TT_RS00020	SM00740	TT_RS00020
TT_RS00060	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
TT_RS00100	SM00830	Chorismate mutase type II
TT_RS00125	SM00822	TT_RS00125
TT_RS00155	SM00829	Enoylreductase
TT_RS00170	SM00382	ATPases associated with a variety of cellular activities
TT_RS00175	SM00028	Tetratricopeptide repeats
TT_RS00185	SM00382	ATPases associated with a variety of cellular activities
TT_RS00195	SM00363	S4 RNA-binding domain
TT_RS00215	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TT_RS00220	SM00825	Beta-ketoacyl synthase
TT_RS00230	SM00822	TT_RS00230
TT_RS00235	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
TT_RS00255	SM00903	Flavin reductase like domain
TT_RS00260	SM00028	Tetratricopeptide repeats
TT_RS00315	SM00116	Domain in cystathionine beta-synthase and other proteins.
TT_RS00315	SM01240	TT_RS00315
TT_RS00335	SM00382	ATPases associated with a variety of cellular activities
TT_RS00335	SM00962	SRP54-type protein, GTPase domain
TT_RS00335	SM00963	SRP54-type protein, helical bundle domain
TT_RS00350	SM00382	ATPases associated with a variety of cellular activities
TT_RS00360	SM00393	Putative single-stranded nucleic acids-binding domain
TT_RS00370	SM01234	TT_RS00370
TT_RS00385	SM00382	ATPases associated with a variety of cellular activities
TT_RS00410	SM00382	ATPases associated with a variety of cellular activities
TT_RS00415	SM00382	ATPases associated with a variety of cellular activities
TT_RS00485	SM00829	Enoylreductase
TT_RS00505	SM00382	ATPases associated with a variety of cellular activities
TT_RS00510	SM00382	ATPases associated with a variety of cellular activities
TT_RS00515	SM00116	Domain in cystathionine beta-synthase and other proteins.
TT_RS00535	SM00642	Alpha-amylase domain
TT_RS00635	SM00729	Elongator protein 3, MiaB family, Radical SAM
TT_RS00675	SM00346	helix_turn_helix isocitrate lyase regulation
TT_RS00680	SM00422	helix_turn_helix, mercury resistance
TT_RS00710	SM01001	AIR carboxylase
TT_RS00740	SM00919	Malic enzyme, NAD binding domain
TT_RS00740	SM01274	TT_RS00740
TT_RS00775	SM00450	Rhodanese Homology Domain
TT_RS00790	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
TT_RS00800	SM00421	helix_turn_helix, Lux Regulon
TT_RS00800	SM00448	cheY-homologous receiver domain
TT_RS00805	SM00387	Histidine kinase-like ATPases
TT_RS00810	SM00904	Riboflavin kinase
TT_RS00860	SM00881	CoA binding domain
TT_RS00880	SM00382	ATPases associated with a variety of cellular activities
TT_RS00885	SM00382	ATPases associated with a variety of cellular activities
TT_RS00885	SM01086	C-terminal, D2-small domain, of ClpB protein
TT_RS00900	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TT_RS00905	SM00363	S4 RNA-binding domain
TT_RS00950	SM01207	TT_RS00950
TT_RS01020	SM00829	Enoylreductase
TT_RS01045	SM00479	TT_RS01045
TT_RS01070	SM00382	ATPases associated with a variety of cellular activities
TT_RS01105	SM00382	ATPases associated with a variety of cellular activities
TT_RS01110	SM00382	ATPases associated with a variety of cellular activities
TT_RS01190	SM00822	TT_RS01190
TT_RS01225	SM00729	Elongator protein 3, MiaB family, Radical SAM
TT_RS01225	SM00876	Biotin and Thiamin Synthesis associated domain
TT_RS01250	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
TT_RS01280	SM00382	ATPases associated with a variety of cellular activities
TT_RS01280	SM00994	ClpX C4-type zinc finger
TT_RS01280	SM01086	C-terminal, D2-small domain, of ClpB protein
TT_RS01290	SM01018	B12 binding domain
TT_RS01325	SM00854	Bacterial capsule synthesis protein PGA_cap
TT_RS01360	SM00028	Tetratricopeptide repeats
TT_RS01365	SM00382	ATPases associated with a variety of cellular activities
TT_RS01365	SM01086	C-terminal, D2-small domain, of ClpB protein
TT_RS01380	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
TT_RS01400	SM00327	von Willebrand factor (vWF) type A domain
TT_RS01470	SM00984	UDP binding domain
TT_RS01510	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TT_RS01535	SM00822	TT_RS01535
TT_RS01555	SM00829	Enoylreductase
TT_RS01685	SM00822	TT_RS01685
TT_RS01700	SM00382	ATPases associated with a variety of cellular activities
TT_RS01705	SM00382	ATPases associated with a variety of cellular activities
TT_RS01750	SM00028	Tetratricopeptide repeats
TT_RS01775	SM00316	Ribosomal protein S1-like RNA-binding domain
TT_RS01775	SM00322	K homology RNA-binding domain
TT_RS01785	SM00257	Lysin motif
TT_RS01795	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TT_RS01840	SM00382	ATPases associated with a variety of cellular activities
TT_RS01855	SM00986	Uracil DNA glycosylase superfamily
TT_RS01855	SM00987	UreE urease accessory protein, C-terminal domain 
TT_RS01935	SM00347	helix_turn_helix multiple antibiotic resistance protein
TT_RS01940	SM00116	Domain in cystathionine beta-synthase and other proteins.
TT_RS01940	SM01091	Transporter associated domain
TT_RS01955	SM01130	TT_RS01955
TT_RS01970	SM00387	Histidine kinase-like ATPases
TT_RS01970	SM00388	His Kinase A (phosphoacceptor) domain
TT_RS01975	SM00838	Elongation factor G C-terminus
TT_RS01990	SM00382	ATPases associated with a variety of cellular activities
TT_RS02000	SM00822	TT_RS02000
TT_RS02020	SM00529	Helix-turn-helix diphteria tox regulatory element
TT_RS02020	SM00899	TT_RS02020
TT_RS02040	SM00267	diguanylate cyclase
TT_RS02090	SM01007	Class II Aldolase and Adducin N-terminal domain
TT_RS02115	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TT_RS02120	SM00382	ATPases associated with a variety of cellular activities
TT_RS02120	SM00464	Found in ATP-dependent protease La (LON)
TT_RS02130	SM00382	ATPases associated with a variety of cellular activities
TT_RS02140	SM00052	Putative diguanylate phosphodiesterase
TT_RS02140	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TT_RS02140	SM00267	diguanylate cyclase
TT_RS02260	SM00267	diguanylate cyclase
TT_RS02280	SM00867	YceI-like domain 
TT_RS02290	SM00729	Elongator protein 3, MiaB family, Radical SAM
TT_RS02305	SM00354	helix_turn _helix lactose operon repressor
TT_RS02310	SM01207	TT_RS02310
TT_RS02320	SM00849	Metallo-beta-lactamase superfamily
TT_RS02330	SM01209	TT_RS02330
TT_RS02330	SM01210	TT_RS02330
TT_RS02335	SM00091	PAS domain
TT_RS02335	SM00479	TT_RS02335
TT_RS02340	SM00448	cheY-homologous receiver domain
TT_RS02345	SM00387	Histidine kinase-like ATPases
TT_RS02345	SM00388	His Kinase A (phosphoacceptor) domain
TT_RS02355	SM00100	Cyclic nucleotide-monophosphate binding domain
TT_RS02355	SM00116	Domain in cystathionine beta-synthase and other proteins.
TT_RS02400	SM00843	TT_RS02400
TT_RS02405	SM00935	Outer membrane protein (OmpH-like)
TT_RS02415	SM00116	Domain in cystathionine beta-synthase and other proteins.
TT_RS02430	SM00116	Domain in cystathionine beta-synthase and other proteins.
TT_RS02445	SM00518	AP endonuclease family 2
TT_RS02455	SM00450	Rhodanese Homology Domain
TT_RS02460	SM00450	Rhodanese Homology Domain
TT_RS02460	SM00849	Metallo-beta-lactamase superfamily
TT_RS02470	SM00450	Rhodanese Homology Domain
TT_RS02490	SM00763	PrkA AAA domain
TT_RS02505	SM00849	Metallo-beta-lactamase superfamily
TT_RS02550	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TT_RS02630	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
TT_RS02700	SM00487	DEAD-like helicases superfamily
TT_RS02700	SM00490	helicase superfamily c-terminal domain
TT_RS02700	SM00982	TT_RS02700
TT_RS02700	SM01058	CarD-like/TRCF domain
TT_RS02720	SM00840	TT_RS02720
TT_RS02750	SM00968	SMC proteins Flexible Hinge Domain
TT_RS02755	SM00909	Sporulation and spore germination
TT_RS02780	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
TT_RS02805	SM00316	Ribosomal protein S1-like RNA-binding domain
TT_RS02805	SM00357	Cold shock protein domain
TT_RS02805	SM00955	TT_RS02805
TT_RS02815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TT_RS02825	SM01207	TT_RS02825
TT_RS02845	SM00798	AICARFT/IMPCHase bienzyme
TT_RS02845	SM00851	MGS-like domain
TT_RS02870	SM00116	Domain in cystathionine beta-synthase and other proteins.
TT_RS02880	SM00861	Transketolase, pyrimidine binding domain
TT_RS02910	SM00382	ATPases associated with a variety of cellular activities
TT_RS03000	SM01130	TT_RS03000
TT_RS03020	SM00903	Flavin reductase like domain
TT_RS03040	SM00382	ATPases associated with a variety of cellular activities
TT_RS03045	SM00382	ATPases associated with a variety of cellular activities
TT_RS03100	SM00382	ATPases associated with a variety of cellular activities
TT_RS03130	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TT_RS03165	SM00796	Allophanate hydrolase subunit 1
TT_RS03165	SM00797	Allophanate hydrolase subunit 2
TT_RS03175	SM00347	helix_turn_helix multiple antibiotic resistance protein
TT_RS03180	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TT_RS03180	SM00267	diguanylate cyclase
TT_RS03190	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TT_RS03190	SM00091	PAS domain
TT_RS03190	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TT_RS03210	SM00448	cheY-homologous receiver domain
TT_RS03210	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TT_RS03220	SM00855	Phosphoglycerate mutase family
TT_RS03260	SM00448	cheY-homologous receiver domain
TT_RS03260	SM00862	Transcriptional regulatory protein, C terminal
TT_RS03265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TT_RS03265	SM00387	Histidine kinase-like ATPases
TT_RS03265	SM00388	His Kinase A (phosphoacceptor) domain
TT_RS03285	SM00382	ATPases associated with a variety of cellular activities
TT_RS03335	SM00943	Bifunctional DNA primase/polymerase, N-terminal
TT_RS03390	SM00450	Rhodanese Homology Domain
TT_RS03400	SM00421	helix_turn_helix, Lux Regulon
TT_RS03400	SM00448	cheY-homologous receiver domain
TT_RS03430	SM00382	ATPases associated with a variety of cellular activities
TT_RS03430	SM00962	SRP54-type protein, GTPase domain
TT_RS03430	SM00963	SRP54-type protein, helical bundle domain
TT_RS03510	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
TT_RS03510	SM00475	5'-3' exonuclease
TT_RS03510	SM00482	DNA polymerase A domain
TT_RS03535	SM00116	Domain in cystathionine beta-synthase and other proteins.
TT_RS03535	SM00924	MgtE intracellular N domain
TT_RS03540	SM00327	von Willebrand factor (vWF) type A domain
TT_RS03560	SM00382	ATPases associated with a variety of cellular activities
TT_RS03560	SM00959	Rho termination factor, N-terminal domain
TT_RS03675	SM00842	Cell division protein FtsA
TT_RS03680	SM00864	Tubulin/FtsZ family, GTPase domain
TT_RS03680	SM00865	Tubulin/FtsZ family, C-terminal domain
TT_RS03720	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TT_RS03720	SM00292	breast cancer carboxy-terminal domain
TT_RS03720	SM00532	Ligase N family
TT_RS03730	SM00382	ATPases associated with a variety of cellular activities
TT_RS03785	SM00382	ATPases associated with a variety of cellular activities
TT_RS03785	SM00464	Found in ATP-dependent protease La (LON)
TT_RS03845	SM00878	Biotin carboxylase C-terminal domain
TT_RS03845	SM01209	TT_RS03845
TT_RS03855	SM00841	Elongation factor P, C-terminal
TT_RS03855	SM01185	TT_RS03855
TT_RS03885	SM00960	Roadblock/LC7 domain
TT_RS03920	SM01387	TT_RS03920
TT_RS03925	SM00316	Ribosomal protein S1-like RNA-binding domain
TT_RS03925	SM00322	K homology RNA-binding domain
TT_RS03930	SM00849	Metallo-beta-lactamase superfamily
TT_RS03935	SM00831	Cation transporter/ATPase, N-terminus
TT_RS03940	SM00448	cheY-homologous receiver domain
TT_RS03945	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TT_RS03945	SM00091	PAS domain
TT_RS03945	SM00387	Histidine kinase-like ATPases
TT_RS03945	SM00388	His Kinase A (phosphoacceptor) domain
TT_RS03955	SM00893	Electron transfer flavoprotein domain
TT_RS03960	SM00893	Electron transfer flavoprotein domain
TT_RS03975	SM00986	Uracil DNA glycosylase superfamily
TT_RS03975	SM00987	UreE urease accessory protein, C-terminal domain 
TT_RS03980	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TT_RS03980	SM00481	DNA polymerase alpha chain like domain
TT_RS03980	SM00483	DNA polymerase X family
TT_RS04005	SM00422	helix_turn_helix, mercury resistance
TT_RS04025	SM00382	ATPases associated with a variety of cellular activities
TT_RS04085	SM00062	Bacterial periplasmic substrate-binding proteins
TT_RS04085	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
TT_RS04105	SM00729	Elongator protein 3, MiaB family, Radical SAM
TT_RS04130	SM00226	Low molecular weight phosphatase family
TT_RS04135	SM00387	Histidine kinase-like ATPases
TT_RS04170	SM01133	TT_RS04170
TT_RS04175	SM00155	Phospholipase D. Active site motifs.
TT_RS04230	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TT_RS04255	SM01207	TT_RS04255
TT_RS04265	SM00382	ATPases associated with a variety of cellular activities
TT_RS04280	SM00917	LeuA allosteric (dimerisation) domain
TT_RS04290	SM00917	LeuA allosteric (dimerisation) domain
TT_RS04390	SM01329	TT_RS04390
TT_RS04405	SM00822	TT_RS04405
TT_RS04435	SM00382	ATPases associated with a variety of cellular activities
TT_RS04490	SM00957	SecA DEAD-like domain
TT_RS04490	SM00958	SecA preprotein cross-linking domain
TT_RS04520	SM00487	DEAD-like helicases superfamily
TT_RS04520	SM00490	helicase superfamily c-terminal domain
TT_RS04535	SM00400	zinc finger
TT_RS04535	SM00493	TT_RS04535
TT_RS04565	SM00487	DEAD-like helicases superfamily
TT_RS04565	SM00490	helicase superfamily c-terminal domain
TT_RS04640	SM00849	Metallo-beta-lactamase superfamily
TT_RS04645	SM00220	Serine/Threonine protein kinases, catalytic domain
TT_RS04695	SM00382	ATPases associated with a variety of cellular activities
TT_RS04700	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TT_RS04700	SM00245	tail specific protease
TT_RS04740	SM00382	ATPases associated with a variety of cellular activities
TT_RS04760	SM00729	Elongator protein 3, MiaB family, Radical SAM
TT_RS04765	SM00704	CDGSH-type zinc finger. Function unknown.
TT_RS04770	SM00729	Elongator protein 3, MiaB family, Radical SAM
TT_RS04800	SM00116	Domain in cystathionine beta-synthase and other proteins.
TT_RS04830	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TT_RS04845	SM00853	MutL C terminal dimerisation domain
TT_RS04845	SM01340	TT_RS04845
TT_RS04850	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
TT_RS04850	SM00534	ATPase domain of DNA mismatch repair MUTS family
TT_RS04875	SM01230	TT_RS04875
TT_RS04895	SM00382	ATPases associated with a variety of cellular activities
TT_RS04900	SM00382	ATPases associated with a variety of cellular activities
TT_RS04930	SM00382	ATPases associated with a variety of cellular activities
TT_RS04935	SM00382	ATPases associated with a variety of cellular activities
TT_RS04965	SM00563	Phosphate acyltransferases
TT_RS04970	SM00411	bacterial (prokaryotic) histone like domain
TT_RS04985	SM00421	helix_turn_helix, Lux Regulon
TT_RS04985	SM00448	cheY-homologous receiver domain
TT_RS05000	SM00434	DNA Topoisomerase IV
TT_RS05020	SM00419	helix_turn_helix, cAMP Regulatory protein
TT_RS05035	SM00448	cheY-homologous receiver domain
TT_RS05035	SM00862	Transcriptional regulatory protein, C terminal
TT_RS05040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TT_RS05040	SM00387	Histidine kinase-like ATPases
TT_RS05040	SM00388	His Kinase A (phosphoacceptor) domain
TT_RS05075	SM00220	Serine/Threonine protein kinases, catalytic domain
TT_RS05080	SM00646	TT_RS05080
TT_RS05110	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TT_RS05120	SM01329	TT_RS05120
TT_RS05180	SM00563	Phosphate acyltransferases
TT_RS05235	SM00028	Tetratricopeptide repeats
TT_RS05270	SM00382	ATPases associated with a variety of cellular activities
TT_RS05300	SM00450	Rhodanese Homology Domain
TT_RS05340	SM00594	TT_RS05340
TT_RS05350	SM00382	ATPases associated with a variety of cellular activities
TT_RS05375	SM00849	Metallo-beta-lactamase superfamily
TT_RS05410	SM00382	ATPases associated with a variety of cellular activities
TT_RS05415	SM00100	Cyclic nucleotide-monophosphate binding domain
TT_RS05415	SM00419	helix_turn_helix, cAMP Regulatory protein
TT_RS05430	SM00382	ATPases associated with a variety of cellular activities
TT_RS05465	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
TT_RS05465	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
TT_RS05480	SM00155	Phospholipase D. Active site motifs.
TT_RS05530	SM00382	ATPases associated with a variety of cellular activities
TT_RS05605	SM00116	Domain in cystathionine beta-synthase and other proteins.
TT_RS05675	SM00382	ATPases associated with a variety of cellular activities
TT_RS05675	SM01086	C-terminal, D2-small domain, of ClpB protein
TT_RS05685	SM00271	DnaJ molecular chaperone homology domain
TT_RS05700	SM00382	ATPases associated with a variety of cellular activities
TT_RS05725	SM00232	JAB/MPN domain
TT_RS05730	SM00838	Elongation factor G C-terminus
TT_RS05730	SM00889	Elongation factor G, domain IV
TT_RS05735	SM00382	ATPases associated with a variety of cellular activities
TT_RS05750	SM00448	cheY-homologous receiver domain
TT_RS05750	SM00862	Transcriptional regulatory protein, C terminal
TT_RS05755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TT_RS05755	SM00387	Histidine kinase-like ATPases
TT_RS05755	SM00388	His Kinase A (phosphoacceptor) domain
TT_RS05790	SM00867	YceI-like domain 
TT_RS05805	SM00998	Adenylosuccinate lyase C-terminus
TT_RS05825	SM01211	TT_RS05825
TT_RS05845	SM00981	TT_RS05845
TT_RS05875	SM00829	Enoylreductase
TT_RS05920	SM00955	TT_RS05920
TT_RS05925	SM01329	TT_RS05925
TT_RS05980	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TT_RS05985	SM01400	TT_RS05985
TT_RS06045	SM01409	TT_RS06045
TT_RS06050	SM00072	Guanylate kinase homologues.
TT_RS06055	SM00642	Alpha-amylase domain
TT_RS06075	SM00100	Cyclic nucleotide-monophosphate binding domain
TT_RS06075	SM00419	helix_turn_helix, cAMP Regulatory protein
TT_RS06085	SM00028	Tetratricopeptide repeats
TT_RS06120	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
TT_RS06125	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
TT_RS06140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
TT_RS06140	SM00895	TT_RS06140
TT_RS06175	SM00387	Histidine kinase-like ATPases
TT_RS06175	SM00433	TopoisomeraseII
TT_RS06205	SM00387	Histidine kinase-like ATPases
TT_RS06205	SM00388	His Kinase A (phosphoacceptor) domain
TT_RS06210	SM00448	cheY-homologous receiver domain
TT_RS06210	SM00862	Transcriptional regulatory protein, C terminal
TT_RS06215	SM00220	Serine/Threonine protein kinases, catalytic domain
TT_RS06220	SM00331	Sigma factor PP2C-like phosphatases
TT_RS06220	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
TT_RS06245	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TT_RS06245	SM00493	TT_RS06245
TT_RS06255	SM00960	Roadblock/LC7 domain
TT_RS06260	SM00960	Roadblock/LC7 domain
TT_RS06295	SM00834	Putative regulatory protein
TT_RS06335	SM00729	Elongator protein 3, MiaB family, Radical SAM
TT_RS06355	SM00450	Rhodanese Homology Domain
TT_RS06360	SM00849	Metallo-beta-lactamase superfamily
TT_RS06395	SM00382	ATPases associated with a variety of cellular activities
TT_RS06430	SM01400	TT_RS06430
TT_RS06450	SM00267	diguanylate cyclase
TT_RS06470	SM00382	ATPases associated with a variety of cellular activities
TT_RS06470	SM00463	Small MutS-related domain
TT_RS06470	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
TT_RS06470	SM00534	ATPase domain of DNA mismatch repair MUTS family
TT_RS06475	SM00642	Alpha-amylase domain
TT_RS06525	SM00881	CoA binding domain
TT_RS06535	SM00028	Tetratricopeptide repeats
TT_RS06540	SM00507	HNH nucleases
TT_RS06560	SM00662	RNA polymerases D
TT_RS06565	SM00363	S4 RNA-binding domain
TT_RS06565	SM01390	TT_RS06565
TT_RS06645	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
TT_RS06650	SM01374	TT_RS06650
TT_RS06670	SM00322	K homology RNA-binding domain
TT_RS06685	SM01382	TT_RS06685
TT_RS06685	SM01383	TT_RS06685
TT_RS06705	SM01403	TT_RS06705
TT_RS06715	SM00838	Elongation factor G C-terminus
TT_RS06715	SM00889	Elongation factor G, domain IV
TT_RS06840	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TT_RS06840	SM00954	Region found in RelA / SpoT proteins
TT_RS06865	SM00448	cheY-homologous receiver domain
TT_RS06865	SM00862	Transcriptional regulatory protein, C terminal
TT_RS06870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TT_RS06870	SM00387	Histidine kinase-like ATPases
TT_RS06870	SM00388	His Kinase A (phosphoacceptor) domain
TT_RS06970	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
TT_RS07000	SM00316	Ribosomal protein S1-like RNA-binding domain
TT_RS07055	SM00267	diguanylate cyclase
TT_RS07125	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
TT_RS07165	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TT_RS07220	SM00933	TT_RS07220
TT_RS07225	SM00382	ATPases associated with a variety of cellular activities
TT_RS07290	SM00851	MGS-like domain
TT_RS07300	SM00981	TT_RS07300
TT_RS07350	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
TT_RS07350	SM01232	TT_RS07350
TT_RS07375	SM01007	Class II Aldolase and Adducin N-terminal domain
TT_RS07380	SM00663	RNA polymerase I subunit A N-terminus
TT_RS07405	SM00322	K homology RNA-binding domain
TT_RS07405	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TT_RS07410	SM00382	ATPases associated with a variety of cellular activities
TT_RS07420	SM00852	Probable molybdopterin binding domain
TT_RS07445	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
TT_RS07470	SM00732	Likely ribonuclease with RNase H fold.
TT_RS07480	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TT_RS07495	SM00382	ATPases associated with a variety of cellular activities
TT_RS07555	SM00028	Tetratricopeptide repeats
TT_RS07580	SM00226	Low molecular weight phosphatase family
TT_RS07605	SM00903	Flavin reductase like domain
TT_RS07650	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TT_RS07680	SM00382	ATPases associated with a variety of cellular activities
TT_RS07700	SM00382	ATPases associated with a variety of cellular activities
TT_RS07720	SM00487	DEAD-like helicases superfamily
TT_RS07720	SM00490	helicase superfamily c-terminal domain
TT_RS07745	SM00478	endonuclease III
TT_RS07745	SM00525	TT_RS07745
TT_RS07750	SM00881	CoA binding domain
TT_RS07780	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TT_RS07880	SM00382	ATPases associated with a variety of cellular activities
TT_RS07905	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
TT_RS07950	SM00829	Enoylreductase
TT_RS07960	SM00729	Elongator protein 3, MiaB family, Radical SAM
TT_RS07975	SM00937	TT_RS07975
TT_RS08030	SM00382	ATPases associated with a variety of cellular activities
TT_RS08065	SM00873	B3/4 domain
TT_RS08065	SM00874	tRNA synthetase B5 domain
TT_RS08065	SM00896	Ferredoxin-fold anticodon binding domain
TT_RS08100	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TT_RS08110	SM00470	ParB-like nuclease domain
TT_RS08125	SM01228	TT_RS08125
TT_RS08130	SM00382	ATPases associated with a variety of cellular activities
TT_RS08130	SM00760	Bacterial dnaA protein helix-turn-helix domain
TT_RS08135	SM00480	DNA polymerase III beta subunit
TT_RS08140	SM01192	TT_RS08140
TT_RS08140	SM01193	TT_RS08140
TT_RS08155	SM00849	Metallo-beta-lactamase superfamily
TT_RS08160	SM00861	Transketolase, pyrimidine binding domain
TT_RS08195	SM00855	Phosphoglycerate mutase family
TT_RS08205	SM00845	GatB domain
TT_RS08235	SM00357	Cold shock protein domain
TT_RS08280	SM00116	Domain in cystathionine beta-synthase and other proteins.
TT_RS08320	SM00852	Probable molybdopterin binding domain
TT_RS08370	SM00481	DNA polymerase alpha chain like domain
TT_RS08380	SM00478	endonuclease III
TT_RS08585	SM00967	RNA 2'-O ribose methyltransferase substrate binding
TT_RS08610	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TT_RS08620	SM00861	Transketolase, pyrimidine binding domain
TT_RS08660	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
TT_RS08685	SM00881	CoA binding domain
TT_RS08690	SM00967	RNA 2'-O ribose methyltransferase substrate binding
TT_RS08695	SM00883	Chaperonin 10 Kd subunit
TT_RS08725	SM00257	Lysin motif
TT_RS08745	SM00382	ATPases associated with a variety of cellular activities
TT_RS08795	SM00849	Metallo-beta-lactamase superfamily
TT_RS08795	SM01027	Beta-Casp domain
TT_RS08835	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
TT_RS08835	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
TT_RS08840	SM00649	Ribosomal protein L11/L12
TT_RS08880	SM00822	TT_RS08880
TT_RS08890	SM00729	Elongator protein 3, MiaB family, Radical SAM
TT_RS08935	SM00861	Transketolase, pyrimidine binding domain
TT_RS08975	SM00788	Adenylosuccinate synthetase
TT_RS08990	SM00363	S4 RNA-binding domain
TT_RS09005	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
TT_RS09005	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
TT_RS09015	SM01120	TT_RS09015
TT_RS09015	SM01121	TT_RS09015
TT_RS09055	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
TT_RS09055	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
TT_RS09080	SM00382	ATPases associated with a variety of cellular activities
TT_RS09085	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
TT_RS09135	SM00905	Dihydroneopterin aldolase
TT_RS09145	SM00562	TT_RS09145
TT_RS09150	SM00331	Sigma factor PP2C-like phosphatases
TT_RS09150	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
TT_RS09185	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
TT_RS09185	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
TT_RS09185	SM00481	DNA polymerase alpha chain like domain
TT_RS09210	SM00357	Cold shock protein domain
TT_RS09215	SM00271	DnaJ molecular chaperone homology domain
TT_RS09245	SM01058	CarD-like/TRCF domain
TT_RS09280	SM00316	Ribosomal protein S1-like RNA-binding domain
TT_RS09325	SM00829	Enoylreductase
TT_RS09330	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
TT_RS09380	SM00382	ATPases associated with a variety of cellular activities
TT_RS09395	SM00363	S4 RNA-binding domain
TT_RS09405	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TT_RS09410	SM00448	cheY-homologous receiver domain
TT_RS09410	SM00862	Transcriptional regulatory protein, C terminal
TT_RS09415	SM00387	Histidine kinase-like ATPases
TT_RS09415	SM00388	His Kinase A (phosphoacceptor) domain
TT_RS09425	SM00937	TT_RS09425
TT_RS09445	SM00564	beta-propeller repeat
TT_RS09480	SM00506	Appr-1"-p processing enzyme
TT_RS09610	SM00946	Prolyl-tRNA synthetase, C-terminal
TT_RS09615	SM00382	ATPases associated with a variety of cellular activities
TT_RS09620	SM01022	TT_RS09620
TT_RS09625	SM00478	endonuclease III
TT_RS09625	SM00525	TT_RS09625
TT_RS09635	SM00852	Probable molybdopterin binding domain
TT_RS09640	SM00487	DEAD-like helicases superfamily
TT_RS09640	SM00490	helicase superfamily c-terminal domain
TT_RS09650	SM00861	Transketolase, pyrimidine binding domain
TT_RS09700	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TT_RS09705	SM00836	DALR anticodon binding domain
TT_RS09705	SM01016	Arginyl tRNA synthetase N terminal dom
TT_RS09745	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
TT_RS09745	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
TT_RS09750	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
TT_RS09780	SM00650	Ribosomal RNA adenine dimethylases
TT_RS09825	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
TT_RS09825	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
TT_RS09830	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
TT_RS09830	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
TT_RS09830	SM00493	TT_RS09830
TT_RS09845	SM00382	ATPases associated with a variety of cellular activities
TT_RS09895	SM01005	Alanine racemase, C-terminal domain
TT_RS09920	SM00938	Nitrogen regulatory protein P-II
TT_RS09960	SM00046	Diacylglycerol kinase catalytic domain (presumed)
TT_RS10025	SM00704	CDGSH-type zinc finger. Function unknown.
TT_RS10065	SM00448	cheY-homologous receiver domain
TT_RS10065	SM00862	Transcriptional regulatory protein, C terminal
TT_RS10080	SM00028	Tetratricopeptide repeats
TT_RS10115	SM00729	Elongator protein 3, MiaB family, Radical SAM
TT_RS10640	SM00116	Domain in cystathionine beta-synthase and other proteins.
