THICY_RS00015 NONE
THICY_RS00020    4324 ..    4340 +  -9.4  -5.95166   GTTAGGGTTAATAAA              CCGCAG TTAAT CTGCGG              TTTTTTTTGCTTAAC 100 57
THICY_RS00025    6352 ..    6380 +  -9.6  -5.29716   GCTTGTTATAAATAA        CCCGGTCTAGAC CTTGA GTTTAGGTCGGG        TTTTTATTATATTAC 100 83
THICY_RS00030 NONE
        moaD    7741 ..    7757 +  -3.5  -3.24245   GAAGTGGCGCTTTTT              CCACCAG TAA CCGGGGG              TTAAGTTGTGAGTAA  48 5
THICY_RS00040    8265 ..    8282 + -11.3  -5.40474   TGCTTTATCTGTCTT             TTCCCCG CTTG CGGGGAA              TTTTTTTGGCCAGAT 100 64
THICY_RS00045 NONE
        moaC   10028 ..   10054 +  -6.5  -2.62616   TGGCGGTAAAAGCGG         GCATTGGCAGC GTTAA GCTGGCAAAGC         TAGTCTAGCCAATGC  56 10
THICY_RS00090   14921 ..   14944 +  -6.6  -5.45652   GATAACGATCTTCAA          CCCTGCTTGT TTCG GCACGCGGGG           TTTTTTATTGCCCAT  89 81
THICY_RS00095 NONE
THICY_RS00100 NONE
THICY_RS00105   19274 ..   19295 + -12.3  -3.82097   TGCCAGAGGCGGCTA           CCCAGCTCG AGAG TGAGCTGGG            TTTCCTCGGTTTGAG  90 10
         rph NONE
THICY_RS00130 NONE
THICY_RS00135 NONE
THICY_RS00140   27529 ..   27546 +  -9.1  -3.71607   GCGACCATTAGCAGG             CCTGCTG CTGG CGGCAGG              TTTGGATCGTCTTGG  74 203
THICY_RS00150 NONE
THICY_RS00240 NONE
THICY_RS00245   49931 ..   49941 +  -5.4  -3.33492   TCAGCGGATACCGGC                 GGTA ATT TACC                 TTCTAAGCTGGCTGA  56 214
THICY_RS00260   53260 ..   53273 +  -3.9  -3.28791   AATTTGGAGGCATGA               TTGAA AATG TTCAA                TTCTAAAAAGACCCT  49 6
THICY_RS00265   54431 ..   54450 +  -7.8  -5.20781   CTCTCTAGCAAGAAA            GCCCGC CCCGAACA GCGGGC             TTTTCTTTTGTAATA 100 81
THICY_RS00270 NONE
THICY_RS00275 NONE
THICY_RS00280   59595 ..   59611 +  -3.6  -3.85786   TCAGCGGGCAAGCCG              GCGGCT AAGCA ATCCGC              TTTCACTGTTTTAAT  55 94
THICY_RS00295   62224 ..   62235 +  -5.8  -4.78764   CAATAATTCGGCTTC                TGGC CAGT GCCA                 TTTTTCCTCGCTTTG  78 185
THICY_RS00305 NONE
THICY_RS00310   67428 ..   67448 +  -3.3  -3.08774   AGGATTTGCAGGTAA            ATTTGCCAA ATC TTGGTAAAA            TGTTAAGAATTTATA  46 57
THICY_RS00315   68106 ..   68118 +  -2.7  -4.36592   CAACAACGCTCACGC                TTTGG ATT CTAAA                TGTTTTTTATTAAAA  60 14
THICY_RS00320 NONE
THICY_RS00325   68960 ..   68993 +  -6.1  -5.49569   TAATCTAATATTGAT    GTTGTGCCACC-GCG GTTACA CGCTGGTG-CACGAC     TTTTTTGTCTTCATA  85 49
THICY_RS00330 NONE
THICY_RS00335   70717 ..   70735 + -14.6  -4.99638   GGCGTCAATAAGTAG             CGGCCACA TAA TGTGGCCG             TTTTTATATCAGTAT 100 54
THICY_RS00340 NONE
THICY_RS00345 NONE
THICY_RS00350   73223 ..   73233 +    -4   -4.1299   ATAAAATTCATTATG                 TTTG AAT CAAA                 TTACTTTTTTTTCAC  59 49
THICY_RS00355   73935 ..   73965 + -17.8   -5.4182   TCCTAGTTCATCTTA       TAGGGGTGATAGTT TAA AACTATCGCCCCTA       TTTTTATTTGTAATT 100 48
THICY_RS00360   74846 ..   74872 +   -16  -5.03994   AGATGCACAATAAAA         CAGGGAGCTAAG TCA TTTAGCTCCCTG         TTTTTGTCTCTGGCC 100 60
THICY_RS00365   76303 ..   76327 + -11.4  -3.18383   TGTTGTTGATGAATA          CGGCCTAACG CCTGT CGGTAGGCCG          TTAATACATCCGGCT  79 55
        aroK   81856 ..   81867 +    -3  -4.08767   CAACCCGCTTCGTAT                TTTC AATC GAAA                 TTTTAGGACAGTCCA  55 52
THICY_RS00400 NONE
THICY_RS00405 NONE
THICY_RS00410   84693 ..   84704 +  -5.8  -3.86202   GAAGCTGTCAAAGTC                GCCA AAAG TGGC                 TTTGATATCATCAGC  64 396
THICY_RS00425   86544 ..   86556 +  -3.3  -2.59748   TGCTGGTCGTGCCAA                CCCAC CGA GTGCG                TAAATTATGGACATC  43 10
         cca   87802 ..   87817 +  -6.2  -3.18264   TTAGATGAACATGAG              GCTTAA ATGA TTAAGC               TTGGTCCCTGGCGGG  57 20
        fieF   88714 ..   88752 +  -3.9  -3.54424   GACCCCCAACATCAT  CAATGGGGTCGTGATT AATTAGCC AATCACG-CCCCAACG   TTTAAGGACATAAAC  51 8
THICY_RS00440 NONE
THICY_RS00445   93220 ..   93233 +  -5.2  -3.53012   TCGGTTATAAAGACC               CCGG TATACC CCGG                TTTCAAACACCCCCG  56 134
THICY_RS00450   95342 ..   95357 +  -6.8   -4.2828   GGCCCGACTGAAAAC              TCGGCA CTTG TGCCGG               TTTTCCTCAATAGGA  73 81
THICY_RS00455 NONE
THICY_RS00460   97586 ..   97610 + -20.1  -3.48276   ACACAAAGTACTAAT          CCAGGCCTGCT GTT AGCAGGCCTGG          TTCTATCAACAAACA 100 44
THICY_RS00465   99297 ..   99309 +  -4.8  -2.75957   CTAAAAAAAGGAGTA                TCGC ATATG GCGA                TGATTACACTTCGTG  50 72
THICY_RS00470  100417 ..  100433 +  -4.4   -5.4505   TGCTGCCACCAAAAA              CTCGAA CTTGT TTCGGG              TTTTTTATTAGCAAC  83 75
THICY_RS08555  101744 ..  101759 + -11.8  -5.14563   CCTAACGGCTAAAAA              CCCCGC CCCG GCGGGG               TTTTTTAATCCCCAA 100 85
THICY_RS00505 NONE
THICY_RS00510 NONE
THICY_RS00515 NONE
THICY_RS00520 NONE
        trpD NONE
        trpC  110507 ..  110540 + -21.9  -4.01381   AAGCTGTGATGATTA     GCAGGCCTGGTTGAG CATT CTTAACCAGGCCTGC      TTATTTGGGTTAGGT 100 32
THICY_RS00535  111021 ..  111034 +  -3.1  -3.55783   ACGGCGCACTGATTA               TTTGC GTGA GCGAA                TTATGCTTGCATTTT  51 29
THICY_RS00540 NONE
THICY_RS00545  112439 ..  112449 +  -3.2  -3.54109   CGTTACCACGCTATA                 TTGC CGA GCAG                 TTATAGTTAAGTTGC  49 9
THICY_RS00555  114022 ..  114033 +  -2.2  -2.67143   CACCCTCCACCAATA                TACC TGCG GGTG                 TCGTATAATGGCTAT  40 29
THICY_RS00560 NONE
THICY_RS00565  114206 ..  114218 +  -9.1  -2.56715   AGCTCCATTTTTAGG                CTGGG GTG CCCAG                TCAATTAGTAACGCT  67 34
         tuf  115462 ..  115478 +  -8.7  -5.81622   TTGCAAAAATTAAAA              GGGACTG ATA TAGTCCC              TTTTTTTAATTTTCT 100 48
THICY_RS00575  115579 ..  115603 +  -7.1  -5.98781   CCTGCCAAATTTTAA          CGGTCTGTATC CAA GGTGCAGGTCG          TTTTTTTTAATTGTA 100 34
THICY_RS00580 NONE
THICY_RS00585  116560 ..  116573 +  -3.7  -3.02511   GATTTTTTTAACGGG               GAGCC GCAA GGCGC                TATTACCCAACTAGG  47 39
        rplK NONE
THICY_RS00595  117849 ..  117871 + -12.2  -3.33261   CTACGTAGATGAGTA           GTTTAGTTAC ATC GTAACTAAAC           TTATGGAGGTTAGAA  89 152
THICY_RS00600  118365 ..  118375 +  -2.4  -2.95779   AGCTTACAAAGAGTC                 ACGC GAA GCGG                 CTTAATTTTTTGCAT  42 10
        rplL  118824 ..  118845 +  -8.7  -4.94487   AGCTGCAGTGAAAAT           GGCTGACAT TTCG GTGTCGGCC            TTTTGTGTTTTATCA  91 61
        rpoB NONE
THICY_RS00615  127313 ..  127339 + -10.3  -3.69094   AAAATTCTGAAACCC         TGTTTGTGGGT GTTAA ACTCACAAACA         TTTGGCTAATGAGTT  81 84
THICY_RS00620 NONE
THICY_RS00625  128294 ..  128316 + -11.3  -3.91716   GTTGGTAATTCACTA           CAAGGGCCC TTGAT GGGCCTTTG           TTCTTTCAAACATCA  86 33
        fusA NONE
         tuf  131718 ..  131738 + -13.3  -5.51612   TCCGCAACCTTATTA            GCAGTAGGC TTA GCCTGCTGC            TTTTATTTTTTCTAT 100 75
        rpsJ  132063 ..  132076 +  -3.1  -2.60723   TGCTGGTGTTGATGT               GCAGT TGGA ATTGC                GTTAATTAGCGATAG  43 7
        rplC NONE
        rplD NONE
        rplW NONE
THICY_RS00660 NONE
THICY_RS00665 NONE
THICY_RS00670 NONE
THICY_RS00675 NONE
THICY_RS00680 NONE
THICY_RS00685 NONE
THICY_RS00690  136779 ..  136820 +  -3.8  -5.16133   ATTTTTGTTTTTTCA CCGCTGATGTAACTA-AGCC AAAT GGAACTAGTTACG-CAGCGG TTTTTGTGTTATCAT  73 47
THICY_RS00695 NONE
        rplX  137551 ..  137569 +  -3.1  -3.20901   TTTCAAGTCAACAAA             TAAAGCG GTTGA CGCTTAA             TTGGATTGGTGAAAT  46 7
THICY_RS00705 NONE
THICY_RS00710 NONE
THICY_RS00715 NONE
THICY_RS00720 NONE
THICY_RS00725 NONE
THICY_RS00730 NONE
THICY_RS00735 NONE
THICY_RS00740 NONE
        secY  142235 ..  142247 +  -3.5  -4.23647   AATTTAAAAGGACGA                TAAAT AGT ATTTA                TTTATTGACTAGTTT  60 23
THICY_RS00750 NONE
THICY_RS00755 NONE
        rpsD NONE
THICY_RS00765 NONE
        rplQ  145155 ..  145168 +  -9.5  -5.60993   CAGAGTGATCAAAAG               CCGGC GTAA GCCGG                TTTTTTTATACCCAA 100 33
THICY_RS00775 NONE
THICY_RS00780 NONE
THICY_RS00785  147884 ..  147899 +  -6.2  -4.09685   TTCGCGTGGGCGGAC              TAACCA GGCC TGGTTA               TTTTGCACCATCACC  66 138
THICY_RS00800 NONE
THICY_RS00805 NONE
THICY_RS00810  151725 ..  151745 +  -2.5  -4.21194   GAGTGGTTATCTATT            TCAAGGTTA TTT TAACCAGGA            TTTTAGATAGTAACC  58 63
THICY_RS00820  155388 ..  155399 +  -5.8   -2.7067   TTCAAGGCAAATTTT                CCAG TATA CTGG                 CGTTTTTGATTGGCT  54 43
THICY_RS00825 NONE
THICY_RS00830  156146 ..  156156 +  -4.6  -4.55128   AGGCCGCGCAGTAAT                 CTCG TCA CGGG                 TTTTCCTTTCACGGT  68 27
THICY_RS00835 NONE
THICY_RS00840  159667 ..  159691 +  -3.6  -3.14132   ACATTACAGTTTTGG          CTTAAGCATG TTTTT CATGGTTAGG          TTGATGACAAAAAGG  48 158
THICY_RS00845 NONE
THICY_RS00850  161806 ..  161820 +   -10  -3.08706   GCAGCAGCGGCTTGT               GCAAGC TTG GCTTGC               TGTTGAGCTATGGTT  69 141
        rplU  163316 ..  163333 +  -2.7  -3.17075   ATTATTTTTCTGATA             CTATTGC GTTA GTGATAG              TTAAGTTAACAAGAG  44 48
        rpmA  163651 ..  163677 + -15.2  -5.52096   GCTGTGCTAAAATGA         CGCCTCGTACTT TTA AAGTGCGGGGCG         TTTTTTATTGGATTT 100 55
        obgE NONE
THICY_RS00875  165925 ..  165935 +  -5.4  -2.64126   AAACTATAGGGTAAC                 GGTT TAA AACC                 CTTGTCCATCTGGTT  51 40
THICY_RS00880  167401 ..  167415 +  -2.7  -4.84359   GGGATTGCGGAAACT               GCCCG AGCCA CCGGC               TTTTTCTGCGGCTAG  71 112
THICY_RS00895  170921 ..  170933 +  -2.6  -3.35813   GTGAAGACGATATTA                TCGC TATTC GCGG                TTAATTCAAGTGCAA  46 9
       groEL  172638 ..  172663 + -13.3  -5.79595   CGCTGAGTAAACCAA         CCCTGGTCAGT ATAT GCTGGCCAGGG          TTTTTTGTTTTAGAG 100 57
THICY_RS00905  173766 ..  173778 +  -4.8  -3.08015   GAGAAAATGGGTCTT                GAGC ATGTC GCTC                TATTACCCTAATTAC  52 2
THICY_RS00910 NONE
THICY_RS00915  175637 ..  175647 +  -2.6   -4.1964   AGATTGCAGTTGGGA                 TTAA ACA TTAA                 TTTTAGGATATTGAA  55 168
THICY_RS00920 NONE
THICY_RS00925  176521 ..  176534 +  -9.5  -6.32017   TTCAGATATGTAAAA               CCCGC TTTA GCGGG                TTTTTTTTGTTTGTT 100 52
THICY_RS00930  177264 ..  177278 +  -5.6  -3.19026   GAAGTAAGTAAATCG               CGCCTT TAA ATGGCG               TTAAGTCTTGGGGTA  52 234
THICY_RS00970 NONE
THICY_RS00975 NONE
THICY_RS00980  186701 ..  186719 +  -5.2   -3.0644   GAAACTGCGACACCT             TCTACCTG AGC CAGGTCGG             TGTTGAGCGTTAAGT  51 368
THICY_RS00995 NONE
THICY_RS01000 NONE
THICY_RS01005 NONE
        sufC NONE
THICY_RS01015 NONE
THICY_RS01020 NONE
        murC NONE
THICY_RS01030 NONE
THICY_RS01035 NONE
THICY_RS01040 NONE
THICY_RS01045  199959 ..  199977 +   -11  -5.54264   TTGCTAGAGGTAACT             TGCTCGCT TAA GGCGAGCA             TTTTTTTGGCTGTTT 100 91
        secA NONE
        argJ  204407 ..  204418 +  -3.6  -3.12505   TATGTCAAGATTAAT                GCGG AGTA TCGC                 TCTTAAATGTCCGGT  48 8
THICY_RS01065  205544 ..  205562 +  -3.8   -4.4634   GGTGAGCGTTGATCA             CGCAGC TGGACAC GTTGCG             TTTGTTGTTCAGGTT  65 185
THICY_RS01080 NONE
THICY_RS01085  208803 ..  208816 +  -3.8  -3.81948   GCGACTTCATTTTAT               TGCG TTCTGC CGCA                TGTTTTATAAAGTTC  57 276
THICY_RS01100 NONE
THICY_RS01105  212980 ..  213009 + -16.7  -3.07113   TTAAAATTAATCCAA       TAAAAAACCCGGA AACT TCCGGGTTTTTTA        TTGAGTCAGATAATA 100 68
THICY_RS01135 NONE
THICY_RS01140 NONE
THICY_RS01145 NONE
THICY_RS01150 NONE
THICY_RS01155  221818 ..  221828 +  -2.6  -2.74144   AATTGACATTCCGTA                 TTTA TCG TAAA                 CTTTAGCCATACAAG  42 54
THICY_RS01160  223413 ..  223432 +    -5  -4.36914   AGAAACGGTATAGGT            GACAATTG TCGT CCATTGTC             TTTTCTGAACAAAAC  67 28
THICY_RS01165 NONE
THICY_RS01170  224780 ..  224792 +  -4.8   -2.7563   ATAAGGAAACCCTGT                TGCC AATAA GGCA                TCCTTAAGACTTTTT  47 364
THICY_RS01180 NONE
THICY_RS01185 NONE
THICY_RS01190 NONE
        iscA  227732 ..  227744 +  -6.3  -3.03619   AACCCATCCAATGAA                CTCAT TTT ATGAG                TCTTAACCCATAGTT  56 39
THICY_RS01200 NONE
THICY_RS01205 NONE
THICY_RS01210  229792 ..  229808 +  -2.3  -3.79687   TTTTTTAGTTATTTT              TAAATCC AGA GTATTTA              TCTTTTATGGCAACT  50 23
THICY_RS01215 NONE
THICY_RS01220 NONE
THICY_RS01225 NONE
THICY_RS01230  234401 ..  234428 +  -7.8  -4.64657   CAAGTATGTAATAGA        GCATCTCTTAAA TGAA TATAAGAGGTGC         TTTTTAACCCTTTAA  83 55
THICY_RS01235  238770 ..  238789 + -13.6  -3.54459   TTCACAAAGTAAAAA            CCGCCTGT TAAT ACAGGCGG             TTTAGCGGCGATTAA 100 465
THICY_RS01265  242826 ..  242836 +  -6.8  -3.63655   AAGGTAATTTTGTTT                 CGCA AAT TGCG                 TTAATTTCGTTATAA  65 93
THICY_RS01270  244628 ..  244638 +    -4  -2.95116   TTTTGGTGTAAGTCT                 TATG AAA CATA                 TAATTTCGATGCTCA  47 30
THICY_RS01275  245136 ..  245166 +  -9.1  -3.56325   CCACATCCTAGCAAG       CCTGGTCTTAAGC AATTC GTTTGAGACTAGG       TTATAATTGTCCAAA  74 41
THICY_RS01280  246259 ..  246286 + -15.8  -2.96722   TTTATCCGCTGATAA        TAAAAAGGCTCC TTAT GGAGCCTTTTTA         ATTTATACCTCTAGG 100 49
THICY_RS01295  253915 ..  253965 +  -4.1  -2.99871   CAGGCCTGGTTAATG GCAGGCCTGCTGATGAAGCCGTTTT ACA AAAACGGGTTCA-CAG-AGAACGGC TGATTTAATCTACGC  47 58
THICY_RS01305 NONE
THICY_RS01310 NONE
THICY_RS01315 NONE
THICY_RS01320 NONE
THICY_RS01330 NONE
THICY_RS01335  260889 ..  260906 +  -5.5  -2.92499   GACAATGTAAGTATA             GGTAGAG GTAA CTCTTCC              ATGTTTCTTTGTCAA  53 382
THICY_RS01340  262471 ..  262487 +  -4.3  -3.53012   GCCCTATCGGAAGGT              GGGGCTG GAT CACCTCC              TTTAAGACGAAGCGG  53 1
THICY_RS01345  262654 ..  262666 +  -4.8  -2.61582   TCGAATCCACCCAGA                CCCA CCACA TGGG                GTTATAGCTCAGCTG  49 19
THICY_RS01350  262747 ..  262796 + -13.1   -5.3798   CTCCACCAATAAACA CCGCTCATGGTGTTTTGGTTGAT GAAA ATTAGCTAAGAAACTATGAGCGG TTTTTATTGTTATTA 100 33
THICY_RS01355  266211 ..  266224 +  -3.1  -2.60075   GGGTGTGGCGACACA               TCAGGC AAA GCC-GA               ATTGCTTGGCGACCA  43 137
THICY_RS01360  266358 ..  266373 + -10.4     -6.13   GCTCCACATCCTAAA              CCCCTC TAAT GAGGGG               TTTTTTTTTGCCTAT 100 39
THICY_RS08570 NONE
THICY_RS01370  268118 ..  268128 +    -4  -3.16618   AATTTCTGCTAATTT                 TGTT TAA AACA                 TATTGACTCTTAATT  48 45
THICY_RS01375 NONE
THICY_RS01380 NONE
THICY_RS01385  270160 ..  270178 +  -7.4  -5.07053   AATAATCTGTCTATA             GCGGTG CTCAACA CACCGC             TTTTTTGGACTACTT  85 74
THICY_RS01400 NONE
THICY_RS01405 NONE
        rsmD NONE
THICY_RS01415  276082 ..  276095 +  -2.4  -3.66772   GACGGCGGGCAATCT               CATC CCAATC GATG                TTATTACAGGTTTCA  50 95
THICY_RS01425 NONE
THICY_RS01430  278521 ..  278547 +  -9.4  -5.64421   GTGCATAGTTCAAAA         GCGAAACCGATT TAT AACCGGGTTCGC         TTTTTTATTTGGAAT 100 154
THICY_RS01435 NONE
THICY_RS01445  281578 ..  281610 +  -4.8  -2.75415   CGCCTCTTTTATAAA      TTTGCCGCGATGGT TTAGC ATCATCGCCGCCAG      CATTTGTTTTTCTTG  47 292
THICY_RS01460  286408 ..  286419 +  -2.2  -3.73775   AAAAATAAAGAATCC                TGAG GTAG CTCG                 TTTGATCACAGTCGC  50 146
THICY_RS01465  288219 ..  288245 +  -3.1  -2.96366   GGCTGCAGGCTATGT        GGTGGTTTTAAC TAAG GATAAAAC-ACC         GTTTAATTAACTGTA  45 15
THICY_RS01470  289124 ..  289139 + -10.4  -6.11644   AATGGCATAAAATAA              CGCTCC GTAA GGAGCG               TTTTTTTTTCAATCA 100 61
THICY_RS01475 NONE
THICY_RS01480  377441 ..  377469 +  -2.5  -4.07568   GACTAGCGTGACAGG        CAACTTAAAAGTT TAT GAGTTTTAAGGTG        TTTTAACAACAAGGG  55 35
THICY_RS01485  378172 ..  378186 +  -8.6  -2.65789   TTTTCGTAGAAGGCG               GATGTC GCT GACATC               ATTAATTGATGTCAT  67 41
THICY_RS01490 NONE
THICY_RS01495 NONE
THICY_RS01500  379889 ..  379902 +  -5.2  -3.35992   CAGTCGGTTAATAAC               GGCC AGCTGG GGCC                TTGATTGGAATCACT  54 395
THICY_RS01520  382668 ..  382680 +  -4.8  -3.15249   TATCGCCAAAAAAGC                GTCG TGCCT CGAC                TTGATAGCCCATGTC  50 145
THICY_RS01530 NONE
THICY_RS01535  386199 ..  386212 +  -5.9  -3.60792   AGACCGACCGCGTGC               GCCGG TTCG CTGGC                TTTAAAAATTAACGC  59 279
THICY_RS01550 NONE
THICY_RS01555  391034 ..  391053 +  -6.4  -4.22883   GCCAATAAAATGCCA            CTGCGCAT CGGG ATGTGCGG             TTATTTTGGGTAGTG  71 490
THICY_RS01565 NONE
THICY_RS01570 NONE
THICY_RS01575  393829 ..  393852 +  -9.6  -3.90744   CATTTCTTCAAAGGG          CAGTTGGCCG TGGC TGGCCAATTG           TTGTTTAAACGCCCA  79 200
THICY_RS01595 NONE
THICY_RS01600  398572 ..  398587 +  -8.2  -2.95204   TTGTTGAGTAGCGTG              CCTGGG TTAA CCCGGG               GTTGTTTCGGAATGC  63 478
THICY_RS01625 NONE
THICY_RS01630 NONE
THICY_RS01635  404587 ..  404603 +  -2.1  -2.89655   GGGTGTCTATATTTA              GGTGCGA CTT TAGCCCC              GGTTTTTTTGGCGGG  40 137
THICY_RS01685 NONE
THICY_RS01690 NONE
THICY_RS01695  415882 ..  415921 +  -7.3  -2.64274   AATTATCAGTGATTT TTGGGTTTGGCAGGCCTGT TCAA ATA-GCC-GCCAAGCCCAG  TCGCTTTGACCGAGT  56 469
THICY_RS01780  471406 ..  471423 +  -4.2  -2.88215   TAGAACCAAATAAGT             CGAATT TGTGAT AATTCG              TGATATTTAGTGATA  48 79
THICY_RS01785  472205 ..  472221 +  -2.9  -4.21631   AGCTGACACCAAATC              TGTGCAT TAA AAGCACG              TTTATTACATCGGTT  58 16
THICY_RS01790 NONE
THICY_RS01795 NONE
THICY_RS01800 NONE
THICY_RS01805  486165 ..  486193 +  -3.8   -3.7948   ATCGTATTCGTATGT        GGTTGTGGTGGT AAGCG ATGGCCGCAACC        TTTAGTGAGTCTTGG  55 12
THICY_RS01810  488310 ..  488323 +  -3.1  -2.86271   AGTTGTTACAACAAC               GCTTT AAGC AAGGC                TAGTTATGCTGCGAG  44 9
THICY_RS01815  490291 ..  490311 +  -9.7  -4.24294   ACGAGTTAAAAAAAA            GGCCAGCAT TAA ATGCTGACC            TTTTAGCTGGTTACT  86 32
THICY_RS01825 NONE
THICY_RS01830  497224 ..  497234 +  -3.2  -4.65895   TAAGTAGTCTGGGTT                 CGCA CTG TGTG                 TTTTTACCTGAAGAG  66 431
THICY_RS01845  500361 ..  500377 +    -8  -5.95539   CTCTCCATTATTTAA              CTCAGC CTTGT GCTGAG              TTTTTTTATTTAGGA 100 49
THICY_RS01850 NONE
THICY_RS01855 NONE
THICY_RS01860  504722 ..  504741 +  -6.4   -3.0264   CAGCTCATCATCCAA            TTGACGGC CTAA GCCTTCAA             TATTAAGCAGGGTTT  55 414
THICY_RS01890  509967 ..  509979 +  -4.7  -2.98493   GCCACAGACGCTGGG                CCACG GAT CGAGG                TAATTTGATGATCAC  51 5
THICY_RS01895  511072 ..  511085 +  -5.3  -2.96979   GGCCTTTTTCAATCA               GCTAA AAGA TTAGC                TATACTTAATATTAA  53 13
THICY_RS01900 NONE
THICY_RS01905 NONE
THICY_RS01910 NONE
THICY_RS01915  514419 ..  514430 +  -2.2  -4.14859   CATACTTAGCCAGGT                CTTC TGCC GAGG                 TTTGTCCTTGTTGAT  57 204
THICY_RS01930  519414 ..  519429 + -11.8  -5.08824   TCATAACGCACCCAA              CCCCGC ACAC GCGGGG               TTTTTTACATCAAAA 100 70
THICY_RS01945  523602 ..  523614 +  -4.1  -2.94464   ATGATAGTAAGTGGC                GGGAT ATT ATTCC                TATAATGTTGATATT  47 244
THICY_RS01950 NONE
THICY_RS01955  524877 ..  524887 +    -4  -3.51202   GTTGGTTCGCTCGGT                 TTTG CCA CAAA                 TTACTTAATTTAATG  51 128
THICY_RS01960 NONE
THICY_RS01965  525978 ..  525994 +  -5.1  -3.63782   CCGTGTTGGCCGAGG              CGTTTGC GCG GCAGATG              TTTAAAGTCGTCTTG  59 237
THICY_RS01985  531095 ..  531125 +  -8.2  -4.56729   TTTAATGCAATTTTA       CCCCATCCGGCT ACTAGCA GGCCTGGTGGGG       TTTTGCTGTTTTAAT  86 66
THICY_RS01990  532239 ..  532255 +  -2.2  -4.11692   CCTTGTTATTACAAC              GCCG TAATCGTGT CGGC              TTTTAGGGGTAAGTG  54 3
THICY_RS01995  533204 ..  533216 +  -9.1  -2.63501   GCGCACAGAACGCGT                CCACC GTT GGTGG                TGACTTCATTATTGG  63 173
THICY_RS02045 NONE
THICY_RS02050  544374 ..  544390 +  -3.8  -2.74012   CGTCACGCCCGCGGG              CTTTTT TCAAC AAAAAG              TGATTGAGCTGGTCG  44 349
THICY_RS02060  546667 ..  546685 +  -5.2  -3.19602   TCATTGCAACCGGTG             GCGGATTA GCA TGAGCCGC             TCTTGGTGTGACAGG  52 17
THICY_RS02070 NONE
THICY_RS02075  548137 ..  548163 +  -7.4  -3.55815   CAAAGTTTATACAAG        TCGTTTGGTGC CGGAAT GCACCAA-CGA         TTTGAAACCGTGTTT  67 67
THICY_RS02105  552871 ..  552887 +  -6.7  -2.71924   AGTTTGCAGCGGTGT              TGTTTAA TGC TTAAACA              CTTTCCACGCGGATA  56 157
THICY_RS02135  557375 ..  557388 +  -2.3  -2.57974   TAAAGGGCAGTTAGC               GCATG ATAA CAAGC                TGGATTGGTGATGGT  40 1
THICY_RS02140  558763 ..  558775 +  -5.5  -3.76492   TGCCAACACAGGGTG                GCTCG AAC TGAGC                TTTGGTGCGATTGGC  59 73
THICY_RS02190 NONE
THICY_RS02195  570729 ..  570751 + -11.3  -2.52464   GACGTTAAAAAAGGA           TCGCCTGCC CAGTT GGTAGGCGA           TCGGTTGAAAGAAAA  78 44
THICY_RS02220  574390 ..  574411 +  -5.1  -4.87665   AGTGAATCTTCATAT           CAGCCAGCAG GTA CT-CTGGCAG           TTTTTCTACATCGCG  78 114
THICY_RS02230 NONE
THICY_RS02235 NONE
THICY_RS02240 NONE
THICY_RS02245 NONE
THICY_RS02250  581070 ..  581088 +    -3  -2.50913   CGATTGAGTTAATCG             GTGCCGAC CAC GTCCGAAC             ATAATTTTAATGTTT  41 3
THICY_RS02255  581675 ..  581712 +  -4.8  -4.42788   TCTAGCGGAAACGAA   CCAAGCCTGATCGGTAG ACTAC CAACC-AGCAGGCCTGG   TTTTGTGAGATTAGG  67 270
THICY_RS02280  585604 ..  585618 + -12.8  -5.60993   GAGTGGCTTTAAAAA               GCGGGC ATT GCCCGC               TTTTTTTATGCCAAC 100 55
THICY_RS02295  587632 ..  587647 + -10.4  -4.28254   AAGGTAAATAAAAAA              GCCAGC GTAT GCTGGC               TTTTAAATATTGGCA  87 30
THICY_RS02305  589804 ..  589830 +  -5.9  -4.49041   TTACTGATTTTTATG        GCCGA-CCGA ATAACCTC TCGGTTCGGC         TTTACTTTTTTATAT  72 49
        guaA NONE
THICY_RS02315  591858 ..  591879 +  -2.1  -3.10597   CCTGCCCAGTGGGCC           TCGACCAGC CTGA GCAGGATGA            ATTTTGGATGCAGAA  43 64
THICY_RS02320 NONE
THICY_RS02325  594520 ..  594539 +  -8.6  -6.23209   GTCTTTATGGCAAAA            CCCAAGTT GACC GACTTGGG             TTTTTTTTTGCTTAG 100 188
THICY_RS02340  597071 ..  597083 +  -4.1  -4.87291   GGTCGAAGTGACGCT                CTAGC TTT GTTAG                TTTTTCGTTAACGTA  74 380
THICY_RS02375 NONE
THICY_RS02380 NONE
THICY_RS02385 NONE
THICY_RS02390 NONE
THICY_RS02395 NONE
THICY_RS02400 NONE
THICY_RS02405 NONE
THICY_RS02410 NONE
THICY_RS02415 NONE
THICY_RS02420 NONE
        hisG NONE
THICY_RS02430 NONE
THICY_RS02435 NONE
THICY_RS02440  611450 ..  611462 +  -2.7  -3.36785   CTCCGAAGAGTTAAC                TGGAT AGA ATCTA                TTAATTGCAGTATAA  46 61
THICY_RS02445 NONE
THICY_RS02450 NONE
THICY_RS02455  614088 ..  614130 + -17.3  -2.51969   AGTAGTTAGAATTTA ACTGCCATAAAAAA-CCCGC CTCG GCGGGTTTTTTTATGGCAGG ATGTTCAATTATTAC 100 36
THICY_RS02460  615583 ..  615604 +  -3.7  -4.38712   CCATTAGGCTAGGGC           TGGTC-GCTG CAA CAGCCGATCG           TTTTATGAGGCTGGG  63 68
THICY_RS02480  620074 ..  620109 +    -4  -4.53439   GGGTATAATCCGCGA    TTTCTAATTCCCGCTT TTAA AAACGGGTATTAGTGA     TTTGTTTAGCTTTAG  66 87
        rpsP NONE
THICY_RS02490 NONE
        trmD  621743 ..  621756 +  -5.3  -3.05384   AAGTAACCATGGTCC               TCATG TGAT CATGA                TTCCCTCGGAGAAAA  53 112
THICY_RS02500  622151 ..  622166 +  -7.5  -5.60993   TGATGAAAAATAAAA              CCGCC CATGTT GGCGG               TTTTTTTGTACCCGG 100 55
THICY_RS02505 NONE
THICY_RS02510 NONE
THICY_RS02515 NONE
THICY_RS02520  625422 ..  625452 +  -5.5  -3.56347   TGCTCAAATTGAACA      GCAGGGATAATTGG ATTA TCAACT-TCCCTGC       TCTTATTTAGCGTGT  59 16
THICY_RS02540  630321 ..  630331 +  -2.6  -3.19389   GATAGGTTTGGTGAA                 TAAT TAG ATTA                 TTGGTAAGTAAATTA  44 19
THICY_RS02545 NONE
THICY_RS02550  631992 ..  632009 +  -4.1  -3.41689   GGTGACACAATGTTA             TCAGGCT TTTG AGGCTGA              TTAATGTGTATTTTA  51 4
THICY_RS02555 NONE
THICY_RS02560  635937 ..  635957 +  -6.9   -4.0075   AGGTATAAAAACCTC            GCCCAAAAT CAG ATTTTGGAC            TTTACTTCATTGCGT  72 33
THICY_RS02565 NONE
THICY_RS02570  636252 ..  636284 +   -10  -5.75945   CAGGCGCGCCATCTT      CAAACCCTAGGTTA TTGAT TAACCTGGGGTTTA      TTTTTTTTAAAGCCT 100 30
THICY_RS02580  638100 ..  638110 +  -2.6  -4.65933   CTTCGATTTTGCCGA                 TATA GTT TATA                 TTTATTTTAGAAGTG  62 41
THICY_RS02585  639919 ..  639933 +  -2.8  -3.94402   GCTAGTTAATATCTT               CTCAAT TCG GTTGGG               TTGTTTCGGAGTTGT  53 32
THICY_RS02590 NONE
THICY_RS02595 NONE
THICY_RS02600 NONE
THICY_RS02605  644453 ..  644470 +  -2.6  -2.67209   CTATGAAACCTAATA             CATGCG ATTATC CGCAGG              TAATGTGAGTTAATG  41 48
THICY_RS02610 NONE
THICY_RS02615  646639 ..  646655 + -13.7  -5.75342   CACGTTAATGAAGAA              GGTGGGG ATT CCCCACC              TTTTTTTTGGAACAC 100 33
THICY_RS02620 NONE
THICY_RS02625 NONE
THICY_RS02630  649425 ..  649454 + -17.9  -4.33621   TGGGACTTAAGAAAA       CCCCGCTCCTTCA ATAA TGAGGGGGCGGGG        TTTCTTCATTGGGTG 100 54
THICY_RS02645 NONE
THICY_RS02650  653572 ..  653590 +  -3.2  -2.67428   ACAAAAAATTATCAA             GATTAACA ATT TGTTAATG             TAAGTTGTTAATAAA  43 40
THICY_RS02655 NONE
THICY_RS02660  656947 ..  656960 +  -9.5  -5.64274   ACCAAACACCCTAAG               CCCGC AACT GCGGG                TTTTTTTATAGCTAC 100 417
THICY_RS02665  657748 ..  657760 +  -4.9  -3.75332   GCAAGCTTTCACCGA                GTATA AAA TATAC                TTTGAGTTGACCGCT  57 292
THICY_RS02690 NONE
THICY_RS02695  667253 ..  667271 +  -3.1  -3.25072   GTTCGAGTCCTGCTG             GGCGT ACCATTTAA ACGCC             TTACATTATGGTGAC  48 17
THICY_RS02700  667432 ..  667442 +  -6.8  -2.81786   GTATTTTGACAATAA                 CACC CTT GGTG                 ATTATGTTGAGTATA  57 100
THICY_RS02705  669007 ..  669023 +  -5.9  -3.66874   AAGATAAAATATAAA              CCAATTT ACT AGATTGG              TTTAAATAAAATTAA  62 513
THICY_RS02710 NONE
THICY_RS02715  670799 ..  670811 +  -3.3  -3.05522   TAGTGGAGTGAAAAT                AGGCT GTT AGCCA                CTTTTCAAGACATTA  46 99
THICY_RS02720  671448 ..  671477 +  -5.1  -3.14982   CCAAAGTGTAAACAT       CCTCTAGTTAATGC CAT GCATTT-TTAGAGG       TCTGTTCGTGCGTTT  52 378
THICY_RS02730 NONE
THICY_RS02735  677455 ..  677471 +  -8.1  -3.32268   GTTATTTTTGTAATT              TATCTCA AAG TGAGATA              TTATGAGAATCATTA  70 123
THICY_RS02740 NONE
THICY_RS02745 NONE
THICY_RS02750 NONE
THICY_RS02755  680266 ..  680282 +  -6.5  -4.14511   GAAGAACTGGCAACA              GCGCG ATAAAGA CGCGC              TTTTGAGATGACCTT  71 134
THICY_RS02760 NONE
THICY_RS02765  684259 ..  684282 +  -5.4  -2.74286   GGCTTCTTAGCCAGT          CTTATTTAAC ATCG GTTAAGTAGG           TCATTACGGATTATT  52 3
THICY_RS02770  685890 ..  685900 +  -6.8  -3.32832   AAGCTCATTAACCAC                 CAGC GCA GCTG                 TTGAGTATTTTTAAC  59 119
THICY_RS02780  687699 ..  687715 +  -5.1  -2.65942   GATAGAAGCTTACGT              CCAACAA AAT TGGTTGG              GTGTTTAGATCTGAC  49 1
THICY_RS02785 NONE
THICY_RS02790  690651 ..  690664 +  -5.3  -5.09259   TTTAGTGCTGTATTA               TCACA TGCA TGTGA                TTTTATTTTAAACTA  78 284
THICY_RS08580  692184 ..  692214 + -15.5  -3.11709   CAAATCCTGTCGCTA       CCAGGCCTGTTCT CGCTA GGAGCAGGCCTGG       CTTTGCTTTATATTA 100 115
THICY_RS02800 NONE
THICY_RS02805 NONE
THICY_RS02810 NONE
THICY_RS02815  697650 ..  697667 +  -4.1    -4.386   CAAATCGTCGTCTTC             CAGCTCT TTGC ACAGCTG              TTTTATAGCAGGTTC  65 386
THICY_RS02825  699096 ..  699107 +  -7.2  -2.54371   ATCTCTCCAGTTGTA                CGGG GGTG CCCG                 TGCATTACCCTGATT  59 40
THICY_RS02830 NONE
THICY_RS08585 NONE
THICY_RS02840 NONE
THICY_RS02845 NONE
THICY_RS02850  705325 ..  705336 +  -5.8  -4.11484   GTCTTCAATAATGCC                CCGA GTAT TCGG                 TTTTAACAGGTTGAG  66 504
THICY_RS02860 NONE
THICY_RS02865  706724 ..  706739 +  -3.2   -2.7186   GCACCTTAACAGCTG              CTAACC CATC GGTCAG               TGGTTGCCCAAATTT  43 47
THICY_RS02870 NONE
THICY_RS02875  711373 ..  711387 +  -2.1  -4.18802   TTAGTGCTGCTAATA               CCTGT TCGCC ATAGG               TTTTAAAGTCTGTGT  57 310
THICY_RS02885 NONE
THICY_RS02890 NONE
THICY_RS02895  714359 ..  714370 +  -7.2   -2.6472   ACCCACATTGGCGTT                GGCC AGCA GGCC                 TGCTATGGGGTCTTC  56 165
THICY_RS02915  717855 ..  717865 +  -2.4  -5.08088   CTCAACTTGCGTGCG                 AGCC CAA GGCG                 TTTTTCTTAAGAATT  73 112
THICY_RS03015 NONE
THICY_RS03020  736131 ..  736148 +  -5.5  -3.40597   CAAAACTGGTGTTAT             CGCGTTA AGGT TGGCGCG              TGTTTAAATCGCCAA  57 18
THICY_RS03025 NONE
THICY_RS03030 NONE
THICY_RS03035 NONE
THICY_RS03040 NONE
THICY_RS03045  739435 ..  739449 +  -5.7   -3.4252   ATATTTTGTGGCTCG               GCATC ACGAC GATGC               TTGTACTCAATCAAC  57 136
THICY_RS03055 NONE
THICY_RS03060  743682 ..  743699 +  -5.5  -2.92499   GACAATGTAAGTATA             GGTAGAG GTAA CTCTTCC              ATGTTTCTTTGTCAA  53 375
THICY_RS03065  745264 ..  745280 +  -4.3  -3.53012   GCCCTATCGGAAGGT              GGGGCTG GAT CACCTCC              TTTAAGACGAAGCGG  53 1
THICY_RS03070  745447 ..  745459 +  -4.8  -2.61582   TCGAATCCACCCAGA                CCCA CCACA TGGG                GTTATAGCTCAGCTG  49 19
THICY_RS03075  745540 ..  745589 + -13.1   -5.3798   CTCCACCAATAAACA CCGCTCATGGTGTTTTGGTTGAT GAAA ATTAGCTAAGAAACTATGAGCGG TTTTTATTGTTATTA 100 33
THICY_RS03080  749005 ..  749018 +  -3.1  -2.60075   GGGTGTGGCGACACA               TCAGGC AAA GCC-GA               ATTGCTTGGCGACCA  43 137
THICY_RS03085  749152 ..  749167 + -10.4     -6.13   GCTCCACATCCTAAA              CCCCTC TAAT GAGGGG               TTTTTTTTTGCCTAT 100 39
THICY_RS03110 NONE
THICY_RS03115 NONE
        ectC  755762 ..  755777 +  -7.5  -5.31456   TCATGAGAAGTAAAA              GCCCC GAGTTA GGGGC               TTTTTTGTCAATTAA 100 47
THICY_RS03130 NONE
THICY_RS03135  759446 ..  759461 +  -5.4  -3.05596   GGCAAAAGATGCTAA              CGATGG CATC CCATTG               TTCAGTACCAAAATC  51 350
THICY_RS03150 NONE
THICY_RS03155 NONE
THICY_RS03160 NONE
THICY_RS03165 NONE
THICY_RS03170 NONE
THICY_RS03175 NONE
THICY_RS03180 NONE
THICY_RS03185 NONE
THICY_RS03190 NONE
THICY_RS03195 NONE
THICY_RS03200 NONE
THICY_RS03205 NONE
THICY_RS03210 NONE
THICY_RS03215  775084 ..  775106 +  -6.2    -3.695   CCGACAAGAATGACC           GGATTGAGGT GAT GCCCCAGTCC           TTTAAGATATTTAAG  61 277
THICY_RS03225  775888 ..  775899 +  -4.4  -2.92246   GTTTTTGCGGGGTGT                GCAT GCTC ATGC                 TATGATTAAAATTGA  49 64
        hflB  777964 ..  777979 + -10.4  -5.84381   AATGCGTTAAAATCA              CCCTCC TTGT GGAGGG               TTTTTTTATTGGTGA 100 59
        folP NONE
        glmM NONE
THICY_RS03245 NONE
THICY_RS03250 NONE
THICY_RS03255  781405 ..  781416 +  -2.2  -2.77166   TGCCGGTTCGAGTCC                G-GCC ATC GGCAC                CATTTTTTAGGCTAA  41 12
THICY_RS03260 NONE
THICY_RS03265 NONE
THICY_RS03270 NONE
THICY_RS03275 NONE
THICY_RS03280 NONE
THICY_RS03285 NONE
THICY_RS03290 NONE
THICY_RS03295 NONE
THICY_RS03300 NONE
THICY_RS03305 NONE
THICY_RS03310 NONE
THICY_RS03315 NONE
THICY_RS03320 NONE
THICY_RS03325  795770 ..  795786 + -10.8   -4.7373   ACTCTGAAAGTGAAG              GGCGCC TAAAT GGCGCC              TTTTTAATAAAATAA  91 47
THICY_RS03330 NONE
THICY_RS03335  796333 ..  796358 + -16.3   -5.4833   ACCAAATCATAGAAA         GCCGGTATTTC AAAA GAAATACCGGC          TTTTTTATTACCTAA 100 37
THICY_RS03340  797880 ..  797926 +    -5  -3.33483   GTACACCACCGTCAC CATGCGCATGGCCATGGTCGAG TTC TTCGGCTGTTGCGCTGCGAATG TTCATGATTTCGATA  54 81
THICY_RS03350 NONE
THICY_RS03355  800516 ..  800550 +  -9.2   -3.3907   TGACGCTTATTTAGC     GCACAAGGGATGGGTG TAA TAACCAGCCCTGGTGC     TTGCTTAGGATTTGC  77 7
THICY_RS03365  802183 ..  802203 +  -9.7  -2.90714   CCACGCTTTTAAAGG            CACCGGATT TTG AATCCGGCG            TGTCTACCAATTTCA  68 237
THICY_RS03380  803904 ..  803942 + -15.5  -5.94713   GGGACGAATTTTATT  CAGCCCCGTGATTCTTTT GCGC AAAAGACTC-CGGGGCTG   TTTTTTTTGTAGGCT 100 67
THICY_RS03385 NONE
THICY_RS03390 NONE
THICY_RS03395  808383 ..  808400 +  -2.6  -2.94232   TGACAATCCCCCTGA             GCGCCT TATAAT ACGCGC              ATTGTTTAACGCGAC  43 81
THICY_RS03400  808501 ..  808520 +  -2.8  -2.80398   TCGAACCCCTCAGCA            CC-CACCAA ATT TTGGAGCGG            TAGTTCAGTTGGTTA  42 19
THICY_RS03405  808599 ..  808613 +   -10   -5.5112   TCCGCCATATTTAAA               GCTAGC ATT GCTAGC               TTTTTTATTGATACG 100 34
THICY_RS03410  808758 ..  808777 +  -2.8  -2.80398   TCGAACCCCTCAGCA            CC-CACCAA ATT TTGGAGCGG            TAGTTCAGTTGGTTA  42 19
THICY_RS03415  808858 ..  808883 + -19.1  -5.76633   CGCCATATTTTGAAA         CGCGCTGGTTC AATG GAACCAGCGCG          TTTTTTTATGTCTGA 100 36
THICY_RS03430  814298 ..  814320 +  -9.8  -5.27923   TAATCTAACAAAAAA           CCCCGGCTCA GAT TAAGTCGGGG           TTTTTTGTGGCCTTG 100 41
THICY_RS03440  815436 ..  815448 +  -4.8  -3.06133   TTGAGGTCATTCAGG                CGCA AATGA TGCG                TTAGGTCAAGCCTTC  52 9
THICY_RS03465 NONE
THICY_RS03470 NONE
        glnG  822605 ..  822618 +  -3.8  -3.26531   TTGTTTCATCTTAGA               TGCC TCCTAT GGCA                TGTTCATCTTGGTCA  49 438
THICY_RS03490 NONE
THICY_RS03495 NONE
THICY_RS03500 NONE
THICY_RS03505  827454 ..  827464 +  -3.2  -4.10429   TCAAATAACCCTTTT                 GCTT GAC AGGC                 TTTTAGCAAGTCATT  58 473
THICY_RS03525  830743 ..  830760 +  -5.5  -2.83522   GGCTTACGCGATACC             TGGAGCG AAAA CGCTTCG              ATTTAATCACAAACT  52 2
THICY_RS03530  832338 ..  832354 +  -9.4  -6.15828   TTGATAATTTTTTAG              CCAGGC CCAGT GCCTGG              TTTTTTTTTGCTAAA 100 196
THICY_RS03550 NONE
THICY_RS03555 NONE
THICY_RS03560  839698 ..  839720 + -10.6  -3.79113   TCACGACGAGCTAAA           CGGTTGGTGA TAA TCACTAGCCG           TTGTTGTGCGGCAAT  82 226
THICY_RS03570 NONE
THICY_RS03575  842303 ..  842330 +    -7  -2.52464   AGTCAACACCTAACT        GAGCAAGTTCAG CGAG TTGAGCTAGCTC         TACATTACCAGACAC  56 120
THICY_RS03585  843805 ..  843828 +  -3.8  -3.61894   ATAAATACACTCAAT          TGGCGCAGTT TTGT GGCTGTGCTA           TTATTACACCCACTT  53 97
THICY_RS03590 NONE
THICY_RS03600  845890 ..  845920 +  -3.3  -3.33696   AGTCCTCTGTTTATT       TCACGCACC ACATTTAACCCAA GGTGCGTGG       TTGCTTAACCCAAGA  48 185
        aceE NONE
THICY_RS03610 NONE
THICY_RS03615  851789 ..  851804 + -10.4  -5.80951   GACTTTGGTCTATAA              CCCCGT TACG ACGGGG               TTTTTTGTTTTAACT 100 45
THICY_RS03620 NONE
THICY_RS03625  853168 ..  853179 +  -7.2  -3.60006   AAGATTCACCCGCAC                GCGG ATCA CCGC                 TTTGAGCGTGTAGTT  64 224
THICY_RS03635  855189 ..  855215 + -10.9  -4.44667   ATTGCATTACAGCAA         GCCTTCCCC TGAGATTGC GGGGAAGGC         TTTGTTATTAAAAGC  90 50
THICY_RS03645 NONE
THICY_RS03650  858382 ..  858395 +  -2.4  -5.02476   GATTTATTAGCATTT               CTTG CATCCT CAAG                TTTTTTACAAAGTGT  69 116
        pyrG NONE
THICY_RS03660  860912 ..  860925 +  -2.5  -4.24342   ATCGTGTTTATTGTG               TAAAA GTTT TTTTA                TTTGTTACTCAAAAG  58 48
         eno  862242 ..  862298 +  -3.9  -4.04773   CTTAAGTGAGGTTGT CATCCAATGAAGCGTGCTTGGCTAAA TTTTGC TTTAGTTGCG-GCGCTTTTTTGGATG TTATTTAGCTTATTG  59 32
THICY_RS03670  862733 ..  862747 +  -8.6  -2.50493   TGGATAGCTACTTAG               TGTGTC GAT GACACA               GGTTTTAATAATCGG  60 142
THICY_RS03680 NONE
THICY_RS03685 NONE
THICY_RS03690  865579 ..  865597 + -10.4  -3.24329   ATGTTGGCTTATTAC             GCAACTTT GAC AAAGTTGC             TGTTGATTGACACTC  73 321
THICY_RS03700 NONE
THICY_RS03705  868314 ..  868325 +  -2.2  -4.90266   AAAAATCAATAAAAT                TCGC ATGA GTGA                 TTTTTAATTAATGAC  66 7
THICY_RS03710 NONE
THICY_RS03715  871054 ..  871079 +  -8.4  -3.07029   GCATTTCGCCCTGCG         CCTGAGTTTG TAGTTT TAAACTCAGG          TGTTGAGCATCTTTG  63 232
THICY_RS03740 NONE
THICY_RS03745  878641 ..  878671 + -17.8  -5.60993   TGCTAGTTAGGATTA       CCCCAATAGTTGGA TAT TCCAATTATTGGGG       TTTTTTTATGGCCGA 100 61
THICY_RS03760 NONE
THICY_RS03765 NONE
        ligA NONE
THICY_RS03775  887695 ..  887708 +  -3.8  -4.77157   ATGGGGAAAAGCCCG               CGAC GTCCGG GTCG                TTTTTAATCAATTGA  68 116
THICY_RS03805 NONE
THICY_RS03810 NONE
THICY_RS03815 NONE
THICY_RS03820 NONE
THICY_RS03825 NONE
THICY_RS03830 NONE
THICY_RS03835 NONE
THICY_RS03840 NONE
THICY_RS03845 NONE
THICY_RS03850 NONE
THICY_RS03855 NONE
THICY_RS03860 NONE
THICY_RS03865 NONE
THICY_RS03870 NONE
THICY_RS03875 NONE
THICY_RS03880 NONE
THICY_RS03885  902447 ..  902468 +  -9.5     -6.13   CGCCACTATCTAAAA           CCAGTTGTG TAAT CATAACTGG            TTTTTTTTTGGCTAT 100 36
THICY_RS03890 NONE
THICY_RS03895 NONE
THICY_RS03900  906619 ..  906632 +  -3.9  -3.72576   TTACGGTTTGGGCGC               CATAA ATCT TTATG                TTTAATGCCGGGGAA  55 434
        uvrC  912153 ..  912163 +    -4  -3.28712   AAATTTATGACTTTT                 TTCA TGG TGAA                 TTATGACCGACACAA  49 9
THICY_RS03930 NONE
THICY_RS03935  913682 ..  913703 +  -4.5  -3.32957   GCAATCTTAAGTGCG           TTTAGC-CCG CGA TGGTGCTAAA           ATTTTGCTTATTACA  52 52
THICY_RS03940 NONE
THICY_RS03945 NONE
THICY_RS03950 NONE
THICY_RS03955 NONE
THICY_RS03960 NONE
THICY_RS03965 NONE
THICY_RS03970 NONE
THICY_RS03975 NONE
THICY_RS03980 NONE
THICY_RS03985 NONE
THICY_RS03990 NONE
THICY_RS03995  918903 ..  918916 +  -5.2  -5.55769   GCCTGAACACCTAAG               CCCC TTAATT GGGG                TTTTTTGTTATCCGC  85 65
THICY_RS04000 NONE
THICY_RS04005 NONE
THICY_RS04010  921734 ..  921755 +  -4.4   -3.1505   AATCCCGCCTTATAA           CCCTGCTT TTTGAT AAGTGGGG            TTAATCAAAAATAAT  50 39
THICY_RS04015  922468 ..  922486 +  -2.4  -2.70232   TAAAAAATGTTGTGG             GCTGTAAA GTT TTAATAGC             TCCTATGGTCTTGGC  40 19
THICY_RS04020  924043 ..  924080 + -19.3  -6.11644   ATTTCTGGACAAAGG   CGTCCATTCTTCTCAGC TCTA GCTGGGAGGAATGGGCG    TTTTTTTTTGCCTCA 100 267
THICY_RS04025 NONE
THICY_RS04030 NONE
THICY_RS04035  927539 ..  927579 + -24.3  -6.20267   TTAATTTTGGACAAA  GGCGTCCATTAATTTCGCA CTA TGCGGGATTAATGGACGCC  TTTTTTTGTTTTTGA 100 212
THICY_RS04040 NONE
THICY_RS04045 NONE
THICY_RS04050 NONE
THICY_RS04055 NONE
THICY_RS04060 NONE
THICY_RS04065 NONE
THICY_RS04070 NONE
THICY_RS08595  939074 ..  939087 +  -6.7  -3.57561   TCGGCCGTTTGTTCA               GCCAA TTTT TTGGC                TTTACCGGATTGAGA  61 382
THICY_RS04095  942046 ..  942056 +  -4.6  -3.10245   ATGGCGGAACAGGAG                 GCGC GGC GTGC                 TGTATCTTGAAGTAC  50 5
THICY_RS04100 NONE
THICY_RS04105  943932 ..  943957 +    -7  -3.76413   GATCATCTAAAAAAA         GCGGTAGATAG ACATC CTAT-TACCGC         TTTACGCTTTTCAAC  70 83
THICY_RS04115 NONE
THICY_RS04120 NONE
THICY_RS04125 NONE
THICY_RS04130  949396 ..  949435 +    -6  -2.54325   GCTGTGATCCGTTAA  TATATTTGTGGCTATTTTA TTG TAAAATAGCCACAT-TAAA  CTCTATTTACAAGGA  53 34
THICY_RS04135  949856 ..  949872 +  -3.7  -3.68962   CAATAGCTTAATAAG              GTCAC CCACATA GTGAC              TTGTGTATCTTGAAG  53 200
THICY_RS04240 NONE
THICY_RS04245 NONE
THICY_RS04250  971238 ..  971262 +  -3.5  -3.60627   ACCAACATATCGACA          GCTGACAAGAT AAC ATCTCGATAGC          TTTCAACTGAAATGA  50 92
THICY_RS04280  977773 ..  977801 +    -4  -3.63283   GCTTGATAAAATGCG       GAC-TGAATAACT TAAT AGTCATTCAAGTC        TTCTAATTTCAATTT  53 16
THICY_RS04320 NONE
THICY_RS04325  991208 ..  991233 +    -4  -4.10437   TGATAGGCTGGATTC         TCAGGATAGA GCCAAA TCTGTCCTGC          TTGTTTAATTAATCG  60 152
THICY_RS04345  995884 ..  995898 +  -3.6  -4.11216   ATCGCGATTTTTTAT               TCTTAA TGT TTAGGA               TTTTACAAATGAAAA  59 42
THICY_RS04350  996495 ..  996526 + -16.6  -4.25283   CAGAAAACTATAAAA      GACGCCCCGTGTTG ATAG CAATCCGGGGCGTC       TTTTAGTAACAACAT 100 53
THICY_RS04380 NONE
THICY_RS04385 1003592 .. 1003607 +  -5.4  -4.64861   GCAGTTCGTCAATGC              GCTGAT TTTG ATCGGC               TTTGTTTTGCGAGCC  73 486
THICY_RS04415 1010900 .. 1010917 +  -9.1   -4.7497   AGCAACTCTAAAAAA             TTCCCGC AATA GCGGGGA              TTTTTCATCGCTACA  88 48
THICY_RS04500 NONE
THICY_RS04505 NONE
THICY_RS04510 1035843 .. 1035857 +  -2.8  -3.31322   TGCTTATTTTACTAC               TTCGTT AAG GACGGA               TTATGCCCCATTCAG  46 18
THICY_RS04515 NONE
THICY_RS04520 NONE
THICY_RS04525 NONE
THICY_RS04530 1039071 .. 1039088 +  -8.4  -3.20435   TTGTCCAATCACAAA             CGCCAC CGCATA GTGGCG              TTCGTCACTGATTGA  68 85
THICY_RS04580 1049004 .. 1049020 +  -7.9  -2.71712   CCCAAAAACAAAAAC              GCCGGAT TCA ACCCGGC              ATTTCAAAACACACA  62 131
THICY_RS04815 1089767 .. 1089790 +  -7.4   -2.9652   CCGAAACCACCGCTG          TGGCGTGTTT TAGT AACCGCGCCA           TGTCATTGAGTTTTA  59 251
THICY_RS04845 NONE
THICY_RS04850 NONE
THICY_RS04855 1097527 .. 1097538 +  -2.2  -4.70879   ACGGGTGCGGGCTTT                G-CGC TCG GCGTC                TTTTTCCGCTTTGAG  67 486
        rpmJ 1102987 .. 1103003 +  -6.5  -5.64274   CGCGTAAACAAGAAA              CCGCC CTGATCA GGCGG              TTTTTTTATGCCTGG  90 74
THICY_RS04965 NONE
THICY_RS04970 1120045 .. 1120064 +  -6.4  -4.17878   AAAGGTATAAAAAAA            GCCAGATA ATGT TATCCGGC             TTTCATTTAATTTGG  71 68
THICY_RS05035 1131992 .. 1132003 +  -5.8  -3.61398   ATAACCAAGCCTCAT                CCAG CAGC CTGG                 TTGTTCCAACCAGGC  62 54
THICY_RS05145 NONE
THICY_RS05150 NONE
THICY_RS05155 1160866 .. 1160879 +  -4.5  -3.53189   GACACCATCGATACT               GGGTT GAGG AGCCC                TTCTGCTATTCACTT  53 46
THICY_RS05160 1162061 .. 1162090 +  -6.6  -4.17132   CGAACCCCATCCCTA      CCCG-CTAGT-TTC GGTT GAAGACTAGCCGGG       TTTGTTAGCAGGTTT  71 1
THICY_RS05250 NONE
THICY_RS05255 NONE
THICY_RS05260 NONE
THICY_RS08620 1180998 .. 1181016 +  -4.4  -3.41292   ATCAATCCAATCGCT             CGGACGAA ATT TACGCCCG             TCTTCTGTTACCCCT  50 290
THICY_RS05275 1182405 .. 1182416 +  -5.8  -3.63068   TATTGACTAGCAAAA                TGGC TAAA GCCA                 TTTCCGCTAGTCTCA  62 85
THICY_RS05320 NONE
THICY_RS05325 NONE
THICY_RS05330 1192408 .. 1192421 +  -9.5  -5.67063   AAAGCCCATTAAAAA               GCCCC TTCC GGGGC                TTTTTTTCTACTCAA 100 65
        aspA 1194747 .. 1194763 +    -5   -3.5393   TAAACGTTTAACAGA              GGGCGG TACAC CCGGCC              TTTAAACCAAGTAAT  56 4
THICY_RS05345 1195390 .. 1195400 +  -3.2  -3.73224   CTTCGGGATCAAAGA                 CGTT TAT GACG                 TTTGCTAGCCCCTGC  53 254
THICY_RS05400 NONE
THICY_RS05405 1210395 .. 1210408 +  -2.4  -3.68936   AACACACGATAAACA               GTTG CTAAGC CAAC                TTCTTCACCTTGCTC  50 309
THICY_RS05415 1211354 .. 1211366 +  -4.1  -3.41527   GGCAACCTCAACACG                TATGG TGG CCGTA                TTCTGCTCCAAATTA  50 292
        smpB 1212716 .. 1212728 +  -6.9  -3.57561   GGTAATCGCTGTAAA                CCGCC CGA GGTGG                TTTCACCGCTTAGAC  61 408
THICY_RS05440 NONE
THICY_RS05445 1216207 .. 1216218 +  -7.2  -2.89509   TGAGCTTAAAAACAA                CCGG TAAC CCGG                 GTTATCTTGTTCCGA  61 87
THICY_RS05455 NONE
THICY_RS05460 NONE
THICY_RS05465 1221266 .. 1221292 +  -7.9  -3.57144   TGCACCACTTCAAAA         GCAGGCTCTTC ATAAG GATGCGCCTGC         TTTAAGGCTGCCAAA  66 135
THICY_RS05475 1222001 .. 1222011 +    -4  -2.57683   AGAATAGTAGGGTTA                 TCAT TTC ATGA                 CTTATAAAGGAGTAT  45 119
THICY_RS05480 1222548 .. 1222572 +  -9.2  -5.77677   GTTGTTGTTGACGCA          GTGCAGCGGC TTCTT GCCGCTGTTC          TTTTTTATTCTTTTG 100 328
THICY_RS05505 NONE
THICY_RS05510 1231162 .. 1231190 + -11.1  -2.95918   AGTCAGCCTGAGTAG        CAGGTCTGCTA ATTGCTA TAGCAGGCCTG        GTTATTTAAGCCTTA  79 26
THICY_RS05585 1246491 .. 1246506 +  -6.2  -4.56607   CGCGCTTTACAAACC              TTGAAG AAAC CTTCAA               TTTTCTCGTTAATGC  75 322
THICY_RS05595 1249571 .. 1249584 +  -3.8  -2.71263   TACCACAGTGGCGGA               CTGC AAGGTC GCAG                TGATTAACAGGCGTT  45 5
THICY_RS05600 1250392 .. 1250407 +  -4.6   -5.4833   GTCTCCAATAAAAAA              CCCAGC TTAC GCTGAG               TTTTTTATTAGGTAA  81 56
THICY_RS05625 NONE
        mnmA NONE
THICY_RS05635 NONE
        dapD NONE
THICY_RS05680 NONE
THICY_RS05685 NONE
THICY_RS05690 1273293 .. 1273308 +  -3.4  -4.09243   CACTTTACTAACCTG              TTTATT TAAC AATAAA               TTTTGCGAGGATATA  57 30
THICY_RS05695 1273834 .. 1273865 + -11.6  -2.77899   AAAGTTGATCACAAG      CAGGCCTGCTAATC GCTC GGTTAGCCGGCTTG       TGCTTGATGACAGCG  81 45
THICY_RS05705 1276386 .. 1276397 +  -5.8  -2.64422   TCAATATTTTATAAA                CCCA ATAC TGGG                 TGCTGTAGCCTGTCT  54 27
THICY_RS05745 1283999 .. 1284014 +  -4.7  -3.22475   GACATTGGTTGGATC              TGGGT AACCAA ACCCA               TCTTCTGGCGGTACG  50 247
THICY_RS05760 NONE
THICY_RS05765 1286825 .. 1286838 +  -2.3  -2.87035   AAGCCCAAACTCAAA               GCGGT GATG ACCGG                TAGATTTTTCACTTT  40 460
THICY_RS05850 1302189 .. 1302200 +  -2.2   -4.4009   ATTGTCGGATAGAGT                TGTG CCAC CGCA                 TTTTGTAGACTCAAA  61 501
THICY_RS05865 1306399 .. 1306410 +  -4.4   -3.1372   CTACCCGACCAACAT                TGTC AGCT GACA                 TGTTGGTCACCCCTC  50 54
THICY_RS05875 1307692 .. 1307709 +  -4.1  -3.82208   GGATCCAATGGAATC             GCTTTGA TAGT TCCAAGC              TTTAACTCTTTCATC  57 220
THICY_RS05905 1313491 .. 1313501 +  -6.8  -2.71483   CTTAACCAAGGTTCA                 CTCG TGA CGAG                 TCATTGGCAAACTCT  56 36
THICY_RS05910 NONE
THICY_RS05915 1319324 .. 1319335 +  -5.8  -3.07443   ATCTAAAGCTACATC                CCAG GGCT CTGG                 TTGAATAGGATCTAC  53 110
THICY_RS05925 1321121 .. 1321135 +  -5.7  -3.05819   AATAACTTCGGCAGG               CTTGC TCGAC GCAAG               TGTTGGCGGTATGTC  53 266
THICY_RS05965 NONE
THICY_RS05970 NONE
THICY_RS05975 1336831 .. 1336842 +  -2.2   -5.2189   GTACCACTTACTTTC                CAGT GGTT GCTG                 TTTTTTCATCCTTGG  72 50
THICY_RS06000 1344618 .. 1344647 +  -5.7  -5.44721   CCCGATATCCTATTA       TTGCGTGACCG ACTTATTA TGGGCACGCAA        TTTTTTTAGAATACT  83 49
THICY_RS06015 NONE
THICY_RS06020 1350128 .. 1350145 +  -4.1  -4.14739   TTTGGCACCGGCAGA             GCGATTG ATGG CAATCGG              TTTTAACATGGCTAA  62 385
THICY_RS06045 NONE
THICY_RS06050 NONE
THICY_RS06055 1357111 .. 1357130 + -10.7  -2.57192   TAAATCGGAAAACAC            GGCTCGC AACACA GCGAGCC             TAACTTGCATTACAT  76 133
THICY_RS06070 NONE
THICY_RS06075 1362284 .. 1362298 +  -9.2   -4.8622   CAACCCGTCTAAAAA               GCGCCT TCA GGGCGC               TTTTTCATTAACAAA  91 52
THICY_RS06080 NONE
THICY_RS06085 NONE
THICY_RS06090 1364690 .. 1364727 + -12.1  -2.95896   GCAAAAATAAAAAAA   CGCGGGTAGTTATTCAGG CAT CCTGA-TAACAACCCACG   CTTTGTCAATAATGG  87 505
THICY_RS06110 NONE
THICY_RS06115 NONE
THICY_RS06120 1368212 .. 1368226 +  -4.2  -3.44146   CTAAACCAGCTTAAT               GCCG CTGCCGC CGGC               TTGATTGTCGCAAAA  50 166
THICY_RS06165 NONE
THICY_RS06170 1380393 .. 1380408 +  -6.8  -3.29144   ACTAAAAGGCAAAAA              CGTCCG CGCC CGGATG               TTATAAACCCGCTCA  61 4
THICY_RS06185 1396070 .. 1396119 +  -4.3   -4.7373   ACTCATAGTAAAATA TCTCAAGAAGATCACCTATCG CCTAAAAT CTATTGGCGACCTTCTTGAGG TTTTTGATACAGTCG  71 33
THICY_RS06200 NONE
THICY_RS06205 NONE
THICY_RS06210 1401168 .. 1401186 +  -5.9  -3.51232   TTAAATTAATCTCAT             CACCGCC GCGTG GGCCGTG             TTCGTTTGACCACAA  59 434
THICY_RS06260 1409871 .. 1409888 +  -9.9  -6.06723   TGGCAATGCATAAAA             CCTGTCA TAAC TGACAGG              TTTTTTTTTGCAAAC 100 55
THICY_RS06265 1411864 .. 1411874 +  -3.2  -5.00616   CGGTCGCATTTAAAC                 CAGC CGC GTTG                 TTTTTTGGCACCACG  73 375
THICY_RS06285 1417702 .. 1417722 +  -2.6  -3.62491   GCAAAAAACTTGTTT            TTTTGGCC GAAAA GGTTAAAA            TTTACAGAATTTTTT  49 49
THICY_RS06290 1418763 .. 1418785 + -13.4  -4.20148   GATACCTGATGATAT           AACCACCCGC ACT GCGGGTGGTG           TTGTTTTAAGCTAAT 100 54
THICY_RS06295 1419378 .. 1419401 + -11.1  -2.92667   CACATCTAACCCTAA          TTAGCGAGC CATTTT GCTCGCTAA           TCATTTCACAGTTCG  79 56
THICY_RS06300 NONE
THICY_RS06305 1423038 .. 1423048 +  -5.4  -3.08934   CAGAACCTGGTACAG                 TTGC GGT GCAA                 TCTTGCGCTGTCTAG  51 296
THICY_RS06330 1426993 .. 1427008 + -11.8  -5.06816   TTCGGTCATAAAAAA              CCCGGC TGAT GCCGGG               TTTTTGTTAAAGACT 100 69
THICY_RS06355 NONE
THICY_RS06360 NONE
THICY_RS08640 NONE
THICY_RS06370 NONE
THICY_RS06375 NONE
THICY_RS06380 NONE
THICY_RS06385 NONE
THICY_RS06390 NONE
THICY_RS06395 NONE
THICY_RS06400 NONE
THICY_RS06405 1441980 .. 1441995 +  -3.3  -2.81872   AAGCCTCGCGCTTTT              TTAGC ATAAAA GCTAA               TCATCTTATACTGAC  43 197
THICY_RS06430 NONE
THICY_RS06435 1448214 .. 1448224 +  -5.4  -3.61244   TTTACGTGATGATGC                 TGTC ATC GACA                 TTCGTTTGTGAGGTC  59 4
        pdxA NONE
THICY_RS06445 NONE
THICY_RS06450 1451023 .. 1451040 +  -2.6   -3.4285   GTACGCAGCTTACTG             CATCGC ATCTAC GCGTTG              TTGTACCTTGGCTAA  47 112
THICY_RS06465 NONE
THICY_RS06470 1452460 .. 1452474 +  -2.8  -5.63103   CCTGGCCCGGCCCGG               CCAG CACACAA CTGG               TTTTTTTAATTGGCG  80 2
THICY_RS06475 1454049 .. 1454067 +    -3  -3.79668   ATGATCAATAATACG             GCGACG AACTAAA CGACGC             TTTGATCGCTTGCCT  51 301
        glnA 1455891 .. 1455906 + -10.4  -5.61689   TGACCAATAAAAAAA              CCCAGC TCGT GCTGGG               TTTTTTATTAGTTTT 100 73
THICY_RS06530 1466951 .. 1466980 + -18.1  -4.07124   ATACTCAGTAAAATA       GTAATAAAGGGGC TAAC GCCCCTTTATTAC        TTTATATGCCTACTA 100 52
THICY_RS06565 NONE
THICY_RS06570 NONE
THICY_RS06575 NONE
THICY_RS06580 NONE
THICY_RS06585 NONE
THICY_RS06590 NONE
THICY_RS06595 1478397 .. 1478413 +  -9.5  -3.14414   GGGACAGGCGTCGAA              TCGCAAA GCT TTTGCGA              TGTTCCCTGTCCTTT  74 178
THICY_RS06600 NONE
THICY_RS06605 NONE
THICY_RS06610 1481526 .. 1481546 +  -9.7  -3.57263   ACCGCTTTGGGGCGG            CTAACCAGG CAT CCAGGTTAG            TTTCGCCCTGCCAAT  74 48
THICY_RS06630 NONE
THICY_RS06635 1485880 .. 1485890 +    -4  -4.10453   AAACCCTGATGTCGT                 CTAA TTC TTAG                 TTTTCAAACGATTTG  59 15
THICY_RS06700 NONE
THICY_RS06705 NONE
THICY_RS06710 1505996 .. 1506035 + -11.1  -3.30441   AAAGCTTATTTACAA  GTCAATAAATAATAAGT AAAATA ACGTATTATTTATTGAC   TTGTAACACATGATA  82 40
THICY_RS06715 1506879 .. 1506890 +  -2.2  -3.65812   CCAACTGGGAGTGAT                TGGC GGGC GCTA                 TTATGTTGAAAAAAA  48 5
THICY_RS06720 NONE
THICY_RS06725 1508999 .. 1509011 +  -3.4   -4.0896   CCGAGCGCCCCCACG                CAAG ACCTG CTTG                TTTTAGCGGCACTTT  58 502
THICY_RS06735 NONE
THICY_RS06740 1512419 .. 1512431 +  -9.1  -3.86897   CAATTAGCAAGCCCT                GCTCG CCA CGAGC                TTTGTCCAGCGTCCA  76 487
THICY_RS06755 NONE
THICY_RS06760 NONE
THICY_RS06765 1517291 .. 1517301 +  -6.8  -3.53012   ACACCACCTGCCAAT                 CACC AAA GGTG                 TTTGCCAAGGACCAG  61 452
THICY_RS06780 NONE
THICY_RS06785 1521736 .. 1521747 +  -7.2  -2.77899   AATGCTTGCCATAAT                GGCC ACCA GGCC                 TGCTTGCTGCCAGGA  57 235
THICY_RS06800 NONE
THICY_RS06805 1524602 .. 1524616 +  -7.2  -3.17219   CACCACCTGTGCCTC               GCTAAT ACT ATTAGC               TTGATAGGCGTTCTG  60 400
THICY_RS06870 NONE
THICY_RS06875 1540299 .. 1540314 +  -4.6   -2.8632   AAAAACGCCATCATT              GCCTGG TAAG CCAAGC               TCTGATAGTCTATTA  48 17
THICY_RS06880 1540964 .. 1540994 +  -4.7  -3.22668   ACTGTTTTTGATGAT       TAGCTTCGATTGT CAAAA ACAAACGAAGCCG       TATTATAACGAGTTT  54 160
THICY_RS06910 1547031 .. 1547051 +  -3.2  -3.59979   CATAACGCCTAAAAA            GGTTGCGA CACCC TTGCCACC            TTTAAACTGAAAAAA  50 273
THICY_RS06920 NONE
THICY_RS06925 1548980 .. 1548990 +  -4.6  -2.68434   ATGGGCTTTCAGCAG                 CGCG ATT TGCG                 TCATCTACTGTAACG  47 2
THICY_RS06930 1549932 .. 1549960 +  -3.7  -4.51787   ATGAAATTGCGTTTG        TGGTGTCCTTGCC GAT GGTGTGGGCGTCA        TTATTTTCTTCTCTA  64 132
THICY_RS06935 1551649 .. 1551661 +  -4.1  -3.89055   TATTTTTCATAAAAA                GGCTT GCA AAGTC                TTTCTAAGGCTCTAT  57 119
THICY_RS06940 1551797 .. 1551820 +  -7.5    -5.626   GAGCCAAATTTTAAA          CCCTAGTTA TTTATT TAACTGGGG           TTTTTTTATGACCTA 100 35
THICY_RS06945 NONE
THICY_RS06950 1553615 .. 1553647 +  -4.2  -3.80855   CAAGCTATCGCGTGT     GATGGGATCGCGCCAG ATG CTG-CGCAA-CTCATC     TTCATTTTTAAAGAA  57 470
THICY_RS07045 1568736 .. 1568762 + -10.2  -3.05046   TGACGATCAATTTGA         TAGGCATCGATT AAC AGTCGATGCCAA         ATTTTCAGCGGATGA  72 107
THICY_RS07065 NONE
THICY_RS07070 1575089 .. 1575105 +    -8  -2.53449   AATCCACCGCTTTGA              GCGCAT CTAAA ATGCGC              ATATTATCGGAATAT  57 208
THICY_RS07080 NONE
THICY_RS07085 1579708 .. 1579726 + -10.3  -5.82388   CTACTAAAACAAAAA             CCCCATC CTAGT GATGGGG             TTTTTTTTGGCGTTT 100 57
THICY_RS07095 NONE
THICY_RS07100 NONE
THICY_RS07105 1584540 .. 1584561 + -13.1  -5.12068   GTCGCTTACAAAAAA           GGCACGATA AATT TATCGTGCC            TTTTTATTAAATATA 100 61
THICY_RS07140 1594193 .. 1594208 +  -3.4  -3.14132   AGAATTAAACAATTC              TAATAA GTTT TTATTA               TTCGTCACCAAAAAA  46 57
THICY_RS07145 1594939 .. 1594967 +  -3.8   -5.4251   GCTTCTCCTCCCCTT        GCCGGCGC ACCCTTTTGTTAG GCGTCGGC        TTTTTTGTCTCTCAA  79 52
THICY_RS07150 1596521 .. 1596557 +  -6.7  -5.19328   AACTTAACCCAACCC  GCCCCGGCGTCGGCTTGT TCCC GCAAG-C-AC-CCGGGGC   TTTTTATTATCAAAT  88 73
THICY_RS07155 NONE
THICY_RS07160 NONE
THICY_RS07165 NONE
THICY_RS07170 1600837 .. 1600872 +  -2.4  -2.62043   TATCTAAAAACCGGA    GC-CTAGCATGAACGCG GTG CGCGTCCAGGCTCCTGC    TAAATTAATTCTCAG  40 20
THICY_RS07175 NONE
THICY_RS07180 NONE
THICY_RS07185 1603996 .. 1604010 +  -4.2  -5.42259   GTCGCGCTATTTAAT               CCGG CGCAAAC CCGG               TTTTTTTGCGCCTGA  81 42
THICY_RS07215 1608989 .. 1608999 +    -4  -4.93547   CGTGATCACCAGCGT                 CTTT ACG AAAG                 TTTTTGATTGATTAA  71 105
THICY_RS07220 1609625 .. 1609640 + -10.4  -3.27786   ACTTTTTTGATAGTA              GCGTCG ACCA CGACGC               TTGCTCGGTTTTAAC  75 334
THICY_RS07265 1617771 .. 1617787 + -12.3  -5.24129   AATAACCATCACCAG              GCCTGCT TAA AGCAGGC              TTTTTTATACCCAGA 100 57
THICY_RS07280 NONE
THICY_RS07285 1622494 .. 1622504 +  -5.4  -2.71364   TTCCAAATAGTCAAA                 TGCA CCT TGCA                 TGATTGCCCGACTAC  48 359
THICY_RS07300 1626363 .. 1626384 +  -2.3  -2.64747   AAACCCTTATAATGA           CG-GCACTTT CAT AAAGTACGCG           CTTATAGTGAAATGG  40 109
THICY_RS07305 1626541 .. 1626558 +  -4.1  -3.75402   TCTCAAGGTTAGCAG             TGCGTAA AGTA TTTCGCA              ATTTTTTCGTTCAAA  55 110
THICY_RS07310 NONE
THICY_RS07315 1628669 .. 1628681 +  -6.3  -2.63902   TAAACCCGTAAAAGC                GCATA GTT TATGC                TAGGTTACTTCTTAT  54 38
        hemH 1634271 .. 1634286 + -11.8  -5.13521   CGCAAACCCAACTAA              GGCGCC ACCA GGCGCC               TTTTTTAACTGGTTT 100 49
THICY_RS07355 NONE
THICY_RS07360 1671695 .. 1671705 +  -5.4  -2.56715   ATTTACAATAAACCC                 CCAT TCC ATGG                 TGAATTAGTGACGGT  51 30
THICY_RS07370 NONE
THICY_RS07375 1676546 .. 1676557 +  -5.8  -3.37796   ATTTACTCTAACCCT                GCCT CAGG AGGC                 TTATGCATCATGAAC  58 1
THICY_RS07380 1677268 .. 1677283 +  -3.2  -2.77899   AGACAGCGAACTAGA              ATCAGC TGCG GCTGAC               TAATTACTCAGCGGA  44 7
THICY_RS07400 1682615 .. 1682642 + -12.6  -5.24129   AGGCCAAATAAAAAA        GCCCCCGTCTCC ATTT GGATTCGGGGGC         TTTTTTCTAGGCGGG 100 83
THICY_RS07415 NONE
THICY_RS07420 NONE
THICY_RS07425 1689808 .. 1689818 +  -2.6  -4.19258   TAATTTAGCCTTGAC                 TAAA TAT TTTA                 TTTTAAATAGCATAT  55 41
THICY_RS07430 1692009 .. 1692025 + -13.7  -5.65927   TAAGCGCTTCAACTT              GGCCGCA TAA TGCGGCC              TTTTTTATTTGCATC 100 38
THICY_RS07435 NONE
THICY_RS07440 NONE
THICY_RS07445 NONE
THICY_RS07450 NONE
THICY_RS07455 NONE
THICY_RS07460 1697948 .. 1697990 +    -3  -3.53452   TTCTAAGCTCCATTT TCTATTGACGCTAAAAC ATCACCCCCG GTTTTAGCGTC-ATAAA TATTTGCTATAGTTT  47 41
THICY_RS07465 NONE
THICY_RS07470 1699778 .. 1699802 +  -3.5  -4.15565   GCACCACCAAATCGC         CGGCG-GGCT TACCAT AGCCACGCCC          TTTTAACCTCATGCG  60 152
THICY_RS07480 NONE
THICY_RS07485 1703767 .. 1703779 +  -4.8  -3.27436   AAGTTGTCCAGATCG                GCCT CTAAC AGGC                TCTTGTAAATATCTG  52 428
THICY_RS07535 1731067 .. 1731082 +  -4.7  -3.35813   CCTGAGCAAAAATTC              GCATC CATCAA GATGC               TTAGTTAGAATGAAC  54 99
THICY_RS07540 1732960 .. 1732971 +  -2.2  -3.51563   TGGCTACTATTTACA                CCTT TTAG GAGG                 TTATATGCCAATTTT  46 18
THICY_RS07545 NONE
THICY_RS07550 NONE
THICY_RS07555 NONE
THICY_RS07560 1735038 .. 1735057 + -12.2  -2.79766   TAAAGCTGGATCTAC            GACCACCA GGCC TGGTGGTC             ATGTTGTTTGCTTTT  86 38
THICY_RS07575 1737775 .. 1737791 +  -4.3  -4.05067   ACGGTTAAGCAGTAG              CAGGCCT GGT GGGCATG              TGTTTTTATACCCTA  61 26
THICY_RS07595 1741919 .. 1741952 +  -3.9  -3.88291   GCCGTGCGCCCTCTT     GTCG-AACTATCCGGA ATT TCAGGATAGTTGCCGC     TTTATCCAGCTCCTG  57 61
THICY_RS07620 1748668 .. 1748700 +    -7  -2.60075   TAACTGGGCATCGAC      TTGGTGGCGTAACT CTTCC AGTTGCGCCAGCAC      CTTGCTTACAGACCG  56 373
THICY_RS07715 NONE
         fmt NONE
THICY_RS07725 NONE
THICY_RS07730 NONE
THICY_RS07735 NONE
THICY_RS07740 1772930 .. 1772942 +  -3.4  -2.91395   AAGAGCCTCGACATC                GATC CAAAA GATC                CTTTGTAGGAAACCT  45 5
        trkA NONE
THICY_RS07750 1775817 .. 1775829 +  -4.1  -5.08824   CTTCTGGCGCGCTTA                GGACT GAG AGTTC                TTTTTTGGGTCACCC  73 25
THICY_RS07795 NONE
        hisH 1785913 .. 1785928 +  -2.6   -2.5369   CTGGCAACCGAAATC              GGCA-TA AAA TAGTGCC              AGTTTTATAACCATT  41 19
THICY_RS07805 NONE
THICY_RS07810 NONE
THICY_RS07815 NONE
THICY_RS07820 NONE
THICY_RS07825 1788496 .. 1788510 +    -5  -2.53271   ACAAAGGACTAAATG               CCATGT TTG ATATGG               GTATTCTGGAAATAG  49 71
THICY_RS07830 NONE
THICY_RS07835 NONE
THICY_RS07840 NONE
THICY_RS07845 1792388 .. 1792398 +    -4  -3.78953   ACCGTGCTATTTTAA                 TAGT ATT ACTA                 TTTACTAATGGAGGT  55 57
THICY_RS07850 1793304 .. 1793319 +    -9  -5.64274   CATCTAAACACAAAA              CCAGCA GTAA TGCTGG               TTTTTTTATGAGTCG 100 51
THICY_RS07960 1809525 .. 1809547 + -10.6  -5.61596   TTAATGCAATCGAAA           CCGTGAAGTT TTC AACTCCACGG           TTTTTTTATACCCAT 100 64
THICY_RS07965 1810198 .. 1810210 +  -3.4  -3.83437   TCGGATGGCGGCCAC                CCAA AAACC TTGG                TGTTTTAATTGCTCA  55 135
THICY_RS07980 1813012 .. 1813024 +  -4.1  -2.78463   CGTTAAATCATCAAG                TTAGC TAT GCTAG                TATGATAAAAAAGAT  45 35
THICY_RS07985 1814546 .. 1814562 +  -4.4  -4.07568   TCCGGATGAAAGGCG              CGATGT TTTTT ACGTCG              TTTTAAAACCGCGAC  60 380
THICY_RS08010 1820953 .. 1820967 +  -8.5  -5.95539   ATACACACGTTATTT               GGGCC CCAAA GGCCC               TTTTTTTATTTAGCC 100 40
         rho 1822302 .. 1822313 +  -4.4  -2.74322   TTTACATCCATGAAA                CGTT AAAA AACG                 CTTTGAAGGCTTGAA  48 20
       rpmE2 1822671 .. 1822697 +  -8.7  -6.09196   TTTATCTTAAAAAAA        CCGGCCGTGCTA TTTT TAGC-CTGCCGG         TTTTTTTATTTTCAC 100 48
        hemE 1824265 .. 1824277 +  -5.5   -2.6518   CTTCATTAAATTCTT                TACGC TTC GCGTG                CTTGTAGCTGTTCAA  51 388
THICY_RS08040 1826216 .. 1826240 +    -5  -3.28783   CGAATCCCAGTCAGA          GCCTGATGCT CATCA AACATTAGGC          TATTAATTAAGTTTT  54 46
THICY_RS08045 1829317 .. 1829329 +  -3.3  -4.41633   ACTCGCTAAATAACT                CGCAA CCT TAGCG                TTATTTTTCAAAATA  63 258
THICY_RS08075 1835467 .. 1835481 +  -8.6  -2.63913   CCAAATCTTGACCTA               TGGCAA AGA TTGCCA               TAATCTAGAATCATC  67 30
THICY_RS08080 NONE
THICY_RS08085 1836224 .. 1836240 +  -3.7  -3.24022   ATTTAATCGGCGTGT              GTTTCAA TTT TTGTAAC              CTTTTCTCGCCGTTT  49 205
THICY_RS08090 NONE
THICY_RS08095 NONE
THICY_RS08100 1839726 .. 1839742 +  -2.2  -2.77455   CCGCATAGAGATCGT              CGCC CCAATGCAA GGCG              GTTAATTTCTAGTGG  41 4
THICY_RS08105 NONE
THICY_RS08110 NONE
THICY_RS08115 1841662 .. 1841681 +  -4.2  -3.21806   CGCCGTATTTTCTCA            TCACGCCG TGTA TGGCCTGA             TTAAATATTGATTCA  50 2
THICY_RS08120 1842258 .. 1842281 + -10.4  -5.26316   CAGGACATAAACCAA          CCCCAGTTGAT CGT ATCA-CTGGGG          TTTTTTATGAGCTAA 100 59
THICY_RS08125 1842784 .. 1842842 +  -3.7  -3.63895   AATTAAAATAACTAA GCCGACCCAGTGATTTTGCTTGAATGCT TTAA AGCAAGCCTGCGGA-TCACGGTGTCGGC TTTGCCATAATTGCG  53 69
THICY_RS08215 1858032 .. 1858042 +    -4  -3.18023   AGGCGGGCGCTTCAC                 GATT CAA AATC                 TGTTGCTGGTCATAA  48 334
THICY_RS08230 1862922 .. 1862934 +  -6.2  -3.28269   ATTGCCGCACCAAAC                GCGG CATCA CCGC                TTCACTTTGGAAGTT  58 69
THICY_RS08275 1871473 .. 1871483 +  -2.6  -2.87344   TCAAATGCGTCGCCC                 TTTA CCT TAAA                 TCTATAAACGAGATG  42 16
THICY_RS08280 1873253 .. 1873265 + -10.5  -3.18264   TCATGTCATATTTTT                GCCGC ACG GCGGC                TTGCTCACTCACACC  73 383
        greB 1882115 .. 1882136 +  -2.3  -3.39483   GTCTGAGTAGCATCA           TCGCCG-ATT GAA AATGCCGCGA           CTTTTTCAATGCGGT  45 468
THICY_RS08320 1884410 .. 1884425 +  -3.2  -4.37092   CTCCATCATCCAATA              CAGCGA TTGA TCCCTG               TTTTATCGCGGGCAT  62 16
THICY_RS08345 1888846 .. 1888856 +  -2.6   -3.9712   ACCTAGTCATCACAA                 TTTA TTC TAAA                 TTTGTGGTAGAATCA  53 35
        gyrB 1891373 .. 1891390 +  -4.2  -3.53343   AGACCATCTTGGTCG             CAATGA CTCTGT TCATTG              TTTAGAAGGAGGCTT  53 55
THICY_RS08355 1892378 .. 1892394 + -10.1  -5.60993   AGGCCATTACTAAAA              CCCGCTT TAT GAGCGGG              TTTTTTTATCCCACA 100 62
THICY_RS08360 NONE
THICY_RS08365 1895203 .. 1895218 +  -6.8  -3.86015   GACATTAAGATTGAT              TCGGTG CGTC CACCGG               TTTGTAAACCGAATA  66 500
THICY_RS08380 1897127 .. 1897167 +  -9.9  -2.78746   TCTTGTAAATGTTTA  TTAAGTTGTAACCAGGC CTGGTTA GCCTGATTGCGACTTAA  CTTGTCTGCTTTGGT  68 159
THICY_RS08390 NONE
THICY_RS08395 NONE
THICY_RS08400 1901573 .. 1901586 +  -2.4  -3.57792   TTGAGGCTTAAAGTC               CCTT CTAATT AAGG                TTTAAACATGAATGC  48 30
THICY_RS08405 1903312 .. 1903328 +  -2.9  -4.26903   ATAACCTATATAGAG              TGCCGCT ATT AGCTGTA              TTTTGCTAGGATCAA  59 100
THICY_RS08415 NONE
THICY_RS08420 NONE
THICY_RS08425 1907112 .. 1907123 +    -3  -3.07831   TTTTAGTTCCTTTTG                CATT GGAA AATG                 ATTTATAGTTATTGG  44 13
THICY_RS08430 NONE
THICY_RS08435 1909773 .. 1909783 +  -8.2  -2.52516   TAGTAGCATCAGCGC                 CGGC AAA GCCG                 CTTGATCATAAAGCC  60 137
THICY_RS08500 1923810 .. 1923820 +  -2.6  -2.73441   TTATTTGATTTAGTT                 TAAA ACT TTTA                 CTTTAAAACATACTA  42 23
THICY_RS08505 1924880 .. 1924892 +  -6.3  -3.63515   GACGCACAGAATCGG                CAAAC TTG GTTTG                TTGTTGACGATCGAG  63 522
THICY_RS08515 1926049 .. 1926074 + -12.7  -2.57963   TTTTGCTCTAGCACA         CCTTAGCACTC ATTT GAGTGTTAAGG          GTTAGTGCTTGTGGC  89 54
THICY_RS08520 1928209 .. 1928220 +  -2.2   -3.0579   CAATCTGCGTTTGAG                TGCT GAAT GGCA                 GTTTTAACCGCGTTT  43 7
THICY_RS08525 1930498 .. 1930525 + -10.5  -3.05816   GTTGTTTTAGGTTAA        CCAGCGCGCTC AGAAAC GGGCGCGCTGA         TTCGCTAAACGCTGG  78 47
THICY_RS08535 NONE
THICY_RS08530 1930501 .. 1930522 -  -9.3  -2.73364   GTTTTAGGTTAACCA           GCGCGCTCA GAAA CGGGCGCGC            TGATTCGCTAAACGC  72 10
THICY_RS08510 1924298 .. 1924313 -  -2.5    -4.386   TAAGTGGTGAGAAAA              TCACC GAACAG GGCGA               ATTAGTGGATTCGGC  61 92
THICY_RS08495 NONE
THICY_RS08490 NONE
THICY_RS08485 NONE
THICY_RS08480 NONE
THICY_RS08475 NONE
THICY_RS08470 NONE
THICY_RS08465 1916791 .. 1916805 -  -6.4  -2.68381   CAATTCACTAAACAT               GACCAA CCT CTGGTC               TAACCAGACGATAAC  56 3
THICY_RS08460 NONE
THICY_RS08455 1913216 .. 1913248 -  -4.9  -5.06414   TTTCGTTAATAAAAA      CTATATCCTAATTTG CTG CTAATTTGGATAAAG      TAATGCCAGCTCTTT  76 11
THICY_RS08450 1912398 .. 1912411 -  -9.5  -5.72207   TGTAAATTAAAAAAA               CGCCG ATGA CGGCG                TTTTTTTGGATGGGA 100 53
THICY_RS08445 NONE
THICY_RS08440 1909390 .. 1909416 -  -2.3  -4.18018   GGGTGGTACCTAAAA        CACT-ATCCTGT CCTA ACTGGATTAGCG         GTCAACATCAAAGTG  57 277
THICY_RS08410 1903139 .. 1903150 -  -4.4  -4.16921   GAACAAGCGTTAAAA                GACA ATAC TGTC                 AGTGTTATCGATTGC  62 109
THICY_RS08385 1896865 .. 1896878 -  -8.1  -3.36518   GCAAAATTGTCACAA               GGTGG TGCG CCACC                AGAGTTTTTAAGTAC  64 144
THICY_RS08375 NONE
THICY_RS08370 1894476 .. 1894489 -  -3.9  -3.94746   GTATATGGAATCAAA               TCAAA TGGT TTTGA                CCGTGGCTGATAATG  57 218
        rpmH NONE
THICY_RS08335 NONE
THICY_RS08330 1885277 .. 1885297 - -11.2  -5.27335   TCCTTTAAACAAAAA            GACCATGG GATTG CCATGGTC            CTTACAAAGCCTTTC 100 53
THICY_RS08325 1884150 .. 1884166 -  -5.1  -3.60818   GTAAAAGTTCGCAAA              CCCGGTA AAT TACCGAA              TGTACATGCATCCAT  56 325
THICY_RS08315 1881546 .. 1881560 - -12.8  -2.89191   TTACATTTCGATAGA               CGCGCC CAT GGCGCG               CGCATGCTTACAAAA  81 164
THICY_RS08305 NONE
THICY_RS08300 NONE
THICY_RS08295 NONE
THICY_RS08290 NONE
THICY_RS08285 1872889 .. 1872912 -  -5.4  -3.57309   CAAAACTCGTTTAAA          CTTCTAACTCG TCG CG-GTTAAAAG          GTCGGGGCGATCGCA  59 19
THICY_RS08270 1869906 .. 1869931 -  -2.5  -3.72241   TATTAAGCAGTGAAA         TCAACTGAAGC CCCT GCTTAGGCTGA          TTCGGGTTGATACAA  51 17
THICY_RS08265 NONE
THICY_RS08260 NONE
THICY_RS08255 1866892 .. 1866904 - -10.5  -6.15717   TAAATACAAAAAAAA                CCCGC ATA GCGGG                TTTCGTTAGAACGCG 100 57
THICY_RS08250 NONE
THICY_RS08245 1866240 .. 1866250 -    -4  -2.57132   TTGGCTGGCGATAAC                 CTAA GGT TTAG                 CTGGCTTAGTAGTGG  45 52
THICY_RS08240 1864045 .. 1864061 -  -9.4  -5.80817   GCCAACATAAAAAAA              CCGAGC ACTTG GCTCGG              TCAAAGATCTTTAGC 100 92
THICY_RS08235 1862557 .. 1862572 -  -6.8  -3.68738   GGCGGAACAAATGAA              CGCCAGC TGT GC-GGCG              GTAGCGAATGACATT  63 358
THICY_RS08670 NONE
THICY_RS08220 1857230 .. 1857244 -  -5.6  -3.37245   CTATCGCAACACTAA               CCGGCT GCC AGCTGG               TAGACACGCCGAAAA  54 478
        gidA NONE
THICY_RS08205 NONE
THICY_RS08200 NONE
THICY_RS08195 NONE
THICY_RS08190 NONE
THICY_RS08185 NONE
THICY_RS08180 1851061 .. 1851079 -  -3.2  -3.70902   TTTTTTACAGTTAAA             GTTAAAAA AGC TTTTTACC             AGTTGGTAGGTGCGC  53 87
THICY_RS08175 NONE
THICY_RS08170 NONE
THICY_RS08165 NONE
THICY_RS08160 NONE
THICY_RS08155 NONE
THICY_RS08150 NONE
THICY_RS08145 1845340 .. 1845353 -  -9.5  -5.71712   TCTGACATAAAAAAA               GCGCC CGAA GGCGC                TTCTTTTCGTTTTTG 100 51
        glmU NONE
THICY_RS08135 1843601 .. 1843620 -  -2.8  -3.72576   TTGGTTTGCATCAAA            GGCTTACT CAAA AATATGCC             CCCAACCCTGTTCGC  51 9
        ubiA 1842258 .. 1842281 - -10.4  -3.66365   CAGGACATAAACCAA          CCCCAGTTGAT CGT ATCA-CTGGGG          TTTTTTATGAGCTAA  81 489
THICY_RS08070 1832914 .. 1832929 -  -7.6  -4.77567   ACTTTGATAACAAAA              CAACCA GGCC TGGTTG               TGAAATGCTTTGGAA  84 66
THICY_RS08065 1831599 .. 1831610 -  -2.2  -3.22475   TTGATTTTCATAACA                CACA TTAA CGTG                 AAAAGAACAACAGTA  45 91
THICY_RS08060 NONE
THICY_RS08055 NONE
THICY_RS08050 1829001 .. 1829016 -  -2.5  -4.08919   AAACCTGAAATCAAA              CGCCT GATGGA AAGCG               CCATGCCGCTGAATG  55 164
THICY_RS08035 NONE
THICY_RS08030 NONE
        uvrD NONE
THICY_RS08000 NONE
THICY_RS07995 NONE
THICY_RS07990 1813976 .. 1813988 -  -3.3  -3.60805   ACACGCCATGGCAAA                CTCCC AAT GCGAG                TCGCGCAATTAGCTC  50 261
THICY_RS07975 1811266 .. 1811277 -  -3.6  -3.05647   GGCTAAGCAGACACA                GCCG CAGT CGAC                 ACAGCCATCTCCGCC  48 1
THICY_RS07970 1809882 .. 1809892 -  -3.2  -3.96216   GTGTTAGCGAAAGAA                 CCAC AGC GTGA                 AGTCGATCCTTTAAT  55 208
THICY_RS07955 NONE
THICY_RS07950 NONE
THICY_RS07945 NONE
        rbcL 1805369 .. 1805383 -  -4.3  -2.76261   GGGCAAGTCTGAAAT               TAAGC GTCAA GCTTA               TCAACAGTGTCAAAT  48 10
THICY_RS07935 NONE
THICY_RS07930 1802656 .. 1802703 -  -8.6   -2.7386   AATATGGAGAAATAG CTGGTAAAAGAGTCGATGACTTA GGC TTAG-CACCGATTCTATTACCAG AATCATTAACTGAGT  68 123
THICY_RS07925 NONE
THICY_RS07920 NONE
THICY_RS07915 1801499 .. 1801515 -  -5.9  -4.25056   GACTCTACCAATAAA              TCTTCTC AAC AAGAAGA              TTAATCCTTATCAAC  70 26
THICY_RS07910 NONE
THICY_RS07905 1800682 .. 1800698 -  -6.6  -2.53759   AATACTCCTAATTTA              GAGGTA ACCAG TACCTC              TAAATAAACACTTAA  56 41
THICY_RS07900 NONE
THICY_RS07895 1799843 .. 1799858 - -10.4  -6.24157   ACTCATAAAAAAAAA              GGCTGG ATAA CCAGCC               TTTCATAAAAAACAA 100 47
THICY_RS07890 NONE
THICY_RS07885 NONE
THICY_RS07880 NONE
THICY_RS07875 1795845 .. 1795858 -  -4.5  -4.84359   TTATTTCCATAAAAA               CGCCT AAAT AGACG                CGCTAGTTTAACAAA  71 50
THICY_RS07870 NONE
THICY_RS07865 NONE
THICY_RS07860 1793912 .. 1793926 -  -4.2   -3.5032   CGTTCATATTAAACA               CGCACA TCT TGTCCG               GTTAAACTCTGAATA  53 4
THICY_RS07855 1793304 .. 1793319 -    -9  -4.80455   CATCTAAACACAAAA              CCAGCA GTAA TGCTGG               TTTTTTTATGAGTCG  88 45
THICY_RS07790 1782817 .. 1782843 -  -8.1  -2.57013   CCTCAACTCAATTCA        TTACCGCCACCA AAAT TGGTGGCGA-AA         TTACACTATTAATTA  65 38
THICY_RS07785 NONE
THICY_RS07780 NONE
THICY_RS07775 1780643 .. 1780658 - -10.4   -5.1356   CGCCATTAACAAAAA              TGGGCC CGTA GGCCCA               TTTTTTACTTCTTAT  93 181
THICY_RS07770 NONE
THICY_RS07765 NONE
THICY_RS07760 1776023 .. 1776036 -  -2.5  -4.04206   GGATGGTGATATAAA               TAATT TCCA AATTA                CACCTCTTGCTTTAT  55 92
THICY_RS07755 1775486 .. 1775499 -  -5.3  -3.27476   AGGTGCAACGATTAA               TGCAT CCGA ATGCA                CTCATGCCCGTGAAA  54 340
THICY_RS07710 1764761 .. 1764771 -  -3.2  -3.40392   AAAAGATAAATTGAA                 CCGT AAA ACAG                 ACCGTTTAAGTTTAT  49 94
THICY_RS07705 NONE
THICY_RS07700 1763286 .. 1763296 -  -3.2  -2.69601   TGCACATTAAATGCA                 GGCA TTC TACC                 GAAAACTTGATCAAT  43 52
THICY_RS07695 NONE
        argS NONE
THICY_RS07685 1758232 .. 1758256 -  -4.3  -3.21704   GAATAAGAGAGTTAA          GGGTTATAAGT ATA ACTTAAAACAC          CATGAAACGATAGAA  50 57
THICY_RS07680 NONE
THICY_RS07675 NONE
THICY_RS07670 NONE
THICY_RS07665 1754708 .. 1754734 - -10.2  -4.60255   ACAACCTCCTAAAAA         TCCCAAGCCA GTTATTT TGGCCTGGGA         TTCTATTCACTATTT  89 63
THICY_RS07660 NONE
THICY_RS07655 1752312 .. 1752323 -  -5.8  -2.63549   GATTGGTAACAATAG                GGCT CATT AGCC                 GGCCTCTGGCAGTAA  54 20
THICY_RS07650 NONE
THICY_RS07645 NONE
THICY_RS07640 NONE
THICY_RS07635 NONE
THICY_RS07630 1748531 .. 1748543 -  -4.1  -3.00629   TAACAATTGATAAAG                CGTCA TAA TGACA                TGACCTCCAAAAGAT  47 15
THICY_RS07625 1748333 .. 1748344 -    -3  -3.42354   TAGGCGAACTTATAA                TAAG CGAA CTTA                 TAGCAAAAATAGCCC  47 23
THICY_RS07615 1747473 .. 1747483 -  -6.8  -3.35869   ACTAGAAATGAGTAA                 GCCA GTC TGGC                 GAAGGTGGATAAATT  61 50
THICY_RS07610 NONE
THICY_RS08665 NONE
THICY_RS08660 NONE
THICY_RS07600 1741403 .. 1741413 -  -3.2  -4.20516   TCTCGACCCAACAAA                 GCTC GAT AAGC                 TGAAAAAAATTCTCT  60 505
THICY_RS07590 NONE
THICY_RS07585 NONE
THICY_RS07580 1737835 .. 1737854 -  -2.9  -4.58395   CTCACCCTTTAAAAA            GTTGTAT TTTAAT ACACAAC             TAATCACAATCTTTA  62 25
THICY_RS07570 1736452 .. 1736468 -  -2.9  -3.70076   CTAAAGTCACTTAAA              CAGGC TACAAAT GCCCG              GTTTTCACCCATATT  49 13
THICY_RS07565 1734732 .. 1734751 - -10.8  -2.91378   GAAATAGCATCAAAC            CACAACCA GGCC TGGTTGTG             TCATCTATTAGGAGA  79 345
THICY_RS07530 NONE
THICY_RS07525 NONE
THICY_RS07520 NONE
THICY_RS07515 NONE
THICY_RS07510 1722994 .. 1723019 -  -9.1  -5.03314   CCCATGCTTAAAAAA         CTAGCTTACAG AAAA CTGCAAGCTAA          ACGAAGTGACTTACA  91 36
THICY_RS07505 NONE
THICY_RS07500 NONE
THICY_RS07495 1705062 .. 1705093 - -12.2  -5.45652   AGTCCGAAGAAAAAA      GCCCCAGCGCGTCA GTTT CAACGCGCGGAGGC       CTTAAAATACAGCCA 100 52
THICY_RS07490 1703322 .. 1703339 -  -3.3  -4.60924   GAAATTGGCTAAAAA             GCTGGCT AAAC AACCCGC              TAAAAAGAGCCCAAA  64 62
THICY_RS07475 1699235 .. 1699257 - -10.6  -5.03145   GAAGCCGCCAAAAAA           GGCGACCAAT TCG ATTGGTCGGC           ATTTAAAAGCCAACT 100 427
THICY_RS07410 NONE
THICY_RS07405 1682615 .. 1682642 - -12.6  -5.64421   AGGCCAAATAAAAAA        GCCCCCGTCTCC ATTT GGATTCGGGGGC         TTTTTTCTAGGCGGG 100 32
THICY_RS07395 NONE
THICY_RS07390 1678576 .. 1678593 -  -8.4  -4.94972   CATTATAACGAAAAA             GCCCCT ATCAAA AGGGGC              TTAACAAGGCTATCT  90 58
THICY_RS07385 1677269 .. 1677282 -  -6.7  -3.53366   GACAGCGAACTAGAA               TCAGC TGCG GCTGA                CTAATTACTCAGCGG  63 44
THICY_RS07365 1671692 .. 1671708 -  -2.9  -4.33417   GCTATTTACAATAAA              CCCCCAT TCC ATGGTGA              ATTAGTGACGGTTAT  58 44
THICY_RS07350 1668199 .. 1668213 -  -5.8  -3.01791   AGGCTCCTGCCAATA               CAATTA GCT TAATTG               AGTTAATTCCGGATT  56 416
THICY_RS07345 NONE
THICY_RS07340 1636581 .. 1636596 - -10.4  -4.62984   TTAGCACAGAGAAAA              GCCTGC ATGA GCAGGC               TTGATTAAGGGGTAA  89 50
THICY_RS07335 1634271 .. 1634286 - -11.8  -3.43217   CGCAAACCCAACTAA              GGCGCC ACCA GGCGCC               TTTTTTAACTGGTTT  85 30
THICY_RS07325 NONE
THICY_RS07320 1628483 .. 1628497 -   -10  -4.57569   GCACTGTGCGAAAAA               CTGGGT AAA ACCCAG               CTAAAACGTGTTGTT  91 214
THICY_RS07295 1622914 .. 1622928 -  -5.8  -5.40072   TGTTTCTTAAAAAAA               GATTTA TCT TAAATC               GCCAACACCCACCAT  85 14
THICY_RS07290 1622154 .. 1622168 -  -7.1  -3.41745   TGTGCATAAGATTAA               CGGCT GATCA AGCCG               GCTCTTGCGCTGAAT  66 18
THICY_RS07275 NONE
THICY_RS07270 1617834 .. 1617847 -  -5.3  -4.15703   TTTCATAAACAACAA               TGATG TAAC CATCA                ATATTTCTTATTGTA  65 139
THICY_RS07260 NONE
THICY_RS07255 1614281 .. 1614304 -  -8.2  -2.72371   TGCCTTAAACAATAT          GATTTGGCGT TTAC ACGCAAAATC           GGTCGGAACAACGAA  65 114
THICY_RS07250 NONE
        rplT 1613625 .. 1613638 -  -9.5  -5.28176   TCCATTGACAAAAAA               GGGGC TTAC GCCCC                TTTTCGGATCAACCA 100 50
THICY_RS07240 NONE
        pheT NONE
        ihfA NONE
THICY_RS07225 1608901 .. 1608911 -  -5.4  -4.46072   CGCAACAAACATAAA                 CTCT TAT AGAG                 AGCCTAGCTGTGAAA  69 511
THICY_RS07210 NONE
THICY_RS07205 1605571 .. 1605591 -  -2.5  -3.06399   GCCAATCAAAGTATA            GCGACTGAA CTT TTTAGCCAC            GACTTAATATTCTTT  44 29
THICY_RS07200 1605079 .. 1605093 -   -10  -4.13767   CTCCTCAGCGCAAAA               CACAGC GTG GCTGTG               ATTTAATAGACAAAT  85 173
THICY_RS07195 NONE
THICY_RS07190 1603926 .. 1603939 -  -5.2  -5.93809   GCGGCACAAAAAAAA               GCGG TCAGTG CCGC                TTTTCCAGGATTAAA 100 73
THICY_RS07135 1592302 .. 1592319 -  -2.8  -3.18776   GCAAATGCATTAATA             TATTAG TAAATT CTAATA              TTATAATTCAATAAT  44 41
THICY_RS07130 NONE
THICY_RS07125 NONE
THICY_RS07120 1586323 .. 1586350 -   -20  -5.39721   GCATTATACAAAAAA        CCCCGGTTAGCA TGCC TGCTAACCGGGG         TTAATCTGTTACCAC 100 64
THICY_RS07115 NONE
THICY_RS07110 1584540 .. 1584561 - -13.1  -5.24129   GTCGCTTACAAAAAA           GGCACGATA AATT TATCGTGCC            TTTTTATTAAATATA 100 58
THICY_RS07090 1579708 .. 1579726 - -10.3  -5.50723   CTACTAAAACAAAAA             CCCCATC CTAGT GATGGGG             TTTTTTTTGGCGTTT 100 50
THICY_RS07075 1574434 .. 1574448 -  -8.6  -2.94962   ACATGACCAACCATA               TTGAGC TTG GCTCAA               ATGCGCTTCAGGATG  63 484
        leuS NONE
THICY_RS07055 1569632 .. 1569662 -  -9.6  -4.15788   AAGTTGTTTAAGAAA       GGCCGACGCAATTA GCA TTAGCGCGCCGGCC       CTTGCGGTATTGACG  82 12
THICY_RS07050 1568378 .. 1568393 - -10.4  -3.77302   TCATTAGAAAATCAA              GCTCCG CTAA CGGAGC               AATTAACTACTCATG  83 283
THICY_RS07040 1567635 .. 1567649 -  -7.8  -5.58179   CACGACAAGAAAAAA               CCAGAC CAG GCCTGG               TTTTAATAGTAGGAG 100 44
THICY_RS07035 1566967 .. 1566977 -  -3.2  -2.57795   TTCATTACGAATCTA                 GCCA TTT TAGC                 GCTATTAATAAAGCA  43 124
THICY_RS07030 1565614 .. 1565624 -  -4.6  -3.53444   GCAGTGCCGCTGAAA                 CCCC GTT GGGA                 ATGCTCTATCTAGTA  53 79
THICY_RS07025 NONE
THICY_RS07020 NONE
THICY_RS07015 1563938 .. 1563954 -  -3.7  -3.05384   CTGGGTTTTATTTAA              GTTGTCA GAT TCACAAC              TCAGCCAGAAAAATA  47 108
THICY_RS07010 1563570 .. 1563601 - -13.2  -4.19123   TACAAATCACACAAA      CAAAAAAGCCAGCA ATCA TGCTGGCTTTTTCA       AAACAACAACCCACT 100 46
THICY_RS07005 NONE
THICY_RS07000 1562291 .. 1562321 - -11.9  -4.61231   TTAGACGGCTAAAAA       CAACAAACCCCGC GACAT GCGGGGTTTGTAA       TCTGTTCTGAGGCTA 100 50
THICY_RS06995 1561549 .. 1561560 -  -5.8  -2.54896   TTCCTAGTCAACCTA                GCTC CGAA GAGC                 CCAGGTTATTAACGT  53 34
THICY_RS06990 NONE
        ychF 1559792 .. 1559811 -  -5.8  -3.47322   GCGTATTATAAGGAA            GTTTTAAC GATT GTCAAAAC             ATTCTTACACATTAA  60 30
THICY_RS06980 1559662 .. 1559676 -  -7.8  -5.64274   CCAGGCATAAAAAAA               GCGCCT TAA AGACGC               TTAATTTATTGAAAT 100 40
THICY_RS06975 NONE
THICY_RS06970 NONE
THICY_RS06965 NONE
THICY_RS06960 NONE
THICY_RS06955 1552872 .. 1552892 -  -3.9  -5.47159   CTTTAACACAAAAAA            CTAGCGC CCTGACC GCGCAAG            AATTTCGTTTTCTAC  83 355
THICY_RS06915 1546757 .. 1546778 -  -3.7  -3.65046   TGGCCACTCGAACAA           CTGAACCCAC CTA GCGAGTTC-G           CTTAAAGGTTTCCTC  53 14
THICY_RS06905 1545312 .. 1545333 -  -2.3  -3.45321   ACTTATAATCCATAA           TTAAAATGG ACGA CCATTCAAA            CGGCGACGTTCACGT  46 4
THICY_RS06900 1544823 .. 1544836 -  -8.1  -5.88565   CTCATAACAAAAAAA               CCTGC ATAT GCAGG                TTTTCCACAATCAAC 100 55
THICY_RS06895 NONE
THICY_RS06890 1540925 .. 1540941 -  -2.2  -3.33696   GTGTGCTCTAACCAA              CTGAGC TAGGG GCCCAA              AGAAAAGACTGTTTT  45 130
THICY_RS06885 1540728 .. 1540738 -  -2.4  -2.50381   GAAGTTATTAAAATT                 GCCG ATG CTGC                 TAATGACGAACCCAC  39 150
THICY_RS06865 NONE
THICY_RS08675 1536902 .. 1536919 -  -7.7  -4.62069   TTTTTATTTTAAAAA             CTGGCAC TGGC GTGCCAA              AGAAAGAATCCACAA  83 108
THICY_RS06860 NONE
THICY_RS06855 NONE
THICY_RS06850 NONE
THICY_RS06845 NONE
THICY_RS06840 1531957 .. 1531973 -  -5.1  -2.78384   TTCGCTCCGACGACA              TGGCATG ACT CATGGCA              CATTCACCTGATCGG  50 18
THICY_RS06835 NONE
THICY_RS06830 NONE
THICY_RS06825 NONE
THICY_RS06820 NONE
THICY_RS06815 NONE
THICY_RS06810 1523875 .. 1523894 -  -7.2  -3.61774   GACAATATCCTTAAA            GCTTCCAA AGCT TTGAAAGC             GATGGGCCATCCATT  67 361
THICY_RS06795 NONE
THICY_RS06790 1521520 .. 1521535 -  -2.5   -4.4874   CTCAAAAACTCAAAA              CCGCT AAGTAA AGCGA               GCTTGCTGTTCGTCT  60 13
THICY_RS06775 NONE
THICY_RS08655 1516496 .. 1516547 -  -4.5   -5.1356   CTTGATGAAGAAAAA GCTGAAAAGCGCCG-TCAGCAATGG CAAG CCCTTG-TGATCAGCGCCTGTGAGC AATCTGGCCGCTGCG  80 353
THICY_RS06750 NONE
THICY_RS06745 1511855 .. 1511883 - -16.7  -3.47573   GCATCTATATGACAA        GGCCGAGCGTGCG GGT CGCAAACTCGGCC        ATATCAATGTATTAG 100 115
THICY_RS06730 1508440 .. 1508453 -  -4.5  -5.00616   CCCTGCCTGAAAAAA               CCAAC CTAA GCTGG                CGCAGTCTTCACCCC  77 83
THICY_RS06695 NONE
THICY_RS06690 1500747 .. 1500769 -  -4.8  -3.35813   CTCTATTTCAAGCAA           TCGGGCTT ACAAGAA ATGCCCGA           TTAGTTGTGATTAAA  54 26
THICY_RS06685 NONE
        glgC NONE
THICY_RS06675 NONE
THICY_RS06670 NONE
THICY_RS06665 NONE
THICY_RS06660 NONE
THICY_RS06655 1489007 .. 1489037 - -12.7  -3.11218   TGAAATACGCCAAGA      GGCGCAC-AGTTAG TTGC CTAACTTGCGCGCC       ATTGTAGCAGAAGTT  91 71
         ffs NONE
THICY_RS08650 NONE
THICY_RS06645 1486509 .. 1486522 -  -3.8  -4.57341   AATTGCGCTTAAAAA               GGCA ACTTCA TGCC                ACCAGGCAGATTCAA  66 5
        recR 1485814 .. 1485854 -  -6.1  -2.92792   ATGGACCGCAAAGTA  TTGTTTGGCAAGAAGCCGA GAA CCGTCTTCATGCCCAAAAA  GCTTTACTTGAAACC  53 58
THICY_RS06625 NONE
THICY_RS06620 1482352 .. 1482389 -  -9.1  -3.75332   ATGGGGCAAGGGAAA   CGCCAACGC-CTGTGCCA ATT TGGTCCAACGCGCTGGCG   ATAATAGTATTAATG  76 35
THICY_RS06615 1481512 .. 1481525 -  -5.2  -3.55761   TACCTAGGCTTTAAA               CCGC TTTGGG GCGG                CTAACCAGGCATCCA  57 0
THICY_RS06560 1470097 .. 1470115 -    -3  -3.05715   AATGCCGCCATTTAA             CGCTGC CGATATT GCGGCG             CTTTATACTGGGTCG  44 3
THICY_RS06555 NONE
THICY_RS06550 NONE
THICY_RS06545 NONE
THICY_RS06540 NONE
THICY_RS06535 1466949 .. 1466982 - -15.5  -4.29738   CGATACTCAGTAAAA     TAGTAATAAAGGGGC TAAC GCCCCTTTATTACTT      TATATGCCTACTAAG 100 25
THICY_RS06525 NONE
THICY_RS08645 NONE
THICY_RS06515 NONE
THICY_RS06510 1461464 .. 1461479 -  -3.3  -3.06265   ACCTTATAAATCAGA              TGGTT AACTGA AACCA               GCCAAGAAAAATAGC  46 78
THICY_RS06505 1460001 .. 1460013 -  -2.7  -3.82519   ACTACTCATAAAAGA                CTATA ACG CATAG                TAGGGTACGACATCA  51 13
THICY_RS06500 NONE
THICY_RS06495 1458457 .. 1458467 -    -4  -2.53271   TGACTTTTACAACAT                 TCTT ATC AAGA                 TTATAGGAACGCTTC  44 26
THICY_RS06490 NONE
THICY_RS06485 1455891 .. 1455906 - -10.4  -5.84381   TGACCAATAAAAAAA              CCCAGC TCGT GCTGGG               TTTTTTATTAGTTTT 100 99
THICY_RS06460 1451455 .. 1451473 -  -5.2  -5.60993   CCGCCTACAAAAAAA             TAGCTCCA TAT CGGAGCTT             TACAGTCATGTTTAT  85 79
THICY_RS06455 1450962 .. 1450985 -  -4.6  -5.37593   CTGGAAACTAAAAAA          CCGCCCACAAT AAC ATTA-GGACGG          TTTTCTAAACAATCT  81 57
THICY_RS06425 1443655 .. 1443675 -  -2.5  -4.09685   GCCCAGCGGCTAAAA            TCATCGC GTGCATA GCGAAGA            TCCCTCACAATAGGC  55 5
THICY_RS06420 NONE
THICY_RS06415 NONE
THICY_RS06410 1441827 .. 1441853 -  -5.9  -3.60814   AAACGCCACATATAA        GTTTACTCTGCC AACT GGCGG-GTAAAC         ACCCAATCCTGCTCA  62 1
THICY_RS06350 NONE
THICY_RS06345 NONE
        gatB 1428029 .. 1428049 -  -8.5  -3.15861   GATGATGCTCATCAA            TTAAAAAAC TTA GTTTTTTAA            TTTTTCTTGCAACAA  68 14
THICY_RS06335 1426993 .. 1427008 - -11.8  -5.24129   TTCGGTCATAAAAAA              CCCGGC TGAT GCCGGG               TTTTTGTTAAAGACT 100 55
THICY_RS06325 NONE
THICY_RS06320 NONE
        panB NONE
THICY_RS06310 1422732 .. 1422746 -  -8.6  -2.94551   AAAATTACGCATACA               CGCAAT ACG ATTGCG               CCGCTAAAAACCGCC  69 53
THICY_RS06280 NONE
THICY_RS06275 NONE
THICY_RS06270 1411101 .. 1411115 -  -4.2  -3.34431   AAAACACTCGCAGAA               GCCG TTATGGC CGGC               AACCAGCTGGCACGA  50 433
THICY_RS06255 NONE
THICY_RS06250 NONE
THICY_RS06245 NONE
THICY_RS06240 NONE
THICY_RS06235 NONE
THICY_RS06230 NONE
THICY_RS06225 NONE
THICY_RS06220 1401945 .. 1401955 -  -6.8  -2.66451   ACTCATTTAAATTCA                 CTGG CCA CCAG                 GGTAGATACCCAGCC  56 2
THICY_RS06215 1400371 .. 1400384 -  -3.7  -3.34716   TGACCCTGCAAAAAG               GTGCC AGCA GGCGC                TTGCTTGCAAAGGGC  48 417
THICY_RS06195 NONE
THICY_RS06190 1396071 .. 1396118 -   -10  -2.86202   CTCATAGTAAAATAT CTCAAGAAGATCACCTATCG CCTAAAAT CTATTGGCGACCTTCTTGAG GTTTTTGATACAGTC  74 59
THICY_RS06180 NONE
THICY_RS06175 1380393 .. 1380408 -  -4.6  -4.88222   ACTAAAAGGCAAAAA              CGTCCG CGCC CGGATG               TTATAAACCCGCTCA  73 87
THICY_RS06160 1376714 .. 1376730 -  -5.1  -3.39018   TCAGTATGCCAAATA              CCCTAAA AAT TTTTGGG              GAATAAATAAAGAGA  56 121
THICY_RS06155 1375646 .. 1375659 -  -3.8   -2.6006   AACTCATGCCACAAC               GGGT ACCTCA ACCC                AGCGTAACAATTCGG  45 0
THICY_RS06150 NONE
THICY_RS06145 1374196 .. 1374206 -  -3.2  -2.66373   AACGGGAAGAACTCA                 GTCA TGG CGAC                 CTCGCGGATCTTGCT  43 12
THICY_RS06140 NONE
THICY_RS06135 NONE
THICY_RS06130 NONE
THICY_RS06125 1367985 .. 1368002 -  -7.7  -3.30701   CTCTATCAAACCCAA             CCCAACC AACA GGTTGAG              CTACTCATCACGCGC  64 81
THICY_RS06105 1364888 .. 1364917 - -11.5  -4.88405   AACTGTCAAACAAAA       CAGTCAGGCTAAA TAAA TCTAGCCTGGCTG        CAATAACCACCAAAA 100 55
THICY_RS06100 1364690 .. 1364727 - -14.3  -6.20267   GCAAAAATAAAAAAA   CGCGGGTAGTTATTCAGG CAT CCTGA-TAACAACCCACG   CTTTGTCAATAATGG 100 38
THICY_RS06095 1363928 .. 1363939 -  -2.2  -4.28254   TGGCAATATCCAAAA                CCAC ATCA ATGG                 CGTTGGTTTAGATAA  57 293
THICY_RS06065 1357980 .. 1357995 -    -9  -3.79021   TAAAATTGCATTAAA              GGTGCA ATAT TGCACC               AAAATAAAACATCAA  76 44
THICY_RS08635 1357020 .. 1357040 -  -8.2  -4.96848   GGTTTGAGATAAAAA            GCAGGCCC GCGAG GGGCCTGA            AAAAACCTTGCTTGC  90 125
THICY_RS06040 NONE
        glyS NONE
THICY_RS06030 NONE
THICY_RS06025 1349610 .. 1349628 -  -2.4   -3.1506   AAACCGGCTCAGCAA             CTTCAATC TTT GATTGATA             CCCGCCATTTATGTT  43 180
THICY_RS06010 1346405 .. 1346415 -  -6.8  -3.48924   TTACGTCCTATACAA                 CCTC TGC GAGG                 TCACCTTTTTCTTCG  63 7
THICY_RS06005 1344493 .. 1344510 -  -5.5  -3.91798   CAAGCTCTAACTAAA             GCAATCG CCAC CGATGGC              GTCGTCATTATTGAC  61 130
THICY_RS05995 NONE
THICY_RS05990 NONE
        ileS NONE
THICY_RS05980 1336576 .. 1336586 -  -2.4  -4.35885   ATTGATGATAATAAA                 CGCC ACG GGCT                 TAATGACTATGATGC  61 262
THICY_RS05960 NONE
THICY_RS05955 1327350 .. 1327390 - -12.1  -4.92757   TCATCAACAACAAAA  CTCCGTATATTTACGTA ATAATTA TACGCAATTATACGGAG  ACTTTAAAATTATTT 100 52
THICY_RS05950 NONE
THICY_RS05945 NONE
THICY_RS05940 NONE
THICY_RS05935 NONE
THICY_RS05930 1320411 .. 1320423 -  -3.3  -4.21768   TAACCAATGCCAAAA                TCAGC ACC GCTGC                AACGGATGTGAATAA  60 492
THICY_RS05920 1318817 .. 1318833 -  -6.5   -2.9155   CGCCTCAATATTACA              GGCCAAG CTA CTCGACC              ACAGTTTGTGTTTTA  54 453
THICY_RS08630 NONE
THICY_RS05895 NONE
THICY_RS05890 NONE
THICY_RS05885 1308560 .. 1308579 -  -2.2  -3.64915   TTGCACAAACTATAA            GAC-CTTGA TTT TCAAAAGTC            AAAGTTTTGTTGCTT  48 65
THICY_RS05880 1307350 .. 1307360 -  -3.2  -3.98775   AGAAATGCAATCAAA                 GTCG AGC CAAC                 GAGTTTACGCCATGG  58 185
THICY_RS05870 1306167 .. 1306182 -  -3.2  -3.35073   ATTATTGCCAACGAA              GCAACG TCGT CTTTGC               CACCGTTATCAACTG  48 260
THICY_RS05860 NONE
THICY_RS05855 1301357 .. 1301376 -  -4.2  -3.34344   GCACTGGGCAACGAA            GTGCTTGG CAAA CCACACAC             ACATACCCAAGCATT  50 351
THICY_RS05845 1300440 .. 1300453 -  -2.3  -4.59773   TTTTACTCCTAAAAA               TGCAG AATT CTGCG                GTACTAAATTTTAAA  61 52
        rpmF NONE
THICY_RS05835 NONE
THICY_RS05830 1298216 .. 1298226 -  -2.4  -2.89971   TTTAATAACGAATGA                 GCGC AGA GCCC                 CAAGTGAAACCACCA  42 1
THICY_RS05825 NONE
        fabG 1296356 .. 1296366 -    -4  -3.01329   CGAATTAATAATAAT                 GAAA AAA TTTC                 GCTTATTTTGTACTG  47 121
THICY_RS05815 1296053 .. 1296066 -  -8.1  -6.30182   TTAGACAAAAAAAAA               GCCGT TTTC ACGGC                TTTTCTTAGCAAGAA 100 52
THICY_RS05810 NONE
THICY_RS05805 NONE
THICY_RS05800 NONE
THICY_RS05795 1291237 .. 1291258 -  -3.7  -3.35298   TAATTAAATTACCAA           GATGTCAAT CACG AGCGACATC            ACTAATTACGATTCA  49 27
THICY_RS05790 NONE
THICY_RS05785 NONE
THICY_RS05780 NONE
THICY_RS05775 NONE
THICY_RS05770 1286307 .. 1286323 -  -4.4  -3.92641   AAGCGTAGCGATAAA             GGCACGC TGAT GC-TGCC              GCCATTACGCATCAT  57 118
THICY_RS05755 NONE
THICY_RS05750 1283727 .. 1283743 -    -3  -3.59262   GGCCATATGCGCAAA             GGT-CCT AAGG AGGCACC              CCATTCATCTTATAA  49 56
        sucC NONE
THICY_RS05735 NONE
THICY_RS05730 NONE
THICY_RS05725 1279184 .. 1279196 -  -4.1  -3.30441   GACTATTGCTCACAA                GGTAA TCC TCACC                AAAGTACCGCAATCC  49 7
THICY_RS05720 NONE
THICY_RS05715 NONE
THICY_RS05710 1276386 .. 1276397 -  -5.8  -3.92602   TCAATATTTTATAAA                CCCA ATAC TGGG                 TGCTGTAGCCTGTCT  66 7
THICY_RS05700 1273662 .. 1273674 -  -3.3  -4.35524   GTGTTAAAGCTAAAA                CGCAG CGA CTTCG                AACCCCTAATCGATA  63 205
THICY_RS05670 NONE
THICY_RS05665 1269603 .. 1269613 -  -5.4  -2.61264   TGCGGTACTCATAAT                 TCGA TTC TCGA                 TAGGGCTAAAAATAG  51 44
        rimO 1268236 .. 1268251 -  -5.4  -3.41587   GTGCATAAAATTTAA              CCTAGG TAAG CCTAAG               GTTATTTCGTGTCCA  57 27
THICY_RS05655 1267642 .. 1267657 - -10.4  -5.46706   AGCCTAAAATAAAAA              CCCGCA TAGC TGCGGG               TTTGGGTAACACGGA 100 84
THICY_RS05650 NONE
THICY_RS05645 1265767 .. 1265782 -  -2.5   -3.5032   TTGTGAGATTAAATA              CGGTC GCTTTT GACCA               GATGTTGAAATTTTT  47 3
THICY_RS05640 1264972 .. 1264998 -  -8.7  -3.67134   AAACGACGGTAATAA         CGACGGCGAAA GCCTG TTCCGCCGCCA         CTAACAACCACAACC  74 49
        clpS NONE
        clpA 1259602 .. 1259619 -  -2.8  -3.50553   TAACATTATTAAACA             TATAAG CTAGTT CTTATA              TTTTAAACAGATTAC  47 37
THICY_RS05610 NONE
THICY_RS08625 1250392 .. 1250407 -  -6.8   -5.4505   GTCTCCAATAAAAAA              CCCAGC TTAC GCTGAG               TTTTTTATTAGGTAA  89 52
THICY_RS05590 1246182 .. 1246232 -  -3.3   -5.1167   AACCGAATACAAAAA GCCGCGCAATTAAGCGCAATTAAG CTGA CTTAATCGC-CGCTATCGCTCGAC TTCTCATTCATGCGT  71 4
THICY_RS05580 NONE
THICY_RS05575 NONE
THICY_RS05570 NONE
THICY_RS05565 NONE
THICY_RS05560 NONE
THICY_RS05555 NONE
THICY_RS05550 NONE
THICY_RS05545 1234668 .. 1234678 -  -6.8  -2.91668   ATGATGACAGTAAAT                 GCCA TGT TGGC                 TAACCTTTTAACTTG  58 25
THICY_RS05540 NONE
THICY_RS05535 NONE
THICY_RS05530 NONE
THICY_RS05525 NONE
THICY_RS05520 NONE
THICY_RS05515 1231070 .. 1231087 -  -5.5  -2.58999   TTGTGATAGACGAAT             CACGTCG TGTG CGACCTG              GAGAACTCCACTATG  48 151
THICY_RS05500 NONE
THICY_RS05495 NONE
THICY_RS05490 NONE
THICY_RS05485 1222266 .. 1222289 -  -8.2   -3.2029   AAGTAATACAGGCAA          TCGCTAACTA ATCT TGGTTAGCGA           TACTCTCTAACAAGG  68 9
THICY_RS05470 1220832 .. 1220852 -  -8.2  -2.72144   CTATGTGCGCGAAAT            GCCGCCGA TGGCT CCGGCGAC            TGGCGCCTTTATGAC  61 402
THICY_RS05450 1216167 .. 1216180 -  -5.3  -2.62442   AGTTAACAGACCAAC               TAGCA GGCC TGCTA                TCGGCTTACTTTGAG  51 31
THICY_RS05435 1211981 .. 1211994 -  -3.7  -4.54727   GCTGGGAAATCAAAA               GCCTG CGCG CGGGC                AAGGTGCAAATCAAC  66 353
THICY_RS05425 NONE
THICY_RS05420 1210702 .. 1210714 -  -4.8    -3.794   GTTTAATTTAGTAAA                GCGT AAAAG ACGC                ACATATAGGAAAGAT  60 404
THICY_RS05410 1210065 .. 1210083 -  -3.8  -3.77464   AGATTACCGAGCAAA             CCATTGGC CTG GCAAATGA             ACTACTCGAACAGGC  55 63
THICY_RS05395 NONE
        dnaK 1204736 .. 1204757 - -14.5  -5.03314   CTTATGGTTAAAAAA           CAACGGCTC ATAA GAGCCGTTG            TCGGTTGTCACGCAT 100 67
THICY_RS05385 NONE
THICY_RS05380 1202521 .. 1202552 - -13.8  -5.60993   TTGCTTATAAAAAAA      CGGAGTTAACCCCC AATT AAGGGTCAACTCCG       TCCTAAATAATGTCT 100 157
THICY_RS05375 NONE
        carB 1198053 .. 1198078 - -13.3  -3.92659   TCCTTAAAATGCAAA         GAAGCCGGCAC CAAG GCGCCAGCTTC          TGCAACAAGTGTAAC 100 48
        greA NONE
THICY_RS05360 1197012 .. 1197026 - -12.8  -6.30182   TTAGACAAAAAAAAA               GCCGGC TAA GCCGGC               TTTTTGAGATGCATC 100 58
THICY_RS05355 NONE
THICY_RS05350 1194747 .. 1194759 -  -6.9  -3.09581   TAAACGTTTAACAGA                GGGCG GTA CACCC                GGCCTTTAAACCAAG  62 480
THICY_RS05335 1192408 .. 1192421 -  -9.5  -4.75404   AAAGCCCATTAAAAA               GCCCC TTCC GGGGC                TTTTTTTCTACTCAA  90 33
        glyA NONE
THICY_RS05310 NONE
THICY_RS05305 NONE
THICY_RS05300 NONE
THICY_RS05295 NONE
        ribH NONE
THICY_RS05285 1183381 .. 1183391 -    -4  -3.77588   ACTCCATAGCAATAA                 TTAG CGA CTAA                 ATTCTGCGGCACGCA  55 15
THICY_RS05280 1182049 .. 1182061 -  -4.8  -4.70626   CAAGAACTGCAAAAA                GCTG GGGTG CAGC                CGAAACTGATGATTG  73 353
THICY_RS05270 1180485 .. 1180497 -  -7.7  -3.14931   TGGAGTGTCTATCAA                GTGCA TTT TGCAC                TCACAAAACGTGAGG  62 289
THICY_RS05245 1176831 .. 1176841 -  -2.6  -3.65084   AATTAAACCTGTAAA                 TTAA ACC TTAA                 CTTGCCACACAACTG  49 46
THICY_RS05240 NONE
THICY_RS05235 NONE
THICY_RS05230 NONE
THICY_RS05225 1172549 .. 1172564 -  -5.4  -2.90075   CTTGTTGCAATGAGA              CCGCCAG CAC CTG-CGG              TTATTTAAAATGCGT  53 26
THICY_RS05220 NONE
        ruvB NONE
THICY_RS05210 1170192 .. 1170218 -  -5.3  -2.52516   TTTTTTATCACGAAT        TGATC-GTAAAC TGGT GTTCACAGATCA         CTCCTTCTAGTTCGA  50 32
THICY_RS05205 1169761 .. 1169782 -  -2.1  -2.72147   TTTAATATAACTAAT           CACACCCCG TCCT CCGGTTGCG            TCATTAATGAAACAT  40 3
THICY_RS05200 1168753 .. 1168763 -    -4  -2.54193   GAGCATTTCAAGGTA                 TTAG GGT CTAA                 ATACAAAACGTATCG  44 15
THICY_RS05195 NONE
THICY_RS05190 NONE
THICY_RS05185 NONE
THICY_RS05180 1165287 .. 1165300 -  -2.4  -2.94099   GGGGCGTATTATACA               TTCC ACCTCA GGAA                GCGCAAGCCTTTTCT  42 61
THICY_RS05175 1165156 .. 1165175 - -12.2  -6.28631   TAAAGCAAAAAAAAA            CCCCATCA AACA TGATGGGG             TTTTTAAATGTGGTG 100 36
THICY_RS05170 NONE
THICY_RS05165 1161609 .. 1161619 -  -5.4  -4.86001   ACCACGGCACAAAAA                 GCTT GGG AAGC                 GCTCAAACGCAACGG  78 488
THICY_RS05140 NONE
THICY_RS05135 NONE
THICY_RS05130 NONE
THICY_RS05125 NONE
THICY_RS05120 1151131 .. 1151165 -  -4.3  -2.81969   CTAATAATTCAATGA     GCGTAAACCCTTG CTGGCGATT CAAGGCTTAACGC     GTCCAATTGCCTATC  48 19
THICY_RS05115 NONE
THICY_RS08615 NONE
THICY_RS05105 NONE
THICY_RS05100 NONE
THICY_RS05095 NONE
THICY_RS05090 NONE
THICY_RS05085 1146368 .. 1146379 -    -3  -3.66968   AAGCAGATAAACTAA                TGAA AACC TTCA                 AAATTAACATACATT  49 39
THICY_RS05080 1144438 .. 1144451 -  -8.1  -3.62597   GTTAGTGTTCAACAA               CAGCC TAGA GGCTG                TTGTTGAAATGAAAA  73 75
THICY_RS05075 1142234 .. 1142244 -  -2.6  -4.95957   CAAACTAATCAAAAA                 TAAA TTA TTTA                 GAGTCTTATAGTTTT  67 109
THICY_RS05070 1140080 .. 1140108 -  -6.2  -3.41962   TTTAACAAATTAATA        GCTTATTCAAAC ATGAG ATTTAAATAAGC        ATACTTTTGAACAAC  60 294
THICY_RS05065 1138554 .. 1138572 -  -3.1  -3.90048   TGCTGCGCAAAAAGA            GGCGTCGC TGGA GC-ACACC             GGCTCAGCTCAGAGA  55 29
         tgt NONE
THICY_RS05055 1136783 .. 1136796 -  -9.5   -5.4505   GTGGCGAAGAAAAAA               GGGGC ATGA GCCCC                TTTCAAACACCAAGC 100 163
        secD NONE
THICY_RS05045 1133723 .. 1133751 - -16.9  -5.13343   CAAGTTAAAACAAAA        CAGCAGATCCAAC CTT GTTGAATCTGCTG        TGCATTATCATCCAG 100 49
        prfC 1131981 .. 1132003 -  -3.3  -4.09503   AAAGACATCAAATAA           CCAAGCCTC ATCCA GCAGCCTGG           TTGTTCCAACCAGGC  57 130
THICY_RS05030 NONE
THICY_RS05025 NONE
THICY_RS05020 NONE
THICY_RS05015 NONE
THICY_RS05010 NONE
THICY_RS05005 1124213 .. 1124231 - -13.2  -5.78622   TTAGGCGAAAAAAAA             GGGTGCTA ATT TAGCACCC             TTTACATTATATGGC 100 37
THICY_RS05000 NONE
THICY_RS04995 NONE
THICY_RS04990 NONE
THICY_RS04985 1120644 .. 1120660 -  -7.9  -3.53811   TTGACTTGGCTTAAA              GCTCTGG TAA CCAGTGC              TGCGCAACCCAATGA  68 4
THICY_RS04980 1120189 .. 1120201 -  -4.1  -3.01712   CCTTTCTTTTGAATA                GCAAG CCT CTTAC                CGCGATTATGCTGAC  47 31
THICY_RS04975 1120045 .. 1120064 -  -8.6  -5.68039   AAAGGTATAAAAAAA            GCCAGATA ATGT TATCCGGC             TTTCATTTAATTTGG 100 38
THICY_RS04960 1115568 .. 1115582 -  -4.3  -4.05714   ACCTGCAACTATAAA               GCTTA TTGAT TAAGC               GGTTGCTTCCGCTTC  61 20
THICY_RS04955 1114555 .. 1114603 - -12.7  -3.13504   TTGTTATGAAAATGA TAAAGCCCTGAGCCTGCCACCT GTCATT AGGTG-CAGACTCAAGGTTTTA AGATTTAACCCTGTG  91 30
THICY_RS04950 NONE
THICY_RS04945 1113082 .. 1113105 - -13.2  -3.71686   CTTAACTTAATAGAA          TAACGGCCCA AAGA TGGGCCGCTA           TTGTTGTCTCGAATT 100 76
THICY_RS04940 NONE
THICY_RS04935 NONE
THICY_RS04930 NONE
THICY_RS04925 NONE
THICY_RS04920 NONE
THICY_RS04915 NONE
THICY_RS04910 NONE
THICY_RS04905 NONE
THICY_RS04900 NONE
        rnhB 1102987 .. 1103003 -  -7.2  -4.56978   CGCGTAAACAAGAAA              CCGCCC TGATC AGGCGG              TTTTTTTATGCCTGG  79 56
THICY_RS04885 NONE
THICY_RS04880 NONE
THICY_RS04875 NONE
THICY_RS04870 NONE
THICY_RS04865 1097415 .. 1097426 -  -2.2  -3.86897   GCTAGGTTTCACAAA                GATG TGTT CACC                 TAGCTATATATTAGT  50 96
THICY_RS04860 1096945 .. 1096957 -  -4.1  -2.79302   ATGATGCCGAGGATA                CGCAA CGC TTGCA                CGCGCTGTATGAAAT  45 147
THICY_RS04840 NONE
THICY_RS04835 NONE
THICY_RS04830 NONE
THICY_RS04825 NONE
THICY_RS04820 1089491 .. 1089511 -  -7.7  -2.61582   CATGTGATTCACAAG            GACTTTGAT TTA ATCAAAATC            AATGACGTTTTACTT  58 24
THICY_RS04810 NONE
THICY_RS04805 NONE
THICY_RS04800 NONE
THICY_RS08610 NONE
THICY_RS04790 NONE
THICY_RS04785 1082740 .. 1082754 -  -5.8  -2.84801   GATTGTTAAACATGA               TTAACA CCT TGTTAA               CGGATCGGTTGCGTC  54 11
THICY_RS04780 1081931 .. 1081949 -  -6.1  -4.87037   AATATATATTAAAAA             TACACTA TCCGC TAGTGTA             TAAATTTTATACATG  79 142
THICY_RS04775 1081596 .. 1081620 -  -2.2  -3.21194   TAGAAACTCTACCAA          CTTGTAACTT TTTTG AAGTTTCAAA          TTTGATCCTCGTGCA  43 21
THICY_RS04770 NONE
THICY_RS04765 NONE
THICY_RS04760 NONE
THICY_RS04755 NONE
THICY_RS04750 1075432 .. 1075446 -  -2.8  -3.11222   CTTTAACCTTAAAAT               CTAGTA CTG TACTTG               GTATCCGCCACTAAG  44 11
THICY_RS04745 1074901 .. 1074921 -  -9.7  -3.02263   AGAGGGCTTGCAACA            GGATAACGC TAA GCGTAATCC            TAGCGTGCGCCCTGA  75 106
THICY_RS04740 NONE
THICY_RS04735 NONE
THICY_RS04730 1066756 .. 1066776 -  -4.8  -3.61268   CAGTCAAGGTGTAAA            TTCATGAG TTATC CTCATAAA            CATTAGAGTAAGTTT  57 6
THICY_RS04725 NONE
THICY_RS04720 NONE
THICY_RS04715 NONE
THICY_RS04710 NONE
THICY_RS04705 1061937 .. 1061955 -  -3.9  -3.55622   TTCAATCGCTTCAAA            CAGG-TGT ACCG ACAACCTG             AAGAACCTACGCCAG  53 32
THICY_RS04700 1061389 .. 1061400 -    -3  -2.94099   CTCGCTTATCACAGA                TATC GCAA GATA                 CTGCGCAGATGAAAT  43 105
THICY_RS08605 1060961 .. 1060972 -  -7.2  -3.12942   CCGAGGAATAAAGCA                GGCC TGGT GGCC                 TTTGACTTCGGTCCA  62 160
THICY_RS04690 NONE
THICY_RS04685 1059986 .. 1059998 -  -4.1  -3.14211   ATTGCTTTTCATGAA                TAAGC CCA GCTCA                CCACACCAGGCCTGG  48 242
THICY_RS04680 NONE
THICY_RS04675 NONE
THICY_RS04670 NONE
THICY_RS04665 NONE
THICY_RS04660 NONE
THICY_RS04655 1055886 .. 1055903 - -12.7  -3.70689   CATAATCTCAAAAGA             TCCCGGC CTTC GCCGGGA              TGACATAAATAAAAA  95 90
THICY_RS04650 1054561 .. 1054579 -  -7.5  -2.90714   CGAAACTTCGAGAGA             TCCTGAA TCAAG TTCAGGA             TGACACCACCTTGTC  64 184
THICY_RS04645 1054246 .. 1054264 -    -3  -3.42346   AATACTTGATCATAA             GGATTCGC GAA GCTGATCC             GGCTCTTGCGCACGC  47 1
THICY_RS04640 1053764 .. 1053788 -    -3  -4.00308   AAAAACAAAGTTAAA          CTTTTATTTT ACCCG AAAATAAACG          TGTCATGTCCACCGT  53 82
THICY_RS04635 NONE
THICY_RS04630 1053085 .. 1053098 -  -8.1  -6.38492   ACCAACAAAAAAAAA               CGCCT AAAC AGGCG                TTATTATGCTGAATA 100 61
THICY_RS04625 1052306 .. 1052324 -  -7.5   -2.8806   AAAGCCCTCGAGAGA             TCCTGAA ACAAG TTCAGGA             TGACGGTGCTGGGTT  62 93
THICY_RS04620 NONE
THICY_RS04615 1051513 .. 1051539 -   -13  -5.93252   CCCAAAAACAAAAAA         GGCAACGGCATC AAC AATGCCGCCGCC         ATTACTTTGATTAGA 100 90
THICY_RS04610 NONE
THICY_RS04605 1050683 .. 1050701 - -14.6  -5.63236   ATCCAAAAACAAAAA             CGCCGGAT TCC ATCCGGCG             CAAAACGCTATCCAA 100 51
THICY_RS04600 1050124 .. 1050135 -  -4.4  -2.52896   CCAGCTTCCAACTCA                TTGG CTTA CCAA                 ACTAACTCAGTATCA  47 19
THICY_RS04595 1049743 .. 1049761 -  -7.5  -2.92389   GAATCTATCGAGAGA             TCCTGAA TCAAG TTCAGGA             TGACGGTGCTGGGTT  64 125
THICY_RS04590 NONE
THICY_RS04585 1049003 .. 1049021 -  -8.8  -5.61881   CCCCAAAAACAAAAA             CGCCGGAT TCA ACCCGGCA             TTTCAAAACACACAA 100 223
THICY_RS04575 NONE
THICY_RS04570 1045236 .. 1045251 - -10.4  -5.52096   AAACTCAATAAAAAA              GGGTGC GATT GCACCC               TTACTTGACCAGACC 100 122
THICY_RS04565 NONE
THICY_RS04560 NONE
         rnc NONE
THICY_RS04550 NONE
THICY_RS04545 NONE
THICY_RS04540 NONE
THICY_RS04535 1038652 .. 1038673 -  -7.9  -3.55071   CTAGATCCCGGCAAA           GCGCCTGCC CACT GGCAAGCCC            TCTTGACCCAGATTC  66 399
THICY_RS04495 NONE
THICY_RS04490 1028606 .. 1028648 - -11.5  -3.33761   TAAGCCACACAAAAG TTTTTAGGGCAAGCACAAA GATTT TTTGCGCCCACCCCAAAAA GACCGACTCTTCAAG  84 54
THICY_RS04485 NONE
THICY_RS04480 1026539 .. 1026554 - -10.4  -5.64421   ACGCTAAATAAAAAA              GGGAGC CAAA GCTCCC               TTAATTATGGGTTTA 100 69
THICY_RS04475 NONE
THICY_RS04470 1023886 .. 1023901 - -10.4  -5.59655   TAAACCAACAAAAAA              CCCCGT AAAA ACGGGG               TTCTCAATTATCAAA 100 165
THICY_RS04465 NONE
        nusA NONE
THICY_RS04455 NONE
THICY_RS04450 1019000 .. 1019014 -  -2.8  -2.50816   GTCTGACTCATGAAT               TAATGC AAG GCTTTA               CGAATTAGCGCCTCA  41 10
THICY_RS04445 NONE
THICY_RS08600 NONE
THICY_RS04435 1016582 .. 1016612 -  -4.1  -3.41569   CGATCGATTTAAAGA      CATCGTTTCCGCGA CCGA TAGCAGAAA-GATG       TTAGCATTATCCATG  51 82
THICY_RS04430 1016227 .. 1016269 - -13.5    -3.315   ACGTGGATAGAAAAT CGGCCACAAAAAAGCCCCG ACCAG CGGGGCTTTTTTTCAGGCG CTAACCTAGCAATTA 100 38
THICY_RS04425 1013891 .. 1013904 -  -6.7  -6.02919   TCACAAATAAAAAAA               CCGTT TTGC AACGG                TTTTGGTTGTATGGG 100 176
THICY_RS04420 1010900 .. 1010917 -  -6.9  -5.10029   AGCAACTCTAAAAAA             TTCCCGC AATA GCGGGGA              TTTTTCATCGCTACA  85 68
THICY_RS04410 1007799 .. 1007815 -  -2.1  -3.26444   GCGCCGAACAATATA              CGCCATC ATA GCTTGCG              CCCTCCCGTGTTAGT  45 14
THICY_RS04405 NONE
THICY_RS04400 NONE
THICY_RS04395 1004813 .. 1004823 -  -6.8  -4.03234   TTCCTCTTATATAAA                 CGGT ATA ACCG                 CTAAACGGAATACGA  69 6
THICY_RS04390 1002735 .. 1002747 -  -2.7   -4.6902   TGACAACGCCAAAAA                GCTTT ATG AAAAC                GTACGTGGAAATTAC  68 460
THICY_RS04375  999158 ..  999171 -  -6.7   -3.5394   AAATCTTCTGTGAAA               GAAGG TAGC CCTTC                TTTTAGACCTAGCTC  63 195
THICY_RS04370  998652 ..  998670 -    -6  -3.85878   CAACAATATTAATAA             TGTCATAC AGT GTAAGACA             GGTTGAAAAAAGGCA  64 133
THICY_RS04365 NONE
THICY_RS04360  997959 ..  997970 -  -2.2  -2.90496   TGTCCTGGCAAATCA                GCAA TAAT TCGC                 CCCTTGTATTTACCG  42 115
THICY_RS04355  996488 ..  996534 - -14.7  -3.27406   TCTTTAGCAGAAAAC TA-TAAAAGACGCCCCGTGTTG ATAG CAATCCGGGGCGTCTTTTAGTA ACAACATATTGTAAT 100 69
THICY_RS04340 NONE
THICY_RS04335 NONE
THICY_RS04330  991004 ..  991020 - -10.1  -2.60813   GATCGCTTTAAAGAT              TGGGCAC ATG GCGCCCA              CATGACTTTAAAACA  69 122
THICY_RS04315 NONE
THICY_RS04310  986999 ..  987014 -    -9  -5.26875   CTTCCAATGAAAAAA              CCCTCA TCAC TGAGGG               TTGTTGAGACGAATT 100 44
THICY_RS04305  983030 ..  983044 -  -2.8   -4.4518   AACTAAAAGCTAAAA               CAAAGT CAA ACCCTG               CTCTTTCATCTTACA  60 85
THICY_RS04300  980980 ..  980995 - -10.4  -4.81359   AATTGAAATACAAAA              CCCAGC CGAA GCTGGG               TTTTTATCGACTAAA  91 55
THICY_RS04295 NONE
THICY_RS04290 NONE
THICY_RS04285  977636 ..  977650 -  -5.7  -3.67597   GGTGGTATTGAACAA               GGCTT TCAAC AAGCC               AGAGACATCTTAACT  61 185
THICY_RS04275  975822 ..  975871 -  -6.8  -2.84812   AGGGATACGATGATA TTCAATCTTTGGTGCTTTCGCCTT GAGT AAGGCGAAAGTAC-AAA-ATGGAA GCACAAGTCTGACCT  57 66
THICY_RS04270  974188 ..  974203 - -10.4  -5.18726   CTTTGATAACAAAAA              CCCCGT AAAA ACGGGG               TTTTAAGTTAACGCA 100 75
THICY_RS04265  971784 ..  971810 - -14.6  -2.94194   TACAAACCTCACATA         CTAATGCGCATA AAA TATGCGCACTAG         CTAAATTAACAGATT  95 59
THICY_RS04260 NONE
THICY_RS04255  971138 ..  971152 -  -5.6  -3.54424   CTTGAGCTGCTCAAA               GCAGGC GCA GCATGC               CGATATCGAGGTGCT  57 83
THICY_RS04235 NONE
THICY_RS04230 NONE
THICY_RS04225 NONE
THICY_RS04220 NONE
THICY_RS04215  962078 ..  962094 -  -5.3  -4.13014   TCTATACTTTTAAAA              TAAAATT GAG AATTTTA              TGGTGCGCGATTAAC  65 23
THICY_RS04210 NONE
THICY_RS04205 NONE
        rpsA  958249 ..  958269 - -14.1  -5.13722   GTCATTAAAACAAAA            CCAGCTCAT AAT ATGAGCTGG            TTTGTTAGCGAACAG 100 49
THICY_RS04195 NONE
THICY_RS04190 NONE
THICY_RS04185  956666 ..  956684 -    -6  -3.46081   GAGTGAAGCAAGGAA             TTCGAGCA ATT TACCCGAA             AGGCGAGATTATAAA  60 90
        rpsF NONE
        rpsR NONE
THICY_RS04170 NONE
        rplI  954601 ..  954615 - -11.4  -6.19443   CATAGCAAAAAAAAA               CCGAGC TAA GCTCGG               CTTTTTAATCAGATT 100 50
THICY_RS04160 NONE
THICY_RS04155 NONE
THICY_RS04150 NONE
THICY_RS04145 NONE
THICY_RS04140  949400 ..  949432 -  -9.3  -3.07344   TGATCCGTTAATATA      TTTGTGGCTATTTTA TTG TAAAATAGCCACATT      AAACTCTATTTACAA  74 271
THICY_RS04110  943932 ..  943957 -  -7.7  -5.48825   GATCATCTAAAAAAA         GCGGTAGATAGA CAT CCTAT-TACCGC         TTTACGCTTTTCAAC 100 59
THICY_RS04090 NONE
THICY_RS04085 NONE
THICY_RS04080  938641 ..  938655 -  -5.6  -3.25072   TTCAGCATAATGTAA               CCGGCA CAG CGCCGA               TTAATCTGAATAACC  52 56
THICY_RS03920 NONE
THICY_RS03915 NONE
THICY_RS03910 NONE
THICY_RS03905  905826 ..  905842 -  -5.1   -3.1875   GATACCGGAAGCTAA              CCTGCAC CTG ATGCAGA              CCCATTGGCCGGTTG  52 360
THICY_RS03800 NONE
THICY_RS03795 NONE
THICY_RS03790  889157 ..  889172 -  -2.5  -2.91582   GATCTGAGCCATAGA              TACCC TCACAT GGGCA               AAAAGGTTAAGGGGG  43 55
THICY_RS03785 NONE
THICY_RS03780  887267 ..  887292 -  -9.1  -4.57073   TACTGCTGTTAAAAA         CTATGACGGCAG GGC CTGCCATCA-AG         CGTCAACGCTTATTT  90 445
THICY_RS03755 NONE
THICY_RS03750  878346 ..  878369 - -10.2  -3.00946   TTTTGCCACAAATTA          CGGCGGCAGC CTTT GCTGCCGCTA           AACCTGTTGCGGACC  72 355
THICY_RS03735 NONE
THICY_RS03730 NONE
THICY_RS03725 NONE
THICY_RS03720  870863 ..  870890 - -10.6  -2.84325   GTTGTCTAAATATGA        CCTGCGTCTTAC TTAG ATCAGACGCAGG         TAATCCAAACGCAGT  76 10
THICY_RS03695  864844 ..  864855 -  -5.8  -2.73364   TGCTCATGCCAATGA                GCCT AGCG AGGC                 CAGAAAAAGCGATCT  51 476
THICY_RS08590  862323 ..  862341 -  -2.4  -4.08216   TTATTGTCTTCAAAA            GGCGGCT GGGGTG AG-CGCC             TTTTTCTAGAGTCAC  55 297
THICY_RS03640  855189 ..  855215 - -10.9  -3.29649   ATTGCATTACAGCAA         GCCTTCCCC TGAGATTGC GGGGAAGGC         TTTGTTATTAAAAGC  82 33
THICY_RS03630  852914 ..  852939 -  -8.9  -2.92792   ATGGATTGCAAAGTA         TCCCGGTGGTG TTAT CGGCACCGGGA          ATTGATCCTGAAGAC  66 45
THICY_RS03595  844250 ..  844262 -  -6.9  -4.13767   TGTGGTATTGCAAAA                CGGCG GCT CGCCA                GCGGGTTATTGGTCG  68 203
THICY_RS03580  842161 ..  842183 -  -6.3  -3.30124   TCCTACCGCCGACAA           GCGACCACT GGCCG AATGGTCAC           TTGTATTTGGATTGA  59 59
THICY_RS03565 NONE
THICY_RS03545 NONE
THICY_RS03540  834450 ..  834462 -  -3.3  -2.94416   CATGGCGATCAGAGA                GGTAG CAC CAACC                CAAATTATTGCAAAT  45 68
THICY_RS03535  831962 ..  831973 -  -2.2  -3.15544   GTTTAGGCTTATTAA                CAGA AACC CCTG                 AGTTTTTCTTTAAAA  43 495
THICY_RS03520 NONE
THICY_RS03515 NONE
THICY_RS03510 NONE
THICY_RS03485 NONE
THICY_RS03480  821770 ..  821785 -  -3.2  -4.16943   TTTTATATGGCAAAA              GAAGCC AAAG GGCTTG               GGTTAGAAGAAAAGC  60 500
THICY_RS03460 NONE
THICY_RS03455 NONE
THICY_RS03450 NONE
THICY_RS03445 NONE
THICY_RS03435  814298 ..  814320 -  -9.8   -5.5074   TAATCTAACAAAAAA           CCCCGGCTCA GAT TAAGTCGGGG           TTTTTTGTGGCCTTG 100 51
THICY_RS03425 NONE
THICY_RS03420  808858 ..  808883 - -19.1  -3.59262   CGCCATATTTTGAAA         CGCGCTGGTTC AATG GAACCAGCGCG          TTTTTTTATGTCTGA 100 43
THICY_RS03375  802136 ..  802150 -  -2.8  -3.87354   GAAAGCTATACGAAA               CTTGTA TGG TACCAG               TGGGCGGACTCGAAC  53 17
THICY_RS03370 NONE
THICY_RS03360  800085 ..  800096 -  -5.8  -2.57463   AAGTGGGCTGAGAAT                GCCA GTAT TGGC                 TATTACGCGCAAGAT  51 495
THICY_RS03345  797757 ..  797770 -  -2.3  -3.63968   GTTTAAATGTTGAAA               GCCGT GGTG ACCGC                AACTTGGTGTGGCAA  50 112
THICY_RS03220  774835 ..  774853 - -10.3  -2.72511   GCTACTCGTTTAAAT             CGCGCTA GTAAT TAGCGCG             GTAATGCTACTTTAG  76 18
THICY_RS03145 NONE
THICY_RS03140  758891 ..  758912 - -10.9   -2.7566   AGTGAAGGTGAACTA           CCTCGCCTT AATA AAGGCAAGG            GTAATAAGCTGATTC  74 266
THICY_RS03125  755762 ..  755777 -  -7.5  -4.51174   TCATGAGAAGTAAAA              GCCCC GAGTTA GGGGC               TTTTTTGTCAATTAA  80 43
THICY_RS03105 NONE
        prfA NONE
THICY_RS03095 NONE
THICY_RS03090  749152 ..  749167 - -10.4  -3.63627   GCTCCACATCCTAAA              CCCCTC TAAT GAGGGG               TTTTTTTTTGCCTAT  81 49
THICY_RS03050  739003 ..  739023 -  -2.5  -4.37658   AACGGTGTTATAAAA            TCCTTAGCG GTC CAGCAAGGA            TCGACAGTATTTAAA  61 373
THICY_RS03010 NONE
THICY_RS03005  732503 ..  732519 -  -4.4  -3.66378   CATAGGTTAGGCAAA              CTCCGT TGTTG ACGAAG              AAATTAAGTCGGTCA  55 0
THICY_RS03000 NONE
THICY_RS02995  731049 ..  731077 -  -6.1  -4.09864   ACTTACGCCTTAAAA        TAATTCCCGACTA ATC TTATCAGGAATTA        GCTGGGTGACCAAGT  68 61
THICY_RS02990 NONE
        metG NONE
THICY_RS02980 NONE
THICY_RS02975 NONE
THICY_RS02970 NONE
THICY_RS02965 NONE
THICY_RS02960  723273 ..  723287 -  -4.2  -3.10164   GCACTCACCATTGAA               CTACTC ATA GAGTCG               AGCTCCTTCTTGGTT  50 11
THICY_RS02955 NONE
THICY_RS02950 NONE
THICY_RS02945 NONE
THICY_RS02940  720996 ..  721020 -  -9.9  -3.07005   AAGCAAGCTTCAATA          CCTAAGGCCGG TAT CCGGGCTGAGG          AGCATTTTCCTTTAC  76 221
THICY_RS02935  718939 ..  718958 -   -10  -4.74103   GGCTGAATGGAAAAA            GCCTGATC GAAT GACCAGGC             CTGGTTAGCGTTAAA  91 36
THICY_RS02930 NONE
THICY_RS02925  718186 ..  718203 -  -4.2   -3.6106   GTTAAGAGTTTGAAA             GATATG GCGGTT CATATC              CGACAATGCAATAGT  55 95
THICY_RS02920  717436 ..  717450 -  -4.2  -2.57344   GACCTTGGTCACAAT               CTGGTG ATA CACGAG               TTTGCGCACAAATTG  44 355
THICY_RS02910 NONE
THICY_RS02905 NONE
THICY_RS02900  714012 ..  714031 -  -4.9  -3.42437   GAATGCGAAAACACA            TGCCGGC CTGGTT GCGGGCA             GTATTCGCATTGTGC  52 203
THICY_RS02880  710982 ..  710992 -  -6.8  -3.69354   GCGTAGAAGGCGAAA                 TGCC TGC GGCA                 TTTAGTGGCACTACA  63 161
THICY_RS02855  704663 ..  704700 -  -5.7  -4.50058   TATTCACAATCAAAA   TCTCCATGACATAAAAC ACGC GATTTACATCATTGAGA    AGTTGGATGCTGATG  75 275
THICY_RS02820  697540 ..  697555 - -10.4  -5.64873   TTTAAGAATAAAAAA              GGCCTC ATAA GAGGCC               AAAACAACACACAGG 100 60
THICY_RS02775  685452 ..  685469 -  -7.7  -2.72344   TTGCATCGTCAATTA             GACTGCG TACT CGCAATC              AAGCGTGGTCTGGAT  58 307
THICY_RS02725  671504 ..  671524 -  -6.9  -2.56596   GTTTTTACCAACCGA            TATTCTGAC GGT GTCAGATTA            CCAAGTGATGCCTGT  59 157
THICY_RS02685  665925 ..  665939 -  -2.8  -4.60041   ACTTATCCCTAAAAA               GTCTAT TTT ATAGTC               TTGATATTATTTAGC  62 126
THICY_RS02680  662624 ..  662640 -  -2.2  -2.57931   GGTAGTGGTTAGAAT              GAGTCA TTATG TGTCTC              CTCTGCTGTGTTGGA  40 2
THICY_RS02675 NONE
THICY_RS02670  657384 ..  657418 -  -4.9  -3.65351   CCAGTGGTATCCAAA    CCGGT-GGCCCCGCCA CTTT CAGCCAAGCCGACCGG     CAAGCTTTCGCCAAT  57 68
THICY_RS02640 NONE
THICY_RS02635  649425 ..  649454 - -13.5  -4.67982   TGGGACTTAAGAAAA       CCCCGCTCCTTCA ATAA TGAGGGGGCGGGG        TTTCTTCATTGGGTG 100 6
THICY_RS02575  636256 ..  636280 -  -8.6  -3.57144   CGCGCCATCTTCAAA          CCCTAGGTTA TTGAT TAACCTGGGG          TTTATTTTTTTTAAA  74 261
THICY_RS02535 NONE
THICY_RS02530 NONE
THICY_RS02525  625202 ..  625215 -  -3.9    -5.252   CACTGGGACAAAAAA               TTGAT AAAC ATCAA                ACATTAATTGGTGAG  80 269
THICY_RS02475 NONE
THICY_RS02470 NONE
THICY_RS02465  615380 ..  615409 -  -8.6  -3.62096   GGCTATCAGGTGAAA       TCCG-TCCTGTCC CCAGT GGTCAGGAGCGGA       TTATAGAAGCGGCGA  71 146
THICY_RS02370 NONE
THICY_RS02365 NONE
THICY_RS02360 NONE
THICY_RS02355 NONE
THICY_RS02350  597205 ..  597223 -  -4.6  -2.78384   CCCTGTTTGATTATA             GCACAA GGCTAAT TTGTGC             GAATCGTAGCTGCGT  48 44
THICY_RS02345  596762 ..  596790 -  -8.9  -5.69473   TAGAGTATAAAAAAA       CCCGCTGACATC CAGTTT GATGCC-GCGGG        CTTCTCTAGGCGCAG 100 58
THICY_RS02335 NONE
THICY_RS02330  594520 ..  594539 -  -7.9  -4.13767   GTCTTTATGGCAAAA            CCCAAGT TGACCG ACTTGGG             TTTTTTTTTGCTTAG  75 43
THICY_RS02300  587632 ..  587647 - -10.4  -5.67283   AAGGTAAATAAAAAA              GCCAGC GTAT GCTGGC               TTTTAAATATTGGCA 100 56
THICY_RS02290 NONE
THICY_RS02285  585604 ..  585618 - -12.8  -4.57073   GAGTGGCTTTAAAAA               GCGGGC ATT GCCCGC               TTTTTTTATGCCAAC 100 31
THICY_RS02275 NONE
THICY_RS02270 NONE
THICY_RS02265 NONE
THICY_RS02260  581675 ..  581712 -  -7.7  -3.53031   TCTAGCGGAAACGAA   CCAAGCCTGATCGGTAGA CTA CCAACC-AGCAGGCCTGG   TTTTGTGAGATTAGG  68 36
THICY_RS02225  574131 ..  574141 -  -8.2  -2.65409   AATTTAATACAACAG                 GCCG ATG CGGC                 GGGGCGTGCGTCAGA  61 200
THICY_RS02215 NONE
THICY_RS02210 NONE
THICY_RS02205 NONE
THICY_RS02200  570726 ..  570754 -  -8.8  -5.05782   AGTGACGTTAAAAAA        GGATCGCCTGCC CAGTT GGTAGGCGATCG        GTTGAAAGAAAACTA  91 45
THICY_RS02185 NONE
THICY_RS02180  568018 ..  568032 -  -3.5  -2.84634   GTCGAGACCACCAGA              GGC-GC GCAC GCAGCC               CCCAGCTCGAAGTGA  44 0
THICY_RS02175 NONE
THICY_RS02170  564889 ..  564906 -  -5.5  -2.92613   TTTTACTTGAAATGA             CGCGTGA AAAT CCACGCA              ACTCCTCATTTAGTT  53 275
THICY_RS02165  563847 ..  563870 -   -14  -3.32647   TTGTAATTAGATCAA          TAGGGGCAAT AAAA ATTGCCCCTA           TTATAACCTGCAACC 100 86
THICY_RS02160 NONE
THICY_RS02155 NONE
THICY_RS02150  559829 ..  559839 -  -3.2  -2.57564   TGACTGGGTCATAAC                 GAAC CTT GCTC                 AATAAATTTAATAAC  43 82
THICY_RS02145  558596 ..  558611 -  -2.5  -4.13963   ATGTGTCAAAAAACA              GCGCA GGTGAT TGCAC               AGGTTAAGTGCCAGT  57 133
THICY_RS02130 NONE
THICY_RS02125  555343 ..  555357 -  -2.8  -3.87355   TAATGGCAAAAAAAT               CCATAA ATT CCATGG               TCGGGTGCTCTTGTA  53 72
THICY_RS02120 NONE
THICY_RS02115 NONE
THICY_RS02110  552559 ..  552576 -  -6.3  -3.10071   AAAGCTGACTCAAGA             GC-AGGGT CGC ACCCTAGC             GTTTAGTTTTGGCAC  57 323
THICY_RS02100  550632 ..  550651 -  -4.3  -4.00476   GAAAGCTATCATAAA            CCTTAGA GTATAG TCCAAGG             TCAAGGGTTGTTTTA  59 100
THICY_RS02095 NONE
THICY_RS02090  549764 ..  549776 -  -9.1  -2.96989   AATACACACAACAAT                CCCCT GCT AGGGG                TTTTAACAGTGCCCC  69 142
THICY_RS02085  549195 ..  549216 -  -3.7  -3.04398   CTGCCCCGCTAAAAT           TAAACGATC TGCC GCCCGTTTA            GAACAATCCGCGCGT  47 105
THICY_RS02080  548137 ..  548163 -  -7.4  -2.71708   CAAAGTTTATACAAG        TCGTTTGGTGC CGGAAT GCACCAA-CGA         TTTGAAACCGTGTTT  59 76
THICY_RS02065  546643 ..  546662 -    -5  -3.14132   CGCTTGTCGGATGAA            GATCGCAA GTCA TTGCAACC             GGTGGCGGATTAGCA  52 15
THICY_RS02055  544076 ..  544092 -  -7.3  -2.60075   GCCTGTTTAAGCAAC              GCCCAAA TTT TTTAGGC              TACGCCCAAGGCTTG  59 20
THICY_RS02040  540566 ..  540603 - -22.3  -4.08216   GTATTTGCTGGAAAA   CTAGCAGGCCTGCT-ATG AAT CATCAGCAGGCCTGCTAG   TTTACTATTGAGTAT 100 48
THICY_RS02035 NONE
THICY_RS02030 NONE
THICY_RS02025 NONE
        prmA NONE
THICY_RS02015 NONE
THICY_RS02010 NONE
        purH NONE
THICY_RS02000  533016 ..  533043 - -10.6  -2.63596   CCCCAGTTGACATTA        TTGATCGACCAG GAGC CTGGCCGATCAT         TGTGCCTCGTTAATC  76 35
THICY_RS01980 NONE
THICY_RS01975 NONE
THICY_RS01970  525839 ..  525855 -  -3.6  -2.70932   TCCTTTCTGTAATCA              CCAGGC CTGGT GCTTGG              CTTATTGCCGCATGG  45 27
THICY_RS01940  522059 ..  522072 -  -2.5  -3.38522   TATTTACTCCAAACA               TATTT TAGT AAATA                CTAGCAGATCCTTGT  47 76
THICY_RS01935  519414 ..  519429 - -11.8  -3.10905   TCATAACGCACCCAA              CCCCGC ACAC GCGGGG               TTTTTTACATCAAAA  83 63
THICY_RS01925  515833 ..  515845 -  -3.3  -3.40403   TGTGGCTCATTATAA                CCCTT CAA ATGGG                TTAGACCGAGGCCTT  49 7
THICY_RS01920  513945 ..  513962 -  -4.9  -3.85698   GCGCCGCGGTAGAAA             TG-GCCAA GGA TTGGCGCA             CTGATCGTGCTTTGC  59 315
        hslU NONE
THICY_RS01880 NONE
        ubiE NONE
THICY_RS01870 NONE
THICY_RS01865  504259 ..  504281 -   -12  -4.91109   GGTTTAGCAGAAAAA           CCAACCGCAC CTT ATGCGGCTGG           TTATTTAAGCCCTGG 100 49
THICY_RS01840 NONE
THICY_RS01835  496495 ..  496507 -  -4.1  -3.29381   CTAGAATACCATCAA                CAGGA TAT TCCTA                TCTTATGGTTGCCCT  50 352
THICY_RS01820  490291 ..  490311 - -11.9  -5.82316   ACGAGTTAAAAAAAA            GGCCAGCAT TAA ATGCTGACC            TTTTAGCTGGTTACT 100 61
THICY_RS01775 NONE
THICY_RS01770 NONE
THICY_RS01765 NONE
THICY_RS01760  425989 ..  426014 -  -7.6  -6.04324   GTAAAAAATAAAAAA         CCCACCTTTA AGTGGG TAAGGGTGGG          TTTTTTATTGTCTTA 100 60
THICY_RS08575 NONE
THICY_RS01750 NONE
THICY_RS01745 NONE
THICY_RS01740  421924 ..  421939 -  -6.1  -5.40072   TGTGTTTGAAAAAAA              CAGGG TTTAAG CCCTG               TTTTTACTGGCTGAA  85 67
THICY_RS01735 NONE
THICY_RS01730 NONE
        metX NONE
THICY_RS01720  418208 ..  418243 -   -15  -2.63631   CTAATGCCCATAGCA    CCTCCTATAATAAGTA ATTT TGCTTATTATAGGAGG     TTTGATTAAGGATTG 100 31
THICY_RS01715  417416 ..  417437 -  -5.8  -2.99871   TTTTACACTAAATTA           GAAGGCGC TAAATT GCGCTTTC            AAAAATTCTACATTG  56 114
        rpmB NONE
        rpmG  416927 ..  416941 -  -8.5  -5.76633   TTAGATATAAAAAAA               CCGGC GCTAG GCCGG               TTTTTTAAACGAAAA 100 55
THICY_RS01700  415094 ..  415104 -  -3.2  -3.22298   CGCAGTTATTATCAA                 TACG GCC CGCA                 ACGTAATTGGGAGGT  46 356
THICY_RS01680 NONE
THICY_RS01675 NONE
THICY_RS01670 NONE
THICY_RS01665 NONE
THICY_RS01660 NONE
        pyrB NONE
THICY_RS01650 NONE
THICY_RS01645 NONE
THICY_RS01640  404017 ..  404034 -  -4.9  -2.88839   ATTGGTAAAGATAAT             CAAATGC CGTG GCATTTA              CCGGACGATTTAAAA  47 463
THICY_RS01620 NONE
THICY_RS01615 NONE
THICY_RS01610 NONE
THICY_RS01605  397953 ..  397971 -  -2.3  -2.78384   TCGGTTTTTATTACA             TGGCCAA TGCGG CTGGCCG             TTTGGTTGGAACCCT  40 187
THICY_RS01590  395415 ..  395431 -  -2.1  -3.10522   ACGTTAGCTAACATA              CCGGTTG GCT CAGACGG              GAAAAATCGGCGGCG  43 1
THICY_RS01585 NONE
THICY_RS01580  393549 ..  393562 -  -4.5  -2.63596   GGCTATGCCAGACTA               TCAGG ATCG CCCGA                TGTATAGCCAGTTGT  46 118
THICY_RS01560  390060 ..  390070 -  -4.6    -3.767   GATTCAGGCAGTAAA                 CCCA GTT CGGG                 TCGCTTGCATATGCA  57 521
THICY_RS01545 NONE
THICY_RS01540 NONE
THICY_RS01525  382545 ..  382576 -   -13  -3.80018   CCTAGATAGTAATAA      GTAGCCGCAACAAC TATT GCGGTTGCGGCCAC       ACACGACTTTCACCG  95 7
THICY_RS01515 NONE
THICY_RS01510 NONE
THICY_RS01505  379294 ..  379304 -  -4.6  -3.29142   TTTATTAAGAATACA                 GCGA ACC CCGC                 AGGTGCCATATCATC  52 252
THICY_RS01455  282888 ..  282900 -  -3.4  -3.61178   TTTAGGTATGGCAAA                CCAA GCAAA TTGG                CTTGCCGAGCTATTA  51 38
THICY_RS01450  281134 ..  281146 -  -5.5  -3.53444   GCAGGCCTGGTTAAA                CGCCT GGC AAGCG                GGTGGGCATATTTAT  56 184
        pyrE  278950 ..  278979 -  -4.9  -4.19238   CGCGCAACCGCAAAA       CCGCCAAATAGCA GGCC TGCTAATAGGTGG        TGCAGTTATTCTCAT  64 367
THICY_RS01420  275963 ..  275991 -  -3.8  -2.77895   GCGACGTGCAAGAAT        TTGTGCCCGATT GCGTT AATCAGGCACTG        CACGCCAAATTCAAG  45 36
THICY_RS01395  270875 ..  270885 -  -2.4  -3.69938   CGTATAAAATAAAAG                 GTCG CCT CGGC                 GTATATTATTTATAT  48 97
THICY_RS01390  269858 ..  269870 -  -2.7  -4.81685   ACCAAGTACCAAAAA                TCAGT TCA ACTAA                AGCCATGTCCGGTCA  68 376
THICY_RS01325  257528 ..  257544 -  -6.5  -3.58037   GAGGAATGGTCGAAA              TGCAGCG TTT CGGTGCA              CTCTTTGATGCTCAG  61 361
THICY_RS01300  253932 ..  253950 -    -6  -3.14211   AGGCCTGCTGATGAA             GCCGTTTT ACA AAAACGGG             TTCACAGAGAACGGC  57 45
        gltB NONE
THICY_RS01285  246259 ..  246286 - -15.8  -3.29511   TTTATCCGCTGATAA        TAAAAAGGCTCC TTAT GGAGCCTTTTTA         ATTTATACCTCTAGG 100 28
THICY_RS01260 NONE
THICY_RS01255 NONE
THICY_RS01250  239405 ..  239424 -  -6.4  -3.76778   AAAATTGATTAATAA            CCCGAAGCC TTT GGCCT-GGG            TGTTTTTGTTTTGGG  67 67
THICY_RS01245  238770 ..  238789 - -13.6  -5.04601   TTCACAAAGTAAAAA            CCGCCTGT TAAT ACAGGCGG             TTTAGCGGCGATTAA 100 42
THICY_RS01240  238365 ..  238379 -  -8.5  -5.59655   CAAACCAATAAAAAA               GCCCC GAATT GGGGC               TTTTTACTTCACATC 100 55
THICY_RS01175  224400 ..  224417 -  -7.7  -3.03441   TATCAGTGCGCAAGA             GGCATCC GAGA AGATGCC              CTACTGATGTCACGT  64 46
THICY_RS08565  215223 ..  215235 -  -6.3  -2.53015   ACACGCTTTAATTTA                GAATG ACC CATTC                TCTCCTCCTAAAGTG  53 233
THICY_RS01125 NONE
THICY_RS01120  214342 ..  214366 -  -2.1  -2.51815   GTTAATTAGCAATAT         GTTG-GGTGG AATTAA CCGCCACAAC          CACCGATAGTTACGC  39 12
THICY_RS01115  213953 ..  213968 - -11.8  -5.15969   GTCTAAGCTAAAAAA              GCGGGG CAAG CCCCGC               TTTTATCTACAAATT 100 39
THICY_RS01110  212971 ..  213018 -   -13  -4.18018   CGGTTTTATTTAAAA TTAATCCAATAAAAAACCCGGA AACT TCCGGGTTTTTTATTGAGTCAG ATAATATTACTGACG 100 32
THICY_RS01095 NONE
THICY_RS01090  208576 ..  208597 -  -5.9  -2.71011   ATTTTGCGCTAATGA           GCCTAGT TAAGCACG ACTAGGC            TTAGCCAGTTTCCAT  54 10
THICY_RS01075 NONE
THICY_RS01070  204860 ..  204881 -  -5.9  -3.21099   GGTTTTCATGACCAA           CAAGACG CATTATCT CGTCTTG            AAGAGGCTCTAAAGC  55 525
THICY_RS01050  199866 ..  199881 -  -6.2  -3.17212   GGATGATCCCATTAA              CTTTGA CAGT TCAAAG               GTATTGGTTTAAGCC  57 45
        znuC NONE
THICY_RS00985 NONE
THICY_RS00965 NONE
THICY_RS00960 NONE
THICY_RS00955 NONE
THICY_RS00950  179908 ..  179923 -  -2.6  -2.77895   CTTAGTCTGAATAAT              CCTTTCA TGA TGA-AGG              TCCCTGTTTATTGAA  42 14
THICY_RS00945  179393 ..  179409 -  -2.3  -4.06502   CACGTTGAAACCAAA              TTAACTG ATT CATTTAA              GGAACATTCGCCAGT  54 22
THICY_RS00940 NONE
THICY_RS08560  176763 ..  176775 -  -2.7  -4.18488   ATTCAGCCGAAGAAA                TCTTA TTT CAAGA                TTGTCGCTTTTTGCA  59 320
THICY_RS00890 NONE
THICY_RS00885  167207 ..  167243 - -10.4  -2.63073   TGGGTTGAAGAACAT   CGACCAGAT-CT-TGTTG AGG CAACAGAGGATCCGGTCG   TGTCTGAATCTGAAG  69 93
THICY_RS00855  161721 ..  161735 -  -2.8  -2.92613   CGTCACGTTAAATTA               GTGATT ACG ATTCAC               AGCAAGGTCAGCTAA  43 8
THICY_RS00815  151387 ..  151406 -  -4.2  -4.72986   GACGTTGATTAAAAA            CCCAGACA TTAT TGCTTGGG             TTGCACAACAGGTCG  71 350
THICY_RS00795  149069 ..  149082 -  -2.3  -2.64144   TTGGTAGTGAAACAT               CTCGC TCAT GCTAG                GTTCTCGGCTGGTAA  40 22
THICY_RS00790  147703 ..  147735 -  -6.3  -3.59233   CAAGGAGCAAACCAA     CTCC-CCTCGGCGA ATGTTA TCGCCCAAGTGGAG      ATATGGTTGGTCGGC  61 108
THICY_RS00550  112321 ..  112334 -  -2.3  -2.82516   GGCGGCATTATGACA               CTAGC CTGG GCGAG                TGATGCGGTGGATCT  40 177
THICY_RS00500 NONE
THICY_RS00495  103602 ..  103629 -  -2.7  -3.85698   GGTGCCGGTTATAAA        TACGCCTGGCAT GAATA AAGCC-GGCATA        ACCTAGTTTTCCGTC  51 28
THICY_RS00490 NONE
THICY_RS00485  101744 ..  101759 - -11.8  -4.62471   CCTAACGGCTAAAAA              CCCCGC CCCG GCGGGG               TTTTTTAATCCCCAA 100 115
THICY_RS00475   99943 ..   99955 -  -2.7  -4.08945   ATGACGTTTTGAAAA                TTGAC CAG ATCAA                AAAAATCCATGCGCG  56 434
THICY_RS00420   85094 ..   85112 -  -8.9  -2.83403   GCCGTTTGATTAAAG             CCCTAGT GTTTT ACTAGGG             AATTAAAAGACTCTA  68 38
THICY_RS00415   84342 ..   84376 - -11.5  -4.19746   CCTAGCCTAAAAGAA     TCAGGCTGACTCAAA AGAAA TCTGAGCCGGCCTGA     TTACAACAAGTGAAA  90 48
         gmk NONE
THICY_RS00385 NONE
THICY_RS00380 NONE
THICY_RS00375 NONE
THICY_RS00370   76080 ..   76094 -  -3.6  -3.85704   TTACCAAGCACCAAA               TCAAAA CCG CTTTGA               AACTGGTGGTTTATG  55 206
THICY_RS00300   61985 ..   61997 -  -3.3  -3.38056   ATGTTGAAAAAACTA                CCTTG GCG CGAGG                ACTGCGTTTTCATCT  48 99
THICY_RS00290   60262 ..   60276 -  -4.2  -3.34895   TTTATCCTTAATTAA               GGTCAA ATT CCGACC               ATACGGGGGCATGAT  52 3
THICY_RS00285   59336 ..   59348 -  -2.6  -3.52204   TTACCGCCAAATTAA                CCCA TGCGC CGGG                TAACGATGCCGCGAT  49 238
THICY_RS00255 NONE
        aroE   49686 ..   49697 -  -4.4  -3.62096   GCGCACTATGTCAAA                CTCA AAAA TGAG                 TTTGCTGCTGAATCA  55 15
THICY_RS00235 NONE
THICY_RS00230 NONE
THICY_RS00225 NONE
THICY_RS00220 NONE
THICY_RS00215   42503 ..   42517 -  -2.8  -2.64218   ATCTTCGATTAGAAG               CAACAT TAT ATGATG               AGTGTTTGGTTTGCG  41 220
THICY_RS00210 NONE
THICY_RS00205 NONE
THICY_RS00200   40799 ..   40824 -  -3.2  -2.60776   AAGCGTGCAAAAAGG         GTGAGAGTGG CGAGGT CTGCTCTCAC          AGGATTAGAAATTCT  43 30
THICY_RS00195 NONE
THICY_RS00190   35165 ..   35176 -    -3  -3.89524   ATGCTACTCCATAAA                CTAT TTTT ATAG                 TATTTTGCCTCAATG  53 88
THICY_RS00185 NONE
THICY_RS00180   34155 ..   34184 -  -2.1  -2.93975   ATGTTGCAAAAACAG       TGACCTAGCTAAC GTGA ATTAACCAGGCCT        GCTTATTGTTGAAGC  42 51
THICY_RS00175 NONE
THICY_RS00170   31291 ..   31303 -  -3.3  -4.23104   TTAAATTTTAATAAA                GAGCT TTT AGCGC                AAATTATCTGTTGCG  60 19
THICY_RS00165 NONE
THICY_RS00160 NONE
THICY_RS00155   29401 ..   29411 -  -3.2  -4.68593   GTGAGCATGGAAAAA                 CTCG CTA CGAA                 GGTATTAGAGTTAGG  69 103
THICY_RS00145   27373 ..   27389 -  -7.9  -3.18118   GTATTTTATAACAGA              CCGTTCG TTG CGAGCGG              CGGATTAGCGACTTG  65 30
THICY_RS00120   22463 ..   22489 - -13.1  -5.60689   CTAGATAACAAAAAA         CGGGAAGTCTT AAGAA AAGACTCCCCG         TTTTACTTTCAGGTA 100 62
THICY_RS00115 NONE
THICY_RS00110   19102 ..   19119 -  -2.8   -4.1196   AACGTACTGCGAAAA             TTTTAG CCGAAC CTAAAA              TGGCCGCTACCTGGA  56 230
THICY_RS00080   13212 ..   13222 -  -6.8  -2.76696   TGCGTTTCGAATAAG                 GCTG AAT CAGC                 ATTATTCAGAATTTG  57 43
THICY_RS00075   13086 ..   13101 -  -6.1  -5.58454   TGCAGATGAAAAAAA              CCCTC AATTAA GAGGG               TTTATTGTAATGTGC  89 38
THICY_RS00070 NONE
THICY_RS00065 NONE
        purT   10325 ..   10342 -  -2.7  -3.54424   CTCTATTCGGTTAAA             CATTATC ACTT GATTATG              ATGGGTTTAAAAATG  47 32
THICY_RS00055    9633 ..    9654 -  -6.5  -3.92373   GATGTTAGTGATAAA           GCGCAAACC GAAC GGATTGCAC            GGGCACAAGCCCGGA  66 482
