TK90_RS00005	SM00382	ATPases associated with a variety of cellular activities
TK90_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
TK90_RS00010	SM00480	DNA polymerase III beta subunit
TK90_RS00020	SM00387	Histidine kinase-like ATPases
TK90_RS00020	SM00433	TopoisomeraseII
TK90_RS00065	SM00448	cheY-homologous receiver domain
TK90_RS00065	SM00850	LytTr DNA-binding domain
TK90_RS00125	SM00347	helix_turn_helix multiple antibiotic resistance protein
TK90_RS00165	SM00267	diguanylate cyclase
TK90_RS00215	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
TK90_RS00215	SM00474	3'-5' exonuclease
TK90_RS00215	SM00475	5'-3' exonuclease
TK90_RS00215	SM00482	DNA polymerase A domain
TK90_RS00240	SM00387	Histidine kinase-like ATPases
TK90_RS00240	SM00388	His Kinase A (phosphoacceptor) domain
TK90_RS00245	SM00382	ATPases associated with a variety of cellular activities
TK90_RS00245	SM00448	cheY-homologous receiver domain
TK90_RS00290	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
TK90_RS00300	SM00116	Domain in cystathionine beta-synthase and other proteins.
TK90_RS00350	SM00257	Lysin motif
TK90_RS00355	SM00331	Sigma factor PP2C-like phosphatases
TK90_RS00355	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
TK90_RS00390	SM00849	Metallo-beta-lactamase superfamily
TK90_RS00475	SM00861	Transketolase, pyrimidine binding domain
TK90_RS00490	SM00267	diguanylate cyclase
TK90_RS00490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TK90_RS00550	SM00382	ATPases associated with a variety of cellular activities
TK90_RS00550	SM01086	C-terminal, D2-small domain, of ClpB protein
TK90_RS00645	SM00220	Serine/Threonine protein kinases, catalytic domain
TK90_RS00645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TK90_RS00650	SM00240	Forkhead associated domain
TK90_RS00660	SM00267	diguanylate cyclase
TK90_RS00685	SM00729	Elongator protein 3, MiaB family, Radical SAM
TK90_RS00690	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
TK90_RS00715	SM00382	ATPases associated with a variety of cellular activities
TK90_RS00740	SM01207	TK90_RS00740
TK90_RS00805	SM00382	ATPases associated with a variety of cellular activities
TK90_RS00810	SM00382	ATPases associated with a variety of cellular activities
TK90_RS00810	SM00962	SRP54-type protein, GTPase domain
TK90_RS00810	SM00963	SRP54-type protein, helical bundle domain
TK90_RS00845	SM01209	TK90_RS00845
TK90_RS00845	SM01210	TK90_RS00845
TK90_RS00850	SM00798	AICARFT/IMPCHase bienzyme
TK90_RS00850	SM00851	MGS-like domain
TK90_RS00870	SM01018	B12 binding domain
TK90_RS00925	SM00905	Dihydroneopterin aldolase
TK90_RS00935	SM00938	Nitrogen regulatory protein P-II
TK90_RS00945	SM00382	ATPases associated with a variety of cellular activities
TK90_RS01075	SM00530	Helix-turn-helix XRE-family like proteins 
TK90_RS01165	SM00448	cheY-homologous receiver domain
TK90_RS01165	SM00862	Transcriptional regulatory protein, C terminal
TK90_RS01170	SM00387	Histidine kinase-like ATPases
TK90_RS01180	SM00382	ATPases associated with a variety of cellular activities
TK90_RS01180	SM00487	DEAD-like helicases superfamily
TK90_RS01180	SM00490	helicase superfamily c-terminal domain
TK90_RS01180	SM00847	Helicase associated domain (HA2)  Add an annotation
TK90_RS01190	SM00836	DALR anticodon binding domain
TK90_RS01190	SM01016	Arginyl tRNA synthetase N terminal dom
TK90_RS01195	SM00487	DEAD-like helicases superfamily
TK90_RS01195	SM00490	helicase superfamily c-terminal domain
TK90_RS01210	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
TK90_RS01210	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
TK90_RS01215	SM00507	HNH nucleases
TK90_RS01225	SM00852	Probable molybdopterin binding domain
TK90_RS01230	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
TK90_RS01235	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
TK90_RS01235	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
TK90_RS01275	SM00400	zinc finger
TK90_RS01275	SM00493	TK90_RS01275
TK90_RS01275	SM00766	DNA primase DnaG DnaB-binding
TK90_RS01290	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TK90_RS01350	SM00965	Secretin and TonB N terminus short domain
TK90_RS01410	SM00883	Chaperonin 10 Kd subunit
TK90_RS01440	SM00382	ATPases associated with a variety of cellular activities
TK90_RS01505	SM00382	ATPases associated with a variety of cellular activities
TK90_RS01580	SM00474	3'-5' exonuclease
TK90_RS01615	SM00845	GatB domain
TK90_RS01650	SM00937	TK90_RS01650
TK90_RS01660	SM00028	Tetratricopeptide repeats
TK90_RS01680	SM01400	TK90_RS01680
TK90_RS01705	SM00479	TK90_RS01705
TK90_RS01735	SM00091	PAS domain
TK90_RS01735	SM00267	diguanylate cyclase
TK90_RS01760	SM00464	Found in ATP-dependent protease La (LON)
TK90_RS01800	SM00382	ATPases associated with a variety of cellular activities
TK90_RS01885	SM00382	ATPases associated with a variety of cellular activities
TK90_RS01940	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TK90_RS01955	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TK90_RS01980	SM00363	S4 RNA-binding domain
TK90_RS02020	SM00849	Metallo-beta-lactamase superfamily
TK90_RS02030	SM01130	TK90_RS02030
TK90_RS02045	SM00670	Large family of predicted nucleotide-binding domains
TK90_RS02055	SM00861	Transketolase, pyrimidine binding domain
TK90_RS02095	SM00382	ATPases associated with a variety of cellular activities
TK90_RS02100	SM01091	Transporter associated domain
TK90_RS02110	SM00382	ATPases associated with a variety of cellular activities
TK90_RS02110	SM00962	SRP54-type protein, GTPase domain
TK90_RS02110	SM00963	SRP54-type protein, helical bundle domain
TK90_RS02155	SM00387	Histidine kinase-like ATPases
TK90_RS02220	SM00671	Sel1-like repeats.
TK90_RS02280	SM00271	DnaJ molecular chaperone homology domain
TK90_RS02285	SM00052	Putative diguanylate phosphodiesterase
TK90_RS02285	SM00267	diguanylate cyclase
TK90_RS02300	SM00841	Elongation factor P, C-terminal
TK90_RS02300	SM01185	TK90_RS02300
TK90_RS02335	SM00822	TK90_RS02335
TK90_RS02350	SM00825	Beta-ketoacyl synthase
TK90_RS02410	SM00271	DnaJ molecular chaperone homology domain
TK90_RS02420	SM00052	Putative diguanylate phosphodiesterase
TK90_RS02420	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS02420	SM00091	PAS domain
TK90_RS02420	SM00267	diguanylate cyclase
TK90_RS02440	SM00257	Lysin motif
TK90_RS02440	SM00646	TK90_RS02440
TK90_RS02445	SM00853	MutL C terminal dimerisation domain
TK90_RS02445	SM01340	TK90_RS02445
TK90_RS02465	SM00257	Lysin motif
TK90_RS02480	SM00479	TK90_RS02480
TK90_RS02535	SM00834	Putative regulatory protein
TK90_RS02560	SM00052	Putative diguanylate phosphodiesterase
TK90_RS02560	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS02560	SM00091	PAS domain
TK90_RS02560	SM00267	diguanylate cyclase
TK90_RS02575	SM00831	Cation transporter/ATPase, N-terminus
TK90_RS02580	SM00052	Putative diguanylate phosphodiesterase
TK90_RS02580	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TK90_RS02580	SM00267	diguanylate cyclase
TK90_RS02620	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS02620	SM00091	PAS domain
TK90_RS02620	SM00267	diguanylate cyclase
TK90_RS02625	SM00052	Putative diguanylate phosphodiesterase
TK90_RS02625	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TK90_RS02625	SM00267	diguanylate cyclase
TK90_RS02630	SM00155	Phospholipase D. Active site motifs.
TK90_RS02635	SM00434	DNA Topoisomerase IV
TK90_RS02640	SM00052	Putative diguanylate phosphodiesterase
TK90_RS02640	SM00267	diguanylate cyclase
TK90_RS02640	SM00448	cheY-homologous receiver domain
TK90_RS02645	SM00091	PAS domain
TK90_RS02645	SM00387	Histidine kinase-like ATPases
TK90_RS02645	SM00388	His Kinase A (phosphoacceptor) domain
TK90_RS02645	SM00448	cheY-homologous receiver domain
TK90_RS02655	SM00849	Metallo-beta-lactamase superfamily
TK90_RS02660	SM00387	Histidine kinase-like ATPases
TK90_RS02660	SM00388	His Kinase A (phosphoacceptor) domain
TK90_RS02665	SM00382	ATPases associated with a variety of cellular activities
TK90_RS02665	SM00448	cheY-homologous receiver domain
TK90_RS02695	SM00849	Metallo-beta-lactamase superfamily
TK90_RS02705	SM00450	Rhodanese Homology Domain
TK90_RS02780	SM00382	ATPases associated with a variety of cellular activities
TK90_RS02855	SM00382	ATPases associated with a variety of cellular activities
TK90_RS02855	SM00994	ClpX C4-type zinc finger
TK90_RS02855	SM01086	C-terminal, D2-small domain, of ClpB protein
TK90_RS02860	SM00382	ATPases associated with a variety of cellular activities
TK90_RS02860	SM00464	Found in ATP-dependent protease La (LON)
TK90_RS02865	SM00411	bacterial (prokaryotic) histone like domain
TK90_RS02895	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TK90_RS03005	SM00382	ATPases associated with a variety of cellular activities
TK90_RS03015	SM00267	diguanylate cyclase
TK90_RS03070	SM00984	UDP binding domain
TK90_RS03100	SM00382	ATPases associated with a variety of cellular activities
TK90_RS03115	SM00226	Low molecular weight phosphatase family
TK90_RS03165	SM00450	Rhodanese Homology Domain
TK90_RS03220	SM00729	Elongator protein 3, MiaB family, Radical SAM
TK90_RS03235	SM00729	Elongator protein 3, MiaB family, Radical SAM
TK90_RS03275	SM00327	von Willebrand factor (vWF) type A domain
TK90_RS03295	SM00382	ATPases associated with a variety of cellular activities
TK90_RS03305	SM00382	ATPases associated with a variety of cellular activities
TK90_RS03335	SM01012	TK90_RS03335
TK90_RS03350	SM00382	ATPases associated with a variety of cellular activities
TK90_RS03365	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
TK90_RS03395	SM00840	TK90_RS03395
TK90_RS03405	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS03405	SM00091	PAS domain
TK90_RS03405	SM00387	Histidine kinase-like ATPases
TK90_RS03405	SM00388	His Kinase A (phosphoacceptor) domain
TK90_RS03410	SM00448	cheY-homologous receiver domain
TK90_RS03415	SM00052	Putative diguanylate phosphodiesterase
TK90_RS03415	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TK90_RS03415	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS03415	SM00091	PAS domain
TK90_RS03415	SM00267	diguanylate cyclase
TK90_RS03415	SM00448	cheY-homologous receiver domain
TK90_RS03440	SM00450	Rhodanese Homology Domain
TK90_RS03455	SM00981	TK90_RS03455
TK90_RS03465	SM00382	ATPases associated with a variety of cellular activities
TK90_RS03490	SM00062	Bacterial periplasmic substrate-binding proteins
TK90_RS03510	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
TK90_RS03515	SM00851	MGS-like domain
TK90_RS03515	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
TK90_RS03525	SM01103	TK90_RS03525
TK90_RS03535	SM00382	ATPases associated with a variety of cellular activities
TK90_RS03590	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
TK90_RS03595	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
TK90_RS03650	SM00316	Ribosomal protein S1-like RNA-binding domain
TK90_RS03650	SM00322	K homology RNA-binding domain
TK90_RS03670	SM01387	TK90_RS03670
TK90_RS03675	SM00316	Ribosomal protein S1-like RNA-binding domain
TK90_RS03675	SM00322	K homology RNA-binding domain
TK90_RS03685	SM00562	TK90_RS03685
TK90_RS03695	SM00028	Tetratricopeptide repeats
TK90_RS03715	SM00564	beta-propeller repeat
TK90_RS03720	SM00382	ATPases associated with a variety of cellular activities
TK90_RS03765	SM00287	Bacterial SH3 domain homologues
TK90_RS03810	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TK90_RS03810	SM00450	Rhodanese Homology Domain
TK90_RS03815	SM00849	Metallo-beta-lactamase superfamily
TK90_RS03830	SM00100	Cyclic nucleotide-monophosphate binding domain
TK90_RS03855	SM00867	YceI-like domain 
TK90_RS03895	SM00028	Tetratricopeptide repeats
TK90_RS03945	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
TK90_RS03945	SM00534	ATPase domain of DNA mismatch repair MUTS family
TK90_RS03960	SM00100	Cyclic nucleotide-monophosphate binding domain
TK90_RS03960	SM00419	helix_turn_helix, cAMP Regulatory protein
TK90_RS04020	SM00382	ATPases associated with a variety of cellular activities
TK90_RS04140	SM00422	helix_turn_helix, mercury resistance
TK90_RS04195	SM00271	DnaJ molecular chaperone homology domain
TK90_RS04215	SM00382	ATPases associated with a variety of cellular activities
TK90_RS04220	SM00267	diguanylate cyclase
TK90_RS04225	SM00341	Helicase and RNase D C-terminal
TK90_RS04225	SM00487	DEAD-like helicases superfamily
TK90_RS04225	SM00490	helicase superfamily c-terminal domain
TK90_RS04225	SM00956	TK90_RS04225
TK90_RS04265	SM00382	ATPases associated with a variety of cellular activities
TK90_RS04265	SM00448	cheY-homologous receiver domain
TK90_RS04270	SM00387	Histidine kinase-like ATPases
TK90_RS04270	SM00388	His Kinase A (phosphoacceptor) domain
TK90_RS04315	SM00961	Ribulose bisphosphate carboxylase, small chain
TK90_RS04340	SM00877	TK90_RS04340
TK90_RS04345	SM00877	TK90_RS04345
TK90_RS04350	SM00877	TK90_RS04350
TK90_RS04380	SM00327	von Willebrand factor (vWF) type A domain
TK90_RS04400	SM00587	ZnF_C4 abd HLH domain containing kinases domain
TK90_RS04405	SM00382	ATPases associated with a variety of cellular activities
TK90_RS04410	SM00938	Nitrogen regulatory protein P-II
TK90_RS04435	SM00831	Cation transporter/ATPase, N-terminus
TK90_RS04465	SM01219	TK90_RS04465
TK90_RS04550	SM00155	Phospholipase D. Active site motifs.
TK90_RS04575	SM00849	Metallo-beta-lactamase superfamily
TK90_RS04580	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TK90_RS04605	SM00873	B3/4 domain
TK90_RS04605	SM00874	tRNA synthetase B5 domain
TK90_RS04605	SM00896	Ferredoxin-fold anticodon binding domain
TK90_RS04610	SM00411	bacterial (prokaryotic) histone like domain
TK90_RS04615	SM00422	helix_turn_helix, mercury resistance
TK90_RS04640	SM00858	TK90_RS04640
TK90_RS04645	SM00260	Two component signalling adaptor domain
TK90_RS04645	SM00448	cheY-homologous receiver domain
TK90_RS04650	SM00138	Methyltransferase, chemotaxis proteins 
TK90_RS04695	SM00047	Lysozyme subfamily 2
TK90_RS04735	SM00855	Phosphoglycerate mutase family
TK90_RS04770	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TK90_RS04770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TK90_RS04795	SM00382	ATPases associated with a variety of cellular activities
TK90_RS04815	SM00091	PAS domain
TK90_RS04815	SM00387	Histidine kinase-like ATPases
TK90_RS04815	SM00388	His Kinase A (phosphoacceptor) domain
TK90_RS04820	SM00448	cheY-homologous receiver domain
TK90_RS04820	SM00862	Transcriptional regulatory protein, C terminal
TK90_RS04825	SM00849	Metallo-beta-lactamase superfamily
TK90_RS04835	SM01116	TK90_RS04835
TK90_RS04840	SM00382	ATPases associated with a variety of cellular activities
TK90_RS04855	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TK90_RS04855	SM00382	ATPases associated with a variety of cellular activities
TK90_RS04870	SM00382	ATPases associated with a variety of cellular activities
TK90_RS04935	SM00937	TK90_RS04935
TK90_RS04960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TK90_RS04960	SM00387	Histidine kinase-like ATPases
TK90_RS04960	SM00388	His Kinase A (phosphoacceptor) domain
TK90_RS04965	SM00382	ATPases associated with a variety of cellular activities
TK90_RS04965	SM00448	cheY-homologous receiver domain
TK90_RS05005	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TK90_RS05005	SM00267	diguanylate cyclase
TK90_RS05110	SM00382	ATPases associated with a variety of cellular activities
TK90_RS05145	SM00891	ERCC4 domain
TK90_RS05155	SM00052	Putative diguanylate phosphodiesterase
TK90_RS05155	SM00091	PAS domain
TK90_RS05155	SM00267	diguanylate cyclase
TK90_RS05160	SM00052	Putative diguanylate phosphodiesterase
TK90_RS05160	SM00091	PAS domain
TK90_RS05160	SM00267	diguanylate cyclase
TK90_RS05165	SM00487	DEAD-like helicases superfamily
TK90_RS05165	SM00490	helicase superfamily c-terminal domain
TK90_RS05170	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TK90_RS05170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TK90_RS05190	SM00849	Metallo-beta-lactamase superfamily
TK90_RS05200	SM00450	Rhodanese Homology Domain
TK90_RS05210	SM00460	Transglutaminase/protease-like homologues
TK90_RS05225	SM00450	Rhodanese Homology Domain
TK90_RS05240	SM00849	Metallo-beta-lactamase superfamily
TK90_RS05255	SM00487	DEAD-like helicases superfamily
TK90_RS05255	SM00490	helicase superfamily c-terminal domain
TK90_RS05280	SM00954	Region found in RelA / SpoT proteins
TK90_RS05300	SM01152	TK90_RS05300
TK90_RS05315	SM00506	Appr-1"-p processing enzyme
TK90_RS05320	SM00729	Elongator protein 3, MiaB family, Radical SAM
TK90_RS05355	SM00382	ATPases associated with a variety of cellular activities
TK90_RS05405	SM00091	PAS domain
TK90_RS05405	SM00267	diguanylate cyclase
TK90_RS05405	SM01079	TK90_RS05405
TK90_RS05425	SM00382	ATPases associated with a variety of cellular activities
TK90_RS05445	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TK90_RS05480	SM00116	Domain in cystathionine beta-synthase and other proteins.
TK90_RS05485	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS05485	SM00091	PAS domain
TK90_RS05485	SM00267	diguanylate cyclase
TK90_RS05505	SM00481	DNA polymerase alpha chain like domain
TK90_RS05525	SM00052	Putative diguanylate phosphodiesterase
TK90_RS05560	SM00530	Helix-turn-helix XRE-family like proteins 
TK90_RS05575	SM00530	Helix-turn-helix XRE-family like proteins 
TK90_RS05620	SM00267	diguanylate cyclase
TK90_RS05625	SM00382	ATPases associated with a variety of cellular activities
TK90_RS05760	SM00155	Phospholipase D. Active site motifs.
TK90_RS05795	SM01211	TK90_RS05795
TK90_RS05805	SM00382	ATPases associated with a variety of cellular activities
TK90_RS05810	SM00382	ATPases associated with a variety of cellular activities
TK90_RS05835	SM00382	ATPases associated with a variety of cellular activities
TK90_RS05895	SM00382	ATPases associated with a variety of cellular activities
TK90_RS05895	SM00962	SRP54-type protein, GTPase domain
TK90_RS05910	SM00448	cheY-homologous receiver domain
TK90_RS05920	SM00073	Histidine Phosphotransfer domain
TK90_RS05920	SM00260	Two component signalling adaptor domain
TK90_RS05920	SM00387	Histidine kinase-like ATPases
TK90_RS05920	SM01231	TK90_RS05920
TK90_RS05925	SM00448	cheY-homologous receiver domain
TK90_RS05945	SM00260	Two component signalling adaptor domain
TK90_RS05950	SM00260	Two component signalling adaptor domain
TK90_RS05975	SM00226	Low molecular weight phosphatase family
TK90_RS05980	SM00316	Ribosomal protein S1-like RNA-binding domain
TK90_RS05985	SM00363	S4 RNA-binding domain
TK90_RS06005	SM00487	DEAD-like helicases superfamily
TK90_RS06005	SM00490	helicase superfamily c-terminal domain
TK90_RS06005	SM00982	TK90_RS06005
TK90_RS06005	SM01058	CarD-like/TRCF domain
TK90_RS06030	SM00382	ATPases associated with a variety of cellular activities
TK90_RS06040	SM00849	Metallo-beta-lactamase superfamily
TK90_RS06050	SM00434	DNA Topoisomerase IV
TK90_RS06065	SM00830	Chorismate mutase type II
TK90_RS06090	SM00316	Ribosomal protein S1-like RNA-binding domain
TK90_RS06095	SM00411	bacterial (prokaryotic) histone like domain
TK90_RS06110	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
TK90_RS06115	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TK90_RS06125	SM01160	TK90_RS06125
TK90_RS06135	SM00992	Hemimethylated DNA-binding protein YccV like
TK90_RS06145	SM01007	Class II Aldolase and Adducin N-terminal domain
TK90_RS06250	SM00487	DEAD-like helicases superfamily
TK90_RS06250	SM00490	helicase superfamily c-terminal domain
TK90_RS06285	SM00421	helix_turn_helix, Lux Regulon
TK90_RS06330	SM00825	Beta-ketoacyl synthase
TK90_RS06340	SM00822	TK90_RS06340
TK90_RS06345	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
TK90_RS06350	SM00316	Ribosomal protein S1-like RNA-binding domain
TK90_RS06355	SM00382	ATPases associated with a variety of cellular activities
TK90_RS06355	SM01086	C-terminal, D2-small domain, of ClpB protein
TK90_RS06365	SM01329	TK90_RS06365
TK90_RS06395	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TK90_RS06400	SM00052	Putative diguanylate phosphodiesterase
TK90_RS06400	SM00267	diguanylate cyclase
TK90_RS06415	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
TK90_RS06435	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
TK90_RS06475	SM00257	Lysin motif
TK90_RS06495	SM00463	Small MutS-related domain
TK90_RS06510	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS06510	SM00091	PAS domain
TK90_RS06525	SM00487	DEAD-like helicases superfamily
TK90_RS06525	SM00491	TK90_RS06525
TK90_RS06570	SM01323	TK90_RS06570
TK90_RS06605	SM00052	Putative diguanylate phosphodiesterase
TK90_RS06605	SM00267	diguanylate cyclase
TK90_RS06605	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TK90_RS06630	SM00421	helix_turn_helix, Lux Regulon
TK90_RS06640	SM00382	ATPases associated with a variety of cellular activities
TK90_RS06665	SM00382	ATPases associated with a variety of cellular activities
TK90_RS06675	SM00382	ATPases associated with a variety of cellular activities
TK90_RS06685	SM00460	Transglutaminase/protease-like homologues
TK90_RS06760	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TK90_RS06765	SM01329	TK90_RS06765
TK90_RS06795	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
TK90_RS06825	SM00382	ATPases associated with a variety of cellular activities
TK90_RS06840	SM00267	diguanylate cyclase
TK90_RS06875	SM01117	TK90_RS06875
TK90_RS06880	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TK90_RS06920	SM00267	diguanylate cyclase
TK90_RS06920	SM00448	cheY-homologous receiver domain
TK90_RS06945	SM00382	ATPases associated with a variety of cellular activities
TK90_RS06950	SM00829	Enoylreductase
TK90_RS06955	SM00450	Rhodanese Homology Domain
TK90_RS06955	SM00981	TK90_RS06955
TK90_RS06990	SM00267	diguanylate cyclase
TK90_RS07005	SM00100	Cyclic nucleotide-monophosphate binding domain
TK90_RS07005	SM00419	helix_turn_helix, cAMP Regulatory protein
TK90_RS07060	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS07060	SM00091	PAS domain
TK90_RS07060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TK90_RS07065	SM00052	Putative diguanylate phosphodiesterase
TK90_RS07100	SM00404	Protein tyrosine phosphatase, catalytic domain motif
TK90_RS07170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TK90_RS07170	SM00091	PAS domain
TK90_RS07170	SM00267	diguanylate cyclase
TK90_RS07175	SM00267	diguanylate cyclase
TK90_RS07190	SM00014	Acid phosphatase homologues
TK90_RS07225	SM01321	TK90_RS07225
TK90_RS07300	SM00855	Phosphoglycerate mutase family
TK90_RS07345	SM00382	ATPases associated with a variety of cellular activities
TK90_RS07385	SM01192	TK90_RS07385
TK90_RS07385	SM01193	TK90_RS07385
TK90_RS07400	SM00331	Sigma factor PP2C-like phosphatases
TK90_RS07405	SM00267	diguanylate cyclase
TK90_RS07420	SM00062	Bacterial periplasmic substrate-binding proteins
TK90_RS07425	SM00977	TilS substrate C-terminal domain
TK90_RS07435	SM00481	DNA polymerase alpha chain like domain
TK90_RS07475	SM00935	Outer membrane protein (OmpH-like)
TK90_RS07485	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TK90_RS07530	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TK90_RS07555	SM00052	Putative diguanylate phosphodiesterase
TK90_RS07555	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS07555	SM00091	PAS domain
TK90_RS07555	SM00267	diguanylate cyclase
TK90_RS07555	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TK90_RS07590	SM00729	Elongator protein 3, MiaB family, Radical SAM
TK90_RS07610	SM00729	Elongator protein 3, MiaB family, Radical SAM
TK90_RS07625	SM00704	CDGSH-type zinc finger. Function unknown.
TK90_RS07705	SM00642	Alpha-amylase domain
TK90_RS07735	SM00966	SpoVT / AbrB like domain 
TK90_RS07765	SM00530	Helix-turn-helix XRE-family like proteins 
TK90_RS07810	SM00984	UDP binding domain
TK90_RS07820	SM01321	TK90_RS07820
TK90_RS07830	SM01321	TK90_RS07830
TK90_RS07840	SM01321	TK90_RS07840
TK90_RS07850	SM01321	TK90_RS07850
TK90_RS07890	SM00966	SpoVT / AbrB like domain 
TK90_RS07910	SM00984	UDP binding domain
TK90_RS07920	SM01321	TK90_RS07920
TK90_RS07925	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TK90_RS07925	SM00292	breast cancer carboxy-terminal domain
TK90_RS07925	SM00532	Ligase N family
TK90_RS07930	SM00771	ZipA, C-terminal domain (FtsZ-binding)
TK90_RS07960	SM00062	Bacterial periplasmic substrate-binding proteins
TK90_RS07970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TK90_RS07970	SM00331	Sigma factor PP2C-like phosphatases
TK90_RS08005	SM00387	Histidine kinase-like ATPases
TK90_RS08010	SM00052	Putative diguanylate phosphodiesterase
TK90_RS08010	SM00091	PAS domain
TK90_RS08010	SM00267	diguanylate cyclase
TK90_RS08010	SM00448	cheY-homologous receiver domain
TK90_RS08015	SM00052	Putative diguanylate phosphodiesterase
TK90_RS08015	SM00062	Bacterial periplasmic substrate-binding proteins
TK90_RS08015	SM00091	PAS domain
TK90_RS08015	SM00267	diguanylate cyclase
TK90_RS08045	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TK90_RS08045	SM00465	GIY-YIG type nucleases (URI domain)
TK90_RS08050	SM00986	Uracil DNA glycosylase superfamily
TK90_RS08050	SM00987	UreE urease accessory protein, C-terminal domain 
TK90_RS08055	SM01118	TK90_RS08055
TK90_RS08080	SM00878	Biotin carboxylase C-terminal domain
TK90_RS08095	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TK90_RS08100	SM00248	ankyrin repeats
TK90_RS08130	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TK90_RS08140	SM00382	ATPases associated with a variety of cellular activities
TK90_RS08155	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
TK90_RS08155	SM00534	ATPase domain of DNA mismatch repair MUTS family
TK90_RS08205	SM00382	ATPases associated with a variety of cellular activities
TK90_RS08220	SM00530	Helix-turn-helix XRE-family like proteins 
TK90_RS08240	SM00487	DEAD-like helicases superfamily
TK90_RS08270	SM00342	helix_turn_helix, arabinose operon control protein
TK90_RS08290	SM00450	Rhodanese Homology Domain
TK90_RS08335	SM00450	Rhodanese Homology Domain
TK90_RS08335	SM00849	Metallo-beta-lactamase superfamily
TK90_RS08350	SM00877	TK90_RS08350
TK90_RS08370	SM00267	diguanylate cyclase
TK90_RS08390	SM00052	Putative diguanylate phosphodiesterase
TK90_RS08390	SM00267	diguanylate cyclase
TK90_RS08395	SM00507	HNH nucleases
TK90_RS08480	SM01321	TK90_RS08480
TK90_RS08500	SM00382	ATPases associated with a variety of cellular activities
TK90_RS08505	SM00116	Domain in cystathionine beta-synthase and other proteins.
TK90_RS08505	SM00924	MgtE intracellular N domain
TK90_RS08510	SM00116	Domain in cystathionine beta-synthase and other proteins.
TK90_RS08510	SM00924	MgtE intracellular N domain
TK90_RS08535	SM00917	LeuA allosteric (dimerisation) domain
TK90_RS08550	SM01321	TK90_RS08550
TK90_RS08585	SM00917	LeuA allosteric (dimerisation) domain
TK90_RS08590	SM00344	helix_turn_helix ASNC type
TK90_RS08600	SM00382	ATPases associated with a variety of cellular activities
TK90_RS08610	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS08610	SM00267	diguanylate cyclase
TK90_RS08615	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS08615	SM00091	PAS domain
TK90_RS08620	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS08620	SM00091	PAS domain
TK90_RS08620	SM00267	diguanylate cyclase
TK90_RS08720	SM00478	endonuclease III
TK90_RS08720	SM00525	TK90_RS08720
TK90_RS08755	SM00450	Rhodanese Homology Domain
TK90_RS08765	SM00450	Rhodanese Homology Domain
TK90_RS08795	SM00062	Bacterial periplasmic substrate-binding proteins
TK90_RS08795	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TK90_RS08795	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS08795	SM00091	PAS domain
TK90_RS08795	SM00267	diguanylate cyclase
TK90_RS08805	SM00478	endonuclease III
TK90_RS08810	SM00363	S4 RNA-binding domain
TK90_RS08815	SM00852	Probable molybdopterin binding domain
TK90_RS08850	SM00887	Ethylbenzene dehydrogenase
TK90_RS08920	SM00671	Sel1-like repeats.
TK90_RS08930	SM00986	Uracil DNA glycosylase superfamily
TK90_RS08930	SM00987	UreE urease accessory protein, C-terminal domain 
TK90_RS08985	SM01007	Class II Aldolase and Adducin N-terminal domain
TK90_RS09015	SM00900	TK90_RS09015
TK90_RS09100	SM01321	TK90_RS09100
TK90_RS09140	SM01011	Aminopeptidase P, N-terminal domain
TK90_RS09170	SM00843	TK90_RS09170
TK90_RS09270	SM00479	TK90_RS09270
TK90_RS09300	SM00493	TK90_RS09300
TK90_RS09310	SM00382	ATPases associated with a variety of cellular activities
TK90_RS09345	SM00100	Cyclic nucleotide-monophosphate binding domain
TK90_RS09345	SM00419	helix_turn_helix, cAMP Regulatory protein
TK90_RS09350	SM00116	Domain in cystathionine beta-synthase and other proteins.
TK90_RS09365	SM00116	Domain in cystathionine beta-synthase and other proteins.
TK90_RS09370	SM00479	TK90_RS09370
TK90_RS09385	SM00052	Putative diguanylate phosphodiesterase
TK90_RS09385	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TK90_RS09385	SM00091	PAS domain
TK90_RS09385	SM00267	diguanylate cyclase
TK90_RS09515	SM00014	Acid phosphatase homologues
TK90_RS09525	SM00563	Phosphate acyltransferases
TK90_RS09535	SM00450	Rhodanese Homology Domain
TK90_RS09560	SM00849	Metallo-beta-lactamase superfamily
TK90_RS09560	SM01027	Beta-Casp domain
TK90_RS09580	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TK90_RS09585	SM01034	Sensors of blue-light using FAD
TK90_RS09595	SM00116	Domain in cystathionine beta-synthase and other proteins.
TK90_RS09595	SM01240	TK90_RS09595
TK90_RS09665	SM00155	Phospholipase D. Active site motifs.
TK90_RS09675	SM01005	Alanine racemase, C-terminal domain
TK90_RS09680	SM00382	ATPases associated with a variety of cellular activities
TK90_RS09710	SM00967	RNA 2'-O ribose methyltransferase substrate binding
TK90_RS09715	SM00316	Ribosomal protein S1-like RNA-binding domain
TK90_RS09715	SM00357	Cold shock protein domain
TK90_RS09715	SM00955	TK90_RS09715
TK90_RS09725	SM00788	Adenylosuccinate synthetase
TK90_RS09735	SM00244	prohibitin homologues
TK90_RS09740	SM00244	prohibitin homologues
TK90_RS09765	SM00358	Double-stranded RNA binding motif
TK90_RS09765	SM00535	Ribonuclease III family
TK90_RS09780	SM00838	Elongation factor G C-terminus
TK90_RS09790	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TK90_RS09830	SM00849	Metallo-beta-lactamase superfamily
TK90_RS09860	SM00729	Elongator protein 3, MiaB family, Radical SAM
TK90_RS09880	SM00936	Penicillin-binding protein 5, C-terminal domain 
TK90_RS09930	SM00650	Ribosomal RNA adenine dimethylases
TK90_RS09975	SM00316	Ribosomal protein S1-like RNA-binding domain
TK90_RS10000	SM00052	Putative diguanylate phosphodiesterase
TK90_RS10000	SM00267	diguanylate cyclase
TK90_RS10020	SM00052	Putative diguanylate phosphodiesterase
TK90_RS10030	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
TK90_RS10030	SM01232	TK90_RS10030
TK90_RS10035	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TK90_RS10035	SM00954	Region found in RelA / SpoT proteins
TK90_RS10040	SM01409	TK90_RS10040
TK90_RS10045	SM00072	Guanylate kinase homologues.
TK90_RS10075	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
TK90_RS10085	SM00487	DEAD-like helicases superfamily
TK90_RS10085	SM00490	helicase superfamily c-terminal domain
TK90_RS10115	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TK90_RS10135	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TK90_RS10135	SM00245	tail specific protease
TK90_RS10145	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TK90_RS10150	SM00450	Rhodanese Homology Domain
TK90_RS10195	SM00382	ATPases associated with a variety of cellular activities
TK90_RS10195	SM01086	C-terminal, D2-small domain, of ClpB protein
TK90_RS10205	SM00363	S4 RNA-binding domain
TK90_RS10215	SM00938	Nitrogen regulatory protein P-II
TK90_RS10230	SM00881	CoA binding domain
TK90_RS10275	SM00363	S4 RNA-binding domain
TK90_RS10340	SM00487	DEAD-like helicases superfamily
TK90_RS10340	SM00490	helicase superfamily c-terminal domain
TK90_RS10340	SM00847	Helicase associated domain (HA2)  Add an annotation
TK90_RS10355	SM00382	ATPases associated with a variety of cellular activities
TK90_RS10445	SM00822	TK90_RS10445
TK90_RS10485	SM00953	TK90_RS10485
TK90_RS10540	SM00387	Histidine kinase-like ATPases
TK90_RS10540	SM00433	TopoisomeraseII
TK90_RS10560	SM00244	prohibitin homologues
TK90_RS10580	SM00852	Probable molybdopterin binding domain
TK90_RS10650	SM00387	Histidine kinase-like ATPases
TK90_RS10650	SM00388	His Kinase A (phosphoacceptor) domain
TK90_RS10655	SM00382	ATPases associated with a variety of cellular activities
TK90_RS10655	SM00448	cheY-homologous receiver domain
TK90_RS10715	SM00116	Domain in cystathionine beta-synthase and other proteins.
TK90_RS10715	SM01091	Transporter associated domain
TK90_RS10730	SM00729	Elongator protein 3, MiaB family, Radical SAM
TK90_RS10755	SM00662	RNA polymerases D
TK90_RS10760	SM00363	S4 RNA-binding domain
TK90_RS10760	SM01390	TK90_RS10760
TK90_RS10825	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
TK90_RS10830	SM01374	TK90_RS10830
TK90_RS10850	SM00322	K homology RNA-binding domain
TK90_RS10865	SM01382	TK90_RS10865
TK90_RS10865	SM01383	TK90_RS10865
TK90_RS10885	SM01403	TK90_RS10885
TK90_RS10895	SM00838	Elongation factor G C-terminus
TK90_RS10895	SM00889	Elongation factor G, domain IV
TK90_RS10910	SM00663	RNA polymerase I subunit A N-terminus
TK90_RS10935	SM00649	Ribosomal protein L11/L12
TK90_RS10940	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
TK90_RS10940	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
TK90_RS11010	SM00957	SecA DEAD-like domain
TK90_RS11010	SM00958	SecA preprotein cross-linking domain
TK90_RS11030	SM00864	Tubulin/FtsZ family, GTPase domain
TK90_RS11030	SM00865	Tubulin/FtsZ family, C-terminal domain
TK90_RS11035	SM00842	Cell division protein FtsA
TK90_RS11160	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TK90_RS11220	SM00956	TK90_RS11220
TK90_RS11250	SM00382	ATPases associated with a variety of cellular activities
TK90_RS11250	SM00487	DEAD-like helicases superfamily
TK90_RS11250	SM00490	helicase superfamily c-terminal domain
TK90_RS11265	SM00878	Biotin carboxylase C-terminal domain
TK90_RS11300	SM00855	Phosphoglycerate mutase family
TK90_RS11305	SM00644	TK90_RS11305
TK90_RS11325	SM01091	Transporter associated domain
TK90_RS11335	SM00849	Metallo-beta-lactamase superfamily
TK90_RS11365	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
TK90_RS11365	SM01232	TK90_RS11365
TK90_RS11375	SM00028	Tetratricopeptide repeats
TK90_RS11390	SM00382	ATPases associated with a variety of cellular activities
TK90_RS11390	SM00448	cheY-homologous receiver domain
TK90_RS11395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TK90_RS11395	SM00387	Histidine kinase-like ATPases
TK90_RS11395	SM00388	His Kinase A (phosphoacceptor) domain
TK90_RS11420	SM00257	Lysin motif
TK90_RS11435	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
TK90_RS11435	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
TK90_RS11435	SM00493	TK90_RS11435
TK90_RS11450	SM01004	Delta-aminolevulinic acid dehydratase
TK90_RS11480	SM00729	Elongator protein 3, MiaB family, Radical SAM
TK90_RS11480	SM00876	Biotin and Thiamin Synthesis associated domain
TK90_RS11645	SM00052	Putative diguanylate phosphodiesterase
TK90_RS11685	SM00342	helix_turn_helix, arabinose operon control protein
TK90_RS11745	SM00382	ATPases associated with a variety of cellular activities
TK90_RS11750	SM00267	diguanylate cyclase
TK90_RS11770	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
TK90_RS11770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TK90_RS11785	SM00829	Enoylreductase
TK90_RS11810	SM00448	cheY-homologous receiver domain
TK90_RS11840	SM00100	Cyclic nucleotide-monophosphate binding domain
TK90_RS11840	SM00419	helix_turn_helix, cAMP Regulatory protein
TK90_RS11900	SM01001	AIR carboxylase
TK90_RS11930	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
TK90_RS11930	SM00475	5'-3' exonuclease
TK90_RS11940	SM00919	Malic enzyme, NAD binding domain
TK90_RS11940	SM01274	TK90_RS11940
TK90_RS11960	SM00729	Elongator protein 3, MiaB family, Radical SAM
TK90_RS11995	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
TK90_RS12000	SM00861	Transketolase, pyrimidine binding domain
TK90_RS12010	SM00996	S-adenosyl-L-homocysteine hydrolase
TK90_RS12010	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
TK90_RS12030	SM00073	Histidine Phosphotransfer domain
TK90_RS12030	SM00260	Two component signalling adaptor domain
TK90_RS12030	SM00387	Histidine kinase-like ATPases
TK90_RS12030	SM00448	cheY-homologous receiver domain
TK90_RS12030	SM01231	TK90_RS12030
TK90_RS12035	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TK90_RS12040	SM00260	Two component signalling adaptor domain
TK90_RS12045	SM00448	cheY-homologous receiver domain
TK90_RS12050	SM00448	cheY-homologous receiver domain
TK90_RS12085	SM00732	Likely ribonuclease with RNase H fold.
TK90_RS12120	SM00382	ATPases associated with a variety of cellular activities
TK90_RS12215	SM00986	Uracil DNA glycosylase superfamily
TK90_RS12215	SM00987	UreE urease accessory protein, C-terminal domain 
TK90_RS12230	SM00382	ATPases associated with a variety of cellular activities
TK90_RS12255	SM00833	Cobalamin synthesis protein cobW C-terminal domain
TK90_RS12275	SM00910	TK90_RS12275
TK90_RS12320	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TK90_RS12390	SM00487	DEAD-like helicases superfamily
TK90_RS12390	SM00490	helicase superfamily c-terminal domain
TK90_RS12400	SM00357	Cold shock protein domain
TK90_RS12400	SM00382	ATPases associated with a variety of cellular activities
TK90_RS12400	SM00959	Rho termination factor, N-terminal domain
TK90_RS12415	SM00729	Elongator protein 3, MiaB family, Radical SAM
TK90_RS12445	SM00271	DnaJ molecular chaperone homology domain
TK90_RS12450	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TK90_RS12475	SM00478	endonuclease III
TK90_RS12520	SM00487	DEAD-like helicases superfamily
TK90_RS12520	SM00490	helicase superfamily c-terminal domain
TK90_RS12545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TK90_RS12545	SM00387	Histidine kinase-like ATPases
TK90_RS12550	SM00382	ATPases associated with a variety of cellular activities
TK90_RS12550	SM00448	cheY-homologous receiver domain
TK90_RS12555	SM00028	Tetratricopeptide repeats
TK90_RS12605	SM00382	ATPases associated with a variety of cellular activities
TK90_RS12695	SM00382	ATPases associated with a variety of cellular activities
TK90_RS12770	SM00984	UDP binding domain
TK90_RS12775	SM00710	Parallel beta-helix repeats
TK90_RS12840	SM00904	Riboflavin kinase
TK90_RS12850	SM00357	Cold shock protein domain
TK90_RS12865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TK90_RS12865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TK90_RS12870	SM00382	ATPases associated with a variety of cellular activities
TK90_RS12895	SM00897	FIST N domain
TK90_RS12895	SM01204	TK90_RS12895
TK90_RS12920	SM00563	Phosphate acyltransferases
TK90_RS12940	SM01230	TK90_RS12940
TK90_RS12990	SM00382	ATPases associated with a variety of cellular activities
TK90_RS13030	SM00470	ParB-like nuclease domain
TK90_RS13045	SM01228	TK90_RS13045
TK90_RS13060	SM01234	TK90_RS13060
TK90_RS13115	SM00760	Bacterial dnaA protein helix-turn-helix domain
TK90_RS13135	SM00433	TopoisomeraseII
TK90_RS13535	SM00448	cheY-homologous receiver domain
TK90_RS14210	SM01018	B12 binding domain
