TVD_RS00010	SM00563	Phosphate acyltransferases
TVD_RS00035	SM00897	FIST N domain
TVD_RS00035	SM01204	TVD_RS00035
TVD_RS00090	SM00487	DEAD-like helicases superfamily
TVD_RS00090	SM00490	helicase superfamily c-terminal domain
TVD_RS00100	SM00357	Cold shock protein domain
TVD_RS00100	SM00382	ATPases associated with a variety of cellular activities
TVD_RS00100	SM00959	Rho termination factor, N-terminal domain
TVD_RS00115	SM00729	Elongator protein 3, MiaB family, Radical SAM
TVD_RS00145	SM00271	DnaJ molecular chaperone homology domain
TVD_RS00150	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TVD_RS00175	SM00478	endonuclease III
TVD_RS00215	SM00487	DEAD-like helicases superfamily
TVD_RS00215	SM00490	helicase superfamily c-terminal domain
TVD_RS00250	SM00387	Histidine kinase-like ATPases
TVD_RS00255	SM00382	ATPases associated with a variety of cellular activities
TVD_RS00255	SM00448	cheY-homologous receiver domain
TVD_RS00260	SM00028	Tetratricopeptide repeats
TVD_RS00320	SM00382	ATPases associated with a variety of cellular activities
TVD_RS00375	SM00530	Helix-turn-helix XRE-family like proteins 
TVD_RS00420	SM00382	ATPases associated with a variety of cellular activities
TVD_RS00490	SM00710	Parallel beta-helix repeats
TVD_RS00495	SM00984	UDP binding domain
TVD_RS00505	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TVD_RS00575	SM00904	Riboflavin kinase
TVD_RS00585	SM00357	Cold shock protein domain
TVD_RS00595	SM00052	Putative diguanylate phosphodiesterase
TVD_RS00595	SM00091	PAS domain
TVD_RS00595	SM00267	diguanylate cyclase
TVD_RS00600	SM00331	Sigma factor PP2C-like phosphatases
TVD_RS00600	SM00448	cheY-homologous receiver domain
TVD_RS00610	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TVD_RS00615	SM00448	cheY-homologous receiver domain
TVD_RS00625	SM00138	Methyltransferase, chemotaxis proteins 
TVD_RS00630	SM00091	PAS domain
TVD_RS00630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TVD_RS00640	SM00260	Two component signalling adaptor domain
TVD_RS00645	SM00073	Histidine Phosphotransfer domain
TVD_RS00645	SM00260	Two component signalling adaptor domain
TVD_RS00645	SM00387	Histidine kinase-like ATPases
TVD_RS00645	SM01231	TVD_RS00645
TVD_RS00650	SM00448	cheY-homologous receiver domain
TVD_RS00660	SM00382	ATPases associated with a variety of cellular activities
TVD_RS00665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TVD_RS00665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS00670	SM00382	ATPases associated with a variety of cellular activities
TVD_RS00715	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TVD_RS00735	SM00910	TVD_RS00735
TVD_RS00745	SM00881	CoA binding domain
TVD_RS00760	SM00382	ATPases associated with a variety of cellular activities
TVD_RS00775	SM00986	Uracil DNA glycosylase superfamily
TVD_RS00775	SM00987	UreE urease accessory protein, C-terminal domain 
TVD_RS00865	SM01209	TVD_RS00865
TVD_RS00865	SM01210	TVD_RS00865
TVD_RS00870	SM00798	AICARFT/IMPCHase bienzyme
TVD_RS00870	SM00851	MGS-like domain
TVD_RS00890	SM01018	B12 binding domain
TVD_RS00910	SM00448	cheY-homologous receiver domain
TVD_RS00935	SM00829	Enoylreductase
TVD_RS00945	SM00028	Tetratricopeptide repeats
TVD_RS00950	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
TVD_RS00950	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS00970	SM00267	diguanylate cyclase
TVD_RS00975	SM00382	ATPases associated with a variety of cellular activities
TVD_RS01065	SM00342	helix_turn_helix, arabinose operon control protein
TVD_RS01090	SM01126	TVD_RS01090
TVD_RS01105	SM00052	Putative diguanylate phosphodiesterase
TVD_RS01155	SM00849	Metallo-beta-lactamase superfamily
TVD_RS01165	SM01091	Transporter associated domain
TVD_RS01180	SM00644	TVD_RS01180
TVD_RS01185	SM00855	Phosphoglycerate mutase family
TVD_RS01220	SM00878	Biotin carboxylase C-terminal domain
TVD_RS01245	SM01004	Delta-aminolevulinic acid dehydratase
TVD_RS01260	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
TVD_RS01260	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
TVD_RS01260	SM00493	TVD_RS01260
TVD_RS01275	SM00257	Lysin motif
TVD_RS01300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS01300	SM00387	Histidine kinase-like ATPases
TVD_RS01300	SM00388	His Kinase A (phosphoacceptor) domain
TVD_RS01305	SM00382	ATPases associated with a variety of cellular activities
TVD_RS01305	SM00448	cheY-homologous receiver domain
TVD_RS01320	SM00028	Tetratricopeptide repeats
TVD_RS01330	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
TVD_RS01330	SM01232	TVD_RS01330
TVD_RS01355	SM00905	Dihydroneopterin aldolase
TVD_RS01365	SM00938	Nitrogen regulatory protein P-II
TVD_RS01375	SM00382	ATPases associated with a variety of cellular activities
TVD_RS01420	SM00564	beta-propeller repeat
TVD_RS01470	SM00530	Helix-turn-helix XRE-family like proteins 
TVD_RS01565	SM00448	cheY-homologous receiver domain
TVD_RS01565	SM00862	Transcriptional regulatory protein, C terminal
TVD_RS01570	SM00387	Histidine kinase-like ATPases
TVD_RS01580	SM00382	ATPases associated with a variety of cellular activities
TVD_RS01580	SM00487	DEAD-like helicases superfamily
TVD_RS01580	SM00490	helicase superfamily c-terminal domain
TVD_RS01580	SM00847	Helicase associated domain (HA2)  Add an annotation
TVD_RS01590	SM00836	DALR anticodon binding domain
TVD_RS01590	SM01016	Arginyl tRNA synthetase N terminal dom
TVD_RS01595	SM00487	DEAD-like helicases superfamily
TVD_RS01595	SM00490	helicase superfamily c-terminal domain
TVD_RS01615	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
TVD_RS01615	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
TVD_RS01620	SM00507	HNH nucleases
TVD_RS01630	SM00852	Probable molybdopterin binding domain
TVD_RS01635	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
TVD_RS01690	SM00382	ATPases associated with a variety of cellular activities
TVD_RS01710	SM00327	von Willebrand factor (vWF) type A domain
TVD_RS01750	SM00400	zinc finger
TVD_RS01750	SM00493	TVD_RS01750
TVD_RS01750	SM00766	DNA primase DnaG DnaB-binding
TVD_RS01765	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TVD_RS01825	SM00965	Secretin and TonB N terminus short domain
TVD_RS01885	SM00382	ATPases associated with a variety of cellular activities
TVD_RS01905	SM00116	Domain in cystathionine beta-synthase and other proteins.
TVD_RS01930	SM00382	ATPases associated with a variety of cellular activities
TVD_RS01980	SM00382	ATPases associated with a variety of cellular activities
TVD_RS01980	SM00487	DEAD-like helicases superfamily
TVD_RS01980	SM00490	helicase superfamily c-terminal domain
TVD_RS02040	SM00822	TVD_RS02040
TVD_RS02080	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TVD_RS02205	SM00842	Cell division protein FtsA
TVD_RS02210	SM00864	Tubulin/FtsZ family, GTPase domain
TVD_RS02210	SM00865	Tubulin/FtsZ family, C-terminal domain
TVD_RS02230	SM00957	SecA DEAD-like domain
TVD_RS02230	SM00958	SecA preprotein cross-linking domain
TVD_RS02300	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
TVD_RS02300	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
TVD_RS02305	SM00649	Ribosomal protein L11/L12
TVD_RS02330	SM00663	RNA polymerase I subunit A N-terminus
TVD_RS02345	SM00838	Elongation factor G C-terminus
TVD_RS02345	SM00889	Elongation factor G, domain IV
TVD_RS02355	SM01403	TVD_RS02355
TVD_RS02375	SM01382	TVD_RS02375
TVD_RS02375	SM01383	TVD_RS02375
TVD_RS02390	SM00322	K homology RNA-binding domain
TVD_RS02410	SM01374	TVD_RS02410
TVD_RS02415	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
TVD_RS02475	SM00363	S4 RNA-binding domain
TVD_RS02475	SM01390	TVD_RS02475
TVD_RS02480	SM00662	RNA polymerases D
TVD_RS02505	SM00729	Elongator protein 3, MiaB family, Radical SAM
TVD_RS02520	SM00116	Domain in cystathionine beta-synthase and other proteins.
TVD_RS02520	SM01091	Transporter associated domain
TVD_RS02615	SM00852	Probable molybdopterin binding domain
TVD_RS02635	SM00244	prohibitin homologues
TVD_RS02660	SM00387	Histidine kinase-like ATPases
TVD_RS02660	SM00433	TopoisomeraseII
TVD_RS02735	SM00953	TVD_RS02735
TVD_RS02790	SM00235	Zinc-dependent metalloprotease
TVD_RS02800	SM00450	Rhodanese Homology Domain
TVD_RS02805	SM00450	Rhodanese Homology Domain
TVD_RS02870	SM00267	diguanylate cyclase
TVD_RS02960	SM00382	ATPases associated with a variety of cellular activities
TVD_RS02975	SM00487	DEAD-like helicases superfamily
TVD_RS02975	SM00490	helicase superfamily c-terminal domain
TVD_RS02975	SM00847	Helicase associated domain (HA2)  Add an annotation
TVD_RS02985	SM00382	ATPases associated with a variety of cellular activities
TVD_RS02985	SM00448	cheY-homologous receiver domain
TVD_RS02990	SM00387	Histidine kinase-like ATPases
TVD_RS02990	SM00388	His Kinase A (phosphoacceptor) domain
TVD_RS03050	SM00062	Bacterial periplasmic substrate-binding proteins
TVD_RS03080	SM00052	Putative diguanylate phosphodiesterase
TVD_RS03080	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS03080	SM00091	PAS domain
TVD_RS03080	SM00267	diguanylate cyclase
TVD_RS03095	SM00831	Cation transporter/ATPase, N-terminus
TVD_RS03100	SM00052	Putative diguanylate phosphodiesterase
TVD_RS03100	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TVD_RS03100	SM00267	diguanylate cyclase
TVD_RS03130	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TVD_RS03130	SM00954	Region found in RelA / SpoT proteins
TVD_RS03135	SM01409	TVD_RS03135
TVD_RS03140	SM00072	Guanylate kinase homologues.
TVD_RS03170	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
TVD_RS03185	SM00116	Domain in cystathionine beta-synthase and other proteins.
TVD_RS03185	SM01240	TVD_RS03185
TVD_RS03200	SM01117	TVD_RS03200
TVD_RS03240	SM00155	Phospholipase D. Active site motifs.
TVD_RS03245	SM00091	PAS domain
TVD_RS03245	SM00267	diguanylate cyclase
TVD_RS03285	SM01060	TVD_RS03285
TVD_RS03305	SM01034	Sensors of blue-light using FAD
TVD_RS03310	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TVD_RS03330	SM00849	Metallo-beta-lactamase superfamily
TVD_RS03330	SM01027	Beta-Casp domain
TVD_RS03355	SM00062	Bacterial periplasmic substrate-binding proteins
TVD_RS03355	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
TVD_RS03365	SM00843	TVD_RS03365
TVD_RS03375	SM00382	ATPases associated with a variety of cellular activities
TVD_RS03400	SM01012	TVD_RS03400
TVD_RS03415	SM00382	ATPases associated with a variety of cellular activities
TVD_RS03430	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
TVD_RS03470	SM00487	DEAD-like helicases superfamily
TVD_RS03505	SM00450	Rhodanese Homology Domain
TVD_RS03530	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
TVD_RS03535	SM00851	MGS-like domain
TVD_RS03535	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
TVD_RS03545	SM01103	TVD_RS03545
TVD_RS03555	SM00382	ATPases associated with a variety of cellular activities
TVD_RS03610	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
TVD_RS03615	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
TVD_RS03670	SM00316	Ribosomal protein S1-like RNA-binding domain
TVD_RS03670	SM00322	K homology RNA-binding domain
TVD_RS03690	SM01387	TVD_RS03690
TVD_RS03695	SM00316	Ribosomal protein S1-like RNA-binding domain
TVD_RS03695	SM00322	K homology RNA-binding domain
TVD_RS03750	SM00507	HNH nucleases
TVD_RS03755	SM00267	diguanylate cyclase
TVD_RS03760	SM00052	Putative diguanylate phosphodiesterase
TVD_RS03760	SM00267	diguanylate cyclase
TVD_RS03775	SM00877	TVD_RS03775
TVD_RS03790	SM00450	Rhodanese Homology Domain
TVD_RS03805	SM00267	diguanylate cyclase
TVD_RS03815	SM00450	Rhodanese Homology Domain
TVD_RS03815	SM00849	Metallo-beta-lactamase superfamily
TVD_RS03835	SM00267	diguanylate cyclase
TVD_RS03845	SM00382	ATPases associated with a variety of cellular activities
TVD_RS03890	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TVD_RS03890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS03905	SM00450	Rhodanese Homology Domain
TVD_RS03935	SM00671	Sel1-like repeats.
TVD_RS03960	SM00382	ATPases associated with a variety of cellular activities
TVD_RS03985	SM00479	TVD_RS03985
TVD_RS03990	SM00116	Domain in cystathionine beta-synthase and other proteins.
TVD_RS04005	SM00116	Domain in cystathionine beta-synthase and other proteins.
TVD_RS04040	SM00382	ATPases associated with a variety of cellular activities
TVD_RS04050	SM00493	TVD_RS04050
TVD_RS04080	SM00479	TVD_RS04080
TVD_RS04125	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS04125	SM00091	PAS domain
TVD_RS04125	SM00267	diguanylate cyclase
TVD_RS04130	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS04130	SM00091	PAS domain
TVD_RS04130	SM00267	diguanylate cyclase
TVD_RS04145	SM00382	ATPases associated with a variety of cellular activities
TVD_RS04175	SM00450	Rhodanese Homology Domain
TVD_RS04185	SM00563	Phosphate acyltransferases
TVD_RS04195	SM00014	Acid phosphatase homologues
TVD_RS04230	SM00460	Transglutaminase/protease-like homologues
TVD_RS04310	SM00382	ATPases associated with a variety of cellular activities
TVD_RS04310	SM00448	cheY-homologous receiver domain
TVD_RS04315	SM00091	PAS domain
TVD_RS04315	SM00387	Histidine kinase-like ATPases
TVD_RS04315	SM00388	His Kinase A (phosphoacceptor) domain
TVD_RS04365	SM00382	ATPases associated with a variety of cellular activities
TVD_RS04390	SM00090	RIO-like kinase
TVD_RS04440	SM00382	ATPases associated with a variety of cellular activities
TVD_RS04460	SM00287	Bacterial SH3 domain homologues
TVD_RS04505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TVD_RS04505	SM00450	Rhodanese Homology Domain
TVD_RS04520	SM00100	Cyclic nucleotide-monophosphate binding domain
TVD_RS04570	SM00478	endonuclease III
TVD_RS04570	SM00525	TVD_RS04570
TVD_RS04585	SM00900	TVD_RS04585
TVD_RS04615	SM01007	Class II Aldolase and Adducin N-terminal domain
TVD_RS04655	SM00100	Cyclic nucleotide-monophosphate binding domain
TVD_RS04655	SM00419	helix_turn_helix, cAMP Regulatory protein
TVD_RS04715	SM00382	ATPases associated with a variety of cellular activities
TVD_RS04810	SM00028	Tetratricopeptide repeats
TVD_RS04810	SM01043	Bacterial transcriptional activator domain
TVD_RS04835	SM00422	helix_turn_helix, mercury resistance
TVD_RS04890	SM00271	DnaJ molecular chaperone homology domain
TVD_RS04910	SM00562	TVD_RS04910
TVD_RS04920	SM00028	Tetratricopeptide repeats
TVD_RS04940	SM00564	beta-propeller repeat
TVD_RS04945	SM00382	ATPases associated with a variety of cellular activities
TVD_RS04985	SM00052	Putative diguanylate phosphodiesterase
TVD_RS04985	SM00091	PAS domain
TVD_RS04985	SM00267	diguanylate cyclase
TVD_RS04985	SM00448	cheY-homologous receiver domain
TVD_RS04990	SM00387	Histidine kinase-like ATPases
TVD_RS05055	SM00771	ZipA, C-terminal domain (FtsZ-binding)
TVD_RS05060	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TVD_RS05060	SM00292	breast cancer carboxy-terminal domain
TVD_RS05060	SM00532	Ligase N family
TVD_RS05065	SM01321	TVD_RS05065
TVD_RS05075	SM00984	UDP binding domain
TVD_RS05085	SM00984	UDP binding domain
TVD_RS05125	SM00858	TVD_RS05125
TVD_RS05155	SM01321	TVD_RS05155
TVD_RS05225	SM00530	Helix-turn-helix XRE-family like proteins 
TVD_RS05255	SM00052	Putative diguanylate phosphodiesterase
TVD_RS05255	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS05255	SM00091	PAS domain
TVD_RS05255	SM00267	diguanylate cyclase
TVD_RS05280	SM00382	ATPases associated with a variety of cellular activities
TVD_RS05285	SM00891	ERCC4 domain
TVD_RS05295	SM00052	Putative diguanylate phosphodiesterase
TVD_RS05295	SM00091	PAS domain
TVD_RS05295	SM00267	diguanylate cyclase
TVD_RS05300	SM00052	Putative diguanylate phosphodiesterase
TVD_RS05300	SM00091	PAS domain
TVD_RS05300	SM00267	diguanylate cyclase
TVD_RS05305	SM00487	DEAD-like helicases superfamily
TVD_RS05305	SM00490	helicase superfamily c-terminal domain
TVD_RS05310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TVD_RS05310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS05330	SM00937	TVD_RS05330
TVD_RS05355	SM00387	Histidine kinase-like ATPases
TVD_RS05355	SM00388	His Kinase A (phosphoacceptor) domain
TVD_RS05360	SM00382	ATPases associated with a variety of cellular activities
TVD_RS05360	SM00448	cheY-homologous receiver domain
TVD_RS05365	SM00642	Alpha-amylase domain
TVD_RS05450	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
TVD_RS05485	SM01329	TVD_RS05485
TVD_RS05490	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TVD_RS05560	SM00460	Transglutaminase/protease-like homologues
TVD_RS05570	SM00382	ATPases associated with a variety of cellular activities
TVD_RS05580	SM00382	ATPases associated with a variety of cellular activities
TVD_RS05630	SM01323	TVD_RS05630
TVD_RS05675	SM00487	DEAD-like helicases superfamily
TVD_RS05675	SM00491	TVD_RS05675
TVD_RS05690	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS05690	SM00091	PAS domain
TVD_RS05700	SM00463	Small MutS-related domain
TVD_RS05720	SM00257	Lysin motif
TVD_RS05770	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TVD_RS05805	SM00116	Domain in cystathionine beta-synthase and other proteins.
TVD_RS05810	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS05810	SM00091	PAS domain
TVD_RS05810	SM00267	diguanylate cyclase
TVD_RS05845	SM00481	DNA polymerase alpha chain like domain
TVD_RS05850	SM00155	Phospholipase D. Active site motifs.
TVD_RS05855	SM00404	Protein tyrosine phosphatase, catalytic domain motif
TVD_RS05915	SM00530	Helix-turn-helix XRE-family like proteins 
TVD_RS05945	SM00382	ATPases associated with a variety of cellular activities
TVD_RS05960	SM00404	Protein tyrosine phosphatase, catalytic domain motif
TVD_RS06020	SM00267	diguanylate cyclase
TVD_RS06025	SM00382	ATPases associated with a variety of cellular activities
TVD_RS06035	SM00382	ATPases associated with a variety of cellular activities
TVD_RS06085	SM00487	DEAD-like helicases superfamily
TVD_RS06115	SM00487	DEAD-like helicases superfamily
TVD_RS06115	SM00490	helicase superfamily c-terminal domain
TVD_RS06145	SM01126	TVD_RS06145
TVD_RS06190	SM00155	Phospholipase D. Active site motifs.
TVD_RS06225	SM01211	TVD_RS06225
TVD_RS06235	SM00382	ATPases associated with a variety of cellular activities
TVD_RS06240	SM00382	ATPases associated with a variety of cellular activities
TVD_RS06265	SM00382	ATPases associated with a variety of cellular activities
TVD_RS06325	SM00382	ATPases associated with a variety of cellular activities
TVD_RS06325	SM00962	SRP54-type protein, GTPase domain
TVD_RS06340	SM00448	cheY-homologous receiver domain
TVD_RS06350	SM00073	Histidine Phosphotransfer domain
TVD_RS06350	SM00260	Two component signalling adaptor domain
TVD_RS06350	SM00387	Histidine kinase-like ATPases
TVD_RS06350	SM01231	TVD_RS06350
TVD_RS06355	SM00448	cheY-homologous receiver domain
TVD_RS06375	SM00260	Two component signalling adaptor domain
TVD_RS06380	SM00260	Two component signalling adaptor domain
TVD_RS06405	SM00226	Low molecular weight phosphatase family
TVD_RS06410	SM00316	Ribosomal protein S1-like RNA-binding domain
TVD_RS06415	SM00363	S4 RNA-binding domain
TVD_RS06435	SM00487	DEAD-like helicases superfamily
TVD_RS06435	SM00490	helicase superfamily c-terminal domain
TVD_RS06435	SM00982	TVD_RS06435
TVD_RS06435	SM01058	CarD-like/TRCF domain
TVD_RS06460	SM00382	ATPases associated with a variety of cellular activities
TVD_RS06470	SM00849	Metallo-beta-lactamase superfamily
TVD_RS06480	SM00434	DNA Topoisomerase IV
TVD_RS06495	SM00830	Chorismate mutase type II
TVD_RS06520	SM00316	Ribosomal protein S1-like RNA-binding domain
TVD_RS06525	SM00411	bacterial (prokaryotic) histone like domain
TVD_RS06540	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
TVD_RS06545	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TVD_RS06555	SM01160	TVD_RS06555
TVD_RS06565	SM00992	Hemimethylated DNA-binding protein YccV like
TVD_RS06575	SM01007	Class II Aldolase and Adducin N-terminal domain
TVD_RS06650	SM00487	DEAD-like helicases superfamily
TVD_RS06650	SM00490	helicase superfamily c-terminal domain
TVD_RS06720	SM00825	Beta-ketoacyl synthase
TVD_RS06730	SM00822	TVD_RS06730
TVD_RS06735	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
TVD_RS06740	SM00316	Ribosomal protein S1-like RNA-binding domain
TVD_RS06745	SM00382	ATPases associated with a variety of cellular activities
TVD_RS06745	SM01086	C-terminal, D2-small domain, of ClpB protein
TVD_RS06755	SM01329	TVD_RS06755
TVD_RS06785	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TVD_RS06790	SM00052	Putative diguanylate phosphodiesterase
TVD_RS06790	SM00267	diguanylate cyclase
TVD_RS06805	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
TVD_RS06815	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
TVD_RS06825	SM00382	ATPases associated with a variety of cellular activities
TVD_RS06845	SM00091	PAS domain
TVD_RS06845	SM00267	diguanylate cyclase
TVD_RS06845	SM01079	TVD_RS06845
TVD_RS06885	SM00052	Putative diguanylate phosphodiesterase
TVD_RS06885	SM00267	diguanylate cyclase
TVD_RS06910	SM00382	ATPases associated with a variety of cellular activities
TVD_RS06925	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TVD_RS06925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS06950	SM00729	Elongator protein 3, MiaB family, Radical SAM
TVD_RS06960	SM00052	Putative diguanylate phosphodiesterase
TVD_RS06960	SM00267	diguanylate cyclase
TVD_RS06975	SM01152	TVD_RS06975
TVD_RS06995	SM00954	Region found in RelA / SpoT proteins
TVD_RS07005	SM00465	GIY-YIG type nucleases (URI domain)
TVD_RS07070	SM00855	Phosphoglycerate mutase family
TVD_RS07115	SM00382	ATPases associated with a variety of cellular activities
TVD_RS07150	SM01192	TVD_RS07150
TVD_RS07150	SM01193	TVD_RS07150
TVD_RS07165	SM00331	Sigma factor PP2C-like phosphatases
TVD_RS07170	SM00267	diguanylate cyclase
TVD_RS07185	SM00062	Bacterial periplasmic substrate-binding proteins
TVD_RS07190	SM00977	TilS substrate C-terminal domain
TVD_RS07200	SM00481	DNA polymerase alpha chain like domain
TVD_RS07240	SM00935	Outer membrane protein (OmpH-like)
TVD_RS07250	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TVD_RS07295	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TVD_RS07315	SM00052	Putative diguanylate phosphodiesterase
TVD_RS07315	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS07315	SM00091	PAS domain
TVD_RS07315	SM00267	diguanylate cyclase
TVD_RS07315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS07355	SM00729	Elongator protein 3, MiaB family, Radical SAM
TVD_RS07375	SM00729	Elongator protein 3, MiaB family, Radical SAM
TVD_RS07390	SM00704	CDGSH-type zinc finger. Function unknown.
TVD_RS07455	SM01219	TVD_RS07455
TVD_RS07485	SM00267	diguanylate cyclase
TVD_RS07490	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TVD_RS07490	SM00267	diguanylate cyclase
TVD_RS07520	SM00829	Enoylreductase
TVD_RS07550	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TVD_RS07555	SM00248	ankyrin repeats
TVD_RS07570	SM00487	DEAD-like helicases superfamily
TVD_RS07570	SM00490	helicase superfamily c-terminal domain
TVD_RS07585	SM00849	Metallo-beta-lactamase superfamily
TVD_RS07640	SM00382	ATPases associated with a variety of cellular activities
TVD_RS07645	SM00091	PAS domain
TVD_RS07670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS07670	SM00331	Sigma factor PP2C-like phosphatases
TVD_RS07680	SM00062	Bacterial periplasmic substrate-binding proteins
TVD_RS07690	SM01068	Putative carbohydrate binding domain
TVD_RS07695	SM00052	Putative diguanylate phosphodiesterase
TVD_RS07695	SM00091	PAS domain
TVD_RS07695	SM00267	diguanylate cyclase
TVD_RS07705	SM00749	bacterial OsmY and nodulation domain
TVD_RS07710	SM00138	Methyltransferase, chemotaxis proteins 
TVD_RS07715	SM00091	PAS domain
TVD_RS07730	SM00419	helix_turn_helix, cAMP Regulatory protein
TVD_RS07735	SM00450	Rhodanese Homology Domain
TVD_RS07760	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TVD_RS07830	SM00855	Phosphoglycerate mutase family
TVD_RS07870	SM00047	Lysozyme subfamily 2
TVD_RS07915	SM00138	Methyltransferase, chemotaxis proteins 
TVD_RS07920	SM00260	Two component signalling adaptor domain
TVD_RS07920	SM00448	cheY-homologous receiver domain
TVD_RS07925	SM00858	TVD_RS07925
TVD_RS07950	SM00422	helix_turn_helix, mercury resistance
TVD_RS07955	SM00411	bacterial (prokaryotic) histone like domain
TVD_RS07960	SM00873	B3/4 domain
TVD_RS07960	SM00874	tRNA synthetase B5 domain
TVD_RS07960	SM00896	Ferredoxin-fold anticodon binding domain
TVD_RS07985	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TVD_RS07990	SM00849	Metallo-beta-lactamase superfamily
TVD_RS08025	SM00342	helix_turn_helix, arabinose operon control protein
TVD_RS08090	SM00382	ATPases associated with a variety of cellular activities
TVD_RS08105	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TVD_RS08105	SM00382	ATPases associated with a variety of cellular activities
TVD_RS08120	SM00382	ATPases associated with a variety of cellular activities
TVD_RS08125	SM01116	TVD_RS08125
TVD_RS08130	SM00052	Putative diguanylate phosphodiesterase
TVD_RS08130	SM00267	diguanylate cyclase
TVD_RS08155	SM00487	DEAD-like helicases superfamily
TVD_RS08175	SM00255	Toll - interleukin 1 - resistance
TVD_RS08180	SM00487	DEAD-like helicases superfamily
TVD_RS08225	SM00382	ATPases associated with a variety of cellular activities
TVD_RS08230	SM00267	diguanylate cyclase
TVD_RS08295	SM00487	DEAD-like helicases superfamily
TVD_RS08295	SM00490	helicase superfamily c-terminal domain
TVD_RS08335	SM00849	Metallo-beta-lactamase superfamily
TVD_RS08340	SM00448	cheY-homologous receiver domain
TVD_RS08340	SM00862	Transcriptional regulatory protein, C terminal
TVD_RS08345	SM00091	PAS domain
TVD_RS08345	SM00387	Histidine kinase-like ATPases
TVD_RS08345	SM00388	His Kinase A (phosphoacceptor) domain
TVD_RS08365	SM00382	ATPases associated with a variety of cellular activities
TVD_RS08445	SM00382	ATPases associated with a variety of cellular activities
TVD_RS08450	SM00116	Domain in cystathionine beta-synthase and other proteins.
TVD_RS08450	SM00924	MgtE intracellular N domain
TVD_RS08455	SM00116	Domain in cystathionine beta-synthase and other proteins.
TVD_RS08455	SM00924	MgtE intracellular N domain
TVD_RS08465	SM01321	TVD_RS08465
TVD_RS08480	SM00052	Putative diguanylate phosphodiesterase
TVD_RS08480	SM00062	Bacterial periplasmic substrate-binding proteins
TVD_RS08480	SM00091	PAS domain
TVD_RS08480	SM00267	diguanylate cyclase
TVD_RS08485	SM00267	diguanylate cyclase
TVD_RS08500	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS08500	SM00091	PAS domain
TVD_RS08500	SM00267	diguanylate cyclase
TVD_RS08510	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TVD_RS08510	SM00465	GIY-YIG type nucleases (URI domain)
TVD_RS08525	SM00986	Uracil DNA glycosylase superfamily
TVD_RS08525	SM00987	UreE urease accessory protein, C-terminal domain 
TVD_RS08530	SM01118	TVD_RS08530
TVD_RS08555	SM00878	Biotin carboxylase C-terminal domain
TVD_RS08590	SM00917	LeuA allosteric (dimerisation) domain
TVD_RS08595	SM00344	helix_turn_helix ASNC type
TVD_RS08620	SM00450	Rhodanese Homology Domain
TVD_RS08660	SM00478	endonuclease III
TVD_RS08665	SM00363	S4 RNA-binding domain
TVD_RS08670	SM00852	Probable molybdopterin binding domain
TVD_RS08740	SM00506	Appr-1"-p processing enzyme
TVD_RS08775	SM00052	Putative diguanylate phosphodiesterase
TVD_RS08775	SM00267	diguanylate cyclase
TVD_RS08785	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TVD_RS08790	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TVD_RS08840	SM00448	cheY-homologous receiver domain
TVD_RS08845	SM00267	diguanylate cyclase
TVD_RS08845	SM00448	cheY-homologous receiver domain
TVD_RS08855	SM00382	ATPases associated with a variety of cellular activities
TVD_RS08875	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TVD_RS08875	SM00091	PAS domain
TVD_RS08875	SM00267	diguanylate cyclase
TVD_RS08880	SM00829	Enoylreductase
TVD_RS08915	SM00052	Putative diguanylate phosphodiesterase
TVD_RS08925	SM00091	PAS domain
TVD_RS08930	SM00267	diguanylate cyclase
TVD_RS08940	SM00052	Putative diguanylate phosphodiesterase
TVD_RS08940	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS08940	SM00091	PAS domain
TVD_RS08940	SM00267	diguanylate cyclase
TVD_RS08950	SM00587	ZnF_C4 abd HLH domain containing kinases domain
TVD_RS08960	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS08960	SM00091	PAS domain
TVD_RS08960	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TVD_RS08975	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TVD_RS08980	SM00052	Putative diguanylate phosphodiesterase
TVD_RS09015	SM00052	Putative diguanylate phosphodiesterase
TVD_RS09100	SM00091	PAS domain
TVD_RS09100	SM00267	diguanylate cyclase
TVD_RS09120	SM00091	PAS domain
TVD_RS09120	SM00267	diguanylate cyclase
TVD_RS09125	SM01321	TVD_RS09125
TVD_RS09135	SM00954	Region found in RelA / SpoT proteins
TVD_RS09190	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TVD_RS09205	SM00382	ATPases associated with a variety of cellular activities
TVD_RS09225	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
TVD_RS09225	SM00534	ATPase domain of DNA mismatch repair MUTS family
TVD_RS09350	SM00831	Cation transporter/ATPase, N-terminus
TVD_RS09360	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TVD_RS09360	SM00267	diguanylate cyclase
TVD_RS09370	SM00382	ATPases associated with a variety of cellular activities
TVD_RS09400	SM00267	diguanylate cyclase
TVD_RS09415	SM00327	von Willebrand factor (vWF) type A domain
TVD_RS09445	SM00877	TVD_RS09445
TVD_RS09450	SM00877	TVD_RS09450
TVD_RS09455	SM00877	TVD_RS09455
TVD_RS09480	SM00961	Ribulose bisphosphate carboxylase, small chain
TVD_RS09610	SM00382	ATPases associated with a variety of cellular activities
TVD_RS09620	SM00981	TVD_RS09620
TVD_RS09635	SM00450	Rhodanese Homology Domain
TVD_RS09725	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TVD_RS09760	SM00052	Putative diguanylate phosphodiesterase
TVD_RS09760	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TVD_RS09760	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS09760	SM00091	PAS domain
TVD_RS09760	SM00267	diguanylate cyclase
TVD_RS09760	SM00448	cheY-homologous receiver domain
TVD_RS09765	SM00448	cheY-homologous receiver domain
TVD_RS09770	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS09770	SM00091	PAS domain
TVD_RS09770	SM00387	Histidine kinase-like ATPases
TVD_RS09770	SM00388	His Kinase A (phosphoacceptor) domain
TVD_RS09780	SM00840	TVD_RS09780
TVD_RS09850	SM00382	ATPases associated with a variety of cellular activities
TVD_RS09885	SM00867	YceI-like domain 
TVD_RS09955	SM01321	TVD_RS09955
TVD_RS09975	SM01011	Aminopeptidase P, N-terminal domain
TVD_RS10000	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TVD_RS10030	SM00834	Putative regulatory protein
TVD_RS10050	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS10050	SM00091	PAS domain
TVD_RS10050	SM00387	Histidine kinase-like ATPases
TVD_RS10050	SM00388	His Kinase A (phosphoacceptor) domain
TVD_RS10050	SM00448	cheY-homologous receiver domain
TVD_RS10090	SM00530	Helix-turn-helix XRE-family like proteins 
TVD_RS10165	SM00267	diguanylate cyclase
TVD_RS10180	SM00052	Putative diguanylate phosphodiesterase
TVD_RS10180	SM00267	diguanylate cyclase
TVD_RS10180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS10185	SM00450	Rhodanese Homology Domain
TVD_RS10190	SM00357	Cold shock protein domain
TVD_RS10200	SM00052	Putative diguanylate phosphodiesterase
TVD_RS10200	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS10200	SM00091	PAS domain
TVD_RS10200	SM00267	diguanylate cyclase
TVD_RS10200	SM01079	TVD_RS10200
TVD_RS10230	SM00316	Ribosomal protein S1-like RNA-binding domain
TVD_RS10255	SM00052	Putative diguanylate phosphodiesterase
TVD_RS10255	SM00267	diguanylate cyclase
TVD_RS10275	SM00052	Putative diguanylate phosphodiesterase
TVD_RS10285	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
TVD_RS10285	SM01232	TVD_RS10285
TVD_RS10290	SM00382	ATPases associated with a variety of cellular activities
TVD_RS10330	SM00411	bacterial (prokaryotic) histone like domain
TVD_RS10335	SM00382	ATPases associated with a variety of cellular activities
TVD_RS10335	SM00464	Found in ATP-dependent protease La (LON)
TVD_RS10340	SM00382	ATPases associated with a variety of cellular activities
TVD_RS10340	SM00994	ClpX C4-type zinc finger
TVD_RS10340	SM01086	C-terminal, D2-small domain, of ClpB protein
TVD_RS10415	SM00382	ATPases associated with a variety of cellular activities
TVD_RS10435	SM00341	Helicase and RNase D C-terminal
TVD_RS10435	SM00487	DEAD-like helicases superfamily
TVD_RS10435	SM00490	helicase superfamily c-terminal domain
TVD_RS10435	SM00956	TVD_RS10435
TVD_RS10445	SM00267	diguanylate cyclase
TVD_RS10455	SM00382	ATPases associated with a variety of cellular activities
TVD_RS10475	SM00671	Sel1-like repeats.
TVD_RS10485	SM00986	Uracil DNA glycosylase superfamily
TVD_RS10485	SM00987	UreE urease accessory protein, C-terminal domain 
TVD_RS10515	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
TVD_RS10515	SM00534	ATPase domain of DNA mismatch repair MUTS family
TVD_RS10535	SM00327	von Willebrand factor (vWF) type A domain
TVD_RS10560	SM00382	ATPases associated with a variety of cellular activities
TVD_RS10590	SM00729	Elongator protein 3, MiaB family, Radical SAM
TVD_RS10605	SM00729	Elongator protein 3, MiaB family, Radical SAM
TVD_RS10660	SM00450	Rhodanese Homology Domain
TVD_RS10720	SM00487	DEAD-like helicases superfamily
TVD_RS10755	SM00530	Helix-turn-helix XRE-family like proteins 
TVD_RS10790	SM00267	diguanylate cyclase
TVD_RS10830	SM00155	Phospholipase D. Active site motifs.
TVD_RS10840	SM01005	Alanine racemase, C-terminal domain
TVD_RS10845	SM00382	ATPases associated with a variety of cellular activities
TVD_RS10870	SM00967	RNA 2'-O ribose methyltransferase substrate binding
TVD_RS10875	SM00316	Ribosomal protein S1-like RNA-binding domain
TVD_RS10875	SM00357	Cold shock protein domain
TVD_RS10875	SM00955	TVD_RS10875
TVD_RS10885	SM00788	Adenylosuccinate synthetase
TVD_RS10895	SM00244	prohibitin homologues
TVD_RS10900	SM00244	prohibitin homologues
TVD_RS10925	SM00358	Double-stranded RNA binding motif
TVD_RS10925	SM00535	Ribonuclease III family
TVD_RS10940	SM00838	Elongation factor G C-terminus
TVD_RS10950	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TVD_RS10990	SM00849	Metallo-beta-lactamase superfamily
TVD_RS11020	SM00729	Elongator protein 3, MiaB family, Radical SAM
TVD_RS11040	SM00936	Penicillin-binding protein 5, C-terminal domain 
TVD_RS11090	SM00650	Ribosomal RNA adenine dimethylases
TVD_RS11125	SM00450	Rhodanese Homology Domain
TVD_RS11145	SM00849	Metallo-beta-lactamase superfamily
TVD_RS11170	SM00382	ATPases associated with a variety of cellular activities
TVD_RS11170	SM00448	cheY-homologous receiver domain
TVD_RS11175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS11175	SM00387	Histidine kinase-like ATPases
TVD_RS11175	SM00388	His Kinase A (phosphoacceptor) domain
TVD_RS11180	SM00849	Metallo-beta-lactamase superfamily
TVD_RS11190	SM00434	DNA Topoisomerase IV
TVD_RS11195	SM00155	Phospholipase D. Active site motifs.
TVD_RS11200	SM00052	Putative diguanylate phosphodiesterase
TVD_RS11200	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TVD_RS11200	SM00091	PAS domain
TVD_RS11200	SM00267	diguanylate cyclase
TVD_RS11205	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS11205	SM00267	diguanylate cyclase
TVD_RS11225	SM00487	DEAD-like helicases superfamily
TVD_RS11225	SM00490	helicase superfamily c-terminal domain
TVD_RS11235	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TVD_RS11235	SM00245	tail specific protease
TVD_RS11245	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TVD_RS11250	SM00450	Rhodanese Homology Domain
TVD_RS11300	SM00382	ATPases associated with a variety of cellular activities
TVD_RS11300	SM01086	C-terminal, D2-small domain, of ClpB protein
TVD_RS11310	SM00363	S4 RNA-binding domain
TVD_RS11320	SM00938	Nitrogen regulatory protein P-II
TVD_RS11330	SM00881	CoA binding domain
TVD_RS11375	SM00363	S4 RNA-binding domain
TVD_RS11415	SM00479	TVD_RS11415
TVD_RS11430	SM00257	Lysin motif
TVD_RS11450	SM00853	MutL C terminal dimerisation domain
TVD_RS11450	SM01340	TVD_RS11450
TVD_RS11455	SM00257	Lysin motif
TVD_RS11455	SM00646	TVD_RS11455
TVD_RS11475	SM00052	Putative diguanylate phosphodiesterase
TVD_RS11475	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
TVD_RS11475	SM00091	PAS domain
TVD_RS11475	SM00267	diguanylate cyclase
TVD_RS11485	SM00271	DnaJ molecular chaperone homology domain
TVD_RS11555	SM00825	Beta-ketoacyl synthase
TVD_RS11570	SM00822	TVD_RS11570
TVD_RS11610	SM00841	Elongation factor P, C-terminal
TVD_RS11610	SM01185	TVD_RS11610
TVD_RS11625	SM00052	Putative diguanylate phosphodiesterase
TVD_RS11625	SM00091	PAS domain
TVD_RS11625	SM00267	diguanylate cyclase
TVD_RS11630	SM00271	DnaJ molecular chaperone homology domain
TVD_RS11690	SM00671	Sel1-like repeats.
TVD_RS11735	SM00387	Histidine kinase-like ATPases
TVD_RS11785	SM00382	ATPases associated with a variety of cellular activities
TVD_RS11785	SM00962	SRP54-type protein, GTPase domain
TVD_RS11785	SM00963	SRP54-type protein, helical bundle domain
TVD_RS11795	SM01091	Transporter associated domain
TVD_RS11800	SM00382	ATPases associated with a variety of cellular activities
TVD_RS11840	SM00861	Transketolase, pyrimidine binding domain
TVD_RS11850	SM00670	Large family of predicted nucleotide-binding domains
TVD_RS11865	SM01130	TVD_RS11865
TVD_RS11875	SM00849	Metallo-beta-lactamase superfamily
TVD_RS11910	SM00363	S4 RNA-binding domain
TVD_RS11935	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TVD_RS11950	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TVD_RS12000	SM00464	Found in ATP-dependent protease La (LON)
TVD_RS12025	SM00091	PAS domain
TVD_RS12025	SM00267	diguanylate cyclase
TVD_RS12055	SM00479	TVD_RS12055
TVD_RS12080	SM01400	TVD_RS12080
TVD_RS12100	SM00028	Tetratricopeptide repeats
TVD_RS12110	SM00937	TVD_RS12110
TVD_RS12140	SM00845	GatB domain
TVD_RS12175	SM00341	Helicase and RNase D C-terminal
TVD_RS12175	SM00474	3'-5' exonuclease
TVD_RS12260	SM00382	ATPases associated with a variety of cellular activities
TVD_RS12290	SM00883	Chaperonin 10 Kd subunit
TVD_RS12345	SM00729	Elongator protein 3, MiaB family, Radical SAM
TVD_RS12345	SM00876	Biotin and Thiamin Synthesis associated domain
TVD_RS12480	SM00100	Cyclic nucleotide-monophosphate binding domain
TVD_RS12480	SM00419	helix_turn_helix, cAMP Regulatory protein
TVD_RS12545	SM01001	AIR carboxylase
TVD_RS12580	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
TVD_RS12585	SM00861	Transketolase, pyrimidine binding domain
TVD_RS12595	SM00996	S-adenosyl-L-homocysteine hydrolase
TVD_RS12595	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
TVD_RS12615	SM00073	Histidine Phosphotransfer domain
TVD_RS12615	SM00260	Two component signalling adaptor domain
TVD_RS12615	SM00387	Histidine kinase-like ATPases
TVD_RS12615	SM00448	cheY-homologous receiver domain
TVD_RS12615	SM01231	TVD_RS12615
TVD_RS12620	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TVD_RS12625	SM00260	Two component signalling adaptor domain
TVD_RS12630	SM00448	cheY-homologous receiver domain
TVD_RS12635	SM00448	cheY-homologous receiver domain
TVD_RS12670	SM00732	Likely ribonuclease with RNase H fold.
TVD_RS12705	SM00382	ATPases associated with a variety of cellular activities
TVD_RS12745	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
TVD_RS12745	SM00475	5'-3' exonuclease
TVD_RS12755	SM00919	Malic enzyme, NAD binding domain
TVD_RS12755	SM01274	TVD_RS12755
TVD_RS12800	SM00382	ATPases associated with a variety of cellular activities
TVD_RS12800	SM00962	SRP54-type protein, GTPase domain
TVD_RS12800	SM00963	SRP54-type protein, helical bundle domain
TVD_RS12805	SM00382	ATPases associated with a variety of cellular activities
TVD_RS12870	SM01207	TVD_RS12870
TVD_RS12895	SM00382	ATPases associated with a variety of cellular activities
TVD_RS12910	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
TVD_RS12925	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
TVD_RS12930	SM00729	Elongator protein 3, MiaB family, Radical SAM
TVD_RS12985	SM00382	ATPases associated with a variety of cellular activities
TVD_RS12985	SM00448	cheY-homologous receiver domain
TVD_RS12990	SM00387	Histidine kinase-like ATPases
TVD_RS12990	SM00388	His Kinase A (phosphoacceptor) domain
TVD_RS13015	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
TVD_RS13015	SM00474	3'-5' exonuclease
TVD_RS13015	SM00475	5'-3' exonuclease
TVD_RS13015	SM00482	DNA polymerase A domain
TVD_RS13065	SM00267	diguanylate cyclase
TVD_RS13130	SM00267	diguanylate cyclase
TVD_RS13130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS13145	SM00861	Transketolase, pyrimidine binding domain
TVD_RS13230	SM00849	Metallo-beta-lactamase superfamily
TVD_RS13245	SM00100	Cyclic nucleotide-monophosphate binding domain
TVD_RS13270	SM00487	DEAD-like helicases superfamily
TVD_RS13290	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
TVD_RS13335	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
TVD_RS13335	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS13340	SM00052	Putative diguanylate phosphodiesterase
TVD_RS13340	SM00267	diguanylate cyclase
TVD_RS13345	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
TVD_RS13345	SM00267	diguanylate cyclase
TVD_RS13360	SM00331	Sigma factor PP2C-like phosphatases
TVD_RS13360	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
TVD_RS13365	SM00028	Tetratricopeptide repeats
TVD_RS13365	SM00257	Lysin motif
TVD_RS13380	SM00220	Serine/Threonine protein kinases, catalytic domain
TVD_RS13380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TVD_RS13385	SM00240	Forkhead associated domain
TVD_RS13430	SM00448	cheY-homologous receiver domain
TVD_RS13430	SM00850	LytTr DNA-binding domain
TVD_RS13480	SM00387	Histidine kinase-like ATPases
TVD_RS13480	SM00433	TopoisomeraseII
TVD_RS13490	SM00480	DNA polymerase III beta subunit
TVD_RS13495	SM00382	ATPases associated with a variety of cellular activities
TVD_RS13495	SM00760	Bacterial dnaA protein helix-turn-helix domain
TVD_RS13510	SM01234	TVD_RS13510
TVD_RS13530	SM01228	TVD_RS13530
TVD_RS13545	SM00470	ParB-like nuclease domain
TVD_RS13585	SM00382	ATPases associated with a variety of cellular activities
TVD_RS13635	SM00382	ATPases associated with a variety of cellular activities
TVD_RS13635	SM01086	C-terminal, D2-small domain, of ClpB protein
TVD_RS13755	SM00347	helix_turn_helix multiple antibiotic resistance protein
TVD_RS13790	SM01230	TVD_RS13790
