581.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1773410 1773485 . - . ID=gene-LDO09_RS09630;Name=LDO09_RS09630;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS09630;old_locus_tag=TthAA11_t00430 NZ_AP024926.1 tRNAscan-SE tRNA 1773410 1773485 . - . ID=rna-LDO09_RS09630;Parent=gene-LDO09_RS09630;anticodon=(pos:complement(1773450..1773452));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS09630;product=tRNA-Ala NZ_AP024926.1 tRNAscan-SE exon 1773410 1773485 . - . ID=exon-LDO09_RS09630-1;Parent=rna-LDO09_RS09630;anticodon=(pos:complement(1773450..1773452));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS09630;product=tRNA-Ala NZ_AP024926.1 RefSeq gene 1773522 1773749 . - . ID=gene-LDO09_RS09635;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LDO09_RS09635;old_locus_tag=TthAA11_19000 NZ_AP024926.1 Protein Homology CDS 1773522 1773749 . - 0 ID=cds-WP_008633583.1;Parent=gene-LDO09_RS09635;Dbxref=Genbank:WP_008633583.1;Name=WP_008633583.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: protein motif:HMM:TIGR00810.1;locus_tag=LDO09_RS09635;product=preprotein translocase subunit SecG;protein_id=WP_008633583.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1773819 1773893 . + . ID=gene-LDO09_RS09640;Name=LDO09_RS09640;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS09640;old_locus_tag=TthAA11_t00440 NZ_AP024926.1 tRNAscan-SE tRNA 1773819 1773893 . + . ID=rna-LDO09_RS09640;Parent=gene-LDO09_RS09640;anticodon=(pos:1773851..1773853);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS09640;product=tRNA-Thr NZ_AP024926.1 tRNAscan-SE exon 1773819 1773893 . + . ID=exon-LDO09_RS09640-1;Parent=rna-LDO09_RS09640;anticodon=(pos:1773851..1773853);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS09640;product=tRNA-Thr NZ_AP024926.1 RefSeq gene 1773969 1775081 . - . ID=gene-LDO09_RS09645;Name=LDO09_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09645;old_locus_tag=TthAA11_19010 NZ_AP024926.1 Protein Homology CDS 1773969 1775081 . - 0 ID=cds-WP_223966766.1;Parent=gene-LDO09_RS09645;Dbxref=Genbank:WP_223966766.1;Name=WP_223966766.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018460836.1;locus_tag=LDO09_RS09645;product=tyrosine-type recombinase/integrase;protein_id=WP_223966766.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1775168 1775548 . - . ID=gene-LDO09_RS09650;Name=LDO09_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09650;old_locus_tag=TthAA11_19020 NZ_AP024926.1 Protein Homology CDS 1775168 1775548 . - 0 ID=cds-WP_126186909.1;Parent=gene-LDO09_RS09650;Dbxref=Genbank:WP_126186909.1;Name=WP_126186909.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013561.2;locus_tag=LDO09_RS09650;product=ribbon-helix-helix domain-containing protein;protein_id=WP_126186909.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1775652 1775906 . + . ID=gene-LDO09_RS09655;Name=LDO09_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09655;old_locus_tag=TthAA11_19030 NZ_AP024926.1 Protein Homology CDS 1775652 1775906 . + 0 ID=cds-WP_143586998.1;Parent=gene-LDO09_RS09655;Dbxref=Genbank:WP_143586998.1;Name=WP_143586998.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024139.2;locus_tag=LDO09_RS09655;product=helix-turn-helix domain-containing protein;protein_id=WP_143586998.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1775893 1776174 . + . ID=gene-LDO09_RS09660;Name=LDO09_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09660;old_locus_tag=TthAA11_19040 NZ_AP024926.1 Protein Homology CDS 1775893 1776174 . + 0 ID=cds-WP_093007989.1;Parent=gene-LDO09_RS09660;Dbxref=Genbank:WP_093007989.1;Name=WP_093007989.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024139.2;locus_tag=LDO09_RS09660;product=helix-turn-helix domain-containing protein;protein_id=WP_093007989.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1776184 1776465 . + . ID=gene-LDO09_RS09665;Name=LDO09_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09665;old_locus_tag=TthAA11_19050 NZ_AP024926.1 GeneMarkS-2+ CDS 1776184 1776465 . + 0 ID=cds-WP_018460833.1;Parent=gene-LDO09_RS09665;Dbxref=Genbank:WP_018460833.1;Name=WP_018460833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS09665;product=hypothetical protein;protein_id=WP_018460833.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1776469 1776813 . + . ID=gene-LDO09_RS09670;Name=LDO09_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09670;old_locus_tag=TthAA11_19060 NZ_AP024926.1 GeneMarkS-2+ CDS 1776469 1776813 . + 0 ID=cds-WP_223968736.1;Parent=gene-LDO09_RS09670;Dbxref=Genbank:WP_223968736.1;Name=WP_223968736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS09670;product=hypothetical protein;protein_id=WP_223968736.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1776820 1778040 . + . ID=gene-LDO09_RS09675;Name=LDO09_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09675;old_locus_tag=TthAA11_19070 NZ_AP024926.1 Protein Homology CDS 1776820 1778040 . + 0 ID=cds-WP_143586034.1-2;Parent=gene-LDO09_RS09675;Dbxref=Genbank:WP_143586034.1;Name=WP_143586034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1;locus_tag=LDO09_RS09675;product=IS256-like element ISTth4 family transposase;protein_id=WP_143586034.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1778508 1779290 . + . ID=gene-LDO09_RS09680;Name=LDO09_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09680;old_locus_tag=TthAA11_19090 NZ_AP024926.1 Protein Homology CDS 1778508 1779290 . + 0 ID=cds-WP_223965741.1;Parent=gene-LDO09_RS09680;Dbxref=Genbank:WP_223965741.1;Name=WP_223965741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330256.1;locus_tag=LDO09_RS09680;product=toprim domain-containing protein;protein_id=WP_223965741.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1779277 1780758 . + . ID=gene-LDO09_RS09685;Name=LDO09_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09685;old_locus_tag=TthAA11_19100 NZ_AP024926.1 Protein Homology CDS 1779277 1780758 . + 0 ID=cds-WP_018460830.1;Parent=gene-LDO09_RS09685;Dbxref=Genbank:WP_018460830.1;Name=WP_018460830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330255.1;locus_tag=LDO09_RS09685;product=YfjI family protein;protein_id=WP_018460830.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1781595 1782041 . - . ID=gene-LDO09_RS09690;Name=LDO09_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09690;old_locus_tag=TthAA11_19120 NZ_AP024926.1 Protein Homology CDS 1781595 1782041 . - 0 ID=cds-WP_018460827.1;Parent=gene-LDO09_RS09690;Dbxref=Genbank:WP_018460827.1;Name=WP_018460827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048409.1;locus_tag=LDO09_RS09690;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_018460827.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1782038 1782187 . - . ID=gene-LDO09_RS09695;Name=LDO09_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09695;old_locus_tag=TthAA11_19130 NZ_AP024926.1 Protein Homology CDS 1782038 1782187 . - 0 ID=cds-WP_018460826.1;Parent=gene-LDO09_RS09695;Dbxref=Genbank:WP_018460826.1;Name=WP_018460826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018460826.1;locus_tag=LDO09_RS09695;product=hypothetical protein;protein_id=WP_018460826.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1782394 1784364 . + . ID=gene-LDO09_RS09700;Name=LDO09_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09700;old_locus_tag=TthAA11_19140 NZ_AP024926.1 Protein Homology CDS 1782394 1784364 . + 0 ID=cds-WP_018460825.1;Parent=gene-LDO09_RS09700;Dbxref=Genbank:WP_018460825.1;Name=WP_018460825.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330252.1;locus_tag=LDO09_RS09700;product=AAA family ATPase;protein_id=WP_018460825.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1784675 1787551 . + . ID=gene-LDO09_RS09705;Name=LDO09_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09705;old_locus_tag=TthAA11_19150 NZ_AP024926.1 Protein Homology CDS 1784675 1787551 . + 0 ID=cds-WP_014628990.1;Parent=gene-LDO09_RS09705;Dbxref=Genbank:WP_014628990.1;Name=WP_014628990.1;Ontology_term=GO:0006396,GO:0008452;gbkey=CDS;go_function=RNA ligase activity|0008452||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: protein motif:HMM:NF013319.2;locus_tag=LDO09_RS09705;product=RtcB family protein;protein_id=WP_014628990.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1787686 1789149 . + . ID=gene-LDO09_RS09710;Name=LDO09_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09710;old_locus_tag=TthAA11_19160 NZ_AP024926.1 Protein Homology CDS 1787686 1789149 . + 0 ID=cds-WP_143586650.1;Parent=gene-LDO09_RS09710;Dbxref=Genbank:WP_143586650.1;Name=WP_143586650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228916.1;locus_tag=LDO09_RS09710;product=phosphodiester glycosidase family protein;protein_id=WP_143586650.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1789166 1790086 . + . ID=gene-LDO09_RS09715;Name=LDO09_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09715;old_locus_tag=TthAA11_19170 NZ_AP024926.1 Protein Homology CDS 1789166 1790086 . + 0 ID=cds-WP_143586653.1;Parent=gene-LDO09_RS09715;Dbxref=Genbank:WP_143586653.1;Name=WP_143586653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228917.1;locus_tag=LDO09_RS09715;product=hypothetical protein;protein_id=WP_143586653.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1790064 1790393 . - . ID=gene-LDO09_RS09720;Name=LDO09_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09720;old_locus_tag=TthAA11_19180 NZ_AP024926.1 Protein Homology CDS 1790064 1790393 . - 0 ID=cds-WP_011173813.1;Parent=gene-LDO09_RS09720;Dbxref=Genbank:WP_011173813.1;Name=WP_011173813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173813.1;locus_tag=LDO09_RS09720;product=hypothetical protein;protein_id=WP_011173813.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1790422 1790895 . - . ID=gene-LDO09_RS09725;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=LDO09_RS09725;old_locus_tag=TthAA11_19190 NZ_AP024926.1 Protein Homology CDS 1790422 1790895 . - 0 ID=cds-WP_143586655.1;Parent=gene-LDO09_RS09725;Dbxref=Genbank:WP_143586655.1;Name=WP_143586655.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630272.1;locus_tag=LDO09_RS09725;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_143586655.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1790905 1791504 . - . ID=gene-LDO09_RS09730;Name=LDO09_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09730;old_locus_tag=TthAA11_19200 NZ_AP024926.1 Protein Homology CDS 1790905 1791504 . - 0 ID=cds-WP_143586657.1;Parent=gene-LDO09_RS09730;Dbxref=Genbank:WP_143586657.1;Name=WP_143586657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173815.1;locus_tag=LDO09_RS09730;product=trimeric intracellular cation channel family protein;protein_id=WP_143586657.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1791497 1791955 . - . ID=gene-LDO09_RS09735;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=LDO09_RS09735;old_locus_tag=TthAA11_19220 NZ_AP024926.1 Protein Homology CDS 1791497 1791955 . - 0 ID=cds-WP_011228919.1;Parent=gene-LDO09_RS09735;Dbxref=Genbank:WP_011228919.1;Name=WP_011228919.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173816.1;locus_tag=LDO09_RS09735;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_011228919.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1791972 1792529 . + . ID=gene-LDO09_RS09740;Name=LDO09_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09740;old_locus_tag=TthAA11_19230 NZ_AP024926.1 Protein Homology CDS 1791972 1792529 . + 0 ID=cds-WP_143586659.1;Parent=gene-LDO09_RS09740;Dbxref=Genbank:WP_143586659.1;Name=WP_143586659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510856.1;locus_tag=LDO09_RS09740;product=HDIG domain-containing protein;protein_id=WP_143586659.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1792588 1792908 . + . ID=gene-LDO09_RS09745;Name=LDO09_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09745;old_locus_tag=TthAA11_19240 NZ_AP024926.1 Protein Homology CDS 1792588 1792908 . + 0 ID=cds-WP_038035626.1;Parent=gene-LDO09_RS09745;Dbxref=Genbank:WP_038035626.1;Name=WP_038035626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015715984.1;locus_tag=LDO09_RS09745;product=FUN14 domain-containing protein;protein_id=WP_038035626.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1792895 1793962 . - . ID=gene-LDO09_RS09750;Name=LDO09_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09750;old_locus_tag=TthAA11_19250 NZ_AP024926.1 Protein Homology CDS 1792895 1793962 . - 0 ID=cds-WP_014630274.1;Parent=gene-LDO09_RS09750;Dbxref=Genbank:WP_014630274.1;Name=WP_014630274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173819.1;locus_tag=LDO09_RS09750;product=YbfB/YjiJ family MFS transporter;protein_id=WP_014630274.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1793952 1794278 . - . ID=gene-LDO09_RS09755;Name=LDO09_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09755;old_locus_tag=TthAA11_19260 NZ_AP024926.1 Protein Homology CDS 1793952 1794278 . - 0 ID=cds-WP_008633725.1;Parent=gene-LDO09_RS09755;Dbxref=Genbank:WP_008633725.1;Name=WP_008633725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633725.1;locus_tag=LDO09_RS09755;product=nucleotide pyrophosphohydrolase;protein_id=WP_008633725.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1794445 1794825 . + . ID=gene-LDO09_RS09760;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=LDO09_RS09760;old_locus_tag=TthAA11_19270 NZ_AP024926.1 Protein Homology CDS 1794445 1794825 . + 0 ID=cds-WP_011228922.1;Parent=gene-LDO09_RS09760;Dbxref=Genbank:WP_011228922.1;Name=WP_011228922.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228922.1;locus_tag=LDO09_RS09760;product=methylglyoxal synthase;protein_id=WP_011228922.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1794873 1795301 . + . ID=gene-LDO09_RS09765;Name=LDO09_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09765;old_locus_tag=TthAA11_19280 NZ_AP024926.1 Protein Homology CDS 1794873 1795301 . + 0 ID=cds-WP_223965748.1;Parent=gene-LDO09_RS09765;Dbxref=Genbank:WP_223965748.1;Name=WP_223965748.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716070.1;locus_tag=LDO09_RS09765;product=NUDIX domain-containing protein;protein_id=WP_223965748.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1795312 1796532 . + . ID=gene-LDO09_RS09770;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=LDO09_RS09770;old_locus_tag=TthAA11_19290 NZ_AP024926.1 Protein Homology CDS 1795312 1796532 . + 0 ID=cds-WP_143586661.1;Parent=gene-LDO09_RS09770;Dbxref=Genbank:WP_143586661.1;Name=WP_143586661.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173822.1;locus_tag=LDO09_RS09770;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_143586661.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1796519 1797823 . + . ID=gene-LDO09_RS09775;Name=LDO09_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09775;old_locus_tag=TthAA11_19300 NZ_AP024926.1 Protein Homology CDS 1796519 1797823 . + 0 ID=cds-WP_143586663.1;Parent=gene-LDO09_RS09775;Dbxref=Genbank:WP_143586663.1;Name=WP_143586663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461168.1;locus_tag=LDO09_RS09775;product=amidase;protein_id=WP_143586663.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1797816 1799006 . - . ID=gene-LDO09_RS09780;Name=LDO09_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09780;old_locus_tag=TthAA11_19310 NZ_AP024926.1 Protein Homology CDS 1797816 1799006 . - 0 ID=cds-WP_143586665.1;Parent=gene-LDO09_RS09780;Dbxref=Genbank:WP_143586665.1;Name=WP_143586665.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630279.1;locus_tag=LDO09_RS09780;product=SLC13 family permease;protein_id=WP_143586665.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1798984 1799574 . - . ID=gene-LDO09_RS09785;Name=LDO09_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09785;old_locus_tag=TthAA11_19320 NZ_AP024926.1 Protein Homology CDS 1798984 1799574 . - 0 ID=cds-WP_143586667.1;Parent=gene-LDO09_RS09785;Dbxref=Genbank:WP_143586667.1;Name=WP_143586667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173825.1;locus_tag=LDO09_RS09785;product=GNAT family protein;protein_id=WP_143586667.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1799595 1800656 . + . ID=gene-LDO09_RS09790;Name=LDO09_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09790;old_locus_tag=TthAA11_19330 NZ_AP024926.1 Protein Homology CDS 1799595 1800656 . + 0 ID=cds-WP_143586669.1;Parent=gene-LDO09_RS09790;Dbxref=Genbank:WP_143586669.1;Name=WP_143586669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633736.1;locus_tag=LDO09_RS09790;product=M28 family peptidase;protein_id=WP_143586669.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1800667 1800743 . + . ID=gene-LDO09_RS09795;Name=LDO09_RS09795;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS09795;old_locus_tag=TthAA11_t00450 NZ_AP024926.1 tRNAscan-SE tRNA 1800667 1800743 . + . ID=rna-LDO09_RS09795;Parent=gene-LDO09_RS09795;anticodon=(pos:1800701..1800703);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS09795;product=tRNA-Met NZ_AP024926.1 tRNAscan-SE exon 1800667 1800743 . + . ID=exon-LDO09_RS09795-1;Parent=rna-LDO09_RS09795;anticodon=(pos:1800701..1800703);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS09795;product=tRNA-Met NZ_AP024926.1 RefSeq gene 1800797 1801039 . + . ID=gene-LDO09_RS09800;Name=LDO09_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09800;old_locus_tag=TthAA11_19340 NZ_AP024926.1 Protein Homology CDS 1800797 1801039 . + 0 ID=cds-WP_014630283.1;Parent=gene-LDO09_RS09800;Dbxref=Genbank:WP_014630283.1;Name=WP_014630283.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013494.2;locus_tag=LDO09_RS09800;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_014630283.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1801052 1801429 . + . ID=gene-LDO09_RS09805;Name=LDO09_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09805;old_locus_tag=TthAA11_19350 NZ_AP024926.1 Protein Homology CDS 1801052 1801429 . + 0 ID=cds-WP_011173828.1;Parent=gene-LDO09_RS09805;Dbxref=Genbank:WP_011173828.1;Name=WP_011173828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510866.1;locus_tag=LDO09_RS09805;product=acyl-CoA thioesterase;protein_id=WP_011173828.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1801413 1801745 . + . ID=gene-LDO09_RS09810;Name=LDO09_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09810;old_locus_tag=TthAA11_19360 NZ_AP024926.1 Protein Homology CDS 1801413 1801745 . + 0 ID=cds-WP_143586671.1;Parent=gene-LDO09_RS09810;Dbxref=Genbank:WP_143586671.1;Name=WP_143586671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228929.1;locus_tag=LDO09_RS09810;product=DCC1-like thiol-disulfide oxidoreductase family protein;protein_id=WP_143586671.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1801711 1802514 . + . ID=gene-LDO09_RS09815;Name=LDO09_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09815;old_locus_tag=TthAA11_19370 NZ_AP024926.1 Protein Homology CDS 1801711 1802514 . + 0 ID=cds-WP_143586673.1;Parent=gene-LDO09_RS09815;Dbxref=Genbank:WP_143586673.1;Name=WP_143586673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510868.1;locus_tag=LDO09_RS09815;product=DNA-formamidopyrimidine glycosylase;protein_id=WP_143586673.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1802511 1804001 . - . ID=gene-LDO09_RS09820;Name=LDO09_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09820;old_locus_tag=TthAA11_19380 NZ_AP024926.1 Protein Homology CDS 1802511 1804001 . - 0 ID=cds-WP_143586675.1;Parent=gene-LDO09_RS09820;Dbxref=Genbank:WP_143586675.1;Name=WP_143586675.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633745.1;locus_tag=LDO09_RS09820;product=ABC transporter permease subunit;protein_id=WP_143586675.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1804008 1805042 . - . ID=gene-LDO09_RS09825;Name=LDO09_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09825;old_locus_tag=TthAA11_19390 NZ_AP024926.1 Protein Homology CDS 1804008 1805042 . - 0 ID=cds-WP_011228931.1;Parent=gene-LDO09_RS09825;Dbxref=Genbank:WP_011228931.1;Name=WP_011228931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228931.1;locus_tag=LDO09_RS09825;product=thiamine ABC transporter substrate-binding protein;protein_id=WP_011228931.1;transl_table=11 NZ_AP024926.1 cmsearch riboswitch 1805065 1805158 . - . ID=id-NZ_AP024926.1:1805065..1805158;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024926.1 RefSeq gene 1805159 1806019 . - . ID=gene-LDO09_RS09830;Name=LDO09_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09830;old_locus_tag=TthAA11_19400 NZ_AP024926.1 Protein Homology CDS 1805159 1806019 . - 0 ID=cds-WP_143586677.1;Parent=gene-LDO09_RS09830;Dbxref=Genbank:WP_143586677.1;Name=WP_143586677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228932.1;locus_tag=LDO09_RS09830;product=alpha/beta hydrolase;protein_id=WP_143586677.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1805989 1806228 . - . ID=gene-LDO09_RS09835;Name=LDO09_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09835;old_locus_tag=TthAA11_19410 NZ_AP024926.1 Protein Homology CDS 1805989 1806228 . - 0 ID=cds-WP_143586679.1;Parent=gene-LDO09_RS09835;Dbxref=Genbank:WP_143586679.1;Name=WP_143586679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633749.1;locus_tag=LDO09_RS09835;product=hypothetical protein;protein_id=WP_143586679.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1806225 1806827 . - . ID=gene-LDO09_RS09840;Name=LDO09_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09840;old_locus_tag=TthAA11_19420 NZ_AP024926.1 Protein Homology CDS 1806225 1806827 . - 0 ID=cds-WP_124105329.1;Parent=gene-LDO09_RS09840;Dbxref=Genbank:WP_124105329.1;Name=WP_124105329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173835.1;locus_tag=LDO09_RS09840;product=fuculose-1-phosphate aldolase;protein_id=WP_124105329.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1806891 1811465 . - . ID=gene-LDO09_RS09845;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LDO09_RS09845;old_locus_tag=TthAA11_19430 NZ_AP024926.1 Protein Homology CDS 1806891 1811465 . - 0 ID=cds-WP_223965753.1;Parent=gene-LDO09_RS09845;Dbxref=Genbank:WP_223965753.1;Name=WP_223965753.1;gbkey=CDS;gene=rpoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228934.1;locus_tag=LDO09_RS09845;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_223965753.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1811495 1814854 . - . ID=gene-LDO09_RS09850;Name=LDO09_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09850;old_locus_tag=TthAA11_19440 NZ_AP024926.1 Protein Homology CDS 1811495 1814854 . - 0 ID=cds-WP_143586683.1;Parent=gene-LDO09_RS09850;Dbxref=Genbank:WP_143586683.1;Name=WP_143586683.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0032549;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,ribonucleoside binding|0032549||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328467.1;locus_tag=LDO09_RS09850;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_143586683.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1815044 1815685 . - . ID=gene-LDO09_RS09855;Name=LDO09_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09855;old_locus_tag=TthAA11_19450 NZ_AP024926.1 Protein Homology CDS 1815044 1815685 . - 0 ID=cds-WP_143586686.1;Parent=gene-LDO09_RS09855;Dbxref=Genbank:WP_143586686.1;Name=WP_143586686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630292.1;locus_tag=LDO09_RS09855;product=RNA-binding protein;protein_id=WP_143586686.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1815685 1816113 . - . ID=gene-LDO09_RS09860;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LDO09_RS09860;old_locus_tag=TthAA11_19460 NZ_AP024926.1 Protein Homology CDS 1815685 1816113 . - 0 ID=cds-WP_011173839.1;Parent=gene-LDO09_RS09860;Dbxref=Genbank:WP_011173839.1;Name=WP_011173839.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633757.1;locus_tag=LDO09_RS09860;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_011173839.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1816120 1817157 . - . ID=gene-LDO09_RS09865;Name=LDO09_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09865;old_locus_tag=TthAA11_19470 NZ_AP024926.1 Protein Homology CDS 1816120 1817157 . - 0 ID=cds-WP_011173840.1;Parent=gene-LDO09_RS09865;Dbxref=Genbank:WP_011173840.1;Name=WP_011173840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510876.1;locus_tag=LDO09_RS09865;product=rod shape-determining protein;protein_id=WP_011173840.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1817169 1818893 . - . ID=gene-LDO09_RS09870;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=LDO09_RS09870;old_locus_tag=TthAA11_19480 NZ_AP024926.1 Protein Homology CDS 1817169 1818893 . - 0 ID=cds-WP_014630294.1;Parent=gene-LDO09_RS09870;Dbxref=Genbank:WP_014630294.1;Name=WP_014630294.1;Ontology_term=GO:0006402,GO:0004521;gbkey=CDS;gene=rny;go_function=endoribonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111130.1;locus_tag=LDO09_RS09870;product=ribonuclease Y;protein_id=WP_014630294.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1818894 1819916 . - . ID=gene-LDO09_RS09875;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LDO09_RS09875;old_locus_tag=TthAA11_19490 NZ_AP024926.1 Protein Homology CDS 1818894 1819916 . - 0 ID=cds-WP_143586689.1;Parent=gene-LDO09_RS09875;Dbxref=Genbank:WP_143586689.1;Name=WP_143586689.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: protein motif:HMM:TIGR02012.1;locus_tag=LDO09_RS09875;product=recombinase RecA;protein_id=WP_143586689.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1819867 1820463 . - . ID=gene-LDO09_RS09880;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=LDO09_RS09880;old_locus_tag=TthAA11_19500 NZ_AP024926.1 Protein Homology CDS 1819867 1820463 . - 0 ID=cds-WP_011173843.1;Parent=gene-LDO09_RS09880;Dbxref=Genbank:WP_011173843.1;Name=WP_011173843.1;Ontology_term=GO:0008033,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'-5'-RNA ligase activity|0008664||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173843.1;locus_tag=LDO09_RS09880;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_011173843.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1820460 1821644 . - . ID=gene-LDO09_RS09885;Name=LDO09_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09885;old_locus_tag=TthAA11_19510 NZ_AP024926.1 Protein Homology CDS 1820460 1821644 . - 0 ID=cds-WP_223968738.1;Parent=gene-LDO09_RS09885;Dbxref=Genbank:WP_223968738.1;Name=WP_223968738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228938.1;locus_tag=LDO09_RS09885;product=CinA family nicotinamide mononucleotide deamidase-related protein;protein_id=WP_223968738.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1821617 1822393 . - . ID=gene-LDO09_RS09890;Name=LDO09_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09890;old_locus_tag=TthAA11_19520 NZ_AP024926.1 Protein Homology CDS 1821617 1822393 . - 0 ID=cds-WP_223968740.1;Parent=gene-LDO09_RS09890;Dbxref=Genbank:WP_223968740.1;Name=WP_223968740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510880.1;locus_tag=LDO09_RS09890;product=glycine cleavage system protein T;protein_id=WP_223968740.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1822433 1823482 . + . ID=gene-LDO09_RS09895;Name=LDO09_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09895;old_locus_tag=TthAA11_19530 NZ_AP024926.1 Protein Homology CDS 1822433 1823482 . + 0 ID=cds-WP_143586693.1;Parent=gene-LDO09_RS09895;Dbxref=Genbank:WP_143586693.1;Name=WP_143586693.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173846.1;locus_tag=LDO09_RS09895;product=MFS transporter;protein_id=WP_143586693.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1823475 1824101 . + . ID=gene-LDO09_RS09900;Name=LDO09_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09900;old_locus_tag=TthAA11_19540 NZ_AP024926.1 Protein Homology CDS 1823475 1824101 . + 0 ID=cds-WP_143586695.1;Parent=gene-LDO09_RS09900;Dbxref=Genbank:WP_143586695.1;Name=WP_143586695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716330.1;locus_tag=LDO09_RS09900;product=HAD family phosphatase;protein_id=WP_143586695.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1824087 1825172 . - . ID=gene-LDO09_RS09905;Name=LDO09_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09905;old_locus_tag=TthAA11_19550 NZ_AP024926.1 Protein Homology CDS 1824087 1825172 . - 0 ID=cds-WP_172619214.1;Parent=gene-LDO09_RS09905;Dbxref=Genbank:WP_172619214.1;Name=WP_172619214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630300.1;locus_tag=LDO09_RS09905;product=enolase;protein_id=WP_172619214.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1825222 1825932 . - . ID=gene-LDO09_RS09910;Name=LDO09_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09910;old_locus_tag=TthAA11_19560 NZ_AP024926.1 Protein Homology CDS 1825222 1825932 . - 0 ID=cds-WP_143586699.1;Parent=gene-LDO09_RS09910;Dbxref=Genbank:WP_143586699.1;Name=WP_143586699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630301.1;locus_tag=LDO09_RS09910;product=hypothetical protein;protein_id=WP_143586699.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1825965 1826462 . + . ID=gene-LDO09_RS09915;Name=LDO09_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09915;old_locus_tag=TthAA11_19570 NZ_AP024926.1 Protein Homology CDS 1825965 1826462 . + 0 ID=cds-WP_143586701.1;Parent=gene-LDO09_RS09915;Dbxref=Genbank:WP_143586701.1;Name=WP_143586701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633771.1;locus_tag=LDO09_RS09915;product=bioflim formation protein;protein_id=WP_143586701.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1826466 1827311 . + . ID=gene-LDO09_RS09920;Name=LDO09_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09920;old_locus_tag=TthAA11_19580 NZ_AP024926.1 Protein Homology CDS 1826466 1827311 . + 0 ID=cds-WP_014630303.1;Parent=gene-LDO09_RS09920;Dbxref=Genbank:WP_014630303.1;Name=WP_014630303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633773.1;locus_tag=LDO09_RS09920;product=sugar ABC transporter permease;protein_id=WP_014630303.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1827290 1828309 . - . ID=gene-LDO09_RS09925;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=LDO09_RS09925;old_locus_tag=TthAA11_19590 NZ_AP024926.1 Protein Homology CDS 1827290 1828309 . - 0 ID=cds-WP_172619215.1;Parent=gene-LDO09_RS09925;Dbxref=Genbank:WP_172619215.1;Name=WP_172619215.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633775.1;locus_tag=LDO09_RS09925;product=endolytic transglycosylase MltG;protein_id=WP_172619215.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1828293 1828700 . - . ID=gene-LDO09_RS09930;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LDO09_RS09930;old_locus_tag=TthAA11_19600 NZ_AP024926.1 Protein Homology CDS 1828293 1828700 . - 0 ID=cds-WP_011173853.1;Parent=gene-LDO09_RS09930;Dbxref=Genbank:WP_011173853.1;Name=WP_011173853.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510888.1;locus_tag=LDO09_RS09930;product=Holliday junction resolvase RuvX;protein_id=WP_011173853.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1828681 1829364 . - . ID=gene-LDO09_RS09935;Name=LDO09_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09935;old_locus_tag=TthAA11_19610 NZ_AP024926.1 Protein Homology CDS 1828681 1829364 . - 0 ID=cds-WP_143586703.1;Parent=gene-LDO09_RS09935;Dbxref=Genbank:WP_143586703.1;Name=WP_143586703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228944.1;locus_tag=LDO09_RS09935;product=hypothetical protein;protein_id=WP_143586703.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1829374 1832022 . - . ID=gene-LDO09_RS09940;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LDO09_RS09940;old_locus_tag=TthAA11_19620 NZ_AP024926.1 Protein Homology CDS 1829374 1832022 . - 0 ID=cds-WP_223968742.1;Parent=gene-LDO09_RS09940;Dbxref=Genbank:WP_223968742.1;Name=WP_223968742.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510890.1;locus_tag=LDO09_RS09940;product=alanine--tRNA ligase;protein_id=WP_223968742.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1832046 1832330 . + . ID=gene-LDO09_RS09945;Name=LDO09_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09945;old_locus_tag=TthAA11_19630 NZ_AP024926.1 Protein Homology CDS 1832046 1832330 . + 0 ID=cds-WP_223965764.1;Parent=gene-LDO09_RS09945;Dbxref=Genbank:WP_223965764.1;Name=WP_223965764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633778.1;locus_tag=LDO09_RS09945;product=NIPSNAP family containing protein;protein_id=WP_223965764.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1832375 1833517 . + . ID=gene-LDO09_RS09950;Name=LDO09_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09950;old_locus_tag=TthAA11_19640 NZ_AP024926.1 Protein Homology CDS 1832375 1833517 . + 0 ID=cds-WP_143586707.1;Parent=gene-LDO09_RS09950;Dbxref=Genbank:WP_143586707.1;Name=WP_143586707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630307.1;locus_tag=LDO09_RS09950;product=ABC transporter permease;protein_id=WP_143586707.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1833518 1834201 . + . ID=gene-LDO09_RS09955;Name=LDO09_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09955;old_locus_tag=TthAA11_19650 NZ_AP024926.1 Protein Homology CDS 1833518 1834201 . + 0 ID=cds-WP_143586710.1;Parent=gene-LDO09_RS09955;Dbxref=Genbank:WP_143586710.1;Name=WP_143586710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173858.1;locus_tag=LDO09_RS09955;product=ABC transporter ATP-binding protein;protein_id=WP_143586710.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1834249 1835580 . + . ID=gene-LDO09_RS09960;Name=LDO09_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09960;old_locus_tag=TthAA11_19660 NZ_AP024926.1 Protein Homology CDS 1834249 1835580 . + 0 ID=cds-WP_223965765.1;Parent=gene-LDO09_RS09960;Dbxref=Genbank:WP_223965765.1;Name=WP_223965765.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510893.1;locus_tag=LDO09_RS09960;product=FAD-dependent oxidoreductase;protein_id=WP_223965765.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1835727 1837034 . + . ID=gene-LDO09_RS09965;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=LDO09_RS09965;old_locus_tag=TthAA11_19670 NZ_AP024926.1 Protein Homology CDS 1835727 1837034 . + 0 ID=cds-WP_143586714.1;Parent=gene-LDO09_RS09965;Dbxref=Genbank:WP_143586714.1;Name=WP_143586714.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173860.1;locus_tag=LDO09_RS09965;product=isocitrate lyase;protein_id=WP_143586714.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1837107 1839863 . + . ID=gene-LDO09_RS09970;Name=LDO09_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09970;old_locus_tag=TthAA11_19680 NZ_AP024926.1 Protein Homology CDS 1837107 1839863 . + 0 ID=cds-WP_143586716.1;Parent=gene-LDO09_RS09970;Dbxref=Genbank:WP_143586716.1;Name=WP_143586716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173861.1;locus_tag=LDO09_RS09970;product=hypothetical protein;protein_id=WP_143586716.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1839946 1840698 . + . ID=gene-LDO09_RS09975;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=LDO09_RS09975;old_locus_tag=TthAA11_19690 NZ_AP024926.1 Protein Homology CDS 1839946 1840698 . + 0 ID=cds-WP_011173862.1;Parent=gene-LDO09_RS09975;Dbxref=Genbank:WP_011173862.1;Name=WP_011173862.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630312.1;locus_tag=LDO09_RS09975;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_011173862.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1840695 1842101 . + . ID=gene-LDO09_RS09980;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=LDO09_RS09980;old_locus_tag=TthAA11_19700 NZ_AP024926.1 Protein Homology CDS 1840695 1842101 . + 0 ID=cds-WP_014630313.1;Parent=gene-LDO09_RS09980;Dbxref=Genbank:WP_014630313.1;Name=WP_014630313.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufB;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_171491688.1;locus_tag=LDO09_RS09980;product=Fe-S cluster assembly protein SufB;protein_id=WP_014630313.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1842154 1843449 . + . ID=gene-LDO09_RS09985;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=LDO09_RS09985;old_locus_tag=TthAA11_19710 NZ_AP024926.1 Protein Homology CDS 1842154 1843449 . + 0 ID=cds-WP_143586718.1;Parent=gene-LDO09_RS09985;Dbxref=Genbank:WP_143586718.1;Name=WP_143586718.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufD;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510898.1;locus_tag=LDO09_RS09985;product=Fe-S cluster assembly protein SufD;protein_id=WP_143586718.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1843452 1843754 . + . ID=gene-LDO09_RS09990;Name=LDO09_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS09990;old_locus_tag=TthAA11_19720 NZ_AP024926.1 Protein Homology CDS 1843452 1843754 . + 0 ID=cds-WP_011173865.1;Parent=gene-LDO09_RS09990;Dbxref=Genbank:WP_011173865.1;Name=WP_011173865.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173865.1;locus_tag=LDO09_RS09990;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_011173865.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1843751 1844740 . - . ID=gene-LDO09_RS09995;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=LDO09_RS09995;old_locus_tag=TthAA11_19730 NZ_AP024926.1 Protein Homology CDS 1843751 1844740 . - 0 ID=cds-WP_143586720.1;Parent=gene-LDO09_RS09995;Dbxref=Genbank:WP_143586720.1;Name=WP_143586720.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173866.1;locus_tag=LDO09_RS09995;product=anthranilate phosphoribosyltransferase;protein_id=WP_143586720.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1844728 1845309 . - . ID=gene-LDO09_RS10000;Name=LDO09_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10000;old_locus_tag=TthAA11_19740 NZ_AP024926.1 Protein Homology CDS 1844728 1845309 . - 0 ID=cds-WP_172619216.1;Parent=gene-LDO09_RS10000;Dbxref=Genbank:WP_172619216.1;Name=WP_172619216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014514854.1;locus_tag=LDO09_RS10000;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_172619216.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1845388 1846776 . - . ID=gene-LDO09_RS10005;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=LDO09_RS10005;old_locus_tag=TthAA11_19750 NZ_AP024926.1 Protein Homology CDS 1845388 1846776 . - 0 ID=cds-WP_143586724.1;Parent=gene-LDO09_RS10005;Dbxref=Genbank:WP_143586724.1;Name=WP_143586724.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173868.1;locus_tag=LDO09_RS10005;product=anthranilate synthase component I;protein_id=WP_143586724.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1846913 1847314 . - . ID=gene-LDO09_RS10010;Name=LDO09_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10010;old_locus_tag=TthAA11_19760 NZ_AP024926.1 Protein Homology CDS 1846913 1847314 . - 0 ID=cds-WP_143586726.1;Parent=gene-LDO09_RS10010;Dbxref=Genbank:WP_143586726.1;Name=WP_143586726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630318.1;locus_tag=LDO09_RS10010;product=thioesterase family protein;protein_id=WP_143586726.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1847353 1849617 . + . ID=gene-LDO09_RS10015;Name=LDO09_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10015;old_locus_tag=TthAA11_19770 NZ_AP024926.1 GeneMarkS-2+ CDS 1847353 1849617 . + 0 ID=cds-WP_143586728.1;Parent=gene-LDO09_RS10015;Dbxref=Genbank:WP_143586728.1;Name=WP_143586728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS10015;product=hypothetical protein;protein_id=WP_143586728.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1849687 1851108 . + . ID=gene-LDO09_RS10020;Name=LDO09_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10020;old_locus_tag=TthAA11_19780 NZ_AP024926.1 Protein Homology CDS 1849687 1851108 . + 0 ID=cds-WP_143586730.1;Parent=gene-LDO09_RS10020;Dbxref=Genbank:WP_143586730.1;Name=WP_143586730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228956.1;locus_tag=LDO09_RS10020;product=hypothetical protein;protein_id=WP_143586730.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1851187 1852008 . + . ID=gene-LDO09_RS10025;Name=LDO09_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10025;old_locus_tag=TthAA11_19790 NZ_AP024926.1 GeneMarkS-2+ CDS 1851187 1852008 . + 0 ID=cds-WP_197735233.1;Parent=gene-LDO09_RS10025;Dbxref=Genbank:WP_197735233.1;Name=WP_197735233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS10025;product=hypothetical protein;protein_id=WP_197735233.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1852045 1852500 . + . ID=gene-LDO09_RS10030;Name=LDO09_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10030;old_locus_tag=TthAA11_19800 NZ_AP024926.1 GeneMarkS-2+ CDS 1852045 1852500 . + 0 ID=cds-WP_143586732.1;Parent=gene-LDO09_RS10030;Dbxref=Genbank:WP_143586732.1;Name=WP_143586732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS10030;product=hypothetical protein;protein_id=WP_143586732.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1852526 1854217 . + . ID=gene-LDO09_RS10035;Name=LDO09_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10035;old_locus_tag=TthAA11_19810 NZ_AP024926.1 Protein Homology CDS 1852526 1854217 . + 0 ID=cds-WP_223968744.1;Parent=gene-LDO09_RS10035;Dbxref=Genbank:WP_223968744.1;Name=WP_223968744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228959.1;locus_tag=LDO09_RS10035;product=M3 family oligoendopeptidase;protein_id=WP_223968744.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1854242 1854694 . + . ID=gene-LDO09_RS10040;Name=LDO09_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10040;old_locus_tag=TthAA11_19820 NZ_AP024926.1 Protein Homology CDS 1854242 1854694 . + 0 ID=cds-WP_143586736.1;Parent=gene-LDO09_RS10040;Dbxref=Genbank:WP_143586736.1;Name=WP_143586736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510905.1;locus_tag=LDO09_RS10040;product=arsenate reductase ArsC;protein_id=WP_143586736.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1854691 1855353 . - . ID=gene-LDO09_RS10045;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LDO09_RS10045;old_locus_tag=TthAA11_19830 NZ_AP024926.1 Protein Homology CDS 1854691 1855353 . - 0 ID=cds-WP_242004659.1;Parent=gene-LDO09_RS10045;Dbxref=Genbank:WP_242004659.1;Name=WP_242004659.1;Ontology_term=GO:0042372,GO:0052624;gbkey=CDS;gene=ubiE;go_function=2-phytyl-1%2C4-naphthoquinone methyltransferase activity|0052624||IEA;go_process=phylloquinone biosynthetic process|0042372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630322.1;locus_tag=LDO09_RS10045;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_242004659.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1855445 1857259 . + . ID=gene-LDO09_RS10050;Name=LDO09_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10050;old_locus_tag=TthAA11_19840 NZ_AP024926.1 Protein Homology CDS 1855445 1857259 . + 0 ID=cds-WP_143586740.1;Parent=gene-LDO09_RS10050;Dbxref=Genbank:WP_143586740.1;Name=WP_143586740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633808.1;locus_tag=LDO09_RS10050;product=ABC transporter permease;protein_id=WP_143586740.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1857256 1858179 . + . ID=gene-LDO09_RS10055;Name=LDO09_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10055;old_locus_tag=TthAA11_19850 NZ_AP024926.1 Protein Homology CDS 1857256 1858179 . + 0 ID=cds-WP_014630324.1;Parent=gene-LDO09_RS10055;Dbxref=Genbank:WP_014630324.1;Name=WP_014630324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630324.1;locus_tag=LDO09_RS10055;product=ABC transporter permease;protein_id=WP_014630324.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1858167 1858424 . - . ID=gene-LDO09_RS10060;Name=LDO09_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10060;old_locus_tag=TthAA11_19860 NZ_AP024926.1 Protein Homology CDS 1858167 1858424 . - 0 ID=cds-WP_143586744.1;Parent=gene-LDO09_RS10060;Dbxref=Genbank:WP_143586744.1;Name=WP_143586744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173881.1;locus_tag=LDO09_RS10060;product=hypothetical protein;protein_id=WP_143586744.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1858421 1858957 . - . ID=gene-LDO09_RS10065;Name=LDO09_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10065;old_locus_tag=TthAA11_19870 NZ_AP024926.1 Protein Homology CDS 1858421 1858957 . - 0 ID=cds-WP_143586746.1;Parent=gene-LDO09_RS10065;Dbxref=Genbank:WP_143586746.1;Name=WP_143586746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633811.1;locus_tag=LDO09_RS10065;product=flavin reductase family protein;protein_id=WP_143586746.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1858954 1859721 . - . ID=gene-LDO09_RS10070;Name=ricT;gbkey=Gene;gene=ricT;gene_biotype=protein_coding;locus_tag=LDO09_RS10070;old_locus_tag=TthAA11_19880 NZ_AP024926.1 Protein Homology CDS 1858954 1859721 . - 0 ID=cds-WP_143586748.1;Parent=gene-LDO09_RS10070;Dbxref=Genbank:WP_143586748.1;Name=WP_143586748.1;gbkey=CDS;gene=ricT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633812.1;locus_tag=LDO09_RS10070;product=regulatory iron-sulfur-containing complex subunit RicT;protein_id=WP_143586748.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1859718 1860524 . - . ID=gene-LDO09_RS10075;Name=LDO09_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10075;old_locus_tag=TthAA11_19890 NZ_AP024926.1 Protein Homology CDS 1859718 1860524 . - 0 ID=cds-WP_143586750.1;Parent=gene-LDO09_RS10075;Dbxref=Genbank:WP_143586750.1;Name=WP_143586750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228965.1;locus_tag=LDO09_RS10075;product=DNA polymerase III subunit delta';protein_id=WP_143586750.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1860491 1861213 . - . ID=gene-LDO09_RS10080;Name=LDO09_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10080;old_locus_tag=TthAA11_19900 NZ_AP024926.1 Protein Homology CDS 1860491 1861213 . - 0 ID=cds-WP_143586752.1;Parent=gene-LDO09_RS10080;Dbxref=Genbank:WP_143586752.1;Name=WP_143586752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630329.1;locus_tag=LDO09_RS10080;product=metallophosphoesterase family protein;protein_id=WP_143586752.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1861228 1861857 . + . ID=gene-LDO09_RS10085;Name=LDO09_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10085;old_locus_tag=TthAA11_19910 NZ_AP024926.1 Protein Homology CDS 1861228 1861857 . + 0 ID=cds-WP_143586754.1;Parent=gene-LDO09_RS10085;Dbxref=Genbank:WP_143586754.1;Name=WP_143586754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630330.1;locus_tag=LDO09_RS10085;product=hypothetical protein;protein_id=WP_143586754.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1861868 1862068 . + . ID=gene-LDO09_RS10090;Name=LDO09_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10090;old_locus_tag=TthAA11_19920 NZ_AP024926.1 Protein Homology CDS 1861868 1862068 . + 0 ID=cds-WP_143586756.1;Parent=gene-LDO09_RS10090;Dbxref=Genbank:WP_143586756.1;Name=WP_143586756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633824.1;locus_tag=LDO09_RS10090;product=hypothetical protein;protein_id=WP_143586756.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1862065 1863219 . - . ID=gene-LDO09_RS10095;Name=LDO09_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10095;old_locus_tag=TthAA11_19930 NZ_AP024926.1 Protein Homology CDS 1862065 1863219 . - 0 ID=cds-WP_143586758.1;Parent=gene-LDO09_RS10095;Dbxref=Genbank:WP_143586758.1;Name=WP_143586758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173887.1;locus_tag=LDO09_RS10095;product=extracellular solute-binding protein;protein_id=WP_143586758.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1863226 1864413 . - . ID=gene-LDO09_RS10100;Name=LDO09_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10100;old_locus_tag=TthAA11_19940 NZ_AP024926.1 Protein Homology CDS 1863226 1864413 . - 0 ID=cds-WP_143586760.1;Parent=gene-LDO09_RS10100;Dbxref=Genbank:WP_143586760.1;Name=WP_143586760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173888.1;locus_tag=LDO09_RS10100;product=ABC transporter substrate-binding protein;protein_id=WP_143586760.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1864424 1865206 . - . ID=gene-LDO09_RS10105;Name=LDO09_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10105;old_locus_tag=TthAA11_19950 NZ_AP024926.1 Protein Homology CDS 1864424 1865206 . - 0 ID=cds-WP_143586762.1;Parent=gene-LDO09_RS10105;Dbxref=Genbank:WP_143586762.1;Name=WP_143586762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173889.1;locus_tag=LDO09_RS10105;product=repressor in the phenylacetic acid catabolic pathway protein;protein_id=WP_143586762.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1865210 1867189 . - . ID=gene-LDO09_RS10110;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LDO09_RS10110;old_locus_tag=TthAA11_19960 NZ_AP024926.1 Protein Homology CDS 1865210 1867189 . - 0 ID=cds-WP_143586764.1;Parent=gene-LDO09_RS10110;Dbxref=Genbank:WP_143586764.1;Name=WP_143586764.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633828.1;locus_tag=LDO09_RS10110;product=threonine--tRNA ligase;protein_id=WP_143586764.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1867217 1867840 . - . ID=gene-LDO09_RS10115;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LDO09_RS10115;old_locus_tag=TthAA11_19970 NZ_AP024926.1 Protein Homology CDS 1867217 1867840 . - 0 ID=cds-WP_011173891.1;Parent=gene-LDO09_RS10115;Dbxref=Genbank:WP_011173891.1;Name=WP_011173891.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173891.1;locus_tag=LDO09_RS10115;product=GTP cyclohydrolase I FolE;protein_id=WP_011173891.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1867879 1868571 . - . ID=gene-LDO09_RS10120;Name=LDO09_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10120;old_locus_tag=TthAA11_19980 NZ_AP024926.1 Protein Homology CDS 1867879 1868571 . - 0 ID=cds-WP_011173892.1;Parent=gene-LDO09_RS10120;Dbxref=Genbank:WP_011173892.1;Name=WP_011173892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173892.1;locus_tag=LDO09_RS10120;product=gamma carbonic anhydrase family protein;protein_id=WP_011173892.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1868552 1868932 . - . ID=gene-LDO09_RS10125;Name=LDO09_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10125;old_locus_tag=TthAA11_19990 NZ_AP024926.1 Protein Homology CDS 1868552 1868932 . - 0 ID=cds-WP_143586766.1;Parent=gene-LDO09_RS10125;Dbxref=Genbank:WP_143586766.1;Name=WP_143586766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111217.1;locus_tag=LDO09_RS10125;product=NUDIX hydrolase;protein_id=WP_143586766.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1868923 1869786 . - . ID=gene-LDO09_RS10130;Name=LDO09_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10130;old_locus_tag=TthAA11_20000 NZ_AP024926.1 Protein Homology CDS 1868923 1869786 . - 0 ID=cds-WP_143586768.1;Parent=gene-LDO09_RS10130;Dbxref=Genbank:WP_143586768.1;Name=WP_143586768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510913.1;locus_tag=LDO09_RS10130;product=DUF1028 domain-containing protein;protein_id=WP_143586768.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1870123 1870800 . - . ID=gene-LDO09_RS10135;Name=LDO09_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10135;old_locus_tag=TthAA11_20010 NZ_AP024926.1 Protein Homology CDS 1870123 1870800 . - 0 ID=cds-WP_172619217.1;Parent=gene-LDO09_RS10135;Dbxref=Genbank:WP_172619217.1;Name=WP_172619217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173896.1;locus_tag=LDO09_RS10135;product=hypothetical protein;protein_id=WP_172619217.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1870831 1872096 . + . ID=gene-LDO09_RS10140;Name=LDO09_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10140;old_locus_tag=TthAA11_20020 NZ_AP024926.1 Protein Homology CDS 1870831 1872096 . + 0 ID=cds-WP_143586772.1;Parent=gene-LDO09_RS10140;Dbxref=Genbank:WP_143586772.1;Name=WP_143586772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173897.1;locus_tag=LDO09_RS10140;product=replication-associated recombination protein A;protein_id=WP_143586772.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1872047 1872616 . - . ID=gene-LDO09_RS10145;Name=LDO09_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10145;old_locus_tag=TthAA11_20030 NZ_AP024926.1 Protein Homology CDS 1872047 1872616 . - 0 ID=cds-WP_143586774.1;Parent=gene-LDO09_RS10145;Dbxref=Genbank:WP_143586774.1;Name=WP_143586774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173898.1;locus_tag=LDO09_RS10145;product=hypothetical protein;protein_id=WP_143586774.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1872643 1873428 . - . ID=gene-LDO09_RS10150;Name=LDO09_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10150;old_locus_tag=TthAA11_20040 NZ_AP024926.1 Protein Homology CDS 1872643 1873428 . - 0 ID=cds-WP_143586776.1;Parent=gene-LDO09_RS10150;Dbxref=Genbank:WP_143586776.1;Name=WP_143586776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510918.1;locus_tag=LDO09_RS10150;product=carbohydrate ABC transporter permease;protein_id=WP_143586776.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1873459 1874637 . + . ID=gene-LDO09_RS10155;Name=LDO09_RS10155;end_range=1874637,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS10155;old_locus_tag=TthAA11_20050;partial=true;pseudo=true NZ_AP024926.1 Protein Homology CDS 1873459 1874637 . + 0 ID=cds-LDO09_RS10155;Parent=gene-LDO09_RS10155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1874637,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461011.1;locus_tag=LDO09_RS10155;partial=true;product=CoA transferase;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 1874647 1874741 . - . ID=gene-LDO09_RS10160;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LDO09_RS10160 NZ_AP024926.1 cmsearch SRP_RNA 1874647 1874741 . - . ID=rna-LDO09_RS10160;Parent=gene-LDO09_RS10160;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS10160;product=signal recognition particle sRNA small type NZ_AP024926.1 cmsearch exon 1874647 1874741 . - . ID=exon-LDO09_RS10160-1;Parent=rna-LDO09_RS10160;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LDO09_RS10160;product=signal recognition particle sRNA small type NZ_AP024926.1 RefSeq gene 1874761 1875639 . + . ID=gene-LDO09_RS10165;Name=LDO09_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10165;old_locus_tag=TthAA11_20060 NZ_AP024926.1 Protein Homology CDS 1874761 1875639 . + 0 ID=cds-WP_143586778.1;Parent=gene-LDO09_RS10165;Dbxref=Genbank:WP_143586778.1;Name=WP_143586778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173901.1;locus_tag=LDO09_RS10165;product=ABC transporter ATP-binding protein;protein_id=WP_143586778.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1875632 1876402 . + . ID=gene-LDO09_RS10170;Name=LDO09_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10170;old_locus_tag=TthAA11_20070 NZ_AP024926.1 Protein Homology CDS 1875632 1876402 . + 0 ID=cds-WP_143586779.1;Parent=gene-LDO09_RS10170;Dbxref=Genbank:WP_143586779.1;Name=WP_143586779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718277.1;locus_tag=LDO09_RS10170;product=ABC transporter permease;protein_id=WP_143586779.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1876399 1877463 . - . ID=gene-LDO09_RS10175;Name=LDO09_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10175;old_locus_tag=TthAA11_20080 NZ_AP024926.1 Protein Homology CDS 1876399 1877463 . - 0 ID=cds-WP_143590097.1;Parent=gene-LDO09_RS10175;Dbxref=Genbank:WP_143590097.1;Name=WP_143590097.1;Ontology_term=GO:0006508,GO:0004177;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228989.1;locus_tag=LDO09_RS10175;product=aminopeptidase;protein_id=WP_143590097.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1877484 1878503 . + . ID=gene-LDO09_RS10180;Name=LDO09_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10180;old_locus_tag=TthAA11_20090 NZ_AP024926.1 Protein Homology CDS 1877484 1878503 . + 0 ID=cds-WP_143586781.1;Parent=gene-LDO09_RS10180;Dbxref=Genbank:WP_143586781.1;Name=WP_143586781.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228990.1;locus_tag=LDO09_RS10180;product=E3 binding domain-containing protein;protein_id=WP_143586781.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1878511 1880511 . - . ID=gene-LDO09_RS10185;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LDO09_RS10185;old_locus_tag=TthAA11_20100 NZ_AP024926.1 Protein Homology CDS 1878511 1880511 . - 0 ID=cds-WP_143586783.1;Parent=gene-LDO09_RS10185;Dbxref=Genbank:WP_143586783.1;Name=WP_143586783.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228991.1;locus_tag=LDO09_RS10185;product=excinuclease ABC subunit UvrB;protein_id=WP_143586783.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1880607 1883378 . - . ID=gene-LDO09_RS10190;Name=LDO09_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10190;old_locus_tag=TthAA11_20110 NZ_AP024926.1 Protein Homology CDS 1880607 1883378 . - 0 ID=cds-WP_143586785.1;Parent=gene-LDO09_RS10190;Dbxref=Genbank:WP_143586785.1;Name=WP_143586785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228992.1;locus_tag=LDO09_RS10190;product=S-layer homology domain-containing protein;protein_id=WP_143586785.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1883884 1885698 . + . ID=gene-LDO09_RS10195;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO09_RS10195;old_locus_tag=TthAA11_20120 NZ_AP024926.1 Protein Homology CDS 1883884 1885698 . + 0 ID=cds-WP_143586787.1;Parent=gene-LDO09_RS10195;Dbxref=Genbank:WP_143586787.1;Name=WP_143586787.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630348.1;locus_tag=LDO09_RS10195;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_143586787.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1885744 1885819 . + . ID=gene-LDO09_RS10200;Name=LDO09_RS10200;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS10200;old_locus_tag=TthAA11_t00460 NZ_AP024926.1 tRNAscan-SE tRNA 1885744 1885819 . + . ID=rna-LDO09_RS10200;Parent=gene-LDO09_RS10200;anticodon=(pos:1885777..1885779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS10200;product=tRNA-Trp NZ_AP024926.1 tRNAscan-SE exon 1885744 1885819 . + . ID=exon-LDO09_RS10200-1;Parent=rna-LDO09_RS10200;anticodon=(pos:1885777..1885779);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS10200;product=tRNA-Trp NZ_AP024926.1 RefSeq gene 1885866 1886564 . + . ID=gene-LDO09_RS10205;Name=LDO09_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10205;old_locus_tag=TthAA11_20130 NZ_AP024926.1 Protein Homology CDS 1885866 1886564 . + 0 ID=cds-WP_124105288.1;Parent=gene-LDO09_RS10205;Dbxref=Genbank:WP_124105288.1;Name=WP_124105288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630349.1;locus_tag=LDO09_RS10205;product=FAD-dependent oxidoreductase;protein_id=WP_124105288.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1886481 1887458 . - . ID=gene-LDO09_RS10210;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LDO09_RS10210;old_locus_tag=TthAA11_20140 NZ_AP024926.1 Protein Homology CDS 1886481 1887458 . - 0 ID=cds-WP_143586789.1;Parent=gene-LDO09_RS10210;Dbxref=Genbank:WP_143586789.1;Name=WP_143586789.1;gbkey=CDS;gene=mutY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173909.1;locus_tag=LDO09_RS10210;product=A/G-specific adenine glycosylase MutY;protein_id=WP_143586789.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1887461 1887883 . - . ID=gene-LDO09_RS10215;Name=LDO09_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10215;old_locus_tag=TthAA11_20150 NZ_AP024926.1 Protein Homology CDS 1887461 1887883 . - 0 ID=cds-WP_143586791.1;Parent=gene-LDO09_RS10215;Dbxref=Genbank:WP_143586791.1;Name=WP_143586791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173910.1;locus_tag=LDO09_RS10215;product=CoA-binding protein;protein_id=WP_143586791.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1887880 1888725 . - . ID=gene-LDO09_RS10220;Name=LDO09_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10220;old_locus_tag=TthAA11_20160 NZ_AP024926.1 Protein Homology CDS 1887880 1888725 . - 0 ID=cds-WP_014510930.1;Parent=gene-LDO09_RS10220;Dbxref=Genbank:WP_014510930.1;Name=WP_014510930.1;Ontology_term=GO:0009435,GO:0008795;gbkey=CDS;go_function=NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516485.1;locus_tag=LDO09_RS10220;product=NAD+ synthase;protein_id=WP_014510930.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1888712 1889590 . - . ID=gene-LDO09_RS10225;Name=LDO09_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10225;old_locus_tag=TthAA11_20170 NZ_AP024926.1 Protein Homology CDS 1888712 1889590 . - 0 ID=cds-WP_143586793.1;Parent=gene-LDO09_RS10225;Dbxref=Genbank:WP_143586793.1;Name=WP_143586793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510931.1;locus_tag=LDO09_RS10225;product=beta-ureidopropionase;protein_id=WP_143586793.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1889590 1891152 . - . ID=gene-LDO09_RS10230;Name=LDO09_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10230;old_locus_tag=TthAA11_20180 NZ_AP024926.1 Protein Homology CDS 1889590 1891152 . - 0 ID=cds-WP_143586795.1;Parent=gene-LDO09_RS10230;Dbxref=Genbank:WP_143586795.1;Name=WP_143586795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630354.1;locus_tag=LDO09_RS10230;product=DUF1957 domain-containing protein;protein_id=WP_143586795.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1891157 1891966 . - . ID=gene-LDO09_RS10235;Name=LDO09_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10235;old_locus_tag=TthAA11_20190 NZ_AP024926.1 Protein Homology CDS 1891157 1891966 . - 0 ID=cds-WP_143586797.1;Parent=gene-LDO09_RS10235;Dbxref=Genbank:WP_143586797.1;Name=WP_143586797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716124.1;locus_tag=LDO09_RS10235;product=[LysW]-aminoadipate kinase;protein_id=WP_143586797.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1892026 1893060 . - . ID=gene-LDO09_RS10240;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LDO09_RS10240;old_locus_tag=TthAA11_20200 NZ_AP024926.1 Protein Homology CDS 1892026 1893060 . - 0 ID=cds-WP_143586799.1;Parent=gene-LDO09_RS10240;Dbxref=Genbank:WP_143586799.1;Name=WP_143586799.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173916.1;locus_tag=LDO09_RS10240;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_143586799.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1893053 1893898 . - . ID=gene-LDO09_RS10245;Name=lysX;gbkey=Gene;gene=lysX;gene_biotype=protein_coding;locus_tag=LDO09_RS10245;old_locus_tag=TthAA11_20210 NZ_AP024926.1 Protein Homology CDS 1893053 1893898 . - 0 ID=cds-WP_143586801.1;Parent=gene-LDO09_RS10245;Dbxref=Genbank:WP_143586801.1;Name=WP_143586801.1;gbkey=CDS;gene=lysX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516490.1;locus_tag=LDO09_RS10245;product=lysine biosynthesis protein LysX;protein_id=WP_143586801.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1894003 1894167 . - . ID=gene-LDO09_RS10250;Name=lysW;gbkey=Gene;gene=lysW;gene_biotype=protein_coding;locus_tag=LDO09_RS10250;old_locus_tag=TthAA11_20220 NZ_AP024926.1 Protein Homology CDS 1894003 1894167 . - 0 ID=cds-WP_011229005.1;Parent=gene-LDO09_RS10250;Dbxref=Genbank:WP_011229005.1;Name=WP_011229005.1;Ontology_term=GO:0019878;gbkey=CDS;gene=lysW;go_process=lysine biosynthetic process via aminoadipic acid|0019878||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229005.1;locus_tag=LDO09_RS10250;product=lysine biosynthesis protein LysW;protein_id=WP_011229005.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1894161 1894475 . - . ID=gene-LDO09_RS10255;Name=LDO09_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10255;old_locus_tag=TthAA11_20230 NZ_AP024926.1 Protein Homology CDS 1894161 1894475 . - 0 ID=cds-WP_014630358.1;Parent=gene-LDO09_RS10255;Dbxref=Genbank:WP_014630358.1;Name=WP_014630358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550470.1;locus_tag=LDO09_RS10255;product=paraquat-inducible protein A;protein_id=WP_014630358.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1894485 1894976 . - . ID=gene-LDO09_RS10260;Name=LDO09_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10260;old_locus_tag=TthAA11_20240 NZ_AP024926.1 Protein Homology CDS 1894485 1894976 . - 0 ID=cds-WP_143586803.1;Parent=gene-LDO09_RS10260;Dbxref=Genbank:WP_143586803.1;Name=WP_143586803.1;Note=catalyzes the formation of homoisocitrate from cis-homoaconitate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173920.1;locus_tag=LDO09_RS10260;product=homoaconitate hydratase;protein_id=WP_143586803.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1894969 1896225 . - . ID=gene-LDO09_RS10265;Name=LDO09_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10265;old_locus_tag=TthAA11_20250 NZ_AP024926.1 Protein Homology CDS 1894969 1896225 . - 0 ID=cds-WP_172619218.1;Parent=gene-LDO09_RS10265;Dbxref=Genbank:WP_172619218.1;Name=WP_172619218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630360.1;locus_tag=LDO09_RS10265;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_172619218.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1896248 1896472 . + . ID=gene-LDO09_RS10270;Name=LDO09_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10270 NZ_AP024926.1 Protein Homology CDS 1896248 1896472 . + 0 ID=cds-WP_011229009.1;Parent=gene-LDO09_RS10270;Dbxref=Genbank:WP_011229009.1;Name=WP_011229009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229009.1;locus_tag=LDO09_RS10270;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_011229009.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1896462 1896668 . + . ID=gene-LDO09_RS10275;Name=LDO09_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10275;old_locus_tag=TthAA11_20270 NZ_AP024926.1 Protein Homology CDS 1896462 1896668 . + 0 ID=cds-WP_008633873.1;Parent=gene-LDO09_RS10275;Dbxref=Genbank:WP_008633873.1;Name=WP_008633873.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229010.1;locus_tag=LDO09_RS10275;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_008633873.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1896671 1897801 . - . ID=gene-LDO09_RS10280;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LDO09_RS10280;old_locus_tag=TthAA11_20280 NZ_AP024926.1 Protein Homology CDS 1896671 1897801 . - 0 ID=cds-WP_014510939.1;Parent=gene-LDO09_RS10280;Dbxref=Genbank:WP_014510939.1;Name=WP_014510939.1;gbkey=CDS;gene=lysS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016330127.1;locus_tag=LDO09_RS10280;product=homocitrate synthase;protein_id=WP_014510939.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1897945 1898736 . - . ID=gene-LDO09_RS10285;Name=LDO09_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10285;old_locus_tag=TthAA11_20290 NZ_AP024926.1 Protein Homology CDS 1897945 1898736 . - 0 ID=cds-WP_143586806.1;Parent=gene-LDO09_RS10285;Dbxref=Genbank:WP_143586806.1;Name=WP_143586806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229011.1;locus_tag=LDO09_RS10285;product=isoprenyl transferase;protein_id=WP_143586806.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1898772 1899890 . - . ID=gene-LDO09_RS10290;Name=LDO09_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10290;old_locus_tag=TthAA11_20300 NZ_AP024926.1 Protein Homology CDS 1898772 1899890 . - 0 ID=cds-WP_143586808.1;Parent=gene-LDO09_RS10290;Dbxref=Genbank:WP_143586808.1;Name=WP_143586808.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716113.1;locus_tag=LDO09_RS10290;product=acyl-CoA dehydrogenase family protein;protein_id=WP_143586808.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1899928 1900494 . - . ID=gene-LDO09_RS10295;Name=LDO09_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10295;old_locus_tag=TthAA11_20310 NZ_AP024926.1 Protein Homology CDS 1899928 1900494 . - 0 ID=cds-WP_143586810.1;Parent=gene-LDO09_RS10295;Dbxref=Genbank:WP_143586810.1;Name=WP_143586810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510940.1;locus_tag=LDO09_RS10295;product=UbiX family flavin prenyltransferase;protein_id=WP_143586810.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1900504 1901718 . - . ID=gene-LDO09_RS10300;Name=LDO09_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10300;old_locus_tag=TthAA11_20320 NZ_AP024926.1 Protein Homology CDS 1900504 1901718 . - 0 ID=cds-WP_143586812.1;Parent=gene-LDO09_RS10300;Dbxref=Genbank:WP_143586812.1;Name=WP_143586812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630364.1;locus_tag=LDO09_RS10300;product=DUF4127 family protein;protein_id=WP_143586812.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1901726 1902703 . - . ID=gene-LDO09_RS10305;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LDO09_RS10305;old_locus_tag=TthAA11_20330 NZ_AP024926.1 Protein Homology CDS 1901726 1902703 . - 0 ID=cds-WP_014630365.1;Parent=gene-LDO09_RS10305;Dbxref=Genbank:WP_014630365.1;Name=WP_014630365.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630365.1;locus_tag=LDO09_RS10305;product=thioredoxin-disulfide reductase;protein_id=WP_014630365.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1902847 1902922 . - . ID=gene-LDO09_RS10310;Name=LDO09_RS10310;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS10310;old_locus_tag=TthAA11_t00470 NZ_AP024926.1 tRNAscan-SE tRNA 1902847 1902922 . - . ID=rna-LDO09_RS10310;Parent=gene-LDO09_RS10310;anticodon=(pos:complement(1902886..1902888));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS10310;product=tRNA-Glu NZ_AP024926.1 tRNAscan-SE exon 1902847 1902922 . - . ID=exon-LDO09_RS10310-1;Parent=rna-LDO09_RS10310;anticodon=(pos:complement(1902886..1902888));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS10310;product=tRNA-Glu NZ_AP024926.1 RefSeq gene 1902943 1903017 . - . ID=gene-LDO09_RS10315;Name=LDO09_RS10315;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS10315;old_locus_tag=TthAA11_t00480 NZ_AP024926.1 tRNAscan-SE tRNA 1902943 1903017 . - . ID=rna-LDO09_RS10315;Parent=gene-LDO09_RS10315;anticodon=(pos:complement(1902982..1902984));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS10315;product=tRNA-Glu NZ_AP024926.1 tRNAscan-SE exon 1902943 1903017 . - . ID=exon-LDO09_RS10315-1;Parent=rna-LDO09_RS10315;anticodon=(pos:complement(1902982..1902984));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS10315;product=tRNA-Glu NZ_AP024926.1 RefSeq gene 1903024 1903097 . - . ID=gene-LDO09_RS10320;Name=LDO09_RS10320;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS10320;old_locus_tag=TthAA11_t00490 NZ_AP024926.1 tRNAscan-SE tRNA 1903024 1903097 . - . ID=rna-LDO09_RS10320;Parent=gene-LDO09_RS10320;anticodon=(pos:complement(1903063..1903065));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS10320;product=tRNA-Gln NZ_AP024926.1 tRNAscan-SE exon 1903024 1903097 . - . ID=exon-LDO09_RS10320-1;Parent=rna-LDO09_RS10320;anticodon=(pos:complement(1903063..1903065));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS10320;product=tRNA-Gln NZ_AP024926.1 RefSeq gene 1903168 1903764 . + . ID=gene-LDO09_RS10325;Name=LDO09_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10325;old_locus_tag=TthAA11_20340 NZ_AP024926.1 Protein Homology CDS 1903168 1903764 . + 0 ID=cds-WP_143586814.1;Parent=gene-LDO09_RS10325;Dbxref=Genbank:WP_143586814.1;Name=WP_143586814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630366.1;locus_tag=LDO09_RS10325;product=hypothetical protein;protein_id=WP_143586814.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1903761 1905431 . + . ID=gene-LDO09_RS10330;Name=LDO09_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10330;old_locus_tag=TthAA11_20350 NZ_AP024926.1 Protein Homology CDS 1903761 1905431 . + 0 ID=cds-WP_143586816.1;Parent=gene-LDO09_RS10330;Dbxref=Genbank:WP_143586816.1;Name=WP_143586816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630367.1;locus_tag=LDO09_RS10330;product=hypothetical protein;protein_id=WP_143586816.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1905495 1905593 . - . ID=gene-LDO09_RS10335;Name=LDO09_RS10335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS10335;partial=true;pseudo=true;start_range=.,1905495 NZ_AP024926.1 Protein Homology CDS 1905495 1905593 . - 0 ID=cds-LDO09_RS10335;Parent=gene-LDO09_RS10335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173933.1;locus_tag=LDO09_RS10335;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,1905495;transl_table=11 NZ_AP024926.1 RefSeq gene 1905630 1905905 . + . ID=gene-LDO09_RS10340;Name=LDO09_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10340;old_locus_tag=TthAA11_20370 NZ_AP024926.1 Protein Homology CDS 1905630 1905905 . + 0 ID=cds-WP_014510947.1;Parent=gene-LDO09_RS10340;Dbxref=Genbank:WP_014510947.1;Name=WP_014510947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046282.1;locus_tag=LDO09_RS10340;product=hypothetical protein;protein_id=WP_014510947.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1905902 1906465 . - . ID=gene-LDO09_RS10345;Name=LDO09_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10345;old_locus_tag=TthAA11_20380 NZ_AP024926.1 Protein Homology CDS 1905902 1906465 . - 0 ID=cds-WP_143586818.1;Parent=gene-LDO09_RS10345;Dbxref=Genbank:WP_143586818.1;Name=WP_143586818.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718331.1;locus_tag=LDO09_RS10345;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_143586818.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1906525 1906601 . - . ID=gene-LDO09_RS10350;Name=LDO09_RS10350;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO09_RS10350;old_locus_tag=TthAA11_t00500 NZ_AP024926.1 tRNAscan-SE tRNA 1906525 1906601 . - . ID=rna-LDO09_RS10350;Parent=gene-LDO09_RS10350;anticodon=(pos:complement(1906565..1906567));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS10350;product=tRNA-Arg NZ_AP024926.1 tRNAscan-SE exon 1906525 1906601 . - . ID=exon-LDO09_RS10350-1;Parent=rna-LDO09_RS10350;anticodon=(pos:complement(1906565..1906567));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LDO09_RS10350;product=tRNA-Arg NZ_AP024926.1 RefSeq gene 1906645 1906866 . + . ID=gene-LDO09_RS10355;Name=LDO09_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10355;old_locus_tag=TthAA11_20390 NZ_AP024926.1 Protein Homology CDS 1906645 1906866 . + 0 ID=cds-WP_014510949.1;Parent=gene-LDO09_RS10355;Dbxref=Genbank:WP_014510949.1;Name=WP_014510949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173935.1;locus_tag=LDO09_RS10355;product=hypothetical protein;protein_id=WP_014510949.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1906834 1909311 . - . ID=gene-LDO09_RS10360;Name=LDO09_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10360;old_locus_tag=TthAA11_20400 NZ_AP024926.1 Protein Homology CDS 1906834 1909311 . - 0 ID=cds-WP_223968747.1;Parent=gene-LDO09_RS10360;Dbxref=Genbank:WP_223968747.1;Name=WP_223968747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111918.1;locus_tag=LDO09_RS10360;product=M66 family metalloprotease;protein_id=WP_223968747.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1909372 1910484 . + . ID=gene-LDO09_RS10365;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LDO09_RS10365;old_locus_tag=TthAA11_20410 NZ_AP024926.1 Protein Homology CDS 1909372 1910484 . + 0 ID=cds-WP_143586820.1;Parent=gene-LDO09_RS10365;Dbxref=Genbank:WP_143586820.1;Name=WP_143586820.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633899.1;locus_tag=LDO09_RS10365;product=glutamate 5-kinase;protein_id=WP_143586820.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1910481 1911722 . + . ID=gene-LDO09_RS10370;Name=LDO09_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10370;old_locus_tag=TthAA11_20420 NZ_AP024926.1 Protein Homology CDS 1910481 1911722 . + 0 ID=cds-WP_143586823.1;Parent=gene-LDO09_RS10370;Dbxref=Genbank:WP_143586823.1;Name=WP_143586823.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510951.1;locus_tag=LDO09_RS10370;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_143586823.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1911792 1912589 . + . ID=gene-LDO09_RS10375;Name=LDO09_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10375;old_locus_tag=TthAA11_20430 NZ_AP024926.1 Protein Homology CDS 1911792 1912589 . + 0 ID=cds-WP_041444518.1;Parent=gene-LDO09_RS10375;Dbxref=Genbank:WP_041444518.1;Name=WP_041444518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229022.1;locus_tag=LDO09_RS10375;product=YihY/virulence factor BrkB family protein;protein_id=WP_041444518.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1912679 1913941 . - . ID=gene-LDO09_RS10380;Name=LDO09_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10380;old_locus_tag=TthAA11_20440 NZ_AP024926.1 Protein Homology CDS 1912679 1913941 . - 0 ID=cds-WP_143586825.1;Parent=gene-LDO09_RS10380;Dbxref=Genbank:WP_143586825.1;Name=WP_143586825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173939.1;locus_tag=LDO09_RS10380;product=cytochrome bc complex cytochrome b subunit;protein_id=WP_143586825.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1913951 1914583 . - . ID=gene-LDO09_RS10385;Name=LDO09_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10385;old_locus_tag=TthAA11_20450 NZ_AP024926.1 Protein Homology CDS 1913951 1914583 . - 0 ID=cds-WP_143586827.1;Parent=gene-LDO09_RS10385;Dbxref=Genbank:WP_143586827.1;Name=WP_143586827.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173940.1;locus_tag=LDO09_RS10385;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_143586827.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1914592 1915074 . - . ID=gene-LDO09_RS10390;Name=LDO09_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10390;old_locus_tag=TthAA11_20460 NZ_AP024926.1 Protein Homology CDS 1914592 1915074 . - 0 ID=cds-WP_011173941.1;Parent=gene-LDO09_RS10390;Dbxref=Genbank:WP_011173941.1;Name=WP_011173941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510955.1;locus_tag=LDO09_RS10390;product=cytochrome c;protein_id=WP_011173941.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1915085 1915474 . - . ID=gene-LDO09_RS10395;Name=LDO09_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10395 NZ_AP024926.1 Protein Homology CDS 1915085 1915474 . - 0 ID=cds-WP_223969143.1;Parent=gene-LDO09_RS10395;Dbxref=Genbank:WP_223969143.1;Name=WP_223969143.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024834.2;locus_tag=LDO09_RS10395;product=cytochrome c;protein_id=WP_223969143.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1915469 1916197 . - . ID=gene-LDO09_RS10400;Name=LDO09_RS10400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS10400;old_locus_tag=TthAA11_20470;partial=true;pseudo=true;start_range=.,1915469 NZ_AP024926.1 Protein Homology CDS 1915469 1916197 . - 0 ID=cds-LDO09_RS10400;Parent=gene-LDO09_RS10400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633906.1;locus_tag=LDO09_RS10400;partial=true;product=c-type cytochrome;pseudo=true;start_range=.,1915469;transl_table=11 NZ_AP024926.1 RefSeq gene 1916277 1917044 . - . ID=gene-LDO09_RS10405;Name=LDO09_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10405;old_locus_tag=TthAA11_20480 NZ_AP024926.1 Protein Homology CDS 1916277 1917044 . - 0 ID=cds-WP_172619219.1;Parent=gene-LDO09_RS10405;Dbxref=Genbank:WP_172619219.1;Name=WP_172619219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510957.1;locus_tag=LDO09_RS10405;product=sugar phosphate isomerase/epimerase;protein_id=WP_172619219.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1917055 1918149 . - . ID=gene-LDO09_RS10410;Name=LDO09_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10410;old_locus_tag=TthAA11_20490 NZ_AP024926.1 Protein Homology CDS 1917055 1918149 . - 0 ID=cds-WP_143586833.1;Parent=gene-LDO09_RS10410;Dbxref=Genbank:WP_143586833.1;Name=WP_143586833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630380.1;locus_tag=LDO09_RS10410;product=alcohol dehydrogenase family protein;protein_id=WP_143586833.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1918149 1919345 . - . ID=gene-LDO09_RS10415;Name=LDO09_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10415;old_locus_tag=TthAA11_20500 NZ_AP024926.1 Protein Homology CDS 1918149 1919345 . - 0 ID=cds-WP_143586836.1;Parent=gene-LDO09_RS10415;Dbxref=Genbank:WP_143586836.1;Name=WP_143586836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630381.1;locus_tag=LDO09_RS10415;product=ABC transporter substrate-binding protein;protein_id=WP_143586836.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1919387 1920454 . + . ID=gene-LDO09_RS10420;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=LDO09_RS10420;old_locus_tag=TthAA11_20510 NZ_AP024926.1 Protein Homology CDS 1919387 1920454 . + 0 ID=cds-WP_143586838.1;Parent=gene-LDO09_RS10420;Dbxref=Genbank:WP_143586838.1;Name=WP_143586838.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173946.1;locus_tag=LDO09_RS10420;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_143586838.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1920423 1921586 . - . ID=gene-LDO09_RS10425;Name=LDO09_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10425;old_locus_tag=TthAA11_20520 NZ_AP024926.1 Protein Homology CDS 1920423 1921586 . - 0 ID=cds-WP_143586840.1;Parent=gene-LDO09_RS10425;Dbxref=Genbank:WP_143586840.1;Name=WP_143586840.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018462184.1;locus_tag=LDO09_RS10425;product=acyl-CoA dehydrogenase family protein;protein_id=WP_143586840.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1921699 1922166 . - . ID=gene-LDO09_RS10430;Name=LDO09_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10430;old_locus_tag=TthAA11_20530 NZ_AP024926.1 Protein Homology CDS 1921699 1922166 . - 0 ID=cds-WP_143586842.1;Parent=gene-LDO09_RS10430;Dbxref=Genbank:WP_143586842.1;Name=WP_143586842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173948.1;locus_tag=LDO09_RS10430;product=NUDIX hydrolase;protein_id=WP_143586842.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1922166 1923230 . - . ID=gene-LDO09_RS10435;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LDO09_RS10435;old_locus_tag=TthAA11_20540 NZ_AP024926.1 Protein Homology CDS 1922166 1923230 . - 0 ID=cds-WP_143586844.1;Parent=gene-LDO09_RS10435;Dbxref=Genbank:WP_143586844.1;Name=WP_143586844.1;Ontology_term=GO:0006415,GO:0016149;gbkey=CDS;gene=prfA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630384.1;locus_tag=LDO09_RS10435;product=peptide chain release factor 1;protein_id=WP_143586844.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1923296 1924093 . + . ID=gene-LDO09_RS10440;Name=LDO09_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10440;old_locus_tag=TthAA11_20550 NZ_AP024926.1 Protein Homology CDS 1923296 1924093 . + 0 ID=cds-WP_143586846.1;Parent=gene-LDO09_RS10440;Dbxref=Genbank:WP_143586846.1;Name=WP_143586846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633913.1;locus_tag=LDO09_RS10440;product=ZIP family metal transporter;protein_id=WP_143586846.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1924102 1924347 . - . ID=gene-LDO09_RS10445;Name=LDO09_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10445;old_locus_tag=TthAA11_20560 NZ_AP024926.1 Protein Homology CDS 1924102 1924347 . - 0 ID=cds-WP_143586848.1;Parent=gene-LDO09_RS10445;Dbxref=Genbank:WP_143586848.1;Name=WP_143586848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015715996.1;locus_tag=LDO09_RS10445;product=dolichyl-phosphate-mannose-protein mannosyltransferase;protein_id=WP_143586848.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1924349 1924939 . - . ID=gene-LDO09_RS10450;Name=LDO09_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10450;old_locus_tag=TthAA11_20570 NZ_AP024926.1 Protein Homology CDS 1924349 1924939 . - 0 ID=cds-WP_143586850.1;Parent=gene-LDO09_RS10450;Dbxref=Genbank:WP_143586850.1;Name=WP_143586850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015715997.1;locus_tag=LDO09_RS10450;product=SCO family protein;protein_id=WP_143586850.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1924936 1925349 . - . ID=gene-LDO09_RS10455;Name=LDO09_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10455;old_locus_tag=TthAA11_20580 NZ_AP024926.1 Protein Homology CDS 1924936 1925349 . - 0 ID=cds-WP_223968749.1;Parent=gene-LDO09_RS10455;Dbxref=Genbank:WP_223968749.1;Name=WP_223968749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550620.1;locus_tag=LDO09_RS10455;product=copper chaperone PCu(A)C;protein_id=WP_223968749.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1925383 1926603 . - . ID=gene-LDO09_RS10460;Name=LDO09_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10460;old_locus_tag=TthAA11_20590 NZ_AP024926.1 Protein Homology CDS 1925383 1926603 . - 0 ID=cds-WP_143586034.1-3;Parent=gene-LDO09_RS10460;Dbxref=Genbank:WP_143586034.1;Name=WP_143586034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1;locus_tag=LDO09_RS10460;product=IS256-like element ISTth4 family transposase;protein_id=WP_143586034.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1926706 1927893 . + . ID=gene-LDO09_RS10465;Name=LDO09_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10465;old_locus_tag=TthAA11_20600 NZ_AP024926.1 Protein Homology CDS 1926706 1927893 . + 0 ID=cds-WP_223968750.1;Parent=gene-LDO09_RS10465;Dbxref=Genbank:WP_223968750.1;Name=WP_223968750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014514717.1;locus_tag=LDO09_RS10465;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_223968750.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1927875 1928549 . + . ID=gene-LDO09_RS10470;Name=LDO09_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10470;old_locus_tag=TthAA11_20610 NZ_AP024926.1 Protein Homology CDS 1927875 1928549 . + 0 ID=cds-WP_143587009.1;Parent=gene-LDO09_RS10470;Dbxref=Genbank:WP_143587009.1;Name=WP_143587009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716000.1;locus_tag=LDO09_RS10470;product=ABC transporter ATP-binding protein;protein_id=WP_143587009.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1928533 1929228 . + . ID=gene-LDO09_RS10475;Name=LDO09_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10475;old_locus_tag=TthAA11_20620 NZ_AP024926.1 Protein Homology CDS 1928533 1929228 . + 0 ID=cds-WP_143586854.1;Parent=gene-LDO09_RS10475;Dbxref=Genbank:WP_143586854.1;Name=WP_143586854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716001.1;locus_tag=LDO09_RS10475;product=nitrous oxide reductase accessory protein NosL;protein_id=WP_143586854.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1929281 1929784 . + . ID=gene-LDO09_RS10480;Name=LDO09_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10480;old_locus_tag=TthAA11_20630 NZ_AP024926.1 Protein Homology CDS 1929281 1929784 . + 0 ID=cds-WP_143586856.1;Parent=gene-LDO09_RS10480;Dbxref=Genbank:WP_143586856.1;Name=WP_143586856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716002.1;locus_tag=LDO09_RS10480;product=nitrous oxide reductase accessory protein NosL;protein_id=WP_143586856.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1929781 1930530 . + . ID=gene-LDO09_RS10485;Name=LDO09_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10485;old_locus_tag=TthAA11_20640 NZ_AP024926.1 Protein Homology CDS 1929781 1930530 . + 0 ID=cds-WP_143586859.1;Parent=gene-LDO09_RS10485;Dbxref=Genbank:WP_143586859.1;Name=WP_143586859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716003.1;locus_tag=LDO09_RS10485;product=hypothetical protein;protein_id=WP_143586859.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1930539 1930988 . + . ID=gene-LDO09_RS10490;Name=LDO09_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10490;old_locus_tag=TthAA11_20650 NZ_AP024926.1 Protein Homology CDS 1930539 1930988 . + 0 ID=cds-WP_143586861.1;Parent=gene-LDO09_RS10490;Dbxref=Genbank:WP_143586861.1;Name=WP_143586861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716004.1;locus_tag=LDO09_RS10490;product=hypothetical protein;protein_id=WP_143586861.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1930963 1931559 . + . ID=gene-LDO09_RS10495;Name=LDO09_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10495;old_locus_tag=TthAA11_20660 NZ_AP024926.1 Protein Homology CDS 1930963 1931559 . + 0 ID=cds-WP_143586863.1;Parent=gene-LDO09_RS10495;Dbxref=Genbank:WP_143586863.1;Name=WP_143586863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510967.1;locus_tag=LDO09_RS10495;product=MazG family protein;protein_id=WP_143586863.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1931589 1932059 . + . ID=gene-LDO09_RS10500;Name=LDO09_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10500;old_locus_tag=TthAA11_20670 NZ_AP024926.1 Protein Homology CDS 1931589 1932059 . + 0 ID=cds-WP_143586865.1;Parent=gene-LDO09_RS10500;Dbxref=Genbank:WP_143586865.1;Name=WP_143586865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173956.1;locus_tag=LDO09_RS10500;product=CoA pyrophosphatase;protein_id=WP_143586865.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1932022 1932522 . + . ID=gene-LDO09_RS10505;Name=LDO09_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10505;old_locus_tag=TthAA11_20680 NZ_AP024926.1 Protein Homology CDS 1932022 1932522 . + 0 ID=cds-WP_008633926.1;Parent=gene-LDO09_RS10505;Dbxref=Genbank:WP_008633926.1;Name=WP_008633926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633926.1;locus_tag=LDO09_RS10505;product=type 1 glutamine amidotransferase;protein_id=WP_008633926.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1932512 1933258 . - . ID=gene-LDO09_RS10510;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=LDO09_RS10510;old_locus_tag=TthAA11_20690 NZ_AP024926.1 Protein Homology CDS 1932512 1933258 . - 0 ID=cds-WP_143586867.1;Parent=gene-LDO09_RS10510;Dbxref=Genbank:WP_143586867.1;Name=WP_143586867.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173958.1;locus_tag=LDO09_RS10510;product=acetylglutamate kinase;protein_id=WP_143586867.1;transl_table=11 NZ_AP024926.1 RefSeq pseudogene 1933251 1933743 . - . ID=gene-LDO09_RS12140;Name=LDO09_RS12140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS12140;pseudo=true NZ_AP024926.1 Protein Homology CDS 1933251 1933743 . - 0 ID=cds-LDO09_RS12140;Parent=gene-LDO09_RS12140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173959.1;locus_tag=LDO09_RS12140;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AP024926.1 RefSeq gene 1933761 1935350 . + . ID=gene-LDO09_RS10520;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LDO09_RS10520;old_locus_tag=TthAA11_20710 NZ_AP024926.1 Protein Homology CDS 1933761 1935350 . + 0 ID=cds-WP_143586868.1;Parent=gene-LDO09_RS10520;Dbxref=Genbank:WP_143586868.1;Name=WP_143586868.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016328303.1;locus_tag=LDO09_RS10520;product=DNA polymerase III subunit gamma/tau;protein_id=WP_143586868.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1935358 1935639 . + . ID=gene-LDO09_RS10525;Name=LDO09_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10525;old_locus_tag=TthAA11_20720 NZ_AP024926.1 Protein Homology CDS 1935358 1935639 . + 0 ID=cds-WP_008633933.1;Parent=gene-LDO09_RS10525;Dbxref=Genbank:WP_008633933.1;Name=WP_008633933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014514429.1;locus_tag=LDO09_RS10525;product=metal-sensitive transcriptional regulator;protein_id=WP_008633933.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1935640 1936107 . + . ID=gene-LDO09_RS10530;Name=LDO09_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10530;old_locus_tag=TthAA11_20730 NZ_AP024926.1 Protein Homology CDS 1935640 1936107 . + 0 ID=cds-WP_143586870.1;Parent=gene-LDO09_RS10530;Dbxref=Genbank:WP_143586870.1;Name=WP_143586870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630394.1;locus_tag=LDO09_RS10530;product=HD domain-containing protein;protein_id=WP_143586870.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1936158 1938011 . + . ID=gene-LDO09_RS10535;Name=LDO09_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10535;old_locus_tag=TthAA11_20740 NZ_AP024926.1 Protein Homology CDS 1936158 1938011 . + 0 ID=cds-WP_143586872.1;Parent=gene-LDO09_RS10535;Dbxref=Genbank:WP_143586872.1;Name=WP_143586872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630395.1;locus_tag=LDO09_RS10535;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_143586872.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1938013 1938927 . + . ID=gene-LDO09_RS10540;Name=LDO09_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10540;old_locus_tag=TthAA11_20750 NZ_AP024926.1 Protein Homology CDS 1938013 1938927 . + 0 ID=cds-WP_143586874.1;Parent=gene-LDO09_RS10540;Dbxref=Genbank:WP_143586874.1;Name=WP_143586874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550608.1;locus_tag=LDO09_RS10540;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_143586874.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1938924 1940210 . - . ID=gene-LDO09_RS10545;Name=LDO09_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10545;old_locus_tag=TthAA11_20760 NZ_AP024926.1 Protein Homology CDS 1938924 1940210 . - 0 ID=cds-WP_172619220.1;Parent=gene-LDO09_RS10545;Dbxref=Genbank:WP_172619220.1;Name=WP_172619220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630397.1;locus_tag=LDO09_RS10545;product=FAD-binding oxidoreductase;protein_id=WP_172619220.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1940281 1941333 . + . ID=gene-LDO09_RS10550;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LDO09_RS10550;old_locus_tag=TthAA11_20770 NZ_AP024926.1 Protein Homology CDS 1940281 1941333 . + 0 ID=cds-WP_014630398.1;Parent=gene-LDO09_RS10550;Dbxref=Genbank:WP_014630398.1;Name=WP_014630398.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229046.1;locus_tag=LDO09_RS10550;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_014630398.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1941330 1943687 . + . ID=gene-LDO09_RS10555;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LDO09_RS10555;old_locus_tag=TthAA11_20780 NZ_AP024926.1 Protein Homology CDS 1941330 1943687 . + 0 ID=cds-WP_143586878.1;Parent=gene-LDO09_RS10555;Dbxref=Genbank:WP_143586878.1;Name=WP_143586878.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630399.1;locus_tag=LDO09_RS10555;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_143586878.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1943772 1944236 . + . ID=gene-LDO09_RS10560;Name=LDO09_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10560;old_locus_tag=TthAA11_20790 NZ_AP024926.1 Protein Homology CDS 1943772 1944236 . + 0 ID=cds-WP_143586880.1;Parent=gene-LDO09_RS10560;Dbxref=Genbank:WP_143586880.1;Name=WP_143586880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630400.1;locus_tag=LDO09_RS10560;product=hypothetical protein;protein_id=WP_143586880.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1944213 1945181 . - . ID=gene-LDO09_RS10565;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=LDO09_RS10565;old_locus_tag=TthAA11_20800 NZ_AP024926.1 Protein Homology CDS 1944213 1945181 . - 0 ID=cds-WP_143586882.1;Parent=gene-LDO09_RS10565;Dbxref=Genbank:WP_143586882.1;Name=WP_143586882.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015718350.1;locus_tag=LDO09_RS10565;product=6-phosphofructokinase;protein_id=WP_143586882.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1945178 1945972 . - . ID=gene-LDO09_RS10570;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LDO09_RS10570;old_locus_tag=TthAA11_20810 NZ_AP024926.1 Protein Homology CDS 1945178 1945972 . - 0 ID=cds-WP_143586885.1;Parent=gene-LDO09_RS10570;Dbxref=Genbank:WP_143586885.1;Name=WP_143586885.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229050.1;locus_tag=LDO09_RS10570;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_143586885.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1945974 1946468 . - . ID=gene-LDO09_RS10575;Name=LDO09_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10575;old_locus_tag=TthAA11_20820 NZ_AP024926.1 Protein Homology CDS 1945974 1946468 . - 0 ID=cds-WP_014630403.1;Parent=gene-LDO09_RS10575;Dbxref=Genbank:WP_014630403.1;Name=WP_014630403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229051.1;locus_tag=LDO09_RS10575;product=hypothetical protein;protein_id=WP_014630403.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1946531 1947058 . - . ID=gene-LDO09_RS10580;Name=LDO09_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10580;old_locus_tag=TthAA11_20830 NZ_AP024926.1 Protein Homology CDS 1946531 1947058 . - 0 ID=cds-WP_011173971.1;Parent=gene-LDO09_RS10580;Dbxref=Genbank:WP_011173971.1;Name=WP_011173971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173971.1;locus_tag=LDO09_RS10580;product=inorganic diphosphatase;protein_id=WP_011173971.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1947091 1947717 . + . ID=gene-LDO09_RS10585;Name=LDO09_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10585;old_locus_tag=TthAA11_20840 NZ_AP024926.1 Protein Homology CDS 1947091 1947717 . + 0 ID=cds-WP_011173972.1;Parent=gene-LDO09_RS10585;Dbxref=Genbank:WP_011173972.1;Name=WP_011173972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630404.1;locus_tag=LDO09_RS10585;product=YcxB family protein;protein_id=WP_011173972.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1947690 1947998 . + . ID=gene-LDO09_RS10590;Name=LDO09_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10590;old_locus_tag=TthAA11_20850 NZ_AP024926.1 Protein Homology CDS 1947690 1947998 . + 0 ID=cds-WP_024119555.1;Parent=gene-LDO09_RS10590;Dbxref=Genbank:WP_024119555.1;Name=WP_024119555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550771.1;locus_tag=LDO09_RS10590;product=helix-hairpin-helix domain-containing protein;protein_id=WP_024119555.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1947995 1950028 . + . ID=gene-LDO09_RS10595;Name=LDO09_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10595;old_locus_tag=TthAA11_20860 NZ_AP024926.1 Protein Homology CDS 1947995 1950028 . + 0 ID=cds-WP_143586889.1;Parent=gene-LDO09_RS10595;Dbxref=Genbank:WP_143586889.1;Name=WP_143586889.1;Ontology_term=GO:0009290,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510983.1;locus_tag=LDO09_RS10595;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_143586889.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1950016 1950825 . - . ID=gene-LDO09_RS10600;Name=LDO09_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10600;old_locus_tag=TthAA11_20870 NZ_AP024926.1 Protein Homology CDS 1950016 1950825 . - 0 ID=cds-WP_143586891.1;Parent=gene-LDO09_RS10600;Dbxref=Genbank:WP_143586891.1;Name=WP_143586891.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173975.1;locus_tag=LDO09_RS10600;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_143586891.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1950809 1951558 . - . ID=gene-LDO09_RS10605;Name=LDO09_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10605;old_locus_tag=TthAA11_20880 NZ_AP024926.1 Protein Homology CDS 1950809 1951558 . - 0 ID=cds-WP_011173976.1;Parent=gene-LDO09_RS10605;Dbxref=Genbank:WP_011173976.1;Name=WP_011173976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011173976.1;locus_tag=LDO09_RS10605;product=ParA family protein;protein_id=WP_011173976.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1951552 1952301 . - . ID=gene-LDO09_RS10610;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LDO09_RS10610;old_locus_tag=TthAA11_20890 NZ_AP024926.1 Protein Homology CDS 1951552 1952301 . - 0 ID=cds-WP_143586893.1;Parent=gene-LDO09_RS10610;Dbxref=Genbank:WP_143586893.1;Name=WP_143586893.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510986.1;locus_tag=LDO09_RS10610;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_143586893.1;transl_table=11 NZ_AP024926.1 RefSeq gene 1952301 1954094 . - . ID=gene-LDO09_RS10615;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LDO09_RS10615;old_locus_tag=TthAA11_20900 NZ_AP024926.1 Protein Homology CDS 1952301 1954094 . - 0 ID=cds-WP_143586895.1;Parent=gene-LDO09_RS10615;Dbxref=Genbank:WP_143586895.1;Name=WP_143586895.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014510987.1;locus_tag=LDO09_RS10615;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_143586895.1;transl_table=11 ##sequence-region NZ_AP024927.1 1 227954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=274 NZ_AP024927.1 RefSeq region 1 227954 . + . ID=NZ_AP024927.1:1..227954;Dbxref=taxon:274;Is_circular=true;Name=pAA1-1b;collected-by=Natsuki Tomariguchi;collection-date=2017-03-20;country=Japan:Arima Hot Spring;gbkey=Src;genome=plasmid;isolation-source=hot spring water;mol_type=genomic DNA;plasmid-name=pAA1-1b;strain=AA1-1 NZ_AP024927.1 RefSeq gene 1004 1126 . + . ID=gene-LDO09_RS10625;Name=LDO09_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10625 NZ_AP024927.1 Protein Homology CDS 1004 1126 . + 0 ID=cds-WP_231293536.1;Parent=gene-LDO09_RS10625;Dbxref=Genbank:WP_231293536.1;Name=WP_231293536.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=LDO09_RS10625;product=SDR family oxidoreductase;protein_id=WP_231293536.1;transl_table=11 NZ_AP024927.1 RefSeq gene 1144 2211 . - . ID=gene-LDO09_RS10630;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LDO09_RS10630;old_locus_tag=TthAA11_20910 NZ_AP024927.1 Protein Homology CDS 1144 2211 . - 0 ID=cds-WP_223969290.1;Parent=gene-LDO09_RS10630;Dbxref=Genbank:WP_223969290.1;Name=WP_223969290.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174534.1;locus_tag=LDO09_RS10630;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_223969290.1;transl_table=11 NZ_AP024927.1 RefSeq gene 2277 3782 . + . ID=gene-LDO09_RS10635;Name=LDO09_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10635;old_locus_tag=TthAA11_20920 NZ_AP024927.1 Protein Homology CDS 2277 3782 . + 0 ID=cds-WP_223969292.1;Parent=gene-LDO09_RS10635;Dbxref=Genbank:WP_223969292.1;Name=WP_223969292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229222.1;locus_tag=LDO09_RS10635;product=alkaline phosphatase;protein_id=WP_223969292.1;transl_table=11 NZ_AP024927.1 RefSeq gene 3779 5797 . - . ID=gene-LDO09_RS10640;Name=LDO09_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10640;old_locus_tag=TthAA11_20930 NZ_AP024927.1 Protein Homology CDS 3779 5797 . - 0 ID=cds-WP_223969293.1;Parent=gene-LDO09_RS10640;Dbxref=Genbank:WP_223969293.1;Name=WP_223969293.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630539.1;locus_tag=LDO09_RS10640;product=cobyric acid synthase;protein_id=WP_223969293.1;transl_table=11 NZ_AP024927.1 RefSeq gene 5784 6077 . - . ID=gene-LDO09_RS10645;Name=LDO09_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10645;old_locus_tag=TthAA11_20940 NZ_AP024927.1 Protein Homology CDS 5784 6077 . - 0 ID=cds-WP_014511279.1;Parent=gene-LDO09_RS10645;Dbxref=Genbank:WP_014511279.1;Name=WP_014511279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511279.1;locus_tag=LDO09_RS10645;product=HEPN domain-containing protein;protein_id=WP_014511279.1;transl_table=11 NZ_AP024927.1 RefSeq gene 6052 6381 . - . ID=gene-LDO09_RS10650;Name=LDO09_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10650;old_locus_tag=TthAA11_20950 NZ_AP024927.1 Protein Homology CDS 6052 6381 . - 0 ID=cds-WP_014511280.1;Parent=gene-LDO09_RS10650;Dbxref=Genbank:WP_014511280.1;Name=WP_014511280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511280.1;locus_tag=LDO09_RS10650;product=nucleotidyltransferase domain-containing protein;protein_id=WP_014511280.1;transl_table=11 NZ_AP024927.1 RefSeq gene 6378 7376 . - . ID=gene-LDO09_RS10655;Name=LDO09_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10655;old_locus_tag=TthAA11_20960 NZ_AP024927.1 Protein Homology CDS 6378 7376 . - 0 ID=cds-WP_172619248.1;Parent=gene-LDO09_RS10655;Dbxref=Genbank:WP_172619248.1;Name=WP_172619248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631435.1;locus_tag=LDO09_RS10655;product=histidinol-phosphate transaminase;protein_id=WP_172619248.1;transl_table=11 NZ_AP024927.1 RefSeq gene 7422 7751 . - . ID=gene-LDO09_RS10660;Name=LDO09_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10660;old_locus_tag=TthAA11_20970 NZ_AP024927.1 Protein Homology CDS 7422 7751 . - 0 ID=cds-WP_143587319.1;Parent=gene-LDO09_RS10660;Dbxref=Genbank:WP_143587319.1;Name=WP_143587319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511282.1;locus_tag=LDO09_RS10660;product=nucleotidyltransferase domain-containing protein;protein_id=WP_143587319.1;transl_table=11 NZ_AP024927.1 RefSeq gene 7678 8109 . - . ID=gene-LDO09_RS10665;Name=LDO09_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10665;old_locus_tag=TthAA11_20980 NZ_AP024927.1 Protein Homology CDS 7678 8109 . - 0 ID=cds-WP_011229225.1;Parent=gene-LDO09_RS10665;Dbxref=Genbank:WP_011229225.1;Name=WP_011229225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511283.1;locus_tag=LDO09_RS10665;product=HEPN domain-containing protein;protein_id=WP_011229225.1;transl_table=11 NZ_AP024927.1 RefSeq gene 8119 8967 . - . ID=gene-LDO09_RS10670;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=LDO09_RS10670;old_locus_tag=TthAA11_20990 NZ_AP024927.1 Protein Homology CDS 8119 8967 . - 0 ID=cds-WP_223969295.1;Parent=gene-LDO09_RS10670;Dbxref=Genbank:WP_223969295.1;Name=WP_223969295.1;Ontology_term=GO:0009236,GO:0016880;gbkey=CDS;gene=cbiB;go_function=acid-ammonia (or amide) ligase activity|0016880||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631428.1;locus_tag=LDO09_RS10670;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_223969295.1;transl_table=11 NZ_AP024927.1 RefSeq gene 8964 9611 . - . ID=gene-LDO09_RS10675;Name=bluB;gbkey=Gene;gene=bluB;gene_biotype=protein_coding;locus_tag=LDO09_RS10675;old_locus_tag=TthAA11_21000 NZ_AP024927.1 Protein Homology CDS 8964 9611 . - 0 ID=cds-WP_223969297.1;Parent=gene-LDO09_RS10675;Dbxref=Genbank:WP_223969297.1;Name=WP_223969297.1;Ontology_term=GO:0009236,GO:0032363,GO:0016722;gbkey=CDS;gene=bluB;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,FMN catabolic process|0032363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511285.1;locus_tag=LDO09_RS10675;product=5%2C6-dimethylbenzimidazole synthase;protein_id=WP_223969297.1;transl_table=11 NZ_AP024927.1 RefSeq gene 9577 10284 . - . ID=gene-LDO09_RS10680;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LDO09_RS10680;old_locus_tag=TthAA11_21010 NZ_AP024927.1 Protein Homology CDS 9577 10284 . - 0 ID=cds-WP_223969301.1;Parent=gene-LDO09_RS10680;Dbxref=Genbank:WP_223969301.1;Name=WP_223969301.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631424.1;locus_tag=LDO09_RS10680;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_223969301.1;transl_table=11 NZ_AP024927.1 RefSeq gene 10281 10643 . - . ID=gene-LDO09_RS10685;Name=LDO09_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10685;old_locus_tag=TthAA11_21020 NZ_AP024927.1 Protein Homology CDS 10281 10643 . - 0 ID=cds-WP_143587328.1;Parent=gene-LDO09_RS10685;Dbxref=Genbank:WP_143587328.1;Name=WP_143587328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631423.1;locus_tag=LDO09_RS10685;product=DUF3209 family protein;protein_id=WP_143587328.1;transl_table=11 NZ_AP024927.1 RefSeq gene 10644 11747 . - . ID=gene-LDO09_RS10690;Name=LDO09_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10690;old_locus_tag=TthAA11_21030 NZ_AP024927.1 Protein Homology CDS 10644 11747 . - 0 ID=cds-WP_143587330.1;Parent=gene-LDO09_RS10690;Dbxref=Genbank:WP_143587330.1;Name=WP_143587330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003045510.1;locus_tag=LDO09_RS10690;product=cobalamin biosynthesis protein CbiX;protein_id=WP_143587330.1;transl_table=11 NZ_AP024927.1 RefSeq gene 11744 12823 . - . ID=gene-LDO09_RS10695;Name=LDO09_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10695;old_locus_tag=TthAA11_21040 NZ_AP024927.1 Protein Homology CDS 11744 12823 . - 0 ID=cds-WP_143587332.1;Parent=gene-LDO09_RS10695;Dbxref=Genbank:WP_143587332.1;Name=WP_143587332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003045512.1;locus_tag=LDO09_RS10695;product=cobalt-precorrin 5A hydrolase;protein_id=WP_143587332.1;transl_table=11 NZ_AP024927.1 RefSeq gene 12816 13679 . - . ID=gene-LDO09_RS10700;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=LDO09_RS10700;old_locus_tag=TthAA11_21050 NZ_AP024927.1 Protein Homology CDS 12816 13679 . - 0 ID=cds-WP_143587334.1;Parent=gene-LDO09_RS10700;Dbxref=Genbank:WP_143587334.1;Name=WP_143587334.1;Ontology_term=GO:0009236,GO:0030789;gbkey=CDS;gene=cobJ;go_function=precorrin-3B C17-methyltransferase activity|0030789||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630531.1;locus_tag=LDO09_RS10700;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_143587334.1;transl_table=11 NZ_AP024927.1 RefSeq gene 13684 14427 . - . ID=gene-LDO09_RS10705;Name=LDO09_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10705;old_locus_tag=TthAA11_21060 NZ_AP024927.1 Protein Homology CDS 13684 14427 . - 0 ID=cds-WP_143587337.1;Parent=gene-LDO09_RS10705;Dbxref=Genbank:WP_143587337.1;Name=WP_143587337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630530.1;locus_tag=LDO09_RS10705;product=cobalt-precorrin-4/precorrin-4 C(11)-methyltransferase;protein_id=WP_143587337.1;transl_table=11 NZ_AP024927.1 RefSeq gene 14424 15095 . - . ID=gene-LDO09_RS10710;Name=LDO09_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10710;old_locus_tag=TthAA11_21070 NZ_AP024927.1 Protein Homology CDS 14424 15095 . - 0 ID=cds-WP_143587339.1;Parent=gene-LDO09_RS10710;Dbxref=Genbank:WP_143587339.1;Name=WP_143587339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229230.1;locus_tag=LDO09_RS10710;product=precorrin-2 C(20)-methyltransferase;protein_id=WP_143587339.1;transl_table=11 NZ_AP024927.1 RefSeq gene 15092 16303 . - . ID=gene-LDO09_RS10715;Name=cbiE;gbkey=Gene;gene=cbiE;gene_biotype=protein_coding;locus_tag=LDO09_RS10715;old_locus_tag=TthAA11_21080 NZ_AP024927.1 Protein Homology CDS 15092 16303 . - 0 ID=cds-WP_143587341.1;Parent=gene-LDO09_RS10715;Dbxref=Genbank:WP_143587341.1;Name=WP_143587341.1;Ontology_term=GO:0046140,GO:0046025;gbkey=CDS;gene=cbiE;go_function=precorrin-6Y C5%2C15-methyltransferase (decarboxylating) activity|0046025||IEA;go_process=corrin biosynthetic process|0046140||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631406.1;locus_tag=LDO09_RS10715;product=precorrin-6y C5%2C15-methyltransferase (decarboxylating) subunit CbiE;protein_id=WP_143587341.1;transl_table=11 NZ_AP024927.1 RefSeq gene 16304 17002 . - . ID=gene-LDO09_RS10720;Name=LDO09_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10720;old_locus_tag=TthAA11_21090 NZ_AP024927.1 Protein Homology CDS 16304 17002 . - 0 ID=cds-WP_223969305.1;Parent=gene-LDO09_RS10720;Dbxref=Genbank:WP_223969305.1;Name=WP_223969305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630527.1;locus_tag=LDO09_RS10720;product=precorrin-8X methylmutase;protein_id=WP_223969305.1;transl_table=11 NZ_AP024927.1 RefSeq gene 16995 18095 . - . ID=gene-LDO09_RS10725;Name=LDO09_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10725;old_locus_tag=TthAA11_21100 NZ_AP024927.1 Protein Homology CDS 16995 18095 . - 0 ID=cds-WP_223969307.1;Parent=gene-LDO09_RS10725;Dbxref=Genbank:WP_223969307.1;Name=WP_223969307.1;Ontology_term=GO:0009236,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631402.1;locus_tag=LDO09_RS10725;product=cobalt-precorrin-5B (C(1))-methyltransferase;protein_id=WP_223969307.1;transl_table=11 NZ_AP024927.1 RefSeq gene 18092 18754 . - . ID=gene-LDO09_RS10730;Name=LDO09_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10730;old_locus_tag=TthAA11_21110 NZ_AP024927.1 Protein Homology CDS 18092 18754 . - 0 ID=cds-WP_143587345.1;Parent=gene-LDO09_RS10730;Dbxref=Genbank:WP_143587345.1;Name=WP_143587345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630526.1;locus_tag=LDO09_RS10730;product=nickel permease;protein_id=WP_143587345.1;transl_table=11 NZ_AP024927.1 cmsearch riboswitch 18850 19015 . - . ID=id-NZ_AP024927.1:18850..19015;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_AP024927.1 RefSeq gene 19019 19552 . - . ID=gene-LDO09_RS10735;Name=LDO09_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10735;old_locus_tag=TthAA11_21120 NZ_AP024927.1 Protein Homology CDS 19019 19552 . - 0 ID=cds-WP_143587348.1;Parent=gene-LDO09_RS10735;Dbxref=Genbank:WP_143587348.1;Name=WP_143587348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631398.1;locus_tag=LDO09_RS10735;product=histidine phosphatase family protein;protein_id=WP_143587348.1;transl_table=11 NZ_AP024927.1 RefSeq gene 19579 20586 . + . ID=gene-LDO09_RS10740;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=LDO09_RS10740;old_locus_tag=TthAA11_21130 NZ_AP024927.1 Protein Homology CDS 19579 20586 . + 0 ID=cds-WP_143587350.1;Parent=gene-LDO09_RS10740;Dbxref=Genbank:WP_143587350.1;Name=WP_143587350.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511292.1;locus_tag=LDO09_RS10740;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_143587350.1;transl_table=11 NZ_AP024927.1 RefSeq gene 20609 22417 . + . ID=gene-LDO09_RS10745;Name=LDO09_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10745;old_locus_tag=TthAA11_21140 NZ_AP024927.1 Protein Homology CDS 20609 22417 . + 0 ID=cds-WP_143587352.1;Parent=gene-LDO09_RS10745;Dbxref=Genbank:WP_143587352.1;Name=WP_143587352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630525.1;locus_tag=LDO09_RS10745;product=hypothetical protein;protein_id=WP_143587352.1;transl_table=11 NZ_AP024927.1 RefSeq gene 22418 23140 . + . ID=gene-LDO09_RS10750;Name=LDO09_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10750;old_locus_tag=TthAA11_21150 NZ_AP024927.1 Protein Homology CDS 22418 23140 . + 0 ID=cds-WP_143587354.1;Parent=gene-LDO09_RS10750;Dbxref=Genbank:WP_143587354.1;Name=WP_143587354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511294.1;locus_tag=LDO09_RS10750;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_143587354.1;transl_table=11 NZ_AP024927.1 RefSeq gene 23145 23681 . + . ID=gene-LDO09_RS10755;Name=LDO09_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10755;old_locus_tag=TthAA11_21160 NZ_AP024927.1 Protein Homology CDS 23145 23681 . + 0 ID=cds-WP_143587356.1;Parent=gene-LDO09_RS10755;Dbxref=Genbank:WP_143587356.1;Name=WP_143587356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174549.1;locus_tag=LDO09_RS10755;product=hypothetical protein;protein_id=WP_143587356.1;transl_table=11 NZ_AP024927.1 RefSeq gene 23713 24276 . + . ID=gene-LDO09_RS10760;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=LDO09_RS10760;old_locus_tag=TthAA11_21170 NZ_AP024927.1 Protein Homology CDS 23713 24276 . + 0 ID=cds-WP_008631380.1;Parent=gene-LDO09_RS10760;Dbxref=Genbank:WP_008631380.1;Name=WP_008631380.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631380.1;locus_tag=LDO09_RS10760;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_008631380.1;transl_table=11 NZ_AP024927.1 RefSeq gene 24276 25607 . + . ID=gene-LDO09_RS10765;Name=LDO09_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10765;old_locus_tag=TthAA11_21180 NZ_AP024927.1 Protein Homology CDS 24276 25607 . + 0 ID=cds-WP_223969308.1;Parent=gene-LDO09_RS10765;Dbxref=Genbank:WP_223969308.1;Name=WP_223969308.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630522.1;locus_tag=LDO09_RS10765;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_223969308.1;transl_table=11 NZ_AP024927.1 RefSeq gene 26152 28896 . - . ID=gene-LDO09_RS10770;Name=LDO09_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10770;old_locus_tag=TthAA11_21190 NZ_AP024927.1 GeneMarkS-2+ CDS 26152 28896 . - 0 ID=cds-WP_223969311.1;Parent=gene-LDO09_RS10770;Dbxref=Genbank:WP_223969311.1;Name=WP_223969311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS10770;product=hypothetical protein;protein_id=WP_223969311.1;transl_table=11 NZ_AP024927.1 RefSeq gene 29044 31659 . + . ID=gene-LDO09_RS10775;Name=LDO09_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10775;old_locus_tag=TthAA11_21200 NZ_AP024927.1 Protein Homology CDS 29044 31659 . + 0 ID=cds-WP_223969314.1;Parent=gene-LDO09_RS10775;Dbxref=Genbank:WP_223969314.1;Name=WP_223969314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630517.1;locus_tag=LDO09_RS10775;product=BTAD domain-containing putative transcriptional regulator;protein_id=WP_223969314.1;transl_table=11 NZ_AP024927.1 RefSeq gene 31723 31902 . - . ID=gene-LDO09_RS10780;Name=LDO09_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10780;old_locus_tag=TthAA11_21210 NZ_AP024927.1 GeneMarkS-2+ CDS 31723 31902 . - 0 ID=cds-WP_223969318.1;Parent=gene-LDO09_RS10780;Dbxref=Genbank:WP_223969318.1;Name=WP_223969318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS10780;product=hypothetical protein;protein_id=WP_223969318.1;transl_table=11 NZ_AP024927.1 RefSeq gene 32035 33648 . + . ID=gene-LDO09_RS10785;Name=LDO09_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10785;old_locus_tag=TthAA11_21220 NZ_AP024927.1 Protein Homology CDS 32035 33648 . + 0 ID=cds-WP_223969321.1;Parent=gene-LDO09_RS10785;Dbxref=Genbank:WP_223969321.1;Name=WP_223969321.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172891.1;locus_tag=LDO09_RS10785;product=IS200/IS605 family accessory protein TnpB-related protein;protein_id=WP_223969321.1;transl_table=11 NZ_AP024927.1 RefSeq gene 33694 34074 . - . ID=gene-LDO09_RS10790;Name=LDO09_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10790;old_locus_tag=TthAA11_21230 NZ_AP024927.1 Protein Homology CDS 33694 34074 . - 0 ID=cds-WP_223969324.1;Parent=gene-LDO09_RS10790;Dbxref=Genbank:WP_223969324.1;Name=WP_223969324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630513.1;locus_tag=LDO09_RS10790;product=HEPN domain-containing protein;protein_id=WP_223969324.1;transl_table=11 NZ_AP024927.1 RefSeq pseudogene 34386 35024 . + . ID=gene-LDO09_RS10795;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=pseudogene;locus_tag=LDO09_RS10795;old_locus_tag=TthAA11_21240;partial=true;pseudo=true;start_range=.,34386 NZ_AP024927.1 Protein Homology CDS 34386 35024 . + 0 ID=cds-LDO09_RS10795;Parent=gene-LDO09_RS10795;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0043571,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=endodeoxyribonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511144.1;locus_tag=LDO09_RS10795;partial=true;product=CRISPR-associated endonuclease Cas1;pseudo=true;start_range=.,34386;transl_table=11 NZ_AP024927.1 RefSeq gene 35484 36344 . + . ID=gene-LDO09_RS10800;Name=LDO09_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10800;old_locus_tag=TthAA11_21250 NZ_AP024927.1 Protein Homology CDS 35484 36344 . + 0 ID=cds-WP_223969326.1;Parent=gene-LDO09_RS10800;Dbxref=Genbank:WP_223969326.1;Name=WP_223969326.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012632.2;locus_tag=LDO09_RS10800;product=hypothetical protein;protein_id=WP_223969326.1;transl_table=11 NZ_AP024927.1 RefSeq pseudogene 36351 37596 . + . ID=gene-LDO09_RS10805;Name=LDO09_RS10805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS10805;old_locus_tag=TthAA11_21260;pseudo=true NZ_AP024927.1 Protein Homology CDS 36351 37596 . + 0 ID=cds-LDO09_RS10805;Parent=gene-LDO09_RS10805;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1;locus_tag=LDO09_RS10805;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_AP024927.1 RefSeq gene 37762 37971 . + . ID=gene-LDO09_RS10810;Name=LDO09_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10810;old_locus_tag=TthAA11_21270 NZ_AP024927.1 Protein Homology CDS 37762 37971 . + 0 ID=cds-WP_223969328.1;Parent=gene-LDO09_RS10810;Dbxref=Genbank:WP_223969328.1;Name=WP_223969328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229249.1;locus_tag=LDO09_RS10810;product=hypothetical protein;protein_id=WP_223969328.1;transl_table=11 NZ_AP024927.1 RefSeq gene 37993 38775 . - . ID=gene-LDO09_RS10815;Name=LDO09_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10815;old_locus_tag=TthAA11_21280 NZ_AP024927.1 Protein Homology CDS 37993 38775 . - 0 ID=cds-WP_223969330.1;Parent=gene-LDO09_RS10815;Dbxref=Genbank:WP_223969330.1;Name=WP_223969330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229250.1;locus_tag=LDO09_RS10815;product=hypothetical protein;protein_id=WP_223969330.1;transl_table=11 NZ_AP024927.1 RefSeq gene 38798 39577 . - . ID=gene-LDO09_RS10820;Name=LDO09_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10820;old_locus_tag=TthAA11_21290 NZ_AP024927.1 Protein Homology CDS 38798 39577 . - 0 ID=cds-WP_223966632.1;Parent=gene-LDO09_RS10820;Dbxref=Genbank:WP_223966632.1;Name=WP_223966632.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511377.1;locus_tag=LDO09_RS10820;product=IS982 family transposase;protein_id=WP_223966632.1;transl_table=11 NZ_AP024927.1 RefSeq gene 40020 41195 . - . ID=gene-LDO09_RS10825;Name=LDO09_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10825;old_locus_tag=TthAA11_21310 NZ_AP024927.1 Protein Homology CDS 40020 41195 . - 0 ID=cds-WP_223969332.1;Parent=gene-LDO09_RS10825;Dbxref=Genbank:WP_223969332.1;Name=WP_223969332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013702893.1;locus_tag=LDO09_RS10825;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_223969332.1;transl_table=11 NZ_AP024927.1 RefSeq gene 41267 42300 . - . ID=gene-LDO09_RS10830;Name=LDO09_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10830 NZ_AP024927.1 Protein Homology CDS 41811 42300 . - 0 ID=cds-WP_143584174.1;Parent=gene-LDO09_RS10830;Dbxref=Genbank:WP_143584174.1;Name=WP_143584174.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611120.1;locus_tag=LDO09_RS10830;product=IS630-like element ISTth6 family transposase;protein_id=WP_143584174.1;transl_table=11 NZ_AP024927.1 Protein Homology CDS 41267 41811 . - 2 ID=cds-WP_143584174.1;Parent=gene-LDO09_RS10830;Dbxref=Genbank:WP_143584174.1;Name=WP_143584174.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611120.1;locus_tag=LDO09_RS10830;product=IS630-like element ISTth6 family transposase;protein_id=WP_143584174.1;transl_table=11 NZ_AP024927.1 RefSeq gene 42434 42817 . + . ID=gene-LDO09_RS10835;Name=LDO09_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10835;old_locus_tag=TthAA11_21340 NZ_AP024927.1 GeneMarkS-2+ CDS 42434 42817 . + 0 ID=cds-WP_223969334.1;Parent=gene-LDO09_RS10835;Dbxref=Genbank:WP_223969334.1;Name=WP_223969334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS10835;product=hypothetical protein;protein_id=WP_223969334.1;transl_table=11 NZ_AP024927.1 RefSeq gene 43160 43525 . + . ID=gene-LDO09_RS10840;Name=LDO09_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10840;old_locus_tag=TthAA11_21350 NZ_AP024927.1 Protein Homology CDS 43160 43525 . + 0 ID=cds-WP_223969336.1;Parent=gene-LDO09_RS10840;Dbxref=Genbank:WP_223969336.1;Name=WP_223969336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020388733.1;locus_tag=LDO09_RS10840;product=DoxX family membrane protein;protein_id=WP_223969336.1;transl_table=11 NZ_AP024927.1 RefSeq gene 43874 44907 . - . ID=gene-LDO09_RS10845;Name=LDO09_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10845 NZ_AP024927.1 Protein Homology CDS 44418 44907 . - 0 ID=cds-WP_143584174.1-2;Parent=gene-LDO09_RS10845;Dbxref=Genbank:WP_143584174.1;Name=WP_143584174.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611120.1;locus_tag=LDO09_RS10845;product=IS630-like element ISTth6 family transposase;protein_id=WP_143584174.1;transl_table=11 NZ_AP024927.1 Protein Homology CDS 43874 44418 . - 2 ID=cds-WP_143584174.1-2;Parent=gene-LDO09_RS10845;Dbxref=Genbank:WP_143584174.1;Name=WP_143584174.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611120.1;locus_tag=LDO09_RS10845;product=IS630-like element ISTth6 family transposase;protein_id=WP_143584174.1;transl_table=11 NZ_AP024927.1 RefSeq gene 44966 45807 . - . ID=gene-LDO09_RS10850;Name=LDO09_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10850 NZ_AP024927.1 Protein Homology CDS 45444 45807 . - 0 ID=cds-WP_223969338.1;Parent=gene-LDO09_RS10850;Dbxref=Genbank:WP_223969338.1;Name=WP_223969338.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012976163.1;locus_tag=LDO09_RS10850;product=IS5 family transposase;protein_id=WP_223969338.1;transl_table=11 NZ_AP024927.1 Protein Homology CDS 44966 45444 . - 2 ID=cds-WP_223969338.1;Parent=gene-LDO09_RS10850;Dbxref=Genbank:WP_223969338.1;Name=WP_223969338.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012976163.1;locus_tag=LDO09_RS10850;product=IS5 family transposase;protein_id=WP_223969338.1;transl_table=11 NZ_AP024927.1 RefSeq gene 46062 46334 . + . ID=gene-LDO09_RS10855;Name=LDO09_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10855;old_locus_tag=TthAA11_21420 NZ_AP024927.1 Protein Homology CDS 46062 46334 . + 0 ID=cds-WP_223969340.1;Parent=gene-LDO09_RS10855;Dbxref=Genbank:WP_223969340.1;Name=WP_223969340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632294.1;locus_tag=LDO09_RS10855;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_223969340.1;transl_table=11 NZ_AP024927.1 RefSeq gene 46331 46873 . + . ID=gene-LDO09_RS10860;Name=LDO09_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10860;old_locus_tag=TthAA11_21430 NZ_AP024927.1 Protein Homology CDS 46331 46873 . + 0 ID=cds-WP_223969343.1;Parent=gene-LDO09_RS10860;Dbxref=Genbank:WP_223969343.1;Name=WP_223969343.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013970.2;locus_tag=LDO09_RS10860;product=DUF1932 domain-containing protein;protein_id=WP_223969343.1;transl_table=11 NZ_AP024927.1 RefSeq gene 46870 48696 . - . ID=gene-LDO09_RS10865;Name=LDO09_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10865;old_locus_tag=TthAA11_21440 NZ_AP024927.1 Protein Homology CDS 46870 48696 . - 0 ID=cds-WP_223969345.1;Parent=gene-LDO09_RS10865;Dbxref=Genbank:WP_223969345.1;Name=WP_223969345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632293.1;locus_tag=LDO09_RS10865;product=sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein;protein_id=WP_223969345.1;transl_table=11 NZ_AP024927.1 RefSeq gene 48700 49671 . - . ID=gene-LDO09_RS10870;Name=LDO09_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10870;old_locus_tag=TthAA11_21450 NZ_AP024927.1 Protein Homology CDS 48700 49671 . - 0 ID=cds-WP_223969347.1;Parent=gene-LDO09_RS10870;Dbxref=Genbank:WP_223969347.1;Name=WP_223969347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632292.1;locus_tag=LDO09_RS10870;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_223969347.1;transl_table=11 NZ_AP024927.1 RefSeq gene 49668 51152 . - . ID=gene-LDO09_RS10875;Name=LDO09_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10875;old_locus_tag=TthAA11_21460 NZ_AP024927.1 Protein Homology CDS 49668 51152 . - 0 ID=cds-WP_223969349.1;Parent=gene-LDO09_RS10875;Dbxref=Genbank:WP_223969349.1;Name=WP_223969349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632291.1;locus_tag=LDO09_RS10875;product=tripartite tricarboxylate transporter permease;protein_id=WP_223969349.1;transl_table=11 NZ_AP024927.1 RefSeq gene 51149 51559 . - . ID=gene-LDO09_RS10880;Name=LDO09_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10880;old_locus_tag=TthAA11_21470 NZ_AP024927.1 Protein Homology CDS 51149 51559 . - 0 ID=cds-WP_223969351.1;Parent=gene-LDO09_RS10880;Dbxref=Genbank:WP_223969351.1;Name=WP_223969351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632290.1;locus_tag=LDO09_RS10880;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_223969351.1;transl_table=11 NZ_AP024927.1 RefSeq gene 51563 52534 . - . ID=gene-LDO09_RS10885;Name=LDO09_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10885;old_locus_tag=TthAA11_21480 NZ_AP024927.1 Protein Homology CDS 51563 52534 . - 0 ID=cds-WP_223969354.1;Parent=gene-LDO09_RS10885;Dbxref=Genbank:WP_223969354.1;Name=WP_223969354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015065200.1;locus_tag=LDO09_RS10885;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_223969354.1;transl_table=11 NZ_AP024927.1 RefSeq pseudogene 52823 52918 . - . ID=gene-LDO09_RS10890;Name=LDO09_RS10890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS10890;partial=true;pseudo=true;start_range=.,52823 NZ_AP024927.1 Protein Homology CDS 52823 52918 . - 0 ID=cds-LDO09_RS10890;Parent=gene-LDO09_RS10890;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612205.1;locus_tag=LDO09_RS10890;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,52823;transl_table=11 NZ_AP024927.1 RefSeq gene 52952 54145 . - . ID=gene-LDO09_RS10895;Name=LDO09_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10895;old_locus_tag=TthAA11_21490 NZ_AP024927.1 Protein Homology CDS 52952 54145 . - 0 ID=cds-WP_223969355.1;Parent=gene-LDO09_RS10895;Dbxref=Genbank:WP_223969355.1;Name=WP_223969355.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013014929.1;locus_tag=LDO09_RS10895;product=4-hydroxybenzoate 3-monooxygenase;protein_id=WP_223969355.1;transl_table=11 NZ_AP024927.1 RefSeq gene 54157 55458 . - . ID=gene-LDO09_RS10900;Name=LDO09_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10900;old_locus_tag=TthAA11_21500 NZ_AP024927.1 Protein Homology CDS 54157 55458 . - 0 ID=cds-WP_223969357.1;Parent=gene-LDO09_RS10900;Dbxref=Genbank:WP_223969357.1;Name=WP_223969357.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018513.2;locus_tag=LDO09_RS10900;product=TRAP transporter large permease;protein_id=WP_223969357.1;transl_table=11 NZ_AP024927.1 RefSeq gene 55455 55940 . - . ID=gene-LDO09_RS10905;Name=LDO09_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10905;old_locus_tag=TthAA11_21510 NZ_AP024927.1 Protein Homology CDS 55455 55940 . - 0 ID=cds-WP_223969359.1;Parent=gene-LDO09_RS10905;Dbxref=Genbank:WP_223969359.1;Name=WP_223969359.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016200.2;locus_tag=LDO09_RS10905;product=TRAP transporter small permease subunit;protein_id=WP_223969359.1;transl_table=11 NZ_AP024927.1 RefSeq gene 56005 57117 . - . ID=gene-LDO09_RS10910;Name=LDO09_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10910;old_locus_tag=TthAA11_21520 NZ_AP024927.1 Protein Homology CDS 56005 57117 . - 0 ID=cds-WP_223969361.1;Parent=gene-LDO09_RS10910;Dbxref=Genbank:WP_223969361.1;Name=WP_223969361.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015445.2;locus_tag=LDO09_RS10910;product=TRAP transporter substrate-binding protein;protein_id=WP_223969361.1;transl_table=11 NZ_AP024927.1 RefSeq gene 57249 58223 . - . ID=gene-LDO09_RS10915;Name=LDO09_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10915;old_locus_tag=TthAA11_21530 NZ_AP024927.1 Protein Homology CDS 57249 58223 . - 0 ID=cds-WP_223969363.1;Parent=gene-LDO09_RS10915;Dbxref=Genbank:WP_223969363.1;Name=WP_223969363.1;Ontology_term=GO:0009712,GO:0018577;gbkey=CDS;go_function=catechol 2%2C3-dioxygenase activity|0018577||IEA;go_process=catechol-containing compound metabolic process|0009712||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717050.1;locus_tag=LDO09_RS10915;product=catechol 2%2C3-dioxygenase;protein_id=WP_223969363.1;transl_table=11 NZ_AP024927.1 RefSeq gene 58224 58631 . - . ID=gene-LDO09_RS10920;Name=LDO09_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10920;old_locus_tag=TthAA11_21540 NZ_AP024927.1 Protein Homology CDS 58224 58631 . - 0 ID=cds-WP_143587201.1;Parent=gene-LDO09_RS10920;Dbxref=Genbank:WP_143587201.1;Name=WP_143587201.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015065198.1;locus_tag=LDO09_RS10920;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_143587201.1;transl_table=11 NZ_AP024927.1 RefSeq gene 58806 59576 . + . ID=gene-LDO09_RS10925;Name=LDO09_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10925;old_locus_tag=TthAA11_21550 NZ_AP024927.1 Protein Homology CDS 58806 59576 . + 0 ID=cds-WP_143587199.1;Parent=gene-LDO09_RS10925;Dbxref=Genbank:WP_143587199.1;Name=WP_143587199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111975.1;locus_tag=LDO09_RS10925;product=IclR family transcriptional regulator;protein_id=WP_143587199.1;transl_table=11 NZ_AP024927.1 RefSeq gene 59558 60478 . + . ID=gene-LDO09_RS10930;Name=LDO09_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10930;old_locus_tag=TthAA11_21560 NZ_AP024927.1 Protein Homology CDS 59558 60478 . + 0 ID=cds-WP_223967033.1;Parent=gene-LDO09_RS10930;Dbxref=Genbank:WP_223967033.1;Name=WP_223967033.1;Ontology_term=GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015065445.1;locus_tag=LDO09_RS10930;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_223967033.1;transl_table=11 NZ_AP024927.1 RefSeq gene 60475 61518 . + . ID=gene-LDO09_RS10935;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=LDO09_RS10935;old_locus_tag=TthAA11_21570 NZ_AP024927.1 Protein Homology CDS 60475 61518 . + 0 ID=cds-WP_223967035.1;Parent=gene-LDO09_RS10935;Dbxref=Genbank:WP_223967035.1;Name=WP_223967035.1;Ontology_term=GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461893.1;locus_tag=LDO09_RS10935;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_223967035.1;transl_table=11 NZ_AP024927.1 RefSeq gene 61528 62385 . + . ID=gene-LDO09_RS10940;Name=LDO09_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10940;old_locus_tag=TthAA11_21580 NZ_AP024927.1 Protein Homology CDS 61528 62385 . + 0 ID=cds-WP_223969365.1;Parent=gene-LDO09_RS10940;Dbxref=Genbank:WP_223969365.1;Name=WP_223969365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632275.1;locus_tag=LDO09_RS10940;product=NAD(P)-dependent oxidoreductase;protein_id=WP_223969365.1;transl_table=11 NZ_AP024927.1 RefSeq gene 62388 62813 . + . ID=gene-LDO09_RS10945;Name=LDO09_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10945;old_locus_tag=TthAA11_21590 NZ_AP024927.1 Protein Homology CDS 62388 62813 . + 0 ID=cds-WP_143587191.1;Parent=gene-LDO09_RS10945;Dbxref=Genbank:WP_143587191.1;Name=WP_143587191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632274.1;locus_tag=LDO09_RS10945;product=DMT family transporter;protein_id=WP_143587191.1;transl_table=11 NZ_AP024927.1 RefSeq gene 62814 63008 . + . ID=gene-LDO09_RS10950;Name=LDO09_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10950;old_locus_tag=TthAA11_21600 NZ_AP024927.1 Protein Homology CDS 62814 63008 . + 0 ID=cds-WP_014632273.1;Parent=gene-LDO09_RS10950;Dbxref=Genbank:WP_014632273.1;Name=WP_014632273.1;Ontology_term=GO:0006725,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717055.1;locus_tag=LDO09_RS10950;product=tautomerase family protein;protein_id=WP_014632273.1;transl_table=11 NZ_AP024927.1 RefSeq gene 63005 63700 . + . ID=gene-LDO09_RS10955;Name=LDO09_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10955;old_locus_tag=TthAA11_21610 NZ_AP024927.1 Protein Homology CDS 63005 63700 . + 0 ID=cds-WP_223967048.1;Parent=gene-LDO09_RS10955;Dbxref=Genbank:WP_223967048.1;Name=WP_223967048.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632272.1;locus_tag=LDO09_RS10955;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_223967048.1;transl_table=11 NZ_AP024927.1 RefSeq gene 63711 65219 . + . ID=gene-LDO09_RS10960;Name=LDO09_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10960;old_locus_tag=TthAA11_21620 NZ_AP024927.1 Protein Homology CDS 63711 65219 . + 0 ID=cds-WP_143587187.1;Parent=gene-LDO09_RS10960;Dbxref=Genbank:WP_143587187.1;Name=WP_143587187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717057.1;locus_tag=LDO09_RS10960;product=aldehyde dehydrogenase;protein_id=WP_143587187.1;transl_table=11 NZ_AP024927.1 RefSeq gene 65229 65759 . + . ID=gene-LDO09_RS10965;Name=LDO09_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10965;old_locus_tag=TthAA11_21630 NZ_AP024927.1 Protein Homology CDS 65229 65759 . + 0 ID=cds-WP_223969367.1;Parent=gene-LDO09_RS10965;Dbxref=Genbank:WP_223969367.1;Name=WP_223969367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110350.1;locus_tag=LDO09_RS10965;product=Uma2 family endonuclease;protein_id=WP_223969367.1;transl_table=11 NZ_AP024927.1 RefSeq gene 65756 66532 . + . ID=gene-LDO09_RS10970;Name=LDO09_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10970;old_locus_tag=TthAA11_21640 NZ_AP024927.1 Protein Homology CDS 65756 66532 . + 0 ID=cds-WP_223969369.1;Parent=gene-LDO09_RS10970;Dbxref=Genbank:WP_223969369.1;Name=WP_223969369.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014515701.1;locus_tag=LDO09_RS10970;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_223969369.1;transl_table=11 NZ_AP024927.1 RefSeq gene 66543 66722 . + . ID=gene-LDO09_RS10975;Name=LDO09_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10975;old_locus_tag=TthAA11_21650 NZ_AP024927.1 Protein Homology CDS 66543 66722 . + 0 ID=cds-WP_223967052.1;Parent=gene-LDO09_RS10975;Dbxref=Genbank:WP_223967052.1;Name=WP_223967052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018111982.1;locus_tag=LDO09_RS10975;product=hypothetical protein;protein_id=WP_223967052.1;transl_table=11 NZ_AP024927.1 RefSeq gene 66761 67600 . + . ID=gene-LDO09_RS10980;Name=LDO09_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10980;old_locus_tag=TthAA11_21660 NZ_AP024927.1 Protein Homology CDS 66761 67600 . + 0 ID=cds-WP_172619243.1;Parent=gene-LDO09_RS10980;Dbxref=Genbank:WP_172619243.1;Name=WP_172619243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632269.1;locus_tag=LDO09_RS10980;product=alpha/beta hydrolase;protein_id=WP_172619243.1;transl_table=11 NZ_AP024927.1 RefSeq gene 67597 67749 . + . ID=gene-LDO09_RS10985;Name=LDO09_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10985;old_locus_tag=TthAA11_21670 NZ_AP024927.1 GeneMarkS-2+ CDS 67597 67749 . + 0 ID=cds-WP_172619242.1;Parent=gene-LDO09_RS10985;Dbxref=Genbank:WP_172619242.1;Name=WP_172619242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS10985;product=hypothetical protein;protein_id=WP_172619242.1;transl_table=11 NZ_AP024927.1 RefSeq gene 67855 68817 . - . ID=gene-LDO09_RS10990;Name=LDO09_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10990;old_locus_tag=TthAA11_21680 NZ_AP024927.1 Protein Homology CDS 67855 68817 . - 0 ID=cds-WP_223969371.1;Parent=gene-LDO09_RS10990;Dbxref=Genbank:WP_223969371.1;Name=WP_223969371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229073.1;locus_tag=LDO09_RS10990;product=recombinase XerD;protein_id=WP_223969371.1;transl_table=11 NZ_AP024927.1 RefSeq gene 69065 69280 . + . ID=gene-LDO09_RS10995;Name=LDO09_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10995;old_locus_tag=TthAA11_21690 NZ_AP024927.1 Protein Homology CDS 69065 69280 . + 0 ID=cds-WP_041443964.1;Parent=gene-LDO09_RS10995;Dbxref=Genbank:WP_041443964.1;Name=WP_041443964.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631365.1;locus_tag=LDO09_RS10995;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_041443964.1;transl_table=11 NZ_AP024927.1 RefSeq gene 69277 69690 . + . ID=gene-LDO09_RS11000;Name=LDO09_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11000;old_locus_tag=TthAA11_21700 NZ_AP024927.1 Protein Homology CDS 69277 69690 . + 0 ID=cds-WP_011174362.1;Parent=gene-LDO09_RS11000;Dbxref=Genbank:WP_011174362.1;Name=WP_011174362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174362.1;locus_tag=LDO09_RS11000;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_011174362.1;transl_table=11 NZ_AP024927.1 RefSeq gene 70060 71021 . + . ID=gene-LDO09_RS11005;Name=LDO09_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11005 NZ_AP024927.1 Protein Homology CDS 70060 70552 . + 0 ID=cds-WP_223967055.1;Parent=gene-LDO09_RS11005;Dbxref=Genbank:WP_223967055.1;Name=WP_223967055.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611120.1;locus_tag=LDO09_RS11005;product=IS630 family transposase;protein_id=WP_223967055.1;transl_table=11 NZ_AP024927.1 Protein Homology CDS 70552 71021 . + 2 ID=cds-WP_223967055.1;Parent=gene-LDO09_RS11005;Dbxref=Genbank:WP_223967055.1;Name=WP_223967055.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611120.1;locus_tag=LDO09_RS11005;product=IS630 family transposase;protein_id=WP_223967055.1;transl_table=11 NZ_AP024927.1 RefSeq gene 71094 71678 . - . ID=gene-LDO09_RS11010;Name=LDO09_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11010;old_locus_tag=TthAA11_21730 NZ_AP024927.1 GeneMarkS-2+ CDS 71094 71678 . - 0 ID=cds-WP_143587177.1;Parent=gene-LDO09_RS11010;Dbxref=Genbank:WP_143587177.1;Name=WP_143587177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11010;product=hypothetical protein;protein_id=WP_143587177.1;transl_table=11 NZ_AP024927.1 RefSeq gene 71662 72876 . - . ID=gene-LDO09_RS11015;Name=LDO09_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11015;old_locus_tag=TthAA11_21740 NZ_AP024927.1 Protein Homology CDS 71662 72876 . - 0 ID=cds-WP_223969373.1;Parent=gene-LDO09_RS11015;Dbxref=Genbank:WP_223969373.1;Name=WP_223969373.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=LDO09_RS11015;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_223969373.1;transl_table=11 NZ_AP024927.1 RefSeq gene 72873 73529 . - . ID=gene-LDO09_RS11020;Name=LDO09_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11020;old_locus_tag=TthAA11_21750 NZ_AP024927.1 Protein Homology CDS 72873 73529 . - 0 ID=cds-WP_143587173.1;Parent=gene-LDO09_RS11020;Dbxref=Genbank:WP_143587173.1;Name=WP_143587173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716989.1;locus_tag=LDO09_RS11020;product=response regulator transcription factor;protein_id=WP_143587173.1;transl_table=11 NZ_AP024927.1 RefSeq gene 73526 73948 . - . ID=gene-LDO09_RS11025;Name=LDO09_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11025;old_locus_tag=TthAA11_21760 NZ_AP024927.1 GeneMarkS-2+ CDS 73526 73948 . - 0 ID=cds-WP_143587171.1;Parent=gene-LDO09_RS11025;Dbxref=Genbank:WP_143587171.1;Name=WP_143587171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11025;product=hypothetical protein;protein_id=WP_143587171.1;transl_table=11 NZ_AP024927.1 RefSeq gene 73945 74739 . - . ID=gene-LDO09_RS11030;Name=LDO09_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11030;old_locus_tag=TthAA11_21770 NZ_AP024927.1 Protein Homology CDS 73945 74739 . - 0 ID=cds-WP_143587169.1;Parent=gene-LDO09_RS11030;Dbxref=Genbank:WP_143587169.1;Name=WP_143587169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015716990.1;locus_tag=LDO09_RS11030;product=cytochrome c3 family protein;protein_id=WP_143587169.1;transl_table=11 NZ_AP024927.1 RefSeq gene 74736 75257 . - . ID=gene-LDO09_RS11035;Name=LDO09_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11035;old_locus_tag=TthAA11_21780 NZ_AP024927.1 Protein Homology CDS 74736 75257 . - 0 ID=cds-WP_223969375.1;Parent=gene-LDO09_RS11035;Dbxref=Genbank:WP_223969375.1;Name=WP_223969375.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016176.2;locus_tag=LDO09_RS11035;product=YceI family protein;protein_id=WP_223969375.1;transl_table=11 NZ_AP024927.1 RefSeq gene 75360 76532 . - . ID=gene-LDO09_RS11040;Name=LDO09_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11040;old_locus_tag=TthAA11_21790 NZ_AP024927.1 Protein Homology CDS 75360 76532 . - 0 ID=cds-WP_143587165.1;Parent=gene-LDO09_RS11040;Dbxref=Genbank:WP_143587165.1;Name=WP_143587165.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039822.1;locus_tag=LDO09_RS11040;product=DUF5666 domain-containing protein;protein_id=WP_143587165.1;transl_table=11 NZ_AP024927.1 RefSeq gene 76651 76833 . + . ID=gene-LDO09_RS11045;Name=LDO09_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11045 NZ_AP024927.1 Protein Homology CDS 76651 76833 . + 0 ID=cds-WP_143587163.1;Parent=gene-LDO09_RS11045;Dbxref=Genbank:WP_143587163.1;Name=WP_143587163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511079.1;locus_tag=LDO09_RS11045;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_143587163.1;transl_table=11 NZ_AP024927.1 RefSeq pseudogene 76864 77835 . + . ID=gene-LDO09_RS11050;Name=LDO09_RS11050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS11050;pseudo=true NZ_AP024927.1 Protein Homology CDS 76864 77835 . + 0 ID=cds-LDO09_RS11050;Parent=gene-LDO09_RS11050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172890.1;locus_tag=LDO09_RS11050;product=IS701 family transposase;pseudo=true;transl_table=11 NZ_AP024927.1 RefSeq gene 77815 78897 . - . ID=gene-LDO09_RS11055;Name=LDO09_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11055;old_locus_tag=TthAA11_21830 NZ_AP024927.1 GeneMarkS-2+ CDS 77815 78897 . - 0 ID=cds-WP_223969378.1;Parent=gene-LDO09_RS11055;Dbxref=Genbank:WP_223969378.1;Name=WP_223969378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11055;product=hypothetical protein;protein_id=WP_223969378.1;transl_table=11 NZ_AP024927.1 RefSeq gene 80253 81032 . - . ID=gene-LDO09_RS11060;Name=LDO09_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11060;old_locus_tag=TthAA11_21850 NZ_AP024927.1 Protein Homology CDS 80253 81032 . - 0 ID=cds-WP_223969379.1;Parent=gene-LDO09_RS11060;Dbxref=Genbank:WP_223969379.1;Name=WP_223969379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.2;locus_tag=LDO09_RS11060;product=site-specific DNA-methyltransferase;protein_id=WP_223969379.1;transl_table=11 NZ_AP024927.1 RefSeq gene 82233 82391 . + . ID=gene-LDO09_RS11065;Name=LDO09_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11065;old_locus_tag=TthAA11_21860 NZ_AP024927.1 GeneMarkS-2+ CDS 82233 82391 . + 0 ID=cds-WP_223967063.1;Parent=gene-LDO09_RS11065;Dbxref=Genbank:WP_223967063.1;Name=WP_223967063.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11065;product=hypothetical protein;protein_id=WP_223967063.1;transl_table=11 NZ_AP024927.1 RefSeq gene 82443 82751 . - . ID=gene-LDO09_RS11070;Name=LDO09_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11070;old_locus_tag=TthAA11_21870 NZ_AP024927.1 Protein Homology CDS 82443 82751 . - 0 ID=cds-WP_126207020.1;Parent=gene-LDO09_RS11070;Dbxref=Genbank:WP_126207020.1;Name=WP_126207020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630482.1;locus_tag=LDO09_RS11070;product=CopG family antitoxin;protein_id=WP_126207020.1;transl_table=11 NZ_AP024927.1 RefSeq gene 82752 83024 . - . ID=gene-LDO09_RS11075;Name=LDO09_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11075;old_locus_tag=TthAA11_21880 NZ_AP024927.1 Protein Homology CDS 82752 83024 . - 0 ID=cds-WP_126207019.1;Parent=gene-LDO09_RS11075;Dbxref=Genbank:WP_126207019.1;Name=WP_126207019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229269.1;locus_tag=LDO09_RS11075;product=BrnT family toxin;protein_id=WP_126207019.1;transl_table=11 NZ_AP024927.1 RefSeq gene 83369 83608 . + . ID=gene-LDO09_RS11080;Name=LDO09_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11080;old_locus_tag=TthAA11_21890 NZ_AP024927.1 Protein Homology CDS 83369 83608 . + 0 ID=cds-WP_126207018.1;Parent=gene-LDO09_RS11080;Dbxref=Genbank:WP_126207018.1;Name=WP_126207018.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024934.2;locus_tag=LDO09_RS11080;product=helix-turn-helix domain-containing protein;protein_id=WP_126207018.1;transl_table=11 NZ_AP024927.1 RefSeq gene 83649 84308 . + . ID=gene-LDO09_RS11085;Name=LDO09_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11085;old_locus_tag=TthAA11_21900 NZ_AP024927.1 Protein Homology CDS 83649 84308 . + 0 ID=cds-WP_126207017.1;Parent=gene-LDO09_RS11085;Dbxref=Genbank:WP_126207017.1;Name=WP_126207017.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025015.2;locus_tag=LDO09_RS11085;product=SdpI family protein;protein_id=WP_126207017.1;transl_table=11 NZ_AP024927.1 RefSeq gene 84564 84785 . - . ID=gene-LDO09_RS11090;Name=LDO09_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11090;old_locus_tag=TthAA11_21910 NZ_AP024927.1 GeneMarkS-2+ CDS 84564 84785 . - 0 ID=cds-WP_216639790.1;Parent=gene-LDO09_RS11090;Dbxref=Genbank:WP_216639790.1;Name=WP_216639790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11090;product=hypothetical protein;protein_id=WP_216639790.1;transl_table=11 NZ_AP024927.1 RefSeq gene 84823 85467 . - . ID=gene-LDO09_RS12145;Name=LDO09_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12145;old_locus_tag=TthAA11_21920 NZ_AP024927.1 Protein Homology CDS 84823 85467 . - 0 ID=cds-WP_267461202.1;Parent=gene-LDO09_RS12145;Dbxref=Genbank:WP_267461202.1;Name=WP_267461202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014632320.1;locus_tag=LDO09_RS12145;product=LexA family transcriptional regulator;protein_id=WP_267461202.1;transl_table=11 NZ_AP024927.1 RefSeq gene 85656 85961 . + . ID=gene-LDO09_RS11105;Name=LDO09_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11105;old_locus_tag=TthAA11_21930 NZ_AP024927.1 Protein Homology CDS 85656 85961 . + 0 ID=cds-WP_014511052.1;Parent=gene-LDO09_RS11105;Dbxref=Genbank:WP_014511052.1;Name=WP_014511052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511052.1;locus_tag=LDO09_RS11105;product=DUF433 domain-containing protein;protein_id=WP_014511052.1;transl_table=11 NZ_AP024927.1 RefSeq gene 85958 86305 . + . ID=gene-LDO09_RS11110;Name=LDO09_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11110;old_locus_tag=TthAA11_21940 NZ_AP024927.1 Protein Homology CDS 85958 86305 . + 0 ID=cds-WP_014632318.1;Parent=gene-LDO09_RS11110;Dbxref=Genbank:WP_014632318.1;Name=WP_014632318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511053.1;locus_tag=LDO09_RS11110;product=DUF5615 family PIN-like protein;protein_id=WP_014632318.1;transl_table=11 NZ_AP024927.1 RefSeq gene 86308 86715 . + . ID=gene-LDO09_RS11115;Name=LDO09_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11115;old_locus_tag=TthAA11_21950 NZ_AP024927.1 Protein Homology CDS 86308 86715 . + 0 ID=cds-WP_223967072.1;Parent=gene-LDO09_RS11115;Dbxref=Genbank:WP_223967072.1;Name=WP_223967072.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025019.2;locus_tag=LDO09_RS11115;product=DUF4143 domain-containing protein;protein_id=WP_223967072.1;transl_table=11 NZ_AP024927.1 RefSeq gene 86693 86869 . + . ID=gene-LDO09_RS11120;Name=LDO09_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11120;old_locus_tag=TthAA11_21960 NZ_AP024927.1 GeneMarkS-2+ CDS 86693 86869 . + 0 ID=cds-WP_223967074.1;Parent=gene-LDO09_RS11120;Dbxref=Genbank:WP_223967074.1;Name=WP_223967074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11120;product=hypothetical protein;protein_id=WP_223967074.1;transl_table=11 NZ_AP024927.1 RefSeq gene 87046 87291 . + . ID=gene-LDO09_RS11125;Name=LDO09_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11125;old_locus_tag=TthAA11_21970 NZ_AP024927.1 Protein Homology CDS 87046 87291 . + 0 ID=cds-WP_223967076.1;Parent=gene-LDO09_RS11125;Dbxref=Genbank:WP_223967076.1;Name=WP_223967076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008630541.1;locus_tag=LDO09_RS11125;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_223967076.1;transl_table=11 NZ_AP024927.1 RefSeq gene 87350 87700 . + . ID=gene-LDO09_RS11130;Name=LDO09_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11130;old_locus_tag=TthAA11_21980 NZ_AP024927.1 Protein Homology CDS 87350 87700 . + 0 ID=cds-WP_267461203.1;Parent=gene-LDO09_RS11130;Dbxref=Genbank:WP_267461203.1;Name=WP_267461203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018465353.1;locus_tag=LDO09_RS11130;product=DNA-binding protein;protein_id=WP_267461203.1;transl_table=11 NZ_AP024927.1 RefSeq gene 87806 87925 . + . ID=gene-LDO09_RS11135;Name=LDO09_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11135 NZ_AP024927.1 Protein Homology CDS 87806 87925 . + 0 ID=cds-WP_223967080.1;Parent=gene-LDO09_RS11135;Dbxref=Genbank:WP_223967080.1;Name=WP_223967080.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024908.2;locus_tag=LDO09_RS11135;product=helix-turn-helix domain-containing protein;protein_id=WP_223967080.1;transl_table=11 NZ_AP024927.1 RefSeq gene 88388 88783 . + . ID=gene-LDO09_RS11145;Name=LDO09_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11145;old_locus_tag=TthAA11_22000 NZ_AP024927.1 Protein Homology CDS 88388 88783 . + 0 ID=cds-WP_223967083.1;Parent=gene-LDO09_RS11145;Dbxref=Genbank:WP_223967083.1;Name=WP_223967083.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024751.2;locus_tag=LDO09_RS11145;product=transposase;protein_id=WP_223967083.1;transl_table=11 NZ_AP024927.1 RefSeq gene 88939 90159 . + . ID=gene-LDO09_RS11150;Name=LDO09_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11150;old_locus_tag=TthAA11_22010 NZ_AP024927.1 Protein Homology CDS 88939 90159 . + 0 ID=cds-WP_143587230.1;Parent=gene-LDO09_RS11150;Dbxref=Genbank:WP_143587230.1;Name=WP_143587230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1;locus_tag=LDO09_RS11150;product=IS256-like element ISTth4 family transposase;protein_id=WP_143587230.1;transl_table=11 NZ_AP024927.1 RefSeq gene 90573 91751 . - . ID=gene-LDO09_RS11155;Name=LDO09_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11155;old_locus_tag=TthAA11_22020 NZ_AP024927.1 Protein Homology CDS 90573 91751 . - 0 ID=cds-WP_223967085.1;Parent=gene-LDO09_RS11155;Dbxref=Genbank:WP_223967085.1;Name=WP_223967085.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002622904.1;locus_tag=LDO09_RS11155;product=c-type cytochrome;protein_id=WP_223967085.1;transl_table=11 NZ_AP024927.1 RefSeq gene 91805 92851 . - . ID=gene-LDO09_RS11160;Name=LDO09_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11160;old_locus_tag=TthAA11_22040 NZ_AP024927.1 Protein Homology CDS 91805 92851 . - 0 ID=cds-WP_143587150.1;Parent=gene-LDO09_RS11160;Dbxref=Genbank:WP_143587150.1;Name=WP_143587150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174392.1;locus_tag=LDO09_RS11160;product=hypothetical protein;protein_id=WP_143587150.1;transl_table=11 NZ_AP024927.1 RefSeq gene 93035 93355 . - . ID=gene-LDO09_RS11165;Name=LDO09_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11165;old_locus_tag=TthAA11_22060 NZ_AP024927.1 Protein Homology CDS 93035 93355 . - 0 ID=cds-WP_143587146.1;Parent=gene-LDO09_RS11165;Dbxref=Genbank:WP_143587146.1;Name=WP_143587146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630458.1;locus_tag=LDO09_RS11165;product=antibiotic biosynthesis monooxygenase;protein_id=WP_143587146.1;transl_table=11 NZ_AP024927.1 RefSeq gene 93479 94720 . - . ID=gene-LDO09_RS11170;Name=LDO09_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11170;old_locus_tag=TthAA11_22070 NZ_AP024927.1 Protein Homology CDS 93479 94720 . - 0 ID=cds-WP_143587144.1;Parent=gene-LDO09_RS11170;Dbxref=Genbank:WP_143587144.1;Name=WP_143587144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110973.1;locus_tag=LDO09_RS11170;product=nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein;protein_id=WP_143587144.1;transl_table=11 NZ_AP024927.1 RefSeq gene 94730 96397 . - . ID=gene-LDO09_RS11175;Name=LDO09_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11175;old_locus_tag=TthAA11_22080 NZ_AP024927.1 Protein Homology CDS 94730 96397 . - 0 ID=cds-WP_143587142.1;Parent=gene-LDO09_RS11175;Dbxref=Genbank:WP_143587142.1;Name=WP_143587142.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110972.1;locus_tag=LDO09_RS11175;product=ABC transporter permease subunit;protein_id=WP_143587142.1;transl_table=11 NZ_AP024927.1 RefSeq gene 96699 97241 . - . ID=gene-LDO09_RS11180;Name=LDO09_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11180;old_locus_tag=TthAA11_22090 NZ_AP024927.1 GeneMarkS-2+ CDS 96699 97241 . - 0 ID=cds-WP_143587140.1;Parent=gene-LDO09_RS11180;Dbxref=Genbank:WP_143587140.1;Name=WP_143587140.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11180;product=hypothetical protein;protein_id=WP_143587140.1;transl_table=11 NZ_AP024927.1 RefSeq gene 97302 98546 . - . ID=gene-LDO09_RS11185;Name=LDO09_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11185;old_locus_tag=TthAA11_22100 NZ_AP024927.1 Protein Homology CDS 97302 98546 . - 0 ID=cds-WP_223967092.1;Parent=gene-LDO09_RS11185;Dbxref=Genbank:WP_223967092.1;Name=WP_223967092.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717007.1;locus_tag=LDO09_RS11185;product=Nramp family divalent metal transporter;protein_id=WP_223967092.1;transl_table=11 NZ_AP024927.1 RefSeq gene 98613 99131 . + . ID=gene-LDO09_RS11190;Name=LDO09_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11190;old_locus_tag=TthAA11_22110 NZ_AP024927.1 Protein Homology CDS 98613 99131 . + 0 ID=cds-WP_143587138.1;Parent=gene-LDO09_RS11190;Dbxref=Genbank:WP_143587138.1;Name=WP_143587138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717610.1;locus_tag=LDO09_RS11190;product=DUF421 domain-containing protein;protein_id=WP_143587138.1;transl_table=11 NZ_AP024927.1 RefSeq gene 99128 100081 . - . ID=gene-LDO09_RS11195;Name=LDO09_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11195;old_locus_tag=TthAA11_22120 NZ_AP024927.1 Protein Homology CDS 99128 100081 . - 0 ID=cds-WP_143587136.1;Parent=gene-LDO09_RS11195;Dbxref=Genbank:WP_143587136.1;Name=WP_143587136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586473.1;locus_tag=LDO09_RS11195;product=PIG-L family deacetylase;protein_id=WP_143587136.1;transl_table=11 NZ_AP024927.1 RefSeq gene 100106 101179 . - . ID=gene-LDO09_RS12150;Name=LDO09_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12150;old_locus_tag=TthAA11_22130 NZ_AP024927.1 Protein Homology CDS 100106 101179 . - 0 ID=cds-WP_143587134.1;Parent=gene-LDO09_RS12150;Dbxref=Genbank:WP_143587134.1;Name=WP_143587134.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012722.2;locus_tag=LDO09_RS12150;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_143587134.1;transl_table=11 NZ_AP024927.1 RefSeq pseudogene 101333 101985 . - . ID=gene-LDO09_RS11215;Name=LDO09_RS11215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS11215;old_locus_tag=TthAA11_22140;pseudo=true NZ_AP024927.1 Protein Homology CDS 101333 101985 . - 0 ID=cds-LDO09_RS11215;Parent=gene-LDO09_RS11215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013015275.1;locus_tag=LDO09_RS11215;product=response regulator transcription factor;pseudo=true;transl_table=11 NZ_AP024927.1 RefSeq gene 101960 102610 . - . ID=gene-LDO09_RS11220;Name=LDO09_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11220;old_locus_tag=TthAA11_22160 NZ_AP024927.1 Protein Homology CDS 101960 102610 . - 0 ID=cds-WP_143587132.1;Parent=gene-LDO09_RS11220;Dbxref=Genbank:WP_143587132.1;Name=WP_143587132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018465953.1;locus_tag=LDO09_RS11220;product=phosphatase PAP2 family protein;protein_id=WP_143587132.1;transl_table=11 NZ_AP024927.1 RefSeq gene 102613 103083 . - . ID=gene-LDO09_RS11225;Name=LDO09_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11225;old_locus_tag=TthAA11_22170 NZ_AP024927.1 GeneMarkS-2+ CDS 102613 103083 . - 0 ID=cds-WP_143587130.1;Parent=gene-LDO09_RS11225;Dbxref=Genbank:WP_143587130.1;Name=WP_143587130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11225;product=hypothetical protein;protein_id=WP_143587130.1;transl_table=11 NZ_AP024927.1 RefSeq gene 103138 103554 . - . ID=gene-LDO09_RS11230;Name=LDO09_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11230;old_locus_tag=TthAA11_22180 NZ_AP024927.1 Protein Homology CDS 103138 103554 . - 0 ID=cds-WP_143587128.1;Parent=gene-LDO09_RS11230;Dbxref=Genbank:WP_143587128.1;Name=WP_143587128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018465951.1;locus_tag=LDO09_RS11230;product=PepSY domain-containing protein;protein_id=WP_143587128.1;transl_table=11 NZ_AP024927.1 RefSeq gene 103653 104276 . + . ID=gene-LDO09_RS11235;Name=LDO09_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11235;old_locus_tag=TthAA11_22190 NZ_AP024927.1 Protein Homology CDS 103653 104276 . + 0 ID=cds-WP_172619240.1;Parent=gene-LDO09_RS11235;Dbxref=Genbank:WP_172619240.1;Name=WP_172619240.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013117.2;locus_tag=LDO09_RS11235;product=mechanosensitive ion channel;protein_id=WP_172619240.1;transl_table=11 NZ_AP024927.1 RefSeq gene 104302 104802 . - . ID=gene-LDO09_RS11240;Name=LDO09_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11240;old_locus_tag=TthAA11_22200 NZ_AP024927.1 Protein Homology CDS 104302 104802 . - 0 ID=cds-WP_143587124.1;Parent=gene-LDO09_RS11240;Dbxref=Genbank:WP_143587124.1;Name=WP_143587124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014684148.1;locus_tag=LDO09_RS11240;product=VIT family protein;protein_id=WP_143587124.1;transl_table=11 NZ_AP024927.1 RefSeq gene 104854 105204 . - . ID=gene-LDO09_RS11245;Name=LDO09_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11245;old_locus_tag=TthAA11_22210 NZ_AP024927.1 Protein Homology CDS 104854 105204 . - 0 ID=cds-WP_143587122.1;Parent=gene-LDO09_RS11245;Dbxref=Genbank:WP_143587122.1;Name=WP_143587122.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019459.2;locus_tag=LDO09_RS11245;product=DUF1634 domain-containing protein;protein_id=WP_143587122.1;transl_table=11 NZ_AP024927.1 RefSeq gene 105208 105783 . - . ID=gene-LDO09_RS11250;Name=LDO09_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11250;old_locus_tag=TthAA11_22220 NZ_AP024927.1 Protein Homology CDS 105208 105783 . - 0 ID=cds-WP_143587120.1;Parent=gene-LDO09_RS11250;Dbxref=Genbank:WP_143587120.1;Name=WP_143587120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717608.1;locus_tag=LDO09_RS11250;product=sulfite exporter TauE/SafE family protein;protein_id=WP_143587120.1;transl_table=11 NZ_AP024927.1 RefSeq gene 105793 106386 . - . ID=gene-LDO09_RS11255;Name=LDO09_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11255;old_locus_tag=TthAA11_22230 NZ_AP024927.1 Protein Homology CDS 105793 106386 . - 0 ID=cds-WP_143587118.1;Parent=gene-LDO09_RS11255;Dbxref=Genbank:WP_143587118.1;Name=WP_143587118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013704946.1;locus_tag=LDO09_RS11255;product=Rieske (2Fe-2S) protein;protein_id=WP_143587118.1;transl_table=11 NZ_AP024927.1 RefSeq gene 106390 108663 . - . ID=gene-LDO09_RS11260;Name=LDO09_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11260;old_locus_tag=TthAA11_22240 NZ_AP024927.1 Protein Homology CDS 106390 108663 . - 0 ID=cds-WP_143587116.1;Parent=gene-LDO09_RS11260;Dbxref=Genbank:WP_143587116.1;Name=WP_143587116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717021.1;locus_tag=LDO09_RS11260;product=glycoside hydrolase family 15 protein;protein_id=WP_143587116.1;transl_table=11 NZ_AP024927.1 RefSeq gene 108664 109311 . - . ID=gene-LDO09_RS11265;Name=LDO09_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11265;old_locus_tag=TthAA11_22250 NZ_AP024927.1 Protein Homology CDS 108664 109311 . - 0 ID=cds-WP_143587114.1;Parent=gene-LDO09_RS11265;Dbxref=Genbank:WP_143587114.1;Name=WP_143587114.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF013356.2;locus_tag=LDO09_RS11265;product=6-phosphogluconolactonase;protein_id=WP_143587114.1;transl_table=11 NZ_AP024927.1 RefSeq gene 109308 110216 . - . ID=gene-LDO09_RS11270;Name=LDO09_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11270;old_locus_tag=TthAA11_22260 NZ_AP024927.1 Protein Homology CDS 109308 110216 . - 0 ID=cds-WP_172619239.1;Parent=gene-LDO09_RS11270;Dbxref=Genbank:WP_172619239.1;Name=WP_172619239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717019.1;locus_tag=LDO09_RS11270;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_172619239.1;transl_table=11 NZ_AP024927.1 RefSeq gene 110220 111602 . - . ID=gene-LDO09_RS11275;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LDO09_RS11275;old_locus_tag=TthAA11_22270 NZ_AP024927.1 Protein Homology CDS 110220 111602 . - 0 ID=cds-WP_143587112.1;Parent=gene-LDO09_RS11275;Dbxref=Genbank:WP_143587112.1;Name=WP_143587112.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012844787.1;locus_tag=LDO09_RS11275;product=glucose-6-phosphate dehydrogenase;protein_id=WP_143587112.1;transl_table=11 NZ_AP024927.1 RefSeq gene 111697 112533 . - . ID=gene-LDO09_RS11280;Name=LDO09_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11280;old_locus_tag=TthAA11_22280 NZ_AP024927.1 Protein Homology CDS 111697 112533 . - 0 ID=cds-WP_223967006.1;Parent=gene-LDO09_RS11280;Dbxref=Genbank:WP_223967006.1;Name=WP_223967006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717016.1;locus_tag=LDO09_RS11280;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_223967006.1;transl_table=11 NZ_AP024927.1 RefSeq gene 112530 113738 . - . ID=gene-LDO09_RS11285;Name=LDO09_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11285;old_locus_tag=TthAA11_22290 NZ_AP024927.1 Protein Homology CDS 112530 113738 . - 0 ID=cds-WP_143590100.1;Parent=gene-LDO09_RS11285;Dbxref=Genbank:WP_143590100.1;Name=WP_143590100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717015.1;locus_tag=LDO09_RS11285;product=trypsin-like peptidase domain-containing protein;protein_id=WP_143590100.1;transl_table=11 NZ_AP024927.1 RefSeq gene 113773 113973 . - . ID=gene-LDO09_RS11290;Name=LDO09_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11290;old_locus_tag=TthAA11_22300 NZ_AP024927.1 GeneMarkS-2+ CDS 113773 113973 . - 0 ID=cds-WP_143587110.1;Parent=gene-LDO09_RS11290;Dbxref=Genbank:WP_143587110.1;Name=WP_143587110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11290;product=hypothetical protein;protein_id=WP_143587110.1;transl_table=11 NZ_AP024927.1 RefSeq gene 114093 115019 . + . ID=gene-LDO09_RS11295;Name=LDO09_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11295;old_locus_tag=TthAA11_22310 NZ_AP024927.1 Protein Homology CDS 114093 115019 . + 0 ID=cds-WP_143587108.1;Parent=gene-LDO09_RS11295;Dbxref=Genbank:WP_143587108.1;Name=WP_143587108.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013740.2;locus_tag=LDO09_RS11295;product=AI-2E family transporter;protein_id=WP_143587108.1;transl_table=11 NZ_AP024927.1 RefSeq gene 115016 116872 . - . ID=gene-LDO09_RS11300;Name=LDO09_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11300;old_locus_tag=TthAA11_22320 NZ_AP024927.1 Protein Homology CDS 115016 116872 . - 0 ID=cds-WP_143587106.1;Parent=gene-LDO09_RS11300;Dbxref=Genbank:WP_143587106.1;Name=WP_143587106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007508680.1;locus_tag=LDO09_RS11300;product=amino acid transporter;protein_id=WP_143587106.1;transl_table=11 NZ_AP024927.1 RefSeq gene 116947 118071 . - . ID=gene-LDO09_RS11305;Name=LDO09_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11305;old_locus_tag=TthAA11_22330 NZ_AP024927.1 Protein Homology CDS 116947 118071 . - 0 ID=cds-WP_143587104.1;Parent=gene-LDO09_RS11305;Dbxref=Genbank:WP_143587104.1;Name=WP_143587104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013159057.1;locus_tag=LDO09_RS11305;product=polysaccharide deacetylase family protein;protein_id=WP_143587104.1;transl_table=11 NZ_AP024927.1 RefSeq gene 118081 119004 . - . ID=gene-LDO09_RS11315;Name=LDO09_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11315;old_locus_tag=TthAA11_22340 NZ_AP024927.1 GeneMarkS-2+ CDS 118081 119004 . - 0 ID=cds-WP_143587102.1;Parent=gene-LDO09_RS11315;Dbxref=Genbank:WP_143587102.1;Name=WP_143587102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11315;product=hypothetical protein;protein_id=WP_143587102.1;transl_table=11 NZ_AP024927.1 RefSeq gene 119111 119563 . + . ID=gene-LDO09_RS11320;Name=LDO09_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11320;old_locus_tag=TthAA11_22360 NZ_AP024927.1 Protein Homology CDS 119111 119563 . + 0 ID=cds-WP_143587100.1;Parent=gene-LDO09_RS11320;Dbxref=Genbank:WP_143587100.1;Name=WP_143587100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717006.1;locus_tag=LDO09_RS11320;product=cytochrome c;protein_id=WP_143587100.1;transl_table=11 NZ_AP024927.1 RefSeq gene 119564 120223 . + . ID=gene-LDO09_RS11325;Name=LDO09_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11325;old_locus_tag=TthAA11_22370 NZ_AP024927.1 Protein Homology CDS 119564 120223 . + 0 ID=cds-WP_143587098.1;Parent=gene-LDO09_RS11325;Dbxref=Genbank:WP_143587098.1;Name=WP_143587098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717005.1;locus_tag=LDO09_RS11325;product=response regulator transcription factor;protein_id=WP_143587098.1;transl_table=11 NZ_AP024927.1 RefSeq gene 120220 121491 . + . ID=gene-LDO09_RS11330;Name=LDO09_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11330;old_locus_tag=TthAA11_22380 NZ_AP024927.1 Protein Homology CDS 120220 121491 . + 0 ID=cds-WP_143587096.1;Parent=gene-LDO09_RS11330;Dbxref=Genbank:WP_143587096.1;Name=WP_143587096.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012722.2;locus_tag=LDO09_RS11330;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_143587096.1;transl_table=11 NZ_AP024927.1 RefSeq gene 121488 121904 . + . ID=gene-LDO09_RS11335;Name=LDO09_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11335;old_locus_tag=TthAA11_22390 NZ_AP024927.1 GeneMarkS-2+ CDS 121488 121904 . + 0 ID=cds-WP_223967016.1;Parent=gene-LDO09_RS11335;Dbxref=Genbank:WP_223967016.1;Name=WP_223967016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11335;product=hypothetical protein;protein_id=WP_223967016.1;transl_table=11 NZ_AP024927.1 RefSeq gene 122424 122603 . + . ID=gene-LDO09_RS11340;Name=LDO09_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11340 NZ_AP024927.1 GeneMarkS-2+ CDS 122424 122603 . + 0 ID=cds-WP_172619238.1;Parent=gene-LDO09_RS11340;Dbxref=Genbank:WP_172619238.1;Name=WP_172619238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11340;product=hypothetical protein;protein_id=WP_172619238.1;transl_table=11 NZ_AP024927.1 RefSeq gene 123215 123670 . - . ID=gene-LDO09_RS11345;Name=LDO09_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11345;old_locus_tag=TthAA11_22410 NZ_AP024927.1 Protein Homology CDS 123215 123670 . - 0 ID=cds-WP_267461199.1;Parent=gene-LDO09_RS11345;Dbxref=Genbank:WP_267461199.1;Name=WP_267461199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511107.1;locus_tag=LDO09_RS11345;product=PIN domain-containing protein;protein_id=WP_267461199.1;transl_table=11 NZ_AP024927.1 RefSeq gene 123651 123893 . - . ID=gene-LDO09_RS11350;Name=LDO09_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11350;old_locus_tag=TthAA11_22420 NZ_AP024927.1 Protein Homology CDS 123651 123893 . - 0 ID=cds-WP_223969174.1;Parent=gene-LDO09_RS11350;Dbxref=Genbank:WP_223969174.1;Name=WP_223969174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008633599.1;locus_tag=LDO09_RS11350;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_223969174.1;transl_table=11 NZ_AP024927.1 RefSeq gene 124003 124290 . - . ID=gene-LDO09_RS11355;Name=LDO09_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11355 NZ_AP024927.1 GeneMarkS-2+ CDS 124003 124290 . - 0 ID=cds-WP_223969176.1;Parent=gene-LDO09_RS11355;Dbxref=Genbank:WP_223969176.1;Name=WP_223969176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11355;product=hypothetical protein;protein_id=WP_223969176.1;transl_table=11 NZ_AP024927.1 RefSeq pseudogene 124357 124410 . + . ID=gene-LDO09_RS12155;Name=LDO09_RS12155;end_range=124410,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS12155;partial=true;pseudo=true NZ_AP024927.1 Protein Homology CDS 124357 124410 . + 0 ID=cds-LDO09_RS12155;Parent=gene-LDO09_RS12155;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=124410,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024980.2;locus_tag=LDO09_RS12155;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_AP024927.1 RefSeq gene 124532 125074 . + . ID=gene-LDO09_RS11365;Name=LDO09_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11365;old_locus_tag=TthAA11_22440 NZ_AP024927.1 Protein Homology CDS 124532 125074 . + 0 ID=cds-WP_223969178.1;Parent=gene-LDO09_RS11365;Dbxref=Genbank:WP_223969178.1;Name=WP_223969178.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033545.0;locus_tag=LDO09_RS11365;product=IS630 family transposase;protein_id=WP_223969178.1;transl_table=11 NZ_AP024927.1 RefSeq gene 125155 130077 . - . ID=gene-LDO09_RS11370;Name=LDO09_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11370;old_locus_tag=TthAA11_22450 NZ_AP024927.1 Protein Homology CDS 125155 130077 . - 0 ID=cds-WP_223969181.1;Parent=gene-LDO09_RS11370;Dbxref=Genbank:WP_223969181.1;Name=WP_223969181.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014435151.1;locus_tag=LDO09_RS11370;product=DEAD/DEAH box helicase;protein_id=WP_223969181.1;transl_table=11 NZ_AP024927.1 RefSeq gene 130074 132791 . - . ID=gene-LDO09_RS11375;Name=LDO09_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11375;old_locus_tag=TthAA11_22460 NZ_AP024927.1 Protein Homology CDS 130074 132791 . - 0 ID=cds-WP_267461204.1;Parent=gene-LDO09_RS11375;Dbxref=Genbank:WP_267461204.1;Name=WP_267461204.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=LDO09_RS11375;product=hypothetical protein;protein_id=WP_267461204.1;transl_table=11 NZ_AP024927.1 RefSeq gene 132749 134194 . - . ID=gene-LDO09_RS12160;Name=LDO09_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12160;old_locus_tag=TthAA11_22470 NZ_AP024927.1 GeneMarkS-2+ CDS 132749 134194 . - 0 ID=cds-WP_267461200.1;Parent=gene-LDO09_RS12160;Dbxref=Genbank:WP_267461200.1;Name=WP_267461200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS12160;product=hypothetical protein;protein_id=WP_267461200.1;transl_table=11 NZ_AP024927.1 RefSeq gene 134236 137004 . - . ID=gene-LDO09_RS11380;Name=LDO09_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11380;old_locus_tag=TthAA11_22480 NZ_AP024927.1 Protein Homology CDS 134236 137004 . - 0 ID=cds-WP_223969186.1;Parent=gene-LDO09_RS11380;Dbxref=Genbank:WP_223969186.1;Name=WP_223969186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015739328.1;locus_tag=LDO09_RS11380;product=helicase-related protein;protein_id=WP_223969186.1;transl_table=11 NZ_AP024927.1 RefSeq gene 137087 137467 . - . ID=gene-LDO09_RS11385;Name=LDO09_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11385;old_locus_tag=TthAA11_22490 NZ_AP024927.1 GeneMarkS-2+ CDS 137087 137467 . - 0 ID=cds-WP_223969188.1;Parent=gene-LDO09_RS11385;Dbxref=Genbank:WP_223969188.1;Name=WP_223969188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11385;product=hypothetical protein;protein_id=WP_223969188.1;transl_table=11 NZ_AP024927.1 RefSeq gene 137475 138038 . - . ID=gene-LDO09_RS11390;Name=LDO09_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11390;old_locus_tag=TthAA11_22500 NZ_AP024927.1 GeneMarkS-2+ CDS 137475 138038 . - 0 ID=cds-WP_223969191.1;Parent=gene-LDO09_RS11390;Dbxref=Genbank:WP_223969191.1;Name=WP_223969191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11390;product=hypothetical protein;protein_id=WP_223969191.1;transl_table=11 NZ_AP024927.1 RefSeq gene 138327 139427 . - . ID=gene-LDO09_RS11395;Name=LDO09_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11395;old_locus_tag=TthAA11_22510 NZ_AP024927.1 Protein Homology CDS 138327 139427 . - 0 ID=cds-WP_223969193.1;Parent=gene-LDO09_RS11395;Dbxref=Genbank:WP_223969193.1;Name=WP_223969193.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511178.1;locus_tag=LDO09_RS11395;product=transposase;protein_id=WP_223969193.1;transl_table=11 NZ_AP024927.1 RefSeq gene 139436 142993 . - . ID=gene-LDO09_RS11400;Name=LDO09_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11400;old_locus_tag=TthAA11_22520 NZ_AP024927.1 Protein Homology CDS 139436 142993 . - 0 ID=cds-WP_223969196.1;Parent=gene-LDO09_RS11400;Dbxref=Genbank:WP_223969196.1;Name=WP_223969196.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012492.2;locus_tag=LDO09_RS11400;product=DEAD/DEAH box helicase;protein_id=WP_223969196.1;transl_table=11 NZ_AP024927.1 RefSeq pseudogene 143011 143799 . - . ID=gene-LDO09_RS11405;Name=LDO09_RS11405;end_range=143799,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS11405;old_locus_tag=TthAA11_22530;partial=true;pseudo=true NZ_AP024927.1 Protein Homology CDS 143011 143799 . - 0 ID=cds-LDO09_RS11405;Parent=gene-LDO09_RS11405;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000910,GO:0007059,GO:0003677;end_range=143799,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229174.1;locus_tag=LDO09_RS11405;partial=true;product=ParB/RepB/Spo0J family partition protein;pseudo=true;transl_table=11 NZ_AP024927.1 RefSeq gene 143960 144298 . - . ID=gene-LDO09_RS11410;Name=LDO09_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11410;old_locus_tag=TthAA11_22540 NZ_AP024927.1 GeneMarkS-2+ CDS 143960 144298 . - 0 ID=cds-WP_223969199.1;Parent=gene-LDO09_RS11410;Dbxref=Genbank:WP_223969199.1;Name=WP_223969199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11410;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_223969199.1;transl_table=11 NZ_AP024927.1 RefSeq gene 144562 145407 . + . ID=gene-LDO09_RS11420;Name=LDO09_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11420;old_locus_tag=TthAA11_22550 NZ_AP024927.1 Protein Homology CDS 144562 145407 . + 0 ID=cds-WP_223965641.1;Parent=gene-LDO09_RS11420;Dbxref=Genbank:WP_223965641.1;Name=WP_223965641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013704078.1;locus_tag=LDO09_RS11420;product=transposase;protein_id=WP_223965641.1;transl_table=11 NZ_AP024927.1 RefSeq gene 145402 145908 . - . ID=gene-LDO09_RS11425;Name=LDO09_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11425;old_locus_tag=TthAA11_22560 NZ_AP024927.1 Protein Homology CDS 145402 145908 . - 0 ID=cds-WP_223969201.1;Parent=gene-LDO09_RS11425;Dbxref=Genbank:WP_223969201.1;Name=WP_223969201.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018498.2;locus_tag=LDO09_RS11425;product=Tm-1-like ATP-binding domain-containing protein;protein_id=WP_223969201.1;transl_table=11 NZ_AP024927.1 RefSeq gene 145918 146781 . - . ID=gene-LDO09_RS11430;Name=LDO09_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11430;old_locus_tag=TthAA11_22570 NZ_AP024927.1 Protein Homology CDS 145918 146781 . - 0 ID=cds-WP_126170690.1;Parent=gene-LDO09_RS11430;Dbxref=Genbank:WP_126170690.1;Name=WP_126170690.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014670.2;locus_tag=LDO09_RS11430;product=creatininase family protein;protein_id=WP_126170690.1;transl_table=11 NZ_AP024927.1 RefSeq gene 146943 147674 . + . ID=gene-LDO09_RS11435;Name=LDO09_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11435;old_locus_tag=TthAA11_22580 NZ_AP024927.1 Protein Homology CDS 146943 147674 . + 0 ID=cds-WP_223969204.1;Parent=gene-LDO09_RS11435;Dbxref=Genbank:WP_223969204.1;Name=WP_223969204.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019349.2;locus_tag=LDO09_RS11435;product=GntR family transcriptional regulator;protein_id=WP_223969204.1;transl_table=11 NZ_AP024927.1 RefSeq gene 147671 148759 . + . ID=gene-LDO09_RS11440;Name=LDO09_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11440;old_locus_tag=TthAA11_22590 NZ_AP024927.1 Protein Homology CDS 147671 148759 . + 0 ID=cds-WP_126170014.1;Parent=gene-LDO09_RS11440;Dbxref=Genbank:WP_126170014.1;Name=WP_126170014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018062506.1;locus_tag=LDO09_RS11440;product=zinc-binding dehydrogenase;protein_id=WP_126170014.1;transl_table=11 NZ_AP024927.1 RefSeq gene 148981 149190 . + . ID=gene-LDO09_RS12040;Name=LDO09_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12040 NZ_AP024927.1 Protein Homology CDS 148981 149190 . + 0 ID=cds-WP_228744759.1;Parent=gene-LDO09_RS12040;Dbxref=Genbank:WP_228744759.1;Name=WP_228744759.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012780.2;locus_tag=LDO09_RS12040;product=CBS domain-containing protein;protein_id=WP_228744759.1;transl_table=11 NZ_AP024927.1 RefSeq gene 149220 150122 . + . ID=gene-LDO09_RS11450;Name=LDO09_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11450;old_locus_tag=TthAA11_22610 NZ_AP024927.1 Protein Homology CDS 149220 150122 . + 0 ID=cds-WP_223969206.1;Parent=gene-LDO09_RS11450;Dbxref=Genbank:WP_223969206.1;Name=WP_223969206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018206172.1;locus_tag=LDO09_RS11450;product=sugar phosphate isomerase/epimerase;protein_id=WP_223969206.1;transl_table=11 NZ_AP024927.1 RefSeq gene 150269 151588 . - . ID=gene-LDO09_RS11455;Name=LDO09_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11455;old_locus_tag=TthAA11_22620 NZ_AP024927.1 Protein Homology CDS 150269 151588 . - 0 ID=cds-WP_223969208.1;Parent=gene-LDO09_RS11455;Dbxref=Genbank:WP_223969208.1;Name=WP_223969208.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511191.1;locus_tag=LDO09_RS11455;product=MFS transporter;protein_id=WP_223969208.1;transl_table=11 NZ_AP024927.1 RefSeq gene 151601 152290 . - . ID=gene-LDO09_RS11460;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=LDO09_RS11460;old_locus_tag=TthAA11_22630 NZ_AP024927.1 Protein Homology CDS 151601 152290 . - 0 ID=cds-WP_223969210.1;Parent=gene-LDO09_RS11460;Dbxref=Genbank:WP_223969210.1;Name=WP_223969210.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511192.1;locus_tag=LDO09_RS11460;product=respiratory nitrate reductase subunit gamma;protein_id=WP_223969210.1;transl_table=11 NZ_AP024927.1 RefSeq gene 152294 152809 . - . ID=gene-LDO09_RS11465;Name=LDO09_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11465;old_locus_tag=TthAA11_22640 NZ_AP024927.1 Protein Homology CDS 152294 152809 . - 0 ID=cds-WP_014511193.1;Parent=gene-LDO09_RS11465;Dbxref=Genbank:WP_014511193.1;Name=WP_014511193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511193.1;locus_tag=LDO09_RS11465;product=molecular chaperone TorD family protein;protein_id=WP_014511193.1;transl_table=11 NZ_AP024927.1 RefSeq gene 152819 154354 . - . ID=gene-LDO09_RS11470;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=LDO09_RS11470;old_locus_tag=TthAA11_22650 NZ_AP024927.1 Protein Homology CDS 152819 154354 . - 0 ID=cds-WP_223969212.1;Parent=gene-LDO09_RS11470;Dbxref=Genbank:WP_223969212.1;Name=WP_223969212.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550639.1;locus_tag=LDO09_RS11470;product=nitrate reductase subunit beta;protein_id=WP_223969212.1;transl_table=11 NZ_AP024927.1 RefSeq gene 154366 157956 . - . ID=gene-LDO09_RS11475;Name=LDO09_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11475;old_locus_tag=TthAA11_22660 NZ_AP024927.1 Protein Homology CDS 154366 157956 . - 0 ID=cds-WP_223969214.1;Parent=gene-LDO09_RS11475;Dbxref=Genbank:WP_223969214.1;Name=WP_223969214.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016329282.1;locus_tag=LDO09_RS11475;product=nitrate reductase subunit alpha;protein_id=WP_223969214.1;transl_table=11 NZ_AP024927.1 RefSeq gene 157959 158747 . - . ID=gene-LDO09_RS11480;Name=LDO09_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11480;old_locus_tag=TthAA11_22670 NZ_AP024927.1 Protein Homology CDS 157959 158747 . - 0 ID=cds-WP_223969216.1;Parent=gene-LDO09_RS11480;Dbxref=Genbank:WP_223969216.1;Name=WP_223969216.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630612.1;locus_tag=LDO09_RS11480;product=c-type cytochrome;protein_id=WP_223969216.1;transl_table=11 NZ_AP024927.1 RefSeq gene 158843 160648 . + . ID=gene-LDO09_RS11485;Name=LDO09_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11485;old_locus_tag=TthAA11_22680 NZ_AP024927.1 Protein Homology CDS 158843 160648 . + 0 ID=cds-WP_223969218.1;Parent=gene-LDO09_RS11485;Dbxref=Genbank:WP_223969218.1;Name=WP_223969218.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511197.1;locus_tag=LDO09_RS11485;product=GAF domain-containing protein;protein_id=WP_223969218.1;transl_table=11 NZ_AP024927.1 RefSeq gene 160653 161306 . + . ID=gene-LDO09_RS11490;Name=LDO09_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11490;old_locus_tag=TthAA11_22690 NZ_AP024927.1 Protein Homology CDS 160653 161306 . + 0 ID=cds-WP_201351495.1;Parent=gene-LDO09_RS11490;Dbxref=Genbank:WP_201351495.1;Name=WP_201351495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630611.1;locus_tag=LDO09_RS11490;product=Crp/Fnr family transcriptional regulator;protein_id=WP_201351495.1;transl_table=11 NZ_AP024927.1 RefSeq gene 161395 161619 . + . ID=gene-LDO09_RS11495;Name=LDO09_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11495;old_locus_tag=TthAA11_22700 NZ_AP024927.1 Protein Homology CDS 161395 161619 . + 0 ID=cds-WP_223969388.1;Parent=gene-LDO09_RS11495;Dbxref=Genbank:WP_223969388.1;Name=WP_223969388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630610.1;locus_tag=LDO09_RS11495;product=FeoA family protein;protein_id=WP_223969388.1;transl_table=11 NZ_AP024927.1 RefSeq gene 161619 163025 . + . ID=gene-LDO09_RS11500;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=LDO09_RS11500;old_locus_tag=TthAA11_22710 NZ_AP024927.1 Protein Homology CDS 161619 163025 . + 0 ID=cds-WP_223969221.1;Parent=gene-LDO09_RS11500;Dbxref=Genbank:WP_223969221.1;Name=WP_223969221.1;Ontology_term=GO:0006826,GO:0015093;gbkey=CDS;gene=feoB;go_function=ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: protein motif:HMM:TIGR00437.1;locus_tag=LDO09_RS11500;product=ferrous iron transport protein B;protein_id=WP_223969221.1;transl_table=11 NZ_AP024927.1 RefSeq gene 163006 164586 . - . ID=gene-LDO09_RS11505;Name=LDO09_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11505;old_locus_tag=TthAA11_22720 NZ_AP024927.1 Protein Homology CDS 163006 164586 . - 0 ID=cds-WP_223969223.1;Parent=gene-LDO09_RS11505;Dbxref=Genbank:WP_223969223.1;Name=WP_223969223.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630183.1;locus_tag=LDO09_RS11505;product=IS200/IS605 family accessory protein TnpB-related protein;protein_id=WP_223969223.1;transl_table=11 NZ_AP024927.1 RefSeq gene 164719 165411 . + . ID=gene-LDO09_RS11510;Name=LDO09_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11510;old_locus_tag=TthAA11_22730 NZ_AP024927.1 Protein Homology CDS 164719 165411 . + 0 ID=cds-WP_223969225.1;Parent=gene-LDO09_RS11510;Dbxref=Genbank:WP_223969225.1;Name=WP_223969225.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019292.2;locus_tag=LDO09_RS11510;product=hypothetical protein;protein_id=WP_223969225.1;transl_table=11 NZ_AP024927.1 RefSeq gene 165408 165713 . + . ID=gene-LDO09_RS11515;Name=LDO09_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11515;old_locus_tag=TthAA11_22740 NZ_AP024927.1 Protein Homology CDS 165408 165713 . + 0 ID=cds-WP_165739988.1;Parent=gene-LDO09_RS11515;Dbxref=Genbank:WP_165739988.1;Name=WP_165739988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630608.1;locus_tag=LDO09_RS11515;product=hypothetical protein;protein_id=WP_165739988.1;transl_table=11 NZ_AP024927.1 RefSeq gene 165697 166263 . + . ID=gene-LDO09_RS11520;Name=LDO09_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11520;old_locus_tag=TthAA11_22750 NZ_AP024927.1 Protein Homology CDS 165697 166263 . + 0 ID=cds-WP_223969227.1;Parent=gene-LDO09_RS11520;Dbxref=Genbank:WP_223969227.1;Name=WP_223969227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630607.1;locus_tag=LDO09_RS11520;product=hemerythrin domain-containing protein;protein_id=WP_223969227.1;transl_table=11 NZ_AP024927.1 RefSeq gene 166260 167447 . - . ID=gene-LDO09_RS11525;Name=LDO09_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11525;old_locus_tag=TthAA11_22760 NZ_AP024927.1 Protein Homology CDS 166260 167447 . - 0 ID=cds-WP_143587220.1;Parent=gene-LDO09_RS11525;Dbxref=Genbank:WP_143587220.1;Name=WP_143587220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019550627.1;locus_tag=LDO09_RS11525;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_143587220.1;transl_table=11 NZ_AP024927.1 RefSeq gene 167575 168273 . - . ID=gene-LDO09_RS11530;Name=LDO09_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11530;old_locus_tag=TthAA11_22770 NZ_AP024927.1 Protein Homology CDS 167575 168273 . - 0 ID=cds-WP_143587222.1;Parent=gene-LDO09_RS11530;Dbxref=Genbank:WP_143587222.1;Name=WP_143587222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011228693.1;locus_tag=LDO09_RS11530;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_143587222.1;transl_table=11 NZ_AP024927.1 RefSeq gene 168270 169361 . - . ID=gene-LDO09_RS11535;Name=LDO09_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11535;old_locus_tag=TthAA11_22780 NZ_AP024927.1 Protein Homology CDS 168270 169361 . - 0 ID=cds-WP_223969229.1;Parent=gene-LDO09_RS11535;Dbxref=Genbank:WP_223969229.1;Name=WP_223969229.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013379.2;locus_tag=LDO09_RS11535;product=sulfurtransferase TusA family protein;protein_id=WP_223969229.1;transl_table=11 NZ_AP024927.1 RefSeq gene 169363 169626 . - . ID=gene-LDO09_RS11540;Name=LDO09_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11540;old_locus_tag=TthAA11_22790 NZ_AP024927.1 Protein Homology CDS 169363 169626 . - 0 ID=cds-WP_014630603.1;Parent=gene-LDO09_RS11540;Dbxref=Genbank:WP_014630603.1;Name=WP_014630603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511199.1;locus_tag=LDO09_RS11540;product=ferredoxin family protein;protein_id=WP_014630603.1;transl_table=11 NZ_AP024927.1 RefSeq gene 169683 170099 . - . ID=gene-LDO09_RS11545;Name=LDO09_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11545;old_locus_tag=TthAA11_22800 NZ_AP024927.1 Protein Homology CDS 169683 170099 . - 0 ID=cds-WP_223969231.1;Parent=gene-LDO09_RS11545;Dbxref=Genbank:WP_223969231.1;Name=WP_223969231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511200.1;locus_tag=LDO09_RS11545;product=PIN domain-containing protein;protein_id=WP_223969231.1;transl_table=11 NZ_AP024927.1 RefSeq gene 170080 170322 . - . ID=gene-LDO09_RS11550;Name=LDO09_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11550;old_locus_tag=TthAA11_22810 NZ_AP024927.1 Protein Homology CDS 170080 170322 . - 0 ID=cds-WP_014511201.1;Parent=gene-LDO09_RS11550;Dbxref=Genbank:WP_014511201.1;Name=WP_014511201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019551189.1;locus_tag=LDO09_RS11550;product=hypothetical protein;protein_id=WP_014511201.1;transl_table=11 NZ_AP024927.1 RefSeq gene 170410 170805 . + . ID=gene-LDO09_RS11555;Name=LDO09_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11555;old_locus_tag=TthAA11_22820 NZ_AP024927.1 Protein Homology CDS 170410 170805 . + 0 ID=cds-WP_014511202.1;Parent=gene-LDO09_RS11555;Dbxref=Genbank:WP_014511202.1;Name=WP_014511202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229165.1;locus_tag=LDO09_RS11555;product=hypothetical protein;protein_id=WP_014511202.1;transl_table=11 NZ_AP024927.1 RefSeq pseudogene 170816 171061 . + . ID=gene-LDO09_RS11560;Name=LDO09_RS11560;end_range=171061,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS11560;partial=true;pseudo=true NZ_AP024927.1 Protein Homology CDS 170816 171061 . + 0 ID=cds-LDO09_RS11560;Parent=gene-LDO09_RS11560;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=171061,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630599.1;locus_tag=LDO09_RS11560;partial=true;product=DUF488 family protein;pseudo=true;transl_table=11 NZ_AP024927.1 RefSeq gene 171167 171652 . - . ID=gene-LDO09_RS11565;Name=LDO09_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11565;old_locus_tag=TthAA11_22830 NZ_AP024927.1 Protein Homology CDS 171167 171652 . - 0 ID=cds-WP_124105663.1;Parent=gene-LDO09_RS11565;Dbxref=Genbank:WP_124105663.1;Name=WP_124105663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511203.1;locus_tag=LDO09_RS11565;product=helix-turn-helix domain-containing protein;protein_id=WP_124105663.1;transl_table=11 NZ_AP024927.1 RefSeq gene 171865 172239 . - . ID=gene-LDO09_RS11570;Name=LDO09_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11570;old_locus_tag=TthAA11_22840 NZ_AP024927.1 Protein Homology CDS 171865 172239 . - 0 ID=cds-WP_014511204.1;Parent=gene-LDO09_RS11570;Dbxref=Genbank:WP_014511204.1;Name=WP_014511204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018110732.1;locus_tag=LDO09_RS11570;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_014511204.1;transl_table=11 NZ_AP024927.1 RefSeq gene 172220 172501 . - . ID=gene-LDO09_RS11575;Name=LDO09_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11575;old_locus_tag=TthAA11_22850 NZ_AP024927.1 Protein Homology CDS 172220 172501 . - 0 ID=cds-WP_223969233.1;Parent=gene-LDO09_RS11575;Dbxref=Genbank:WP_223969233.1;Name=WP_223969233.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511205.1;locus_tag=LDO09_RS11575;product=type II toxin-antitoxin system prevent-host-death family antitoxin;protein_id=WP_223969233.1;transl_table=11 NZ_AP024927.1 RefSeq gene 172969 173091 . - . ID=gene-LDO09_RS12165;Name=LDO09_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12165 NZ_AP024927.1 GeneMarkS-2+ CDS 172969 173091 . - 0 ID=cds-WP_267461201.1;Parent=gene-LDO09_RS12165;Dbxref=Genbank:WP_267461201.1;Name=WP_267461201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS12165;product=hypothetical protein;protein_id=WP_267461201.1;transl_table=11 NZ_AP024927.1 RefSeq gene 173654 173860 . - . ID=gene-LDO09_RS11580;Name=LDO09_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11580;old_locus_tag=TthAA11_22880 NZ_AP024927.1 Protein Homology CDS 173654 173860 . - 0 ID=cds-WP_223969235.1;Parent=gene-LDO09_RS11580;Dbxref=Genbank:WP_223969235.1;Name=WP_223969235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511207.1;locus_tag=LDO09_RS11580;product=hypothetical protein;protein_id=WP_223969235.1;transl_table=11 NZ_AP024927.1 RefSeq gene 173857 174261 . - . ID=gene-LDO09_RS11585;Name=LDO09_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11585;old_locus_tag=TthAA11_22890 NZ_AP024927.1 Protein Homology CDS 173857 174261 . - 0 ID=cds-WP_014630483.1;Parent=gene-LDO09_RS11585;Dbxref=Genbank:WP_014630483.1;Name=WP_014630483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174465.1;locus_tag=LDO09_RS11585;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_014630483.1;transl_table=11 NZ_AP024927.1 RefSeq gene 174258 174488 . - . ID=gene-LDO09_RS11590;Name=LDO09_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11590;old_locus_tag=TthAA11_22900 NZ_AP024927.1 Protein Homology CDS 174258 174488 . - 0 ID=cds-WP_011229268.1;Parent=gene-LDO09_RS11590;Dbxref=Genbank:WP_011229268.1;Name=WP_011229268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229268.1;locus_tag=LDO09_RS11590;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_011229268.1;transl_table=11 NZ_AP024927.1 RefSeq gene 174703 175233 . - . ID=gene-LDO09_RS11595;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LDO09_RS11595;old_locus_tag=TthAA11_22910 NZ_AP024927.1 Protein Homology CDS 174703 175233 . - 0 ID=cds-WP_223969237.1;Parent=gene-LDO09_RS11595;Dbxref=Genbank:WP_223969237.1;Name=WP_223969237.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229167.1;locus_tag=LDO09_RS11595;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_223969237.1;transl_table=11 NZ_AP024927.1 RefSeq gene 175326 175646 . + . ID=gene-LDO09_RS11600;Name=LDO09_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11600;old_locus_tag=TthAA11_22920 NZ_AP024927.1 Protein Homology CDS 175326 175646 . + 0 ID=cds-WP_223969240.1;Parent=gene-LDO09_RS11600;Dbxref=Genbank:WP_223969240.1;Name=WP_223969240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630596.1;locus_tag=LDO09_RS11600;product=hypothetical protein;protein_id=WP_223969240.1;transl_table=11 NZ_AP024927.1 RefSeq gene 175722 176186 . + . ID=gene-LDO09_RS11605;Name=LDO09_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11605;old_locus_tag=TthAA11_22930 NZ_AP024927.1 Protein Homology CDS 175722 176186 . + 0 ID=cds-WP_223969242.1;Parent=gene-LDO09_RS11605;Dbxref=Genbank:WP_223969242.1;Name=WP_223969242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630595.1;locus_tag=LDO09_RS11605;product=cytochrome P460 family protein;protein_id=WP_223969242.1;transl_table=11 NZ_AP024927.1 RefSeq gene 176196 176738 . + . ID=gene-LDO09_RS11610;Name=LDO09_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11610;old_locus_tag=TthAA11_22940 NZ_AP024927.1 Protein Homology CDS 176196 176738 . + 0 ID=cds-WP_223969244.1;Parent=gene-LDO09_RS11610;Dbxref=Genbank:WP_223969244.1;Name=WP_223969244.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630594.1;locus_tag=LDO09_RS11610;product=MarR family transcriptional regulator;protein_id=WP_223969244.1;transl_table=11 NZ_AP024927.1 RefSeq gene 176735 177166 . - . ID=gene-LDO09_RS11615;Name=LDO09_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11615;old_locus_tag=TthAA11_22950 NZ_AP024927.1 Protein Homology CDS 176735 177166 . - 0 ID=cds-WP_217284012.1;Parent=gene-LDO09_RS11615;Dbxref=Genbank:WP_217284012.1;Name=WP_217284012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511209.1;locus_tag=LDO09_RS11615;product=cytochrome c;protein_id=WP_217284012.1;transl_table=11 NZ_AP024927.1 RefSeq gene 177175 178302 . - . ID=gene-LDO09_RS11620;Name=LDO09_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11620;old_locus_tag=TthAA11_22960 NZ_AP024927.1 Protein Homology CDS 177175 178302 . - 0 ID=cds-WP_223969246.1;Parent=gene-LDO09_RS11620;Dbxref=Genbank:WP_223969246.1;Name=WP_223969246.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511210.1;locus_tag=LDO09_RS11620;product=TIGR04053 family radical SAM/SPASM domain-containing protein;protein_id=WP_223969246.1;transl_table=11 NZ_AP024927.1 RefSeq gene 178384 179994 . - . ID=gene-LDO09_RS11625;Name=LDO09_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11625;old_locus_tag=TthAA11_22970 NZ_AP024927.1 Protein Homology CDS 178384 179994 . - 0 ID=cds-WP_014630591.1;Parent=gene-LDO09_RS11625;Dbxref=Genbank:WP_014630591.1;Name=WP_014630591.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630591.1;locus_tag=LDO09_RS11625;product=nitrite reductase;protein_id=WP_014630591.1;transl_table=11 NZ_AP024927.1 RefSeq gene 180113 180409 . - . ID=gene-LDO09_RS11630;Name=LDO09_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11630;old_locus_tag=TthAA11_22980 NZ_AP024927.1 Protein Homology CDS 180113 180409 . - 0 ID=cds-WP_014511212.1;Parent=gene-LDO09_RS11630;Dbxref=Genbank:WP_014511212.1;Name=WP_014511212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717638.1;locus_tag=LDO09_RS11630;product=hypothetical protein;protein_id=WP_014511212.1;transl_table=11 NZ_AP024927.1 RefSeq gene 180402 181832 . - . ID=gene-LDO09_RS11635;Name=LDO09_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11635;old_locus_tag=TthAA11_22990 NZ_AP024927.1 Protein Homology CDS 180402 181832 . - 0 ID=cds-WP_014630590.1;Parent=gene-LDO09_RS11635;Dbxref=Genbank:WP_014630590.1;Name=WP_014630590.1;Ontology_term=GO:0009060,GO:0004129,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,heme binding|0020037||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511213.1;locus_tag=LDO09_RS11635;product=cbb3-type cytochrome c oxidase subunit I;protein_id=WP_014630590.1;transl_table=11 NZ_AP024927.1 RefSeq gene 181843 182508 . - . ID=gene-LDO09_RS11640;Name=LDO09_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11640;old_locus_tag=TthAA11_23000 NZ_AP024927.1 Protein Homology CDS 181843 182508 . - 0 ID=cds-WP_223969248.1;Parent=gene-LDO09_RS11640;Dbxref=Genbank:WP_223969248.1;Name=WP_223969248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717640.1;locus_tag=LDO09_RS11640;product=cytochrome c;protein_id=WP_223969248.1;transl_table=11 NZ_AP024927.1 RefSeq gene 182638 183060 . + . ID=gene-LDO09_RS11645;Name=LDO09_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11645;old_locus_tag=TthAA11_23010 NZ_AP024927.1 Protein Homology CDS 182638 183060 . + 0 ID=cds-WP_223969250.1;Parent=gene-LDO09_RS11645;Dbxref=Genbank:WP_223969250.1;Name=WP_223969250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511215.1;locus_tag=LDO09_RS11645;product=Rrf2 family transcriptional regulator;protein_id=WP_223969250.1;transl_table=11 NZ_AP024927.1 RefSeq gene 183108 183305 . + . ID=gene-LDO09_RS11650;Name=LDO09_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11650;old_locus_tag=TthAA11_23020 NZ_AP024927.1 Protein Homology CDS 183108 183305 . + 0 ID=cds-WP_124105678.1;Parent=gene-LDO09_RS11650;Dbxref=Genbank:WP_124105678.1;Name=WP_124105678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511216.1;locus_tag=LDO09_RS11650;product=DUF542 domain-containing protein;protein_id=WP_124105678.1;transl_table=11 NZ_AP024927.1 RefSeq gene 183302 183598 . + . ID=gene-LDO09_RS11655;Name=LDO09_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11655;old_locus_tag=TthAA11_23030 NZ_AP024927.1 Protein Homology CDS 183302 183598 . + 0 ID=cds-WP_014511217.1;Parent=gene-LDO09_RS11655;Dbxref=Genbank:WP_014511217.1;Name=WP_014511217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717647.1;locus_tag=LDO09_RS11655;product=cupin;protein_id=WP_014511217.1;transl_table=11 NZ_AP024927.1 RefSeq gene 183595 183972 . + . ID=gene-LDO09_RS11660;Name=LDO09_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11660;old_locus_tag=TthAA11_23040 NZ_AP024927.1 Protein Homology CDS 183595 183972 . + 0 ID=cds-WP_223969251.1;Parent=gene-LDO09_RS11660;Dbxref=Genbank:WP_223969251.1;Name=WP_223969251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631509.1;locus_tag=LDO09_RS11660;product=hypothetical protein;protein_id=WP_223969251.1;transl_table=11 NZ_AP024927.1 RefSeq gene 184016 185113 . + . ID=gene-LDO09_RS11665;Name=LDO09_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11665;old_locus_tag=TthAA11_23050 NZ_AP024927.1 Protein Homology CDS 184016 185113 . + 0 ID=cds-WP_223969253.1;Parent=gene-LDO09_RS11665;Dbxref=Genbank:WP_223969253.1;Name=WP_223969253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511219.1;locus_tag=LDO09_RS11665;product=YwiC-like family protein;protein_id=WP_223969253.1;transl_table=11 NZ_AP024927.1 RefSeq gene 185110 185310 . - . ID=gene-LDO09_RS11670;Name=LDO09_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11670;old_locus_tag=TthAA11_23060 NZ_AP024927.1 Protein Homology CDS 185110 185310 . - 0 ID=cds-WP_124105681.1;Parent=gene-LDO09_RS11670;Dbxref=Genbank:WP_124105681.1;Name=WP_124105681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174474.1;locus_tag=LDO09_RS11670;product=hypothetical protein;protein_id=WP_124105681.1;transl_table=11 NZ_AP024927.1 RefSeq pseudogene 185318 185668 . + . ID=gene-LDO09_RS11675;Name=LDO09_RS11675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS11675;old_locus_tag=TthAA11_23070;partial=true;pseudo=true;start_range=.,185318 NZ_AP024927.1 Protein Homology CDS 185318 185668 . + 0 ID=cds-LDO09_RS11675;Parent=gene-LDO09_RS11675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511223.1;locus_tag=LDO09_RS11675;partial=true;product=arsenate reductase (azurin) large subunit;pseudo=true;start_range=.,185318;transl_table=11 NZ_AP024927.1 RefSeq gene 185738 187129 . + . ID=gene-LDO09_RS11680;Name=LDO09_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11680;old_locus_tag=TthAA11_23080 NZ_AP024927.1 Protein Homology CDS 185738 187129 . + 0 ID=cds-WP_038028412.1;Parent=gene-LDO09_RS11680;Dbxref=Genbank:WP_038028412.1;Name=WP_038028412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174476.1;locus_tag=LDO09_RS11680;product=replication initiator protein A;protein_id=WP_038028412.1;transl_table=11 NZ_AP024927.1 RefSeq gene 187639 188607 . + . ID=gene-LDO09_RS11685;Name=LDO09_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11685;old_locus_tag=TthAA11_23090 NZ_AP024927.1 Protein Homology CDS 187639 188607 . + 0 ID=cds-WP_011174477.1;Parent=gene-LDO09_RS11685;Dbxref=Genbank:WP_011174477.1;Name=WP_011174477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631501.1;locus_tag=LDO09_RS11685;product=AAA family ATPase;protein_id=WP_011174477.1;transl_table=11 NZ_AP024927.1 RefSeq gene 188604 189497 . + . ID=gene-LDO09_RS11690;Name=LDO09_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11690;old_locus_tag=TthAA11_23100 NZ_AP024927.1 Protein Homology CDS 188604 189497 . + 0 ID=cds-WP_223969255.1;Parent=gene-LDO09_RS11690;Dbxref=Genbank:WP_223969255.1;Name=WP_223969255.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174478.1;locus_tag=LDO09_RS11690;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_223969255.1;transl_table=11 NZ_AP024927.1 RefSeq gene 189706 190524 . + . ID=gene-LDO09_RS11695;Name=LDO09_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11695;old_locus_tag=TthAA11_23110 NZ_AP024927.1 GeneMarkS-2+ CDS 189706 190524 . + 0 ID=cds-WP_014630581.1;Parent=gene-LDO09_RS11695;Dbxref=Genbank:WP_014630581.1;Name=WP_014630581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11695;product=hypothetical protein;protein_id=WP_014630581.1;transl_table=11 NZ_AP024927.1 RefSeq pseudogene 190787 191074 . + . ID=gene-LDO09_RS11700;Name=LDO09_RS11700;end_range=191074,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO09_RS11700;old_locus_tag=TthAA11_23120;partial=true;pseudo=true;start_range=.,190787 NZ_AP024927.1 Protein Homology CDS 190787 191074 . + 0 ID=cds-LDO09_RS11700;Parent=gene-LDO09_RS11700;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=191074,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229174.1;locus_tag=LDO09_RS11700;partial=true;product=chromosome partitioning protein ParB;pseudo=true;start_range=.,190787;transl_table=11 NZ_AP024927.1 RefSeq gene 191221 191391 . + . ID=gene-LDO09_RS11705;Name=LDO09_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11705;old_locus_tag=TthAA11_23130 NZ_AP024927.1 GeneMarkS-2+ CDS 191221 191391 . + 0 ID=cds-WP_172619246.1;Parent=gene-LDO09_RS11705;Dbxref=Genbank:WP_172619246.1;Name=WP_172619246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11705;product=hypothetical protein;protein_id=WP_172619246.1;transl_table=11 NZ_AP024927.1 RefSeq gene 191388 191681 . + . ID=gene-LDO09_RS11710;Name=LDO09_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11710;old_locus_tag=TthAA11_23140 NZ_AP024927.1 Protein Homology CDS 191388 191681 . + 0 ID=cds-WP_223969258.1;Parent=gene-LDO09_RS11710;Dbxref=Genbank:WP_223969258.1;Name=WP_223969258.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012464.2;locus_tag=LDO09_RS11710;product=recombinase family protein;protein_id=WP_223969258.1;transl_table=11 NZ_AP024927.1 RefSeq gene 191672 192937 . + . ID=gene-LDO09_RS11715;Name=LDO09_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11715;old_locus_tag=TthAA11_23150 NZ_AP024927.1 Protein Homology CDS 191672 192937 . + 0 ID=cds-WP_223969260.1;Parent=gene-LDO09_RS11715;Dbxref=Genbank:WP_223969260.1;Name=WP_223969260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630580.1;locus_tag=LDO09_RS11715;product=RNA-guided endonuclease TnpB family protein;protein_id=WP_223969260.1;transl_table=11 NZ_AP024927.1 RefSeq gene 193167 194768 . + . ID=gene-LDO09_RS11720;Name=LDO09_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11720;old_locus_tag=TthAA11_23160 NZ_AP024927.1 Protein Homology CDS 193167 194768 . + 0 ID=cds-WP_223969262.1;Parent=gene-LDO09_RS11720;Dbxref=Genbank:WP_223969262.1;Name=WP_223969262.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630579.1;locus_tag=LDO09_RS11720;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223969262.1;transl_table=11 NZ_AP024927.1 RefSeq gene 194765 194908 . + . ID=gene-LDO09_RS11725;Name=LDO09_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11725;old_locus_tag=TthAA11_23170 NZ_AP024927.1 Protein Homology CDS 194765 194908 . + 0 ID=cds-WP_165739689.1;Parent=gene-LDO09_RS11725;Dbxref=Genbank:WP_165739689.1;Name=WP_165739689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174487.1;locus_tag=LDO09_RS11725;product=hypothetical protein;protein_id=WP_165739689.1;transl_table=11 NZ_AP024927.1 RefSeq gene 195040 196470 . + . ID=gene-LDO09_RS11730;Name=LDO09_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11730;old_locus_tag=TthAA11_23180 NZ_AP024927.1 Protein Homology CDS 195040 196470 . + 0 ID=cds-WP_223969264.1;Parent=gene-LDO09_RS11730;Dbxref=Genbank:WP_223969264.1;Name=WP_223969264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174488.1;locus_tag=LDO09_RS11730;product=alpha-galactosidase;protein_id=WP_223969264.1;transl_table=11 NZ_AP024927.1 RefSeq gene 196454 197503 . + . ID=gene-LDO09_RS11735;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=LDO09_RS11735;old_locus_tag=TthAA11_23190 NZ_AP024927.1 Protein Homology CDS 196454 197503 . + 0 ID=cds-WP_011174489.1;Parent=gene-LDO09_RS11735;Dbxref=Genbank:WP_011174489.1;Name=WP_011174489.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174489.1;locus_tag=LDO09_RS11735;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_011174489.1;transl_table=11 NZ_AP024927.1 RefSeq gene 197583 198371 . + . ID=gene-LDO09_RS11740;Name=LDO09_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11740;old_locus_tag=TthAA11_23200 NZ_AP024927.1 Protein Homology CDS 197583 198371 . + 0 ID=cds-WP_143587263.1;Parent=gene-LDO09_RS11740;Dbxref=Genbank:WP_143587263.1;Name=WP_143587263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229185.1;locus_tag=LDO09_RS11740;product=tryptophan-rich sensory protein;protein_id=WP_143587263.1;transl_table=11 NZ_AP024927.1 RefSeq gene 198368 198811 . + . ID=gene-LDO09_RS11745;Name=LDO09_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11745;old_locus_tag=TthAA11_23210 NZ_AP024927.1 Protein Homology CDS 198368 198811 . + 0 ID=cds-WP_223966807.1;Parent=gene-LDO09_RS11745;Dbxref=Genbank:WP_223966807.1;Name=WP_223966807.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016356.2;locus_tag=LDO09_RS11745;product=DUF523 domain-containing protein;protein_id=WP_223966807.1;transl_table=11 NZ_AP024927.1 RefSeq gene 198929 200536 . + . ID=gene-LDO09_RS11750;Name=LDO09_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11750;old_locus_tag=TthAA11_23220 NZ_AP024927.1 Protein Homology CDS 198929 200536 . + 0 ID=cds-WP_223969266.1;Parent=gene-LDO09_RS11750;Dbxref=Genbank:WP_223969266.1;Name=WP_223969266.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172891.1;locus_tag=LDO09_RS11750;product=IS200/IS605 family accessory protein TnpB-related protein;protein_id=WP_223969266.1;transl_table=11 NZ_AP024927.1 RefSeq gene 200520 201065 . + . ID=gene-LDO09_RS11755;Name=LDO09_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11755;old_locus_tag=TthAA11_23230 NZ_AP024927.1 Protein Homology CDS 200520 201065 . + 0 ID=cds-WP_223966987.1;Parent=gene-LDO09_RS11755;Dbxref=Genbank:WP_223966987.1;Name=WP_223966987.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019948.2;locus_tag=LDO09_RS11755;product=YbgA family protein;protein_id=WP_223966987.1;transl_table=11 NZ_AP024927.1 RefSeq gene 201096 201488 . - . ID=gene-LDO09_RS11760;Name=LDO09_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11760;old_locus_tag=TthAA11_23240 NZ_AP024927.1 Protein Homology CDS 201096 201488 . - 0 ID=cds-WP_011174492.1;Parent=gene-LDO09_RS11760;Dbxref=Genbank:WP_011174492.1;Name=WP_011174492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511244.1;locus_tag=LDO09_RS11760;product=nucleotidyltransferase domain-containing protein;protein_id=WP_011174492.1;transl_table=11 NZ_AP024927.1 RefSeq gene 201498 202496 . - . ID=gene-LDO09_RS11765;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=LDO09_RS11765;old_locus_tag=TthAA11_23250 NZ_AP024927.1 Protein Homology CDS 201498 202496 . - 0 ID=cds-WP_223969268.1;Parent=gene-LDO09_RS11765;Dbxref=Genbank:WP_223969268.1;Name=WP_223969268.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511245.1;locus_tag=LDO09_RS11765;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_223969268.1;transl_table=11 NZ_AP024927.1 RefSeq gene 202493 204061 . - . ID=gene-LDO09_RS11770;Name=crtI;gbkey=Gene;gene=crtI;gene_biotype=protein_coding;locus_tag=LDO09_RS11770;old_locus_tag=TthAA11_23260 NZ_AP024927.1 Protein Homology CDS 202493 204061 . - 0 ID=cds-WP_223966982.1;Parent=gene-LDO09_RS11770;Dbxref=Genbank:WP_223966982.1;Name=WP_223966982.1;Ontology_term=GO:0016117,GO:0016166;gbkey=CDS;gene=crtI;go_function=phytoene dehydrogenase activity|0016166||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008631494.1;locus_tag=LDO09_RS11770;product=phytoene desaturase family protein;protein_id=WP_223966982.1;transl_table=11 NZ_AP024927.1 RefSeq gene 204159 204551 . - . ID=gene-LDO09_RS11775;Name=LDO09_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11775;old_locus_tag=TthAA11_23270 NZ_AP024927.1 Protein Homology CDS 204159 204551 . - 0 ID=cds-WP_008631493.1;Parent=gene-LDO09_RS11775;Dbxref=Genbank:WP_008631493.1;Name=WP_008631493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229189.1;locus_tag=LDO09_RS11775;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_008631493.1;transl_table=11 NZ_AP024927.1 RefSeq gene 204572 204832 . - . ID=gene-LDO09_RS11780;Name=LDO09_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11780;old_locus_tag=TthAA11_23280 NZ_AP024927.1 Protein Homology CDS 204572 204832 . - 0 ID=cds-WP_011229190.1;Parent=gene-LDO09_RS11780;Dbxref=Genbank:WP_011229190.1;Name=WP_011229190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630570.1;locus_tag=LDO09_RS11780;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_011229190.1;transl_table=11 NZ_AP024927.1 RefSeq gene 204886 205908 . - . ID=gene-LDO09_RS11785;Name=LDO09_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11785;old_locus_tag=TthAA11_23290 NZ_AP024927.1 Protein Homology CDS 204886 205908 . - 0 ID=cds-WP_143587272.1;Parent=gene-LDO09_RS11785;Dbxref=Genbank:WP_143587272.1;Name=WP_143587272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630569.1;locus_tag=LDO09_RS11785;product=glycosyltransferase;protein_id=WP_143587272.1;transl_table=11 NZ_AP024927.1 RefSeq gene 205905 206582 . - . ID=gene-LDO09_RS11790;Name=LDO09_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11790;old_locus_tag=TthAA11_23300 NZ_AP024927.1 Protein Homology CDS 205905 206582 . - 0 ID=cds-WP_223969271.1;Parent=gene-LDO09_RS11790;Dbxref=Genbank:WP_223969271.1;Name=WP_223969271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174498.1;locus_tag=LDO09_RS11790;product=lysophospholipid acyltransferase family protein;protein_id=WP_223969271.1;transl_table=11 NZ_AP024927.1 RefSeq gene 206587 207285 . - . ID=gene-LDO09_RS11795;Name=LDO09_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11795;old_locus_tag=TthAA11_23310 NZ_AP024927.1 Protein Homology CDS 206587 207285 . - 0 ID=cds-WP_223969273.1;Parent=gene-LDO09_RS11795;Dbxref=Genbank:WP_223969273.1;Name=WP_223969273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630567.1;locus_tag=LDO09_RS11795;product=lycopene cyclase domain-containing protein;protein_id=WP_223969273.1;transl_table=11 NZ_AP024927.1 RefSeq gene 207282 208451 . - . ID=gene-LDO09_RS11800;Name=LDO09_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11800;old_locus_tag=TthAA11_23320 NZ_AP024927.1 Protein Homology CDS 207282 208451 . - 0 ID=cds-WP_011229191.1;Parent=gene-LDO09_RS11800;Dbxref=Genbank:WP_011229191.1;Name=WP_011229191.1;Ontology_term=GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229191.1;locus_tag=LDO09_RS11800;product=cytochrome P450;protein_id=WP_011229191.1;transl_table=11 NZ_AP024927.1 RefSeq gene 208637 209899 . - . ID=gene-LDO09_RS11805;Name=phr;gbkey=Gene;gene=phr;gene_biotype=protein_coding;locus_tag=LDO09_RS11805;old_locus_tag=TthAA11_23330 NZ_AP024927.1 Protein Homology CDS 208637 209899 . - 0 ID=cds-WP_143587280.1;Parent=gene-LDO09_RS11805;Dbxref=Genbank:WP_143587280.1;Name=WP_143587280.1;gbkey=CDS;gene=phr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229192.1;locus_tag=LDO09_RS11805;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_143587280.1;transl_table=11 NZ_AP024927.1 RefSeq gene 209899 210750 . - . ID=gene-LDO09_RS11810;Name=LDO09_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11810;old_locus_tag=TthAA11_23340 NZ_AP024927.1 Protein Homology CDS 209899 210750 . - 0 ID=cds-WP_172619247.1;Parent=gene-LDO09_RS11810;Dbxref=Genbank:WP_172619247.1;Name=WP_172619247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630564.1;locus_tag=LDO09_RS11810;product=phytoene/squalene synthase family protein;protein_id=WP_172619247.1;transl_table=11 NZ_AP024927.1 RefSeq gene 210860 211717 . + . ID=gene-LDO09_RS11815;Name=carH;gbkey=Gene;gene=carH;gene_biotype=protein_coding;locus_tag=LDO09_RS11815;old_locus_tag=TthAA11_23350 NZ_AP024927.1 Protein Homology CDS 210860 211717 . + 0 ID=cds-WP_223969275.1;Parent=gene-LDO09_RS11815;Dbxref=Genbank:WP_223969275.1;Name=WP_223969275.1;gbkey=CDS;gene=carH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229194.1;locus_tag=LDO09_RS11815;product=HTH-type transcriptional repressor CarH;protein_id=WP_223969275.1;transl_table=11 NZ_AP024927.1 RefSeq gene 211714 212301 . + . ID=gene-LDO09_RS11820;Name=ldrP;gbkey=Gene;gene=ldrP;gene_biotype=protein_coding;locus_tag=LDO09_RS11820;old_locus_tag=TthAA11_23360 NZ_AP024927.1 Protein Homology CDS 211714 212301 . + 0 ID=cds-WP_143587286.1;Parent=gene-LDO09_RS11820;Dbxref=Genbank:WP_143587286.1;Name=WP_143587286.1;gbkey=CDS;gene=ldrP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174504.1;locus_tag=LDO09_RS11820;product=transcriptional regulator LdrP;protein_id=WP_143587286.1;transl_table=11 NZ_AP024927.1 RefSeq gene 212302 213165 . + . ID=gene-LDO09_RS11825;Name=LDO09_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11825;old_locus_tag=TthAA11_23370 NZ_AP024927.1 Protein Homology CDS 212302 213165 . + 0 ID=cds-WP_143587288.1;Parent=gene-LDO09_RS11825;Dbxref=Genbank:WP_143587288.1;Name=WP_143587288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229196.1;locus_tag=LDO09_RS11825;product=complex I NDUFA9 subunit family protein;protein_id=WP_143587288.1;transl_table=11 NZ_AP024927.1 RefSeq gene 213208 213426 . + . ID=gene-LDO09_RS11830;Name=LDO09_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11830;old_locus_tag=TthAA11_23380 NZ_AP024927.1 Protein Homology CDS 213208 213426 . + 0 ID=cds-WP_172596997.1;Parent=gene-LDO09_RS11830;Dbxref=Genbank:WP_172596997.1;Name=WP_172596997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003044896.1;locus_tag=LDO09_RS11830;product=DUF4926 domain-containing protein;protein_id=WP_172596997.1;transl_table=11 NZ_AP024927.1 RefSeq gene 213654 214571 . + . ID=gene-LDO09_RS11835;Name=LDO09_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11835;old_locus_tag=TthAA11_23390 NZ_AP024927.1 Protein Homology CDS 213654 214571 . + 0 ID=cds-WP_223969278.1;Parent=gene-LDO09_RS11835;Dbxref=Genbank:WP_223969278.1;Name=WP_223969278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174516.1;locus_tag=LDO09_RS11835;product=MBL fold metallo-hydrolase;protein_id=WP_223969278.1;transl_table=11 NZ_AP024927.1 RefSeq gene 214657 215967 . - . ID=gene-LDO09_RS11840;Name=LDO09_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11840;old_locus_tag=TthAA11_23400 NZ_AP024927.1 Protein Homology CDS 214657 215967 . - 0 ID=cds-WP_014511259.1;Parent=gene-LDO09_RS11840;Dbxref=Genbank:WP_014511259.1;Name=WP_014511259.1;Ontology_term=GO:0030245,GO:0008422;gbkey=CDS;go_function=beta-glucosidase activity|0008422||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511259.1;locus_tag=LDO09_RS11840;product=GH1 family beta-glucosidase;protein_id=WP_014511259.1;transl_table=11 NZ_AP024927.1 RefSeq gene 215989 216846 . - . ID=gene-LDO09_RS11845;Name=LDO09_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11845;old_locus_tag=TthAA11_23410 NZ_AP024927.1 Protein Homology CDS 215989 216846 . - 0 ID=cds-WP_207776817.1;Parent=gene-LDO09_RS11845;Dbxref=Genbank:WP_207776817.1;Name=WP_207776817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630557.1;locus_tag=LDO09_RS11845;product=carbohydrate ABC transporter permease;protein_id=WP_207776817.1;transl_table=11 NZ_AP024927.1 RefSeq gene 216850 217770 . - . ID=gene-LDO09_RS11850;Name=LDO09_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11850;old_locus_tag=TthAA11_23420 NZ_AP024927.1 Protein Homology CDS 216850 217770 . - 0 ID=cds-WP_014511261.1;Parent=gene-LDO09_RS11850;Dbxref=Genbank:WP_014511261.1;Name=WP_014511261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630556.1;locus_tag=LDO09_RS11850;product=sugar ABC transporter permease;protein_id=WP_014511261.1;transl_table=11 NZ_AP024927.1 RefSeq gene 217810 219114 . - . ID=gene-LDO09_RS11855;Name=LDO09_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11855;old_locus_tag=TthAA11_23430 NZ_AP024927.1 Protein Homology CDS 217810 219114 . - 0 ID=cds-WP_223969280.1;Parent=gene-LDO09_RS11855;Dbxref=Genbank:WP_223969280.1;Name=WP_223969280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630555.1;locus_tag=LDO09_RS11855;product=sugar ABC transporter substrate-binding protein;protein_id=WP_223969280.1;transl_table=11 NZ_AP024927.1 RefSeq gene 219190 220182 . - . ID=gene-LDO09_RS11860;Name=LDO09_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11860;old_locus_tag=TthAA11_23440 NZ_AP024927.1 Protein Homology CDS 219190 220182 . - 0 ID=cds-WP_223969282.1;Parent=gene-LDO09_RS11860;Dbxref=Genbank:WP_223969282.1;Name=WP_223969282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011229210.1;locus_tag=LDO09_RS11860;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_223969282.1;transl_table=11 NZ_AP024927.1 RefSeq gene 220401 221129 . - . ID=gene-LDO09_RS11865;Name=LDO09_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11865;old_locus_tag=TthAA11_23450 NZ_AP024927.1 Protein Homology CDS 220401 221129 . - 0 ID=cds-WP_223969284.1;Parent=gene-LDO09_RS11865;Dbxref=Genbank:WP_223969284.1;Name=WP_223969284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015065377.1;locus_tag=LDO09_RS11865;product=SDR family oxidoreductase;protein_id=WP_223969284.1;transl_table=11 NZ_AP024927.1 RefSeq gene 221126 222409 . - . ID=gene-LDO09_RS11870;Name=LDO09_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11870;old_locus_tag=TthAA11_23460 NZ_AP024927.1 Protein Homology CDS 221126 222409 . - 0 ID=cds-WP_143587297.1;Parent=gene-LDO09_RS11870;Dbxref=Genbank:WP_143587297.1;Name=WP_143587297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630549.1;locus_tag=LDO09_RS11870;product=TRAP transporter large permease;protein_id=WP_143587297.1;transl_table=11 NZ_AP024927.1 RefSeq gene 222412 222873 . - . ID=gene-LDO09_RS11875;Name=LDO09_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11875;old_locus_tag=TthAA11_23470 NZ_AP024927.1 Protein Homology CDS 222412 222873 . - 0 ID=cds-WP_143587299.1;Parent=gene-LDO09_RS11875;Dbxref=Genbank:WP_143587299.1;Name=WP_143587299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174527.1;locus_tag=LDO09_RS11875;product=TRAP transporter small permease;protein_id=WP_143587299.1;transl_table=11 NZ_AP024927.1 RefSeq gene 222915 223601 . - . ID=gene-LDO09_RS11880;Name=LDO09_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11880;old_locus_tag=TthAA11_23480 NZ_AP024927.1 Protein Homology CDS 222915 223601 . - 0 ID=cds-WP_011174528.1;Parent=gene-LDO09_RS11880;Dbxref=Genbank:WP_011174528.1;Name=WP_011174528.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015445.2;locus_tag=LDO09_RS11880;product=C4-dicarboxylate TRAP transporter substrate-binding protein;protein_id=WP_011174528.1;transl_table=11 NZ_AP024927.1 RefSeq gene 223598 224116 . - . ID=gene-LDO09_RS11885;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;locus_tag=LDO09_RS11885;old_locus_tag=TthAA11_23490 NZ_AP024927.1 Protein Homology CDS 223598 224116 . - 0 ID=cds-WP_223969286.1;Parent=gene-LDO09_RS11885;Dbxref=Genbank:WP_223969286.1;Name=WP_223969286.1;Ontology_term=GO:0009084,GO:0009255,GO:0008675,GO:0008700;gbkey=CDS;gene=eda;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA,4-hydroxy-2-oxoglutarate aldolase activity|0008700||IEA;go_process=glutamine family amino acid biosynthetic process|0009084||IEA,Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174529.1;locus_tag=LDO09_RS11885;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_223969286.1;transl_table=11 NZ_AP024927.1 RefSeq gene 224124 224381 . + . ID=gene-LDO09_RS11890;Name=LDO09_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11890;old_locus_tag=TthAA11_23500 NZ_AP024927.1 GeneMarkS-2+ CDS 224124 224381 . + 0 ID=cds-WP_143587303.1;Parent=gene-LDO09_RS11890;Dbxref=Genbank:WP_143587303.1;Name=WP_143587303.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11890;product=hypothetical protein;protein_id=WP_143587303.1;transl_table=11 NZ_AP024927.1 RefSeq gene 224420 225184 . + . ID=gene-LDO09_RS11895;Name=LDO09_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11895;old_locus_tag=TthAA11_23510 NZ_AP024927.1 Protein Homology CDS 224420 225184 . + 0 ID=cds-WP_143587305.1;Parent=gene-LDO09_RS11895;Dbxref=Genbank:WP_143587305.1;Name=WP_143587305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511273.1;locus_tag=LDO09_RS11895;product=sugar phosphate isomerase/epimerase;protein_id=WP_143587305.1;transl_table=11 NZ_AP024927.1 RefSeq gene 225194 225928 . + . ID=gene-LDO09_RS11900;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LDO09_RS11900;old_locus_tag=TthAA11_23520 NZ_AP024927.1 Protein Homology CDS 225194 225928 . + 0 ID=cds-WP_143587307.1;Parent=gene-LDO09_RS11900;Dbxref=Genbank:WP_143587307.1;Name=WP_143587307.1;Ontology_term=GO:0006950,GO:0008253,GO:0008254;gbkey=CDS;gene=surE;go_function=5'-nucleotidase activity|0008253||IEA,3'-nucleotidase activity|0008254||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511274.1;locus_tag=LDO09_RS11900;product=5'/3'-nucleotidase SurE;protein_id=WP_143587307.1;transl_table=11 NZ_AP024927.1 RefSeq gene 226007 226408 . - . ID=gene-LDO09_RS11905;Name=LDO09_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11905;old_locus_tag=TthAA11_23530 NZ_AP024927.1 Protein Homology CDS 226007 226408 . - 0 ID=cds-WP_008631445.1;Parent=gene-LDO09_RS11905;Dbxref=Genbank:WP_008631445.1;Name=WP_008631445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014630543.1;locus_tag=LDO09_RS11905;product=SaoD/DsrE family protein;protein_id=WP_008631445.1;transl_table=11 NZ_AP024927.1 RefSeq gene 226585 228642 . + . ID=gene-LDO09_RS10620;Name=LDO09_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS10620 NZ_AP024927.1 Protein Homology CDS 226585 228642 . + 0 ID=cds-WP_223969288.1;Parent=gene-LDO09_RS10620;Dbxref=Genbank:WP_223969288.1;Name=WP_223969288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511275.1;locus_tag=LDO09_RS10620;product=argonaute PAZ domain-containing protein;protein_id=WP_223969288.1;transl_table=11 ##sequence-region NZ_AP024928.1 1 19112 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=274 NZ_AP024928.1 RefSeq region 1 19112 . + . ID=NZ_AP024928.1:1..19112;Dbxref=taxon:274;Is_circular=true;Name=pAA1-1c;collected-by=Natsuki Tomariguchi;collection-date=2017-03-20;country=Japan:Arima Hot Spring;gbkey=Src;genome=plasmid;isolation-source=hot spring water;mol_type=genomic DNA;plasmid-name=pAA1-1c;strain=AA1-1 NZ_AP024928.1 RefSeq gene 1551 2759 . + . ID=gene-LDO09_RS11915;Name=LDO09_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11915;old_locus_tag=TthAA11_23540 NZ_AP024928.1 Protein Homology CDS 1551 2759 . + 0 ID=cds-WP_223969412.1;Parent=gene-LDO09_RS11915;Dbxref=Genbank:WP_223969412.1;Name=WP_223969412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461193.1;locus_tag=LDO09_RS11915;product=helix-turn-helix domain-containing protein;protein_id=WP_223969412.1;transl_table=11 NZ_AP024928.1 RefSeq gene 2812 3549 . + . ID=gene-LDO09_RS11920;Name=LDO09_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11920;old_locus_tag=TthAA11_23550 NZ_AP024928.1 Protein Homology CDS 2812 3549 . + 0 ID=cds-WP_223969414.1;Parent=gene-LDO09_RS11920;Dbxref=Genbank:WP_223969414.1;Name=WP_223969414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014271895.1;locus_tag=LDO09_RS11920;product=PD-(D/E)XK nuclease family protein;protein_id=WP_223969414.1;transl_table=11 NZ_AP024928.1 RefSeq gene 3536 4516 . - . ID=gene-LDO09_RS11925;Name=LDO09_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11925;old_locus_tag=TthAA11_23560 NZ_AP024928.1 Protein Homology CDS 3536 4516 . - 0 ID=cds-WP_223969416.1;Parent=gene-LDO09_RS11925;Dbxref=Genbank:WP_223969416.1;Name=WP_223969416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461195.1;locus_tag=LDO09_RS11925;product=hypothetical protein;protein_id=WP_223969416.1;transl_table=11 NZ_AP024928.1 RefSeq gene 4525 4821 . - . ID=gene-LDO09_RS11930;Name=LDO09_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11930;old_locus_tag=TthAA11_23570 NZ_AP024928.1 Protein Homology CDS 4525 4821 . - 0 ID=cds-WP_223969418.1;Parent=gene-LDO09_RS11930;Dbxref=Genbank:WP_223969418.1;Name=WP_223969418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014271893.1;locus_tag=LDO09_RS11930;product=helix-turn-helix domain-containing protein;protein_id=WP_223969418.1;transl_table=11 NZ_AP024928.1 RefSeq gene 5144 6094 . + . ID=gene-LDO09_RS11935;Name=LDO09_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11935;old_locus_tag=TthAA11_23580 NZ_AP024928.1 Protein Homology CDS 5144 6094 . + 0 ID=cds-WP_223969420.1;Parent=gene-LDO09_RS11935;Dbxref=Genbank:WP_223969420.1;Name=WP_223969420.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461196.1;locus_tag=LDO09_RS11935;product=tyrosine-type recombinase/integrase;protein_id=WP_223969420.1;transl_table=11 NZ_AP024928.1 RefSeq gene 6086 6793 . - . ID=gene-LDO09_RS11940;Name=LDO09_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11940 NZ_AP024928.1 Protein Homology CDS 6086 6793 . - 0 ID=cds-WP_223969422.1;Parent=gene-LDO09_RS11940;Dbxref=Genbank:WP_223969422.1;Name=WP_223969422.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012933.2;locus_tag=LDO09_RS11940;product=hypothetical protein;protein_id=WP_223969422.1;transl_table=11 NZ_AP024928.1 RefSeq gene 6765 8141 . - . ID=gene-LDO09_RS11945;Name=LDO09_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11945;old_locus_tag=TthAA11_23590 NZ_AP024928.1 Protein Homology CDS 6765 8141 . - 0 ID=cds-WP_223969423.1;Parent=gene-LDO09_RS11945;Dbxref=Genbank:WP_223969423.1;Name=WP_223969423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012349797.1;locus_tag=LDO09_RS11945;product=DNA cytosine methyltransferase;protein_id=WP_223969423.1;transl_table=11 NZ_AP024928.1 RefSeq gene 8141 9286 . - . ID=gene-LDO09_RS11950;Name=LDO09_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11950;old_locus_tag=TthAA11_23600 NZ_AP024928.1 GeneMarkS-2+ CDS 8141 9286 . - 0 ID=cds-WP_223969425.1;Parent=gene-LDO09_RS11950;Dbxref=Genbank:WP_223969425.1;Name=WP_223969425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS11950;product=hypothetical protein;protein_id=WP_223969425.1;transl_table=11 NZ_AP024928.1 RefSeq gene 9288 9662 . - . ID=gene-LDO09_RS11955;Name=LDO09_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11955;old_locus_tag=TthAA11_23610 NZ_AP024928.1 Protein Homology CDS 9288 9662 . - 0 ID=cds-WP_223969428.1;Parent=gene-LDO09_RS11955;Dbxref=Genbank:WP_223969428.1;Name=WP_223969428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461174.1;locus_tag=LDO09_RS11955;product=ATPase;protein_id=WP_223969428.1;transl_table=11 NZ_AP024928.1 RefSeq gene 9659 10303 . - . ID=gene-LDO09_RS11960;Name=LDO09_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11960 NZ_AP024928.1 Protein Homology CDS 9659 10303 . - 0 ID=cds-WP_223969395.1;Parent=gene-LDO09_RS11960;Dbxref=Genbank:WP_223969395.1;Name=WP_223969395.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013793.2;locus_tag=LDO09_RS11960;product=ParA family protein;protein_id=WP_223969395.1;transl_table=11 NZ_AP024928.1 RefSeq gene 10300 10512 . - . ID=gene-LDO09_RS11965;Name=LDO09_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11965;old_locus_tag=TthAA11_23620 NZ_AP024928.1 Protein Homology CDS 10300 10512 . - 0 ID=cds-WP_223969397.1;Parent=gene-LDO09_RS11965;Dbxref=Genbank:WP_223969397.1;Name=WP_223969397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461176.1;locus_tag=LDO09_RS11965;product=helix-turn-helix domain-containing protein;protein_id=WP_223969397.1;transl_table=11 NZ_AP024928.1 RefSeq gene 10753 11142 . - . ID=gene-LDO09_RS11970;Name=LDO09_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11970;old_locus_tag=TthAA11_23630 NZ_AP024928.1 Protein Homology CDS 10753 11142 . - 0 ID=cds-WP_018461177.1;Parent=gene-LDO09_RS11970;Dbxref=Genbank:WP_018461177.1;Name=WP_018461177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011174373.1;locus_tag=LDO09_RS11970;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_018461177.1;transl_table=11 NZ_AP024928.1 RefSeq gene 11129 11356 . - . ID=gene-LDO09_RS11975;Name=LDO09_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11975;old_locus_tag=TthAA11_23640 NZ_AP024928.1 Protein Homology CDS 11129 11356 . - 0 ID=cds-WP_018461178.1;Parent=gene-LDO09_RS11975;Dbxref=Genbank:WP_018461178.1;Name=WP_018461178.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003048907.1;locus_tag=LDO09_RS11975;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_018461178.1;transl_table=11 NZ_AP024928.1 RefSeq gene 11539 12450 . + . ID=gene-LDO09_RS11980;Name=LDO09_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11980;old_locus_tag=TthAA11_23650 NZ_AP024928.1 Protein Homology CDS 11539 12450 . + 0 ID=cds-WP_223969399.1;Parent=gene-LDO09_RS11980;Dbxref=Genbank:WP_223969399.1;Name=WP_223969399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461179.1;locus_tag=LDO09_RS11980;product=ATP-binding protein;protein_id=WP_223969399.1;transl_table=11 NZ_AP024928.1 RefSeq gene 12459 12659 . + . ID=gene-LDO09_RS11985;Name=LDO09_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11985;old_locus_tag=TthAA11_23660 NZ_AP024928.1 Protein Homology CDS 12459 12659 . + 0 ID=cds-WP_018461180.1;Parent=gene-LDO09_RS11985;Dbxref=Genbank:WP_018461180.1;Name=WP_018461180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015717527.1;locus_tag=LDO09_RS11985;product=hypothetical protein;protein_id=WP_018461180.1;transl_table=11 NZ_AP024928.1 RefSeq gene 12659 12826 . + . ID=gene-LDO09_RS12175;Name=LDO09_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12175;old_locus_tag=TthAA11_23670 NZ_AP024928.1 Protein Homology CDS 12659 12826 . + 0 ID=cds-WP_018461181.1;Parent=gene-LDO09_RS12175;Dbxref=Genbank:WP_018461181.1;Name=WP_018461181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511350.1;locus_tag=LDO09_RS12175;product=hypothetical protein;protein_id=WP_018461181.1;transl_table=11 NZ_AP024928.1 RefSeq gene 12780 13490 . + . ID=gene-LDO09_RS11995;Name=LDO09_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS11995;old_locus_tag=TthAA11_23680 NZ_AP024928.1 Protein Homology CDS 12780 13490 . + 0 ID=cds-WP_267461205.1;Parent=gene-LDO09_RS11995;Dbxref=Genbank:WP_267461205.1;Name=WP_267461205.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461182.1;locus_tag=LDO09_RS11995;product=TolC family protein;protein_id=WP_267461205.1;transl_table=11 NZ_AP024928.1 RefSeq gene 13511 13960 . + . ID=gene-LDO09_RS12000;Name=LDO09_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12000;old_locus_tag=TthAA11_23690 NZ_AP024928.1 Protein Homology CDS 13511 13960 . + 0 ID=cds-WP_223969431.1;Parent=gene-LDO09_RS12000;Dbxref=Genbank:WP_223969431.1;Name=WP_223969431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461183.1;locus_tag=LDO09_RS12000;product=hypothetical protein;protein_id=WP_223969431.1;transl_table=11 NZ_AP024928.1 RefSeq gene 13957 14217 . + . ID=gene-LDO09_RS12005;Name=LDO09_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12005;old_locus_tag=TthAA11_23700 NZ_AP024928.1 Protein Homology CDS 13957 14217 . + 0 ID=cds-WP_018461184.1;Parent=gene-LDO09_RS12005;Dbxref=Genbank:WP_018461184.1;Name=WP_018461184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014271875.1;locus_tag=LDO09_RS12005;product=hypothetical protein;protein_id=WP_018461184.1;transl_table=11 NZ_AP024928.1 RefSeq gene 14214 15848 . + . ID=gene-LDO09_RS12010;Name=LDO09_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12010;old_locus_tag=TthAA11_23710 NZ_AP024928.1 Protein Homology CDS 14214 15848 . + 0 ID=cds-WP_223969401.1;Parent=gene-LDO09_RS12010;Dbxref=Genbank:WP_223969401.1;Name=WP_223969401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461185.1;locus_tag=LDO09_RS12010;product=metal-dependent hydrolase;protein_id=WP_223969401.1;transl_table=11 NZ_AP024928.1 RefSeq gene 15901 16587 . - . ID=gene-LDO09_RS12015;Name=LDO09_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12015;old_locus_tag=TthAA11_23720 NZ_AP024928.1 Protein Homology CDS 15901 16587 . - 0 ID=cds-WP_223969404.1;Parent=gene-LDO09_RS12015;Dbxref=Genbank:WP_223969404.1;Name=WP_223969404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014511127.1;locus_tag=LDO09_RS12015;product=thermonuclease family protein;protein_id=WP_223969404.1;transl_table=11 NZ_AP024928.1 RefSeq gene 16879 17355 . + . ID=gene-LDO09_RS12020;Name=LDO09_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12020;old_locus_tag=TthAA11_23730 NZ_AP024928.1 Protein Homology CDS 16879 17355 . + 0 ID=cds-WP_223969406.1;Parent=gene-LDO09_RS12020;Dbxref=Genbank:WP_223969406.1;Name=WP_223969406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461188.1;locus_tag=LDO09_RS12020;product=hypothetical protein;protein_id=WP_223969406.1;transl_table=11 NZ_AP024928.1 RefSeq gene 17460 17798 . + . ID=gene-LDO09_RS12025;Name=LDO09_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12025;old_locus_tag=TthAA11_23740 NZ_AP024928.1 Protein Homology CDS 17460 17798 . + 0 ID=cds-WP_223969408.1;Parent=gene-LDO09_RS12025;Dbxref=Genbank:WP_223969408.1;Name=WP_223969408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461189.1;locus_tag=LDO09_RS12025;product=hypothetical protein;protein_id=WP_223969408.1;transl_table=11 NZ_AP024928.1 RefSeq gene 17798 17932 . + . ID=gene-LDO09_RS12180;Name=LDO09_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12180;old_locus_tag=TthAA11_23750 NZ_AP024928.1 GeneMarkS-2+ CDS 17798 17932 . + 0 ID=cds-WP_255721588.1;Parent=gene-LDO09_RS12180;Dbxref=Genbank:WP_255721588.1;Name=WP_255721588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS12180;product=hypothetical protein;protein_id=WP_255721588.1;transl_table=11 NZ_AP024928.1 RefSeq gene 17982 18362 . + . ID=gene-LDO09_RS12030;Name=LDO09_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12030;old_locus_tag=TthAA11_23760 NZ_AP024928.1 Protein Homology CDS 17982 18362 . + 0 ID=cds-WP_117236591.1;Parent=gene-LDO09_RS12030;Dbxref=Genbank:WP_117236591.1;Name=WP_117236591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461190.1;locus_tag=LDO09_RS12030;product=hypothetical protein;protein_id=WP_117236591.1;transl_table=11 NZ_AP024928.1 RefSeq gene 18641 18934 . + . ID=gene-LDO09_RS12035;Name=LDO09_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12035;old_locus_tag=TthAA11_23770 NZ_AP024928.1 Protein Homology CDS 18641 18934 . + 0 ID=cds-WP_223969410.1;Parent=gene-LDO09_RS12035;Dbxref=Genbank:WP_223969410.1;Name=WP_223969410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018461191.1;locus_tag=LDO09_RS12035;product=helix-turn-helix domain-containing protein;protein_id=WP_223969410.1;transl_table=11 NZ_AP024928.1 RefSeq gene 18897 20165 . - . ID=gene-LDO09_RS12170;Name=LDO09_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO09_RS12170 NZ_AP024928.1 GeneMarkS-2+ CDS 18897 20165 . - 0 ID=cds-WP_267461206.1;Parent=gene-LDO09_RS12170;Dbxref=Genbank:WP_267461206.1;Name=WP_267461206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO09_RS12170;product=tetratricopeptide repeat protein;protein_id=WP_267461206.1;transl_table=11 ###