THIAE_RS00005	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
THIAE_RS00010	SM00480	DNA polymerase III beta subunit
THIAE_RS00030	SM00729	Elongator protein 3, MiaB family, Radical SAM
THIAE_RS00045	SM00852	Probable molybdopterin binding domain
THIAE_RS00090	SM00897	FIST N domain
THIAE_RS00090	SM01204	THIAE_RS00090
THIAE_RS00095	SM00387	Histidine kinase-like ATPases
THIAE_RS00095	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS00095	SM00448	cheY-homologous receiver domain
THIAE_RS00100	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS00100	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THIAE_RS00100	SM00091	PAS domain
THIAE_RS00100	SM00267	diguanylate cyclase
THIAE_RS00115	SM00448	cheY-homologous receiver domain
THIAE_RS00120	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THIAE_RS00120	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THIAE_RS00120	SM00091	PAS domain
THIAE_RS00120	SM00387	Histidine kinase-like ATPases
THIAE_RS00120	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS00120	SM00448	cheY-homologous receiver domain
THIAE_RS00130	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS00130	SM00267	diguanylate cyclase
THIAE_RS00150	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS00215	SM00729	Elongator protein 3, MiaB family, Radical SAM
THIAE_RS00225	SM00487	DEAD-like helicases superfamily
THIAE_RS00225	SM00490	helicase superfamily c-terminal domain
THIAE_RS00245	SM00073	Histidine Phosphotransfer domain
THIAE_RS00255	SM00838	Elongation factor G C-terminus
THIAE_RS00285	SM01018	B12 binding domain
THIAE_RS00300	SM00487	DEAD-like helicases superfamily
THIAE_RS00300	SM00490	helicase superfamily c-terminal domain
THIAE_RS00310	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THIAE_RS00310	SM00954	Region found in RelA / SpoT proteins
THIAE_RS00315	SM01409	THIAE_RS00315
THIAE_RS00335	SM01004	Delta-aminolevulinic acid dehydratase
THIAE_RS00355	SM00267	diguanylate cyclase
THIAE_RS00355	SM00448	cheY-homologous receiver domain
THIAE_RS00425	SM00852	Probable molybdopterin binding domain
THIAE_RS00475	SM00072	Guanylate kinase homologues.
THIAE_RS00520	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THIAE_RS00535	SM00861	Transketolase, pyrimidine binding domain
THIAE_RS00540	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
THIAE_RS00560	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS00680	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
THIAE_RS00680	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
THIAE_RS00685	SM00649	Ribosomal protein L11/L12
THIAE_RS00710	SM00663	RNA polymerase I subunit A N-terminus
THIAE_RS00725	SM00838	Elongation factor G C-terminus
THIAE_RS00725	SM00889	Elongation factor G, domain IV
THIAE_RS00735	SM01403	THIAE_RS00735
THIAE_RS00755	SM01382	THIAE_RS00755
THIAE_RS00755	SM01383	THIAE_RS00755
THIAE_RS00770	SM00322	K homology RNA-binding domain
THIAE_RS00790	SM01374	THIAE_RS00790
THIAE_RS00795	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
THIAE_RS00855	SM00363	S4 RNA-binding domain
THIAE_RS00855	SM01390	THIAE_RS00855
THIAE_RS00860	SM00662	RNA polymerases D
THIAE_RS00885	SM01116	THIAE_RS00885
THIAE_RS00890	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS00905	SM00091	PAS domain
THIAE_RS00905	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS00940	SM00903	Flavin reductase like domain
THIAE_RS01005	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
THIAE_RS01025	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS01030	SM00883	Chaperonin 10 Kd subunit
THIAE_RS01040	SM00859	Semialdehyde dehydrogenase, NAD binding domain
THIAE_RS01065	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THIAE_RS01065	SM00091	PAS domain
THIAE_RS01070	SM00422	helix_turn_helix, mercury resistance
THIAE_RS01125	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS01145	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS01175	SM00842	Cell division protein FtsA
THIAE_RS01190	SM00957	SecA DEAD-like domain
THIAE_RS01190	SM00958	SecA preprotein cross-linking domain
THIAE_RS01225	SM00479	THIAE_RS01225
THIAE_RS01285	SM00984	UDP binding domain
THIAE_RS01295	SM00917	LeuA allosteric (dimerisation) domain
THIAE_RS01335	SM00562	THIAE_RS01335
THIAE_RS01360	SM00564	beta-propeller repeat
THIAE_RS01400	SM00479	THIAE_RS01400
THIAE_RS01430	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
THIAE_RS01440	SM00450	Rhodanese Homology Domain
THIAE_RS01520	SM00825	Beta-ketoacyl synthase
THIAE_RS01535	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS01535	SM00962	SRP54-type protein, GTPase domain
THIAE_RS01535	SM00963	SRP54-type protein, helical bundle domain
THIAE_RS01620	SM00831	Cation transporter/ATPase, N-terminus
THIAE_RS01630	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
THIAE_RS01630	SM01232	THIAE_RS01630
THIAE_RS01670	SM00487	DEAD-like helicases superfamily
THIAE_RS01720	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THIAE_RS01720	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS01720	SM01358	THIAE_RS01720
THIAE_RS01745	SM00732	Likely ribonuclease with RNase H fold.
THIAE_RS01830	SM01234	THIAE_RS01830
THIAE_RS01840	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THIAE_RS01840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS01860	SM00530	Helix-turn-helix XRE-family like proteins 
THIAE_RS01915	SM00341	Helicase and RNase D C-terminal
THIAE_RS01915	SM00474	3'-5' exonuclease
THIAE_RS01970	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS01970	SM01086	C-terminal, D2-small domain, of ClpB protein
THIAE_RS01980	SM00450	Rhodanese Homology Domain
THIAE_RS02015	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS02015	SM01086	C-terminal, D2-small domain, of ClpB protein
THIAE_RS02020	SM00267	diguanylate cyclase
THIAE_RS02120	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THIAE_RS02120	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THIAE_RS02125	SM00448	cheY-homologous receiver domain
THIAE_RS02130	SM00411	bacterial (prokaryotic) histone like domain
THIAE_RS02155	SM00729	Elongator protein 3, MiaB family, Radical SAM
THIAE_RS02170	SM00116	Domain in cystathionine beta-synthase and other proteins.
THIAE_RS02170	SM01091	Transporter associated domain
THIAE_RS02180	SM01230	THIAE_RS02180
THIAE_RS02195	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS02205	SM00448	cheY-homologous receiver domain
THIAE_RS02205	SM00862	Transcriptional regulatory protein, C terminal
THIAE_RS02210	SM00387	Histidine kinase-like ATPases
THIAE_RS02210	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS02220	SM00563	Phosphate acyltransferases
THIAE_RS02230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THIAE_RS02230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS02240	SM00984	UDP binding domain
THIAE_RS02285	SM00650	Ribosomal RNA adenine dimethylases
THIAE_RS02325	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS02325	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THIAE_RS02325	SM00091	PAS domain
THIAE_RS02325	SM00267	diguanylate cyclase
THIAE_RS02330	SM00138	Methyltransferase, chemotaxis proteins 
THIAE_RS02335	SM01034	Sensors of blue-light using FAD
THIAE_RS02355	SM00729	Elongator protein 3, MiaB family, Radical SAM
THIAE_RS02375	SM00936	Penicillin-binding protein 5, C-terminal domain 
THIAE_RS02415	SM00845	GatB domain
THIAE_RS02470	SM00062	Bacterial periplasmic substrate-binding proteins
THIAE_RS02480	SM00316	Ribosomal protein S1-like RNA-binding domain
THIAE_RS02480	SM00357	Cold shock protein domain
THIAE_RS02480	SM00955	THIAE_RS02480
THIAE_RS02485	SM00967	RNA 2'-O ribose methyltransferase substrate binding
THIAE_RS02540	SM00487	DEAD-like helicases superfamily
THIAE_RS02605	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
THIAE_RS02605	SM00450	Rhodanese Homology Domain
THIAE_RS02610	SM00849	Metallo-beta-lactamase superfamily
THIAE_RS02625	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS02640	SM00327	von Willebrand factor (vWF) type A domain
THIAE_RS02645	SM00028	Tetratricopeptide repeats
THIAE_RS02645	SM00327	von Willebrand factor (vWF) type A domain
THIAE_RS02675	SM00244	prohibitin homologues
THIAE_RS02700	SM00448	cheY-homologous receiver domain
THIAE_RS02705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THIAE_RS02705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS02725	SM00387	Histidine kinase-like ATPases
THIAE_RS02725	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS02725	SM00448	cheY-homologous receiver domain
THIAE_RS02725	SM01079	THIAE_RS02725
THIAE_RS02730	SM00267	diguanylate cyclase
THIAE_RS02730	SM00387	Histidine kinase-like ATPases
THIAE_RS02730	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS02730	SM00448	cheY-homologous receiver domain
THIAE_RS02860	SM00836	DALR anticodon binding domain
THIAE_RS02870	SM00563	Phosphate acyltransferases
THIAE_RS02890	SM00986	Uracil DNA glycosylase superfamily
THIAE_RS02890	SM00987	UreE urease accessory protein, C-terminal domain 
THIAE_RS02900	SM00387	Histidine kinase-like ATPases
THIAE_RS02900	SM00433	TopoisomeraseII
THIAE_RS02905	SM00028	Tetratricopeptide repeats
THIAE_RS02920	SM00904	Riboflavin kinase
THIAE_RS02935	SM00267	diguanylate cyclase
THIAE_RS02955	SM00981	THIAE_RS02955
THIAE_RS02960	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS02960	SM00267	diguanylate cyclase
THIAE_RS02965	SM00729	Elongator protein 3, MiaB family, Radical SAM
THIAE_RS02975	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS03025	SM01011	Aminopeptidase P, N-terminal domain
THIAE_RS03050	SM01144	THIAE_RS03050
THIAE_RS03055	SM00316	Ribosomal protein S1-like RNA-binding domain
THIAE_RS03060	SM00363	S4 RNA-binding domain
THIAE_RS03095	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
THIAE_RS03100	SM00822	THIAE_RS03100
THIAE_RS03105	SM00823	Phosphopantetheine attachment site
THIAE_RS03110	SM00825	Beta-ketoacyl synthase
THIAE_RS03145	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS03185	SM00881	CoA binding domain
THIAE_RS03225	SM00100	Cyclic nucleotide-monophosphate binding domain
THIAE_RS03260	SM00729	Elongator protein 3, MiaB family, Radical SAM
THIAE_RS03270	SM00986	Uracil DNA glycosylase superfamily
THIAE_RS03270	SM00987	UreE urease accessory protein, C-terminal domain 
THIAE_RS03305	SM00271	DnaJ molecular chaperone homology domain
THIAE_RS03315	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS03315	SM01086	C-terminal, D2-small domain, of ClpB protein
THIAE_RS03320	SM00450	Rhodanese Homology Domain
THIAE_RS03340	SM00849	Metallo-beta-lactamase superfamily
THIAE_RS03350	SM00116	Domain in cystathionine beta-synthase and other proteins.
THIAE_RS03360	SM00831	Cation transporter/ATPase, N-terminus
THIAE_RS03415	SM00487	DEAD-like helicases superfamily
THIAE_RS03415	SM00490	helicase superfamily c-terminal domain
THIAE_RS03415	SM00982	THIAE_RS03415
THIAE_RS03415	SM01058	CarD-like/TRCF domain
THIAE_RS03430	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS03435	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS03450	SM00138	Methyltransferase, chemotaxis proteins 
THIAE_RS03455	SM00448	cheY-homologous receiver domain
THIAE_RS03460	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THIAE_RS03465	SM00487	DEAD-like helicases superfamily
THIAE_RS03465	SM00490	helicase superfamily c-terminal domain
THIAE_RS03505	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS03560	SM00271	DnaJ molecular chaperone homology domain
THIAE_RS03570	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
THIAE_RS03575	SM00851	MGS-like domain
THIAE_RS03575	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
THIAE_RS03600	SM00116	Domain in cystathionine beta-synthase and other proteins.
THIAE_RS03615	SM00421	helix_turn_helix, Lux Regulon
THIAE_RS03615	SM00448	cheY-homologous receiver domain
THIAE_RS03625	SM00267	diguanylate cyclase
THIAE_RS03630	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS03730	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THIAE_RS03735	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS03800	SM00260	Two component signalling adaptor domain
THIAE_RS03850	SM01323	THIAE_RS03850
THIAE_RS03880	SM00843	THIAE_RS03880
THIAE_RS03890	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS03935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THIAE_RS03985	SM00935	Outer membrane protein (OmpH-like)
THIAE_RS04015	SM00260	Two component signalling adaptor domain
THIAE_RS04015	SM00448	cheY-homologous receiver domain
THIAE_RS04025	SM00488	THIAE_RS04025
THIAE_RS04025	SM00491	THIAE_RS04025
THIAE_RS04060	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS04140	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
THIAE_RS04175	SM01252	THIAE_RS04175
THIAE_RS04250	SM00901	THIAE_RS04250
THIAE_RS04365	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS04365	SM00091	PAS domain
THIAE_RS04365	SM00267	diguanylate cyclase
THIAE_RS04380	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THIAE_RS04385	SM00838	Elongation factor G C-terminus
THIAE_RS04395	SM00358	Double-stranded RNA binding motif
THIAE_RS04395	SM00535	Ribonuclease III family
THIAE_RS04420	SM00316	Ribosomal protein S1-like RNA-binding domain
THIAE_RS04455	SM00481	DNA polymerase alpha chain like domain
THIAE_RS04480	SM00479	THIAE_RS04480
THIAE_RS04490	SM00316	Ribosomal protein S1-like RNA-binding domain
THIAE_RS04490	SM00322	K homology RNA-binding domain
THIAE_RS04515	SM00100	Cyclic nucleotide-monophosphate binding domain
THIAE_RS04520	SM01387	THIAE_RS04520
THIAE_RS04525	SM00316	Ribosomal protein S1-like RNA-binding domain
THIAE_RS04525	SM00322	K homology RNA-binding domain
THIAE_RS04530	SM01264	THIAE_RS04530
THIAE_RS04580	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS04625	SM00841	Elongation factor P, C-terminal
THIAE_RS04625	SM01185	THIAE_RS04625
THIAE_RS04640	SM00465	GIY-YIG type nucleases (URI domain)
THIAE_RS04640	SM00479	THIAE_RS04640
THIAE_RS04660	SM00448	cheY-homologous receiver domain
THIAE_RS04665	SM00670	Large family of predicted nucleotide-binding domains
THIAE_RS04675	SM01130	THIAE_RS04675
THIAE_RS04685	SM01211	THIAE_RS04685
THIAE_RS04710	SM00937	THIAE_RS04710
THIAE_RS04720	SM00316	Ribosomal protein S1-like RNA-binding domain
THIAE_RS04720	SM00732	Likely ribonuclease with RNase H fold.
THIAE_RS04770	SM00434	DNA Topoisomerase IV
THIAE_RS04780	SM00830	Chorismate mutase type II
THIAE_RS04805	SM00316	Ribosomal protein S1-like RNA-binding domain
THIAE_RS04810	SM00411	bacterial (prokaryotic) histone like domain
THIAE_RS04820	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
THIAE_RS04845	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS04850	SM01005	Alanine racemase, C-terminal domain
THIAE_RS04885	SM00448	cheY-homologous receiver domain
THIAE_RS04885	SM00862	Transcriptional regulatory protein, C terminal
THIAE_RS04925	SM00849	Metallo-beta-lactamase superfamily
THIAE_RS04935	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS04945	SM00852	Probable molybdopterin binding domain
THIAE_RS04960	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
THIAE_RS04980	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS04995	SM01012	THIAE_RS04995
THIAE_RS05065	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THIAE_RS05065	SM00465	GIY-YIG type nucleases (URI domain)
THIAE_RS05080	SM00954	Region found in RelA / SpoT proteins
THIAE_RS05100	SM01350	THIAE_RS05100
THIAE_RS05135	SM01118	THIAE_RS05135
THIAE_RS05160	SM00363	S4 RNA-binding domain
THIAE_RS05185	SM00481	DNA polymerase alpha chain like domain
THIAE_RS05220	SM00278	Helix-hairpin-helix DNA-binding motif class 1
THIAE_RS05220	SM00292	breast cancer carboxy-terminal domain
THIAE_RS05220	SM00532	Ligase N family
THIAE_RS05225	SM00771	ZipA, C-terminal domain (FtsZ-binding)
THIAE_RS05300	SM00257	Lysin motif
THIAE_RS05330	SM01192	THIAE_RS05330
THIAE_RS05330	SM01193	THIAE_RS05330
THIAE_RS05420	SM00644	THIAE_RS05420
THIAE_RS05435	SM00363	S4 RNA-binding domain
THIAE_RS05460	SM00849	Metallo-beta-lactamase superfamily
THIAE_RS05465	SM00257	Lysin motif
THIAE_RS05475	SM00840	THIAE_RS05475
THIAE_RS05505	SM00450	Rhodanese Homology Domain
THIAE_RS05525	SM00938	Nitrogen regulatory protein P-II
THIAE_RS05530	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS05530	SM00448	cheY-homologous receiver domain
THIAE_RS05535	SM00387	Histidine kinase-like ATPases
THIAE_RS05535	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS05540	SM00529	Helix-turn-helix diphteria tox regulatory element
THIAE_RS05540	SM00899	THIAE_RS05540
THIAE_RS05550	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS05580	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
THIAE_RS05590	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS05590	SM00091	PAS domain
THIAE_RS05590	SM00267	diguanylate cyclase
THIAE_RS05595	SM00091	PAS domain
THIAE_RS05595	SM00138	Methyltransferase, chemotaxis proteins 
THIAE_RS05620	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS05620	SM00464	Found in ATP-dependent protease La (LON)
THIAE_RS05625	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS05625	SM00994	ClpX C4-type zinc finger
THIAE_RS05625	SM01086	C-terminal, D2-small domain, of ClpB protein
THIAE_RS05755	SM00487	DEAD-like helicases superfamily
THIAE_RS05755	SM00490	helicase superfamily c-terminal domain
THIAE_RS05805	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS05880	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
THIAE_RS05880	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
THIAE_RS05880	SM00493	THIAE_RS05880
THIAE_RS05885	SM00671	Sel1-like repeats.
THIAE_RS06065	SM00857	Resolvase, N terminal domain
THIAE_RS06115	SM00318	Staphylococcal nuclease homologues
THIAE_RS06195	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
THIAE_RS06200	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
THIAE_RS06255	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS06265	SM01103	THIAE_RS06265
THIAE_RS06315	SM00859	Semialdehyde dehydrogenase, NAD binding domain
THIAE_RS06330	SM01329	THIAE_RS06330
THIAE_RS06355	SM00434	DNA Topoisomerase IV
THIAE_RS06365	SM00448	cheY-homologous receiver domain
THIAE_RS06390	SM00937	THIAE_RS06390
THIAE_RS06430	SM00316	Ribosomal protein S1-like RNA-binding domain
THIAE_RS06530	SM00900	THIAE_RS06530
THIAE_RS06540	SM00478	endonuclease III
THIAE_RS06540	SM00525	THIAE_RS06540
THIAE_RS06585	SM01322	THIAE_RS06585
THIAE_RS06615	SM00671	Sel1-like repeats.
THIAE_RS06625	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS06625	SM00267	diguanylate cyclase
THIAE_RS06655	SM00530	Helix-turn-helix XRE-family like proteins 
THIAE_RS06700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS06700	SM00387	Histidine kinase-like ATPases
THIAE_RS06700	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS06705	SM00448	cheY-homologous receiver domain
THIAE_RS06705	SM00862	Transcriptional regulatory protein, C terminal
THIAE_RS06715	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS06715	SM00487	DEAD-like helicases superfamily
THIAE_RS06715	SM00490	helicase superfamily c-terminal domain
THIAE_RS06715	SM00847	Helicase associated domain (HA2)  Add an annotation
THIAE_RS06715	SM00962	SRP54-type protein, GTPase domain
THIAE_RS06740	SM00479	THIAE_RS06740
THIAE_RS06765	SM00267	diguanylate cyclase
THIAE_RS06765	SM00448	cheY-homologous receiver domain
THIAE_RS06780	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS06835	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THIAE_RS06845	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS06860	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THIAE_RS06860	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS06890	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THIAE_RS06900	SM00788	Adenylosuccinate synthetase
THIAE_RS06915	SM00244	prohibitin homologues
THIAE_RS06920	SM00244	prohibitin homologues
THIAE_RS06940	SM00853	MutL C terminal dimerisation domain
THIAE_RS06940	SM01340	THIAE_RS06940
THIAE_RS06945	SM00257	Lysin motif
THIAE_RS06945	SM00646	THIAE_RS06945
THIAE_RS06960	SM00260	Two component signalling adaptor domain
THIAE_RS06965	SM00073	Histidine Phosphotransfer domain
THIAE_RS06965	SM00260	Two component signalling adaptor domain
THIAE_RS06965	SM00387	Histidine kinase-like ATPases
THIAE_RS06965	SM01231	THIAE_RS06965
THIAE_RS06975	SM00448	cheY-homologous receiver domain
THIAE_RS06990	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS06990	SM00962	SRP54-type protein, GTPase domain
THIAE_RS07055	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THIAE_RS07070	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS07095	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS07095	SM00448	cheY-homologous receiver domain
THIAE_RS07100	SM00091	PAS domain
THIAE_RS07100	SM00387	Histidine kinase-like ATPases
THIAE_RS07100	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS07270	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
THIAE_RS07280	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS07290	SM00138	Methyltransferase, chemotaxis proteins 
THIAE_RS07310	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
THIAE_RS07310	SM00534	ATPase domain of DNA mismatch repair MUTS family
THIAE_RS07315	SM00028	Tetratricopeptide repeats
THIAE_RS07365	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS07365	SM00962	SRP54-type protein, GTPase domain
THIAE_RS07365	SM00963	SRP54-type protein, helical bundle domain
THIAE_RS07375	SM01091	Transporter associated domain
THIAE_RS07385	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS07440	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS07465	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS07495	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS07505	SM00226	Low molecular weight phosphatase family
THIAE_RS07530	SM00387	Histidine kinase-like ATPases
THIAE_RS07540	SM00073	Histidine Phosphotransfer domain
THIAE_RS07540	SM00260	Two component signalling adaptor domain
THIAE_RS07540	SM00387	Histidine kinase-like ATPases
THIAE_RS07540	SM01231	THIAE_RS07540
THIAE_RS07560	SM00116	Domain in cystathionine beta-synthase and other proteins.
THIAE_RS07560	SM01240	THIAE_RS07560
THIAE_RS07585	SM00849	Metallo-beta-lactamase superfamily
THIAE_RS07635	SM01057	Eukaryotic-type carbonic anhydrase
THIAE_RS07645	SM00852	Probable molybdopterin binding domain
THIAE_RS07650	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS07650	SM00464	Found in ATP-dependent protease La (LON)
THIAE_RS07670	SM00450	Rhodanese Homology Domain
THIAE_RS07685	SM00260	Two component signalling adaptor domain
THIAE_RS07685	SM00448	cheY-homologous receiver domain
THIAE_RS07730	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS07755	SM00849	Metallo-beta-lactamase superfamily
THIAE_RS07760	SM00387	Histidine kinase-like ATPases
THIAE_RS07760	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS07765	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS07765	SM00448	cheY-homologous receiver domain
THIAE_RS07780	SM00530	Helix-turn-helix XRE-family like proteins 
THIAE_RS07800	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS07850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS07850	SM00387	Histidine kinase-like ATPases
THIAE_RS07850	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS07855	SM00530	Helix-turn-helix XRE-family like proteins 
THIAE_RS07865	SM00448	cheY-homologous receiver domain
THIAE_RS07865	SM00862	Transcriptional regulatory protein, C terminal
THIAE_RS07890	SM00267	diguanylate cyclase
THIAE_RS07890	SM00448	cheY-homologous receiver domain
THIAE_RS07900	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS07900	SM00267	diguanylate cyclase
THIAE_RS07940	SM00878	Biotin carboxylase C-terminal domain
THIAE_RS07960	SM00798	AICARFT/IMPCHase bienzyme
THIAE_RS07960	SM00851	MGS-like domain
THIAE_RS07965	SM01209	THIAE_RS07965
THIAE_RS07965	SM01210	THIAE_RS07965
THIAE_RS07970	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS08010	SM00267	diguanylate cyclase
THIAE_RS08075	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS08080	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS08145	SM00493	THIAE_RS08145
THIAE_RS08155	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS08170	SM00642	Alpha-amylase domain
THIAE_RS08210	SM00116	Domain in cystathionine beta-synthase and other proteins.
THIAE_RS08240	SM01001	AIR carboxylase
THIAE_RS08285	SM00912	haemagglutination activity domain
THIAE_RS08300	SM00448	cheY-homologous receiver domain
THIAE_RS08300	SM00862	Transcriptional regulatory protein, C terminal
THIAE_RS08305	SM00387	Histidine kinase-like ATPases
THIAE_RS08320	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
THIAE_RS08320	SM00245	tail specific protease
THIAE_RS08325	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
THIAE_RS08375	SM00864	Tubulin/FtsZ family, GTPase domain
THIAE_RS08375	SM00865	Tubulin/FtsZ family, C-terminal domain
THIAE_RS08435	SM00400	zinc finger
THIAE_RS08435	SM00493	THIAE_RS08435
THIAE_RS08455	SM01207	THIAE_RS08455
THIAE_RS08460	SM00905	Dihydroneopterin aldolase
THIAE_RS08480	SM00116	Domain in cystathionine beta-synthase and other proteins.
THIAE_RS08480	SM00924	MgtE intracellular N domain
THIAE_RS08490	SM00116	Domain in cystathionine beta-synthase and other proteins.
THIAE_RS08490	SM00924	MgtE intracellular N domain
THIAE_RS08495	SM00528	Domain in histone-like proteins of HNS family
THIAE_RS08545	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
THIAE_RS08550	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
THIAE_RS08620	SM01400	THIAE_RS08620
THIAE_RS08655	SM00271	DnaJ molecular chaperone homology domain
THIAE_RS08755	SM00938	Nitrogen regulatory protein P-II
THIAE_RS08775	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
THIAE_RS08895	SM00422	helix_turn_helix, mercury resistance
THIAE_RS08900	SM00411	bacterial (prokaryotic) histone like domain
THIAE_RS08905	SM00873	B3/4 domain
THIAE_RS08905	SM00874	tRNA synthetase B5 domain
THIAE_RS08905	SM00896	Ferredoxin-fold anticodon binding domain
THIAE_RS08930	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
THIAE_RS08935	SM00650	Ribosomal RNA adenine dimethylases
THIAE_RS08980	SM00631	THIAE_RS08980
THIAE_RS08995	SM00487	DEAD-like helicases superfamily
THIAE_RS08995	SM00490	helicase superfamily c-terminal domain
THIAE_RS09055	SM00487	DEAD-like helicases superfamily
THIAE_RS09055	SM00490	helicase superfamily c-terminal domain
THIAE_RS09085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS09085	SM00387	Histidine kinase-like ATPases
THIAE_RS09085	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS09090	SM00448	cheY-homologous receiver domain
THIAE_RS09090	SM00862	Transcriptional regulatory protein, C terminal
THIAE_RS09100	SM00849	Metallo-beta-lactamase superfamily
THIAE_RS09125	SM00487	DEAD-like helicases superfamily
THIAE_RS09125	SM00490	helicase superfamily c-terminal domain
THIAE_RS09130	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
THIAE_RS09200	SM00479	THIAE_RS09200
THIAE_RS09215	SM00271	DnaJ molecular chaperone homology domain
THIAE_RS09225	SM00487	DEAD-like helicases superfamily
THIAE_RS09225	SM00490	helicase superfamily c-terminal domain
THIAE_RS09230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THIAE_RS09230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS09235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THIAE_RS09235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS09240	SM00260	Two component signalling adaptor domain
THIAE_RS09255	SM00978	THIAE_RS09255
THIAE_RS09410	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS09470	SM01022	THIAE_RS09470
THIAE_RS09505	SM00836	DALR anticodon binding domain
THIAE_RS09505	SM01016	Arginyl tRNA synthetase N terminal dom
THIAE_RS09510	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
THIAE_RS09510	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
THIAE_RS09510	SM00493	THIAE_RS09510
THIAE_RS09550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS09550	SM00387	Histidine kinase-like ATPases
THIAE_RS09550	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS09555	SM00448	cheY-homologous receiver domain
THIAE_RS09675	SM00877	THIAE_RS09675
THIAE_RS09720	SM00877	THIAE_RS09720
THIAE_RS09725	SM00877	THIAE_RS09725
THIAE_RS09750	SM00961	Ribulose bisphosphate carboxylase, small chain
THIAE_RS09775	SM00357	Cold shock protein domain
THIAE_RS09790	SM00729	Elongator protein 3, MiaB family, Radical SAM
THIAE_RS09790	SM00876	Biotin and Thiamin Synthesis associated domain
THIAE_RS09805	SM00642	Alpha-amylase domain
THIAE_RS09830	SM00357	Cold shock protein domain
THIAE_RS09830	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS09830	SM00959	Rho termination factor, N-terminal domain
THIAE_RS09840	SM00318	Staphylococcal nuclease homologues
THIAE_RS09855	SM00478	endonuclease III
THIAE_RS09855	SM00525	THIAE_RS09855
THIAE_RS09870	SM00387	Histidine kinase-like ATPases
THIAE_RS09870	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS09875	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
THIAE_RS09875	SM00474	3'-5' exonuclease
THIAE_RS09875	SM00475	5'-3' exonuclease
THIAE_RS09875	SM00482	DNA polymerase A domain
THIAE_RS09880	SM00062	Bacterial periplasmic substrate-binding proteins
THIAE_RS09880	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THIAE_RS09880	SM00267	diguanylate cyclase
THIAE_RS09910	SM00448	cheY-homologous receiver domain
THIAE_RS09915	SM00448	cheY-homologous receiver domain
THIAE_RS09915	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THIAE_RS09930	SM00387	Histidine kinase-like ATPases
THIAE_RS09930	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS09930	SM00448	cheY-homologous receiver domain
THIAE_RS09975	SM00867	YceI-like domain 
THIAE_RS10045	SM00470	ParB-like nuclease domain
THIAE_RS10060	SM01228	THIAE_RS10060
THIAE_RS10070	SM00487	DEAD-like helicases superfamily
THIAE_RS10070	SM00490	helicase superfamily c-terminal domain
THIAE_RS10070	SM00847	Helicase associated domain (HA2)  Add an annotation
THIAE_RS10080	SM00903	Flavin reductase like domain
THIAE_RS10145	SM00954	Region found in RelA / SpoT proteins
THIAE_RS10155	SM00563	Phosphate acyltransferases
THIAE_RS10165	SM00387	Histidine kinase-like ATPases
THIAE_RS10165	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS10165	SM00448	cheY-homologous receiver domain
THIAE_RS10210	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS10210	SM00267	diguanylate cyclase
THIAE_RS10255	SM00387	Histidine kinase-like ATPases
THIAE_RS10255	SM00433	TopoisomeraseII
THIAE_RS10270	SM00387	Histidine kinase-like ATPases
THIAE_RS10270	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS10355	SM00382	ATPases associated with a variety of cellular activities
THIAE_RS10365	SM00028	Tetratricopeptide repeats
THIAE_RS10365	SM00327	von Willebrand factor (vWF) type A domain
THIAE_RS10370	SM00327	von Willebrand factor (vWF) type A domain
THIAE_RS10435	SM00477	DNA/RNA non-specific endonuclease
THIAE_RS10435	SM00892	DNA/RNA non-specific endonuclease
THIAE_RS10450	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THIAE_RS10455	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
THIAE_RS10460	SM00421	helix_turn_helix, Lux Regulon
THIAE_RS10465	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THIAE_RS10465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS10475	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS10475	SM00387	Histidine kinase-like ATPases
THIAE_RS10475	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS10475	SM00448	cheY-homologous receiver domain
THIAE_RS10485	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THIAE_RS10485	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THIAE_RS10485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS10490	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THIAE_RS10490	SM00091	PAS domain
THIAE_RS10490	SM00116	Domain in cystathionine beta-synthase and other proteins.
THIAE_RS10490	SM00387	Histidine kinase-like ATPases
THIAE_RS10490	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS10490	SM00448	cheY-homologous receiver domain
THIAE_RS10495	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THIAE_RS10495	SM00091	PAS domain
THIAE_RS10495	SM00116	Domain in cystathionine beta-synthase and other proteins.
THIAE_RS10495	SM00387	Histidine kinase-like ATPases
THIAE_RS10495	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS10495	SM00448	cheY-homologous receiver domain
THIAE_RS10505	SM00267	diguanylate cyclase
THIAE_RS10525	SM00028	Tetratricopeptide repeats
THIAE_RS10560	SM00463	Small MutS-related domain
THIAE_RS10615	SM00387	Histidine kinase-like ATPases
THIAE_RS10615	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS10615	SM00448	cheY-homologous receiver domain
THIAE_RS10620	SM00858	THIAE_RS10620
THIAE_RS10630	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS10630	SM00267	diguanylate cyclase
THIAE_RS10635	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THIAE_RS10635	SM00091	PAS domain
THIAE_RS10635	SM00116	Domain in cystathionine beta-synthase and other proteins.
THIAE_RS10635	SM00387	Histidine kinase-like ATPases
THIAE_RS10635	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS10635	SM00448	cheY-homologous receiver domain
THIAE_RS10640	SM00912	haemagglutination activity domain
THIAE_RS10660	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
THIAE_RS10660	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
THIAE_RS10675	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
THIAE_RS10675	SM00091	PAS domain
THIAE_RS10675	SM00387	Histidine kinase-like ATPases
THIAE_RS10675	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS10675	SM00448	cheY-homologous receiver domain
THIAE_RS10680	SM00091	PAS domain
THIAE_RS10680	SM00387	Histidine kinase-like ATPases
THIAE_RS10680	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS10680	SM00448	cheY-homologous receiver domain
THIAE_RS10685	SM00091	PAS domain
THIAE_RS10685	SM00387	Histidine kinase-like ATPases
THIAE_RS10685	SM00388	His Kinase A (phosphoacceptor) domain
THIAE_RS10685	SM00448	cheY-homologous receiver domain
THIAE_RS10695	SM00052	Putative diguanylate phosphodiesterase
THIAE_RS10695	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
THIAE_RS10695	SM00091	PAS domain
THIAE_RS10695	SM00267	diguanylate cyclase
