locus-tag class description TBD_RS00005 PF11638 DnaA N-terminal domain TBD_RS00005 PF00308 Bacterial dnaA protein TBD_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix TBD_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain TBD_RS00010 PF02767 DNA polymerase III beta subunit, central domain TBD_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain TBD_RS00015 PF00204 DNA gyrase B TBD_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus TBD_RS00015 PF18053 DNA gyrase B subunit insert domain TBD_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS00015 PF01751 Toprim domain TBD_RS00020 PF16242 Pyridoxamine 5'-phosphate oxidase like TBD_RS00025 PF00216 Bacterial DNA-binding protein TBD_RS00040 PF01131 DNA topoisomerase TBD_RS00040 PF13368 Topoisomerase C-terminal repeat TBD_RS00040 PF01751 Toprim domain TBD_RS00045 PF04361 Protein of unknown function (DUF494) TBD_RS00050 PF02481 DNA recombination-mediator protein A TBD_RS00050 PF17782 DprA winged helix domain TBD_RS00060 PF01327 Polypeptide deformylase TBD_RS00065 PF02911 Formyl transferase, C-terminal domain TBD_RS00065 PF00551 Formyl transferase TBD_RS00070 PF01029 NusB family TBD_RS00070 PF01189 16S rRNA methyltransferase RsmB/F TBD_RS00080 PF00672 HAMP domain TBD_RS00080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS00080 PF00989 PAS fold TBD_RS00080 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS00085 PF00158 Sigma-54 interaction domain TBD_RS00085 PF00072 Response regulator receiver domain TBD_RS00085 PF02954 Bacterial regulatory protein, Fis family TBD_RS00090 PF02254 TrkA-N domain TBD_RS00090 PF02080 TrkA-C domain TBD_RS00095 PF02386 Cation transport protein TBD_RS00100 PF02386 Cation transport protein TBD_RS00110 PF04362 Bacterial Fe(2+) trafficking TBD_RS00115 PF01895 PhoU domain TBD_RS00125 PF00293 NUDIX domain TBD_RS00135 PF01960 ArgJ family TBD_RS00155 PF13361 UvrD-like helicase C-terminal domain TBD_RS00155 PF00580 UvrD/REP helicase N-terminal domain TBD_RS00155 PF12705 PD-(D/E)XK nuclease superfamily TBD_RS00165 PF00037 4Fe-4S binding domain TBD_RS00165 PF11953 Domain of unknown function (DUF3470) TBD_RS00170 PF00085 Thioredoxin TBD_RS00175 PF07497 Rho termination factor, RNA-binding domain TBD_RS00175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TBD_RS00175 PF07498 Rho termination factor, N-terminal domain TBD_RS00180 PF01197 Ribosomal protein L31 TBD_RS00185 PF01435 Peptidase family M48 TBD_RS00195 PF12804 MobA-like NTP transferase domain TBD_RS00205 PF02754 Cysteine-rich domain TBD_RS00205 PF13183 4Fe-4S dicluster domain TBD_RS00210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TBD_RS00215 PF01565 FAD binding domain TBD_RS00220 PF02913 FAD linked oxidases, C-terminal domain TBD_RS00220 PF01565 FAD binding domain TBD_RS00235 PF01614 Bacterial transcriptional regulator TBD_RS00235 PF09339 IclR helix-turn-helix domain TBD_RS00270 PF01541 GIY-YIG catalytic domain TBD_RS00275 PF01734 Patatin-like phospholipase TBD_RS00280 PF00317 Ribonucleotide reductase, all-alpha domain TBD_RS00280 PF02867 Ribonucleotide reductase, barrel domain TBD_RS00280 PF03477 ATP cone domain TBD_RS00285 PF01636 Phosphotransferase enzyme family TBD_RS00290 PF13537 Glutamine amidotransferase domain TBD_RS00290 PF00733 Asparagine synthase TBD_RS00295 PF13406 Transglycosylase SLT domain TBD_RS00330 PF00753 Metallo-beta-lactamase superfamily TBD_RS00335 PF00491 Arginase family TBD_RS00345 PF04055 Radical SAM superfamily TBD_RS00345 PF13186 Iron-sulfur cluster-binding domain TBD_RS00350 PF17805 AsnC-like ligand binding domain TBD_RS00350 PF13404 AsnC-type helix-turn-helix domain TBD_RS00355 PF17805 AsnC-like ligand binding domain TBD_RS00355 PF13404 AsnC-type helix-turn-helix domain TBD_RS00360 PF17805 AsnC-like ligand binding domain TBD_RS00360 PF13404 AsnC-type helix-turn-helix domain TBD_RS00370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TBD_RS00375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TBD_RS00395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TBD_RS00395 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TBD_RS00405 PF00768 D-alanyl-D-alanine carboxypeptidase TBD_RS00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS00410 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS00415 PF00563 EAL domain TBD_RS00415 PF03707 Bacterial signalling protein N terminal repeat TBD_RS00415 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS00435 PF00474 Sodium:solute symporter family TBD_RS00440 PF02811 PHP domain TBD_RS00440 PF07733 Bacterial DNA polymerase III alpha NTPase domain TBD_RS00440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TBD_RS00440 PF14579 Helix-hairpin-helix motif TBD_RS00440 PF00929 Exonuclease TBD_RS00450 PF00118 TCP-1/cpn60 chaperonin family TBD_RS00455 PF00166 Chaperonin 10 Kd subunit TBD_RS00460 PF00202 Aminotransferase class-III TBD_RS00470 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TBD_RS00470 PF00753 Metallo-beta-lactamase superfamily TBD_RS00470 PF10996 Beta-Casp domain TBD_RS00475 PF02253 Phospholipase A1 TBD_RS00480 PF13180 PDZ domain TBD_RS00485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TBD_RS00485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TBD_RS00485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TBD_RS00490 PF01370 NAD dependent epimerase/dehydratase family TBD_RS00500 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family TBD_RS00505 PF05433 Glycine zipper 2TM domain TBD_RS00510 PF00156 Phosphoribosyl transferase domain TBD_RS00515 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TBD_RS00520 PF01467 Cytidylyltransferase-like TBD_RS00525 PF04972 BON domain TBD_RS00530 PF13580 SIS domain TBD_RS00535 PF02021 Uncharacterised protein family UPF0102 TBD_RS00540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TBD_RS00545 PF01979 Amidohydrolase family TBD_RS00550 PF02381 MraZ protein, putative antitoxin-like TBD_RS00555 PF01795 MraW methylase family TBD_RS00560 PF04999 Cell division protein FtsL TBD_RS00565 PF00905 Penicillin binding protein transpeptidase domain TBD_RS00565 PF03717 Penicillin-binding Protein dimerisation domain TBD_RS00570 PF01225 Mur ligase family, catalytic domain TBD_RS00570 PF02875 Mur ligase family, glutamate ligase domain TBD_RS00570 PF08245 Mur ligase middle domain TBD_RS00575 PF08245 Mur ligase middle domain TBD_RS00575 PF02875 Mur ligase family, glutamate ligase domain TBD_RS00575 PF01225 Mur ligase family, catalytic domain TBD_RS00580 PF00953 Glycosyl transferase family 4 TBD_RS00580 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TBD_RS00585 PF02875 Mur ligase family, glutamate ligase domain TBD_RS00585 PF08245 Mur ligase middle domain TBD_RS00590 PF01098 Cell cycle protein TBD_RS00595 PF04101 Glycosyltransferase family 28 C-terminal domain TBD_RS00595 PF03033 Glycosyltransferase family 28 N-terminal domain TBD_RS00600 PF08245 Mur ligase middle domain TBD_RS00600 PF02875 Mur ligase family, glutamate ligase domain TBD_RS00600 PF01225 Mur ligase family, catalytic domain TBD_RS00605 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TBD_RS00605 PF01565 FAD binding domain TBD_RS00610 PF01820 D-ala D-ala ligase N-terminus TBD_RS00610 PF07478 D-ala D-ala ligase C-terminus TBD_RS00615 PF08478 POTRA domain, FtsQ-type TBD_RS00615 PF03799 Cell division protein FtsQ TBD_RS00620 PF02491 SHS2 domain inserted in FTSA TBD_RS00625 PF00091 Tubulin/FtsZ family, GTPase domain TBD_RS00625 PF12327 FtsZ family, C-terminal domain TBD_RS00630 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase TBD_RS00640 PF00691 OmpA family TBD_RS00640 PF05736 OprF membrane domain TBD_RS00645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TBD_RS00650 PF00034 Cytochrome c TBD_RS00660 PF07517 SecA DEAD-like domain TBD_RS00660 PF02810 SEC-C motif TBD_RS00660 PF07516 SecA Wing and Scaffold domain TBD_RS00660 PF01043 SecA preprotein cross-linking domain TBD_RS00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS00680 PF08521 Two-component sensor kinase N-terminal TBD_RS00680 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS00685 PF00486 Transcriptional regulatory protein, C terminal TBD_RS00685 PF00072 Response regulator receiver domain TBD_RS00705 PF00884 Sulfatase TBD_RS00720 PF00873 AcrB/AcrD/AcrF family TBD_RS00735 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TBD_RS00750 PF03881 Fructosamine kinase TBD_RS00765 PF00005 ABC transporter TBD_RS00765 PF12848 ABC transporter TBD_RS00770 PF00563 EAL domain TBD_RS00770 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS00770 PF08448 PAS fold TBD_RS00780 PF00696 Amino acid kinase family TBD_RS00780 PF00583 Acetyltransferase (GNAT) family TBD_RS00785 PF04452 RNA methyltransferase TBD_RS00800 PF00459 Inositol monophosphatase family TBD_RS00805 PF02779 Transketolase, pyrimidine binding domain TBD_RS00805 PF00456 Transketolase, thiamine diphosphate binding domain TBD_RS00805 PF02780 Transketolase, C-terminal domain TBD_RS00810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TBD_RS00810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TBD_RS00815 PF00162 Phosphoglycerate kinase TBD_RS00820 PF00224 Pyruvate kinase, barrel domain TBD_RS00820 PF02887 Pyruvate kinase, alpha/beta domain TBD_RS00825 PF01116 Fructose-bisphosphate aldolase class-II TBD_RS00840 PF00580 UvrD/REP helicase N-terminal domain TBD_RS00840 PF13361 UvrD-like helicase C-terminal domain TBD_RS00850 PF00149 Calcineurin-like phosphoesterase TBD_RS00865 PF00294 pfkB family carbohydrate kinase TBD_RS00870 PF01219 Prokaryotic diacylglycerol kinase TBD_RS00875 PF02347 Glycine cleavage system P-protein TBD_RS00880 PF08534 Redoxin TBD_RS00890 PF02347 Glycine cleavage system P-protein TBD_RS00895 PF01597 Glycine cleavage H-protein TBD_RS00900 PF01571 Aminomethyltransferase folate-binding domain TBD_RS00900 PF08669 Glycine cleavage T-protein C-terminal barrel domain TBD_RS00915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TBD_RS00915 PF02785 Biotin carboxylase C-terminal domain TBD_RS00915 PF00289 Biotin carboxylase, N-terminal domain TBD_RS00920 PF00364 Biotin-requiring enzyme TBD_RS00925 PF01220 Dehydroquinase class II TBD_RS00930 PF08534 Redoxin TBD_RS00935 PF01578 Cytochrome C assembly protein TBD_RS00940 PF05140 ResB-like family TBD_RS00945 PF00034 Cytochrome c TBD_RS00950 PF01926 50S ribosome-binding GTPase TBD_RS00955 PF00490 Delta-aminolevulinic acid dehydratase TBD_RS00965 PF00899 ThiF family TBD_RS00965 PF14461 Prokaryotic E2 family B TBD_RS00990 PF00158 Sigma-54 interaction domain TBD_RS00990 PF00072 Response regulator receiver domain TBD_RS00990 PF02954 Bacterial regulatory protein, Fis family TBD_RS00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS00995 PF00497 Bacterial extracellular solute-binding proteins, family 3 TBD_RS00995 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS00995 PF01627 Hpt domain TBD_RS00995 PF00072 Response regulator receiver domain TBD_RS01000 PF02397 Bacterial sugar transferase TBD_RS01010 PF00905 Penicillin binding protein transpeptidase domain TBD_RS01010 PF17092 Penicillin-binding protein OB-like domain TBD_RS01010 PF00912 Transglycosylase TBD_RS01015 PF11104 Type IV pilus assembly protein PilM; TBD_RS01025 PF04350 Pilus assembly protein, PilO TBD_RS01035 PF11741 AMIN domain TBD_RS01035 PF07660 Secretin and TonB N terminus short domain TBD_RS01035 PF03958 Bacterial type II/III secretion system short domain TBD_RS01035 PF00263 Bacterial type II and III secretion system protein TBD_RS01040 PF01202 Shikimate kinase TBD_RS01055 PF01747 ATP-sulfurylase TBD_RS01055 PF14306 PUA-like domain TBD_RS01070 PF03109 ABC1 family TBD_RS01080 PF01209 ubiE/COQ5 methyltransferase family TBD_RS01085 PF00486 Transcriptional regulatory protein, C terminal TBD_RS01085 PF00072 Response regulator receiver domain TBD_RS01090 PF11808 Phosphate regulon sensor protein PhoR TBD_RS01090 PF00989 PAS fold TBD_RS01090 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS01090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS01100 PF01565 FAD binding domain TBD_RS01100 PF02913 FAD linked oxidases, C-terminal domain TBD_RS01105 PF05661 Protein of unknown function (DUF808) TBD_RS01110 PF02445 Quinolinate synthetase A protein TBD_RS01115 PF11638 DnaA N-terminal domain TBD_RS01115 PF08299 Bacterial dnaA protein helix-turn-helix TBD_RS01115 PF00308 Bacterial dnaA protein TBD_RS01120 PF00085 Thioredoxin TBD_RS01135 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TBD_RS01135 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TBD_RS01140 PF01491 Frataxin-like domain TBD_RS01150 PF00206 Lyase TBD_RS01150 PF14698 Argininosuccinate lyase C-terminal TBD_RS01155 PF06580 Histidine kinase TBD_RS01155 PF07694 5TMR of 5TMR-LYT TBD_RS01155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS01160 PF00072 Response regulator receiver domain TBD_RS01160 PF04397 LytTr DNA-binding domain TBD_RS01165 PF00293 NUDIX domain TBD_RS01170 PF00809 Pterin binding enzyme TBD_RS01170 PF02574 Homocysteine S-methyltransferase TBD_RS01170 PF02310 B12 binding domain TBD_RS01170 PF02965 Vitamin B12 dependent methionine synthase, activation domain TBD_RS01170 PF02607 B12 binding domain TBD_RS01185 PF13335 Magnesium chelatase, subunit ChlI C-terminal TBD_RS01185 PF01078 Magnesium chelatase, subunit ChlI TBD_RS01190 PF04380 Membrane fusogenic activity TBD_RS01200 PF00543 Nitrogen regulatory protein P-II TBD_RS01205 PF00909 Ammonium Transporter Family TBD_RS01210 PF01227 GTP cyclohydrolase I TBD_RS01220 PF00691 OmpA family TBD_RS01230 PF04204 Homoserine O-succinyltransferase TBD_RS01235 PF02405 Permease MlaE TBD_RS01240 PF00005 ABC transporter TBD_RS01265 PF07690 Major Facilitator Superfamily TBD_RS01270 PF03372 Endonuclease/Exonuclease/phosphatase family TBD_RS01275 PF00156 Phosphoribosyl transferase domain TBD_RS01285 PF02934 GatB/GatE catalytic domain TBD_RS01285 PF02637 GatB domain TBD_RS01290 PF01425 Amidase TBD_RS01295 PF02686 Glu-tRNAGln amidotransferase C subunit TBD_RS01310 PF04093 rod shape-determining protein MreD TBD_RS01315 PF03717 Penicillin-binding Protein dimerisation domain TBD_RS01315 PF00905 Penicillin binding protein transpeptidase domain TBD_RS01320 PF01098 Cell cycle protein TBD_RS01325 PF03330 Lytic transglycolase TBD_RS01325 PF05036 Sporulation related domain TBD_RS01330 PF00768 D-alanyl-D-alanine carboxypeptidase TBD_RS01330 PF07943 Penicillin-binding protein 5, C-terminal domain TBD_RS01335 PF01063 Amino-transferase class IV TBD_RS01340 PF04359 Protein of unknown function (DUF493) TBD_RS01345 PF03099 Biotin/lipoate A/B protein ligase family TBD_RS01350 PF02885 Glycosyl transferase family, helical bundle domain TBD_RS01350 PF00591 Glycosyl transferase family, a/b domain TBD_RS01355 PF00355 Rieske [2Fe-2S] domain TBD_RS01360 PF08534 Redoxin TBD_RS01370 PF04055 Radical SAM superfamily TBD_RS01370 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family TBD_RS01380 PF01061 ABC-2 type transporter TBD_RS01385 PF00005 ABC transporter TBD_RS01405 PF02563 Polysaccharide biosynthesis/export protein TBD_RS01405 PF10531 SLBB domain TBD_RS01415 PF13614 AAA domain TBD_RS01425 PF01471 Putative peptidoglycan binding domain TBD_RS01425 PF13401 AAA domain TBD_RS01430 PF02350 UDP-N-acetylglucosamine 2-epimerase TBD_RS01435 PF01522 Polysaccharide deacetylase TBD_RS01455 PF13439 Glycosyltransferase Family 4 TBD_RS01455 PF00534 Glycosyl transferases group 1 TBD_RS01460 PF00733 Asparagine synthase TBD_RS01460 PF13537 Glutamine amidotransferase domain TBD_RS01465 PF00534 Glycosyl transferases group 1 TBD_RS01470 PF13439 Glycosyltransferase Family 4 TBD_RS01470 PF00534 Glycosyl transferases group 1 TBD_RS01505 PF00535 Glycosyl transferase family 2 TBD_RS01510 PF00534 Glycosyl transferases group 1 TBD_RS01510 PF13439 Glycosyltransferase Family 4 TBD_RS01525 PF13439 Glycosyltransferase Family 4 TBD_RS01525 PF00534 Glycosyl transferases group 1 TBD_RS01530 PF00884 Sulfatase TBD_RS01545 PF00535 Glycosyl transferase family 2 TBD_RS01555 PF01943 Polysaccharide biosynthesis protein TBD_RS01575 PF01761 3-dehydroquinate synthase TBD_RS01580 PF01966 HD domain TBD_RS01580 PF13286 Phosphohydrolase-associated domain TBD_RS01585 PF00156 Phosphoribosyl transferase domain TBD_RS01595 PF06968 Biotin and Thiamin Synthesis associated domain TBD_RS01595 PF04055 Radical SAM superfamily TBD_RS01600 PF00155 Aminotransferase class I and II TBD_RS01605 PF00561 alpha/beta hydrolase fold TBD_RS01610 PF08241 Methyltransferase domain TBD_RS01625 PF00116 Cytochrome C oxidase subunit II, periplasmic domain TBD_RS01625 PF02790 Cytochrome C oxidase subunit II, transmembrane domain TBD_RS01630 PF00115 Cytochrome C and Quinol oxidase polypeptide I TBD_RS01635 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 TBD_RS01645 PF00510 Cytochrome c oxidase subunit III TBD_RS01665 PF02628 Cytochrome oxidase assembly protein TBD_RS01670 PF01040 UbiA prenyltransferase family TBD_RS01675 PF02082 Transcriptional regulator TBD_RS01680 PF02630 SCO1/SenC TBD_RS01685 PF00115 Cytochrome C and Quinol oxidase polypeptide I TBD_RS01700 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP TBD_RS01700 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TBD_RS01705 PF13746 4Fe-4S dicluster domain TBD_RS01705 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TBD_RS01705 PF12801 4Fe-4S binding domain TBD_RS01720 PF00140 Sigma-70 factor, region 1.2 TBD_RS01720 PF04542 Sigma-70 region 2 TBD_RS01720 PF04545 Sigma-70, region 4 TBD_RS01750 PF01590 GAF domain TBD_RS01750 PF00360 Phytochrome region TBD_RS01750 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS01750 PF00563 EAL domain TBD_RS01755 PF03472 Autoinducer binding domain TBD_RS01755 PF00196 Bacterial regulatory proteins, luxR family TBD_RS01775 PF05860 haemagglutination activity domain TBD_RS01780 PF00565 Staphylococcal nuclease homologue TBD_RS01780 PF00149 Calcineurin-like phosphoesterase TBD_RS01780 PF00746 LPXTG cell wall anchor motif TBD_RS01780 PF02872 5'-nucleotidase, C-terminal domain TBD_RS01785 PF01618 MotA/TolQ/ExbB proton channel family TBD_RS01790 PF02472 Biopolymer transport protein ExbD/TolR TBD_RS01835 PF00391 PEP-utilising enzyme, mobile domain TBD_RS01835 PF02896 PEP-utilising enzyme, TIM barrel domain TBD_RS01835 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TBD_RS01850 PF18075 FtsX extracellular domain TBD_RS01855 PF00005 ABC transporter TBD_RS01860 PF00448 SRP54-type protein, GTPase domain TBD_RS01860 PF02881 SRP54-type protein, helical bundle domain TBD_RS01865 PF05193 Peptidase M16 inactive domain TBD_RS01865 PF00675 Insulinase (Peptidase family M16) TBD_RS01870 PF05193 Peptidase M16 inactive domain TBD_RS01870 PF00675 Insulinase (Peptidase family M16) TBD_RS01880 PF01467 Cytidylyltransferase-like TBD_RS01885 PF00037 4Fe-4S binding domain TBD_RS01895 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TBD_RS01895 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TBD_RS01895 PF06827 Zinc finger found in FPG and IleRS TBD_RS01905 PF03550 Outer membrane lipoprotein LolB TBD_RS01910 PF08544 GHMP kinases C terminal TBD_RS01910 PF00288 GHMP kinases N terminal domain TBD_RS01920 PF14572 Phosphoribosyl synthetase-associated domain TBD_RS01920 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TBD_RS01925 PF14693 Ribosomal protein TL5, C-terminal domain TBD_RS01925 PF01386 Ribosomal L25p family TBD_RS01930 PF01195 Peptidyl-tRNA hydrolase TBD_RS01935 PF01926 50S ribosome-binding GTPase TBD_RS01935 PF06071 Protein of unknown function (DUF933) TBD_RS01955 PF03144 Elongation factor Tu domain 2 TBD_RS01955 PF00009 Elongation factor Tu GTP binding domain TBD_RS01955 PF03143 Elongation factor Tu C-terminal domain TBD_RS01965 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TBD_RS01970 PF00467 KOW motif TBD_RS01970 PF02357 Transcription termination factor nusG TBD_RS01975 PF03946 Ribosomal protein L11, N-terminal domain TBD_RS01975 PF00298 Ribosomal protein L11, RNA binding domain TBD_RS01980 PF00687 Ribosomal protein L1p/L10e family TBD_RS01985 PF00466 Ribosomal protein L10 TBD_RS01990 PF16320 Ribosomal protein L7/L12 dimerisation domain TBD_RS01990 PF00542 Ribosomal protein L7/L12 C-terminal domain TBD_RS01995 PF04560 RNA polymerase Rpb2, domain 7 TBD_RS01995 PF00562 RNA polymerase Rpb2, domain 6 TBD_RS01995 PF10385 RNA polymerase beta subunit external 1 domain TBD_RS01995 PF04565 RNA polymerase Rpb2, domain 3 TBD_RS01995 PF04563 RNA polymerase beta subunit TBD_RS01995 PF04561 RNA polymerase Rpb2, domain 2 TBD_RS02000 PF05000 RNA polymerase Rpb1, domain 4 TBD_RS02000 PF04983 RNA polymerase Rpb1, domain 3 TBD_RS02000 PF00623 RNA polymerase Rpb1, domain 2 TBD_RS02000 PF04997 RNA polymerase Rpb1, domain 1 TBD_RS02000 PF04998 RNA polymerase Rpb1, domain 5 TBD_RS02005 PF00164 Ribosomal protein S12/S23 TBD_RS02010 PF00177 Ribosomal protein S7p/S5e TBD_RS02015 PF14492 Elongation Factor G, domain II TBD_RS02015 PF00679 Elongation factor G C-terminus TBD_RS02015 PF00009 Elongation factor Tu GTP binding domain TBD_RS02015 PF03144 Elongation factor Tu domain 2 TBD_RS02015 PF03764 Elongation factor G, domain IV TBD_RS02020 PF00009 Elongation factor Tu GTP binding domain TBD_RS02020 PF03144 Elongation factor Tu domain 2 TBD_RS02020 PF03143 Elongation factor Tu C-terminal domain TBD_RS02025 PF00338 Ribosomal protein S10p/S20e TBD_RS02030 PF00297 Ribosomal protein L3 TBD_RS02035 PF00573 Ribosomal protein L4/L1 family TBD_RS02040 PF00276 Ribosomal protein L23 TBD_RS02045 PF03947 Ribosomal Proteins L2, C-terminal domain TBD_RS02045 PF00181 Ribosomal Proteins L2, RNA binding domain TBD_RS02050 PF00203 Ribosomal protein S19 TBD_RS02055 PF00237 Ribosomal protein L22p/L17e TBD_RS02060 PF07650 KH domain TBD_RS02060 PF00189 Ribosomal protein S3, C-terminal domain TBD_RS02065 PF00252 Ribosomal protein L16p/L10e TBD_RS02070 PF00831 Ribosomal L29 protein TBD_RS02075 PF00366 Ribosomal protein S17 TBD_RS02080 PF00238 Ribosomal protein L14p/L23e TBD_RS02085 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TBD_RS02085 PF00467 KOW motif TBD_RS02090 PF00673 ribosomal L5P family C-terminus TBD_RS02090 PF00281 Ribosomal protein L5 TBD_RS02095 PF00253 Ribosomal protein S14p/S29e TBD_RS02100 PF00410 Ribosomal protein S8 TBD_RS02105 PF00347 Ribosomal protein L6 TBD_RS02110 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TBD_RS02115 PF00333 Ribosomal protein S5, N-terminal domain TBD_RS02115 PF03719 Ribosomal protein S5, C-terminal domain TBD_RS02120 PF00327 Ribosomal protein L30p/L7e TBD_RS02125 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TBD_RS02130 PF00344 SecY translocase TBD_RS02135 PF01176 Translation initiation factor 1A / IF-1 TBD_RS02140 PF00416 Ribosomal protein S13/S18 TBD_RS02145 PF00411 Ribosomal protein S11 TBD_RS02150 PF01479 S4 domain TBD_RS02150 PF00163 Ribosomal protein S4/S9 N-terminal domain TBD_RS02155 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TBD_RS02155 PF01000 RNA polymerase Rpb3/RpoA insert domain TBD_RS02155 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TBD_RS02160 PF01196 Ribosomal protein L17 TBD_RS02170 PF05161 MOFRL family TBD_RS02170 PF13660 Domain of unknown function (DUF4147) TBD_RS02180 PF01479 S4 domain TBD_RS02180 PF00849 RNA pseudouridylate synthase TBD_RS02185 PF17755 UvrA DNA-binding domain TBD_RS02185 PF17760 UvrA interaction domain TBD_RS02190 PF07690 Major Facilitator Superfamily TBD_RS02195 PF00436 Single-strand binding protein family TBD_RS02200 PF07715 TonB-dependent Receptor Plug Domain TBD_RS02200 PF00593 TonB dependent receptor TBD_RS02215 PF01336 OB-fold nucleic acid binding domain TBD_RS02215 PF00152 tRNA synthetases class II (D, K and N) TBD_RS02215 PF02938 GAD domain TBD_RS02225 PF00293 NUDIX domain TBD_RS02235 PF13091 PLD-like domain TBD_RS02240 PF04228 Putative neutral zinc metallopeptidase TBD_RS02245 PF00267 Gram-negative porin TBD_RS02260 PF02566 OsmC-like protein TBD_RS02270 PF00572 Ribosomal protein L13 TBD_RS02275 PF00380 Ribosomal protein S9/S16 TBD_RS02280 PF02774 Semialdehyde dehydrogenase, dimerisation domain TBD_RS02280 PF01118 Semialdehyde dehydrogenase, NAD binding domain TBD_RS02285 PF01521 Iron-sulphur cluster biosynthesis TBD_RS02290 PF03702 Anhydro-N-acetylmuramic acid kinase TBD_RS02295 PF01551 Peptidase family M23 TBD_RS02295 PF10145 Phage-related minor tail protein TBD_RS02295 PF01464 Transglycosylase SLT domain TBD_RS02300 PF00579 tRNA synthetases class I (W and Y) TBD_RS02300 PF01479 S4 domain TBD_RS02330 PF03099 Biotin/lipoate A/B protein ligase family TBD_RS02330 PF08279 HTH domain TBD_RS02330 PF02237 Biotin protein ligase C terminal domain TBD_RS02335 PF03309 Type III pantothenate kinase TBD_RS02345 PF01040 UbiA prenyltransferase family TBD_RS02350 PF04345 Chorismate lyase TBD_RS02370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TBD_RS02375 PF17191 RecG wedge domain TBD_RS02375 PF00270 DEAD/DEAH box helicase TBD_RS02375 PF00271 Helicase conserved C-terminal domain TBD_RS02380 PF01042 Endoribonuclease L-PSP TBD_RS02385 PF04607 Region found in RelA / SpoT proteins TBD_RS02385 PF13291 ACT domain TBD_RS02385 PF02824 TGS domain TBD_RS02390 PF01192 RNA polymerase Rpb6 TBD_RS02395 PF00625 Guanylate kinase TBD_RS02400 PF08340 Domain of unknown function (DUF1732) TBD_RS02400 PF03755 YicC-like family, N-terminal region TBD_RS02405 PF00069 Protein kinase domain TBD_RS02415 PF01138 3' exoribonuclease family, domain 1 TBD_RS02415 PF03725 3' exoribonuclease family, domain 2 TBD_RS02420 PF01725 Ham1 family TBD_RS02425 PF04055 Radical SAM superfamily TBD_RS02425 PF06969 HemN C-terminal domain TBD_RS02435 PF01227 GTP cyclohydrolase I TBD_RS02440 PF00440 Bacterial regulatory proteins, tetR family TBD_RS02440 PF16925 Tetracyclin repressor-like, C-terminal domain TBD_RS02465 PF00563 EAL domain TBD_RS02465 PF03707 Bacterial signalling protein N terminal repeat TBD_RS02465 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS02470 PF01026 TatD related DNase TBD_RS02475 PF01027 Inhibitor of apoptosis-promoting Bax1 TBD_RS02480 PF01145 SPFH domain / Band 7 family TBD_RS02480 PF16200 C-terminal region of band_7 TBD_RS02490 PF03334 Na+/H+ antiporter subunit TBD_RS02495 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) TBD_RS02500 PF01899 Na+/H+ ion antiporter subunit TBD_RS02505 PF00361 Proton-conducting membrane transporter TBD_RS02510 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TBD_RS02515 PF00361 Proton-conducting membrane transporter TBD_RS02515 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TBD_RS02515 PF13244 Domain of unknown function (DUF4040) TBD_RS02515 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter TBD_RS02520 PF00072 Response regulator receiver domain TBD_RS02520 PF02954 Bacterial regulatory protein, Fis family TBD_RS02520 PF00158 Sigma-54 interaction domain TBD_RS02525 PF00924 Mechanosensitive ion channel TBD_RS02530 PF02080 TrkA-C domain TBD_RS02530 PF03471 Transporter associated domain TBD_RS02530 PF00999 Sodium/hydrogen exchanger family TBD_RS02535 PF01699 Sodium/calcium exchanger protein TBD_RS02540 PF00690 Cation transporter/ATPase, N-terminus TBD_RS02540 PF00689 Cation transporting ATPase, C-terminus TBD_RS02545 PF03710 Glutamate-ammonia ligase adenylyltransferase TBD_RS02545 PF08335 GlnD PII-uridylyltransferase TBD_RS02550 PF00501 AMP-binding enzyme TBD_RS02550 PF13193 AMP-binding enzyme C-terminal domain TBD_RS02550 PF16177 Acetyl-coenzyme A synthetase N-terminus TBD_RS02565 PF00082 Subtilase family TBD_RS02570 PF03358 NADPH-dependent FMN reductase TBD_RS02575 PF01479 S4 domain TBD_RS02585 PF00795 Carbon-nitrogen hydrolase TBD_RS02590 PF01523 Putative modulator of DNA gyrase TBD_RS02600 PF00793 DAHP synthetase I family TBD_RS02605 PF12170 DNA polymerase III tau subunit V interacting with alpha TBD_RS02605 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding TBD_RS02605 PF12169 DNA polymerase III subunits gamma and tau domain III TBD_RS02610 PF02575 YbaB/EbfC DNA-binding family TBD_RS02615 PF13662 Toprim domain TBD_RS02615 PF02132 RecR protein TBD_RS02620 PF08328 Adenylosuccinate lyase C-terminal TBD_RS02620 PF00206 Lyase TBD_RS02625 PF00085 Thioredoxin TBD_RS02630 PF03449 Transcription elongation factor, N-terminal TBD_RS02630 PF01272 Transcription elongation factor, GreA/GreB, C-term TBD_RS02640 PF00899 ThiF family TBD_RS02660 PF02441 Flavoprotein TBD_RS02675 PF03668 P-loop ATPase protein family TBD_RS02680 PF07475 HPr Serine kinase C-terminal domain TBD_RS02680 PF02603 HPr Serine kinase N terminus TBD_RS02685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TBD_RS02690 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TBD_RS02695 PF04552 Sigma-54, DNA binding domain TBD_RS02695 PF00309 Sigma-54 factor, Activator interacting domain (AID) TBD_RS02695 PF04963 Sigma-54 factor, core binding domain TBD_RS02700 PF00005 ABC transporter TBD_RS02705 PF03968 OstA-like protein TBD_RS02720 PF01380 SIS domain TBD_RS02720 PF00571 CBS domain TBD_RS02725 PF00999 Sodium/hydrogen exchanger family TBD_RS02725 PF02080 TrkA-C domain TBD_RS02725 PF02254 TrkA-N domain TBD_RS02760 PF00482 Type II secretion system (T2SS), protein F TBD_RS02765 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TBD_RS02765 PF00437 Type II/IV secretion system protein TBD_RS02775 PF00263 Bacterial type II and III secretion system protein TBD_RS02775 PF03958 Bacterial type II/III secretion system short domain TBD_RS02785 PF00072 Response regulator receiver domain TBD_RS02785 PF00158 Sigma-54 interaction domain TBD_RS02785 PF02954 Bacterial regulatory protein, Fis family TBD_RS02795 PF02272 DHHA1 domain TBD_RS02795 PF01411 tRNA synthetases class II (A) TBD_RS02795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TBD_RS02820 PF08406 CbbQ/NirQ/NorQ C-terminal TBD_RS02820 PF07728 AAA domain (dynein-related subfamily) TBD_RS02830 PF00510 Cytochrome c oxidase subunit III TBD_RS02835 PF00115 Cytochrome C and Quinol oxidase polypeptide I TBD_RS02840 PF00034 Cytochrome c TBD_RS02870 PF13181 Tetratricopeptide repeat TBD_RS02870 PF01435 Peptidase family M48 TBD_RS02875 PF01967 MoaC family TBD_RS02880 PF01568 Molydopterin dinucleotide binding domain TBD_RS02880 PF00384 Molybdopterin oxidoreductase TBD_RS02880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TBD_RS02885 PF13247 4Fe-4S dicluster domain TBD_RS02885 PF12800 4Fe-4S binding domain TBD_RS02890 PF04976 DMSO reductase anchor subunit (DmsC) TBD_RS02895 PF00581 Rhodanese-like domain TBD_RS02900 PF01206 Sulfurtransferase TusA TBD_RS02905 PF13686 DsrE/DsrF/DrsH-like family TBD_RS02915 PF10458 Valyl tRNA synthetase tRNA binding arm TBD_RS02915 PF08264 Anticodon-binding domain of tRNA TBD_RS02915 PF00133 tRNA synthetases class I (I, L, M and V) TBD_RS02925 PF04364 DNA polymerase III chi subunit, HolC TBD_RS02930 PF00883 Cytosol aminopeptidase family, catalytic domain TBD_RS02930 PF02789 Cytosol aminopeptidase family, N-terminal domain TBD_RS02945 PF04305 Protein of unknown function (DUF455) TBD_RS02955 PF08007 Cupin superfamily protein TBD_RS02960 PF00578 AhpC/TSA family TBD_RS02965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TBD_RS02970 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TBD_RS02975 PF01171 PP-loop family TBD_RS02975 PF09179 TilS substrate binding domain TBD_RS02975 PF11734 TilS substrate C-terminal domain TBD_RS02980 PF00334 Nucleoside diphosphate kinase TBD_RS02985 PF04055 Radical SAM superfamily TBD_RS02995 PF13464 Domain of unknown function (DUF4115) TBD_RS03000 PF04551 GcpE protein TBD_RS03005 PF03129 Anticodon binding domain TBD_RS03005 PF13393 Histidyl-tRNA synthetase TBD_RS03015 PF13360 PQQ-like domain TBD_RS03020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TBD_RS03020 PF01926 50S ribosome-binding GTPase TBD_RS03040 PF13167 GTP-binding GTPase N-terminal TBD_RS03040 PF01926 50S ribosome-binding GTPase TBD_RS03040 PF16360 GTP-binding GTPase Middle Region TBD_RS03045 PF12221 Bacterial membrane protein N terminal TBD_RS03045 PF01145 SPFH domain / Band 7 family TBD_RS03050 PF01145 SPFH domain / Band 7 family TBD_RS03060 PF13393 Histidyl-tRNA synthetase TBD_RS03065 PF00709 Adenylosuccinate synthetase TBD_RS03075 PF17876 Cold shock domain TBD_RS03075 PF08461 Ribonuclease R winged-helix domain TBD_RS03075 PF08206 Ribonuclease B OB domain TBD_RS03075 PF00773 RNB domain TBD_RS03075 PF00575 S1 RNA binding domain TBD_RS03080 PF08032 RNA 2'-O ribose methyltransferase substrate binding TBD_RS03080 PF00588 SpoU rRNA Methylase family TBD_RS03095 PF18381 YcaO cyclodehydratase C-terminal domain TBD_RS03095 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding TBD_RS03110 PF08032 RNA 2'-O ribose methyltransferase substrate binding TBD_RS03110 PF00588 SpoU rRNA Methylase family TBD_RS03115 PF03707 Bacterial signalling protein N terminal repeat TBD_RS03115 PF00563 EAL domain TBD_RS03115 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS03120 PF03618 Kinase/pyrophosphorylase TBD_RS03125 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TBD_RS03125 PF00391 PEP-utilising enzyme, mobile domain TBD_RS03125 PF02896 PEP-utilising enzyme, TIM barrel domain TBD_RS03130 PF00117 Glutamine amidotransferase class-I TBD_RS03130 PF06418 CTP synthase N-terminus TBD_RS03135 PF00793 DAHP synthetase I family TBD_RS03140 PF00113 Enolase, C-terminal TIM barrel domain TBD_RS03140 PF03952 Enolase, N-terminal domain TBD_RS03145 PF04977 Septum formation initiator TBD_RS03150 PF04354 ZipA, C-terminal FtsZ-binding domain TBD_RS03155 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TBD_RS03155 PF12826 Helix-hairpin-helix motif TBD_RS03155 PF03120 NAD-dependent DNA ligase OB-fold domain TBD_RS03155 PF01653 NAD-dependent DNA ligase adenylation domain TBD_RS03155 PF00533 BRCA1 C Terminus (BRCT) domain TBD_RS03160 PF00483 Nucleotidyl transferase TBD_RS03165 PF01256 Carbohydrate kinase TBD_RS03165 PF03853 YjeF-related protein N-terminus TBD_RS03180 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal TBD_RS03180 PF02769 AIR synthase related protein, C-terminal domain TBD_RS03180 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TBD_RS03185 PF00311 Phosphoenolpyruvate carboxylase TBD_RS03210 PF04055 Radical SAM superfamily TBD_RS03210 PF06969 HemN C-terminal domain TBD_RS03215 PF00072 Response regulator receiver domain TBD_RS03215 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS03230 PF12801 4Fe-4S binding domain TBD_RS03230 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TBD_RS03230 PF13746 4Fe-4S dicluster domain TBD_RS03235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TBD_RS03235 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP TBD_RS03250 PF00115 Cytochrome C and Quinol oxidase polypeptide I TBD_RS03255 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TBD_RS03255 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TBD_RS03265 PF01180 Dihydroorotate dehydrogenase TBD_RS03270 PF00375 Sodium:dicarboxylate symporter family TBD_RS03275 PF00768 D-alanyl-D-alanine carboxypeptidase TBD_RS03275 PF07943 Penicillin-binding protein 5, C-terminal domain TBD_RS03300 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS03300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TBD_RS03310 PF00364 Biotin-requiring enzyme TBD_RS03310 PF02780 Transketolase, C-terminal domain TBD_RS03310 PF02779 Transketolase, pyrimidine binding domain TBD_RS03315 PF00676 Dehydrogenase E1 component TBD_RS03320 PF00883 Cytosol aminopeptidase family, catalytic domain TBD_RS03320 PF02789 Cytosol aminopeptidase family, N-terminal domain TBD_RS03330 PF00849 RNA pseudouridylate synthase TBD_RS03335 PF00080 Copper/zinc superoxide dismutase (SODC) TBD_RS03340 PF00672 HAMP domain TBD_RS03340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TBD_RS03340 PF02203 Tar ligand binding domain homologue TBD_RS03350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TBD_RS03350 PF00205 Thiamine pyrophosphate enzyme, central domain TBD_RS03350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TBD_RS03355 PF02308 MgtC family TBD_RS03365 PF00923 Transaldolase/Fructose-6-phosphate aldolase TBD_RS03370 PF01264 Chorismate synthase TBD_RS03380 PF01168 Alanine racemase, N-terminal domain TBD_RS03385 PF00155 Aminotransferase class I and II TBD_RS03390 PF00072 Response regulator receiver domain TBD_RS03390 PF00196 Bacterial regulatory proteins, luxR family TBD_RS03395 PF00211 Adenylate and Guanylate cyclase catalytic domain TBD_RS03405 PF07690 Major Facilitator Superfamily TBD_RS03415 PF05362 Lon protease (S16) C-terminal proteolytic domain TBD_RS03415 PF13654 AAA domain TBD_RS03430 PF00313 'Cold-shock' DNA-binding domain TBD_RS03435 PF07152 YaeQ protein TBD_RS03450 PF17773 UPF0176 acylphosphatase like domain TBD_RS03450 PF00581 Rhodanese-like domain TBD_RS03460 PF00005 ABC transporter TBD_RS03465 PF13472 GDSL-like Lipase/Acylhydrolase family TBD_RS03495 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TBD_RS03495 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TBD_RS03500 PF13419 Haloacid dehalogenase-like hydrolase TBD_RS03505 PF01258 Prokaryotic dksA/traR C4-type zinc finger TBD_RS03515 PF01138 3' exoribonuclease family, domain 1 TBD_RS03515 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TBD_RS03515 PF03725 3' exoribonuclease family, domain 2 TBD_RS03515 PF00575 S1 RNA binding domain TBD_RS03515 PF00013 KH domain TBD_RS03520 PF00312 Ribosomal protein S15 TBD_RS03525 PF09157 Pseudouridine synthase II TruB, C-terminal TBD_RS03525 PF01509 TruB family pseudouridylate synthase (N terminal domain) TBD_RS03525 PF16198 tRNA pseudouridylate synthase B C-terminal domain TBD_RS03530 PF02033 Ribosome-binding factor A TBD_RS03535 PF00009 Elongation factor Tu GTP binding domain TBD_RS03535 PF11987 Translation-initiation factor 2 TBD_RS03535 PF08364 Bacterial translation initiation factor IF-2 associated region TBD_RS03535 PF04760 Translation initiation factor IF-2, N-terminal region TBD_RS03540 PF08529 NusA N-terminal domain TBD_RS03540 PF13184 NusA-like KH domain TBD_RS03545 PF02576 RimP N-terminal domain TBD_RS03545 PF17384 RimP C-terminal SH3 domain TBD_RS03565 PF01066 CDP-alcohol phosphatidyltransferase TBD_RS03570 PF01541 GIY-YIG catalytic domain TBD_RS03570 PF02151 UvrB/uvrC motif TBD_RS03570 PF08459 UvrC Helix-hairpin-helix N-terminal TBD_RS03575 PF01361 Tautomerase enzyme TBD_RS03580 PF03167 Uracil DNA glycosylase superfamily TBD_RS03585 PF00210 Ferritin-like domain TBD_RS03610 PF04205 FMN-binding domain TBD_RS03620 PF02472 Biopolymer transport protein ExbD/TolR TBD_RS03625 PF01618 MotA/TolQ/ExbB proton channel family TBD_RS03640 PF07715 TonB-dependent Receptor Plug Domain TBD_RS03640 PF00593 TonB dependent receptor TBD_RS03645 PF03328 HpcH/HpaI aldolase/citrate lyase family TBD_RS03650 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TBD_RS03650 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TBD_RS03655 PF06276 Ferric iron reductase FhuF-like transporter TBD_RS03655 PF04183 IucA / IucC family TBD_RS03660 PF07690 Major Facilitator Superfamily TBD_RS03670 PF00206 Lyase TBD_RS03670 PF02655 ATP-grasp domain TBD_RS03675 PF00593 TonB dependent receptor TBD_RS03675 PF07660 Secretin and TonB N terminus short domain TBD_RS03675 PF07715 TonB-dependent Receptor Plug Domain TBD_RS03680 PF03239 Iron permease FTR1 family TBD_RS03695 PF16916 Dimerisation domain of Zinc Transporter TBD_RS03695 PF01545 Cation efflux family TBD_RS03700 PF00933 Glycosyl hydrolase family 3 N terminal domain TBD_RS03705 PF01648 4'-phosphopantetheinyl transferase superfamily TBD_RS03715 PF00158 Sigma-54 interaction domain TBD_RS03715 PF02954 Bacterial regulatory protein, Fis family TBD_RS03725 PF04552 Sigma-54, DNA binding domain TBD_RS03725 PF00309 Sigma-54 factor, Activator interacting domain (AID) TBD_RS03725 PF04963 Sigma-54 factor, core binding domain TBD_RS03760 PF00005 ABC transporter TBD_RS03760 PF00664 ABC transporter transmembrane region TBD_RS03765 PF00534 Glycosyl transferases group 1 TBD_RS03765 PF13439 Glycosyltransferase Family 4 TBD_RS03775 PF01075 Glycosyltransferase family 9 (heptosyltransferase) TBD_RS03800 PF02545 Maf-like protein TBD_RS03800 PF00293 NUDIX domain TBD_RS03810 PF13203 Putative metallopeptidase domain TBD_RS03810 PF09967 VWA-like domain (DUF2201) TBD_RS03815 PF01430 Hsp33 protein TBD_RS03825 PF00437 Type II/IV secretion system protein TBD_RS03825 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TBD_RS03830 PF00482 Type II secretion system (T2SS), protein F TBD_RS03835 PF07963 Prokaryotic N-terminal methylation motif TBD_RS03885 PF03958 Bacterial type II/III secretion system short domain TBD_RS03885 PF00263 Bacterial type II and III secretion system protein TBD_RS03890 PF13401 AAA domain TBD_RS03890 PF01471 Putative peptidoglycan binding domain TBD_RS03905 PF00155 Aminotransferase class I and II TBD_RS03910 PF06167 Glucose-regulated metallo-peptidase M90 TBD_RS03915 PF02646 RmuC family TBD_RS03920 PF03144 Elongation factor Tu domain 2 TBD_RS03920 PF00009 Elongation factor Tu GTP binding domain TBD_RS03920 PF00679 Elongation factor G C-terminus TBD_RS03930 PF01152 Bacterial-like globin TBD_RS03935 PF01370 NAD dependent epimerase/dehydratase family TBD_RS03935 PF02222 ATP-grasp domain TBD_RS03940 PF01510 N-acetylmuramoyl-L-alanine amidase TBD_RS03945 PF00156 Phosphoribosyl transferase domain TBD_RS03950 PF01048 Phosphorylase superfamily TBD_RS03955 PF01479 S4 domain TBD_RS03955 PF00849 RNA pseudouridylate synthase TBD_RS03960 PF01327 Polypeptide deformylase TBD_RS03975 PF08335 GlnD PII-uridylyltransferase TBD_RS03975 PF01909 Nucleotidyltransferase domain TBD_RS03975 PF01966 HD domain TBD_RS03980 PF00557 Metallopeptidase family M24 TBD_RS03985 PF00318 Ribosomal protein S2 TBD_RS03990 PF00889 Elongation factor TS TBD_RS03995 PF00696 Amino acid kinase family TBD_RS04000 PF01765 Ribosome recycling factor TBD_RS04005 PF01255 Putative undecaprenyl diphosphate synthase TBD_RS04015 PF13288 DXP reductoisomerase C-terminal domain TBD_RS04015 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TBD_RS04015 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TBD_RS04020 PF02163 Peptidase family M50 TBD_RS04020 PF17820 PDZ domain TBD_RS04025 PF07244 Surface antigen variable number repeat TBD_RS04025 PF01103 Surface antigen TBD_RS04035 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD TBD_RS04035 PF00132 Bacterial transferase hexapeptide (six repeats) TBD_RS04040 PF07977 FabA-like domain TBD_RS04045 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 TBD_RS04045 PF00132 Bacterial transferase hexapeptide (six repeats) TBD_RS04050 PF02684 Lipid-A-disaccharide synthetase TBD_RS04055 PF01351 Ribonuclease HII TBD_RS04085 PF00549 CoA-ligase TBD_RS04085 PF08442 ATP-grasp domain TBD_RS04090 PF02629 CoA binding domain TBD_RS04090 PF00549 CoA-ligase TBD_RS04095 PF00795 Carbon-nitrogen hydrolase TBD_RS04095 PF02540 NAD synthase TBD_RS04100 PF00543 Nitrogen regulatory protein P-II TBD_RS04105 PF13525 Outer membrane lipoprotein TBD_RS04110 PF00849 RNA pseudouridylate synthase TBD_RS04115 PF02578 Multi-copper polyphenol oxidoreductase laccase TBD_RS04125 PF00583 Acetyltransferase (GNAT) family TBD_RS04130 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TBD_RS04130 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TBD_RS04135 PF10431 C-terminal, D2-small domain, of ClpB protein TBD_RS04135 PF17871 AAA lid domain TBD_RS04135 PF02861 Clp amino terminal domain, pathogenicity island component TBD_RS04135 PF07724 AAA domain (Cdc48 subfamily) TBD_RS04135 PF00004 ATPase family associated with various cellular activities (AAA) TBD_RS04155 PF06532 Negative regulator of sigma F TBD_RS04165 PF00034 Cytochrome c TBD_RS04170 PF00115 Cytochrome C and Quinol oxidase polypeptide I TBD_RS04175 PF07728 AAA domain (dynein-related subfamily) TBD_RS04175 PF08406 CbbQ/NirQ/NorQ C-terminal TBD_RS04180 PF00092 von Willebrand factor type A domain TBD_RS04195 PF14579 Helix-hairpin-helix motif TBD_RS04195 PF01336 OB-fold nucleic acid binding domain TBD_RS04195 PF02811 PHP domain TBD_RS04195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TBD_RS04195 PF07733 Bacterial DNA polymerase III alpha NTPase domain TBD_RS04210 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase TBD_RS04210 PF09364 XFP N-terminal domain TBD_RS04210 PF09363 XFP C-terminal domain TBD_RS04215 PF00871 Acetokinase family TBD_RS04230 PF01975 Survival protein SurE TBD_RS04240 PF01476 LysM domain TBD_RS04240 PF01551 Peptidase family M23 TBD_RS04245 PF00140 Sigma-70 factor, region 1.2 TBD_RS04245 PF04542 Sigma-70 region 2 TBD_RS04245 PF04539 Sigma-70 region 3 TBD_RS04245 PF04545 Sigma-70, region 4 TBD_RS04250 PF13419 Haloacid dehalogenase-like hydrolase TBD_RS04265 PF00155 Aminotransferase class I and II TBD_RS04270 PF00742 Homoserine dehydrogenase TBD_RS04270 PF01842 ACT domain TBD_RS04270 PF03447 Homoserine dehydrogenase, NAD binding domain TBD_RS04275 PF00291 Pyridoxal-phosphate dependent enzyme TBD_RS04275 PF14821 Threonine synthase N terminus TBD_RS04280 PF03167 Uracil DNA glycosylase superfamily TBD_RS04285 PF00043 Glutathione S-transferase, C-terminal domain TBD_RS04285 PF13417 Glutathione S-transferase, N-terminal domain TBD_RS04290 PF01625 Peptide methionine sulfoxide reductase TBD_RS04305 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain TBD_RS04305 PF00749 tRNA synthetases class I (E and Q), catalytic domain TBD_RS04315 PF00293 NUDIX domain TBD_RS04320 PF00849 RNA pseudouridylate synthase TBD_RS04325 PF00180 Isocitrate/isopropylmalate dehydrogenase TBD_RS04330 PF00313 'Cold-shock' DNA-binding domain TBD_RS04340 PF01132 Elongation factor P (EF-P) OB domain TBD_RS04340 PF08207 Elongation factor P (EF-P) KOW-like domain TBD_RS04340 PF09285 Elongation factor P, C-terminal TBD_RS04345 PF14579 Helix-hairpin-helix motif TBD_RS04345 PF02811 PHP domain TBD_RS04345 PF01336 OB-fold nucleic acid binding domain TBD_RS04345 PF07733 Bacterial DNA polymerase III alpha NTPase domain TBD_RS04345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TBD_RS04350 PF00708 Acylphosphatase TBD_RS04355 PF01588 Putative tRNA binding domain TBD_RS04355 PF09334 tRNA synthetases class I (M) TBD_RS04375 PF00348 Polyprenyl synthetase TBD_RS04380 PF00829 Ribosomal prokaryotic L21 protein TBD_RS04385 PF01016 Ribosomal L27 protein TBD_RS04390 PF01926 50S ribosome-binding GTPase TBD_RS04390 PF01018 GTP1/OBG TBD_RS04405 PF08406 CbbQ/NirQ/NorQ C-terminal TBD_RS04405 PF07728 AAA domain (dynein-related subfamily) TBD_RS04420 PF00890 FAD binding domain TBD_RS04425 PF13187 4Fe-4S dicluster domain TBD_RS04425 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit TBD_RS04430 PF14306 PUA-like domain TBD_RS04430 PF01747 ATP-sulfurylase TBD_RS04440 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TBD_RS04440 PF00117 Glutamine amidotransferase class-I TBD_RS04450 PF02649 Type I GTP cyclohydrolase folE2 TBD_RS04455 PF02780 Transketolase, C-terminal domain TBD_RS04455 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TBD_RS04455 PF02779 Transketolase, pyrimidine binding domain TBD_RS04460 PF00348 Polyprenyl synthetase TBD_RS04465 PF02609 Exonuclease VII small subunit TBD_RS04495 PF00561 alpha/beta hydrolase fold TBD_RS04515 PF00694 Aconitase C-terminal domain TBD_RS04515 PF00330 Aconitase family (aconitate hydratase) TBD_RS04525 PF00152 tRNA synthetases class II (D, K and N) TBD_RS04525 PF01336 OB-fold nucleic acid binding domain TBD_RS04540 PF09382 RQC domain TBD_RS04540 PF16124 RecQ zinc-binding TBD_RS04540 PF00570 HRDC domain TBD_RS04540 PF00270 DEAD/DEAH box helicase TBD_RS04540 PF00271 Helicase conserved C-terminal domain TBD_RS04555 PF17432 Domain of unknown function (DUF3458_C) ARM repeats TBD_RS04555 PF11940 Domain of unknown function (DUF3458) Ig-like fold TBD_RS04555 PF01433 Peptidase family M1 domain TBD_RS04570 PF00873 AcrB/AcrD/AcrF family TBD_RS04575 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS04575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS04575 PF00989 PAS fold TBD_RS04580 PF00072 Response regulator receiver domain TBD_RS04580 PF02954 Bacterial regulatory protein, Fis family TBD_RS04580 PF00158 Sigma-54 interaction domain TBD_RS04590 PF00080 Copper/zinc superoxide dismutase (SODC) TBD_RS04605 PF07715 TonB-dependent Receptor Plug Domain TBD_RS04605 PF00593 TonB dependent receptor TBD_RS04615 PF01618 MotA/TolQ/ExbB proton channel family TBD_RS04620 PF02472 Biopolymer transport protein ExbD/TolR TBD_RS04665 PF03462 PCRF domain TBD_RS04665 PF00472 RF-1 domain TBD_RS04670 PF13194 Domain of unknown function (DUF4010) TBD_RS04690 PF13276 HTH-like domain TBD_RS04690 PF00665 Integrase core domain TBD_RS04690 PF13333 Integrase core domain TBD_RS04715 PF00176 SNF2 family N-terminal domain TBD_RS04715 PF00271 Helicase conserved C-terminal domain TBD_RS04730 PF01555 DNA methylase TBD_RS04745 PF13356 Arm DNA-binding domain TBD_RS04745 PF00589 Phage integrase family TBD_RS04755 PF13419 Haloacid dehalogenase-like hydrolase TBD_RS04765 PF01979 Amidohydrolase family TBD_RS04770 PF03989 DNA gyrase C-terminal domain, beta-propeller TBD_RS04770 PF00521 DNA gyrase/topoisomerase IV, subunit A TBD_RS04775 PF00266 Aminotransferase class-V TBD_RS04780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TBD_RS04780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TBD_RS04780 PF01842 ACT domain TBD_RS04785 PF00800 Prephenate dehydratase TBD_RS04785 PF01817 Chorismate mutase type II TBD_RS04785 PF01842 ACT domain TBD_RS04790 PF00155 Aminotransferase class I and II TBD_RS04795 PF02153 Prephenate dehydrogenase TBD_RS04800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TBD_RS04805 PF02224 Cytidylate kinase TBD_RS04810 PF00575 S1 RNA binding domain TBD_RS04815 PF00216 Bacterial DNA-binding protein TBD_RS04825 PF18073 Rubredoxin metal binding domain TBD_RS04830 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TBD_RS04835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TBD_RS04835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TBD_RS04835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TBD_RS04840 PF00294 pfkB family carbohydrate kinase TBD_RS04845 PF01370 NAD dependent epimerase/dehydratase family TBD_RS04850 PF00291 Pyridoxal-phosphate dependent enzyme TBD_RS04855 PF18073 Rubredoxin metal binding domain TBD_RS04870 PF16658 Class II release factor RF3, C-terminal domain TBD_RS04870 PF03144 Elongation factor Tu domain 2 TBD_RS04870 PF00009 Elongation factor Tu GTP binding domain TBD_RS04885 PF00696 Amino acid kinase family TBD_RS04885 PF01842 ACT domain TBD_RS04885 PF13840 ACT domain TBD_RS04890 PF01938 TRAM domain TBD_RS04890 PF05958 tRNA (Uracil-5-)-methyltransferase TBD_RS04910 PF00342 Phosphoglucose isomerase TBD_RS04915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TBD_RS04950 PF01435 Peptidase family M48 TBD_RS04955 PF00211 Adenylate and Guanylate cyclase catalytic domain TBD_RS04960 PF12706 Beta-lactamase superfamily domain TBD_RS04975 PF00072 Response regulator receiver domain TBD_RS04975 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TBD_RS04975 PF01627 Hpt domain TBD_RS04975 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS04975 PF00672 HAMP domain TBD_RS04975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS04980 PF08402 TOBE domain TBD_RS04980 PF00005 ABC transporter TBD_RS05000 PF00877 NlpC/P60 family TBD_RS05010 PF03109 ABC1 family TBD_RS05015 PF00563 EAL domain TBD_RS05015 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS05015 PF08448 PAS fold TBD_RS05025 PF04851 Type III restriction enzyme, res subunit TBD_RS05025 PF13307 Helicase C-terminal domain TBD_RS05030 PF00578 AhpC/TSA family TBD_RS05035 PF01713 Smr domain TBD_RS05040 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS05045 PF01580 FtsK/SpoIIIE family TBD_RS05045 PF13491 4TM region of DNA translocase FtsK/SpoIIIE TBD_RS05045 PF17854 FtsK alpha domain TBD_RS05045 PF09397 Ftsk gamma domain TBD_RS05050 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TBD_RS05055 PF02542 YgbB family TBD_RS05075 PF02824 TGS domain TBD_RS05075 PF03129 Anticodon binding domain TBD_RS05075 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TBD_RS05075 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TBD_RS05080 PF05198 Translation initiation factor IF-3, N-terminal domain TBD_RS05080 PF00707 Translation initiation factor IF-3, C-terminal domain TBD_RS05085 PF01632 Ribosomal protein L35 TBD_RS05090 PF00453 Ribosomal protein L20 TBD_RS05095 PF01409 tRNA synthetases class II core domain (F) TBD_RS05095 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TBD_RS05100 PF01588 Putative tRNA binding domain TBD_RS05100 PF03147 Ferredoxin-fold anticodon binding domain TBD_RS05100 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TBD_RS05100 PF03483 B3/4 domain TBD_RS05100 PF03484 tRNA synthetase B5 domain TBD_RS05105 PF00216 Bacterial DNA-binding protein TBD_RS05120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TBD_RS05120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TBD_RS05140 PF02696 Uncharacterized ACR, YdiU/UPF0061 family TBD_RS05145 PF10017 Histidine-specific methyltransferase, SAM-dependent TBD_RS05150 PF00586 AIR synthase related protein, N-terminal domain TBD_RS05150 PF02769 AIR synthase related protein, C-terminal domain TBD_RS05160 PF06463 Molybdenum Cofactor Synthesis C TBD_RS05160 PF04055 Radical SAM superfamily TBD_RS05165 PF03205 Molybdopterin guanine dinucleotide synthesis protein B TBD_RS05170 PF03454 MoeA C-terminal region (domain IV) TBD_RS05170 PF03453 MoeA N-terminal region (domain I and II) TBD_RS05170 PF00994 Probable molybdopterin binding domain TBD_RS05180 PF02391 MoaE protein TBD_RS05190 PF01292 Prokaryotic cytochrome b561 TBD_RS05210 PF12392 Collagenase TBD_RS05210 PF01136 Peptidase family U32 TBD_RS05215 PF03459 TOBE domain TBD_RS05215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TBD_RS05225 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TBD_RS05240 PF00563 EAL domain TBD_RS05240 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS05240 PF00072 Response regulator receiver domain TBD_RS05255 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS05255 PF03707 Bacterial signalling protein N terminal repeat TBD_RS05255 PF00563 EAL domain TBD_RS05265 PF17113 Regulatory signalling modulator protein AmpE TBD_RS05265 PF03186 CobD/Cbib protein TBD_RS05270 PF07670 Nucleoside recognition TBD_RS05275 PF02541 Ppx/GppA phosphatase family TBD_RS05300 PF13396 Phospholipase_D-nuclease N-terminal TBD_RS05300 PF13091 PLD-like domain TBD_RS05325 PF07681 DoxX TBD_RS05340 PF13847 Methyltransferase domain TBD_RS05350 PF00989 PAS fold TBD_RS05350 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS05350 PF01590 GAF domain TBD_RS05350 PF00563 EAL domain TBD_RS05395 PF07731 Multicopper oxidase TBD_RS05395 PF00394 Multicopper oxidase TBD_RS05395 PF07732 Multicopper oxidase TBD_RS05410 PF13847 Methyltransferase domain TBD_RS05425 PF00183 Hsp90 protein TBD_RS05425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS05435 PF13439 Glycosyltransferase Family 4 TBD_RS05435 PF00534 Glycosyl transferases group 1 TBD_RS05450 PF00005 ABC transporter TBD_RS05460 PF02503 Polyphosphate kinase middle domain TBD_RS05460 PF13090 Polyphosphate kinase C-terminal domain 2 TBD_RS05460 PF17941 Polyphosphate kinase C-terminal domain 1 TBD_RS05460 PF13089 Polyphosphate kinase N-terminal domain TBD_RS05470 PF00300 Histidine phosphatase superfamily (branch 1) TBD_RS05480 PF14842 FliG N-terminal domain TBD_RS05480 PF14841 FliG middle domain TBD_RS05480 PF01706 FliG C-terminal domain TBD_RS05490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TBD_RS05490 PF18269 T3SS EscN ATPase C-terminal domain TBD_RS05505 PF04347 Flagellar biosynthesis protein, FliO TBD_RS05510 PF00813 FliP family TBD_RS05515 PF01313 Bacterial export proteins, family 3 TBD_RS05520 PF01311 Bacterial export proteins, family 1 TBD_RS05525 PF00701 Dihydrodipicolinate synthetase family TBD_RS05530 PF06804 NlpB/DapX lipoprotein TBD_RS05535 PF00753 Metallo-beta-lactamase superfamily TBD_RS05540 PF00270 DEAD/DEAH box helicase TBD_RS05540 PF00271 Helicase conserved C-terminal domain TBD_RS05550 PF16123 Hydroxyacylglutathione hydrolase C-terminus TBD_RS05550 PF00753 Metallo-beta-lactamase superfamily TBD_RS05555 PF00042 Globin TBD_RS05555 PF00175 Oxidoreductase NAD-binding domain TBD_RS05555 PF00970 Oxidoreductase FAD-binding domain TBD_RS05560 PF01641 SelR domain TBD_RS05570 PF02754 Cysteine-rich domain TBD_RS05570 PF13183 4Fe-4S dicluster domain TBD_RS05595 PF05726 Pirin C-terminal cupin domain TBD_RS05595 PF02678 Pirin TBD_RS05605 PF16916 Dimerisation domain of Zinc Transporter TBD_RS05605 PF01545 Cation efflux family TBD_RS05610 PF03458 UPF0126 domain TBD_RS05615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TBD_RS05615 PF03466 LysR substrate binding domain TBD_RS05620 PF02525 Flavodoxin-like fold TBD_RS05625 PF05726 Pirin C-terminal cupin domain TBD_RS05625 PF02678 Pirin TBD_RS05635 PF01472 PUA domain TBD_RS05635 PF00696 Amino acid kinase family TBD_RS05640 PF00300 Histidine phosphatase superfamily (branch 1) TBD_RS05645 PF01497 Periplasmic binding protein TBD_RS05650 PF01475 Ferric uptake regulator family TBD_RS05655 PF04355 SmpA / OmlA family TBD_RS05660 PF05173 Dihydrodipicolinate reductase, C-terminus TBD_RS05660 PF01113 Dihydrodipicolinate reductase, N-terminus TBD_RS05665 PF00462 Glutaredoxin TBD_RS05670 PF00117 Glutamine amidotransferase class-I TBD_RS05670 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TBD_RS05675 PF02142 MGS-like domain TBD_RS05675 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TBD_RS05675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TBD_RS05680 PF01272 Transcription elongation factor, GreA/GreB, C-term TBD_RS05680 PF03449 Transcription elongation factor, N-terminal TBD_RS05690 PF01985 CRS1 / YhbY (CRM) domain TBD_RS05695 PF01728 FtsJ-like methyltransferase TBD_RS05700 PF06480 FtsH Extracellular TBD_RS05700 PF17862 AAA+ lid domain TBD_RS05700 PF01434 Peptidase family M41 TBD_RS05700 PF00004 ATPase family associated with various cellular activities (AAA) TBD_RS05705 PF00809 Pterin binding enzyme TBD_RS05710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TBD_RS05710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TBD_RS05710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TBD_RS05710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TBD_RS05715 PF12849 PBP superfamily domain TBD_RS05720 PF00528 Binding-protein-dependent transport system inner membrane component TBD_RS05725 PF00528 Binding-protein-dependent transport system inner membrane component TBD_RS05730 PF00005 ABC transporter TBD_RS05735 PF00121 Triosephosphate isomerase TBD_RS05740 PF03840 Preprotein translocase SecG subunit TBD_RS05750 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TBD_RS05755 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TBD_RS05760 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TBD_RS05765 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TBD_RS05775 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TBD_RS05775 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TBD_RS05775 PF10531 SLBB domain TBD_RS05780 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TBD_RS05780 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal TBD_RS05780 PF00384 Molybdopterin oxidoreductase TBD_RS05785 PF00146 NADH dehydrogenase TBD_RS05790 PF12838 4Fe-4S dicluster domain TBD_RS05795 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TBD_RS05800 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TBD_RS05805 PF00361 Proton-conducting membrane transporter TBD_RS05805 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TBD_RS05810 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus TBD_RS05810 PF00361 Proton-conducting membrane transporter TBD_RS05815 PF00361 Proton-conducting membrane transporter TBD_RS05835 PF05192 MutS domain III TBD_RS05835 PF05190 MutS family domain IV TBD_RS05835 PF01624 MutS domain I TBD_RS05835 PF00488 MutS domain V TBD_RS05835 PF05188 MutS domain II TBD_RS05840 PF00459 Inositol monophosphatase family TBD_RS05845 PF00588 SpoU rRNA Methylase family TBD_RS05850 PF00132 Bacterial transferase hexapeptide (six repeats) TBD_RS05855 PF02082 Transcriptional regulator TBD_RS05860 PF00266 Aminotransferase class-V TBD_RS05865 PF01592 NifU-like N terminal domain TBD_RS05870 PF01521 Iron-sulphur cluster biosynthesis TBD_RS05875 PF07743 HSCB C-terminal oligomerisation domain TBD_RS05880 PF00012 Hsp70 protein TBD_RS05885 PF00111 2Fe-2S iron-sulfur cluster binding domain TBD_RS05890 PF04384 Iron-sulphur cluster assembly TBD_RS05900 PF00128 Alpha amylase, catalytic domain TBD_RS05900 PF16657 Maltogenic Amylase, C-terminal domain TBD_RS05905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TBD_RS05905 PF00128 Alpha amylase, catalytic domain TBD_RS05905 PF11941 Domain of unknown function (DUF3459) TBD_RS05910 PF02446 4-alpha-glucanotransferase TBD_RS05915 PF00483 Nucleotidyl transferase TBD_RS05925 PF00771 FHIPEP family TBD_RS05930 PF00448 SRP54-type protein, GTPase domain TBD_RS05940 PF04545 Sigma-70, region 4 TBD_RS05940 PF04539 Sigma-70 region 3 TBD_RS05940 PF04542 Sigma-70 region 2 TBD_RS05945 PF03949 Malic enzyme, NAD binding domain TBD_RS05945 PF00390 Malic enzyme, N-terminal domain TBD_RS05955 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TBD_RS05960 PF00890 FAD binding domain TBD_RS05960 PF02910 Fumarate reductase flavoprotein C-term TBD_RS05965 PF13085 2Fe-2S iron-sulfur cluster binding domain TBD_RS05975 PF00285 Citrate synthase, C-terminal domain TBD_RS05980 PF00676 Dehydrogenase E1 component TBD_RS05980 PF16078 2-oxoglutarate dehydrogenase N-terminus TBD_RS05980 PF02779 Transketolase, pyrimidine binding domain TBD_RS05980 PF16870 2-oxoglutarate dehydrogenase C-terminal TBD_RS05985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TBD_RS05985 PF02817 e3 binding domain TBD_RS05985 PF00364 Biotin-requiring enzyme TBD_RS05990 PF00005 ABC transporter TBD_RS05995 PF00563 EAL domain TBD_RS05995 PF03707 Bacterial signalling protein N terminal repeat TBD_RS05995 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS06000 PF00072 Response regulator receiver domain TBD_RS06005 PF00989 PAS fold TBD_RS06005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS06005 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS06015 PF01661 Macro domain TBD_RS06040 PF00248 Aldo/keto reductase family TBD_RS06100 PF00589 Phage integrase family TBD_RS06100 PF13495 Phage integrase, N-terminal SAM-like domain TBD_RS06105 PF14437 MafB19-like deaminase TBD_RS06120 PF01435 Peptidase family M48 TBD_RS06125 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal TBD_RS06125 PF14602 Hexapeptide repeat of succinyl-transferase TBD_RS06125 PF00132 Bacterial transferase hexapeptide (six repeats) TBD_RS06130 PF00155 Aminotransferase class I and II TBD_RS06135 PF00892 EamA-like transporter family TBD_RS06155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TBD_RS06160 PF14489 QueF-like protein TBD_RS06165 PF02463 RecF/RecN/SMC N terminal domain TBD_RS06165 PF06470 SMC proteins Flexible Hinge Domain TBD_RS06170 PF02403 Seryl-tRNA synthetase N-terminal domain TBD_RS06170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TBD_RS06175 PF00497 Bacterial extracellular solute-binding proteins, family 3 TBD_RS06175 PF01464 Transglycosylase SLT domain TBD_RS06185 PF06798 PrkA serine protein kinase C-terminal domain TBD_RS06185 PF08298 PrkA AAA domain TBD_RS06190 PF04285 Protein of unknown function (DUF444) TBD_RS06195 PF04293 SpoVR like protein TBD_RS06200 PF00355 Rieske [2Fe-2S] domain TBD_RS06205 PF02617 ATP-dependent Clp protease adaptor protein ClpS TBD_RS06210 PF02861 Clp amino terminal domain, pathogenicity island component TBD_RS06210 PF07724 AAA domain (Cdc48 subfamily) TBD_RS06210 PF17871 AAA lid domain TBD_RS06210 PF10431 C-terminal, D2-small domain, of ClpB protein TBD_RS06210 PF00004 ATPase family associated with various cellular activities (AAA) TBD_RS06220 PF01050 Mannose-6-phosphate isomerase TBD_RS06220 PF00483 Nucleotidyl transferase TBD_RS06225 PF05247 Flagellar transcriptional activator (FlhD) TBD_RS06230 PF05280 Flagellar transcriptional activator (FlhC) TBD_RS06240 PF01618 MotA/TolQ/ExbB proton channel family TBD_RS06245 PF13677 Membrane MotB of proton-channel complex MotA/MotB TBD_RS06245 PF00691 OmpA family TBD_RS06250 PF01312 FlhB HrpN YscU SpaS Family TBD_RS06255 PF00771 FHIPEP family TBD_RS06260 PF00448 SRP54-type protein, GTPase domain TBD_RS06265 PF10609 NUBPL iron-transfer P-loop NTPase TBD_RS06270 PF04542 Sigma-70 region 2 TBD_RS06270 PF04545 Sigma-70, region 4 TBD_RS06270 PF04539 Sigma-70 region 3 TBD_RS06275 PF01618 MotA/TolQ/ExbB proton channel family TBD_RS06280 PF13677 Membrane MotB of proton-channel complex MotA/MotB TBD_RS06280 PF00691 OmpA family TBD_RS06285 PF05362 Lon protease (S16) C-terminal proteolytic domain TBD_RS06285 PF00004 ATPase family associated with various cellular activities (AAA) TBD_RS06285 PF02190 ATP-dependent protease La (LON) substrate-binding domain TBD_RS06290 PF13686 DsrE/DsrF/DrsH-like family TBD_RS06295 PF01206 Sulfurtransferase TusA TBD_RS06305 PF02616 Segregation and condensation protein ScpA TBD_RS06310 PF04079 Segregation and condensation complex subunit ScpB TBD_RS06315 PF00849 RNA pseudouridylate synthase TBD_RS06315 PF01479 S4 domain TBD_RS06330 PF00175 Oxidoreductase NAD-binding domain TBD_RS06330 PF00042 Globin TBD_RS06330 PF00970 Oxidoreductase FAD-binding domain TBD_RS06355 PF00593 TonB dependent receptor TBD_RS06355 PF07715 TonB-dependent Receptor Plug Domain TBD_RS06365 PF00672 HAMP domain TBD_RS06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS06365 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS06365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TBD_RS06365 PF01627 Hpt domain TBD_RS06365 PF00072 Response regulator receiver domain TBD_RS06370 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS06370 PF03707 Bacterial signalling protein N terminal repeat TBD_RS06370 PF00563 EAL domain TBD_RS06375 PF05175 Methyltransferase small domain TBD_RS06380 PF01546 Peptidase family M20/M25/M40 TBD_RS06380 PF07687 Peptidase dimerisation domain TBD_RS06390 PF00005 ABC transporter TBD_RS06390 PF00664 ABC transporter transmembrane region TBD_RS06405 PF01593 Flavin containing amine oxidoreductase TBD_RS06425 PF00266 Aminotransferase class-V TBD_RS06430 PF03781 Sulfatase-modifying factor enzyme 1 TBD_RS06430 PF12867 DinB superfamily TBD_RS06435 PF00581 Rhodanese-like domain TBD_RS06435 PF00753 Metallo-beta-lactamase superfamily TBD_RS06445 PF00528 Binding-protein-dependent transport system inner membrane component TBD_RS06450 PF00005 ABC transporter TBD_RS06450 PF03459 TOBE domain TBD_RS06460 PF00072 Response regulator receiver domain TBD_RS06460 PF00486 Transcriptional regulatory protein, C terminal TBD_RS06465 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS06465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS06465 PF00672 HAMP domain TBD_RS06475 PF00196 Bacterial regulatory proteins, luxR family TBD_RS06475 PF00072 Response regulator receiver domain TBD_RS06485 PF00149 Calcineurin-like phosphoesterase TBD_RS06485 PF02872 5'-nucleotidase, C-terminal domain TBD_RS06490 PF07963 Prokaryotic N-terminal methylation motif TBD_RS06490 PF08334 Type II secretion system (T2SS), protein G TBD_RS06495 PF00482 Type II secretion system (T2SS), protein F TBD_RS06500 PF00437 Type II/IV secretion system protein TBD_RS06500 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TBD_RS06525 PF03958 Bacterial type II/III secretion system short domain TBD_RS06525 PF00263 Bacterial type II and III secretion system protein TBD_RS06530 PF07963 Prokaryotic N-terminal methylation motif TBD_RS06530 PF08334 Type II secretion system (T2SS), protein G TBD_RS06535 PF07963 Prokaryotic N-terminal methylation motif TBD_RS06535 PF00114 Pilin (bacterial filament) TBD_RS06545 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain TBD_RS06545 PF06165 Glycosyltransferase family 36 TBD_RS06545 PF10091 Putative glucoamylase TBD_RS06550 PF12146 Serine aminopeptidase, S33 TBD_RS06555 PF00580 UvrD/REP helicase N-terminal domain TBD_RS06555 PF13361 UvrD-like helicase C-terminal domain TBD_RS06570 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TBD_RS06570 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TBD_RS06575 PF04349 Periplasmic glucan biosynthesis protein, MdoG TBD_RS06580 PF00535 Glycosyl transferase family 2 TBD_RS06625 PF00394 Multicopper oxidase TBD_RS06625 PF07731 Multicopper oxidase TBD_RS06625 PF07732 Multicopper oxidase TBD_RS06630 PF05275 Copper resistance protein B precursor (CopB) TBD_RS06640 PF00873 AcrB/AcrD/AcrF family TBD_RS06645 PF00529 HlyD membrane-fusion protein of T1SS TBD_RS06645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TBD_RS06650 PF02321 Outer membrane efflux protein TBD_RS06665 PF00873 AcrB/AcrD/AcrF family TBD_RS06670 PF00529 HlyD membrane-fusion protein of T1SS TBD_RS06670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TBD_RS06690 PF09278 MerR, DNA binding TBD_RS06690 PF00376 MerR family regulatory protein TBD_RS06695 PF02411 MerT mercuric transport protein TBD_RS06700 PF00403 Heavy-metal-associated domain TBD_RS06705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TBD_RS06705 PF00403 Heavy-metal-associated domain TBD_RS06705 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS06765 PF02321 Outer membrane efflux protein TBD_RS06780 PF00005 ABC transporter TBD_RS06780 PF02687 FtsX-like permease family TBD_RS06780 PF12704 MacB-like periplasmic core domain TBD_RS06790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TBD_RS06800 PF01926 50S ribosome-binding GTPase TBD_RS06800 PF13167 GTP-binding GTPase N-terminal TBD_RS06800 PF16360 GTP-binding GTPase Middle Region TBD_RS06830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TBD_RS06830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TBD_RS06835 PF00011 Hsp20/alpha crystallin family TBD_RS06855 PF04955 HupE / UreJ protein TBD_RS06860 PF00374 Nickel-dependent hydrogenase TBD_RS06875 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal TBD_RS06875 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TBD_RS06885 PF01750 Hydrogenase maturation protease TBD_RS06890 PF01455 HupF/HypC family TBD_RS06895 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TBD_RS06900 PF02492 CobW/HypB/UreG, nucleotide-binding domain TBD_RS06905 PF01924 Hydrogenase formation hypA family TBD_RS06910 PF00708 Acylphosphatase TBD_RS06910 PF17788 HypF Kae1-like domain TBD_RS06910 PF01300 Telomere recombination TBD_RS06910 PF07503 HypF finger TBD_RS06915 PF00586 AIR synthase related protein, N-terminal domain TBD_RS06915 PF02769 AIR synthase related protein, C-terminal domain TBD_RS06925 PF00571 CBS domain TBD_RS06930 PF18764 Nitrous oxide reductase propeller repeat TBD_RS06930 PF18793 Nitrous oxide reductase propeller repeat 2 TBD_RS06930 PF13473 Cupredoxin-like domain TBD_RS06935 PF12801 4Fe-4S binding domain TBD_RS06935 PF04205 FMN-binding domain TBD_RS06940 PF05048 Periplasmic copper-binding protein (NosD) TBD_RS06945 PF00005 ABC transporter TBD_RS06950 PF12679 ABC-2 family transporter protein TBD_RS06980 PF00196 Bacterial regulatory proteins, luxR family TBD_RS06980 PF00072 Response regulator receiver domain TBD_RS06985 PF07730 Histidine kinase TBD_RS06985 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term TBD_RS06985 PF00672 HAMP domain TBD_RS06985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS06990 PF07690 Major Facilitator Superfamily TBD_RS06995 PF07690 Major Facilitator Superfamily TBD_RS07000 PF01568 Molydopterin dinucleotide binding domain TBD_RS07000 PF14710 Respiratory nitrate reductase alpha N-terminal TBD_RS07000 PF00384 Molybdopterin oxidoreductase TBD_RS07005 PF13247 4Fe-4S dicluster domain TBD_RS07005 PF14711 Respiratory nitrate reductase beta C-terminal TBD_RS07010 PF02613 Nitrate reductase delta subunit TBD_RS07015 PF02665 Nitrate reductase gamma subunit TBD_RS07020 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS07025 PF04358 DsrC like protein TBD_RS07040 PF03707 Bacterial signalling protein N terminal repeat TBD_RS07040 PF00563 EAL domain TBD_RS07040 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS07045 PF00005 ABC transporter TBD_RS07045 PF02687 FtsX-like permease family TBD_RS07045 PF12704 MacB-like periplasmic core domain TBD_RS07050 PF00005 ABC transporter TBD_RS07050 PF02687 FtsX-like permease family TBD_RS07050 PF12704 MacB-like periplasmic core domain TBD_RS07060 PF02321 Outer membrane efflux protein TBD_RS07065 PF02321 Outer membrane efflux protein TBD_RS07070 PF00873 AcrB/AcrD/AcrF family TBD_RS07075 PF00529 HlyD membrane-fusion protein of T1SS TBD_RS07075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TBD_RS07085 PF12849 PBP superfamily domain TBD_RS07110 PF01451 Low molecular weight phosphotyrosine protein phosphatase TBD_RS07115 PF01758 Sodium Bile acid symporter family TBD_RS07130 PF13847 Methyltransferase domain TBD_RS07145 PF00226 DnaJ domain TBD_RS07145 PF01556 DnaJ C terminal domain TBD_RS07150 PF08334 Type II secretion system (T2SS), protein G TBD_RS07150 PF07963 Prokaryotic N-terminal methylation motif TBD_RS07155 PF00482 Type II secretion system (T2SS), protein F TBD_RS07160 PF00437 Type II/IV secretion system protein TBD_RS07185 PF11741 AMIN domain TBD_RS07185 PF00263 Bacterial type II and III secretion system protein TBD_RS07185 PF03958 Bacterial type II/III secretion system short domain TBD_RS07185 PF07660 Secretin and TonB N terminus short domain TBD_RS07190 PF07963 Prokaryotic N-terminal methylation motif TBD_RS07190 PF00114 Pilin (bacterial filament) TBD_RS07195 PF08334 Type II secretion system (T2SS), protein G TBD_RS07195 PF07963 Prokaryotic N-terminal methylation motif TBD_RS07215 PF00011 Hsp20/alpha crystallin family TBD_RS07220 PF14716 Helix-hairpin-helix domain TBD_RS07220 PF14791 DNA polymerase beta thumb TBD_RS07220 PF02811 PHP domain TBD_RS07250 PF01820 D-ala D-ala ligase N-terminus TBD_RS07250 PF07478 D-ala D-ala ligase C-terminus TBD_RS07265 PF00563 EAL domain TBD_RS07265 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS07265 PF03707 Bacterial signalling protein N terminal repeat TBD_RS07295 PF00924 Mechanosensitive ion channel TBD_RS07300 PF01176 Translation initiation factor 1A / IF-1 TBD_RS07305 PF09587 Bacterial capsule synthesis protein PGA_cap TBD_RS07310 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TBD_RS07310 PF14572 Phosphoribosyl synthetase-associated domain TBD_RS07330 PF00106 short chain dehydrogenase TBD_RS07340 PF16363 GDP-mannose 4,6 dehydratase TBD_RS07345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TBD_RS07345 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS07355 PF13091 PLD-like domain TBD_RS07360 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS07360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TBD_RS07385 PF03707 Bacterial signalling protein N terminal repeat TBD_RS07385 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS07385 PF00563 EAL domain TBD_RS07390 PF03167 Uracil DNA glycosylase superfamily TBD_RS07395 PF01066 CDP-alcohol phosphatidyltransferase TBD_RS07400 PF01726 LexA DNA binding domain TBD_RS07400 PF00717 Peptidase S24-like TBD_RS07445 PF01555 DNA methylase TBD_RS07460 PF09722 Protein of unknown function (DUF2384) TBD_RS07465 PF01966 HD domain TBD_RS07465 PF11871 Domain of unknown function (DUF3391) TBD_RS07470 PF00004 ATPase family associated with various cellular activities (AAA) TBD_RS07470 PF16193 AAA C-terminal domain TBD_RS07470 PF12002 MgsA AAA+ ATPase C terminal TBD_RS07475 PF03548 Outer membrane lipoprotein carrier protein LolA TBD_RS07490 PF03030 Inorganic H+ pyrophosphatase TBD_RS07500 PF00365 Phosphofructokinase TBD_RS07510 PF05191 Adenylate kinase, active site lid TBD_RS07515 PF02348 Cytidylyltransferase TBD_RS07525 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS07525 PF17151 Periplasmic sensor domain TBD_RS07530 PF02606 Tetraacyldisaccharide-1-P 4'-kinase TBD_RS07535 PF02472 Biopolymer transport protein ExbD/TolR TBD_RS07540 PF01618 MotA/TolQ/ExbB proton channel family TBD_RS07545 PF13742 OB-fold nucleic acid binding domain TBD_RS07545 PF02601 Exonuclease VII, large subunit TBD_RS07555 PF00274 Fructose-bisphosphate aldolase class-I TBD_RS07575 PF08676 MutL C terminal dimerisation domain TBD_RS07575 PF01119 DNA mismatch repair protein, C-terminal domain TBD_RS07585 PF11741 AMIN domain TBD_RS07585 PF01520 N-acetylmuramoyl-L-alanine amidase TBD_RS07595 PF08331 Domain of unknown function (DUF1730) TBD_RS07605 PF01177 Asp/Glu/Hydantoin racemase TBD_RS07610 PF00472 RF-1 domain TBD_RS07620 PF00579 tRNA synthetases class I (W and Y) TBD_RS07625 PF02163 Peptidase family M50 TBD_RS07630 PF01300 Telomere recombination TBD_RS07635 PF02811 PHP domain TBD_RS07640 PF04279 Intracellular septation protein A TBD_RS07645 PF03795 YCII-related domain TBD_RS07650 PF01722 BolA-like protein TBD_RS07660 PF17209 Hfq protein TBD_RS07665 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase TBD_RS07675 PF00535 Glycosyl transferase family 2 TBD_RS07685 PF01025 GrpE TBD_RS07690 PF00012 Hsp70 protein TBD_RS07695 PF00684 DnaJ central domain TBD_RS07695 PF01556 DnaJ C terminal domain TBD_RS07695 PF00226 DnaJ domain TBD_RS07700 PF01026 TatD related DNase TBD_RS07710 PF09115 DNA polymerase III, delta subunit, C terminal TBD_RS07715 PF02223 Thymidylate kinase TBD_RS07720 PF02618 YceG-like family TBD_RS07725 PF01063 Amino-transferase class IV TBD_RS07730 PF00425 chorismate binding enzyme TBD_RS07730 PF04715 Anthranilate synthase component I, N terminal region TBD_RS07735 PF02801 Beta-ketoacyl synthase, C-terminal domain TBD_RS07735 PF00109 Beta-ketoacyl synthase, N-terminal domain TBD_RS07740 PF00550 Phosphopantetheine attachment site TBD_RS07750 PF00698 Acyl transferase domain TBD_RS07755 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TBD_RS07755 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TBD_RS07760 PF02504 Fatty acid synthesis protein TBD_RS07765 PF01783 Ribosomal L32p protein family TBD_RS07770 PF02620 Large ribosomal RNA subunit accumulation protein YceD TBD_RS07775 PF02785 Biotin carboxylase C-terminal domain TBD_RS07775 PF00289 Biotin carboxylase, N-terminal domain TBD_RS07775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TBD_RS07780 PF00682 HMGL-like TBD_RS07780 PF02436 Conserved carboxylase domain TBD_RS07780 PF00364 Biotin-requiring enzyme TBD_RS07785 PF02545 Maf-like protein TBD_RS07790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TBD_RS07800 PF06965 Na+/H+ antiporter 1 TBD_RS07800 PF01343 Peptidase family S49 TBD_RS07810 PF13419 Haloacid dehalogenase-like hydrolase TBD_RS07815 PF00849 RNA pseudouridylate synthase TBD_RS07815 PF01479 S4 domain TBD_RS07820 PF10150 Ribonuclease E/G family TBD_RS07820 PF00575 S1 RNA binding domain TBD_RS07820 PF12111 Polyribonucleotide phosphorylase C terminal TBD_RS07825 PF01451 Low molecular weight phosphotyrosine protein phosphatase TBD_RS07835 PF00271 Helicase conserved C-terminal domain TBD_RS07835 PF17757 UvrB interaction domain TBD_RS07835 PF04851 Type III restriction enzyme, res subunit TBD_RS07835 PF02151 UvrB/uvrC motif TBD_RS07835 PF12344 Ultra-violet resistance protein B TBD_RS07840 PF00155 Aminotransferase class I and II TBD_RS07855 PF00589 Phage integrase family TBD_RS07880 PF01230 HIT domain TBD_RS07885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TBD_RS07890 PF05977 Transmembrane secretion effector TBD_RS07900 PF00156 Phosphoribosyl transferase domain TBD_RS07900 PF01738 Dienelactone hydrolase family TBD_RS07915 PF00005 ABC transporter TBD_RS07915 PF02687 FtsX-like permease family TBD_RS07915 PF12704 MacB-like periplasmic core domain TBD_RS07920 PF01738 Dienelactone hydrolase family TBD_RS07920 PF00156 Phosphoribosyl transferase domain TBD_RS07930 PF01875 Memo-like protein TBD_RS07935 PF05231 MASE1 TBD_RS07935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS07935 PF07730 Histidine kinase TBD_RS07940 PF00072 Response regulator receiver domain TBD_RS07940 PF00196 Bacterial regulatory proteins, luxR family TBD_RS07945 PF17151 Periplasmic sensor domain TBD_RS07945 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS07950 PF00669 Bacterial flagellin N-terminal helical region TBD_RS07950 PF00700 Bacterial flagellin C-terminal helical region TBD_RS07960 PF02465 Flagellar hook-associated protein 2 N-terminus TBD_RS07960 PF07195 Flagellar hook-associated protein 2 C-terminus TBD_RS07965 PF02561 Flagellar protein FliS TBD_RS07980 PF01312 FlhB HrpN YscU SpaS Family TBD_RS07985 PF07238 PilZ domain TBD_RS07985 PF07317 Flagellar regulator YcgR TBD_RS07990 PF00072 Response regulator receiver domain TBD_RS07990 PF01584 CheW-like domain TBD_RS07995 PF02049 Flagellar hook-basal body complex protein FliE TBD_RS08000 PF08345 Flagellar M-ring protein C-terminal TBD_RS08000 PF01514 Secretory protein of YscJ/FliF family TBD_RS08005 PF14842 FliG N-terminal domain TBD_RS08005 PF14841 FliG middle domain TBD_RS08005 PF01706 FliG C-terminal domain TBD_RS08015 PF18269 T3SS EscN ATPase C-terminal domain TBD_RS08015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TBD_RS08035 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TBD_RS08035 PF02154 Flagellar motor switch protein FliM TBD_RS08040 PF16973 Flagellar motor switch protein FliN N-terminal TBD_RS08040 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TBD_RS08045 PF04347 Flagellar biosynthesis protein, FliO TBD_RS08050 PF00813 FliP family TBD_RS08055 PF01313 Bacterial export proteins, family 3 TBD_RS08060 PF01311 Bacterial export proteins, family 1 TBD_RS08065 PF04344 Chemotaxis phosphatase, CheZ TBD_RS08070 PF00072 Response regulator receiver domain TBD_RS08075 PF01339 CheB methylesterase TBD_RS08075 PF00072 Response regulator receiver domain TBD_RS08080 PF03975 CheD chemotactic sensory transduction TBD_RS08085 PF03705 CheR methyltransferase, all-alpha domain TBD_RS08085 PF01739 CheR methyltransferase, SAM binding domain TBD_RS08090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TBD_RS08090 PF08447 PAS fold TBD_RS08095 PF00672 HAMP domain TBD_RS08095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TBD_RS08095 PF02203 Tar ligand binding domain homologue TBD_RS08100 PF02203 Tar ligand binding domain homologue TBD_RS08100 PF00672 HAMP domain TBD_RS08100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TBD_RS08105 PF00149 Calcineurin-like phosphoesterase TBD_RS08105 PF02872 5'-nucleotidase, C-terminal domain TBD_RS08110 PF02203 Tar ligand binding domain homologue TBD_RS08110 PF00672 HAMP domain TBD_RS08110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TBD_RS08115 PF01584 CheW-like domain TBD_RS08120 PF01584 CheW-like domain TBD_RS08120 PF09078 CheY binding TBD_RS08120 PF02895 Signal transducing histidine kinase, homodimeric domain TBD_RS08120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS08120 PF01627 Hpt domain TBD_RS08125 PF00072 Response regulator receiver domain TBD_RS08135 PF00669 Bacterial flagellin N-terminal helical region TBD_RS08140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TBD_RS08140 PF00460 Flagella basal body rod protein TBD_RS08145 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TBD_RS08145 PF10135 Rod binding protein TBD_RS08150 PF02119 Flagellar P-ring protein TBD_RS08155 PF02107 Flagellar L-ring protein TBD_RS08160 PF00460 Flagella basal body rod protein TBD_RS08160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TBD_RS08165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TBD_RS08165 PF00460 Flagella basal body rod protein TBD_RS08170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TBD_RS08170 PF07559 Flagellar basal body protein FlaE TBD_RS08170 PF00460 Flagella basal body rod protein TBD_RS08175 PF13861 FlgD Tudor-like domain TBD_RS08175 PF13860 FlgD Ig-like domain TBD_RS08175 PF03963 Flagellar hook capping protein - N-terminal region TBD_RS08180 PF00460 Flagella basal body rod protein TBD_RS08180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TBD_RS08185 PF00460 Flagella basal body rod protein TBD_RS08195 PF04316 Anti-sigma-28 factor, FlgM TBD_RS08205 PF05430 S-adenosyl-L-methionine-dependent methyltransferase TBD_RS08205 PF01266 FAD dependent oxidoreductase TBD_RS08215 PF01613 Flavin reductase like domain TBD_RS08225 PF02754 Cysteine-rich domain TBD_RS08230 PF13183 4Fe-4S dicluster domain TBD_RS08230 PF13085 2Fe-2S iron-sulfur cluster binding domain TBD_RS08235 PF01266 FAD dependent oxidoreductase TBD_RS08235 PF00355 Rieske [2Fe-2S] domain TBD_RS08240 PF01593 Flavin containing amine oxidoreductase TBD_RS08260 PF00719 Inorganic pyrophosphatase TBD_RS08270 PF08281 Sigma-70, region 4 TBD_RS08270 PF04542 Sigma-70 region 2 TBD_RS08280 PF00271 Helicase conserved C-terminal domain TBD_RS08280 PF17757 UvrB interaction domain TBD_RS08280 PF02559 CarD-like/TRCF domain TBD_RS08280 PF00270 DEAD/DEAH box helicase TBD_RS08280 PF03461 TRCF domain TBD_RS08300 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS08300 PF00563 EAL domain TBD_RS08300 PF08448 PAS fold TBD_RS08310 PF00929 Exonuclease TBD_RS08315 PF00075 RNase H TBD_RS08325 PF16123 Hydroxyacylglutathione hydrolase C-terminus TBD_RS08325 PF00753 Metallo-beta-lactamase superfamily TBD_RS08330 PF01464 Transglycosylase SLT domain TBD_RS08330 PF01476 LysM domain TBD_RS08340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TBD_RS08340 PF00005 ABC transporter TBD_RS08345 PF12911 N-terminal TM domain of oligopeptide transport permease C TBD_RS08345 PF00528 Binding-protein-dependent transport system inner membrane component TBD_RS08350 PF00528 Binding-protein-dependent transport system inner membrane component TBD_RS08365 PF13145 PPIC-type PPIASE domain TBD_RS08380 PF00216 Bacterial DNA-binding protein TBD_RS08385 PF00004 ATPase family associated with various cellular activities (AAA) TBD_RS08385 PF05362 Lon protease (S16) C-terminal proteolytic domain TBD_RS08385 PF02190 ATP-dependent protease La (LON) substrate-binding domain TBD_RS08390 PF10431 C-terminal, D2-small domain, of ClpB protein TBD_RS08390 PF06689 ClpX C4-type zinc finger TBD_RS08390 PF07724 AAA domain (Cdc48 subfamily) TBD_RS08395 PF00574 Clp protease TBD_RS08400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TBD_RS08400 PF05697 Bacterial trigger factor protein (TF) TBD_RS08400 PF05698 Bacterial trigger factor protein (TF) C-terminus TBD_RS08405 PF00589 Phage integrase family TBD_RS08425 PF00565 Staphylococcal nuclease homologue TBD_RS08470 PF00004 ATPase family associated with various cellular activities (AAA) TBD_RS08495 PF01134 Glucose inhibited division protein A TBD_RS08500 PF00106 short chain dehydrogenase TBD_RS08505 PF03793 PASTA domain TBD_RS08505 PF00069 Protein kinase domain TBD_RS08510 PF00909 Ammonium Transporter Family TBD_RS08515 PF00902 Sec-independent protein translocase protein (TatC) TBD_RS08520 PF02416 mttA/Hcf106 family TBD_RS08525 PF02416 mttA/Hcf106 family TBD_RS08535 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TBD_RS08540 PF01502 Phosphoribosyl-AMP cyclohydrolase TBD_RS08545 PF00977 Histidine biosynthesis protein TBD_RS08550 PF00977 Histidine biosynthesis protein TBD_RS08555 PF00117 Glutamine amidotransferase class-I TBD_RS08560 PF00475 Imidazoleglycerol-phosphate dehydratase TBD_RS08565 PF00155 Aminotransferase class I and II TBD_RS08570 PF00815 Histidinol dehydrogenase TBD_RS08590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TBD_RS08590 PF03466 LysR substrate binding domain TBD_RS08595 PF07690 Major Facilitator Superfamily TBD_RS08605 PF04536 TPM domain TBD_RS08610 PF04011 LemA family TBD_RS08615 PF08241 Methyltransferase domain TBD_RS08620 PF03167 Uracil DNA glycosylase superfamily TBD_RS08625 PF00583 Acetyltransferase (GNAT) family TBD_RS08630 PF00814 Glycoprotease family TBD_RS08635 PF07995 Glucose / Sorbosone dehydrogenase TBD_RS08645 PF13638 PIN domain TBD_RS08645 PF02562 PhoH-like protein TBD_RS08665 PF13847 Methyltransferase domain TBD_RS08665 PF10119 Predicted methyltransferase regulatory domain TBD_RS08670 PF00270 DEAD/DEAH box helicase TBD_RS08670 PF00271 Helicase conserved C-terminal domain TBD_RS08680 PF00749 tRNA synthetases class I (E and Q), catalytic domain TBD_RS08690 PF00582 Universal stress protein family TBD_RS08705 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TBD_RS08705 PF13247 4Fe-4S dicluster domain TBD_RS08705 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS08710 PF13247 4Fe-4S dicluster domain TBD_RS08715 PF03916 Polysulphide reductase, NrfD TBD_RS08720 PF01568 Molydopterin dinucleotide binding domain TBD_RS08720 PF00384 Molybdopterin oxidoreductase TBD_RS08720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TBD_RS08725 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TBD_RS08730 PF00196 Bacterial regulatory proteins, luxR family TBD_RS08730 PF00072 Response regulator receiver domain TBD_RS08735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS08735 PF00989 PAS fold TBD_RS08735 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS08745 PF00873 AcrB/AcrD/AcrF family TBD_RS08760 PF00072 Response regulator receiver domain TBD_RS08760 PF00486 Transcriptional regulatory protein, C terminal TBD_RS08765 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS08765 PF00672 HAMP domain TBD_RS08765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS08770 PF00117 Glutamine amidotransferase class-I TBD_RS08770 PF02540 NAD synthase TBD_RS08770 PF00958 GMP synthase C terminal domain TBD_RS08775 PF00478 IMP dehydrogenase / GMP reductase domain TBD_RS08775 PF00571 CBS domain TBD_RS08785 PF03658 RnfH family Ubiquitin TBD_RS08790 PF03364 Polyketide cyclase / dehydrase and lipid transport TBD_RS08795 PF01668 SmpB protein TBD_RS08800 PF00581 Rhodanese-like domain TBD_RS08805 PF13291 ACT domain TBD_RS08805 PF04607 Region found in RelA / SpoT proteins TBD_RS08805 PF02824 TGS domain TBD_RS08810 PF00753 Metallo-beta-lactamase superfamily TBD_RS08810 PF03772 Competence protein TBD_RS08815 PF00005 ABC transporter TBD_RS08820 PF12704 MacB-like periplasmic core domain TBD_RS08820 PF02687 FtsX-like permease family TBD_RS08825 PF01894 Uncharacterised protein family UPF0047 TBD_RS08835 PF18693 TRAM domain TBD_RS08835 PF04055 Radical SAM superfamily TBD_RS08835 PF00919 Uncharacterized protein family UPF0004 TBD_RS08885 PF00465 Iron-containing alcohol dehydrogenase TBD_RS08900 PF00970 Oxidoreductase FAD-binding domain TBD_RS08900 PF00111 2Fe-2S iron-sulfur cluster binding domain TBD_RS08900 PF00175 Oxidoreductase NAD-binding domain TBD_RS08905 PF01368 DHH family TBD_RS08905 PF02272 DHHA1 domain TBD_RS08905 PF17768 RecJ OB domain TBD_RS08915 PF00291 Pyridoxal-phosphate dependent enzyme TBD_RS08920 PF16363 GDP-mannose 4,6 dehydratase TBD_RS08925 PF01370 NAD dependent epimerase/dehydratase family TBD_RS08930 PF16363 GDP-mannose 4,6 dehydratase TBD_RS08935 PF04321 RmlD substrate binding domain TBD_RS08940 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TBD_RS08945 PF00483 Nucleotidyl transferase TBD_RS08950 PF16363 GDP-mannose 4,6 dehydratase TBD_RS08970 PF13439 Glycosyltransferase Family 4 TBD_RS08970 PF00534 Glycosyl transferases group 1 TBD_RS09005 PF09721 Transmembrane exosortase (Exosortase_EpsH) TBD_RS09010 PF13614 AAA domain TBD_RS09015 PF02706 Chain length determinant protein TBD_RS09015 PF13807 G-rich domain on putative tyrosine kinase TBD_RS09015 PF13614 AAA domain TBD_RS09020 PF02563 Polysaccharide biosynthesis/export protein TBD_RS09020 PF10531 SLBB domain TBD_RS09020 PF18412 Outer-membrane lipoprotein Wza C-terminal domain TBD_RS09050 PF02397 Bacterial sugar transferase TBD_RS09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS09075 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS09080 PF00072 Response regulator receiver domain TBD_RS09080 PF00158 Sigma-54 interaction domain TBD_RS09080 PF02954 Bacterial regulatory protein, Fis family TBD_RS09085 PF00589 Phage integrase family TBD_RS09090 PF00145 C-5 cytosine-specific DNA methylase TBD_RS09090 PF01381 Helix-turn-helix TBD_RS09130 PF18272 single-stranded DNA binding TraI N-terminal subdomain TBD_RS09130 PF08751 TrwC relaxase TBD_RS09130 PF18340 DNA relaxase TraI 2B/2B-like domain TBD_RS09130 PF07057 DNA helicase TraI TBD_RS09170 PF04386 Stringent starvation protein B TBD_RS09175 PF02798 Glutathione S-transferase, N-terminal domain TBD_RS09175 PF00043 Glutathione S-transferase, C-terminal domain TBD_RS09180 PF02167 Cytochrome C1 family TBD_RS09185 PF00032 Cytochrome b(C-terminal)/b6/petD TBD_RS09185 PF00033 Cytochrome b/b6/petB TBD_RS09190 PF00355 Rieske [2Fe-2S] domain TBD_RS09190 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TBD_RS09195 PF17820 PDZ domain TBD_RS09195 PF13180 PDZ domain TBD_RS09205 PF04542 Sigma-70 region 2 TBD_RS09205 PF08281 Sigma-70, region 4 TBD_RS09220 PF00929 Exonuclease TBD_RS09230 PF01329 Pterin 4 alpha carbinolamine dehydratase TBD_RS09235 PF03193 RsgA GTPase TBD_RS09250 PF01965 DJ-1/PfpI family TBD_RS09255 PF04461 Protein of unknown function (DUF520) TBD_RS09265 PF06865 Pyrimidine/purine nucleoside phosphorylase TBD_RS09270 PF00764 Arginosuccinate synthase TBD_RS09280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TBD_RS09280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TBD_RS09285 PF00202 Aminotransferase class-III TBD_RS09300 PF01649 Ribosomal protein S20 TBD_RS09305 PF03023 Lipid II flippase MurJ TBD_RS09310 PF06574 FAD synthetase TBD_RS09310 PF01687 Riboflavin kinase TBD_RS09315 PF00133 tRNA synthetases class I (I, L, M and V) TBD_RS09315 PF08264 Anticodon-binding domain of tRNA TBD_RS09315 PF06827 Zinc finger found in FPG and IleRS TBD_RS09320 PF01252 Signal peptidase (SPase) II TBD_RS09325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TBD_RS09330 PF02401 LytB protein TBD_RS09355 PF07963 Prokaryotic N-terminal methylation motif TBD_RS09355 PF14245 Type IV pilin PilA TBD_RS09360 PF01266 FAD dependent oxidoreductase TBD_RS09370 PF00534 Glycosyl transferases group 1 TBD_RS09370 PF13439 Glycosyltransferase Family 4 TBD_RS09385 PF02719 Polysaccharide biosynthesis protein TBD_RS09390 PF00953 Glycosyl transferase family 4 TBD_RS09395 PF01370 NAD dependent epimerase/dehydratase family TBD_RS09400 PF00535 Glycosyl transferase family 2 TBD_RS09405 PF01501 Glycosyl transferase family 8 TBD_RS09405 PF00535 Glycosyl transferase family 2 TBD_RS09410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TBD_RS09410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TBD_RS09410 PF00205 Thiamine pyrophosphate enzyme, central domain TBD_RS09415 PF00005 ABC transporter TBD_RS09420 PF01061 ABC-2 type transporter TBD_RS09425 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TBD_RS09430 PF16363 GDP-mannose 4,6 dehydratase TBD_RS09435 PF00483 Nucleotidyl transferase TBD_RS09455 PF01761 3-dehydroquinate synthase TBD_RS09480 PF01634 ATP phosphoribosyltransferase TBD_RS09485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TBD_RS09490 PF01722 BolA-like protein TBD_RS09495 PF01061 ABC-2 type transporter TBD_RS09500 PF00005 ABC transporter TBD_RS09520 PF02470 MlaD protein TBD_RS09525 PF02405 Permease MlaE TBD_RS09530 PF00005 ABC transporter TBD_RS09540 PF01406 tRNA synthetases class I (C) catalytic domain TBD_RS09540 PF09190 DALR domain TBD_RS09550 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TBD_RS09555 PF00149 Calcineurin-like phosphoesterase TBD_RS09565 PF01053 Cys/Met metabolism PLP-dependent enzyme TBD_RS09570 PF00156 Phosphoribosyl transferase domain TBD_RS09585 PF02875 Mur ligase family, glutamate ligase domain TBD_RS09585 PF08245 Mur ligase middle domain TBD_RS09590 PF01039 Carboxyl transferase domain TBD_RS09590 PF17848 Acetyl-coA carboxylase zinc finger domain TBD_RS09595 PF00290 Tryptophan synthase alpha chain TBD_RS09600 PF00291 Pyridoxal-phosphate dependent enzyme TBD_RS09605 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TBD_RS09610 PF01416 tRNA pseudouridine synthase TBD_RS09625 PF02774 Semialdehyde dehydrogenase, dimerisation domain TBD_RS09625 PF01118 Semialdehyde dehydrogenase, NAD binding domain TBD_RS09630 PF00180 Isocitrate/isopropylmalate dehydrogenase TBD_RS09635 PF00694 Aconitase C-terminal domain TBD_RS09640 PF00330 Aconitase family (aconitate hydratase) TBD_RS09645 PF12832 MFS_1 like family TBD_RS09650 PF04304 Protein of unknown function (DUF454) TBD_RS09655 PF01613 Flavin reductase like domain TBD_RS09665 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS09670 PF10609 NUBPL iron-transfer P-loop NTPase TBD_RS09695 PF13460 NAD(P)H-binding TBD_RS09695 PF11066 Protein of unknown function (DUF2867) TBD_RS09715 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS09715 PF00563 EAL domain TBD_RS09715 PF08448 PAS fold TBD_RS09735 PF02560 Cyanate lyase C-terminal domain TBD_RS09740 PF03793 PASTA domain TBD_RS09740 PF00069 Protein kinase domain TBD_RS09745 PF01226 Formate/nitrite transporter TBD_RS09750 PF16921 Tex protein YqgF-like domain TBD_RS09750 PF17674 HHH domain TBD_RS09750 PF00575 S1 RNA binding domain TBD_RS09750 PF09371 Tex-like protein N-terminal domain TBD_RS09765 PF00970 Oxidoreductase FAD-binding domain TBD_RS09765 PF00042 Globin TBD_RS09765 PF00175 Oxidoreductase NAD-binding domain TBD_RS09780 PF04055 Radical SAM superfamily TBD_RS09790 PF08448 PAS fold TBD_RS09790 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS09800 PF00485 Phosphoribulokinase / Uridine kinase family TBD_RS09830 PF04264 YceI-like domain TBD_RS09885 PF00392 Bacterial regulatory proteins, gntR family TBD_RS09885 PF00155 Aminotransferase class I and II TBD_RS09900 PF00268 Ribonucleotide reductase, small chain TBD_RS09905 PF03477 ATP cone domain TBD_RS09905 PF00317 Ribonucleotide reductase, all-alpha domain TBD_RS09905 PF02867 Ribonucleotide reductase, barrel domain TBD_RS09910 PF00551 Formyl transferase TBD_RS09910 PF01842 ACT domain TBD_RS09920 PF03358 NADPH-dependent FMN reductase TBD_RS09930 PF00581 Rhodanese-like domain TBD_RS09940 PF11823 Protein of unknown function (DUF3343) TBD_RS09940 PF01206 Sulfurtransferase TusA TBD_RS09950 PF08361 MAATS-type transcriptional repressor, C-terminal region TBD_RS09950 PF00440 Bacterial regulatory proteins, tetR family TBD_RS09955 PF00892 EamA-like transporter family TBD_RS09960 PF08502 LeuA allosteric (dimerisation) domain TBD_RS09960 PF00682 HMGL-like TBD_RS09965 PF01066 CDP-alcohol phosphatidyltransferase TBD_RS09970 PF02666 Phosphatidylserine decarboxylase TBD_RS09975 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TBD_RS09975 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TBD_RS09980 PF10369 Small subunit of acetolactate synthase TBD_RS09985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TBD_RS09985 PF00205 Thiamine pyrophosphate enzyme, central domain TBD_RS09985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TBD_RS10020 PF01565 FAD binding domain TBD_RS10020 PF02913 FAD linked oxidases, C-terminal domain TBD_RS10060 PF13356 Arm DNA-binding domain TBD_RS10060 PF00589 Phage integrase family TBD_RS10070 PF00578 AhpC/TSA family TBD_RS10075 PF01066 CDP-alcohol phosphatidyltransferase TBD_RS10080 PF04408 Helicase associated domain (HA2) TBD_RS10080 PF00270 DEAD/DEAH box helicase TBD_RS10080 PF00271 Helicase conserved C-terminal domain TBD_RS10080 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold TBD_RS10080 PF11898 Domain of unknown function (DUF3418) TBD_RS10110 PF02082 Transcriptional regulator TBD_RS10115 PF02508 Rnf-Nqr subunit, membrane protein TBD_RS10120 PF04060 Putative Fe-S cluster TBD_RS10125 PF13375 RnfC Barrel sandwich hybrid domain TBD_RS10125 PF12838 4Fe-4S dicluster domain TBD_RS10125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TBD_RS10130 PF03116 NQR2, RnfD, RnfE family TBD_RS10135 PF04205 FMN-binding domain TBD_RS10140 PF02508 Rnf-Nqr subunit, membrane protein TBD_RS10145 PF00633 Helix-hairpin-helix motif TBD_RS10145 PF00730 HhH-GPD superfamily base excision DNA repair protein TBD_RS10145 PF10576 Iron-sulfur binding domain of endonuclease III TBD_RS10155 PF00072 Response regulator receiver domain TBD_RS10155 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS10160 PF13380 CoA binding domain TBD_RS10160 PF00583 Acetyltransferase (GNAT) family TBD_RS10160 PF13607 Succinyl-CoA ligase like flavodoxin domain TBD_RS10165 PF00850 Histone deacetylase domain TBD_RS10170 PF00034 Cytochrome c TBD_RS10175 PF00034 Cytochrome c TBD_RS10180 PF01740 STAS domain TBD_RS10180 PF00916 Sulfate permease family TBD_RS10185 PF00565 Staphylococcal nuclease homologue TBD_RS10190 PF02463 RecF/RecN/SMC N terminal domain TBD_RS10190 PF13476 AAA domain TBD_RS10195 PF01513 ATP-NAD kinase TBD_RS10200 PF01628 HrcA protein C terminal domain TBD_RS10205 PF00762 Ferrochelatase TBD_RS10215 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding TBD_RS10215 PF10518 TAT (twin-arginine translocation) pathway signal sequence TBD_RS10215 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS10220 PF00582 Universal stress protein family TBD_RS10235 PF00186 Dihydrofolate reductase TBD_RS10240 PF00303 Thymidylate synthase TBD_RS10250 PF04376 Arginine-tRNA-protein transferase, N terminus TBD_RS10250 PF04377 Arginine-tRNA-protein transferase, C terminus TBD_RS10255 PF03588 Leucyl/phenylalanyl-tRNA protein transferase TBD_RS10260 PF00403 Heavy-metal-associated domain TBD_RS10275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TBD_RS10280 PF01032 FecCD transport family TBD_RS10285 PF00005 ABC transporter TBD_RS10290 PF01743 Poly A polymerase head domain TBD_RS10290 PF12626 Polymerase A arginine-rich C-terminus TBD_RS10290 PF12627 Probable RNA and SrmB- binding site of polymerase A TBD_RS10295 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TBD_RS10300 PF01712 Deoxynucleoside kinase TBD_RS10305 PF02548 Ketopantoate hydroxymethyltransferase TBD_RS10310 PF02569 Pantoate-beta-alanine ligase TBD_RS10315 PF02261 Aspartate decarboxylase TBD_RS10320 PF00343 Carbohydrate phosphorylase TBD_RS10325 PF08323 Starch synthase catalytic domain TBD_RS10325 PF00534 Glycosyl transferases group 1 TBD_RS10330 PF00128 Alpha amylase, catalytic domain TBD_RS10330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TBD_RS10330 PF02806 Alpha amylase, C-terminal all-beta domain TBD_RS10335 PF02446 4-alpha-glucanotransferase TBD_RS10345 PF00483 Nucleotidyl transferase TBD_RS10350 PF02685 Glucokinase TBD_RS10355 PF00342 Phosphoglucose isomerase TBD_RS10360 PF01370 NAD dependent epimerase/dehydratase family TBD_RS10365 PF02705 K+ potassium transporter TBD_RS10385 PF00772 DnaB-like helicase N terminal domain TBD_RS10385 PF03796 DnaB-like helicase C terminal domain TBD_RS10405 PF00589 Phage integrase family TBD_RS10405 PF13356 Arm DNA-binding domain TBD_RS10415 PF02547 Queuosine biosynthesis protein TBD_RS10420 PF01702 Queuine tRNA-ribosyltransferase TBD_RS10430 PF01435 Peptidase family M48 TBD_RS10435 PF02699 Preprotein translocase subunit TBD_RS10440 PF02355 Protein export membrane protein TBD_RS10440 PF07549 SecD/SecF GG Motif TBD_RS10440 PF13721 SecD export protein N-terminal TM region TBD_RS10445 PF07549 SecD/SecF GG Motif TBD_RS10445 PF02355 Protein export membrane protein TBD_RS10450 PF09335 SNARE associated Golgi protein TBD_RS10460 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ TBD_RS10465 PF11967 Recombination protein O N terminal TBD_RS10465 PF02565 Recombination protein O C terminal TBD_RS10470 PF01926 50S ribosome-binding GTPase TBD_RS10470 PF07650 KH domain TBD_RS10475 PF14622 Ribonuclease-III-like TBD_RS10475 PF00035 Double-stranded RNA binding motif TBD_RS10485 PF10502 Signal peptidase, peptidase S26 TBD_RS10490 PF00679 Elongation factor G C-terminus TBD_RS10490 PF00009 Elongation factor Tu GTP binding domain TBD_RS10490 PF03144 Elongation factor Tu domain 2 TBD_RS10490 PF06421 GTP-binding protein LepA C-terminus TBD_RS10500 PF13180 PDZ domain TBD_RS10520 PF04542 Sigma-70 region 2 TBD_RS10520 PF08281 Sigma-70, region 4 TBD_RS10525 PF00890 FAD binding domain TBD_RS10525 PF02910 Fumarate reductase flavoprotein C-term TBD_RS10530 PF01571 Aminomethyltransferase folate-binding domain TBD_RS10540 PF00842 Alanine racemase, C-terminal domain TBD_RS10540 PF01168 Alanine racemase, N-terminal domain TBD_RS10545 PF03796 DnaB-like helicase C terminal domain TBD_RS10545 PF00772 DnaB-like helicase N terminal domain TBD_RS10550 PF01281 Ribosomal protein L9, N-terminal domain TBD_RS10550 PF03948 Ribosomal protein L9, C-terminal domain TBD_RS10555 PF01084 Ribosomal protein S18 TBD_RS10565 PF01250 Ribosomal protein S6 TBD_RS10570 PF01276 Orn/Lys/Arg decarboxylase, major domain TBD_RS10570 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain TBD_RS10570 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain TBD_RS10575 PF00692 dUTPase TBD_RS10580 PF10609 NUBPL iron-transfer P-loop NTPase TBD_RS10590 PF00293 NUDIX domain TBD_RS10600 PF04073 Aminoacyl-tRNA editing domain TBD_RS10600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TBD_RS10600 PF03129 Anticodon binding domain TBD_RS10605 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain TBD_RS10605 PF01464 Transglycosylase SLT domain TBD_RS10635 PF00578 AhpC/TSA family TBD_RS10640 PF00206 Lyase TBD_RS10640 PF10415 Fumarase C C-terminus TBD_RS10645 PF01926 50S ribosome-binding GTPase TBD_RS10650 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TBD_RS10655 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain TBD_RS10655 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain TBD_RS10660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TBD_RS10660 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TBD_RS10665 PF01914 MarC family integral membrane protein TBD_RS10670 PF02390 Putative methyltransferase TBD_RS10675 PF05690 Thiazole biosynthesis protein ThiG TBD_RS10680 PF05690 Thiazole biosynthesis protein ThiG TBD_RS10680 PF02597 ThiS family TBD_RS10695 PF14815 NUDIX domain TBD_RS10695 PF00633 Helix-hairpin-helix motif TBD_RS10695 PF10576 Iron-sulfur binding domain of endonuclease III TBD_RS10695 PF00730 HhH-GPD superfamily base excision DNA repair protein TBD_RS10710 PF00445 Ribonuclease T2 family TBD_RS10715 PF01063 Amino-transferase class IV TBD_RS10730 PF00561 alpha/beta hydrolase fold TBD_RS10735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TBD_RS10735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TBD_RS10735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TBD_RS10735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TBD_RS10740 PF13439 Glycosyltransferase Family 4 TBD_RS10740 PF00534 Glycosyl transferases group 1 TBD_RS10745 PF01544 CorA-like Mg2+ transporter protein TBD_RS10760 PF00994 Probable molybdopterin binding domain TBD_RS10780 PF04751 Protein of unknown function (DUF615) TBD_RS10785 PF01523 Putative modulator of DNA gyrase TBD_RS10790 PF13472 GDSL-like Lipase/Acylhydrolase family TBD_RS10800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TBD_RS10805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TBD_RS10810 PF04055 Radical SAM superfamily TBD_RS10810 PF08497 Radical SAM N-terminal TBD_RS10810 PF11842 Domain of unknown function (DUF3362) TBD_RS10830 PF00034 Cytochrome c TBD_RS10830 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TBD_RS10840 PF08668 HDOD domain TBD_RS10840 PF00563 EAL domain TBD_RS10850 PF03848 Tellurite resistance protein TehB TBD_RS10855 PF03232 Ubiquinone biosynthesis protein COQ7 TBD_RS10860 PF03480 Bacterial extracellular solute-binding protein, family 7 TBD_RS10865 PF00464 Serine hydroxymethyltransferase TBD_RS10870 PF03477 ATP cone domain TBD_RS10875 PF00194 Eukaryotic-type carbonic anhydrase TBD_RS10880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TBD_RS10880 PF01872 RibD C-terminal domain TBD_RS10900 PF03477 ATP cone domain TBD_RS10900 PF13597 Anaerobic ribonucleoside-triphosphate reductase TBD_RS10960 PF02036 SCP-2 sterol transfer family TBD_RS10965 PF01242 6-pyruvoyl tetrahydropterin synthase TBD_RS10970 PF01136 Peptidase family U32 TBD_RS10975 PF01136 Peptidase family U32 TBD_RS10980 PF16199 Radical_SAM C-terminal domain TBD_RS10980 PF04055 Radical SAM superfamily TBD_RS10985 PF03060 Nitronate monooxygenase TBD_RS10990 PF00677 Lumazine binding domain TBD_RS10995 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TBD_RS10995 PF00925 GTP cyclohydrolase II TBD_RS11000 PF00885 6,7-dimethyl-8-ribityllumazine synthase TBD_RS11005 PF01029 NusB family TBD_RS11010 PF00586 AIR synthase related protein, N-terminal domain TBD_RS11010 PF02769 AIR synthase related protein, C-terminal domain TBD_RS11015 PF04608 Phosphatidylglycerophosphatase A TBD_RS11020 PF02464 Competence-damaged protein TBD_RS11030 PF00154 recA bacterial DNA recombination protein TBD_RS11035 PF02631 RecX family TBD_RS11045 PF07963 Prokaryotic N-terminal methylation motif TBD_RS11045 PF00114 Pilin (bacterial filament) TBD_RS11055 PF04143 Sulphur transport TBD_RS11060 PF06508 Queuosine biosynthesis protein QueC TBD_RS11065 PF04055 Radical SAM superfamily TBD_RS11070 PF16331 TolA binding protein trimerisation TBD_RS11070 PF13525 Outer membrane lipoprotein TBD_RS11075 PF00691 OmpA family TBD_RS11080 PF07676 WD40-like Beta Propeller Repeat TBD_RS11080 PF04052 TolB amino-terminal domain TBD_RS11090 PF02472 Biopolymer transport protein ExbD/TolR TBD_RS11095 PF01618 MotA/TolQ/ExbB proton channel family TBD_RS11100 PF03061 Thioesterase superfamily TBD_RS11105 PF17864 RuvB AAA lid domain TBD_RS11105 PF05491 RuvB C-terminal winged helix domain TBD_RS11105 PF05496 Holliday junction DNA helicase RuvB P-loop domain TBD_RS11110 PF00072 Response regulator receiver domain TBD_RS11110 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS11115 PF07499 RuvA, C-terminal domain TBD_RS11115 PF01330 RuvA N terminal domain TBD_RS11120 PF02075 Crossover junction endodeoxyribonuclease RuvC TBD_RS11125 PF01709 Transcriptional regulator TBD_RS11130 PF00480 ROK family TBD_RS11140 PF15975 Flotillin TBD_RS11140 PF01145 SPFH domain / Band 7 family TBD_RS11145 PF07290 Protein of unknown function (DUF1449) TBD_RS11150 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS11155 PF05872 Bacterial protein of unknown function (DUF853) TBD_RS11160 PF00218 Indole-3-glycerol phosphate synthase TBD_RS11165 PF02885 Glycosyl transferase family, helical bundle domain TBD_RS11165 PF00591 Glycosyl transferase family, a/b domain TBD_RS11170 PF00117 Glutamine amidotransferase class-I TBD_RS11175 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS11185 PF02954 Bacterial regulatory protein, Fis family TBD_RS11185 PF00072 Response regulator receiver domain TBD_RS11185 PF00158 Sigma-54 interaction domain TBD_RS11190 PF00425 chorismate binding enzyme TBD_RS11190 PF04715 Anthranilate synthase component I, N terminal region TBD_RS11195 PF13419 Haloacid dehalogenase-like hydrolase TBD_RS11200 PF00834 Ribulose-phosphate 3 epimerase family TBD_RS11205 PF04379 ApaG domain TBD_RS11210 PF03562 MltA specific insert domain TBD_RS11210 PF06725 3D domain TBD_RS11225 PF07730 Histidine kinase TBD_RS11225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS11230 PF04397 LytTr DNA-binding domain TBD_RS11230 PF00072 Response regulator receiver domain TBD_RS11235 PF00072 Response regulator receiver domain TBD_RS11235 PF00196 Bacterial regulatory proteins, luxR family TBD_RS11265 PF13396 Phospholipase_D-nuclease N-terminal TBD_RS11265 PF13091 PLD-like domain TBD_RS11280 PF02735 Ku70/Ku80 beta-barrel domain TBD_RS11285 PF01068 ATP dependent DNA ligase domain TBD_RS11285 PF04679 ATP dependent DNA ligase C terminal region TBD_RS11285 PF13298 DNA polymerase Ligase (LigD) TBD_RS11300 PF05532 CsbD-like TBD_RS11315 PF01594 AI-2E family transporter TBD_RS11320 PF05170 AsmA family TBD_RS11330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TBD_RS11330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TBD_RS11340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TBD_RS11340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TBD_RS11375 PF00403 Heavy-metal-associated domain TBD_RS11380 PF09278 MerR, DNA binding TBD_RS11380 PF00376 MerR family regulatory protein TBD_RS11385 PF03544 Gram-negative bacterial TonB protein C-terminal TBD_RS11400 PF08376 Nitrate and nitrite sensing TBD_RS11400 PF03861 ANTAR domain TBD_RS11410 PF00528 Binding-protein-dependent transport system inner membrane component TBD_RS11415 PF00005 ABC transporter TBD_RS11425 PF18273 Type III R-M EcoP15I C-terminal domain TBD_RS11425 PF01555 DNA methylase TBD_RS11440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS11440 PF08446 PAS fold TBD_RS11440 PF00360 Phytochrome region TBD_RS11440 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS11440 PF01590 GAF domain TBD_RS11445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TBD_RS11455 PF00890 FAD binding domain TBD_RS11460 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit TBD_RS11460 PF13187 4Fe-4S dicluster domain TBD_RS11470 PF03466 LysR substrate binding domain TBD_RS11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TBD_RS11475 PF01717 Cobalamin-independent synthase, Catalytic domain TBD_RS11475 PF08267 Cobalamin-independent synthase, N-terminal domain TBD_RS11485 PF12706 Beta-lactamase superfamily domain TBD_RS11495 PF07969 Amidohydrolase family TBD_RS11500 PF00005 ABC transporter TBD_RS11505 PF00005 ABC transporter TBD_RS11510 PF06007 Phosphonate metabolism protein PhnJ TBD_RS11515 PF05861 Bacterial phosphonate metabolism protein (PhnI) TBD_RS11530 PF00528 Binding-protein-dependent transport system inner membrane component TBD_RS11535 PF00528 Binding-protein-dependent transport system inner membrane component TBD_RS11540 PF00005 ABC transporter TBD_RS11550 PF00392 Bacterial regulatory proteins, gntR family TBD_RS11550 PF07702 UTRA domain TBD_RS11555 PF05209 Septum formation inhibitor MinC, N-terminal domain TBD_RS11555 PF03775 Septum formation inhibitor MinC, C-terminal domain TBD_RS11560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TBD_RS11565 PF03776 Septum formation topological specificity factor MinE TBD_RS11585 PF00355 Rieske [2Fe-2S] domain TBD_RS11590 PF04324 BFD-like [2Fe-2S] binding domain TBD_RS11590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TBD_RS11590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TBD_RS11590 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS11590 PF18267 Rubredoxin NAD+ reductase C-terminal domain TBD_RS11595 PF01568 Molydopterin dinucleotide binding domain TBD_RS11595 PF00384 Molybdopterin oxidoreductase TBD_RS11595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TBD_RS11595 PF04324 BFD-like [2Fe-2S] binding domain TBD_RS11600 PF06628 Catalase-related immune-responsive TBD_RS11600 PF18011 C-terminal domain found in long catalases TBD_RS11600 PF00199 Catalase TBD_RS11605 PF00011 Hsp20/alpha crystallin family TBD_RS11610 PF01595 Cyclin M transmembrane N-terminal domain TBD_RS11610 PF03471 Transporter associated domain TBD_RS11610 PF00571 CBS domain TBD_RS11615 PF01242 6-pyruvoyl tetrahydropterin synthase TBD_RS11620 PF18113 Rubredoxin binding C-terminal domain TBD_RS11620 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS11625 PF00301 Rubredoxin TBD_RS11630 PF02915 Rubrerythrin TBD_RS11635 PF09335 SNARE associated Golgi protein TBD_RS11640 PF00873 AcrB/AcrD/AcrF family TBD_RS11645 PF13533 Biotin-lipoyl like TBD_RS11660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TBD_RS11660 PF03466 LysR substrate binding domain TBD_RS11665 PF02535 ZIP Zinc transporter TBD_RS11680 PF04358 DsrC like protein TBD_RS11685 PF03466 LysR substrate binding domain TBD_RS11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TBD_RS11690 PF00042 Globin TBD_RS11690 PF00970 Oxidoreductase FAD-binding domain TBD_RS11690 PF00175 Oxidoreductase NAD-binding domain TBD_RS11700 PF13098 Thioredoxin-like domain TBD_RS11700 PF10411 Disulfide bond isomerase protein N-terminus TBD_RS11705 PF01494 FAD binding domain TBD_RS11710 PF01494 FAD binding domain TBD_RS11715 PF05195 Aminopeptidase P, N-terminal domain TBD_RS11715 PF00557 Metallopeptidase family M24 TBD_RS11720 PF00483 Nucleotidyl transferase TBD_RS11725 PF01636 Phosphotransferase enzyme family TBD_RS11730 PF04453 LPS transport system D TBD_RS11735 PF09312 SurA N-terminal domain TBD_RS11735 PF00639 PPIC-type PPIASE domain TBD_RS11740 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TBD_RS11745 PF00398 Ribosomal RNA adenine dimethylase TBD_RS11750 PF00691 OmpA family TBD_RS11750 PF05736 OprF membrane domain TBD_RS11760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TBD_RS11770 PF01553 Acyltransferase TBD_RS11770 PF00501 AMP-binding enzyme TBD_RS11770 PF13193 AMP-binding enzyme C-terminal domain TBD_RS11780 PF05746 DALR anticodon binding domain TBD_RS11780 PF02092 Glycyl-tRNA synthetase beta subunit TBD_RS11785 PF02091 Glycyl-tRNA synthetase alpha subunit TBD_RS11790 PF00174 Oxidoreductase molybdopterin binding domain TBD_RS11800 PF12848 ABC transporter TBD_RS11800 PF00005 ABC transporter TBD_RS11805 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS11805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS11805 PF00672 HAMP domain TBD_RS11810 PF00072 Response regulator receiver domain TBD_RS11810 PF00486 Transcriptional regulatory protein, C terminal TBD_RS11830 PF00970 Oxidoreductase FAD-binding domain TBD_RS11830 PF00175 Oxidoreductase NAD-binding domain TBD_RS11835 PF01139 tRNA-splicing ligase RtcB TBD_RS11840 PF12627 Probable RNA and SrmB- binding site of polymerase A TBD_RS11840 PF01966 HD domain TBD_RS11840 PF01743 Poly A polymerase head domain TBD_RS11845 PF01370 NAD dependent epimerase/dehydratase family TBD_RS11850 PF01464 Transglycosylase SLT domain TBD_RS11850 PF14718 Soluble lytic murein transglycosylase L domain TBD_RS11855 PF00291 Pyridoxal-phosphate dependent enzyme TBD_RS11855 PF00585 C-terminal regulatory domain of Threonine dehydratase TBD_RS11860 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TBD_RS11865 PF03884 DNA gyrase inhibitor YacG TBD_RS11870 PF07072 Cell division protein TBD_RS11875 PF01121 Dephospho-CoA kinase TBD_RS11880 PF01478 Type IV leader peptidase family TBD_RS11880 PF06750 Bacterial Peptidase A24 N-terminal domain TBD_RS11885 PF00482 Type II secretion system (T2SS), protein F TBD_RS11890 PF00437 Type II/IV secretion system protein TBD_RS11890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TBD_RS11895 PF01595 Cyclin M transmembrane N-terminal domain TBD_RS11895 PF03471 Transporter associated domain TBD_RS11895 PF00571 CBS domain TBD_RS11900 PF01578 Cytochrome C assembly protein TBD_RS11905 PF02881 SRP54-type protein, helical bundle domain TBD_RS11905 PF02978 Signal peptide binding domain TBD_RS11905 PF00448 SRP54-type protein, GTPase domain TBD_RS11910 PF00886 Ribosomal protein S16 TBD_RS11915 PF01782 RimM N-terminal domain TBD_RS11915 PF05239 PRC-barrel domain TBD_RS11920 PF01746 tRNA (Guanine-1)-methyltransferase TBD_RS11925 PF01245 Ribosomal protein L19 TBD_RS11930 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TBD_RS11930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TBD_RS11935 PF02899 Phage integrase, N-terminal SAM-like domain TBD_RS11935 PF00589 Phage integrase family TBD_RS11955 PF02660 Glycerol-3-phosphate acyltransferase TBD_RS11965 PF00814 Glycoprotease family TBD_RS11970 PF01165 Ribosomal protein S21 TBD_RS11980 PF08275 DNA primase catalytic core, N-terminal domain TBD_RS11980 PF08278 DNA primase DnaG DnaB-binding TBD_RS11980 PF10410 DnaB-helicase binding domain of primase TBD_RS11980 PF01807 CHC2 zinc finger TBD_RS11985 PF04542 Sigma-70 region 2 TBD_RS11985 PF03979 Sigma-70 factor, region 1.1 TBD_RS11985 PF04545 Sigma-70, region 4 TBD_RS11985 PF00140 Sigma-70 factor, region 1.2 TBD_RS11985 PF04546 Sigma-70, non-essential region TBD_RS11985 PF04539 Sigma-70 region 3 TBD_RS11995 PF00440 Bacterial regulatory proteins, tetR family TBD_RS12000 PF00899 ThiF family TBD_RS12010 PF03572 Peptidase family S41 TBD_RS12010 PF13180 PDZ domain TBD_RS12015 PF01551 Peptidase family M23 TBD_RS12020 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TBD_RS12020 PF01676 Metalloenzyme superfamily TBD_RS12035 PF00873 AcrB/AcrD/AcrF family TBD_RS12045 PF00581 Rhodanese-like domain TBD_RS12050 PF00462 Glutaredoxin TBD_RS12055 PF00085 Thioredoxin TBD_RS12060 PF02556 Preprotein translocase subunit SecB TBD_RS12070 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TBD_RS12070 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TBD_RS12075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TBD_RS12075 PF08447 PAS fold TBD_RS12080 PF00588 SpoU rRNA Methylase family TBD_RS12090 PF02951 Prokaryotic glutathione synthetase, N-terminal domain TBD_RS12090 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain TBD_RS12100 PF02424 ApbE family TBD_RS12110 PF00381 PTS HPr component phosphorylation site TBD_RS12115 PF02896 PEP-utilising enzyme, TIM barrel domain TBD_RS12115 PF00391 PEP-utilising enzyme, mobile domain TBD_RS12115 PF05524 PEP-utilising enzyme, N-terminal TBD_RS12120 PF00350 Dynamin family TBD_RS12125 PF02325 YGGT family TBD_RS12130 PF03807 NADP oxidoreductase coenzyme F420-dependent TBD_RS12130 PF14748 Pyrroline-5-carboxylate reductase dimerisation TBD_RS12135 PF01168 Alanine racemase, N-terminal domain TBD_RS12140 PF00437 Type II/IV secretion system protein TBD_RS12145 PF00437 Type II/IV secretion system protein TBD_RS12165 PF02926 THUMP domain TBD_RS12165 PF01170 Putative RNA methylase family UPF0020 TBD_RS12170 PF03653 Uncharacterised protein family (UPF0093) TBD_RS12180 PF04102 SlyX TBD_RS12195 PF12848 ABC transporter TBD_RS12195 PF00005 ABC transporter TBD_RS12205 PF00578 AhpC/TSA family TBD_RS12205 PF02683 Cytochrome C biogenesis protein transmembrane region TBD_RS12205 PF17991 Thioredoxin like C-terminal domain TBD_RS12210 PF00132 Bacterial transferase hexapeptide (six repeats) TBD_RS12215 PF01432 Peptidase family M3 TBD_RS12235 PF10150 Ribonuclease E/G family TBD_RS12235 PF00575 S1 RNA binding domain TBD_RS12240 PF02545 Maf-like protein TBD_RS12245 PF02590 Predicted SPOUT methyltransferase TBD_RS12255 PF01467 Cytidylyltransferase-like TBD_RS12260 PF00171 Aldehyde dehydrogenase family TBD_RS12275 PF09334 tRNA synthetases class I (M) TBD_RS12275 PF08264 Anticodon-binding domain of tRNA TBD_RS12275 PF13603 Leucyl-tRNA synthetase, Domain 2 TBD_RS12275 PF00133 tRNA synthetases class I (I, L, M and V) TBD_RS12285 PF00485 Phosphoribulokinase / Uridine kinase family TBD_RS12295 PF13361 UvrD-like helicase C-terminal domain TBD_RS12295 PF00580 UvrD/REP helicase N-terminal domain TBD_RS12310 PF03641 Possible lysine decarboxylase TBD_RS12315 PF00476 DNA polymerase family A TBD_RS12315 PF01367 5'-3' exonuclease, C-terminal SAM fold TBD_RS12315 PF01612 3'-5' exonuclease TBD_RS12315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TBD_RS12320 PF00691 OmpA family TBD_RS12320 PF05736 OprF membrane domain TBD_RS12325 PF01741 Large-conductance mechanosensitive channel, MscL TBD_RS12330 PF01207 Dihydrouridine synthase (Dus) TBD_RS12335 PF02954 Bacterial regulatory protein, Fis family TBD_RS12340 PF02142 MGS-like domain TBD_RS12340 PF01808 AICARFT/IMPCHase bienzyme TBD_RS12345 PF02844 Phosphoribosylglycinamide synthetase, N domain TBD_RS12345 PF02843 Phosphoribosylglycinamide synthetase, C domain TBD_RS12345 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TBD_RS12350 PF01300 Telomere recombination TBD_RS12355 PF01218 Coproporphyrinogen III oxidase TBD_RS12365 PF00672 HAMP domain TBD_RS12365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS12365 PF07730 Histidine kinase TBD_RS12365 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term TBD_RS12370 PF00196 Bacterial regulatory proteins, luxR family TBD_RS12370 PF00072 Response regulator receiver domain TBD_RS12390 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TBD_RS12390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TBD_RS12390 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TBD_RS12390 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TBD_RS12390 PF10371 Domain of unknown function TBD_RS12395 PF02254 TrkA-N domain TBD_RS12395 PF00999 Sodium/hydrogen exchanger family TBD_RS12405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TBD_RS12405 PF14824 Sirohaem biosynthesis protein central TBD_RS12405 PF10414 Sirohaem synthase dimerisation region TBD_RS12415 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TBD_RS12415 PF07685 CobB/CobQ-like glutamine amidotransferase domain TBD_RS12425 PF13247 4Fe-4S dicluster domain TBD_RS12435 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS12435 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TBD_RS12435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TBD_RS12450 PF04358 DsrC like protein TBD_RS12455 PF04077 DsrH like protein TBD_RS12460 PF02635 DsrE/DsrF-like family TBD_RS12465 PF02635 DsrE/DsrF-like family TBD_RS12470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TBD_RS12470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TBD_RS12475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TBD_RS12475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TBD_RS12490 PF04358 DsrC like protein TBD_RS12495 PF00581 Rhodanese-like domain TBD_RS12510 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TBD_RS12510 PF01488 Shikimate / quinate 5-dehydrogenase TBD_RS12510 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TBD_RS12515 PF00472 RF-1 domain TBD_RS12515 PF03462 PCRF domain TBD_RS12520 PF17827 PrmC N-terminal domain TBD_RS12520 PF05175 Methyltransferase small domain TBD_RS12545 PF00462 Glutaredoxin TBD_RS12550 PF00158 Sigma-54 interaction domain TBD_RS12550 PF00072 Response regulator receiver domain TBD_RS12550 PF02954 Bacterial regulatory protein, Fis family TBD_RS12555 PF00989 PAS fold TBD_RS12555 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS12555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS12565 PF00120 Glutamine synthetase, catalytic domain TBD_RS12565 PF03951 Glutamine synthetase, beta-Grasp domain TBD_RS12570 PF01488 Shikimate / quinate 5-dehydrogenase TBD_RS12570 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TBD_RS12570 PF08501 Shikimate dehydrogenase substrate binding domain TBD_RS12575 PF00912 Transglycosylase TBD_RS12580 PF03448 MgtE intracellular N domain TBD_RS12580 PF01769 Divalent cation transporter TBD_RS12580 PF00571 CBS domain TBD_RS12585 PF00005 ABC transporter TBD_RS12585 PF00664 ABC transporter transmembrane region TBD_RS12590 PF01171 PP-loop family TBD_RS12595 PF00266 Aminotransferase class-V TBD_RS12635 PF02219 Methylenetetrahydrofolate reductase TBD_RS12645 PF05221 S-adenosyl-L-homocysteine hydrolase TBD_RS12645 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TBD_RS12650 PF01699 Sodium/calcium exchanger protein TBD_RS12655 PF02773 S-adenosylmethionine synthetase, C-terminal domain TBD_RS12655 PF02772 S-adenosylmethionine synthetase, central domain TBD_RS12655 PF00438 S-adenosylmethionine synthetase, N-terminal domain TBD_RS12665 PF03279 Bacterial lipid A biosynthesis acyltransferase TBD_RS12675 PF13380 CoA binding domain TBD_RS12680 PF01678 Diaminopimelate epimerase TBD_RS12690 PF02899 Phage integrase, N-terminal SAM-like domain TBD_RS12690 PF00589 Phage integrase family TBD_RS12695 PF03976 Polyphosphate kinase 2 (PPK2) TBD_RS12705 PF00873 AcrB/AcrD/AcrF family TBD_RS12710 PF13533 Biotin-lipoyl like TBD_RS12715 PF01258 Prokaryotic dksA/traR C4-type zinc finger TBD_RS12720 PF07683 Cobalamin synthesis protein cobW C-terminal domain TBD_RS12720 PF02492 CobW/HypB/UreG, nucleotide-binding domain TBD_RS12725 PF01809 Putative membrane protein insertion efficiency factor TBD_RS12745 PF00950 ABC 3 transport family TBD_RS12755 PF00227 Proteasome subunit TBD_RS12760 PF10431 C-terminal, D2-small domain, of ClpB protein TBD_RS12760 PF07724 AAA domain (Cdc48 subfamily) TBD_RS12760 PF00004 ATPase family associated with various cellular activities (AAA) TBD_RS12765 PF03350 Uncharacterized protein family, UPF0114 TBD_RS12790 PF01627 Hpt domain TBD_RS12790 PF01584 CheW-like domain TBD_RS12790 PF02895 Signal transducing histidine kinase, homodimeric domain TBD_RS12790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS12790 PF00072 Response regulator receiver domain TBD_RS12795 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term TBD_RS12795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TBD_RS12805 PF00072 Response regulator receiver domain TBD_RS12810 PF00072 Response regulator receiver domain TBD_RS12820 PF00301 Rubredoxin TBD_RS12825 PF08543 Phosphomethylpyrimidine kinase TBD_RS12830 PF02581 Thiamine monophosphate synthase TBD_RS12835 PF00202 Aminotransferase class-III TBD_RS12845 PF02683 Cytochrome C biogenesis protein transmembrane region TBD_RS12845 PF11412 Disulphide bond corrector protein DsbC TBD_RS12850 PF03091 CutA1 divalent ion tolerance protein TBD_RS12855 PF04186 FxsA cytoplasmic membrane protein TBD_RS12865 PF00175 Oxidoreductase NAD-binding domain TBD_RS12865 PF00111 2Fe-2S iron-sulfur cluster binding domain TBD_RS12865 PF00970 Oxidoreductase FAD-binding domain TBD_RS12880 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase TBD_RS12885 PF02602 Uroporphyrinogen-III synthase HemD TBD_RS12890 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TBD_RS12890 PF03900 Porphobilinogen deaminase, C-terminal domain TBD_RS12900 PF00072 Response regulator receiver domain TBD_RS12900 PF00196 Bacterial regulatory proteins, luxR family TBD_RS12905 PF00672 HAMP domain TBD_RS12905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS12905 PF00072 Response regulator receiver domain TBD_RS12905 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS12905 PF01627 Hpt domain TBD_RS12910 PF02875 Mur ligase family, glutamate ligase domain TBD_RS12910 PF01225 Mur ligase family, catalytic domain TBD_RS12910 PF08245 Mur ligase middle domain TBD_RS12915 PF05728 Uncharacterised protein family (UPF0227) TBD_RS12920 PF00575 S1 RNA binding domain TBD_RS12920 PF00773 RNB domain TBD_RS12920 PF08206 Ribonuclease B OB domain TBD_RS12920 PF17876 Cold shock domain TBD_RS12920 PF08461 Ribonuclease R winged-helix domain TBD_RS12930 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain TBD_RS12935 PF03707 Bacterial signalling protein N terminal repeat TBD_RS12935 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS12935 PF00563 EAL domain TBD_RS12940 PF02622 Uncharacterized ACR, COG1678 TBD_RS12945 PF03652 Holliday junction resolvase TBD_RS12950 PF00156 Phosphoribosyl transferase domain TBD_RS12955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TBD_RS12955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TBD_RS12960 PF01979 Amidohydrolase family TBD_RS12965 PF00795 Carbon-nitrogen hydrolase TBD_RS12970 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS12975 PF00692 dUTPase TBD_RS12980 PF02441 Flavoprotein TBD_RS12980 PF04127 DNA / pantothenate metabolism flavoprotein TBD_RS12985 PF04002 RadC-like JAB domain TBD_RS12990 PF00830 Ribosomal L28 family TBD_RS12995 PF00471 Ribosomal protein L33 TBD_RS13000 PF00593 TonB dependent receptor TBD_RS13000 PF07715 TonB-dependent Receptor Plug Domain TBD_RS13010 PF00027 Cyclic nucleotide-binding domain TBD_RS13010 PF00325 Bacterial regulatory proteins, crp family TBD_RS13020 PF12794 Mechanosensitive ion channel inner membrane domain 1 TBD_RS13020 PF12795 Mechanosensitive ion channel porin domain TBD_RS13020 PF00924 Mechanosensitive ion channel TBD_RS13025 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) TBD_RS13030 PF00501 AMP-binding enzyme TBD_RS13035 PF01189 16S rRNA methyltransferase RsmB/F TBD_RS13035 PF01029 NusB family TBD_RS13050 PF01594 AI-2E family transporter TBD_RS13055 PF03741 Integral membrane protein TerC family TBD_RS13060 PF01435 Peptidase family M48 TBD_RS13065 PF03466 LysR substrate binding domain TBD_RS13065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TBD_RS13075 PF00085 Thioredoxin TBD_RS13090 PF00916 Sulfate permease family TBD_RS13090 PF01740 STAS domain TBD_RS13095 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS13095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS13095 PF08521 Two-component sensor kinase N-terminal TBD_RS13100 PF00072 Response regulator receiver domain TBD_RS13100 PF00486 Transcriptional regulatory protein, C terminal TBD_RS13110 PF01925 Sulfite exporter TauE/SafE TBD_RS13115 PF00582 Universal stress protein family TBD_RS13120 PF00132 Bacterial transferase hexapeptide (six repeats) TBD_RS13125 PF01740 STAS domain TBD_RS13125 PF00916 Sulfate permease family TBD_RS13140 PF02594 Uncharacterised ACR, YggU family COG1872 TBD_RS13150 PF08406 CbbQ/NirQ/NorQ C-terminal TBD_RS13150 PF07728 AAA domain (dynein-related subfamily) TBD_RS13155 PF00101 Ribulose bisphosphate carboxylase, small chain TBD_RS13160 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TBD_RS13160 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TBD_RS13165 PF03466 LysR substrate binding domain TBD_RS13165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TBD_RS13170 PF00982 Glycosyltransferase family 20 TBD_RS13175 PF05116 Sucrose-6F-phosphate phosphohydrolase TBD_RS13175 PF00982 Glycosyltransferase family 20 TBD_RS13185 PF08496 Peptidase family S49 N-terminal TBD_RS13185 PF01343 Peptidase family S49 TBD_RS13195 PF01641 SelR domain TBD_RS13200 PF01625 Peptide methionine sulfoxide reductase TBD_RS13210 PF00563 EAL domain TBD_RS13210 PF01590 GAF domain TBD_RS13210 PF00360 Phytochrome region TBD_RS13210 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS13225 PF00092 von Willebrand factor type A domain TBD_RS13230 PF07728 AAA domain (dynein-related subfamily) TBD_RS13230 PF08406 CbbQ/NirQ/NorQ C-terminal TBD_RS13235 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TBD_RS13235 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TBD_RS13240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TBD_RS13240 PF03466 LysR substrate binding domain TBD_RS13245 PF00916 Sulfate permease family TBD_RS13245 PF01740 STAS domain TBD_RS13255 PF13614 AAA domain TBD_RS13260 PF01329 Pterin 4 alpha carbinolamine dehydratase TBD_RS13265 PF00210 Ferritin-like domain TBD_RS13270 PF00936 BMC domain TBD_RS13275 PF00936 BMC domain TBD_RS13280 PF00936 BMC domain TBD_RS13305 PF03466 LysR substrate binding domain TBD_RS13305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TBD_RS13315 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) TBD_RS13325 PF00361 Proton-conducting membrane transporter TBD_RS13325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TBD_RS13330 PF02417 Chromate transporter TBD_RS13340 PF04358 DsrC like protein TBD_RS13355 PF00731 AIR carboxylase TBD_RS13360 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain TBD_RS13360 PF02222 ATP-grasp domain TBD_RS13380 PF00551 Formyl transferase TBD_RS13385 PF02769 AIR synthase related protein, C-terminal domain TBD_RS13385 PF00586 AIR synthase related protein, N-terminal domain TBD_RS13390 PF01259 SAICAR synthetase TBD_RS13400 PF00072 Response regulator receiver domain TBD_RS13405 PF01627 Hpt domain TBD_RS13405 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS13405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS13405 PF00072 Response regulator receiver domain TBD_RS13410 PF00378 Enoyl-CoA hydratase/isomerase TBD_RS13415 PF01925 Sulfite exporter TauE/SafE TBD_RS13440 PF02384 N-6 DNA Methylase TBD_RS13445 PF00270 DEAD/DEAH box helicase TBD_RS13445 PF17191 RecG wedge domain TBD_RS13445 PF13749 Putative ATP-dependent DNA helicase recG C-terminal TBD_RS13450 PF01420 Type I restriction modification DNA specificity domain TBD_RS13460 PF00696 Amino acid kinase family TBD_RS13470 PF00593 TonB dependent receptor TBD_RS13470 PF07715 TonB-dependent Receptor Plug Domain TBD_RS13480 PF00072 Response regulator receiver domain TBD_RS13480 PF02954 Bacterial regulatory protein, Fis family TBD_RS13490 PF02673 Bacitracin resistance protein BacA TBD_RS13495 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS13495 PF08448 PAS fold TBD_RS13500 PF13667 ThiC-associated domain TBD_RS13500 PF01964 Radical SAM ThiC family TBD_RS13510 PF00581 Rhodanese-like domain TBD_RS13515 PF02321 Outer membrane efflux protein TBD_RS13520 PF00534 Glycosyl transferases group 1 TBD_RS13520 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) TBD_RS13525 PF01370 NAD dependent epimerase/dehydratase family TBD_RS13545 PF00571 CBS domain TBD_RS13545 PF03471 Transporter associated domain TBD_RS13550 PF02130 Uncharacterized protein family UPF0054 TBD_RS13555 PF02562 PhoH-like protein TBD_RS13560 PF01938 TRAM domain TBD_RS13560 PF04055 Radical SAM superfamily TBD_RS13560 PF00919 Uncharacterized protein family UPF0004 TBD_RS13570 PF03006 Haemolysin-III related TBD_RS13580 PF00749 tRNA synthetases class I (E and Q), catalytic domain TBD_RS13585 PF02654 Cobalamin-5-phosphate synthase TBD_RS13595 PF02277 Phosphoribosyltransferase TBD_RS13600 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TBD_RS13605 PF07685 CobB/CobQ-like glutamine amidotransferase domain TBD_RS13605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TBD_RS13610 PF00155 Aminotransferase class I and II TBD_RS13615 PF17113 Regulatory signalling modulator protein AmpE TBD_RS13615 PF03186 CobD/Cbib protein TBD_RS13620 PF00881 Nitroreductase family TBD_RS13625 PF12557 Cob(I)alamin adenosyltransferase N terminal TBD_RS13625 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TBD_RS13635 PF07715 TonB-dependent Receptor Plug Domain TBD_RS13635 PF00593 TonB dependent receptor TBD_RS13645 PF05164 Cell division protein ZapA TBD_RS13650 PF01812 5-formyltetrahydrofolate cyclo-ligase family TBD_RS13655 PF01235 Sodium:alanine symporter family TBD_RS13665 PF03190 Protein of unknown function, DUF255 TBD_RS13675 PF13614 AAA domain TBD_RS13680 PF00920 Dehydratase family TBD_RS13685 PF01790 Prolipoprotein diacylglyceryl transferase TBD_RS13705 PF07690 Major Facilitator Superfamily TBD_RS13715 PF01925 Sulfite exporter TauE/SafE TBD_RS13720 PF00581 Rhodanese-like domain TBD_RS13725 PF07690 Major Facilitator Superfamily TBD_RS13730 PF00753 Metallo-beta-lactamase superfamily TBD_RS13730 PF00581 Rhodanese-like domain TBD_RS13775 PF07977 FabA-like domain TBD_RS13795 PF00457 Glycosyl hydrolases family 11 TBD_RS13795 PF03422 Carbohydrate binding module (family 6) TBD_RS13795 PF01522 Polysaccharide deacetylase TBD_RS13805 PF00109 Beta-ketoacyl synthase, N-terminal domain TBD_RS13805 PF02801 Beta-ketoacyl synthase, C-terminal domain TBD_RS13825 PF00999 Sodium/hydrogen exchanger family TBD_RS13830 PF01209 ubiE/COQ5 methyltransferase family TBD_RS13855 PF04820 Tryptophan halogenase TBD_RS13860 PF04239 Protein of unknown function (DUF421) TBD_RS13875 PF04898 Glutamate synthase central domain TBD_RS13875 PF01645 Conserved region in glutamate synthase TBD_RS13875 PF00310 Glutamine amidotransferases class-II TBD_RS13875 PF01493 GXGXG motif TBD_RS13880 PF07992 Pyridine nucleotide-disulphide oxidoreductase TBD_RS13880 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TBD_RS13885 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS13885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS13895 PF00158 Sigma-54 interaction domain TBD_RS13895 PF00072 Response regulator receiver domain TBD_RS13930 PF01208 Uroporphyrinogen decarboxylase (URO-D) TBD_RS13940 PF17764 3′ DNA-binding domain (3′BD) TBD_RS13940 PF18074 Primosomal protein N C-terminal domain TBD_RS13940 PF00270 DEAD/DEAH box helicase TBD_RS13940 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TBD_RS13940 PF00271 Helicase conserved C-terminal domain TBD_RS13945 PF05746 DALR anticodon binding domain TBD_RS13945 PF03485 Arginyl tRNA synthetase N terminal domain TBD_RS13945 PF00750 tRNA synthetases class I (R) TBD_RS13955 PF13462 Thioredoxin TBD_RS13960 PF00106 short chain dehydrogenase TBD_RS13965 PF00072 Response regulator receiver domain TBD_RS13965 PF00196 Bacterial regulatory proteins, luxR family TBD_RS13970 PF13098 Thioredoxin-like domain TBD_RS13975 PF00578 AhpC/TSA family TBD_RS13980 PF08534 Redoxin TBD_RS13985 PF02683 Cytochrome C biogenesis protein transmembrane region TBD_RS13985 PF11412 Disulphide bond corrector protein DsbC TBD_RS13990 PF00486 Transcriptional regulatory protein, C terminal TBD_RS13990 PF00072 Response regulator receiver domain TBD_RS13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS13995 PF00512 His Kinase A (phospho-acceptor) domain TBD_RS13995 PF08521 Two-component sensor kinase N-terminal TBD_RS14000 PF01380 SIS domain TBD_RS14005 PF00132 Bacterial transferase hexapeptide (six repeats) TBD_RS14005 PF12804 MobA-like NTP transferase domain TBD_RS14005 PF14602 Hexapeptide repeat of succinyl-transferase TBD_RS14010 PF00691 OmpA family TBD_RS14010 PF00223 Photosystem I psaA/psaB protein TBD_RS14015 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TBD_RS14015 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TBD_RS14020 PF02874 ATP synthase alpha/beta family, beta-barrel domain TBD_RS14020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TBD_RS14025 PF00231 ATP synthase TBD_RS14030 PF00306 ATP synthase alpha/beta chain, C terminal domain TBD_RS14030 PF02874 ATP synthase alpha/beta family, beta-barrel domain TBD_RS14030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TBD_RS14035 PF00213 ATP synthase delta (OSCP) subunit TBD_RS14040 PF00430 ATP synthase B/B' CF(0) TBD_RS14045 PF00137 ATP synthase subunit C TBD_RS14050 PF00119 ATP synthase A chain TBD_RS14060 PF17762 HTH domain found in ParB protein TBD_RS14060 PF02195 ParB-like nuclease domain TBD_RS14065 PF13614 AAA domain TBD_RS14070 PF02527 rRNA small subunit methyltransferase G TBD_RS14075 PF13932 GidA associated domain TBD_RS14075 PF01134 Glucose inhibited division protein A TBD_RS14085 PF00005 ABC transporter TBD_RS14085 PF12848 ABC transporter TBD_RS14085 PF16326 ABC transporter C-terminal domain TBD_RS14090 PF03746 LamB/YcsF family TBD_RS14095 PF02626 Carboxyltransferase domain, subdomain A and B TBD_RS14100 PF02682 Carboxyltransferase domain, subdomain C and D TBD_RS14105 PF08448 PAS fold TBD_RS14105 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS14110 PF00270 DEAD/DEAH box helicase TBD_RS14110 PF00271 Helicase conserved C-terminal domain TBD_RS14115 PF00005 ABC transporter TBD_RS14115 PF00664 ABC transporter transmembrane region TBD_RS14125 PF13362 Toprim domain TBD_RS14125 PF18818 Metallopeptidase superfamily domain TBD_RS14125 PF08401 Domain of unknown function (DUF1738) TBD_RS14130 PF13356 Arm DNA-binding domain TBD_RS14130 PF00589 Phage integrase family TBD_RS14135 PF12631 MnmE helical domain TBD_RS14135 PF01926 50S ribosome-binding GTPase TBD_RS14135 PF10396 GTP-binding protein TrmE N-terminus TBD_RS14140 PF14849 YidC periplasmic domain TBD_RS14140 PF02096 60Kd inner membrane protein TBD_RS14145 PF00825 Ribonuclease P TBD_RS14150 PF00468 Ribosomal protein L34 TBD_RS14180 PF04205 FMN-binding domain TBD_RS14180 PF12801 4Fe-4S binding domain TBD_RS14205 PF08241 Methyltransferase domain TBD_RS14210 PF00563 EAL domain TBD_RS14210 PF03707 Bacterial signalling protein N terminal repeat TBD_RS14210 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS14215 PF04264 YceI-like domain TBD_RS14225 PF00360 Phytochrome region TBD_RS14225 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS14225 PF01590 GAF domain TBD_RS14225 PF00563 EAL domain TBD_RS14230 PF05231 MASE1 TBD_RS14230 PF07730 Histidine kinase TBD_RS14230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBD_RS14245 PF02694 Uncharacterised BCR, YnfA/UPF0060 family TBD_RS14265 PF00563 EAL domain TBD_RS14265 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS14265 PF03707 Bacterial signalling protein N terminal repeat TBD_RS14265 PF13188 PAS domain TBD_RS14295 PF17841 BID domain of Bartonella effector protein (Bep) TBD_RS14295 PF03389 MobA/MobL family TBD_RS14295 PF01443 Viral (Superfamily 1) RNA helicase TBD_RS14300 PF00535 Glycosyl transferase family 2 TBD_RS14315 PF07963 Prokaryotic N-terminal methylation motif TBD_RS14315 PF00114 Pilin (bacterial filament) TBD_RS14330 PF00684 DnaJ central domain TBD_RS14330 PF01556 DnaJ C terminal domain TBD_RS14330 PF00226 DnaJ domain TBD_RS14355 PF00990 Diguanylate cyclase, GGDEF domain TBD_RS14355 PF03707 Bacterial signalling protein N terminal repeat TBD_RS14355 PF00563 EAL domain