locus-tag class description THIVI_RS00025 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS00025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THIVI_RS00035 PF00155 Aminotransferase class I and II THIVI_RS00040 PF03447 Homoserine dehydrogenase, NAD binding domain THIVI_RS00040 PF00742 Homoserine dehydrogenase THIVI_RS00040 PF01842 ACT domain THIVI_RS00055 PF09371 Tex-like protein N-terminal domain THIVI_RS00055 PF16921 Tex protein YqgF-like domain THIVI_RS00055 PF17674 HHH domain THIVI_RS00055 PF00575 S1 RNA binding domain THIVI_RS00090 PF01783 Ribosomal L32p protein family THIVI_RS00095 PF02504 Fatty acid synthesis protein THIVI_RS00100 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal THIVI_RS00100 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III THIVI_RS00105 PF00698 Acyl transferase domain THIVI_RS00115 PF00550 Phosphopantetheine attachment site THIVI_RS00120 PF00109 Beta-ketoacyl synthase, N-terminal domain THIVI_RS00120 PF02801 Beta-ketoacyl synthase, C-terminal domain THIVI_RS00125 PF01063 Amino-transferase class IV THIVI_RS00130 PF02618 YceG-like family THIVI_RS00135 PF02223 Thymidylate kinase THIVI_RS00140 PF09115 DNA polymerase III, delta subunit, C terminal THIVI_RS00150 PF01026 TatD related DNase THIVI_RS00155 PF04403 Paraquat-inducible protein A THIVI_RS00160 PF02470 MlaD protein THIVI_RS00180 PF00072 Response regulator receiver domain THIVI_RS00180 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS00185 PF16527 Two-component sensor protein CpxA, periplasmic domain THIVI_RS00185 PF00672 HAMP domain THIVI_RS00185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS00185 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS00195 PF00672 HAMP domain THIVI_RS00195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS00205 PF01627 Hpt domain THIVI_RS00205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS00205 PF00672 HAMP domain THIVI_RS00205 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS00205 PF00072 Response regulator receiver domain THIVI_RS00210 PF00563 EAL domain THIVI_RS00210 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS00210 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS00215 PF00873 AcrB/AcrD/AcrF family THIVI_RS00220 PF13533 Biotin-lipoyl like THIVI_RS00230 PF08443 RimK-like ATP-grasp domain THIVI_RS00230 PF02875 Mur ligase family, glutamate ligase domain THIVI_RS00230 PF08245 Mur ligase middle domain THIVI_RS00235 PF02875 Mur ligase family, glutamate ligase domain THIVI_RS00235 PF08245 Mur ligase middle domain THIVI_RS00235 PF08443 RimK-like ATP-grasp domain THIVI_RS00240 PF00005 ABC transporter THIVI_RS00240 PF00664 ABC transporter transmembrane region THIVI_RS00245 PF09587 Bacterial capsule synthesis protein PGA_cap THIVI_RS00260 PF02785 Biotin carboxylase C-terminal domain THIVI_RS00260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THIVI_RS00260 PF00289 Biotin carboxylase, N-terminal domain THIVI_RS00270 PF02436 Conserved carboxylase domain THIVI_RS00270 PF00682 HMGL-like THIVI_RS00270 PF00364 Biotin-requiring enzyme THIVI_RS00275 PF01595 Cyclin M transmembrane N-terminal domain THIVI_RS00275 PF03471 Transporter associated domain THIVI_RS00275 PF00571 CBS domain THIVI_RS00280 PF13520 Amino acid permease THIVI_RS00290 PF13520 Amino acid permease THIVI_RS00295 PF02386 Cation transport protein THIVI_RS00300 PF02080 TrkA-C domain THIVI_RS00300 PF02254 TrkA-N domain THIVI_RS00305 PF02424 ApbE family THIVI_RS00310 PF02416 mttA/Hcf106 family THIVI_RS00320 PF01925 Sulfite exporter TauE/SafE THIVI_RS00345 PF03658 RnfH family Ubiquitin THIVI_RS00350 PF02508 Rnf-Nqr subunit, membrane protein THIVI_RS00355 PF04205 FMN-binding domain THIVI_RS00360 PF03116 NQR2, RnfD, RnfE family THIVI_RS00365 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THIVI_RS00365 PF10531 SLBB domain THIVI_RS00365 PF13375 RnfC Barrel sandwich hybrid domain THIVI_RS00365 PF13237 4Fe-4S dicluster domain THIVI_RS00370 PF04060 Putative Fe-S cluster THIVI_RS00375 PF02508 Rnf-Nqr subunit, membrane protein THIVI_RS00390 PF13492 GAF domain THIVI_RS00390 PF13493 Domain of unknown function (DUF4118) THIVI_RS00390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS00390 PF02702 Osmosensitive K+ channel His kinase sensor domain THIVI_RS00390 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS00410 PF02669 K+-transporting ATPase, c chain THIVI_RS00420 PF03814 Potassium-transporting ATPase A subunit THIVI_RS00430 PF00582 Universal stress protein family THIVI_RS00440 PF02416 mttA/Hcf106 family THIVI_RS00445 PF02416 mttA/Hcf106 family THIVI_RS00450 PF01699 Sodium/calcium exchanger protein THIVI_RS00455 PF01322 Cytochrome C' THIVI_RS00465 PF06508 Queuosine biosynthesis protein QueC THIVI_RS00470 PF01242 6-pyruvoyl tetrahydropterin synthase THIVI_RS00485 PF12627 Probable RNA and SrmB- binding site of polymerase A THIVI_RS00485 PF12626 Polymerase A arginine-rich C-terminus THIVI_RS00485 PF01743 Poly A polymerase head domain THIVI_RS00490 PF02548 Ketopantoate hydroxymethyltransferase THIVI_RS00495 PF02569 Pantoate-beta-alanine ligase THIVI_RS00500 PF02261 Aspartate decarboxylase THIVI_RS00510 PF00534 Glycosyl transferases group 1 THIVI_RS00510 PF08323 Starch synthase catalytic domain THIVI_RS00515 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain THIVI_RS00515 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain THIVI_RS00525 PF00342 Phosphoglucose isomerase THIVI_RS00530 PF00271 Helicase conserved C-terminal domain THIVI_RS00530 PF12419 SNF2 Helicase protein THIVI_RS00530 PF00176 SNF2 family N-terminal domain THIVI_RS00540 PF00005 ABC transporter THIVI_RS00550 PF00005 ABC transporter THIVI_RS00570 PF06228 Haem utilisation ChuX/HutX THIVI_RS00580 PF01475 Ferric uptake regulator family THIVI_RS00585 PF00258 Flavodoxin THIVI_RS00630 PF00534 Glycosyl transferases group 1 THIVI_RS00630 PF13439 Glycosyltransferase Family 4 THIVI_RS00640 PF00535 Glycosyl transferase family 2 THIVI_RS00660 PF00534 Glycosyl transferases group 1 THIVI_RS00660 PF13439 Glycosyltransferase Family 4 THIVI_RS00665 PF13439 Glycosyltransferase Family 4 THIVI_RS00665 PF00534 Glycosyl transferases group 1 THIVI_RS00670 PF00535 Glycosyl transferase family 2 THIVI_RS00740 PF17863 AAA lid domain THIVI_RS00740 PF07726 ATPase family associated with various cellular activities (AAA) THIVI_RS00750 PF13559 Domain of unknown function (DUF4129) THIVI_RS00750 PF11992 Domain of unknown function (DUF3488) THIVI_RS00750 PF01841 Transglutaminase-like superfamily THIVI_RS00755 PF03239 Iron permease FTR1 family THIVI_RS00785 PF04264 YceI-like domain THIVI_RS00790 PF01292 Prokaryotic cytochrome b561 THIVI_RS00805 PF01464 Transglycosylase SLT domain THIVI_RS00805 PF10145 Phage-related minor tail protein THIVI_RS00805 PF01551 Peptidase family M23 THIVI_RS00815 PF08378 Nuclease-related domain THIVI_RS00840 PF00258 Flavodoxin THIVI_RS00845 PF01381 Helix-turn-helix THIVI_RS00880 PF00263 Bacterial type II and III secretion system protein THIVI_RS00880 PF03958 Bacterial type II/III secretion system short domain THIVI_RS00890 PF00482 Type II secretion system (T2SS), protein F THIVI_RS00895 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain THIVI_RS00895 PF00437 Type II/IV secretion system protein THIVI_RS00900 PF00437 Type II/IV secretion system protein THIVI_RS00955 PF00239 Resolvase, N terminal domain THIVI_RS00955 PF02796 Helix-turn-helix domain of resolvase THIVI_RS01015 PF13419 Haloacid dehalogenase-like hydrolase THIVI_RS01020 PF07726 ATPase family associated with various cellular activities (AAA) THIVI_RS01020 PF17863 AAA lid domain THIVI_RS01030 PF01882 Protein of unknown function DUF58 THIVI_RS01040 PF08240 Alcohol dehydrogenase GroES-like domain THIVI_RS01040 PF00107 Zinc-binding dehydrogenase THIVI_RS01045 PF01126 Heme oxygenase THIVI_RS01050 PF04542 Sigma-70 region 2 THIVI_RS01050 PF04545 Sigma-70, region 4 THIVI_RS01060 PF00034 Cytochrome c THIVI_RS01060 PF03150 Di-haem cytochrome c peroxidase THIVI_RS01065 PF02874 ATP synthase alpha/beta family, beta-barrel domain THIVI_RS01065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THIVI_RS01075 PF04055 Radical SAM superfamily THIVI_RS01080 PF08207 Elongation factor P (EF-P) KOW-like domain THIVI_RS01080 PF09285 Elongation factor P, C-terminal THIVI_RS01080 PF01132 Elongation factor P (EF-P) OB domain THIVI_RS01085 PF00152 tRNA synthetases class II (D, K and N) THIVI_RS01100 PF00149 Calcineurin-like phosphoesterase THIVI_RS01105 PF02446 4-alpha-glucanotransferase THIVI_RS01120 PF08298 PrkA AAA domain THIVI_RS01120 PF06798 PrkA serine protein kinase C-terminal domain THIVI_RS01125 PF04285 Protein of unknown function (DUF444) THIVI_RS01130 PF04293 SpoVR like protein THIVI_RS01140 PF03734 L,D-transpeptidase catalytic domain THIVI_RS01145 PF01979 Amidohydrolase family THIVI_RS01150 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain THIVI_RS01150 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain THIVI_RS01160 PF01121 Dephospho-CoA kinase THIVI_RS01165 PF01478 Type IV leader peptidase family THIVI_RS01165 PF06750 Bacterial Peptidase A24 N-terminal domain THIVI_RS01170 PF00482 Type II secretion system (T2SS), protein F THIVI_RS01175 PF00437 Type II/IV secretion system protein THIVI_RS01175 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain THIVI_RS01185 PF13193 AMP-binding enzyme C-terminal domain THIVI_RS01185 PF00501 AMP-binding enzyme THIVI_RS01185 PF16177 Acetyl-coenzyme A synthetase N-terminus THIVI_RS01195 PF00571 CBS domain THIVI_RS01200 PF00474 Sodium:solute symporter family THIVI_RS01210 PF00291 Pyridoxal-phosphate dependent enzyme THIVI_RS01210 PF14821 Threonine synthase N terminus THIVI_RS01215 PF00682 HMGL-like THIVI_RS01215 PF08502 LeuA allosteric (dimerisation) domain THIVI_RS01245 PF02322 Cytochrome bd terminal oxidase subunit II THIVI_RS01250 PF01654 Cytochrome bd terminal oxidase subunit I THIVI_RS01270 PF16326 ABC transporter C-terminal domain THIVI_RS01270 PF00005 ABC transporter THIVI_RS01270 PF12848 ABC transporter THIVI_RS01275 PF00367 phosphotransferase system, EIIB THIVI_RS01275 PF02378 Phosphotransferase system, EIIC THIVI_RS01280 PF02896 PEP-utilising enzyme, TIM barrel domain THIVI_RS01280 PF00391 PEP-utilising enzyme, mobile domain THIVI_RS01280 PF05524 PEP-utilising enzyme, N-terminal THIVI_RS01280 PF00381 PTS HPr component phosphorylation site THIVI_RS01280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 THIVI_RS01290 PF11700 Vacuole effluxer Atg22 like THIVI_RS01295 PF07152 YaeQ protein THIVI_RS01305 PF00232 Glycosyl hydrolase family 1 THIVI_RS01310 PF00535 Glycosyl transferase family 2 THIVI_RS01325 PF00476 DNA polymerase family A THIVI_RS01325 PF01612 3'-5' exonuclease THIVI_RS01325 PF01367 5'-3' exonuclease, C-terminal SAM fold THIVI_RS01325 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain THIVI_RS01330 PF00556 Antenna complex alpha/beta subunit THIVI_RS01340 PF00556 Antenna complex alpha/beta subunit THIVI_RS01345 PF00556 Antenna complex alpha/beta subunit THIVI_RS01355 PF00556 Antenna complex alpha/beta subunit THIVI_RS01365 PF00556 Antenna complex alpha/beta subunit THIVI_RS01370 PF06745 KaiC THIVI_RS01375 PF07689 KaiB domain THIVI_RS01380 PF07689 KaiB domain THIVI_RS01390 PF00196 Bacterial regulatory proteins, luxR family THIVI_RS01390 PF00072 Response regulator receiver domain THIVI_RS01400 PF18337 RapA N-terminal Tudor like domain THIVI_RS01400 PF18339 RapA N-terminal Tudor like domain 1 THIVI_RS01400 PF00176 SNF2 family N-terminal domain THIVI_RS01400 PF12137 RNA polymerase recycling family C-terminal THIVI_RS01400 PF00271 Helicase conserved C-terminal domain THIVI_RS01405 PF00293 NUDIX domain THIVI_RS01410 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS01410 PF00072 Response regulator receiver domain THIVI_RS01415 PF00989 PAS fold THIVI_RS01415 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS01415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS01415 PF11808 Phosphate regulon sensor protein PhoR THIVI_RS01430 PF01384 Phosphate transporter family THIVI_RS01435 PF01865 Protein of unknown function DUF47 THIVI_RS01440 PF00216 Bacterial DNA-binding protein THIVI_RS01445 PF00575 S1 RNA binding domain THIVI_RS01450 PF02224 Cytidylate kinase THIVI_RS01455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THIVI_RS01475 PF02743 Cache domain THIVI_RS01475 PF00672 HAMP domain THIVI_RS01475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS01480 PF00072 Response regulator receiver domain THIVI_RS01490 PF01627 Hpt domain THIVI_RS01490 PF07194 P2 response regulator binding domain THIVI_RS01490 PF01584 CheW-like domain THIVI_RS01490 PF02895 Signal transducing histidine kinase, homodimeric domain THIVI_RS01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS01495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS01495 PF00672 HAMP domain THIVI_RS01500 PF01584 CheW-like domain THIVI_RS01505 PF00893 Small Multidrug Resistance protein THIVI_RS01510 PF00072 Response regulator receiver domain THIVI_RS01520 PF08447 PAS fold THIVI_RS01520 PF05231 MASE1 THIVI_RS01520 PF00563 EAL domain THIVI_RS01520 PF13426 PAS domain THIVI_RS01520 PF08448 PAS fold THIVI_RS01520 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS01525 PF01584 CheW-like domain THIVI_RS01525 PF09078 CheY binding THIVI_RS01525 PF02895 Signal transducing histidine kinase, homodimeric domain THIVI_RS01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS01525 PF01627 Hpt domain THIVI_RS01530 PF03705 CheR methyltransferase, all-alpha domain THIVI_RS01530 PF01739 CheR methyltransferase, SAM binding domain THIVI_RS01535 PF03975 CheD chemotactic sensory transduction THIVI_RS01540 PF01339 CheB methylesterase THIVI_RS01540 PF00072 Response regulator receiver domain THIVI_RS01545 PF13426 PAS domain THIVI_RS01545 PF08447 PAS fold THIVI_RS01545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS01550 PF01584 CheW-like domain THIVI_RS01555 PF00072 Response regulator receiver domain THIVI_RS01555 PF01339 CheB methylesterase THIVI_RS01565 PF01739 CheR methyltransferase, SAM binding domain THIVI_RS01565 PF03705 CheR methyltransferase, all-alpha domain THIVI_RS01570 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS01570 PF00072 Response regulator receiver domain THIVI_RS01575 PF02895 Signal transducing histidine kinase, homodimeric domain THIVI_RS01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS01575 PF01627 Hpt domain THIVI_RS01575 PF00072 Response regulator receiver domain THIVI_RS01575 PF01584 CheW-like domain THIVI_RS01585 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS01585 PF00072 Response regulator receiver domain THIVI_RS01590 PF12729 Four helix bundle sensory module for signal transduction THIVI_RS01590 PF00672 HAMP domain THIVI_RS01590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS01595 PF08678 Rsbr N terminal THIVI_RS01595 PF01740 STAS domain THIVI_RS01600 PF01740 STAS domain THIVI_RS01605 PF13581 Histidine kinase-like ATPase domain THIVI_RS01610 PF13581 Histidine kinase-like ATPase domain THIVI_RS01620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS01620 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS01625 PF00072 Response regulator receiver domain THIVI_RS01625 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS01630 PF13614 AAA domain THIVI_RS01635 PF12729 Four helix bundle sensory module for signal transduction THIVI_RS01635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS01635 PF00672 HAMP domain THIVI_RS01690 PF13677 Membrane MotB of proton-channel complex MotA/MotB THIVI_RS01690 PF00691 OmpA family THIVI_RS01695 PF01618 MotA/TolQ/ExbB proton channel family THIVI_RS01715 PF06490 Flagellar regulatory protein FleQ THIVI_RS01715 PF02954 Bacterial regulatory protein, Fis family THIVI_RS01715 PF00158 Sigma-54 interaction domain THIVI_RS01720 PF02049 Flagellar hook-basal body complex protein FliE THIVI_RS01725 PF08345 Flagellar M-ring protein C-terminal THIVI_RS01725 PF01514 Secretory protein of YscJ/FliF family THIVI_RS01730 PF14841 FliG middle domain THIVI_RS01730 PF14842 FliG N-terminal domain THIVI_RS01730 PF01706 FliG C-terminal domain THIVI_RS01740 PF18269 T3SS EscN ATPase C-terminal domain THIVI_RS01740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THIVI_RS01760 PF02154 Flagellar motor switch protein FliM THIVI_RS01760 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THIVI_RS01765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THIVI_RS01770 PF04347 Flagellar biosynthesis protein, FliO THIVI_RS01775 PF00813 FliP family THIVI_RS01780 PF01313 Bacterial export proteins, family 3 THIVI_RS01785 PF01311 Bacterial export proteins, family 1 THIVI_RS01790 PF01312 FlhB HrpN YscU SpaS Family THIVI_RS01795 PF00771 FHIPEP family THIVI_RS01800 PF00448 SRP54-type protein, GTPase domain THIVI_RS01805 PF10609 NUBPL iron-transfer P-loop NTPase THIVI_RS01810 PF04539 Sigma-70 region 3 THIVI_RS01810 PF04545 Sigma-70, region 4 THIVI_RS01810 PF04542 Sigma-70 region 2 THIVI_RS01815 PF00072 Response regulator receiver domain THIVI_RS01820 PF04344 Chemotaxis phosphatase, CheZ THIVI_RS01830 PF04344 Chemotaxis phosphatase, CheZ THIVI_RS01835 PF00072 Response regulator receiver domain THIVI_RS01835 PF01584 CheW-like domain THIVI_RS01835 PF02895 Signal transducing histidine kinase, homodimeric domain THIVI_RS01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS01835 PF01627 Hpt domain THIVI_RS01840 PF00072 Response regulator receiver domain THIVI_RS01840 PF01339 CheB methylesterase THIVI_RS01845 PF01618 MotA/TolQ/ExbB proton channel family THIVI_RS01850 PF00691 OmpA family THIVI_RS01850 PF13677 Membrane MotB of proton-channel complex MotA/MotB THIVI_RS01855 PF01584 CheW-like domain THIVI_RS01870 PF01312 FlhB HrpN YscU SpaS Family THIVI_RS01905 PF00072 Response regulator receiver domain THIVI_RS01905 PF01584 CheW-like domain THIVI_RS01910 PF01739 CheR methyltransferase, SAM binding domain THIVI_RS01910 PF03705 CheR methyltransferase, all-alpha domain THIVI_RS01915 PF00460 Flagella basal body rod protein THIVI_RS01920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THIVI_RS01920 PF00460 Flagella basal body rod protein THIVI_RS01925 PF13861 FlgD Tudor-like domain THIVI_RS01925 PF03963 Flagellar hook capping protein - N-terminal region THIVI_RS01925 PF13860 FlgD Ig-like domain THIVI_RS01930 PF07559 Flagellar basal body protein FlaE THIVI_RS01930 PF00460 Flagella basal body rod protein THIVI_RS01930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THIVI_RS01935 PF00460 Flagella basal body rod protein THIVI_RS01935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THIVI_RS01940 PF00460 Flagella basal body rod protein THIVI_RS01940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THIVI_RS01945 PF02107 Flagellar L-ring protein THIVI_RS01950 PF02119 Flagellar P-ring protein THIVI_RS01955 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase THIVI_RS01955 PF10135 Rod binding protein THIVI_RS01965 PF00669 Bacterial flagellin N-terminal helical region THIVI_RS01985 PF17209 Hfq protein THIVI_RS01990 PF01926 50S ribosome-binding GTPase THIVI_RS01990 PF13167 GTP-binding GTPase N-terminal THIVI_RS01990 PF16360 GTP-binding GTPase Middle Region THIVI_RS01995 PF01145 SPFH domain / Band 7 family THIVI_RS01995 PF12221 Bacterial membrane protein N terminal THIVI_RS02000 PF01145 SPFH domain / Band 7 family THIVI_RS02015 PF13393 Histidyl-tRNA synthetase THIVI_RS02020 PF00709 Adenylosuccinate synthetase THIVI_RS02030 PF02743 Cache domain THIVI_RS02030 PF00672 HAMP domain THIVI_RS02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS02040 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal THIVI_RS02040 PF01926 50S ribosome-binding GTPase THIVI_RS02050 PF13808 DDE_Tnp_1-associated THIVI_RS02050 PF01609 Transposase DDE domain THIVI_RS02060 PF01348 Type II intron maturase THIVI_RS02060 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) THIVI_RS02070 PF01381 Helix-turn-helix THIVI_RS02090 PF05860 haemagglutination activity domain THIVI_RS02090 PF02661 Fic/DOC family THIVI_RS02090 PF13018 Extended Signal Peptide of Type V secretion system THIVI_RS02090 PF03543 Yersinia/Haemophilus virulence surface antigen THIVI_RS02090 PF13332 Hemagglutinin repeat THIVI_RS02095 PF00561 alpha/beta hydrolase fold THIVI_RS02100 PF01139 tRNA-splicing ligase RtcB THIVI_RS02105 PF00472 RF-1 domain THIVI_RS02110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS02110 PF08447 PAS fold THIVI_RS02110 PF08447 PAS fold THIVI_RS02110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS02120 PF12631 MnmE helical domain THIVI_RS02120 PF10396 GTP-binding protein TrmE N-terminus THIVI_RS02120 PF01926 50S ribosome-binding GTPase THIVI_RS02125 PF01926 50S ribosome-binding GTPase THIVI_RS02125 PF13167 GTP-binding GTPase N-terminal THIVI_RS02125 PF16360 GTP-binding GTPase Middle Region THIVI_RS02130 PF00768 D-alanyl-D-alanine carboxypeptidase THIVI_RS02135 PF03006 Haemolysin-III related THIVI_RS02140 PF04102 SlyX THIVI_RS02155 PF01475 Ferric uptake regulator family THIVI_RS02200 PF00270 DEAD/DEAH box helicase THIVI_RS02200 PF18019 HD domain THIVI_RS02200 PF00271 Helicase conserved C-terminal domain THIVI_RS02205 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) THIVI_RS02215 PF09344 CT1975-like protein THIVI_RS02220 PF09704 CRISPR-associated protein (Cas_Cas5) THIVI_RS02225 PF08798 CRISPR associated protein THIVI_RS02245 PF01867 CRISPR associated protein Cas1 THIVI_RS02250 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) THIVI_RS02255 PF00149 Calcineurin-like phosphoesterase THIVI_RS02260 PF04379 ApaG domain THIVI_RS02270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain THIVI_RS02270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THIVI_RS02280 PF03023 Lipid II flippase MurJ THIVI_RS02295 PF01649 Ribosomal protein S20 THIVI_RS02300 PF00005 ABC transporter THIVI_RS02300 PF00571 CBS domain THIVI_RS02305 PF00528 Binding-protein-dependent transport system inner membrane component THIVI_RS02315 PF01790 Prolipoprotein diacylglyceryl transferase THIVI_RS02325 PF01975 Survival protein SurE THIVI_RS02335 PF01476 LysM domain THIVI_RS02335 PF01551 Peptidase family M23 THIVI_RS02340 PF04545 Sigma-70, region 4 THIVI_RS02340 PF04542 Sigma-70 region 2 THIVI_RS02340 PF00140 Sigma-70 factor, region 1.2 THIVI_RS02340 PF04539 Sigma-70 region 3 THIVI_RS02345 PF00266 Aminotransferase class-V THIVI_RS02350 PF04324 BFD-like [2Fe-2S] binding domain THIVI_RS02350 PF01106 NifU-like domain THIVI_RS02350 PF01592 NifU-like N terminal domain THIVI_RS02360 PF00106 short chain dehydrogenase THIVI_RS02370 PF05736 OprF membrane domain THIVI_RS02370 PF00691 OmpA family THIVI_RS02375 PF00871 Acetokinase family THIVI_RS02380 PF07085 DRTGG domain THIVI_RS02380 PF01515 Phosphate acetyl/butaryl transferase THIVI_RS02390 PF00361 Proton-conducting membrane transporter THIVI_RS02390 PF13244 Domain of unknown function (DUF4040) THIVI_RS02390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THIVI_RS02390 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter THIVI_RS02395 PF00146 NADH dehydrogenase THIVI_RS02400 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THIVI_RS02405 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THIVI_RS02410 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THIVI_RS02410 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THIVI_RS02410 PF00374 Nickel-dependent hydrogenase THIVI_RS02420 PF00149 Calcineurin-like phosphoesterase THIVI_RS02425 PF02915 Rubrerythrin THIVI_RS02435 PF02542 YgbB family THIVI_RS02440 PF01142 tRNA pseudouridine synthase D (TruD) THIVI_RS02475 PF17785 PUA-like domain THIVI_RS02475 PF10672 S-adenosylmethionine-dependent methyltransferase THIVI_RS02485 PF00005 ABC transporter THIVI_RS02485 PF17755 UvrA DNA-binding domain THIVI_RS02485 PF17760 UvrA interaction domain THIVI_RS02500 PF08032 RNA 2'-O ribose methyltransferase substrate binding THIVI_RS02500 PF00588 SpoU rRNA Methylase family THIVI_RS02505 PF08206 Ribonuclease B OB domain THIVI_RS02505 PF00773 RNB domain THIVI_RS02505 PF00575 S1 RNA binding domain THIVI_RS02505 PF08461 Ribonuclease R winged-helix domain THIVI_RS02505 PF17876 Cold shock domain THIVI_RS02525 PF07836 DmpG-like communication domain THIVI_RS02525 PF00682 HMGL-like THIVI_RS02530 PF00285 Citrate synthase, C-terminal domain THIVI_RS02555 PF01370 NAD dependent epimerase/dehydratase family THIVI_RS02560 PF00005 ABC transporter THIVI_RS02560 PF00664 ABC transporter transmembrane region THIVI_RS02565 PF01895 PhoU domain THIVI_RS02570 PF00563 EAL domain THIVI_RS02570 PF00989 PAS fold THIVI_RS02570 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS02570 PF01590 GAF domain THIVI_RS02575 PF00672 HAMP domain THIVI_RS02575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS02575 PF17200 Single Cache domain 2 THIVI_RS02595 PF18073 Rubredoxin metal binding domain THIVI_RS02600 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family THIVI_RS02605 PF00483 Nucleotidyl transferase THIVI_RS02615 PF12146 Serine aminopeptidase, S33 THIVI_RS02620 PF04358 DsrC like protein THIVI_RS02645 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THIVI_RS02645 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THIVI_RS02650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THIVI_RS02650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THIVI_RS02655 PF02635 DsrE/DsrF-like family THIVI_RS02660 PF02635 DsrE/DsrF-like family THIVI_RS02670 PF04358 DsrC like protein THIVI_RS02685 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THIVI_RS02685 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS02695 PF13247 4Fe-4S dicluster domain THIVI_RS02705 PF07685 CobB/CobQ-like glutamine amidotransferase domain THIVI_RS02705 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THIVI_RS02715 PF00291 Pyridoxal-phosphate dependent enzyme THIVI_RS02720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS02720 PF00672 HAMP domain THIVI_RS02720 PF02743 Cache domain THIVI_RS02725 PF00072 Response regulator receiver domain THIVI_RS02725 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS02730 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS02730 PF00563 EAL domain THIVI_RS02730 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS02735 PF00072 Response regulator receiver domain THIVI_RS02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS02735 PF13188 PAS domain THIVI_RS02735 PF08448 PAS fold THIVI_RS02735 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS02740 PF00672 HAMP domain THIVI_RS02740 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS02740 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS02740 PF00072 Response regulator receiver domain THIVI_RS02740 PF01627 Hpt domain THIVI_RS02750 PF04371 Porphyromonas-type peptidyl-arginine deiminase THIVI_RS02765 PF01027 Inhibitor of apoptosis-promoting Bax1 THIVI_RS02805 PF12556 Cobaltochelatase CobS subunit N terminal THIVI_RS02805 PF08406 CbbQ/NirQ/NorQ C-terminal THIVI_RS02805 PF07728 AAA domain (dynein-related subfamily) THIVI_RS02850 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS02850 PF17862 AAA+ lid domain THIVI_RS02850 PF01434 Peptidase family M41 THIVI_RS02860 PF02384 N-6 DNA Methylase THIVI_RS02875 PF01420 Type I restriction modification DNA specificity domain THIVI_RS02880 PF18766 SWI2/SNF2 ATPase THIVI_RS02880 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) THIVI_RS02880 PF11867 Domain of unknown function (DUF3387) THIVI_RS02890 PF01609 Transposase DDE domain THIVI_RS02890 PF13808 DDE_Tnp_1-associated THIVI_RS02895 PF14659 Phage integrase, N-terminal SAM-like domain THIVI_RS02895 PF13356 Arm DNA-binding domain THIVI_RS02895 PF00589 Phage integrase family THIVI_RS02905 PF00850 Histone deacetylase domain THIVI_RS02910 PF00583 Acetyltransferase (GNAT) family THIVI_RS02910 PF13380 CoA binding domain THIVI_RS02910 PF13607 Succinyl-CoA ligase like flavodoxin domain THIVI_RS02920 PF00890 FAD binding domain THIVI_RS02920 PF02910 Fumarate reductase flavoprotein C-term THIVI_RS02925 PF04542 Sigma-70 region 2 THIVI_RS02925 PF08281 Sigma-70, region 4 THIVI_RS02935 PF03888 MucB/RseB N-terminal domain THIVI_RS02935 PF17188 MucB/RseB C-terminal domain THIVI_RS02945 PF13180 PDZ domain THIVI_RS02945 PF17820 PDZ domain THIVI_RS02950 PF06421 GTP-binding protein LepA C-terminus THIVI_RS02950 PF00009 Elongation factor Tu GTP binding domain THIVI_RS02950 PF00679 Elongation factor G C-terminus THIVI_RS02955 PF10502 Signal peptidase, peptidase S26 THIVI_RS02965 PF00035 Double-stranded RNA binding motif THIVI_RS02965 PF14622 Ribonuclease-III-like THIVI_RS02970 PF07650 KH domain THIVI_RS02970 PF01926 50S ribosome-binding GTPase THIVI_RS02975 PF02565 Recombination protein O C terminal THIVI_RS02975 PF11967 Recombination protein O N terminal THIVI_RS02980 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ THIVI_RS02990 PF05922 Peptidase inhibitor I9 THIVI_RS02990 PF00082 Subtilase family THIVI_RS02995 PF01568 Molydopterin dinucleotide binding domain THIVI_RS02995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain THIVI_RS02995 PF00384 Molybdopterin oxidoreductase THIVI_RS03005 PF01985 CRS1 / YhbY (CRM) domain THIVI_RS03010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THIVI_RS03010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THIVI_RS03010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THIVI_RS03010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THIVI_RS03015 PF00183 Hsp90 protein THIVI_RS03015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS03020 PF05191 Adenylate kinase, active site lid THIVI_RS03025 PF00085 Thioredoxin THIVI_RS03035 PF02082 Transcriptional regulator THIVI_RS03040 PF05175 Methyltransferase small domain THIVI_RS03050 PF06969 HemN C-terminal domain THIVI_RS03050 PF04055 Radical SAM superfamily THIVI_RS03055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THIVI_RS03055 PF05697 Bacterial trigger factor protein (TF) THIVI_RS03055 PF05698 Bacterial trigger factor protein (TF) C-terminus THIVI_RS03060 PF00574 Clp protease THIVI_RS03065 PF07724 AAA domain (Cdc48 subfamily) THIVI_RS03065 PF10431 C-terminal, D2-small domain, of ClpB protein THIVI_RS03065 PF06689 ClpX C4-type zinc finger THIVI_RS03070 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS03070 PF05362 Lon protease (S16) C-terminal proteolytic domain THIVI_RS03070 PF02190 ATP-dependent protease La (LON) substrate-binding domain THIVI_RS03075 PF00216 Bacterial DNA-binding protein THIVI_RS03090 PF13145 PPIC-type PPIASE domain THIVI_RS03095 PF01012 Electron transfer flavoprotein domain THIVI_RS03100 PF00766 Electron transfer flavoprotein FAD-binding domain THIVI_RS03100 PF01012 Electron transfer flavoprotein domain THIVI_RS03105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain THIVI_RS03105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain THIVI_RS03105 PF02770 Acyl-CoA dehydrogenase, middle domain THIVI_RS03110 PF07584 Aerotolerance regulator N-terminal THIVI_RS03110 PF00092 von Willebrand factor type A domain THIVI_RS03120 PF00266 Aminotransferase class-V THIVI_RS03130 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS03130 PF08448 PAS fold THIVI_RS03145 PF00497 Bacterial extracellular solute-binding proteins, family 3 THIVI_RS03145 PF01464 Transglycosylase SLT domain THIVI_RS03150 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS03150 PF00072 Response regulator receiver domain THIVI_RS03155 PF01627 Hpt domain THIVI_RS03155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS03155 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS03155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS03155 PF00672 HAMP domain THIVI_RS03155 PF00072 Response regulator receiver domain THIVI_RS03160 PF00563 EAL domain THIVI_RS03160 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS03160 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS03170 PF08668 HDOD domain THIVI_RS03170 PF00563 EAL domain THIVI_RS03185 PF13732 Domain of unknown function (DUF4162) THIVI_RS03185 PF00005 ABC transporter THIVI_RS03195 PF02674 Colicin V production protein THIVI_RS03200 PF00156 Phosphoribosyl transferase domain THIVI_RS03205 PF01053 Cys/Met metabolism PLP-dependent enzyme THIVI_RS03220 PF00166 Chaperonin 10 Kd subunit THIVI_RS03225 PF00118 TCP-1/cpn60 chaperonin family THIVI_RS03235 PF00011 Hsp20/alpha crystallin family THIVI_RS03240 PF00011 Hsp20/alpha crystallin family THIVI_RS03255 PF00580 UvrD/REP helicase N-terminal domain THIVI_RS03255 PF13361 UvrD-like helicase C-terminal domain THIVI_RS03260 PF01709 Transcriptional regulator THIVI_RS03270 PF02075 Crossover junction endodeoxyribonuclease RuvC THIVI_RS03275 PF01330 RuvA N terminal domain THIVI_RS03275 PF07499 RuvA, C-terminal domain THIVI_RS03285 PF01565 FAD binding domain THIVI_RS03290 PF02754 Cysteine-rich domain THIVI_RS03290 PF13183 4Fe-4S dicluster domain THIVI_RS03295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase THIVI_RS03295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase THIVI_RS03305 PF07075 Protein of unknown function (DUF1343) THIVI_RS03310 PF02547 Queuosine biosynthesis protein THIVI_RS03320 PF00270 DEAD/DEAH box helicase THIVI_RS03320 PF00271 Helicase conserved C-terminal domain THIVI_RS03325 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) THIVI_RS03335 PF02237 Biotin protein ligase C terminal domain THIVI_RS03335 PF03099 Biotin/lipoate A/B protein ligase family THIVI_RS03345 PF03309 Type III pantothenate kinase THIVI_RS03360 PF00809 Pterin binding enzyme THIVI_RS03365 PF00912 Transglycosylase THIVI_RS03370 PF00912 Transglycosylase THIVI_RS03370 PF00905 Penicillin binding protein transpeptidase domain THIVI_RS03370 PF17092 Penicillin-binding protein OB-like domain THIVI_RS03380 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS03385 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS03385 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS03385 PF00563 EAL domain THIVI_RS03390 PF02696 Uncharacterized ACR, YdiU/UPF0061 family THIVI_RS03395 PF05661 Protein of unknown function (DUF808) THIVI_RS03400 PF02036 SCP-2 sterol transfer family THIVI_RS03415 PF03350 Uncharacterized protein family, UPF0114 THIVI_RS03420 PF00563 EAL domain THIVI_RS03420 PF01590 GAF domain THIVI_RS03420 PF00360 Phytochrome region THIVI_RS03420 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS03435 PF07690 Major Facilitator Superfamily THIVI_RS03445 PF00873 AcrB/AcrD/AcrF family THIVI_RS03450 PF13533 Biotin-lipoyl like THIVI_RS03455 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain THIVI_RS03455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain THIVI_RS03465 PF00166 Chaperonin 10 Kd subunit THIVI_RS03470 PF00118 TCP-1/cpn60 chaperonin family THIVI_RS03475 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system THIVI_RS03480 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin THIVI_RS03485 PF07715 TonB-dependent Receptor Plug Domain THIVI_RS03485 PF00593 TonB dependent receptor THIVI_RS03495 PF02277 Phosphoribosyltransferase THIVI_RS03500 PF02654 Cobalamin-5-phosphate synthase THIVI_RS03515 PF03772 Competence protein THIVI_RS03515 PF00753 Metallo-beta-lactamase superfamily THIVI_RS03515 PF13567 Domain of unknown function (DUF4131) THIVI_RS03530 PF00005 ABC transporter THIVI_RS03535 PF12704 MacB-like periplasmic core domain THIVI_RS03535 PF02687 FtsX-like permease family THIVI_RS03540 PF03739 Lipopolysaccharide export system permease LptF/LptG THIVI_RS03550 PF01433 Peptidase family M1 domain THIVI_RS03550 PF17432 Domain of unknown function (DUF3458_C) ARM repeats THIVI_RS03550 PF11940 Domain of unknown function (DUF3458) Ig-like fold THIVI_RS03555 PF00462 Glutaredoxin THIVI_RS03560 PF01479 S4 domain THIVI_RS03585 PF13194 Domain of unknown function (DUF4010) THIVI_RS03595 PF01063 Amino-transferase class IV THIVI_RS03600 PF08335 GlnD PII-uridylyltransferase THIVI_RS03600 PF03710 Glutamate-ammonia ligase adenylyltransferase THIVI_RS03605 PF01263 Aldose 1-epimerase THIVI_RS03610 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain THIVI_RS03610 PF06165 Glycosyltransferase family 36 THIVI_RS03610 PF10091 Putative glucoamylase THIVI_RS03625 PF13840 ACT domain THIVI_RS03625 PF01842 ACT domain THIVI_RS03625 PF00696 Amino acid kinase family THIVI_RS03630 PF01411 tRNA synthetases class II (A) THIVI_RS03630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THIVI_RS03630 PF02272 DHHA1 domain THIVI_RS03635 PF02631 RecX family THIVI_RS03640 PF00154 recA bacterial DNA recombination protein THIVI_RS03650 PF02464 Competence-damaged protein THIVI_RS03685 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase THIVI_RS03690 PF00535 Glycosyl transferase family 2 THIVI_RS03695 PF04751 Protein of unknown function (DUF615) THIVI_RS03700 PF01368 DHH family THIVI_RS03700 PF02272 DHHA1 domain THIVI_RS03700 PF17768 RecJ OB domain THIVI_RS03705 PF02687 FtsX-like permease family THIVI_RS03705 PF12704 MacB-like periplasmic core domain THIVI_RS03705 PF00005 ABC transporter THIVI_RS03710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THIVI_RS03720 PF01571 Aminomethyltransferase folate-binding domain THIVI_RS03760 PF01722 BolA-like protein THIVI_RS03765 PF01235 Sodium:alanine symporter family THIVI_RS03770 PF02561 Flagellar protein FliS THIVI_RS03785 PF03646 FlaG protein THIVI_RS03790 PF00669 Bacterial flagellin N-terminal helical region THIVI_RS03790 PF00700 Bacterial flagellin C-terminal helical region THIVI_RS03810 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS03810 PF16736 Single Cache-like THIVI_RS03810 PF00989 PAS fold THIVI_RS03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS03815 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS03815 PF00072 Response regulator receiver domain THIVI_RS03890 PF13181 Tetratricopeptide repeat THIVI_RS03900 PF00114 Pilin (bacterial filament) THIVI_RS03900 PF07963 Prokaryotic N-terminal methylation motif THIVI_RS03910 PF13276 HTH-like domain THIVI_RS03910 PF00665 Integrase core domain THIVI_RS03910 PF13333 Integrase core domain THIVI_RS03930 PF03819 MazG nucleotide pyrophosphohydrolase domain THIVI_RS03935 PF00293 NUDIX domain THIVI_RS03940 PF04551 GcpE protein THIVI_RS03955 PF00472 RF-1 domain THIVI_RS03960 PF00582 Universal stress protein family THIVI_RS03975 PF12704 MacB-like periplasmic core domain THIVI_RS03975 PF00005 ABC transporter THIVI_RS03975 PF02687 FtsX-like permease family THIVI_RS04045 PF03880 DbpA RNA binding domain THIVI_RS04045 PF00270 DEAD/DEAH box helicase THIVI_RS04045 PF00271 Helicase conserved C-terminal domain THIVI_RS04065 PF00266 Aminotransferase class-V THIVI_RS04075 PF01797 Transposase IS200 like THIVI_RS04080 PF00266 Aminotransferase class-V THIVI_RS04090 PF00085 Thioredoxin THIVI_RS04095 PF00085 Thioredoxin THIVI_RS04105 PF11734 TilS substrate C-terminal domain THIVI_RS04105 PF09179 TilS substrate binding domain THIVI_RS04105 PF01171 PP-loop family THIVI_RS04115 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit THIVI_RS04130 PF00795 Carbon-nitrogen hydrolase THIVI_RS04140 PF00355 Rieske [2Fe-2S] domain THIVI_RS04160 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS04160 PF00989 PAS fold THIVI_RS04160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS04165 PF00072 Response regulator receiver domain THIVI_RS04165 PF00196 Bacterial regulatory proteins, luxR family THIVI_RS04170 PF01797 Transposase IS200 like THIVI_RS04175 PF02810 SEC-C motif THIVI_RS04180 PF03781 Sulfatase-modifying factor enzyme 1 THIVI_RS04205 PF02001 Protein of unknown function DUF134 THIVI_RS04210 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal THIVI_RS04210 PF00355 Rieske [2Fe-2S] domain THIVI_RS04230 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THIVI_RS04255 PF02954 Bacterial regulatory protein, Fis family THIVI_RS04255 PF00072 Response regulator receiver domain THIVI_RS04255 PF00158 Sigma-54 interaction domain THIVI_RS04265 PF00072 Response regulator receiver domain THIVI_RS04265 PF00196 Bacterial regulatory proteins, luxR family THIVI_RS04270 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) THIVI_RS04280 PF07584 Aerotolerance regulator N-terminal THIVI_RS04280 PF00092 von Willebrand factor type A domain THIVI_RS04285 PF00669 Bacterial flagellin N-terminal helical region THIVI_RS04285 PF00700 Bacterial flagellin C-terminal helical region THIVI_RS04290 PF13847 Methyltransferase domain THIVI_RS04315 PF05711 Macrocin-O-methyltransferase (TylF) THIVI_RS04325 PF08421 Putative zinc binding domain THIVI_RS04325 PF08484 C-methyltransferase C-terminal domain THIVI_RS04330 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase THIVI_RS04335 PF16363 GDP-mannose 4,6 dehydratase THIVI_RS04340 PF00483 Nucleotidyl transferase THIVI_RS04355 PF00255 Glutathione peroxidase THIVI_RS04360 PF00970 Oxidoreductase FAD-binding domain THIVI_RS04360 PF00175 Oxidoreductase NAD-binding domain THIVI_RS04365 PF01569 PAP2 superfamily THIVI_RS04370 PF14306 PUA-like domain THIVI_RS04370 PF01747 ATP-sulfurylase THIVI_RS04380 PF00497 Bacterial extracellular solute-binding proteins, family 3 THIVI_RS04380 PF01464 Transglycosylase SLT domain THIVI_RS04385 PF05951 Bacterial protein of unknown function (DUF882) THIVI_RS04390 PF00773 RNB domain THIVI_RS04395 PF00005 ABC transporter THIVI_RS04395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THIVI_RS04405 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS04405 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THIVI_RS04415 PF00528 Binding-protein-dependent transport system inner membrane component THIVI_RS04420 PF00528 Binding-protein-dependent transport system inner membrane component THIVI_RS04420 PF12911 N-terminal TM domain of oligopeptide transport permease C THIVI_RS04425 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase THIVI_RS04425 PF09364 XFP N-terminal domain THIVI_RS04425 PF09363 XFP C-terminal domain THIVI_RS04455 PF02384 N-6 DNA Methylase THIVI_RS04455 PF12161 HsdM N-terminal domain THIVI_RS04460 PF02875 Mur ligase family, glutamate ligase domain THIVI_RS04460 PF08245 Mur ligase middle domain THIVI_RS04465 PF01039 Carboxyl transferase domain THIVI_RS04465 PF17848 Acetyl-coA carboxylase zinc finger domain THIVI_RS04470 PF00290 Tryptophan synthase alpha chain THIVI_RS04475 PF00291 Pyridoxal-phosphate dependent enzyme THIVI_RS04480 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase THIVI_RS04485 PF01416 tRNA pseudouridine synthase THIVI_RS04495 PF02774 Semialdehyde dehydrogenase, dimerisation domain THIVI_RS04495 PF01118 Semialdehyde dehydrogenase, NAD binding domain THIVI_RS04500 PF00180 Isocitrate/isopropylmalate dehydrogenase THIVI_RS04505 PF00694 Aconitase C-terminal domain THIVI_RS04510 PF00330 Aconitase family (aconitate hydratase) THIVI_RS04515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THIVI_RS04515 PF02403 Seryl-tRNA synthetase N-terminal domain THIVI_RS04530 PF00005 ABC transporter THIVI_RS04530 PF02687 FtsX-like permease family THIVI_RS04530 PF12704 MacB-like periplasmic core domain THIVI_RS04535 PF00005 ABC transporter THIVI_RS04535 PF02687 FtsX-like permease family THIVI_RS04535 PF12704 MacB-like periplasmic core domain THIVI_RS04540 PF02687 FtsX-like permease family THIVI_RS04540 PF00005 ABC transporter THIVI_RS04540 PF12704 MacB-like periplasmic core domain THIVI_RS04550 PF01475 Ferric uptake regulator family THIVI_RS04555 PF04355 SmpA / OmlA family THIVI_RS04560 PF03658 RnfH family Ubiquitin THIVI_RS04565 PF03364 Polyketide cyclase / dehydrase and lipid transport THIVI_RS04570 PF00209 Sodium:neurotransmitter symporter family THIVI_RS04575 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THIVI_RS04575 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THIVI_RS04575 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THIVI_RS04575 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THIVI_RS04580 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS04580 PF17862 AAA+ lid domain THIVI_RS04580 PF06480 FtsH Extracellular THIVI_RS04580 PF01434 Peptidase family M41 THIVI_RS04585 PF01728 FtsJ-like methyltransferase THIVI_RS04595 PF01355 High potential iron-sulfur protein THIVI_RS04600 PF00877 NlpC/P60 family THIVI_RS04605 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS04615 PF03588 Leucyl/phenylalanyl-tRNA protein transferase THIVI_RS04620 PF04377 Arginine-tRNA-protein transferase, C terminus THIVI_RS04620 PF04376 Arginine-tRNA-protein transferase, N terminus THIVI_RS04625 PF01176 Translation initiation factor 1A / IF-1 THIVI_RS04630 PF00211 Adenylate and Guanylate cyclase catalytic domain THIVI_RS04685 PF00186 Dihydrofolate reductase THIVI_RS04695 PF01467 Cytidylyltransferase-like THIVI_RS04710 PF12849 PBP superfamily domain THIVI_RS04715 PF00005 ABC transporter THIVI_RS04720 PF00528 Binding-protein-dependent transport system inner membrane component THIVI_RS04725 PF00528 Binding-protein-dependent transport system inner membrane component THIVI_RS04730 PF12849 PBP superfamily domain THIVI_RS04740 PF12849 PBP superfamily domain THIVI_RS04745 PF00343 Carbohydrate phosphorylase THIVI_RS04750 PF03976 Polyphosphate kinase 2 (PPK2) THIVI_RS04755 PF01515 Phosphate acetyl/butaryl transferase THIVI_RS04760 PF00871 Acetokinase family THIVI_RS04770 PF11339 Protein of unknown function (DUF3141) THIVI_RS04775 PF07859 alpha/beta hydrolase fold THIVI_RS04785 PF05685 Putative restriction endonuclease THIVI_RS04790 PF00171 Aldehyde dehydrogenase family THIVI_RS04800 PF04390 Lipopolysaccharide-assembly THIVI_RS04805 PF08264 Anticodon-binding domain of tRNA THIVI_RS04805 PF00133 tRNA synthetases class I (I, L, M and V) THIVI_RS04805 PF13603 Leucyl-tRNA synthetase, Domain 2 THIVI_RS04815 PF02861 Clp amino terminal domain, pathogenicity island component THIVI_RS04815 PF17871 AAA lid domain THIVI_RS04815 PF07724 AAA domain (Cdc48 subfamily) THIVI_RS04815 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS04815 PF10431 C-terminal, D2-small domain, of ClpB protein THIVI_RS04820 PF00501 AMP-binding enzyme THIVI_RS04835 PF01435 Peptidase family M48 THIVI_RS04845 PF01227 GTP cyclohydrolase I THIVI_RS04850 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain THIVI_RS04850 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain THIVI_RS04890 PF10369 Small subunit of acetolactate synthase THIVI_RS04895 PF00205 Thiamine pyrophosphate enzyme, central domain THIVI_RS04895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THIVI_RS04895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THIVI_RS04905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THIVI_RS04905 PF04073 Aminoacyl-tRNA editing domain THIVI_RS04905 PF03129 Anticodon binding domain THIVI_RS04910 PF07977 FabA-like domain THIVI_RS04915 PF04364 DNA polymerase III chi subunit, HolC THIVI_RS04920 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS04920 PF00072 Response regulator receiver domain THIVI_RS04920 PF01627 Hpt domain THIVI_RS04920 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS04920 PF00672 HAMP domain THIVI_RS04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS04925 PF00072 Response regulator receiver domain THIVI_RS04930 PF13180 PDZ domain THIVI_RS04930 PF00595 PDZ domain THIVI_RS04950 PF03186 CobD/Cbib protein THIVI_RS04965 PF10609 NUBPL iron-transfer P-loop NTPase THIVI_RS04985 PF01636 Phosphotransferase enzyme family THIVI_RS04995 PF05161 MOFRL family THIVI_RS04995 PF13660 Domain of unknown function (DUF4147) THIVI_RS05005 PF00293 NUDIX domain THIVI_RS05010 PF02938 GAD domain THIVI_RS05010 PF00152 tRNA synthetases class II (D, K and N) THIVI_RS05010 PF01336 OB-fold nucleic acid binding domain THIVI_RS05015 PF13419 Haloacid dehalogenase-like hydrolase THIVI_RS05025 PF00464 Serine hydroxymethyltransferase THIVI_RS05030 PF03477 ATP cone domain THIVI_RS05035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THIVI_RS05035 PF01872 RibD C-terminal domain THIVI_RS05040 PF00677 Lumazine binding domain THIVI_RS05045 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase THIVI_RS05045 PF00925 GTP cyclohydrolase II THIVI_RS05050 PF00885 6,7-dimethyl-8-ribityllumazine synthase THIVI_RS05055 PF01029 NusB family THIVI_RS05060 PF02769 AIR synthase related protein, C-terminal domain THIVI_RS05060 PF00586 AIR synthase related protein, N-terminal domain THIVI_RS05075 PF00403 Heavy-metal-associated domain THIVI_RS05090 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase THIVI_RS05090 PF12801 4Fe-4S binding domain THIVI_RS05090 PF13746 4Fe-4S dicluster domain THIVI_RS05095 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP THIVI_RS05095 PF13442 Cytochrome C oxidase, cbb3-type, subunit III THIVI_RS05110 PF00115 Cytochrome C and Quinol oxidase polypeptide I THIVI_RS05115 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) THIVI_RS05120 PF03334 Na+/H+ antiporter subunit THIVI_RS05135 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L THIVI_RS05140 PF00361 Proton-conducting membrane transporter THIVI_RS05145 PF00361 Proton-conducting membrane transporter THIVI_RS05150 PF00146 NADH dehydrogenase THIVI_RS05155 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THIVI_RS05160 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THIVI_RS05165 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THIVI_RS05180 PF01899 Na+/H+ ion antiporter subunit THIVI_RS05190 PF01336 OB-fold nucleic acid binding domain THIVI_RS05190 PF02811 PHP domain THIVI_RS05190 PF07733 Bacterial DNA polymerase III alpha NTPase domain THIVI_RS05190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THIVI_RS05190 PF14579 Helix-hairpin-helix motif THIVI_RS05195 PF00578 AhpC/TSA family THIVI_RS05200 PF03631 Virulence factor BrkB THIVI_RS05215 PF03966 Trm112p-like protein THIVI_RS05235 PF01867 CRISPR associated protein Cas1 THIVI_RS05265 PF18019 HD domain THIVI_RS05265 PF00270 DEAD/DEAH box helicase THIVI_RS05265 PF00271 Helicase conserved C-terminal domain THIVI_RS05280 PF01883 Iron-sulfur cluster assembly protein THIVI_RS05285 PF01458 Uncharacterized protein family (UPF0051) THIVI_RS05290 PF00005 ABC transporter THIVI_RS05295 PF01458 Uncharacterized protein family (UPF0051) THIVI_RS05305 PF12792 CSS motif domain associated with EAL THIVI_RS05305 PF00563 EAL domain THIVI_RS05330 PF03091 CutA1 divalent ion tolerance protein THIVI_RS05335 PF11412 Disulphide bond corrector protein DsbC THIVI_RS05335 PF02683 Cytochrome C biogenesis protein transmembrane region THIVI_RS05340 PF08534 Redoxin THIVI_RS05350 PF01220 Dehydroquinase class II THIVI_RS05355 PF00364 Biotin-requiring enzyme THIVI_RS05360 PF02785 Biotin carboxylase C-terminal domain THIVI_RS05360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THIVI_RS05360 PF00289 Biotin carboxylase, N-terminal domain THIVI_RS05375 PF01555 DNA methylase THIVI_RS05395 PF13649 Methyltransferase domain THIVI_RS05405 PF01207 Dihydrouridine synthase (Dus) THIVI_RS05410 PF02954 Bacterial regulatory protein, Fis family THIVI_RS05415 PF01808 AICARFT/IMPCHase bienzyme THIVI_RS05415 PF02142 MGS-like domain THIVI_RS05420 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 THIVI_RS05420 PF00132 Bacterial transferase hexapeptide (six repeats) THIVI_RS05430 PF02843 Phosphoribosylglycinamide synthetase, C domain THIVI_RS05430 PF02844 Phosphoribosylglycinamide synthetase, N domain THIVI_RS05430 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain THIVI_RS05435 PF00072 Response regulator receiver domain THIVI_RS05455 PF01636 Phosphotransferase enzyme family THIVI_RS05460 PF04453 LPS transport system D THIVI_RS05460 PF03968 OstA-like protein THIVI_RS05465 PF00639 PPIC-type PPIASE domain THIVI_RS05465 PF09312 SurA N-terminal domain THIVI_RS05470 PF04166 Pyridoxal phosphate biosynthetic protein PdxA THIVI_RS05475 PF01066 CDP-alcohol phosphatidyltransferase THIVI_RS05485 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THIVI_RS05485 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THIVI_RS05485 PF00037 4Fe-4S binding domain THIVI_RS05495 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal THIVI_RS05495 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THIVI_RS05495 PF00384 Molybdopterin oxidoreductase THIVI_RS05500 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THIVI_RS05510 PF00374 Nickel-dependent hydrogenase THIVI_RS05520 PF00106 short chain dehydrogenase THIVI_RS05525 PF00708 Acylphosphatase THIVI_RS05535 PF03358 NADPH-dependent FMN reductase THIVI_RS05540 PF00308 Bacterial dnaA protein THIVI_RS05545 PF01066 CDP-alcohol phosphatidyltransferase THIVI_RS05550 PF00586 AIR synthase related protein, N-terminal domain THIVI_RS05550 PF02769 AIR synthase related protein, C-terminal domain THIVI_RS05555 PF00551 Formyl transferase THIVI_RS05580 PF00149 Calcineurin-like phosphoesterase THIVI_RS05585 PF01430 Hsp33 protein THIVI_RS05590 PF04079 Segregation and condensation complex subunit ScpB THIVI_RS05595 PF02616 Segregation and condensation protein ScpA THIVI_RS05600 PF00579 tRNA synthetases class I (W and Y) THIVI_RS05605 PF02163 Peptidase family M50 THIVI_RS05610 PF01300 Telomere recombination THIVI_RS05615 PF02811 PHP domain THIVI_RS05625 PF12729 Four helix bundle sensory module for signal transduction THIVI_RS05625 PF00672 HAMP domain THIVI_RS05625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS05630 PF00128 Alpha amylase, catalytic domain THIVI_RS05640 PF05116 Sucrose-6F-phosphate phosphohydrolase THIVI_RS05640 PF05166 YcgL domain THIVI_RS05645 PF00862 Sucrose synthase THIVI_RS05645 PF00534 Glycosyl transferases group 1 THIVI_RS05650 PF01618 MotA/TolQ/ExbB proton channel family THIVI_RS05655 PF02472 Biopolymer transport protein ExbD/TolR THIVI_RS05675 PF00909 Ammonium Transporter Family THIVI_RS05685 PF01891 Cobalt uptake substrate-specific transmembrane region THIVI_RS05700 PF00005 ABC transporter THIVI_RS05720 PF01402 Ribbon-helix-helix protein, copG family THIVI_RS05720 PF08753 NikR C terminal nickel binding domain THIVI_RS05735 PF14403 Circularly permuted ATP-grasp type 2 THIVI_RS05760 PF00772 DnaB-like helicase N terminal domain THIVI_RS05760 PF03796 DnaB-like helicase C terminal domain THIVI_RS05765 PF01281 Ribosomal protein L9, N-terminal domain THIVI_RS05765 PF03948 Ribosomal protein L9, C-terminal domain THIVI_RS05775 PF01084 Ribosomal protein S18 THIVI_RS05780 PF01250 Ribosomal protein S6 THIVI_RS05800 PF01527 Transposase THIVI_RS05830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THIVI_RS05830 PF03466 LysR substrate binding domain THIVI_RS05835 PF01609 Transposase DDE domain THIVI_RS05835 PF13808 DDE_Tnp_1-associated THIVI_RS05840 PF01842 ACT domain THIVI_RS05845 PF00578 AhpC/TSA family THIVI_RS05850 PF13638 PIN domain THIVI_RS05850 PF02562 PhoH-like protein THIVI_RS05855 PF00291 Pyridoxal-phosphate dependent enzyme THIVI_RS05860 PF00072 Response regulator receiver domain THIVI_RS05865 PF00072 Response regulator receiver domain THIVI_RS05870 PF00072 Response regulator receiver domain THIVI_RS05885 PF00072 Response regulator receiver domain THIVI_RS05905 PF00672 HAMP domain THIVI_RS05905 PF02203 Tar ligand binding domain homologue THIVI_RS05905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS05915 PF02954 Bacterial regulatory protein, Fis family THIVI_RS05915 PF00072 Response regulator receiver domain THIVI_RS05915 PF00158 Sigma-54 interaction domain THIVI_RS05920 PF13466 STAS domain THIVI_RS05925 PF01627 Hpt domain THIVI_RS05925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS05925 PF00672 HAMP domain THIVI_RS05925 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS05925 PF00072 Response regulator receiver domain THIVI_RS05930 PF00072 Response regulator receiver domain THIVI_RS05935 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS05935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS05940 PF01339 CheB methylesterase THIVI_RS05940 PF00072 Response regulator receiver domain THIVI_RS05945 PF00672 HAMP domain THIVI_RS05945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS05945 PF02743 Cache domain THIVI_RS05950 PF03975 CheD chemotactic sensory transduction THIVI_RS05955 PF03705 CheR methyltransferase, all-alpha domain THIVI_RS05955 PF01739 CheR methyltransferase, SAM binding domain THIVI_RS05960 PF02203 Tar ligand binding domain homologue THIVI_RS05960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS05960 PF00672 HAMP domain THIVI_RS05965 PF01584 CheW-like domain THIVI_RS05970 PF09078 CheY binding THIVI_RS05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS05970 PF01584 CheW-like domain THIVI_RS05970 PF01627 Hpt domain THIVI_RS05970 PF02895 Signal transducing histidine kinase, homodimeric domain THIVI_RS05975 PF00072 Response regulator receiver domain THIVI_RS05980 PF17757 UvrB interaction domain THIVI_RS05980 PF02559 CarD-like/TRCF domain THIVI_RS05980 PF03461 TRCF domain THIVI_RS05980 PF00271 Helicase conserved C-terminal domain THIVI_RS05980 PF00270 DEAD/DEAH box helicase THIVI_RS06065 PF08447 PAS fold THIVI_RS06065 PF08448 PAS fold THIVI_RS06065 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS06065 PF00563 EAL domain THIVI_RS06080 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS06080 PF02861 Clp amino terminal domain, pathogenicity island component THIVI_RS06080 PF07724 AAA domain (Cdc48 subfamily) THIVI_RS06080 PF17871 AAA lid domain THIVI_RS06080 PF10431 C-terminal, D2-small domain, of ClpB protein THIVI_RS06090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THIVI_RS06090 PF03466 LysR substrate binding domain THIVI_RS06100 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS06100 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS06100 PF00563 EAL domain THIVI_RS06105 PF02913 FAD linked oxidases, C-terminal domain THIVI_RS06105 PF01565 FAD binding domain THIVI_RS06125 PF16199 Radical_SAM C-terminal domain THIVI_RS06125 PF04055 Radical SAM superfamily THIVI_RS06130 PF01136 Peptidase family U32 THIVI_RS06135 PF01136 Peptidase family U32 THIVI_RS06155 PF14403 Circularly permuted ATP-grasp type 2 THIVI_RS06160 PF08029 HisG, C-terminal domain THIVI_RS06160 PF01634 ATP phosphoribosyltransferase THIVI_RS06180 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS06190 PF04349 Periplasmic glucan biosynthesis protein, MdoG THIVI_RS06200 PF00535 Glycosyl transferase family 2 THIVI_RS06210 PF04279 Intracellular septation protein A THIVI_RS06215 PF03795 YCII-related domain THIVI_RS06230 PF03264 NapC/NirT cytochrome c family, N-terminal region THIVI_RS06280 PF01797 Transposase IS200 like THIVI_RS06315 PF00374 Nickel-dependent hydrogenase THIVI_RS06330 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THIVI_RS06330 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal THIVI_RS06340 PF13808 DDE_Tnp_1-associated THIVI_RS06340 PF01609 Transposase DDE domain THIVI_RS06355 PF00152 tRNA synthetases class II (D, K and N) THIVI_RS06355 PF01336 OB-fold nucleic acid binding domain THIVI_RS06360 PF00472 RF-1 domain THIVI_RS06360 PF03462 PCRF domain THIVI_RS06370 PF17149 Periplasmic sensor domain found in signal transduction proteins THIVI_RS06370 PF00672 HAMP domain THIVI_RS06370 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS06370 PF01627 Hpt domain THIVI_RS06370 PF00072 Response regulator receiver domain THIVI_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS06380 PF07715 TonB-dependent Receptor Plug Domain THIVI_RS06380 PF00593 TonB dependent receptor THIVI_RS06385 PF08668 HDOD domain THIVI_RS06385 PF00563 EAL domain THIVI_RS06390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS06390 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS06390 PF00072 Response regulator receiver domain THIVI_RS06390 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS06390 PF00672 HAMP domain THIVI_RS06390 PF01627 Hpt domain THIVI_RS06395 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS06395 PF01627 Hpt domain THIVI_RS06395 PF00672 HAMP domain THIVI_RS06395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS06395 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS06395 PF00072 Response regulator receiver domain THIVI_RS06410 PF08448 PAS fold THIVI_RS06410 PF00563 EAL domain THIVI_RS06410 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS06415 PF03423 Carbohydrate binding domain (family 25) THIVI_RS06415 PF00128 Alpha amylase, catalytic domain THIVI_RS06415 PF01373 Glycosyl hydrolase family 14 THIVI_RS06420 PF01343 Peptidase family S49 THIVI_RS06420 PF08496 Peptidase family S49 N-terminal THIVI_RS06425 PF01641 SelR domain THIVI_RS06435 PF02666 Phosphatidylserine decarboxylase THIVI_RS06440 PF06463 Molybdenum Cofactor Synthesis C THIVI_RS06440 PF04055 Radical SAM superfamily THIVI_RS06490 PF17845 FbpC C-terminal regulatory nucleotide binding domain THIVI_RS06490 PF00005 ABC transporter THIVI_RS06495 PF02796 Helix-turn-helix domain of resolvase THIVI_RS06495 PF00239 Resolvase, N terminal domain THIVI_RS06575 PF01594 AI-2E family transporter THIVI_RS06585 PF02233 NAD(P) transhydrogenase beta subunit THIVI_RS06590 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch THIVI_RS06595 PF05222 Alanine dehydrogenase/PNT, N-terminal domain THIVI_RS06595 PF01262 Alanine dehydrogenase/PNT, C-terminal domain THIVI_RS06600 PF03618 Kinase/pyrophosphorylase THIVI_RS06605 PF00875 DNA photolyase THIVI_RS06605 PF03441 FAD binding domain of DNA photolyase THIVI_RS06615 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS06615 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS06615 PF00563 EAL domain THIVI_RS06620 PF02673 Bacitracin resistance protein BacA THIVI_RS06625 PF03692 Putative zinc- or iron-chelating domain THIVI_RS06635 PF00999 Sodium/hydrogen exchanger family THIVI_RS06640 PF12849 PBP superfamily domain THIVI_RS06660 PF02253 Phospholipase A1 THIVI_RS06690 PF00361 Proton-conducting membrane transporter THIVI_RS06695 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS06695 PF18500 CadC C-terminal domain 1 THIVI_RS06710 PF00563 EAL domain THIVI_RS06710 PF08448 PAS fold THIVI_RS06710 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS06740 PF13520 Amino acid permease THIVI_RS06765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THIVI_RS06765 PF00529 HlyD membrane-fusion protein of T1SS THIVI_RS06770 PF00873 AcrB/AcrD/AcrF family THIVI_RS06780 PF01594 AI-2E family transporter THIVI_RS06790 PF03616 Sodium/glutamate symporter THIVI_RS06800 PF04960 Glutaminase THIVI_RS06805 PF03466 LysR substrate binding domain THIVI_RS06805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THIVI_RS06810 PF00175 Oxidoreductase NAD-binding domain THIVI_RS06810 PF00667 FAD binding domain THIVI_RS06810 PF00258 Flavodoxin THIVI_RS06815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THIVI_RS06815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THIVI_RS06820 PF01507 Phosphoadenosine phosphosulfate reductase family THIVI_RS06830 PF01565 FAD binding domain THIVI_RS06830 PF08031 Berberine and berberine like THIVI_RS06840 PF01103 Surface antigen THIVI_RS06840 PF17243 POTRA domain TamA domain 1 THIVI_RS06850 PF00266 Aminotransferase class-V THIVI_RS06865 PF13411 MerR HTH family regulatory protein THIVI_RS06875 PF13808 DDE_Tnp_1-associated THIVI_RS06875 PF01609 Transposase DDE domain THIVI_RS06885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THIVI_RS06885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THIVI_RS06890 PF00011 Hsp20/alpha crystallin family THIVI_RS06940 PF00593 TonB dependent receptor THIVI_RS06940 PF07715 TonB-dependent Receptor Plug Domain THIVI_RS06945 PF00072 Response regulator receiver domain THIVI_RS06945 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS06945 PF17149 Periplasmic sensor domain found in signal transduction proteins THIVI_RS06945 PF01627 Hpt domain THIVI_RS06945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS06945 PF00672 HAMP domain THIVI_RS06960 PF00072 Response regulator receiver domain THIVI_RS06960 PF00196 Bacterial regulatory proteins, luxR family THIVI_RS07010 PF06122 Conjugative relaxosome accessory transposon protein THIVI_RS07060 PF13808 DDE_Tnp_1-associated THIVI_RS07060 PF01609 Transposase DDE domain THIVI_RS07080 PF00258 Flavodoxin THIVI_RS07135 PF13749 Putative ATP-dependent DNA helicase recG C-terminal THIVI_RS07135 PF17191 RecG wedge domain THIVI_RS07135 PF00270 DEAD/DEAH box helicase THIVI_RS07200 PF12556 Cobaltochelatase CobS subunit N terminal THIVI_RS07200 PF07728 AAA domain (dynein-related subfamily) THIVI_RS07200 PF08406 CbbQ/NirQ/NorQ C-terminal THIVI_RS07215 PF00436 Single-strand binding protein family THIVI_RS07245 PF00905 Penicillin binding protein transpeptidase domain THIVI_RS07255 PF06834 TraU protein THIVI_RS07265 PF10502 Signal peptidase, peptidase S26 THIVI_RS07295 PF00183 Hsp90 protein THIVI_RS07330 PF01609 Transposase DDE domain THIVI_RS07330 PF13808 DDE_Tnp_1-associated THIVI_RS07370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THIVI_RS07370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THIVI_RS07450 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) THIVI_RS07450 PF11867 Domain of unknown function (DUF3387) THIVI_RS07450 PF18766 SWI2/SNF2 ATPase THIVI_RS07475 PF12161 HsdM N-terminal domain THIVI_RS07475 PF02384 N-6 DNA Methylase THIVI_RS07500 PF08401 Domain of unknown function (DUF1738) THIVI_RS07500 PF18818 Metallopeptidase superfamily domain THIVI_RS07500 PF13362 Toprim domain THIVI_RS07530 PF13411 MerR HTH family regulatory protein THIVI_RS07535 PF00216 Bacterial DNA-binding protein THIVI_RS07540 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain THIVI_RS07540 PF01588 Putative tRNA binding domain THIVI_RS07540 PF03147 Ferredoxin-fold anticodon binding domain THIVI_RS07540 PF03484 tRNA synthetase B5 domain THIVI_RS07540 PF03483 B3/4 domain THIVI_RS07545 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain THIVI_RS07545 PF01409 tRNA synthetases class II core domain (F) THIVI_RS07550 PF00453 Ribosomal protein L20 THIVI_RS07555 PF01632 Ribosomal protein L35 THIVI_RS07560 PF00707 Translation initiation factor IF-3, C-terminal domain THIVI_RS07560 PF05198 Translation initiation factor IF-3, N-terminal domain THIVI_RS07565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THIVI_RS07565 PF03129 Anticodon binding domain THIVI_RS07565 PF02824 TGS domain THIVI_RS07565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THIVI_RS07575 PF00753 Metallo-beta-lactamase superfamily THIVI_RS07575 PF16123 Hydroxyacylglutathione hydrolase C-terminus THIVI_RS07580 PF13292 1-deoxy-D-xylulose-5-phosphate synthase THIVI_RS07580 PF02779 Transketolase, pyrimidine binding domain THIVI_RS07580 PF02780 Transketolase, C-terminal domain THIVI_RS07585 PF03466 LysR substrate binding domain THIVI_RS07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THIVI_RS07590 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain THIVI_RS07590 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain THIVI_RS07595 PF00101 Ribulose bisphosphate carboxylase, small chain THIVI_RS07600 PF08406 CbbQ/NirQ/NorQ C-terminal THIVI_RS07600 PF07728 AAA domain (dynein-related subfamily) THIVI_RS07610 PF00092 von Willebrand factor type A domain THIVI_RS07615 PF17864 RuvB AAA lid domain THIVI_RS07615 PF05491 RuvB C-terminal winged helix domain THIVI_RS07615 PF05496 Holliday junction DNA helicase RuvB P-loop domain THIVI_RS07620 PF02913 FAD linked oxidases, C-terminal domain THIVI_RS07620 PF01565 FAD binding domain THIVI_RS07710 PF06122 Conjugative relaxosome accessory transposon protein THIVI_RS07740 PF00196 Bacterial regulatory proteins, luxR family THIVI_RS07740 PF00072 Response regulator receiver domain THIVI_RS07750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS07750 PF01627 Hpt domain THIVI_RS07750 PF00672 HAMP domain THIVI_RS07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS07750 PF00072 Response regulator receiver domain THIVI_RS07750 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS07780 PF07728 AAA domain (dynein-related subfamily) THIVI_RS07780 PF08406 CbbQ/NirQ/NorQ C-terminal THIVI_RS07780 PF12556 Cobaltochelatase CobS subunit N terminal THIVI_RS07790 PF01527 Transposase THIVI_RS07815 PF00239 Resolvase, N terminal domain THIVI_RS07815 PF02796 Helix-turn-helix domain of resolvase THIVI_RS07855 PF00762 Ferrochelatase THIVI_RS07885 PF17910 FeoB cytosolic helical domain THIVI_RS07885 PF07670 Nucleoside recognition THIVI_RS07885 PF02421 Ferrous iron transport protein B THIVI_RS07885 PF07664 Ferrous iron transport protein B C terminus THIVI_RS07910 PF13411 MerR HTH family regulatory protein THIVI_RS07915 PF00132 Bacterial transferase hexapeptide (six repeats) THIVI_RS07930 PF01609 Transposase DDE domain THIVI_RS07930 PF13808 DDE_Tnp_1-associated THIVI_RS07950 PF00148 Nitrogenase component 1 type Oxidoreductase THIVI_RS07955 PF02742 Iron dependent repressor, metal binding and dimerisation domain THIVI_RS07955 PF01325 Iron dependent repressor, N-terminal DNA binding domain THIVI_RS07955 PF18357 Diphteria toxin repressor SH3 domain THIVI_RS07995 PF03193 RsgA GTPase THIVI_RS08005 PF01609 Transposase DDE domain THIVI_RS08005 PF13808 DDE_Tnp_1-associated THIVI_RS08015 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) THIVI_RS08030 PF00148 Nitrogenase component 1 type Oxidoreductase THIVI_RS08050 PF01022 Bacterial regulatory protein, arsR family THIVI_RS08055 PF01451 Low molecular weight phosphotyrosine protein phosphatase THIVI_RS08060 PF01758 Sodium Bile acid symporter family THIVI_RS08065 PF04204 Homoserine O-succinyltransferase THIVI_RS08080 PF02277 Phosphoribosyltransferase THIVI_RS08095 PF03186 CobD/Cbib protein THIVI_RS08105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THIVI_RS08120 PF02571 Precorrin-6x reductase CbiJ/CobK THIVI_RS08125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THIVI_RS08130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THIVI_RS08135 PF02570 Precorrin-8X methylmutase THIVI_RS08140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THIVI_RS08145 PF03466 LysR substrate binding domain THIVI_RS08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THIVI_RS08150 PF01717 Cobalamin-independent synthase, Catalytic domain THIVI_RS08150 PF08267 Cobalamin-independent synthase, N-terminal domain THIVI_RS08170 PF05973 Phage derived protein Gp49-like (DUF891) THIVI_RS08180 PF01810 LysE type translocator THIVI_RS08195 PF02677 Epoxyqueuosine reductase QueH THIVI_RS08200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THIVI_RS08200 PF07685 CobB/CobQ-like glutamine amidotransferase domain THIVI_RS08215 PF00005 ABC transporter THIVI_RS08220 PF01032 FecCD transport family THIVI_RS08240 PF02310 B12 binding domain THIVI_RS08240 PF02607 B12 binding domain THIVI_RS08240 PF02574 Homocysteine S-methyltransferase THIVI_RS08240 PF00809 Pterin binding enzyme THIVI_RS08240 PF02965 Vitamin B12 dependent methionine synthase, activation domain THIVI_RS08260 PF07685 CobB/CobQ-like glutamine amidotransferase domain THIVI_RS08260 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THIVI_RS08265 PF04055 Radical SAM superfamily THIVI_RS08265 PF02310 B12 binding domain THIVI_RS08290 PF00005 ABC transporter THIVI_RS08300 PF04358 DsrC like protein THIVI_RS08305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THIVI_RS08305 PF03466 LysR substrate binding domain THIVI_RS08310 PF00072 Response regulator receiver domain THIVI_RS08310 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS08315 PF00072 Response regulator receiver domain THIVI_RS08330 PF00478 IMP dehydrogenase / GMP reductase domain THIVI_RS08330 PF00571 CBS domain THIVI_RS08335 PF00313 'Cold-shock' DNA-binding domain THIVI_RS08340 PF12848 ABC transporter THIVI_RS08340 PF00005 ABC transporter THIVI_RS08345 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS08345 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THIVI_RS08345 PF10518 TAT (twin-arginine translocation) pathway signal sequence THIVI_RS08365 PF00141 Peroxidase THIVI_RS08370 PF03109 ABC1 family THIVI_RS08380 PF01209 ubiE/COQ5 methyltransferase family THIVI_RS08395 PF07724 AAA domain (Cdc48 subfamily) THIVI_RS08395 PF10431 C-terminal, D2-small domain, of ClpB protein THIVI_RS08395 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS08400 PF00227 Proteasome subunit THIVI_RS08410 PF01850 PIN domain THIVI_RS08420 PF13537 Glutamine amidotransferase domain THIVI_RS08420 PF00733 Asparagine synthase THIVI_RS08450 PF02254 TrkA-N domain THIVI_RS08450 PF00999 Sodium/hydrogen exchanger family THIVI_RS08460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THIVI_RS08460 PF00128 Alpha amylase, catalytic domain THIVI_RS08465 PF12832 MFS_1 like family THIVI_RS08470 PF01264 Chorismate synthase THIVI_RS08475 PF02321 Outer membrane efflux protein THIVI_RS08480 PF00561 alpha/beta hydrolase fold THIVI_RS08485 PF00194 Eukaryotic-type carbonic anhydrase THIVI_RS08490 PF12804 MobA-like NTP transferase domain THIVI_RS08495 PF00011 Hsp20/alpha crystallin family THIVI_RS08500 PF00563 EAL domain THIVI_RS08500 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS08500 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS08505 PF04168 A predicted alpha-helical domain with a conserved ER motif. THIVI_RS08505 PF14403 Circularly permuted ATP-grasp type 2 THIVI_RS08520 PF00156 Phosphoribosyl transferase domain THIVI_RS08525 PF06968 Biotin and Thiamin Synthesis associated domain THIVI_RS08525 PF04055 Radical SAM superfamily THIVI_RS08530 PF00155 Aminotransferase class I and II THIVI_RS08535 PF00561 alpha/beta hydrolase fold THIVI_RS08540 PF08241 Methyltransferase domain THIVI_RS08555 PF03449 Transcription elongation factor, N-terminal THIVI_RS08555 PF01272 Transcription elongation factor, GreA/GreB, C-term THIVI_RS08560 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain THIVI_RS08560 PF02142 MGS-like domain THIVI_RS08560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THIVI_RS08565 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain THIVI_RS08565 PF00117 Glutamine amidotransferase class-I THIVI_RS08570 PF00501 AMP-binding enzyme THIVI_RS08570 PF13193 AMP-binding enzyme C-terminal domain THIVI_RS08605 PF01991 ATP synthase (E/31 kDa) subunit THIVI_RS08610 PF16886 ATPsynthase alpha/beta subunit N-term extension THIVI_RS08610 PF02874 ATP synthase alpha/beta family, beta-barrel domain THIVI_RS08610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THIVI_RS08645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THIVI_RS08655 PF01813 ATP synthase subunit D THIVI_RS08660 PF00117 Glutamine amidotransferase class-I THIVI_RS08675 PF00691 OmpA family THIVI_RS08685 PF04052 TolB amino-terminal domain THIVI_RS08685 PF07676 WD40-like Beta Propeller Repeat THIVI_RS08695 PF02472 Biopolymer transport protein ExbD/TolR THIVI_RS08700 PF01618 MotA/TolQ/ExbB proton channel family THIVI_RS08705 PF03061 Thioesterase superfamily THIVI_RS08715 PF00501 AMP-binding enzyme THIVI_RS08730 PF00210 Ferritin-like domain THIVI_RS08735 PF14489 QueF-like protein THIVI_RS08740 PF00883 Cytosol aminopeptidase family, catalytic domain THIVI_RS08740 PF02789 Cytosol aminopeptidase family, N-terminal domain THIVI_RS08745 PF03739 Lipopolysaccharide export system permease LptF/LptG THIVI_RS08750 PF00899 ThiF family THIVI_RS08755 PF01026 TatD related DNase THIVI_RS08765 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) THIVI_RS08775 PF10518 TAT (twin-arginine translocation) pathway signal sequence THIVI_RS08775 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS08775 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THIVI_RS08785 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THIVI_RS08785 PF10518 TAT (twin-arginine translocation) pathway signal sequence THIVI_RS08785 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS08810 PF00005 ABC transporter THIVI_RS08830 PF00753 Metallo-beta-lactamase superfamily THIVI_RS08835 PF03030 Inorganic H+ pyrophosphatase THIVI_RS08840 PF02424 ApbE family THIVI_RS08860 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS08860 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS08860 PF00563 EAL domain THIVI_RS08865 PF00072 Response regulator receiver domain THIVI_RS08865 PF01627 Hpt domain THIVI_RS08865 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS08865 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS08865 PF00672 HAMP domain THIVI_RS08870 PF01207 Dihydrouridine synthase (Dus) THIVI_RS08890 PF12441 CopG antitoxin of type II toxin-antitoxin system THIVI_RS08895 PF01571 Aminomethyltransferase folate-binding domain THIVI_RS08895 PF08669 Glycine cleavage T-protein C-terminal barrel domain THIVI_RS08900 PF01597 Glycine cleavage H-protein THIVI_RS08905 PF02347 Glycine cleavage system P-protein THIVI_RS08910 PF08534 Redoxin THIVI_RS08915 PF02347 Glycine cleavage system P-protein THIVI_RS08920 PF01219 Prokaryotic diacylglycerol kinase THIVI_RS08925 PF02342 TerD domain THIVI_RS08930 PF17863 AAA lid domain THIVI_RS08935 PF01078 Magnesium chelatase, subunit ChlI THIVI_RS08935 PF17863 AAA lid domain THIVI_RS08940 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus THIVI_RS08940 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term THIVI_RS08945 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ THIVI_RS08955 PF00571 CBS domain THIVI_RS08955 PF03471 Transporter associated domain THIVI_RS08960 PF02130 Uncharacterized protein family UPF0054 THIVI_RS08965 PF02562 PhoH-like protein THIVI_RS08970 PF00919 Uncharacterized protein family UPF0004 THIVI_RS08970 PF04055 Radical SAM superfamily THIVI_RS08970 PF01938 TRAM domain THIVI_RS08995 PF03330 Lytic transglycolase THIVI_RS09000 PF04333 MlaA lipoprotein THIVI_RS09010 PF08448 PAS fold THIVI_RS09010 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS09020 PF00072 Response regulator receiver domain THIVI_RS09025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS09025 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS09025 PF01627 Hpt domain THIVI_RS09025 PF00989 PAS fold THIVI_RS09025 PF18415 Histidine kinase receptor ArcB trans-membrane domain THIVI_RS09025 PF00072 Response regulator receiver domain THIVI_RS09035 PF00929 Exonuclease THIVI_RS09040 PF00462 Glutaredoxin THIVI_RS09045 PF00733 Asparagine synthase THIVI_RS09045 PF13537 Glutamine amidotransferase domain THIVI_RS09050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain THIVI_RS09050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain THIVI_RS09055 PF00202 Aminotransferase class-III THIVI_RS09060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THIVI_RS09060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THIVI_RS09080 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain THIVI_RS09080 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain THIVI_RS09080 PF00207 Alpha-2-macroglobulin family THIVI_RS09080 PF11974 Bacterial alpha-2-macroglobulin MG3 domain THIVI_RS09080 PF07678 A-macroglobulin TED domain THIVI_RS09080 PF01835 MG2 domain THIVI_RS09080 PF17962 Bacterial macroglobulin domain 6 THIVI_RS09080 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain THIVI_RS09080 PF07703 Alpha-2-macroglobulin bait region domain THIVI_RS09100 PF00474 Sodium:solute symporter family THIVI_RS09110 PF16325 Peptidase family U32 C-terminal domain THIVI_RS09110 PF01136 Peptidase family U32 THIVI_RS09160 PF00330 Aconitase family (aconitate hydratase) THIVI_RS09160 PF00694 Aconitase C-terminal domain THIVI_RS09165 PF00206 Lyase THIVI_RS09165 PF08328 Adenylosuccinate lyase C-terminal THIVI_RS09170 PF00691 OmpA family THIVI_RS09170 PF01389 OmpA-like transmembrane domain THIVI_RS09190 PF00873 AcrB/AcrD/AcrF family THIVI_RS09195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THIVI_RS09195 PF00529 HlyD membrane-fusion protein of T1SS THIVI_RS09205 PF02872 5'-nucleotidase, C-terminal domain THIVI_RS09215 PF00391 PEP-utilising enzyme, mobile domain THIVI_RS09215 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain THIVI_RS09215 PF02896 PEP-utilising enzyme, TIM barrel domain THIVI_RS09220 PF13462 Thioredoxin THIVI_RS09225 PF00920 Dehydratase family THIVI_RS09270 PF00902 Sec-independent protein translocase protein (TatC) THIVI_RS09280 PF03411 Penicillin-insensitive murein endopeptidase THIVI_RS09285 PF02978 Signal peptide binding domain THIVI_RS09285 PF00448 SRP54-type protein, GTPase domain THIVI_RS09285 PF02881 SRP54-type protein, helical bundle domain THIVI_RS09290 PF01578 Cytochrome C assembly protein THIVI_RS09300 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family THIVI_RS09305 PF00595 PDZ domain THIVI_RS09305 PF13180 PDZ domain THIVI_RS09310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THIVI_RS09325 PF00485 Phosphoribulokinase / Uridine kinase family THIVI_RS09330 PF00072 Response regulator receiver domain THIVI_RS09330 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS09330 PF01627 Hpt domain THIVI_RS09330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS09330 PF00672 HAMP domain THIVI_RS09340 PF01380 SIS domain THIVI_RS09350 PF02508 Rnf-Nqr subunit, membrane protein THIVI_RS09355 PF04060 Putative Fe-S cluster THIVI_RS09360 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THIVI_RS09360 PF10531 SLBB domain THIVI_RS09360 PF13375 RnfC Barrel sandwich hybrid domain THIVI_RS09360 PF12838 4Fe-4S dicluster domain THIVI_RS09365 PF03116 NQR2, RnfD, RnfE family THIVI_RS09370 PF04205 FMN-binding domain THIVI_RS09375 PF02508 Rnf-Nqr subunit, membrane protein THIVI_RS09380 PF00529 HlyD membrane-fusion protein of T1SS THIVI_RS09380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THIVI_RS09385 PF01541 GIY-YIG catalytic domain THIVI_RS09390 PF00664 ABC transporter transmembrane region THIVI_RS09390 PF00005 ABC transporter THIVI_RS09450 PF13417 Glutathione S-transferase, N-terminal domain THIVI_RS09450 PF00043 Glutathione S-transferase, C-terminal domain THIVI_RS09455 PF01614 Bacterial transcriptional regulator THIVI_RS09455 PF09339 IclR helix-turn-helix domain THIVI_RS09480 PF02421 Ferrous iron transport protein B THIVI_RS09480 PF07670 Nucleoside recognition THIVI_RS09480 PF07664 Ferrous iron transport protein B C terminus THIVI_RS09480 PF17910 FeoB cytosolic helical domain THIVI_RS09490 PF00005 ABC transporter THIVI_RS09525 PF01184 GPR1/FUN34/yaaH family THIVI_RS09530 PF08269 Cache domain THIVI_RS09530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS09540 PF03372 Endonuclease/Exonuclease/phosphatase family THIVI_RS09545 PF00916 Sulfate permease family THIVI_RS09545 PF01740 STAS domain THIVI_RS09550 PF00483 Nucleotidyl transferase THIVI_RS09570 PF03209 PUCC protein THIVI_RS09575 PF00556 Antenna complex alpha/beta subunit THIVI_RS09585 PF00556 Antenna complex alpha/beta subunit THIVI_RS09590 PF00556 Antenna complex alpha/beta subunit THIVI_RS09600 PF00556 Antenna complex alpha/beta subunit THIVI_RS09615 PF04055 Radical SAM superfamily THIVI_RS09615 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family THIVI_RS09620 PF00293 NUDIX domain THIVI_RS09625 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain THIVI_RS09635 PF00556 Antenna complex alpha/beta subunit THIVI_RS09640 PF00556 Antenna complex alpha/beta subunit THIVI_RS09645 PF00556 Antenna complex alpha/beta subunit THIVI_RS09650 PF02276 Photosynthetic reaction centre cytochrome C subunit THIVI_RS09655 PF00124 Photosynthetic reaction centre protein THIVI_RS09660 PF00124 Photosynthetic reaction centre protein THIVI_RS09665 PF00556 Antenna complex alpha/beta subunit THIVI_RS09670 PF00556 Antenna complex alpha/beta subunit THIVI_RS09675 PF08369 Proto-chlorophyllide reductase 57 kD subunit THIVI_RS09675 PF00148 Nitrogenase component 1 type Oxidoreductase THIVI_RS09695 PF00148 Nitrogenase component 1 type Oxidoreductase THIVI_RS09700 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family THIVI_RS09710 PF16864 Dimerisation domain THIVI_RS09710 PF00891 O-methyltransferase domain THIVI_RS09715 PF00348 Polyprenyl synthetase THIVI_RS09720 PF01593 Flavin containing amine oxidoreductase THIVI_RS09740 PF00106 short chain dehydrogenase THIVI_RS09745 PF08241 Methyltransferase domain THIVI_RS09755 PF03109 ABC1 family THIVI_RS09760 PF03033 Glycosyltransferase family 28 N-terminal domain THIVI_RS09760 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase THIVI_RS09770 PF01593 Flavin containing amine oxidoreductase THIVI_RS09775 PF03747 ADP-ribosylglycohydrolase THIVI_RS09780 PF13538 UvrD-like helicase C-terminal domain THIVI_RS09785 PF00580 UvrD/REP helicase N-terminal domain THIVI_RS09785 PF12705 PD-(D/E)XK nuclease superfamily THIVI_RS09785 PF13361 UvrD-like helicase C-terminal domain THIVI_RS09790 PF17946 RecC C-terminal domain THIVI_RS09795 PF09820 Predicted AAA-ATPase THIVI_RS09795 PF08011 PD-(D/E)XK nuclease superfamily THIVI_RS09800 PF00271 Helicase conserved C-terminal domain THIVI_RS09800 PF00270 DEAD/DEAH box helicase THIVI_RS09805 PF13847 Methyltransferase domain THIVI_RS09875 PF13808 DDE_Tnp_1-associated THIVI_RS09875 PF01609 Transposase DDE domain THIVI_RS09950 PF07584 Aerotolerance regulator N-terminal THIVI_RS09950 PF13519 von Willebrand factor type A domain THIVI_RS09955 PF00092 von Willebrand factor type A domain THIVI_RS09965 PF01882 Protein of unknown function DUF58 THIVI_RS09980 PF17863 AAA lid domain THIVI_RS09980 PF07726 ATPase family associated with various cellular activities (AAA) THIVI_RS09985 PF00009 Elongation factor Tu GTP binding domain THIVI_RS09985 PF03144 Elongation factor Tu domain 2 THIVI_RS09985 PF00679 Elongation factor G C-terminus THIVI_RS09990 PF00561 alpha/beta hydrolase fold THIVI_RS09995 PF02580 D-Tyr-tRNA(Tyr) deacylase THIVI_RS10025 PF09190 DALR domain THIVI_RS10025 PF01406 tRNA synthetases class I (C) catalytic domain THIVI_RS10030 PF02492 CobW/HypB/UreG, nucleotide-binding domain THIVI_RS10035 PF01730 UreF THIVI_RS10040 PF02814 UreE urease accessory protein, N-terminal domain THIVI_RS10040 PF05194 UreE urease accessory protein, C-terminal domain THIVI_RS10045 PF00449 Urease alpha-subunit, N-terminal domain THIVI_RS10045 PF01979 Amidohydrolase family THIVI_RS10050 PF00699 Urease beta subunit THIVI_RS10055 PF00547 Urease, gamma subunit THIVI_RS10060 PF01774 UreD urease accessory protein THIVI_RS10065 PF00005 ABC transporter THIVI_RS10075 PF12399 Branched-chain amino acid ATP-binding cassette transporter THIVI_RS10075 PF00005 ABC transporter THIVI_RS10085 PF02653 Branched-chain amino acid transport system / permease component THIVI_RS10095 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD THIVI_RS10135 PF00672 HAMP domain THIVI_RS10135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS10135 PF17200 Single Cache domain 2 THIVI_RS10140 PF00294 pfkB family carbohydrate kinase THIVI_RS10140 PF01467 Cytidylyltransferase-like THIVI_RS10145 PF00672 HAMP domain THIVI_RS10145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS10150 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) THIVI_RS10170 PF00072 Response regulator receiver domain THIVI_RS10170 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS10175 PF18698 Histidine kinase sensor domain THIVI_RS10175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS10175 PF00672 HAMP domain THIVI_RS10175 PF00989 PAS fold THIVI_RS10175 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS10190 PF00563 EAL domain THIVI_RS10190 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS10190 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS10195 PF00343 Carbohydrate phosphorylase THIVI_RS10200 PF09364 XFP N-terminal domain THIVI_RS10200 PF09363 XFP C-terminal domain THIVI_RS10200 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase THIVI_RS10205 PF05685 Putative restriction endonuclease THIVI_RS10210 PF09382 RQC domain THIVI_RS10210 PF16124 RecQ zinc-binding THIVI_RS10210 PF00270 DEAD/DEAH box helicase THIVI_RS10210 PF00271 Helicase conserved C-terminal domain THIVI_RS10210 PF00570 HRDC domain THIVI_RS10230 PF03989 DNA gyrase C-terminal domain, beta-propeller THIVI_RS10230 PF00521 DNA gyrase/topoisomerase IV, subunit A THIVI_RS10235 PF00266 Aminotransferase class-V THIVI_RS10240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THIVI_RS10240 PF01842 ACT domain THIVI_RS10240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THIVI_RS10245 PF00800 Prephenate dehydratase THIVI_RS10245 PF01817 Chorismate mutase type II THIVI_RS10245 PF01842 ACT domain THIVI_RS10250 PF00155 Aminotransferase class I and II THIVI_RS10255 PF02153 Prephenate dehydrogenase THIVI_RS10260 PF01895 PhoU domain THIVI_RS10265 PF02579 Dinitrogenase iron-molybdenum cofactor THIVI_RS10265 PF04055 Radical SAM superfamily THIVI_RS10270 PF12838 4Fe-4S dicluster domain THIVI_RS10275 PF03960 ArsC family THIVI_RS10280 PF00753 Metallo-beta-lactamase superfamily THIVI_RS10280 PF00258 Flavodoxin THIVI_RS10285 PF00111 2Fe-2S iron-sulfur cluster binding domain THIVI_RS10290 PF00111 2Fe-2S iron-sulfur cluster binding domain THIVI_RS10295 PF04891 NifQ THIVI_RS10300 PF03747 ADP-ribosylglycohydrolase THIVI_RS10340 PF05567 Neisseria PilC beta-propeller domain THIVI_RS10345 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor THIVI_RS10345 PF07963 Prokaryotic N-terminal methylation motif THIVI_RS10370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THIVI_RS10370 PF00205 Thiamine pyrophosphate enzyme, central domain THIVI_RS10370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THIVI_RS10380 PF01590 GAF domain THIVI_RS10380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS10380 PF08446 PAS fold THIVI_RS10380 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS10380 PF00360 Phytochrome region THIVI_RS10385 PF00072 Response regulator receiver domain THIVI_RS10390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS10390 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS10390 PF09308 LuxQ, periplasmic THIVI_RS10390 PF00072 Response regulator receiver domain THIVI_RS10395 PF01274 Malate synthase THIVI_RS10405 PF01594 AI-2E family transporter THIVI_RS10415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THIVI_RS10415 PF03466 LysR substrate binding domain THIVI_RS10425 PF08274 PhnA Zinc-Ribbon THIVI_RS10425 PF03831 PhnA domain THIVI_RS10435 PF13686 DsrE/DsrF/DrsH-like family THIVI_RS10440 PF01206 Sulfurtransferase TusA THIVI_RS10445 PF00581 Rhodanese-like domain THIVI_RS10450 PF14824 Sirohaem biosynthesis protein central THIVI_RS10450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THIVI_RS10450 PF10414 Sirohaem synthase dimerisation region THIVI_RS10460 PF02342 TerD domain THIVI_RS10470 PF02342 TerD domain THIVI_RS10485 PF02342 TerD domain THIVI_RS10490 PF02342 TerD domain THIVI_RS10505 PF11202 Phosphoribosyl transferase (PRTase) THIVI_RS10505 PF15608 PELOTA RNA binding domain THIVI_RS10525 PF01370 NAD dependent epimerase/dehydratase family THIVI_RS10530 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THIVI_RS10530 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain THIVI_RS10530 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain THIVI_RS10535 PF01476 LysM domain THIVI_RS10535 PF04972 BON domain THIVI_RS10560 PF01722 BolA-like protein THIVI_RS10565 PF16658 Class II release factor RF3, C-terminal domain THIVI_RS10565 PF00009 Elongation factor Tu GTP binding domain THIVI_RS10575 PF01343 Peptidase family S49 THIVI_RS10580 PF13419 Haloacid dehalogenase-like hydrolase THIVI_RS10585 PF01479 S4 domain THIVI_RS10585 PF00849 RNA pseudouridylate synthase THIVI_RS10595 PF00575 S1 RNA binding domain THIVI_RS10595 PF10150 Ribonuclease E/G family THIVI_RS10595 PF12111 Polyribonucleotide phosphorylase C terminal THIVI_RS10605 PF13439 Glycosyltransferase Family 4 THIVI_RS10605 PF00534 Glycosyl transferases group 1 THIVI_RS10615 PF01451 Low molecular weight phosphotyrosine protein phosphatase THIVI_RS10640 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor THIVI_RS10640 PF07963 Prokaryotic N-terminal methylation motif THIVI_RS10645 PF07963 Prokaryotic N-terminal methylation motif THIVI_RS10645 PF12019 Type II transport protein GspH THIVI_RS10670 PF11842 Domain of unknown function (DUF3362) THIVI_RS10670 PF04055 Radical SAM superfamily THIVI_RS10670 PF08497 Radical SAM N-terminal THIVI_RS10675 PF01618 MotA/TolQ/ExbB proton channel family THIVI_RS10680 PF13677 Membrane MotB of proton-channel complex MotA/MotB THIVI_RS10680 PF00691 OmpA family THIVI_RS10695 PF00132 Bacterial transferase hexapeptide (six repeats) THIVI_RS10695 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD THIVI_RS10705 PF02080 TrkA-C domain THIVI_RS10705 PF18030 RimK PreATP-grasp domain THIVI_RS10705 PF08443 RimK-like ATP-grasp domain THIVI_RS10720 PF07687 Peptidase dimerisation domain THIVI_RS10720 PF01546 Peptidase family M20/M25/M40 THIVI_RS10725 PF04228 Putative neutral zinc metallopeptidase THIVI_RS10730 PF13091 PLD-like domain THIVI_RS10730 PF13396 Phospholipase_D-nuclease N-terminal THIVI_RS10740 PF00206 Lyase THIVI_RS10740 PF14698 Argininosuccinate lyase C-terminal THIVI_RS10745 PF04397 LytTr DNA-binding domain THIVI_RS10745 PF00072 Response regulator receiver domain THIVI_RS10770 PF03144 Elongation factor Tu domain 2 THIVI_RS10770 PF00009 Elongation factor Tu GTP binding domain THIVI_RS10770 PF03764 Elongation factor G, domain IV THIVI_RS10770 PF14492 Elongation Factor G, domain II THIVI_RS10770 PF00679 Elongation factor G C-terminus THIVI_RS10775 PF01161 Phosphatidylethanolamine-binding protein THIVI_RS10780 PF01380 SIS domain THIVI_RS10780 PF00571 CBS domain THIVI_RS10800 PF00005 ABC transporter THIVI_RS10800 PF12399 Branched-chain amino acid ATP-binding cassette transporter THIVI_RS10805 PF00309 Sigma-54 factor, Activator interacting domain (AID) THIVI_RS10805 PF04963 Sigma-54 factor, core binding domain THIVI_RS10805 PF04552 Sigma-54, DNA binding domain THIVI_RS10810 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein THIVI_RS10815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 THIVI_RS10820 PF02603 HPr Serine kinase N terminus THIVI_RS10820 PF07475 HPr Serine kinase C-terminal domain THIVI_RS10825 PF03668 P-loop ATPase protein family THIVI_RS10835 PF00381 PTS HPr component phosphorylation site THIVI_RS10840 PF02896 PEP-utilising enzyme, TIM barrel domain THIVI_RS10840 PF05524 PEP-utilising enzyme, N-terminal THIVI_RS10840 PF00391 PEP-utilising enzyme, mobile domain THIVI_RS10845 PF00571 CBS domain THIVI_RS10845 PF01769 Divalent cation transporter THIVI_RS10845 PF03448 MgtE intracellular N domain THIVI_RS10860 PF01209 ubiE/COQ5 methyltransferase family THIVI_RS10875 PF00975 Thioesterase domain THIVI_RS10875 PF00550 Phosphopantetheine attachment site THIVI_RS10875 PF00668 Condensation domain THIVI_RS10875 PF13193 AMP-binding enzyme C-terminal domain THIVI_RS10875 PF00501 AMP-binding enzyme THIVI_RS10880 PF07977 FabA-like domain THIVI_RS10900 PF00109 Beta-ketoacyl synthase, N-terminal domain THIVI_RS10900 PF02801 Beta-ketoacyl synthase, C-terminal domain THIVI_RS10915 PF00535 Glycosyl transferase family 2 THIVI_RS10945 PF02601 Exonuclease VII, large subunit THIVI_RS10945 PF13742 OB-fold nucleic acid binding domain THIVI_RS10955 PF00571 CBS domain THIVI_RS10955 PF00478 IMP dehydrogenase / GMP reductase domain THIVI_RS10970 PF00117 Glutamine amidotransferase class-I THIVI_RS10970 PF00958 GMP synthase C terminal domain THIVI_RS10970 PF02540 NAD synthase THIVI_RS10985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family THIVI_RS10990 PF14437 MafB19-like deaminase THIVI_RS10995 PF00268 Ribonucleotide reductase, small chain THIVI_RS11005 PF04650 YSIRK type signal peptide THIVI_RS11005 PF10425 C-terminus of bacterial fibrinogen-binding adhesin THIVI_RS11005 PF17961 Bacterial Ig domain THIVI_RS11005 PF00746 LPXTG cell wall anchor motif THIVI_RS11005 PF17210 SdrD B-like domain THIVI_RS11015 PF02080 TrkA-C domain THIVI_RS11015 PF03471 Transporter associated domain THIVI_RS11015 PF00999 Sodium/hydrogen exchanger family THIVI_RS11020 PF06865 Pyrimidine/purine nucleoside phosphorylase THIVI_RS11035 PF10431 C-terminal, D2-small domain, of ClpB protein THIVI_RS11035 PF07724 AAA domain (Cdc48 subfamily) THIVI_RS11035 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS11035 PF17871 AAA lid domain THIVI_RS11045 PF05947 Type VI secretion system, TssF THIVI_RS11050 PF04965 Gene 25-like lysozyme THIVI_RS11055 PF07024 ImpE protein THIVI_RS11060 PF05638 Type VI secretion system effector, Hcp THIVI_RS11065 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath THIVI_RS11070 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 THIVI_RS11075 PF06812 ImpA, N-terminal, type VI secretion system THIVI_RS11105 PF06715 Gp5 C-terminal repeat (3 copies) THIVI_RS11105 PF04717 Type VI secretion system, phage-baseplate injector THIVI_RS11120 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE THIVI_RS11125 PF13677 Membrane MotB of proton-channel complex MotA/MotB THIVI_RS11125 PF00691 OmpA family THIVI_RS11130 PF06744 Type VI secretion protein IcmF C-terminal THIVI_RS11130 PF14331 ImcF-related N-terminal domain THIVI_RS11130 PF06761 Intracellular multiplication and human macrophage-killing THIVI_RS11155 PF00293 NUDIX domain THIVI_RS11160 PF01960 ArgJ family THIVI_RS11165 PF01043 SecA preprotein cross-linking domain THIVI_RS11165 PF07516 SecA Wing and Scaffold domain THIVI_RS11165 PF02810 SEC-C motif THIVI_RS11165 PF07517 SecA DEAD-like domain THIVI_RS11170 PF01476 LysM domain THIVI_RS11170 PF01551 Peptidase family M23 THIVI_RS11180 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase THIVI_RS11185 PF00091 Tubulin/FtsZ family, GTPase domain THIVI_RS11185 PF12327 FtsZ family, C-terminal domain THIVI_RS11190 PF02491 SHS2 domain inserted in FTSA THIVI_RS11195 PF03799 Cell division protein FtsQ THIVI_RS11195 PF08478 POTRA domain, FtsQ-type THIVI_RS11200 PF07478 D-ala D-ala ligase C-terminus THIVI_RS11200 PF01820 D-ala D-ala ligase N-terminus THIVI_RS11205 PF01565 FAD binding domain THIVI_RS11205 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain THIVI_RS11210 PF08245 Mur ligase middle domain THIVI_RS11210 PF02875 Mur ligase family, glutamate ligase domain THIVI_RS11210 PF01225 Mur ligase family, catalytic domain THIVI_RS11215 PF04101 Glycosyltransferase family 28 C-terminal domain THIVI_RS11215 PF03033 Glycosyltransferase family 28 N-terminal domain THIVI_RS11220 PF01098 Cell cycle protein THIVI_RS11225 PF08245 Mur ligase middle domain THIVI_RS11225 PF02875 Mur ligase family, glutamate ligase domain THIVI_RS11230 PF00953 Glycosyl transferase family 4 THIVI_RS11230 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 THIVI_RS11235 PF08245 Mur ligase middle domain THIVI_RS11235 PF01225 Mur ligase family, catalytic domain THIVI_RS11235 PF02875 Mur ligase family, glutamate ligase domain THIVI_RS11240 PF00905 Penicillin binding protein transpeptidase domain THIVI_RS11240 PF03717 Penicillin-binding Protein dimerisation domain THIVI_RS11245 PF04999 Cell division protein FtsL THIVI_RS11250 PF01795 MraW methylase family THIVI_RS11255 PF02381 MraZ protein, putative antitoxin-like THIVI_RS11260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THIVI_RS11265 PF04348 LppC putative lipoprotein THIVI_RS11270 PF02021 Uncharacterised protein family UPF0102 THIVI_RS11275 PF04972 BON domain THIVI_RS11280 PF02913 FAD linked oxidases, C-terminal domain THIVI_RS11280 PF01565 FAD binding domain THIVI_RS11300 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS11300 PF00563 EAL domain THIVI_RS11300 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS11305 PF00072 Response regulator receiver domain THIVI_RS11305 PF00211 Adenylate and Guanylate cyclase catalytic domain THIVI_RS11320 PF01116 Fructose-bisphosphate aldolase class-II THIVI_RS11330 PF02887 Pyruvate kinase, alpha/beta domain THIVI_RS11330 PF00224 Pyruvate kinase, barrel domain THIVI_RS11335 PF00162 Phosphoglycerate kinase THIVI_RS11355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THIVI_RS11355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain THIVI_RS11360 PF02779 Transketolase, pyrimidine binding domain THIVI_RS11360 PF00456 Transketolase, thiamine diphosphate binding domain THIVI_RS11360 PF02780 Transketolase, C-terminal domain THIVI_RS11370 PF02772 S-adenosylmethionine synthetase, central domain THIVI_RS11370 PF02773 S-adenosylmethionine synthetase, C-terminal domain THIVI_RS11370 PF00438 S-adenosylmethionine synthetase, N-terminal domain THIVI_RS11395 PF00672 HAMP domain THIVI_RS11395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS11415 PF00360 Phytochrome region THIVI_RS11415 PF08446 PAS fold THIVI_RS11415 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS11415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS11415 PF01590 GAF domain THIVI_RS11420 PF13426 PAS domain THIVI_RS11420 PF13188 PAS domain THIVI_RS11420 PF02954 Bacterial regulatory protein, Fis family THIVI_RS11430 PF13356 Arm DNA-binding domain THIVI_RS11430 PF00589 Phage integrase family THIVI_RS11495 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THIVI_RS11510 PF00072 Response regulator receiver domain THIVI_RS11520 PF00360 Phytochrome region THIVI_RS11520 PF08446 PAS fold THIVI_RS11520 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS11520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS11520 PF01590 GAF domain THIVI_RS11530 PF07927 HicA toxin of bacterial toxin-antitoxin, THIVI_RS11545 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THIVI_RS11545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THIVI_RS11555 PF01678 Diaminopimelate epimerase THIVI_RS11565 PF00589 Phage integrase family THIVI_RS11565 PF02899 Phage integrase, N-terminal SAM-like domain THIVI_RS11585 PF14535 AMP-binding enzyme C-terminal domain THIVI_RS11585 PF00501 AMP-binding enzyme THIVI_RS11595 PF00501 AMP-binding enzyme THIVI_RS11595 PF14535 AMP-binding enzyme C-terminal domain THIVI_RS11605 PF00501 AMP-binding enzyme THIVI_RS11605 PF13193 AMP-binding enzyme C-terminal domain THIVI_RS11610 PF02830 V4R domain THIVI_RS11615 PF06969 HemN C-terminal domain THIVI_RS11615 PF04055 Radical SAM superfamily THIVI_RS11620 PF02310 B12 binding domain THIVI_RS11620 PF04055 Radical SAM superfamily THIVI_RS11625 PF12291 Protein of unknown function (DUF3623) THIVI_RS11640 PF03967 Photosynthetic reaction centre, H-chain N-terminal region THIVI_RS11640 PF05239 PRC-barrel domain THIVI_RS11645 PF05175 Methyltransferase small domain THIVI_RS11645 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus THIVI_RS11650 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family THIVI_RS11655 PF02514 CobN/Magnesium Chelatase THIVI_RS11655 PF11965 Domain of unknown function (DUF3479) THIVI_RS11660 PF00148 Nitrogenase component 1 type Oxidoreductase THIVI_RS11660 PF08369 Proto-chlorophyllide reductase 57 kD subunit THIVI_RS11665 PF00148 Nitrogenase component 1 type Oxidoreductase THIVI_RS11670 PF07284 2-vinyl bacteriochlorophyllide hydratase (BCHF) THIVI_RS11675 PF13426 PAS domain THIVI_RS11675 PF13188 PAS domain THIVI_RS11675 PF02954 Bacterial regulatory protein, Fis family THIVI_RS11680 PF01040 UbiA prenyltransferase family THIVI_RS11690 PF04408 Helicase associated domain (HA2) THIVI_RS11690 PF00271 Helicase conserved C-terminal domain THIVI_RS11690 PF08482 ATP-dependent helicase C-terminal THIVI_RS11690 PF00270 DEAD/DEAH box helicase THIVI_RS11710 PF00391 PEP-utilising enzyme, mobile domain THIVI_RS11710 PF02887 Pyruvate kinase, alpha/beta domain THIVI_RS11710 PF00224 Pyruvate kinase, barrel domain THIVI_RS11730 PF01695 IstB-like ATP binding protein THIVI_RS11740 PF00665 Integrase core domain THIVI_RS11770 PF00749 tRNA synthetases class I (E and Q), catalytic domain THIVI_RS11770 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain THIVI_RS11790 PF00905 Penicillin binding protein transpeptidase domain THIVI_RS11795 PF13378 Enolase C-terminal domain-like THIVI_RS11805 PF00378 Enoyl-CoA hydratase/isomerase THIVI_RS11810 PF01471 Putative peptidoglycan binding domain THIVI_RS11810 PF13401 AAA domain THIVI_RS11820 PF01769 Divalent cation transporter THIVI_RS11820 PF03448 MgtE intracellular N domain THIVI_RS11820 PF00571 CBS domain THIVI_RS11825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS11825 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS11825 PF00989 PAS fold THIVI_RS11830 PF02954 Bacterial regulatory protein, Fis family THIVI_RS11830 PF00158 Sigma-54 interaction domain THIVI_RS11830 PF00072 Response regulator receiver domain THIVI_RS11840 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS11840 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS11840 PF00563 EAL domain THIVI_RS11855 PF06480 FtsH Extracellular THIVI_RS11855 PF17862 AAA+ lid domain THIVI_RS11855 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS11855 PF01434 Peptidase family M41 THIVI_RS11865 PF03781 Sulfatase-modifying factor enzyme 1 THIVI_RS11880 PF00563 EAL domain THIVI_RS11880 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS11880 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS11885 PF01966 HD domain THIVI_RS11905 PF04012 PspA/IM30 family THIVI_RS11915 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP THIVI_RS11915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III THIVI_RS11940 PF00664 ABC transporter transmembrane region THIVI_RS11940 PF00005 ABC transporter THIVI_RS11945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS11945 PF07730 Histidine kinase THIVI_RS11945 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term THIVI_RS11945 PF00672 HAMP domain THIVI_RS11950 PF00196 Bacterial regulatory proteins, luxR family THIVI_RS11950 PF00072 Response regulator receiver domain THIVI_RS11970 PF00436 Single-strand binding protein family THIVI_RS11975 PF07690 Major Facilitator Superfamily THIVI_RS11980 PF00005 ABC transporter THIVI_RS11980 PF17755 UvrA DNA-binding domain THIVI_RS11980 PF17760 UvrA interaction domain THIVI_RS11995 PF01580 FtsK/SpoIIIE family THIVI_RS11995 PF17854 FtsK alpha domain THIVI_RS11995 PF09397 Ftsk gamma domain THIVI_RS11995 PF13491 4TM region of DNA translocase FtsK/SpoIIIE THIVI_RS12020 PF13439 Glycosyltransferase Family 4 THIVI_RS12020 PF00534 Glycosyl transferases group 1 THIVI_RS12025 PF13439 Glycosyltransferase Family 4 THIVI_RS12025 PF00534 Glycosyl transferases group 1 THIVI_RS12070 PF00665 Integrase core domain THIVI_RS12070 PF13276 HTH-like domain THIVI_RS12070 PF13333 Integrase core domain THIVI_RS12085 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system THIVI_RS12105 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit THIVI_RS12110 PF00364 Biotin-requiring enzyme THIVI_RS12110 PF02436 Conserved carboxylase domain THIVI_RS12110 PF00682 HMGL-like THIVI_RS12120 PF06832 Penicillin-Binding Protein C-terminus Family THIVI_RS12120 PF00905 Penicillin binding protein transpeptidase domain THIVI_RS12120 PF00912 Transglycosylase THIVI_RS12125 PF00593 TonB dependent receptor THIVI_RS12125 PF07715 TonB-dependent Receptor Plug Domain THIVI_RS12135 PF17151 Periplasmic sensor domain THIVI_RS12135 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS12140 PF07497 Rho termination factor, RNA-binding domain THIVI_RS12140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THIVI_RS12140 PF07498 Rho termination factor, N-terminal domain THIVI_RS12145 PF00085 Thioredoxin THIVI_RS12150 PF00271 Helicase conserved C-terminal domain THIVI_RS12150 PF00270 DEAD/DEAH box helicase THIVI_RS12150 PF12300 ATP-dependent RNA helicase RhlB THIVI_RS12155 PF13419 Haloacid dehalogenase-like hydrolase THIVI_RS12160 PF00293 NUDIX domain THIVI_RS12170 PF00390 Malic enzyme, N-terminal domain THIVI_RS12170 PF03949 Malic enzyme, NAD binding domain THIVI_RS12175 PF03471 Transporter associated domain THIVI_RS12175 PF00571 CBS domain THIVI_RS12175 PF01595 Cyclin M transmembrane N-terminal domain THIVI_RS12180 PF04381 Putative exonuclease, RdgC THIVI_RS12185 PF01370 NAD dependent epimerase/dehydratase family THIVI_RS12190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THIVI_RS12195 PF01297 Zinc-uptake complex component A periplasmic THIVI_RS12205 PF00005 ABC transporter THIVI_RS12210 PF01297 Zinc-uptake complex component A periplasmic THIVI_RS12225 PF00005 ABC transporter THIVI_RS12225 PF03459 TOBE domain THIVI_RS12230 PF00528 Binding-protein-dependent transport system inner membrane component THIVI_RS12240 PF03459 TOBE domain THIVI_RS12240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THIVI_RS12250 PF03459 TOBE domain THIVI_RS12250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THIVI_RS12255 PF02600 Disulfide bond formation protein DsbB THIVI_RS12265 PF02537 CrcB-like protein, Camphor Resistance (CrcB) THIVI_RS12270 PF04193 PQ loop repeat THIVI_RS12275 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase THIVI_RS12280 PF01502 Phosphoribosyl-AMP cyclohydrolase THIVI_RS12285 PF00977 Histidine biosynthesis protein THIVI_RS12290 PF00475 Imidazoleglycerol-phosphate dehydratase THIVI_RS12305 PF00534 Glycosyl transferases group 1 THIVI_RS12305 PF13439 Glycosyltransferase Family 4 THIVI_RS12310 PF03949 Malic enzyme, NAD binding domain THIVI_RS12310 PF01515 Phosphate acetyl/butaryl transferase THIVI_RS12310 PF00390 Malic enzyme, N-terminal domain THIVI_RS12315 PF02254 TrkA-N domain THIVI_RS12315 PF02080 TrkA-C domain THIVI_RS12320 PF02386 Cation transport protein THIVI_RS12325 PF00696 Amino acid kinase family THIVI_RS12325 PF01472 PUA domain THIVI_RS12330 PF01926 50S ribosome-binding GTPase THIVI_RS12330 PF01018 GTP1/OBG THIVI_RS12335 PF01016 Ribosomal L27 protein THIVI_RS12340 PF00829 Ribosomal prokaryotic L21 protein THIVI_RS12345 PF00348 Polyprenyl synthetase THIVI_RS12360 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS12360 PF00563 EAL domain THIVI_RS12360 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS12370 PF09363 XFP C-terminal domain THIVI_RS12370 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase THIVI_RS12370 PF09364 XFP N-terminal domain THIVI_RS12375 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS12375 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS12375 PF00563 EAL domain THIVI_RS12400 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain THIVI_RS12400 PF10091 Putative glucoamylase THIVI_RS12400 PF06165 Glycosyltransferase family 36 THIVI_RS12405 PF04972 BON domain THIVI_RS12410 PF04972 BON domain THIVI_RS12445 PF17200 Single Cache domain 2 THIVI_RS12445 PF00672 HAMP domain THIVI_RS12445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS12465 PF00085 Thioredoxin THIVI_RS12470 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS12470 PF00072 Response regulator receiver domain THIVI_RS12470 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS12470 PF01627 Hpt domain THIVI_RS12470 PF00672 HAMP domain THIVI_RS12470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS12475 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS12475 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS12475 PF00563 EAL domain THIVI_RS12480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS12480 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS12480 PF00072 Response regulator receiver domain THIVI_RS12480 PF09308 LuxQ, periplasmic THIVI_RS12485 PF01739 CheR methyltransferase, SAM binding domain THIVI_RS12485 PF03705 CheR methyltransferase, all-alpha domain THIVI_RS12485 PF08448 PAS fold THIVI_RS12485 PF01339 CheB methylesterase THIVI_RS12510 PF03330 Lytic transglycolase THIVI_RS12510 PF05036 Sporulation related domain THIVI_RS12525 PF00005 ABC transporter THIVI_RS12530 PF02597 ThiS family THIVI_RS12535 PF00994 Probable molybdopterin binding domain THIVI_RS12535 PF03454 MoeA C-terminal region (domain IV) THIVI_RS12535 PF03453 MoeA N-terminal region (domain I and II) THIVI_RS12540 PF00994 Probable molybdopterin binding domain THIVI_RS12545 PF12804 MobA-like NTP transferase domain THIVI_RS12545 PF00132 Bacterial transferase hexapeptide (six repeats) THIVI_RS12550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THIVI_RS12555 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain THIVI_RS12555 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain THIVI_RS12560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THIVI_RS12560 PF02874 ATP synthase alpha/beta family, beta-barrel domain THIVI_RS12565 PF00231 ATP synthase THIVI_RS12570 PF02874 ATP synthase alpha/beta family, beta-barrel domain THIVI_RS12570 PF00306 ATP synthase alpha/beta chain, C terminal domain THIVI_RS12570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THIVI_RS12575 PF00213 ATP synthase delta (OSCP) subunit THIVI_RS12580 PF00430 ATP synthase B/B' CF(0) THIVI_RS12585 PF00137 ATP synthase subunit C THIVI_RS12590 PF00119 ATP synthase A chain THIVI_RS12600 PF17762 HTH domain found in ParB protein THIVI_RS12600 PF02195 ParB-like nuclease domain THIVI_RS12605 PF13614 AAA domain THIVI_RS12610 PF02527 rRNA small subunit methyltransferase G THIVI_RS12615 PF13932 GidA associated domain THIVI_RS12615 PF01134 Glucose inhibited division protein A THIVI_RS12620 PF07726 ATPase family associated with various cellular activities (AAA) THIVI_RS12620 PF17863 AAA lid domain THIVI_RS12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS12625 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS12625 PF09308 LuxQ, periplasmic THIVI_RS12625 PF00072 Response regulator receiver domain THIVI_RS12635 PF00155 Aminotransferase class I and II THIVI_RS12645 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal THIVI_RS12645 PF00132 Bacterial transferase hexapeptide (six repeats) THIVI_RS12645 PF14602 Hexapeptide repeat of succinyl-transferase THIVI_RS12650 PF03960 ArsC family THIVI_RS12655 PF07687 Peptidase dimerisation domain THIVI_RS12655 PF01546 Peptidase family M20/M25/M40 THIVI_RS12675 PF13580 SIS domain THIVI_RS12690 PF17757 UvrB interaction domain THIVI_RS12690 PF00271 Helicase conserved C-terminal domain THIVI_RS12690 PF04851 Type III restriction enzyme, res subunit THIVI_RS12690 PF02151 UvrB/uvrC motif THIVI_RS12690 PF12344 Ultra-violet resistance protein B THIVI_RS12695 PF00155 Aminotransferase class I and II THIVI_RS12710 PF00005 ABC transporter THIVI_RS12715 PF01061 ABC-2 type transporter THIVI_RS12740 PF06071 Protein of unknown function (DUF933) THIVI_RS12740 PF01926 50S ribosome-binding GTPase THIVI_RS12745 PF00483 Nucleotidyl transferase THIVI_RS12745 PF01050 Mannose-6-phosphate isomerase THIVI_RS12750 PF00459 Inositol monophosphatase family THIVI_RS12760 PF13439 Glycosyltransferase Family 4 THIVI_RS12760 PF00534 Glycosyl transferases group 1 THIVI_RS12770 PF00665 Integrase core domain THIVI_RS12780 PF01695 IstB-like ATP binding protein THIVI_RS12890 PF13276 HTH-like domain THIVI_RS12890 PF00665 Integrase core domain THIVI_RS12890 PF13333 Integrase core domain THIVI_RS12950 PF00764 Arginosuccinate synthase THIVI_RS12955 PF18073 Rubredoxin metal binding domain THIVI_RS13010 PF00005 ABC transporter THIVI_RS13030 PF08241 Methyltransferase domain THIVI_RS13035 PF01757 Acyltransferase family THIVI_RS13040 PF00535 Glycosyl transferase family 2 THIVI_RS13045 PF00535 Glycosyl transferase family 2 THIVI_RS13050 PF13460 NAD(P)H-binding THIVI_RS13050 PF11066 Protein of unknown function (DUF2867) THIVI_RS13060 PF02492 CobW/HypB/UreG, nucleotide-binding domain THIVI_RS13075 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA THIVI_RS13085 PF17944 Arginine decarboxylase C-terminal helical extension THIVI_RS13085 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THIVI_RS13085 PF17810 Arginine decarboxylase helical bundle domain THIVI_RS13090 PF00230 Major intrinsic protein THIVI_RS13095 PF04358 DsrC like protein THIVI_RS13110 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THIVI_RS13110 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal THIVI_RS13125 PF00374 Nickel-dependent hydrogenase THIVI_RS13130 PF01098 Cell cycle protein THIVI_RS13135 PF00149 Calcineurin-like phosphoesterase THIVI_RS13145 PF07690 Major Facilitator Superfamily THIVI_RS13150 PF00563 EAL domain THIVI_RS13150 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS13150 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS13155 PF03776 Septum formation topological specificity factor MinE THIVI_RS13160 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THIVI_RS13165 PF03775 Septum formation inhibitor MinC, C-terminal domain THIVI_RS13165 PF05209 Septum formation inhibitor MinC, N-terminal domain THIVI_RS13170 PF01230 HIT domain THIVI_RS13175 PF02132 RecR protein THIVI_RS13175 PF13662 Toprim domain THIVI_RS13180 PF02575 YbaB/EbfC DNA-binding family THIVI_RS13185 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding THIVI_RS13185 PF12170 DNA polymerase III tau subunit V interacting with alpha THIVI_RS13185 PF12169 DNA polymerase III subunits gamma and tau domain III THIVI_RS13190 PF00696 Amino acid kinase family THIVI_RS13195 PF00313 'Cold-shock' DNA-binding domain THIVI_RS13200 PF00692 dUTPase THIVI_RS13205 PF02441 Flavoprotein THIVI_RS13205 PF04127 DNA / pantothenate metabolism flavoprotein THIVI_RS13210 PF04002 RadC-like JAB domain THIVI_RS13215 PF05872 Bacterial protein of unknown function (DUF853) THIVI_RS13225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD THIVI_RS13235 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal THIVI_RS13235 PF01926 50S ribosome-binding GTPase THIVI_RS13240 PF13360 PQQ-like domain THIVI_RS13245 PF09976 Tetratricopeptide repeat-like domain THIVI_RS13250 PF03129 Anticodon binding domain THIVI_RS13250 PF13393 Histidyl-tRNA synthetase THIVI_RS13265 PF04055 Radical SAM superfamily THIVI_RS13270 PF00334 Nucleoside diphosphate kinase THIVI_RS13285 PF12838 4Fe-4S dicluster domain THIVI_RS13295 PF03270 Protein of unknown function, DUF269 THIVI_RS13305 PF02579 Dinitrogenase iron-molybdenum cofactor THIVI_RS13310 PF00148 Nitrogenase component 1 type Oxidoreductase THIVI_RS13315 PF00148 Nitrogenase component 1 type Oxidoreductase THIVI_RS13320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THIVI_RS13320 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS13330 PF01842 ACT domain THIVI_RS13330 PF08335 GlnD PII-uridylyltransferase THIVI_RS13330 PF01909 Nucleotidyltransferase domain THIVI_RS13330 PF01966 HD domain THIVI_RS13335 PF00557 Metallopeptidase family M24 THIVI_RS13340 PF00318 Ribosomal protein S2 THIVI_RS13345 PF00889 Elongation factor TS THIVI_RS13350 PF00696 Amino acid kinase family THIVI_RS13355 PF01765 Ribosome recycling factor THIVI_RS13360 PF01255 Putative undecaprenyl diphosphate synthase THIVI_RS13370 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain THIVI_RS13370 PF13288 DXP reductoisomerase C-terminal domain THIVI_RS13370 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase THIVI_RS13375 PF02163 Peptidase family M50 THIVI_RS13375 PF17820 PDZ domain THIVI_RS13375 PF13180 PDZ domain THIVI_RS13380 PF01103 Surface antigen THIVI_RS13380 PF07244 Surface antigen variable number repeat THIVI_RS13390 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD THIVI_RS13390 PF00132 Bacterial transferase hexapeptide (six repeats) THIVI_RS13395 PF07977 FabA-like domain THIVI_RS13400 PF00132 Bacterial transferase hexapeptide (six repeats) THIVI_RS13400 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 THIVI_RS13405 PF02684 Lipid-A-disaccharide synthetase THIVI_RS13410 PF01351 Ribonuclease HII THIVI_RS13420 PF00437 Type II/IV secretion system protein THIVI_RS13420 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain THIVI_RS13445 PF00873 AcrB/AcrD/AcrF family THIVI_RS13450 PF13533 Biotin-lipoyl like THIVI_RS13460 PF00111 2Fe-2S iron-sulfur cluster binding domain THIVI_RS13460 PF01799 [2Fe-2S] binding domain THIVI_RS13465 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase THIVI_RS13475 PF00793 DAHP synthetase I family THIVI_RS13495 PF13085 2Fe-2S iron-sulfur cluster binding domain THIVI_RS13495 PF13183 4Fe-4S dicluster domain THIVI_RS13500 PF02910 Fumarate reductase flavoprotein C-term THIVI_RS13500 PF00890 FAD binding domain THIVI_RS13505 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit THIVI_RS13515 PF02381 MraZ protein, putative antitoxin-like THIVI_RS13520 PF01636 Phosphotransferase enzyme family THIVI_RS13525 PF02719 Polysaccharide biosynthesis protein THIVI_RS13530 PF00953 Glycosyl transferase family 4 THIVI_RS13535 PF01965 DJ-1/PfpI family THIVI_RS13540 PF03572 Peptidase family S41 THIVI_RS13540 PF13180 PDZ domain THIVI_RS13545 PF01551 Peptidase family M23 THIVI_RS13555 PF17773 UPF0176 acylphosphatase like domain THIVI_RS13555 PF12368 Rhodanase C-terminal THIVI_RS13555 PF00581 Rhodanese-like domain THIVI_RS13560 PF02556 Preprotein translocase subunit SecB THIVI_RS13565 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus THIVI_RS13565 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus THIVI_RS13570 PF00588 SpoU rRNA Methylase family THIVI_RS13585 PF00072 Response regulator receiver domain THIVI_RS13585 PF02954 Bacterial regulatory protein, Fis family THIVI_RS13585 PF00158 Sigma-54 interaction domain THIVI_RS13590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS13590 PF00989 PAS fold THIVI_RS13590 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS13600 PF00120 Glutamine synthetase, catalytic domain THIVI_RS13600 PF03951 Glutamine synthetase, beta-Grasp domain THIVI_RS13605 PF00873 AcrB/AcrD/AcrF family THIVI_RS13610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THIVI_RS13620 PF00873 AcrB/AcrD/AcrF family THIVI_RS13625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THIVI_RS13625 PF00529 HlyD membrane-fusion protein of T1SS THIVI_RS13630 PF07728 AAA domain (dynein-related subfamily) THIVI_RS13630 PF08406 CbbQ/NirQ/NorQ C-terminal THIVI_RS13645 PF00311 Phosphoenolpyruvate carboxylase THIVI_RS13660 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin THIVI_RS13665 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) THIVI_RS13670 PF07690 Major Facilitator Superfamily THIVI_RS13705 PF00403 Heavy-metal-associated domain THIVI_RS13725 PF02464 Competence-damaged protein THIVI_RS13725 PF00994 Probable molybdopterin binding domain THIVI_RS13725 PF18146 Damage-inducible protein CinA KH domain THIVI_RS13735 PF00482 Type II secretion system (T2SS), protein F THIVI_RS13745 PF05746 DALR anticodon binding domain THIVI_RS13745 PF02092 Glycyl-tRNA synthetase beta subunit THIVI_RS13750 PF02091 Glycyl-tRNA synthetase alpha subunit THIVI_RS13755 PF05981 CreA protein THIVI_RS13770 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS13785 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS13785 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS13785 PF00563 EAL domain THIVI_RS13790 PF00712 DNA polymerase III beta subunit, N-terminal domain THIVI_RS13790 PF02767 DNA polymerase III beta subunit, central domain THIVI_RS13790 PF02768 DNA polymerase III beta subunit, C-terminal domain THIVI_RS13805 PF13361 UvrD-like helicase C-terminal domain THIVI_RS13805 PF00580 UvrD/REP helicase N-terminal domain THIVI_RS13810 PF00575 S1 RNA binding domain THIVI_RS13815 PF06969 HemN C-terminal domain THIVI_RS13815 PF04055 Radical SAM superfamily THIVI_RS13820 PF01197 Ribosomal protein L31 THIVI_RS13825 PF00056 lactate/malate dehydrogenase, NAD binding domain THIVI_RS13825 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain THIVI_RS13830 PF00285 Citrate synthase, C-terminal domain THIVI_RS13840 PF11104 Type IV pilus assembly protein PilM; THIVI_RS13850 PF04350 Pilus assembly protein, PilO THIVI_RS13855 PF04351 Pilus assembly protein, PilP THIVI_RS13860 PF03958 Bacterial type II/III secretion system short domain THIVI_RS13860 PF00263 Bacterial type II and III secretion system protein THIVI_RS13860 PF07660 Secretin and TonB N terminus short domain THIVI_RS13860 PF11741 AMIN domain THIVI_RS13870 PF01202 Shikimate kinase THIVI_RS13875 PF01761 3-dehydroquinate synthase THIVI_RS13880 PF01645 Conserved region in glutamate synthase THIVI_RS13880 PF01493 GXGXG motif THIVI_RS13880 PF00310 Glutamine amidotransferases class-II THIVI_RS13880 PF04898 Glutamate synthase central domain THIVI_RS13885 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THIVI_RS13885 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS13895 PF00437 Type II/IV secretion system protein THIVI_RS13900 PF00437 Type II/IV secretion system protein THIVI_RS13905 PF00263 Bacterial type II and III secretion system protein THIVI_RS13905 PF03958 Bacterial type II/III secretion system short domain THIVI_RS13920 PF05137 Fimbrial assembly protein (PilN) THIVI_RS13925 PF03934 Type II secretion system (T2SS), protein K THIVI_RS13935 PF07963 Prokaryotic N-terminal methylation motif THIVI_RS13945 PF07963 Prokaryotic N-terminal methylation motif THIVI_RS13945 PF08334 Type II secretion system (T2SS), protein G THIVI_RS13950 PF02384 N-6 DNA Methylase THIVI_RS13950 PF12161 HsdM N-terminal domain THIVI_RS13995 PF18766 SWI2/SNF2 ATPase THIVI_RS13995 PF12008 Type I restriction and modification enzyme - subunit R C terminal THIVI_RS13995 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) THIVI_RS14025 PF01139 tRNA-splicing ligase RtcB THIVI_RS14040 PF05362 Lon protease (S16) C-terminal proteolytic domain THIVI_RS14040 PF02190 ATP-dependent protease La (LON) substrate-binding domain THIVI_RS14040 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS14050 PF01208 Uroporphyrinogen decarboxylase (URO-D) THIVI_RS14055 PF03649 Uncharacterised protein family (UPF0014) THIVI_RS14060 PF00005 ABC transporter THIVI_RS14060 PF08402 TOBE domain THIVI_RS14065 PF02390 Putative methyltransferase THIVI_RS14070 PF05690 Thiazole biosynthesis protein ThiG THIVI_RS14080 PF00483 Nucleotidyl transferase THIVI_RS14085 PF00128 Alpha amylase, catalytic domain THIVI_RS14085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THIVI_RS14085 PF02806 Alpha amylase, C-terminal all-beta domain THIVI_RS14095 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 THIVI_RS14105 PF02391 MoaE protein THIVI_RS14110 PF01751 Toprim domain THIVI_RS14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS14110 PF18053 DNA gyrase B subunit insert domain THIVI_RS14110 PF00986 DNA gyrase B subunit, carboxyl terminus THIVI_RS14110 PF00204 DNA gyrase B THIVI_RS14120 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THIVI_RS14125 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THIVI_RS14130 PF00361 Proton-conducting membrane transporter THIVI_RS14140 PF00146 NADH dehydrogenase THIVI_RS14145 PF00361 Proton-conducting membrane transporter THIVI_RS14155 PF17284 Spermidine synthase tetramerisation domain THIVI_RS14185 PF00092 von Willebrand factor type A domain THIVI_RS14190 PF03741 Integral membrane protein TerC family THIVI_RS14230 PF00398 Ribosomal RNA adenine dimethylase THIVI_RS14235 PF00923 Transaldolase/Fructose-6-phosphate aldolase THIVI_RS14300 PF07508 Recombinase THIVI_RS14300 PF13408 Recombinase zinc beta ribbon domain THIVI_RS14300 PF00239 Resolvase, N terminal domain THIVI_RS14305 PF01548 Transposase THIVI_RS14305 PF02371 Transposase IS116/IS110/IS902 family THIVI_RS14340 PF00239 Resolvase, N terminal domain THIVI_RS14340 PF07508 Recombinase THIVI_RS14340 PF13408 Recombinase zinc beta ribbon domain THIVI_RS14360 PF03334 Na+/H+ antiporter subunit THIVI_RS14365 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) THIVI_RS14375 PF00361 Proton-conducting membrane transporter THIVI_RS14380 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L THIVI_RS14385 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THIVI_RS14385 PF00361 Proton-conducting membrane transporter THIVI_RS14385 PF13244 Domain of unknown function (DUF4040) THIVI_RS14385 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter THIVI_RS14405 PF13808 DDE_Tnp_1-associated THIVI_RS14405 PF01609 Transposase DDE domain THIVI_RS14425 PF17969 L,D-transpeptidase C-terminal domain THIVI_RS14425 PF03734 L,D-transpeptidase catalytic domain THIVI_RS14430 PF00679 Elongation factor G C-terminus THIVI_RS14430 PF03764 Elongation factor G, domain IV THIVI_RS14430 PF03144 Elongation factor Tu domain 2 THIVI_RS14430 PF00009 Elongation factor Tu GTP binding domain THIVI_RS14430 PF14492 Elongation Factor G, domain II THIVI_RS14435 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS14440 PF00484 Carbonic anhydrase THIVI_RS14450 PF02630 SCO1/SenC THIVI_RS14460 PF13442 Cytochrome C oxidase, cbb3-type, subunit III THIVI_RS14485 PF18075 FtsX extracellular domain THIVI_RS14490 PF00005 ABC transporter THIVI_RS14495 PF00448 SRP54-type protein, GTPase domain THIVI_RS14495 PF02881 SRP54-type protein, helical bundle domain THIVI_RS14500 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS14500 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS14500 PF00563 EAL domain THIVI_RS14505 PF01339 CheB methylesterase THIVI_RS14505 PF01739 CheR methyltransferase, SAM binding domain THIVI_RS14505 PF08448 PAS fold THIVI_RS14505 PF03705 CheR methyltransferase, all-alpha domain THIVI_RS14510 PF00571 CBS domain THIVI_RS14510 PF03471 Transporter associated domain THIVI_RS14510 PF01595 Cyclin M transmembrane N-terminal domain THIVI_RS14515 PF00571 CBS domain THIVI_RS14515 PF03471 Transporter associated domain THIVI_RS14515 PF01595 Cyclin M transmembrane N-terminal domain THIVI_RS14520 PF00535 Glycosyl transferase family 2 THIVI_RS14520 PF07238 PilZ domain THIVI_RS14535 PF00037 4Fe-4S binding domain THIVI_RS14540 PF01467 Cytidylyltransferase-like THIVI_RS14555 PF00675 Insulinase (Peptidase family M16) THIVI_RS14555 PF05193 Peptidase M16 inactive domain THIVI_RS14560 PF00675 Insulinase (Peptidase family M16) THIVI_RS14560 PF05193 Peptidase M16 inactive domain THIVI_RS14575 PF00437 Type II/IV secretion system protein THIVI_RS14575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain THIVI_RS14580 PF01180 Dihydroorotate dehydrogenase THIVI_RS14590 PF02096 60Kd inner membrane protein THIVI_RS14590 PF14849 YidC periplasmic domain THIVI_RS14595 PF10396 GTP-binding protein TrmE N-terminus THIVI_RS14595 PF12631 MnmE helical domain THIVI_RS14595 PF01926 50S ribosome-binding GTPase THIVI_RS14625 PF12729 Four helix bundle sensory module for signal transduction THIVI_RS14625 PF00672 HAMP domain THIVI_RS14625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS14630 PF01609 Transposase DDE domain THIVI_RS14630 PF13808 DDE_Tnp_1-associated THIVI_RS14670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily THIVI_RS14680 PF00905 Penicillin binding protein transpeptidase domain THIVI_RS14690 PF06167 Glucose-regulated metallo-peptidase M90 THIVI_RS14700 PF17954 Quercetinase C-terminal cupin domain THIVI_RS14700 PF02678 Pirin THIVI_RS14705 PF00106 short chain dehydrogenase THIVI_RS14730 PF03600 Citrate transporter THIVI_RS14730 PF02080 TrkA-C domain THIVI_RS14735 PF10609 NUBPL iron-transfer P-loop NTPase THIVI_RS14740 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS14740 PF13188 PAS domain THIVI_RS14740 PF00563 EAL domain THIVI_RS14740 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS14745 PF00692 dUTPase THIVI_RS14760 PF13439 Glycosyltransferase Family 4 THIVI_RS14760 PF00534 Glycosyl transferases group 1 THIVI_RS14775 PF00528 Binding-protein-dependent transport system inner membrane component THIVI_RS14780 PF00528 Binding-protein-dependent transport system inner membrane component THIVI_RS14785 PF00005 ABC transporter THIVI_RS14790 PF01895 PhoU domain THIVI_RS14800 PF16123 Hydroxyacylglutathione hydrolase C-terminus THIVI_RS14800 PF00753 Metallo-beta-lactamase superfamily THIVI_RS14805 PF00391 PEP-utilising enzyme, mobile domain THIVI_RS14805 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain THIVI_RS14805 PF02896 PEP-utilising enzyme, TIM barrel domain THIVI_RS14815 PF00535 Glycosyl transferase family 2 THIVI_RS14835 PF01578 Cytochrome C assembly protein THIVI_RS14845 PF03379 CcmB protein THIVI_RS14850 PF00005 ABC transporter THIVI_RS14860 PF03918 Cytochrome C biogenesis protein THIVI_RS14865 PF08534 Redoxin THIVI_RS14870 PF01578 Cytochrome C assembly protein THIVI_RS14870 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal THIVI_RS14875 PF03100 CcmE THIVI_RS14880 PF02586 SOS response associated peptidase (SRAP) THIVI_RS14885 PF00581 Rhodanese-like domain THIVI_RS14890 PF00708 Acylphosphatase THIVI_RS14890 PF17788 HypF Kae1-like domain THIVI_RS14890 PF07503 HypF finger THIVI_RS14890 PF01300 Telomere recombination THIVI_RS14895 PF01625 Peptide methionine sulfoxide reductase THIVI_RS14910 PF00501 AMP-binding enzyme THIVI_RS14910 PF13193 AMP-binding enzyme C-terminal domain THIVI_RS14910 PF16177 Acetyl-coenzyme A synthetase N-terminus THIVI_RS14915 PF00202 Aminotransferase class-III THIVI_RS14920 PF02581 Thiamine monophosphate synthase THIVI_RS14925 PF08543 Phosphomethylpyrimidine kinase THIVI_RS14930 PF00301 Rubredoxin THIVI_RS14940 PF01521 Iron-sulphur cluster biosynthesis THIVI_RS14945 PF01118 Semialdehyde dehydrogenase, NAD binding domain THIVI_RS14945 PF02774 Semialdehyde dehydrogenase, dimerisation domain THIVI_RS14950 PF01521 Iron-sulphur cluster biosynthesis THIVI_RS14960 PF00579 tRNA synthetases class I (W and Y) THIVI_RS14970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase THIVI_RS14970 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain THIVI_RS14975 PF01488 Shikimate / quinate 5-dehydrogenase THIVI_RS14975 PF08501 Shikimate dehydrogenase substrate binding domain THIVI_RS14975 PF18317 Shikimate 5'-dehydrogenase C-terminal domain THIVI_RS14980 PF00490 Delta-aminolevulinic acid dehydratase THIVI_RS14985 PF00425 chorismate binding enzyme THIVI_RS14985 PF04715 Anthranilate synthase component I, N terminal region THIVI_RS14990 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS14990 PF17862 AAA+ lid domain THIVI_RS14990 PF01434 Peptidase family M41 THIVI_RS14990 PF06480 FtsH Extracellular THIVI_RS14995 PF01556 DnaJ C terminal domain THIVI_RS14995 PF00226 DnaJ domain THIVI_RS15005 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain THIVI_RS15005 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain THIVI_RS15010 PF01510 N-acetylmuramoyl-L-alanine amidase THIVI_RS15020 PF00873 AcrB/AcrD/AcrF family THIVI_RS15025 PF01555 DNA methylase THIVI_RS15060 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system THIVI_RS15070 PF02754 Cysteine-rich domain THIVI_RS15085 PF01593 Flavin containing amine oxidoreductase THIVI_RS15090 PF01068 ATP dependent DNA ligase domain THIVI_RS15090 PF14743 DNA ligase OB-like domain THIVI_RS15095 PF05724 Thiopurine S-methyltransferase (TPMT) THIVI_RS15100 PF00317 Ribonucleotide reductase, all-alpha domain THIVI_RS15100 PF02867 Ribonucleotide reductase, barrel domain THIVI_RS15100 PF03477 ATP cone domain THIVI_RS15115 PF05724 Thiopurine S-methyltransferase (TPMT) THIVI_RS15120 PF02623 FliW protein THIVI_RS15125 PF00456 Transketolase, thiamine diphosphate binding domain THIVI_RS15130 PF02780 Transketolase, C-terminal domain THIVI_RS15130 PF02779 Transketolase, pyrimidine binding domain THIVI_RS15140 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain THIVI_RS15145 PF02699 Preprotein translocase subunit THIVI_RS15150 PF07549 SecD/SecF GG Motif THIVI_RS15150 PF13721 SecD export protein N-terminal TM region THIVI_RS15150 PF02355 Protein export membrane protein THIVI_RS15155 PF02355 Protein export membrane protein THIVI_RS15155 PF07549 SecD/SecF GG Motif THIVI_RS15170 PF13472 GDSL-like Lipase/Acylhydrolase family THIVI_RS15175 PF00005 ABC transporter THIVI_RS15195 PF09967 VWA-like domain (DUF2201) THIVI_RS15195 PF13203 Putative metallopeptidase domain THIVI_RS15200 PF01435 Peptidase family M48 THIVI_RS15225 PF02082 Transcriptional regulator THIVI_RS15230 PF00132 Bacterial transferase hexapeptide (six repeats) THIVI_RS15235 PF01555 DNA methylase THIVI_RS15255 PF00588 SpoU rRNA Methylase family THIVI_RS15260 PF00459 Inositol monophosphatase family THIVI_RS15265 PF00669 Bacterial flagellin N-terminal helical region THIVI_RS15265 PF00700 Bacterial flagellin C-terminal helical region THIVI_RS15290 PF07669 Eco57I restriction-modification methylase THIVI_RS15290 PF12950 TaqI-like C-terminal specificity domain THIVI_RS15295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THIVI_RS15295 PF16582 Middle domain of thiamine pyrophosphate THIVI_RS15295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THIVI_RS15300 PF00425 chorismate binding enzyme THIVI_RS15310 PF13460 NAD(P)H-binding THIVI_RS15310 PF11066 Protein of unknown function (DUF2867) THIVI_RS15320 PF12729 Four helix bundle sensory module for signal transduction THIVI_RS15320 PF00672 HAMP domain THIVI_RS15320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS15325 PF00933 Glycosyl hydrolase family 3 N terminal domain THIVI_RS15330 PF00156 Phosphoribosyl transferase domain THIVI_RS15340 PF01048 Phosphorylase superfamily THIVI_RS15350 PF17384 RimP C-terminal SH3 domain THIVI_RS15350 PF02576 RimP N-terminal domain THIVI_RS15355 PF08529 NusA N-terminal domain THIVI_RS15355 PF13184 NusA-like KH domain THIVI_RS15355 PF00575 S1 RNA binding domain THIVI_RS15360 PF00009 Elongation factor Tu GTP binding domain THIVI_RS15360 PF03144 Elongation factor Tu domain 2 THIVI_RS15360 PF11987 Translation-initiation factor 2 THIVI_RS15360 PF04760 Translation initiation factor IF-2, N-terminal region THIVI_RS15360 PF08364 Bacterial translation initiation factor IF-2 associated region THIVI_RS15365 PF02033 Ribosome-binding factor A THIVI_RS15370 PF16198 tRNA pseudouridylate synthase B C-terminal domain THIVI_RS15370 PF01509 TruB family pseudouridylate synthase (N terminal domain) THIVI_RS15370 PF09157 Pseudouridine synthase II TruB, C-terminal THIVI_RS15375 PF00312 Ribosomal protein S15 THIVI_RS15380 PF00013 KH domain THIVI_RS15380 PF03725 3' exoribonuclease family, domain 2 THIVI_RS15380 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain THIVI_RS15380 PF01138 3' exoribonuclease family, domain 1 THIVI_RS15380 PF00575 S1 RNA binding domain THIVI_RS15385 PF00528 Binding-protein-dependent transport system inner membrane component THIVI_RS15390 PF00528 Binding-protein-dependent transport system inner membrane component THIVI_RS15395 PF08402 TOBE domain THIVI_RS15395 PF00005 ABC transporter THIVI_RS15400 PF13416 Bacterial extracellular solute-binding protein THIVI_RS15405 PF00977 Histidine biosynthesis protein THIVI_RS15415 PF13187 4Fe-4S dicluster domain THIVI_RS15415 PF04060 Putative Fe-S cluster THIVI_RS15420 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg THIVI_RS15420 PF10371 Domain of unknown function THIVI_RS15420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THIVI_RS15420 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II THIVI_RS15420 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase THIVI_RS15425 PF13375 RnfC Barrel sandwich hybrid domain THIVI_RS15425 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THIVI_RS15425 PF13237 4Fe-4S dicluster domain THIVI_RS15425 PF10531 SLBB domain THIVI_RS15430 PF03116 NQR2, RnfD, RnfE family THIVI_RS15435 PF04205 FMN-binding domain THIVI_RS15440 PF02508 Rnf-Nqr subunit, membrane protein THIVI_RS15445 PF02508 Rnf-Nqr subunit, membrane protein THIVI_RS15455 PF01383 CpcD/allophycocyanin linker domain THIVI_RS15455 PF00970 Oxidoreductase FAD-binding domain THIVI_RS15455 PF00175 Oxidoreductase NAD-binding domain THIVI_RS15460 PF00005 ABC transporter THIVI_RS15460 PF12848 ABC transporter THIVI_RS15475 PF03205 Molybdopterin guanine dinucleotide synthesis protein B THIVI_RS15480 PF02254 TrkA-N domain THIVI_RS15480 PF02080 TrkA-C domain THIVI_RS15485 PF00072 Response regulator receiver domain THIVI_RS15485 PF00158 Sigma-54 interaction domain THIVI_RS15485 PF02954 Bacterial regulatory protein, Fis family THIVI_RS15490 PF00672 HAMP domain THIVI_RS15490 PF00989 PAS fold THIVI_RS15490 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS15490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS15500 PF01189 16S rRNA methyltransferase RsmB/F THIVI_RS15500 PF01029 NusB family THIVI_RS15505 PF02911 Formyl transferase, C-terminal domain THIVI_RS15505 PF00551 Formyl transferase THIVI_RS15510 PF01327 Polypeptide deformylase THIVI_RS15520 PF02481 DNA recombination-mediator protein A THIVI_RS15520 PF17782 DprA winged helix domain THIVI_RS15525 PF04361 Protein of unknown function (DUF494) THIVI_RS15530 PF13368 Topoisomerase C-terminal repeat THIVI_RS15530 PF01751 Toprim domain THIVI_RS15530 PF01131 DNA topoisomerase THIVI_RS15540 PF01300 Telomere recombination THIVI_RS15560 PF03600 Citrate transporter THIVI_RS15565 PF00155 Aminotransferase class I and II THIVI_RS15580 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS15580 PF17862 AAA+ lid domain THIVI_RS15580 PF01434 Peptidase family M41 THIVI_RS15585 PF02080 TrkA-C domain THIVI_RS15585 PF03600 Citrate transporter THIVI_RS15605 PF18030 RimK PreATP-grasp domain THIVI_RS15605 PF08443 RimK-like ATP-grasp domain THIVI_RS15610 PF01252 Signal peptidase (SPase) II THIVI_RS15625 PF08264 Anticodon-binding domain of tRNA THIVI_RS15625 PF00133 tRNA synthetases class I (I, L, M and V) THIVI_RS15625 PF06827 Zinc finger found in FPG and IleRS THIVI_RS15635 PF00155 Aminotransferase class I and II THIVI_RS15640 PF00815 Histidinol dehydrogenase THIVI_RS15650 PF01634 ATP phosphoribosyltransferase THIVI_RS15655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THIVI_RS15670 PF02470 MlaD protein THIVI_RS15675 PF02405 Permease MlaE THIVI_RS15680 PF00005 ABC transporter THIVI_RS15685 PF03109 ABC1 family THIVI_RS15705 PF00392 Bacterial regulatory proteins, gntR family THIVI_RS15705 PF07729 FCD domain THIVI_RS15715 PF00285 Citrate synthase, C-terminal domain THIVI_RS15720 PF03972 MmgE/PrpD family THIVI_RS15760 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS15765 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS15765 PF00360 Phytochrome region THIVI_RS15765 PF08446 PAS fold THIVI_RS15765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS15765 PF01590 GAF domain THIVI_RS15775 PF00005 ABC transporter THIVI_RS15775 PF09383 NIL domain THIVI_RS15790 PF03306 Alpha-acetolactate decarboxylase THIVI_RS15815 PF00005 ABC transporter THIVI_RS15820 PF00950 ABC 3 transport family THIVI_RS15825 PF01475 Ferric uptake regulator family THIVI_RS15855 PF00830 Ribosomal L28 family THIVI_RS15860 PF00471 Ribosomal protein L33 THIVI_RS15885 PF00534 Glycosyl transferases group 1 THIVI_RS15885 PF08323 Starch synthase catalytic domain THIVI_RS15890 PF00012 Hsp70 protein THIVI_RS15905 PF10017 Histidine-specific methyltransferase, SAM-dependent THIVI_RS15910 PF12867 DinB superfamily THIVI_RS15910 PF03781 Sulfatase-modifying factor enzyme 1 THIVI_RS15925 PF01521 Iron-sulphur cluster biosynthesis THIVI_RS15930 PF02657 Fe-S metabolism associated domain THIVI_RS15935 PF00912 Transglycosylase THIVI_RS15940 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS15985 PF00890 FAD binding domain THIVI_RS15990 PF13187 4Fe-4S dicluster domain THIVI_RS15990 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit THIVI_RS15995 PF04241 Protein of unknown function (DUF423) THIVI_RS16000 PF04452 RNA methyltransferase THIVI_RS16005 PF01627 Hpt domain THIVI_RS16005 PF02895 Signal transducing histidine kinase, homodimeric domain THIVI_RS16005 PF01584 CheW-like domain THIVI_RS16005 PF00072 Response regulator receiver domain THIVI_RS16005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS16010 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term THIVI_RS16010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS16020 PF00072 Response regulator receiver domain THIVI_RS16025 PF00072 Response regulator receiver domain THIVI_RS16030 PF02951 Prokaryotic glutathione synthetase, N-terminal domain THIVI_RS16030 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain THIVI_RS16045 PF02622 Uncharacterized ACR, COG1678 THIVI_RS16050 PF03652 Holliday junction resolvase THIVI_RS16055 PF00156 Phosphoribosyl transferase domain THIVI_RS16060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THIVI_RS16060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THIVI_RS16065 PF01979 Amidohydrolase family THIVI_RS16070 PF00437 Type II/IV secretion system protein THIVI_RS16075 PF00437 Type II/IV secretion system protein THIVI_RS16085 PF00731 AIR carboxylase THIVI_RS16090 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain THIVI_RS16090 PF02222 ATP-grasp domain THIVI_RS16100 PF04607 Region found in RelA / SpoT proteins THIVI_RS16100 PF13291 ACT domain THIVI_RS16100 PF02824 TGS domain THIVI_RS16105 PF01192 RNA polymerase Rpb6 THIVI_RS16110 PF00625 Guanylate kinase THIVI_RS16115 PF08340 Domain of unknown function (DUF1732) THIVI_RS16115 PF03755 YicC-like family, N-terminal region THIVI_RS16120 PF00069 Protein kinase domain THIVI_RS16125 PF01138 3' exoribonuclease family, domain 1 THIVI_RS16125 PF03725 3' exoribonuclease family, domain 2 THIVI_RS16130 PF01725 Ham1 family THIVI_RS16135 PF01168 Alanine racemase, N-terminal domain THIVI_RS16140 PF03807 NADP oxidoreductase coenzyme F420-dependent THIVI_RS16140 PF14748 Pyrroline-5-carboxylate reductase dimerisation THIVI_RS16145 PF02325 YGGT family THIVI_RS16150 PF02594 Uncharacterised ACR, YggU family COG1872 THIVI_RS16160 PF00156 Phosphoribosyl transferase domain THIVI_RS16170 PF05159 Capsule polysaccharide biosynthesis protein THIVI_RS16200 PF01979 Amidohydrolase family THIVI_RS16205 PF01008 Initiation factor 2 subunit family THIVI_RS16215 PF01687 Riboflavin kinase THIVI_RS16215 PF06574 FAD synthetase THIVI_RS16225 PF14814 Bifunctional transglycosylase second domain THIVI_RS16225 PF00912 Transglycosylase THIVI_RS16225 PF00905 Penicillin binding protein transpeptidase domain THIVI_RS16235 PF04851 Type III restriction enzyme, res subunit THIVI_RS16235 PF13307 Helicase C-terminal domain THIVI_RS16240 PF00578 AhpC/TSA family THIVI_RS16240 PF10417 C-terminal domain of 1-Cys peroxiredoxin THIVI_RS16245 PF04408 Helicase associated domain (HA2) THIVI_RS16245 PF11898 Domain of unknown function (DUF3418) THIVI_RS16245 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold THIVI_RS16245 PF00270 DEAD/DEAH box helicase THIVI_RS16245 PF00271 Helicase conserved C-terminal domain THIVI_RS16250 PF00563 EAL domain THIVI_RS16250 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS16250 PF00072 Response regulator receiver domain THIVI_RS16255 PF09334 tRNA synthetases class I (M) THIVI_RS16255 PF01588 Putative tRNA binding domain THIVI_RS16275 PF08442 ATP-grasp domain THIVI_RS16275 PF00549 CoA-ligase THIVI_RS16280 PF02629 CoA binding domain THIVI_RS16280 PF00549 CoA-ligase THIVI_RS16290 PF00795 Carbon-nitrogen hydrolase THIVI_RS16290 PF02540 NAD synthase THIVI_RS16295 PF00543 Nitrogen regulatory protein P-II THIVI_RS16300 PF13525 Outer membrane lipoprotein THIVI_RS16305 PF01479 S4 domain THIVI_RS16305 PF00849 RNA pseudouridylate synthase THIVI_RS16310 PF02578 Multi-copper polyphenol oxidoreductase laccase THIVI_RS16320 PF01327 Polypeptide deformylase THIVI_RS16325 PF00595 PDZ domain THIVI_RS16325 PF17804 Tail specific protease N-terminal domain THIVI_RS16325 PF11818 C-terminal domain of tail specific protease (DUF3340) THIVI_RS16325 PF03572 Peptidase family S41 THIVI_RS16330 PF04262 Glutamate-cysteine ligase THIVI_RS16340 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS16340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THIVI_RS16350 PF00730 HhH-GPD superfamily base excision DNA repair protein THIVI_RS16350 PF00633 Helix-hairpin-helix motif THIVI_RS16350 PF10576 Iron-sulfur binding domain of endonuclease III THIVI_RS16355 PF01464 Transglycosylase SLT domain THIVI_RS16365 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THIVI_RS16365 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THIVI_RS16365 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THIVI_RS16365 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THIVI_RS16375 PF01926 50S ribosome-binding GTPase THIVI_RS16380 PF01967 MoaC family THIVI_RS16385 PF00719 Inorganic pyrophosphatase THIVI_RS16395 PF00365 Phosphofructokinase THIVI_RS16405 PF01494 FAD binding domain THIVI_RS16410 PF01494 FAD binding domain THIVI_RS16415 PF05195 Aminopeptidase P, N-terminal domain THIVI_RS16415 PF00557 Metallopeptidase family M24 THIVI_RS16420 PF03695 Uncharacterised protein family (UPF0149) THIVI_RS16430 PF05164 Cell division protein ZapA THIVI_RS16435 PF01812 5-formyltetrahydrofolate cyclo-ligase family THIVI_RS16440 PF08668 HDOD domain THIVI_RS16440 PF00563 EAL domain THIVI_RS16445 PF13185 GAF domain THIVI_RS16445 PF00158 Sigma-54 interaction domain THIVI_RS16445 PF02954 Bacterial regulatory protein, Fis family THIVI_RS16450 PF00989 PAS fold THIVI_RS16450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS16455 PF02508 Rnf-Nqr subunit, membrane protein THIVI_RS16460 PF04060 Putative Fe-S cluster THIVI_RS16465 PF13237 4Fe-4S dicluster domain THIVI_RS16465 PF13375 RnfC Barrel sandwich hybrid domain THIVI_RS16465 PF10531 SLBB domain THIVI_RS16465 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THIVI_RS16470 PF03116 NQR2, RnfD, RnfE family THIVI_RS16475 PF04205 FMN-binding domain THIVI_RS16480 PF02508 Rnf-Nqr subunit, membrane protein THIVI_RS16485 PF03658 RnfH family Ubiquitin THIVI_RS16490 PF01844 HNH endonuclease THIVI_RS16495 PF01170 Putative RNA methylase family UPF0020 THIVI_RS16495 PF02926 THUMP domain THIVI_RS16495 PF10672 S-adenosylmethionine-dependent methyltransferase THIVI_RS16505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THIVI_RS16505 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS16510 PF00365 Phosphofructokinase THIVI_RS16515 PF00364 Biotin-requiring enzyme THIVI_RS16515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) THIVI_RS16515 PF02817 e3 binding domain THIVI_RS16520 PF00456 Transketolase, thiamine diphosphate binding domain THIVI_RS16520 PF17831 Pyruvate dehydrogenase E1 component middle domain THIVI_RS16530 PF01726 LexA DNA binding domain THIVI_RS16530 PF00717 Peptidase S24-like THIVI_RS16555 PF07690 Major Facilitator Superfamily THIVI_RS16560 PF00581 Rhodanese-like domain THIVI_RS16565 PF09297 NADH pyrophosphatase zinc ribbon domain THIVI_RS16565 PF00293 NUDIX domain THIVI_RS16580 PF10693 Protein of unknown function (DUF2499) THIVI_RS16605 PF00005 ABC transporter THIVI_RS16615 PF03781 Sulfatase-modifying factor enzyme 1 THIVI_RS16625 PF00498 FHA domain THIVI_RS16625 PF12401 Protein of unknown function (DUF2662) THIVI_RS16655 PF02934 GatB/GatE catalytic domain THIVI_RS16655 PF02637 GatB domain THIVI_RS16660 PF00106 short chain dehydrogenase THIVI_RS16665 PF09361 Phasin protein THIVI_RS16670 PF05233 PHB accumulation regulatory domain THIVI_RS16670 PF07879 PHB/PHA accumulation regulator DNA-binding domain THIVI_RS16675 PF02803 Thiolase, C-terminal domain THIVI_RS16675 PF00108 Thiolase, N-terminal domain THIVI_RS16680 PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) THIVI_RS16685 PF00561 alpha/beta hydrolase fold THIVI_RS16700 PF01618 MotA/TolQ/ExbB proton channel family THIVI_RS16705 PF02472 Biopolymer transport protein ExbD/TolR THIVI_RS16710 PF03544 Gram-negative bacterial TonB protein C-terminal THIVI_RS16725 PF07715 TonB-dependent Receptor Plug Domain THIVI_RS16725 PF00593 TonB dependent receptor THIVI_RS16735 PF00528 Binding-protein-dependent transport system inner membrane component THIVI_RS16740 PF08402 TOBE domain THIVI_RS16740 PF00005 ABC transporter THIVI_RS16750 PF00072 Response regulator receiver domain THIVI_RS16750 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS16750 PF00563 EAL domain THIVI_RS16755 PF13667 ThiC-associated domain THIVI_RS16755 PF01964 Radical SAM ThiC family THIVI_RS16780 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS16780 PF00072 Response regulator receiver domain THIVI_RS16785 PF00343 Carbohydrate phosphorylase THIVI_RS16800 PF12848 ABC transporter THIVI_RS16800 PF00005 ABC transporter THIVI_RS16805 PF13335 Magnesium chelatase, subunit ChlI C-terminal THIVI_RS16805 PF01078 Magnesium chelatase, subunit ChlI THIVI_RS16810 PF04380 Membrane fusogenic activity THIVI_RS16820 PF00543 Nitrogen regulatory protein P-II THIVI_RS16825 PF00909 Ammonium Transporter Family THIVI_RS16830 PF17284 Spermidine synthase tetramerisation domain THIVI_RS16835 PF01610 Transposase THIVI_RS16835 PF13542 Helix-turn-helix domain of transposase family ISL3 THIVI_RS16835 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 THIVI_RS16840 PF01804 Penicillin amidase THIVI_RS16845 PF01218 Coproporphyrinogen III oxidase THIVI_RS16855 PF00248 Aldo/keto reductase family THIVI_RS16860 PF00834 Ribulose-phosphate 3 epimerase family THIVI_RS16865 PF13419 Haloacid dehalogenase-like hydrolase THIVI_RS16870 PF00425 chorismate binding enzyme THIVI_RS16870 PF04715 Anthranilate synthase component I, N terminal region THIVI_RS16895 PF00375 Sodium:dicarboxylate symporter family THIVI_RS16910 PF12833 Helix-turn-helix domain THIVI_RS16915 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) THIVI_RS16935 PF00034 Cytochrome c THIVI_RS16940 PF00034 Cytochrome c THIVI_RS16945 PF08264 Anticodon-binding domain of tRNA THIVI_RS16945 PF00133 tRNA synthetases class I (I, L, M and V) THIVI_RS16945 PF10458 Valyl tRNA synthetase tRNA binding arm THIVI_RS16950 PF17761 DUF1016 N-terminal domain THIVI_RS16950 PF06250 YhcG PDDEXK nuclease domain THIVI_RS16975 PF08676 MutL C terminal dimerisation domain THIVI_RS16975 PF01119 DNA mismatch repair protein, C-terminal domain THIVI_RS16980 PF03852 DNA mismatch endonuclease Vsr THIVI_RS17055 PF03237 Terminase-like family THIVI_RS17085 PF01555 DNA methylase THIVI_RS17160 PF01464 Transglycosylase SLT domain THIVI_RS17160 PF10145 Phage-related minor tail protein THIVI_RS17160 PF01551 Peptidase family M23 THIVI_RS17185 PF01609 Transposase DDE domain THIVI_RS17185 PF13808 DDE_Tnp_1-associated THIVI_RS17210 PF01609 Transposase DDE domain THIVI_RS17210 PF13808 DDE_Tnp_1-associated THIVI_RS17220 PF03480 Bacterial extracellular solute-binding protein, family 7 THIVI_RS17225 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component THIVI_RS17235 PF01292 Prokaryotic cytochrome b561 THIVI_RS17240 PF01544 CorA-like Mg2+ transporter protein THIVI_RS17270 PF07690 Major Facilitator Superfamily THIVI_RS17285 PF03030 Inorganic H+ pyrophosphatase THIVI_RS17300 PF08003 Protein of unknown function (DUF1698) THIVI_RS17305 PF13649 Methyltransferase domain THIVI_RS17310 PF17941 Polyphosphate kinase C-terminal domain 1 THIVI_RS17310 PF13090 Polyphosphate kinase C-terminal domain 2 THIVI_RS17310 PF02503 Polyphosphate kinase middle domain THIVI_RS17310 PF13089 Polyphosphate kinase N-terminal domain THIVI_RS17320 PF02541 Ppx/GppA phosphatase family THIVI_RS17330 PF12794 Mechanosensitive ion channel inner membrane domain 1 THIVI_RS17330 PF12795 Mechanosensitive ion channel porin domain THIVI_RS17330 PF00924 Mechanosensitive ion channel THIVI_RS17335 PF00696 Amino acid kinase family THIVI_RS17335 PF00583 Acetyltransferase (GNAT) family THIVI_RS17340 PF00072 Response regulator receiver domain THIVI_RS17340 PF00158 Sigma-54 interaction domain THIVI_RS17340 PF02954 Bacterial regulatory protein, Fis family THIVI_RS17345 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain THIVI_RS17345 PF05221 S-adenosyl-L-homocysteine hydrolase THIVI_RS17360 PF02219 Methylenetetrahydrofolate reductase THIVI_RS17365 PF01555 DNA methylase THIVI_RS17365 PF18273 Type III R-M EcoP15I C-terminal domain THIVI_RS17370 PF13808 DDE_Tnp_1-associated THIVI_RS17370 PF01609 Transposase DDE domain THIVI_RS17400 PF00117 Glutamine amidotransferase class-I THIVI_RS17405 PF00591 Glycosyl transferase family, a/b domain THIVI_RS17405 PF02885 Glycosyl transferase family, helical bundle domain THIVI_RS17410 PF00218 Indole-3-glycerol phosphate synthase THIVI_RS17415 PF13545 Crp-like helix-turn-helix domain THIVI_RS17415 PF00027 Cyclic nucleotide-binding domain THIVI_RS17420 PF02566 OsmC-like protein THIVI_RS17425 PF02675 S-adenosylmethionine decarboxylase THIVI_RS17430 PF03232 Ubiquinone biosynthesis protein COQ7 THIVI_RS17435 PF02754 Cysteine-rich domain THIVI_RS17435 PF13183 4Fe-4S dicluster domain THIVI_RS17445 PF00572 Ribosomal protein L13 THIVI_RS17450 PF00380 Ribosomal protein S9/S16 THIVI_RS17465 PF13333 Integrase core domain THIVI_RS17465 PF00665 Integrase core domain THIVI_RS17465 PF13276 HTH-like domain THIVI_RS17475 PF00271 Helicase conserved C-terminal domain THIVI_RS17475 PF00270 DEAD/DEAH box helicase THIVI_RS17475 PF03880 DbpA RNA binding domain THIVI_RS17480 PF03814 Potassium-transporting ATPase A subunit THIVI_RS17485 PF13808 DDE_Tnp_1-associated THIVI_RS17485 PF01609 Transposase DDE domain THIVI_RS17510 PF01139 tRNA-splicing ligase RtcB THIVI_RS17515 PF00795 Carbon-nitrogen hydrolase THIVI_RS17525 PF02875 Mur ligase family, glutamate ligase domain THIVI_RS17525 PF01225 Mur ligase family, catalytic domain THIVI_RS17525 PF08245 Mur ligase middle domain THIVI_RS17530 PF02441 Flavoprotein THIVI_RS17535 PF01553 Acyltransferase THIVI_RS17535 PF13193 AMP-binding enzyme C-terminal domain THIVI_RS17535 PF00501 AMP-binding enzyme THIVI_RS17545 PF00293 NUDIX domain THIVI_RS17550 PF05524 PEP-utilising enzyme, N-terminal THIVI_RS17550 PF00391 PEP-utilising enzyme, mobile domain THIVI_RS17550 PF02896 PEP-utilising enzyme, TIM barrel domain THIVI_RS17550 PF01590 GAF domain THIVI_RS17560 PF13439 Glycosyltransferase Family 4 THIVI_RS17565 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain THIVI_RS17565 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THIVI_RS17575 PF11992 Domain of unknown function (DUF3488) THIVI_RS17575 PF13559 Domain of unknown function (DUF4129) THIVI_RS17575 PF01841 Transglutaminase-like superfamily THIVI_RS17660 PF14659 Phage integrase, N-terminal SAM-like domain THIVI_RS17660 PF00589 Phage integrase family THIVI_RS17670 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) THIVI_RS17675 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family THIVI_RS17680 PF00148 Nitrogenase component 1 type Oxidoreductase THIVI_RS17685 PF00148 Nitrogenase component 1 type Oxidoreductase THIVI_RS17685 PF11844 Domain of unknown function (DUF3364) THIVI_RS17690 PF06988 NifT/FixU protein THIVI_RS17695 PF00037 4Fe-4S binding domain THIVI_RS17700 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal THIVI_RS17700 PF02579 Dinitrogenase iron-molybdenum cofactor THIVI_RS17710 PF01816 Leucine rich repeat variant THIVI_RS17710 PF05484 LRV protein FeS4 cluster THIVI_RS17725 PF00343 Carbohydrate phosphorylase THIVI_RS17735 PF03600 Citrate transporter THIVI_RS17740 PF00497 Bacterial extracellular solute-binding proteins, family 3 THIVI_RS17745 PF01594 AI-2E family transporter THIVI_RS17750 PF03976 Polyphosphate kinase 2 (PPK2) THIVI_RS17790 PF00916 Sulfate permease family THIVI_RS17790 PF01740 STAS domain THIVI_RS17810 PF00291 Pyridoxal-phosphate dependent enzyme THIVI_RS17810 PF00585 C-terminal regulatory domain of Threonine dehydratase THIVI_RS17815 PF06827 Zinc finger found in FPG and IleRS THIVI_RS17815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain THIVI_RS17815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain THIVI_RS17830 PF00534 Glycosyl transferases group 1 THIVI_RS17850 PF01131 DNA topoisomerase THIVI_RS17850 PF01751 Toprim domain THIVI_RS17870 PF04607 Region found in RelA / SpoT proteins THIVI_RS17870 PF02824 TGS domain THIVI_RS17870 PF13291 ACT domain THIVI_RS17880 PF00072 Response regulator receiver domain THIVI_RS17885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS17885 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS17885 PF01627 Hpt domain THIVI_RS17885 PF00072 Response regulator receiver domain THIVI_RS17890 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS17890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS17890 PF00672 HAMP domain THIVI_RS17895 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS17895 PF00072 Response regulator receiver domain THIVI_RS17905 PF05175 Methyltransferase small domain THIVI_RS17915 PF01455 HupF/HypC family THIVI_RS17920 PF01924 Hydrogenase formation hypA family THIVI_RS17930 PF02769 AIR synthase related protein, C-terminal domain THIVI_RS17930 PF00586 AIR synthase related protein, N-terminal domain THIVI_RS17945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THIVI_RS17945 PF03466 LysR substrate binding domain THIVI_RS17950 PF16363 GDP-mannose 4,6 dehydratase THIVI_RS17955 PF00483 Nucleotidyl transferase THIVI_RS17960 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase THIVI_RS17965 PF04321 RmlD substrate binding domain THIVI_RS17970 PF09335 SNARE associated Golgi protein THIVI_RS17995 PF01609 Transposase DDE domain THIVI_RS17995 PF13808 DDE_Tnp_1-associated THIVI_RS18010 PF01609 Transposase DDE domain THIVI_RS18010 PF13808 DDE_Tnp_1-associated THIVI_RS18015 PF00072 Response regulator receiver domain THIVI_RS18015 PF00196 Bacterial regulatory proteins, luxR family THIVI_RS18040 PF00589 Phage integrase family THIVI_RS18040 PF02899 Phage integrase, N-terminal SAM-like domain THIVI_RS18045 PF04461 Protein of unknown function (DUF520) THIVI_RS18050 PF13098 Thioredoxin-like domain THIVI_RS18050 PF10411 Disulfide bond isomerase protein N-terminus THIVI_RS18075 PF13808 DDE_Tnp_1-associated THIVI_RS18075 PF01609 Transposase DDE domain THIVI_RS18085 PF05190 MutS family domain IV THIVI_RS18085 PF05192 MutS domain III THIVI_RS18085 PF01624 MutS domain I THIVI_RS18085 PF00488 MutS domain V THIVI_RS18085 PF05188 MutS domain II THIVI_RS18090 PF13505 Outer membrane protein beta-barrel domain THIVI_RS18090 PF00691 OmpA family THIVI_RS18110 PF01784 NIF3 (NGG1p interacting factor 3) THIVI_RS18115 PF00355 Rieske [2Fe-2S] domain THIVI_RS18115 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal THIVI_RS18120 PF00032 Cytochrome b(C-terminal)/b6/petD THIVI_RS18120 PF00033 Cytochrome b/b6/petB THIVI_RS18125 PF02167 Cytochrome C1 family THIVI_RS18130 PF02798 Glutathione S-transferase, N-terminal domain THIVI_RS18130 PF00043 Glutathione S-transferase, C-terminal domain THIVI_RS18135 PF04386 Stringent starvation protein B THIVI_RS18145 PF04362 Bacterial Fe(2+) trafficking THIVI_RS18150 PF14815 NUDIX domain THIVI_RS18150 PF00633 Helix-hairpin-helix motif THIVI_RS18150 PF00730 HhH-GPD superfamily base excision DNA repair protein THIVI_RS18160 PF00501 AMP-binding enzyme THIVI_RS18170 PF00271 Helicase conserved C-terminal domain THIVI_RS18170 PF03880 DbpA RNA binding domain THIVI_RS18170 PF00270 DEAD/DEAH box helicase THIVI_RS18175 PF04809 HupH hydrogenase expression protein, C-terminal conserved region THIVI_RS18180 PF01750 Hydrogenase maturation protease THIVI_RS18185 PF01292 Prokaryotic cytochrome b561 THIVI_RS18190 PF00374 Nickel-dependent hydrogenase THIVI_RS18195 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal THIVI_RS18195 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THIVI_RS18215 PF17999 Pullulanase N1-terminal domain THIVI_RS18215 PF00128 Alpha amylase, catalytic domain THIVI_RS18215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THIVI_RS18225 PF01168 Alanine racemase, N-terminal domain THIVI_RS18225 PF00842 Alanine racemase, C-terminal domain THIVI_RS18250 PF08502 LeuA allosteric (dimerisation) domain THIVI_RS18250 PF00682 HMGL-like THIVI_RS18255 PF03167 Uracil DNA glycosylase superfamily THIVI_RS18265 PF01569 PAP2 superfamily THIVI_RS18270 PF00534 Glycosyl transferases group 1 THIVI_RS18270 PF13439 Glycosyltransferase Family 4 THIVI_RS18285 PF00375 Sodium:dicarboxylate symporter family THIVI_RS18290 PF02875 Mur ligase family, glutamate ligase domain THIVI_RS18290 PF01225 Mur ligase family, catalytic domain THIVI_RS18290 PF08245 Mur ligase middle domain THIVI_RS18310 PF01938 TRAM domain THIVI_RS18310 PF04055 Radical SAM superfamily THIVI_RS18310 PF00919 Uncharacterized protein family UPF0004 THIVI_RS18340 PF01177 Asp/Glu/Hydantoin racemase THIVI_RS18350 PF01625 Peptide methionine sulfoxide reductase THIVI_RS18360 PF05746 DALR anticodon binding domain THIVI_RS18360 PF03485 Arginyl tRNA synthetase N terminal domain THIVI_RS18360 PF00750 tRNA synthetases class I (R) THIVI_RS18365 PF00271 Helicase conserved C-terminal domain THIVI_RS18365 PF17764 3′ DNA-binding domain (3′BD) THIVI_RS18365 PF18074 Primosomal protein N C-terminal domain THIVI_RS18365 PF18319 PriA DNA helicase Cys-rich region (CRR) domain THIVI_RS18365 PF00270 DEAD/DEAH box helicase THIVI_RS18375 PF03881 Fructosamine kinase THIVI_RS18415 PF01618 MotA/TolQ/ExbB proton channel family THIVI_RS18420 PF02472 Biopolymer transport protein ExbD/TolR THIVI_RS18425 PF00005 ABC transporter THIVI_RS18425 PF00664 ABC transporter transmembrane region THIVI_RS18430 PF02606 Tetraacyldisaccharide-1-P 4'-kinase THIVI_RS18435 PF02348 Cytidylyltransferase THIVI_RS18440 PF00474 Sodium:solute symporter family THIVI_RS18445 PF04341 Protein of unknown function, DUF485 THIVI_RS18450 PF01180 Dihydroorotate dehydrogenase THIVI_RS18455 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase THIVI_RS18455 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II THIVI_RS18455 PF10371 Domain of unknown function THIVI_RS18455 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg THIVI_RS18455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THIVI_RS18460 PF00583 Acetyltransferase (GNAT) family THIVI_RS18480 PF03063 Prismane/CO dehydrogenase family THIVI_RS18495 PF07995 Glucose / Sorbosone dehydrogenase THIVI_RS18500 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS18500 PF00563 EAL domain THIVI_RS18500 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS18510 PF01425 Amidase THIVI_RS18515 PF02686 Glu-tRNAGln amidotransferase C subunit THIVI_RS18525 PF04085 rod shape-determining protein MreC THIVI_RS18535 PF00905 Penicillin binding protein transpeptidase domain THIVI_RS18535 PF03717 Penicillin-binding Protein dimerisation domain THIVI_RS18540 PF01098 Cell cycle protein THIVI_RS18545 PF13406 Transglycosylase SLT domain THIVI_RS18550 PF03330 Lytic transglycolase THIVI_RS18550 PF05036 Sporulation related domain THIVI_RS18555 PF00768 D-alanyl-D-alanine carboxypeptidase THIVI_RS18555 PF07943 Penicillin-binding protein 5, C-terminal domain THIVI_RS18560 PF04359 Protein of unknown function (DUF493) THIVI_RS18565 PF03099 Biotin/lipoate A/B protein ligase family THIVI_RS18590 PF00749 tRNA synthetases class I (E and Q), catalytic domain THIVI_RS18600 PF01702 Queuine tRNA-ribosyltransferase THIVI_RS18605 PF00011 Hsp20/alpha crystallin family THIVI_RS18610 PF02558 Ketopantoate reductase PanE/ApbA THIVI_RS18610 PF08546 Ketopantoate reductase PanE/ApbA C terminal THIVI_RS18615 PF08240 Alcohol dehydrogenase GroES-like domain THIVI_RS18615 PF00698 Acyl transferase domain THIVI_RS18615 PF14765 Polyketide synthase dehydratase THIVI_RS18615 PF00550 Phosphopantetheine attachment site THIVI_RS18615 PF08659 KR domain THIVI_RS18625 PF01171 PP-loop family THIVI_RS18645 PF02817 e3 binding domain THIVI_RS18645 PF00364 Biotin-requiring enzyme THIVI_RS18645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) THIVI_RS18650 PF16078 2-oxoglutarate dehydrogenase N-terminus THIVI_RS18650 PF00676 Dehydrogenase E1 component THIVI_RS18650 PF16870 2-oxoglutarate dehydrogenase C-terminal THIVI_RS18650 PF02779 Transketolase, pyrimidine binding domain THIVI_RS18665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS18665 PF00672 HAMP domain THIVI_RS18665 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS18670 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS18670 PF00072 Response regulator receiver domain THIVI_RS18685 PF01432 Peptidase family M3 THIVI_RS18695 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase THIVI_RS18700 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) THIVI_RS18715 PF01370 NAD dependent epimerase/dehydratase family THIVI_RS18720 PF00175 Oxidoreductase NAD-binding domain THIVI_RS18720 PF00111 2Fe-2S iron-sulfur cluster binding domain THIVI_RS18720 PF00970 Oxidoreductase FAD-binding domain THIVI_RS18770 PF02342 TerD domain THIVI_RS18780 PF02602 Uroporphyrinogen-III synthase HemD THIVI_RS18785 PF03900 Porphobilinogen deaminase, C-terminal domain THIVI_RS18785 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain THIVI_RS18810 PF01609 Transposase DDE domain THIVI_RS18810 PF13808 DDE_Tnp_1-associated THIVI_RS18840 PF03600 Citrate transporter THIVI_RS18845 PF03884 DNA gyrase inhibitor YacG THIVI_RS18850 PF07072 Cell division protein THIVI_RS18860 PF01734 Patatin-like phospholipase THIVI_RS18875 PF01420 Type I restriction modification DNA specificity domain THIVI_RS18885 PF01668 SmpB protein THIVI_RS18890 PF00121 Triosephosphate isomerase THIVI_RS18895 PF03840 Preprotein translocase SecG subunit THIVI_RS18905 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 THIVI_RS18910 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THIVI_RS18915 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THIVI_RS18920 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THIVI_RS18930 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THIVI_RS18930 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THIVI_RS18930 PF10531 SLBB domain THIVI_RS18935 PF00384 Molybdopterin oxidoreductase THIVI_RS18935 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal THIVI_RS18935 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THIVI_RS18935 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THIVI_RS18935 PF00384 Molybdopterin oxidoreductase THIVI_RS18935 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal THIVI_RS18940 PF00146 NADH dehydrogenase THIVI_RS18945 PF12838 4Fe-4S dicluster domain THIVI_RS18950 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 THIVI_RS18955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L THIVI_RS18960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THIVI_RS18960 PF00361 Proton-conducting membrane transporter THIVI_RS18965 PF00361 Proton-conducting membrane transporter THIVI_RS18965 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus THIVI_RS18970 PF00361 Proton-conducting membrane transporter THIVI_RS18975 PF00701 Dihydrodipicolinate synthetase family THIVI_RS18980 PF06804 NlpB/DapX lipoprotein THIVI_RS18985 PF00072 Response regulator receiver domain THIVI_RS18985 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS19010 PF01292 Prokaryotic cytochrome b561 THIVI_RS19020 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THIVI_RS19020 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal THIVI_RS19025 PF13247 4Fe-4S dicluster domain THIVI_RS19030 PF03916 Polysulphide reductase, NrfD THIVI_RS19035 PF00374 Nickel-dependent hydrogenase THIVI_RS19040 PF01750 Hydrogenase maturation protease THIVI_RS19065 PF02796 Helix-turn-helix domain of resolvase THIVI_RS19065 PF00239 Resolvase, N terminal domain THIVI_RS19080 PF02954 Bacterial regulatory protein, Fis family THIVI_RS19080 PF00158 Sigma-54 interaction domain THIVI_RS19080 PF00072 Response regulator receiver domain THIVI_RS19085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS19085 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS19110 PF02445 Quinolinate synthetase A protein THIVI_RS19125 PF00873 AcrB/AcrD/AcrF family THIVI_RS19155 PF03734 L,D-transpeptidase catalytic domain THIVI_RS19160 PF01464 Transglycosylase SLT domain THIVI_RS19160 PF01476 LysM domain THIVI_RS19170 PF00075 RNase H THIVI_RS19175 PF00929 Exonuclease THIVI_RS19180 PF00027 Cyclic nucleotide-binding domain THIVI_RS19180 PF13545 Crp-like helix-turn-helix domain THIVI_RS19185 PF00117 Glutamine amidotransferase class-I THIVI_RS19185 PF06418 CTP synthase N-terminus THIVI_RS19190 PF00793 DAHP synthetase I family THIVI_RS19210 PF03952 Enolase, N-terminal domain THIVI_RS19210 PF00113 Enolase, C-terminal TIM barrel domain THIVI_RS19215 PF04977 Septum formation initiator THIVI_RS19220 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase THIVI_RS19255 PF16886 ATPsynthase alpha/beta subunit N-term extension THIVI_RS19255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THIVI_RS19255 PF02874 ATP synthase alpha/beta family, beta-barrel domain THIVI_RS19280 PF01813 ATP synthase subunit D THIVI_RS19285 PF00563 EAL domain THIVI_RS19285 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS19285 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS19290 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS19290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS19290 PF00072 Response regulator receiver domain THIVI_RS19290 PF01627 Hpt domain THIVI_RS19290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS19290 PF00672 HAMP domain THIVI_RS19295 PF00072 Response regulator receiver domain THIVI_RS19305 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region THIVI_RS19305 PF01243 Pyridoxamine 5'-phosphate oxidase THIVI_RS19310 PF00463 Isocitrate lyase family THIVI_RS19315 PF03737 Aldolase/RraA THIVI_RS19320 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) THIVI_RS19325 PF03853 YjeF-related protein N-terminus THIVI_RS19325 PF01256 Carbohydrate kinase THIVI_RS19330 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE THIVI_RS19335 PF01520 N-acetylmuramoyl-L-alanine amidase THIVI_RS19335 PF11741 AMIN domain THIVI_RS19340 PF08676 MutL C terminal dimerisation domain THIVI_RS19340 PF01119 DNA mismatch repair protein, C-terminal domain THIVI_RS19345 PF00749 tRNA synthetases class I (E and Q), catalytic domain THIVI_RS19350 PF01258 Prokaryotic dksA/traR C4-type zinc finger THIVI_RS19355 PF13419 Haloacid dehalogenase-like hydrolase THIVI_RS19360 PF00155 Aminotransferase class I and II THIVI_RS19375 PF03969 AFG1-like ATPase THIVI_RS19380 PF02609 Exonuclease VII small subunit THIVI_RS19385 PF00348 Polyprenyl synthetase THIVI_RS19395 PF00893 Small Multidrug Resistance protein THIVI_RS19400 PF02649 Type I GTP cyclohydrolase folE2 THIVI_RS19425 PF00072 Response regulator receiver domain THIVI_RS19440 PF01053 Cys/Met metabolism PLP-dependent enzyme THIVI_RS19475 PF00534 Glycosyl transferases group 1 THIVI_RS19475 PF13579 Glycosyl transferase 4-like domain THIVI_RS19480 PF01527 Transposase THIVI_RS19500 PF13439 Glycosyltransferase Family 4 THIVI_RS19500 PF00534 Glycosyl transferases group 1 THIVI_RS19530 PF00005 ABC transporter THIVI_RS19555 PF08544 GHMP kinases C terminal THIVI_RS19555 PF00288 GHMP kinases N terminal domain THIVI_RS19560 PF13580 SIS domain THIVI_RS19565 PF00483 Nucleotidyl transferase THIVI_RS19575 PF14307 Glycosyltransferase WbsX THIVI_RS19575 PF05045 Rhamnan synthesis protein F THIVI_RS19580 PF00535 Glycosyl transferase family 2 THIVI_RS19590 PF00535 Glycosyl transferase family 2 THIVI_RS19615 PF00535 Glycosyl transferase family 2 THIVI_RS19625 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 THIVI_RS19625 PF00535 Glycosyl transferase family 2 THIVI_RS19635 PF00534 Glycosyl transferases group 1 THIVI_RS19635 PF13439 Glycosyltransferase Family 4 THIVI_RS19640 PF13439 Glycosyltransferase Family 4 THIVI_RS19640 PF00534 Glycosyl transferases group 1 THIVI_RS19655 PF03193 RsgA GTPase THIVI_RS19665 PF00929 Exonuclease THIVI_RS19700 PF02660 Glycerol-3-phosphate acyltransferase THIVI_RS19705 PF00989 PAS fold THIVI_RS19705 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS19705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS19710 PF00814 Glycoprotease family THIVI_RS19715 PF01165 Ribosomal protein S21 THIVI_RS19720 PF09424 Yqey-like protein THIVI_RS19725 PF01807 CHC2 zinc finger THIVI_RS19725 PF10410 DnaB-helicase binding domain of primase THIVI_RS19725 PF08275 DNA primase catalytic core, N-terminal domain THIVI_RS19725 PF08278 DNA primase DnaG DnaB-binding THIVI_RS19725 PF13662 Toprim domain THIVI_RS19730 PF03979 Sigma-70 factor, region 1.1 THIVI_RS19730 PF04546 Sigma-70, non-essential region THIVI_RS19730 PF00140 Sigma-70 factor, region 1.2 THIVI_RS19730 PF04542 Sigma-70 region 2 THIVI_RS19730 PF04539 Sigma-70 region 3 THIVI_RS19730 PF04545 Sigma-70, region 4 THIVI_RS19745 PF07690 Major Facilitator Superfamily THIVI_RS19750 PF14403 Circularly permuted ATP-grasp type 2 THIVI_RS19750 PF04107 Glutamate-cysteine ligase family 2(GCS2) THIVI_RS19760 PF01734 Patatin-like phospholipase THIVI_RS19795 PF00375 Sodium:dicarboxylate symporter family THIVI_RS19805 PF02590 Predicted SPOUT methyltransferase THIVI_RS19810 PF02545 Maf-like protein THIVI_RS19815 PF10150 Ribonuclease E/G family THIVI_RS19815 PF00575 S1 RNA binding domain THIVI_RS19825 PF00795 Carbon-nitrogen hydrolase THIVI_RS19830 PF01523 Putative modulator of DNA gyrase THIVI_RS19835 PF00271 Helicase conserved C-terminal domain THIVI_RS19835 PF04851 Type III restriction enzyme, res subunit THIVI_RS19850 PF00196 Bacterial regulatory proteins, luxR family THIVI_RS19850 PF00072 Response regulator receiver domain THIVI_RS19855 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS19865 PF00196 Bacterial regulatory proteins, luxR family THIVI_RS19865 PF00072 Response regulator receiver domain THIVI_RS19870 PF02743 Cache domain THIVI_RS19870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS19870 PF00672 HAMP domain THIVI_RS19875 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS19875 PF00072 Response regulator receiver domain THIVI_RS19885 PF02895 Signal transducing histidine kinase, homodimeric domain THIVI_RS19885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS19885 PF01627 Hpt domain THIVI_RS19885 PF01584 CheW-like domain THIVI_RS19895 PF01584 CheW-like domain THIVI_RS19900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS19900 PF08269 Cache domain THIVI_RS19900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS19900 PF08269 Cache domain THIVI_RS19905 PF01584 CheW-like domain THIVI_RS19910 PF03705 CheR methyltransferase, all-alpha domain THIVI_RS19910 PF01739 CheR methyltransferase, SAM binding domain THIVI_RS19915 PF03975 CheD chemotactic sensory transduction THIVI_RS19920 PF01339 CheB methylesterase THIVI_RS19920 PF00072 Response regulator receiver domain THIVI_RS19925 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS19925 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS19925 PF00563 EAL domain THIVI_RS19925 PF13188 PAS domain THIVI_RS19930 PF01523 Putative modulator of DNA gyrase THIVI_RS19950 PF00282 Pyridoxal-dependent decarboxylase conserved domain THIVI_RS19970 PF01555 DNA methylase THIVI_RS19970 PF18273 Type III R-M EcoP15I C-terminal domain THIVI_RS20000 PF01523 Putative modulator of DNA gyrase THIVI_RS20025 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain THIVI_RS20035 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS20035 PF00563 EAL domain THIVI_RS20035 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS20040 PF08668 HDOD domain THIVI_RS20050 PF01259 SAICAR synthetase THIVI_RS20060 PF01042 Endoribonuclease L-PSP THIVI_RS20065 PF13406 Transglycosylase SLT domain THIVI_RS20070 PF01894 Uncharacterised protein family UPF0047 THIVI_RS20075 PF00270 DEAD/DEAH box helicase THIVI_RS20075 PF17191 RecG wedge domain THIVI_RS20075 PF00271 Helicase conserved C-terminal domain THIVI_RS20080 PF01040 UbiA prenyltransferase family THIVI_RS20085 PF01323 DSBA-like thioredoxin domain THIVI_RS20110 PF00072 Response regulator receiver domain THIVI_RS20115 PF00072 Response regulator receiver domain THIVI_RS20115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS20115 PF00672 HAMP domain THIVI_RS20115 PF01627 Hpt domain THIVI_RS20115 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS20115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS20120 PF00899 ThiF family THIVI_RS20155 PF05175 Methyltransferase small domain THIVI_RS20155 PF17827 PrmC N-terminal domain THIVI_RS20160 PF00472 RF-1 domain THIVI_RS20160 PF03462 PCRF domain THIVI_RS20165 PF01488 Shikimate / quinate 5-dehydrogenase THIVI_RS20165 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain THIVI_RS20165 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain THIVI_RS20175 PF00288 GHMP kinases N terminal domain THIVI_RS20175 PF08544 GHMP kinases C terminal THIVI_RS20185 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase THIVI_RS20185 PF14572 Phosphoribosyl synthetase-associated domain THIVI_RS20190 PF01386 Ribosomal L25p family THIVI_RS20190 PF14693 Ribosomal protein TL5, C-terminal domain THIVI_RS20195 PF01195 Peptidyl-tRNA hydrolase THIVI_RS20205 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THIVI_RS20205 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain THIVI_RS20205 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain THIVI_RS20225 PF00009 Elongation factor Tu GTP binding domain THIVI_RS20225 PF03143 Elongation factor Tu C-terminal domain THIVI_RS20225 PF03144 Elongation factor Tu domain 2 THIVI_RS20235 PF00584 SecE/Sec61-gamma subunits of protein translocation complex THIVI_RS20240 PF00467 KOW motif THIVI_RS20240 PF02357 Transcription termination factor nusG THIVI_RS20245 PF00298 Ribosomal protein L11, RNA binding domain THIVI_RS20245 PF03946 Ribosomal protein L11, N-terminal domain THIVI_RS20250 PF00687 Ribosomal protein L1p/L10e family THIVI_RS20255 PF00466 Ribosomal protein L10 THIVI_RS20260 PF00542 Ribosomal protein L7/L12 C-terminal domain THIVI_RS20260 PF16320 Ribosomal protein L7/L12 dimerisation domain THIVI_RS20265 PF04561 RNA polymerase Rpb2, domain 2 THIVI_RS20265 PF04565 RNA polymerase Rpb2, domain 3 THIVI_RS20265 PF10385 RNA polymerase beta subunit external 1 domain THIVI_RS20265 PF00562 RNA polymerase Rpb2, domain 6 THIVI_RS20265 PF04560 RNA polymerase Rpb2, domain 7 THIVI_RS20265 PF04563 RNA polymerase beta subunit THIVI_RS20270 PF05000 RNA polymerase Rpb1, domain 4 THIVI_RS20270 PF04997 RNA polymerase Rpb1, domain 1 THIVI_RS20270 PF04998 RNA polymerase Rpb1, domain 5 THIVI_RS20270 PF04983 RNA polymerase Rpb1, domain 3 THIVI_RS20270 PF00623 RNA polymerase Rpb1, domain 2 THIVI_RS20275 PF00164 Ribosomal protein S12/S23 THIVI_RS20280 PF00177 Ribosomal protein S7p/S5e THIVI_RS20285 PF03764 Elongation factor G, domain IV THIVI_RS20285 PF03144 Elongation factor Tu domain 2 THIVI_RS20285 PF00679 Elongation factor G C-terminus THIVI_RS20285 PF00009 Elongation factor Tu GTP binding domain THIVI_RS20285 PF14492 Elongation Factor G, domain II THIVI_RS20290 PF00009 Elongation factor Tu GTP binding domain THIVI_RS20290 PF03144 Elongation factor Tu domain 2 THIVI_RS20290 PF03143 Elongation factor Tu C-terminal domain THIVI_RS20295 PF00338 Ribosomal protein S10p/S20e THIVI_RS20300 PF00297 Ribosomal protein L3 THIVI_RS20305 PF00573 Ribosomal protein L4/L1 family THIVI_RS20310 PF00276 Ribosomal protein L23 THIVI_RS20315 PF03947 Ribosomal Proteins L2, C-terminal domain THIVI_RS20315 PF00181 Ribosomal Proteins L2, RNA binding domain THIVI_RS20320 PF00203 Ribosomal protein S19 THIVI_RS20325 PF00237 Ribosomal protein L22p/L17e THIVI_RS20330 PF07650 KH domain THIVI_RS20330 PF00189 Ribosomal protein S3, C-terminal domain THIVI_RS20335 PF00252 Ribosomal protein L16p/L10e THIVI_RS20340 PF00831 Ribosomal L29 protein THIVI_RS20345 PF00366 Ribosomal protein S17 THIVI_RS20350 PF00238 Ribosomal protein L14p/L23e THIVI_RS20355 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 THIVI_RS20355 PF00467 KOW motif THIVI_RS20360 PF00673 ribosomal L5P family C-terminus THIVI_RS20360 PF00281 Ribosomal protein L5 THIVI_RS20365 PF00253 Ribosomal protein S14p/S29e THIVI_RS20370 PF00410 Ribosomal protein S8 THIVI_RS20375 PF00347 Ribosomal protein L6 THIVI_RS20380 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast THIVI_RS20385 PF00333 Ribosomal protein S5, N-terminal domain THIVI_RS20385 PF03719 Ribosomal protein S5, C-terminal domain THIVI_RS20390 PF00327 Ribosomal protein L30p/L7e THIVI_RS20395 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A THIVI_RS20400 PF00344 SecY translocase THIVI_RS20405 PF00416 Ribosomal protein S13/S18 THIVI_RS20410 PF00411 Ribosomal protein S11 THIVI_RS20415 PF00163 Ribosomal protein S4/S9 N-terminal domain THIVI_RS20415 PF01479 S4 domain THIVI_RS20420 PF01000 RNA polymerase Rpb3/RpoA insert domain THIVI_RS20420 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain THIVI_RS20420 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain THIVI_RS20425 PF01196 Ribosomal protein L17 THIVI_RS20450 PF01966 HD domain THIVI_RS20450 PF01743 Poly A polymerase head domain THIVI_RS20450 PF12627 Probable RNA and SrmB- binding site of polymerase A THIVI_RS20455 PF00563 EAL domain THIVI_RS20455 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS20455 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS20475 PF07728 AAA domain (dynein-related subfamily) THIVI_RS20475 PF08406 CbbQ/NirQ/NorQ C-terminal THIVI_RS20480 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain THIVI_RS20480 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain THIVI_RS20485 PF13609 Gram-negative porin THIVI_RS20490 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) THIVI_RS20495 PF03264 NapC/NirT cytochrome c family, N-terminal region THIVI_RS20500 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) THIVI_RS20505 PF13237 4Fe-4S dicluster domain THIVI_RS20505 PF12801 4Fe-4S binding domain THIVI_RS20510 PF12838 4Fe-4S dicluster domain THIVI_RS20510 PF12800 4Fe-4S binding domain THIVI_RS20515 PF00384 Molybdopterin oxidoreductase THIVI_RS20515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain THIVI_RS20515 PF01568 Molydopterin dinucleotide binding domain THIVI_RS20515 PF10518 TAT (twin-arginine translocation) pathway signal sequence THIVI_RS20530 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term THIVI_RS20530 PF07730 Histidine kinase THIVI_RS20530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS20530 PF00672 HAMP domain THIVI_RS20535 PF00196 Bacterial regulatory proteins, luxR family THIVI_RS20535 PF00072 Response regulator receiver domain THIVI_RS20540 PF13537 Glutamine amidotransferase domain THIVI_RS20540 PF00733 Asparagine synthase THIVI_RS20560 PF01522 Polysaccharide deacetylase THIVI_RS20570 PF13614 AAA domain THIVI_RS20580 PF02563 Polysaccharide biosynthesis/export protein THIVI_RS20585 PF00158 Sigma-54 interaction domain THIVI_RS20585 PF02954 Bacterial regulatory protein, Fis family THIVI_RS20585 PF00072 Response regulator receiver domain THIVI_RS20590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS20590 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS20640 PF01609 Transposase DDE domain THIVI_RS20640 PF13808 DDE_Tnp_1-associated THIVI_RS20650 PF14461 Prokaryotic E2 family B THIVI_RS20650 PF00899 ThiF family THIVI_RS20665 PF13180 PDZ domain THIVI_RS20670 PF00158 Sigma-54 interaction domain THIVI_RS20670 PF02954 Bacterial regulatory protein, Fis family THIVI_RS20670 PF13185 GAF domain THIVI_RS20680 PF02397 Bacterial sugar transferase THIVI_RS20700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THIVI_RS20700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain THIVI_RS20700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain THIVI_RS20705 PF02350 UDP-N-acetylglucosamine 2-epimerase THIVI_RS20720 PF00682 HMGL-like THIVI_RS20745 PF03206 Nitrogen fixation protein NifW THIVI_RS20750 PF04319 NifZ domain THIVI_RS20755 PF00639 PPIC-type PPIASE domain THIVI_RS20760 PF07724 AAA domain (Cdc48 subfamily) THIVI_RS20760 PF06689 ClpX C4-type zinc finger THIVI_RS20760 PF10431 C-terminal, D2-small domain, of ClpB protein THIVI_RS20765 PF00849 RNA pseudouridylate synthase THIVI_RS20765 PF01479 S4 domain THIVI_RS20780 PF16193 AAA C-terminal domain THIVI_RS20780 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS20780 PF12002 MgsA AAA+ ATPase C terminal THIVI_RS20785 PF03548 Outer membrane lipoprotein carrier protein LolA THIVI_RS20795 PF09397 Ftsk gamma domain THIVI_RS20795 PF01580 FtsK/SpoIIIE family THIVI_RS20795 PF17854 FtsK alpha domain THIVI_RS20795 PF13491 4TM region of DNA translocase FtsK/SpoIIIE THIVI_RS20800 PF16736 Single Cache-like THIVI_RS20800 PF00989 PAS fold THIVI_RS20800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS20800 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS20805 PF00072 Response regulator receiver domain THIVI_RS20805 PF01627 Hpt domain THIVI_RS20805 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS20805 PF00672 HAMP domain THIVI_RS20805 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS20805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS20810 PF00313 'Cold-shock' DNA-binding domain THIVI_RS20815 PF00814 Glycoprotease family THIVI_RS20825 PF00294 pfkB family carbohydrate kinase THIVI_RS20840 PF00005 ABC transporter THIVI_RS20840 PF00664 ABC transporter transmembrane region THIVI_RS20845 PF00664 ABC transporter transmembrane region THIVI_RS20845 PF00005 ABC transporter THIVI_RS20850 PF05685 Putative restriction endonuclease THIVI_RS20860 PF05816 Toxic anion resistance protein (TelA) THIVI_RS20865 PF00886 Ribosomal protein S16 THIVI_RS20870 PF05239 PRC-barrel domain THIVI_RS20870 PF01782 RimM N-terminal domain THIVI_RS20875 PF01746 tRNA (Guanine-1)-methyltransferase THIVI_RS20880 PF01245 Ribosomal protein L19 THIVI_RS20885 PF00929 Exonuclease THIVI_RS20885 PF08411 Exonuclease C-terminal THIVI_RS20890 PF01980 tRNA-methyltransferase O THIVI_RS20890 PF18389 TrmO C-terminal domain THIVI_RS20895 PF05958 tRNA (Uracil-5-)-methyltransferase THIVI_RS20895 PF01938 TRAM domain THIVI_RS20905 PF01928 CYTH domain THIVI_RS20910 PF01476 LysM domain THIVI_RS20910 PF03734 L,D-transpeptidase catalytic domain THIVI_RS20915 PF00483 Nucleotidyl transferase THIVI_RS20920 PF01676 Metalloenzyme superfamily THIVI_RS20920 PF06415 BPG-independent PGAM N-terminus (iPGM_N) THIVI_RS20925 PF00303 Thymidylate synthase THIVI_RS20935 PF00202 Aminotransferase class-III THIVI_RS20935 PF04055 Radical SAM superfamily THIVI_RS20935 PF06968 Biotin and Thiamin Synthesis associated domain THIVI_RS20950 PF00072 Response regulator receiver domain THIVI_RS20950 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS20955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS20960 PF18273 Type III R-M EcoP15I C-terminal domain THIVI_RS20960 PF01555 DNA methylase THIVI_RS20980 PF04221 RelB antitoxin THIVI_RS20985 PF08774 VRR-NUC domain THIVI_RS20985 PF04851 Type III restriction enzyme, res subunit THIVI_RS20990 PF16363 GDP-mannose 4,6 dehydratase THIVI_RS21000 PF03937 Flavinator of succinate dehydrogenase THIVI_RS21005 PF09820 Predicted AAA-ATPase THIVI_RS21005 PF08011 PD-(D/E)XK nuclease superfamily THIVI_RS21010 PF13085 2Fe-2S iron-sulfur cluster binding domain THIVI_RS21020 PF02910 Fumarate reductase flavoprotein C-term THIVI_RS21020 PF00890 FAD binding domain THIVI_RS21025 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit THIVI_RS21040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS21040 PF01751 Toprim domain THIVI_RS21040 PF00204 DNA gyrase B THIVI_RS21040 PF00986 DNA gyrase B subunit, carboxyl terminus THIVI_RS21045 PF02769 AIR synthase related protein, C-terminal domain THIVI_RS21045 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain THIVI_RS21045 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal THIVI_RS21060 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase THIVI_RS21080 PF18030 RimK PreATP-grasp domain THIVI_RS21080 PF08443 RimK-like ATP-grasp domain THIVI_RS21095 PF00873 AcrB/AcrD/AcrF family THIVI_RS21100 PF01541 GIY-YIG catalytic domain THIVI_RS21100 PF08459 UvrC Helix-hairpin-helix N-terminal THIVI_RS21100 PF02151 UvrB/uvrC motif THIVI_RS21105 PF01066 CDP-alcohol phosphatidyltransferase THIVI_RS21135 PF00239 Resolvase, N terminal domain THIVI_RS21135 PF02796 Helix-turn-helix domain of resolvase THIVI_RS21155 PF13276 HTH-like domain THIVI_RS21155 PF13333 Integrase core domain THIVI_RS21155 PF00665 Integrase core domain THIVI_RS21250 PF00216 Bacterial DNA-binding protein THIVI_RS21360 PF04233 Phage Mu protein F like protein THIVI_RS21495 PF00156 Phosphoribosyl transferase domain THIVI_RS21500 PF01048 Phosphorylase superfamily THIVI_RS21520 PF02954 Bacterial regulatory protein, Fis family THIVI_RS21520 PF00072 Response regulator receiver domain THIVI_RS21520 PF00158 Sigma-54 interaction domain THIVI_RS21525 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS21525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS21525 PF00989 PAS fold THIVI_RS21570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS21570 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS21575 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS21575 PF00072 Response regulator receiver domain THIVI_RS21580 PF01545 Cation efflux family THIVI_RS21580 PF16916 Dimerisation domain of Zinc Transporter THIVI_RS21600 PF00175 Oxidoreductase NAD-binding domain THIVI_RS21600 PF00042 Globin THIVI_RS21600 PF00970 Oxidoreductase FAD-binding domain THIVI_RS21625 PF00072 Response regulator receiver domain THIVI_RS21625 PF00486 Transcriptional regulatory protein, C terminal THIVI_RS21630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS21635 PF00756 Putative esterase THIVI_RS21640 PF17176 tRNA-binding domain THIVI_RS21640 PF08351 Domain of unknown function (DUF1726) THIVI_RS21640 PF13718 GNAT acetyltransferase 2 THIVI_RS21640 PF05127 Helicase THIVI_RS21655 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THIVI_RS21655 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS21655 PF10518 TAT (twin-arginine translocation) pathway signal sequence THIVI_RS21670 PF03264 NapC/NirT cytochrome c family, N-terminal region THIVI_RS21685 PF08323 Starch synthase catalytic domain THIVI_RS21685 PF00534 Glycosyl transferases group 1 THIVI_RS21690 PF06470 SMC proteins Flexible Hinge Domain THIVI_RS21690 PF02463 RecF/RecN/SMC N terminal domain THIVI_RS21695 PF04354 ZipA, C-terminal FtsZ-binding domain THIVI_RS21700 PF12826 Helix-hairpin-helix motif THIVI_RS21700 PF03119 NAD-dependent DNA ligase C4 zinc finger domain THIVI_RS21700 PF00533 BRCA1 C Terminus (BRCT) domain THIVI_RS21700 PF01653 NAD-dependent DNA ligase adenylation domain THIVI_RS21700 PF03120 NAD-dependent DNA ligase OB-fold domain THIVI_RS21710 PF00194 Eukaryotic-type carbonic anhydrase THIVI_RS21725 PF00141 Peroxidase THIVI_RS21740 PF00232 Glycosyl hydrolase family 1 THIVI_RS21745 PF00005 ABC transporter THIVI_RS21745 PF06472 ABC transporter transmembrane region 2 THIVI_RS21755 PF00483 Nucleotidyl transferase THIVI_RS21780 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS21785 PF05199 GMC oxidoreductase THIVI_RS21785 PF00732 GMC oxidoreductase THIVI_RS21790 PF11756 Nitrous oxide-stimulated promoter THIVI_RS21800 PF01609 Transposase DDE domain THIVI_RS21800 PF13808 DDE_Tnp_1-associated THIVI_RS21805 PF13808 DDE_Tnp_1-associated THIVI_RS21805 PF01609 Transposase DDE domain THIVI_RS21820 PF01867 CRISPR associated protein Cas1 THIVI_RS21825 PF05685 Putative restriction endonuclease THIVI_RS21880 PF05681 Fumarate hydratase (Fumerase) THIVI_RS21880 PF05683 Fumarase C-terminus THIVI_RS21885 PF04337 Protein of unknown function, DUF480 THIVI_RS21890 PF00919 Uncharacterized protein family UPF0004 THIVI_RS21890 PF04055 Radical SAM superfamily THIVI_RS21890 PF18693 TRAM domain THIVI_RS21895 PF02401 LytB protein THIVI_RS21905 PF01568 Molydopterin dinucleotide binding domain THIVI_RS21905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain THIVI_RS21905 PF00384 Molybdopterin oxidoreductase THIVI_RS21910 PF12800 4Fe-4S binding domain THIVI_RS21910 PF13247 4Fe-4S dicluster domain THIVI_RS21915 PF04976 DMSO reductase anchor subunit (DmsC) THIVI_RS21925 PF03797 Autotransporter beta-domain THIVI_RS21925 PF00657 GDSL-like Lipase/Acylhydrolase THIVI_RS21965 PF04356 Protein of unknown function (DUF489) THIVI_RS21975 PF00561 alpha/beta hydrolase fold THIVI_RS21985 PF01875 Memo-like protein THIVI_RS21990 PF07963 Prokaryotic N-terminal methylation motif THIVI_RS21990 PF00114 Pilin (bacterial filament) THIVI_RS22000 PF14718 Soluble lytic murein transglycosylase L domain THIVI_RS22000 PF01464 Transglycosylase SLT domain THIVI_RS22010 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system THIVI_RS22020 PF01925 Sulfite exporter TauE/SafE THIVI_RS22035 PF00873 AcrB/AcrD/AcrF family THIVI_RS22040 PF13533 Biotin-lipoyl like THIVI_RS22045 PF01209 ubiE/COQ5 methyltransferase family THIVI_RS22050 PF03989 DNA gyrase C-terminal domain, beta-propeller THIVI_RS22050 PF00521 DNA gyrase/topoisomerase IV, subunit A THIVI_RS22060 PF08331 Domain of unknown function (DUF1730) THIVI_RS22075 PF00361 Proton-conducting membrane transporter THIVI_RS22085 PF01292 Prokaryotic cytochrome b561 THIVI_RS22090 PF00271 Helicase conserved C-terminal domain THIVI_RS22090 PF12137 RNA polymerase recycling family C-terminal THIVI_RS22090 PF00176 SNF2 family N-terminal domain THIVI_RS22090 PF18339 RapA N-terminal Tudor like domain 1 THIVI_RS22090 PF18337 RapA N-terminal Tudor like domain THIVI_RS22100 PF00180 Isocitrate/isopropylmalate dehydrogenase THIVI_RS22105 PF00313 'Cold-shock' DNA-binding domain THIVI_RS22110 PF02617 ATP-dependent Clp protease adaptor protein ClpS THIVI_RS22115 PF10431 C-terminal, D2-small domain, of ClpB protein THIVI_RS22115 PF02861 Clp amino terminal domain, pathogenicity island component THIVI_RS22115 PF17871 AAA lid domain THIVI_RS22115 PF07724 AAA domain (Cdc48 subfamily) THIVI_RS22115 PF00004 ATPase family associated with various cellular activities (AAA) THIVI_RS22125 PF07992 Pyridine nucleotide-disulphide oxidoreductase THIVI_RS22125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THIVI_RS22130 PF08534 Redoxin THIVI_RS22130 PF00462 Glutaredoxin THIVI_RS22140 PF02685 Glucokinase THIVI_RS22145 PF00403 Heavy-metal-associated domain THIVI_RS22150 PF07244 Surface antigen variable number repeat THIVI_RS22150 PF01103 Surface antigen THIVI_RS22150 PF17243 POTRA domain TamA domain 1 THIVI_RS22155 PF04357 TamB, inner membrane protein subunit of TAM complex THIVI_RS22160 PF03279 Bacterial lipid A biosynthesis acyltransferase THIVI_RS22170 PF03976 Polyphosphate kinase 2 (PPK2) THIVI_RS22180 PF01037 Lrp/AsnC ligand binding domain THIVI_RS22185 PF08502 LeuA allosteric (dimerisation) domain THIVI_RS22185 PF00682 HMGL-like THIVI_RS22195 PF01966 HD domain THIVI_RS22195 PF11871 Domain of unknown function (DUF3391) THIVI_RS22200 PF02463 RecF/RecN/SMC N terminal domain THIVI_RS22205 PF01513 ATP-NAD kinase THIVI_RS22210 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding THIVI_RS22210 PF01628 HrcA protein C terminal domain THIVI_RS22215 PF01025 GrpE THIVI_RS22220 PF00012 Hsp70 protein THIVI_RS22225 PF01556 DnaJ C terminal domain THIVI_RS22225 PF00684 DnaJ central domain THIVI_RS22225 PF00226 DnaJ domain THIVI_RS22230 PF01113 Dihydrodipicolinate reductase, N-terminus THIVI_RS22230 PF05173 Dihydrodipicolinate reductase, C-terminus THIVI_RS22260 PF06114 IrrE N-terminal-like domain THIVI_RS22275 PF04851 Type III restriction enzyme, res subunit THIVI_RS22275 PF00271 Helicase conserved C-terminal domain THIVI_RS22320 PF13356 Arm DNA-binding domain THIVI_RS22320 PF00589 Phage integrase family THIVI_RS22325 PF00497 Bacterial extracellular solute-binding proteins, family 3 THIVI_RS22325 PF01464 Transglycosylase SLT domain THIVI_RS22330 PF02545 Maf-like protein THIVI_RS22340 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain THIVI_RS22340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase THIVI_RS22345 PF00128 Alpha amylase, catalytic domain THIVI_RS22345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THIVI_RS22355 PF00266 Aminotransferase class-V THIVI_RS22365 PF00149 Calcineurin-like phosphoesterase THIVI_RS22370 PF13514 AAA domain THIVI_RS22380 PF02620 Large ribosomal RNA subunit accumulation protein YceD THIVI_RS22390 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22390 PF17149 Periplasmic sensor domain found in signal transduction proteins THIVI_RS22390 PF00072 Response regulator receiver domain THIVI_RS22390 PF01627 Hpt domain THIVI_RS22390 PF00672 HAMP domain THIVI_RS22390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22395 PF08448 PAS fold THIVI_RS22395 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS22425 PF00563 EAL domain THIVI_RS22425 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS22425 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS22430 PF00989 PAS fold THIVI_RS22430 PF16736 Single Cache-like THIVI_RS22430 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22435 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) THIVI_RS22435 PF06594 Haemolysin-type calcium binding protein related domain THIVI_RS22445 PF07196 Flagellin hook IN motif THIVI_RS22445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THIVI_RS22445 PF07196 Flagellin hook IN motif THIVI_RS22445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THIVI_RS22450 PF00072 Response regulator receiver domain THIVI_RS22450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS22450 PF01627 Hpt domain THIVI_RS22450 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22450 PF00672 HAMP domain THIVI_RS22460 PF05992 SbmA/BacA-like family THIVI_RS22490 PF01627 Hpt domain THIVI_RS22490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS22490 PF00672 HAMP domain THIVI_RS22490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22490 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22490 PF00072 Response regulator receiver domain THIVI_RS22495 PF00672 HAMP domain THIVI_RS22495 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22495 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS22495 PF01627 Hpt domain THIVI_RS22495 PF00072 Response regulator receiver domain THIVI_RS22500 PF01627 Hpt domain THIVI_RS22500 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS22500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22500 PF00672 HAMP domain THIVI_RS22500 PF00072 Response regulator receiver domain THIVI_RS22505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22505 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22505 PF01627 Hpt domain THIVI_RS22505 PF00072 Response regulator receiver domain THIVI_RS22510 PF00069 Protein kinase domain THIVI_RS22535 PF13614 AAA domain THIVI_RS22545 PF01627 Hpt domain THIVI_RS22545 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22545 PF00072 Response regulator receiver domain THIVI_RS22545 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS22545 PF00672 HAMP domain THIVI_RS22545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22550 PF00072 Response regulator receiver domain THIVI_RS22550 PF00672 HAMP domain THIVI_RS22550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22550 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS22550 PF01627 Hpt domain THIVI_RS22550 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22565 PF00563 EAL domain THIVI_RS22565 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS22565 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS22575 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS22575 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS22575 PF00563 EAL domain THIVI_RS22580 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS22580 PF00563 EAL domain THIVI_RS22580 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS22585 PF00072 Response regulator receiver domain THIVI_RS22605 PF00563 EAL domain THIVI_RS22605 PF12792 CSS motif domain associated with EAL THIVI_RS22610 PF00271 Helicase conserved C-terminal domain THIVI_RS22610 PF08494 DEAD/H associated THIVI_RS22610 PF00270 DEAD/DEAH box helicase THIVI_RS22615 PF00589 Phage integrase family THIVI_RS22640 PF01476 LysM domain THIVI_RS22640 PF01551 Peptidase family M23 THIVI_RS22640 PF08525 Opacity-associated protein A N-terminal motif THIVI_RS22675 PF01590 GAF domain THIVI_RS22675 PF00158 Sigma-54 interaction domain THIVI_RS22675 PF02954 Bacterial regulatory protein, Fis family THIVI_RS22685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS22685 PF00672 HAMP domain THIVI_RS22685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22685 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22685 PF01627 Hpt domain THIVI_RS22685 PF00072 Response regulator receiver domain THIVI_RS22690 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22690 PF00672 HAMP domain THIVI_RS22690 PF00072 Response regulator receiver domain THIVI_RS22690 PF01627 Hpt domain THIVI_RS22690 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS22725 PF16697 Inner membrane component of T3SS, cytoplasmic domain THIVI_RS22740 PF00069 Protein kinase domain THIVI_RS22740 PF03793 PASTA domain THIVI_RS22750 PF01467 Cytidylyltransferase-like THIVI_RS22750 PF00294 pfkB family carbohydrate kinase THIVI_RS22755 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22755 PF08446 PAS fold THIVI_RS22755 PF00360 Phytochrome region THIVI_RS22755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22755 PF01590 GAF domain THIVI_RS22760 PF01464 Transglycosylase SLT domain THIVI_RS22785 PF00360 Phytochrome region THIVI_RS22785 PF08446 PAS fold THIVI_RS22785 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22785 PF01590 GAF domain THIVI_RS22800 PF00072 Response regulator receiver domain THIVI_RS22800 PF01627 Hpt domain THIVI_RS22800 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THIVI_RS22805 PF00672 HAMP domain THIVI_RS22805 PF17200 Single Cache domain 2 THIVI_RS22810 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS22815 PF00691 OmpA family THIVI_RS22830 PF01695 IstB-like ATP binding protein THIVI_RS22840 PF00665 Integrase core domain THIVI_RS22845 PF00535 Glycosyl transferase family 2 THIVI_RS22850 PF03707 Bacterial signalling protein N terminal repeat THIVI_RS22850 PF00990 Diguanylate cyclase, GGDEF domain THIVI_RS22850 PF00563 EAL domain THIVI_RS22855 PF00498 FHA domain THIVI_RS22855 PF00005 ABC transporter THIVI_RS22855 PF01061 ABC-2 type transporter THIVI_RS22880 PF01609 Transposase DDE domain THIVI_RS22890 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS22890 PF13426 PAS domain THIVI_RS22890 PF00072 Response regulator receiver domain THIVI_RS22890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS22890 PF08448 PAS fold THIVI_RS22935 PF01695 IstB-like ATP binding protein THIVI_RS22950 PF03793 PASTA domain THIVI_RS22950 PF00069 Protein kinase domain THIVI_RS22975 PF05069 Phage virion morphogenesis family THIVI_RS23000 PF00571 CBS domain THIVI_RS23000 PF00005 ABC transporter THIVI_RS23010 PF18273 Type III R-M EcoP15I C-terminal domain THIVI_RS23010 PF01555 DNA methylase THIVI_RS23030 PF01627 Hpt domain THIVI_RS23030 PF00072 Response regulator receiver domain THIVI_RS23030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS23030 PF00672 HAMP domain THIVI_RS23030 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS23030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS23035 PF00149 Calcineurin-like phosphoesterase THIVI_RS23035 PF02872 5'-nucleotidase, C-terminal domain THIVI_RS23050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III THIVI_RS23055 PF00672 HAMP domain THIVI_RS23055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS23055 PF00512 His Kinase A (phospho-acceptor) domain THIVI_RS23055 PF01627 Hpt domain THIVI_RS23055 PF00072 Response regulator receiver domain THIVI_RS23055 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THIVI_RS23070 PF00497 Bacterial extracellular solute-binding proteins, family 3 THIVI_RS23075 PF05231 MASE1 THIVI_RS23075 PF07730 Histidine kinase THIVI_RS23075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THIVI_RS23080 PF13401 AAA domain THIVI_RS23080 PF01471 Putative peptidoglycan binding domain THIVI_RS23100 PF00072 Response regulator receiver domain THIVI_RS23115 PF09669 Phage regulatory protein Rha (Phage_pRha) THIVI_RS23115 PF10549 ORF11CD3 domain THIVI_RS23145 PF03793 PASTA domain THIVI_RS23145 PF00069 Protein kinase domain