locus-tag class description LT988_RS00010 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LT988_RS00015 PF06100 MCRA family LT988_RS00020 PF03150 Di-haem cytochrome c peroxidase LT988_RS00020 PF00034 Cytochrome c LT988_RS00020 PF14376 Haem-binding domain LT988_RS00055 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LT988_RS00055 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LT988_RS00060 PF00999 Sodium/hydrogen exchanger family LT988_RS00065 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LT988_RS00090 PF13533 Biotin-lipoyl like LT988_RS00095 PF00005 ABC transporter LT988_RS00110 PF00011 Hsp20/alpha crystallin family LT988_RS00120 PF00300 Histidine phosphatase superfamily (branch 1) LT988_RS00125 PF06100 MCRA family LT988_RS00130 PF03358 NADPH-dependent FMN reductase LT988_RS00140 PF01556 DnaJ C terminal domain LT988_RS00140 PF00226 DnaJ domain LT988_RS00190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LT988_RS00200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LT988_RS00210 PF00890 FAD binding domain LT988_RS00215 PF13187 4Fe-4S dicluster domain LT988_RS00215 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit LT988_RS00230 PF09335 SNARE associated Golgi protein LT988_RS00250 PF03190 Protein of unknown function, DUF255 LT988_RS00255 PF05114 Protein of unknown function (DUF692) LT988_RS00270 PF03306 Alpha-acetolactate decarboxylase LT988_RS00305 PF00141 Peroxidase LT988_RS00325 PF00485 Phosphoribulokinase / Uridine kinase family LT988_RS00350 PF13190 PDGLE domain LT988_RS00350 PF01891 Cobalt uptake substrate-specific transmembrane region LT988_RS00360 PF00005 ABC transporter LT988_RS00385 PF13005 zinc-finger binding domain of transposase IS66 LT988_RS00385 PF13007 Transposase C of IS166 homeodomain LT988_RS00385 PF13817 IS66 C-terminal element LT988_RS00385 PF03050 Transposase IS66 family LT988_RS00390 PF11799 impB/mucB/samB family C-terminal domain LT988_RS00390 PF00817 impB/mucB/samB family LT988_RS00390 PF11798 IMS family HHH motif LT988_RS00400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LT988_RS00415 PF03205 Molybdopterin guanine dinucleotide synthesis protein B LT988_RS00420 PF00005 ABC transporter LT988_RS00420 PF12848 ABC transporter LT988_RS00425 PF00563 EAL domain LT988_RS00425 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS00425 PF08448 PAS fold LT988_RS00435 PF03625 Domain of unknown function DUF302 LT988_RS00435 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LT988_RS00445 PF00924 Mechanosensitive ion channel LT988_RS00455 PF07722 Peptidase C26 LT988_RS00460 PF01734 Patatin-like phospholipase LT988_RS00465 PF00578 AhpC/TSA family LT988_RS00475 PF03969 AFG1-like ATPase LT988_RS00480 PF00155 Aminotransferase class I and II LT988_RS00485 PF13419 Haloacid dehalogenase-like hydrolase LT988_RS00490 PF01322 Cytochrome C' LT988_RS00520 PF00027 Cyclic nucleotide-binding domain LT988_RS00520 PF04960 Glutaminase LT988_RS00520 PF01740 STAS domain LT988_RS00525 PF08241 Methyltransferase domain LT988_RS00530 PF00156 Phosphoribosyl transferase domain LT988_RS00535 PF06968 Biotin and Thiamin Synthesis associated domain LT988_RS00535 PF04055 Radical SAM superfamily LT988_RS00545 PF00152 tRNA synthetases class II (D, K and N) LT988_RS00550 PF09285 Elongation factor P, C-terminal LT988_RS00550 PF01132 Elongation factor P (EF-P) OB domain LT988_RS00550 PF08207 Elongation factor P (EF-P) KOW-like domain LT988_RS00555 PF04055 Radical SAM superfamily LT988_RS00575 PF13614 AAA domain LT988_RS00590 PF00873 AcrB/AcrD/AcrF family LT988_RS00605 PF02445 Quinolinate synthetase A protein LT988_RS00610 PF03264 NapC/NirT cytochrome c family, N-terminal region LT988_RS00625 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding LT988_RS00625 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS00625 PF10518 TAT (twin-arginine translocation) pathway signal sequence LT988_RS00650 PF03334 Na+/H+ antiporter subunit LT988_RS00665 PF00361 Proton-conducting membrane transporter LT988_RS00670 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LT988_RS00670 PF00361 Proton-conducting membrane transporter LT988_RS00675 PF00361 Proton-conducting membrane transporter LT988_RS00745 PF10431 C-terminal, D2-small domain, of ClpB protein LT988_RS00745 PF02861 Clp amino terminal domain, pathogenicity island component LT988_RS00745 PF17871 AAA lid domain LT988_RS00745 PF07724 AAA domain (Cdc48 subfamily) LT988_RS00745 PF00004 ATPase family associated with various cellular activities (AAA) LT988_RS00750 PF03466 LysR substrate binding domain LT988_RS00750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT988_RS00770 PF00176 SNF2 family N-terminal domain LT988_RS00770 PF00271 Helicase conserved C-terminal domain LT988_RS00770 PF12419 SNF2 Helicase protein LT988_RS00780 PF00682 HMGL-like LT988_RS00780 PF08502 LeuA allosteric (dimerisation) domain LT988_RS00785 PF01037 Lrp/AsnC ligand binding domain LT988_RS00800 PF01594 AI-2E family transporter LT988_RS00815 PF00563 EAL domain LT988_RS00815 PF03707 Bacterial signalling protein N terminal repeat LT988_RS00815 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS00820 PF01627 Hpt domain LT988_RS00820 PF00072 Response regulator receiver domain LT988_RS00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS00820 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS00825 PF02464 Competence-damaged protein LT988_RS00825 PF18146 Damage-inducible protein CinA KH domain LT988_RS00825 PF00994 Probable molybdopterin binding domain LT988_RS00830 PF00013 KH domain LT988_RS00830 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LT988_RS00830 PF01138 3' exoribonuclease family, domain 1 LT988_RS00830 PF03725 3' exoribonuclease family, domain 2 LT988_RS00830 PF00575 S1 RNA binding domain LT988_RS00835 PF00312 Ribosomal protein S15 LT988_RS00840 PF09157 Pseudouridine synthase II TruB, C-terminal LT988_RS00840 PF16198 tRNA pseudouridylate synthase B C-terminal domain LT988_RS00840 PF01509 TruB family pseudouridylate synthase (N terminal domain) LT988_RS00845 PF02033 Ribosome-binding factor A LT988_RS00850 PF00009 Elongation factor Tu GTP binding domain LT988_RS00850 PF03144 Elongation factor Tu domain 2 LT988_RS00850 PF11987 Translation-initiation factor 2 LT988_RS00850 PF08364 Bacterial translation initiation factor IF-2 associated region LT988_RS00850 PF04760 Translation initiation factor IF-2, N-terminal region LT988_RS00855 PF13184 NusA-like KH domain LT988_RS00855 PF08529 NusA N-terminal domain LT988_RS00855 PF00575 S1 RNA binding domain LT988_RS00860 PF02576 RimP N-terminal domain LT988_RS00860 PF17384 RimP C-terminal SH3 domain LT988_RS00865 PF17283 SprT-like zinc ribbon domain LT988_RS00865 PF10263 SprT-like family LT988_RS00875 PF01048 Phosphorylase superfamily LT988_RS00885 PF00156 Phosphoribosyl transferase domain LT988_RS00890 PF00933 Glycosyl hydrolase family 3 N terminal domain LT988_RS00905 PF00004 ATPase family associated with various cellular activities (AAA) LT988_RS00905 PF17862 AAA+ lid domain LT988_RS00905 PF06480 FtsH Extracellular LT988_RS00905 PF01434 Peptidase family M41 LT988_RS00910 PF02545 Maf-like protein LT988_RS00915 PF01551 Peptidase family M23 LT988_RS00915 PF10145 Phage-related minor tail protein LT988_RS00915 PF01464 Transglycosylase SLT domain LT988_RS00920 PF04193 PQ loop repeat LT988_RS00925 PF00583 Acetyltransferase (GNAT) family LT988_RS00925 PF13380 CoA binding domain LT988_RS00925 PF13607 Succinyl-CoA ligase like flavodoxin domain LT988_RS00930 PF00850 Histone deacetylase domain LT988_RS00935 PF01738 Dienelactone hydrolase family LT988_RS00940 PF03441 FAD binding domain of DNA photolyase LT988_RS00940 PF00875 DNA photolyase LT988_RS00945 PF01026 TatD related DNase LT988_RS00955 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LT988_RS00970 PF00753 Metallo-beta-lactamase superfamily LT988_RS00985 PF00717 Peptidase S24-like LT988_RS00985 PF01726 LexA DNA binding domain LT988_RS00995 PF01336 OB-fold nucleic acid binding domain LT988_RS00995 PF00152 tRNA synthetases class II (D, K and N) LT988_RS01025 PF00224 Pyruvate kinase, barrel domain LT988_RS01025 PF02887 Pyruvate kinase, alpha/beta domain LT988_RS01060 PF00291 Pyridoxal-phosphate dependent enzyme LT988_RS01065 PF04231 Endonuclease I LT988_RS01130 PF01066 CDP-alcohol phosphatidyltransferase LT988_RS01135 PF00586 AIR synthase related protein, N-terminal domain LT988_RS01135 PF02769 AIR synthase related protein, C-terminal domain LT988_RS01140 PF00551 Formyl transferase LT988_RS01165 PF00149 Calcineurin-like phosphoesterase LT988_RS01175 PF01430 Hsp33 protein LT988_RS01180 PF07670 Nucleoside recognition LT988_RS01180 PF07662 Na+ dependent nucleoside transporter C-terminus LT988_RS01180 PF01773 Na+ dependent nucleoside transporter N-terminus LT988_RS01200 PF17176 tRNA-binding domain LT988_RS01200 PF05127 Helicase LT988_RS01200 PF13718 GNAT acetyltransferase 2 LT988_RS01200 PF08351 Domain of unknown function (DUF1726) LT988_RS01205 PF00293 NUDIX domain LT988_RS01210 PF04337 Protein of unknown function, DUF480 LT988_RS01220 PF01027 Inhibitor of apoptosis-promoting Bax1 LT988_RS01240 PF00375 Sodium:dicarboxylate symporter family LT988_RS01250 PF10396 GTP-binding protein TrmE N-terminus LT988_RS01250 PF12631 MnmE helical domain LT988_RS01250 PF01926 50S ribosome-binding GTPase LT988_RS01255 PF13167 GTP-binding GTPase N-terminal LT988_RS01255 PF16360 GTP-binding GTPase Middle Region LT988_RS01255 PF01926 50S ribosome-binding GTPase LT988_RS01260 PF00768 D-alanyl-D-alanine carboxypeptidase LT988_RS01265 PF03006 Haemolysin-III related LT988_RS01270 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LT988_RS01285 PF07690 Major Facilitator Superfamily LT988_RS01305 PF00171 Aldehyde dehydrogenase family LT988_RS01305 PF01619 Proline dehydrogenase LT988_RS01305 PF14850 DNA-binding domain of Proline dehydrogenase LT988_RS01305 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LT988_RS01310 PF00171 Aldehyde dehydrogenase family LT988_RS01310 PF01619 Proline dehydrogenase LT988_RS01310 PF14850 DNA-binding domain of Proline dehydrogenase LT988_RS01310 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LT988_RS01325 PF11897 Protein of unknown function (DUF3417) LT988_RS01325 PF00343 Carbohydrate phosphorylase LT988_RS01330 PF12627 Probable RNA and SrmB- binding site of polymerase A LT988_RS01330 PF01743 Poly A polymerase head domain LT988_RS01330 PF01966 HD domain LT988_RS01355 PF01844 HNH endonuclease LT988_RS01360 PF00582 Universal stress protein family LT988_RS01365 PF04608 Phosphatidylglycerophosphatase A LT988_RS01370 PF00586 AIR synthase related protein, N-terminal domain LT988_RS01370 PF02769 AIR synthase related protein, C-terminal domain LT988_RS01375 PF01029 NusB family LT988_RS01380 PF00885 6,7-dimethyl-8-ribityllumazine synthase LT988_RS01385 PF00925 GTP cyclohydrolase II LT988_RS01385 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LT988_RS01390 PF00677 Lumazine binding domain LT988_RS01395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LT988_RS01395 PF01872 RibD C-terminal domain LT988_RS01400 PF03477 ATP cone domain LT988_RS01405 PF00464 Serine hydroxymethyltransferase LT988_RS01425 PF00106 short chain dehydrogenase LT988_RS01430 PF00155 Aminotransferase class I and II LT988_RS01435 PF00561 alpha/beta hydrolase fold LT988_RS01440 PF08241 Methyltransferase domain LT988_RS01450 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LT988_RS01455 PF00595 PDZ domain LT988_RS01460 PF00005 ABC transporter LT988_RS01465 PF01061 ABC-2 type transporter LT988_RS01470 PF00578 AhpC/TSA family LT988_RS01480 PF00772 DnaB-like helicase N terminal domain LT988_RS01480 PF03796 DnaB-like helicase C terminal domain LT988_RS01485 PF03948 Ribosomal protein L9, C-terminal domain LT988_RS01485 PF01281 Ribosomal protein L9, N-terminal domain LT988_RS01495 PF01084 Ribosomal protein S18 LT988_RS01500 PF01250 Ribosomal protein S6 LT988_RS01510 PF01757 Acyltransferase family LT988_RS01525 PF13307 Helicase C-terminal domain LT988_RS01525 PF04851 Type III restriction enzyme, res subunit LT988_RS01535 PF00912 Transglycosylase LT988_RS01535 PF00905 Penicillin binding protein transpeptidase domain LT988_RS01535 PF14814 Bifunctional transglycosylase second domain LT988_RS01540 PF01061 ABC-2 type transporter LT988_RS01545 PF00005 ABC transporter LT988_RS01550 PF01925 Sulfite exporter TauE/SafE LT988_RS01560 PF04273 Putative phosphatase (DUF442) LT988_RS01560 PF00753 Metallo-beta-lactamase superfamily LT988_RS01570 PF05188 MutS domain II LT988_RS01570 PF00488 MutS domain V LT988_RS01570 PF05192 MutS domain III LT988_RS01570 PF01624 MutS domain I LT988_RS01570 PF05190 MutS family domain IV LT988_RS01580 PF10411 Disulfide bond isomerase protein N-terminus LT988_RS01580 PF13098 Thioredoxin-like domain LT988_RS01585 PF04461 Protein of unknown function (DUF520) LT988_RS01590 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS01590 PF00589 Phage integrase family LT988_RS01600 PF03692 Putative zinc- or iron-chelating domain LT988_RS01605 PF08443 RimK-like ATP-grasp domain LT988_RS01605 PF18030 RimK PreATP-grasp domain LT988_RS01610 PF01136 Peptidase family U32 LT988_RS01610 PF16325 Peptidase family U32 C-terminal domain LT988_RS01615 PF13180 PDZ domain LT988_RS01615 PF02163 Peptidase family M50 LT988_RS01625 PF00128 Alpha amylase, catalytic domain LT988_RS01625 PF03423 Carbohydrate binding domain (family 25) LT988_RS01625 PF01373 Glycosyl hydrolase family 14 LT988_RS01630 PF01594 AI-2E family transporter LT988_RS01635 PF13640 2OG-Fe(II) oxygenase superfamily LT988_RS01635 PF18331 PKHD-type hydroxylase C-terminal domain LT988_RS01650 PF03600 Citrate transporter LT988_RS01650 PF02080 TrkA-C domain LT988_RS01655 PF03411 Penicillin-insensitive murein endopeptidase LT988_RS01670 PF00892 EamA-like transporter family LT988_RS01690 PF00005 ABC transporter LT988_RS01695 PF03379 CcmB protein LT988_RS01700 PF01578 Cytochrome C assembly protein LT988_RS01710 PF03100 CcmE LT988_RS01715 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LT988_RS01715 PF01578 Cytochrome C assembly protein LT988_RS01720 PF08534 Redoxin LT988_RS01725 PF03918 Cytochrome C biogenesis protein LT988_RS01735 PF01161 Phosphatidylethanolamine-binding protein LT988_RS01740 PF00679 Elongation factor G C-terminus LT988_RS01740 PF03764 Elongation factor G, domain IV LT988_RS01740 PF00009 Elongation factor Tu GTP binding domain LT988_RS01740 PF03144 Elongation factor Tu domain 2 LT988_RS01740 PF14492 Elongation Factor G, domain II LT988_RS01755 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LT988_RS01755 PF11867 Domain of unknown function (DUF3387) LT988_RS01755 PF18766 SWI2/SNF2 ATPase LT988_RS01770 PF02661 Fic/DOC family LT988_RS01825 PF01435 Peptidase family M48 LT988_RS01835 PF05173 Dihydrodipicolinate reductase, C-terminus LT988_RS01835 PF01113 Dihydrodipicolinate reductase, N-terminus LT988_RS01840 PF00226 DnaJ domain LT988_RS01840 PF01556 DnaJ C terminal domain LT988_RS01840 PF00684 DnaJ central domain LT988_RS01845 PF00012 Hsp70 protein LT988_RS01850 PF01025 GrpE LT988_RS01855 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LT988_RS01855 PF01628 HrcA protein C terminal domain LT988_RS01860 PF01513 ATP-NAD kinase LT988_RS01865 PF02463 RecF/RecN/SMC N terminal domain LT988_RS01870 PF01548 Transposase LT988_RS01870 PF02371 Transposase IS116/IS110/IS902 family LT988_RS01875 PF01370 NAD dependent epimerase/dehydratase family LT988_RS01880 PF10503 Esterase PHB depolymerase LT988_RS01885 PF04381 Putative exonuclease, RdgC LT988_RS01890 PF03471 Transporter associated domain LT988_RS01890 PF00571 CBS domain LT988_RS01890 PF01595 Cyclin M transmembrane N-terminal domain LT988_RS01895 PF18073 Rubredoxin metal binding domain LT988_RS01910 PF05661 Protein of unknown function (DUF808) LT988_RS01935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LT988_RS01940 PF00582 Universal stress protein family LT988_RS01955 PF04172 LrgB-like family LT988_RS01960 PF03788 LrgA family LT988_RS01965 PF05343 M42 glutamyl aminopeptidase LT988_RS01970 PF02875 Mur ligase family, glutamate ligase domain LT988_RS01970 PF08245 Mur ligase middle domain LT988_RS01970 PF08443 RimK-like ATP-grasp domain LT988_RS01975 PF00733 Asparagine synthase LT988_RS01975 PF13537 Glutamine amidotransferase domain LT988_RS01980 PF01227 GTP cyclohydrolase I LT988_RS01985 PF00793 DAHP synthetase I family LT988_RS02020 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LT988_RS02065 PF00114 Pilin (bacterial filament) LT988_RS02065 PF07963 Prokaryotic N-terminal methylation motif LT988_RS02085 PF00535 Glycosyl transferase family 2 LT988_RS02090 PF13439 Glycosyltransferase Family 4 LT988_RS02105 PF13847 Methyltransferase domain LT988_RS02110 PF13439 Glycosyltransferase Family 4 LT988_RS02110 PF00534 Glycosyl transferases group 1 LT988_RS02135 PF13401 AAA domain LT988_RS02135 PF01471 Putative peptidoglycan binding domain LT988_RS02155 PF13439 Glycosyltransferase Family 4 LT988_RS02185 PF07804 HipA-like C-terminal domain LT988_RS02200 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB LT988_RS02215 PF01850 PIN domain LT988_RS02250 PF01850 PIN domain LT988_RS02265 PF07963 Prokaryotic N-terminal methylation motif LT988_RS02265 PF00114 Pilin (bacterial filament) LT988_RS02275 PF01813 ATP synthase subunit D LT988_RS02280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT988_RS02280 PF02874 ATP synthase alpha/beta family, beta-barrel domain LT988_RS02285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT988_RS02285 PF02874 ATP synthase alpha/beta family, beta-barrel domain LT988_RS02285 PF16886 ATPsynthase alpha/beta subunit N-term extension LT988_RS02305 PF01496 V-type ATPase 116kDa subunit family LT988_RS02330 PF01496 V-type ATPase 116kDa subunit family LT988_RS02335 PF00137 ATP synthase subunit C LT988_RS02345 PF01991 ATP synthase (E/31 kDa) subunit LT988_RS02350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT988_RS02350 PF02874 ATP synthase alpha/beta family, beta-barrel domain LT988_RS02350 PF16886 ATPsynthase alpha/beta subunit N-term extension LT988_RS02355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT988_RS02380 PF01242 6-pyruvoyl tetrahydropterin synthase LT988_RS02385 PF06508 Queuosine biosynthesis protein QueC LT988_RS02395 PF00556 Antenna complex alpha/beta subunit LT988_RS02400 PF00556 Antenna complex alpha/beta subunit LT988_RS02410 PF00556 Antenna complex alpha/beta subunit LT988_RS02415 PF00266 Aminotransferase class-V LT988_RS02420 PF08323 Starch synthase catalytic domain LT988_RS02420 PF00534 Glycosyl transferases group 1 LT988_RS02425 PF00749 tRNA synthetases class I (E and Q), catalytic domain LT988_RS02430 PF04430 Protein of unknown function (DUF498/DUF598) LT988_RS02445 PF00005 ABC transporter LT988_RS02450 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS02460 PF01751 Toprim domain LT988_RS02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS02460 PF00986 DNA gyrase B subunit, carboxyl terminus LT988_RS02460 PF00204 DNA gyrase B LT988_RS02475 PF02609 Exonuclease VII small subunit LT988_RS02480 PF00348 Polyprenyl synthetase LT988_RS02485 PF02649 Type I GTP cyclohydrolase folE2 LT988_RS02510 PF01813 ATP synthase subunit D LT988_RS02525 PF00899 ThiF family LT988_RS02530 PF00166 Chaperonin 10 Kd subunit LT988_RS02535 PF00118 TCP-1/cpn60 chaperonin family LT988_RS02560 PF00690 Cation transporter/ATPase, N-terminus LT988_RS02560 PF00689 Cation transporting ATPase, C-terminus LT988_RS02565 PF03099 Biotin/lipoate A/B protein ligase family LT988_RS02565 PF12706 Beta-lactamase superfamily domain LT988_RS02570 PF06804 NlpB/DapX lipoprotein LT988_RS02575 PF00701 Dihydrodipicolinate synthetase family LT988_RS02580 PF00361 Proton-conducting membrane transporter LT988_RS02585 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LT988_RS02585 PF00361 Proton-conducting membrane transporter LT988_RS02590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LT988_RS02590 PF00361 Proton-conducting membrane transporter LT988_RS02595 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LT988_RS02600 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LT988_RS02605 PF12838 4Fe-4S dicluster domain LT988_RS02610 PF00146 NADH dehydrogenase LT988_RS02615 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LT988_RS02615 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LT988_RS02615 PF00384 Molybdopterin oxidoreductase LT988_RS02620 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LT988_RS02620 PF10531 SLBB domain LT988_RS02620 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LT988_RS02630 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LT988_RS02635 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LT988_RS02640 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LT988_RS02645 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LT988_RS02655 PF03840 Preprotein translocase SecG subunit LT988_RS02660 PF00121 Triosephosphate isomerase LT988_RS02665 PF01668 SmpB protein LT988_RS02705 PF11855 Protein of unknown function (DUF3375) LT988_RS02735 PF02779 Transketolase, pyrimidine binding domain LT988_RS02735 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LT988_RS02735 PF02780 Transketolase, C-terminal domain LT988_RS02745 PF03466 LysR substrate binding domain LT988_RS02745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT988_RS02750 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LT988_RS02750 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LT988_RS02755 PF00101 Ribulose bisphosphate carboxylase, small chain LT988_RS02760 PF07728 AAA domain (dynein-related subfamily) LT988_RS02760 PF08406 CbbQ/NirQ/NorQ C-terminal LT988_RS02770 PF00092 von Willebrand factor type A domain LT988_RS02810 PF04851 Type III restriction enzyme, res subunit LT988_RS02810 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LT988_RS02810 PF00271 Helicase conserved C-terminal domain LT988_RS02810 PF08463 EcoEI R protein C-terminal LT988_RS02815 PF08463 EcoEI R protein C-terminal LT988_RS02815 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LT988_RS02815 PF04851 Type III restriction enzyme, res subunit LT988_RS02815 PF00271 Helicase conserved C-terminal domain LT988_RS02820 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LT988_RS02820 PF00271 Helicase conserved C-terminal domain LT988_RS02820 PF08463 EcoEI R protein C-terminal LT988_RS02820 PF04851 Type III restriction enzyme, res subunit LT988_RS02825 PF00271 Helicase conserved C-terminal domain LT988_RS02825 PF04851 Type III restriction enzyme, res subunit LT988_RS02825 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LT988_RS02825 PF08463 EcoEI R protein C-terminal LT988_RS02835 PF01594 AI-2E family transporter LT988_RS02840 PF13180 PDZ domain LT988_RS02840 PF17820 PDZ domain LT988_RS02850 PF03888 MucB/RseB N-terminal domain LT988_RS02850 PF17188 MucB/RseB C-terminal domain LT988_RS02860 PF04542 Sigma-70 region 2 LT988_RS02860 PF08281 Sigma-70, region 4 LT988_RS02865 PF00890 FAD binding domain LT988_RS02865 PF02910 Fumarate reductase flavoprotein C-term LT988_RS02870 PF00391 PEP-utilising enzyme, mobile domain LT988_RS02870 PF02896 PEP-utilising enzyme, TIM barrel domain LT988_RS02870 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LT988_RS02880 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LT988_RS02880 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LT988_RS02890 PF01292 Prokaryotic cytochrome b561 LT988_RS02910 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LT988_RS02910 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LT988_RS02915 PF00374 Nickel-dependent hydrogenase LT988_RS02920 PF01292 Prokaryotic cytochrome b561 LT988_RS02925 PF01750 Hydrogenase maturation protease LT988_RS02930 PF04809 HupH hydrogenase expression protein, C-terminal conserved region LT988_RS02935 PF00301 Rubredoxin LT988_RS02940 PF02954 Bacterial regulatory protein, Fis family LT988_RS02940 PF00158 Sigma-54 interaction domain LT988_RS02940 PF00072 Response regulator receiver domain LT988_RS02955 PF00916 Sulfate permease family LT988_RS02955 PF01740 STAS domain LT988_RS02970 PF00268 Ribonucleotide reductase, small chain LT988_RS02980 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS02980 PF00563 EAL domain LT988_RS02980 PF03707 Bacterial signalling protein N terminal repeat LT988_RS02985 PF18496 Collagenase G catalytic helper subdomain LT988_RS02985 PF01752 Collagenase LT988_RS02985 PF08453 Peptidase family M9 N-terminal LT988_RS02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS02990 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS02995 PF00072 Response regulator receiver domain LT988_RS02995 PF00486 Transcriptional regulatory protein, C terminal LT988_RS03010 PF03350 Uncharacterized protein family, UPF0114 LT988_RS03020 PF04305 Protein of unknown function (DUF455) LT988_RS03025 PF13660 Domain of unknown function (DUF4147) LT988_RS03025 PF05161 MOFRL family LT988_RS03035 PF00814 Glycoprotease family LT988_RS03060 PF13401 AAA domain LT988_RS03060 PF01471 Putative peptidoglycan binding domain LT988_RS03075 PF00753 Metallo-beta-lactamase superfamily LT988_RS03075 PF03772 Competence protein LT988_RS03085 PF00005 ABC transporter LT988_RS03090 PF02687 FtsX-like permease family LT988_RS03090 PF12704 MacB-like periplasmic core domain LT988_RS03095 PF03705 CheR methyltransferase, all-alpha domain LT988_RS03095 PF01339 CheB methylesterase LT988_RS03095 PF01739 CheR methyltransferase, SAM binding domain LT988_RS03095 PF08448 PAS fold LT988_RS03100 PF00563 EAL domain LT988_RS03100 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS03100 PF03707 Bacterial signalling protein N terminal repeat LT988_RS03110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS03110 PF08448 PAS fold LT988_RS03110 PF13426 PAS domain LT988_RS03110 PF00072 Response regulator receiver domain LT988_RS03110 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS03115 PF00196 Bacterial regulatory proteins, luxR family LT988_RS03115 PF00072 Response regulator receiver domain LT988_RS03120 PF04371 Porphyromonas-type peptidyl-arginine deiminase LT988_RS03130 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LT988_RS03130 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LT988_RS03145 PF00374 Nickel-dependent hydrogenase LT988_RS03150 PF03193 RsgA GTPase LT988_RS03155 PF01139 tRNA-splicing ligase RtcB LT988_RS03180 PF03819 MazG nucleotide pyrophosphohydrolase domain LT988_RS03190 PF04551 GcpE protein LT988_RS03205 PF00472 RF-1 domain LT988_RS03210 PF02769 AIR synthase related protein, C-terminal domain LT988_RS03210 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LT988_RS03210 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LT988_RS03215 PF01225 Mur ligase family, catalytic domain LT988_RS03215 PF02875 Mur ligase family, glutamate ligase domain LT988_RS03215 PF08245 Mur ligase middle domain LT988_RS03220 PF00375 Sodium:dicarboxylate symporter family LT988_RS03250 PF02913 FAD linked oxidases, C-terminal domain LT988_RS03250 PF01565 FAD binding domain LT988_RS03255 PF04055 Radical SAM superfamily LT988_RS03255 PF16199 Radical_SAM C-terminal domain LT988_RS03260 PF01136 Peptidase family U32 LT988_RS03265 PF01136 Peptidase family U32 LT988_RS03270 PF02036 SCP-2 sterol transfer family LT988_RS03275 PF01464 Transglycosylase SLT domain LT988_RS03285 PF13401 AAA domain LT988_RS03285 PF01471 Putative peptidoglycan binding domain LT988_RS03290 PF00535 Glycosyl transferase family 2 LT988_RS03310 PF01266 FAD dependent oxidoreductase LT988_RS03325 PF08421 Putative zinc binding domain LT988_RS03325 PF08484 C-methyltransferase C-terminal domain LT988_RS03335 PF01370 NAD dependent epimerase/dehydratase family LT988_RS03340 PF00483 Nucleotidyl transferase LT988_RS03345 PF00664 ABC transporter transmembrane region LT988_RS03345 PF00005 ABC transporter LT988_RS03350 PF05547 Immune inhibitor A peptidase M6 LT988_RS03350 PF00801 PKD domain LT988_RS03360 PF01752 Collagenase LT988_RS03360 PF08453 Peptidase family M9 N-terminal LT988_RS03360 PF18496 Collagenase G catalytic helper subdomain LT988_RS03370 PF13439 Glycosyltransferase Family 4 LT988_RS03370 PF00534 Glycosyl transferases group 1 LT988_RS03375 PF13439 Glycosyltransferase Family 4 LT988_RS03375 PF00534 Glycosyl transferases group 1 LT988_RS03400 PF01797 Transposase IS200 like LT988_RS03410 PF00534 Glycosyl transferases group 1 LT988_RS03410 PF13439 Glycosyltransferase Family 4 LT988_RS03420 PF00535 Glycosyl transferase family 2 LT988_RS03450 PF00534 Glycosyl transferases group 1 LT988_RS03450 PF13439 Glycosyltransferase Family 4 LT988_RS03495 PF16363 GDP-mannose 4,6 dehydratase LT988_RS03500 PF00534 Glycosyl transferases group 1 LT988_RS03505 PF01209 ubiE/COQ5 methyltransferase family LT988_RS03525 PF01471 Putative peptidoglycan binding domain LT988_RS03525 PF13401 AAA domain LT988_RS03550 PF00664 ABC transporter transmembrane region LT988_RS03550 PF00005 ABC transporter LT988_RS03575 PF00535 Glycosyl transferase family 2 LT988_RS03600 PF04546 Sigma-70, non-essential region LT988_RS03600 PF00140 Sigma-70 factor, region 1.2 LT988_RS03600 PF04542 Sigma-70 region 2 LT988_RS03600 PF04539 Sigma-70 region 3 LT988_RS03600 PF04545 Sigma-70, region 4 LT988_RS03600 PF03979 Sigma-70 factor, region 1.1 LT988_RS03605 PF10410 DnaB-helicase binding domain of primase LT988_RS03605 PF08278 DNA primase DnaG DnaB-binding LT988_RS03605 PF13662 Toprim domain LT988_RS03605 PF08275 DNA primase catalytic core, N-terminal domain LT988_RS03605 PF01807 CHC2 zinc finger LT988_RS03610 PF09424 Yqey-like protein LT988_RS03615 PF01165 Ribosomal protein S21 LT988_RS03635 PF02386 Cation transport protein LT988_RS03650 PF13180 PDZ domain LT988_RS03655 PF01594 AI-2E family transporter LT988_RS03665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT988_RS03665 PF03466 LysR substrate binding domain LT988_RS03675 PF13686 DsrE/DsrF/DrsH-like family LT988_RS03680 PF01206 Sulfurtransferase TusA LT988_RS03685 PF00581 Rhodanese-like domain LT988_RS03690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LT988_RS03690 PF14824 Sirohaem biosynthesis protein central LT988_RS03690 PF10414 Sirohaem synthase dimerisation region LT988_RS03695 PF02660 Glycerol-3-phosphate acyltransferase LT988_RS03700 PF02152 Dihydroneopterin aldolase LT988_RS03720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT988_RS03720 PF18029 Glyoxalase-like domain LT988_RS03745 PF04073 Aminoacyl-tRNA editing domain LT988_RS03755 PF13520 Amino acid permease LT988_RS03760 PF08808 RES domain LT988_RS03765 PF09722 Protein of unknown function (DUF2384) LT988_RS03770 PF01479 S4 domain LT988_RS03770 PF00849 RNA pseudouridylate synthase LT988_RS03775 PF04079 Segregation and condensation complex subunit ScpB LT988_RS03780 PF02616 Segregation and condensation protein ScpA LT988_RS03785 PF00579 tRNA synthetases class I (W and Y) LT988_RS03790 PF02163 Peptidase family M50 LT988_RS03795 PF01300 Telomere recombination LT988_RS03800 PF02811 PHP domain LT988_RS03810 PF00158 Sigma-54 interaction domain LT988_RS03810 PF02954 Bacterial regulatory protein, Fis family LT988_RS03810 PF00072 Response regulator receiver domain LT988_RS03835 PF04023 FeoA domain LT988_RS03840 PF07670 Nucleoside recognition LT988_RS03840 PF02421 Ferrous iron transport protein B LT988_RS03840 PF17910 FeoB cytosolic helical domain LT988_RS03840 PF07664 Ferrous iron transport protein B C terminus LT988_RS03850 PF01545 Cation efflux family LT988_RS03860 PF02470 MlaD protein LT988_RS03865 PF04403 Paraquat-inducible protein A LT988_RS03870 PF04364 DNA polymerase III chi subunit, HolC LT988_RS03875 PF04358 DsrC like protein LT988_RS03880 PF03989 DNA gyrase C-terminal domain, beta-propeller LT988_RS03880 PF00521 DNA gyrase/topoisomerase IV, subunit A LT988_RS03890 PF18389 TrmO C-terminal domain LT988_RS03890 PF01980 tRNA-methyltransferase O LT988_RS03895 PF00588 SpoU rRNA Methylase family LT988_RS03895 PF08032 RNA 2'-O ribose methyltransferase substrate binding LT988_RS03900 PF00575 S1 RNA binding domain LT988_RS03900 PF00773 RNB domain LT988_RS03900 PF08206 Ribonuclease B OB domain LT988_RS03900 PF08461 Ribonuclease R winged-helix domain LT988_RS03900 PF17876 Cold shock domain LT988_RS03925 PF03079 ARD/ARD' family LT988_RS03930 PF00596 Class II Aldolase and Adducin N-terminal domain LT988_RS03940 PF13180 PDZ domain LT988_RS03940 PF17820 PDZ domain LT988_RS03955 PF01925 Sulfite exporter TauE/SafE LT988_RS03965 PF01464 Transglycosylase SLT domain LT988_RS03965 PF14718 Soluble lytic murein transglycosylase L domain LT988_RS03980 PF02001 Protein of unknown function DUF134 LT988_RS03990 PF12706 Beta-lactamase superfamily domain LT988_RS03995 PF00027 Cyclic nucleotide-binding domain LT988_RS03995 PF13545 Crp-like helix-turn-helix domain LT988_RS04005 PF00924 Mechanosensitive ion channel LT988_RS04005 PF12795 Mechanosensitive ion channel porin domain LT988_RS04005 PF12794 Mechanosensitive ion channel inner membrane domain 1 LT988_RS04025 PF00375 Sodium:dicarboxylate symporter family LT988_RS04050 PF00929 Exonuclease LT988_RS04050 PF08411 Exonuclease C-terminal LT988_RS04055 PF01245 Ribosomal protein L19 LT988_RS04060 PF01746 tRNA (Guanine-1)-methyltransferase LT988_RS04065 PF05239 PRC-barrel domain LT988_RS04065 PF01782 RimM N-terminal domain LT988_RS04070 PF00886 Ribosomal protein S16 LT988_RS04075 PF05816 Toxic anion resistance protein (TelA) LT988_RS04090 PF00311 Phosphoenolpyruvate carboxylase LT988_RS04110 PF00654 Voltage gated chloride channel LT988_RS04120 PF01476 LysM domain LT988_RS04120 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LT988_RS04135 PF00924 Mechanosensitive ion channel LT988_RS04135 PF12795 Mechanosensitive ion channel porin domain LT988_RS04135 PF12794 Mechanosensitive ion channel inner membrane domain 1 LT988_RS04165 PF00884 Sulfatase LT988_RS04170 PF01476 LysM domain LT988_RS04170 PF05737 Collagen binding domain LT988_RS04170 PF17961 Bacterial Ig domain LT988_RS04175 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LT988_RS04175 PF12833 Helix-turn-helix domain LT988_RS04190 PF03616 Sodium/glutamate symporter LT988_RS04200 PF04403 Paraquat-inducible protein A LT988_RS04205 PF02470 MlaD protein LT988_RS04215 PF10017 Histidine-specific methyltransferase, SAM-dependent LT988_RS04220 PF12867 DinB superfamily LT988_RS04220 PF03781 Sulfatase-modifying factor enzyme 1 LT988_RS04260 PF01521 Iron-sulphur cluster biosynthesis LT988_RS04270 PF02657 Fe-S metabolism associated domain LT988_RS04275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LT988_RS04280 PF00873 AcrB/AcrD/AcrF family LT988_RS04285 PF01351 Ribonuclease HII LT988_RS04290 PF02684 Lipid-A-disaccharide synthetase LT988_RS04295 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LT988_RS04295 PF00132 Bacterial transferase hexapeptide (six repeats) LT988_RS04300 PF07977 FabA-like domain LT988_RS04305 PF00132 Bacterial transferase hexapeptide (six repeats) LT988_RS04305 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LT988_RS04315 PF01103 Surface antigen LT988_RS04315 PF07244 Surface antigen variable number repeat LT988_RS04320 PF17820 PDZ domain LT988_RS04320 PF02163 Peptidase family M50 LT988_RS04320 PF13180 PDZ domain LT988_RS04325 PF13288 DXP reductoisomerase C-terminal domain LT988_RS04325 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LT988_RS04325 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LT988_RS04335 PF01255 Putative undecaprenyl diphosphate synthase LT988_RS04340 PF01765 Ribosome recycling factor LT988_RS04345 PF00696 Amino acid kinase family LT988_RS04350 PF00889 Elongation factor TS LT988_RS04355 PF00318 Ribosomal protein S2 LT988_RS04360 PF00557 Metallopeptidase family M24 LT988_RS04365 PF01842 ACT domain LT988_RS04365 PF08335 GlnD PII-uridylyltransferase LT988_RS04365 PF01966 HD domain LT988_RS04365 PF01909 Nucleotidyltransferase domain LT988_RS04380 PF00155 Aminotransferase class I and II LT988_RS04385 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LT988_RS04385 PF14602 Hexapeptide repeat of succinyl-transferase LT988_RS04385 PF00132 Bacterial transferase hexapeptide (six repeats) LT988_RS04390 PF03960 ArsC family LT988_RS04395 PF07687 Peptidase dimerisation domain LT988_RS04395 PF01546 Peptidase family M20/M25/M40 LT988_RS04400 PF01361 Tautomerase enzyme LT988_RS04410 PF01008 Initiation factor 2 subunit family LT988_RS04415 PF01979 Amidohydrolase family LT988_RS04420 PF03330 Lytic transglycolase LT988_RS04425 PF01520 N-acetylmuramoyl-L-alanine amidase LT988_RS04425 PF01471 Putative peptidoglycan binding domain LT988_RS04430 PF04293 SpoVR like protein LT988_RS04435 PF04285 Protein of unknown function (DUF444) LT988_RS04440 PF06798 PrkA serine protein kinase C-terminal domain LT988_RS04440 PF08298 PrkA AAA domain LT988_RS04445 PF00342 Phosphoglucose isomerase LT988_RS04450 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LT988_RS04450 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LT988_RS04455 PF08323 Starch synthase catalytic domain LT988_RS04455 PF00534 Glycosyl transferases group 1 LT988_RS04460 PF02261 Aspartate decarboxylase LT988_RS04465 PF02569 Pantoate-beta-alanine ligase LT988_RS04470 PF02548 Ketopantoate hydroxymethyltransferase LT988_RS04475 PF12627 Probable RNA and SrmB- binding site of polymerase A LT988_RS04475 PF01743 Poly A polymerase head domain LT988_RS04475 PF12626 Polymerase A arginine-rich C-terminus LT988_RS04485 PF02978 Signal peptide binding domain LT988_RS04485 PF00448 SRP54-type protein, GTPase domain LT988_RS04485 PF02881 SRP54-type protein, helical bundle domain LT988_RS04490 PF01578 Cytochrome C assembly protein LT988_RS04515 PF00462 Glutaredoxin LT988_RS04515 PF08534 Redoxin LT988_RS04520 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS04520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT988_RS04525 PF01207 Dihydrouridine synthase (Dus) LT988_RS04545 PF04055 Radical SAM superfamily LT988_RS04545 PF18693 TRAM domain LT988_RS04545 PF00919 Uncharacterized protein family UPF0004 LT988_RS04550 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS04550 PF00589 Phage integrase family LT988_RS04555 PF02384 N-6 DNA Methylase LT988_RS04570 PF00580 UvrD/REP helicase N-terminal domain LT988_RS04570 PF13361 UvrD-like helicase C-terminal domain LT988_RS04585 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LT988_RS04600 PF01367 5'-3' exonuclease, C-terminal SAM fold LT988_RS04600 PF00476 DNA polymerase family A LT988_RS04600 PF01612 3'-5' exonuclease LT988_RS04600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LT988_RS04610 PF00034 Cytochrome c LT988_RS04610 PF03150 Di-haem cytochrome c peroxidase LT988_RS04615 PF03937 Flavinator of succinate dehydrogenase LT988_RS04620 PF13085 2Fe-2S iron-sulfur cluster binding domain LT988_RS04625 PF02910 Fumarate reductase flavoprotein C-term LT988_RS04625 PF00890 FAD binding domain LT988_RS04630 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LT988_RS04645 PF03279 Bacterial lipid A biosynthesis acyltransferase LT988_RS04655 PF01103 Surface antigen LT988_RS04655 PF07244 Surface antigen variable number repeat LT988_RS04655 PF17243 POTRA domain TamA domain 1 LT988_RS04670 PF02685 Glucokinase LT988_RS04690 PF00005 ABC transporter LT988_RS04695 PF02405 Permease MlaE LT988_RS04715 PF08753 NikR C terminal nickel binding domain LT988_RS04715 PF01402 Ribbon-helix-helix protein, copG family LT988_RS04730 PF14403 Circularly permuted ATP-grasp type 2 LT988_RS04735 PF02080 TrkA-C domain LT988_RS04735 PF02254 TrkA-N domain LT988_RS04740 PF02386 Cation transport protein LT988_RS04745 PF02867 Ribonucleotide reductase, barrel domain LT988_RS04745 PF00317 Ribonucleotide reductase, all-alpha domain LT988_RS04745 PF03477 ATP cone domain LT988_RS04755 PF06411 HdeA/HdeB family LT988_RS04765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LT988_RS04765 PF09317 Domain of unknown function (DUF1974) LT988_RS04765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LT988_RS04770 PF02803 Thiolase, C-terminal domain LT988_RS04770 PF00108 Thiolase, N-terminal domain LT988_RS04775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LT988_RS04775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LT988_RS04775 PF00378 Enoyl-CoA hydratase/isomerase LT988_RS04780 PF00501 AMP-binding enzyme LT988_RS04785 PF16363 GDP-mannose 4,6 dehydratase LT988_RS04790 PF00535 Glycosyl transferase family 2 LT988_RS04800 PF15887 Putative zinc-binding metallo-peptidase LT988_RS04800 PF10005 zinc-ribbon domain LT988_RS04810 PF01926 50S ribosome-binding GTPase LT988_RS04810 PF06071 Protein of unknown function (DUF933) LT988_RS04815 PF00483 Nucleotidyl transferase LT988_RS04815 PF01050 Mannose-6-phosphate isomerase LT988_RS04820 PF00459 Inositol monophosphatase family LT988_RS04835 PF00589 Phage integrase family LT988_RS04855 PF02384 N-6 DNA Methylase LT988_RS04915 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LT988_RS04930 PF00111 2Fe-2S iron-sulfur cluster binding domain LT988_RS04930 PF01799 [2Fe-2S] binding domain LT988_RS04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT988_RS04945 PF03459 TOBE domain LT988_RS04955 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS04960 PF00005 ABC transporter LT988_RS04960 PF03459 TOBE domain LT988_RS04975 PF00563 EAL domain LT988_RS04975 PF08448 PAS fold LT988_RS04975 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS04980 PF01625 Peptide methionine sulfoxide reductase LT988_RS04990 PF03009 Glycerophosphoryl diester phosphodiesterase family LT988_RS05020 PF04324 BFD-like [2Fe-2S] binding domain LT988_RS05020 PF01106 NifU-like domain LT988_RS05020 PF01592 NifU-like N terminal domain LT988_RS05025 PF00266 Aminotransferase class-V LT988_RS05030 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LT988_RS05035 PF00266 Aminotransferase class-V LT988_RS05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS05040 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS05040 PF00497 Bacterial extracellular solute-binding proteins, family 3 LT988_RS05045 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LT988_RS05045 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LT988_RS05050 PF00374 Nickel-dependent hydrogenase LT988_RS05055 PF13614 AAA domain LT988_RS05075 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS05080 PF00654 Voltage gated chloride channel LT988_RS05095 PF18395 Cas3 C-terminal domain LT988_RS05095 PF18019 HD domain LT988_RS05100 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) LT988_RS05110 PF09344 CT1975-like protein LT988_RS05120 PF08798 CRISPR associated protein LT988_RS05130 PF01867 CRISPR associated protein Cas1 LT988_RS05135 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) LT988_RS05155 PF01842 ACT domain LT988_RS05160 PF00578 AhpC/TSA family LT988_RS05165 PF13638 PIN domain LT988_RS05165 PF02562 PhoH-like protein LT988_RS05180 PF13173 AAA domain LT988_RS05180 PF13635 Domain of unknown function (DUF4143) LT988_RS05220 PF00916 Sulfate permease family LT988_RS05220 PF01740 STAS domain LT988_RS05250 PF07678 A-macroglobulin TED domain LT988_RS05250 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LT988_RS05250 PF17962 Bacterial macroglobulin domain 6 LT988_RS05250 PF00207 Alpha-2-macroglobulin family LT988_RS05250 PF07703 Alpha-2-macroglobulin bait region domain LT988_RS05250 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LT988_RS05250 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LT988_RS05250 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LT988_RS05250 PF01835 MG2 domain LT988_RS05265 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LT988_RS05265 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LT988_RS05280 PF01593 Flavin containing amine oxidoreductase LT988_RS05285 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS05285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT988_RS05310 PF00873 AcrB/AcrD/AcrF family LT988_RS05315 PF08681 Protein of unknown function (DUF1778) LT988_RS05350 PF13538 UvrD-like helicase C-terminal domain LT988_RS05355 PF13361 UvrD-like helicase C-terminal domain LT988_RS05355 PF12705 PD-(D/E)XK nuclease superfamily LT988_RS05355 PF00580 UvrD/REP helicase N-terminal domain LT988_RS05360 PF17946 RecC C-terminal domain LT988_RS05370 PF00005 ABC transporter LT988_RS05370 PF00027 Cyclic nucleotide-binding domain LT988_RS05380 PF01475 Ferric uptake regulator family LT988_RS05385 PF00950 ABC 3 transport family LT988_RS05390 PF00005 ABC transporter LT988_RS05395 PF01297 Zinc-uptake complex component A periplasmic LT988_RS05395 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LT988_RS05405 PF01169 Uncharacterized protein family UPF0016 LT988_RS05430 PF06779 Uncharacterised MFS-type transporter YbfB LT988_RS05440 PF00364 Biotin-requiring enzyme LT988_RS05440 PF02436 Conserved carboxylase domain LT988_RS05440 PF00682 HMGL-like LT988_RS05445 PF02785 Biotin carboxylase C-terminal domain LT988_RS05445 PF00289 Biotin carboxylase, N-terminal domain LT988_RS05445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LT988_RS05470 PF07670 Nucleoside recognition LT988_RS05485 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system LT988_RS05490 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LT988_RS05495 PF01381 Helix-turn-helix LT988_RS05500 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB LT988_RS05520 PF01850 PIN domain LT988_RS05525 PF09957 Bacterial antitoxin of type II TA system, VapB LT988_RS05540 PF11455 Protein of unknown function (DUF3018) LT988_RS05595 PF01614 Bacterial transcriptional regulator LT988_RS05595 PF09339 IclR helix-turn-helix domain LT988_RS05600 PF07726 ATPase family associated with various cellular activities (AAA) LT988_RS05600 PF17863 AAA lid domain LT988_RS05605 PF01882 Protein of unknown function DUF58 LT988_RS05615 PF00092 von Willebrand factor type A domain LT988_RS05620 PF07584 Aerotolerance regulator N-terminal LT988_RS05620 PF00092 von Willebrand factor type A domain LT988_RS05635 PF00471 Ribosomal protein L33 LT988_RS05640 PF00830 Ribosomal L28 family LT988_RS05650 PF00361 Proton-conducting membrane transporter LT988_RS05665 PF03334 Na+/H+ antiporter subunit LT988_RS05680 PF00873 AcrB/AcrD/AcrF family LT988_RS05685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LT988_RS05695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS05695 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS05695 PF08448 PAS fold LT988_RS05695 PF13426 PAS domain LT988_RS05695 PF00072 Response regulator receiver domain LT988_RS05700 PF00196 Bacterial regulatory proteins, luxR family LT988_RS05700 PF00072 Response regulator receiver domain LT988_RS05705 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LT988_RS05710 PF01850 PIN domain LT988_RS05720 PF13520 Amino acid permease LT988_RS05740 PF01594 AI-2E family transporter LT988_RS05760 PF03253 Urea transporter LT988_RS05795 PF02687 FtsX-like permease family LT988_RS05795 PF12704 MacB-like periplasmic core domain LT988_RS05795 PF00005 ABC transporter LT988_RS05810 PF02874 ATP synthase alpha/beta family, beta-barrel domain LT988_RS05810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT988_RS05815 PF01813 ATP synthase subunit D LT988_RS05840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT988_RS05840 PF02874 ATP synthase alpha/beta family, beta-barrel domain LT988_RS05840 PF16886 ATPsynthase alpha/beta subunit N-term extension LT988_RS05860 PF03631 Virulence factor BrkB LT988_RS05865 PF00005 ABC transporter LT988_RS05865 PF02687 FtsX-like permease family LT988_RS05865 PF12704 MacB-like periplasmic core domain LT988_RS05870 PF00484 Carbonic anhydrase LT988_RS05880 PF00872 Transposase, Mutator family LT988_RS05905 PF00462 Glutaredoxin LT988_RS05920 PF00989 PAS fold LT988_RS05920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS05920 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS05925 PF00196 Bacterial regulatory proteins, luxR family LT988_RS05925 PF00072 Response regulator receiver domain LT988_RS05940 PF00884 Sulfatase LT988_RS05945 PF01476 LysM domain LT988_RS05945 PF00877 NlpC/P60 family LT988_RS05975 PF00884 Sulfatase LT988_RS05985 PF01476 LysM domain LT988_RS05985 PF01464 Transglycosylase SLT domain LT988_RS05990 PF01914 MarC family integral membrane protein LT988_RS06000 PF03600 Citrate transporter LT988_RS06010 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LT988_RS06010 PF00034 Cytochrome c LT988_RS06010 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LT988_RS06040 PF02321 Outer membrane efflux protein LT988_RS06045 PF00529 HlyD membrane-fusion protein of T1SS LT988_RS06045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LT988_RS06070 PF00999 Sodium/hydrogen exchanger family LT988_RS06080 PF03600 Citrate transporter LT988_RS06085 PF00690 Cation transporter/ATPase, N-terminus LT988_RS06085 PF00689 Cation transporting ATPase, C-terminus LT988_RS06090 PF03976 Polyphosphate kinase 2 (PPK2) LT988_RS06105 PF12833 Helix-turn-helix domain LT988_RS06115 PF00924 Mechanosensitive ion channel LT988_RS06125 PF01544 CorA-like Mg2+ transporter protein LT988_RS06145 PF05724 Thiopurine S-methyltransferase (TPMT) LT988_RS06150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS06150 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS06150 PF00989 PAS fold LT988_RS06155 PF02954 Bacterial regulatory protein, Fis family LT988_RS06155 PF00072 Response regulator receiver domain LT988_RS06155 PF00158 Sigma-54 interaction domain LT988_RS06165 PF01434 Peptidase family M41 LT988_RS06165 PF00004 ATPase family associated with various cellular activities (AAA) LT988_RS06165 PF17862 AAA+ lid domain LT988_RS06165 PF06480 FtsH Extracellular LT988_RS06180 PF02661 Fic/DOC family LT988_RS06180 PF13784 Fic/DOC family N-terminal LT988_RS06185 PF00529 HlyD membrane-fusion protein of T1SS LT988_RS06185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LT988_RS06190 PF07690 Major Facilitator Superfamily LT988_RS06200 PF00999 Sodium/hydrogen exchanger family LT988_RS06205 PF02705 K+ potassium transporter LT988_RS06215 PF05724 Thiopurine S-methyltransferase (TPMT) LT988_RS06225 PF16123 Hydroxyacylglutathione hydrolase C-terminus LT988_RS06225 PF00753 Metallo-beta-lactamase superfamily LT988_RS06250 PF13091 PLD-like domain LT988_RS06270 PF01515 Phosphate acetyl/butaryl transferase LT988_RS06275 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS06275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT988_RS06285 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS06285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT988_RS06290 PF00582 Universal stress protein family LT988_RS06305 PF13533 Biotin-lipoyl like LT988_RS06320 PF00205 Thiamine pyrophosphate enzyme, central domain LT988_RS06320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LT988_RS06320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LT988_RS06330 PF00563 EAL domain LT988_RS06330 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS06330 PF03707 Bacterial signalling protein N terminal repeat LT988_RS06335 PF00145 C-5 cytosine-specific DNA methylase LT988_RS06340 PF03852 DNA mismatch endonuclease Vsr LT988_RS06345 PF00563 EAL domain LT988_RS06345 PF03707 Bacterial signalling protein N terminal repeat LT988_RS06345 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS06350 PF01274 Malate synthase LT988_RS06365 PF00072 Response regulator receiver domain LT988_RS06365 PF00486 Transcriptional regulatory protein, C terminal LT988_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS06375 PF16363 GDP-mannose 4,6 dehydratase LT988_RS06390 PF13091 PLD-like domain LT988_RS06390 PF13396 Phospholipase_D-nuclease N-terminal LT988_RS06400 PF03600 Citrate transporter LT988_RS06400 PF02080 TrkA-C domain LT988_RS06405 PF17862 AAA+ lid domain LT988_RS06405 PF01434 Peptidase family M41 LT988_RS06405 PF00004 ATPase family associated with various cellular activities (AAA) LT988_RS06415 PF03707 Bacterial signalling protein N terminal repeat LT988_RS06415 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS06415 PF00563 EAL domain LT988_RS06415 PF03707 Bacterial signalling protein N terminal repeat LT988_RS06415 PF00563 EAL domain LT988_RS06415 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS06420 PF00873 AcrB/AcrD/AcrF family LT988_RS06460 PF11898 Domain of unknown function (DUF3418) LT988_RS06460 PF00270 DEAD/DEAH box helicase LT988_RS06460 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LT988_RS06460 PF00271 Helicase conserved C-terminal domain LT988_RS06460 PF04408 Helicase associated domain (HA2) LT988_RS06485 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS06485 PF00072 Response regulator receiver domain LT988_RS06485 PF00563 EAL domain LT988_RS06490 PF01343 Peptidase family S49 LT988_RS06495 PF13419 Haloacid dehalogenase-like hydrolase LT988_RS06500 PF01479 S4 domain LT988_RS06500 PF00849 RNA pseudouridylate synthase LT988_RS06505 PF12111 Polyribonucleotide phosphorylase C terminal LT988_RS06505 PF10150 Ribonuclease E/G family LT988_RS06505 PF00575 S1 RNA binding domain LT988_RS06525 PF01451 Low molecular weight phosphotyrosine protein phosphatase LT988_RS06535 PF00862 Sucrose synthase LT988_RS06535 PF00534 Glycosyl transferases group 1 LT988_RS06540 PF05116 Sucrose-6F-phosphate phosphohydrolase LT988_RS06540 PF05166 YcgL domain LT988_RS06545 PF00294 pfkB family carbohydrate kinase LT988_RS06550 PF00128 Alpha amylase, catalytic domain LT988_RS06555 PF01343 Peptidase family S49 LT988_RS06555 PF08496 Peptidase family S49 N-terminal LT988_RS06570 PF00303 Thymidylate synthase LT988_RS06575 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LT988_RS06575 PF01676 Metalloenzyme superfamily LT988_RS06580 PF00483 Nucleotidyl transferase LT988_RS06585 PF00106 short chain dehydrogenase LT988_RS06605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LT988_RS06605 PF07685 CobB/CobQ-like glutamine amidotransferase domain LT988_RS06615 PF13247 4Fe-4S dicluster domain LT988_RS06625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LT988_RS06625 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS06640 PF04358 DsrC like protein LT988_RS06645 PF04077 DsrH like protein LT988_RS06650 PF02635 DsrE/DsrF-like family LT988_RS06655 PF02635 DsrE/DsrF-like family LT988_RS06660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LT988_RS06660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LT988_RS06665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LT988_RS06665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LT988_RS06690 PF04358 DsrC like protein LT988_RS06700 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LT988_RS06705 PF00484 Carbonic anhydrase LT988_RS06715 PF02954 Bacterial regulatory protein, Fis family LT988_RS06715 PF00072 Response regulator receiver domain LT988_RS06715 PF00158 Sigma-54 interaction domain LT988_RS06720 PF04002 RadC-like JAB domain LT988_RS06740 PF03209 PUCC protein LT988_RS06745 PF00556 Antenna complex alpha/beta subunit LT988_RS06750 PF00556 Antenna complex alpha/beta subunit LT988_RS06755 PF00556 Antenna complex alpha/beta subunit LT988_RS06760 PF00556 Antenna complex alpha/beta subunit LT988_RS06765 PF00556 Antenna complex alpha/beta subunit LT988_RS06770 PF00556 Antenna complex alpha/beta subunit LT988_RS06775 PF00556 Antenna complex alpha/beta subunit LT988_RS06780 PF00556 Antenna complex alpha/beta subunit LT988_RS06790 PF00210 Ferritin-like domain LT988_RS06795 PF00210 Ferritin-like domain LT988_RS06805 PF03150 Di-haem cytochrome c peroxidase LT988_RS06805 PF00034 Cytochrome c LT988_RS06815 PF03330 Lytic transglycolase LT988_RS06815 PF05036 Sporulation related domain LT988_RS06825 PF00005 ABC transporter LT988_RS06835 PF01323 DSBA-like thioredoxin domain LT988_RS06845 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LT988_RS06845 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LT988_RS06860 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LT988_RS06860 PF00072 Response regulator receiver domain LT988_RS06860 PF01627 Hpt domain LT988_RS06860 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS06860 PF00672 HAMP domain LT988_RS06890 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LT988_RS06895 PF00072 Response regulator receiver domain LT988_RS06905 PF09364 XFP N-terminal domain LT988_RS06905 PF09363 XFP C-terminal domain LT988_RS06905 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LT988_RS06910 PF00343 Carbohydrate phosphorylase LT988_RS06925 PF01427 D-ala-D-ala dipeptidase LT988_RS06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS06935 PF00989 PAS fold LT988_RS06935 PF18698 Histidine kinase sensor domain LT988_RS06935 PF00672 HAMP domain LT988_RS06935 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS06940 PF00486 Transcriptional regulatory protein, C terminal LT988_RS06940 PF00072 Response regulator receiver domain LT988_RS06950 PF02654 Cobalamin-5-phosphate synthase LT988_RS06960 PF02277 Phosphoribosyltransferase LT988_RS06965 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LT988_RS06970 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LT988_RS06970 PF12557 Cob(I)alamin adenosyltransferase N terminal LT988_RS06980 PF07715 TonB-dependent Receptor Plug Domain LT988_RS06980 PF00593 TonB dependent receptor LT988_RS06985 PF01699 Sodium/calcium exchanger protein LT988_RS06990 PF01699 Sodium/calcium exchanger protein LT988_RS06995 PF01914 MarC family integral membrane protein LT988_RS07015 PF03976 Polyphosphate kinase 2 (PPK2) LT988_RS07035 PF03061 Thioesterase superfamily LT988_RS07045 PF03600 Citrate transporter LT988_RS07055 PF01300 Telomere recombination LT988_RS07070 PF01740 STAS domain LT988_RS07070 PF00916 Sulfate permease family LT988_RS07075 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LT988_RS07075 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LT988_RS07080 PF00101 Ribulose bisphosphate carboxylase, small chain LT988_RS07105 PF00936 BMC domain LT988_RS07110 PF00936 BMC domain LT988_RS07115 PF00210 Ferritin-like domain LT988_RS07130 PF03466 LysR substrate binding domain LT988_RS07130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT988_RS07135 PF00300 Histidine phosphatase superfamily (branch 1) LT988_RS07140 PF13409 Glutathione S-transferase, N-terminal domain LT988_RS07175 PF02469 Fasciclin domain LT988_RS07195 PF13007 Transposase C of IS166 homeodomain LT988_RS07195 PF13817 IS66 C-terminal element LT988_RS07195 PF03050 Transposase IS66 family LT988_RS07195 PF13005 zinc-finger binding domain of transposase IS66 LT988_RS07215 PF13007 Transposase C of IS166 homeodomain LT988_RS07215 PF13817 IS66 C-terminal element LT988_RS07215 PF13005 zinc-finger binding domain of transposase IS66 LT988_RS07215 PF03050 Transposase IS66 family LT988_RS07265 PF00145 C-5 cytosine-specific DNA methylase LT988_RS07300 PF00873 AcrB/AcrD/AcrF family LT988_RS07325 PF00924 Mechanosensitive ion channel LT988_RS07375 PF12826 Helix-hairpin-helix motif LT988_RS07375 PF03120 NAD-dependent DNA ligase OB-fold domain LT988_RS07375 PF01653 NAD-dependent DNA ligase adenylation domain LT988_RS07375 PF00533 BRCA1 C Terminus (BRCT) domain LT988_RS07375 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LT988_RS07385 PF03050 Transposase IS66 family LT988_RS07385 PF13817 IS66 C-terminal element LT988_RS07385 PF13007 Transposase C of IS166 homeodomain LT988_RS07385 PF13005 zinc-finger binding domain of transposase IS66 LT988_RS07410 PF05685 Putative restriction endonuclease LT988_RS07420 PF00270 DEAD/DEAH box helicase LT988_RS07420 PF09369 Domain of unknown function (DUF1998) LT988_RS07420 PF00271 Helicase conserved C-terminal domain LT988_RS07425 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LT988_RS07430 PF02222 ATP-grasp domain LT988_RS07430 PF01370 NAD dependent epimerase/dehydratase family LT988_RS07455 PF02586 SOS response associated peptidase (SRAP) LT988_RS07465 PF00171 Aldehyde dehydrogenase family LT988_RS07470 PF01804 Penicillin amidase LT988_RS07485 PF06685 Protein of unknown function (DUF1186) LT988_RS07490 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS07490 PF09456 RcsC Alpha-Beta-Loop (ABL) LT988_RS07490 PF00072 Response regulator receiver domain LT988_RS07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS07495 PF00881 Nitroreductase family LT988_RS07505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LT988_RS07515 PF01596 O-methyltransferase LT988_RS07565 PF00114 Pilin (bacterial filament) LT988_RS07565 PF07963 Prokaryotic N-terminal methylation motif LT988_RS07570 PF07963 Prokaryotic N-terminal methylation motif LT988_RS07570 PF00114 Pilin (bacterial filament) LT988_RS07580 PF05567 Neisseria PilC beta-propeller domain LT988_RS07600 PF00114 Pilin (bacterial filament) LT988_RS07600 PF07963 Prokaryotic N-terminal methylation motif LT988_RS07605 PF07963 Prokaryotic N-terminal methylation motif LT988_RS07605 PF00114 Pilin (bacterial filament) LT988_RS07635 PF00107 Zinc-binding dehydrogenase LT988_RS07635 PF08240 Alcohol dehydrogenase GroES-like domain LT988_RS07645 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS07645 PF00589 Phage integrase family LT988_RS07680 PF00486 Transcriptional regulatory protein, C terminal LT988_RS07680 PF00072 Response regulator receiver domain LT988_RS07690 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LT988_RS07695 PF13237 4Fe-4S dicluster domain LT988_RS07695 PF12801 4Fe-4S binding domain LT988_RS07700 PF12838 4Fe-4S dicluster domain LT988_RS07700 PF12800 4Fe-4S binding domain LT988_RS07705 PF00384 Molybdopterin oxidoreductase LT988_RS07705 PF01568 Molydopterin dinucleotide binding domain LT988_RS07705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LT988_RS07705 PF10518 TAT (twin-arginine translocation) pathway signal sequence LT988_RS07730 PF00005 ABC transporter LT988_RS07740 PF00355 Rieske [2Fe-2S] domain LT988_RS07755 PF01641 SelR domain LT988_RS07760 PF00892 EamA-like transporter family LT988_RS07775 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LT988_RS07775 PF10996 Beta-Casp domain LT988_RS07775 PF00753 Metallo-beta-lactamase superfamily LT988_RS07790 PF00924 Mechanosensitive ion channel LT988_RS07790 PF05552 Conserved TM helix LT988_RS07845 PF00282 Pyridoxal-dependent decarboxylase conserved domain LT988_RS07855 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH LT988_RS07920 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS07920 PF00589 Phage integrase family LT988_RS07925 PF00589 Phage integrase family LT988_RS07930 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS07930 PF00589 Phage integrase family LT988_RS07935 PF13007 Transposase C of IS166 homeodomain LT988_RS07935 PF13817 IS66 C-terminal element LT988_RS07935 PF03050 Transposase IS66 family LT988_RS07935 PF13005 zinc-finger binding domain of transposase IS66 LT988_RS07965 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) LT988_RS07970 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family LT988_RS07975 PF00148 Nitrogenase component 1 type Oxidoreductase LT988_RS07980 PF11844 Domain of unknown function (DUF3364) LT988_RS07980 PF00148 Nitrogenase component 1 type Oxidoreductase LT988_RS07985 PF06988 NifT/FixU protein LT988_RS07990 PF00037 4Fe-4S binding domain LT988_RS07995 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal LT988_RS07995 PF02579 Dinitrogenase iron-molybdenum cofactor LT988_RS08010 PF03030 Inorganic H+ pyrophosphatase LT988_RS08025 PF02219 Methylenetetrahydrofolate reductase LT988_RS08030 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LT988_RS08030 PF05221 S-adenosyl-L-homocysteine hydrolase LT988_RS08035 PF00438 S-adenosylmethionine synthetase, N-terminal domain LT988_RS08035 PF02772 S-adenosylmethionine synthetase, central domain LT988_RS08035 PF02773 S-adenosylmethionine synthetase, C-terminal domain LT988_RS08045 PF02780 Transketolase, C-terminal domain LT988_RS08045 PF02779 Transketolase, pyrimidine binding domain LT988_RS08045 PF00456 Transketolase, thiamine diphosphate binding domain LT988_RS08050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LT988_RS08050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LT988_RS08060 PF00162 Phosphoglycerate kinase LT988_RS08065 PF00224 Pyruvate kinase, barrel domain LT988_RS08065 PF02887 Pyruvate kinase, alpha/beta domain LT988_RS08070 PF01116 Fructose-bisphosphate aldolase class-II LT988_RS08085 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LT988_RS08085 PF01243 Pyridoxamine 5'-phosphate oxidase LT988_RS08090 PF00463 Isocitrate lyase family LT988_RS08095 PF00563 EAL domain LT988_RS08095 PF03707 Bacterial signalling protein N terminal repeat LT988_RS08095 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS08120 PF03737 Aldolase/RraA LT988_RS08125 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LT988_RS08145 PF09972 Predicted membrane protein (DUF2207) LT988_RS08150 PF04011 LemA family LT988_RS08155 PF01464 Transglycosylase SLT domain LT988_RS08165 PF02666 Phosphatidylserine decarboxylase LT988_RS08190 PF18030 RimK PreATP-grasp domain LT988_RS08190 PF08443 RimK-like ATP-grasp domain LT988_RS08200 PF14403 Circularly permuted ATP-grasp type 2 LT988_RS08215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS08215 PF00672 HAMP domain LT988_RS08215 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LT988_RS08215 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS08215 PF00072 Response regulator receiver domain LT988_RS08215 PF01627 Hpt domain LT988_RS08220 PF03631 Virulence factor BrkB LT988_RS08225 PF00578 AhpC/TSA family LT988_RS08230 PF00271 Helicase conserved C-terminal domain LT988_RS08230 PF00270 DEAD/DEAH box helicase LT988_RS08230 PF03880 DbpA RNA binding domain LT988_RS08245 PF07733 Bacterial DNA polymerase III alpha NTPase domain LT988_RS08245 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LT988_RS08245 PF14579 Helix-hairpin-helix motif LT988_RS08245 PF02811 PHP domain LT988_RS08245 PF01336 OB-fold nucleic acid binding domain LT988_RS08255 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS08255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT988_RS08290 PF03976 Polyphosphate kinase 2 (PPK2) LT988_RS08325 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LT988_RS08325 PF12833 Helix-turn-helix domain LT988_RS08345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LT988_RS08345 PF00529 HlyD membrane-fusion protein of T1SS LT988_RS08355 PF13533 Biotin-lipoyl like LT988_RS08360 PF00873 AcrB/AcrD/AcrF family LT988_RS08375 PF07556 Protein of unknown function (DUF1538) LT988_RS08390 PF01740 STAS domain LT988_RS08390 PF00916 Sulfate permease family LT988_RS08410 PF04262 Glutamate-cysteine ligase LT988_RS08415 PF03572 Peptidase family S41 LT988_RS08415 PF17804 Tail specific protease N-terminal domain LT988_RS08415 PF11818 C-terminal domain of tail specific protease (DUF3340) LT988_RS08415 PF00595 PDZ domain LT988_RS08420 PF01327 Polypeptide deformylase LT988_RS08430 PF02578 Multi-copper polyphenol oxidoreductase laccase LT988_RS08435 PF00849 RNA pseudouridylate synthase LT988_RS08435 PF01479 S4 domain LT988_RS08440 PF13525 Outer membrane lipoprotein LT988_RS08445 PF00543 Nitrogen regulatory protein P-II LT988_RS08450 PF02540 NAD synthase LT988_RS08450 PF00795 Carbon-nitrogen hydrolase LT988_RS08455 PF02629 CoA binding domain LT988_RS08455 PF00549 CoA-ligase LT988_RS08460 PF08442 ATP-grasp domain LT988_RS08460 PF00549 CoA-ligase LT988_RS08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS08465 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS08470 PF00158 Sigma-54 interaction domain LT988_RS08470 PF02954 Bacterial regulatory protein, Fis family LT988_RS08470 PF00072 Response regulator receiver domain LT988_RS08475 PF00696 Amino acid kinase family LT988_RS08475 PF00583 Acetyltransferase (GNAT) family LT988_RS08480 PF00924 Mechanosensitive ion channel LT988_RS08480 PF12795 Mechanosensitive ion channel porin domain LT988_RS08480 PF12794 Mechanosensitive ion channel inner membrane domain 1 LT988_RS08495 PF01258 Prokaryotic dksA/traR C4-type zinc finger LT988_RS08505 PF07152 YaeQ protein LT988_RS08510 PF00483 Nucleotidyl transferase LT988_RS08515 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LT988_RS08520 PF18073 Rubredoxin metal binding domain LT988_RS08545 PF02690 Na+/Pi-cotransporter LT988_RS08550 PF00501 AMP-binding enzyme LT988_RS08590 PF00664 ABC transporter transmembrane region LT988_RS08590 PF00005 ABC transporter LT988_RS08595 PF00571 CBS domain LT988_RS08600 PF00271 Helicase conserved C-terminal domain LT988_RS08600 PF00176 SNF2 family N-terminal domain LT988_RS08600 PF12419 SNF2 Helicase protein LT988_RS08605 PF04434 SWIM zinc finger LT988_RS08635 PF01336 OB-fold nucleic acid binding domain LT988_RS08635 PF00152 tRNA synthetases class II (D, K and N) LT988_RS08635 PF02938 GAD domain LT988_RS08655 PF00106 short chain dehydrogenase LT988_RS08660 PF03449 Transcription elongation factor, N-terminal LT988_RS08660 PF01272 Transcription elongation factor, GreA/GreB, C-term LT988_RS08665 PF02142 MGS-like domain LT988_RS08665 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LT988_RS08665 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LT988_RS08670 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LT988_RS08670 PF00117 Glutamine amidotransferase class-I LT988_RS08675 PF00085 Thioredoxin LT988_RS08680 PF00085 Thioredoxin LT988_RS08685 PF11734 TilS substrate C-terminal domain LT988_RS08685 PF01171 PP-loop family LT988_RS08685 PF09179 TilS substrate binding domain LT988_RS08690 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LT988_RS08700 PF00117 Glutamine amidotransferase class-I LT988_RS08705 PF00005 ABC transporter LT988_RS08705 PF02687 FtsX-like permease family LT988_RS08705 PF12704 MacB-like periplasmic core domain LT988_RS08720 PF00563 EAL domain LT988_RS08720 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS08720 PF03707 Bacterial signalling protein N terminal repeat LT988_RS08730 PF13742 OB-fold nucleic acid binding domain LT988_RS08730 PF02601 Exonuclease VII, large subunit LT988_RS08735 PF00478 IMP dehydrogenase / GMP reductase domain LT988_RS08735 PF00571 CBS domain LT988_RS08740 PF00117 Glutamine amidotransferase class-I LT988_RS08740 PF02540 NAD synthase LT988_RS08740 PF00958 GMP synthase C terminal domain LT988_RS08745 PF14437 MafB19-like deaminase LT988_RS08795 PF04055 Radical SAM superfamily LT988_RS08795 PF00919 Uncharacterized protein family UPF0004 LT988_RS08805 PF01177 Asp/Glu/Hydantoin racemase LT988_RS08810 PF03372 Endonuclease/Exonuclease/phosphatase family LT988_RS08815 PF00483 Nucleotidyl transferase LT988_RS08830 PF04055 Radical SAM superfamily LT988_RS08835 PF00293 NUDIX domain LT988_RS08840 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LT988_RS08850 PF00556 Antenna complex alpha/beta subunit LT988_RS08855 PF00556 Antenna complex alpha/beta subunit LT988_RS08860 PF00556 Antenna complex alpha/beta subunit LT988_RS08865 PF02276 Photosynthetic reaction centre cytochrome C subunit LT988_RS08870 PF00124 Photosynthetic reaction centre protein LT988_RS08875 PF00124 Photosynthetic reaction centre protein LT988_RS08880 PF00556 Antenna complex alpha/beta subunit LT988_RS08885 PF00556 Antenna complex alpha/beta subunit LT988_RS08895 PF00148 Nitrogenase component 1 type Oxidoreductase LT988_RS08895 PF08369 Proto-chlorophyllide reductase 57 kD subunit LT988_RS08900 PF00148 Nitrogenase component 1 type Oxidoreductase LT988_RS08905 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family LT988_RS08910 PF08240 Alcohol dehydrogenase GroES-like domain LT988_RS08915 PF00891 O-methyltransferase domain LT988_RS08915 PF16864 Dimerisation domain LT988_RS08920 PF00348 Polyprenyl synthetase LT988_RS08925 PF01593 Flavin containing amine oxidoreductase LT988_RS08935 PF13193 AMP-binding enzyme C-terminal domain LT988_RS08935 PF00501 AMP-binding enzyme LT988_RS08940 PF02830 V4R domain LT988_RS08945 PF06969 HemN C-terminal domain LT988_RS08945 PF04055 Radical SAM superfamily LT988_RS08950 PF02310 B12 binding domain LT988_RS08950 PF04055 Radical SAM superfamily LT988_RS08955 PF12291 Protein of unknown function (DUF3623) LT988_RS08965 PF03703 Bacterial PH domain LT988_RS08970 PF05239 PRC-barrel domain LT988_RS08970 PF03967 Photosynthetic reaction centre, H-chain N-terminal region LT988_RS08975 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus LT988_RS08975 PF05175 Methyltransferase small domain LT988_RS08980 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family LT988_RS08985 PF02514 CobN/Magnesium Chelatase LT988_RS08985 PF11965 Domain of unknown function (DUF3479) LT988_RS08990 PF00148 Nitrogenase component 1 type Oxidoreductase LT988_RS08990 PF08369 Proto-chlorophyllide reductase 57 kD subunit LT988_RS08995 PF00148 Nitrogenase component 1 type Oxidoreductase LT988_RS09000 PF07284 2-vinyl bacteriochlorophyllide hydratase (BCHF) LT988_RS09005 PF02954 Bacterial regulatory protein, Fis family LT988_RS09005 PF13188 PAS domain LT988_RS09005 PF13426 PAS domain LT988_RS09010 PF01040 UbiA prenyltransferase family LT988_RS09025 PF01590 GAF domain LT988_RS09025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS09025 PF00360 Phytochrome region LT988_RS09025 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS09025 PF08446 PAS fold LT988_RS09030 PF02954 Bacterial regulatory protein, Fis family LT988_RS09030 PF13188 PAS domain LT988_RS09030 PF13426 PAS domain LT988_RS09040 PF03309 Type III pantothenate kinase LT988_RS09045 PF08279 HTH domain LT988_RS09045 PF02237 Biotin protein ligase C terminal domain LT988_RS09045 PF03099 Biotin/lipoate A/B protein ligase family LT988_RS09055 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LT988_RS09060 PF00270 DEAD/DEAH box helicase LT988_RS09060 PF00271 Helicase conserved C-terminal domain LT988_RS09075 PF02547 Queuosine biosynthesis protein LT988_RS09080 PF07075 Protein of unknown function (DUF1343) LT988_RS09085 PF00672 HAMP domain LT988_RS09085 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS09085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS09090 PF00072 Response regulator receiver domain LT988_RS09090 PF00486 Transcriptional regulatory protein, C terminal LT988_RS09095 PF13180 PDZ domain LT988_RS09130 PF00563 EAL domain LT988_RS09130 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS09130 PF03707 Bacterial signalling protein N terminal repeat LT988_RS09135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LT988_RS09135 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LT988_RS09140 PF13183 4Fe-4S dicluster domain LT988_RS09140 PF02754 Cysteine-rich domain LT988_RS09145 PF01565 FAD binding domain LT988_RS09150 PF01330 RuvA N terminal domain LT988_RS09150 PF07499 RuvA, C-terminal domain LT988_RS09155 PF02075 Crossover junction endodeoxyribonuclease RuvC LT988_RS09160 PF01709 Transcriptional regulator LT988_RS09175 PF07072 Cell division protein LT988_RS09180 PF03884 DNA gyrase inhibitor YacG LT988_RS09185 PF00293 NUDIX domain LT988_RS09190 PF01960 ArgJ family LT988_RS09195 PF07516 SecA Wing and Scaffold domain LT988_RS09195 PF01043 SecA preprotein cross-linking domain LT988_RS09195 PF07517 SecA DEAD-like domain LT988_RS09195 PF02810 SEC-C motif LT988_RS09200 PF01551 Peptidase family M23 LT988_RS09200 PF08525 Opacity-associated protein A N-terminal motif LT988_RS09200 PF01476 LysM domain LT988_RS09210 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LT988_RS09215 PF12327 FtsZ family, C-terminal domain LT988_RS09215 PF00091 Tubulin/FtsZ family, GTPase domain LT988_RS09220 PF02491 SHS2 domain inserted in FTSA LT988_RS09225 PF08478 POTRA domain, FtsQ-type LT988_RS09225 PF03799 Cell division protein FtsQ LT988_RS09230 PF07478 D-ala D-ala ligase C-terminus LT988_RS09230 PF01820 D-ala D-ala ligase N-terminus LT988_RS09235 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LT988_RS09235 PF01565 FAD binding domain LT988_RS09240 PF08245 Mur ligase middle domain LT988_RS09240 PF02875 Mur ligase family, glutamate ligase domain LT988_RS09240 PF01225 Mur ligase family, catalytic domain LT988_RS09245 PF04101 Glycosyltransferase family 28 C-terminal domain LT988_RS09245 PF03033 Glycosyltransferase family 28 N-terminal domain LT988_RS09250 PF01098 Cell cycle protein LT988_RS09255 PF02875 Mur ligase family, glutamate ligase domain LT988_RS09255 PF08245 Mur ligase middle domain LT988_RS09260 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LT988_RS09260 PF00953 Glycosyl transferase family 4 LT988_RS09265 PF01225 Mur ligase family, catalytic domain LT988_RS09265 PF08245 Mur ligase middle domain LT988_RS09265 PF02875 Mur ligase family, glutamate ligase domain LT988_RS09270 PF01225 Mur ligase family, catalytic domain LT988_RS09270 PF02875 Mur ligase family, glutamate ligase domain LT988_RS09270 PF08245 Mur ligase middle domain LT988_RS09275 PF03717 Penicillin-binding Protein dimerisation domain LT988_RS09275 PF00905 Penicillin binding protein transpeptidase domain LT988_RS09280 PF04999 Cell division protein FtsL LT988_RS09285 PF01795 MraW methylase family LT988_RS09290 PF02381 MraZ protein, putative antitoxin-like LT988_RS09300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LT988_RS09305 PF04348 LppC putative lipoprotein LT988_RS09310 PF02021 Uncharacterised protein family UPF0102 LT988_RS09315 PF04972 BON domain LT988_RS09320 PF02913 FAD linked oxidases, C-terminal domain LT988_RS09320 PF01565 FAD binding domain LT988_RS09325 PF01590 GAF domain LT988_RS09325 PF05524 PEP-utilising enzyme, N-terminal LT988_RS09325 PF00391 PEP-utilising enzyme, mobile domain LT988_RS09325 PF02896 PEP-utilising enzyme, TIM barrel domain LT988_RS09330 PF00293 NUDIX domain LT988_RS09350 PF00534 Glycosyl transferases group 1 LT988_RS09350 PF13439 Glycosyltransferase Family 4 LT988_RS09355 PF01569 PAP2 superfamily LT988_RS09365 PF03167 Uracil DNA glycosylase superfamily LT988_RS09370 PF00682 HMGL-like LT988_RS09370 PF08502 LeuA allosteric (dimerisation) domain LT988_RS09375 PF00004 ATPase family associated with various cellular activities (AAA) LT988_RS09375 PF17862 AAA+ lid domain LT988_RS09375 PF01434 Peptidase family M41 LT988_RS09380 PF01556 DnaJ C terminal domain LT988_RS09380 PF00226 DnaJ domain LT988_RS09390 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LT988_RS09390 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LT988_RS09400 PF01510 N-acetylmuramoyl-L-alanine amidase LT988_RS09415 PF01066 CDP-alcohol phosphatidyltransferase LT988_RS09425 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LT988_RS09425 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LT988_RS09425 PF00037 4Fe-4S binding domain LT988_RS09430 PF13237 4Fe-4S dicluster domain LT988_RS09430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LT988_RS09430 PF00384 Molybdopterin oxidoreductase LT988_RS09430 PF01568 Molydopterin dinucleotide binding domain LT988_RS09430 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LT988_RS09435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LT988_RS09445 PF00374 Nickel-dependent hydrogenase LT988_RS09470 PF00923 Transaldolase/Fructose-6-phosphate aldolase LT988_RS09475 PF00398 Ribosomal RNA adenine dimethylase LT988_RS09480 PF02190 ATP-dependent protease La (LON) substrate-binding domain LT988_RS09480 PF05362 Lon protease (S16) C-terminal proteolytic domain LT988_RS09480 PF00004 ATPase family associated with various cellular activities (AAA) LT988_RS09485 PF04321 RmlD substrate binding domain LT988_RS09490 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LT988_RS09495 PF00483 Nucleotidyl transferase LT988_RS09500 PF16363 GDP-mannose 4,6 dehydratase LT988_RS09505 PF00436 Single-strand binding protein family LT988_RS09510 PF07690 Major Facilitator Superfamily LT988_RS09520 PF00005 ABC transporter LT988_RS09520 PF17755 UvrA DNA-binding domain LT988_RS09520 PF17760 UvrA interaction domain LT988_RS09535 PF02560 Cyanate lyase C-terminal domain LT988_RS09540 PF00005 ABC transporter LT988_RS09545 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS09560 PF00196 Bacterial regulatory proteins, luxR family LT988_RS09560 PF00072 Response regulator receiver domain LT988_RS09565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS09565 PF07730 Histidine kinase LT988_RS09565 PF05231 MASE1 LT988_RS09585 PF09382 RQC domain LT988_RS09585 PF16124 RecQ zinc-binding LT988_RS09585 PF00271 Helicase conserved C-terminal domain LT988_RS09585 PF00270 DEAD/DEAH box helicase LT988_RS09585 PF00570 HRDC domain LT988_RS09590 PF02541 Ppx/GppA phosphatase family LT988_RS09635 PF01329 Pterin 4 alpha carbinolamine dehydratase LT988_RS09645 PF01895 PhoU domain LT988_RS09650 PF00005 ABC transporter LT988_RS09655 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS09660 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS09675 PF13439 Glycosyltransferase Family 4 LT988_RS09675 PF00534 Glycosyl transferases group 1 LT988_RS09680 PF00692 dUTPase LT988_RS09690 PF10609 NUBPL iron-transfer P-loop NTPase LT988_RS09695 PF09334 tRNA synthetases class I (M) LT988_RS09695 PF01588 Putative tRNA binding domain LT988_RS09700 PF02508 Rnf-Nqr subunit, membrane protein LT988_RS09705 PF04060 Putative Fe-S cluster LT988_RS09710 PF13375 RnfC Barrel sandwich hybrid domain LT988_RS09710 PF10531 SLBB domain LT988_RS09710 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LT988_RS09710 PF12838 4Fe-4S dicluster domain LT988_RS09715 PF03116 NQR2, RnfD, RnfE family LT988_RS09720 PF04205 FMN-binding domain LT988_RS09725 PF02508 Rnf-Nqr subunit, membrane protein LT988_RS09730 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LT988_RS09730 PF00672 HAMP domain LT988_RS09730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS09730 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS09730 PF01627 Hpt domain LT988_RS09730 PF00072 Response regulator receiver domain LT988_RS09735 PF00485 Phosphoribulokinase / Uridine kinase family LT988_RS09740 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LT988_RS09750 PF03471 Transporter associated domain LT988_RS09750 PF00571 CBS domain LT988_RS09755 PF02130 Uncharacterized protein family UPF0054 LT988_RS09775 PF04055 Radical SAM superfamily LT988_RS09775 PF01938 TRAM domain LT988_RS09775 PF00919 Uncharacterized protein family UPF0004 LT988_RS09795 PF00563 EAL domain LT988_RS09795 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS09795 PF03707 Bacterial signalling protein N terminal repeat LT988_RS09815 PF18764 Nitrous oxide reductase propeller repeat LT988_RS09815 PF13473 Cupredoxin-like domain LT988_RS09815 PF18793 Nitrous oxide reductase propeller repeat 2 LT988_RS09820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LT988_RS09835 PF05048 Periplasmic copper-binding protein (NosD) LT988_RS09840 PF12838 4Fe-4S dicluster domain LT988_RS09840 PF12800 4Fe-4S binding domain LT988_RS09845 PF12801 4Fe-4S binding domain LT988_RS09845 PF13237 4Fe-4S dicluster domain LT988_RS09850 PF00005 ABC transporter LT988_RS09880 PF01420 Type I restriction modification DNA specificity domain LT988_RS09900 PF11867 Domain of unknown function (DUF3387) LT988_RS09900 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LT988_RS09900 PF18766 SWI2/SNF2 ATPase LT988_RS09910 PF00155 Aminotransferase class I and II LT988_RS09915 PF12344 Ultra-violet resistance protein B LT988_RS09915 PF00271 Helicase conserved C-terminal domain LT988_RS09915 PF04851 Type III restriction enzyme, res subunit LT988_RS09915 PF17757 UvrB interaction domain LT988_RS09915 PF02151 UvrB/uvrC motif LT988_RS09925 PF01126 Heme oxygenase LT988_RS09930 PF00912 Transglycosylase LT988_RS09935 PF00793 DAHP synthetase I family LT988_RS09960 PF13085 2Fe-2S iron-sulfur cluster binding domain LT988_RS09960 PF13183 4Fe-4S dicluster domain LT988_RS09965 PF02910 Fumarate reductase flavoprotein C-term LT988_RS09965 PF00890 FAD binding domain LT988_RS09970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LT988_RS09975 PF01171 PP-loop family LT988_RS09985 PF00550 Phosphopantetheine attachment site LT988_RS09985 PF00698 Acyl transferase domain LT988_RS09985 PF08240 Alcohol dehydrogenase GroES-like domain LT988_RS09985 PF08659 KR domain LT988_RS09985 PF14765 Polyketide synthase dehydratase LT988_RS09990 PF00795 Carbon-nitrogen hydrolase LT988_RS09990 PF00583 Acetyltransferase (GNAT) family LT988_RS10015 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LT988_RS10020 PF00011 Hsp20/alpha crystallin family LT988_RS10025 PF13193 AMP-binding enzyme C-terminal domain LT988_RS10025 PF00501 AMP-binding enzyme LT988_RS10025 PF01553 Acyltransferase LT988_RS10030 PF07690 Major Facilitator Superfamily LT988_RS10035 PF00034 Cytochrome c LT988_RS10040 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LT988_RS10045 PF00144 Beta-lactamase LT988_RS10060 PF00474 Sodium:solute symporter family LT988_RS10090 PF02233 NAD(P) transhydrogenase beta subunit LT988_RS10095 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LT988_RS10100 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LT988_RS10100 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LT988_RS10105 PF03618 Kinase/pyrophosphorylase LT988_RS10115 PF01455 HupF/HypC family LT988_RS10120 PF01750 Hydrogenase maturation protease LT988_RS10135 PF08239 Bacterial SH3 domain LT988_RS10140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LT988_RS10140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LT988_RS10145 PF00202 Aminotransferase class-III LT988_RS10215 PF00872 Transposase, Mutator family LT988_RS10235 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LT988_RS10235 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LT988_RS10245 PF00733 Asparagine synthase LT988_RS10245 PF13537 Glutamine amidotransferase domain LT988_RS10250 PF00462 Glutaredoxin LT988_RS10255 PF00929 Exonuclease LT988_RS10265 PF04333 MlaA lipoprotein LT988_RS10270 PF01979 Amidohydrolase family LT988_RS10280 PF01063 Amino-transferase class IV LT988_RS10285 PF03710 Glutamate-ammonia ligase adenylyltransferase LT988_RS10285 PF08335 GlnD PII-uridylyltransferase LT988_RS10290 PF01263 Aldose 1-epimerase LT988_RS10305 PF00875 DNA photolyase LT988_RS10305 PF03441 FAD binding domain of DNA photolyase LT988_RS10320 PF00011 Hsp20/alpha crystallin family LT988_RS10325 PF00011 Hsp20/alpha crystallin family LT988_RS10330 PF02954 Bacterial regulatory protein, Fis family LT988_RS10330 PF00072 Response regulator receiver domain LT988_RS10330 PF00158 Sigma-54 interaction domain LT988_RS10335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS10335 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS10345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS10345 PF00989 PAS fold LT988_RS10350 PF00582 Universal stress protein family LT988_RS10360 PF00118 TCP-1/cpn60 chaperonin family LT988_RS10365 PF00166 Chaperonin 10 Kd subunit LT988_RS10370 PF04186 FxsA cytoplasmic membrane protein LT988_RS10375 PF03091 CutA1 divalent ion tolerance protein LT988_RS10380 PF11412 Disulphide bond corrector protein DsbC LT988_RS10380 PF02683 Cytochrome C biogenesis protein transmembrane region LT988_RS10385 PF08534 Redoxin LT988_RS10390 PF01220 Dehydroquinase class II LT988_RS10395 PF00364 Biotin-requiring enzyme LT988_RS10400 PF00289 Biotin carboxylase, N-terminal domain LT988_RS10400 PF02785 Biotin carboxylase C-terminal domain LT988_RS10400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LT988_RS10410 PF01207 Dihydrouridine synthase (Dus) LT988_RS10415 PF02954 Bacterial regulatory protein, Fis family LT988_RS10420 PF02142 MGS-like domain LT988_RS10420 PF01808 AICARFT/IMPCHase bienzyme LT988_RS10425 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LT988_RS10425 PF00132 Bacterial transferase hexapeptide (six repeats) LT988_RS10430 PF02844 Phosphoribosylglycinamide synthetase, N domain LT988_RS10430 PF02843 Phosphoribosylglycinamide synthetase, C domain LT988_RS10430 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LT988_RS10435 PF00271 Helicase conserved C-terminal domain LT988_RS10435 PF00176 SNF2 family N-terminal domain LT988_RS10455 PF00872 Transposase, Mutator family LT988_RS10525 PF00665 Integrase core domain LT988_RS10525 PF13333 Integrase core domain LT988_RS10525 PF13276 HTH-like domain LT988_RS10545 PF00106 short chain dehydrogenase LT988_RS10550 PF09361 Phasin protein LT988_RS10555 PF05233 PHB accumulation regulatory domain LT988_RS10555 PF07879 PHB/PHA accumulation regulator DNA-binding domain LT988_RS10560 PF02803 Thiolase, C-terminal domain LT988_RS10560 PF00108 Thiolase, N-terminal domain LT988_RS10565 PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) LT988_RS10570 PF00561 alpha/beta hydrolase fold LT988_RS10590 PF07726 ATPase family associated with various cellular activities (AAA) LT988_RS10590 PF17863 AAA lid domain LT988_RS10605 PF03099 Biotin/lipoate A/B protein ligase family LT988_RS10610 PF04359 Protein of unknown function (DUF493) LT988_RS10615 PF00768 D-alanyl-D-alanine carboxypeptidase LT988_RS10615 PF07943 Penicillin-binding protein 5, C-terminal domain LT988_RS10620 PF13406 Transglycosylase SLT domain LT988_RS10625 PF01098 Cell cycle protein LT988_RS10630 PF00905 Penicillin binding protein transpeptidase domain LT988_RS10630 PF03717 Penicillin-binding Protein dimerisation domain LT988_RS10640 PF04085 rod shape-determining protein MreC LT988_RS10650 PF04362 Bacterial Fe(2+) trafficking LT988_RS10660 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LT988_RS10700 PF00873 AcrB/AcrD/AcrF family LT988_RS10710 PF00085 Thioredoxin LT988_RS10720 PF00490 Delta-aminolevulinic acid dehydratase LT988_RS10725 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LT988_RS10725 PF01488 Shikimate / quinate 5-dehydrogenase LT988_RS10725 PF08501 Shikimate dehydrogenase substrate binding domain LT988_RS10730 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LT988_RS10730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LT988_RS10760 PF00149 Calcineurin-like phosphoesterase LT988_RS10765 PF00857 Isochorismatase family LT988_RS10795 PF00158 Sigma-54 interaction domain LT988_RS10795 PF01590 GAF domain LT988_RS10800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT988_RS10800 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS10800 PF00403 Heavy-metal-associated domain LT988_RS10805 PF00175 Oxidoreductase NAD-binding domain LT988_RS10805 PF00970 Oxidoreductase FAD-binding domain LT988_RS10805 PF00042 Globin LT988_RS10815 PF00857 Isochorismatase family LT988_RS10830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT988_RS10845 PF00561 alpha/beta hydrolase fold LT988_RS10850 PF00561 alpha/beta hydrolase fold LT988_RS10865 PF00144 Beta-lactamase LT988_RS10880 PF00582 Universal stress protein family LT988_RS10885 PF00999 Sodium/hydrogen exchanger family LT988_RS10890 PF00689 Cation transporting ATPase, C-terminus LT988_RS10890 PF00690 Cation transporter/ATPase, N-terminus LT988_RS10925 PF09086 Domain of unknown function (DUF1924) LT988_RS10955 PF02525 Flavodoxin-like fold LT988_RS10960 PF02254 TrkA-N domain LT988_RS10960 PF00999 Sodium/hydrogen exchanger family LT988_RS10965 PF04241 Protein of unknown function (DUF423) LT988_RS10970 PF04452 RNA methyltransferase LT988_RS10980 PF00072 Response regulator receiver domain LT988_RS10985 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LT988_RS10985 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LT988_RS10990 PF02424 ApbE family LT988_RS10995 PF03544 Gram-negative bacterial TonB protein C-terminal LT988_RS11000 PF02622 Uncharacterized ACR, COG1678 LT988_RS11005 PF03652 Holliday junction resolvase LT988_RS11010 PF00156 Phosphoribosyl transferase domain LT988_RS11015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LT988_RS11015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LT988_RS11020 PF01979 Amidohydrolase family LT988_RS11030 PF01467 Cytidylyltransferase-like LT988_RS11030 PF00294 pfkB family carbohydrate kinase LT988_RS11035 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LT988_RS11045 PF00899 ThiF family LT988_RS11045 PF00581 Rhodanese-like domain LT988_RS11055 PF00999 Sodium/hydrogen exchanger family LT988_RS11055 PF02254 TrkA-N domain LT988_RS11060 PF00999 Sodium/hydrogen exchanger family LT988_RS11060 PF02254 TrkA-N domain LT988_RS11070 PF03109 ABC1 family LT988_RS11075 PF03880 DbpA RNA binding domain LT988_RS11075 PF00270 DEAD/DEAH box helicase LT988_RS11075 PF12343 Cold shock protein DEAD box A LT988_RS11075 PF00271 Helicase conserved C-terminal domain LT988_RS11085 PF00731 AIR carboxylase LT988_RS11090 PF02222 ATP-grasp domain LT988_RS11090 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LT988_RS11095 PF00563 EAL domain LT988_RS11095 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS11095 PF03707 Bacterial signalling protein N terminal repeat LT988_RS11100 PF00563 EAL domain LT988_RS11100 PF03707 Bacterial signalling protein N terminal repeat LT988_RS11100 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS11105 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LT988_RS11105 PF00361 Proton-conducting membrane transporter LT988_RS11105 PF13244 Domain of unknown function (DUF4040) LT988_RS11105 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LT988_RS11110 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LT988_RS11115 PF00361 Proton-conducting membrane transporter LT988_RS11120 PF01899 Na+/H+ ion antiporter subunit LT988_RS11125 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LT988_RS11130 PF03334 Na+/H+ antiporter subunit LT988_RS11135 PF05378 Hydantoinase/oxoprolinase N-terminal region LT988_RS11135 PF01968 Hydantoinase/oxoprolinase LT988_RS11140 PF01610 Transposase LT988_RS11140 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LT988_RS11140 PF13542 Helix-turn-helix domain of transposase family ISL3 LT988_RS11155 PF00005 ABC transporter LT988_RS11165 PF00005 ABC transporter LT988_RS11165 PF12399 Branched-chain amino acid ATP-binding cassette transporter LT988_RS11175 PF02653 Branched-chain amino acid transport system / permease component LT988_RS11180 PF02954 Bacterial regulatory protein, Fis family LT988_RS11180 PF13188 PAS domain LT988_RS11180 PF00158 Sigma-54 interaction domain LT988_RS11195 PF03466 LysR substrate binding domain LT988_RS11195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT988_RS11200 PF00902 Sec-independent protein translocase protein (TatC) LT988_RS11205 PF02416 mttA/Hcf106 family LT988_RS11210 PF02416 mttA/Hcf106 family LT988_RS11215 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LT988_RS11220 PF01502 Phosphoribosyl-AMP cyclohydrolase LT988_RS11225 PF00977 Histidine biosynthesis protein LT988_RS11230 PF00475 Imidazoleglycerol-phosphate dehydratase LT988_RS11235 PF01180 Dihydroorotate dehydrogenase LT988_RS11250 PF00535 Glycosyl transferase family 2 LT988_RS11260 PF02637 GatB domain LT988_RS11260 PF02934 GatB/GatE catalytic domain LT988_RS11265 PF01425 Amidase LT988_RS11270 PF02686 Glu-tRNAGln amidotransferase C subunit LT988_RS11280 PF00589 Phage integrase family LT988_RS11365 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS11370 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS11375 PF00005 ABC transporter LT988_RS11375 PF17912 MalK OB fold domain LT988_RS11380 PF03030 Inorganic H+ pyrophosphatase LT988_RS11385 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LT988_RS11385 PF00132 Bacterial transferase hexapeptide (six repeats) LT988_RS11395 PF01189 16S rRNA methyltransferase RsmB/F LT988_RS11395 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LT988_RS11395 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LT988_RS11400 PF08443 RimK-like ATP-grasp domain LT988_RS11400 PF18030 RimK PreATP-grasp domain LT988_RS11400 PF02080 TrkA-C domain LT988_RS11410 PF01546 Peptidase family M20/M25/M40 LT988_RS11410 PF07687 Peptidase dimerisation domain LT988_RS11415 PF04228 Putative neutral zinc metallopeptidase LT988_RS11430 PF00206 Lyase LT988_RS11430 PF14698 Argininosuccinate lyase C-terminal LT988_RS11435 PF04397 LytTr DNA-binding domain LT988_RS11435 PF00072 Response regulator receiver domain LT988_RS11445 PF00733 Asparagine synthase LT988_RS11445 PF13537 Glutamine amidotransferase domain LT988_RS11450 PF13439 Glycosyltransferase Family 4 LT988_RS11460 PF08447 PAS fold LT988_RS11460 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS11460 PF00563 EAL domain LT988_RS11460 PF08448 PAS fold LT988_RS11465 PF13439 Glycosyltransferase Family 4 LT988_RS11465 PF00534 Glycosyl transferases group 1 LT988_RS11480 PF13439 Glycosyltransferase Family 4 LT988_RS11480 PF00534 Glycosyl transferases group 1 LT988_RS11490 PF03658 RnfH family Ubiquitin LT988_RS11495 PF02508 Rnf-Nqr subunit, membrane protein LT988_RS11500 PF04205 FMN-binding domain LT988_RS11505 PF03116 NQR2, RnfD, RnfE family LT988_RS11510 PF10531 SLBB domain LT988_RS11510 PF13237 4Fe-4S dicluster domain LT988_RS11510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LT988_RS11510 PF13375 RnfC Barrel sandwich hybrid domain LT988_RS11515 PF04060 Putative Fe-S cluster LT988_RS11520 PF02508 Rnf-Nqr subunit, membrane protein LT988_RS11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS11525 PF00989 PAS fold LT988_RS11530 PF13185 GAF domain LT988_RS11530 PF02954 Bacterial regulatory protein, Fis family LT988_RS11530 PF00158 Sigma-54 interaction domain LT988_RS11540 PF00873 AcrB/AcrD/AcrF family LT988_RS11545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LT988_RS11560 PF02311 AraC-like ligand binding domain LT988_RS11560 PF12833 Helix-turn-helix domain LT988_RS11565 PF00270 DEAD/DEAH box helicase LT988_RS11565 PF08494 DEAD/H associated LT988_RS11565 PF00271 Helicase conserved C-terminal domain LT988_RS11575 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS11575 PF08447 PAS fold LT988_RS11575 PF00563 EAL domain LT988_RS11575 PF08448 PAS fold LT988_RS11580 PF00571 CBS domain LT988_RS11580 PF00005 ABC transporter LT988_RS11585 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS11590 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LT988_RS11600 PF02028 BCCT, betaine/carnitine/choline family transporter LT988_RS11635 PF04972 BON domain LT988_RS11635 PF01476 LysM domain LT988_RS11675 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS11675 PF01627 Hpt domain LT988_RS11675 PF00072 Response regulator receiver domain LT988_RS11675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LT988_RS11675 PF00672 HAMP domain LT988_RS11675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS11695 PF00072 Response regulator receiver domain LT988_RS11695 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS11710 PF04255 Protein of unknown function (DUF433) LT988_RS11765 PF00072 Response regulator receiver domain LT988_RS11765 PF00196 Bacterial regulatory proteins, luxR family LT988_RS11770 PF00924 Mechanosensitive ion channel LT988_RS11775 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LT988_RS11775 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LT988_RS11775 PF06827 Zinc finger found in FPG and IleRS LT988_RS11795 PF00005 ABC transporter LT988_RS11805 PF00581 Rhodanese-like domain LT988_RS11810 PF00211 Adenylate and Guanylate cyclase catalytic domain LT988_RS11820 PF00586 AIR synthase related protein, N-terminal domain LT988_RS11820 PF02769 AIR synthase related protein, C-terminal domain LT988_RS11825 PF01924 Hydrogenase formation hypA family LT988_RS11830 PF01455 HupF/HypC family LT988_RS11840 PF05175 Methyltransferase small domain LT988_RS11855 PF00072 Response regulator receiver domain LT988_RS11855 PF00486 Transcriptional regulatory protein, C terminal LT988_RS11860 PF00672 HAMP domain LT988_RS11860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS11860 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS11865 PF00578 AhpC/TSA family LT988_RS11880 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS11880 PF17149 Periplasmic sensor domain found in signal transduction proteins LT988_RS11880 PF00672 HAMP domain LT988_RS11880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS11880 PF01627 Hpt domain LT988_RS11880 PF00072 Response regulator receiver domain LT988_RS11905 PF17284 Spermidine synthase tetramerisation domain LT988_RS11910 PF00909 Ammonium Transporter Family LT988_RS11915 PF00909 Ammonium Transporter Family LT988_RS11920 PF00543 Nitrogen regulatory protein P-II LT988_RS11930 PF04380 Membrane fusogenic activity LT988_RS11935 PF13335 Magnesium chelatase, subunit ChlI C-terminal LT988_RS11935 PF01078 Magnesium chelatase, subunit ChlI LT988_RS11940 PF12848 ABC transporter LT988_RS11940 PF00005 ABC transporter LT988_RS11945 PF00343 Carbohydrate phosphorylase LT988_RS11950 PF00072 Response regulator receiver domain LT988_RS11950 PF00486 Transcriptional regulatory protein, C terminal LT988_RS11960 PF01740 STAS domain LT988_RS11965 PF02563 Polysaccharide biosynthesis/export protein LT988_RS11985 PF13439 Glycosyltransferase Family 4 LT988_RS11985 PF00534 Glycosyl transferases group 1 LT988_RS12025 PF07963 Prokaryotic N-terminal methylation motif LT988_RS12025 PF00114 Pilin (bacterial filament) LT988_RS12035 PF00534 Glycosyl transferases group 1 LT988_RS12035 PF13439 Glycosyltransferase Family 4 LT988_RS12040 PF13439 Glycosyltransferase Family 4 LT988_RS12040 PF00534 Glycosyl transferases group 1 LT988_RS12060 PF00132 Bacterial transferase hexapeptide (six repeats) LT988_RS12065 PF03808 Glycosyl transferase WecB/TagA/CpsF family LT988_RS12070 PF02397 Bacterial sugar transferase LT988_RS12075 PF00483 Nucleotidyl transferase LT988_RS12095 PF00114 Pilin (bacterial filament) LT988_RS12095 PF07963 Prokaryotic N-terminal methylation motif LT988_RS12110 PF03747 ADP-ribosylglycohydrolase LT988_RS12115 PF04891 NifQ LT988_RS12120 PF00111 2Fe-2S iron-sulfur cluster binding domain LT988_RS12125 PF00111 2Fe-2S iron-sulfur cluster binding domain LT988_RS12130 PF00258 Flavodoxin LT988_RS12130 PF00753 Metallo-beta-lactamase superfamily LT988_RS12135 PF03960 ArsC family LT988_RS12140 PF12838 4Fe-4S dicluster domain LT988_RS12145 PF02579 Dinitrogenase iron-molybdenum cofactor LT988_RS12145 PF04055 Radical SAM superfamily LT988_RS12150 PF06167 Glucose-regulated metallo-peptidase M90 LT988_RS12155 PF02630 SCO1/SenC LT988_RS12160 PF04314 Copper chaperone PCu(A)C LT988_RS12165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LT988_RS12180 PF00072 Response regulator receiver domain LT988_RS12180 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS12180 PF00563 EAL domain LT988_RS12185 PF01964 Radical SAM ThiC family LT988_RS12185 PF13667 ThiC-associated domain LT988_RS12195 PF00679 Elongation factor G C-terminus LT988_RS12195 PF03144 Elongation factor Tu domain 2 LT988_RS12195 PF00009 Elongation factor Tu GTP binding domain LT988_RS12200 PF00561 alpha/beta hydrolase fold LT988_RS12220 PF01636 Phosphotransferase enzyme family LT988_RS12225 PF04607 Region found in RelA / SpoT proteins LT988_RS12225 PF02824 TGS domain LT988_RS12225 PF13291 ACT domain LT988_RS12265 PF04055 Radical SAM superfamily LT988_RS12265 PF11842 Domain of unknown function (DUF3362) LT988_RS12265 PF08497 Radical SAM N-terminal LT988_RS12270 PF04545 Sigma-70, region 4 LT988_RS12270 PF04542 Sigma-70 region 2 LT988_RS12275 PF00486 Transcriptional regulatory protein, C terminal LT988_RS12275 PF00072 Response regulator receiver domain LT988_RS12280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS12280 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS12280 PF08448 PAS fold LT988_RS12280 PF00072 Response regulator receiver domain LT988_RS12280 PF13188 PAS domain LT988_RS12285 PF00939 Sodium:sulfate symporter transmembrane region LT988_RS12290 PF18075 FtsX extracellular domain LT988_RS12295 PF00005 ABC transporter LT988_RS12300 PF00448 SRP54-type protein, GTPase domain LT988_RS12300 PF02881 SRP54-type protein, helical bundle domain LT988_RS12305 PF00675 Insulinase (Peptidase family M16) LT988_RS12305 PF05193 Peptidase M16 inactive domain LT988_RS12310 PF00675 Insulinase (Peptidase family M16) LT988_RS12310 PF05193 Peptidase M16 inactive domain LT988_RS12320 PF01467 Cytidylyltransferase-like LT988_RS12325 PF00037 4Fe-4S binding domain LT988_RS12350 PF00571 CBS domain LT988_RS12350 PF01595 Cyclin M transmembrane N-terminal domain LT988_RS12350 PF03471 Transporter associated domain LT988_RS12355 PF01595 Cyclin M transmembrane N-terminal domain LT988_RS12355 PF03471 Transporter associated domain LT988_RS12355 PF00571 CBS domain LT988_RS12370 PF01569 PAP2 superfamily LT988_RS12375 PF05194 UreE urease accessory protein, C-terminal domain LT988_RS12375 PF02814 UreE urease accessory protein, N-terminal domain LT988_RS12380 PF01730 UreF LT988_RS12385 PF02492 CobW/HypB/UreG, nucleotide-binding domain LT988_RS12390 PF02391 MoaE protein LT988_RS12410 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LT988_RS12415 PF02806 Alpha amylase, C-terminal all-beta domain LT988_RS12415 PF00128 Alpha amylase, catalytic domain LT988_RS12415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LT988_RS12420 PF00483 Nucleotidyl transferase LT988_RS12425 PF05690 Thiazole biosynthesis protein ThiG LT988_RS12425 PF02597 ThiS family LT988_RS12430 PF05690 Thiazole biosynthesis protein ThiG LT988_RS12435 PF02390 Putative methyltransferase LT988_RS12440 PF00005 ABC transporter LT988_RS12440 PF08402 TOBE domain LT988_RS12445 PF03649 Uncharacterised protein family (UPF0014) LT988_RS12485 PF01728 FtsJ-like methyltransferase LT988_RS12505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LT988_RS12505 PF17810 Arginine decarboxylase helical bundle domain LT988_RS12505 PF17944 Arginine decarboxylase C-terminal helical extension LT988_RS12510 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LT988_RS12515 PF02492 CobW/HypB/UreG, nucleotide-binding domain LT988_RS12530 PF00535 Glycosyl transferase family 2 LT988_RS12540 PF01370 NAD dependent epimerase/dehydratase family LT988_RS12635 PF01380 SIS domain LT988_RS12640 PF00132 Bacterial transferase hexapeptide (six repeats) LT988_RS12640 PF12804 MobA-like NTP transferase domain LT988_RS12645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LT988_RS12650 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LT988_RS12650 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LT988_RS12655 PF02874 ATP synthase alpha/beta family, beta-barrel domain LT988_RS12655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT988_RS12660 PF00231 ATP synthase LT988_RS12665 PF02874 ATP synthase alpha/beta family, beta-barrel domain LT988_RS12665 PF00306 ATP synthase alpha/beta chain, C terminal domain LT988_RS12665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT988_RS12670 PF00213 ATP synthase delta (OSCP) subunit LT988_RS12675 PF00430 ATP synthase B/B' CF(0) LT988_RS12680 PF00137 ATP synthase subunit C LT988_RS12685 PF00119 ATP synthase A chain LT988_RS12690 PF03899 ATP synthase I chain LT988_RS12695 PF17762 HTH domain found in ParB protein LT988_RS12695 PF02195 ParB-like nuclease domain LT988_RS12700 PF13614 AAA domain LT988_RS12705 PF02527 rRNA small subunit methyltransferase G LT988_RS12710 PF01134 Glucose inhibited division protein A LT988_RS12710 PF13932 GidA associated domain LT988_RS12715 PF07726 ATPase family associated with various cellular activities (AAA) LT988_RS12715 PF17863 AAA lid domain LT988_RS12730 PF01926 50S ribosome-binding GTPase LT988_RS12730 PF12631 MnmE helical domain LT988_RS12730 PF10396 GTP-binding protein TrmE N-terminus LT988_RS12735 PF14849 YidC periplasmic domain LT988_RS12735 PF02096 60Kd inner membrane protein LT988_RS12740 PF01809 Putative membrane protein insertion efficiency factor LT988_RS12745 PF00825 Ribonuclease P LT988_RS12750 PF00468 Ribosomal protein L34 LT988_RS12755 PF00308 Bacterial dnaA protein LT988_RS12755 PF08299 Bacterial dnaA protein helix-turn-helix LT988_RS12755 PF11638 DnaA N-terminal domain LT988_RS12760 PF00712 DNA polymerase III beta subunit, N-terminal domain LT988_RS12760 PF02767 DNA polymerase III beta subunit, central domain LT988_RS12760 PF02768 DNA polymerase III beta subunit, C-terminal domain LT988_RS12765 PF02463 RecF/RecN/SMC N terminal domain LT988_RS12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS12770 PF18053 DNA gyrase B subunit insert domain LT988_RS12770 PF01751 Toprim domain LT988_RS12770 PF00204 DNA gyrase B LT988_RS12770 PF00986 DNA gyrase B subunit, carboxyl terminus LT988_RS12785 PF05746 DALR anticodon binding domain LT988_RS12785 PF02092 Glycyl-tRNA synthetase beta subunit LT988_RS12790 PF02091 Glycyl-tRNA synthetase alpha subunit LT988_RS12795 PF16916 Dimerisation domain of Zinc Transporter LT988_RS12795 PF01545 Cation efflux family LT988_RS12800 PF00120 Glutamine synthetase, catalytic domain LT988_RS12800 PF03951 Glutamine synthetase, beta-Grasp domain LT988_RS12810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS12810 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS12810 PF00989 PAS fold LT988_RS12815 PF02954 Bacterial regulatory protein, Fis family LT988_RS12815 PF00072 Response regulator receiver domain LT988_RS12815 PF00158 Sigma-54 interaction domain LT988_RS12830 PF00588 SpoU rRNA Methylase family LT988_RS12835 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LT988_RS12835 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LT988_RS12840 PF02556 Preprotein translocase subunit SecB LT988_RS12845 PF00581 Rhodanese-like domain LT988_RS12845 PF12368 Rhodanase C-terminal LT988_RS12845 PF17773 UPF0176 acylphosphatase like domain LT988_RS12855 PF01551 Peptidase family M23 LT988_RS12860 PF13180 PDZ domain LT988_RS12860 PF03572 Peptidase family S41 LT988_RS12865 PF01965 DJ-1/PfpI family LT988_RS12870 PF00953 Glycosyl transferase family 4 LT988_RS12875 PF02719 Polysaccharide biosynthesis protein LT988_RS12880 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LT988_RS12880 PF00437 Type II/IV secretion system protein LT988_RS12885 PF00482 Type II secretion system (T2SS), protein F LT988_RS12890 PF08334 Type II secretion system (T2SS), protein G LT988_RS12890 PF07963 Prokaryotic N-terminal methylation motif LT988_RS12895 PF12019 Type II transport protein GspH LT988_RS12900 PF07963 Prokaryotic N-terminal methylation motif LT988_RS12910 PF03934 Type II secretion system (T2SS), protein K LT988_RS12930 PF00263 Bacterial type II and III secretion system protein LT988_RS12930 PF03958 Bacterial type II/III secretion system short domain LT988_RS12935 PF00437 Type II/IV secretion system protein LT988_RS12955 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LT988_RS12955 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS12960 PF01493 GXGXG motif LT988_RS12960 PF04898 Glutamate synthase central domain LT988_RS12960 PF00310 Glutamine amidotransferases class-II LT988_RS12960 PF01645 Conserved region in glutamate synthase LT988_RS12965 PF01761 3-dehydroquinate synthase LT988_RS12970 PF01202 Shikimate kinase LT988_RS12975 PF11741 AMIN domain LT988_RS12975 PF00263 Bacterial type II and III secretion system protein LT988_RS12975 PF03958 Bacterial type II/III secretion system short domain LT988_RS12975 PF07660 Secretin and TonB N terminus short domain LT988_RS12980 PF04351 Pilus assembly protein, PilP LT988_RS12985 PF04350 Pilus assembly protein, PilO LT988_RS12990 PF05137 Fimbrial assembly protein (PilN) LT988_RS12995 PF11104 Type IV pilus assembly protein PilM; LT988_RS13005 PF00285 Citrate synthase, C-terminal domain LT988_RS13010 PF00056 lactate/malate dehydrogenase, NAD binding domain LT988_RS13010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LT988_RS13015 PF01197 Ribosomal protein L31 LT988_RS13020 PF06969 HemN C-terminal domain LT988_RS13020 PF04055 Radical SAM superfamily LT988_RS13025 PF03480 Bacterial extracellular solute-binding protein, family 7 LT988_RS13030 PF00575 S1 RNA binding domain LT988_RS13035 PF00580 UvrD/REP helicase N-terminal domain LT988_RS13035 PF13361 UvrD-like helicase C-terminal domain LT988_RS13040 PF01208 Uroporphyrinogen decarboxylase (URO-D) LT988_RS13045 PF06039 Malate:quinone oxidoreductase (Mqo) LT988_RS13050 PF01068 ATP dependent DNA ligase domain LT988_RS13050 PF14743 DNA ligase OB-like domain LT988_RS13065 PF00873 AcrB/AcrD/AcrF family LT988_RS13090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS13095 PF00072 Response regulator receiver domain LT988_RS13095 PF00486 Transcriptional regulatory protein, C terminal LT988_RS13110 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system LT988_RS13120 PF01545 Cation efflux family LT988_RS13120 PF16916 Dimerisation domain of Zinc Transporter LT988_RS13155 PF00072 Response regulator receiver domain LT988_RS13155 PF00486 Transcriptional regulatory protein, C terminal LT988_RS13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS13185 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS13210 PF00255 Glutathione peroxidase LT988_RS13215 PF12146 Serine aminopeptidase, S33 LT988_RS13235 PF04357 TamB, inner membrane protein subunit of TAM complex LT988_RS13245 PF00999 Sodium/hydrogen exchanger family LT988_RS13245 PF03471 Transporter associated domain LT988_RS13245 PF02080 TrkA-C domain LT988_RS13260 PF04002 RadC-like JAB domain LT988_RS13265 PF02441 Flavoprotein LT988_RS13265 PF04127 DNA / pantothenate metabolism flavoprotein LT988_RS13270 PF00692 dUTPase LT988_RS13275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LT988_RS13275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LT988_RS13275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LT988_RS13275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LT988_RS13280 PF00696 Amino acid kinase family LT988_RS13285 PF00156 Phosphoribosyl transferase domain LT988_RS13300 PF02594 Uncharacterised ACR, YggU family COG1872 LT988_RS13305 PF02325 YGGT family LT988_RS13310 PF14748 Pyrroline-5-carboxylate reductase dimerisation LT988_RS13310 PF03807 NADP oxidoreductase coenzyme F420-dependent LT988_RS13315 PF01168 Alanine racemase, N-terminal domain LT988_RS13320 PF01725 Ham1 family LT988_RS13325 PF03725 3' exoribonuclease family, domain 2 LT988_RS13325 PF01138 3' exoribonuclease family, domain 1 LT988_RS13330 PF03793 PASTA domain LT988_RS13330 PF00069 Protein kinase domain LT988_RS13335 PF08340 Domain of unknown function (DUF1732) LT988_RS13335 PF03755 YicC-like family, N-terminal region LT988_RS13345 PF01590 GAF domain LT988_RS13345 PF00158 Sigma-54 interaction domain LT988_RS13350 PF00625 Guanylate kinase LT988_RS13360 PF13291 ACT domain LT988_RS13360 PF04607 Region found in RelA / SpoT proteins LT988_RS13360 PF02824 TGS domain LT988_RS13370 PF01218 Coproporphyrinogen III oxidase LT988_RS13380 PF01804 Penicillin amidase LT988_RS13385 PF02580 D-Tyr-tRNA(Tyr) deacylase LT988_RS13405 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS13405 PF00589 Phage integrase family LT988_RS13415 PF01678 Diaminopimelate epimerase LT988_RS13425 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LT988_RS13425 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LT988_RS13450 PF01850 PIN domain LT988_RS13470 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LT988_RS13470 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LT988_RS13470 PF06827 Zinc finger found in FPG and IleRS LT988_RS13480 PF00270 DEAD/DEAH box helicase LT988_RS13480 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LT988_RS13480 PF00271 Helicase conserved C-terminal domain LT988_RS13480 PF17764 3′ DNA-binding domain (3′BD) LT988_RS13480 PF18074 Primosomal protein N C-terminal domain LT988_RS13490 PF03881 Fructosamine kinase LT988_RS13500 PF03764 Elongation factor G, domain IV LT988_RS13500 PF14492 Elongation Factor G, domain II LT988_RS13500 PF03144 Elongation factor Tu domain 2 LT988_RS13500 PF00679 Elongation factor G C-terminus LT988_RS13500 PF00009 Elongation factor Tu GTP binding domain LT988_RS13505 PF17969 L,D-transpeptidase C-terminal domain LT988_RS13505 PF03734 L,D-transpeptidase catalytic domain LT988_RS13540 PF00270 DEAD/DEAH box helicase LT988_RS13540 PF00271 Helicase conserved C-terminal domain LT988_RS13540 PF00570 HRDC domain LT988_RS13540 PF16124 RecQ zinc-binding LT988_RS13540 PF09382 RQC domain LT988_RS13545 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LT988_RS13545 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LT988_RS13550 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LT988_RS13555 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LT988_RS13555 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LT988_RS13560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LT988_RS13565 PF00583 Acetyltransferase (GNAT) family LT988_RS13565 PF13607 Succinyl-CoA ligase like flavodoxin domain LT988_RS13565 PF13380 CoA binding domain LT988_RS13570 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS13570 PF00360 Phytochrome region LT988_RS13570 PF00563 EAL domain LT988_RS13570 PF01590 GAF domain LT988_RS13580 PF02589 LUD domain LT988_RS13585 PF13183 4Fe-4S dicluster domain LT988_RS13585 PF02589 LUD domain LT988_RS13585 PF11870 Domain of unknown function (DUF3390) LT988_RS13600 PF02754 Cysteine-rich domain LT988_RS13605 PF00437 Type II/IV secretion system protein LT988_RS13610 PF00437 Type II/IV secretion system protein LT988_RS13620 PF07715 TonB-dependent Receptor Plug Domain LT988_RS13620 PF00593 TonB dependent receptor LT988_RS13625 PF02661 Fic/DOC family LT988_RS13630 PF03976 Polyphosphate kinase 2 (PPK2) LT988_RS13640 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS13640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT988_RS13645 PF00672 HAMP domain LT988_RS13645 PF02743 Cache domain LT988_RS13645 PF00211 Adenylate and Guanylate cyclase catalytic domain LT988_RS13660 PF03616 Sodium/glutamate symporter LT988_RS13670 PF03600 Citrate transporter LT988_RS13670 PF02080 TrkA-C domain LT988_RS13685 PF02253 Phospholipase A1 LT988_RS13695 PF05524 PEP-utilising enzyme, N-terminal LT988_RS13695 PF00391 PEP-utilising enzyme, mobile domain LT988_RS13695 PF02896 PEP-utilising enzyme, TIM barrel domain LT988_RS13695 PF00381 PTS HPr component phosphorylation site LT988_RS13695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LT988_RS13700 PF00367 phosphotransferase system, EIIB LT988_RS13700 PF02378 Phosphotransferase system, EIIC LT988_RS13705 PF05685 Putative restriction endonuclease LT988_RS13715 PF07497 Rho termination factor, RNA-binding domain LT988_RS13715 PF07498 Rho termination factor, N-terminal domain LT988_RS13715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT988_RS13720 PF00085 Thioredoxin LT988_RS13725 PF12300 ATP-dependent RNA helicase RhlB LT988_RS13725 PF00270 DEAD/DEAH box helicase LT988_RS13725 PF00271 Helicase conserved C-terminal domain LT988_RS13730 PF13419 Haloacid dehalogenase-like hydrolase LT988_RS13735 PF00293 NUDIX domain LT988_RS13745 PF07085 DRTGG domain LT988_RS13745 PF01515 Phosphate acetyl/butaryl transferase LT988_RS13750 PF00871 Acetokinase family LT988_RS13755 PF00691 OmpA family LT988_RS13755 PF05736 OprF membrane domain LT988_RS13760 PF01774 UreD urease accessory protein LT988_RS13765 PF00547 Urease, gamma subunit LT988_RS13770 PF00699 Urease beta subunit LT988_RS13775 PF00449 Urease alpha-subunit, N-terminal domain LT988_RS13775 PF01979 Amidohydrolase family LT988_RS13780 PF00750 tRNA synthetases class I (R) LT988_RS13780 PF05746 DALR anticodon binding domain LT988_RS13780 PF03485 Arginyl tRNA synthetase N terminal domain LT988_RS13790 PF01895 PhoU domain LT988_RS13795 PF00300 Histidine phosphatase superfamily (branch 1) LT988_RS13800 PF03707 Bacterial signalling protein N terminal repeat LT988_RS13800 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS13800 PF00563 EAL domain LT988_RS13805 PF08448 PAS fold LT988_RS13805 PF03705 CheR methyltransferase, all-alpha domain LT988_RS13805 PF01739 CheR methyltransferase, SAM binding domain LT988_RS13805 PF01339 CheB methylesterase LT988_RS13810 PF13581 Histidine kinase-like ATPase domain LT988_RS13810 PF07536 HWE histidine kinase LT988_RS13810 PF13426 PAS domain LT988_RS13820 PF00361 Proton-conducting membrane transporter LT988_RS13825 PF00361 Proton-conducting membrane transporter LT988_RS13845 PF03334 Na+/H+ antiporter subunit LT988_RS13875 PF00012 Hsp70 protein LT988_RS13885 PF12419 SNF2 Helicase protein LT988_RS13885 PF00271 Helicase conserved C-terminal domain LT988_RS13885 PF00176 SNF2 family N-terminal domain LT988_RS13890 PF01476 LysM domain LT988_RS13890 PF04972 BON domain LT988_RS13935 PF05685 Putative restriction endonuclease LT988_RS13940 PF00155 Aminotransferase class I and II LT988_RS13945 PF00815 Histidinol dehydrogenase LT988_RS13950 PF01634 ATP phosphoribosyltransferase LT988_RS13955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LT988_RS13970 PF02470 MlaD protein LT988_RS13975 PF02405 Permease MlaE LT988_RS13980 PF00005 ABC transporter LT988_RS13990 PF00571 CBS domain LT988_RS13990 PF01380 SIS domain LT988_RS14010 PF12399 Branched-chain amino acid ATP-binding cassette transporter LT988_RS14010 PF00005 ABC transporter LT988_RS14015 PF00309 Sigma-54 factor, Activator interacting domain (AID) LT988_RS14015 PF04963 Sigma-54 factor, core binding domain LT988_RS14015 PF04552 Sigma-54, DNA binding domain LT988_RS14020 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LT988_RS14025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LT988_RS14030 PF07475 HPr Serine kinase C-terminal domain LT988_RS14030 PF02603 HPr Serine kinase N terminus LT988_RS14035 PF03668 P-loop ATPase protein family LT988_RS14045 PF00381 PTS HPr component phosphorylation site LT988_RS14050 PF02896 PEP-utilising enzyme, TIM barrel domain LT988_RS14050 PF00391 PEP-utilising enzyme, mobile domain LT988_RS14050 PF05524 PEP-utilising enzyme, N-terminal LT988_RS14055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LT988_RS14055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LT988_RS14055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LT988_RS14055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LT988_RS14065 PF01926 50S ribosome-binding GTPase LT988_RS14075 PF01967 MoaC family LT988_RS14080 PF00719 Inorganic pyrophosphatase LT988_RS14085 PF00365 Phosphofructokinase LT988_RS14090 PF01494 FAD binding domain LT988_RS14095 PF01494 FAD binding domain LT988_RS14100 PF00557 Metallopeptidase family M24 LT988_RS14100 PF05195 Aminopeptidase P, N-terminal domain LT988_RS14105 PF03695 Uncharacterised protein family (UPF0149) LT988_RS14115 PF05164 Cell division protein ZapA LT988_RS14125 PF01812 5-formyltetrahydrofolate cyclo-ligase family LT988_RS14130 PF00291 Pyridoxal-phosphate dependent enzyme LT988_RS14130 PF00585 C-terminal regulatory domain of Threonine dehydratase LT988_RS14135 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LT988_RS14145 PF00267 Gram-negative porin LT988_RS14155 PF00380 Ribosomal protein S9/S16 LT988_RS14160 PF00572 Ribosomal protein L13 LT988_RS14175 PF03232 Ubiquinone biosynthesis protein COQ7 LT988_RS14180 PF02675 S-adenosylmethionine decarboxylase LT988_RS14190 PF13545 Crp-like helix-turn-helix domain LT988_RS14190 PF00027 Cyclic nucleotide-binding domain LT988_RS14195 PF00218 Indole-3-glycerol phosphate synthase LT988_RS14200 PF02885 Glycosyl transferase family, helical bundle domain LT988_RS14200 PF00591 Glycosyl transferase family, a/b domain LT988_RS14205 PF00117 Glutamine amidotransferase class-I LT988_RS14215 PF04715 Anthranilate synthase component I, N terminal region LT988_RS14215 PF00425 chorismate binding enzyme LT988_RS14220 PF13419 Haloacid dehalogenase-like hydrolase LT988_RS14225 PF00834 Ribulose-phosphate 3 epimerase family LT988_RS14230 PF00226 DnaJ domain LT988_RS14230 PF05099 Tellurite resistance protein TerB LT988_RS14260 PF00672 HAMP domain LT988_RS14260 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS14260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS14265 PF00486 Transcriptional regulatory protein, C terminal LT988_RS14265 PF00072 Response regulator receiver domain LT988_RS14275 PF00248 Aldo/keto reductase family LT988_RS14285 PF00294 pfkB family carbohydrate kinase LT988_RS14290 PF03781 Sulfatase-modifying factor enzyme 1 LT988_RS14325 PF00561 alpha/beta hydrolase fold LT988_RS14330 PF00924 Mechanosensitive ion channel LT988_RS14335 PF01292 Prokaryotic cytochrome b561 LT988_RS14340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT988_RS14340 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS14390 PF04012 PspA/IM30 family LT988_RS14395 PF00072 Response regulator receiver domain LT988_RS14395 PF00486 Transcriptional regulatory protein, C terminal LT988_RS14400 PF00672 HAMP domain LT988_RS14400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS14400 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS14400 PF00989 PAS fold LT988_RS14410 PF00082 Subtilase family LT988_RS14410 PF04151 Bacterial pre-peptidase C-terminal domain LT988_RS14410 PF05922 Peptidase inhibitor I9 LT988_RS14420 PF13580 SIS domain LT988_RS14450 PF00535 Glycosyl transferase family 2 LT988_RS14450 PF00795 Carbon-nitrogen hydrolase LT988_RS14460 PF00534 Glycosyl transferases group 1 LT988_RS14460 PF13439 Glycosyltransferase Family 4 LT988_RS14520 PF00534 Glycosyl transferases group 1 LT988_RS14520 PF13439 Glycosyltransferase Family 4 LT988_RS14530 PF00535 Glycosyl transferase family 2 LT988_RS14540 PF00535 Glycosyl transferase family 2 LT988_RS14540 PF00534 Glycosyl transferases group 1 LT988_RS14545 PF00535 Glycosyl transferase family 2 LT988_RS14550 PF00005 ABC transporter LT988_RS14550 PF00664 ABC transporter transmembrane region LT988_RS14560 PF00534 Glycosyl transferases group 1 LT988_RS14560 PF13439 Glycosyltransferase Family 4 LT988_RS14600 PF09312 SurA N-terminal domain LT988_RS14600 PF00639 PPIC-type PPIASE domain LT988_RS14620 PF00664 ABC transporter transmembrane region LT988_RS14620 PF00005 ABC transporter LT988_RS14630 PF14765 Polyketide synthase dehydratase LT988_RS14630 PF16197 Ketoacyl-synthetase C-terminal extension LT988_RS14630 PF08240 Alcohol dehydrogenase GroES-like domain LT988_RS14630 PF00698 Acyl transferase domain LT988_RS14630 PF00550 Phosphopantetheine attachment site LT988_RS14630 PF08659 KR domain LT988_RS14630 PF00109 Beta-ketoacyl synthase, N-terminal domain LT988_RS14630 PF02801 Beta-ketoacyl synthase, C-terminal domain LT988_RS14640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LT988_RS14645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LT988_RS14645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LT988_RS14650 PF04794 YdjC-like protein LT988_RS14665 PF02801 Beta-ketoacyl synthase, C-terminal domain LT988_RS14665 PF00698 Acyl transferase domain LT988_RS14665 PF16197 Ketoacyl-synthetase C-terminal extension LT988_RS14665 PF00109 Beta-ketoacyl synthase, N-terminal domain LT988_RS14665 PF08659 KR domain LT988_RS14665 PF00550 Phosphopantetheine attachment site LT988_RS14685 PF00668 Condensation domain LT988_RS14685 PF13193 AMP-binding enzyme C-terminal domain LT988_RS14685 PF00501 AMP-binding enzyme LT988_RS14685 PF00550 Phosphopantetheine attachment site LT988_RS14690 PF00891 O-methyltransferase domain LT988_RS14695 PF01648 4'-phosphopantetheinyl transferase superfamily LT988_RS14715 PF00535 Glycosyl transferase family 2 LT988_RS14735 PF00535 Glycosyl transferase family 2 LT988_RS14740 PF14307 Glycosyltransferase WbsX LT988_RS14740 PF05045 Rhamnan synthesis protein F LT988_RS14760 PF01061 ABC-2 type transporter LT988_RS14765 PF00005 ABC transporter LT988_RS14770 PF03109 ABC1 family LT988_RS14780 PF01209 ubiE/COQ5 methyltransferase family LT988_RS14790 PF10431 C-terminal, D2-small domain, of ClpB protein LT988_RS14790 PF00004 ATPase family associated with various cellular activities (AAA) LT988_RS14790 PF07724 AAA domain (Cdc48 subfamily) LT988_RS14795 PF00227 Proteasome subunit LT988_RS14800 PF13439 Glycosyltransferase Family 4 LT988_RS14810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LT988_RS14815 PF00535 Glycosyl transferase family 2 LT988_RS14845 PF01219 Prokaryotic diacylglycerol kinase LT988_RS14850 PF02347 Glycine cleavage system P-protein LT988_RS14855 PF08534 Redoxin LT988_RS14860 PF02347 Glycine cleavage system P-protein LT988_RS14865 PF01597 Glycine cleavage H-protein LT988_RS14870 PF01571 Aminomethyltransferase folate-binding domain LT988_RS14870 PF08669 Glycine cleavage T-protein C-terminal barrel domain LT988_RS14885 PF13603 Leucyl-tRNA synthetase, Domain 2 LT988_RS14885 PF00133 tRNA synthetases class I (I, L, M and V) LT988_RS14885 PF08264 Anticodon-binding domain of tRNA LT988_RS14900 PF00171 Aldehyde dehydrogenase family LT988_RS14905 PF01467 Cytidylyltransferase-like LT988_RS14925 PF00186 Dihydrofolate reductase LT988_RS14930 PF00149 Calcineurin-like phosphoesterase LT988_RS14935 PF04379 ApaG domain LT988_RS14955 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS14955 PF00589 Phage integrase family LT988_RS14960 PF00589 Phage integrase family LT988_RS14965 PF00589 Phage integrase family LT988_RS14965 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS14980 PF00872 Transposase, Mutator family LT988_RS14985 PF04245 37-kD nucleoid-associated bacterial protein LT988_RS15020 PF00589 Phage integrase family LT988_RS15020 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS15025 PF00589 Phage integrase family LT988_RS15030 PF00589 Phage integrase family LT988_RS15030 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS15100 PF04972 BON domain LT988_RS15110 PF05532 CsbD-like LT988_RS15115 PF00563 EAL domain LT988_RS15115 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS15115 PF08447 PAS fold LT988_RS15115 PF08448 PAS fold LT988_RS15120 PF08448 PAS fold LT988_RS15120 PF03705 CheR methyltransferase, all-alpha domain LT988_RS15120 PF01339 CheB methylesterase LT988_RS15120 PF01739 CheR methyltransferase, SAM binding domain LT988_RS15130 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LT988_RS15135 PF00639 PPIC-type PPIASE domain LT988_RS15135 PF09312 SurA N-terminal domain LT988_RS15140 PF04453 LPS transport system D LT988_RS15145 PF01636 Phosphotransferase enzyme family LT988_RS15150 PF13180 PDZ domain LT988_RS15155 PF01784 NIF3 (NGG1p interacting factor 3) LT988_RS15160 PF00355 Rieske [2Fe-2S] domain LT988_RS15160 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LT988_RS15165 PF00032 Cytochrome b(C-terminal)/b6/petD LT988_RS15165 PF00033 Cytochrome b/b6/petB LT988_RS15170 PF02167 Cytochrome C1 family LT988_RS15175 PF00043 Glutathione S-transferase, C-terminal domain LT988_RS15175 PF02798 Glutathione S-transferase, N-terminal domain LT988_RS15180 PF04386 Stringent starvation protein B LT988_RS15195 PF00893 Small Multidrug Resistance protein LT988_RS15200 PF01594 AI-2E family transporter LT988_RS15235 PF04303 PrpF protein LT988_RS15240 PF04480 Protein of unknown function (DUF559) LT988_RS15245 PF00330 Aconitase family (aconitate hydratase) LT988_RS15245 PF00694 Aconitase C-terminal domain LT988_RS15250 PF00285 Citrate synthase, C-terminal domain LT988_RS15260 PF07729 FCD domain LT988_RS15260 PF00392 Bacterial regulatory proteins, gntR family LT988_RS15265 PF16177 Acetyl-coenzyme A synthetase N-terminus LT988_RS15265 PF00501 AMP-binding enzyme LT988_RS15265 PF13193 AMP-binding enzyme C-terminal domain LT988_RS15270 PF00202 Aminotransferase class-III LT988_RS15275 PF02581 Thiamine monophosphate synthase LT988_RS15280 PF08543 Phosphomethylpyrimidine kinase LT988_RS15280 PF02581 Thiamine monophosphate synthase LT988_RS15285 PF00301 Rubredoxin LT988_RS15295 PF01521 Iron-sulphur cluster biosynthesis LT988_RS15300 PF01118 Semialdehyde dehydrogenase, NAD binding domain LT988_RS15300 PF02774 Semialdehyde dehydrogenase, dimerisation domain LT988_RS15310 PF01521 Iron-sulphur cluster biosynthesis LT988_RS15320 PF01479 S4 domain LT988_RS15320 PF00579 tRNA synthetases class I (W and Y) LT988_RS15350 PF01098 Cell cycle protein LT988_RS15355 PF00905 Penicillin binding protein transpeptidase domain LT988_RS15365 PF01040 UbiA prenyltransferase family LT988_RS15370 PF00378 Enoyl-CoA hydratase/isomerase LT988_RS15375 PF16582 Middle domain of thiamine pyrophosphate LT988_RS15375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LT988_RS15375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LT988_RS15380 PF00425 chorismate binding enzyme LT988_RS15390 PF13460 NAD(P)H-binding LT988_RS15390 PF11066 Protein of unknown function (DUF2867) LT988_RS15405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LT988_RS15405 PF11941 Domain of unknown function (DUF3459) LT988_RS15405 PF00128 Alpha amylase, catalytic domain LT988_RS15410 PF13533 Biotin-lipoyl like LT988_RS15415 PF00005 ABC transporter LT988_RS15425 PF00005 ABC transporter LT988_RS15425 PF12848 ABC transporter LT988_RS15430 PF00313 'Cold-shock' DNA-binding domain LT988_RS15435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LT988_RS15445 PF08241 Methyltransferase domain LT988_RS15460 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus LT988_RS15460 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term LT988_RS15465 PF00561 alpha/beta hydrolase fold LT988_RS15470 PF01078 Magnesium chelatase, subunit ChlI LT988_RS15470 PF17863 AAA lid domain LT988_RS15475 PF17863 AAA lid domain LT988_RS15480 PF12697 Alpha/beta hydrolase family LT988_RS15485 PF01593 Flavin containing amine oxidoreductase LT988_RS15500 PF00501 AMP-binding enzyme LT988_RS15500 PF14535 AMP-binding enzyme C-terminal domain LT988_RS15510 PF00501 AMP-binding enzyme LT988_RS15510 PF14535 AMP-binding enzyme C-terminal domain LT988_RS15535 PF00809 Pterin binding enzyme LT988_RS15545 PF00114 Pilin (bacterial filament) LT988_RS15545 PF07963 Prokaryotic N-terminal methylation motif LT988_RS15555 PF02424 ApbE family LT988_RS15560 PF00873 AcrB/AcrD/AcrF family LT988_RS15570 PF17864 RuvB AAA lid domain LT988_RS15570 PF05491 RuvB C-terminal winged helix domain LT988_RS15570 PF05496 Holliday junction DNA helicase RuvB P-loop domain LT988_RS15575 PF02913 FAD linked oxidases, C-terminal domain LT988_RS15575 PF01565 FAD binding domain LT988_RS15610 PF00795 Carbon-nitrogen hydrolase LT988_RS15615 PF17969 L,D-transpeptidase C-terminal domain LT988_RS15615 PF03734 L,D-transpeptidase catalytic domain LT988_RS15620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LT988_RS15620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LT988_RS15630 PF00230 Major intrinsic protein LT988_RS15640 PF00892 EamA-like transporter family LT988_RS15660 PF03009 Glycerophosphoryl diester phosphodiesterase family LT988_RS15705 PF16868 NMT1-like family LT988_RS15715 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LT988_RS15730 PF05872 Bacterial protein of unknown function (DUF853) LT988_RS15735 PF02931 Neurotransmitter-gated ion-channel ligand binding domain LT988_RS15740 PF13091 PLD-like domain LT988_RS15745 PF00462 Glutaredoxin LT988_RS15780 PF01850 PIN domain LT988_RS15820 PF04055 Radical SAM superfamily LT988_RS15820 PF18693 TRAM domain LT988_RS15820 PF00919 Uncharacterized protein family UPF0004 LT988_RS15845 PF00128 Alpha amylase, catalytic domain LT988_RS15850 PF00534 Glycosyl transferases group 1 LT988_RS15850 PF08323 Starch synthase catalytic domain LT988_RS15855 PF00232 Glycosyl hydrolase family 1 LT988_RS15860 PF00005 ABC transporter LT988_RS15860 PF06472 ABC transporter transmembrane region 2 LT988_RS15870 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LT988_RS15870 PF06165 Glycosyltransferase family 36 LT988_RS15870 PF10091 Putative glucoamylase LT988_RS15875 PF04349 Periplasmic glucan biosynthesis protein, MdoG LT988_RS15885 PF00535 Glycosyl transferase family 2 LT988_RS15900 PF00012 Hsp70 protein LT988_RS15940 PF01625 Peptide methionine sulfoxide reductase LT988_RS15950 PF01702 Queuine tRNA-ribosyltransferase LT988_RS15955 PF02699 Preprotein translocase subunit LT988_RS15960 PF07549 SecD/SecF GG Motif LT988_RS15960 PF13721 SecD export protein N-terminal TM region LT988_RS15960 PF02355 Protein export membrane protein LT988_RS15965 PF07549 SecD/SecF GG Motif LT988_RS15965 PF02355 Protein export membrane protein LT988_RS15985 PF13472 GDSL-like Lipase/Acylhydrolase family LT988_RS15990 PF00005 ABC transporter LT988_RS16030 PF01435 Peptidase family M48 LT988_RS16030 PF13181 Tetratricopeptide repeat LT988_RS16045 PF03279 Bacterial lipid A biosynthesis acyltransferase LT988_RS16055 PF00226 DnaJ domain LT988_RS16055 PF07743 HSCB C-terminal oligomerisation domain LT988_RS16060 PF02082 Transcriptional regulator LT988_RS16065 PF00132 Bacterial transferase hexapeptide (six repeats) LT988_RS16070 PF00588 SpoU rRNA Methylase family LT988_RS16075 PF00459 Inositol monophosphatase family LT988_RS16090 PF00149 Calcineurin-like phosphoesterase LT988_RS16095 PF00232 Glycosyl hydrolase family 1 LT988_RS16100 PF00535 Glycosyl transferase family 2 LT988_RS16110 PF02469 Fasciclin domain LT988_RS16115 PF08448 PAS fold LT988_RS16115 PF08447 PAS fold LT988_RS16115 PF00563 EAL domain LT988_RS16115 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS16120 PF03707 Bacterial signalling protein N terminal repeat LT988_RS16120 PF00563 EAL domain LT988_RS16120 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS16130 PF07689 KaiB domain LT988_RS16135 PF06745 KaiC LT988_RS16150 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS16155 PF00486 Transcriptional regulatory protein, C terminal LT988_RS16155 PF00072 Response regulator receiver domain LT988_RS16160 PF01584 CheW-like domain LT988_RS16160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS16160 PF01627 Hpt domain LT988_RS16160 PF00072 Response regulator receiver domain LT988_RS16165 PF01739 CheR methyltransferase, SAM binding domain LT988_RS16165 PF03705 CheR methyltransferase, all-alpha domain LT988_RS16170 PF00072 Response regulator receiver domain LT988_RS16170 PF01339 CheB methylesterase LT988_RS16175 PF12729 Four helix bundle sensory module for signal transduction LT988_RS16175 PF00672 HAMP domain LT988_RS16175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LT988_RS16180 PF02446 4-alpha-glucanotransferase LT988_RS16185 PF04358 DsrC like protein LT988_RS16190 PF00595 PDZ domain LT988_RS16190 PF13180 PDZ domain LT988_RS16195 PF00011 Hsp20/alpha crystallin family LT988_RS16210 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LT988_RS16210 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LT988_RS16215 PF01568 Molydopterin dinucleotide binding domain LT988_RS16215 PF00384 Molybdopterin oxidoreductase LT988_RS16215 PF12838 4Fe-4S dicluster domain LT988_RS16215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LT988_RS16215 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LT988_RS16220 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LT988_RS16225 PF00374 Nickel-dependent hydrogenase LT988_RS16235 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LT988_RS16235 PF17854 FtsK alpha domain LT988_RS16235 PF09397 Ftsk gamma domain LT988_RS16235 PF01580 FtsK/SpoIIIE family LT988_RS16240 PF03548 Outer membrane lipoprotein carrier protein LolA LT988_RS16245 PF12002 MgsA AAA+ ATPase C terminal LT988_RS16245 PF16193 AAA C-terminal domain LT988_RS16245 PF00004 ATPase family associated with various cellular activities (AAA) LT988_RS16260 PF10576 Iron-sulfur binding domain of endonuclease III LT988_RS16260 PF00633 Helix-hairpin-helix motif LT988_RS16260 PF00730 HhH-GPD superfamily base excision DNA repair protein LT988_RS16265 PF01726 LexA DNA binding domain LT988_RS16265 PF00717 Peptidase S24-like LT988_RS16270 PF01476 LysM domain LT988_RS16275 PF00291 Pyridoxal-phosphate dependent enzyme LT988_RS16290 PF01926 50S ribosome-binding GTPase LT988_RS16290 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LT988_RS16295 PF13360 PQQ-like domain LT988_RS16300 PF09976 Tetratricopeptide repeat-like domain LT988_RS16305 PF13393 Histidyl-tRNA synthetase LT988_RS16305 PF03129 Anticodon binding domain LT988_RS16320 PF04055 Radical SAM superfamily LT988_RS16325 PF00334 Nucleoside diphosphate kinase LT988_RS16345 PF02872 5'-nucleotidase, C-terminal domain LT988_RS16345 PF00149 Calcineurin-like phosphoesterase LT988_RS16350 PF03544 Gram-negative bacterial TonB protein C-terminal LT988_RS16360 PF02472 Biopolymer transport protein ExbD/TolR LT988_RS16365 PF01618 MotA/TolQ/ExbB proton channel family LT988_RS16380 PF07690 Major Facilitator Superfamily LT988_RS16390 PF01515 Phosphate acetyl/butaryl transferase LT988_RS16390 PF03949 Malic enzyme, NAD binding domain LT988_RS16390 PF00390 Malic enzyme, N-terminal domain LT988_RS16405 PF02630 SCO1/SenC LT988_RS16420 PF03466 LysR substrate binding domain LT988_RS16420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT988_RS16425 PF04358 DsrC like protein LT988_RS16450 PF02310 B12 binding domain LT988_RS16450 PF04055 Radical SAM superfamily LT988_RS16455 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LT988_RS16460 PF00361 Proton-conducting membrane transporter LT988_RS16460 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LT988_RS16460 PF13244 Domain of unknown function (DUF4040) LT988_RS16470 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS16470 PF01627 Hpt domain LT988_RS16470 PF00672 HAMP domain LT988_RS16470 PF00072 Response regulator receiver domain LT988_RS16470 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LT988_RS16470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS16475 PF10938 YfdX protein LT988_RS16485 PF00581 Rhodanese-like domain LT988_RS16495 PF02590 Predicted SPOUT methyltransferase LT988_RS16500 PF02545 Maf-like protein LT988_RS16505 PF00575 S1 RNA binding domain LT988_RS16505 PF10150 Ribonuclease E/G family LT988_RS16515 PF00795 Carbon-nitrogen hydrolase LT988_RS16520 PF01523 Putative modulator of DNA gyrase LT988_RS16525 PF01523 Putative modulator of DNA gyrase LT988_RS16555 PF00563 EAL domain LT988_RS16555 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS16555 PF03707 Bacterial signalling protein N terminal repeat LT988_RS16560 PF07690 Major Facilitator Superfamily LT988_RS16570 PF00348 Polyprenyl synthetase LT988_RS16575 PF00829 Ribosomal prokaryotic L21 protein LT988_RS16580 PF01016 Ribosomal L27 protein LT988_RS16585 PF01926 50S ribosome-binding GTPase LT988_RS16585 PF01018 GTP1/OBG LT988_RS16590 PF01472 PUA domain LT988_RS16590 PF00696 Amino acid kinase family LT988_RS16595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LT988_RS16625 PF01121 Dephospho-CoA kinase LT988_RS16630 PF01478 Type IV leader peptidase family LT988_RS16630 PF06750 Bacterial Peptidase A24 N-terminal domain LT988_RS16635 PF00482 Type II secretion system (T2SS), protein F LT988_RS16640 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LT988_RS16640 PF00437 Type II/IV secretion system protein LT988_RS16650 PF16177 Acetyl-coenzyme A synthetase N-terminus LT988_RS16650 PF00501 AMP-binding enzyme LT988_RS16650 PF13193 AMP-binding enzyme C-terminal domain LT988_RS16660 PF00571 CBS domain LT988_RS16665 PF00474 Sodium:solute symporter family LT988_RS16685 PF14821 Threonine synthase N terminus LT988_RS16685 PF00291 Pyridoxal-phosphate dependent enzyme LT988_RS16690 PF08502 LeuA allosteric (dimerisation) domain LT988_RS16690 PF00682 HMGL-like LT988_RS16715 PF00762 Ferrochelatase LT988_RS16725 PF07995 Glucose / Sorbosone dehydrogenase LT988_RS16730 PF00764 Arginosuccinate synthase LT988_RS16755 PF00535 Glycosyl transferase family 2 LT988_RS16770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LT988_RS16770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LT988_RS16795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT988_RS16795 PF03466 LysR substrate binding domain LT988_RS16805 PF13419 Haloacid dehalogenase-like hydrolase LT988_RS16810 PF07726 ATPase family associated with various cellular activities (AAA) LT988_RS16810 PF17863 AAA lid domain LT988_RS16815 PF01882 Protein of unknown function DUF58 LT988_RS16830 PF00092 von Willebrand factor type A domain LT988_RS16830 PF07584 Aerotolerance regulator N-terminal LT988_RS16845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT988_RS16845 PF03466 LysR substrate binding domain LT988_RS16850 PF00872 Transposase, Mutator family LT988_RS16885 PF01985 CRS1 / YhbY (CRM) domain LT988_RS16890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LT988_RS16895 PF02224 Cytidylate kinase LT988_RS16900 PF00575 S1 RNA binding domain LT988_RS16905 PF00216 Bacterial DNA-binding protein LT988_RS16910 PF00155 Aminotransferase class I and II LT988_RS16915 PF00672 HAMP domain LT988_RS16915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS16915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LT988_RS16915 PF00072 Response regulator receiver domain LT988_RS16915 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS16915 PF01627 Hpt domain LT988_RS16920 PF00497 Bacterial extracellular solute-binding proteins, family 3 LT988_RS16920 PF01464 Transglycosylase SLT domain LT988_RS16925 PF11808 Phosphate regulon sensor protein PhoR LT988_RS16925 PF00989 PAS fold LT988_RS16925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS16925 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS16930 PF00072 Response regulator receiver domain LT988_RS16930 PF00486 Transcriptional regulatory protein, C terminal LT988_RS16935 PF00474 Sodium:solute symporter family LT988_RS16940 PF00293 NUDIX domain LT988_RS16950 PF00005 ABC transporter LT988_RS16950 PF12848 ABC transporter LT988_RS16955 PF01297 Zinc-uptake complex component A periplasmic LT988_RS16965 PF01258 Prokaryotic dksA/traR C4-type zinc finger LT988_RS16980 PF05981 CreA protein LT988_RS17010 PF00361 Proton-conducting membrane transporter LT988_RS17015 PF00146 NADH dehydrogenase LT988_RS17025 PF00361 Proton-conducting membrane transporter LT988_RS17030 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LT988_RS17035 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LT988_RS17040 PF17755 UvrA DNA-binding domain LT988_RS17040 PF00005 ABC transporter LT988_RS17040 PF17760 UvrA interaction domain LT988_RS17045 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS17045 PF00072 Response regulator receiver domain LT988_RS17065 PF00883 Cytosol aminopeptidase family, catalytic domain LT988_RS17065 PF02789 Cytosol aminopeptidase family, N-terminal domain LT988_RS17070 PF03739 Lipopolysaccharide export system permease LptF/LptG LT988_RS17080 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS17080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS17080 PF00989 PAS fold LT988_RS17085 PF00072 Response regulator receiver domain LT988_RS17085 PF00196 Bacterial regulatory proteins, luxR family LT988_RS17090 PF07836 DmpG-like communication domain LT988_RS17090 PF00682 HMGL-like LT988_RS17095 PF00285 Citrate synthase, C-terminal domain LT988_RS17105 PF00691 OmpA family LT988_RS17110 PF08328 Adenylosuccinate lyase C-terminal LT988_RS17110 PF00206 Lyase LT988_RS17115 PF00330 Aconitase family (aconitate hydratase) LT988_RS17115 PF00694 Aconitase C-terminal domain LT988_RS17120 PF04356 Protein of unknown function (DUF489) LT988_RS17130 PF00180 Isocitrate/isopropylmalate dehydrogenase LT988_RS17135 PF00313 'Cold-shock' DNA-binding domain LT988_RS17140 PF02617 ATP-dependent Clp protease adaptor protein ClpS LT988_RS17145 PF00004 ATPase family associated with various cellular activities (AAA) LT988_RS17145 PF07724 AAA domain (Cdc48 subfamily) LT988_RS17145 PF17871 AAA lid domain LT988_RS17145 PF02861 Clp amino terminal domain, pathogenicity island component LT988_RS17145 PF10431 C-terminal, D2-small domain, of ClpB protein LT988_RS17150 PF01176 Translation initiation factor 1A / IF-1 LT988_RS17155 PF04377 Arginine-tRNA-protein transferase, C terminus LT988_RS17155 PF04376 Arginine-tRNA-protein transferase, N terminus LT988_RS17160 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LT988_RS17170 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS17175 PF00999 Sodium/hydrogen exchanger family LT988_RS17180 PF00877 NlpC/P60 family LT988_RS17185 PF01355 High potential iron-sulfur protein LT988_RS17195 PF01728 FtsJ-like methyltransferase LT988_RS17200 PF17862 AAA+ lid domain LT988_RS17200 PF06480 FtsH Extracellular LT988_RS17200 PF01434 Peptidase family M41 LT988_RS17200 PF00004 ATPase family associated with various cellular activities (AAA) LT988_RS17205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LT988_RS17205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LT988_RS17205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LT988_RS17205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LT988_RS17210 PF00209 Sodium:neurotransmitter symporter family LT988_RS17215 PF03364 Polyketide cyclase / dehydrase and lipid transport LT988_RS17220 PF03658 RnfH family Ubiquitin LT988_RS17225 PF04355 SmpA / OmlA family LT988_RS17230 PF01475 Ferric uptake regulator family LT988_RS17235 PF02559 CarD-like/TRCF domain LT988_RS17235 PF00270 DEAD/DEAH box helicase LT988_RS17235 PF00271 Helicase conserved C-terminal domain LT988_RS17235 PF03461 TRCF domain LT988_RS17235 PF17757 UvrB interaction domain LT988_RS17240 PF13847 Methyltransferase domain LT988_RS17245 PF01965 DJ-1/PfpI family LT988_RS17245 PF12833 Helix-turn-helix domain LT988_RS17255 PF00486 Transcriptional regulatory protein, C terminal LT988_RS17255 PF18500 CadC C-terminal domain 1 LT988_RS17280 PF00589 Phage integrase family LT988_RS17280 PF14659 Phage integrase, N-terminal SAM-like domain LT988_RS17325 PF01695 IstB-like ATP binding protein LT988_RS17345 PF12256 Insecticide toxin TcdB middle/N-terminal region LT988_RS17345 PF12255 Insecticide toxin TcdB middle/C-terminal region LT988_RS17345 PF03534 Salmonella virulence plasmid 65kDa B protein LT988_RS17360 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain LT988_RS17360 PF18413 Neuraminidase-like domain LT988_RS17380 PF13817 IS66 C-terminal element LT988_RS17380 PF13007 Transposase C of IS166 homeodomain LT988_RS17380 PF13005 zinc-finger binding domain of transposase IS66 LT988_RS17380 PF03050 Transposase IS66 family LT988_RS17395 PF00067 Cytochrome P450 LT988_RS17400 PF11798 IMS family HHH motif LT988_RS17400 PF11799 impB/mucB/samB family C-terminal domain LT988_RS17400 PF00817 impB/mucB/samB family LT988_RS17425 PF08681 Protein of unknown function (DUF1778) LT988_RS17495 PF06122 Conjugative relaxosome accessory transposon protein LT988_RS17520 PF00270 DEAD/DEAH box helicase LT988_RS17520 PF08494 DEAD/H associated LT988_RS17520 PF00271 Helicase conserved C-terminal domain LT988_RS17530 PF07508 Recombinase LT988_RS17530 PF00239 Resolvase, N terminal domain LT988_RS17530 PF13408 Recombinase zinc beta ribbon domain LT988_RS17635 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LT988_RS17695 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS17695 PF00589 Phage integrase family LT988_RS17715 PF01435 Peptidase family M48 LT988_RS17720 PF01292 Prokaryotic cytochrome b561 LT988_RS17725 PF04264 YceI-like domain LT988_RS17735 PF13344 Haloacid dehalogenase-like hydrolase LT988_RS17750 PF00255 Glutathione peroxidase LT988_RS17755 PF00970 Oxidoreductase FAD-binding domain LT988_RS17755 PF00175 Oxidoreductase NAD-binding domain LT988_RS17760 PF04679 ATP dependent DNA ligase C terminal region LT988_RS17760 PF01068 ATP dependent DNA ligase domain LT988_RS17760 PF04675 DNA ligase N terminus LT988_RS17765 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LT988_RS17770 PF01593 Flavin containing amine oxidoreductase LT988_RS17775 PF00034 Cytochrome c LT988_RS17790 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LT988_RS17795 PF00535 Glycosyl transferase family 2 LT988_RS17800 PF04751 Protein of unknown function (DUF615) LT988_RS17805 PF01368 DHH family LT988_RS17805 PF02272 DHHA1 domain LT988_RS17805 PF17768 RecJ OB domain LT988_RS17810 PF01435 Peptidase family M48 LT988_RS17815 PF04011 LemA family LT988_RS17820 PF01618 MotA/TolQ/ExbB proton channel family LT988_RS17825 PF02472 Biopolymer transport protein ExbD/TolR LT988_RS17830 PF00664 ABC transporter transmembrane region LT988_RS17830 PF00005 ABC transporter LT988_RS17835 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LT988_RS17840 PF02348 Cytidylyltransferase LT988_RS17860 PF08173 Membrane bound YbgT-like protein LT988_RS17865 PF02322 Cytochrome bd terminal oxidase subunit II LT988_RS17870 PF01654 Cytochrome bd terminal oxidase subunit I LT988_RS17885 PF13545 Crp-like helix-turn-helix domain LT988_RS17885 PF00027 Cyclic nucleotide-binding domain LT988_RS17890 PF00005 ABC transporter LT988_RS17890 PF16326 ABC transporter C-terminal domain LT988_RS17890 PF12848 ABC transporter LT988_RS17900 PF04204 Homoserine O-succinyltransferase LT988_RS17910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LT988_RS17910 PF00384 Molybdopterin oxidoreductase LT988_RS17910 PF01568 Molydopterin dinucleotide binding domain LT988_RS17915 PF13247 4Fe-4S dicluster domain LT988_RS17915 PF12800 4Fe-4S binding domain LT988_RS17920 PF04976 DMSO reductase anchor subunit (DmsC) LT988_RS17925 PF01544 CorA-like Mg2+ transporter protein LT988_RS17935 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LT988_RS17940 PF00027 Cyclic nucleotide-binding domain LT988_RS17940 PF13545 Crp-like helix-turn-helix domain LT988_RS17945 PF00305 Lipoxygenase LT988_RS17950 PF00211 Adenylate and Guanylate cyclase catalytic domain LT988_RS17950 PF00672 HAMP domain LT988_RS17955 PF17788 HypF Kae1-like domain LT988_RS17955 PF01300 Telomere recombination LT988_RS17955 PF07503 HypF finger LT988_RS17955 PF00708 Acylphosphatase LT988_RS17965 PF00842 Alanine racemase, C-terminal domain LT988_RS17965 PF01168 Alanine racemase, N-terminal domain LT988_RS17975 PF00072 Response regulator receiver domain LT988_RS17980 PF02743 Cache domain LT988_RS17980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS17980 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS17990 PF07689 KaiB domain LT988_RS17995 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS17995 PF00563 EAL domain LT988_RS17995 PF03707 Bacterial signalling protein N terminal repeat LT988_RS18005 PF18339 RapA N-terminal Tudor like domain 1 LT988_RS18005 PF18337 RapA N-terminal Tudor like domain LT988_RS18005 PF12137 RNA polymerase recycling family C-terminal LT988_RS18005 PF00271 Helicase conserved C-terminal domain LT988_RS18005 PF00176 SNF2 family N-terminal domain LT988_RS18010 PF03843 Outer membrane lipoprotein Slp family LT988_RS18020 PF03966 Trm112p-like protein LT988_RS18035 PF00639 PPIC-type PPIASE domain LT988_RS18040 PF04319 NifZ domain LT988_RS18045 PF03206 Nitrogen fixation protein NifW LT988_RS18055 PF00682 HMGL-like LT988_RS18060 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LT988_RS18060 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LT988_RS18060 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LT988_RS18065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LT988_RS18080 PF14480 DNA polymerase III polC-type N-terminus I LT988_RS18080 PF11490 DNA polymerase III polC-type N-terminus II LT988_RS18080 PF07733 Bacterial DNA polymerase III alpha NTPase domain LT988_RS18080 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LT988_RS18080 PF02811 PHP domain LT988_RS18080 PF00929 Exonuclease LT988_RS18080 PF01336 OB-fold nucleic acid binding domain LT988_RS18080 PF14579 Helix-hairpin-helix motif LT988_RS18085 PF04851 Type III restriction enzyme, res subunit LT988_RS18085 PF08463 EcoEI R protein C-terminal LT988_RS18085 PF00271 Helicase conserved C-terminal domain LT988_RS18085 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LT988_RS18095 PF05685 Putative restriction endonuclease LT988_RS18100 PF02384 N-6 DNA Methylase LT988_RS18160 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LT988_RS18160 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LT988_RS18185 PF01471 Putative peptidoglycan binding domain LT988_RS18185 PF13401 AAA domain LT988_RS18195 PF00571 CBS domain LT988_RS18195 PF01769 Divalent cation transporter LT988_RS18195 PF03448 MgtE intracellular N domain LT988_RS18220 PF00690 Cation transporter/ATPase, N-terminus LT988_RS18220 PF00689 Cation transporting ATPase, C-terminus LT988_RS18230 PF00355 Rieske [2Fe-2S] domain LT988_RS18235 PF00591 Glycosyl transferase family, a/b domain LT988_RS18235 PF02885 Glycosyl transferase family, helical bundle domain LT988_RS18250 PF01022 Bacterial regulatory protein, arsR family LT988_RS18255 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LT988_RS18255 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LT988_RS18270 PF01734 Patatin-like phospholipase LT988_RS18275 PF13533 Biotin-lipoyl like LT988_RS18280 PF00873 AcrB/AcrD/AcrF family LT988_RS18300 PF13396 Phospholipase_D-nuclease N-terminal LT988_RS18300 PF13091 PLD-like domain LT988_RS18315 PF00132 Bacterial transferase hexapeptide (six repeats) LT988_RS18325 PF04168 A predicted alpha-helical domain with a conserved ER motif. LT988_RS18325 PF14403 Circularly permuted ATP-grasp type 2 LT988_RS18330 PF03707 Bacterial signalling protein N terminal repeat LT988_RS18330 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS18330 PF00563 EAL domain LT988_RS18335 PF00501 AMP-binding enzyme LT988_RS18335 PF14535 AMP-binding enzyme C-terminal domain LT988_RS18350 PF13654 AAA domain LT988_RS18350 PF05362 Lon protease (S16) C-terminal proteolytic domain LT988_RS18360 PF01875 Memo-like protein LT988_RS18365 PF04055 Radical SAM superfamily LT988_RS18375 PF08669 Glycine cleavage T-protein C-terminal barrel domain LT988_RS18375 PF17806 Sarcosine oxidase A3 domain LT988_RS18375 PF01571 Aminomethyltransferase folate-binding domain LT988_RS18375 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS18435 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LT988_RS18440 PF01348 Type II intron maturase LT988_RS18440 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LT988_RS18465 PF00884 Sulfatase LT988_RS18475 PF16385 Domain of unknown function LT988_RS18475 PF00884 Sulfatase LT988_RS18485 PF00282 Pyridoxal-dependent decarboxylase conserved domain LT988_RS18500 PF08264 Anticodon-binding domain of tRNA LT988_RS18500 PF00133 tRNA synthetases class I (I, L, M and V) LT988_RS18500 PF10458 Valyl tRNA synthetase tRNA binding arm LT988_RS18510 PF00005 ABC transporter LT988_RS18510 PF09383 NIL domain LT988_RS18540 PF01751 Toprim domain LT988_RS18540 PF01131 DNA topoisomerase LT988_RS18545 PF00148 Nitrogenase component 1 type Oxidoreductase LT988_RS18550 PF00148 Nitrogenase component 1 type Oxidoreductase LT988_RS18555 PF02579 Dinitrogenase iron-molybdenum cofactor LT988_RS18565 PF03270 Protein of unknown function, DUF269 LT988_RS18575 PF12838 4Fe-4S dicluster domain LT988_RS18605 PF00664 ABC transporter transmembrane region LT988_RS18605 PF00005 ABC transporter LT988_RS18610 PF00664 ABC transporter transmembrane region LT988_RS18610 PF00005 ABC transporter LT988_RS18615 PF05685 Putative restriction endonuclease LT988_RS18635 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system LT988_RS18640 PF01850 PIN domain LT988_RS18675 PF00589 Phage integrase family LT988_RS18675 PF13495 Phage integrase, N-terminal SAM-like domain LT988_RS18705 PF02386 Cation transport protein LT988_RS18710 PF13439 Glycosyltransferase Family 4 LT988_RS18710 PF00534 Glycosyl transferases group 1 LT988_RS18715 PF01965 DJ-1/PfpI family LT988_RS18720 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LT988_RS18750 PF00005 ABC transporter LT988_RS18760 PF09347 Domain of unknown function (DUF1989) LT988_RS18765 PF02785 Biotin carboxylase C-terminal domain LT988_RS18765 PF00289 Biotin carboxylase, N-terminal domain LT988_RS18765 PF00364 Biotin-requiring enzyme LT988_RS18765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LT988_RS18770 PF01425 Amidase LT988_RS18775 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LT988_RS18775 PF02896 PEP-utilising enzyme, TIM barrel domain LT988_RS18775 PF00391 PEP-utilising enzyme, mobile domain LT988_RS18795 PF00072 Response regulator receiver domain LT988_RS18795 PF01627 Hpt domain LT988_RS18795 PF17149 Periplasmic sensor domain found in signal transduction proteins LT988_RS18795 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS18795 PF00672 HAMP domain LT988_RS18795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS18805 PF18030 RimK PreATP-grasp domain LT988_RS18805 PF08443 RimK-like ATP-grasp domain LT988_RS18810 PF01252 Signal peptidase (SPase) II LT988_RS18815 PF06827 Zinc finger found in FPG and IleRS LT988_RS18815 PF00133 tRNA synthetases class I (I, L, M and V) LT988_RS18815 PF08264 Anticodon-binding domain of tRNA LT988_RS18820 PF01687 Riboflavin kinase LT988_RS18820 PF06574 FAD synthetase LT988_RS18825 PF03023 Lipid II flippase MurJ LT988_RS18830 PF01649 Ribosomal protein S20 LT988_RS18835 PF01790 Prolipoprotein diacylglyceryl transferase LT988_RS18860 PF01975 Survival protein SurE LT988_RS18870 PF01551 Peptidase family M23 LT988_RS18870 PF01476 LysM domain LT988_RS18875 PF04539 Sigma-70 region 3 LT988_RS18875 PF04542 Sigma-70 region 2 LT988_RS18875 PF00140 Sigma-70 factor, region 1.2 LT988_RS18875 PF04545 Sigma-70, region 4 LT988_RS18880 PF00115 Cytochrome C and Quinol oxidase polypeptide I LT988_RS18895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LT988_RS18895 PF00034 Cytochrome c LT988_RS18895 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LT988_RS18905 PF12801 4Fe-4S binding domain LT988_RS18905 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LT988_RS18905 PF13746 4Fe-4S dicluster domain LT988_RS18920 PF00403 Heavy-metal-associated domain LT988_RS18935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LT988_RS18935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LT988_RS18935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LT988_RS18935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LT988_RS18940 PF00183 Hsp90 protein LT988_RS18940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS18945 PF05191 Adenylate kinase, active site lid LT988_RS18950 PF00085 Thioredoxin LT988_RS18960 PF02082 Transcriptional regulator LT988_RS18965 PF05175 Methyltransferase small domain LT988_RS18970 PF06969 HemN C-terminal domain LT988_RS18970 PF04055 Radical SAM superfamily LT988_RS18975 PF13193 AMP-binding enzyme C-terminal domain LT988_RS18975 PF00501 AMP-binding enzyme LT988_RS18980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LT988_RS18980 PF05697 Bacterial trigger factor protein (TF) LT988_RS18980 PF05698 Bacterial trigger factor protein (TF) C-terminus LT988_RS18985 PF00574 Clp protease LT988_RS18990 PF10431 C-terminal, D2-small domain, of ClpB protein LT988_RS18990 PF06689 ClpX C4-type zinc finger LT988_RS18990 PF07724 AAA domain (Cdc48 subfamily) LT988_RS18995 PF00004 ATPase family associated with various cellular activities (AAA) LT988_RS18995 PF02190 ATP-dependent protease La (LON) substrate-binding domain LT988_RS18995 PF05362 Lon protease (S16) C-terminal proteolytic domain LT988_RS19000 PF00216 Bacterial DNA-binding protein LT988_RS19015 PF00639 PPIC-type PPIASE domain LT988_RS19015 PF09312 SurA N-terminal domain LT988_RS19030 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS19035 PF12911 N-terminal TM domain of oligopeptide transport permease C LT988_RS19035 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS19040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LT988_RS19040 PF00005 ABC transporter LT988_RS19050 PF00313 'Cold-shock' DNA-binding domain LT988_RS19055 PF12804 MobA-like NTP transferase domain LT988_RS19065 PF03734 L,D-transpeptidase catalytic domain LT988_RS19075 PF01464 Transglycosylase SLT domain LT988_RS19075 PF01476 LysM domain LT988_RS19085 PF00075 RNase H LT988_RS19090 PF00929 Exonuclease LT988_RS19095 PF00027 Cyclic nucleotide-binding domain LT988_RS19095 PF13545 Crp-like helix-turn-helix domain LT988_RS19105 PF06418 CTP synthase N-terminus LT988_RS19105 PF00117 Glutamine amidotransferase class-I LT988_RS19110 PF00793 DAHP synthetase I family LT988_RS19115 PF00113 Enolase, C-terminal TIM barrel domain LT988_RS19115 PF03952 Enolase, N-terminal domain LT988_RS19120 PF04977 Septum formation initiator LT988_RS19125 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LT988_RS19130 PF02542 YgbB family LT988_RS19135 PF01142 tRNA pseudouridine synthase D (TruD) LT988_RS19140 PF13194 Domain of unknown function (DUF4010) LT988_RS19175 PF16123 Hydroxyacylglutathione hydrolase C-terminus LT988_RS19175 PF00753 Metallo-beta-lactamase superfamily LT988_RS19180 PF00795 Carbon-nitrogen hydrolase LT988_RS19190 PF08245 Mur ligase middle domain LT988_RS19190 PF01225 Mur ligase family, catalytic domain LT988_RS19190 PF02875 Mur ligase family, glutamate ligase domain LT988_RS19195 PF02441 Flavoprotein LT988_RS19205 PF02817 e3 binding domain LT988_RS19205 PF00364 Biotin-requiring enzyme LT988_RS19205 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LT988_RS19210 PF02779 Transketolase, pyrimidine binding domain LT988_RS19210 PF16870 2-oxoglutarate dehydrogenase C-terminal LT988_RS19210 PF00676 Dehydrogenase E1 component LT988_RS19210 PF16078 2-oxoglutarate dehydrogenase N-terminus LT988_RS19225 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LT988_RS19225 PF03900 Porphobilinogen deaminase, C-terminal domain LT988_RS19230 PF02602 Uroporphyrinogen-III synthase HemD LT988_RS19235 PF00072 Response regulator receiver domain LT988_RS19235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LT988_RS19235 PF01627 Hpt domain LT988_RS19235 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS19235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS19235 PF00672 HAMP domain LT988_RS19240 PF00072 Response regulator receiver domain LT988_RS19240 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS19250 PF07715 TonB-dependent Receptor Plug Domain LT988_RS19250 PF00593 TonB dependent receptor LT988_RS19260 PF00970 Oxidoreductase FAD-binding domain LT988_RS19260 PF00111 2Fe-2S iron-sulfur cluster binding domain LT988_RS19260 PF00175 Oxidoreductase NAD-binding domain LT988_RS19280 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LT988_RS19285 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LT988_RS19290 PF01432 Peptidase family M3 LT988_RS19300 PF06470 SMC proteins Flexible Hinge Domain LT988_RS19300 PF02463 RecF/RecN/SMC N terminal domain LT988_RS19305 PF04354 ZipA, C-terminal FtsZ-binding domain LT988_RS19310 PF00533 BRCA1 C Terminus (BRCT) domain LT988_RS19310 PF01653 NAD-dependent DNA ligase adenylation domain LT988_RS19310 PF03120 NAD-dependent DNA ligase OB-fold domain LT988_RS19310 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LT988_RS19310 PF12826 Helix-hairpin-helix motif LT988_RS19320 PF00194 Eukaryotic-type carbonic anhydrase LT988_RS19335 PF03264 NapC/NirT cytochrome c family, N-terminal region LT988_RS19350 PF03795 YCII-related domain LT988_RS19355 PF04279 Intracellular septation protein A LT988_RS19360 PF01235 Sodium:alanine symporter family LT988_RS19365 PF01722 BolA-like protein LT988_RS19375 PF02254 TrkA-N domain LT988_RS19375 PF02080 TrkA-C domain LT988_RS19380 PF02954 Bacterial regulatory protein, Fis family LT988_RS19380 PF00072 Response regulator receiver domain LT988_RS19380 PF00158 Sigma-54 interaction domain LT988_RS19385 PF00672 HAMP domain LT988_RS19385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS19385 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS19385 PF00989 PAS fold LT988_RS19395 PF01189 16S rRNA methyltransferase RsmB/F LT988_RS19395 PF01029 NusB family LT988_RS19400 PF00551 Formyl transferase LT988_RS19400 PF02911 Formyl transferase, C-terminal domain LT988_RS19405 PF01327 Polypeptide deformylase LT988_RS19415 PF02481 DNA recombination-mediator protein A LT988_RS19415 PF17782 DprA winged helix domain LT988_RS19420 PF04361 Protein of unknown function (DUF494) LT988_RS19425 PF01751 Toprim domain LT988_RS19425 PF01131 DNA topoisomerase LT988_RS19425 PF13368 Topoisomerase C-terminal repeat LT988_RS19430 PF06463 Molybdenum Cofactor Synthesis C LT988_RS19430 PF04055 Radical SAM superfamily LT988_RS19435 PF02600 Disulfide bond formation protein DsbB LT988_RS19445 PF03773 Predicted permease LT988_RS19460 PF07730 Histidine kinase LT988_RS19460 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LT988_RS19460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS19460 PF00672 HAMP domain LT988_RS19465 PF00072 Response regulator receiver domain LT988_RS19465 PF00196 Bacterial regulatory proteins, luxR family LT988_RS19470 PF01259 SAICAR synthetase LT988_RS19480 PF01042 Endoribonuclease L-PSP LT988_RS19485 PF13406 Transglycosylase SLT domain LT988_RS19490 PF01894 Uncharacterised protein family UPF0047 LT988_RS19495 PF00271 Helicase conserved C-terminal domain LT988_RS19495 PF00270 DEAD/DEAH box helicase LT988_RS19495 PF17191 RecG wedge domain LT988_RS19500 PF00654 Voltage gated chloride channel LT988_RS19515 PF04358 DsrC like protein LT988_RS19520 PF01370 NAD dependent epimerase/dehydratase family LT988_RS19525 PF16363 GDP-mannose 4,6 dehydratase LT988_RS19545 PF00239 Resolvase, N terminal domain LT988_RS19545 PF13408 Recombinase zinc beta ribbon domain LT988_RS19545 PF07508 Recombinase LT988_RS19570 PF01348 Type II intron maturase LT988_RS19570 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LT988_RS19590 PF01370 NAD dependent epimerase/dehydratase family LT988_RS19630 PF00872 Transposase, Mutator family LT988_RS19640 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LT988_RS19640 PF01348 Type II intron maturase LT988_RS19700 PF13439 Glycosyltransferase Family 4 LT988_RS19700 PF00534 Glycosyl transferases group 1 LT988_RS19705 PF00132 Bacterial transferase hexapeptide (six repeats) LT988_RS19710 PF13579 Glycosyl transferase 4-like domain LT988_RS19710 PF00534 Glycosyl transferases group 1 LT988_RS19725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LT988_RS19750 PF13401 AAA domain LT988_RS19750 PF01471 Putative peptidoglycan binding domain LT988_RS19780 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LT988_RS19800 PF02719 Polysaccharide biosynthesis protein LT988_RS19805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LT988_RS19810 PF00483 Nucleotidyl transferase LT988_RS19815 PF02397 Bacterial sugar transferase LT988_RS19820 PF02719 Polysaccharide biosynthesis protein LT988_RS19890 PF02706 Chain length determinant protein LT988_RS19890 PF13614 AAA domain LT988_RS19890 PF13807 G-rich domain on putative tyrosine kinase LT988_RS19895 PF00684 DnaJ central domain LT988_RS19895 PF01556 DnaJ C terminal domain LT988_RS19895 PF00226 DnaJ domain LT988_RS19925 PF00753 Metallo-beta-lactamase superfamily LT988_RS19925 PF10996 Beta-Casp domain LT988_RS19925 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LT988_RS19930 PF02867 Ribonucleotide reductase, barrel domain LT988_RS19930 PF00317 Ribonucleotide reductase, all-alpha domain LT988_RS19930 PF03477 ATP cone domain LT988_RS19935 PF00571 CBS domain LT988_RS19935 PF00478 IMP dehydrogenase / GMP reductase domain LT988_RS19940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LT988_RS19940 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LT988_RS19950 PF00873 AcrB/AcrD/AcrF family LT988_RS19960 PF13533 Biotin-lipoyl like LT988_RS19970 PF00664 ABC transporter transmembrane region LT988_RS19970 PF00005 ABC transporter LT988_RS19975 PF00672 HAMP domain LT988_RS19975 PF07730 Histidine kinase LT988_RS19975 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LT988_RS19975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS19980 PF00196 Bacterial regulatory proteins, luxR family LT988_RS19980 PF00072 Response regulator receiver domain LT988_RS19985 PF00581 Rhodanese-like domain LT988_RS19995 PF00149 Calcineurin-like phosphoesterase LT988_RS20000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LT988_RS20005 PF01406 tRNA synthetases class I (C) catalytic domain LT988_RS20005 PF09190 DALR domain LT988_RS20025 PF01557 Fumarylacetoacetate (FAA) hydrolase family LT988_RS20040 PF12169 DNA polymerase III subunits gamma and tau domain III LT988_RS20040 PF12170 DNA polymerase III tau subunit V interacting with alpha LT988_RS20040 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LT988_RS20045 PF02575 YbaB/EbfC DNA-binding family LT988_RS20050 PF13662 Toprim domain LT988_RS20050 PF02132 RecR protein LT988_RS20055 PF01230 HIT domain LT988_RS20060 PF05209 Septum formation inhibitor MinC, N-terminal domain LT988_RS20060 PF03775 Septum formation inhibitor MinC, C-terminal domain LT988_RS20065 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LT988_RS20070 PF03776 Septum formation topological specificity factor MinE LT988_RS20080 PF10672 S-adenosylmethionine-dependent methyltransferase LT988_RS20080 PF17785 PUA-like domain LT988_RS20085 PF03190 Protein of unknown function, DUF255 LT988_RS20090 PF13649 Methyltransferase domain LT988_RS20100 PF03061 Thioesterase superfamily LT988_RS20105 PF01618 MotA/TolQ/ExbB proton channel family LT988_RS20110 PF02472 Biopolymer transport protein ExbD/TolR LT988_RS20120 PF07676 WD40-like Beta Propeller Repeat LT988_RS20120 PF04052 TolB amino-terminal domain LT988_RS20125 PF00691 OmpA family LT988_RS20130 PF16331 TolA binding protein trimerisation LT988_RS20130 PF13525 Outer membrane lipoprotein LT988_RS20150 PF00480 ROK family LT988_RS20155 PF13460 NAD(P)H-binding LT988_RS20160 PF01980 tRNA-methyltransferase O LT988_RS20160 PF18389 TrmO C-terminal domain LT988_RS20180 PF13344 Haloacid dehalogenase-like hydrolase LT988_RS20205 PF17854 FtsK alpha domain LT988_RS20205 PF09397 Ftsk gamma domain LT988_RS20205 PF01580 FtsK/SpoIIIE family LT988_RS20205 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LT988_RS20220 PF02661 Fic/DOC family LT988_RS20220 PF13784 Fic/DOC family N-terminal LT988_RS20235 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system LT988_RS20245 PF00873 AcrB/AcrD/AcrF family LT988_RS20250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LT988_RS20260 PF00571 CBS domain LT988_RS20260 PF03448 MgtE intracellular N domain LT988_RS20260 PF01769 Divalent cation transporter LT988_RS20265 PF03781 Sulfatase-modifying factor enzyme 1 LT988_RS20270 PF01040 UbiA prenyltransferase family LT988_RS20280 PF00899 ThiF family LT988_RS20305 PF05175 Methyltransferase small domain LT988_RS20305 PF17827 PrmC N-terminal domain LT988_RS20310 PF03462 PCRF domain LT988_RS20310 PF00472 RF-1 domain LT988_RS20315 PF01488 Shikimate / quinate 5-dehydrogenase LT988_RS20315 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LT988_RS20315 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LT988_RS20325 PF00288 GHMP kinases N terminal domain LT988_RS20325 PF08544 GHMP kinases C terminal LT988_RS20335 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LT988_RS20335 PF14572 Phosphoribosyl synthetase-associated domain LT988_RS20340 PF14693 Ribosomal protein TL5, C-terminal domain LT988_RS20340 PF01386 Ribosomal L25p family LT988_RS20345 PF01195 Peptidyl-tRNA hydrolase LT988_RS20355 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LT988_RS20355 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LT988_RS20355 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LT988_RS20375 PF00009 Elongation factor Tu GTP binding domain LT988_RS20375 PF03144 Elongation factor Tu domain 2 LT988_RS20375 PF03143 Elongation factor Tu C-terminal domain LT988_RS20385 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LT988_RS20390 PF00467 KOW motif LT988_RS20390 PF02357 Transcription termination factor nusG LT988_RS20395 PF00298 Ribosomal protein L11, RNA binding domain LT988_RS20395 PF03946 Ribosomal protein L11, N-terminal domain LT988_RS20400 PF00687 Ribosomal protein L1p/L10e family LT988_RS20405 PF00466 Ribosomal protein L10 LT988_RS20410 PF00542 Ribosomal protein L7/L12 C-terminal domain LT988_RS20410 PF16320 Ribosomal protein L7/L12 dimerisation domain LT988_RS20415 PF04560 RNA polymerase Rpb2, domain 7 LT988_RS20415 PF04563 RNA polymerase beta subunit LT988_RS20415 PF04565 RNA polymerase Rpb2, domain 3 LT988_RS20415 PF10385 RNA polymerase beta subunit external 1 domain LT988_RS20415 PF00562 RNA polymerase Rpb2, domain 6 LT988_RS20415 PF04561 RNA polymerase Rpb2, domain 2 LT988_RS20420 PF05000 RNA polymerase Rpb1, domain 4 LT988_RS20420 PF04997 RNA polymerase Rpb1, domain 1 LT988_RS20420 PF04998 RNA polymerase Rpb1, domain 5 LT988_RS20420 PF00623 RNA polymerase Rpb1, domain 2 LT988_RS20420 PF04983 RNA polymerase Rpb1, domain 3 LT988_RS20425 PF00164 Ribosomal protein S12/S23 LT988_RS20430 PF00177 Ribosomal protein S7p/S5e LT988_RS20435 PF00009 Elongation factor Tu GTP binding domain LT988_RS20435 PF03764 Elongation factor G, domain IV LT988_RS20435 PF00679 Elongation factor G C-terminus LT988_RS20435 PF14492 Elongation Factor G, domain II LT988_RS20435 PF03144 Elongation factor Tu domain 2 LT988_RS20440 PF00009 Elongation factor Tu GTP binding domain LT988_RS20440 PF03143 Elongation factor Tu C-terminal domain LT988_RS20440 PF03144 Elongation factor Tu domain 2 LT988_RS20445 PF00338 Ribosomal protein S10p/S20e LT988_RS20450 PF00297 Ribosomal protein L3 LT988_RS20455 PF00573 Ribosomal protein L4/L1 family LT988_RS20460 PF00276 Ribosomal protein L23 LT988_RS20465 PF00181 Ribosomal Proteins L2, RNA binding domain LT988_RS20465 PF03947 Ribosomal Proteins L2, C-terminal domain LT988_RS20470 PF00203 Ribosomal protein S19 LT988_RS20475 PF00237 Ribosomal protein L22p/L17e LT988_RS20480 PF07650 KH domain LT988_RS20480 PF00189 Ribosomal protein S3, C-terminal domain LT988_RS20485 PF00252 Ribosomal protein L16p/L10e LT988_RS20490 PF00831 Ribosomal L29 protein LT988_RS20495 PF00366 Ribosomal protein S17 LT988_RS20500 PF00238 Ribosomal protein L14p/L23e LT988_RS20505 PF00467 KOW motif LT988_RS20505 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LT988_RS20510 PF00281 Ribosomal protein L5 LT988_RS20510 PF00673 ribosomal L5P family C-terminus LT988_RS20515 PF00253 Ribosomal protein S14p/S29e LT988_RS20520 PF00410 Ribosomal protein S8 LT988_RS20525 PF00347 Ribosomal protein L6 LT988_RS20530 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LT988_RS20535 PF03719 Ribosomal protein S5, C-terminal domain LT988_RS20535 PF00333 Ribosomal protein S5, N-terminal domain LT988_RS20540 PF00327 Ribosomal protein L30p/L7e LT988_RS20545 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LT988_RS20550 PF00344 SecY translocase LT988_RS20555 PF00444 Ribosomal protein L36 LT988_RS20560 PF00416 Ribosomal protein S13/S18 LT988_RS20565 PF00411 Ribosomal protein S11 LT988_RS20570 PF00163 Ribosomal protein S4/S9 N-terminal domain LT988_RS20570 PF01479 S4 domain LT988_RS20575 PF01000 RNA polymerase Rpb3/RpoA insert domain LT988_RS20575 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LT988_RS20575 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LT988_RS20580 PF01196 Ribosomal protein L17 LT988_RS20595 PF00270 DEAD/DEAH box helicase LT988_RS20595 PF00271 Helicase conserved C-terminal domain LT988_RS20600 PF03989 DNA gyrase C-terminal domain, beta-propeller LT988_RS20600 PF00521 DNA gyrase/topoisomerase IV, subunit A LT988_RS20605 PF00266 Aminotransferase class-V LT988_RS20610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LT988_RS20610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LT988_RS20610 PF01842 ACT domain LT988_RS20615 PF01842 ACT domain LT988_RS20615 PF01817 Chorismate mutase type II LT988_RS20615 PF00800 Prephenate dehydratase LT988_RS20620 PF00155 Aminotransferase class I and II LT988_RS20625 PF02153 Prephenate dehydrogenase LT988_RS20630 PF00563 EAL domain LT988_RS20630 PF00990 Diguanylate cyclase, GGDEF domain LT988_RS20630 PF03707 Bacterial signalling protein N terminal repeat LT988_RS20635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LT988_RS20640 PF14489 QueF-like protein LT988_RS20655 PF00196 Bacterial regulatory proteins, luxR family LT988_RS20655 PF00072 Response regulator receiver domain LT988_RS20720 PF13533 Biotin-lipoyl like LT988_RS20745 PF00924 Mechanosensitive ion channel LT988_RS20755 PF01850 PIN domain LT988_RS20770 PF12833 Helix-turn-helix domain LT988_RS20790 PF00300 Histidine phosphatase superfamily (branch 1) LT988_RS20800 PF00924 Mechanosensitive ion channel LT988_RS20810 PF00155 Aminotransferase class I and II LT988_RS20815 PF06826 Predicted Permease Membrane Region LT988_RS20815 PF02080 TrkA-C domain LT988_RS20825 PF00282 Pyridoxal-dependent decarboxylase conserved domain LT988_RS20830 PF00690 Cation transporter/ATPase, N-terminus LT988_RS20830 PF00689 Cation transporting ATPase, C-terminus LT988_RS20835 PF03976 Polyphosphate kinase 2 (PPK2) LT988_RS20850 PF01740 STAS domain LT988_RS20850 PF00916 Sulfate permease family LT988_RS20865 PF02405 Permease MlaE LT988_RS20870 PF00005 ABC transporter LT988_RS20885 PF02254 TrkA-N domain LT988_RS20885 PF00999 Sodium/hydrogen exchanger family LT988_RS20905 PF01979 Amidohydrolase family LT988_RS20910 PF07969 Amidohydrolase family LT988_RS20930 PF00027 Cyclic nucleotide-binding domain LT988_RS20930 PF00005 ABC transporter LT988_RS20960 PF00884 Sulfatase LT988_RS20970 PF11737 Protein of unknown function (DUF3300) LT988_RS20980 PF00999 Sodium/hydrogen exchanger family LT988_RS20995 PF00529 HlyD membrane-fusion protein of T1SS LT988_RS20995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LT988_RS21000 PF00873 AcrB/AcrD/AcrF family LT988_RS21005 PF01726 LexA DNA binding domain LT988_RS21005 PF00717 Peptidase S24-like LT988_RS21010 PF00154 recA bacterial DNA recombination protein LT988_RS21015 PF00817 impB/mucB/samB family LT988_RS21015 PF11799 impB/mucB/samB family C-terminal domain LT988_RS21020 PF02811 PHP domain LT988_RS21020 PF01336 OB-fold nucleic acid binding domain LT988_RS21020 PF07733 Bacterial DNA polymerase III alpha NTPase domain LT988_RS21020 PF14579 Helix-hairpin-helix motif LT988_RS21020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LT988_RS21025 PF00873 AcrB/AcrD/AcrF family LT988_RS21030 PF00529 HlyD membrane-fusion protein of T1SS LT988_RS21030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LT988_RS21135 PF11867 Domain of unknown function (DUF3387) LT988_RS21135 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LT988_RS21135 PF18766 SWI2/SNF2 ATPase LT988_RS21150 PF01420 Type I restriction modification DNA specificity domain LT988_RS21160 PF00194 Eukaryotic-type carbonic anhydrase LT988_RS21165 PF03063 Prismane/CO dehydrogenase family LT988_RS21175 PF10119 Predicted methyltransferase regulatory domain LT988_RS21175 PF13847 Methyltransferase domain LT988_RS21180 PF00905 Penicillin binding protein transpeptidase domain LT988_RS21180 PF00912 Transglycosylase LT988_RS21180 PF06832 Penicillin-Binding Protein C-terminus Family LT988_RS21200 PF00795 Carbon-nitrogen hydrolase LT988_RS21220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LT988_RS21225 PF00005 ABC transporter LT988_RS21245 PF00155 Aminotransferase class I and II LT988_RS21250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LT988_RS21250 PF07685 CobB/CobQ-like glutamine amidotransferase domain LT988_RS21260 PF09529 Integral membrane protein (intg_mem_TP0381) LT988_RS21290 PF01355 High potential iron-sulfur protein LT988_RS21295 PF02276 Photosynthetic reaction centre cytochrome C subunit LT988_RS21300 PF02926 THUMP domain LT988_RS21300 PF01170 Putative RNA methylase family UPF0020 LT988_RS21300 PF10672 S-adenosylmethionine-dependent methyltransferase LT988_RS21305 PF00270 DEAD/DEAH box helicase LT988_RS21305 PF00271 Helicase conserved C-terminal domain LT988_RS21305 PF08482 ATP-dependent helicase C-terminal LT988_RS21305 PF04408 Helicase associated domain (HA2) LT988_RS21325 PF12146 Serine aminopeptidase, S33 LT988_RS21330 PF01636 Phosphotransferase enzyme family LT988_RS21340 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LT988_RS21345 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH LT988_RS21350 PF00330 Aconitase family (aconitate hydratase) LT988_RS21355 PF00694 Aconitase C-terminal domain LT988_RS21360 PF00180 Isocitrate/isopropylmalate dehydrogenase LT988_RS21365 PF02774 Semialdehyde dehydrogenase, dimerisation domain LT988_RS21365 PF01118 Semialdehyde dehydrogenase, NAD binding domain LT988_RS21375 PF01416 tRNA pseudouridine synthase LT988_RS21380 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LT988_RS21385 PF00291 Pyridoxal-phosphate dependent enzyme LT988_RS21390 PF00290 Tryptophan synthase alpha chain LT988_RS21395 PF01039 Carboxyl transferase domain LT988_RS21395 PF17848 Acetyl-coA carboxylase zinc finger domain LT988_RS21400 PF08245 Mur ligase middle domain LT988_RS21400 PF02875 Mur ligase family, glutamate ligase domain LT988_RS21410 PF02674 Colicin V production protein LT988_RS21415 PF00156 Phosphoribosyl transferase domain LT988_RS21420 PF01053 Cys/Met metabolism PLP-dependent enzyme LT988_RS21470 PF01850 PIN domain LT988_RS21475 PF00497 Bacterial extracellular solute-binding proteins, family 3 LT988_RS21490 PF01850 PIN domain LT988_RS21535 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LT988_RS21535 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LT988_RS21550 PF01370 NAD dependent epimerase/dehydratase family LT988_RS21555 PF00912 Transglycosylase LT988_RS21560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LT988_RS21560 PF03466 LysR substrate binding domain LT988_RS21565 PF02525 Flavodoxin-like fold LT988_RS21570 PF02678 Pirin LT988_RS21570 PF05726 Pirin C-terminal cupin domain LT988_RS21575 PF00465 Iron-containing alcohol dehydrogenase LT988_RS21580 PF06421 GTP-binding protein LepA C-terminus LT988_RS21580 PF00679 Elongation factor G C-terminus LT988_RS21580 PF00009 Elongation factor Tu GTP binding domain LT988_RS21585 PF10502 Signal peptidase, peptidase S26 LT988_RS21595 PF00035 Double-stranded RNA binding motif LT988_RS21595 PF14622 Ribonuclease-III-like LT988_RS21600 PF07650 KH domain LT988_RS21600 PF01926 50S ribosome-binding GTPase LT988_RS21605 PF02565 Recombination protein O C terminal LT988_RS21605 PF11967 Recombination protein O N terminal LT988_RS21610 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LT988_RS21615 PF00483 Nucleotidyl transferase LT988_RS21635 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LT988_RS21640 PF02641 Uncharacterized ACR, COG1993 LT988_RS21645 PF02403 Seryl-tRNA synthetase N-terminal domain LT988_RS21645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LT988_RS21650 PF12794 Mechanosensitive ion channel inner membrane domain 1 LT988_RS21650 PF12795 Mechanosensitive ion channel porin domain LT988_RS21650 PF00924 Mechanosensitive ion channel LT988_RS21685 PF00211 Adenylate and Guanylate cyclase catalytic domain LT988_RS21695 PF00230 Major intrinsic protein LT988_RS21705 PF00814 Glycoprotease family LT988_RS21710 PF01266 FAD dependent oxidoreductase LT988_RS21715 PF02401 LytB protein LT988_RS21735 PF00916 Sulfate permease family LT988_RS21735 PF01740 STAS domain LT988_RS21760 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS21760 PF00589 Phage integrase family LT988_RS21770 PF13438 Domain of unknown function (DUF4113) LT988_RS21770 PF00817 impB/mucB/samB family LT988_RS21770 PF11799 impB/mucB/samB family C-terminal domain LT988_RS21775 PF00717 Peptidase S24-like LT988_RS21810 PF13090 Polyphosphate kinase C-terminal domain 2 LT988_RS21810 PF17941 Polyphosphate kinase C-terminal domain 1 LT988_RS21810 PF13089 Polyphosphate kinase N-terminal domain LT988_RS21810 PF02503 Polyphosphate kinase middle domain LT988_RS21815 PF08003 Protein of unknown function (DUF1698) LT988_RS21850 PF03949 Malic enzyme, NAD binding domain LT988_RS21850 PF01515 Phosphate acetyl/butaryl transferase LT988_RS21850 PF00390 Malic enzyme, N-terminal domain LT988_RS21870 PF00535 Glycosyl transferase family 2 LT988_RS21885 PF02687 FtsX-like permease family LT988_RS21885 PF12704 MacB-like periplasmic core domain LT988_RS21885 PF00005 ABC transporter LT988_RS21895 PF03781 Sulfatase-modifying factor enzyme 1 LT988_RS21915 PF01571 Aminomethyltransferase folate-binding domain LT988_RS21920 PF00773 RNB domain LT988_RS21925 PF05951 Bacterial protein of unknown function (DUF882) LT988_RS21930 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LT988_RS21930 PF01464 Transglycosylase SLT domain LT988_RS21940 PF01747 ATP-sulfurylase LT988_RS21940 PF14306 PUA-like domain LT988_RS21955 PF01053 Cys/Met metabolism PLP-dependent enzyme LT988_RS21960 PF01758 Sodium Bile acid symporter family LT988_RS21965 PF03050 Transposase IS66 family LT988_RS22000 PF00174 Oxidoreductase molybdopterin binding domain LT988_RS22005 PF01794 Ferric reductase like transmembrane component LT988_RS22010 PF08241 Methyltransferase domain LT988_RS22020 PF12161 HsdM N-terminal domain LT988_RS22020 PF02384 N-6 DNA Methylase LT988_RS22030 PF12161 HsdM N-terminal domain LT988_RS22030 PF02384 N-6 DNA Methylase LT988_RS22045 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA LT988_RS22085 PF00873 AcrB/AcrD/AcrF family LT988_RS22090 PF13533 Biotin-lipoyl like LT988_RS22125 PF08402 TOBE domain LT988_RS22125 PF00005 ABC transporter LT988_RS22130 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS22135 PF13416 Bacterial extracellular solute-binding protein LT988_RS22140 PF01458 Uncharacterized protein family (UPF0051) LT988_RS22145 PF00005 ABC transporter LT988_RS22150 PF01458 Uncharacterized protein family (UPF0051) LT988_RS22155 PF01883 Iron-sulfur cluster assembly protein LT988_RS22165 PF02673 Bacitracin resistance protein BacA LT988_RS22180 PF09371 Tex-like protein N-terminal domain LT988_RS22180 PF17674 HHH domain LT988_RS22180 PF00575 S1 RNA binding domain LT988_RS22180 PF16921 Tex protein YqgF-like domain LT988_RS22190 PF13533 Biotin-lipoyl like LT988_RS22195 PF00873 AcrB/AcrD/AcrF family LT988_RS22215 PF00403 Heavy-metal-associated domain LT988_RS22230 PF01899 Na+/H+ ion antiporter subunit LT988_RS22235 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) LT988_RS22240 PF03334 Na+/H+ antiporter subunit LT988_RS22250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LT988_RS22250 PF00361 Proton-conducting membrane transporter LT988_RS22250 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter LT988_RS22250 PF13244 Domain of unknown function (DUF4040) LT988_RS22255 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LT988_RS22260 PF00361 Proton-conducting membrane transporter LT988_RS22265 PF00361 Proton-conducting membrane transporter LT988_RS22270 PF00146 NADH dehydrogenase LT988_RS22275 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LT988_RS22280 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LT988_RS22285 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LT988_RS22290 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS22290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LT988_RS22305 PF02687 FtsX-like permease family LT988_RS22305 PF12704 MacB-like periplasmic core domain LT988_RS22310 PF00005 ABC transporter LT988_RS22335 PF00175 Oxidoreductase NAD-binding domain LT988_RS22335 PF00970 Oxidoreductase FAD-binding domain LT988_RS22335 PF00111 2Fe-2S iron-sulfur cluster binding domain LT988_RS22355 PF02464 Competence-damaged protein LT988_RS22365 PF00154 recA bacterial DNA recombination protein LT988_RS22370 PF02631 RecX family LT988_RS22375 PF02272 DHHA1 domain LT988_RS22375 PF01411 tRNA synthetases class II (A) LT988_RS22375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LT988_RS22380 PF00696 Amino acid kinase family LT988_RS22380 PF01842 ACT domain LT988_RS22380 PF13840 ACT domain LT988_RS22385 PF02599 Global regulator protein family LT988_RS22400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LT988_RS22420 PF08534 Redoxin LT988_RS22435 PF04715 Anthranilate synthase component I, N terminal region LT988_RS22435 PF00425 chorismate binding enzyme LT988_RS22470 PF13506 Glycosyl transferase family 21 LT988_RS22480 PF08240 Alcohol dehydrogenase GroES-like domain LT988_RS22480 PF00107 Zinc-binding dehydrogenase LT988_RS22490 PF13439 Glycosyltransferase Family 4 LT988_RS22490 PF00534 Glycosyl transferases group 1 LT988_RS22500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LT988_RS22500 PF01872 RibD C-terminal domain LT988_RS22505 PF00149 Calcineurin-like phosphoesterase LT988_RS22515 PF01722 BolA-like protein LT988_RS22525 PF00107 Zinc-binding dehydrogenase LT988_RS22525 PF08240 Alcohol dehydrogenase GroES-like domain LT988_RS22530 PF05683 Fumarase C-terminus LT988_RS22530 PF05681 Fumarate hydratase (Fumerase) LT988_RS22540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LT988_RS22540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LT988_RS22540 PF03129 Anticodon binding domain LT988_RS22540 PF02824 TGS domain LT988_RS22545 PF05198 Translation initiation factor IF-3, N-terminal domain LT988_RS22545 PF00707 Translation initiation factor IF-3, C-terminal domain LT988_RS22550 PF01632 Ribosomal protein L35 LT988_RS22555 PF00453 Ribosomal protein L20 LT988_RS22560 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LT988_RS22560 PF01409 tRNA synthetases class II core domain (F) LT988_RS22565 PF01588 Putative tRNA binding domain LT988_RS22565 PF03483 B3/4 domain LT988_RS22565 PF03484 tRNA synthetase B5 domain LT988_RS22565 PF03147 Ferredoxin-fold anticodon binding domain LT988_RS22565 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LT988_RS22570 PF00216 Bacterial DNA-binding protein LT988_RS22575 PF13411 MerR HTH family regulatory protein LT988_RS22595 PF00271 Helicase conserved C-terminal domain LT988_RS22595 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LT988_RS22595 PF04851 Type III restriction enzyme, res subunit LT988_RS22595 PF08463 EcoEI R protein C-terminal LT988_RS22605 PF02384 N-6 DNA Methylase LT988_RS22605 PF12161 HsdM N-terminal domain LT988_RS22610 PF01420 Type I restriction modification DNA specificity domain LT988_RS22625 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LT988_RS22625 PF13538 UvrD-like helicase C-terminal domain LT988_RS22625 PF14490 Helix-hairpin-helix containing domain LT988_RS22630 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LT988_RS22630 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LT988_RS22635 PF01471 Putative peptidoglycan binding domain LT988_RS22635 PF10128 Glucose-6-phosphate dehydrogenase subunit LT988_RS22650 PF12146 Serine aminopeptidase, S33 LT988_RS22655 PF05985 Ethanolamine ammonia-lyase light chain (EutC) LT988_RS22660 PF06751 Ethanolamine ammonia lyase large subunit (EutB) LT988_RS22665 PF13520 Amino acid permease LT988_RS22680 PF00308 Bacterial dnaA protein LT988_RS22685 PF03358 NADPH-dependent FMN reductase LT988_RS22695 PF00708 Acylphosphatase LT988_RS22700 PF00149 Calcineurin-like phosphoesterase LT988_RS22705 PF02915 Rubrerythrin LT988_RS22720 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS22720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT988_RS22725 PF00364 Biotin-requiring enzyme LT988_RS22725 PF02817 e3 binding domain LT988_RS22725 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LT988_RS22730 PF17831 Pyruvate dehydrogenase E1 component middle domain LT988_RS22730 PF00456 Transketolase, thiamine diphosphate binding domain LT988_RS22745 PF03186 CobD/Cbib protein LT988_RS22790 PF01895 PhoU domain LT988_RS22795 PF03976 Polyphosphate kinase 2 (PPK2) LT988_RS22805 PF01928 CYTH domain LT988_RS22805 PF05235 CHAD domain LT988_RS22810 PF03448 MgtE intracellular N domain LT988_RS22810 PF01769 Divalent cation transporter LT988_RS22810 PF00571 CBS domain LT988_RS22820 PF02872 5'-nucleotidase, C-terminal domain LT988_RS22820 PF00149 Calcineurin-like phosphoesterase LT988_RS22860 PF00391 PEP-utilising enzyme, mobile domain LT988_RS22860 PF00224 Pyruvate kinase, barrel domain LT988_RS22860 PF02887 Pyruvate kinase, alpha/beta domain LT988_RS22870 PF12849 PBP superfamily domain LT988_RS22875 PF00005 ABC transporter LT988_RS22880 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS22885 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS22890 PF12849 PBP superfamily domain LT988_RS22900 PF00245 Alkaline phosphatase LT988_RS22915 PF07977 FabA-like domain LT988_RS22920 PF03129 Anticodon binding domain LT988_RS22920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LT988_RS22920 PF04073 Aminoacyl-tRNA editing domain LT988_RS22930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LT988_RS22930 PF00205 Thiamine pyrophosphate enzyme, central domain LT988_RS22930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LT988_RS22935 PF10369 Small subunit of acetolactate synthase LT988_RS22940 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LT988_RS22940 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LT988_RS22945 PF02597 ThiS family LT988_RS22950 PF00994 Probable molybdopterin binding domain LT988_RS22950 PF03454 MoeA C-terminal region (domain IV) LT988_RS22950 PF03453 MoeA N-terminal region (domain I and II) LT988_RS22955 PF00994 Probable molybdopterin binding domain LT988_RS22965 PF00478 IMP dehydrogenase / GMP reductase domain LT988_RS22965 PF00571 CBS domain LT988_RS22990 PF01541 GIY-YIG catalytic domain LT988_RS22990 PF02151 UvrB/uvrC motif LT988_RS22990 PF08459 UvrC Helix-hairpin-helix N-terminal LT988_RS22995 PF01066 CDP-alcohol phosphatidyltransferase LT988_RS23015 PF00390 Malic enzyme, N-terminal domain LT988_RS23015 PF03949 Malic enzyme, NAD binding domain LT988_RS23020 PF10415 Fumarase C C-terminus LT988_RS23020 PF00206 Lyase LT988_RS23035 PF01061 ABC-2 type transporter LT988_RS23035 PF00005 ABC transporter LT988_RS23035 PF00498 FHA domain LT988_RS23060 PF03781 Sulfatase-modifying factor enzyme 1 LT988_RS23075 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE LT988_RS23080 PF13677 Membrane MotB of proton-channel complex MotA/MotB LT988_RS23080 PF00691 OmpA family LT988_RS23085 PF06761 Intracellular multiplication and human macrophage-killing LT988_RS23085 PF06744 Type VI secretion protein IcmF C-terminal LT988_RS23085 PF14331 ImcF-related N-terminal domain LT988_RS23105 PF06715 Gp5 C-terminal repeat (3 copies) LT988_RS23105 PF04717 Type VI secretion system, phage-baseplate injector LT988_RS23130 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 LT988_RS23130 PF13665 Domain of unknown function (DUF4150) LT988_RS23150 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LT988_RS23175 PF10431 C-terminal, D2-small domain, of ClpB protein LT988_RS23175 PF00004 ATPase family associated with various cellular activities (AAA) LT988_RS23175 PF07724 AAA domain (Cdc48 subfamily) LT988_RS23175 PF17871 AAA lid domain LT988_RS23185 PF05947 Type VI secretion system, TssF LT988_RS23190 PF04965 Gene 25-like lysozyme LT988_RS23195 PF07024 ImpE protein LT988_RS23200 PF05638 Type VI secretion system effector, Hcp LT988_RS23205 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LT988_RS23210 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 LT988_RS23215 PF06812 ImpA, N-terminal, type VI secretion system LT988_RS23255 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS23260 PF00005 ABC transporter LT988_RS23260 PF00571 CBS domain LT988_RS23265 PF00384 Molybdopterin oxidoreductase LT988_RS23265 PF01568 Molydopterin dinucleotide binding domain LT988_RS23275 PF00561 alpha/beta hydrolase fold LT988_RS23280 PF02321 Outer membrane efflux protein LT988_RS23285 PF01264 Chorismate synthase LT988_RS23290 PF12832 MFS_1 like family LT988_RS23295 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LT988_RS23295 PF00128 Alpha amylase, catalytic domain LT988_RS23325 PF00749 tRNA synthetases class I (E and Q), catalytic domain LT988_RS23325 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LT988_RS23340 PF00107 Zinc-binding dehydrogenase LT988_RS23340 PF08240 Alcohol dehydrogenase GroES-like domain LT988_RS23345 PF00756 Putative esterase LT988_RS23365 PF03458 UPF0126 domain LT988_RS23370 PF00920 Dehydratase family LT988_RS23385 PF05567 Neisseria PilC beta-propeller domain LT988_RS23420 PF00873 AcrB/AcrD/AcrF family LT988_RS23430 PF00905 Penicillin binding protein transpeptidase domain LT988_RS23430 PF17092 Penicillin-binding protein OB-like domain LT988_RS23430 PF00912 Transglycosylase LT988_RS23460 PF00155 Aminotransferase class I and II LT988_RS23465 PF03447 Homoserine dehydrogenase, NAD binding domain LT988_RS23465 PF00742 Homoserine dehydrogenase LT988_RS23465 PF01842 ACT domain LT988_RS23490 PF00005 ABC transporter LT988_RS23500 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LT988_RS23500 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LT988_RS23505 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LT988_RS23505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LT988_RS23510 PF00128 Alpha amylase, catalytic domain LT988_RS23510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LT988_RS23525 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LT988_RS23525 PF01926 50S ribosome-binding GTPase LT988_RS23530 PF00202 Aminotransferase class-III LT988_RS23530 PF04055 Radical SAM superfamily LT988_RS23530 PF06968 Biotin and Thiamin Synthesis associated domain LT988_RS23545 PF03193 RsgA GTPase LT988_RS23555 PF00929 Exonuclease LT988_RS23560 PF08331 Domain of unknown function (DUF1730) LT988_RS23565 PF01256 Carbohydrate kinase LT988_RS23565 PF03853 YjeF-related protein N-terminus LT988_RS23570 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LT988_RS23575 PF01520 N-acetylmuramoyl-L-alanine amidase LT988_RS23575 PF11741 AMIN domain LT988_RS23580 PF08676 MutL C terminal dimerisation domain LT988_RS23580 PF01119 DNA mismatch repair protein, C-terminal domain LT988_RS23590 PF17209 Hfq protein LT988_RS23595 PF16360 GTP-binding GTPase Middle Region LT988_RS23595 PF13167 GTP-binding GTPase N-terminal LT988_RS23595 PF01926 50S ribosome-binding GTPase LT988_RS23600 PF01145 SPFH domain / Band 7 family LT988_RS23600 PF12221 Bacterial membrane protein N terminal LT988_RS23605 PF01145 SPFH domain / Band 7 family LT988_RS23615 PF13393 Histidyl-tRNA synthetase LT988_RS23620 PF00709 Adenylosuccinate synthetase LT988_RS23630 PF02436 Conserved carboxylase domain LT988_RS23630 PF00682 HMGL-like LT988_RS23630 PF00364 Biotin-requiring enzyme LT988_RS23635 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LT988_RS23640 PF02620 Large ribosomal RNA subunit accumulation protein YceD LT988_RS23645 PF01783 Ribosomal L32p protein family LT988_RS23650 PF02504 Fatty acid synthesis protein LT988_RS23655 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LT988_RS23655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LT988_RS23660 PF00698 Acyl transferase domain LT988_RS23670 PF00550 Phosphopantetheine attachment site LT988_RS23675 PF00109 Beta-ketoacyl synthase, N-terminal domain LT988_RS23675 PF02801 Beta-ketoacyl synthase, C-terminal domain LT988_RS23680 PF01063 Amino-transferase class IV LT988_RS23685 PF02618 YceG-like family LT988_RS23690 PF02223 Thymidylate kinase LT988_RS23695 PF09115 DNA polymerase III, delta subunit, C terminal LT988_RS23705 PF01026 TatD related DNase LT988_RS23710 PF03976 Polyphosphate kinase 2 (PPK2) LT988_RS23720 PF01145 SPFH domain / Band 7 family LT988_RS23725 PF02397 Bacterial sugar transferase LT988_RS23740 PF00291 Pyridoxal-phosphate dependent enzyme LT988_RS23750 PF00512 His Kinase A (phospho-acceptor) domain LT988_RS23750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS23750 PF00672 HAMP domain LT988_RS23755 PF00158 Sigma-54 interaction domain LT988_RS23755 PF00072 Response regulator receiver domain LT988_RS23755 PF02954 Bacterial regulatory protein, Fis family LT988_RS23760 PF00801 PKD domain LT988_RS23760 PF05547 Immune inhibitor A peptidase M6 LT988_RS23765 PF13614 AAA domain LT988_RS23820 PF13439 Glycosyltransferase Family 4 LT988_RS23820 PF00534 Glycosyl transferases group 1 LT988_RS23825 PF02350 UDP-N-acetylglucosamine 2-epimerase LT988_RS23840 PF13542 Helix-turn-helix domain of transposase family ISL3 LT988_RS23840 PF01610 Transposase LT988_RS23840 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 LT988_RS23865 PF13808 DDE_Tnp_1-associated LT988_RS23865 PF01609 Transposase DDE domain LT988_RS23890 PF00535 Glycosyl transferase family 2 LT988_RS23915 PF00953 Glycosyl transferase family 4 LT988_RS23925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LT988_RS23925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LT988_RS23925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LT988_RS23965 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH LT988_RS23975 PF05958 tRNA (Uracil-5-)-methyltransferase LT988_RS23975 PF01938 TRAM domain LT988_RS23980 PF01928 CYTH domain LT988_RS23995 PF01479 S4 domain LT988_RS24000 PF00462 Glutaredoxin LT988_RS24005 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LT988_RS24005 PF01433 Peptidase family M1 domain LT988_RS24005 PF11940 Domain of unknown function (DUF3458) Ig-like fold LT988_RS24020 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS24025 PF00528 Binding-protein-dependent transport system inner membrane component LT988_RS24030 PF00005 ABC transporter LT988_RS24030 PF08402 TOBE domain LT988_RS24035 PF13416 Bacterial extracellular solute-binding protein LT988_RS24045 PF02607 B12 binding domain LT988_RS24045 PF13411 MerR HTH family regulatory protein LT988_RS24050 PF00977 Histidine biosynthesis protein LT988_RS24060 PF13187 4Fe-4S dicluster domain LT988_RS24060 PF04060 Putative Fe-S cluster LT988_RS24065 PF10371 Domain of unknown function LT988_RS24065 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LT988_RS24065 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LT988_RS24065 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LT988_RS24065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LT988_RS24070 PF13375 RnfC Barrel sandwich hybrid domain LT988_RS24070 PF10531 SLBB domain LT988_RS24070 PF13237 4Fe-4S dicluster domain LT988_RS24070 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LT988_RS24075 PF03116 NQR2, RnfD, RnfE family LT988_RS24085 PF02508 Rnf-Nqr subunit, membrane protein LT988_RS24090 PF02508 Rnf-Nqr subunit, membrane protein LT988_RS24100 PF00175 Oxidoreductase NAD-binding domain LT988_RS24115 PF00211 Adenylate and Guanylate cyclase catalytic domain LT988_RS24135 PF05114 Protein of unknown function (DUF692) LT988_RS24145 PF04542 Sigma-70 region 2 LT988_RS24145 PF04545 Sigma-70, region 4 LT988_RS24150 PF06532 Negative regulator of sigma F LT988_RS24165 PF00009 Elongation factor Tu GTP binding domain LT988_RS24165 PF16658 Class II release factor RF3, C-terminal domain LT988_RS24170 PF00583 Acetyltransferase (GNAT) family LT988_RS24175 PF01384 Phosphate transporter family LT988_RS24180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LT988_RS24180 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LT988_RS24180 PF10371 Domain of unknown function LT988_RS24180 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LT988_RS24180 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LT988_RS24185 PF01180 Dihydroorotate dehydrogenase LT988_RS24210 PF03480 Bacterial extracellular solute-binding protein, family 7 LT988_RS24220 PF00266 Aminotransferase class-V LT988_RS24225 PF00474 Sodium:solute symporter family LT988_RS24230 PF04341 Protein of unknown function, DUF485 LT988_RS24265 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS24265 PF00589 Phage integrase family LT988_RS24315 PF10502 Signal peptidase, peptidase S26 LT988_RS24325 PF06834 TraU protein LT988_RS24330 PF06986 Type-1V conjugative transfer system mating pair stabilisation LT988_RS24385 PF00484 Carbonic anhydrase LT988_RS24410 PF07728 AAA domain (dynein-related subfamily) LT988_RS24410 PF08406 CbbQ/NirQ/NorQ C-terminal LT988_RS24410 PF12556 Cobaltochelatase CobS subunit N terminal LT988_RS24435 PF04002 RadC-like JAB domain LT988_RS24495 PF00089 Trypsin LT988_RS24525 PF01223 DNA/RNA non-specific endonuclease LT988_RS24560 PF00082 Subtilase family LT988_RS24565 PF00082 Subtilase family LT988_RS24570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LT988_RS24570 PF00183 Hsp90 protein LT988_RS24575 PF00176 SNF2 family N-terminal domain LT988_RS24575 PF00271 Helicase conserved C-terminal domain LT988_RS24575 PF04434 SWIM zinc finger LT988_RS24590 PF09335 SNARE associated Golgi protein LT988_RS24610 PF06122 Conjugative relaxosome accessory transposon protein LT988_RS24675 PF08681 Protein of unknown function (DUF1778) LT988_RS24705 PF00924 Mechanosensitive ion channel LT988_RS24705 PF05552 Conserved TM helix LT988_RS24710 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LT988_RS24710 PF09363 XFP C-terminal domain LT988_RS24710 PF09364 XFP N-terminal domain LT988_RS24755 PF03006 Haemolysin-III related LT988_RS24770 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LT988_RS24770 PF06165 Glycosyltransferase family 36 LT988_RS24770 PF10091 Putative glucoamylase LT988_RS24815 PF01471 Putative peptidoglycan binding domain LT988_RS24815 PF13401 AAA domain LT988_RS24830 PF00483 Nucleotidyl transferase LT988_RS24835 PF04972 BON domain LT988_RS24850 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LT988_RS24870 PF00239 Resolvase, N terminal domain LT988_RS24870 PF13408 Recombinase zinc beta ribbon domain LT988_RS24870 PF07508 Recombinase LT988_RS24910 PF16884 N-terminal domain of oxidoreductase LT988_RS24910 PF00107 Zinc-binding dehydrogenase LT988_RS24940 PF10011 Predicted membrane protein (DUF2254) LT988_RS24945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT988_RS24945 PF00306 ATP synthase alpha/beta chain, C terminal domain LT988_RS24945 PF02874 ATP synthase alpha/beta family, beta-barrel domain LT988_RS24955 PF00430 ATP synthase B/B' CF(0) LT988_RS24955 PF11154 Protein of unknown function (DUF2934) LT988_RS24960 PF00137 ATP synthase subunit C LT988_RS24965 PF00119 ATP synthase A chain LT988_RS24985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LT988_RS24985 PF02874 ATP synthase alpha/beta family, beta-barrel domain LT988_RS25010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT988_RS25010 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS25020 PF08803 Putative mono-oxygenase ydhR LT988_RS25045 PF13460 NAD(P)H-binding LT988_RS25050 PF00565 Staphylococcal nuclease homologue LT988_RS25065 PF00274 Fructose-bisphosphate aldolase class-I LT988_RS25085 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS25085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT988_RS25100 PF00403 Heavy-metal-associated domain LT988_RS25100 PF07992 Pyridine nucleotide-disulphide oxidoreductase LT988_RS25100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LT988_RS25110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LT988_RS25110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LT988_RS25110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LT988_RS25110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LT988_RS25130 PF11867 Domain of unknown function (DUF3387) LT988_RS25130 PF18766 SWI2/SNF2 ATPase LT988_RS25130 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LT988_RS25160 PF17761 DUF1016 N-terminal domain LT988_RS25160 PF06250 YhcG PDDEXK nuclease domain LT988_RS25175 PF00456 Transketolase, thiamine diphosphate binding domain LT988_RS25175 PF02780 Transketolase, C-terminal domain LT988_RS25175 PF02779 Transketolase, pyrimidine binding domain LT988_RS25180 PF00342 Phosphoglucose isomerase LT988_RS25200 PF05547 Immune inhibitor A peptidase M6 LT988_RS25200 PF00801 PKD domain LT988_RS25265 PF08240 Alcohol dehydrogenase GroES-like domain LT988_RS25265 PF00698 Acyl transferase domain LT988_RS25265 PF00109 Beta-ketoacyl synthase, N-terminal domain LT988_RS25265 PF14765 Polyketide synthase dehydratase LT988_RS25265 PF16197 Ketoacyl-synthetase C-terminal extension LT988_RS25265 PF00550 Phosphopantetheine attachment site LT988_RS25265 PF08659 KR domain LT988_RS25265 PF02801 Beta-ketoacyl synthase, C-terminal domain LT988_RS25270 PF05523 WxcM-like, C-terminal LT988_RS25305 PF00589 Phage integrase family LT988_RS25305 PF02899 Phage integrase, N-terminal SAM-like domain LT988_RS25310 PF00589 Phage integrase family LT988_RS25325 PF07963 Prokaryotic N-terminal methylation motif LT988_RS25325 PF00114 Pilin (bacterial filament) LT988_RS25345 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor LT988_RS25345 PF07963 Prokaryotic N-terminal methylation motif LT988_RS25355 PF03330 Lytic transglycolase LT988_RS25355 PF05036 Sporulation related domain