locus-tag class description THIMO_RS00015 IPR003593 AAA+ ATPase domain THIMO_RS00015 IPR013159 Chromosomal replication initiator, DnaA C-terminal THIMO_RS00015 IPR013317 Chromosomal replication initiator protein DnaA THIMO_RS00015 IPR018312 Chromosomal replication control, initiator DnaA, conserved site THIMO_RS00015 IPR020591 Chromosomal replication control, initiator DnaA-like THIMO_RS00015 IPR001957 Chromosomal replication control, initiator DnaA THIMO_RS00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00015 IPR010921 Trp repressor/replication initiator THIMO_RS00015 IPR038454 DnaA, N-terminal domain superfamily THIMO_RS00015 IPR024633 DnaA N-terminal domain THIMO_RS00020 IPR001001 DNA polymerase III, beta sliding clamp THIMO_RS00020 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal THIMO_RS00020 IPR022637 DNA polymerase III, beta sliding clamp, central THIMO_RS00020 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal THIMO_RS00025 IPR013704 Uncharacterised protein family UPF0313, N-terminal THIMO_RS00025 IPR006638 Elp3/MiaB/NifB THIMO_RS00025 IPR020612 Methylthiotransferase, conserved site THIMO_RS00025 IPR007197 Radical SAM THIMO_RS00025 IPR023404 Radical SAM, alpha/beta horseshoe THIMO_RS00025 IPR022946 Uncharacterised protein family UPF0313 THIMO_RS00025 IPR024560 Uncharacterised protein family UPF0313, C-terminal THIMO_RS00030 IPR017806 Ergothioneine biosynthesis protein EgtB THIMO_RS00030 IPR005532 Sulfatase-modifying factor enzyme THIMO_RS00030 IPR034660 DinB/YfiT-like putative metalloenzymes THIMO_RS00030 IPR032890 Hercynine oxygenase, Actinobacteria THIMO_RS00030 IPR024775 DinB-like domain THIMO_RS00030 IPR016187 C-type lectin fold THIMO_RS00030 IPR042095 Sulfatase-modifying factor enzyme superfamily THIMO_RS00035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS00035 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type THIMO_RS00035 IPR019257 Histidine-specific methyltransferase, SAM-dependent THIMO_RS00035 IPR035094 Histidine N-alpha-methyltransferase THIMO_RS00035 IPR017804 Methyltransferase EgtD-like THIMO_RS00045 IPR024474 Zinc-finger binding domain of transposase IS66 THIMO_RS00045 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00045 IPR024463 Transposase TnpC, homeodomain THIMO_RS00045 IPR039552 Transposase IS66, C-terminal THIMO_RS00045 IPR004291 Transposase, IS66 THIMO_RS00075 IPR001173 Glycosyltransferase 2-like THIMO_RS00075 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS00080 IPR001296 Glycosyl transferase, family 1 THIMO_RS00080 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THIMO_RS00120 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS00120 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS00120 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS00120 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THIMO_RS00150 IPR001451 Hexapeptide repeat THIMO_RS00150 IPR011004 Trimeric LpxA-like superfamily THIMO_RS00155 IPR004104 Oxidoreductase, C-terminal THIMO_RS00155 IPR036291 NAD(P)-binding domain superfamily THIMO_RS00155 IPR000683 Oxidoreductase, N-terminal THIMO_RS00165 IPR002716 PIN domain THIMO_RS00165 IPR022907 VapC family THIMO_RS00165 IPR029060 PIN-like domain superfamily THIMO_RS00165 IPR006226 PIN domain toxin THIMO_RS00175 IPR001626 ABC transporter, TroCD-like THIMO_RS00175 IPR037294 ABC transporter, BtuC-like THIMO_RS00180 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00180 IPR017871 ABC transporter, conserved site THIMO_RS00180 IPR003439 ABC transporter-like THIMO_RS00180 IPR003593 AAA+ ATPase domain THIMO_RS00185 IPR035520 High-affinity zinc uptake system protein ZnuA THIMO_RS00185 IPR006127 Periplasmic solute binding protein, ZnuA-like THIMO_RS00190 IPR011104 HPr kinase/phosphorylase, C-terminal THIMO_RS00190 IPR003755 HPr(Ser) kinase/phosphorylase THIMO_RS00190 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal THIMO_RS00190 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily THIMO_RS00195 IPR042181 Type II secretion system, protein E, N-terminal THIMO_RS00195 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00195 IPR001482 Type II/IV secretion system protein THIMO_RS00195 IPR037257 General secretory system II, protein E, N-terminal superfamily THIMO_RS00195 IPR013369 Type II secretion system GspE THIMO_RS00195 IPR007831 General secretory system II, protein E, N-terminal THIMO_RS00195 IPR003593 AAA+ ATPase domain THIMO_RS00200 IPR003004 GspF/PilC family THIMO_RS00200 IPR001992 Type II secretion system conserved site THIMO_RS00200 IPR042094 Type II secretion system F domain superfamily THIMO_RS00200 IPR018076 Type II secretion system F domain THIMO_RS00205 IPR000983 Bacterial general secretion pathway protein G-type pilin THIMO_RS00205 IPR010054 General secretion pathway protein G THIMO_RS00205 IPR013545 Type II secretion system protein G THIMO_RS00205 IPR012902 Prokaryotic N-terminal methylation site THIMO_RS00210 IPR002416 Type II secretion system protein H THIMO_RS00210 IPR022346 General secretion pathway, GspH THIMO_RS00215 IPR010052 Type II secretion system protein I THIMO_RS00215 IPR012902 Prokaryotic N-terminal methylation site THIMO_RS00225 IPR038072 GspK, central domain superfamily THIMO_RS00225 IPR005628 General secretion pathway protein K THIMO_RS00230 IPR007813 Fimbrial assembly PilN THIMO_RS00245 IPR005644 NolW-like THIMO_RS00245 IPR013356 Type II secretion system GspD THIMO_RS00245 IPR001775 GspD/PilQ family THIMO_RS00245 IPR004845 Type II secretion system GspD, conserved site THIMO_RS00245 IPR004846 Type II/III secretion system THIMO_RS00245 IPR038591 NolW-like superfamily THIMO_RS00250 IPR004147 UbiB domain THIMO_RS00250 IPR010232 Probable protein kinase UbiB THIMO_RS00250 IPR011009 Protein kinase-like domain superfamily THIMO_RS00255 IPR003033 SCP2 sterol-binding domain THIMO_RS00255 IPR038989 Ubiquinone biosynthesis protein UbiJ THIMO_RS00255 IPR036527 SCP2 sterol-binding domain superfamily THIMO_RS00260 IPR004033 UbiE/COQ5 methyltransferase THIMO_RS00260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS00260 IPR023576 UbiE/COQ5 methyltransferase, conserved site THIMO_RS00265 IPR004815 Lon protease, bacterial/eukaryotic-type THIMO_RS00265 IPR015947 PUA-like superfamily THIMO_RS00265 IPR008268 Peptidase S16, active site THIMO_RS00265 IPR027543 Lon protease, bacterial THIMO_RS00265 IPR003111 Lon, substrate-binding domain THIMO_RS00265 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00265 IPR027065 Lon protease THIMO_RS00265 IPR008269 Peptidase S16, Lon proteolytic domain THIMO_RS00265 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS00265 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS00265 IPR003593 AAA+ ATPase domain THIMO_RS00265 IPR003959 ATPase, AAA-type, core THIMO_RS00275 IPR004563 Apolipoprotein N-acyltransferase THIMO_RS00275 IPR003010 Carbon-nitrogen hydrolase THIMO_RS00275 IPR036526 Carbon-nitrogen hydrolase superfamily THIMO_RS00290 IPR005757 Murein peptide ligase THIMO_RS00290 IPR004101 Mur ligase, C-terminal THIMO_RS00290 IPR000713 Mur ligase, N-terminal catalytic domain THIMO_RS00290 IPR013221 Mur ligase, central THIMO_RS00290 IPR036615 Mur ligase, C-terminal domain superfamily THIMO_RS00290 IPR036565 Mur-like, catalytic domain superfamily THIMO_RS00295 IPR003382 Flavoprotein THIMO_RS00295 IPR036551 Flavin prenyltransferase-like THIMO_RS00295 IPR004507 Flavin prenyltransferase UbiX-like THIMO_RS00300 IPR023346 Lysozyme-like domain superfamily THIMO_RS00300 IPR000726 Glycoside hydrolase, family 19, catalytic THIMO_RS00320 IPR032816 SNARE associated Golgi protein THIMO_RS00320 IPR032818 DedA family THIMO_RS00325 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS00325 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase THIMO_RS00325 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS00325 IPR005814 Aminotransferase class-III THIMO_RS00325 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS00330 IPR036206 Thiamin phosphate synthase superfamily THIMO_RS00330 IPR034291 Thiamine phosphate synthase THIMO_RS00330 IPR022998 Thiamine phosphate synthase/TenI THIMO_RS00330 IPR013785 Aldolase-type TIM barrel THIMO_RS00335 IPR013785 Aldolase-type TIM barrel THIMO_RS00335 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase THIMO_RS00335 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase THIMO_RS00335 IPR029056 Ribokinase-like THIMO_RS00335 IPR034291 Thiamine phosphate synthase THIMO_RS00335 IPR036206 Thiamin phosphate synthase superfamily THIMO_RS00335 IPR022998 Thiamine phosphate synthase/TenI THIMO_RS00340 IPR024935 Rubredoxin domain THIMO_RS00340 IPR024934 Rubredoxin-like domain THIMO_RS00340 IPR024922 Rubredoxin THIMO_RS00340 IPR018527 Rubredoxin, iron-binding site THIMO_RS00350 IPR017870 FeS cluster insertion, C-terminal, conserved site THIMO_RS00350 IPR035903 HesB-like domain superfamily THIMO_RS00350 IPR000361 FeS cluster biogenesis THIMO_RS00350 IPR016092 FeS cluster insertion protein THIMO_RS00350 IPR023063 FeS cluster insertion protein ErpA THIMO_RS00355 IPR000534 Semialdehyde dehydrogenase, NAD-binding THIMO_RS00355 IPR012280 Semialdehyde dehydrogenase, dimerisation domain THIMO_RS00355 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 THIMO_RS00355 IPR036291 NAD(P)-binding domain superfamily THIMO_RS00355 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site THIMO_RS00360 IPR005753 DNA helicase, ATP-dependent, UvrD type THIMO_RS00360 IPR014017 UvrD-like DNA helicase, C-terminal THIMO_RS00360 IPR014016 UvrD-like helicase, ATP-binding domain THIMO_RS00360 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00360 IPR000212 DNA helicase, UvrD/REP type THIMO_RS00360 IPR034739 UvrD/AddA helicase, N-terminal THIMO_RS00360 IPR013986 DExx box DNA helicase domain superfamily THIMO_RS00365 IPR018389 TRAP transporter solute receptor DctP/TeaA THIMO_RS00365 IPR041722 Alpha-keto acid binding periplasmic protein THIMO_RS00365 IPR026289 Solute binding protein, TakP-like THIMO_RS00365 IPR038404 TRAP transporter solute receptor DctP superfamily THIMO_RS00370 IPR023404 Radical SAM, alpha/beta horseshoe THIMO_RS00370 IPR010723 HemN, C-terminal THIMO_RS00370 IPR007197 Radical SAM THIMO_RS00370 IPR004559 Heme chaperone HemW-like THIMO_RS00370 IPR006638 Elp3/MiaB/NifB THIMO_RS00370 IPR034505 Anaerobic coproporphyrinogen-III oxidase THIMO_RS00375 IPR042105 Ribosomal protein L31 superfamily THIMO_RS00375 IPR002150 Ribosomal protein L31 THIMO_RS00375 IPR034704 L28p-like THIMO_RS00375 IPR027491 Ribosomal protein L31 type A THIMO_RS00380 IPR019810 Citrate synthase active site THIMO_RS00380 IPR002020 Citrate synthase THIMO_RS00380 IPR016142 Citrate synthase-like, large alpha subdomain THIMO_RS00380 IPR010953 Citrate synthase, type I THIMO_RS00380 IPR036969 Citrate synthase superfamily THIMO_RS00380 IPR016143 Citrate synthase-like, small alpha subdomain THIMO_RS00380 IPR024176 Citrate synthase, bacterial-type THIMO_RS00390 IPR005883 Type IV pilus assembly protein PilM THIMO_RS00390 IPR003494 SHS2 domain inserted in FtsA THIMO_RS00395 IPR007813 Fimbrial assembly PilN THIMO_RS00400 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 THIMO_RS00400 IPR007445 Pilus assembly protein, PilO THIMO_RS00410 IPR021731 AMIN domain THIMO_RS00410 IPR001775 GspD/PilQ family THIMO_RS00410 IPR005644 NolW-like THIMO_RS00410 IPR038591 NolW-like superfamily THIMO_RS00410 IPR013355 Type IV pilus secretin PilQ THIMO_RS00410 IPR011662 Secretin/TonB, short N-terminal domain THIMO_RS00410 IPR004846 Type II/III secretion system THIMO_RS00410 IPR004845 Type II secretion system GspD, conserved site THIMO_RS00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00415 IPR031322 Shikimate kinase/gluconokinase THIMO_RS00415 IPR000623 Shikimate kinase/Threonine synthase-like 1 THIMO_RS00415 IPR023000 Shikimate kinase, conserved site THIMO_RS00420 IPR030960 3-dehydroquinate synthase domain THIMO_RS00420 IPR030963 3-dehydroquinate synthase family THIMO_RS00420 IPR016037 3-dehydroquinate synthase AroB THIMO_RS00425 IPR013785 Aldolase-type TIM barrel THIMO_RS00425 IPR002489 Glutamate synthase, alpha subunit, C-terminal THIMO_RS00425 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily THIMO_RS00425 IPR017932 Glutamine amidotransferase type 2 domain THIMO_RS00425 IPR006982 Glutamate synthase, central-N THIMO_RS00425 IPR002932 Glutamate synthase domain THIMO_RS00425 IPR029055 Nucleophile aminohydrolases, N-terminal THIMO_RS00430 IPR009051 Alpha-helical ferredoxin THIMO_RS00430 IPR023753 FAD/NAD(P)-binding domain THIMO_RS00430 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS00430 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 THIMO_RS00430 IPR028261 Dihydroprymidine dehydrogenase domain II THIMO_RS00435 IPR013766 Thioredoxin domain THIMO_RS00435 IPR036249 Thioredoxin-like superfamily THIMO_RS00435 IPR024706 Peroxiredoxin, AhpC-type THIMO_RS00435 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant THIMO_RS00440 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS00440 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS00440 IPR005467 Histidine kinase domain THIMO_RS00440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS00440 IPR029151 Periplasmic sensor-like domain superfamily THIMO_RS00440 IPR015387 LuxQ, periplasmic THIMO_RS00440 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS00440 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS00440 IPR011006 CheY-like superfamily THIMO_RS00440 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS00445 IPR037522 HD-GYP domain THIMO_RS00445 IPR011006 CheY-like superfamily THIMO_RS00445 IPR003607 HD/PDEase domain THIMO_RS00445 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS00455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS00455 IPR035246 Spermidine synthase, tetramerisation domain THIMO_RS00455 IPR037163 Spermidine synthase, tetramerisation domain superfamily THIMO_RS00455 IPR030374 Polyamine biosynthesis domain THIMO_RS00455 IPR030373 Polyamine biosynthesis domain, conserved site THIMO_RS00455 IPR001045 Spermidine/spermine synthases THIMO_RS00460 IPR029020 Ammonium/urea transporter THIMO_RS00460 IPR001905 Ammonium transporter THIMO_RS00460 IPR018047 Ammonium transporter, conserved site THIMO_RS00460 IPR024041 Ammonium transporter AmtB-like domain THIMO_RS00465 IPR011322 Nitrogen regulatory PII-like, alpha/beta THIMO_RS00465 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal THIMO_RS00465 IPR002187 Nitrogen regulatory protein PII THIMO_RS00465 IPR017918 Nitrogen regulatory protein PII, conserved site THIMO_RS00465 IPR002332 Nitrogen regulatory protein P-II, urydylation site THIMO_RS00480 IPR004482 Mg chelatase-related protein THIMO_RS00480 IPR025158 Mg chelatase-related protein, C-terminal domain THIMO_RS00480 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS00480 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS00480 IPR003593 AAA+ ATPase domain THIMO_RS00480 IPR000523 Magnesium chelatase ChlI domain THIMO_RS00480 IPR001208 MCM domain THIMO_RS00480 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00485 IPR032781 ABC-transporter extension domain THIMO_RS00485 IPR003593 AAA+ ATPase domain THIMO_RS00485 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00485 IPR003439 ABC transporter-like THIMO_RS00485 IPR017871 ABC transporter, conserved site THIMO_RS00490 IPR035090 Phosphorylase pyridoxal-phosphate attachment site THIMO_RS00490 IPR000811 Glycosyl transferase, family 35 THIMO_RS00490 IPR011833 Glycogen/starch/alpha-glucan phosphorylase THIMO_RS00500 IPR008915 Peptidase M50 THIMO_RS00500 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase THIMO_RS00500 IPR036034 PDZ superfamily THIMO_RS00500 IPR041489 PDZ domain 6 THIMO_RS00500 IPR001478 PDZ domain THIMO_RS00505 IPR003142 Biotin protein ligase, C-terminal THIMO_RS00505 IPR004408 Biotin--acetyl-CoA-carboxylase ligase THIMO_RS00505 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain THIMO_RS00510 IPR001633 EAL domain THIMO_RS00510 IPR035919 EAL domain superfamily THIMO_RS00510 IPR000160 GGDEF domain THIMO_RS00510 IPR005330 MHYT domain THIMO_RS00510 IPR029787 Nucleotide cyclase THIMO_RS00525 IPR019734 Tetratricopeptide repeat THIMO_RS00525 IPR030873 Beta-barrel assembly-enhancing protease THIMO_RS00525 IPR001915 Peptidase M48 THIMO_RS00525 IPR011990 Tetratricopeptide-like helical domain superfamily THIMO_RS00525 IPR013026 Tetratricopeptide repeat-containing domain THIMO_RS00540 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS00540 IPR010242 Transcription factor HTH, IscR THIMO_RS00540 IPR030489 Transcription regulator Rrf2-type, conserved site THIMO_RS00540 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS00540 IPR000944 Transcription regulator Rrf2-type THIMO_RS00555 IPR002549 Transmembrane protein TqsA-like THIMO_RS00565 IPR011335 Restriction endonuclease type II-like THIMO_RS00565 IPR008538 Domain of unknown function DUF820 THIMO_RS00570 IPR008040 Hydantoinaseoxoprolinase, N-terminal THIMO_RS00570 IPR002821 Hydantoinase A/oxoprolinase THIMO_RS00575 IPR013785 Aldolase-type TIM barrel THIMO_RS00575 IPR006219 DHAP synthase, class 1 THIMO_RS00575 IPR006218 DAHP synthetase I/KDSA THIMO_RS00580 IPR008331 Ferritin/DPS protein domain THIMO_RS00580 IPR009078 Ferritin-like superfamily THIMO_RS00580 IPR002177 DNA-binding protein Dps THIMO_RS00580 IPR023188 DNA-binding protein Dps, conserved site THIMO_RS00580 IPR012347 Ferritin-like THIMO_RS00585 IPR008136 CinA, C-terminal THIMO_RS00585 IPR001453 MoaB/Mog domain THIMO_RS00585 IPR036425 MoaB/Mog-like domain superfamily THIMO_RS00585 IPR008135 Competence-induced protein CinA THIMO_RS00585 IPR041424 CinA, KH domain THIMO_RS00585 IPR036653 CinA-like, C-terminal THIMO_RS00590 IPR029760 Glutathione peroxidase conserved site THIMO_RS00590 IPR029759 Glutathione peroxidase active site THIMO_RS00590 IPR036249 Thioredoxin-like superfamily THIMO_RS00590 IPR000889 Glutathione peroxidase THIMO_RS00595 IPR017938 Riboflavin synthase-like beta-barrel THIMO_RS00595 IPR001433 Oxidoreductase FAD/NAD(P)-binding THIMO_RS00595 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain THIMO_RS00595 IPR033892 Ferredoxin--NADP reductase, bacteria THIMO_RS00595 IPR017927 FAD-binding domain, ferredoxin reductase-type THIMO_RS00595 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain THIMO_RS00605 IPR003342 Glycosyl transferase family 39/83 THIMO_RS00610 IPR001173 Glycosyltransferase 2-like THIMO_RS00610 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS00615 IPR023728 Small heat shock protein IbpA THIMO_RS00615 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain THIMO_RS00615 IPR002068 Alpha crystallin/Hsp20 domain THIMO_RS00615 IPR008978 HSP20-like chaperone THIMO_RS00620 IPR001478 PDZ domain THIMO_RS00620 IPR001940 Peptidase S1C THIMO_RS00620 IPR009003 Peptidase S1, PA clan THIMO_RS00620 IPR011782 Peptidase S1C, Do THIMO_RS00620 IPR036034 PDZ superfamily THIMO_RS00630 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC THIMO_RS00630 IPR042245 Tgt2/MlaC superfamily THIMO_RS00640 IPR030656 Delta-aminolevulinic acid dehydratase, active site THIMO_RS00640 IPR013785 Aldolase-type TIM barrel THIMO_RS00640 IPR001731 Delta-aminolevulinic acid dehydratase THIMO_RS00645 IPR022893 Shikimate dehydrogenase family THIMO_RS00645 IPR041121 SDH, C-terminal THIMO_RS00645 IPR011342 Shikimate dehydrogenase THIMO_RS00645 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal THIMO_RS00645 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase THIMO_RS00645 IPR036291 NAD(P)-binding domain superfamily THIMO_RS00650 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site THIMO_RS00650 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THIMO_RS00650 IPR013328 6-phosphogluconate dehydrogenase, domain 2 THIMO_RS00650 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain THIMO_RS00650 IPR036291 NAD(P)-binding domain superfamily THIMO_RS00650 IPR015815 3-hydroxyisobutyrate dehydrogenase-related THIMO_RS00650 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding THIMO_RS00690 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily THIMO_RS00690 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain THIMO_RS00690 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain THIMO_RS00690 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit THIMO_RS00695 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS00695 IPR011808 Sulphite reductase, dissimilatory-type beta subunit THIMO_RS00695 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain THIMO_RS00695 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily THIMO_RS00695 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain THIMO_RS00695 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS00700 IPR017463 Sulphur relay, TusD/DsrE THIMO_RS00700 IPR027396 DsrEFH-like THIMO_RS00700 IPR003787 Sulphur relay, DsrE/F-like protein THIMO_RS00705 IPR003787 Sulphur relay, DsrE/F-like protein THIMO_RS00705 IPR027396 DsrEFH-like THIMO_RS00705 IPR017462 Sulphur relay, TusC/DsrF THIMO_RS00715 IPR042072 DsrC-like protein, C-terminal domain THIMO_RS00715 IPR025526 DsrC-like domain superfamily THIMO_RS00715 IPR007453 Sulphur transfer protein DsrC/TusE THIMO_RS00730 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 THIMO_RS00730 IPR023753 FAD/NAD(P)-binding domain THIMO_RS00730 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS00730 IPR028261 Dihydroprymidine dehydrogenase domain II THIMO_RS00730 IPR009051 Alpha-helical ferredoxin THIMO_RS00740 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS00740 IPR006311 Twin-arginine translocation pathway, signal sequence THIMO_RS00740 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS00750 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00750 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA THIMO_RS00750 IPR011698 CobB/CobQ-like glutamine amidotransferase THIMO_RS00750 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain THIMO_RS00750 IPR017929 CobB/CobQ glutamine amidotransferase THIMO_RS00750 IPR029062 Class I glutamine amidotransferase-like THIMO_RS00760 IPR002937 Amine oxidase THIMO_RS00760 IPR014105 Carotenoid/retinoid oxidoreductase THIMO_RS00760 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS00765 IPR002347 Short-chain dehydrogenase/reductase SDR THIMO_RS00765 IPR036291 NAD(P)-binding domain superfamily THIMO_RS00765 IPR020904 Short-chain dehydrogenase/reductase, conserved site THIMO_RS00775 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THIMO_RS00775 IPR001279 Metallo-beta-lactamase THIMO_RS00800 IPR013615 CbbQ/NirQ/NorQ, C-terminal THIMO_RS00800 IPR011704 ATPase, dynein-related, AAA domain THIMO_RS00800 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00810 IPR002035 von Willebrand factor, type A THIMO_RS00810 IPR036465 von Willebrand factor A-like domain superfamily THIMO_RS00820 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain THIMO_RS00820 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00820 IPR004881 Ribosome biogenesis GTPase RsgA THIMO_RS00820 IPR010914 RsgA GTPase domain THIMO_RS00830 IPR036412 HAD-like superfamily THIMO_RS00830 IPR023214 HAD superfamily THIMO_RS00830 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 THIMO_RS00830 IPR006357 HAD-superfamily hydrolase, subfamily IIA THIMO_RS00840 IPR029787 Nucleotide cyclase THIMO_RS00840 IPR005330 MHYT domain THIMO_RS00840 IPR000160 GGDEF domain THIMO_RS00840 IPR035919 EAL domain superfamily THIMO_RS00840 IPR001633 EAL domain THIMO_RS00845 IPR027413 GroEL-like equatorial domain superfamily THIMO_RS00845 IPR027409 GroEL-like apical domain superfamily THIMO_RS00845 IPR027410 TCP-1-like chaperonin intermediate domain superfamily THIMO_RS00845 IPR018370 Chaperonin Cpn60, conserved site THIMO_RS00845 IPR001844 Chaperonin Cpn60 THIMO_RS00845 IPR002423 Chaperonin Cpn60/TCP-1 family THIMO_RS00850 IPR020818 GroES chaperonin family THIMO_RS00850 IPR018369 Chaperonin GroES, conserved site THIMO_RS00850 IPR011032 GroES-like superfamily THIMO_RS00850 IPR037124 GroES chaperonin superfamily THIMO_RS00860 IPR004323 Divalent ion tolerance protein, CutA THIMO_RS00860 IPR011322 Nitrogen regulatory PII-like, alpha/beta THIMO_RS00860 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal THIMO_RS00865 IPR017937 Thioredoxin, conserved site THIMO_RS00865 IPR003834 Cytochrome C biogenesis protein, transmembrane domain THIMO_RS00865 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain THIMO_RS00865 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily THIMO_RS00865 IPR022910 Thiol:disulphide interchange protein DsbD THIMO_RS00865 IPR036249 Thioredoxin-like superfamily THIMO_RS00865 IPR013766 Thioredoxin domain THIMO_RS00865 IPR035671 DsbD gamma THIMO_RS00875 IPR001874 Dehydroquinase, class II THIMO_RS00875 IPR018509 Dehydroquinase, class II, conserved site THIMO_RS00875 IPR036441 Dehydroquinase, class II superfamily THIMO_RS00880 IPR011053 Single hybrid motif THIMO_RS00880 IPR001249 Acetyl-CoA biotin carboxyl carrier THIMO_RS00880 IPR000089 Biotin/lipoyl attachment THIMO_RS00880 IPR001882 Biotin-binding site THIMO_RS00885 IPR011054 Rudiment single hybrid motif THIMO_RS00885 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS00885 IPR005481 Biotin carboxylase-like, N-terminal domain THIMO_RS00885 IPR011764 Biotin carboxylation domain THIMO_RS00885 IPR005482 Biotin carboxylase, C-terminal THIMO_RS00885 IPR011761 ATP-grasp fold THIMO_RS00885 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase THIMO_RS00885 IPR016185 Pre-ATP-grasp domain superfamily THIMO_RS00885 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain THIMO_RS00890 IPR004498 Ribosomal protein L11 methyltransferase THIMO_RS00890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS00895 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal THIMO_RS00895 IPR032887 tRNA-dihydrouridine synthase B THIMO_RS00895 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 THIMO_RS00895 IPR001269 tRNA-dihydrouridine synthase THIMO_RS00895 IPR018517 tRNA-dihydrouridine synthase, conserved site THIMO_RS00895 IPR013785 Aldolase-type TIM barrel THIMO_RS00895 IPR035587 DUS-like, FMN-binding domain THIMO_RS00900 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS00900 IPR009057 Homeobox-like domain superfamily THIMO_RS00900 IPR005412 DNA-binding protein Fis THIMO_RS00905 IPR024051 AICAR transformylase, duplicated domain superfamily THIMO_RS00905 IPR016193 Cytidine deaminase-like THIMO_RS00905 IPR002695 Bifunctional purine biosynthesis protein PurH-like THIMO_RS00905 IPR011607 Methylglyoxal synthase-like domain THIMO_RS00905 IPR036914 Methylglyoxal synthase-like domain superfamily THIMO_RS00910 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase THIMO_RS00910 IPR011004 Trimeric LpxA-like superfamily THIMO_RS00910 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily THIMO_RS00910 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal THIMO_RS00910 IPR001451 Hexapeptide repeat THIMO_RS00915 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily THIMO_RS00915 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain THIMO_RS00915 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS00915 IPR020560 Phosphoribosylglycinamide synthetase, C-domain THIMO_RS00915 IPR011761 ATP-grasp fold THIMO_RS00915 IPR016185 Pre-ATP-grasp domain superfamily THIMO_RS00915 IPR000115 Phosphoribosylglycinamide synthetase THIMO_RS00915 IPR020559 Phosphoribosylglycinamide synthetase, conserved site THIMO_RS00915 IPR011054 Rudiment single hybrid motif THIMO_RS00915 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal THIMO_RS00920 IPR029045 ClpP/crotonase-like domain superfamily THIMO_RS00920 IPR002142 Peptidase S49 THIMO_RS00920 IPR013703 Peptidase S49, N-terminal proteobacteria THIMO_RS00925 IPR004477 ComEC/Rec2-related protein THIMO_RS00925 IPR004797 Competence protein ComEC/Rec2 THIMO_RS00925 IPR001279 Metallo-beta-lactamase THIMO_RS00925 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THIMO_RS00925 IPR035681 ComA-like, MBL domain THIMO_RS00935 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS00935 IPR011924 Lipoprotein releasing system, ATP-binding protein THIMO_RS00935 IPR015854 ABC transporter, lipoprotein release, LolD THIMO_RS00935 IPR017871 ABC transporter, conserved site THIMO_RS00935 IPR003439 ABC transporter-like THIMO_RS00935 IPR003593 AAA+ ATPase domain THIMO_RS00940 IPR003838 ABC transporter permease protein domain THIMO_RS00940 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E THIMO_RS00940 IPR025857 MacB-like periplasmic core domain THIMO_RS00945 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type THIMO_RS00945 IPR017754 Agmatine deiminase THIMO_RS00955 IPR033380 Glutamate-aspartate symport protein GltP/GltT THIMO_RS00955 IPR034703 Proton/glutamate-aspartate symporter GltP THIMO_RS00955 IPR036458 Sodium:dicarboxylate symporter superfamily THIMO_RS00955 IPR001991 Sodium:dicarboxylate symporter THIMO_RS00955 IPR018107 Sodium:dicarboxylate symporter, conserved site THIMO_RS00965 IPR013430 Toxin-antitoxin system, antidote protein, HigA THIMO_RS00965 IPR001387 Cro/C1-type helix-turn-helix domain THIMO_RS00965 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THIMO_RS01000 IPR007686 YutG/PgpA domain THIMO_RS01000 IPR026037 Phosphatidylglycerophosphatase A THIMO_RS01000 IPR036681 PgpA-like superfamily THIMO_RS01005 IPR006283 Thiamine-monophosphate kinase THIMO_RS01005 IPR010918 PurM-like, C-terminal domain THIMO_RS01005 IPR036676 PurM-like, C-terminal domain superfamily THIMO_RS01005 IPR016188 PurM-like, N-terminal domain THIMO_RS01005 IPR036921 PurM-like, N-terminal domain superfamily THIMO_RS01010 IPR006027 NusB/RsmB/TIM44 THIMO_RS01010 IPR035926 NusB-like superfamily THIMO_RS01010 IPR011605 NusB antitermination factor THIMO_RS01015 IPR036467 Lumazine/riboflavin synthase superfamily THIMO_RS01015 IPR002180 Lumazine/riboflavin synthase THIMO_RS01015 IPR034964 Lumazine synthase THIMO_RS01020 IPR032677 GTP cyclohydrolase II THIMO_RS01020 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily THIMO_RS01020 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB THIMO_RS01020 IPR036144 RibA-like superfamily THIMO_RS01025 IPR026017 Lumazine-binding domain THIMO_RS01025 IPR017938 Riboflavin synthase-like beta-barrel THIMO_RS01025 IPR001783 Lumazine-binding protein THIMO_RS01025 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily THIMO_RS01050 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS01050 IPR039420 Transcriptional regulatory protein WalR-like THIMO_RS01050 IPR001867 OmpR/PhoB-type DNA-binding domain THIMO_RS01050 IPR011006 CheY-like superfamily THIMO_RS01050 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS01055 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS01055 IPR005467 Histidine kinase domain THIMO_RS01055 IPR013727 Two-component sensor kinase, N-terminal THIMO_RS01055 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS01055 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS01055 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS01055 IPR003660 HAMP domain THIMO_RS01055 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS01070 IPR016101 CO dehydrogenase, alpha-bundle THIMO_RS01070 IPR010047 Ni-containing CO dehydrogenase THIMO_RS01070 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase THIMO_RS01070 IPR016099 Prismane-like, alpha/beta-sandwich THIMO_RS01070 IPR011254 Prismane-like superfamily THIMO_RS01080 IPR035906 MetI-like superfamily THIMO_RS01080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS01085 IPR003593 AAA+ ATPase domain THIMO_RS01085 IPR003439 ABC transporter-like THIMO_RS01085 IPR017871 ABC transporter, conserved site THIMO_RS01085 IPR005890 Nitrate transport ATP-binding subunit C/D THIMO_RS01085 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS01100 IPR007202 4Fe-4S domain THIMO_RS01100 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB THIMO_RS01100 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS01100 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS01100 IPR011005 Dihydropteroate synthase-like THIMO_RS01105 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA THIMO_RS01105 IPR003667 NqrDE/RnfAE THIMO_RS01110 IPR003667 NqrDE/RnfAE THIMO_RS01110 IPR010968 Ion-translocating oxidoreductase complex subunit E THIMO_RS01115 IPR007329 FMN-binding THIMO_RS01115 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG THIMO_RS01120 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD THIMO_RS01120 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D THIMO_RS01125 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain THIMO_RS01125 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily THIMO_RS01125 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC THIMO_RS01125 IPR009051 Alpha-helical ferredoxin THIMO_RS01125 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS01125 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS01125 IPR019554 Soluble ligand binding domain THIMO_RS01125 IPR026902 RnfC Barrel sandwich hybrid domain THIMO_RS01130 IPR016102 Succinyl-CoA synthetase-like THIMO_RS01130 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site THIMO_RS01130 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site THIMO_RS01130 IPR003781 CoA-binding THIMO_RS01130 IPR005810 Succinyl-CoA ligase, alpha subunit THIMO_RS01130 IPR036291 NAD(P)-binding domain superfamily THIMO_RS01130 IPR005811 ATP-citrate lyase/succinyl-CoA ligase THIMO_RS01135 IPR016102 Succinyl-CoA synthetase-like THIMO_RS01135 IPR005809 Succinate--CoA synthetase, beta subunit THIMO_RS01135 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site THIMO_RS01135 IPR005811 ATP-citrate lyase/succinyl-CoA ligase THIMO_RS01135 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS01135 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type THIMO_RS01140 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 THIMO_RS01140 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 THIMO_RS01140 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal THIMO_RS01140 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain THIMO_RS01140 IPR026255 NAD(P) transhydrogenase, alpha subunit THIMO_RS01140 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal THIMO_RS01140 IPR036291 NAD(P)-binding domain superfamily THIMO_RS01145 IPR029035 DHS-like NAD/FAD-binding domain superfamily THIMO_RS01145 IPR012136 NADP transhydrogenase, beta subunit THIMO_RS01145 IPR034300 NADP transhydrogenase beta-like domain THIMO_RS01150 IPR010945 Malate dehydrogenase, type 2 THIMO_RS01150 IPR001557 L-lactate/malate dehydrogenase THIMO_RS01150 IPR022383 Lactate/malate dehydrogenase, C-terminal THIMO_RS01150 IPR001236 Lactate/malate dehydrogenase, N-terminal THIMO_RS01150 IPR036291 NAD(P)-binding domain superfamily THIMO_RS01150 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal THIMO_RS01160 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type THIMO_RS01160 IPR016102 Succinyl-CoA synthetase-like THIMO_RS01160 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site THIMO_RS01160 IPR005811 ATP-citrate lyase/succinyl-CoA ligase THIMO_RS01160 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS01160 IPR011761 ATP-grasp fold THIMO_RS01160 IPR005809 Succinate--CoA synthetase, beta subunit THIMO_RS01165 IPR036291 NAD(P)-binding domain superfamily THIMO_RS01165 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site THIMO_RS01165 IPR005811 ATP-citrate lyase/succinyl-CoA ligase THIMO_RS01165 IPR003781 CoA-binding THIMO_RS01165 IPR016102 Succinyl-CoA synthetase-like THIMO_RS01165 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site THIMO_RS01165 IPR005810 Succinyl-CoA ligase, alpha subunit THIMO_RS01170 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic THIMO_RS01170 IPR018136 Aconitase family, 4Fe-4S cluster binding site THIMO_RS01170 IPR033941 3-Isopropylmalate dehydratase, catalytic domain THIMO_RS01170 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain THIMO_RS01170 IPR036008 Aconitase, iron-sulfur domain THIMO_RS01170 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 THIMO_RS01170 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit THIMO_RS01175 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric THIMO_RS01185 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily THIMO_RS01185 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain THIMO_RS01185 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS01185 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal THIMO_RS01185 IPR005288 L-aspartate oxidase THIMO_RS01185 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily THIMO_RS01205 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain THIMO_RS01205 IPR029061 Thiamin diphosphate-binding fold THIMO_RS01205 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THIMO_RS01205 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain THIMO_RS01205 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit THIMO_RS01205 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal THIMO_RS01205 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II THIMO_RS01210 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding THIMO_RS01210 IPR029061 Thiamin diphosphate-binding fold THIMO_RS01220 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS01220 IPR014103 Zeta-carotene desaturase THIMO_RS01220 IPR002937 Amine oxidase THIMO_RS01240 IPR017938 Riboflavin synthase-like beta-barrel THIMO_RS01240 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase THIMO_RS01240 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F THIMO_RS01240 IPR001433 Oxidoreductase FAD/NAD(P)-binding THIMO_RS01240 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain THIMO_RS01240 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain THIMO_RS01240 IPR012675 Beta-grasp domain superfamily THIMO_RS01240 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THIMO_RS01240 IPR036010 2Fe-2S ferredoxin-like superfamily THIMO_RS01240 IPR017927 FAD-binding domain, ferredoxin reductase-type THIMO_RS01255 IPR003713 Flagellar protein FliS THIMO_RS01255 IPR036584 Flagellar protein FliS superfamily THIMO_RS01265 IPR001492 Flagellin THIMO_RS01265 IPR001029 Flagellin, D0/D1 domain THIMO_RS01275 IPR003481 Flagellar hook-associated protein 2, N-terminal THIMO_RS01275 IPR010809 Flagellar hook-associated protein 2, C-terminal THIMO_RS01275 IPR040026 Flagellar hook-associated protein 2 THIMO_RS01275 IPR010810 Flagellin hook, IN motif THIMO_RS01280 IPR010518 Flagellar regulatory FleQ THIMO_RS01280 IPR003593 AAA+ ATPase domain THIMO_RS01280 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THIMO_RS01280 IPR025944 Sigma-54 interaction domain, conserved site THIMO_RS01280 IPR009057 Homeobox-like domain superfamily THIMO_RS01280 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS01280 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS01280 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THIMO_RS01280 IPR011006 CheY-like superfamily THIMO_RS01280 IPR002078 RNA polymerase sigma factor 54 interaction domain THIMO_RS01285 IPR003593 AAA+ ATPase domain THIMO_RS01285 IPR011006 CheY-like superfamily THIMO_RS01285 IPR025944 Sigma-54 interaction domain, conserved site THIMO_RS01285 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THIMO_RS01285 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THIMO_RS01285 IPR029995 Transcriptional activator SfnR/FlbD THIMO_RS01285 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS01285 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS01285 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS01285 IPR009057 Homeobox-like domain superfamily THIMO_RS01285 IPR002078 RNA polymerase sigma factor 54 interaction domain THIMO_RS01290 IPR001624 Flagellar hook-basal body complex protein FliE THIMO_RS01295 IPR013556 Flagellar M-ring C-terminal THIMO_RS01295 IPR000067 Flagellar M-ring protein FliF THIMO_RS01295 IPR006182 Secretory protein YscJ/FliF THIMO_RS01300 IPR000090 Flagellar motor switch protein FliG THIMO_RS01300 IPR023087 Flagellar motor switch protein FliG, C-terminal THIMO_RS01300 IPR011002 Flagellar motor switch protein FliG, alpha-helical THIMO_RS01300 IPR028263 Flagellar motor switch protein FliG, N-terminal domain THIMO_RS01300 IPR032779 Flagellar motor switch protein FliG, middle domain THIMO_RS01310 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THIMO_RS01310 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS01310 IPR040627 T3SS EscN ATPase, C-terminal THIMO_RS01310 IPR005714 ATPase, type III secretion system, FliI/YscN THIMO_RS01310 IPR032463 ATPase, type III secretion system, FliI THIMO_RS01310 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site THIMO_RS01310 IPR003593 AAA+ ATPase domain THIMO_RS01310 IPR020005 Flagellar export ATPase FliI, clade 1 THIMO_RS01330 IPR028976 CheC-like superfamily THIMO_RS01330 IPR001543 Surface presentation of antigen (SpoA) THIMO_RS01330 IPR036429 SpoA-like superfamily THIMO_RS01330 IPR001689 Flagellar motor switch protein FliM THIMO_RS01335 IPR001543 Surface presentation of antigen (SpoA) THIMO_RS01335 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb THIMO_RS01335 IPR012826 Flagellar motor switch FliN THIMO_RS01335 IPR036429 SpoA-like superfamily THIMO_RS01345 IPR005837 Flagellar transport protein FliP THIMO_RS01345 IPR005838 Type III secretion system inner membrane P protein THIMO_RS01350 IPR002191 Bacterial export protein family 3 THIMO_RS01350 IPR006305 Flagellar biosynthesis protein FliQ THIMO_RS01355 IPR002010 Type III secretion system inner membrane R protein THIMO_RS01355 IPR006303 Flagellar biosynthesis protein FliR THIMO_RS01360 IPR029025 Type III secretion system substrate exporter, C-terminal THIMO_RS01360 IPR006135 Type III secretion system substrate exporter THIMO_RS01360 IPR006136 Flagellar biosynthetic protein FlhB THIMO_RS01365 IPR001712 Type III secretion system FHIPEP THIMO_RS01365 IPR006301 Flagellar biosynthesis protein FlhA THIMO_RS01365 IPR025505 FHIPEP conserved site THIMO_RS01365 IPR042196 FHIPEP, domain 4 THIMO_RS01365 IPR042193 FHIPEP, domain 3 THIMO_RS01365 IPR042194 FHIPEP, domain 1 THIMO_RS01370 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain THIMO_RS01370 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS01370 IPR020006 Flagellar biosynthesis protein FlhF THIMO_RS01370 IPR003593 AAA+ ATPase domain THIMO_RS01375 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 THIMO_RS01375 IPR025501 ATP binding protein MinD THIMO_RS01375 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS01380 IPR012845 RNA polymerase sigma factor, FliA/WhiG THIMO_RS01380 IPR014284 RNA polymerase sigma-70 like domain THIMO_RS01380 IPR000943 RNA polymerase sigma-70 THIMO_RS01380 IPR007627 RNA polymerase sigma-70 region 2 THIMO_RS01380 IPR007624 RNA polymerase sigma-70 region 3 THIMO_RS01380 IPR007630 RNA polymerase sigma-70 region 4 THIMO_RS01380 IPR013325 RNA polymerase sigma factor, region 2 THIMO_RS01380 IPR013324 RNA polymerase sigma factor, region 3/4-like THIMO_RS01380 IPR028617 RNA polymerase sigma factor FliA THIMO_RS01410 IPR025713 Motility protein B, N-terminal domain THIMO_RS01410 IPR036737 OmpA-like domain superfamily THIMO_RS01410 IPR006665 OmpA-like domain THIMO_RS01415 IPR000540 Flagellar motor protein MotA, conserved site THIMO_RS01415 IPR002898 MotA/TolQ/ExbB proton channel THIMO_RS01425 IPR028624 Transcription elongation factor GreA/GreB THIMO_RS01425 IPR006359 Transcription elongation factor GreA THIMO_RS01425 IPR023459 Transcription elongation factor GreA/GreB family THIMO_RS01425 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily THIMO_RS01425 IPR018151 Transcription elongation factor, GreA/GreB, conserved site THIMO_RS01425 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal THIMO_RS01425 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily THIMO_RS01425 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal THIMO_RS01430 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily THIMO_RS01430 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain THIMO_RS01430 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain THIMO_RS01430 IPR006275 Carbamoyl-phosphate synthase, large subunit THIMO_RS01430 IPR011761 ATP-grasp fold THIMO_RS01430 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain THIMO_RS01430 IPR011607 Methylglyoxal synthase-like domain THIMO_RS01430 IPR036914 Methylglyoxal synthase-like domain superfamily THIMO_RS01430 IPR016185 Pre-ATP-grasp domain superfamily THIMO_RS01430 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain THIMO_RS01435 IPR006274 Carbamoyl-phosphate synthase, small subunit THIMO_RS01435 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily THIMO_RS01435 IPR029062 Class I glutamine amidotransferase-like THIMO_RS01435 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain THIMO_RS01435 IPR017926 Glutamine amidotransferase THIMO_RS01435 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain THIMO_RS01445 IPR003838 ABC transporter permease protein domain THIMO_RS01445 IPR025857 MacB-like periplasmic core domain THIMO_RS01450 IPR003593 AAA+ ATPase domain THIMO_RS01450 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS01450 IPR003439 ABC transporter-like THIMO_RS01450 IPR017911 ABC transporter, macrolide export, ATP-binding domain THIMO_RS01450 IPR025857 MacB-like periplasmic core domain THIMO_RS01450 IPR003838 ABC transporter permease protein domain THIMO_RS01450 IPR017871 ABC transporter, conserved site THIMO_RS01465 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THIMO_RS01465 IPR036291 NAD(P)-binding domain superfamily THIMO_RS01465 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 THIMO_RS01465 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain THIMO_RS01465 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site THIMO_RS01570 IPR021127 CRISPR-associated endonuclease Cas2 THIMO_RS01570 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 THIMO_RS01585 IPR002686 Transposase IS200-like THIMO_RS01585 IPR036515 Transposase IS200-like superfamily THIMO_RS01590 IPR015803 Cysteine-tRNA ligase THIMO_RS01590 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR THIMO_RS01590 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding THIMO_RS01590 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase THIMO_RS01590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS01590 IPR032678 tRNA synthetases class I, catalytic domain THIMO_RS01595 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain THIMO_RS01595 IPR029000 Cyclophilin-like domain superfamily THIMO_RS01595 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase THIMO_RS01595 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site THIMO_RS01600 IPR010138 UDP-2,3-diacylglucosamine hydrolase THIMO_RS01600 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type THIMO_RS01605 IPR003010 Carbon-nitrogen hydrolase THIMO_RS01605 IPR039528 DPM1-like THIMO_RS01605 IPR036526 Carbon-nitrogen hydrolase superfamily THIMO_RS01605 IPR001173 Glycosyltransferase 2-like THIMO_RS01605 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS01605 IPR004563 Apolipoprotein N-acyltransferase THIMO_RS01615 IPR011545 DEAD/DEAH box helicase domain THIMO_RS01615 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS01615 IPR004589 DNA helicase, ATP-dependent, RecQ type THIMO_RS01615 IPR001650 Helicase, C-terminal THIMO_RS01615 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS01615 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site THIMO_RS01640 IPR041692 HHH domain 9 THIMO_RS01640 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS01640 IPR012337 Ribonuclease H-like superfamily THIMO_RS01640 IPR010994 RuvA domain 2-like THIMO_RS01640 IPR022967 RNA-binding domain, S1 THIMO_RS01640 IPR003029 S1 domain THIMO_RS01640 IPR023323 Tex-like domain superfamily THIMO_RS01640 IPR023319 Tex-like protein, HTH domain superfamily THIMO_RS01640 IPR018974 Tex-like protein, N-terminal THIMO_RS01640 IPR037027 YqgF/RNase H-like domain superfamily THIMO_RS01640 IPR032639 Tex protein, YqgF-like domain THIMO_RS01640 IPR006641 YqgF/RNase H-like domain THIMO_RS01655 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site THIMO_RS01655 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS01655 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS01655 IPR039429 Serine hydroxymethyltransferase-like domain THIMO_RS01655 IPR001085 Serine hydroxymethyltransferase THIMO_RS01655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS01660 IPR005144 ATP-cone domain THIMO_RS01660 IPR003796 Ribonucleotide reductase regulator NrdR-like THIMO_RS01665 IPR011549 Riboflavin-specific deaminase, C-terminal THIMO_RS01665 IPR004794 Riboflavin biosynthesis protein RibD THIMO_RS01665 IPR024072 Dihydrofolate reductase-like domain superfamily THIMO_RS01665 IPR002125 Cytidine and deoxycytidylate deaminase domain THIMO_RS01665 IPR016192 APOBEC/CMP deaminase, zinc-binding THIMO_RS01665 IPR016193 Cytidine deaminase-like THIMO_RS01665 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal THIMO_RS01675 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal THIMO_RS01675 IPR001206 Diacylglycerol kinase, catalytic domain THIMO_RS01675 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily THIMO_RS01680 IPR029052 Metallo-dependent phosphatase-like THIMO_RS01680 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA THIMO_RS01680 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type THIMO_RS01705 IPR007197 Radical SAM THIMO_RS01705 IPR010505 Molybdenum cofactor synthesis C-terminal THIMO_RS01705 IPR013483 Molybdenum cofactor biosynthesis protein A THIMO_RS01705 IPR006638 Elp3/MiaB/NifB THIMO_RS01705 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site THIMO_RS01705 IPR013785 Aldolase-type TIM barrel THIMO_RS01710 IPR000719 Protein kinase domain THIMO_RS01710 IPR011009 Protein kinase-like domain superfamily THIMO_RS01710 IPR004147 UbiB domain THIMO_RS01715 IPR002585 Cytochrome ubiquinol oxidase subunit 1 THIMO_RS01720 IPR003317 Cytochrome ubiquinol oxidase subunit 2 THIMO_RS01730 IPR039421 Type I protein exporter THIMO_RS01730 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS01730 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD THIMO_RS01730 IPR003439 ABC transporter-like THIMO_RS01730 IPR036640 ABC transporter type 1, transmembrane domain superfamily THIMO_RS01730 IPR011527 ABC transporter type 1, transmembrane domain THIMO_RS01730 IPR003593 AAA+ ATPase domain THIMO_RS01730 IPR017871 ABC transporter, conserved site THIMO_RS01735 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC THIMO_RS01735 IPR017871 ABC transporter, conserved site THIMO_RS01735 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS01735 IPR011527 ABC transporter type 1, transmembrane domain THIMO_RS01735 IPR003593 AAA+ ATPase domain THIMO_RS01735 IPR003439 ABC transporter-like THIMO_RS01735 IPR036640 ABC transporter type 1, transmembrane domain superfamily THIMO_RS01780 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX THIMO_RS01780 IPR013651 ATP-grasp fold, RimK-type THIMO_RS01780 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK THIMO_RS01780 IPR011761 ATP-grasp fold THIMO_RS01780 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS01780 IPR041107 RimK, PreATP-grasp domain THIMO_RS01790 IPR005467 Histidine kinase domain THIMO_RS01790 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain THIMO_RS01790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS01790 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS01790 IPR007895 MASE1 THIMO_RS01800 IPR014710 RmlC-like jelly roll fold THIMO_RS01800 IPR013096 Cupin 2, conserved barrel THIMO_RS01800 IPR011051 RmlC-like cupin domain superfamily THIMO_RS01805 IPR029016 GAF-like domain superfamily THIMO_RS01805 IPR002078 RNA polymerase sigma factor 54 interaction domain THIMO_RS01805 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS01805 IPR009057 Homeobox-like domain superfamily THIMO_RS01805 IPR025944 Sigma-54 interaction domain, conserved site THIMO_RS01805 IPR003593 AAA+ ATPase domain THIMO_RS01805 IPR003018 GAF domain THIMO_RS01805 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THIMO_RS01805 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THIMO_RS01815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS01815 IPR003333 Mycolic acid cyclopropane synthase THIMO_RS01820 IPR011057 Mss4-like superfamily THIMO_RS01820 IPR002579 Peptide methionine sulphoxide reductase MrsB THIMO_RS01820 IPR028427 Peptide methionine sulfoxide reductase THIMO_RS01830 IPR000399 TPP-binding enzyme, conserved site THIMO_RS01830 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding THIMO_RS01830 IPR012000 Thiamine pyrophosphate enzyme, central domain THIMO_RS01830 IPR029061 Thiamin diphosphate-binding fold THIMO_RS01830 IPR029035 DHS-like NAD/FAD-binding domain superfamily THIMO_RS01830 IPR039368 Acetolactate synthase large subunit, TPP binding domain THIMO_RS01830 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain THIMO_RS01830 IPR012846 Acetolactate synthase, large subunit, biosynthetic THIMO_RS01835 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal THIMO_RS01835 IPR019455 Acetolactate synthase, small subunit, C-terminal THIMO_RS01835 IPR002912 ACT domain THIMO_RS01835 IPR039557 AHAS, ACT domain THIMO_RS01835 IPR004789 Acetolactate synthase, small subunit THIMO_RS01840 IPR013023 Ketol-acid reductoisomerase THIMO_RS01840 IPR000506 Ketol-acid reductoisomerase, C-terminal THIMO_RS01840 IPR013116 Ketol-acid reductoisomerase, N-terminal THIMO_RS01840 IPR014359 Ketol-acid reductoisomerase, prokaryotic THIMO_RS01840 IPR036291 NAD(P)-binding domain superfamily THIMO_RS01840 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THIMO_RS01845 IPR038063 L,D-transpeptidase catalytic domain-like THIMO_RS01845 IPR005490 L,D-transpeptidase catalytic domain THIMO_RS01860 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY THIMO_RS01860 IPR013785 Aldolase-type TIM barrel THIMO_RS01860 IPR000771 Fructose-bisphosphate aldolase, class-II THIMO_RS01860 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY THIMO_RS01865 IPR036412 HAD-like superfamily THIMO_RS01865 IPR006439 HAD hydrolase, subfamily IA THIMO_RS01865 IPR041492 Haloacid dehalogenase-like hydrolase THIMO_RS01865 IPR023214 HAD superfamily THIMO_RS01865 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THIMO_RS01875 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase THIMO_RS01875 IPR036291 NAD(P)-binding domain superfamily THIMO_RS01875 IPR020904 Short-chain dehydrogenase/reductase, conserved site THIMO_RS01875 IPR002347 Short-chain dehydrogenase/reductase SDR THIMO_RS01885 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 THIMO_RS01885 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THIMO_RS01885 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family THIMO_RS01900 IPR013785 Aldolase-type TIM barrel THIMO_RS01900 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal THIMO_RS01910 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS01910 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS01910 IPR005119 LysR, substrate-binding THIMO_RS01910 IPR000847 Transcription regulator HTH, LysR THIMO_RS01915 IPR011660 Antitoxin VapB-like THIMO_RS01920 IPR002716 PIN domain THIMO_RS01920 IPR022907 VapC family THIMO_RS01920 IPR029060 PIN-like domain superfamily THIMO_RS01940 IPR004960 Bacterial lipid A biosynthesis acyltransferase THIMO_RS01940 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase THIMO_RS01945 IPR007452 Translocation and assembly module TamB THIMO_RS01950 IPR000184 Bacterial surface antigen (D15) THIMO_RS01950 IPR010827 POTRA domain, BamA/TamA-like THIMO_RS01950 IPR039910 Surface antigen D15-like THIMO_RS01950 IPR023707 Outer membrane protein assembly factor BamA THIMO_RS01950 IPR034746 POTRA domain THIMO_RS01955 IPR036163 Heavy metal-associated domain superfamily THIMO_RS01955 IPR006121 Heavy metal-associated domain, HMA THIMO_RS01955 IPR006122 Heavy metal-associated domain, copper ion-binding THIMO_RS01955 IPR017969 Heavy-metal-associated, conserved site THIMO_RS01960 IPR003836 Glucokinase THIMO_RS01970 IPR025526 DsrC-like domain superfamily THIMO_RS01970 IPR007453 Sulphur transfer protein DsrC/TusE THIMO_RS01970 IPR042072 DsrC-like protein, C-terminal domain THIMO_RS01975 IPR039104 6-Phosphogluconolactonase THIMO_RS01975 IPR037171 NagB/RpiA transferase-like THIMO_RS01975 IPR005900 6-phosphogluconolactonase, DevB-type THIMO_RS01975 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase THIMO_RS01980 IPR013482 Molybdenum cofactor guanylyltransferase THIMO_RS01980 IPR025877 MobA-like NTP transferase THIMO_RS01980 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS01995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS01995 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THIMO_RS01995 IPR011639 Restriction modification methylase Eco57I THIMO_RS02000 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS02000 IPR000944 Transcription regulator Rrf2-type THIMO_RS02000 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS02000 IPR010242 Transcription factor HTH, IscR THIMO_RS02000 IPR030489 Transcription regulator Rrf2-type, conserved site THIMO_RS02005 IPR007848 Methyltransferase small domain THIMO_RS02005 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THIMO_RS02005 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase THIMO_RS02005 IPR004556 Methyltransferase HemK-like THIMO_RS02005 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS02015 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN THIMO_RS02015 IPR034505 Anaerobic coproporphyrinogen-III oxidase THIMO_RS02015 IPR006638 Elp3/MiaB/NifB THIMO_RS02015 IPR010723 HemN, C-terminal THIMO_RS02015 IPR023404 Radical SAM, alpha/beta horseshoe THIMO_RS02015 IPR007197 Radical SAM THIMO_RS02020 IPR020459 AMP-binding THIMO_RS02020 IPR025110 AMP-binding enzyme, C-terminal domain THIMO_RS02020 IPR042099 AMP-dependent synthetase-like superfamily THIMO_RS02020 IPR020845 AMP-binding, conserved site THIMO_RS02020 IPR000873 AMP-dependent synthetase/ligase THIMO_RS02025 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain THIMO_RS02025 IPR036611 Trigger factor ribosome-binding domain superfamily THIMO_RS02025 IPR008881 Trigger factor, ribosome-binding, bacterial THIMO_RS02025 IPR027304 Trigger factor/SurA domain superfamily THIMO_RS02025 IPR008880 Trigger factor, C-terminal THIMO_RS02025 IPR037041 Trigger factor, C-terminal domain superfamily THIMO_RS02025 IPR005215 Trigger factor THIMO_RS02030 IPR001907 ATP-dependent Clp protease proteolytic subunit THIMO_RS02030 IPR029045 ClpP/crotonase-like domain superfamily THIMO_RS02030 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA THIMO_RS02030 IPR033135 ClpP, histidine active site THIMO_RS02030 IPR018215 ClpP, Ser active site THIMO_RS02035 IPR038366 Zinc finger, ClpX C4-type superfamily THIMO_RS02035 IPR010603 Zinc finger, ClpX C4-type THIMO_RS02035 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS02035 IPR003959 ATPase, AAA-type, core THIMO_RS02035 IPR019489 Clp ATPase, C-terminal THIMO_RS02035 IPR003593 AAA+ ATPase domain THIMO_RS02035 IPR004487 Clp protease, ATP-binding subunit ClpX THIMO_RS02040 IPR027543 Lon protease, bacterial THIMO_RS02040 IPR004815 Lon protease, bacterial/eukaryotic-type THIMO_RS02040 IPR008269 Peptidase S16, Lon proteolytic domain THIMO_RS02040 IPR015947 PUA-like superfamily THIMO_RS02040 IPR003111 Lon, substrate-binding domain THIMO_RS02040 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS02040 IPR003593 AAA+ ATPase domain THIMO_RS02040 IPR008268 Peptidase S16, active site THIMO_RS02040 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS02040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS02040 IPR027065 Lon protease THIMO_RS02040 IPR003959 ATPase, AAA-type, core THIMO_RS02045 IPR000119 Histone-like DNA-binding protein THIMO_RS02045 IPR020816 Histone-like DNA-binding protein, conserved site THIMO_RS02045 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily THIMO_RS02060 IPR027304 Trigger factor/SurA domain superfamily THIMO_RS02060 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type THIMO_RS02060 IPR015391 SurA N-terminal THIMO_RS02060 IPR023034 Peptidyl-prolyl isomerase SurA THIMO_RS02065 IPR036291 NAD(P)-binding domain superfamily THIMO_RS02065 IPR002347 Short-chain dehydrogenase/reductase SDR THIMO_RS02065 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) THIMO_RS02070 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal THIMO_RS02070 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain THIMO_RS02070 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal THIMO_RS02070 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal THIMO_RS02070 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily THIMO_RS02070 IPR006089 Acyl-CoA dehydrogenase, conserved site THIMO_RS02070 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily THIMO_RS02075 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal THIMO_RS02075 IPR029035 DHS-like NAD/FAD-binding domain superfamily THIMO_RS02075 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal THIMO_RS02075 IPR001308 Electron transfer flavoprotein alpha subunit/FixB THIMO_RS02075 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal THIMO_RS02075 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site THIMO_RS02075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS02080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS02080 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal THIMO_RS02080 IPR012255 Electron transfer flavoprotein, beta subunit THIMO_RS02080 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal THIMO_RS02080 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site THIMO_RS02090 IPR010384 MtfA family THIMO_RS02090 IPR042252 MtfA, N-terminal THIMO_RS02090 IPR024079 Metallopeptidase, catalytic domain superfamily THIMO_RS02095 IPR036249 Thioredoxin-like superfamily THIMO_RS02095 IPR003782 Copper chaperone SCO1/SenC THIMO_RS02105 IPR036909 Cytochrome c-like domain superfamily THIMO_RS02105 IPR024167 Cytochrome c4-like THIMO_RS02105 IPR008168 Cytochrome c, class IC THIMO_RS02105 IPR009056 Cytochrome c-like domain THIMO_RS02120 IPR009495 Anti-sigma-F factor NrsF THIMO_RS02125 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS02125 IPR013325 RNA polymerase sigma factor, region 2 THIMO_RS02125 IPR014284 RNA polymerase sigma-70 like domain THIMO_RS02125 IPR039425 RNA polymerase sigma-70 like THIMO_RS02125 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 THIMO_RS02125 IPR013324 RNA polymerase sigma factor, region 3/4-like THIMO_RS02125 IPR007627 RNA polymerase sigma-70 region 2 THIMO_RS02135 IPR002569 Peptide methionine sulphoxide reductase MsrA THIMO_RS02135 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily THIMO_RS02145 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily THIMO_RS02145 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal THIMO_RS02145 IPR013760 DNA topoisomerase, type IIA-like domain superfamily THIMO_RS02145 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta THIMO_RS02145 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative THIMO_RS02145 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal THIMO_RS02145 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat THIMO_RS02150 IPR035917 YjbQ-like superfamily THIMO_RS02150 IPR001602 Uncharacterised protein family UPF0047 THIMO_RS02160 IPR001667 DDH domain THIMO_RS02160 IPR038763 DHH phosphoesterase superfamily THIMO_RS02160 IPR003156 DHHA1 domain THIMO_RS02160 IPR041122 RecJ, OB domain THIMO_RS02160 IPR004610 Bacterial RecJ exonuclease THIMO_RS02170 IPR024937 Domain X THIMO_RS02170 IPR000477 Reverse transcriptase domain THIMO_RS02175 IPR009056 Cytochrome c-like domain THIMO_RS02175 IPR036909 Cytochrome c-like domain superfamily THIMO_RS02185 IPR008538 Domain of unknown function DUF820 THIMO_RS02185 IPR011335 Restriction endonuclease type II-like THIMO_RS02190 IPR023153 PSPTO4464-like domain superfamily THIMO_RS02190 IPR006839 Ribosome-associated, YjgA THIMO_RS02200 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit THIMO_RS02200 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit THIMO_RS02200 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor THIMO_RS02205 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal THIMO_RS02205 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain THIMO_RS02205 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS02205 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site THIMO_RS02205 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily THIMO_RS02205 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily THIMO_RS02205 IPR011281 Succinate dehydrogenase, flavoprotein subunit THIMO_RS02205 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit THIMO_RS02210 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THIMO_RS02210 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein THIMO_RS02210 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS02210 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS02210 IPR012675 Beta-grasp domain superfamily THIMO_RS02210 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal THIMO_RS02210 IPR036010 2Fe-2S ferredoxin-like superfamily THIMO_RS02210 IPR009051 Alpha-helical ferredoxin THIMO_RS02220 IPR000551 MerR-type HTH domain THIMO_RS02220 IPR012925 TipAS antibiotic-recognition domain THIMO_RS02220 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain THIMO_RS02220 IPR009061 Putative DNA-binding domain superfamily THIMO_RS02230 IPR012830 Citrate utilization protein B THIMO_RS02230 IPR036197 NarG-like superfamily THIMO_RS02235 IPR010960 Flavocytochrome c THIMO_RS02235 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS02235 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain THIMO_RS02235 IPR007329 FMN-binding THIMO_RS02235 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily THIMO_RS02240 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 THIMO_RS02240 IPR017929 CobB/CobQ glutamine amidotransferase THIMO_RS02240 IPR004459 Cobyric acid synthase CobQ THIMO_RS02240 IPR011698 CobB/CobQ-like glutamine amidotransferase THIMO_RS02240 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS02240 IPR029062 Class I glutamine amidotransferase-like THIMO_RS02265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS02265 IPR002935 Class I-like SAM-dependent O-methyltransferase THIMO_RS02275 IPR036812 NADP-dependent oxidoreductase domain superfamily THIMO_RS02275 IPR023210 NADP-dependent oxidoreductase domain THIMO_RS02275 IPR020471 Aldo/keto reductase THIMO_RS02275 IPR018170 Aldo/keto reductase, conserved site THIMO_RS02285 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 THIMO_RS02285 IPR017929 CobB/CobQ glutamine amidotransferase THIMO_RS02285 IPR029062 Class I glutamine amidotransferase-like THIMO_RS02285 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS02285 IPR011698 CobB/CobQ-like glutamine amidotransferase THIMO_RS02285 IPR004459 Cobyric acid synthase CobQ THIMO_RS02305 IPR039562 Membrane fusion protein, biotin-lipoyl like domain THIMO_RS02305 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA THIMO_RS02305 IPR006143 RND efflux pump, membrane fusion protein THIMO_RS02310 IPR018146 Glyoxalase I, conserved site THIMO_RS02310 IPR004361 Glyoxalase I THIMO_RS02310 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain THIMO_RS02310 IPR037523 Vicinal oxygen chelate (VOC) domain THIMO_RS02310 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase THIMO_RS02320 IPR003689 Zinc/iron permease THIMO_RS02325 IPR006638 Elp3/MiaB/NifB THIMO_RS02325 IPR006158 Cobalamin (vitamin B12)-binding domain THIMO_RS02325 IPR023404 Radical SAM, alpha/beta horseshoe THIMO_RS02325 IPR034466 Methyltransferase, class B THIMO_RS02325 IPR007197 Radical SAM THIMO_RS02335 IPR003726 Homocysteine-binding domain THIMO_RS02335 IPR036589 Homocysteine-binding domain superfamily THIMO_RS02335 IPR033706 Methionine synthase, B12-binding domain THIMO_RS02335 IPR011822 Cobalamin-dependent methionine synthase THIMO_RS02335 IPR036594 Methionine synthase domain THIMO_RS02335 IPR000489 Pterin-binding domain THIMO_RS02335 IPR004223 Vitamin B12-dependent methionine synthase, activation domain THIMO_RS02335 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily THIMO_RS02335 IPR036724 Cobalamin-binding domain superfamily THIMO_RS02335 IPR006158 Cobalamin (vitamin B12)-binding domain THIMO_RS02335 IPR011005 Dihydropteroate synthase-like THIMO_RS02335 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain THIMO_RS02355 IPR008538 Domain of unknown function DUF820 THIMO_RS02355 IPR011335 Restriction endonuclease type II-like THIMO_RS02360 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS02360 IPR017929 CobB/CobQ glutamine amidotransferase THIMO_RS02360 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA THIMO_RS02360 IPR029062 Class I glutamine amidotransferase-like THIMO_RS02360 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain THIMO_RS02360 IPR011698 CobB/CobQ-like glutamine amidotransferase THIMO_RS02365 IPR004485 Cobalamin biosynthesis CobD/CbiB THIMO_RS02365 IPR031347 Protein AmpE THIMO_RS02370 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase THIMO_RS02370 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS02375 IPR014777 Tetrapyrrole methylase, subdomain 1 THIMO_RS02375 IPR014776 Tetrapyrrole methylase, subdomain 2 THIMO_RS02375 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase THIMO_RS02375 IPR035996 Tetrapyrrole methylase superfamily THIMO_RS02375 IPR000878 Tetrapyrrole methylase THIMO_RS02410 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS02410 IPR011006 CheY-like superfamily THIMO_RS02415 IPR011009 Protein kinase-like domain superfamily THIMO_RS02415 IPR002575 Aminoglycoside phosphotransferase THIMO_RS02425 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily THIMO_RS02425 IPR022941 Signal recognition particle, SRP54 subunit THIMO_RS02425 IPR004780 Signal recognition particle protein THIMO_RS02425 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain THIMO_RS02425 IPR004125 Signal recognition particle, SRP54 subunit, M-domain THIMO_RS02425 IPR013822 Signal recognition particle SRP54, helical bundle THIMO_RS02425 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily THIMO_RS02425 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS02425 IPR003593 AAA+ ATPase domain THIMO_RS02435 IPR013767 PAS fold THIMO_RS02435 IPR035919 EAL domain superfamily THIMO_RS02435 IPR003018 GAF domain THIMO_RS02435 IPR001633 EAL domain THIMO_RS02435 IPR029016 GAF-like domain superfamily THIMO_RS02435 IPR000700 PAS-associated, C-terminal THIMO_RS02435 IPR035965 PAS domain superfamily THIMO_RS02435 IPR000014 PAS domain THIMO_RS02435 IPR001610 PAC motif THIMO_RS02435 IPR029787 Nucleotide cyclase THIMO_RS02435 IPR000160 GGDEF domain THIMO_RS02440 IPR011914 RfaE bifunctional protein, domain II THIMO_RS02440 IPR011913 RfaE bifunctional protein, domain I THIMO_RS02440 IPR011611 Carbohydrate kinase PfkB THIMO_RS02440 IPR004821 Cytidyltransferase-like domain THIMO_RS02440 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site THIMO_RS02440 IPR023030 Bifunctional protein HldE THIMO_RS02440 IPR029056 Ribokinase-like THIMO_RS02440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS02445 IPR004515 Phosphoheptose isomerase THIMO_RS02445 IPR001347 Sugar isomerase (SIS) THIMO_RS02445 IPR035461 GmhA/DiaA THIMO_RS02500 IPR023485 Phosphotyrosine protein phosphatase I THIMO_RS02500 IPR017867 Protein-tyrosine phosphatase, low molecular weight THIMO_RS02500 IPR036196 Phosphotyrosine protein phosphatase I superfamily THIMO_RS02505 IPR021968 Polyribonucleotide phosphorylase C-terminal THIMO_RS02505 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS02505 IPR022967 RNA-binding domain, S1 THIMO_RS02505 IPR004659 Ribonuclease E/G THIMO_RS02505 IPR028878 Ribonuclease E THIMO_RS02505 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G THIMO_RS02505 IPR003029 S1 domain THIMO_RS02510 IPR002942 RNA-binding S4 domain THIMO_RS02510 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site THIMO_RS02510 IPR006225 Pseudouridine synthase, RluC/RluD THIMO_RS02510 IPR020103 Pseudouridine synthase, catalytic domain superfamily THIMO_RS02510 IPR006145 Pseudouridine synthase, RsuA/RluA THIMO_RS02510 IPR036986 RNA-binding S4 domain superfamily THIMO_RS02515 IPR041492 Haloacid dehalogenase-like hydrolase THIMO_RS02515 IPR023214 HAD superfamily THIMO_RS02515 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THIMO_RS02515 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic THIMO_RS02515 IPR037512 Phosphoglycolate phosphatase, prokaryotic THIMO_RS02515 IPR036412 HAD-like superfamily THIMO_RS02515 IPR006439 HAD hydrolase, subfamily IA THIMO_RS02520 IPR002142 Peptidase S49 THIMO_RS02520 IPR029045 ClpP/crotonase-like domain superfamily THIMO_RS02520 IPR004635 Peptidase S49, SppA THIMO_RS02525 IPR008258 Transglycosylase SLT domain 1 THIMO_RS02525 IPR000189 Prokaryotic transglycosylase, active site THIMO_RS02525 IPR018392 LysM domain THIMO_RS02525 IPR036779 LysM domain superfamily THIMO_RS02525 IPR023346 Lysozyme-like domain superfamily THIMO_RS02530 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein THIMO_RS02530 IPR029001 Inosine triphosphate pyrophosphatase-like THIMO_RS02545 IPR001036 Acriflavin resistance protein THIMO_RS02545 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THIMO_RS02550 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS02550 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS02550 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS02550 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS02550 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THIMO_RS02550 IPR011006 CheY-like superfamily THIMO_RS02550 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS02550 IPR005467 Histidine kinase domain THIMO_RS02550 IPR003660 HAMP domain THIMO_RS02550 IPR019247 Histidine kinase BarA, N-terminal THIMO_RS02550 IPR036641 HPT domain superfamily THIMO_RS02550 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS02560 IPR025841 Circularly permuted ATP-grasp type 2 THIMO_RS02560 IPR016450 Uncharacterised conserved protein UCP005522 THIMO_RS02570 IPR020458 Zinc finger, DksA/TraR C4-type conserved site THIMO_RS02570 IPR012784 RNA polymerase-binding transcription factor DksA THIMO_RS02570 IPR037187 DksA, N-terminal domain superfamily THIMO_RS02570 IPR000962 Zinc finger, DksA/TraR C4-type THIMO_RS02575 IPR007453 Sulphur transfer protein DsrC/TusE THIMO_RS02575 IPR025526 DsrC-like domain superfamily THIMO_RS02575 IPR042072 DsrC-like protein, C-terminal domain THIMO_RS02610 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal THIMO_RS02610 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain THIMO_RS02610 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site THIMO_RS02610 IPR005722 ATP synthase, F1 complex, beta subunit THIMO_RS02610 IPR017691 ATP synthase subunit beta, bacterial and archaeal THIMO_RS02610 IPR003593 AAA+ ATPase domain THIMO_RS02610 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily THIMO_RS02610 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THIMO_RS02610 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS02630 IPR009042 RNA polymerase sigma-70 region 1.2 THIMO_RS02630 IPR042189 Sigma-70 factor, region 1.1 superfamily THIMO_RS02630 IPR000943 RNA polymerase sigma-70 THIMO_RS02630 IPR007627 RNA polymerase sigma-70 region 2 THIMO_RS02630 IPR013325 RNA polymerase sigma factor, region 2 THIMO_RS02630 IPR007631 RNA polymerase sigma factor 70, non-essential domain THIMO_RS02630 IPR013324 RNA polymerase sigma factor, region 3/4-like THIMO_RS02630 IPR014284 RNA polymerase sigma-70 like domain THIMO_RS02630 IPR007630 RNA polymerase sigma-70 region 4 THIMO_RS02630 IPR028630 RNA polymerase sigma factor RpoD THIMO_RS02630 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS02630 IPR012760 RNA polymerase sigma factor RpoD, C-terminal THIMO_RS02630 IPR007127 RNA polymerase sigma factor 70, region 1.1 THIMO_RS02630 IPR007624 RNA polymerase sigma-70 region 3 THIMO_RS02635 IPR034151 Bacterial DnaG primase, TOPRIM domain THIMO_RS02635 IPR036977 DNA Primase, CHC2-type zinc finger THIMO_RS02635 IPR030846 DNA primase DnaG, bacteria THIMO_RS02635 IPR002694 Zinc finger, CHC2-type THIMO_RS02635 IPR013173 DNA primase DnaG, DnaB-binding domain THIMO_RS02635 IPR006295 DNA primase, DnaG THIMO_RS02635 IPR019475 DNA primase, DnaB-helicase binding domain THIMO_RS02635 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily THIMO_RS02635 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal THIMO_RS02635 IPR006171 TOPRIM domain THIMO_RS02635 IPR013264 DNA primase, catalytic core, N-terminal THIMO_RS02645 IPR018278 Ribosomal protein S21, conserved site THIMO_RS02645 IPR001911 Ribosomal protein S21 THIMO_RS02645 IPR038380 Ribosomal protein S21 superfamily THIMO_RS02655 IPR017861 Kae1/TsaD family THIMO_RS02655 IPR000905 Gcp-like domain THIMO_RS02655 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD THIMO_RS02655 IPR017860 Peptidase M22, conserved site THIMO_RS02660 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY THIMO_RS02665 IPR006156 Dihydroneopterin aldolase THIMO_RS02665 IPR006157 Dihydroneopterin aldolase/epimerase domain THIMO_RS02670 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK THIMO_RS02670 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily THIMO_RS02680 IPR020904 Short-chain dehydrogenase/reductase, conserved site THIMO_RS02680 IPR002347 Short-chain dehydrogenase/reductase SDR THIMO_RS02680 IPR036291 NAD(P)-binding domain superfamily THIMO_RS02680 IPR017711 Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase THIMO_RS02705 IPR002781 Transmembrane protein TauE-like THIMO_RS02710 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS02710 IPR023753 FAD/NAD(P)-binding domain THIMO_RS02715 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family THIMO_RS02715 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase THIMO_RS02715 IPR006683 Thioesterase domain THIMO_RS02715 IPR029069 HotDog domain superfamily THIMO_RS02715 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site THIMO_RS02720 IPR002898 MotA/TolQ/ExbB proton channel THIMO_RS02720 IPR014163 Tol-Pal system, TolQ THIMO_RS02725 IPR003400 Biopolymer transport protein ExbD/TolR THIMO_RS02725 IPR014168 Tol-Pal system protein TolR THIMO_RS02735 IPR014167 Tol-Pal system protein TolB THIMO_RS02735 IPR011659 WD40-like Beta Propeller THIMO_RS02735 IPR011042 Six-bladed beta-propeller, TolB-like THIMO_RS02735 IPR036752 TolB, N-terminal domain superfamily THIMO_RS02735 IPR007195 TolB, N-terminal THIMO_RS02740 IPR006665 OmpA-like domain THIMO_RS02740 IPR006664 Outer membrane protein, bacterial THIMO_RS02740 IPR036737 OmpA-like domain superfamily THIMO_RS02740 IPR039001 Peptidoglycan-associated lipoprotein THIMO_RS02740 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal THIMO_RS02740 IPR006690 Outer membrane protein, OmpA-like, conserved site THIMO_RS02750 IPR013785 Aldolase-type TIM barrel THIMO_RS02750 IPR007197 Radical SAM THIMO_RS02750 IPR024924 7-carboxy-7-deazaguanine synthase-like THIMO_RS02770 IPR023620 Small protein B THIMO_RS02770 IPR020081 SsrA-binding protein, conserved site THIMO_RS02770 IPR000037 SsrA-binding protein THIMO_RS02775 IPR035990 Triosephosphate isomerase superfamily THIMO_RS02775 IPR013785 Aldolase-type TIM barrel THIMO_RS02775 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic THIMO_RS02775 IPR000652 Triosephosphate isomerase THIMO_RS02775 IPR020861 Triosephosphate isomerase, active site THIMO_RS02780 IPR004692 Preprotein translocase SecG subunit THIMO_RS02790 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid THIMO_RS02790 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily THIMO_RS02790 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 THIMO_RS02795 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit THIMO_RS02795 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit THIMO_RS02800 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit THIMO_RS02800 IPR010218 NADH dehydrogenase, subunit C THIMO_RS02800 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily THIMO_RS02800 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site THIMO_RS02805 IPR029014 [NiFe]-hydrogenase, large subunit THIMO_RS02805 IPR001135 NADH-quinone oxidoreductase, subunit D THIMO_RS02805 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site THIMO_RS02805 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H THIMO_RS02805 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily THIMO_RS02810 IPR042128 NuoE domain THIMO_RS02810 IPR002023 NADH-quinone oxidoreductase subunit E-like THIMO_RS02810 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal THIMO_RS02810 IPR036249 Thioredoxin-like superfamily THIMO_RS02815 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily THIMO_RS02815 IPR019554 Soluble ligand binding domain THIMO_RS02815 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily THIMO_RS02815 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain THIMO_RS02815 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site THIMO_RS02815 IPR011537 NADH ubiquinone oxidoreductase, F subunit THIMO_RS02815 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain THIMO_RS02820 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain THIMO_RS02820 IPR010228 NADH:ubiquinone oxidoreductase, subunit G THIMO_RS02820 IPR036010 2Fe-2S ferredoxin-like superfamily THIMO_RS02820 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THIMO_RS02820 IPR006656 Molybdopterin oxidoreductase THIMO_RS02820 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain THIMO_RS02820 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site THIMO_RS02820 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site THIMO_RS02820 IPR010228 NADH:ubiquinone oxidoreductase, subunit G THIMO_RS02820 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding THIMO_RS02820 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal THIMO_RS02820 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal THIMO_RS02820 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THIMO_RS02820 IPR036010 2Fe-2S ferredoxin-like superfamily THIMO_RS02820 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding THIMO_RS02820 IPR006656 Molybdopterin oxidoreductase THIMO_RS02825 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H THIMO_RS02825 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site THIMO_RS02830 IPR010226 NADH-quinone oxidoreductase, chain I THIMO_RS02830 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS02830 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS02835 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 THIMO_RS02835 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ THIMO_RS02840 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like THIMO_RS02840 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K THIMO_RS02845 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal THIMO_RS02845 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup THIMO_RS02845 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 THIMO_RS02845 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THIMO_RS02850 IPR010227 NADH-quinone oxidoreductase, chain M/4 THIMO_RS02850 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal THIMO_RS02850 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THIMO_RS02850 IPR003918 NADH:ubiquinone oxidoreductase THIMO_RS02855 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 THIMO_RS02855 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THIMO_RS02880 IPR030870 Cell division protein ZapE THIMO_RS02880 IPR005654 ATPase, AFG1-like THIMO_RS02880 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS02885 IPR018060 DNA binding HTH domain, AraC-type THIMO_RS02885 IPR009057 Homeobox-like domain superfamily THIMO_RS02885 IPR020449 Transcription regulator HTH, AraC- type THIMO_RS02885 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal THIMO_RS02920 IPR011009 Protein kinase-like domain superfamily THIMO_RS02920 IPR000719 Protein kinase domain THIMO_RS02920 IPR008271 Serine/threonine-protein kinase, active site THIMO_RS02930 IPR020579 Exonuclease VII, large subunit, C-terminal THIMO_RS02930 IPR025824 OB-fold nucleic acid binding domain THIMO_RS02930 IPR003753 Exonuclease VII, large subunit THIMO_RS02935 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS02935 IPR016462 Molybdate-dependent transcriptional regulator ModE THIMO_RS02935 IPR003725 Molybdenum-binding protein ModE, N-terminal THIMO_RS02935 IPR004606 Molybdenum-pterin binding THIMO_RS02935 IPR005116 Transport-associated OB, type 1 THIMO_RS02935 IPR000847 Transcription regulator HTH, LysR THIMO_RS02935 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS02935 IPR008995 Molybdate/tungstate binding, C-terminal THIMO_RS02940 IPR005950 Molybdate ABC transporter, substrate-binding protein THIMO_RS02945 IPR011867 Molybdate ABC transporter, permease protein THIMO_RS02945 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS02945 IPR035906 MetI-like superfamily THIMO_RS02950 IPR015852 ABC transporter, molybdenum import, ModC THIMO_RS02950 IPR004606 Molybdenum-pterin binding THIMO_RS02950 IPR011868 Molybdate ABC transporter, ATP-binding protein THIMO_RS02950 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS02950 IPR003439 ABC transporter-like THIMO_RS02950 IPR003593 AAA+ ATPase domain THIMO_RS02950 IPR005116 Transport-associated OB, type 1 THIMO_RS02950 IPR017871 ABC transporter, conserved site THIMO_RS02950 IPR008995 Molybdate/tungstate binding, C-terminal THIMO_RS02955 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal THIMO_RS02955 IPR013785 Aldolase-type TIM barrel THIMO_RS02955 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal THIMO_RS02955 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD THIMO_RS02955 IPR006242 Putative pyrophosphorylase ModD THIMO_RS02955 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily THIMO_RS02955 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal THIMO_RS02960 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain THIMO_RS02960 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site THIMO_RS02960 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase THIMO_RS02960 IPR036291 NAD(P)-binding domain superfamily THIMO_RS02960 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THIMO_RS02985 IPR035919 EAL domain superfamily THIMO_RS02985 IPR003018 GAF domain THIMO_RS02985 IPR029016 GAF-like domain superfamily THIMO_RS02985 IPR000160 GGDEF domain THIMO_RS02985 IPR029787 Nucleotide cyclase THIMO_RS02985 IPR016132 Phytochrome chromophore attachment domain THIMO_RS02985 IPR001633 EAL domain THIMO_RS02985 IPR001294 Phytochrome THIMO_RS02985 IPR013515 Phytochrome, central region THIMO_RS02990 IPR011006 CheY-like superfamily THIMO_RS02990 IPR003660 HAMP domain THIMO_RS02990 IPR036641 HPT domain superfamily THIMO_RS02990 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS02990 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THIMO_RS02990 IPR019247 Histidine kinase BarA, N-terminal THIMO_RS02990 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS02990 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS02990 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS02990 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS02990 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS02990 IPR005467 Histidine kinase domain THIMO_RS02995 IPR000160 GGDEF domain THIMO_RS02995 IPR013656 PAS fold-4 THIMO_RS02995 IPR000700 PAS-associated, C-terminal THIMO_RS02995 IPR000014 PAS domain THIMO_RS02995 IPR029787 Nucleotide cyclase THIMO_RS02995 IPR035965 PAS domain superfamily THIMO_RS03025 IPR004681 TRAP transporter large membrane protein DctM THIMO_RS03025 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit THIMO_RS03045 IPR025857 MacB-like periplasmic core domain THIMO_RS03045 IPR003838 ABC transporter permease protein domain THIMO_RS03050 IPR017871 ABC transporter, conserved site THIMO_RS03050 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03050 IPR025857 MacB-like periplasmic core domain THIMO_RS03050 IPR017911 ABC transporter, macrolide export, ATP-binding domain THIMO_RS03050 IPR003838 ABC transporter permease protein domain THIMO_RS03050 IPR003593 AAA+ ATPase domain THIMO_RS03050 IPR003439 ABC transporter-like THIMO_RS03055 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THIMO_RS03055 IPR022824 Multidrug resistance protein MdtA THIMO_RS03055 IPR006143 RND efflux pump, membrane fusion protein THIMO_RS03110 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03110 IPR006321 Pilus retraction protein PilT THIMO_RS03110 IPR003593 AAA+ ATPase domain THIMO_RS03110 IPR001482 Type II/IV secretion system protein THIMO_RS03115 IPR003593 AAA+ ATPase domain THIMO_RS03115 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03115 IPR001482 Type II/IV secretion system protein THIMO_RS03115 IPR037257 General secretory system II, protein E, N-terminal superfamily THIMO_RS03115 IPR013369 Type II secretion system GspE THIMO_RS03115 IPR042181 Type II secretion system, protein E, N-terminal THIMO_RS03120 IPR042094 Type II secretion system F domain superfamily THIMO_RS03120 IPR003004 GspF/PilC family THIMO_RS03120 IPR018076 Type II secretion system F domain THIMO_RS03120 IPR001992 Type II secretion system conserved site THIMO_RS03130 IPR004845 Type II secretion system GspD, conserved site THIMO_RS03130 IPR013356 Type II secretion system GspD THIMO_RS03130 IPR004846 Type II/III secretion system THIMO_RS03130 IPR038591 NolW-like superfamily THIMO_RS03130 IPR005644 NolW-like THIMO_RS03130 IPR001775 GspD/PilQ family THIMO_RS03135 IPR008258 Transglycosylase SLT domain 1 THIMO_RS03135 IPR000189 Prokaryotic transglycosylase, active site THIMO_RS03135 IPR023346 Lysozyme-like domain superfamily THIMO_RS03150 IPR004923 Iron permease FTR1/Fip1/EfeU THIMO_RS03155 IPR025403 Domain of unknown function DUF4129 THIMO_RS03155 IPR038765 Papain-like cysteine peptidase superfamily THIMO_RS03155 IPR002931 Transglutaminase-like THIMO_RS03155 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal THIMO_RS03165 IPR011703 ATPase, AAA-3 THIMO_RS03165 IPR041628 ChlI/MoxR, AAA lid domain THIMO_RS03165 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03185 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS03185 IPR003660 HAMP domain THIMO_RS03185 IPR011006 CheY-like superfamily THIMO_RS03185 IPR005467 Histidine kinase domain THIMO_RS03185 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS03185 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS03185 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THIMO_RS03185 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS03185 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS03185 IPR036641 HPT domain superfamily THIMO_RS03185 IPR019247 Histidine kinase BarA, N-terminal THIMO_RS03185 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS03190 IPR006082 Phosphoribulokinase THIMO_RS03190 IPR006083 Phosphoribulokinase/uridine kinase THIMO_RS03190 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03195 IPR016169 FAD-binding, type PCMH, subdomain 2 THIMO_RS03195 IPR005170 Transporter-associated domain THIMO_RS03195 IPR036318 FAD-binding, type PCMH-like superfamily THIMO_RS03195 IPR000644 CBS domain THIMO_RS03200 IPR020549 Endoribonuclease YbeY, conserved site THIMO_RS03200 IPR002036 Endoribonuclease YbeY THIMO_RS03200 IPR023091 Metalloprotease catalytic domain superfamily, predicted THIMO_RS03205 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03205 IPR003714 PhoH-like protein THIMO_RS03210 IPR038135 Methylthiotransferase, N-terminal domain superfamily THIMO_RS03210 IPR007197 Radical SAM THIMO_RS03210 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB THIMO_RS03210 IPR013848 Methylthiotransferase, N-terminal THIMO_RS03210 IPR020612 Methylthiotransferase, conserved site THIMO_RS03210 IPR002792 TRAM domain THIMO_RS03210 IPR005839 Methylthiotransferase THIMO_RS03210 IPR023404 Radical SAM, alpha/beta horseshoe THIMO_RS03210 IPR006638 Elp3/MiaB/NifB THIMO_RS03220 IPR029062 Class I glutamine amidotransferase-like THIMO_RS03220 IPR017926 Glutamine amidotransferase THIMO_RS03225 IPR011557 DNA gyrase, subunit B THIMO_RS03225 IPR041423 DNA gyrase subunit B insert domain THIMO_RS03225 IPR002288 DNA gyrase B subunit, C-terminal THIMO_RS03225 IPR013760 DNA topoisomerase, type IIA-like domain superfamily THIMO_RS03225 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS03225 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS03225 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS03225 IPR001241 DNA topoisomerase, type IIA THIMO_RS03225 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal THIMO_RS03225 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 THIMO_RS03225 IPR006171 TOPRIM domain THIMO_RS03225 IPR034160 DNA gyrase subunit B, TOPRIM domain THIMO_RS03225 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS03225 IPR018522 DNA topoisomerase, type IIA, conserved site THIMO_RS03230 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03230 IPR033186 Helicase HerA-like C-terminal THIMO_RS03240 IPR001650 Helicase, C-terminal THIMO_RS03240 IPR011545 DEAD/DEAH box helicase domain THIMO_RS03240 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03240 IPR018973 DEAD/DEAH-box helicase, putative THIMO_RS03240 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS03255 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain THIMO_RS03255 IPR011603 2-oxoglutarate dehydrogenase E1 component THIMO_RS03255 IPR001017 Dehydrogenase, E1 component THIMO_RS03255 IPR029061 Thiamin diphosphate-binding fold THIMO_RS03255 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal THIMO_RS03255 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily THIMO_RS03255 IPR005475 Transketolase-like, pyrimidine-binding domain THIMO_RS03260 IPR006255 Dihydrolipoamide succinyltransferase THIMO_RS03260 IPR011053 Single hybrid motif THIMO_RS03260 IPR004167 Peripheral subunit-binding domain THIMO_RS03260 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily THIMO_RS03260 IPR036625 E3-binding domain superfamily THIMO_RS03260 IPR000089 Biotin/lipoyl attachment THIMO_RS03260 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain THIMO_RS03260 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site THIMO_RS03275 IPR030673 Pyrophosphatase, GppA/Ppx-type THIMO_RS03275 IPR022371 Exopolyphosphatase THIMO_RS03275 IPR003695 Ppx/GppA phosphatase THIMO_RS03295 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03295 IPR006321 Pilus retraction protein PilT THIMO_RS03295 IPR001482 Type II/IV secretion system protein THIMO_RS03300 IPR003593 AAA+ ATPase domain THIMO_RS03300 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03300 IPR006321 Pilus retraction protein PilT THIMO_RS03300 IPR001482 Type II/IV secretion system protein THIMO_RS03305 IPR033747 Class I PurE THIMO_RS03305 IPR024694 PurE, prokaryotic type THIMO_RS03305 IPR035893 PurE domain superfamily THIMO_RS03305 IPR000031 PurE domain THIMO_RS03310 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type THIMO_RS03310 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS03310 IPR016185 Pre-ATP-grasp domain superfamily THIMO_RS03310 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit THIMO_RS03310 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain THIMO_RS03310 IPR011054 Rudiment single hybrid motif THIMO_RS03310 IPR011761 ATP-grasp fold THIMO_RS03330 IPR018303 P-type ATPase, phosphorylation site THIMO_RS03330 IPR001757 P-type ATPase THIMO_RS03330 IPR023214 HAD superfamily THIMO_RS03330 IPR006068 Cation-transporting P-type ATPase, C-terminal THIMO_RS03330 IPR004014 Cation-transporting P-type ATPase, N-terminal THIMO_RS03330 IPR036412 HAD-like superfamily THIMO_RS03330 IPR008250 P-type ATPase, A domain superfamily THIMO_RS03330 IPR023299 P-type ATPase, cytoplasmic domain N THIMO_RS03330 IPR023298 P-type ATPase, transmembrane domain superfamily THIMO_RS03335 IPR007296 Domain of unknown function DUF403 THIMO_RS03335 IPR025841 Circularly permuted ATP-grasp type 2 THIMO_RS03340 IPR025841 Circularly permuted ATP-grasp type 2 THIMO_RS03340 IPR016450 Uncharacterised conserved protein UCP005522 THIMO_RS03350 IPR035240 SprT-like, zinc ribbon domain THIMO_RS03350 IPR006640 SprT-like THIMO_RS03350 IPR023483 Uncharacterised protein family SprT THIMO_RS03355 IPR028989 Ribosome maturation factor RimP, N-terminal THIMO_RS03355 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily THIMO_RS03355 IPR003728 Ribosome maturation factor RimP THIMO_RS03355 IPR028998 Ribosome maturation factor RimP, C-terminal THIMO_RS03355 IPR035956 RimP, N-terminal domain superfamily THIMO_RS03360 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS03360 IPR030842 Transcription termination/antitermination protein NusA, bacterial THIMO_RS03360 IPR003029 S1 domain THIMO_RS03360 IPR036555 NusA, N-terminal domain superfamily THIMO_RS03360 IPR022967 RNA-binding domain, S1 THIMO_RS03360 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical THIMO_RS03360 IPR010213 Transcription termination factor NusA THIMO_RS03360 IPR010214 Transcription termination factor NusA, C-terminal duplication THIMO_RS03360 IPR013735 Transcription factor NusA, N-terminal THIMO_RS03360 IPR015946 K homology domain-like, alpha/beta THIMO_RS03360 IPR025249 KH domain, NusA-like THIMO_RS03360 IPR009019 K homology domain superfamily, prokaryotic type THIMO_RS03365 IPR015760 Translation initiation factor IF- 2 THIMO_RS03365 IPR023115 Translation initiation factor IF- 2, domain 3 THIMO_RS03365 IPR036925 Translation initiation factor IF-2, domain 3 superfamily THIMO_RS03365 IPR009000 Translation protein, beta-barrel domain superfamily THIMO_RS03365 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03365 IPR009061 Putative DNA-binding domain superfamily THIMO_RS03365 IPR005225 Small GTP-binding protein domain THIMO_RS03365 IPR004161 Translation elongation factor EFTu-like, domain 2 THIMO_RS03365 IPR000178 Translation initiation factor aIF-2, bacterial-like THIMO_RS03365 IPR013575 Initiation factor 2 associated domain, bacterial THIMO_RS03365 IPR006847 Translation initiation factor IF-2, N-terminal THIMO_RS03365 IPR000795 Transcription factor, GTP-binding domain THIMO_RS03370 IPR015946 K homology domain-like, alpha/beta THIMO_RS03370 IPR023799 Ribosome-binding factor A domain superfamily THIMO_RS03370 IPR000238 Ribosome-binding factor A THIMO_RS03370 IPR020053 Ribosome-binding factor A, conserved site THIMO_RS03375 IPR032819 tRNA pseudouridylate synthase B, C-terminal THIMO_RS03375 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal THIMO_RS03375 IPR014780 tRNA pseudouridine synthase II, TruB THIMO_RS03375 IPR015947 PUA-like superfamily THIMO_RS03375 IPR002501 Pseudouridine synthase II, N-terminal THIMO_RS03375 IPR020103 Pseudouridine synthase, catalytic domain superfamily THIMO_RS03375 IPR036974 PUA domain superfamily THIMO_RS03380 IPR009068 S15/NS1, RNA-binding THIMO_RS03380 IPR005290 Ribosomal protein S15, bacterial-type THIMO_RS03380 IPR000589 Ribosomal protein S15 THIMO_RS03385 IPR001247 Exoribonuclease, phosphorolytic domain 1 THIMO_RS03385 IPR004087 K Homology domain THIMO_RS03385 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS03385 IPR022967 RNA-binding domain, S1 THIMO_RS03385 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain THIMO_RS03385 IPR004088 K Homology domain, type 1 THIMO_RS03385 IPR036612 K Homology domain, type 1 superfamily THIMO_RS03385 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS03385 IPR012162 Polyribonucleotide nucleotidyltransferase THIMO_RS03385 IPR027408 PNPase/RNase PH domain superfamily THIMO_RS03385 IPR036345 Exoribonuclease, PH domain 2 superfamily THIMO_RS03385 IPR015847 Exoribonuclease, phosphorolytic domain 2 THIMO_RS03385 IPR003029 S1 domain THIMO_RS03390 IPR011066 Mechanosensitive ion channel MscS, C-terminal THIMO_RS03390 IPR006686 Mechanosensitive ion channel MscS, conserved site THIMO_RS03390 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 THIMO_RS03390 IPR023408 Mechanosensitive ion channel MscS domain superfamily THIMO_RS03390 IPR024393 Mechanosensitive ion channel MscS, porin domain THIMO_RS03390 IPR006685 Mechanosensitive ion channel MscS THIMO_RS03390 IPR025692 Mechanosensitive ion channel inner membrane domain 1 THIMO_RS03390 IPR023298 P-type ATPase, transmembrane domain superfamily THIMO_RS03390 IPR010920 LSM domain superfamily THIMO_RS03395 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain THIMO_RS03395 IPR011991 ArsR-like helix-turn-helix domain THIMO_RS03395 IPR000485 AsnC-type HTH domain THIMO_RS03395 IPR019888 Transcription regulator AsnC-type THIMO_RS03395 IPR011008 Dimeric alpha-beta barrel THIMO_RS03395 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS03395 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS03400 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site THIMO_RS03400 IPR000891 Pyruvate carboxyltransferase THIMO_RS03400 IPR039371 LeuA, N-terminal catalytic TIM barrel domain THIMO_RS03400 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily THIMO_RS03400 IPR005668 2-isopropylmalate synthase THIMO_RS03400 IPR013785 Aldolase-type TIM barrel THIMO_RS03400 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain THIMO_RS03405 IPR011332 Zinc-binding ribosomal protein THIMO_RS03405 IPR018264 Ribosomal protein L33, conserved site THIMO_RS03405 IPR001705 Ribosomal protein L33 THIMO_RS03405 IPR038584 Ribosomal protein L33 superfamily THIMO_RS03410 IPR034704 L28p-like THIMO_RS03410 IPR037147 Ribosomal protein L28/L24 superfamily THIMO_RS03410 IPR001383 Ribosomal protein L28 THIMO_RS03410 IPR026569 Ribosomal protein L28/L24 THIMO_RS03415 IPR004114 THUMP domain THIMO_RS03415 IPR017244 Ribosomal RNA large subunit methyltransferase K/L THIMO_RS03415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS03415 IPR019614 S-adenosylmethionine-dependent methyltransferase THIMO_RS03415 IPR000241 Putative RNA methylase domain THIMO_RS03415 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THIMO_RS03420 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site THIMO_RS03420 IPR001765 Carbonic anhydrase THIMO_RS03420 IPR036874 Carbonic anhydrase superfamily THIMO_RS03435 IPR002912 ACT domain THIMO_RS03435 IPR003607 HD/PDEase domain THIMO_RS03435 IPR006674 HD domain THIMO_RS03435 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase THIMO_RS03435 IPR002934 Polymerase, nucleotidyl transferase domain THIMO_RS03435 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme THIMO_RS03440 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 THIMO_RS03440 IPR001714 Peptidase M24, methionine aminopeptidase THIMO_RS03440 IPR036005 Creatinase/aminopeptidase-like THIMO_RS03440 IPR000994 Peptidase M24 THIMO_RS03445 IPR001865 Ribosomal protein S2 THIMO_RS03445 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily THIMO_RS03445 IPR018130 Ribosomal protein S2, conserved site THIMO_RS03445 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid THIMO_RS03450 IPR036402 Elongation factor Ts, dimerisation domain superfamily THIMO_RS03450 IPR001816 Translation elongation factor EFTs/EF1B THIMO_RS03450 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation THIMO_RS03450 IPR018101 Translation elongation factor Ts, conserved site THIMO_RS03450 IPR009060 UBA-like superfamily THIMO_RS03455 IPR036393 Acetylglutamate kinase-like superfamily THIMO_RS03455 IPR011817 Uridylate kinase THIMO_RS03455 IPR015963 Uridylate kinase, bacteria THIMO_RS03455 IPR001048 Aspartate/glutamate/uridylate kinase THIMO_RS03460 IPR023584 Ribosome recycling factor domain THIMO_RS03460 IPR002661 Ribosome recycling factor THIMO_RS03460 IPR036191 RRF superfamily THIMO_RS03465 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site THIMO_RS03465 IPR001441 Decaprenyl diphosphate synthase-like THIMO_RS03465 IPR036424 Decaprenyl diphosphate synthase-like superfamily THIMO_RS03470 IPR000374 Phosphatidate cytidylyltransferase THIMO_RS03475 IPR026877 DXP reductoisomerase C-terminal domain THIMO_RS03475 IPR036169 DXP reductoisomerase, C-terminal domain superfamily THIMO_RS03475 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase THIMO_RS03475 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal THIMO_RS03475 IPR036291 NAD(P)-binding domain superfamily THIMO_RS03475 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal THIMO_RS03480 IPR008915 Peptidase M50 THIMO_RS03480 IPR001478 PDZ domain THIMO_RS03480 IPR041489 PDZ domain 6 THIMO_RS03480 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase THIMO_RS03480 IPR036034 PDZ superfamily THIMO_RS03485 IPR039910 Surface antigen D15-like THIMO_RS03485 IPR034746 POTRA domain THIMO_RS03485 IPR023707 Outer membrane protein assembly factor BamA THIMO_RS03485 IPR010827 POTRA domain, BamA/TamA-like THIMO_RS03485 IPR000184 Bacterial surface antigen (D15) THIMO_RS03495 IPR011004 Trimeric LpxA-like superfamily THIMO_RS03495 IPR001451 Hexapeptide repeat THIMO_RS03495 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD THIMO_RS03495 IPR018357 Hexapeptide transferase, conserved site THIMO_RS03495 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region THIMO_RS03500 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ THIMO_RS03500 IPR029069 HotDog domain superfamily THIMO_RS03500 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ THIMO_RS03505 IPR018357 Hexapeptide transferase, conserved site THIMO_RS03505 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily THIMO_RS03505 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase THIMO_RS03505 IPR011004 Trimeric LpxA-like superfamily THIMO_RS03505 IPR001451 Hexapeptide repeat THIMO_RS03505 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal THIMO_RS03510 IPR003835 Glycosyl transferase, family 19 THIMO_RS03515 IPR022898 Ribonuclease HII THIMO_RS03515 IPR001352 Ribonuclease HII/HIII THIMO_RS03515 IPR024567 Ribonuclease HII/HIII domain THIMO_RS03515 IPR012337 Ribonuclease H-like superfamily THIMO_RS03515 IPR036397 Ribonuclease H superfamily THIMO_RS03520 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial THIMO_RS03520 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type THIMO_RS03520 IPR011005 Dihydropteroate synthase-like THIMO_RS03530 IPR001602 Uncharacterised protein family UPF0047 THIMO_RS03530 IPR035917 YjbQ-like superfamily THIMO_RS03535 IPR011551 NTP pyrophosphohydrolase MazG THIMO_RS03535 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core THIMO_RS03540 IPR037518 MPN domain THIMO_RS03540 IPR020891 Uncharacterised protein family UPF0758, conserved site THIMO_RS03540 IPR001405 Uncharacterised protein family UPF0758 THIMO_RS03540 IPR010994 RuvA domain 2-like THIMO_RS03540 IPR025657 RadC-like JAB domain THIMO_RS03545 IPR003382 Flavoprotein THIMO_RS03545 IPR035929 CoaB-like superfamily THIMO_RS03545 IPR036551 Flavin prenyltransferase-like THIMO_RS03545 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC THIMO_RS03545 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal THIMO_RS03550 IPR029054 dUTPase-like THIMO_RS03550 IPR036157 dUTPase-like superfamily THIMO_RS03550 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase THIMO_RS03550 IPR033704 dUTPase, trimeric THIMO_RS03555 IPR005843 Alpha-D-phosphohexomutase, C-terminal THIMO_RS03555 IPR016066 Alpha-D-phosphohexomutase, conserved site THIMO_RS03555 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I THIMO_RS03555 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III THIMO_RS03555 IPR005841 Alpha-D-phosphohexomutase superfamily THIMO_RS03555 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily THIMO_RS03555 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III THIMO_RS03555 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II THIMO_RS03560 IPR036393 Acetylglutamate kinase-like superfamily THIMO_RS03560 IPR041727 N-Acetyl-L-glutamate kinase, cyclic THIMO_RS03560 IPR001057 Glutamate/acetylglutamate kinase THIMO_RS03560 IPR001048 Aspartate/glutamate/uridylate kinase THIMO_RS03560 IPR004662 Acetylglutamate kinase family THIMO_RS03560 IPR037528 Acetylglutamate kinase ArgB THIMO_RS03570 IPR023031 Orotate phosphoribosyltransferase THIMO_RS03570 IPR004467 Orotate phosphoribosyl transferase domain THIMO_RS03570 IPR029057 Phosphoribosyltransferase-like THIMO_RS03570 IPR000836 Phosphoribosyltransferase domain THIMO_RS03585 IPR005228 Conserved hypothetical protein CHP00251 THIMO_RS03585 IPR036591 YggU-like superfamily THIMO_RS03585 IPR003746 Protein of unknown function DUF167 THIMO_RS03590 IPR003425 CCB3/YggT THIMO_RS03595 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain THIMO_RS03595 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal THIMO_RS03595 IPR000304 Pyrroline-5-carboxylate reductase THIMO_RS03595 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THIMO_RS03595 IPR036291 NAD(P)-binding domain superfamily THIMO_RS03600 IPR029066 PLP-binding barrel THIMO_RS03600 IPR011078 Pyridoxal phosphate homeostasis protein THIMO_RS03600 IPR001608 Alanine racemase, N-terminal THIMO_RS03605 IPR020922 dITP/XTP pyrophosphatase THIMO_RS03605 IPR002637 Ham1-like protein THIMO_RS03605 IPR029001 Inosine triphosphate pyrophosphatase-like THIMO_RS03610 IPR027408 PNPase/RNase PH domain superfamily THIMO_RS03610 IPR036345 Exoribonuclease, PH domain 2 superfamily THIMO_RS03610 IPR018336 Ribonuclease PH, conserved site THIMO_RS03610 IPR002381 Ribonuclease PH, bacterial-type THIMO_RS03610 IPR001247 Exoribonuclease, phosphorolytic domain 1 THIMO_RS03610 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS03610 IPR015847 Exoribonuclease, phosphorolytic domain 2 THIMO_RS03615 IPR008271 Serine/threonine-protein kinase, active site THIMO_RS03615 IPR017441 Protein kinase, ATP binding site THIMO_RS03615 IPR032710 NTF2-like domain superfamily THIMO_RS03615 IPR011009 Protein kinase-like domain superfamily THIMO_RS03615 IPR000719 Protein kinase domain THIMO_RS03620 IPR005229 Conserved hypothetical protein CHP00255 THIMO_RS03620 IPR013551 Domain of unknown function DUF1732 THIMO_RS03620 IPR013527 YicC-like, N-terminal THIMO_RS03625 IPR008145 Guanylate kinase/L-type calcium channel beta subunit THIMO_RS03625 IPR008144 Guanylate kinase-like domain THIMO_RS03625 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03625 IPR020590 Guanylate kinase, conserved site THIMO_RS03625 IPR017665 Guanylate kinase THIMO_RS03630 IPR003716 DNA-directed RNA polymerase, omega subunit THIMO_RS03630 IPR036161 RPB6/omega subunit-like superfamily THIMO_RS03630 IPR006110 RNA polymerase, subunit omega/K/RPB6 THIMO_RS03630 IPR012293 RNA polymerase subunit, RPB6/omega THIMO_RS03635 IPR033655 RelA, TGS domain THIMO_RS03635 IPR012676 TGS-like THIMO_RS03635 IPR004095 TGS THIMO_RS03635 IPR002912 ACT domain THIMO_RS03635 IPR004811 RelA/SpoT family THIMO_RS03635 IPR003607 HD/PDEase domain THIMO_RS03635 IPR012675 Beta-grasp domain superfamily THIMO_RS03635 IPR007685 RelA/SpoT THIMO_RS03645 IPR019897 RidA, conserved site THIMO_RS03645 IPR035959 RutC-like superfamily THIMO_RS03645 IPR006175 YjgF/YER057c/UK114 family THIMO_RS03645 IPR006056 RidA family THIMO_RS03650 IPR018236 SAICAR synthetase, conserved site THIMO_RS03650 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase THIMO_RS03650 IPR028923 SAICAR synthetase/ADE2, N-terminal THIMO_RS03660 IPR001279 Metallo-beta-lactamase THIMO_RS03660 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THIMO_RS03660 IPR017782 Hydroxyacylglutathione hydrolase THIMO_RS03660 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain THIMO_RS03660 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain THIMO_RS03665 IPR005477 Deoxyxylulose-5-phosphate synthase THIMO_RS03665 IPR029061 Thiamin diphosphate-binding fold THIMO_RS03665 IPR033248 Transketolase, C-terminal domain THIMO_RS03665 IPR005474 Transketolase, N-terminal THIMO_RS03665 IPR005475 Transketolase-like, pyrimidine-binding domain THIMO_RS03665 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THIMO_RS03665 IPR020826 Transketolase binding site THIMO_RS03670 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS03670 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS03670 IPR000847 Transcription regulator HTH, LysR THIMO_RS03670 IPR005119 LysR, substrate-binding THIMO_RS03675 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily THIMO_RS03675 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I THIMO_RS03675 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal THIMO_RS03675 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal THIMO_RS03675 IPR036422 RuBisCO large subunit, N-terminal domain superfamily THIMO_RS03675 IPR033966 RuBisCO THIMO_RS03675 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site THIMO_RS03680 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily THIMO_RS03680 IPR000894 Ribulose bisphosphate carboxylase small chain, domain THIMO_RS03685 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS03685 IPR011006 CheY-like superfamily THIMO_RS03685 IPR000160 GGDEF domain THIMO_RS03685 IPR029787 Nucleotide cyclase THIMO_RS03690 IPR029061 Thiamin diphosphate-binding fold THIMO_RS03690 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THIMO_RS03690 IPR005475 Transketolase-like, pyrimidine-binding domain THIMO_RS03690 IPR033248 Transketolase, C-terminal domain THIMO_RS03715 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit THIMO_RS03715 IPR027394 Cytochrome-c3 hydrogenase, C-terminal THIMO_RS03715 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THIMO_RS03715 IPR001821 [NiFe]-hydrogenase, small subunit THIMO_RS03715 IPR006311 Twin-arginine translocation pathway, signal sequence THIMO_RS03715 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily THIMO_RS03715 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily THIMO_RS03730 IPR001501 Nickel-dependent hydrogenase, large subunit THIMO_RS03730 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site THIMO_RS03730 IPR029014 [NiFe]-hydrogenase, large subunit THIMO_RS03760 IPR003959 ATPase, AAA-type, core THIMO_RS03760 IPR022482 Proteasome ATPase THIMO_RS03760 IPR003593 AAA+ ATPase domain THIMO_RS03760 IPR003960 ATPase, AAA-type, conserved site THIMO_RS03760 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03760 IPR032501 Proteasomal ATPase OB C-terminal domain THIMO_RS03760 IPR041626 Proteasomal ATPase, N-terminal OB domain THIMO_RS03935 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS03935 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS03935 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS03935 IPR000014 PAS domain THIMO_RS03935 IPR005467 Histidine kinase domain THIMO_RS03935 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS03935 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS03940 IPR002078 RNA polymerase sigma factor 54 interaction domain THIMO_RS03940 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THIMO_RS03940 IPR025944 Sigma-54 interaction domain, conserved site THIMO_RS03940 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS03940 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS03940 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS03940 IPR009057 Homeobox-like domain superfamily THIMO_RS03940 IPR011006 CheY-like superfamily THIMO_RS03940 IPR003593 AAA+ ATPase domain THIMO_RS03940 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THIMO_RS03965 IPR005261 Conserved hypothetical protein CHP00659 THIMO_RS03965 IPR007300 CidB/LrgB family THIMO_RS03995 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS03995 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS03995 IPR029151 Periplasmic sensor-like domain superfamily THIMO_RS03995 IPR015387 LuxQ, periplasmic THIMO_RS03995 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS03995 IPR005467 Histidine kinase domain THIMO_RS03995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS03995 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS03995 IPR011006 CheY-like superfamily THIMO_RS03995 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS04005 IPR018375 Coproporphyrinogen III oxidase, conserved site THIMO_RS04005 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily THIMO_RS04005 IPR001260 Coproporphyrinogen III oxidase, aerobic THIMO_RS04030 IPR034904 Fe-S cluster assembly domain superfamily THIMO_RS04030 IPR002744 MIP18 family-like THIMO_RS04030 IPR000808 Mrp, conserved site THIMO_RS04030 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS04030 IPR019591 Mrp/NBP35 ATP-binding protein THIMO_RS04030 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 THIMO_RS04045 IPR007862 Adenylate kinase, active site lid domain THIMO_RS04045 IPR033690 Adenylate kinase, conserved site THIMO_RS04045 IPR000850 Adenylate kinase/UMP-CMP kinase THIMO_RS04045 IPR006259 Adenylate kinase subfamily THIMO_RS04045 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS04050 IPR013766 Thioredoxin domain THIMO_RS04050 IPR017937 Thioredoxin, conserved site THIMO_RS04050 IPR005746 Thioredoxin THIMO_RS04050 IPR036249 Thioredoxin-like superfamily THIMO_RS04060 IPR039538 BetI-type transcriptional repressor, C-terminal THIMO_RS04060 IPR023772 DNA-binding HTH domain, TetR-type, conserved site THIMO_RS04060 IPR009057 Homeobox-like domain superfamily THIMO_RS04060 IPR017757 Transcriptional repressor BetI THIMO_RS04060 IPR001647 DNA-binding HTH domain, TetR-type THIMO_RS04060 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily THIMO_RS04065 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THIMO_RS04065 IPR006143 RND efflux pump, membrane fusion protein THIMO_RS04070 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THIMO_RS04070 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 THIMO_RS04070 IPR001036 Acriflavin resistance protein THIMO_RS04075 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification THIMO_RS04075 IPR008854 TPMT family THIMO_RS04075 IPR025835 Thiopurine S-methyltransferase THIMO_RS04075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS04080 IPR001633 EAL domain THIMO_RS04080 IPR029787 Nucleotide cyclase THIMO_RS04080 IPR005330 MHYT domain THIMO_RS04080 IPR000160 GGDEF domain THIMO_RS04080 IPR035919 EAL domain superfamily THIMO_RS04085 IPR001633 EAL domain THIMO_RS04085 IPR000160 GGDEF domain THIMO_RS04085 IPR035919 EAL domain superfamily THIMO_RS04085 IPR005330 MHYT domain THIMO_RS04085 IPR029787 Nucleotide cyclase THIMO_RS04100 IPR000917 Sulfatase, N-terminal THIMO_RS04100 IPR040423 Phosphoethanolamine transferase THIMO_RS04100 IPR012549 Phosphoethanolamine transferase, N-terminal THIMO_RS04100 IPR017850 Alkaline-phosphatase-like, core domain superfamily THIMO_RS04155 IPR000700 PAS-associated, C-terminal THIMO_RS04155 IPR035965 PAS domain superfamily THIMO_RS04155 IPR002645 STAS domain THIMO_RS04155 IPR001610 PAC motif THIMO_RS04155 IPR036513 STAS domain superfamily THIMO_RS04155 IPR000014 PAS domain THIMO_RS04170 IPR033755 PdxS/SNZ N-terminal domain THIMO_RS04170 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ THIMO_RS04170 IPR013785 Aldolase-type TIM barrel THIMO_RS04170 IPR011060 Ribulose-phosphate binding barrel THIMO_RS04175 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO THIMO_RS04175 IPR029062 Class I glutamine amidotransferase-like THIMO_RS04185 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase THIMO_RS04185 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS04185 IPR029058 Alpha/Beta hydrolase fold THIMO_RS04190 IPR004520 tRNA modification GTPase MnmE THIMO_RS04190 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS04190 IPR005225 Small GTP-binding protein domain THIMO_RS04190 IPR018948 GTP-binding protein TrmE, N-terminal THIMO_RS04190 IPR006073 GTP binding domain THIMO_RS04190 IPR031168 TrmE-type guanine nucleotide-binding domain THIMO_RS04190 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 THIMO_RS04190 IPR025867 MnmE, helical domain THIMO_RS04190 IPR027368 tRNA modification GTPase MnmE domain 2 THIMO_RS04205 IPR025110 AMP-binding enzyme, C-terminal domain THIMO_RS04205 IPR020845 AMP-binding, conserved site THIMO_RS04205 IPR010192 2-succinylbenzoate--CoA ligase THIMO_RS04205 IPR000873 AMP-dependent synthetase/ligase THIMO_RS04205 IPR042099 AMP-dependent synthetase-like superfamily THIMO_RS04210 IPR033966 RuBisCO THIMO_RS04210 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal THIMO_RS04210 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily THIMO_RS04210 IPR036422 RuBisCO large subunit, N-terminal domain superfamily THIMO_RS04210 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal THIMO_RS04215 IPR001602 Uncharacterised protein family UPF0047 THIMO_RS04215 IPR035917 YjbQ-like superfamily THIMO_RS04225 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 THIMO_RS04225 IPR015797 NUDIX hydrolase-like domain superfamily THIMO_RS04225 IPR000086 NUDIX hydrolase domain THIMO_RS04255 IPR010927 Type IV conjugative transfer system protein TraH THIMO_RS04290 IPR029016 GAF-like domain superfamily THIMO_RS04290 IPR009057 Homeobox-like domain superfamily THIMO_RS04290 IPR010113 Nif-specific regulatory protein THIMO_RS04290 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS04290 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS04290 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THIMO_RS04290 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THIMO_RS04290 IPR025944 Sigma-54 interaction domain, conserved site THIMO_RS04290 IPR003593 AAA+ ATPase domain THIMO_RS04290 IPR003018 GAF domain THIMO_RS04290 IPR002078 RNA polymerase sigma factor 54 interaction domain THIMO_RS04350 IPR003607 HD/PDEase domain THIMO_RS04355 IPR036277 SMCs flexible hinge superfamily THIMO_RS04355 IPR010935 SMCs flexible hinge THIMO_RS04355 IPR024704 Structural maintenance of chromosomes protein THIMO_RS04355 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS04355 IPR003395 RecF/RecN/SMC, N-terminal THIMO_RS04355 IPR011890 Structural maintenance of chromosomes protein, prokaryotic THIMO_RS04360 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily THIMO_RS04360 IPR011919 Cell division protein ZipA THIMO_RS04360 IPR007449 ZipA, C-terminal FtsZ-binding domain THIMO_RS04365 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type THIMO_RS04365 IPR004150 NAD-dependent DNA ligase, OB-fold THIMO_RS04365 IPR001357 BRCT domain THIMO_RS04365 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 THIMO_RS04365 IPR013840 NAD-dependent DNA ligase, N-terminal THIMO_RS04365 IPR013839 NAD-dependent DNA ligase, adenylation THIMO_RS04365 IPR001679 NAD-dependent DNA ligase THIMO_RS04365 IPR033136 NAD-dependent DNA ligase, conserved site THIMO_RS04365 IPR018239 NAD-dependent DNA ligase, active site THIMO_RS04365 IPR041663 DisA/LigA, helix-hairpin-helix motif THIMO_RS04365 IPR036420 BRCT domain superfamily THIMO_RS04365 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS04365 IPR010994 RuvA domain 2-like THIMO_RS04375 IPR001148 Alpha carbonic anhydrase domain THIMO_RS04375 IPR018338 Carbonic anhydrase, alpha-class, conserved site THIMO_RS04375 IPR023561 Carbonic anhydrase, alpha-class THIMO_RS04375 IPR036398 Alpha carbonic anhydrase domain superfamily THIMO_RS04375 IPR041891 Carbonic anhydrase, prokaryotic-like THIMO_RS04380 IPR013780 Glycosyl hydrolase, all-beta THIMO_RS04380 IPR013783 Immunoglobulin-like fold THIMO_RS04380 IPR017853 Glycoside hydrolase superfamily THIMO_RS04380 IPR011837 Glycogen debranching enzyme, GlgX type THIMO_RS04380 IPR014756 Immunoglobulin E-set THIMO_RS04380 IPR006047 Glycosyl hydrolase, family 13, catalytic domain THIMO_RS04380 IPR004193 Glycoside hydrolase, family 13, N-terminal THIMO_RS04385 IPR006372 Bacteriochlorophyll/chlorophyll synthetase THIMO_RS04385 IPR000537 UbiA prenyltransferase family THIMO_RS04390 IPR010253 Geranylgeranyl reductase, plant/prokaryotic THIMO_RS04390 IPR011777 Geranylgeranyl reductase family THIMO_RS04390 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS04395 IPR005856 Cysteine synthase THIMO_RS04395 IPR005859 Cysteine synthase CysK THIMO_RS04395 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site THIMO_RS04395 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THIMO_RS04395 IPR001926 Pyridoxal-phosphate dependent enzyme THIMO_RS04415 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS04415 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain THIMO_RS04415 IPR005119 LysR, substrate-binding THIMO_RS04415 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS04415 IPR000847 Transcription regulator HTH, LysR THIMO_RS04420 IPR003593 AAA+ ATPase domain THIMO_RS04420 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS04420 IPR017871 ABC transporter, conserved site THIMO_RS04420 IPR003439 ABC transporter-like THIMO_RS04435 IPR002751 Metal transport protein CbiM/NikMN THIMO_RS04450 IPR001095 Acetyl-CoA carboxylase, alpha subunit THIMO_RS04450 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal THIMO_RS04450 IPR029045 ClpP/crotonase-like domain superfamily THIMO_RS04455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS04455 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal THIMO_RS04455 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal THIMO_RS04455 IPR012094 tRNA(Ile)-lysidine synthase THIMO_RS04455 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal THIMO_RS04455 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain THIMO_RS04465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS04465 IPR003333 Mycolic acid cyclopropane synthase THIMO_RS04485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS04485 IPR035906 MetI-like superfamily THIMO_RS04490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS04490 IPR035906 MetI-like superfamily THIMO_RS04495 IPR013611 Transport-associated OB, type 2 THIMO_RS04495 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit THIMO_RS04495 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS04495 IPR017871 ABC transporter, conserved site THIMO_RS04495 IPR003593 AAA+ ATPase domain THIMO_RS04495 IPR003439 ABC transporter-like THIMO_RS04495 IPR008995 Molybdate/tungstate binding, C-terminal THIMO_RS04500 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein THIMO_RS04500 IPR006059 Bacterial extracellular solute-binding protein THIMO_RS04505 IPR011657 Concentrative nucleoside transporter C-terminal domain THIMO_RS04505 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial THIMO_RS04505 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain THIMO_RS04505 IPR008276 Concentrative nucleoside transporter THIMO_RS04505 IPR002668 Concentrative nucleoside transporter N-terminal domain THIMO_RS04510 IPR016154 Heat shock protein Hsp33, C-terminal THIMO_RS04510 IPR016153 Heat shock protein Hsp33, N-terminal THIMO_RS04510 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily THIMO_RS04510 IPR000397 Heat shock protein Hsp33 THIMO_RS04515 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily THIMO_RS04515 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE THIMO_RS04545 IPR000160 GGDEF domain THIMO_RS04545 IPR005330 MHYT domain THIMO_RS04545 IPR001633 EAL domain THIMO_RS04545 IPR035919 EAL domain superfamily THIMO_RS04545 IPR029787 Nucleotide cyclase THIMO_RS04550 IPR011649 KaiB domain THIMO_RS04550 IPR036249 Thioredoxin-like superfamily THIMO_RS04550 IPR013474 Circadian clock protein KaiB THIMO_RS04550 IPR039022 Circadian clock protein KaiB-like THIMO_RS04555 IPR014774 KaiC-like domain THIMO_RS04555 IPR010624 KaiC domain THIMO_RS04555 IPR003593 AAA+ ATPase domain THIMO_RS04555 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS04555 IPR030665 Circadian clock protein kinase KaiC THIMO_RS04560 IPR001753 Enoyl-CoA hydratase/isomerase THIMO_RS04560 IPR014748 Enoyl-CoA hydratase, C-terminal THIMO_RS04560 IPR029045 ClpP/crotonase-like domain superfamily THIMO_RS04560 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site THIMO_RS04570 IPR019591 Mrp/NBP35 ATP-binding protein THIMO_RS04570 IPR000808 Mrp, conserved site THIMO_RS04570 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS04570 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 THIMO_RS04575 IPR033911 Methioninyl-tRNA synthetase core domain THIMO_RS04575 IPR023458 Methionine-tRNA ligase, type 1 THIMO_RS04575 IPR014758 Methionyl-tRNA synthetase THIMO_RS04575 IPR015413 Methionyl/Leucyl tRNA synthetase THIMO_RS04575 IPR029038 Methionyl-tRNA synthetase, Zn-domain THIMO_RS04575 IPR002547 tRNA-binding domain THIMO_RS04575 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS04575 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain THIMO_RS04575 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THIMO_RS04575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS04575 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding THIMO_RS04575 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal THIMO_RS04580 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA THIMO_RS04580 IPR003667 NqrDE/RnfAE THIMO_RS04585 IPR007202 4Fe-4S domain THIMO_RS04585 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS04585 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria THIMO_RS04585 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB THIMO_RS04585 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS04590 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily THIMO_RS04590 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain THIMO_RS04590 IPR019554 Soluble ligand binding domain THIMO_RS04590 IPR026902 RnfC Barrel sandwich hybrid domain THIMO_RS04590 IPR009051 Alpha-helical ferredoxin THIMO_RS04590 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC THIMO_RS04590 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS04590 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS04595 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD THIMO_RS04595 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D THIMO_RS04600 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG THIMO_RS04600 IPR007329 FMN-binding THIMO_RS04605 IPR010968 Ion-translocating oxidoreductase complex subunit E THIMO_RS04605 IPR003667 NqrDE/RnfAE THIMO_RS04615 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site THIMO_RS04615 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type THIMO_RS04620 IPR011008 Dimeric alpha-beta barrel THIMO_RS04620 IPR005545 YCII-related THIMO_RS04625 IPR006008 Intracellular septation protein A THIMO_RS04630 IPR003141 Polymerase/histidinol phosphatase, N-terminal THIMO_RS04630 IPR004013 PHP domain THIMO_RS04630 IPR016195 Polymerase/histidinol phosphatase-like THIMO_RS04635 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily THIMO_RS04635 IPR006070 YrdC-like domain THIMO_RS04640 IPR008915 Peptidase M50 THIMO_RS04645 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THIMO_RS04645 IPR002305 Aminoacyl-tRNA synthetase, class Ic THIMO_RS04645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS04645 IPR002306 Tryptophan-tRNA ligase THIMO_RS04650 IPR003768 Segregation and condensation protein A THIMO_RS04655 IPR005234 Chromosome segregation/condensation protein ScpB THIMO_RS04655 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS04655 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS04660 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal THIMO_RS04660 IPR005835 Nucleotidyl transferase domain THIMO_RS04660 IPR014710 RmlC-like jelly roll fold THIMO_RS04660 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS04660 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase THIMO_RS04660 IPR011051 RmlC-like cupin domain superfamily THIMO_RS04665 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III THIMO_RS04665 IPR005843 Alpha-D-phosphohexomutase, C-terminal THIMO_RS04665 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III THIMO_RS04665 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I THIMO_RS04665 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily THIMO_RS04665 IPR016066 Alpha-D-phosphohexomutase, conserved site THIMO_RS04665 IPR005841 Alpha-D-phosphohexomutase superfamily THIMO_RS04665 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II THIMO_RS04720 IPR001962 Asparagine synthase THIMO_RS04720 IPR029055 Nucleophile aminohydrolases, N-terminal THIMO_RS04720 IPR017932 Glutamine amidotransferase type 2 domain THIMO_RS04720 IPR033738 Asparagine synthase, N-terminal domain THIMO_RS04720 IPR006426 Asparagine synthase, glutamine-hydrolyzing THIMO_RS04760 IPR029055 Nucleophile aminohydrolases, N-terminal THIMO_RS04760 IPR006426 Asparagine synthase, glutamine-hydrolyzing THIMO_RS04760 IPR001962 Asparagine synthase THIMO_RS04760 IPR033738 Asparagine synthase, N-terminal domain THIMO_RS04760 IPR017932 Glutamine amidotransferase type 2 domain THIMO_RS04770 IPR001296 Glycosyl transferase, family 1 THIMO_RS04770 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THIMO_RS04770 IPR017814 Mycothiol biosynthesis protein, MshA THIMO_RS04775 IPR001173 Glycosyltransferase 2-like THIMO_RS04775 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS04800 IPR012337 Ribonuclease H-like superfamily THIMO_RS04800 IPR001584 Integrase, catalytic core THIMO_RS04800 IPR025948 HTH-like domain THIMO_RS04800 IPR036397 Ribonuclease H superfamily THIMO_RS04805 IPR004104 Oxidoreductase, C-terminal THIMO_RS04805 IPR000683 Oxidoreductase, N-terminal THIMO_RS04805 IPR036291 NAD(P)-binding domain superfamily THIMO_RS04810 IPR013216 Methyltransferase type 11 THIMO_RS04810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS04835 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like THIMO_RS04835 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain THIMO_RS04880 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS04880 IPR009057 Homeobox-like domain superfamily THIMO_RS04880 IPR002514 Transposase IS3/IS911family THIMO_RS04885 IPR012337 Ribonuclease H-like superfamily THIMO_RS04885 IPR001584 Integrase, catalytic core THIMO_RS04885 IPR025948 HTH-like domain THIMO_RS04885 IPR036397 Ribonuclease H superfamily THIMO_RS04895 IPR001279 Metallo-beta-lactamase THIMO_RS04895 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THIMO_RS04895 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain THIMO_RS04895 IPR022712 Beta-Casp domain THIMO_RS04900 IPR016092 FeS cluster insertion protein THIMO_RS04900 IPR000361 FeS cluster biogenesis THIMO_RS04900 IPR017870 FeS cluster insertion, C-terminal, conserved site THIMO_RS04900 IPR023063 FeS cluster insertion protein ErpA THIMO_RS04900 IPR035903 HesB-like domain superfamily THIMO_RS04910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS04910 IPR002305 Aminoacyl-tRNA synthetase, class Ic THIMO_RS04910 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THIMO_RS04910 IPR024088 Tyrosine-tRNA ligase, bacterial-type THIMO_RS04910 IPR002942 RNA-binding S4 domain THIMO_RS04910 IPR036986 RNA-binding S4 domain superfamily THIMO_RS04910 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 THIMO_RS04910 IPR002307 Tyrosine-tRNA ligase THIMO_RS04940 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC THIMO_RS04940 IPR016195 Polymerase/histidinol phosphatase-like THIMO_RS04945 IPR006322 Glutathione reductase, eukaryote/bacterial THIMO_RS04945 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS04945 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site THIMO_RS04945 IPR023753 FAD/NAD(P)-binding domain THIMO_RS04945 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily THIMO_RS04945 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THIMO_RS04945 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I THIMO_RS04950 IPR011767 Glutaredoxin active site THIMO_RS04950 IPR002109 Glutaredoxin THIMO_RS04950 IPR037944 Peroxiredoxin-5-like THIMO_RS04950 IPR013740 Redoxin THIMO_RS04950 IPR013766 Thioredoxin domain THIMO_RS04950 IPR036249 Thioredoxin-like superfamily THIMO_RS04955 IPR031304 Transglycosylase SLT domain 2 THIMO_RS04955 IPR023346 Lysozyme-like domain superfamily THIMO_RS04955 IPR011757 Lytic transglycosylase MltB THIMO_RS04960 IPR033454 RecG, wedge domain THIMO_RS04960 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS04960 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS04960 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS04960 IPR011545 DEAD/DEAH box helicase domain THIMO_RS04960 IPR004609 ATP-dependent DNA helicase RecG THIMO_RS04960 IPR001650 Helicase, C-terminal THIMO_RS04965 IPR030470 UbiA prenyltransferase conserved site THIMO_RS04965 IPR000537 UbiA prenyltransferase family THIMO_RS04965 IPR039653 Prenyltransferase THIMO_RS04965 IPR006370 4-hydroxybenzoate polyprenyltransferase-like THIMO_RS04975 IPR001977 Dephospho-CoA kinase THIMO_RS04975 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS04980 IPR010627 Peptidase A24A, N-terminal THIMO_RS04980 IPR014032 Peptidase A24A, prepilin type IV, bacterial THIMO_RS04980 IPR000045 Prepilin type IV endopeptidase, peptidase domain THIMO_RS04985 IPR042094 Type II secretion system F domain superfamily THIMO_RS04985 IPR003004 GspF/PilC family THIMO_RS04985 IPR001992 Type II secretion system conserved site THIMO_RS04985 IPR018076 Type II secretion system F domain THIMO_RS04990 IPR007831 General secretory system II, protein E, N-terminal THIMO_RS04990 IPR037257 General secretory system II, protein E, N-terminal superfamily THIMO_RS04990 IPR042181 Type II secretion system, protein E, N-terminal THIMO_RS04990 IPR013374 ATPase, type IV, pilus assembly, PilB THIMO_RS04990 IPR001482 Type II/IV secretion system protein THIMO_RS04990 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05000 IPR000873 AMP-dependent synthetase/ligase THIMO_RS05000 IPR020845 AMP-binding, conserved site THIMO_RS05000 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain THIMO_RS05000 IPR025110 AMP-binding enzyme, C-terminal domain THIMO_RS05000 IPR042099 AMP-dependent synthetase-like superfamily THIMO_RS05000 IPR011904 Acetate-CoA ligase THIMO_RS05005 IPR008928 Six-hairpin glycosidase superfamily THIMO_RS05005 IPR012341 Six-hairpin glycosidase-like superfamily THIMO_RS05005 IPR004879 Domain of unknown function DUF255 THIMO_RS05005 IPR024705 Spermatogenesis-associated protein 20 THIMO_RS05005 IPR036249 Thioredoxin-like superfamily THIMO_RS05010 IPR011076 Malate synthase-like superfamily THIMO_RS05010 IPR023310 Malate synthase G, beta sub-domain THIMO_RS05010 IPR001465 Malate synthase THIMO_RS05010 IPR006253 Malate synthase G THIMO_RS05025 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA THIMO_RS05025 IPR042119 QueA, domain 2 THIMO_RS05025 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily THIMO_RS05025 IPR042118 QueA, domain 1 THIMO_RS05030 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily THIMO_RS05030 IPR002569 Peptide methionine sulphoxide reductase MsrA THIMO_RS05040 IPR004803 tRNA-guanine transglycosylase THIMO_RS05040 IPR036511 Queuine tRNA-ribosyltransferase-like THIMO_RS05040 IPR002616 tRNA-guanine(15) transglycosylase-like THIMO_RS05045 IPR003849 Preprotein translocase YajC THIMO_RS05050 IPR027398 SecD export protein N-terminal TM domain THIMO_RS05050 IPR022645 Protein-export membrane protein SecD/SecF, bacterial THIMO_RS05050 IPR005791 Protein translocase subunit SecD THIMO_RS05050 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site THIMO_RS05050 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial THIMO_RS05050 IPR001036 Acriflavin resistance protein THIMO_RS05055 IPR005665 Protein-export membrane protein SecF, bacterial THIMO_RS05055 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site THIMO_RS05055 IPR022645 Protein-export membrane protein SecD/SecF, bacterial THIMO_RS05055 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial THIMO_RS05060 IPR020583 Inositol monophosphatase, metal-binding site THIMO_RS05060 IPR020550 Inositol monophosphatase, conserved site THIMO_RS05060 IPR033942 Inositol monophosphatase THIMO_RS05060 IPR000760 Inositol monophosphatase-like THIMO_RS05060 IPR022337 Inositol monophosphatase, SuhB THIMO_RS05065 IPR004384 RNA methyltransferase TrmJ/LasT THIMO_RS05065 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THIMO_RS05065 IPR001537 tRNA/rRNA methyltransferase, SpoU type THIMO_RS05065 IPR029028 Alpha/beta knot methyltransferases THIMO_RS05070 IPR018357 Hexapeptide transferase, conserved site THIMO_RS05070 IPR001451 Hexapeptide repeat THIMO_RS05070 IPR011004 Trimeric LpxA-like superfamily THIMO_RS05070 IPR005881 Serine O-acetyltransferase THIMO_RS05070 IPR042122 Serine acetyltransferase, N-terminal domain superfamily THIMO_RS05080 IPR015947 PUA-like superfamily THIMO_RS05080 IPR029028 Alpha/beta knot methyltransferases THIMO_RS05080 IPR006700 Ribosomal RNA small subunit methyltransferase E THIMO_RS05080 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THIMO_RS05085 IPR006696 Protein of unknown function DUF423 THIMO_RS05095 IPR000362 Fumarate lyase family THIMO_RS05095 IPR029419 Argininosuccinate lyase, C-terminal THIMO_RS05095 IPR009049 Argininosuccinate lyase THIMO_RS05095 IPR020557 Fumarate lyase, conserved site THIMO_RS05095 IPR008948 L-Aspartase-like THIMO_RS05095 IPR022761 Fumarate lyase, N-terminal THIMO_RS05115 IPR012338 Beta-lactamase/transpeptidase-like THIMO_RS05115 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C THIMO_RS05120 IPR036034 PDZ superfamily THIMO_RS05120 IPR011782 Peptidase S1C, Do THIMO_RS05120 IPR001940 Peptidase S1C THIMO_RS05120 IPR001478 PDZ domain THIMO_RS05120 IPR009003 Peptidase S1, PA clan THIMO_RS05125 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain THIMO_RS05130 IPR024072 Dihydrofolate reductase-like domain superfamily THIMO_RS05130 IPR012259 Dihydrofolate reductase THIMO_RS05130 IPR001796 Dihydrofolate reductase domain THIMO_RS05130 IPR017925 Dihydrofolate reductase conserved site THIMO_RS05135 IPR004394 Protein Iojap/ribosomal silencing factor RsfS THIMO_RS05140 IPR004821 Cytidyltransferase-like domain THIMO_RS05140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS05140 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase THIMO_RS05145 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site THIMO_RS05145 IPR000965 GPR domain THIMO_RS05145 IPR016162 Aldehyde dehydrogenase, N-terminal THIMO_RS05145 IPR012134 Glutamate-5-semialdehyde dehydrogenase THIMO_RS05145 IPR015590 Aldehyde dehydrogenase domain THIMO_RS05145 IPR016163 Aldehyde dehydrogenase, C-terminal THIMO_RS05145 IPR016161 Aldehyde/histidinol dehydrogenase THIMO_RS05155 IPR007485 LPS-assembly lipoprotein LptE THIMO_RS05160 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain THIMO_RS05160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS05160 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding THIMO_RS05160 IPR025709 Leucyl-tRNA synthetase, editing domain THIMO_RS05160 IPR002302 Leucine-tRNA ligase THIMO_RS05160 IPR002300 Aminoacyl-tRNA synthetase, class Ia THIMO_RS05160 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THIMO_RS05160 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding THIMO_RS05165 IPR006258 Dihydrolipoamide dehydrogenase THIMO_RS05165 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS05165 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THIMO_RS05165 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I THIMO_RS05165 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily THIMO_RS05165 IPR023753 FAD/NAD(P)-binding domain THIMO_RS05165 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site THIMO_RS05170 IPR036625 E3-binding domain superfamily THIMO_RS05170 IPR004167 Peripheral subunit-binding domain THIMO_RS05170 IPR011053 Single hybrid motif THIMO_RS05170 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily THIMO_RS05170 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site THIMO_RS05170 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain THIMO_RS05170 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex THIMO_RS05170 IPR000089 Biotin/lipoyl attachment THIMO_RS05175 IPR005474 Transketolase, N-terminal THIMO_RS05175 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THIMO_RS05175 IPR029061 Thiamin diphosphate-binding fold THIMO_RS05175 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal THIMO_RS05175 IPR041621 Pyruvate dehydrogenase E1 component, middle domain THIMO_RS05175 IPR004660 Pyruvate dehydrogenase E1 component THIMO_RS05220 IPR036748 MTH938-like superfamily THIMO_RS05220 IPR007523 NDUFAF3/Mth938 domain-containing protein THIMO_RS05225 IPR004839 Aminotransferase, class I/classII THIMO_RS05225 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS05225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS05225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS05230 IPR019811 Homoserine dehydrogenase, conserved site THIMO_RS05230 IPR002912 ACT domain THIMO_RS05230 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding THIMO_RS05230 IPR016204 Homoserine dehydrogenase THIMO_RS05230 IPR001342 Homoserine dehydrogenase, catalytic THIMO_RS05230 IPR036291 NAD(P)-binding domain superfamily THIMO_RS05240 IPR000952 AB hydrolase 4, conserved site THIMO_RS05240 IPR012020 AB hydrolase 4 family THIMO_RS05240 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS05240 IPR029058 Alpha/Beta hydrolase fold THIMO_RS05245 IPR003423 Outer membrane efflux protein THIMO_RS05245 IPR010130 Type I secretion outer membrane protein, TolC THIMO_RS05250 IPR000453 Chorismate synthase THIMO_RS05250 IPR035904 Chorismate synthase AroC superfamily THIMO_RS05250 IPR020541 Chorismate synthase, conserved site THIMO_RS05255 IPR020846 Major facilitator superfamily domain THIMO_RS05255 IPR036259 MFS transporter superfamily THIMO_RS05255 IPR024989 Major facilitator superfamily associated domain THIMO_RS05260 IPR011837 Glycogen debranching enzyme, GlgX type THIMO_RS05260 IPR013780 Glycosyl hydrolase, all-beta THIMO_RS05260 IPR004193 Glycoside hydrolase, family 13, N-terminal THIMO_RS05260 IPR014756 Immunoglobulin E-set THIMO_RS05260 IPR013783 Immunoglobulin-like fold THIMO_RS05260 IPR006047 Glycosyl hydrolase, family 13, catalytic domain THIMO_RS05260 IPR017853 Glycoside hydrolase superfamily THIMO_RS05275 IPR017871 ABC transporter, conserved site THIMO_RS05275 IPR003593 AAA+ ATPase domain THIMO_RS05275 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl THIMO_RS05275 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05275 IPR003439 ABC transporter-like THIMO_RS05280 IPR003453 ABC transport permease subunit MlaE, Proteobacteria THIMO_RS05280 IPR030802 ABC transporter permease MalE THIMO_RS05285 IPR036680 Sporulation-like domain superfamily THIMO_RS05285 IPR007730 Sporulation-like domain THIMO_RS05285 IPR012997 Rare lipoprotein A THIMO_RS05285 IPR036908 RlpA-like domain superfamily THIMO_RS05285 IPR009009 RlpA-like protein, double-psi beta-barrel domain THIMO_RS05285 IPR034718 Endolytic peptidoglycan transglycosylase RlpA THIMO_RS05295 IPR001952 Alkaline phosphatase THIMO_RS05295 IPR018299 Alkaline phosphatase, active site THIMO_RS05295 IPR017850 Alkaline-phosphatase-like, core domain superfamily THIMO_RS05305 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS05305 IPR029058 Alpha/Beta hydrolase fold THIMO_RS05320 IPR036465 von Willebrand factor A-like domain superfamily THIMO_RS05320 IPR002035 von Willebrand factor, type A THIMO_RS05320 IPR024163 Aerotolerance regulator, N-terminal THIMO_RS05320 IPR022933 Uncharacterised protein family UPF0353 THIMO_RS05325 IPR033881 von Willebrand factor domain BatA-type THIMO_RS05325 IPR002035 von Willebrand factor, type A THIMO_RS05325 IPR036465 von Willebrand factor A-like domain superfamily THIMO_RS05335 IPR002881 Domain of unknown function DUF58 THIMO_RS05335 IPR036465 von Willebrand factor A-like domain superfamily THIMO_RS05340 IPR041628 ChlI/MoxR, AAA lid domain THIMO_RS05340 IPR011703 ATPase, AAA-3 THIMO_RS05340 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05350 IPR000795 Transcription factor, GTP-binding domain THIMO_RS05350 IPR009000 Translation protein, beta-barrel domain superfamily THIMO_RS05350 IPR005225 Small GTP-binding protein domain THIMO_RS05350 IPR042116 GTP-binding protein TypA/BipA, C-terminal THIMO_RS05350 IPR035651 BipA, domain V THIMO_RS05350 IPR004161 Translation elongation factor EFTu-like, domain 2 THIMO_RS05350 IPR035647 EF-G domain III/V-like THIMO_RS05350 IPR000640 Elongation factor EFG, domain V-like THIMO_RS05350 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05350 IPR006298 GTP-binding protein TypA THIMO_RS05350 IPR031157 Tr-type G domain, conserved site THIMO_RS05370 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily THIMO_RS05370 IPR017941 Rieske [2Fe-2S] iron-sulphur domain THIMO_RS05375 IPR001539 Peptidase U32 THIMO_RS05380 IPR036206 Thiamin phosphate synthase superfamily THIMO_RS05380 IPR001539 Peptidase U32 THIMO_RS05385 IPR032432 Radical SAM, C-terminal extension THIMO_RS05385 IPR007197 Radical SAM THIMO_RS05385 IPR023404 Radical SAM, alpha/beta horseshoe THIMO_RS05385 IPR039661 ELP3/YhcC THIMO_RS05385 IPR005911 Protein YhcC-like THIMO_RS05385 IPR006638 Elp3/MiaB/NifB THIMO_RS05390 IPR029058 Alpha/Beta hydrolase fold THIMO_RS05390 IPR000639 Epoxide hydrolase-like THIMO_RS05390 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS05400 IPR038068 YcgL-like superfamily THIMO_RS05400 IPR036412 HAD-like superfamily THIMO_RS05400 IPR006379 HAD-superfamily hydrolase, subfamily IIB THIMO_RS05400 IPR023214 HAD superfamily THIMO_RS05400 IPR027354 YcgL domain THIMO_RS05400 IPR006380 Sucrose-phosphatase-like, N-terminal THIMO_RS05405 IPR029000 Cyclophilin-like domain superfamily THIMO_RS05405 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase THIMO_RS05405 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site THIMO_RS05405 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain THIMO_RS05420 IPR000847 Transcription regulator HTH, LysR THIMO_RS05420 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS05420 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS05420 IPR005119 LysR, substrate-binding THIMO_RS05430 IPR011761 ATP-grasp fold THIMO_RS05430 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS05430 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK THIMO_RS05430 IPR041107 RimK, PreATP-grasp domain THIMO_RS05430 IPR013651 ATP-grasp fold, RimK-type THIMO_RS05430 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX THIMO_RS05435 IPR001872 Peptidase A8, signal peptidase II THIMO_RS05440 IPR023585 Isoleucine-tRNA ligase, type 1 THIMO_RS05440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS05440 IPR010663 Zinc finger, FPG/IleRS-type THIMO_RS05440 IPR002301 Isoleucine-tRNA ligase THIMO_RS05440 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain THIMO_RS05440 IPR002300 Aminoacyl-tRNA synthetase, class Ia THIMO_RS05440 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THIMO_RS05440 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding THIMO_RS05440 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding THIMO_RS05440 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain THIMO_RS05445 IPR015864 FAD synthetase THIMO_RS05445 IPR002606 Riboflavin kinase, bacterial THIMO_RS05445 IPR023468 Riboflavin kinase THIMO_RS05445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS05445 IPR023465 Riboflavin kinase domain superfamily THIMO_RS05445 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic THIMO_RS05450 IPR004268 Peptidoglycan biosynthesis protein MurJ THIMO_RS05455 IPR001296 Glycosyl transferase, family 1 THIMO_RS05455 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THIMO_RS05460 IPR035965 PAS domain superfamily THIMO_RS05460 IPR001633 EAL domain THIMO_RS05460 IPR035919 EAL domain superfamily THIMO_RS05460 IPR013656 PAS fold-4 THIMO_RS05460 IPR000160 GGDEF domain THIMO_RS05460 IPR029787 Nucleotide cyclase THIMO_RS05460 IPR000014 PAS domain THIMO_RS05495 IPR004680 Citrate transporter-like domain THIMO_RS05495 IPR031312 Sodium/sulphate symporter, conserved site THIMO_RS05495 IPR006037 Regulator of K+ conductance, C-terminal THIMO_RS05495 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily THIMO_RS05500 IPR013830 SGNH hydrolase-type esterase domain THIMO_RS05500 IPR036514 SGNH hydrolase superfamily THIMO_RS05505 IPR024370 PBP domain THIMO_RS05505 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS THIMO_RS05510 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS05510 IPR011864 Phosphate ABC transporter, permease protein PstC THIMO_RS05510 IPR035906 MetI-like superfamily THIMO_RS05515 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS05515 IPR005672 Phosphate transport system permease protein PstA THIMO_RS05515 IPR035906 MetI-like superfamily THIMO_RS05520 IPR015850 ABC transporter, phosphate import, PstB THIMO_RS05520 IPR005670 Phosphate transport system permease protein 1 THIMO_RS05520 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05520 IPR003593 AAA+ ATPase domain THIMO_RS05520 IPR017871 ABC transporter, conserved site THIMO_RS05520 IPR003439 ABC transporter-like THIMO_RS05525 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS THIMO_RS05525 IPR024370 PBP domain THIMO_RS05535 IPR004488 Magnesium/cobalt transport protein CorA THIMO_RS05535 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB THIMO_RS05540 IPR011703 ATPase, AAA-3 THIMO_RS05540 IPR041628 ChlI/MoxR, AAA lid domain THIMO_RS05540 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05545 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG THIMO_RS05545 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS05545 IPR026904 GidA associated domain 3 THIMO_RS05545 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related THIMO_RS05545 IPR020595 MnmG-related, conserved site THIMO_RS05550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS05550 IPR003682 rRNA small subunit methyltransferase G THIMO_RS05555 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05555 IPR025669 AAA domain THIMO_RS05560 IPR003115 ParB/Sulfiredoxin THIMO_RS05560 IPR041468 ParB/Spo0J, HTH domain THIMO_RS05560 IPR004437 ParB/RepB/Spo0J partition protein THIMO_RS05560 IPR036086 ParB/Sulfiredoxin superfamily THIMO_RS05570 IPR035908 ATP synthase, F0 complex, subunit A superfamily THIMO_RS05570 IPR000568 ATP synthase, F0 complex, subunit A THIMO_RS05570 IPR023011 ATP synthase, F0 complex, subunit A, active site THIMO_RS05575 IPR002379 V-ATPase proteolipid subunit C-like domain THIMO_RS05575 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast THIMO_RS05575 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site THIMO_RS05575 IPR038662 F1F0 ATP synthase subunit C superfamily THIMO_RS05575 IPR000454 ATP synthase, F0 complex, subunit C THIMO_RS05575 IPR035921 F/V-ATP synthase subunit C superfamily THIMO_RS05580 IPR005864 ATP synthase, F0 complex, subunit b, bacterial THIMO_RS05580 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast THIMO_RS05580 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily THIMO_RS05585 IPR000711 ATPase, OSCP/delta subunit THIMO_RS05585 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily THIMO_RS05585 IPR020781 ATPase, OSCP/delta subunit, conserved site THIMO_RS05590 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain THIMO_RS05590 IPR005294 ATP synthase, F1 complex, alpha subunit THIMO_RS05590 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily THIMO_RS05590 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site THIMO_RS05590 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain THIMO_RS05590 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily THIMO_RS05590 IPR000793 ATP synthase, alpha subunit, C-terminal THIMO_RS05590 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THIMO_RS05590 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily THIMO_RS05590 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05595 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily THIMO_RS05595 IPR000131 ATP synthase, F1 complex, gamma subunit THIMO_RS05595 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site THIMO_RS05600 IPR003593 AAA+ ATPase domain THIMO_RS05600 IPR005722 ATP synthase, F1 complex, beta subunit THIMO_RS05600 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site THIMO_RS05600 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain THIMO_RS05600 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THIMO_RS05600 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal THIMO_RS05600 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05600 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily THIMO_RS05605 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily THIMO_RS05605 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal THIMO_RS05605 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal THIMO_RS05605 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain THIMO_RS05605 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit THIMO_RS05610 IPR001451 Hexapeptide repeat THIMO_RS05610 IPR038009 GlmU, C-terminal LbH domain THIMO_RS05610 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS05610 IPR025877 MobA-like NTP transferase THIMO_RS05610 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase THIMO_RS05610 IPR011004 Trimeric LpxA-like superfamily THIMO_RS05615 IPR035466 GlmS/AgaS, SIS domain 1 THIMO_RS05615 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising THIMO_RS05615 IPR029055 Nucleophile aminohydrolases, N-terminal THIMO_RS05615 IPR017932 Glutamine amidotransferase type 2 domain THIMO_RS05615 IPR001347 Sugar isomerase (SIS) THIMO_RS05615 IPR035490 GlmS/FrlB, SIS domain 2 THIMO_RS05620 IPR029062 Class I glutamine amidotransferase-like THIMO_RS05620 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain THIMO_RS05620 IPR017926 Glutamine amidotransferase THIMO_RS05625 IPR017459 Glycosyl transferase family 3, N-terminal domain THIMO_RS05625 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily THIMO_RS05625 IPR000312 Glycosyl transferase, family 3 THIMO_RS05625 IPR005940 Anthranilate phosphoribosyl transferase THIMO_RS05625 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily THIMO_RS05630 IPR001468 Indole-3-glycerol phosphate synthase, conserved site THIMO_RS05630 IPR011060 Ribulose-phosphate binding barrel THIMO_RS05630 IPR013798 Indole-3-glycerol phosphate synthase THIMO_RS05630 IPR013785 Aldolase-type TIM barrel THIMO_RS05635 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS05635 IPR018335 Transcription regulator HTH, Crp-type, conserved site THIMO_RS05635 IPR014710 RmlC-like jelly roll fold THIMO_RS05635 IPR012318 Crp-type HTH domain THIMO_RS05635 IPR000595 Cyclic nucleotide-binding domain THIMO_RS05635 IPR018488 Cyclic nucleotide-binding, conserved site THIMO_RS05635 IPR018490 Cyclic nucleotide-binding-like THIMO_RS05635 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS05645 IPR016067 S-adenosylmethionine decarboxylase, core THIMO_RS05645 IPR009165 S-adenosylmethionine decarboxylase, bacterial THIMO_RS05645 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic THIMO_RS05650 IPR011566 Ubiquinone biosynthesis protein Coq7 THIMO_RS05650 IPR009078 Ferritin-like superfamily THIMO_RS05655 IPR009051 Alpha-helical ferredoxin THIMO_RS05655 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS05655 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS05655 IPR004017 Cysteine-rich domain THIMO_RS05655 IPR012257 Glycolate oxidase, iron-sulphur subunit THIMO_RS05660 IPR036899 Ribosomal protein L13 superfamily THIMO_RS05660 IPR005822 Ribosomal protein L13 THIMO_RS05660 IPR005823 Ribosomal protein L13, bacterial-type THIMO_RS05660 IPR023563 Ribosomal protein L13, conserved site THIMO_RS05665 IPR023035 Ribosomal protein S9, bacterial/plastid THIMO_RS05665 IPR020574 Ribosomal protein S9, conserved site THIMO_RS05665 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS05665 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS05665 IPR000754 Ribosomal protein S9 THIMO_RS05675 IPR023614 Porin domain superfamily THIMO_RS05675 IPR002299 Porin, Neisseria sp. type THIMO_RS05675 IPR033900 Porin domain, Gram-negative type THIMO_RS05675 IPR001702 Porin, Gram-negative type THIMO_RS05675 IPR013793 Porin, Gram-negative type, conserved site THIMO_RS05680 IPR004788 Ribose 5-phosphate isomerase, type A THIMO_RS05680 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup THIMO_RS05680 IPR037171 NagB/RpiA transferase-like THIMO_RS05685 IPR001926 Pyridoxal-phosphate dependent enzyme THIMO_RS05685 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site THIMO_RS05685 IPR001721 Threonine dehydratase, ACT-like domain THIMO_RS05685 IPR038110 Threonine dehydratase, ACT-like domain superfamily THIMO_RS05685 IPR005787 Threonine dehydratase, biosynthetic THIMO_RS05685 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THIMO_RS05690 IPR037171 NagB/RpiA transferase-like THIMO_RS05690 IPR002698 5-formyltetrahydrofolate cyclo-ligase THIMO_RS05690 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily THIMO_RS05695 IPR007838 Cell division protein ZapA-like THIMO_RS05695 IPR036192 Cell division protein ZapA-like superfamily THIMO_RS05705 IPR036255 YgfB-like superfamily THIMO_RS05705 IPR011978 Uncharacterised protein family UPF0149 THIMO_RS05710 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal THIMO_RS05710 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site THIMO_RS05710 IPR001714 Peptidase M24, methionine aminopeptidase THIMO_RS05710 IPR000994 Peptidase M24 THIMO_RS05710 IPR036005 Creatinase/aminopeptidase-like THIMO_RS05710 IPR007865 Aminopeptidase P, N-terminal THIMO_RS05715 IPR002938 FAD-binding domain THIMO_RS05715 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS05715 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site THIMO_RS05715 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase THIMO_RS05715 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 THIMO_RS05720 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 THIMO_RS05720 IPR002938 FAD-binding domain THIMO_RS05720 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site THIMO_RS05720 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS05725 IPR035966 Phosphofructokinase superfamily THIMO_RS05725 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 THIMO_RS05725 IPR000023 Phosphofructokinase domain THIMO_RS05725 IPR022953 ATP-dependent 6-phosphofructokinase THIMO_RS05730 IPR004131 Pyrophosphate-energised proton pump THIMO_RS05735 IPR036649 Inorganic pyrophosphatase superfamily THIMO_RS05735 IPR008162 Inorganic pyrophosphatase THIMO_RS05740 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily THIMO_RS05740 IPR023045 Molybdenum cofactor biosynthesis C THIMO_RS05740 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain THIMO_RS05750 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05750 IPR030393 EngB-type guanine nucleotide-binding (G) domain THIMO_RS05750 IPR006073 GTP binding domain THIMO_RS05750 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC THIMO_RS05760 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05760 IPR002891 Adenylyl-sulfate kinase THIMO_RS05765 IPR001451 Hexapeptide repeat THIMO_RS05765 IPR018357 Hexapeptide transferase, conserved site THIMO_RS05765 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family THIMO_RS05765 IPR011004 Trimeric LpxA-like superfamily THIMO_RS05765 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily THIMO_RS05765 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 THIMO_RS05770 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS05770 IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type THIMO_RS05770 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 THIMO_RS05770 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS05770 IPR004839 Aminotransferase, class I/classII THIMO_RS05770 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS05790 IPR006218 DAHP synthetase I/KDSA THIMO_RS05790 IPR006219 DHAP synthase, class 1 THIMO_RS05790 IPR013785 Aldolase-type TIM barrel THIMO_RS05800 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal THIMO_RS05800 IPR039718 Ribonucleoside-diphosphate reductase large subunit THIMO_RS05800 IPR000788 Ribonucleotide reductase large subunit, C-terminal THIMO_RS05800 IPR005144 ATP-cone domain THIMO_RS05800 IPR013346 Ribonucleotide reductase, class I , alpha subunit THIMO_RS05800 IPR013509 Ribonucleotide reductase large subunit, N-terminal THIMO_RS05810 IPR019808 Histidine triad, conserved site THIMO_RS05810 IPR001310 Histidine triad (HIT) protein THIMO_RS05810 IPR011146 HIT-like domain THIMO_RS05810 IPR036265 HIT-like superfamily THIMO_RS05815 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain THIMO_RS05825 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS05825 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily THIMO_RS05825 IPR011803 Adenylylsulphate reductase, alpha subunit THIMO_RS05825 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain THIMO_RS05825 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily THIMO_RS05830 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS05830 IPR011802 Adenylylsulphate reductase, beta subunit THIMO_RS05830 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal THIMO_RS05830 IPR038465 APS reductase, beta subunit, C-terminal domain superfamily THIMO_RS05830 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS05845 IPR000891 Pyruvate carboxyltransferase THIMO_RS05845 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain THIMO_RS05845 IPR012425 DmpG-like communication THIMO_RS05845 IPR017629 4-hydroxy-2-oxovalerate aldolase THIMO_RS05845 IPR013785 Aldolase-type TIM barrel THIMO_RS05860 IPR015590 Aldehyde dehydrogenase domain THIMO_RS05860 IPR016162 Aldehyde dehydrogenase, N-terminal THIMO_RS05860 IPR029510 Aldehyde dehydrogenase, glutamic acid active site THIMO_RS05860 IPR016160 Aldehyde dehydrogenase, cysteine active site THIMO_RS05860 IPR016161 Aldehyde/histidinol dehydrogenase THIMO_RS05860 IPR016163 Aldehyde dehydrogenase, C-terminal THIMO_RS05865 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal THIMO_RS05865 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase THIMO_RS05865 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type THIMO_RS05865 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS05870 IPR023931 Multidrug resistance protein MdtC THIMO_RS05870 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THIMO_RS05870 IPR001036 Acriflavin resistance protein THIMO_RS05885 IPR001633 EAL domain THIMO_RS05885 IPR035919 EAL domain superfamily THIMO_RS05885 IPR000160 GGDEF domain THIMO_RS05885 IPR029787 Nucleotide cyclase THIMO_RS05885 IPR005330 MHYT domain THIMO_RS05895 IPR016161 Aldehyde/histidinol dehydrogenase THIMO_RS05895 IPR016163 Aldehyde dehydrogenase, C-terminal THIMO_RS05895 IPR016162 Aldehyde dehydrogenase, N-terminal THIMO_RS05895 IPR015590 Aldehyde dehydrogenase domain THIMO_RS05900 IPR005677 Fumarate hydratase, class II THIMO_RS05900 IPR020557 Fumarate lyase, conserved site THIMO_RS05900 IPR018951 Fumarase C, C-terminal THIMO_RS05900 IPR000362 Fumarate lyase family THIMO_RS05900 IPR024083 Fumarase/histidase, N-terminal THIMO_RS05900 IPR008948 L-Aspartase-like THIMO_RS05900 IPR022761 Fumarate lyase, N-terminal THIMO_RS05910 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS05910 IPR011006 CheY-like superfamily THIMO_RS05910 IPR037522 HD-GYP domain THIMO_RS05910 IPR003607 HD/PDEase domain THIMO_RS05925 IPR004772 TrkH potassium transport family THIMO_RS05925 IPR003445 Cation transporter THIMO_RS05930 IPR006036 Potassium uptake protein TrkA THIMO_RS05930 IPR006037 Regulator of K+ conductance, C-terminal THIMO_RS05930 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily THIMO_RS05930 IPR003148 Regulator of K+ conductance, N-terminal THIMO_RS05930 IPR036291 NAD(P)-binding domain superfamily THIMO_RS05935 IPR025944 Sigma-54 interaction domain, conserved site THIMO_RS05935 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05935 IPR003593 AAA+ ATPase domain THIMO_RS05935 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS05935 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THIMO_RS05935 IPR009057 Homeobox-like domain superfamily THIMO_RS05935 IPR011006 CheY-like superfamily THIMO_RS05935 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS05935 IPR002078 RNA polymerase sigma factor 54 interaction domain THIMO_RS05940 IPR005467 Histidine kinase domain THIMO_RS05940 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS05940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS05940 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS05940 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS05940 IPR035965 PAS domain superfamily THIMO_RS05940 IPR013767 PAS fold THIMO_RS05940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS05940 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator THIMO_RS05940 IPR003660 HAMP domain THIMO_RS05940 IPR000014 PAS domain THIMO_RS05950 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type THIMO_RS05950 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site THIMO_RS05950 IPR023267 RNA (C5-cytosine) methyltransferase THIMO_RS05950 IPR004573 rRNA small subunit methyltransferase B THIMO_RS05950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS05950 IPR006027 NusB/RsmB/TIM44 THIMO_RS05950 IPR035926 NusB-like superfamily THIMO_RS05955 IPR037022 Formyl transferase, C-terminal domain superfamily THIMO_RS05955 IPR005793 Formyl transferase, C-terminal THIMO_RS05955 IPR005794 Methionyl-tRNA formyltransferase THIMO_RS05955 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain THIMO_RS05955 IPR011034 Formyl transferase-like, C-terminal domain superfamily THIMO_RS05955 IPR001555 Phosphoribosylglycinamide formyltransferase, active site THIMO_RS05955 IPR036477 Formyl transferase, N-terminal domain superfamily THIMO_RS05955 IPR002376 Formyl transferase, N-terminal THIMO_RS05960 IPR036821 Peptide deformylase superfamily THIMO_RS05960 IPR023635 Peptide deformylase THIMO_RS05970 IPR041614 DprA, winged helix domain THIMO_RS05970 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS05970 IPR003488 DNA recombination-mediator protein A THIMO_RS05975 IPR007456 Smg THIMO_RS05985 IPR037294 ABC transporter, BtuC-like THIMO_RS05985 IPR001626 ABC transporter, TroCD-like THIMO_RS05990 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS05990 IPR037294 ABC transporter, BtuC-like THIMO_RS05990 IPR001626 ABC transporter, TroCD-like THIMO_RS05990 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS05995 IPR017871 ABC transporter, conserved site THIMO_RS05995 IPR003439 ABC transporter-like THIMO_RS05995 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS05995 IPR003593 AAA+ ATPase domain THIMO_RS06000 IPR006127 Periplasmic solute binding protein, ZnuA-like THIMO_RS06000 IPR006128 Adhesion lipoprotein THIMO_RS06000 IPR006129 Adhesin B THIMO_RS06005 IPR025589 Topoisomerase C-terminal repeat THIMO_RS06005 IPR000380 DNA topoisomerase, type IA THIMO_RS06005 IPR003601 DNA topoisomerase, type IA, domain 2 THIMO_RS06005 IPR023406 DNA topoisomerase, type IA, active site THIMO_RS06005 IPR013497 DNA topoisomerase, type IA, central THIMO_RS06005 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 THIMO_RS06005 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 THIMO_RS06005 IPR034149 DNA topoisomerase 1, TOPRIM domain THIMO_RS06005 IPR023405 DNA topoisomerase, type IA, core domain THIMO_RS06005 IPR028612 DNA topoisomerase I, type IA THIMO_RS06005 IPR005733 DNA topoisomerase I, bacterial-type THIMO_RS06005 IPR003602 DNA topoisomerase, type IA, DNA-binding domain THIMO_RS06005 IPR006171 TOPRIM domain THIMO_RS06005 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 THIMO_RS06010 IPR023535 Threonylcarbamoyl-AMP synthase THIMO_RS06010 IPR006070 YrdC-like domain THIMO_RS06010 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily THIMO_RS06020 IPR029052 Metallo-dependent phosphatase-like THIMO_RS06020 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type THIMO_RS06025 IPR020621 ATP phosphoribosyltransferase HisG, long form THIMO_RS06025 IPR013820 ATP phosphoribosyltransferase, catalytic domain THIMO_RS06025 IPR013115 Histidine biosynthesis HisG, C-terminal THIMO_RS06025 IPR011322 Nitrogen regulatory PII-like, alpha/beta THIMO_RS06025 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal THIMO_RS06025 IPR001348 ATP phosphoribosyltransferase HisG THIMO_RS06035 IPR000189 Prokaryotic transglycosylase, active site THIMO_RS06035 IPR023346 Lysozyme-like domain superfamily THIMO_RS06035 IPR008258 Transglycosylase SLT domain 1 THIMO_RS06040 IPR021135 Phosphoenolpyruvate carboxylase THIMO_RS06040 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site THIMO_RS06040 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type THIMO_RS06040 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THIMO_RS06045 IPR004772 TrkH potassium transport family THIMO_RS06045 IPR003445 Cation transporter THIMO_RS06050 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THIMO_RS06050 IPR005346 RnfH protein THIMO_RS06050 IPR037021 RnfH superfamily THIMO_RS06055 IPR003667 NqrDE/RnfAE THIMO_RS06055 IPR010968 Ion-translocating oxidoreductase complex subunit E THIMO_RS06060 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG THIMO_RS06060 IPR007329 FMN-binding THIMO_RS06065 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D THIMO_RS06065 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD THIMO_RS06070 IPR026902 RnfC Barrel sandwich hybrid domain THIMO_RS06070 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily THIMO_RS06070 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC THIMO_RS06070 IPR009051 Alpha-helical ferredoxin THIMO_RS06070 IPR019554 Soluble ligand binding domain THIMO_RS06070 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS06070 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS06070 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain THIMO_RS06075 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB THIMO_RS06075 IPR011005 Dihydropteroate synthase-like THIMO_RS06075 IPR007202 4Fe-4S domain THIMO_RS06075 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS06075 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS06075 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria THIMO_RS06080 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA THIMO_RS06080 IPR003667 NqrDE/RnfAE THIMO_RS06085 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS06085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS06085 IPR005467 Histidine kinase domain THIMO_RS06085 IPR000014 PAS domain THIMO_RS06085 IPR001610 PAC motif THIMO_RS06085 IPR000700 PAS-associated, C-terminal THIMO_RS06085 IPR013767 PAS fold THIMO_RS06085 IPR014285 Nitrogen fixation negative regulator NifL THIMO_RS06085 IPR035965 PAS domain superfamily THIMO_RS06085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS06090 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS06090 IPR003018 GAF domain THIMO_RS06090 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THIMO_RS06090 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THIMO_RS06090 IPR029016 GAF-like domain superfamily THIMO_RS06090 IPR025944 Sigma-54 interaction domain, conserved site THIMO_RS06090 IPR002078 RNA polymerase sigma factor 54 interaction domain THIMO_RS06090 IPR010113 Nif-specific regulatory protein THIMO_RS06090 IPR003593 AAA+ ATPase domain THIMO_RS06090 IPR009057 Homeobox-like domain superfamily THIMO_RS06090 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS06095 IPR021127 CRISPR-associated endonuclease Cas2 THIMO_RS06095 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 THIMO_RS06100 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain THIMO_RS06100 IPR002729 CRISPR-associated protein Cas1 THIMO_RS06100 IPR011604 Exonuclease, phage-type/RecB, C-terminal THIMO_RS06100 IPR013343 CRISPR-associated protein Cas4 THIMO_RS06100 IPR022765 Dna2/Cas4, domain of unknown function DUF83 THIMO_RS06100 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain THIMO_RS06140 IPR041705 VapC-like Sll0205 protein, PIN domain THIMO_RS06140 IPR022907 VapC family THIMO_RS06175 IPR005251 Methylthioribose-1-phosphate isomerase THIMO_RS06175 IPR000649 Initiation factor 2B-related THIMO_RS06175 IPR011559 Initiation factor 2B alpha/beta/delta THIMO_RS06175 IPR037171 NagB/RpiA transferase-like THIMO_RS06180 IPR006680 Amidohydrolase-related THIMO_RS06180 IPR011059 Metal-dependent hydrolase, composite domain superfamily THIMO_RS06180 IPR032466 Metal-dependent hydrolase THIMO_RS06180 IPR023512 Deaminase MtaD/DadD THIMO_RS06190 IPR001667 DDH domain THIMO_RS06190 IPR038763 DHH phosphoesterase superfamily THIMO_RS06190 IPR003156 DHHA1 domain THIMO_RS06190 IPR002646 Poly A polymerase, head domain THIMO_RS06190 IPR000644 CBS domain THIMO_RS06190 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain THIMO_RS06195 IPR019899 Sodium/solute symporter, VC2705 subfamily THIMO_RS06195 IPR001734 Sodium/solute symporter THIMO_RS06195 IPR038377 Sodium/glucose symporter superfamily THIMO_RS06205 IPR001926 Pyridoxal-phosphate dependent enzyme THIMO_RS06205 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THIMO_RS06205 IPR004450 Threonine synthase-like THIMO_RS06205 IPR037158 Threonine synthase, N-terminal domain superfamily THIMO_RS06205 IPR029144 Threonine synthase, N-terminal THIMO_RS06205 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site THIMO_RS06210 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain THIMO_RS06210 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site THIMO_RS06210 IPR013785 Aldolase-type TIM barrel THIMO_RS06210 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily THIMO_RS06210 IPR000891 Pyruvate carboxyltransferase THIMO_RS06220 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta THIMO_RS06220 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal THIMO_RS06220 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal THIMO_RS06220 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily THIMO_RS06220 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat THIMO_RS06220 IPR005743 DNA gyrase, subunit A THIMO_RS06220 IPR013760 DNA topoisomerase, type IIA-like domain superfamily THIMO_RS06225 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS06225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS06225 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THIMO_RS06225 IPR022278 Phosphoserine aminotransferase THIMO_RS06225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS06225 IPR000192 Aminotransferase class V domain THIMO_RS06230 IPR002912 ACT domain THIMO_RS06230 IPR029009 Allosteric substrate binding domain superfamily THIMO_RS06230 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain THIMO_RS06230 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site THIMO_RS06230 IPR006236 D-3-phosphoglycerate dehydrogenase THIMO_RS06230 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THIMO_RS06230 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 THIMO_RS06230 IPR036291 NAD(P)-binding domain superfamily THIMO_RS06235 IPR018528 Prephenate dehydratase, conserved site THIMO_RS06235 IPR002912 ACT domain THIMO_RS06235 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase THIMO_RS06235 IPR001086 Prephenate dehydratase THIMO_RS06235 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain THIMO_RS06235 IPR036263 Chorismate mutase type II superfamily THIMO_RS06235 IPR002701 Chorismate mutase II, prokaryotic-type THIMO_RS06235 IPR036979 Chorismate mutase domain superfamily THIMO_RS06240 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS06240 IPR005861 Histidinol-phosphate aminotransferase family THIMO_RS06240 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS06240 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site THIMO_RS06240 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS06240 IPR004839 Aminotransferase, class I/classII THIMO_RS06245 IPR003099 Prephenate dehydrogenase THIMO_RS06245 IPR036291 NAD(P)-binding domain superfamily THIMO_RS06245 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THIMO_RS06250 IPR004680 Citrate transporter-like domain THIMO_RS06265 IPR011010 DNA breaking-rejoining enzyme, catalytic core THIMO_RS06265 IPR013762 Integrase-like, catalytic domain superfamily THIMO_RS06265 IPR023009 Tyrosine recombinase XerC/XerD THIMO_RS06265 IPR011932 Tyrosine recombinase XerD THIMO_RS06265 IPR010998 Integrase/recombinase, N-terminal THIMO_RS06265 IPR002104 Integrase, catalytic domain THIMO_RS06265 IPR004107 Integrase, SAM-like, N-terminal THIMO_RS06270 IPR004680 Citrate transporter-like domain THIMO_RS06270 IPR031312 Sodium/sulphate symporter, conserved site THIMO_RS06270 IPR006037 Regulator of K+ conductance, C-terminal THIMO_RS06270 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily THIMO_RS06285 IPR008949 Isoprenoid synthase domain superfamily THIMO_RS06285 IPR000092 Polyprenyl synthetase THIMO_RS06285 IPR033749 Polyprenyl synthetase, conserved site THIMO_RS06290 IPR018258 Ribosomal protein L21, conserved site THIMO_RS06290 IPR036164 L21-like superfamily THIMO_RS06290 IPR028909 Ribosomal protein L21-like THIMO_RS06290 IPR001787 Ribosomal protein L21 THIMO_RS06295 IPR018261 Ribosomal protein L27, conserved site THIMO_RS06295 IPR001684 Ribosomal protein L27 THIMO_RS06300 IPR036726 GTP1/OBG domain superfamily THIMO_RS06300 IPR014100 GTP-binding protein Obg/CgtA THIMO_RS06300 IPR031167 OBG-type guanine nucleotide-binding (G) domain THIMO_RS06300 IPR035101 GTP-binding protein, Obg-type THIMO_RS06300 IPR006169 GTP1/OBG domain THIMO_RS06300 IPR006073 GTP binding domain THIMO_RS06300 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS06300 IPR006074 GTP1/OBG, conserved site THIMO_RS06305 IPR011529 Glutamate 5-kinase THIMO_RS06305 IPR036393 Acetylglutamate kinase-like superfamily THIMO_RS06305 IPR019797 Glutamate 5-kinase, conserved site THIMO_RS06305 IPR002478 PUA domain THIMO_RS06305 IPR015947 PUA-like superfamily THIMO_RS06305 IPR001048 Aspartate/glutamate/uridylate kinase THIMO_RS06305 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase THIMO_RS06305 IPR041739 Glutamate-5-kinase domain THIMO_RS06305 IPR036974 PUA domain superfamily THIMO_RS06305 IPR001057 Glutamate/acetylglutamate kinase THIMO_RS06310 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain THIMO_RS06310 IPR013520 Exonuclease, RNase T/DNA polymerase III THIMO_RS06310 IPR012337 Ribonuclease H-like superfamily THIMO_RS06310 IPR036397 Ribonuclease H superfamily THIMO_RS06310 IPR006309 DNA polymerase 3, epsilon subunit THIMO_RS06315 IPR018335 Transcription regulator HTH, Crp-type, conserved site THIMO_RS06315 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS06315 IPR018490 Cyclic nucleotide-binding-like THIMO_RS06315 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS06315 IPR012318 Crp-type HTH domain THIMO_RS06315 IPR014710 RmlC-like jelly roll fold THIMO_RS06315 IPR000595 Cyclic nucleotide-binding domain THIMO_RS06325 IPR017926 Glutamine amidotransferase THIMO_RS06325 IPR033828 CTP synthase GATase domain THIMO_RS06325 IPR029062 Class I glutamine amidotransferase-like THIMO_RS06325 IPR004468 CTP synthase THIMO_RS06325 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS06325 IPR017456 CTP synthase, N-terminal THIMO_RS06330 IPR006269 3-deoxy-8-phosphooctulonate synthase THIMO_RS06330 IPR013785 Aldolase-type TIM barrel THIMO_RS06330 IPR006218 DAHP synthetase I/KDSA THIMO_RS06335 IPR020811 Enolase, N-terminal THIMO_RS06335 IPR020810 Enolase, C-terminal TIM barrel domain THIMO_RS06335 IPR029017 Enolase-like, N-terminal THIMO_RS06335 IPR000941 Enolase THIMO_RS06335 IPR020809 Enolase, conserved site THIMO_RS06335 IPR036849 Enolase-like, C-terminal domain superfamily THIMO_RS06340 IPR007060 Septum formation initiator FtsL/DivIC THIMO_RS06340 IPR023081 Cell division protein FtsB THIMO_RS06345 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site THIMO_RS06345 IPR034683 Cytidylyltransferase IspD/TarI THIMO_RS06345 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS06345 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase THIMO_RS06350 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily THIMO_RS06350 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site THIMO_RS06350 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase THIMO_RS06355 IPR011760 Pseudouridine synthase, TruD, insertion domain THIMO_RS06355 IPR020103 Pseudouridine synthase, catalytic domain superfamily THIMO_RS06355 IPR001656 Pseudouridine synthase, TruD THIMO_RS06355 IPR020119 Pseudouridine synthase TruD, conserved site THIMO_RS06355 IPR042214 Pseudouridine synthase, TruD, catalytic domain THIMO_RS06365 IPR036523 SurE-like phosphatase/nucleotidase superfamily THIMO_RS06365 IPR002828 Survival protein SurE-like phosphatase/nucleotidase THIMO_RS06365 IPR030048 Survival protein SurE THIMO_RS06370 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase THIMO_RS06370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS06375 IPR032816 SNARE associated Golgi protein THIMO_RS06380 IPR018392 LysM domain THIMO_RS06380 IPR011055 Duplicated hybrid motif THIMO_RS06380 IPR036779 LysM domain superfamily THIMO_RS06380 IPR016047 Peptidase M23 THIMO_RS06385 IPR000943 RNA polymerase sigma-70 THIMO_RS06385 IPR014284 RNA polymerase sigma-70 like domain THIMO_RS06385 IPR007624 RNA polymerase sigma-70 region 3 THIMO_RS06385 IPR007627 RNA polymerase sigma-70 region 2 THIMO_RS06385 IPR007630 RNA polymerase sigma-70 region 4 THIMO_RS06385 IPR009042 RNA polymerase sigma-70 region 1.2 THIMO_RS06385 IPR013325 RNA polymerase sigma factor, region 2 THIMO_RS06385 IPR013324 RNA polymerase sigma factor, region 3/4-like THIMO_RS06385 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS06385 IPR012761 RNA polymerase sigma factor RpoS THIMO_RS06405 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site THIMO_RS06405 IPR004677 Cytochrome c oxidase cbb3-type, subunit I THIMO_RS06405 IPR036927 Cytochrome c oxidase-like, subunit I superfamily THIMO_RS06405 IPR023616 Cytochrome c oxidase-like, subunit I domain THIMO_RS06405 IPR000883 Cytochrome c oxidase subunit I THIMO_RS06420 IPR004678 Cytochrome c oxidase cbb3-type, subunit III THIMO_RS06420 IPR009056 Cytochrome c-like domain THIMO_RS06420 IPR008168 Cytochrome c, class IC THIMO_RS06420 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily THIMO_RS06420 IPR036909 Cytochrome c-like domain superfamily THIMO_RS06420 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal THIMO_RS06425 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS06425 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS06425 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG THIMO_RS06425 IPR032879 FixG, C-terminal immunoglobulin-like domain THIMO_RS06425 IPR013783 Immunoglobulin-like fold THIMO_RS06435 IPR006121 Heavy metal-associated domain, HMA THIMO_RS06435 IPR008250 P-type ATPase, A domain superfamily THIMO_RS06435 IPR006122 Heavy metal-associated domain, copper ion-binding THIMO_RS06435 IPR023214 HAD superfamily THIMO_RS06435 IPR017969 Heavy-metal-associated, conserved site THIMO_RS06435 IPR023299 P-type ATPase, cytoplasmic domain N THIMO_RS06435 IPR036163 Heavy metal-associated domain superfamily THIMO_RS06435 IPR027256 P-type ATPase, subfamily IB THIMO_RS06435 IPR023298 P-type ATPase, transmembrane domain superfamily THIMO_RS06435 IPR036412 HAD-like superfamily THIMO_RS06435 IPR018303 P-type ATPase, phosphorylation site THIMO_RS06435 IPR001757 P-type ATPase THIMO_RS06445 IPR003698 Lipoyl synthase THIMO_RS06445 IPR007197 Radical SAM THIMO_RS06445 IPR013785 Aldolase-type TIM barrel THIMO_RS06445 IPR006638 Elp3/MiaB/NifB THIMO_RS06450 IPR004619 Type III pantothenate kinase THIMO_RS06455 IPR012820 Sucrose synthase, plant/cyanobacteria THIMO_RS06455 IPR001296 Glycosyl transferase, family 1 THIMO_RS06455 IPR000368 Sucrose synthase THIMO_RS06460 IPR036610 PEBP-like superfamily THIMO_RS06460 IPR008914 Phosphatidylethanolamine-binding protein THIMO_RS06460 IPR005247 YbhB/YbcL THIMO_RS06465 IPR011990 Tetratricopeptide-like helical domain superfamily THIMO_RS06465 IPR013026 Tetratricopeptide repeat-containing domain THIMO_RS06465 IPR017560 Cytochrome c-type biogenesis protein CcmI THIMO_RS06465 IPR019734 Tetratricopeptide repeat THIMO_RS06470 IPR017560 Cytochrome c-type biogenesis protein CcmI THIMO_RS06470 IPR019734 Tetratricopeptide repeat THIMO_RS06470 IPR011990 Tetratricopeptide-like helical domain superfamily THIMO_RS06470 IPR013026 Tetratricopeptide repeat-containing domain THIMO_RS06470 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily THIMO_RS06470 IPR005616 CcmH/CycL/Ccl2/NrfF family THIMO_RS06475 IPR013740 Redoxin THIMO_RS06475 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE THIMO_RS06475 IPR013766 Thioredoxin domain THIMO_RS06475 IPR017937 Thioredoxin, conserved site THIMO_RS06475 IPR036249 Thioredoxin-like superfamily THIMO_RS06480 IPR003568 Cytochrome c-type biogenesis protein CcmF THIMO_RS06480 IPR002541 Cytochrome c assembly protein THIMO_RS06480 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal THIMO_RS06480 IPR003567 Cytochrome c-type biogenesis protein THIMO_RS06485 IPR036127 CcmE-like superfamily THIMO_RS06485 IPR004329 CcmE/CycJ protein THIMO_RS06495 IPR002541 Cytochrome c assembly protein THIMO_RS06495 IPR003557 Cytochrome c-type biogenesis protein CcmC THIMO_RS06500 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria THIMO_RS06500 IPR003544 Cytochrome c-type biogenesis protein CcmB THIMO_RS06505 IPR005895 ABC transporter, haem export, CcmA THIMO_RS06505 IPR003439 ABC transporter-like THIMO_RS06505 IPR003593 AAA+ ATPase domain THIMO_RS06505 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS06505 IPR017871 ABC transporter, conserved site THIMO_RS06510 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily THIMO_RS06510 IPR000860 Porphobilinogen deaminase THIMO_RS06510 IPR022417 Porphobilinogen deaminase, N-terminal THIMO_RS06510 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site THIMO_RS06510 IPR022418 Porphobilinogen deaminase, C-terminal THIMO_RS06515 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase THIMO_RS06515 IPR039793 Uroporphyrinogen-III synthase THIMO_RS06515 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily THIMO_RS06540 IPR023677 UbiD decarboxylyase, bacteria THIMO_RS06540 IPR002830 UbiD decarboxylyase family THIMO_RS06545 IPR001567 Peptidase M3A/M3B catalytic domain THIMO_RS06545 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 THIMO_RS06555 IPR001451 Hexapeptide repeat THIMO_RS06555 IPR011004 Trimeric LpxA-like superfamily THIMO_RS06560 IPR003399 Mce/MlaD THIMO_RS06565 IPR007498 Intermembrane transport protein PqiA-like THIMO_RS06565 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type THIMO_RS06570 IPR011057 Mss4-like superfamily THIMO_RS06570 IPR002579 Peptide methionine sulphoxide reductase MrsB THIMO_RS06570 IPR028427 Peptide methionine sulfoxide reductase THIMO_RS06580 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily THIMO_RS06580 IPR001533 Pterin 4 alpha carbinolamine dehydratase THIMO_RS06600 IPR029035 DHS-like NAD/FAD-binding domain superfamily THIMO_RS06600 IPR003000 Sirtuin family THIMO_RS06600 IPR026591 Sirtuin, catalytic core small domain superfamily THIMO_RS06600 IPR027546 Sirtuin, class III THIMO_RS06600 IPR026590 Sirtuin family, catalytic core domain THIMO_RS06630 IPR010089 Flavoprotein WrbA-like THIMO_RS06630 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic THIMO_RS06630 IPR008254 Flavodoxin/nitric oxide synthase THIMO_RS06630 IPR029039 Flavoprotein-like superfamily THIMO_RS06630 IPR005025 NADPH-dependent FMN reductase-like THIMO_RS06645 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS06645 IPR001867 OmpR/PhoB-type DNA-binding domain THIMO_RS06645 IPR011006 CheY-like superfamily THIMO_RS06645 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS06645 IPR039420 Transcriptional regulatory protein WalR-like THIMO_RS06650 IPR016132 Phytochrome chromophore attachment domain THIMO_RS06650 IPR013654 PAS fold-2 THIMO_RS06650 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS06650 IPR001294 Phytochrome THIMO_RS06650 IPR013515 Phytochrome, central region THIMO_RS06650 IPR003018 GAF domain THIMO_RS06650 IPR035965 PAS domain superfamily THIMO_RS06650 IPR029016 GAF-like domain superfamily THIMO_RS06650 IPR000014 PAS domain THIMO_RS06650 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS06650 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS06650 IPR005467 Histidine kinase domain THIMO_RS06650 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS06655 IPR016195 Polymerase/histidinol phosphatase-like THIMO_RS06655 IPR037160 DNA polymerase, thumb domain superfamily THIMO_RS06655 IPR004013 PHP domain THIMO_RS06655 IPR022311 Uncharacterised conserved protein UCP005047, YshC THIMO_RS06655 IPR029398 DNA polymerase beta, thumb domain THIMO_RS06655 IPR003141 Polymerase/histidinol phosphatase, N-terminal THIMO_RS06655 IPR027421 DNA polymerase lambda lyase domain superfamily THIMO_RS06655 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 THIMO_RS06655 IPR002054 DNA-directed DNA polymerase X THIMO_RS06655 IPR010996 DNA polymerase beta-like, N-terminal domain THIMO_RS06660 IPR005952 Phosphoglycerate mutase 1 THIMO_RS06660 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site THIMO_RS06660 IPR029033 Histidine phosphatase superfamily THIMO_RS06660 IPR013078 Histidine phosphatase superfamily, clade-1 THIMO_RS06690 IPR025105 Domain of unknown function DUF4010 THIMO_RS06705 IPR028261 Dihydroprymidine dehydrogenase domain II THIMO_RS06705 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS06705 IPR023753 FAD/NAD(P)-binding domain THIMO_RS06705 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 THIMO_RS06705 IPR009051 Alpha-helical ferredoxin THIMO_RS06715 IPR003593 AAA+ ATPase domain THIMO_RS06715 IPR011006 CheY-like superfamily THIMO_RS06715 IPR009057 Homeobox-like domain superfamily THIMO_RS06715 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS06715 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS06715 IPR002078 RNA polymerase sigma factor 54 interaction domain THIMO_RS06715 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THIMO_RS06715 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THIMO_RS06715 IPR025944 Sigma-54 interaction domain, conserved site THIMO_RS06715 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS06735 IPR013785 Aldolase-type TIM barrel THIMO_RS06735 IPR033888 Dihydroorotate dehydrogenase, class 1B THIMO_RS06735 IPR005720 Dihydroorotate dehydrogenase domain THIMO_RS06735 IPR024920 Dihydroorotate dehydrogenase, class 1 THIMO_RS06735 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 THIMO_RS06735 IPR001295 Dihydroorotate dehydrogenase, conserved site THIMO_RS06740 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THIMO_RS06740 IPR029061 Thiamin diphosphate-binding fold THIMO_RS06740 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding THIMO_RS06740 IPR011895 Pyruvate-flavodoxin oxidoreductase THIMO_RS06740 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal THIMO_RS06740 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain THIMO_RS06740 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain THIMO_RS06740 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily THIMO_RS06740 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II THIMO_RS06740 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS06740 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS06740 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain THIMO_RS06745 IPR002129 Pyridoxal phosphate-dependent decarboxylase THIMO_RS06745 IPR010107 Glutamate decarboxylase THIMO_RS06745 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS06745 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS06755 IPR025154 Putative metallopeptidase domain THIMO_RS06755 IPR018698 VWA-like domain THIMO_RS06785 IPR011990 Tetratricopeptide-like helical domain superfamily THIMO_RS06785 IPR001915 Peptidase M48 THIMO_RS06785 IPR030873 Beta-barrel assembly-enhancing protease THIMO_RS06785 IPR013026 Tetratricopeptide repeat-containing domain THIMO_RS06785 IPR019734 Tetratricopeptide repeat THIMO_RS06790 IPR001296 Glycosyl transferase, family 1 THIMO_RS06790 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THIMO_RS06795 IPR001296 Glycosyl transferase, family 1 THIMO_RS06800 IPR001296 Glycosyl transferase, family 1 THIMO_RS06800 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THIMO_RS06855 IPR003593 AAA+ ATPase domain THIMO_RS06855 IPR003838 ABC transporter permease protein domain THIMO_RS06855 IPR003439 ABC transporter-like THIMO_RS06855 IPR017871 ABC transporter, conserved site THIMO_RS06855 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS06855 IPR017911 ABC transporter, macrolide export, ATP-binding domain THIMO_RS06855 IPR025857 MacB-like periplasmic core domain THIMO_RS06860 IPR003838 ABC transporter permease protein domain THIMO_RS06860 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS06860 IPR025857 MacB-like periplasmic core domain THIMO_RS06860 IPR017911 ABC transporter, macrolide export, ATP-binding domain THIMO_RS06860 IPR017871 ABC transporter, conserved site THIMO_RS06860 IPR003439 ABC transporter-like THIMO_RS06860 IPR003593 AAA+ ATPase domain THIMO_RS06865 IPR017871 ABC transporter, conserved site THIMO_RS06865 IPR003439 ABC transporter-like THIMO_RS06865 IPR003593 AAA+ ATPase domain THIMO_RS06865 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS06875 IPR036736 ACP-like superfamily THIMO_RS06875 IPR016039 Thiolase-like THIMO_RS06875 IPR006162 Phosphopantetheine attachment site THIMO_RS06875 IPR009081 Phosphopantetheine binding ACP domain THIMO_RS06875 IPR020806 Polyketide synthase, phosphopantetheine-binding domain THIMO_RS06875 IPR013968 Polyketide synthase, ketoreductase domain THIMO_RS06875 IPR042104 Polyketide synthase, dehydratase domain superfamily THIMO_RS06875 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THIMO_RS06875 IPR020807 Polyketide synthase, dehydratase domain THIMO_RS06875 IPR036291 NAD(P)-binding domain superfamily THIMO_RS06875 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding THIMO_RS06875 IPR014030 Beta-ketoacyl synthase, N-terminal THIMO_RS06875 IPR014031 Beta-ketoacyl synthase, C-terminal THIMO_RS06875 IPR018201 Beta-ketoacyl synthase, active site THIMO_RS06875 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THIMO_RS06875 IPR032821 Ketoacyl-synthetase, C-terminal extension THIMO_RS06875 IPR014043 Acyl transferase THIMO_RS06880 IPR036736 ACP-like superfamily THIMO_RS06880 IPR001227 Acyl transferase domain superfamily THIMO_RS06880 IPR016039 Thiolase-like THIMO_RS06880 IPR009081 Phosphopantetheine binding ACP domain THIMO_RS06880 IPR036291 NAD(P)-binding domain superfamily THIMO_RS06880 IPR032821 Ketoacyl-synthetase, C-terminal extension THIMO_RS06880 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THIMO_RS06880 IPR014031 Beta-ketoacyl synthase, C-terminal THIMO_RS06880 IPR018201 Beta-ketoacyl synthase, active site THIMO_RS06880 IPR011032 GroES-like superfamily THIMO_RS06880 IPR013154 Alcohol dehydrogenase, N-terminal THIMO_RS06880 IPR013149 Alcohol dehydrogenase, C-terminal THIMO_RS06880 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THIMO_RS06880 IPR014043 Acyl transferase THIMO_RS06880 IPR020807 Polyketide synthase, dehydratase domain THIMO_RS06880 IPR042104 Polyketide synthase, dehydratase domain superfamily THIMO_RS06880 IPR020843 Polyketide synthase, enoylreductase domain THIMO_RS06880 IPR013968 Polyketide synthase, ketoreductase domain THIMO_RS06880 IPR020806 Polyketide synthase, phosphopantetheine-binding domain THIMO_RS06880 IPR006162 Phosphopantetheine attachment site THIMO_RS06880 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding THIMO_RS06880 IPR014030 Beta-ketoacyl synthase, N-terminal THIMO_RS06885 IPR036736 ACP-like superfamily THIMO_RS06885 IPR003231 Acyl carrier protein (ACP) THIMO_RS06885 IPR009081 Phosphopantetheine binding ACP domain THIMO_RS06900 IPR000639 Epoxide hydrolase-like THIMO_RS06900 IPR029058 Alpha/Beta hydrolase fold THIMO_RS06900 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS06905 IPR019913 Pyrimidine utilisation protein RutD THIMO_RS06905 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS06905 IPR029058 Alpha/Beta hydrolase fold THIMO_RS06915 IPR037066 TonB-dependent receptor, plug domain superfamily THIMO_RS06915 IPR000531 TonB-dependent receptor-like, beta-barrel THIMO_RS06915 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily THIMO_RS06915 IPR010101 TonB-dependent vitamin B12 transporter BtuB THIMO_RS06915 IPR012910 TonB-dependent receptor, plug domain THIMO_RS06915 IPR039426 Vitamin B12 transporter BtuB-like THIMO_RS06935 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THIMO_RS06935 IPR001296 Glycosyl transferase, family 1 THIMO_RS06945 IPR006158 Cobalamin (vitamin B12)-binding domain THIMO_RS06945 IPR007197 Radical SAM THIMO_RS06945 IPR023404 Radical SAM, alpha/beta horseshoe THIMO_RS06945 IPR034530 Hopanoid C2-methyltransferase, HpnP-like THIMO_RS06945 IPR025274 Domain of unknown function DUF4070 THIMO_RS06945 IPR006638 Elp3/MiaB/NifB THIMO_RS06955 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS06955 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS06955 IPR000847 Transcription regulator HTH, LysR THIMO_RS06955 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain THIMO_RS06955 IPR005119 LysR, substrate-binding THIMO_RS06960 IPR006276 Cobalamin-independent methionine synthase THIMO_RS06960 IPR038071 UROD/MetE-like superfamily THIMO_RS06960 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal THIMO_RS06960 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal THIMO_RS06965 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily THIMO_RS06965 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK THIMO_RS06970 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily THIMO_RS06970 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase THIMO_RS06975 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THIMO_RS06975 IPR001296 Glycosyl transferase, family 1 THIMO_RS06990 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like THIMO_RS06990 IPR036412 HAD-like superfamily THIMO_RS06990 IPR023214 HAD superfamily THIMO_RS06995 IPR015797 NUDIX hydrolase-like domain superfamily THIMO_RS06995 IPR022927 RNA pyrophosphohydrolase RppH THIMO_RS06995 IPR020084 NUDIX hydrolase, conserved site THIMO_RS06995 IPR000086 NUDIX hydrolase domain THIMO_RS07000 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THIMO_RS07000 IPR036637 Phosphohistidine domain superfamily THIMO_RS07000 IPR040442 Pyruvate kinase-like domain superfamily THIMO_RS07000 IPR036618 PtsI, HPr-binding domain superfamily THIMO_RS07000 IPR003018 GAF domain THIMO_RS07000 IPR008731 Phosphotransferase system, enzyme I N-terminal THIMO_RS07000 IPR006318 Phosphotransferase system, enzyme I-like THIMO_RS07000 IPR029016 GAF-like domain superfamily THIMO_RS07000 IPR008279 PEP-utilising enzyme, mobile domain THIMO_RS07000 IPR018274 PEP-utilising enzyme, active site THIMO_RS07000 IPR000121 PEP-utilising enzyme, C-terminal THIMO_RS07000 IPR023151 PEP-utilising enzyme, conserved site THIMO_RS07005 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 THIMO_RS07005 IPR006094 FAD linked oxidase, N-terminal THIMO_RS07005 IPR004113 FAD-linked oxidase, C-terminal THIMO_RS07005 IPR004490 Glycolate oxidase subunit GlcD THIMO_RS07005 IPR016166 FAD-binding domain, PCMH-type THIMO_RS07005 IPR036318 FAD-binding, type PCMH-like superfamily THIMO_RS07005 IPR016164 FAD-linked oxidase-like, C-terminal THIMO_RS07015 IPR011335 Restriction endonuclease type II-like THIMO_RS07015 IPR011856 tRNA endonuclease-like domain superfamily THIMO_RS07015 IPR003509 Uncharacterised protein family UPF0102 THIMO_RS07020 IPR000878 Tetrapyrrole methylase THIMO_RS07020 IPR035996 Tetrapyrrole methylase superfamily THIMO_RS07020 IPR014776 Tetrapyrrole methylase, subdomain 2 THIMO_RS07020 IPR008189 rRNA small subunit methyltransferase I THIMO_RS07020 IPR018063 SAM-dependent methyltransferase RsmI, conserved site THIMO_RS07020 IPR014777 Tetrapyrrole methylase, subdomain 1 THIMO_RS07025 IPR013539 Adenylosuccinate lyase PurB, C-terminal THIMO_RS07025 IPR004769 Adenylosuccinate lyase THIMO_RS07025 IPR008948 L-Aspartase-like THIMO_RS07025 IPR022761 Fumarate lyase, N-terminal THIMO_RS07025 IPR000362 Fumarate lyase family THIMO_RS07025 IPR024083 Fumarase/histidase, N-terminal THIMO_RS07025 IPR020557 Fumarate lyase, conserved site THIMO_RS07030 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain THIMO_RS07030 IPR036008 Aconitase, iron-sulfur domain THIMO_RS07030 IPR018136 Aconitase family, 4Fe-4S cluster binding site THIMO_RS07030 IPR006249 Aconitase/Iron-responsive element-binding protein 2 THIMO_RS07030 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel THIMO_RS07030 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain THIMO_RS07035 IPR001463 Sodium:alanine symporter THIMO_RS07040 IPR036065 BolA-like superfamily THIMO_RS07040 IPR002634 BolA protein THIMO_RS07075 IPR023546 Methylated-DNA--protein-cysteine methyltransferase THIMO_RS07075 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain THIMO_RS07075 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain THIMO_RS07075 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site THIMO_RS07075 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS07075 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding THIMO_RS07075 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily THIMO_RS07080 IPR011010 DNA breaking-rejoining enzyme, catalytic core THIMO_RS07080 IPR013762 Integrase-like, catalytic domain superfamily THIMO_RS07080 IPR002104 Integrase, catalytic domain THIMO_RS07080 IPR010998 Integrase/recombinase, N-terminal THIMO_RS07080 IPR004107 Integrase, SAM-like, N-terminal THIMO_RS07080 IPR011932 Tyrosine recombinase XerD THIMO_RS07080 IPR023009 Tyrosine recombinase XerC/XerD THIMO_RS07085 IPR036183 YajQ-like superfamily THIMO_RS07085 IPR035570 UPF0234, N-terminal THIMO_RS07085 IPR035571 UPF0234-like, C-terminal THIMO_RS07085 IPR007551 Protein of unknown function DUF520 THIMO_RS07090 IPR017937 Thioredoxin, conserved site THIMO_RS07090 IPR012336 Thioredoxin-like fold THIMO_RS07090 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal THIMO_RS07090 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily THIMO_RS07090 IPR033954 Disulphide bond isomerase, DsbC/G THIMO_RS07090 IPR036249 Thioredoxin-like superfamily THIMO_RS07095 IPR001932 PPM-type phosphatase domain THIMO_RS07095 IPR015655 Protein phosphatase 2C family THIMO_RS07095 IPR036457 PPM-type phosphatase domain superfamily THIMO_RS07100 IPR011335 Restriction endonuclease type II-like THIMO_RS07100 IPR008538 Domain of unknown function DUF820 THIMO_RS07115 IPR002699 ATPase, V1 complex, subunit D THIMO_RS07120 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site THIMO_RS07120 IPR022879 V-type ATP synthase regulatory subunit B/beta THIMO_RS07120 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THIMO_RS07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07125 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THIMO_RS07125 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension THIMO_RS07125 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily THIMO_RS07125 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain THIMO_RS07125 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07125 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal THIMO_RS07125 IPR022878 V-type ATP synthase catalytic alpha chain THIMO_RS07130 IPR038495 V-type ATPase subunit E, C-terminal domain superfamily THIMO_RS07130 IPR002842 V-type ATPase subunit E THIMO_RS07140 IPR002379 V-ATPase proteolipid subunit C-like domain THIMO_RS07140 IPR035921 F/V-ATP synthase subunit C superfamily THIMO_RS07140 IPR038662 F1F0 ATP synthase subunit C superfamily THIMO_RS07140 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site THIMO_RS07140 IPR000454 ATP synthase, F0 complex, subunit C THIMO_RS07140 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast THIMO_RS07145 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family THIMO_RS07175 IPR024899 Nitrogen fixation-sustaining protein CowN THIMO_RS07195 IPR016187 C-type lectin fold THIMO_RS07195 IPR005532 Sulfatase-modifying factor enzyme THIMO_RS07195 IPR042095 Sulfatase-modifying factor enzyme superfamily THIMO_RS07205 IPR017924 RNA-binding protein YhbY THIMO_RS07205 IPR001890 RNA-binding, CRM domain THIMO_RS07205 IPR035920 YhbY-like superfamily THIMO_RS07220 IPR000529 Ribosomal protein S6 THIMO_RS07220 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 THIMO_RS07220 IPR035980 Ribosomal protein S6 superfamily THIMO_RS07220 IPR020814 Ribosomal protein S6, plastid/chloroplast THIMO_RS07225 IPR001648 Ribosomal protein S18 THIMO_RS07225 IPR036870 Ribosomal protein S18 superfamily THIMO_RS07225 IPR018275 Ribosomal protein S18, conserved site THIMO_RS07235 IPR036935 Ribosomal protein L9, N-terminal domain superfamily THIMO_RS07235 IPR020070 Ribosomal protein L9, N-terminal THIMO_RS07235 IPR036791 Ribosomal protein L9, C-terminal domain superfamily THIMO_RS07235 IPR020069 Ribosomal protein L9, C-terminal THIMO_RS07235 IPR020594 Ribosomal protein L9, bacteria/chloroplast THIMO_RS07235 IPR009027 Ribosomal protein L9/RNase H1, N-terminal THIMO_RS07235 IPR000244 Ribosomal protein L9 THIMO_RS07240 IPR003593 AAA+ ATPase domain THIMO_RS07240 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07240 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal THIMO_RS07240 IPR007693 DNA helicase, DnaB-like, N-terminal THIMO_RS07240 IPR007694 DNA helicase, DnaB-like, C-terminal THIMO_RS07240 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily THIMO_RS07240 IPR007692 DNA helicase, DnaB type THIMO_RS07245 IPR029066 PLP-binding barrel THIMO_RS07245 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site THIMO_RS07245 IPR001608 Alanine racemase, N-terminal THIMO_RS07245 IPR000821 Alanine racemase THIMO_RS07245 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal THIMO_RS07245 IPR011079 Alanine racemase, C-terminal THIMO_RS07250 IPR003593 AAA+ ATPase domain THIMO_RS07250 IPR004504 DNA repair protein RadA THIMO_RS07250 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07250 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain THIMO_RS07250 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS07250 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS07250 IPR041166 LapB, rubredoxin metal binding domain THIMO_RS07255 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THIMO_RS07255 IPR001296 Glycosyl transferase, family 1 THIMO_RS07260 IPR032816 SNARE associated Golgi protein THIMO_RS07265 IPR036629 YjbJ superfamily THIMO_RS07265 IPR008462 CsbD-like domain THIMO_RS07265 IPR026042 Stress response protein YjbJ THIMO_RS07275 IPR002549 Transmembrane protein TqsA-like THIMO_RS07280 IPR001189 Manganese/iron superoxide dismutase THIMO_RS07280 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily THIMO_RS07280 IPR019831 Manganese/iron superoxide dismutase, N-terminal THIMO_RS07280 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily THIMO_RS07280 IPR019832 Manganese/iron superoxide dismutase, C-terminal THIMO_RS07280 IPR019833 Manganese/iron superoxide dismutase, binding site THIMO_RS07285 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone THIMO_RS07285 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily THIMO_RS07285 IPR001424 Superoxide dismutase, copper/zinc binding domain THIMO_RS07285 IPR018152 Superoxide dismutase, copper/zinc, binding site THIMO_RS07305 IPR035979 RNA-binding domain superfamily THIMO_RS07305 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily THIMO_RS07305 IPR000504 RNA recognition motif domain THIMO_RS07315 IPR010233 Ubiquinone biosynthesis O-methyltransferase THIMO_RS07315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS07330 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type THIMO_RS07330 IPR003593 AAA+ ATPase domain THIMO_RS07330 IPR003439 ABC transporter-like THIMO_RS07330 IPR017871 ABC transporter, conserved site THIMO_RS07330 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07335 IPR003593 AAA+ ATPase domain THIMO_RS07335 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07335 IPR000253 Forkhead-associated (FHA) domain THIMO_RS07335 IPR013525 ABC-2 type transporter THIMO_RS07335 IPR008984 SMAD/FHA domain superfamily THIMO_RS07335 IPR017871 ABC transporter, conserved site THIMO_RS07335 IPR003439 ABC transporter-like THIMO_RS07340 IPR017441 Protein kinase, ATP binding site THIMO_RS07340 IPR008271 Serine/threonine-protein kinase, active site THIMO_RS07340 IPR005543 PASTA domain THIMO_RS07340 IPR011009 Protein kinase-like domain superfamily THIMO_RS07340 IPR000719 Protein kinase domain THIMO_RS07360 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain THIMO_RS07360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS07360 IPR035906 MetI-like superfamily THIMO_RS07365 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS07365 IPR035906 MetI-like superfamily THIMO_RS07365 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain THIMO_RS07370 IPR018313 Solute-binding protein family 3, conserved site THIMO_RS07370 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THIMO_RS07380 IPR033248 Transketolase, C-terminal domain THIMO_RS07380 IPR033247 Transketolase family THIMO_RS07380 IPR005474 Transketolase, N-terminal THIMO_RS07380 IPR020826 Transketolase binding site THIMO_RS07380 IPR029061 Thiamin diphosphate-binding fold THIMO_RS07380 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THIMO_RS07380 IPR005478 Transketolase, bacterial-like THIMO_RS07380 IPR005475 Transketolase-like, pyrimidine-binding domain THIMO_RS07395 IPR004772 TrkH potassium transport family THIMO_RS07395 IPR003445 Cation transporter THIMO_RS07435 IPR017039 Virulence factor BrkB THIMO_RS07440 IPR010305 Protein of unknown function DUF903 THIMO_RS07440 IPR010920 LSM domain superfamily THIMO_RS07445 IPR033655 RelA, TGS domain THIMO_RS07445 IPR007685 RelA/SpoT THIMO_RS07445 IPR004811 RelA/SpoT family THIMO_RS07445 IPR003607 HD/PDEase domain THIMO_RS07445 IPR012676 TGS-like THIMO_RS07445 IPR004095 TGS THIMO_RS07445 IPR012675 Beta-grasp domain superfamily THIMO_RS07445 IPR002912 ACT domain THIMO_RS07465 IPR003439 ABC transporter-like THIMO_RS07465 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07465 IPR017871 ABC transporter, conserved site THIMO_RS07465 IPR003593 AAA+ ATPase domain THIMO_RS07470 IPR013830 SGNH hydrolase-type esterase domain THIMO_RS07470 IPR036514 SGNH hydrolase superfamily THIMO_RS07480 IPR003399 Mce/MlaD THIMO_RS07495 IPR035909 Methylesterase CheB, C-terminal THIMO_RS07495 IPR011006 CheY-like superfamily THIMO_RS07495 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type THIMO_RS07495 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS07495 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase THIMO_RS07505 IPR005372 Uncharacterised protein family UPF0182 THIMO_RS07520 IPR009057 Homeobox-like domain superfamily THIMO_RS07520 IPR002514 Transposase IS3/IS911family THIMO_RS07520 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS07530 IPR033752 MetA family THIMO_RS07530 IPR029062 Class I glutamine amidotransferase-like THIMO_RS07540 IPR009010 Aspartate decarboxylase-like domain superfamily THIMO_RS07540 IPR006656 Molybdopterin oxidoreductase THIMO_RS07540 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain THIMO_RS07540 IPR006657 Molybdopterin dinucleotide-binding domain THIMO_RS07545 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS07545 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS07550 IPR007059 DMSO reductase anchor subunit (DmsC) THIMO_RS07555 IPR007372 Lipid/polyisoprenoid-binding, YceI-like THIMO_RS07555 IPR023480 Uncharacterised protein family UPF0312/YceI THIMO_RS07555 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily THIMO_RS07560 IPR016174 Di-haem cytochrome, transmembrane THIMO_RS07560 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase THIMO_RS07580 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily THIMO_RS07580 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THIMO_RS07580 IPR023753 FAD/NAD(P)-binding domain THIMO_RS07580 IPR023536 Coenzyme A disulphide reductase, staphyolococci THIMO_RS07580 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS07580 IPR017758 Coenzyme A disulphide reductase THIMO_RS07585 IPR028261 Dihydroprymidine dehydrogenase domain II THIMO_RS07585 IPR023753 FAD/NAD(P)-binding domain THIMO_RS07585 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS07585 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS07585 IPR009051 Alpha-helical ferredoxin THIMO_RS07585 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 THIMO_RS07590 IPR005134 Uncharacterised protein family UPF0114 THIMO_RS07590 IPR020761 Uncharacterised protein family UPF0114, bacteria THIMO_RS07595 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding THIMO_RS07595 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site THIMO_RS07595 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain THIMO_RS07595 IPR010979 Ribosomal protein S13-like, H2TH THIMO_RS07595 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type THIMO_RS07595 IPR035937 MutM-like, N-terminal THIMO_RS07600 IPR003593 AAA+ ATPase domain THIMO_RS07600 IPR013701 DEAD/H associated THIMO_RS07600 IPR011545 DEAD/DEAH box helicase domain THIMO_RS07600 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS07600 IPR001650 Helicase, C-terminal THIMO_RS07600 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07620 IPR022488 Polyphosphate kinase-2-related THIMO_RS07620 IPR022489 Polyphosphate:AMP phosphotransferase THIMO_RS07620 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07625 IPR029069 HotDog domain superfamily THIMO_RS07625 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain THIMO_RS07625 IPR006683 Thioesterase domain THIMO_RS07625 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase THIMO_RS07645 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THIMO_RS07645 IPR001036 Acriflavin resistance protein THIMO_RS07655 IPR023346 Lysozyme-like domain superfamily THIMO_RS07655 IPR031376 Penicillin-binding protein, OB-like domain THIMO_RS07655 IPR001264 Glycosyl transferase, family 51 THIMO_RS07655 IPR012338 Beta-lactamase/transpeptidase-like THIMO_RS07655 IPR036950 Penicillin binding protein transglycosylase domain THIMO_RS07655 IPR001460 Penicillin-binding protein, transpeptidase THIMO_RS07660 IPR011545 DEAD/DEAH box helicase domain THIMO_RS07660 IPR001650 Helicase, C-terminal THIMO_RS07660 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS07660 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal THIMO_RS07660 IPR007502 Helicase-associated domain THIMO_RS07660 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07660 IPR010225 ATP-dependent helicase HrpB THIMO_RS07670 IPR011006 CheY-like superfamily THIMO_RS07670 IPR029787 Nucleotide cyclase THIMO_RS07670 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS07670 IPR000160 GGDEF domain THIMO_RS07680 IPR023192 TGS-like domain superfamily THIMO_RS07680 IPR012675 Beta-grasp domain superfamily THIMO_RS07680 IPR012676 TGS-like THIMO_RS07680 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 THIMO_RS07680 IPR041706 YchF, N-terminal THIMO_RS07680 IPR013029 YchF, C-terminal domain THIMO_RS07680 IPR031167 OBG-type guanine nucleotide-binding (G) domain THIMO_RS07680 IPR006073 GTP binding domain THIMO_RS07680 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07680 IPR004095 TGS THIMO_RS07700 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase THIMO_RS07700 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily THIMO_RS07705 IPR003660 HAMP domain THIMO_RS07705 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS07705 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS07705 IPR005467 Histidine kinase domain THIMO_RS07705 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THIMO_RS07705 IPR019247 Histidine kinase BarA, N-terminal THIMO_RS07705 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS07705 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS07705 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS07705 IPR036641 HPT domain superfamily THIMO_RS07705 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS07705 IPR011006 CheY-like superfamily THIMO_RS07710 IPR001926 Pyridoxal-phosphate dependent enzyme THIMO_RS07710 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site THIMO_RS07710 IPR005858 Cysteine synthase CysM THIMO_RS07710 IPR005856 Cysteine synthase THIMO_RS07710 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THIMO_RS07715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS07715 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS07715 IPR002792 TRAM domain THIMO_RS07715 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD THIMO_RS07715 IPR010280 (Uracil-5)-methyltransferase family THIMO_RS07715 IPR030390 RNA methyltransferase TrmA, active site THIMO_RS07715 IPR030391 RNA methyltransferase TrmA, conserved site THIMO_RS07720 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07720 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain THIMO_RS07730 IPR040982 DNA polymerase III alpha subunit finger domain THIMO_RS07730 IPR016195 Polymerase/histidinol phosphatase-like THIMO_RS07730 IPR004805 DNA polymerase III, alpha subunit THIMO_RS07730 IPR003141 Polymerase/histidinol phosphatase, N-terminal THIMO_RS07730 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type THIMO_RS07730 IPR004013 PHP domain THIMO_RS07730 IPR029460 DNA polymerase, helix-hairpin-helix motif THIMO_RS07730 IPR023073 DNA polymerase, error-prone THIMO_RS07730 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain THIMO_RS07740 IPR003593 AAA+ ATPase domain THIMO_RS07740 IPR013765 DNA recombination and repair protein RecA THIMO_RS07740 IPR020584 DNA recombination/repair protein RecA, conserved site THIMO_RS07740 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07740 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain THIMO_RS07740 IPR023400 DNA recombination and repair protein RecA, C-terminal THIMO_RS07740 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface THIMO_RS07745 IPR039418 LexA-like THIMO_RS07745 IPR006200 Transcription regulator LexA THIMO_RS07745 IPR006199 LexA repressor, DNA-binding domain THIMO_RS07745 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS07745 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS07745 IPR036286 LexA/Signal peptidase-like superfamily THIMO_RS07745 IPR006197 Peptidase S24, LexA-like THIMO_RS07745 IPR015927 Peptidase S24/S26A/S26B/S26C THIMO_RS07750 IPR033134 Asp/Glu racemase, active site 2 THIMO_RS07750 IPR018187 Asp/Glu racemase, active site 1 THIMO_RS07750 IPR001920 Asp/Glu racemase THIMO_RS07750 IPR015942 Asp/Glu/hydantoin racemase THIMO_RS07750 IPR004391 Glutamate racemase THIMO_RS07775 IPR001585 Transaldolase/Fructose-6-phosphate aldolase THIMO_RS07775 IPR004730 Transaldolase type 1 THIMO_RS07775 IPR013785 Aldolase-type TIM barrel THIMO_RS07775 IPR018225 Transaldolase, active site THIMO_RS07780 IPR001509 NAD-dependent epimerase/dehydratase THIMO_RS07780 IPR036291 NAD(P)-binding domain superfamily THIMO_RS07790 IPR000639 Epoxide hydrolase-like THIMO_RS07790 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS07790 IPR029058 Alpha/Beta hydrolase fold THIMO_RS07795 IPR001555 Phosphoribosylglycinamide formyltransferase, active site THIMO_RS07795 IPR004607 Phosphoribosylglycinamide formyltransferase THIMO_RS07795 IPR036477 Formyl transferase, N-terminal domain superfamily THIMO_RS07795 IPR002376 Formyl transferase, N-terminal THIMO_RS07800 IPR010918 PurM-like, C-terminal domain THIMO_RS07800 IPR036676 PurM-like, C-terminal domain superfamily THIMO_RS07800 IPR016188 PurM-like, N-terminal domain THIMO_RS07800 IPR036921 PurM-like, N-terminal domain superfamily THIMO_RS07800 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase THIMO_RS07805 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase THIMO_RS07805 IPR000462 CDP-alcohol phosphatidyltransferase THIMO_RS07810 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae THIMO_RS07810 IPR013317 Chromosomal replication initiator protein DnaA THIMO_RS07810 IPR017788 DnaA regulatory inactivator Hda THIMO_RS07810 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07810 IPR020591 Chromosomal replication control, initiator DnaA-like THIMO_RS07815 IPR005025 NADPH-dependent FMN reductase-like THIMO_RS07815 IPR001226 Flavodoxin, conserved site THIMO_RS07815 IPR029039 Flavoprotein-like superfamily THIMO_RS07815 IPR008254 Flavodoxin/nitric oxide synthase THIMO_RS07815 IPR010089 Flavoprotein WrbA-like THIMO_RS07820 IPR036046 Acylphosphatase-like domain superfamily THIMO_RS07820 IPR020456 Acylphosphatase THIMO_RS07820 IPR017968 Acylphosphatase, conserved site THIMO_RS07820 IPR001792 Acylphosphatase-like domain THIMO_RS07835 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit THIMO_RS07835 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS07835 IPR029058 Alpha/Beta hydrolase fold THIMO_RS07840 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit THIMO_RS07845 IPR020610 Thiolase, active site THIMO_RS07845 IPR002155 Thiolase THIMO_RS07845 IPR020616 Thiolase, N-terminal THIMO_RS07845 IPR020613 Thiolase, conserved site THIMO_RS07845 IPR020617 Thiolase, C-terminal THIMO_RS07845 IPR016039 Thiolase-like THIMO_RS07845 IPR020615 Thiolase, acyl-enzyme intermediate active site THIMO_RS07850 IPR012909 PHA accumulation regulator DNA-binding, N-terminal THIMO_RS07850 IPR007897 PHB accumulation regulatory THIMO_RS07850 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR THIMO_RS07855 IPR018968 Phasin THIMO_RS07860 IPR036291 NAD(P)-binding domain superfamily THIMO_RS07860 IPR011283 Acetoacetyl-CoA reductase THIMO_RS07860 IPR002347 Short-chain dehydrogenase/reductase SDR THIMO_RS07860 IPR020904 Short-chain dehydrogenase/reductase, conserved site THIMO_RS07865 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily THIMO_RS07865 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 THIMO_RS07870 IPR017941 Rieske [2Fe-2S] iron-sulphur domain THIMO_RS07870 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily THIMO_RS07870 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit THIMO_RS07870 IPR014349 Rieske iron-sulphur protein THIMO_RS07870 IPR005805 Rieske iron-sulphur protein, C-terminal THIMO_RS07870 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal THIMO_RS07875 IPR016174 Di-haem cytochrome, transmembrane THIMO_RS07875 IPR030689 Cytochrome b THIMO_RS07875 IPR027387 Cytochrome b/b6-like domain superfamily THIMO_RS07875 IPR005798 Cytochrome b/b6, C-terminal THIMO_RS07875 IPR036150 Cytochrome b/b6, C-terminal domain superfamily THIMO_RS07875 IPR005797 Cytochrome b/b6, N-terminal THIMO_RS07880 IPR009056 Cytochrome c-like domain THIMO_RS07880 IPR036909 Cytochrome c-like domain superfamily THIMO_RS07880 IPR002326 Cytochrome c1 THIMO_RS07885 IPR036282 Glutathione S-transferase, C-terminal domain superfamily THIMO_RS07885 IPR036249 Thioredoxin-like superfamily THIMO_RS07885 IPR034341 Stringent starvation protein A, N-terminal THIMO_RS07885 IPR004046 Glutathione S-transferase, C-terminal THIMO_RS07885 IPR004045 Glutathione S-transferase, N-terminal THIMO_RS07885 IPR040079 Glutathione Transferase family THIMO_RS07885 IPR010987 Glutathione S-transferase, C-terminal-like THIMO_RS07890 IPR036760 SspB-like superfamily THIMO_RS07890 IPR007481 Stringent starvation protein B THIMO_RS07905 IPR022985 Sulfate transporter CysZ THIMO_RS07920 IPR025708 Heat shock protein 15 THIMO_RS07920 IPR002942 RNA-binding S4 domain THIMO_RS07920 IPR036986 RNA-binding S4 domain superfamily THIMO_RS07925 IPR011767 Glutaredoxin active site THIMO_RS07925 IPR002109 Glutaredoxin THIMO_RS07925 IPR014025 Glutaredoxin subgroup THIMO_RS07925 IPR011900 Glutaredoxin, GrxC THIMO_RS07925 IPR036249 Thioredoxin-like superfamily THIMO_RS07930 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily THIMO_RS07930 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase THIMO_RS07930 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal THIMO_RS07930 IPR014782 Peptidase M1, membrane alanine aminopeptidase THIMO_RS07930 IPR042097 Aminopeptidase N-like , N-terminal THIMO_RS07930 IPR012779 Peptidase M1, alanyl aminopeptidase THIMO_RS07930 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily THIMO_RS07930 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold THIMO_RS07930 IPR027268 Peptidase M4/M1, CTD superfamily THIMO_RS07950 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal THIMO_RS07950 IPR003346 Transposase, IS116/IS110/IS902 THIMO_RS07970 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THIMO_RS07975 IPR003593 AAA+ ATPase domain THIMO_RS07975 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS07975 IPR017871 ABC transporter, conserved site THIMO_RS07975 IPR003439 ABC transporter-like THIMO_RS07980 IPR000412 ABC-2 transporter THIMO_RS07985 IPR000412 ABC-2 transporter THIMO_RS07995 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal THIMO_RS07995 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain THIMO_RS07995 IPR006222 Aminomethyltransferase, folate-binding domain THIMO_RS07995 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 THIMO_RS07995 IPR028896 Aminomethyltransferase-like THIMO_RS07995 IPR006223 Glycine cleavage system T protein THIMO_RS07995 IPR022903 Glycine cleavage system T protein, bacteria THIMO_RS08000 IPR033753 Glycine cleavage system H-protein/Simiate THIMO_RS08000 IPR000089 Biotin/lipoyl attachment THIMO_RS08000 IPR017453 Glycine cleavage system H-protein, subgroup THIMO_RS08000 IPR002930 Glycine cleavage system H-protein THIMO_RS08000 IPR011053 Single hybrid motif THIMO_RS08000 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site THIMO_RS08005 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 THIMO_RS08005 IPR020581 Glycine cleavage system P protein THIMO_RS08005 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS08005 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS08005 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS08010 IPR002065 Thiol peroxidase Tpx THIMO_RS08010 IPR013766 Thioredoxin domain THIMO_RS08010 IPR018219 Thiol peroxidase conserved site THIMO_RS08010 IPR036249 Thioredoxin-like superfamily THIMO_RS08010 IPR013740 Redoxin THIMO_RS08015 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS08015 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 THIMO_RS08015 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS08015 IPR020581 Glycine cleavage system P protein THIMO_RS08015 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS08020 IPR000829 DAGK family THIMO_RS08020 IPR036945 Diacylglycerol kinase (DAGK) superfamily THIMO_RS08020 IPR033718 Diacylglycerol kinase, prokaryotic THIMO_RS08025 IPR012245 Molybdenum cofactor biosynthesis protein MoaB THIMO_RS08025 IPR001453 MoaB/Mog domain THIMO_RS08025 IPR036425 MoaB/Mog-like domain superfamily THIMO_RS08025 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria THIMO_RS08025 IPR008284 Molybdenum cofactor biosynthesis, conserved site THIMO_RS08030 IPR001453 MoaB/Mog domain THIMO_RS08030 IPR036425 MoaB/Mog-like domain superfamily THIMO_RS08030 IPR008284 Molybdenum cofactor biosynthesis, conserved site THIMO_RS08030 IPR038987 Molybdopterin biosynthesis protein MoeA-like THIMO_RS08030 IPR005110 MoeA, N-terminal and linker domain THIMO_RS08030 IPR036688 MoeA, C-terminal, domain IV superfamily THIMO_RS08030 IPR005111 MoeA, C-terminal, domain IV THIMO_RS08030 IPR036135 MoeA, N-terminal and linker domain superfamily THIMO_RS08035 IPR003749 Sulfur carrier ThiS/MoaD-like THIMO_RS08035 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THIMO_RS08035 IPR012675 Beta-grasp domain superfamily THIMO_RS08040 IPR031157 Tr-type G domain, conserved site THIMO_RS08040 IPR004161 Translation elongation factor EFTu-like, domain 2 THIMO_RS08040 IPR004540 Translation elongation factor EFG/EF2 THIMO_RS08040 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS08040 IPR009000 Translation protein, beta-barrel domain superfamily THIMO_RS08040 IPR041095 Elongation Factor G, domain II THIMO_RS08040 IPR000795 Transcription factor, GTP-binding domain THIMO_RS08040 IPR000640 Elongation factor EFG, domain V-like THIMO_RS08040 IPR005517 Translation elongation factor EFG/EF2, domain IV THIMO_RS08040 IPR005225 Small GTP-binding protein domain THIMO_RS08040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS08040 IPR009022 Elongation factor G, domain III THIMO_RS08040 IPR035647 EF-G domain III/V-like THIMO_RS08040 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS08040 IPR035649 EFG, domain V THIMO_RS08045 IPR038063 L,D-transpeptidase catalytic domain-like THIMO_RS08045 IPR005490 L,D-transpeptidase catalytic domain THIMO_RS08045 IPR041597 L,D-transpeptidase C-terminal domain THIMO_RS08060 IPR011006 CheY-like superfamily THIMO_RS08060 IPR003607 HD/PDEase domain THIMO_RS08060 IPR037522 HD-GYP domain THIMO_RS08060 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS08065 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS08065 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS08065 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THIMO_RS08065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS08065 IPR036641 HPT domain superfamily THIMO_RS08065 IPR011006 CheY-like superfamily THIMO_RS08065 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS08065 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS08065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS08065 IPR005467 Histidine kinase domain THIMO_RS08070 IPR006311 Twin-arginine translocation pathway, signal sequence THIMO_RS08070 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain THIMO_RS08070 IPR021731 AMIN domain THIMO_RS08075 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS08075 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE THIMO_RS08080 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr THIMO_RS08080 IPR036652 YjeF N-terminal domain superfamily THIMO_RS08080 IPR004443 YjeF N-terminal domain THIMO_RS08080 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase THIMO_RS08080 IPR029056 Ribokinase-like THIMO_RS08085 IPR018223 Argininosuccinate synthase, conserved site THIMO_RS08085 IPR023434 Argininosuccinate synthase, type 1 subfamily THIMO_RS08085 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body THIMO_RS08085 IPR001518 Argininosuccinate synthase THIMO_RS08085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS08090 IPR033469 CYTH-like domain superfamily THIMO_RS08090 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like THIMO_RS08090 IPR023577 CYTH domain THIMO_RS08095 IPR030678 Peptide/nickel binding protein, MppA-type THIMO_RS08095 IPR000914 Solute-binding protein family 5 domain THIMO_RS08095 IPR023765 Solute-binding protein family 5, conserved site THIMO_RS08095 IPR039424 Solute-binding protein family 5 THIMO_RS08100 IPR009078 Ferritin-like superfamily THIMO_RS08100 IPR012348 Ribonucleotide reductase-like THIMO_RS08100 IPR033909 Ribonucleotide reductase small subunit THIMO_RS08100 IPR000358 Ribonucleotide reductase small subunit family THIMO_RS08105 IPR033248 Transketolase, C-terminal domain THIMO_RS08105 IPR029061 Thiamin diphosphate-binding fold THIMO_RS08105 IPR005475 Transketolase-like, pyrimidine-binding domain THIMO_RS08105 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THIMO_RS08110 IPR029061 Thiamin diphosphate-binding fold THIMO_RS08110 IPR001017 Dehydrogenase, E1 component THIMO_RS08115 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS08115 IPR000847 Transcription regulator HTH, LysR THIMO_RS08115 IPR005119 LysR, substrate-binding THIMO_RS08115 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS08125 IPR036038 Aminotransferase-like, PLP-dependent enzymes THIMO_RS08125 IPR005785 Branched-chain amino acid aminotransferase I THIMO_RS08125 IPR033939 Branched-chain aminotransferase THIMO_RS08125 IPR001544 Aminotransferase class IV THIMO_RS08125 IPR018300 Aminotransferase, class IV, conserved site THIMO_RS08130 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme THIMO_RS08130 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase THIMO_RS08130 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain THIMO_RS08140 IPR037254 HupF/HypC superfamily THIMO_RS08140 IPR001109 Hydrogenase expression/formation protein, HupF/HypC THIMO_RS08140 IPR019812 Hydrogenase assembly chaperone, conserved site THIMO_RS08150 IPR005177 Bifunctional kinase-pyrophosphorylase THIMO_RS08150 IPR026530 Phosphoenolpyruvate synthase regulatory protein THIMO_RS08165 IPR030865 Lipopolysaccharide assembly protein B THIMO_RS08165 IPR041166 LapB, rubredoxin metal binding domain THIMO_RS08165 IPR013026 Tetratricopeptide repeat-containing domain THIMO_RS08165 IPR019734 Tetratricopeptide repeat THIMO_RS08165 IPR011990 Tetratricopeptide-like helical domain superfamily THIMO_RS08170 IPR001754 Orotidine 5'-phosphate decarboxylase domain THIMO_RS08170 IPR018089 Orotidine 5'-phosphate decarboxylase, active site THIMO_RS08170 IPR014732 Orotidine 5'-phosphate decarboxylase THIMO_RS08170 IPR013785 Aldolase-type TIM barrel THIMO_RS08170 IPR011060 Ribulose-phosphate binding barrel THIMO_RS08175 IPR005835 Nucleotidyl transferase domain THIMO_RS08175 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type THIMO_RS08175 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS08180 IPR028366 Phosphate transport system protein PhoU THIMO_RS08180 IPR038078 PhoU-like domain superfamily THIMO_RS08180 IPR026022 PhoU domain THIMO_RS08200 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THIMO_RS08200 IPR001387 Cro/C1-type helix-turn-helix domain THIMO_RS08200 IPR013430 Toxin-antitoxin system, antidote protein, HigA THIMO_RS08215 IPR013783 Immunoglobulin-like fold THIMO_RS08215 IPR006047 Glycosyl hydrolase, family 13, catalytic domain THIMO_RS08215 IPR004193 Glycoside hydrolase, family 13, N-terminal THIMO_RS08215 IPR013780 Glycosyl hydrolase, all-beta THIMO_RS08215 IPR011837 Glycogen debranching enzyme, GlgX type THIMO_RS08215 IPR017853 Glycoside hydrolase superfamily THIMO_RS08215 IPR014756 Immunoglobulin E-set THIMO_RS08220 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS08220 IPR005467 Histidine kinase domain THIMO_RS08220 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS08220 IPR003660 HAMP domain THIMO_RS08220 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS08220 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS08225 IPR011006 CheY-like superfamily THIMO_RS08225 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS08225 IPR039420 Transcriptional regulatory protein WalR-like THIMO_RS08225 IPR001867 OmpR/PhoB-type DNA-binding domain THIMO_RS08225 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS08225 IPR016032 Signal transduction response regulator, C-terminal effector THIMO_RS08260 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS08260 IPR000595 Cyclic nucleotide-binding domain THIMO_RS08260 IPR012318 Crp-type HTH domain THIMO_RS08260 IPR018335 Transcription regulator HTH, Crp-type, conserved site THIMO_RS08260 IPR014710 RmlC-like jelly roll fold THIMO_RS08260 IPR018490 Cyclic nucleotide-binding-like THIMO_RS08260 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS08265 IPR010048 Hydroxylamine reductase THIMO_RS08265 IPR016099 Prismane-like, alpha/beta-sandwich THIMO_RS08265 IPR011254 Prismane-like superfamily THIMO_RS08265 IPR016100 Prismane, alpha-bundle THIMO_RS08265 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase THIMO_RS08270 IPR003848 Domain of unknown function DUF218 THIMO_RS08275 IPR037509 Phosphomethylpyrimidine synthase THIMO_RS08275 IPR025747 ThiC-associated domain THIMO_RS08275 IPR038521 ThiC/Bza superfamily THIMO_RS08275 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B THIMO_RS08280 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD THIMO_RS08280 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal THIMO_RS08280 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily THIMO_RS08280 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal THIMO_RS08280 IPR013785 Aldolase-type TIM barrel THIMO_RS08280 IPR004393 Nicotinate-nucleotide pyrophosphorylase THIMO_RS08280 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal THIMO_RS08290 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily THIMO_RS08290 IPR002502 N-acetylmuramoyl-L-alanine amidase domain THIMO_RS08305 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding THIMO_RS08305 IPR008909 DALR anticodon binding THIMO_RS08305 IPR035684 Arginyl-tRNA synthetase, catalytic core domain THIMO_RS08305 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily THIMO_RS08305 IPR005148 Arginyl tRNA synthetase N-terminal domain THIMO_RS08305 IPR001278 Arginine-tRNA ligase THIMO_RS08305 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THIMO_RS08310 IPR016181 Acyl-CoA N-acyltransferase THIMO_RS08310 IPR001110 Uncharacterised protein family UPF0012, conserved site THIMO_RS08310 IPR000182 GNAT domain THIMO_RS08310 IPR036526 Carbon-nitrogen hydrolase superfamily THIMO_RS08310 IPR003010 Carbon-nitrogen hydrolase THIMO_RS08315 IPR020843 Polyketide synthase, enoylreductase domain THIMO_RS08315 IPR013149 Alcohol dehydrogenase, C-terminal THIMO_RS08315 IPR011032 GroES-like superfamily THIMO_RS08315 IPR036291 NAD(P)-binding domain superfamily THIMO_RS08315 IPR013154 Alcohol dehydrogenase, N-terminal THIMO_RS08325 IPR008978 HSP20-like chaperone THIMO_RS08325 IPR002068 Alpha crystallin/Hsp20 domain THIMO_RS08330 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase THIMO_RS08330 IPR011042 Six-bladed beta-propeller, TolB-like THIMO_RS08330 IPR012938 Glucose/Sorbosone dehydrogenase THIMO_RS08400 IPR017637 Putative 2-aminoethylphosphonate binding protein, ABC transporter THIMO_RS08400 IPR006059 Bacterial extracellular solute-binding protein THIMO_RS08405 IPR035906 MetI-like superfamily THIMO_RS08405 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS08405 IPR017661 2-aminoethylphosphonate ABC transport system, membrane component PhnV THIMO_RS08410 IPR003593 AAA+ ATPase domain THIMO_RS08410 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal THIMO_RS08410 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS08410 IPR024765 TOBE-like domain THIMO_RS08410 IPR003439 ABC transporter-like THIMO_RS08410 IPR017871 ABC transporter, conserved site THIMO_RS08410 IPR008995 Molybdate/tungstate binding, C-terminal THIMO_RS08410 IPR005666 Sulphate transport system permease protein 1 THIMO_RS08435 IPR013762 Integrase-like, catalytic domain superfamily THIMO_RS08435 IPR011010 DNA breaking-rejoining enzyme, catalytic core THIMO_RS08435 IPR010998 Integrase/recombinase, N-terminal THIMO_RS08435 IPR025166 Integrase, DNA-binding domain THIMO_RS08435 IPR002104 Integrase, catalytic domain THIMO_RS08435 IPR038488 Integrase, DNA-binding domain superfamily THIMO_RS08490 IPR001650 Helicase, C-terminal THIMO_RS08490 IPR022138 Helicase SWF/SNF-related THIMO_RS08490 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS08490 IPR038718 SNF2-like, N-terminal domain superfamily THIMO_RS08490 IPR000330 SNF2-related, N-terminal domain THIMO_RS08490 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS08510 IPR022838 GTP cyclohydrolase FolE2 THIMO_RS08510 IPR003801 GTP cyclohydrolase FolE2/MptA THIMO_RS08515 IPR033749 Polyprenyl synthetase, conserved site THIMO_RS08515 IPR008949 Isoprenoid synthase domain superfamily THIMO_RS08515 IPR000092 Polyprenyl synthetase THIMO_RS08520 IPR003761 Exonuclease VII, small subunit THIMO_RS08520 IPR037004 Exonuclease VII, small subunit superfamily THIMO_RS08525 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS08525 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS08525 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS08525 IPR002288 DNA gyrase B subunit, C-terminal THIMO_RS08525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS08525 IPR006171 TOPRIM domain THIMO_RS08525 IPR013760 DNA topoisomerase, type IIA-like domain superfamily THIMO_RS08525 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal THIMO_RS08525 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 THIMO_RS08525 IPR001241 DNA topoisomerase, type IIA THIMO_RS08525 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative THIMO_RS08525 IPR018522 DNA topoisomerase, type IIA, conserved site THIMO_RS08535 IPR007208 Na(+)/H(+) antiporter subunit F-like THIMO_RS08540 IPR002758 Na+/H+ antiporter subunit E THIMO_RS08545 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THIMO_RS08545 IPR004775 Na(+)/H(+) antiporter subunit D1 THIMO_RS08550 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like THIMO_RS08550 IPR006673 Mnh complex subunit C1 THIMO_RS08555 IPR025383 Domain of unknown function DUF4040 THIMO_RS08555 IPR005281 Monovalent cation:proton antiporter, subunit B THIMO_RS08555 IPR005663 Monovalent cation proton antiporter subunit A THIMO_RS08555 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THIMO_RS08555 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal THIMO_RS08555 IPR007182 Na+/H+ antiporter MnhB subunit-related protein THIMO_RS08560 IPR023500 Zinc transporter ZitB THIMO_RS08560 IPR027469 Cation efflux transmembrane domain superfamily THIMO_RS08560 IPR036837 Cation efflux protein, cytoplasmic domain superfamily THIMO_RS08560 IPR002524 Cation efflux protein THIMO_RS08570 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain THIMO_RS08570 IPR011640 Ferrous iron transport protein B, C-terminal THIMO_RS08570 IPR041069 FeoB, cytosolic helical domain THIMO_RS08570 IPR030389 FeoB-type guanine nucleotide-binding (G) domain THIMO_RS08570 IPR003373 Ferrous iron transport protein B THIMO_RS08570 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS08570 IPR005225 Small GTP-binding protein domain THIMO_RS08575 IPR038157 Ferrous iron transporter, core domain THIMO_RS08575 IPR008988 Transcriptional repressor, C-terminal THIMO_RS08575 IPR007167 Ferrous iron transporter FeoA domain THIMO_RS08585 IPR014369 Glycine/Sarcosine N-methyltransferase THIMO_RS08585 IPR041698 Methyltransferase domain 25 THIMO_RS08585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS08590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS08590 IPR013216 Methyltransferase type 11 THIMO_RS08595 IPR020602 GTP cyclohydrolase I domain THIMO_RS08595 IPR018234 GTP cyclohydrolase I, conserved site THIMO_RS08595 IPR001474 GTP cyclohydrolase I THIMO_RS08600 IPR006426 Asparagine synthase, glutamine-hydrolyzing THIMO_RS08600 IPR001962 Asparagine synthase THIMO_RS08600 IPR033738 Asparagine synthase, N-terminal domain THIMO_RS08600 IPR017932 Glutamine amidotransferase type 2 domain THIMO_RS08600 IPR029055 Nucleophile aminohydrolases, N-terminal THIMO_RS08605 IPR004101 Mur ligase, C-terminal THIMO_RS08605 IPR013651 ATP-grasp fold, RimK-type THIMO_RS08605 IPR011810 Cyanophycin synthetase THIMO_RS08605 IPR036615 Mur ligase, C-terminal domain superfamily THIMO_RS08605 IPR013221 Mur ligase, central THIMO_RS08605 IPR011761 ATP-grasp fold THIMO_RS08605 IPR036565 Mur-like, catalytic domain superfamily THIMO_RS08610 IPR023367 Peptidase M42, domain 2 THIMO_RS08610 IPR008007 Peptidase M42 THIMO_RS08615 IPR004881 Ribosome biogenesis GTPase RsgA THIMO_RS08615 IPR010914 RsgA GTPase domain THIMO_RS08615 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS08615 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain THIMO_RS08620 IPR013520 Exonuclease, RNase T/DNA polymerase III THIMO_RS08620 IPR022894 Oligoribonuclease THIMO_RS08620 IPR036397 Ribonuclease H superfamily THIMO_RS08620 IPR012337 Ribonuclease H-like superfamily THIMO_RS08625 IPR004453 Epoxyqueuosine reductase QueG THIMO_RS08625 IPR013542 Domain of unknown function DUF1730 THIMO_RS08625 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS08625 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS08625 IPR009051 Alpha-helical ferredoxin THIMO_RS08635 IPR011257 DNA glycosylase THIMO_RS08635 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal THIMO_RS08635 IPR004035 Endonuclease III, iron-sulphur binding site THIMO_RS08635 IPR000445 Helix-hairpin-helix motif THIMO_RS08635 IPR003265 HhH-GPD domain THIMO_RS08635 IPR005759 Endonuclease III THIMO_RS08635 IPR004036 Endonuclease III-like, conserved site-2 THIMO_RS08635 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif THIMO_RS08640 IPR000286 Histone deacetylase family THIMO_RS08640 IPR023801 Histone deacetylase domain THIMO_RS08640 IPR037138 Histone deacetylase domain superfamily THIMO_RS08640 IPR023696 Ureohydrolase domain superfamily THIMO_RS08645 IPR016102 Succinyl-CoA synthetase-like THIMO_RS08645 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS08645 IPR003781 CoA-binding THIMO_RS08645 IPR000182 GNAT domain THIMO_RS08645 IPR036291 NAD(P)-binding domain superfamily THIMO_RS08645 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain THIMO_RS08645 IPR011761 ATP-grasp fold THIMO_RS08645 IPR016181 Acyl-CoA N-acyltransferase THIMO_RS08650 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 THIMO_RS08650 IPR000322 Glycoside hydrolase family 31 THIMO_RS08650 IPR011013 Galactose mutarotase-like domain superfamily THIMO_RS08650 IPR033403 Domain of unknown function DUF5110 THIMO_RS08650 IPR030459 Glycosyl hydrolases family 31, conserved site THIMO_RS08650 IPR025887 Glycoside hydrolase family 31, N-terminal domain THIMO_RS08650 IPR013780 Glycosyl hydrolase, all-beta THIMO_RS08650 IPR017853 Glycoside hydrolase superfamily THIMO_RS08650 IPR030458 Glycosyl hydrolases family 31, active site THIMO_RS08660 IPR011991 ArsR-like helix-turn-helix domain THIMO_RS08660 IPR001845 HTH ArsR-type DNA-binding domain THIMO_RS08660 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS08660 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS08665 IPR036196 Phosphotyrosine protein phosphatase I superfamily THIMO_RS08665 IPR014064 Arsenate reductase ArsC THIMO_RS08665 IPR023485 Phosphotyrosine protein phosphatase I THIMO_RS08670 IPR004706 Arsenical-resistance protein Acr3 THIMO_RS08670 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 THIMO_RS08670 IPR038770 Sodium/solute symporter superfamily THIMO_RS08675 IPR005524 Predicted permease DUF318 THIMO_RS08690 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS08690 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS08690 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS08690 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site THIMO_RS08690 IPR004839 Aminotransferase, class I/classII THIMO_RS08695 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS08695 IPR001650 Helicase, C-terminal THIMO_RS08695 IPR001943 UVR domain THIMO_RS08695 IPR036876 UVR domain superfamily THIMO_RS08695 IPR004807 UvrABC system, subunit B THIMO_RS08695 IPR041471 UvrB, interaction domain THIMO_RS08695 IPR024759 UvrB, YAD/RRR-motif-containing domain THIMO_RS08695 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS08695 IPR006935 Helicase/UvrB, N-terminal THIMO_RS08710 IPR007627 RNA polymerase sigma-70 region 2 THIMO_RS08710 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site THIMO_RS08710 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 THIMO_RS08710 IPR014286 RNA polymerase sigma-70 RpoE type THIMO_RS08710 IPR013324 RNA polymerase sigma factor, region 3/4-like THIMO_RS08710 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS08710 IPR013325 RNA polymerase sigma factor, region 2 THIMO_RS08710 IPR014284 RNA polymerase sigma-70 like domain THIMO_RS08710 IPR039425 RNA polymerase sigma-70 like THIMO_RS08720 IPR038484 MucB/RseB, C-terminal domain superfamily THIMO_RS08720 IPR033434 MucB/RseB, N-terminal THIMO_RS08720 IPR005588 MucB/RseB THIMO_RS08720 IPR033436 MucB/RseB, C-terminal THIMO_RS08725 IPR007359 Positive regulator of sigma(E), RseC/MucC THIMO_RS08725 IPR026268 Protein RseC THIMO_RS08730 IPR009003 Peptidase S1, PA clan THIMO_RS08730 IPR036034 PDZ superfamily THIMO_RS08730 IPR001478 PDZ domain THIMO_RS08730 IPR001940 Peptidase S1C THIMO_RS08730 IPR011782 Peptidase S1C, Do THIMO_RS08735 IPR035647 EF-G domain III/V-like THIMO_RS08735 IPR006297 Elongation factor 4 THIMO_RS08735 IPR000640 Elongation factor EFG, domain V-like THIMO_RS08735 IPR035654 Elongation factor 4, domain IV THIMO_RS08735 IPR013842 GTP-binding protein LepA, C-terminal THIMO_RS08735 IPR038363 LepA, C-terminal domain superfamily THIMO_RS08735 IPR031157 Tr-type G domain, conserved site THIMO_RS08735 IPR000795 Transcription factor, GTP-binding domain THIMO_RS08735 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS08735 IPR005225 Small GTP-binding protein domain THIMO_RS08740 IPR019756 Peptidase S26A, signal peptidase I, serine active site THIMO_RS08740 IPR019533 Peptidase S26 THIMO_RS08740 IPR019758 Peptidase S26A, signal peptidase I, conserved site THIMO_RS08740 IPR000223 Peptidase S26A, signal peptidase I THIMO_RS08740 IPR019757 Peptidase S26A, signal peptidase I, lysine active site THIMO_RS08740 IPR036286 LexA/Signal peptidase-like superfamily THIMO_RS08750 IPR000999 Ribonuclease III domain THIMO_RS08750 IPR036389 Ribonuclease III, endonuclease domain superfamily THIMO_RS08750 IPR011907 Ribonuclease III THIMO_RS08750 IPR014720 Double-stranded RNA-binding domain THIMO_RS08755 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS08755 IPR005225 Small GTP-binding protein domain THIMO_RS08755 IPR009019 K homology domain superfamily, prokaryotic type THIMO_RS08755 IPR004044 K Homology domain, type 2 THIMO_RS08755 IPR005662 GTP-binding protein Era THIMO_RS08755 IPR030388 Era-type guanine nucleotide-binding (G) domain THIMO_RS08755 IPR006073 GTP binding domain THIMO_RS08755 IPR015946 K homology domain-like, alpha/beta THIMO_RS08760 IPR003717 Recombination protein O, RecO THIMO_RS08760 IPR037278 ARFGAP/RecO-like zinc finger THIMO_RS08760 IPR022572 DNA replication/recombination mediator RecO, N-terminal THIMO_RS08760 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS08765 IPR011004 Trimeric LpxA-like superfamily THIMO_RS08765 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS08765 IPR011831 Glucose-1-phosphate adenylyltransferase THIMO_RS08765 IPR005836 ADP-glucose pyrophosphorylase, conserved site THIMO_RS08765 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial THIMO_RS08765 IPR005835 Nucleotidyl transferase domain THIMO_RS08785 IPR004680 Citrate transporter-like domain THIMO_RS08795 IPR019772 Ferrochelatase, active site THIMO_RS08795 IPR033644 Ferrochelatase, C-terminal THIMO_RS08795 IPR033659 Ferrochelatase, N-terminal THIMO_RS08795 IPR001015 Ferrochelatase THIMO_RS08815 IPR008250 P-type ATPase, A domain superfamily THIMO_RS08815 IPR006068 Cation-transporting P-type ATPase, C-terminal THIMO_RS08815 IPR004014 Cation-transporting P-type ATPase, N-terminal THIMO_RS08815 IPR023299 P-type ATPase, cytoplasmic domain N THIMO_RS08815 IPR018303 P-type ATPase, phosphorylation site THIMO_RS08815 IPR023298 P-type ATPase, transmembrane domain superfamily THIMO_RS08815 IPR036412 HAD-like superfamily THIMO_RS08815 IPR023214 HAD superfamily THIMO_RS08815 IPR001757 P-type ATPase THIMO_RS08820 IPR029058 Alpha/Beta hydrolase fold THIMO_RS08820 IPR005944 Proline iminopeptidase THIMO_RS08820 IPR002410 Peptidase S33 THIMO_RS08820 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS08825 IPR003732 D-aminoacyl-tRNA deacylase DTD THIMO_RS08825 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily THIMO_RS08830 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site THIMO_RS08830 IPR000807 Imidazoleglycerol-phosphate dehydratase THIMO_RS08830 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily THIMO_RS08830 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS08835 IPR013785 Aldolase-type TIM barrel THIMO_RS08835 IPR006062 Histidine biosynthesis THIMO_RS08835 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA THIMO_RS08835 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase THIMO_RS08835 IPR001252 Malate dehydrogenase, active site THIMO_RS08835 IPR011060 Ribulose-phosphate binding barrel THIMO_RS08840 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily THIMO_RS08840 IPR026660 Phosphoribosyl-AMP cyclohydrolase THIMO_RS08840 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain THIMO_RS08845 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase THIMO_RS08845 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like THIMO_RS08850 IPR006312 Sec-independent protein translocase protein TatA/E THIMO_RS08850 IPR003369 Sec-independent protein translocase protein TatA/B/E THIMO_RS08855 IPR003369 Sec-independent protein translocase protein TatA/B/E THIMO_RS08855 IPR018448 Twin-arginine translocation protein TatB THIMO_RS08860 IPR019820 Sec-independent periplasmic protein translocase, conserved site THIMO_RS08860 IPR002033 Sec-independent periplasmic protein translocase TatC THIMO_RS08865 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS08865 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS08865 IPR000847 Transcription regulator HTH, LysR THIMO_RS08865 IPR005119 LysR, substrate-binding THIMO_RS08870 IPR006036 Potassium uptake protein TrkA THIMO_RS08870 IPR023941 Glutathione-regulated potassium-efflux system protein KefC THIMO_RS08870 IPR038770 Sodium/solute symporter superfamily THIMO_RS08870 IPR036291 NAD(P)-binding domain superfamily THIMO_RS08870 IPR003148 Regulator of K+ conductance, N-terminal THIMO_RS08870 IPR004771 K+/H+ exchanger THIMO_RS08870 IPR006153 Cation/H+ exchanger THIMO_RS08880 IPR008302 Uncharacterised conserved protein UCP016719 THIMO_RS08885 IPR004651 Histidine biosynthesis, HisF THIMO_RS08885 IPR011060 Ribulose-phosphate binding barrel THIMO_RS08885 IPR006062 Histidine biosynthesis THIMO_RS08885 IPR013785 Aldolase-type TIM barrel THIMO_RS08895 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS THIMO_RS08895 IPR008915 Peptidase M50 THIMO_RS08895 IPR000644 CBS domain THIMO_RS08905 IPR002818 DJ-1/PfpI THIMO_RS08905 IPR029062 Class I glutamine amidotransferase-like THIMO_RS08905 IPR006286 Deglycase PfpI THIMO_RS08915 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase THIMO_RS08915 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS08915 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS08915 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS08920 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily THIMO_RS08920 IPR000755 D-alanyl-D-alanine dipeptidase THIMO_RS08925 IPR018211 Alcohol dehydrogenase, iron-type, conserved site THIMO_RS08925 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA THIMO_RS08930 IPR009057 Homeobox-like domain superfamily THIMO_RS08930 IPR018060 DNA binding HTH domain, AraC-type THIMO_RS08930 IPR009594 Transcription regulator HTH, AraC, N-terminal THIMO_RS08935 IPR001036 Acriflavin resistance protein THIMO_RS08935 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THIMO_RS08940 IPR006143 RND efflux pump, membrane fusion protein THIMO_RS08940 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THIMO_RS08945 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THIMO_RS08945 IPR001423 Lysophospholipase patatin, conserved site THIMO_RS08945 IPR002641 Patatin-like phospholipase domain THIMO_RS08955 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS08955 IPR013216 Methyltransferase type 11 THIMO_RS08965 IPR016174 Di-haem cytochrome, transmembrane THIMO_RS08965 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase THIMO_RS08975 IPR036968 Enolpyruvate transferase domain superfamily THIMO_RS08975 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase THIMO_RS08975 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site THIMO_RS08975 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta THIMO_RS08975 IPR001986 Enolpyruvate transferase domain THIMO_RS08980 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS08980 IPR011994 Cytidylate kinase domain THIMO_RS08980 IPR003136 Cytidylate kinase THIMO_RS08985 IPR000110 Ribosomal protein S1 THIMO_RS08985 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS08985 IPR022967 RNA-binding domain, S1 THIMO_RS08985 IPR003029 S1 domain THIMO_RS08990 IPR020816 Histone-like DNA-binding protein, conserved site THIMO_RS08990 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily THIMO_RS08990 IPR000119 Histone-like DNA-binding protein THIMO_RS08990 IPR005685 Integration host factor, beta subunit THIMO_RS09000 IPR007410 Copper chaperone PCuAC THIMO_RS09000 IPR036182 Copper chaperone PCuAC superfamily THIMO_RS09010 IPR037392 YfmP, Helix-Turn-Helix DNA binding domain THIMO_RS09010 IPR000551 MerR-type HTH domain THIMO_RS09010 IPR009061 Putative DNA-binding domain superfamily THIMO_RS09015 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE THIMO_RS09015 IPR029479 Nitroreductase THIMO_RS09015 IPR000415 Nitroreductase-like THIMO_RS09020 IPR001845 HTH ArsR-type DNA-binding domain THIMO_RS09020 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS09020 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS09020 IPR011991 ArsR-like helix-turn-helix domain THIMO_RS09025 IPR005225 Small GTP-binding protein domain THIMO_RS09025 IPR015946 K homology domain-like, alpha/beta THIMO_RS09025 IPR031166 EngA-type guanine nucleotide-binding (G) domain THIMO_RS09025 IPR016484 GTP-binding protein EngA THIMO_RS09025 IPR006073 GTP binding domain THIMO_RS09025 IPR032859 GTPase Der, C-terminal KH-domain-like THIMO_RS09025 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09030 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat THIMO_RS09030 IPR002372 Pyrrolo-quinoline quinone repeat THIMO_RS09030 IPR017687 Outer membrane protein assembly factor BamB THIMO_RS09030 IPR015943 WD40/YVTN repeat-like-containing domain superfamily THIMO_RS09030 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily THIMO_RS09035 IPR018704 Tetratricopeptide repeat-like domain THIMO_RS09035 IPR026039 Uncharacterised protein family UPF0070 THIMO_RS09035 IPR011990 Tetratricopeptide-like helical domain superfamily THIMO_RS09040 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain THIMO_RS09040 IPR015807 Histidine-tRNA ligase THIMO_RS09040 IPR006195 Aminoacyl-tRNA synthetase, class II THIMO_RS09040 IPR033656 Histidyl-anticodon-binding THIMO_RS09040 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit THIMO_RS09040 IPR036621 Anticodon-binding domain superfamily THIMO_RS09040 IPR004154 Anticodon-binding THIMO_RS09045 IPR001387 Cro/C1-type helix-turn-helix domain THIMO_RS09045 IPR023690 Cytoskeleton protein RodZ THIMO_RS09045 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THIMO_RS09045 IPR025194 Domain of unknown function DUF4115 THIMO_RS09055 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr THIMO_RS09055 IPR007197 Radical SAM THIMO_RS09055 IPR027492 Dual-specificity RNA methyltransferase RlmN THIMO_RS09055 IPR040072 Methyltransferase (Class A) THIMO_RS09055 IPR013785 Aldolase-type TIM barrel THIMO_RS09060 IPR034907 Nucleoside diphosphate kinase-like domain THIMO_RS09060 IPR036850 Nucleoside diphosphate kinase-like domain superfamily THIMO_RS09060 IPR001564 Nucleoside diphosphate kinase THIMO_RS09060 IPR023005 Nucleoside diphosphate kinase, active site THIMO_RS09065 IPR005490 L,D-transpeptidase catalytic domain THIMO_RS09065 IPR038063 L,D-transpeptidase catalytic domain-like THIMO_RS09070 IPR036974 PUA domain superfamily THIMO_RS09070 IPR015947 PUA-like superfamily THIMO_RS09070 IPR023542 rRNA large subunit methyltransferase I THIMO_RS09070 IPR041532 RlmI, PUA-like domain THIMO_RS09070 IPR019614 S-adenosylmethionine-dependent methyltransferase THIMO_RS09070 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS09070 IPR002478 PUA domain THIMO_RS09085 IPR018099 Purine phosphorylase, family 2, conserved site THIMO_RS09085 IPR035994 Nucleoside phosphorylase superfamily THIMO_RS09085 IPR000845 Nucleoside phosphorylase domain THIMO_RS09085 IPR010044 Methylthioadenosine phosphorylase (MTAP) THIMO_RS09135 IPR013430 Toxin-antitoxin system, antidote protein, HigA THIMO_RS09135 IPR001387 Cro/C1-type helix-turn-helix domain THIMO_RS09135 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THIMO_RS09150 IPR023408 Mechanosensitive ion channel MscS domain superfamily THIMO_RS09150 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 THIMO_RS09150 IPR010920 LSM domain superfamily THIMO_RS09150 IPR006685 Mechanosensitive ion channel MscS THIMO_RS09150 IPR006686 Mechanosensitive ion channel MscS, conserved site THIMO_RS09150 IPR011066 Mechanosensitive ion channel MscS, C-terminal THIMO_RS09160 IPR011833 Glycogen/starch/alpha-glucan phosphorylase THIMO_RS09160 IPR035090 Phosphorylase pyridoxal-phosphate attachment site THIMO_RS09160 IPR000811 Glycosyl transferase, family 35 THIMO_RS09165 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal THIMO_RS09165 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site THIMO_RS09165 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal THIMO_RS09165 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site THIMO_RS09165 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THIMO_RS09165 IPR023962 Probable phosphoketolase THIMO_RS09165 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase THIMO_RS09165 IPR029061 Thiamin diphosphate-binding fold THIMO_RS09175 IPR036318 FAD-binding, type PCMH-like superfamily THIMO_RS09175 IPR016164 FAD-linked oxidase-like, C-terminal THIMO_RS09175 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 THIMO_RS09175 IPR004113 FAD-linked oxidase, C-terminal THIMO_RS09175 IPR006094 FAD linked oxidase, N-terminal THIMO_RS09175 IPR004490 Glycolate oxidase subunit GlcD THIMO_RS09175 IPR016166 FAD-binding domain, PCMH-type THIMO_RS09180 IPR006094 FAD linked oxidase, N-terminal THIMO_RS09180 IPR016164 FAD-linked oxidase-like, C-terminal THIMO_RS09180 IPR016169 FAD-binding, type PCMH, subdomain 2 THIMO_RS09180 IPR036318 FAD-binding, type PCMH-like superfamily THIMO_RS09180 IPR016166 FAD-binding domain, PCMH-type THIMO_RS09185 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS09185 IPR004017 Cysteine-rich domain THIMO_RS09185 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS09185 IPR012257 Glycolate oxidase, iron-sulphur subunit THIMO_RS09185 IPR009051 Alpha-helical ferredoxin THIMO_RS09190 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS09190 IPR028622 ATP-dependent RNA helicase RhlE THIMO_RS09190 IPR001650 Helicase, C-terminal THIMO_RS09190 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09190 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site THIMO_RS09190 IPR014014 RNA helicase, DEAD-box type, Q motif THIMO_RS09190 IPR011545 DEAD/DEAH box helicase domain THIMO_RS09195 IPR035979 RNA-binding domain superfamily THIMO_RS09195 IPR000504 RNA recognition motif domain THIMO_RS09195 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily THIMO_RS09200 IPR006195 Aminoacyl-tRNA synthetase, class II THIMO_RS09200 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) THIMO_RS09200 IPR036621 Anticodon-binding domain superfamily THIMO_RS09200 IPR002316 Proline-tRNA ligase, class IIa THIMO_RS09200 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type THIMO_RS09200 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 THIMO_RS09200 IPR033730 Prokaryote proline-tRNA ligase core domain THIMO_RS09200 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily THIMO_RS09200 IPR004154 Anticodon-binding THIMO_RS09200 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain THIMO_RS09205 IPR029069 HotDog domain superfamily THIMO_RS09205 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ THIMO_RS09205 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA THIMO_RS09210 IPR005170 Transporter-associated domain THIMO_RS09210 IPR000644 CBS domain THIMO_RS09210 IPR002550 CNNM, transmembrane domain THIMO_RS09210 IPR036318 FAD-binding, type PCMH-like superfamily THIMO_RS09210 IPR016169 FAD-binding, type PCMH, subdomain 2 THIMO_RS09225 IPR008526 Inner membrane protein YedI THIMO_RS09230 IPR001905 Ammonium transporter THIMO_RS09230 IPR029020 Ammonium/urea transporter THIMO_RS09230 IPR018047 Ammonium transporter, conserved site THIMO_RS09230 IPR024041 Ammonium transporter AmtB-like domain THIMO_RS09235 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THIMO_RS09235 IPR001036 Acriflavin resistance protein THIMO_RS09240 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THIMO_RS09240 IPR006143 RND efflux pump, membrane fusion protein THIMO_RS09245 IPR042112 Phosphate acetyltransferase, domain 2 THIMO_RS09245 IPR042113 Phosphate acetyltransferase, domain 1 THIMO_RS09245 IPR004614 Phosphate acetyltransferase THIMO_RS09245 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09245 IPR002505 Phosphate acetyl/butaryl transferase THIMO_RS09245 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily THIMO_RS09245 IPR016475 Phosphate acetyltransferase, bacteria THIMO_RS09245 IPR010766 DRTGG THIMO_RS09250 IPR023865 Aliphatic acid kinase, short-chain, conserved site THIMO_RS09250 IPR004372 Acetate/propionate kinase THIMO_RS09250 IPR000890 Aliphatic acid kinase, short-chain THIMO_RS09260 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS09260 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS09260 IPR000192 Aminotransferase class V domain THIMO_RS09260 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THIMO_RS09260 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS09275 IPR017814 Mycothiol biosynthesis protein, MshA THIMO_RS09275 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THIMO_RS09275 IPR001296 Glycosyl transferase, family 1 THIMO_RS09280 IPR022835 Chaperone modulatory protein CbpM THIMO_RS09285 IPR008971 HSP40/DnaJ peptide-binding THIMO_RS09285 IPR018253 DnaJ domain, conserved site THIMO_RS09285 IPR002939 Chaperone DnaJ, C-terminal THIMO_RS09285 IPR001623 DnaJ domain THIMO_RS09285 IPR023859 DNA-binding protein, curved-DNA THIMO_RS09285 IPR036869 Chaperone J-domain superfamily THIMO_RS09290 IPR003593 AAA+ ATPase domain THIMO_RS09290 IPR041569 AAA ATPase, AAA+ lid domain THIMO_RS09290 IPR003959 ATPase, AAA-type, core THIMO_RS09290 IPR003960 ATPase, AAA-type, conserved site THIMO_RS09290 IPR005936 Peptidase, FtsH THIMO_RS09290 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09290 IPR011546 Peptidase M41, FtsH extracellular THIMO_RS09290 IPR000642 Peptidase M41 THIMO_RS09290 IPR037219 Peptidase M41-like THIMO_RS09300 IPR002201 Glycosyl transferase, family 9 THIMO_RS09300 IPR011908 Lipopolysaccharide heptosyltransferase I THIMO_RS09305 IPR001296 Glycosyl transferase, family 1 THIMO_RS09305 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THIMO_RS09305 IPR011875 Alpha-maltose-1-phosphate synthase THIMO_RS09310 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily THIMO_RS09310 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal THIMO_RS09310 IPR039901 3-deoxy-D-manno-octulosonic acid transferase THIMO_RS09320 IPR002650 Sulphate adenylyltransferase THIMO_RS09320 IPR024951 Sulphate adenylyltransferase catalytic domain THIMO_RS09320 IPR020792 Sulphate adenylyltransferase, prokaryotic-type THIMO_RS09320 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS09320 IPR015947 PUA-like superfamily THIMO_RS09320 IPR025980 ATP-sulfurylase PUA-like domain THIMO_RS09335 IPR008258 Transglycosylase SLT domain 1 THIMO_RS09335 IPR000189 Prokaryotic transglycosylase, active site THIMO_RS09335 IPR023346 Lysozyme-like domain superfamily THIMO_RS09340 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily THIMO_RS09340 IPR006311 Twin-arginine translocation pathway, signal sequence THIMO_RS09340 IPR010275 Protein of unknown function DUF882 THIMO_RS09345 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS09345 IPR001900 Ribonuclease II/R THIMO_RS09350 IPR023758 tRNA-modifying protein YgfZ THIMO_RS09350 IPR017703 YgfZ/GcvT conserved site THIMO_RS09350 IPR006222 Aminomethyltransferase, folate-binding domain THIMO_RS09350 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal THIMO_RS09355 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type THIMO_RS09355 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS09355 IPR002313 Lysine-tRNA ligase, class II THIMO_RS09355 IPR006195 Aminoacyl-tRNA synthetase, class II THIMO_RS09355 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) THIMO_RS09355 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal THIMO_RS09360 IPR000352 Peptide chain release factor class I THIMO_RS09360 IPR004374 Peptide chain release factor 2 THIMO_RS09360 IPR005139 Peptide chain release factor THIMO_RS09365 IPR011125 Zinc finger, HypF-type THIMO_RS09365 IPR006070 YrdC-like domain THIMO_RS09365 IPR041440 HypF, Kae1-like domain THIMO_RS09365 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily THIMO_RS09365 IPR004421 Carbamoyltransferase, HypF-type THIMO_RS09365 IPR017968 Acylphosphatase, conserved site THIMO_RS09365 IPR036046 Acylphosphatase-like domain superfamily THIMO_RS09365 IPR001792 Acylphosphatase-like domain THIMO_RS09370 IPR000594 THIF-type NAD/FAD binding fold THIMO_RS09370 IPR035985 Ubiquitin-activating enzyme THIMO_RS09375 IPR001130 TatD family THIMO_RS09375 IPR032466 Metal-dependent hydrolase THIMO_RS09375 IPR018228 Deoxyribonuclease, TatD-related, conserved site THIMO_RS09375 IPR015991 Uncharacterised hydrolase TatD-type THIMO_RS09385 IPR018636 Protein of unknown function DUF2058 THIMO_RS09400 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THIMO_RS09400 IPR001279 Metallo-beta-lactamase THIMO_RS09410 IPR006016 UspA THIMO_RS09410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS09410 IPR006015 Universal stress protein A family THIMO_RS09415 IPR011054 Rudiment single hybrid motif THIMO_RS09415 IPR016185 Pre-ATP-grasp domain superfamily THIMO_RS09415 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain THIMO_RS09415 IPR005482 Biotin carboxylase, C-terminal THIMO_RS09415 IPR011764 Biotin carboxylation domain THIMO_RS09415 IPR005481 Biotin carboxylase-like, N-terminal domain THIMO_RS09415 IPR011761 ATP-grasp fold THIMO_RS09415 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase THIMO_RS09420 IPR005776 Oxaloacetate decarboxylase, alpha subunit THIMO_RS09420 IPR011053 Single hybrid motif THIMO_RS09420 IPR003379 Carboxylase, conserved domain THIMO_RS09420 IPR000089 Biotin/lipoyl attachment THIMO_RS09420 IPR001882 Biotin-binding site THIMO_RS09420 IPR000891 Pyruvate carboxyltransferase THIMO_RS09420 IPR013785 Aldolase-type TIM barrel THIMO_RS09430 IPR036873 Rhodanese-like domain superfamily THIMO_RS09430 IPR021309 Protein of unknown function DUF2892 THIMO_RS09430 IPR001763 Rhodanese-like domain THIMO_RS09440 IPR003010 Carbon-nitrogen hydrolase THIMO_RS09440 IPR001110 Uncharacterised protein family UPF0012, conserved site THIMO_RS09440 IPR036526 Carbon-nitrogen hydrolase superfamily THIMO_RS09445 IPR022920 Disulphide bond formation protein DsbB THIMO_RS09445 IPR003752 Disulphide bond formation protein DsbB/BdbC THIMO_RS09445 IPR023380 DsbB-like superfamily THIMO_RS09450 IPR000189 Prokaryotic transglycosylase, active site THIMO_RS09450 IPR008258 Transglycosylase SLT domain 1 THIMO_RS09450 IPR010090 Phage tail tape measure protein THIMO_RS09450 IPR016047 Peptidase M23 THIMO_RS09450 IPR023346 Lysozyme-like domain superfamily THIMO_RS09450 IPR011055 Duplicated hybrid motif THIMO_RS09455 IPR006183 6-phosphogluconate dehydrogenase THIMO_RS09455 IPR036291 NAD(P)-binding domain superfamily THIMO_RS09455 IPR006184 6-phosphogluconate-binding site THIMO_RS09455 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding THIMO_RS09455 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating THIMO_RS09455 IPR006114 6-phosphogluconate dehydrogenase, C-terminal THIMO_RS09455 IPR013328 6-phosphogluconate dehydrogenase, domain 2 THIMO_RS09455 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THIMO_RS09460 IPR001296 Glycosyl transferase, family 1 THIMO_RS09460 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain THIMO_RS09475 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 THIMO_RS09475 IPR001036 Acriflavin resistance protein THIMO_RS09475 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THIMO_RS09480 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THIMO_RS09480 IPR006143 RND efflux pump, membrane fusion protein THIMO_RS09500 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09500 IPR029464 Type I restriction enzyme R protein, N-terminal domain THIMO_RS09500 IPR001650 Helicase, C-terminal THIMO_RS09500 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS09500 IPR013670 EcoEI R protein C-terminal domain THIMO_RS09500 IPR006935 Helicase/UvrB, N-terminal THIMO_RS09505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS09505 IPR003356 DNA methylase, adenine-specific THIMO_RS09505 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily THIMO_RS09505 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain THIMO_RS09505 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THIMO_RS09530 IPR000055 Restriction endonuclease, type I, HsdS THIMO_RS09545 IPR003593 AAA+ ATPase domain THIMO_RS09545 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09545 IPR015854 ABC transporter, lipoprotein release, LolD THIMO_RS09545 IPR017871 ABC transporter, conserved site THIMO_RS09545 IPR003439 ABC transporter-like THIMO_RS09550 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09550 IPR003495 CobW/HypB/UreG, nucleotide-binding domain THIMO_RS09550 IPR004400 Urease accessory protein UreG THIMO_RS09560 IPR005980 Nitrogenase cofactor biosynthesis protein NifB THIMO_RS09560 IPR007197 Radical SAM THIMO_RS09560 IPR013785 Aldolase-type TIM barrel THIMO_RS09560 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site THIMO_RS09560 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THIMO_RS09560 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis THIMO_RS09560 IPR034165 FeMo cofactor biosynthesis protein NifB, C-terminal THIMO_RS09565 IPR036707 Cell division topological specificity factor MinE superfamily THIMO_RS09565 IPR005527 Cell division topological specificity factor MinE THIMO_RS09570 IPR010223 ATP binding protein MinD, bacterial-type THIMO_RS09570 IPR025501 ATP binding protein MinD THIMO_RS09570 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain THIMO_RS09570 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09575 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily THIMO_RS09575 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal THIMO_RS09575 IPR005526 Septum formation inhibitor MinC, C-terminal THIMO_RS09575 IPR013033 Septum formation inhibitor MinC THIMO_RS09575 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily THIMO_RS09575 IPR007874 Septum formation inhibitor MinC, N-terminal THIMO_RS09580 IPR036265 HIT-like superfamily THIMO_RS09580 IPR001310 Histidine triad (HIT) protein THIMO_RS09580 IPR011146 HIT-like domain THIMO_RS09580 IPR019808 Histidine triad, conserved site THIMO_RS09585 IPR015967 Recombination protein RecR, conserved site THIMO_RS09585 IPR006171 TOPRIM domain THIMO_RS09585 IPR034137 RecR, TOPRIM domain THIMO_RS09585 IPR023627 Recombination protein RecR THIMO_RS09585 IPR000093 DNA recombination protein RecR THIMO_RS09585 IPR023628 Recombination protein RecR, C4-type zinc finger THIMO_RS09590 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily THIMO_RS09590 IPR004401 Nucleoid-associated protein YbaB/EbfC family THIMO_RS09595 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV THIMO_RS09595 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily THIMO_RS09595 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09595 IPR021029 DNA polymerase III, tau subunit, domain V THIMO_RS09595 IPR003593 AAA+ ATPase domain THIMO_RS09595 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal THIMO_RS09595 IPR001270 ClpA/B family THIMO_RS09595 IPR022754 DNA polymerase III, gamma subunit, domain III THIMO_RS09595 IPR012763 DNA polymerase III, subunit gamma/ tau THIMO_RS09600 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain THIMO_RS09600 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily THIMO_RS09600 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal THIMO_RS09600 IPR005288 L-aspartate oxidase THIMO_RS09600 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily THIMO_RS09600 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS09605 IPR017871 ABC transporter, conserved site THIMO_RS09605 IPR003593 AAA+ ATPase domain THIMO_RS09605 IPR003439 ABC transporter-like THIMO_RS09605 IPR022374 Energy-dependent translational throttle protein EttA THIMO_RS09605 IPR032781 ABC-transporter extension domain THIMO_RS09605 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09610 IPR013656 PAS fold-4 THIMO_RS09610 IPR035965 PAS domain superfamily THIMO_RS09610 IPR000014 PAS domain THIMO_RS09610 IPR029787 Nucleotide cyclase THIMO_RS09610 IPR001633 EAL domain THIMO_RS09610 IPR035919 EAL domain superfamily THIMO_RS09610 IPR000160 GGDEF domain THIMO_RS09625 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09625 IPR002477 Peptidoglycan binding-like THIMO_RS09625 IPR036365 PGBD-like superfamily THIMO_RS09625 IPR036366 PGBD superfamily THIMO_RS09625 IPR003593 AAA+ ATPase domain THIMO_RS09630 IPR025286 MOFRL-associated domain THIMO_RS09630 IPR007835 MOFRL domain THIMO_RS09630 IPR039760 MOFRL domain-containing protein THIMO_RS09630 IPR038614 Glycerate kinase, N-terminal domain superfamily THIMO_RS09630 IPR037035 Glycerate kinase-like, C-terminal domain superfamily THIMO_RS09645 IPR002549 Transmembrane protein TqsA-like THIMO_RS09650 IPR001633 EAL domain THIMO_RS09650 IPR000160 GGDEF domain THIMO_RS09650 IPR000014 PAS domain THIMO_RS09650 IPR035965 PAS domain superfamily THIMO_RS09650 IPR035919 EAL domain superfamily THIMO_RS09650 IPR029787 Nucleotide cyclase THIMO_RS09650 IPR013656 PAS fold-4 THIMO_RS09655 IPR036264 Bacterial exopeptidase dimerisation domain THIMO_RS09655 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site THIMO_RS09655 IPR002933 Peptidase M20 THIMO_RS09655 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria THIMO_RS09655 IPR011650 Peptidase M20, dimerisation domain THIMO_RS09660 IPR007527 Zinc finger, SWIM-type THIMO_RS09665 IPR001650 Helicase, C-terminal THIMO_RS09665 IPR022138 Helicase SWF/SNF-related THIMO_RS09665 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS09665 IPR038718 SNF2-like, N-terminal domain superfamily THIMO_RS09665 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09665 IPR000330 SNF2-related, N-terminal domain THIMO_RS09680 IPR002559 Transposase, IS4-like THIMO_RS09680 IPR008490 Transposase InsH, N-terminal THIMO_RS09690 IPR004839 Aminotransferase, class I/classII THIMO_RS09690 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS09690 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS09690 IPR000524 Transcription regulator HTH, GntR THIMO_RS09690 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS09690 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS09690 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS09695 IPR014369 Glycine/Sarcosine N-methyltransferase THIMO_RS09695 IPR041698 Methyltransferase domain 25 THIMO_RS09695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS09700 IPR012337 Ribonuclease H-like superfamily THIMO_RS09700 IPR001584 Integrase, catalytic core THIMO_RS09700 IPR025948 HTH-like domain THIMO_RS09700 IPR036397 Ribonuclease H superfamily THIMO_RS09705 IPR009057 Homeobox-like domain superfamily THIMO_RS09705 IPR002514 Transposase IS3/IS911family THIMO_RS09705 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS09710 IPR036397 Ribonuclease H superfamily THIMO_RS09710 IPR001584 Integrase, catalytic core THIMO_RS09710 IPR025948 HTH-like domain THIMO_RS09710 IPR012337 Ribonuclease H-like superfamily THIMO_RS09720 IPR032806 H repeat-associated protein, N-terminal THIMO_RS09720 IPR002559 Transposase, IS4-like THIMO_RS09725 IPR032806 H repeat-associated protein, N-terminal THIMO_RS09725 IPR002559 Transposase, IS4-like THIMO_RS09740 IPR007457 Fe(II) trafficking protein YggX THIMO_RS09740 IPR036766 Fe(II) trafficking protein YggX superfamily THIMO_RS09745 IPR004036 Endonuclease III-like, conserved site-2 THIMO_RS09745 IPR000445 Helix-hairpin-helix motif THIMO_RS09745 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal THIMO_RS09745 IPR011257 DNA glycosylase THIMO_RS09745 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif THIMO_RS09745 IPR029119 MutY, C-terminal THIMO_RS09745 IPR004035 Endonuclease III, iron-sulphur binding site THIMO_RS09745 IPR003265 HhH-GPD domain THIMO_RS09745 IPR015797 NUDIX hydrolase-like domain superfamily THIMO_RS09745 IPR005760 A/G-specific adenine glycosylase MutY THIMO_RS09760 IPR000873 AMP-dependent synthetase/ligase THIMO_RS09760 IPR020845 AMP-binding, conserved site THIMO_RS09760 IPR042099 AMP-dependent synthetase-like superfamily THIMO_RS09765 IPR033983 Thiazole synthase ThiG THIMO_RS09765 IPR003749 Sulfur carrier ThiS/MoaD-like THIMO_RS09765 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THIMO_RS09765 IPR012675 Beta-grasp domain superfamily THIMO_RS09765 IPR008867 Thiazole synthase THIMO_RS09765 IPR010035 ThiS, thiamine-biosynthesis THIMO_RS09765 IPR013785 Aldolase-type TIM barrel THIMO_RS09770 IPR013785 Aldolase-type TIM barrel THIMO_RS09770 IPR033983 Thiazole synthase ThiG THIMO_RS09770 IPR008867 Thiazole synthase THIMO_RS09775 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type THIMO_RS09775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS09780 IPR013611 Transport-associated OB, type 2 THIMO_RS09780 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09780 IPR015853 ABC transporter, ferric cation import, FbpC THIMO_RS09780 IPR003439 ABC transporter-like THIMO_RS09780 IPR003593 AAA+ ATPase domain THIMO_RS09780 IPR017871 ABC transporter, conserved site THIMO_RS09780 IPR008995 Molybdate/tungstate binding, C-terminal THIMO_RS09785 IPR005226 UPF0014 family THIMO_RS09790 IPR032882 SrkA/RdoA protein kinase THIMO_RS09790 IPR002575 Aminoglycoside phosphotransferase THIMO_RS09790 IPR011009 Protein kinase-like domain superfamily THIMO_RS09805 IPR002024 Bacterioferritin THIMO_RS09805 IPR012347 Ferritin-like THIMO_RS09805 IPR009040 Ferritin-like diiron domain THIMO_RS09805 IPR009078 Ferritin-like superfamily THIMO_RS09805 IPR008331 Ferritin/DPS protein domain THIMO_RS09810 IPR009040 Ferritin-like diiron domain THIMO_RS09810 IPR002024 Bacterioferritin THIMO_RS09810 IPR009078 Ferritin-like superfamily THIMO_RS09810 IPR012347 Ferritin-like THIMO_RS09810 IPR008331 Ferritin/DPS protein domain THIMO_RS09835 IPR022824 Multidrug resistance protein MdtA THIMO_RS09835 IPR006143 RND efflux pump, membrane fusion protein THIMO_RS09835 IPR039562 Membrane fusion protein, biotin-lipoyl like domain THIMO_RS09840 IPR001036 Acriflavin resistance protein THIMO_RS09840 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THIMO_RS09840 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 THIMO_RS09845 IPR022924 Cardiolipin synthase THIMO_RS09845 IPR025202 Phospholipase D-like domain THIMO_RS09845 IPR027379 Cardiolipin synthase N-terminal THIMO_RS09845 IPR001736 Phospholipase D/Transphosphatidylase THIMO_RS09845 IPR030840 Cardiolipin synthase A THIMO_RS09850 IPR022962 Soluble pyridine nucleotide transhydrogenase THIMO_RS09850 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS09850 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THIMO_RS09850 IPR023753 FAD/NAD(P)-binding domain THIMO_RS09850 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I THIMO_RS09850 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily THIMO_RS09875 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS09875 IPR011006 CheY-like superfamily THIMO_RS09875 IPR039420 Transcriptional regulatory protein WalR-like THIMO_RS09875 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS09875 IPR001867 OmpR/PhoB-type DNA-binding domain THIMO_RS09875 IPR016032 Signal transduction response regulator, C-terminal effector THIMO_RS09880 IPR005467 Histidine kinase domain THIMO_RS09880 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS09880 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS09880 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS09880 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS09880 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS09880 IPR029151 Periplasmic sensor-like domain superfamily THIMO_RS09880 IPR003660 HAMP domain THIMO_RS09885 IPR010364 Uncharacterised protein family, inner membrane CreD THIMO_RS09910 IPR035906 MetI-like superfamily THIMO_RS09910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS09915 IPR035906 MetI-like superfamily THIMO_RS09915 IPR014157 Nickel ABC transporter, permease subunit NikC THIMO_RS09915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS09920 IPR017853 Glycoside hydrolase superfamily THIMO_RS09920 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily THIMO_RS09920 IPR001764 Glycoside hydrolase, family 3, N-terminal THIMO_RS09920 IPR022956 Beta-hexosaminidase, bacterial THIMO_RS09925 IPR005904 Hypoxanthine phosphoribosyl transferase THIMO_RS09925 IPR000836 Phosphoribosyltransferase domain THIMO_RS09925 IPR029057 Phosphoribosyltransferase-like THIMO_RS09940 IPR003374 ApbE-like superfamily THIMO_RS09940 IPR042159 Flavin-trafficking protein ApbE THIMO_RS09940 IPR024932 Flavin transferase ApbE THIMO_RS09945 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F THIMO_RS09945 IPR006145 Pseudouridine synthase, RsuA/RluA THIMO_RS09945 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain THIMO_RS09945 IPR036986 RNA-binding S4 domain superfamily THIMO_RS09945 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site THIMO_RS09945 IPR002942 RNA-binding S4 domain THIMO_RS09945 IPR020103 Pseudouridine synthase, catalytic domain superfamily THIMO_RS09950 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS09950 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial THIMO_RS09950 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 THIMO_RS09950 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding THIMO_RS09950 IPR033910 Glutamyl-tRNA synthetase THIMO_RS09950 IPR000924 Glutamyl/glutaminyl-tRNA synthetase THIMO_RS09950 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain THIMO_RS09950 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THIMO_RS09960 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain THIMO_RS09960 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THIMO_RS09960 IPR004514 Glutamine-tRNA synthetase THIMO_RS09960 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily THIMO_RS09960 IPR000924 Glutamyl/glutaminyl-tRNA synthetase THIMO_RS09960 IPR022861 Glutamine-tRNA ligase, bacterial THIMO_RS09960 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain THIMO_RS09960 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily THIMO_RS09960 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal THIMO_RS09960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS09965 IPR011129 Cold shock domain THIMO_RS09965 IPR041703 Transcription termination factor Rho, ATP binding domain THIMO_RS09965 IPR004665 Transcription termination factor Rho THIMO_RS09965 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS09965 IPR011113 Rho termination factor, RNA-binding domain THIMO_RS09965 IPR011112 Rho termination factor, N-terminal THIMO_RS09965 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09965 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THIMO_RS09965 IPR003593 AAA+ ATPase domain THIMO_RS09965 IPR036269 Rho termination factor, N-terminal domain superfamily THIMO_RS09970 IPR013766 Thioredoxin domain THIMO_RS09970 IPR036249 Thioredoxin-like superfamily THIMO_RS09970 IPR005746 Thioredoxin THIMO_RS09975 IPR014014 RNA helicase, DEAD-box type, Q motif THIMO_RS09975 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS09975 IPR001650 Helicase, C-terminal THIMO_RS09975 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS09975 IPR011545 DEAD/DEAH box helicase domain THIMO_RS09975 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site THIMO_RS09975 IPR023554 ATP-dependent RNA helicase RhlB type THIMO_RS09980 IPR036412 HAD-like superfamily THIMO_RS09980 IPR006439 HAD hydrolase, subfamily IA THIMO_RS09980 IPR023214 HAD superfamily THIMO_RS09980 IPR041492 Haloacid dehalogenase-like hydrolase THIMO_RS09985 IPR000086 NUDIX hydrolase domain THIMO_RS09985 IPR020084 NUDIX hydrolase, conserved site THIMO_RS09985 IPR015797 NUDIX hydrolase-like domain superfamily THIMO_RS09990 IPR014743 Chloride channel, core THIMO_RS09990 IPR023861 Chloride channel, ClcA THIMO_RS09990 IPR001807 Chloride channel, voltage gated THIMO_RS10000 IPR013785 Aldolase-type TIM barrel THIMO_RS10000 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal THIMO_RS10010 IPR004368 Translation initiation factor IF-1 THIMO_RS10010 IPR022967 RNA-binding domain, S1 THIMO_RS10010 IPR006196 RNA-binding domain, S1, IF1 type THIMO_RS10010 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS10015 IPR003959 ATPase, AAA-type, core THIMO_RS10015 IPR003593 AAA+ ATPase domain THIMO_RS10015 IPR019489 Clp ATPase, C-terminal THIMO_RS10015 IPR036628 Clp, N-terminal domain superfamily THIMO_RS10015 IPR004176 Clp, N-terminal THIMO_RS10015 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA THIMO_RS10015 IPR001270 ClpA/B family THIMO_RS10015 IPR018368 ClpA/B, conserved site 1 THIMO_RS10015 IPR028299 ClpA/B, conserved site 2 THIMO_RS10015 IPR041546 ClpA/ClpB, AAA lid domain THIMO_RS10015 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10020 IPR003769 Adaptor protein ClpS, core THIMO_RS10020 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like THIMO_RS10020 IPR022935 ATP-dependent Clp protease adaptor protein ClpS THIMO_RS10025 IPR012156 Cold shock, CspA THIMO_RS10025 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS10025 IPR011129 Cold shock domain THIMO_RS10025 IPR019844 Cold-shock (CSD) domain THIMO_RS10025 IPR002059 Cold-shock protein, DNA-binding THIMO_RS10030 IPR004506 tRNA-specific 2-thiouridylase THIMO_RS10030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS10030 IPR023382 Adenine nucleotide alpha hydrolase-like domains THIMO_RS10035 IPR035932 HflD-like superfamily THIMO_RS10035 IPR007451 High frequency lysogenization protein HflD THIMO_RS10045 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB THIMO_RS10045 IPR000905 Gcp-like domain THIMO_RS10050 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type THIMO_RS10050 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10050 IPR006555 ATP-dependent helicase, C-terminal THIMO_RS10050 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS10050 IPR010614 DEAD2 THIMO_RS10050 IPR001650 Helicase, C-terminal THIMO_RS10060 IPR028166 Bifunctional transglycosylase second domain THIMO_RS10060 IPR036950 Penicillin binding protein transglycosylase domain THIMO_RS10060 IPR011813 Penicillin-binding protein 1B THIMO_RS10060 IPR001460 Penicillin-binding protein, transpeptidase THIMO_RS10060 IPR023346 Lysozyme-like domain superfamily THIMO_RS10060 IPR001264 Glycosyl transferase, family 51 THIMO_RS10060 IPR012338 Beta-lactamase/transpeptidase-like THIMO_RS10065 IPR000412 ABC-2 transporter THIMO_RS10065 IPR013525 ABC-2 type transporter THIMO_RS10070 IPR017871 ABC transporter, conserved site THIMO_RS10070 IPR003593 AAA+ ATPase domain THIMO_RS10070 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10070 IPR003439 ABC transporter-like THIMO_RS10095 IPR007861 DNA mismatch repair protein MutS, clamp THIMO_RS10095 IPR000432 DNA mismatch repair protein MutS, C-terminal THIMO_RS10095 IPR007696 DNA mismatch repair protein MutS, core THIMO_RS10095 IPR016151 DNA mismatch repair protein MutS, N-terminal THIMO_RS10095 IPR036187 DNA mismatch repair protein MutS, core domain superfamily THIMO_RS10095 IPR007860 DNA mismatch repair protein MutS, connector domain THIMO_RS10095 IPR017261 DNA mismatch repair protein MutS/MSH THIMO_RS10095 IPR036678 MutS, connector domain superfamily THIMO_RS10095 IPR007695 DNA mismatch repair protein MutS-like, N-terminal THIMO_RS10095 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10095 IPR005748 DNA mismatch repair protein MutS THIMO_RS10100 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC THIMO_RS10100 IPR013216 Methyltransferase type 11 THIMO_RS10100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS10100 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS10100 IPR029058 Alpha/Beta hydrolase fold THIMO_RS10105 IPR001926 Pyridoxal-phosphate dependent enzyme THIMO_RS10105 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THIMO_RS10105 IPR006316 Tryptophan synthase, beta chain-like THIMO_RS10105 IPR006653 Tryptophan synthase, beta chain, conserved site THIMO_RS10105 IPR006654 Tryptophan synthase, beta chain THIMO_RS10105 IPR023026 Tryptophan synthase beta chain/beta chain-like THIMO_RS10110 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding THIMO_RS10110 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS10110 IPR006319 Phosphoenolpyruvate synthase THIMO_RS10110 IPR036637 Phosphohistidine domain superfamily THIMO_RS10110 IPR040442 Pyruvate kinase-like domain superfamily THIMO_RS10110 IPR008279 PEP-utilising enzyme, mobile domain THIMO_RS10110 IPR000121 PEP-utilising enzyme, C-terminal THIMO_RS10110 IPR018274 PEP-utilising enzyme, active site THIMO_RS10110 IPR023151 PEP-utilising enzyme, conserved site THIMO_RS10110 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THIMO_RS10125 IPR011006 CheY-like superfamily THIMO_RS10125 IPR001867 OmpR/PhoB-type DNA-binding domain THIMO_RS10125 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS10125 IPR016032 Signal transduction response regulator, C-terminal effector THIMO_RS10125 IPR039420 Transcriptional regulatory protein WalR-like THIMO_RS10125 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS10145 IPR011737 Conserved hypothetical protein CHP02206, TP0381 THIMO_RS10170 IPR010292 Uncharacterised protein family CreA THIMO_RS10190 IPR038649 Exonuclease I, SH3-like domain superfamily THIMO_RS10190 IPR013620 Exodeoxyribonuclease I, C-terminal THIMO_RS10190 IPR013520 Exonuclease, RNase T/DNA polymerase III THIMO_RS10190 IPR012337 Ribonuclease H-like superfamily THIMO_RS10190 IPR034747 Exonuclease I, SH3-like domain THIMO_RS10190 IPR034748 Exonuclease I, C-terminal alpha-helical domain THIMO_RS10190 IPR023607 Exodeoxyribonuclease I THIMO_RS10190 IPR036397 Ribonuclease H superfamily THIMO_RS10195 IPR038657 Ribosomal protein L19 superfamily THIMO_RS10195 IPR001857 Ribosomal protein L19 THIMO_RS10195 IPR018257 Ribosomal protein L19, conserved site THIMO_RS10195 IPR008991 Translation protein SH3-like domain superfamily THIMO_RS10200 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria THIMO_RS10200 IPR029028 Alpha/beta knot methyltransferases THIMO_RS10200 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal THIMO_RS10200 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THIMO_RS10200 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain THIMO_RS10205 IPR009000 Translation protein, beta-barrel domain superfamily THIMO_RS10205 IPR011961 16S rRNA processing protein RimM THIMO_RS10205 IPR036976 RimM, N-terminal domain superfamily THIMO_RS10205 IPR027275 PRC-barrel domain THIMO_RS10205 IPR011033 PRC-barrel-like superfamily THIMO_RS10205 IPR002676 RimM, N-terminal THIMO_RS10210 IPR000307 Ribosomal protein S16 THIMO_RS10210 IPR020592 Ribosomal protein S16, conserved site THIMO_RS10210 IPR023803 Ribosomal protein S16 domain superfamily THIMO_RS10215 IPR000644 CBS domain THIMO_RS10215 IPR006668 Magnesium transporter, MgtE intracellular domain THIMO_RS10215 IPR038076 MgtE, N-terminal domain superfamily THIMO_RS10215 IPR038048 Magnesium transporter MgtE, transmembrane domain THIMO_RS10215 IPR006669 Magnesium transporter MgtE THIMO_RS10215 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily THIMO_RS10215 IPR006667 SLC41 divalent cation transporters, integral membrane domain THIMO_RS10220 IPR014014 RNA helicase, DEAD-box type, Q motif THIMO_RS10220 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site THIMO_RS10220 IPR034415 CsdA, RNA recognition motif THIMO_RS10220 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10220 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain THIMO_RS10220 IPR028618 ATP-dependent RNA helicase DeaD THIMO_RS10220 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS10220 IPR001650 Helicase, C-terminal THIMO_RS10220 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily THIMO_RS10220 IPR011545 DEAD/DEAH box helicase domain THIMO_RS10225 IPR003791 Protein of unknown function UPF0178 THIMO_RS10230 IPR000170 High potential iron-sulphur protein THIMO_RS10230 IPR036369 High potential iron-sulphur protein superfamily THIMO_RS10260 IPR003593 AAA+ ATPase domain THIMO_RS10260 IPR017871 ABC transporter, conserved site THIMO_RS10260 IPR041102 UvrA, interaction domain THIMO_RS10260 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10260 IPR004602 UvrABC system subunit A THIMO_RS10260 IPR003439 ABC transporter-like THIMO_RS10260 IPR041552 UvrA DNA-binding domain THIMO_RS10275 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS10275 IPR013767 PAS fold THIMO_RS10275 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS10275 IPR005467 Histidine kinase domain THIMO_RS10275 IPR003660 HAMP domain THIMO_RS10275 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS10275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS10275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS10275 IPR029151 Periplasmic sensor-like domain superfamily THIMO_RS10275 IPR000014 PAS domain THIMO_RS10275 IPR035965 PAS domain superfamily THIMO_RS10275 IPR000700 PAS-associated, C-terminal THIMO_RS10280 IPR016032 Signal transduction response regulator, C-terminal effector THIMO_RS10280 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS10280 IPR001867 OmpR/PhoB-type DNA-binding domain THIMO_RS10280 IPR011006 CheY-like superfamily THIMO_RS10280 IPR039420 Transcriptional regulatory protein WalR-like THIMO_RS10280 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS10325 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal THIMO_RS10325 IPR017871 ABC transporter, conserved site THIMO_RS10325 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10325 IPR003593 AAA+ ATPase domain THIMO_RS10325 IPR003439 ABC transporter-like THIMO_RS10330 IPR017871 ABC transporter, conserved site THIMO_RS10330 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10330 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal THIMO_RS10330 IPR003439 ABC transporter-like THIMO_RS10330 IPR003593 AAA+ ATPase domain THIMO_RS10340 IPR035906 MetI-like superfamily THIMO_RS10340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS10350 IPR036513 STAS domain superfamily THIMO_RS10350 IPR001902 SLC26A/SulP transporter THIMO_RS10350 IPR002645 STAS domain THIMO_RS10350 IPR011547 SLC26A/SulP transporter domain THIMO_RS10355 IPR006665 OmpA-like domain THIMO_RS10355 IPR006664 Outer membrane protein, bacterial THIMO_RS10355 IPR036737 OmpA-like domain superfamily THIMO_RS10355 IPR039001 Peptidoglycan-associated lipoprotein THIMO_RS10355 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal THIMO_RS10355 IPR006690 Outer membrane protein, OmpA-like, conserved site THIMO_RS10360 IPR013509 Ribonucleotide reductase large subunit, N-terminal THIMO_RS10360 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent THIMO_RS10360 IPR000788 Ribonucleotide reductase large subunit, C-terminal THIMO_RS10360 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal THIMO_RS10360 IPR005144 ATP-cone domain THIMO_RS10370 IPR038377 Sodium/glucose symporter superfamily THIMO_RS10370 IPR011851 Sodium/proline symporter THIMO_RS10370 IPR001734 Sodium/solute symporter THIMO_RS10370 IPR018212 Sodium/solute symporter, conserved site THIMO_RS10375 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10375 IPR025944 Sigma-54 interaction domain, conserved site THIMO_RS10375 IPR011006 CheY-like superfamily THIMO_RS10375 IPR009057 Homeobox-like domain superfamily THIMO_RS10375 IPR003593 AAA+ ATPase domain THIMO_RS10375 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THIMO_RS10375 IPR002078 RNA polymerase sigma factor 54 interaction domain THIMO_RS10375 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS10375 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS10375 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THIMO_RS10380 IPR039421 Type I protein exporter THIMO_RS10380 IPR003593 AAA+ ATPase domain THIMO_RS10380 IPR011527 ABC transporter type 1, transmembrane domain THIMO_RS10380 IPR036640 ABC transporter type 1, transmembrane domain superfamily THIMO_RS10380 IPR003439 ABC transporter-like THIMO_RS10380 IPR017871 ABC transporter, conserved site THIMO_RS10380 IPR011917 ABC transporter, lipid A export, MsbA THIMO_RS10380 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10385 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal THIMO_RS10385 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily THIMO_RS10385 IPR012309 DNA ligase, ATP-dependent, C-terminal THIMO_RS10385 IPR012310 DNA ligase, ATP-dependent, central THIMO_RS10385 IPR016059 DNA ligase, ATP-dependent, conserved site THIMO_RS10385 IPR012308 DNA ligase, ATP-dependent, N-terminal THIMO_RS10385 IPR000977 DNA ligase, ATP-dependent THIMO_RS10385 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS10400 IPR000192 Aminotransferase class V domain THIMO_RS10400 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THIMO_RS10400 IPR010240 Cysteine desulfurase IscS THIMO_RS10400 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal THIMO_RS10400 IPR016454 Cysteine desulfurase THIMO_RS10400 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS10400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS10400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS10405 IPR014710 RmlC-like jelly roll fold THIMO_RS10405 IPR012318 Crp-type HTH domain THIMO_RS10405 IPR000595 Cyclic nucleotide-binding domain THIMO_RS10405 IPR018488 Cyclic nucleotide-binding, conserved site THIMO_RS10405 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS10405 IPR018490 Cyclic nucleotide-binding-like THIMO_RS10405 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS10410 IPR000771 Fructose-bisphosphate aldolase, class-II THIMO_RS10410 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype THIMO_RS10410 IPR013785 Aldolase-type TIM barrel THIMO_RS10415 IPR015795 Pyruvate kinase, C-terminal THIMO_RS10415 IPR036918 Pyruvate kinase, C-terminal domain superfamily THIMO_RS10415 IPR015806 Pyruvate kinase, insert domain superfamily THIMO_RS10415 IPR040442 Pyruvate kinase-like domain superfamily THIMO_RS10415 IPR011037 Pyruvate kinase-like, insert domain superfamily THIMO_RS10415 IPR015793 Pyruvate kinase, barrel THIMO_RS10415 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THIMO_RS10415 IPR001697 Pyruvate kinase THIMO_RS10415 IPR018209 Pyruvate kinase, active site THIMO_RS10420 IPR036043 Phosphoglycerate kinase superfamily THIMO_RS10420 IPR015824 Phosphoglycerate kinase, N-terminal THIMO_RS10420 IPR001576 Phosphoglycerate kinase THIMO_RS10420 IPR015911 Phosphoglycerate kinase, conserved site THIMO_RS10425 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family THIMO_RS10425 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain THIMO_RS10425 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site THIMO_RS10425 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain THIMO_RS10425 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I THIMO_RS10425 IPR036291 NAD(P)-binding domain superfamily THIMO_RS10430 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II THIMO_RS10430 IPR005475 Transketolase-like, pyrimidine-binding domain THIMO_RS10430 IPR005478 Transketolase, bacterial-like THIMO_RS10430 IPR033247 Transketolase family THIMO_RS10430 IPR020826 Transketolase binding site THIMO_RS10430 IPR005474 Transketolase, N-terminal THIMO_RS10430 IPR029061 Thiamin diphosphate-binding fold THIMO_RS10430 IPR033248 Transketolase, C-terminal domain THIMO_RS10440 IPR022636 S-adenosylmethionine synthetase superfamily THIMO_RS10440 IPR002133 S-adenosylmethionine synthetase THIMO_RS10440 IPR022629 S-adenosylmethionine synthetase, central domain THIMO_RS10440 IPR022630 S-adenosylmethionine synthetase, C-terminal THIMO_RS10440 IPR022631 S-adenosylmethionine synthetase, conserved site THIMO_RS10440 IPR022628 S-adenosylmethionine synthetase, N-terminal THIMO_RS10445 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site THIMO_RS10445 IPR036291 NAD(P)-binding domain superfamily THIMO_RS10445 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain THIMO_RS10445 IPR000043 Adenosylhomocysteinase-like THIMO_RS10445 IPR042172 Adenosylhomocysteinase-like superfamily THIMO_RS10450 IPR004620 5,10-methylenetetrahydrofolate reductase THIMO_RS10450 IPR003171 Methylenetetrahydrofolate reductase THIMO_RS10450 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase THIMO_RS10450 IPR029041 FAD-linked oxidoreductase-like THIMO_RS10455 IPR007370 Glutamate--cysteine ligase THIMO_RS10455 IPR006334 Glutamate--cysteine ligase, monofunctional THIMO_RS10455 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain THIMO_RS10460 IPR020992 Tail specific protease, C-terminal THIMO_RS10460 IPR029045 ClpP/crotonase-like domain superfamily THIMO_RS10460 IPR001478 PDZ domain THIMO_RS10460 IPR036034 PDZ superfamily THIMO_RS10460 IPR004447 C-terminal-processing peptidase S41A THIMO_RS10460 IPR040573 Tail specific protease, N-terminal domain THIMO_RS10460 IPR005151 Tail specific protease THIMO_RS10465 IPR036821 Peptide deformylase superfamily THIMO_RS10465 IPR023635 Peptide deformylase THIMO_RS10475 IPR003730 Multi-copper polyphenol oxidoreductase THIMO_RS10475 IPR011324 Cytotoxic necrotizing factor-like, catalytic THIMO_RS10475 IPR038371 Multi-copper polyphenol oxidoreductase superfamily THIMO_RS10480 IPR002942 RNA-binding S4 domain THIMO_RS10480 IPR006225 Pseudouridine synthase, RluC/RluD THIMO_RS10480 IPR020103 Pseudouridine synthase, catalytic domain superfamily THIMO_RS10480 IPR036986 RNA-binding S4 domain superfamily THIMO_RS10480 IPR006145 Pseudouridine synthase, RsuA/RluA THIMO_RS10480 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site THIMO_RS10485 IPR011990 Tetratricopeptide-like helical domain superfamily THIMO_RS10485 IPR039565 Outer membrane lipoprotein BamD-like THIMO_RS10485 IPR017689 Outer membrane protein assembly factor BamD THIMO_RS10490 IPR002187 Nitrogen regulatory protein PII THIMO_RS10490 IPR011322 Nitrogen regulatory PII-like, alpha/beta THIMO_RS10490 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal THIMO_RS10490 IPR017918 Nitrogen regulatory protein PII, conserved site THIMO_RS10490 IPR002332 Nitrogen regulatory protein P-II, urydylation site THIMO_RS10495 IPR000132 Nitrilase/cyanide hydratase, conserved site THIMO_RS10495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS10495 IPR022310 NAD/GMP synthase THIMO_RS10495 IPR014445 Glutamine-dependent NAD(+) synthetase THIMO_RS10495 IPR003010 Carbon-nitrogen hydrolase THIMO_RS10495 IPR036526 Carbon-nitrogen hydrolase superfamily THIMO_RS10495 IPR003694 NAD(+) synthetase THIMO_RS10500 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS10500 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS10500 IPR000014 PAS domain THIMO_RS10500 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS10500 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS10500 IPR005467 Histidine kinase domain THIMO_RS10500 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS10505 IPR011006 CheY-like superfamily THIMO_RS10505 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS10505 IPR002078 RNA polymerase sigma factor 54 interaction domain THIMO_RS10505 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10505 IPR003593 AAA+ ATPase domain THIMO_RS10505 IPR009057 Homeobox-like domain superfamily THIMO_RS10505 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THIMO_RS10505 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS10505 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THIMO_RS10505 IPR025944 Sigma-54 interaction domain, conserved site THIMO_RS10510 IPR033719 N-acetylglutamate synthase, kinase-like domain THIMO_RS10510 IPR010167 Amino-acid N-acetyltransferase THIMO_RS10510 IPR000182 GNAT domain THIMO_RS10510 IPR016181 Acyl-CoA N-acyltransferase THIMO_RS10510 IPR036393 Acetylglutamate kinase-like superfamily THIMO_RS10510 IPR001048 Aspartate/glutamate/uridylate kinase THIMO_RS10555 IPR018517 tRNA-dihydrouridine synthase, conserved site THIMO_RS10555 IPR001269 tRNA-dihydrouridine synthase THIMO_RS10555 IPR013785 Aldolase-type TIM barrel THIMO_RS10555 IPR035587 DUS-like, FMN-binding domain THIMO_RS10555 IPR004653 tRNA-dihydrouridine(20/20a) synthase THIMO_RS10575 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B THIMO_RS10590 IPR023214 HAD superfamily THIMO_RS10590 IPR006379 HAD-superfamily hydrolase, subfamily IIB THIMO_RS10590 IPR036412 HAD-like superfamily THIMO_RS10590 IPR038068 YcgL-like superfamily THIMO_RS10590 IPR006380 Sucrose-phosphatase-like, N-terminal THIMO_RS10590 IPR027354 YcgL domain THIMO_RS10595 IPR017853 Glycoside hydrolase superfamily THIMO_RS10600 IPR034904 Fe-S cluster assembly domain superfamily THIMO_RS10600 IPR002744 MIP18 family-like THIMO_RS10605 IPR011542 SUF system FeS cluster assembly, SufD THIMO_RS10605 IPR037284 SUF system FeS cluster assembly, SufBD superfamily THIMO_RS10605 IPR000825 SUF system FeS cluster assembly, SufBD THIMO_RS10610 IPR003593 AAA+ ATPase domain THIMO_RS10610 IPR017871 ABC transporter, conserved site THIMO_RS10610 IPR010230 FeS cluster assembly SUF system, ATPase SufC THIMO_RS10610 IPR003439 ABC transporter-like THIMO_RS10610 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10615 IPR000825 SUF system FeS cluster assembly, SufBD THIMO_RS10615 IPR037284 SUF system FeS cluster assembly, SufBD superfamily THIMO_RS10615 IPR010231 SUF system FeS cluster assembly, SufB THIMO_RS10625 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THIMO_RS10625 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase THIMO_RS10625 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS10625 IPR000192 Aminotransferase class V domain THIMO_RS10625 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS10625 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS10635 IPR003817 Phosphatidylserine decarboxylase-related THIMO_RS10635 IPR033177 Phosphatidylserine decarboxylase THIMO_RS10635 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 THIMO_RS10640 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal THIMO_RS10640 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) THIMO_RS10640 IPR006195 Aminoacyl-tRNA synthetase, class II THIMO_RS10640 IPR004525 Elongation factor P--(R)-beta-lysine ligase THIMO_RS10645 IPR011768 Translation elongation factor P THIMO_RS10645 IPR008991 Translation protein SH3-like domain superfamily THIMO_RS10645 IPR015365 Elongation factor P, C-terminal THIMO_RS10645 IPR001059 Translation elongation factor P/YeiP, central THIMO_RS10645 IPR020599 Translation elongation factor P/YeiP THIMO_RS10645 IPR014722 Ribosomal protein L2, domain 2 THIMO_RS10645 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS10645 IPR013185 Translation elongation factor, KOW-like THIMO_RS10645 IPR013852 Translation elongation factor P/YeiP, conserved site THIMO_RS10650 IPR013785 Aldolase-type TIM barrel THIMO_RS10650 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase THIMO_RS10650 IPR022462 Lysine-2,3-aminomutase-like THIMO_RS10650 IPR007197 Radical SAM THIMO_RS10685 IPR001036 Acriflavin resistance protein THIMO_RS10685 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THIMO_RS10700 IPR003562 Mutator MutX protein THIMO_RS10700 IPR015797 NUDIX hydrolase-like domain superfamily THIMO_RS10700 IPR020084 NUDIX hydrolase, conserved site THIMO_RS10700 IPR000086 NUDIX hydrolase domain THIMO_RS10705 IPR023513 Quinolinate synthase A, type 1 THIMO_RS10705 IPR003473 Quinolinate synthetase A THIMO_RS10705 IPR036094 Quinolinate synthetase A superfamily THIMO_RS10710 IPR009056 Cytochrome c-like domain THIMO_RS10710 IPR036909 Cytochrome c-like domain superfamily THIMO_RS10710 IPR024167 Cytochrome c4-like THIMO_RS10715 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THIMO_RS10715 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS10715 IPR023753 FAD/NAD(P)-binding domain THIMO_RS10715 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily THIMO_RS10715 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily THIMO_RS10715 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding THIMO_RS10715 IPR006311 Twin-arginine translocation pathway, signal sequence THIMO_RS10770 IPR036397 Ribonuclease H superfamily THIMO_RS10770 IPR012337 Ribonuclease H-like superfamily THIMO_RS10770 IPR001584 Integrase, catalytic core THIMO_RS10770 IPR025948 HTH-like domain THIMO_RS10775 IPR009057 Homeobox-like domain superfamily THIMO_RS10775 IPR002514 Transposase IS3/IS911family THIMO_RS10775 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS10785 IPR004176 Clp, N-terminal THIMO_RS10785 IPR001270 ClpA/B family THIMO_RS10785 IPR028299 ClpA/B, conserved site 2 THIMO_RS10785 IPR003593 AAA+ ATPase domain THIMO_RS10785 IPR003959 ATPase, AAA-type, core THIMO_RS10785 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10785 IPR018368 ClpA/B, conserved site 1 THIMO_RS10785 IPR041546 ClpA/ClpB, AAA lid domain THIMO_RS10785 IPR017730 Chaperonin ClpB THIMO_RS10785 IPR019489 Clp ATPase, C-terminal THIMO_RS10785 IPR036628 Clp, N-terminal domain superfamily THIMO_RS10790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS10790 IPR010233 Ubiquinone biosynthesis O-methyltransferase THIMO_RS10810 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain THIMO_RS10810 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site THIMO_RS10810 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site THIMO_RS10810 IPR006656 Molybdopterin oxidoreductase THIMO_RS10810 IPR009010 Aspartate decarboxylase-like domain superfamily THIMO_RS10810 IPR006657 Molybdopterin dinucleotide-binding domain THIMO_RS10820 IPR002699 ATPase, V1 complex, subunit D THIMO_RS10825 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10825 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THIMO_RS10825 IPR022879 V-type ATP synthase regulatory subunit B/beta THIMO_RS10825 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site THIMO_RS10825 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily THIMO_RS10825 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain THIMO_RS10830 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily THIMO_RS10830 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site THIMO_RS10830 IPR022878 V-type ATP synthase catalytic alpha chain THIMO_RS10830 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain THIMO_RS10830 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain THIMO_RS10830 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension THIMO_RS10830 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily THIMO_RS10830 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal THIMO_RS10830 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS10890 IPR025948 HTH-like domain THIMO_RS10890 IPR012337 Ribonuclease H-like superfamily THIMO_RS10890 IPR001584 Integrase, catalytic core THIMO_RS10890 IPR036397 Ribonuclease H superfamily THIMO_RS10915 IPR006680 Amidohydrolase-related THIMO_RS10915 IPR004721 Dihydroorotase homodimeric type THIMO_RS10915 IPR002195 Dihydroorotase, conserved site THIMO_RS10915 IPR032466 Metal-dependent hydrolase THIMO_RS10920 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising THIMO_RS10920 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site THIMO_RS10920 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal THIMO_RS10920 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal THIMO_RS10925 IPR010233 Ubiquinone biosynthesis O-methyltransferase THIMO_RS10925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS10935 IPR002347 Short-chain dehydrogenase/reductase SDR THIMO_RS10935 IPR036291 NAD(P)-binding domain superfamily THIMO_RS10935 IPR020904 Short-chain dehydrogenase/reductase, conserved site THIMO_RS10940 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit THIMO_RS10940 IPR014349 Rieske iron-sulphur protein THIMO_RS10940 IPR005805 Rieske iron-sulphur protein, C-terminal THIMO_RS10940 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal THIMO_RS10940 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily THIMO_RS10940 IPR017941 Rieske [2Fe-2S] iron-sulphur domain THIMO_RS10945 IPR022380 Glutamyl-Q tRNA(Asp) synthetase THIMO_RS10945 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain THIMO_RS10945 IPR000924 Glutamyl/glutaminyl-tRNA synthetase THIMO_RS10945 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS10950 IPR020458 Zinc finger, DksA/TraR C4-type conserved site THIMO_RS10950 IPR000962 Zinc finger, DksA/TraR C4-type THIMO_RS10950 IPR012784 RNA polymerase-binding transcription factor DksA THIMO_RS10950 IPR037187 DksA, N-terminal domain superfamily THIMO_RS10950 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria THIMO_RS10955 IPR040982 DNA polymerase III alpha subunit finger domain THIMO_RS10955 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type THIMO_RS10955 IPR029460 DNA polymerase, helix-hairpin-helix motif THIMO_RS10955 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain THIMO_RS10955 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain THIMO_RS10955 IPR016195 Polymerase/histidinol phosphatase-like THIMO_RS10955 IPR004013 PHP domain THIMO_RS10955 IPR003141 Polymerase/histidinol phosphatase, N-terminal THIMO_RS10955 IPR004805 DNA polymerase III, alpha subunit THIMO_RS10970 IPR011006 CheY-like superfamily THIMO_RS10970 IPR003607 HD/PDEase domain THIMO_RS10970 IPR037522 HD-GYP domain THIMO_RS10970 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS10990 IPR000644 CBS domain THIMO_RS10990 IPR015875 IMP dehydrogenase / GMP reductase, conserved site THIMO_RS10990 IPR001093 IMP dehydrogenase/GMP reductase THIMO_RS10990 IPR013785 Aldolase-type TIM barrel THIMO_RS10990 IPR005990 Inosine-5'-monophosphate dehydrogenase THIMO_RS10995 IPR020904 Short-chain dehydrogenase/reductase, conserved site THIMO_RS10995 IPR011283 Acetoacetyl-CoA reductase THIMO_RS10995 IPR002347 Short-chain dehydrogenase/reductase SDR THIMO_RS10995 IPR036291 NAD(P)-binding domain superfamily THIMO_RS11010 IPR008228 Uncharacterised conserved protein UCP006173 THIMO_RS11010 IPR005358 Putative zinc- or iron-chelating domain containing protein THIMO_RS11025 IPR000719 Protein kinase domain THIMO_RS11025 IPR008271 Serine/threonine-protein kinase, active site THIMO_RS11025 IPR011009 Protein kinase-like domain superfamily THIMO_RS11025 IPR005543 PASTA domain THIMO_RS11025 IPR017441 Protein kinase, ATP binding site THIMO_RS11055 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain THIMO_RS11055 IPR006344 RecBCD enzyme subunit RecD THIMO_RS11055 IPR027785 UvrD-like helicase C-terminal domain THIMO_RS11055 IPR003593 AAA+ ATPase domain THIMO_RS11055 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11060 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11060 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type THIMO_RS11060 IPR000212 DNA helicase, UvrD/REP type THIMO_RS11060 IPR014017 UvrD-like DNA helicase, C-terminal THIMO_RS11060 IPR004586 RecBCD enzyme subunit RecB THIMO_RS11060 IPR011604 Exonuclease, phage-type/RecB, C-terminal THIMO_RS11060 IPR034739 UvrD/AddA helicase, N-terminal THIMO_RS11060 IPR014016 UvrD-like helicase, ATP-binding domain THIMO_RS11060 IPR011335 Restriction endonuclease type II-like THIMO_RS11065 IPR011335 Restriction endonuclease type II-like THIMO_RS11065 IPR006697 RecBCD enzyme subunit RecC THIMO_RS11065 IPR013986 DExx box DNA helicase domain superfamily THIMO_RS11065 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11065 IPR041500 RecC, C-terminal THIMO_RS11075 IPR036768 DNA polymerase III subunit chi superfamily THIMO_RS11075 IPR007459 DNA polymerase III chi subunit, HolC THIMO_RS11080 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B THIMO_RS11080 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal THIMO_RS11080 IPR023042 Peptidase M17, leucine aminopeptidase THIMO_RS11080 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal THIMO_RS11095 IPR005467 Histidine kinase domain THIMO_RS11095 IPR035965 PAS domain superfamily THIMO_RS11095 IPR013767 PAS fold THIMO_RS11095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS11095 IPR000014 PAS domain THIMO_RS11095 IPR001610 PAC motif THIMO_RS11095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS11095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS11095 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS11095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS11095 IPR000700 PAS-associated, C-terminal THIMO_RS11100 IPR011006 CheY-like superfamily THIMO_RS11100 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS11100 IPR000792 Transcription regulator LuxR, C-terminal THIMO_RS11100 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS11110 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11110 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA THIMO_RS11110 IPR032672 TmcA/NAT10/Kre33 THIMO_RS11110 IPR038321 TmcA, C-terminal domain superfamily THIMO_RS11110 IPR007807 Helicase domain THIMO_RS11110 IPR000182 GNAT domain THIMO_RS11110 IPR016181 Acyl-CoA N-acyltransferase THIMO_RS11110 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal THIMO_RS11110 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain THIMO_RS11120 IPR006214 Bax inhibitor 1-related THIMO_RS11130 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) THIMO_RS11130 IPR006195 Aminoacyl-tRNA synthetase, class II THIMO_RS11130 IPR015866 Serine-tRNA synthetase, type1, N-terminal THIMO_RS11130 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily THIMO_RS11130 IPR033729 Serine-tRNA ligase catalytic core domain THIMO_RS11130 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm THIMO_RS11130 IPR002317 Serine-tRNA ligase, type1 THIMO_RS11135 IPR029064 50S ribosomal protein L30e-like THIMO_RS11135 IPR004441 RNA methyltransferase TrmH family THIMO_RS11135 IPR001537 tRNA/rRNA methyltransferase, SpoU type THIMO_RS11135 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THIMO_RS11135 IPR029028 Alpha/beta knot methyltransferases THIMO_RS11135 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB THIMO_RS11135 IPR013123 RNA 2-O ribose methyltransferase, substrate binding THIMO_RS11140 IPR004476 Ribonuclease II/ribonuclease R THIMO_RS11140 IPR013223 Ribonuclease B, N-terminal OB domain THIMO_RS11140 IPR022967 RNA-binding domain, S1 THIMO_RS11140 IPR003029 S1 domain THIMO_RS11140 IPR011129 Cold shock domain THIMO_RS11140 IPR001900 Ribonuclease II/R THIMO_RS11140 IPR040476 RNase II/RNase R, cold shock domain THIMO_RS11140 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS11140 IPR013668 Ribonuclease R winged-helix domain THIMO_RS11140 IPR011805 Ribonuclease R THIMO_RS11140 IPR022966 Ribonuclease II/R, conserved site THIMO_RS11150 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain THIMO_RS11150 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing THIMO_RS11150 IPR042295 NarX-like, N-terminal domain superfamily THIMO_RS11150 IPR029095 NarX-like, N-terminal THIMO_RS11150 IPR005467 Histidine kinase domain THIMO_RS11150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS11150 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS11150 IPR003660 HAMP domain THIMO_RS11155 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS11155 IPR000792 Transcription regulator LuxR, C-terminal THIMO_RS11155 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS11155 IPR016032 Signal transduction response regulator, C-terminal effector THIMO_RS11155 IPR011006 CheY-like superfamily THIMO_RS11160 IPR036873 Rhodanese-like domain superfamily THIMO_RS11160 IPR001763 Rhodanese-like domain THIMO_RS11160 IPR000594 THIF-type NAD/FAD binding fold THIMO_RS11160 IPR035985 Ubiquitin-activating enzyme THIMO_RS11175 IPR023214 HAD superfamily THIMO_RS11175 IPR006357 HAD-superfamily hydrolase, subfamily IIA THIMO_RS11175 IPR036412 HAD-like superfamily THIMO_RS11175 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 THIMO_RS11180 IPR025841 Circularly permuted ATP-grasp type 2 THIMO_RS11180 IPR007296 Domain of unknown function DUF403 THIMO_RS11185 IPR002931 Transglutaminase-like THIMO_RS11185 IPR038765 Papain-like cysteine peptidase superfamily THIMO_RS11185 IPR013589 Bacterial transglutaminase-like, N-terminal THIMO_RS11195 IPR012768 Malto-oligosyltrehalose trehalohydrolase THIMO_RS11195 IPR014756 Immunoglobulin E-set THIMO_RS11195 IPR013783 Immunoglobulin-like fold THIMO_RS11195 IPR017853 Glycoside hydrolase superfamily THIMO_RS11195 IPR004193 Glycoside hydrolase, family 13, N-terminal THIMO_RS11195 IPR013780 Glycosyl hydrolase, all-beta THIMO_RS11195 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) THIMO_RS11195 IPR006047 Glycosyl hydrolase, family 13, catalytic domain THIMO_RS11200 IPR013766 Thioredoxin domain THIMO_RS11200 IPR017937 Thioredoxin, conserved site THIMO_RS11200 IPR036249 Thioredoxin-like superfamily THIMO_RS11200 IPR005746 Thioredoxin THIMO_RS11205 IPR013766 Thioredoxin domain THIMO_RS11205 IPR017937 Thioredoxin, conserved site THIMO_RS11205 IPR005746 Thioredoxin THIMO_RS11205 IPR036249 Thioredoxin-like superfamily THIMO_RS11215 IPR003691 Putative fluoride ion transporter CrcB THIMO_RS11220 IPR000352 Peptide chain release factor class I THIMO_RS11225 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase THIMO_RS11225 IPR000462 CDP-alcohol phosphatidyltransferase THIMO_RS11230 IPR036249 Thioredoxin-like superfamily THIMO_RS11230 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal THIMO_RS11230 IPR042128 NuoE domain THIMO_RS11230 IPR002023 NADH-quinone oxidoreductase subunit E-like THIMO_RS11235 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS11235 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site THIMO_RS11235 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain THIMO_RS11235 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily THIMO_RS11235 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain THIMO_RS11235 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS11235 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily THIMO_RS11240 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THIMO_RS11240 IPR016214 NAD-reducing hydrogenase, HoxS gamma subunit THIMO_RS11240 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site THIMO_RS11240 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding THIMO_RS11240 IPR036010 2Fe-2S ferredoxin-like superfamily THIMO_RS11250 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site THIMO_RS11250 IPR029014 [NiFe]-hydrogenase, large subunit THIMO_RS11250 IPR001501 Nickel-dependent hydrogenase, large subunit THIMO_RS11270 IPR003738 SOS response associated peptidase (SRAP) THIMO_RS11270 IPR036590 SOS response associated peptidase-like THIMO_RS11280 IPR003660 HAMP domain THIMO_RS11280 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS11280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS11280 IPR005467 Histidine kinase domain THIMO_RS11280 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS11280 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS11280 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS11285 IPR011006 CheY-like superfamily THIMO_RS11285 IPR016032 Signal transduction response regulator, C-terminal effector THIMO_RS11285 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS11285 IPR001867 OmpR/PhoB-type DNA-binding domain THIMO_RS11285 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS11285 IPR039420 Transcriptional regulatory protein WalR-like THIMO_RS11295 IPR001126 UmuC domain THIMO_RS11295 IPR017961 DNA polymerase, Y-family, little finger domain THIMO_RS11295 IPR022880 DNA polymerase IV THIMO_RS11295 IPR036775 DNA polymerase, Y-family, little finger domain superfamily THIMO_RS11305 IPR001650 Helicase, C-terminal THIMO_RS11305 IPR036101 CarD-like/TRCF domain superfamily THIMO_RS11305 IPR003711 CarD-like/TRCF domain THIMO_RS11305 IPR011545 DEAD/DEAH box helicase domain THIMO_RS11305 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS11305 IPR004576 Transcription-repair coupling factor THIMO_RS11305 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11305 IPR041471 UvrB, interaction domain THIMO_RS11305 IPR005118 Transcription-repair-coupling factor, C-terminal domain THIMO_RS11305 IPR037235 TRCF-like, C-terminal domain THIMO_RS11315 IPR001763 Rhodanese-like domain THIMO_RS11315 IPR036873 Rhodanese-like domain superfamily THIMO_RS11320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS11320 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase THIMO_RS11325 IPR022892 Ribonuclease HI THIMO_RS11325 IPR012337 Ribonuclease H-like superfamily THIMO_RS11325 IPR002156 Ribonuclease H domain THIMO_RS11325 IPR036397 Ribonuclease H superfamily THIMO_RS11330 IPR026669 Arsenite methyltransferase-like THIMO_RS11330 IPR013216 Methyltransferase type 11 THIMO_RS11330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS11335 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase THIMO_RS11335 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site THIMO_RS11335 IPR037237 IlvD/EDD, N-terminal domain THIMO_RS11335 IPR004404 Dihydroxy-acid dehydratase THIMO_RS11335 IPR042096 Dihydroxy-acid dehydratase, C-terminal THIMO_RS11340 IPR018228 Deoxyribonuclease, TatD-related, conserved site THIMO_RS11340 IPR001130 TatD family THIMO_RS11340 IPR032466 Metal-dependent hydrolase THIMO_RS11340 IPR015991 Uncharacterised hydrolase TatD-type THIMO_RS11350 IPR004622 DNA polymerase III, delta prime subunit THIMO_RS11350 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal THIMO_RS11350 IPR015199 DNA polymerase III, delta subunit, C-terminal THIMO_RS11350 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11355 IPR039430 Thymidylate kinase-like domain THIMO_RS11355 IPR018094 Thymidylate kinase THIMO_RS11355 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11360 IPR003770 Endolytic murein transglycosylase THIMO_RS11365 IPR001544 Aminotransferase class IV THIMO_RS11365 IPR018300 Aminotransferase, class IV, conserved site THIMO_RS11365 IPR036038 Aminotransferase-like, PLP-dependent enzymes THIMO_RS11365 IPR017824 Aminodeoxychorismate lyase, class IV THIMO_RS11370 IPR016039 Thiolase-like THIMO_RS11370 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain THIMO_RS11370 IPR014030 Beta-ketoacyl synthase, N-terminal THIMO_RS11370 IPR014031 Beta-ketoacyl synthase, C-terminal THIMO_RS11370 IPR018201 Beta-ketoacyl synthase, active site THIMO_RS11370 IPR000794 Beta-ketoacyl synthase THIMO_RS11370 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 THIMO_RS11375 IPR006162 Phosphopantetheine attachment site THIMO_RS11375 IPR009081 Phosphopantetheine binding ACP domain THIMO_RS11375 IPR003231 Acyl carrier protein (ACP) THIMO_RS11375 IPR036736 ACP-like superfamily THIMO_RS11380 IPR036291 NAD(P)-binding domain superfamily THIMO_RS11380 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase THIMO_RS11380 IPR020904 Short-chain dehydrogenase/reductase, conserved site THIMO_RS11380 IPR002347 Short-chain dehydrogenase/reductase SDR THIMO_RS11385 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THIMO_RS11385 IPR024925 Malonyl CoA-acyl carrier protein transacylase THIMO_RS11385 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type THIMO_RS11385 IPR001227 Acyl transferase domain superfamily THIMO_RS11385 IPR014043 Acyl transferase THIMO_RS11385 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding THIMO_RS11390 IPR016039 Thiolase-like THIMO_RS11390 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 THIMO_RS11390 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III THIMO_RS11390 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal THIMO_RS11395 IPR003664 Fatty acid synthesis PlsX protein THIMO_RS11395 IPR012281 Phospholipid biosynthesis protein, PlsX-like THIMO_RS11400 IPR002677 Ribosomal protein L32p THIMO_RS11400 IPR011332 Zinc-binding ribosomal protein THIMO_RS11405 IPR003772 Large ribosomal RNA subunit accumulation protein YceD THIMO_RS11405 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria THIMO_RS11410 IPR001114 Adenylosuccinate synthetase THIMO_RS11410 IPR018220 Adenylosuccinate synthase, GTP-binding site THIMO_RS11410 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11410 IPR042109 Adenylosuccinate synthetase, domain 1 THIMO_RS11410 IPR042110 Adenylosuccinate synthetase, domain 2 THIMO_RS11410 IPR042111 Adenylosuccinate synthetase, domain 3 THIMO_RS11410 IPR033128 Adenylosuccinate synthase, active site THIMO_RS11415 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain THIMO_RS11415 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit THIMO_RS11415 IPR004517 ATP phosphoribosyltransferase regulatory subunit THIMO_RS11425 IPR001107 Band 7 domain THIMO_RS11425 IPR036013 Band 7/SPFH domain superfamily THIMO_RS11425 IPR010200 HflC THIMO_RS11430 IPR010201 HflK THIMO_RS11430 IPR001972 Stomatin family THIMO_RS11430 IPR036013 Band 7/SPFH domain superfamily THIMO_RS11430 IPR001107 Band 7 domain THIMO_RS11430 IPR020980 Menbrane protein HflK, N-terminal THIMO_RS11435 IPR025121 GTPase HflX, N-terminal THIMO_RS11435 IPR042108 GTPase HflX, N-terminal domain superfamily THIMO_RS11435 IPR006073 GTP binding domain THIMO_RS11435 IPR016496 GTPase HflX THIMO_RS11435 IPR032305 GTP-binding protein, middle domain THIMO_RS11435 IPR030394 HflX-type guanine nucleotide-binding (G) domain THIMO_RS11435 IPR035647 EF-G domain III/V-like THIMO_RS11435 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11440 IPR005001 RNA-binding protein Hfq THIMO_RS11440 IPR010920 LSM domain superfamily THIMO_RS11445 IPR039657 Dimethylallyltransferase THIMO_RS11445 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11445 IPR018022 IPP transferase THIMO_RS11450 IPR042120 MutL, C-terminal domain, dimerisation subdomain THIMO_RS11450 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS11450 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS11450 IPR037198 MutL, C-terminal domain superfamily THIMO_RS11450 IPR042121 MutL, C-terminal domain, regulatory subdomain THIMO_RS11450 IPR014790 MutL, C-terminal, dimerisation THIMO_RS11450 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms THIMO_RS11450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS11450 IPR013507 DNA mismatch repair protein, S5 domain 2-like THIMO_RS11450 IPR014762 DNA mismatch repair, conserved site THIMO_RS11450 IPR020667 DNA mismatch repair protein, MutL THIMO_RS11450 IPR002099 DNA mismatch repair protein family, N-terminal THIMO_RS11465 IPR001650 Helicase, C-terminal THIMO_RS11465 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11465 IPR005259 Primosomal protein N' THIMO_RS11465 IPR041222 Primosomal protein N', 3' DNA-binding domain THIMO_RS11465 IPR041236 Primosomal protein N, C-terminal domain THIMO_RS11465 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain THIMO_RS11465 IPR011545 DEAD/DEAH box helicase domain THIMO_RS11465 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily THIMO_RS11465 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS11475 IPR011009 Protein kinase-like domain superfamily THIMO_RS11475 IPR016477 Fructosamine/Ketosamine-3-kinase THIMO_RS11490 IPR005133 Na+/H+ antiporter subunit G THIMO_RS11500 IPR007182 Na+/H+ antiporter MnhB subunit-related protein THIMO_RS11500 IPR005281 Monovalent cation:proton antiporter, subunit B THIMO_RS11505 IPR006673 Mnh complex subunit C1 THIMO_RS11505 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like THIMO_RS11510 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THIMO_RS11510 IPR003918 NADH:ubiquinone oxidoreductase THIMO_RS11510 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 THIMO_RS11515 IPR003918 NADH:ubiquinone oxidoreductase THIMO_RS11515 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 THIMO_RS11515 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THIMO_RS11525 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit THIMO_RS11525 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit THIMO_RS11530 IPR029014 [NiFe]-hydrogenase, large subunit THIMO_RS11530 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H THIMO_RS11530 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site THIMO_RS11530 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit THIMO_RS11530 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily THIMO_RS11530 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily THIMO_RS11530 IPR001135 NADH-quinone oxidoreductase, subunit D THIMO_RS11530 IPR023062 NADH dehydrogenase, subunit CD THIMO_RS11530 IPR010218 NADH dehydrogenase, subunit C THIMO_RS11535 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site THIMO_RS11535 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily THIMO_RS11535 IPR029014 [NiFe]-hydrogenase, large subunit THIMO_RS11535 IPR001135 NADH-quinone oxidoreductase, subunit D THIMO_RS11535 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H THIMO_RS11545 IPR002758 Na+/H+ antiporter subunit E THIMO_RS11555 IPR038734 Uncharacterized protein YhaN, AAA domain THIMO_RS11555 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11560 IPR014576 Predicted phosphoesterase, YhaO type THIMO_RS11560 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain THIMO_RS11560 IPR029052 Metallo-dependent phosphatase-like THIMO_RS11560 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type THIMO_RS11590 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS11590 IPR000192 Aminotransferase class V domain THIMO_RS11590 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THIMO_RS11590 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS11590 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS11590 IPR010970 Cysteine desulfurase, SufS THIMO_RS11600 IPR036107 Carbon storage regulator superfamily THIMO_RS11600 IPR003751 Translational regulator CsrA THIMO_RS11605 IPR027795 CASTOR, ACT domain THIMO_RS11605 IPR036393 Acetylglutamate kinase-like superfamily THIMO_RS11605 IPR041740 Aspartokinase catalytic domain THIMO_RS11605 IPR001048 Aspartate/glutamate/uridylate kinase THIMO_RS11605 IPR005260 Aspartate kinase, monofunctional class THIMO_RS11605 IPR001341 Aspartate kinase THIMO_RS11605 IPR018042 Aspartate kinase, conserved site THIMO_RS11605 IPR002912 ACT domain THIMO_RS11610 IPR012947 Threonyl/alanyl tRNA synthetase, SAD THIMO_RS11610 IPR003156 DHHA1 domain THIMO_RS11610 IPR009000 Translation protein, beta-barrel domain superfamily THIMO_RS11610 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily THIMO_RS11610 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria THIMO_RS11610 IPR002318 Alanine-tRNA ligase, class IIc THIMO_RS11610 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal THIMO_RS11610 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain THIMO_RS11610 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily THIMO_RS11615 IPR003783 Regulatory protein RecX THIMO_RS11615 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS11620 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface THIMO_RS11620 IPR023400 DNA recombination and repair protein RecA, C-terminal THIMO_RS11620 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain THIMO_RS11620 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11620 IPR020584 DNA recombination/repair protein RecA, conserved site THIMO_RS11620 IPR013765 DNA recombination and repair protein RecA THIMO_RS11620 IPR003593 AAA+ ATPase domain THIMO_RS11625 IPR009097 Cyclic phosphodiesterase THIMO_RS11625 IPR014051 Phosphoesterase, HXTX THIMO_RS11625 IPR004175 RNA 2',3'-cyclic phosphodiesterase THIMO_RS11630 IPR008136 CinA, C-terminal THIMO_RS11630 IPR036653 CinA-like, C-terminal THIMO_RS11640 IPR036010 2Fe-2S ferredoxin-like superfamily THIMO_RS11640 IPR017938 Riboflavin synthase-like beta-barrel THIMO_RS11640 IPR001433 Oxidoreductase FAD/NAD(P)-binding THIMO_RS11640 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain THIMO_RS11640 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THIMO_RS11640 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain THIMO_RS11640 IPR012675 Beta-grasp domain superfamily THIMO_RS11640 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site THIMO_RS11640 IPR017927 FAD-binding domain, ferredoxin reductase-type THIMO_RS11645 IPR002925 Dienelactone hydrolase THIMO_RS11645 IPR029058 Alpha/Beta hydrolase fold THIMO_RS11650 IPR002081 Cryptochrome/DNA photolyase class 1 THIMO_RS11650 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily THIMO_RS11650 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily THIMO_RS11650 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain THIMO_RS11650 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal THIMO_RS11650 IPR006050 DNA photolyase, N-terminal THIMO_RS11650 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS11655 IPR023368 Uncharacterised protein family UPF0066, conserved site THIMO_RS11655 IPR041369 TrmO, C-terminal THIMO_RS11655 IPR036413 YaeB-like superfamily THIMO_RS11655 IPR036414 YaeB, N-terminal domain superfamily THIMO_RS11655 IPR040372 YaeB-like THIMO_RS11655 IPR023370 TrmO-like, N-terminal domain THIMO_RS11660 IPR023430 Peptidase HybD-like domain superfamily THIMO_RS11660 IPR000671 Peptidase A31 family THIMO_RS11660 IPR004419 Peptidase A31, hydrogenase expression/formation protein THIMO_RS11665 IPR001501 Nickel-dependent hydrogenase, large subunit THIMO_RS11665 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site THIMO_RS11665 IPR029014 [NiFe]-hydrogenase, large subunit THIMO_RS11675 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily THIMO_RS11675 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC THIMO_RS11675 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain THIMO_RS11685 IPR003959 ATPase, AAA-type, core THIMO_RS11685 IPR003593 AAA+ ATPase domain THIMO_RS11685 IPR021886 MgsA AAA+ ATPase C-terminal THIMO_RS11685 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11685 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal THIMO_RS11685 IPR032423 AAA C-terminal domain THIMO_RS11690 IPR029046 Lipoprotein localisation LolA/LolB/LppX THIMO_RS11690 IPR004564 Outer membrane lipoprotein carrier protein LolA-like THIMO_RS11690 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria THIMO_RS11695 IPR002543 FtsK domain THIMO_RS11695 IPR041027 FtsK alpha domain THIMO_RS11695 IPR025199 DNA translocase FtsK, 4TM region THIMO_RS11695 IPR003593 AAA+ ATPase domain THIMO_RS11695 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS11695 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11695 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS11695 IPR018541 FtsK gamma domain THIMO_RS11700 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site THIMO_RS11700 IPR005982 Thioredoxin reductase THIMO_RS11700 IPR023753 FAD/NAD(P)-binding domain THIMO_RS11700 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS11710 IPR016181 Acyl-CoA N-acyltransferase THIMO_RS11710 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal THIMO_RS11710 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase THIMO_RS11715 IPR016181 Acyl-CoA N-acyltransferase THIMO_RS11715 IPR017138 Aspartate/glutamate leucyltransferase THIMO_RS11715 IPR030700 N-end rule aminoacyl transferase THIMO_RS11715 IPR007472 N-end rule aminoacyl transferase, C-terminal THIMO_RS11715 IPR007471 N-end aminoacyl transferase, N-terminal THIMO_RS11720 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt THIMO_RS11725 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal THIMO_RS11725 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily THIMO_RS11725 IPR017926 Glutamine amidotransferase THIMO_RS11725 IPR029062 Class I glutamine amidotransferase-like THIMO_RS11725 IPR010073 Phosphoribosylformylglycinamidine synthase PurL THIMO_RS11725 IPR036921 PurM-like, N-terminal domain superfamily THIMO_RS11725 IPR010918 PurM-like, C-terminal domain THIMO_RS11725 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain THIMO_RS11725 IPR036676 PurM-like, C-terminal domain superfamily THIMO_RS11750 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS11750 IPR014293 RNA polymerase sigma-70, actinobacteria THIMO_RS11750 IPR014284 RNA polymerase sigma-70 like domain THIMO_RS11750 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 THIMO_RS11750 IPR013325 RNA polymerase sigma factor, region 2 THIMO_RS11750 IPR013324 RNA polymerase sigma factor, region 3/4-like THIMO_RS11750 IPR039425 RNA polymerase sigma-70 like THIMO_RS11750 IPR007627 RNA polymerase sigma-70 region 2 THIMO_RS11750 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site THIMO_RS11770 IPR006638 Elp3/MiaB/NifB THIMO_RS11770 IPR005839 Methylthiotransferase THIMO_RS11770 IPR023404 Radical SAM, alpha/beta horseshoe THIMO_RS11770 IPR007197 Radical SAM THIMO_RS11770 IPR020612 Methylthiotransferase, conserved site THIMO_RS11770 IPR005840 Ribosomal protein S12 methylthiotransferase RimO THIMO_RS11770 IPR013848 Methylthiotransferase, N-terminal THIMO_RS11770 IPR002792 TRAM domain THIMO_RS11770 IPR038135 Methylthiotransferase, N-terminal domain superfamily THIMO_RS11770 IPR041582 RimO, TRAM domain THIMO_RS11775 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal THIMO_RS11775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS11775 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase THIMO_RS11775 IPR000014 PAS domain THIMO_RS11775 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal THIMO_RS11775 IPR013656 PAS fold-4 THIMO_RS11775 IPR035965 PAS domain superfamily THIMO_RS11775 IPR000780 MCP methyltransferase, CheR-type THIMO_RS11775 IPR035909 Methylesterase CheB, C-terminal THIMO_RS11780 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal THIMO_RS11780 IPR003346 Transposase, IS116/IS110/IS902 THIMO_RS11790 IPR011006 CheY-like superfamily THIMO_RS11790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS11790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS11790 IPR001610 PAC motif THIMO_RS11790 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS11790 IPR000700 PAS-associated, C-terminal THIMO_RS11790 IPR035965 PAS domain superfamily THIMO_RS11790 IPR013656 PAS fold-4 THIMO_RS11790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS11790 IPR005467 Histidine kinase domain THIMO_RS11790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS11790 IPR000014 PAS domain THIMO_RS11790 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS11795 IPR000792 Transcription regulator LuxR, C-terminal THIMO_RS11795 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS11795 IPR011006 CheY-like superfamily THIMO_RS11795 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS11800 IPR010920 LSM domain superfamily THIMO_RS11800 IPR011066 Mechanosensitive ion channel MscS, C-terminal THIMO_RS11800 IPR008910 Conserved TM helix THIMO_RS11800 IPR023408 Mechanosensitive ion channel MscS domain superfamily THIMO_RS11800 IPR006686 Mechanosensitive ion channel MscS, conserved site THIMO_RS11800 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 THIMO_RS11800 IPR006685 Mechanosensitive ion channel MscS THIMO_RS11810 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain THIMO_RS11810 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain THIMO_RS11810 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger THIMO_RS11815 IPR018723 Protein of unknown function DUF2254, membrane THIMO_RS11835 IPR002549 Transmembrane protein TqsA-like THIMO_RS11880 IPR007055 BON domain THIMO_RS11880 IPR014004 Transport-associated and nodulation domain, bacteria THIMO_RS11905 IPR037824 NdvB, GH94N domain 2 THIMO_RS11905 IPR037820 NdvB, GH94N domain 1 THIMO_RS11905 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily THIMO_RS11905 IPR012341 Six-hairpin glycosidase-like superfamily THIMO_RS11905 IPR033432 Glycosyl hydrolase 36, catalytic domain THIMO_RS11905 IPR011013 Galactose mutarotase-like domain superfamily THIMO_RS11905 IPR019282 Domain of unknown function DUF2329 THIMO_RS11905 IPR009342 Putative carbohydrate binding domain THIMO_RS11905 IPR010383 Glycosyl hydrolase 94 THIMO_RS11905 IPR008928 Six-hairpin glycosidase superfamily THIMO_RS11910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS11910 IPR000780 MCP methyltransferase, CheR-type THIMO_RS11910 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase THIMO_RS11910 IPR013656 PAS fold-4 THIMO_RS11910 IPR035965 PAS domain superfamily THIMO_RS11910 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal THIMO_RS11910 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal THIMO_RS11910 IPR000014 PAS domain THIMO_RS11910 IPR035909 Methylesterase CheB, C-terminal THIMO_RS11915 IPR001633 EAL domain THIMO_RS11915 IPR035919 EAL domain superfamily THIMO_RS11915 IPR000160 GGDEF domain THIMO_RS11915 IPR005330 MHYT domain THIMO_RS11915 IPR029787 Nucleotide cyclase THIMO_RS11920 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase THIMO_RS11925 IPR006076 FAD dependent oxidoreductase THIMO_RS11925 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS11925 IPR012727 Glycine oxidase ThiO THIMO_RS11950 IPR003400 Biopolymer transport protein ExbD/TolR THIMO_RS11955 IPR002898 MotA/TolQ/ExbB proton channel THIMO_RS11960 IPR039426 Vitamin B12 transporter BtuB-like THIMO_RS11960 IPR010917 TonB-dependent receptor, conserved site THIMO_RS11960 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily THIMO_RS11960 IPR012910 TonB-dependent receptor, plug domain THIMO_RS11960 IPR037066 TonB-dependent receptor, plug domain superfamily THIMO_RS11960 IPR000531 TonB-dependent receptor-like, beta-barrel THIMO_RS11960 IPR010916 TonB box, conserved site THIMO_RS11965 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11965 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal THIMO_RS11965 IPR003495 CobW/HypB/UreG, nucleotide-binding domain THIMO_RS11990 IPR003439 ABC transporter-like THIMO_RS11990 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS11990 IPR003593 AAA+ ATPase domain THIMO_RS11990 IPR017871 ABC transporter, conserved site THIMO_RS12000 IPR002481 Ferric-uptake regulator THIMO_RS12000 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS12000 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS12005 IPR037294 ABC transporter, BtuC-like THIMO_RS12005 IPR001626 ABC transporter, TroCD-like THIMO_RS12010 IPR017871 ABC transporter, conserved site THIMO_RS12010 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12010 IPR003439 ABC transporter-like THIMO_RS12010 IPR003593 AAA+ ATPase domain THIMO_RS12015 IPR035520 High-affinity zinc uptake system protein ZnuA THIMO_RS12015 IPR006127 Periplasmic solute binding protein, ZnuA-like THIMO_RS12020 IPR020458 Zinc finger, DksA/TraR C4-type conserved site THIMO_RS12020 IPR000962 Zinc finger, DksA/TraR C4-type THIMO_RS12020 IPR037187 DksA, N-terminal domain superfamily THIMO_RS12020 IPR012784 RNA polymerase-binding transcription factor DksA THIMO_RS12030 IPR003495 CobW/HypB/UreG, nucleotide-binding domain THIMO_RS12030 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12030 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal THIMO_RS12050 IPR025857 MacB-like periplasmic core domain THIMO_RS12050 IPR003838 ABC transporter permease protein domain THIMO_RS12050 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E THIMO_RS12060 IPR003439 ABC transporter-like THIMO_RS12060 IPR003593 AAA+ ATPase domain THIMO_RS12060 IPR017871 ABC transporter, conserved site THIMO_RS12060 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12080 IPR038078 PhoU-like domain superfamily THIMO_RS12080 IPR028366 Phosphate transport system protein PhoU THIMO_RS12080 IPR026022 PhoU domain THIMO_RS12085 IPR003593 AAA+ ATPase domain THIMO_RS12085 IPR015850 ABC transporter, phosphate import, PstB THIMO_RS12085 IPR003439 ABC transporter-like THIMO_RS12085 IPR017871 ABC transporter, conserved site THIMO_RS12085 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12085 IPR005670 Phosphate transport system permease protein 1 THIMO_RS12090 IPR005672 Phosphate transport system permease protein PstA THIMO_RS12090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS12090 IPR035906 MetI-like superfamily THIMO_RS12095 IPR011864 Phosphate ABC transporter, permease protein PstC THIMO_RS12095 IPR035906 MetI-like superfamily THIMO_RS12095 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS12110 IPR038076 MgtE, N-terminal domain superfamily THIMO_RS12110 IPR038048 Magnesium transporter MgtE, transmembrane domain THIMO_RS12110 IPR000644 CBS domain THIMO_RS12110 IPR006669 Magnesium transporter MgtE THIMO_RS12110 IPR006667 SLC41 divalent cation transporters, integral membrane domain THIMO_RS12110 IPR006668 Magnesium transporter, MgtE intracellular domain THIMO_RS12110 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily THIMO_RS12115 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit THIMO_RS12115 IPR004681 TRAP transporter large membrane protein DctM THIMO_RS12120 IPR007387 TRAP transporter, small membrane protein DctQ THIMO_RS12125 IPR004682 TRAP transporter solute receptor, DctP family THIMO_RS12125 IPR018389 TRAP transporter solute receptor DctP/TeaA THIMO_RS12125 IPR038404 TRAP transporter solute receptor DctP superfamily THIMO_RS12130 IPR036291 NAD(P)-binding domain superfamily THIMO_RS12130 IPR022663 Dihydrodipicolinate reductase, C-terminal THIMO_RS12130 IPR000846 Dihydrodipicolinate reductase, N-terminal THIMO_RS12130 IPR022664 Dihydrodipicolinate reductase, conserved site THIMO_RS12130 IPR023940 Dihydrodipicolinate reductase THIMO_RS12135 IPR036869 Chaperone J-domain superfamily THIMO_RS12135 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily THIMO_RS12135 IPR001305 Heat shock protein DnaJ, cysteine-rich domain THIMO_RS12135 IPR008971 HSP40/DnaJ peptide-binding THIMO_RS12135 IPR018253 DnaJ domain, conserved site THIMO_RS12135 IPR002939 Chaperone DnaJ, C-terminal THIMO_RS12135 IPR012724 Chaperone DnaJ THIMO_RS12135 IPR001623 DnaJ domain THIMO_RS12140 IPR018181 Heat shock protein 70, conserved site THIMO_RS12140 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily THIMO_RS12140 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily THIMO_RS12140 IPR013126 Heat shock protein 70 family THIMO_RS12140 IPR012725 Chaperone DnaK THIMO_RS12145 IPR009012 GrpE nucleotide exchange factor, head THIMO_RS12145 IPR000740 GrpE nucleotide exchange factor THIMO_RS12145 IPR013805 GrpE nucleotide exchange factor, coiled-coil THIMO_RS12150 IPR002571 Heat-inducible transcription repressor HrcA THIMO_RS12150 IPR029016 GAF-like domain superfamily THIMO_RS12150 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS12150 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS12150 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain THIMO_RS12150 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily THIMO_RS12150 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal THIMO_RS12155 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal THIMO_RS12155 IPR002504 NAD kinase THIMO_RS12155 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal THIMO_RS12155 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily THIMO_RS12160 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12160 IPR003395 RecF/RecN/SMC, N-terminal THIMO_RS12160 IPR004604 DNA recombination/repair protein RecN THIMO_RS12165 IPR002481 Ferric-uptake regulator THIMO_RS12165 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS12165 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS12170 IPR037873 BamE-like THIMO_RS12170 IPR007450 Lipoprotein SmpA/OmlA THIMO_RS12170 IPR026592 Outer membrane protein assembly factor BamE THIMO_RS12175 IPR037021 RnfH superfamily THIMO_RS12175 IPR005346 RnfH protein THIMO_RS12175 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp THIMO_RS12180 IPR005031 Coenzyme Q-binding protein COQ10, START domain THIMO_RS12180 IPR023393 START-like domain superfamily THIMO_RS12185 IPR000175 Sodium:neurotransmitter symporter THIMO_RS12185 IPR037272 Sodium:neurotransmitter symporter superfamily THIMO_RS12190 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily THIMO_RS12190 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I THIMO_RS12190 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III THIMO_RS12190 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II THIMO_RS12190 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III THIMO_RS12190 IPR005843 Alpha-D-phosphohexomutase, C-terminal THIMO_RS12190 IPR016066 Alpha-D-phosphohexomutase, conserved site THIMO_RS12190 IPR005841 Alpha-D-phosphohexomutase superfamily THIMO_RS12190 IPR006352 Phosphoglucosamine mutase, bacterial type THIMO_RS12195 IPR000489 Pterin-binding domain THIMO_RS12195 IPR011005 Dihydropteroate synthase-like THIMO_RS12195 IPR006390 Dihydropteroate synthase THIMO_RS12200 IPR003593 AAA+ ATPase domain THIMO_RS12200 IPR041569 AAA ATPase, AAA+ lid domain THIMO_RS12200 IPR000642 Peptidase M41 THIMO_RS12200 IPR011546 Peptidase M41, FtsH extracellular THIMO_RS12200 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12200 IPR005936 Peptidase, FtsH THIMO_RS12200 IPR037219 Peptidase M41-like THIMO_RS12200 IPR003959 ATPase, AAA-type, core THIMO_RS12200 IPR003960 ATPase, AAA-type, conserved site THIMO_RS12205 IPR015507 Ribosomal RNA large subunit methyltransferase E THIMO_RS12205 IPR002877 Ribosomal RNA methyltransferase FtsJ domain THIMO_RS12205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS12210 IPR011761 ATP-grasp fold THIMO_RS12210 IPR006284 Glutathione synthetase, prokaryotic THIMO_RS12210 IPR004218 Prokaryotic glutathione synthetase, ATP-binding THIMO_RS12210 IPR004215 Prokaryotic glutathione synthetase, N-terminal THIMO_RS12210 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS12210 IPR016185 Pre-ATP-grasp domain superfamily THIMO_RS12220 IPR037682 TonB, C-terminal THIMO_RS12220 IPR006260 TonB/TolA, C-terminal THIMO_RS12220 IPR003538 Gram-negative bacterial TonB protein THIMO_RS12225 IPR003774 Protein of unknown function UPF0301 THIMO_RS12230 IPR012337 Ribonuclease H-like superfamily THIMO_RS12230 IPR005227 Putative pre-16S rRNA nuclease THIMO_RS12230 IPR037027 YqgF/RNase H-like domain superfamily THIMO_RS12230 IPR006641 YqgF/RNase H-like domain THIMO_RS12235 IPR000836 Phosphoribosyltransferase domain THIMO_RS12235 IPR029057 Phosphoribosyltransferase-like THIMO_RS12235 IPR023050 Bifunctional protein PyrR THIMO_RS12240 IPR002082 Aspartate carbamoyltransferase THIMO_RS12240 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding THIMO_RS12240 IPR006130 Aspartate/ornithine carbamoyltransferase THIMO_RS12240 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily THIMO_RS12240 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain THIMO_RS12245 IPR011059 Metal-dependent hydrolase, composite domain superfamily THIMO_RS12245 IPR004722 Dihydroorotase THIMO_RS12245 IPR032466 Metal-dependent hydrolase THIMO_RS12245 IPR006680 Amidohydrolase-related THIMO_RS12250 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit THIMO_RS12250 IPR017927 FAD-binding domain, ferredoxin reductase-type THIMO_RS12250 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain THIMO_RS12250 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain THIMO_RS12250 IPR001433 Oxidoreductase FAD/NAD(P)-binding THIMO_RS12250 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit THIMO_RS12250 IPR000951 Phthalate dioxygenase reductase THIMO_RS12250 IPR017938 Riboflavin synthase-like beta-barrel THIMO_RS12250 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily THIMO_RS12275 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal THIMO_RS12275 IPR040634 Arginine decarboxylase, helical bundle domain THIMO_RS12275 IPR002985 Arginine decarboxylase THIMO_RS12275 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site THIMO_RS12275 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal THIMO_RS12275 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site THIMO_RS12275 IPR041128 Arginine decarboxylase, C-terminal helical THIMO_RS12275 IPR029066 PLP-binding barrel THIMO_RS12275 IPR000183 Ornithine/DAP/Arg decarboxylase THIMO_RS12280 IPR000688 Hydrogenase maturation factor HypA/HybF THIMO_RS12285 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12285 IPR004392 Hydrogenase maturation factor HypB THIMO_RS12285 IPR003495 CobW/HypB/UreG, nucleotide-binding domain THIMO_RS12285 IPR003593 AAA+ ATPase domain THIMO_RS12305 IPR036065 BolA-like superfamily THIMO_RS12305 IPR002634 BolA protein THIMO_RS12310 IPR011010 DNA breaking-rejoining enzyme, catalytic core THIMO_RS12310 IPR010998 Integrase/recombinase, N-terminal THIMO_RS12310 IPR011946 Integrase, integron-type THIMO_RS12310 IPR004107 Integrase, SAM-like, N-terminal THIMO_RS12310 IPR002104 Integrase, catalytic domain THIMO_RS12310 IPR013762 Integrase-like, catalytic domain superfamily THIMO_RS12335 IPR031157 Tr-type G domain, conserved site THIMO_RS12335 IPR004548 Peptide chain release factor 3 THIMO_RS12335 IPR032090 Peptide chain release factor 3, C-terminal THIMO_RS12335 IPR035647 EF-G domain III/V-like THIMO_RS12335 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12335 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily THIMO_RS12335 IPR041732 Peptide chain release factor 3, GTP-binding domain THIMO_RS12335 IPR005225 Small GTP-binding protein domain THIMO_RS12335 IPR000795 Transcription factor, GTP-binding domain THIMO_RS12335 IPR009000 Translation protein, beta-barrel domain superfamily THIMO_RS12340 IPR000101 Gamma-glutamyltranspeptidase THIMO_RS12340 IPR029055 Nucleophile aminohydrolases, N-terminal THIMO_RS12350 IPR017871 ABC transporter, conserved site THIMO_RS12350 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily THIMO_RS12350 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12350 IPR003439 ABC transporter-like THIMO_RS12350 IPR032781 ABC-transporter extension domain THIMO_RS12350 IPR032524 ABC transporter Uup, C-terminal THIMO_RS12350 IPR003593 AAA+ ATPase domain THIMO_RS12360 IPR003439 ABC transporter-like THIMO_RS12360 IPR017871 ABC transporter, conserved site THIMO_RS12360 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12360 IPR004602 UvrABC system subunit A THIMO_RS12360 IPR041552 UvrA DNA-binding domain THIMO_RS12360 IPR041102 UvrA, interaction domain THIMO_RS12365 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily THIMO_RS12365 IPR016166 FAD-binding domain, PCMH-type THIMO_RS12365 IPR004113 FAD-linked oxidase, C-terminal THIMO_RS12365 IPR016167 FAD-binding, type PCMH, subdomain 1 THIMO_RS12365 IPR016169 FAD-binding, type PCMH, subdomain 2 THIMO_RS12365 IPR016164 FAD-linked oxidase-like, C-terminal THIMO_RS12365 IPR006094 FAD linked oxidase, N-terminal THIMO_RS12365 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 THIMO_RS12365 IPR036318 FAD-binding, type PCMH-like superfamily THIMO_RS12380 IPR024167 Cytochrome c4-like THIMO_RS12380 IPR036909 Cytochrome c-like domain superfamily THIMO_RS12380 IPR009056 Cytochrome c-like domain THIMO_RS12385 IPR015590 Aldehyde dehydrogenase domain THIMO_RS12385 IPR016162 Aldehyde dehydrogenase, N-terminal THIMO_RS12385 IPR016161 Aldehyde/histidinol dehydrogenase THIMO_RS12385 IPR029510 Aldehyde dehydrogenase, glutamic acid active site THIMO_RS12385 IPR016163 Aldehyde dehydrogenase, C-terminal THIMO_RS12395 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like THIMO_RS12395 IPR018060 DNA binding HTH domain, AraC-type THIMO_RS12395 IPR018062 HTH domain AraC-type, conserved site THIMO_RS12395 IPR037923 Transcription regulator HTH-like THIMO_RS12395 IPR009057 Homeobox-like domain superfamily THIMO_RS12400 IPR029060 PIN-like domain superfamily THIMO_RS12400 IPR008918 Helix-hairpin-helix motif, class 2 THIMO_RS12400 IPR002298 DNA polymerase A THIMO_RS12400 IPR018320 DNA polymerase 1 THIMO_RS12400 IPR012337 Ribonuclease H-like superfamily THIMO_RS12400 IPR001098 DNA-directed DNA polymerase, family A, palm domain THIMO_RS12400 IPR019760 DNA-directed DNA polymerase, family A, conserved site THIMO_RS12400 IPR036279 5'-3' exonuclease, C-terminal domain superfamily THIMO_RS12400 IPR002421 5'-3' exonuclease, N-terminal THIMO_RS12400 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal THIMO_RS12400 IPR002562 3'-5' exonuclease domain THIMO_RS12400 IPR036397 Ribonuclease H superfamily THIMO_RS12400 IPR020045 DNA polymerase I-like, H3TH domain THIMO_RS12405 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS12405 IPR000792 Transcription regulator LuxR, C-terminal THIMO_RS12405 IPR011006 CheY-like superfamily THIMO_RS12405 IPR016032 Signal transduction response regulator, C-terminal effector THIMO_RS12420 IPR002559 Transposase, IS4-like THIMO_RS12420 IPR032806 H repeat-associated protein, N-terminal THIMO_RS12425 IPR029028 Alpha/beta knot methyltransferases THIMO_RS12425 IPR003742 RNA methyltransferase RlmH THIMO_RS12425 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THIMO_RS12430 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein THIMO_RS12430 IPR029001 Inosine triphosphate pyrophosphatase-like THIMO_RS12435 IPR022967 RNA-binding domain, S1 THIMO_RS12435 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G THIMO_RS12435 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS12435 IPR004659 Ribonuclease E/G THIMO_RS12435 IPR003029 S1 domain THIMO_RS12450 IPR036526 Carbon-nitrogen hydrolase superfamily THIMO_RS12450 IPR003010 Carbon-nitrogen hydrolase THIMO_RS12450 IPR001110 Uncharacterised protein family UPF0012, conserved site THIMO_RS12455 IPR036059 Metalloprotease TldD/PmbA superfamily THIMO_RS12455 IPR025502 TldD THIMO_RS12455 IPR002510 Metalloprotease TldD/PmbA THIMO_RS12455 IPR035068 Metalloprotease TldD/PmbA, N-terminal THIMO_RS12460 IPR002510 Metalloprotease TldD/PmbA THIMO_RS12460 IPR036059 Metalloprotease TldD/PmbA superfamily THIMO_RS12460 IPR035068 Metalloprotease TldD/PmbA, N-terminal THIMO_RS12470 IPR003251 Rubrerythrin THIMO_RS12470 IPR024934 Rubredoxin-like domain THIMO_RS12470 IPR012347 Ferritin-like THIMO_RS12470 IPR009040 Ferritin-like diiron domain THIMO_RS12470 IPR009078 Ferritin-like superfamily THIMO_RS12475 IPR002589 Macro domain THIMO_RS12480 IPR015984 Cytochrome c prime, subgroup THIMO_RS12480 IPR010980 Cytochrome c/b562 THIMO_RS12480 IPR002321 Cytochrome c, class II THIMO_RS12480 IPR012127 Cytochrome c prime THIMO_RS12500 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site THIMO_RS12500 IPR029056 Ribokinase-like THIMO_RS12500 IPR011611 Carbohydrate kinase PfkB THIMO_RS12515 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase THIMO_RS12515 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial THIMO_RS12515 IPR000462 CDP-alcohol phosphatidyltransferase THIMO_RS12520 IPR000305 GIY-YIG endonuclease THIMO_RS12520 IPR004791 UvrABC system, subunit C THIMO_RS12520 IPR036876 UVR domain superfamily THIMO_RS12520 IPR035901 GIY-YIG endonuclease superfamily THIMO_RS12520 IPR001943 UVR domain THIMO_RS12520 IPR010994 RuvA domain 2-like THIMO_RS12520 IPR038476 UvrC homology region 2 superfamily THIMO_RS12520 IPR001162 UvrC family homology region THIMO_RS12520 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 THIMO_RS12525 IPR011006 CheY-like superfamily THIMO_RS12525 IPR016032 Signal transduction response regulator, C-terminal effector THIMO_RS12525 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS12525 IPR000792 Transcription regulator LuxR, C-terminal THIMO_RS12535 IPR009057 Homeobox-like domain superfamily THIMO_RS12535 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 THIMO_RS12535 IPR001584 Integrase, catalytic core THIMO_RS12535 IPR017895 Helix-turn-helix, IS408/IS1162 transposase-type THIMO_RS12535 IPR012337 Ribonuclease H-like superfamily THIMO_RS12535 IPR011991 ArsR-like helix-turn-helix domain THIMO_RS12565 IPR029054 dUTPase-like THIMO_RS12565 IPR033704 dUTPase, trimeric THIMO_RS12565 IPR036157 dUTPase-like superfamily THIMO_RS12565 IPR011962 dCTP deaminase THIMO_RS12570 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal THIMO_RS12570 IPR000146 Fructose-1,6-bisphosphatase class 1 THIMO_RS12570 IPR028343 Fructose-1,6-bisphosphatase THIMO_RS12585 IPR002549 Transmembrane protein TqsA-like THIMO_RS12595 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS12595 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS12595 IPR000847 Transcription regulator HTH, LysR THIMO_RS12595 IPR005119 LysR, substrate-binding THIMO_RS12605 IPR032836 DsrE2-like family THIMO_RS12605 IPR027396 DsrEFH-like THIMO_RS12610 IPR001455 TusA-like domain THIMO_RS12610 IPR036868 TusA-like domain superfamily THIMO_RS12615 IPR001763 Rhodanese-like domain THIMO_RS12615 IPR036873 Rhodanese-like domain superfamily THIMO_RS12620 IPR014777 Tetrapyrrole methylase, subdomain 1 THIMO_RS12620 IPR000878 Tetrapyrrole methylase THIMO_RS12620 IPR035996 Tetrapyrrole methylase superfamily THIMO_RS12620 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site THIMO_RS12620 IPR006367 Sirohaem synthase, N-terminal THIMO_RS12620 IPR014776 Tetrapyrrole methylase, subdomain 2 THIMO_RS12620 IPR019478 Sirohaem synthase, dimerisation domain THIMO_RS12620 IPR028281 Siroheme synthase, central domain THIMO_RS12620 IPR012409 Sirohaem synthase THIMO_RS12620 IPR037115 Sirohaem synthase, dimerisation domain superfamily THIMO_RS12620 IPR036291 NAD(P)-binding domain superfamily THIMO_RS12620 IPR006366 Uroporphyrin-III C-methyltransferase THIMO_RS12625 IPR003824 Undecaprenyl-diphosphatase UppP THIMO_RS12630 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme THIMO_RS12630 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS12630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS12630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS12630 IPR006234 O-succinylhomoserine sulfhydrylase THIMO_RS12635 IPR035584 Amidophosphoribosyltransferase, N-terminal THIMO_RS12635 IPR017932 Glutamine amidotransferase type 2 domain THIMO_RS12635 IPR029057 Phosphoribosyltransferase-like THIMO_RS12635 IPR000836 Phosphoribosyltransferase domain THIMO_RS12635 IPR029055 Nucleophile aminohydrolases, N-terminal THIMO_RS12635 IPR005854 Amidophosphoribosyltransferase THIMO_RS12640 IPR003825 Colicin V production, CvpA THIMO_RS12650 IPR001645 Folylpolyglutamate synthetase THIMO_RS12650 IPR013221 Mur ligase, central THIMO_RS12650 IPR036615 Mur ligase, C-terminal domain superfamily THIMO_RS12650 IPR004101 Mur ligase, C-terminal THIMO_RS12650 IPR036565 Mur-like, catalytic domain superfamily THIMO_RS12650 IPR018109 Folylpolyglutamate synthetase, conserved site THIMO_RS12655 IPR034733 Acetyl-CoA carboxylase THIMO_RS12655 IPR041010 Acetyl-coA carboxylase zinc finger domain THIMO_RS12655 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal THIMO_RS12655 IPR029045 ClpP/crotonase-like domain superfamily THIMO_RS12655 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit THIMO_RS12660 IPR011060 Ribulose-phosphate binding barrel THIMO_RS12660 IPR018204 Tryptophan synthase, alpha chain, active site THIMO_RS12660 IPR002028 Tryptophan synthase, alpha chain THIMO_RS12660 IPR013785 Aldolase-type TIM barrel THIMO_RS12665 IPR006653 Tryptophan synthase, beta chain, conserved site THIMO_RS12665 IPR006654 Tryptophan synthase, beta chain THIMO_RS12665 IPR023026 Tryptophan synthase beta chain/beta chain-like THIMO_RS12665 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme THIMO_RS12665 IPR001926 Pyridoxal-phosphate dependent enzyme THIMO_RS12670 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) THIMO_RS12670 IPR011060 Ribulose-phosphate binding barrel THIMO_RS12670 IPR013785 Aldolase-type TIM barrel THIMO_RS12675 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain THIMO_RS12675 IPR001406 Pseudouridine synthase I, TruA THIMO_RS12675 IPR020103 Pseudouridine synthase, catalytic domain superfamily THIMO_RS12675 IPR020095 Pseudouridine synthase I, TruA, C-terminal THIMO_RS12680 IPR038440 FimV, C-terminal domain superfamily THIMO_RS12680 IPR011990 Tetratricopeptide-like helical domain superfamily THIMO_RS12680 IPR020011 Motility protein FimV, C-terminal THIMO_RS12680 IPR018392 LysM domain THIMO_RS12680 IPR020012 Motility protein FimV, N-terminal THIMO_RS12680 IPR036779 LysM domain superfamily THIMO_RS12685 IPR036291 NAD(P)-binding domain superfamily THIMO_RS12685 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type THIMO_RS12685 IPR012080 Aspartate-semialdehyde dehydrogenase THIMO_RS12685 IPR000534 Semialdehyde dehydrogenase, NAD-binding THIMO_RS12685 IPR012280 Semialdehyde dehydrogenase, dimerisation domain THIMO_RS12685 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site THIMO_RS12690 IPR004429 Isopropylmalate dehydrogenase THIMO_RS12690 IPR024084 Isopropylmalate dehydrogenase-like domain THIMO_RS12690 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site THIMO_RS12695 IPR004431 3-isopropylmalate dehydratase, small subunit THIMO_RS12695 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel THIMO_RS12695 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain THIMO_RS12695 IPR033940 3-isopropylmalate dehydratase, swivel domain THIMO_RS12700 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain THIMO_RS12700 IPR004430 3-isopropylmalate dehydratase, large subunit THIMO_RS12700 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 THIMO_RS12700 IPR033941 3-Isopropylmalate dehydratase, catalytic domain THIMO_RS12700 IPR036008 Aconitase, iron-sulfur domain THIMO_RS12700 IPR018136 Aconitase family, 4Fe-4S cluster binding site THIMO_RS12705 IPR002583 Ribosomal protein S20 THIMO_RS12705 IPR036510 Ribosomal protein S20 superfamily THIMO_RS12730 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12730 IPR025669 AAA domain THIMO_RS12730 IPR005702 Exopolysaccharide synthesis protein THIMO_RS12755 IPR025948 HTH-like domain THIMO_RS12755 IPR001584 Integrase, catalytic core THIMO_RS12755 IPR012337 Ribonuclease H-like superfamily THIMO_RS12755 IPR036397 Ribonuclease H superfamily THIMO_RS12770 IPR000715 Glycosyl transferase, family 4 THIMO_RS12770 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site THIMO_RS12775 IPR005656 MmgE/PrpD THIMO_RS12775 IPR042188 MmgE/PrpD superfamily, domain 2 THIMO_RS12775 IPR042183 MmgE/PrpD superfamily, domain 1 THIMO_RS12775 IPR036148 MmgE/PrpD superfamily THIMO_RS12775 IPR012705 2-methylcitrate dehydratase PrpD THIMO_RS12780 IPR002020 Citrate synthase THIMO_RS12780 IPR016142 Citrate synthase-like, large alpha subdomain THIMO_RS12780 IPR011278 2-methylcitrate synthase/citrate synthase type I THIMO_RS12780 IPR016143 Citrate synthase-like, small alpha subdomain THIMO_RS12780 IPR019810 Citrate synthase active site THIMO_RS12780 IPR036969 Citrate synthase superfamily THIMO_RS12780 IPR024176 Citrate synthase, bacterial-type THIMO_RS12785 IPR039556 ICL/PEPM domain THIMO_RS12785 IPR040442 Pyruvate kinase-like domain superfamily THIMO_RS12785 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THIMO_RS12785 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site THIMO_RS12785 IPR012695 2-methylisocitrate lyase THIMO_RS12790 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS12790 IPR011711 GntR, C-terminal THIMO_RS12790 IPR000485 AsnC-type HTH domain THIMO_RS12790 IPR008920 Transcription regulator FadR/GntR, C-terminal THIMO_RS12790 IPR000524 Transcription regulator HTH, GntR THIMO_RS12790 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS12795 IPR000873 AMP-dependent synthetase/ligase THIMO_RS12795 IPR020845 AMP-binding, conserved site THIMO_RS12795 IPR042099 AMP-dependent synthetase-like superfamily THIMO_RS12795 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain THIMO_RS12795 IPR025110 AMP-binding enzyme, C-terminal domain THIMO_RS12820 IPR012090 Chromosome partition protein MukB THIMO_RS12820 IPR032520 MukB, hinge domain THIMO_RS12820 IPR007406 MukB, N-terminal domain THIMO_RS12820 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12850 IPR000160 GGDEF domain THIMO_RS12850 IPR029787 Nucleotide cyclase THIMO_RS12850 IPR035919 EAL domain superfamily THIMO_RS12850 IPR005330 MHYT domain THIMO_RS12850 IPR001633 EAL domain THIMO_RS12860 IPR023346 Lysozyme-like domain superfamily THIMO_RS12860 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily THIMO_RS12860 IPR012289 Lytic transglycosylase, superhelical linker THIMO_RS12860 IPR000189 Prokaryotic transglycosylase, active site THIMO_RS12860 IPR008939 Lytic transglycosylase, superhelical U-shaped THIMO_RS12860 IPR008258 Transglycosylase SLT domain 1 THIMO_RS12875 IPR025403 Domain of unknown function DUF4129 THIMO_RS12875 IPR002931 Transglutaminase-like THIMO_RS12875 IPR038765 Papain-like cysteine peptidase superfamily THIMO_RS12875 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal THIMO_RS12885 IPR013780 Glycosyl hydrolase, all-beta THIMO_RS12885 IPR017853 Glycoside hydrolase superfamily THIMO_RS12885 IPR006047 Glycosyl hydrolase, family 13, catalytic domain THIMO_RS12890 IPR003615 HNH nuclease THIMO_RS12890 IPR002711 HNH endonuclease THIMO_RS12895 IPR036909 Cytochrome c-like domain superfamily THIMO_RS12895 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase THIMO_RS12895 IPR004852 Di-haem cytochrome c peroxidase THIMO_RS12895 IPR009056 Cytochrome c-like domain THIMO_RS12905 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily THIMO_RS12905 IPR005940 Anthranilate phosphoribosyl transferase THIMO_RS12905 IPR000312 Glycosyl transferase, family 3 THIMO_RS12905 IPR017459 Glycosyl transferase family 3, N-terminal domain THIMO_RS12905 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily THIMO_RS12910 IPR017941 Rieske [2Fe-2S] iron-sulphur domain THIMO_RS12910 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily THIMO_RS12935 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS12935 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS12935 IPR016454 Cysteine desulfurase THIMO_RS12935 IPR010240 Cysteine desulfurase IscS THIMO_RS12935 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site THIMO_RS12935 IPR000192 Aminotransferase class V domain THIMO_RS12935 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS12950 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12950 IPR038729 Rad50/SbcC-type AAA domain THIMO_RS12965 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12965 IPR038729 Rad50/SbcC-type AAA domain THIMO_RS12985 IPR001650 Helicase, C-terminal THIMO_RS12985 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS12985 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal THIMO_RS12985 IPR013670 EcoEI R protein C-terminal domain THIMO_RS12985 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS12985 IPR006935 Helicase/UvrB, N-terminal THIMO_RS13035 IPR023353 LemA-like domain superfamily THIMO_RS13035 IPR007156 LemA THIMO_RS13045 IPR003593 AAA+ ATPase domain THIMO_RS13045 IPR041445 RuvB, AAA lid domain THIMO_RS13045 IPR004605 DNA helicase, Holliday junction RuvB-type THIMO_RS13045 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13045 IPR008824 RuvB-like P-loop domain THIMO_RS13045 IPR008823 RuvB C-terminal winged helix domain THIMO_RS13045 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS13045 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS13055 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 THIMO_RS13055 IPR038770 Sodium/solute symporter superfamily THIMO_RS13055 IPR004710 Bile acid:sodium symporter THIMO_RS13060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS13060 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS13060 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS13060 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase THIMO_RS13060 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme THIMO_RS13065 IPR005886 UDP-glucose 4-epimerase THIMO_RS13065 IPR001509 NAD-dependent epimerase/dehydratase THIMO_RS13065 IPR036291 NAD(P)-binding domain superfamily THIMO_RS13080 IPR003682 rRNA small subunit methyltransferase G THIMO_RS13080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS13095 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS13095 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS13095 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS13095 IPR004839 Aminotransferase, class I/classII THIMO_RS13095 IPR005861 Histidinol-phosphate aminotransferase family THIMO_RS13100 IPR016161 Aldehyde/histidinol dehydrogenase THIMO_RS13100 IPR001692 Histidinol dehydrogenase, conserved site THIMO_RS13100 IPR022695 Histidinol dehydrogenase, monofunctional THIMO_RS13100 IPR012131 Histidinol dehydrogenase THIMO_RS13105 IPR018198 ATP phosphoribosyltransferase, conserved site THIMO_RS13105 IPR013820 ATP phosphoribosyltransferase, catalytic domain THIMO_RS13105 IPR001348 ATP phosphoribosyltransferase HisG THIMO_RS13105 IPR024893 ATP phosphoribosyltransferase HisG, short form THIMO_RS13110 IPR036968 Enolpyruvate transferase domain superfamily THIMO_RS13110 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta THIMO_RS13110 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase THIMO_RS13110 IPR001986 Enolpyruvate transferase domain THIMO_RS13125 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD THIMO_RS13125 IPR003399 Mce/MlaD THIMO_RS13130 IPR003453 ABC transport permease subunit MlaE, Proteobacteria THIMO_RS13130 IPR030802 ABC transporter permease MalE THIMO_RS13135 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl THIMO_RS13135 IPR017871 ABC transporter, conserved site THIMO_RS13135 IPR003439 ABC transporter-like THIMO_RS13135 IPR003593 AAA+ ATPase domain THIMO_RS13135 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13140 IPR001347 Sugar isomerase (SIS) THIMO_RS13140 IPR035474 KpsF-like, SIS domain THIMO_RS13140 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type THIMO_RS13140 IPR000644 CBS domain THIMO_RS13145 IPR010023 KdsC family THIMO_RS13145 IPR036412 HAD-like superfamily THIMO_RS13145 IPR023214 HAD superfamily THIMO_RS13160 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal THIMO_RS13160 IPR030921 LPS export ABC transporter, ATP-binding protein LptB THIMO_RS13160 IPR017871 ABC transporter, conserved site THIMO_RS13160 IPR003593 AAA+ ATPase domain THIMO_RS13160 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13160 IPR003439 ABC transporter-like THIMO_RS13165 IPR007634 RNA polymerase sigma factor 54, DNA-binding THIMO_RS13165 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily THIMO_RS13165 IPR007046 RNA polymerase sigma factor 54, core-binding domain THIMO_RS13165 IPR000394 RNA polymerase sigma factor 54 THIMO_RS13170 IPR003489 Ribosome hibernation promoting factor/RaiA THIMO_RS13170 IPR036567 Ribosome hibernation promotion factor-like THIMO_RS13175 IPR002178 PTS EIIA type-2 domain THIMO_RS13175 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN THIMO_RS13175 IPR016152 Phosphotransferase/anion transporter THIMO_RS13180 IPR005337 RapZ-like family THIMO_RS13180 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13190 IPR002114 Phosphotransferase system, HPr serine phosphorylation site THIMO_RS13190 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site THIMO_RS13190 IPR035895 HPr-like superfamily THIMO_RS13190 IPR000032 Phosphocarrier protein HPr-like THIMO_RS13195 IPR036618 PtsI, HPr-binding domain superfamily THIMO_RS13195 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THIMO_RS13195 IPR008731 Phosphotransferase system, enzyme I N-terminal THIMO_RS13195 IPR006318 Phosphotransferase system, enzyme I-like THIMO_RS13195 IPR024692 Phosphotransferase system, enzyme I THIMO_RS13195 IPR036637 Phosphohistidine domain superfamily THIMO_RS13195 IPR018274 PEP-utilising enzyme, active site THIMO_RS13195 IPR008279 PEP-utilising enzyme, mobile domain THIMO_RS13195 IPR040442 Pyruvate kinase-like domain superfamily THIMO_RS13195 IPR023151 PEP-utilising enzyme, conserved site THIMO_RS13195 IPR000121 PEP-utilising enzyme, C-terminal THIMO_RS13200 IPR035965 PAS domain superfamily THIMO_RS13200 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS13200 IPR009057 Homeobox-like domain superfamily THIMO_RS13200 IPR000014 PAS domain THIMO_RS13200 IPR011785 Transcription regulator PpsR THIMO_RS13205 IPR022571 Magnesium chelatase, subunit H, N-terminal THIMO_RS13205 IPR003672 CobN/magnesium chelatase THIMO_RS13210 IPR005652 Photosynthetic reaction centre, H subunit THIMO_RS13210 IPR015810 Photosynthetic reaction centre, H subunit, N-terminal THIMO_RS13210 IPR037097 Photosynthetic reaction centre, H subunit, N-terminal domain superfamily THIMO_RS13210 IPR027275 PRC-barrel domain THIMO_RS13210 IPR011033 PRC-barrel-like superfamily THIMO_RS13210 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal THIMO_RS13215 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 THIMO_RS13215 IPR003033 SCP2 sterol-binding domain THIMO_RS13215 IPR036527 SCP2 sterol-binding domain superfamily THIMO_RS13215 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT THIMO_RS13220 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain THIMO_RS13220 IPR020605 Octanoyltransferase, conserved site THIMO_RS13220 IPR000544 Octanoyltransferase THIMO_RS13225 IPR012338 Beta-lactamase/transpeptidase-like THIMO_RS13225 IPR015956 Penicillin-binding protein, C-terminal domain superfamily THIMO_RS13225 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily THIMO_RS13225 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A THIMO_RS13225 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal THIMO_RS13225 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal THIMO_RS13230 IPR036908 RlpA-like domain superfamily THIMO_RS13230 IPR009009 RlpA-like protein, double-psi beta-barrel domain THIMO_RS13230 IPR034718 Endolytic peptidoglycan transglycosylase RlpA THIMO_RS13230 IPR036680 Sporulation-like domain superfamily THIMO_RS13230 IPR007730 Sporulation-like domain THIMO_RS13230 IPR012997 Rare lipoprotein A THIMO_RS13235 IPR011757 Lytic transglycosylase MltB THIMO_RS13235 IPR031304 Transglycosylase SLT domain 2 THIMO_RS13235 IPR023346 Lysozyme-like domain superfamily THIMO_RS13240 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB THIMO_RS13240 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site THIMO_RS13240 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA THIMO_RS13245 IPR017790 Penicillin-binding protein 2 THIMO_RS13245 IPR001460 Penicillin-binding protein, transpeptidase THIMO_RS13245 IPR036138 Penicillin-binding protein, dimerisation domain superfamily THIMO_RS13245 IPR005311 Penicillin-binding protein, dimerisation domain THIMO_RS13245 IPR012338 Beta-lactamase/transpeptidase-like THIMO_RS13250 IPR007227 Cell shape-determining protein MreD THIMO_RS13250 IPR026034 Cell shape-determining protein MreD, proteobacterial type THIMO_RS13255 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 THIMO_RS13255 IPR007221 Rod shape-determining protein MreC THIMO_RS13255 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 THIMO_RS13260 IPR004753 Cell shape determining protein MreB THIMO_RS13265 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C THIMO_RS13265 IPR003837 Glu-tRNAGln amidotransferase C subunit THIMO_RS13270 IPR023631 Amidase signature domain THIMO_RS13270 IPR000120 Amidase THIMO_RS13270 IPR020556 Amidase, conserved site THIMO_RS13270 IPR036928 Amidase signature (AS) superfamily THIMO_RS13270 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit THIMO_RS13275 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 THIMO_RS13275 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain THIMO_RS13275 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit THIMO_RS13275 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E THIMO_RS13275 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic THIMO_RS13275 IPR018027 Asn/Gln amidotransferase THIMO_RS13275 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like THIMO_RS13275 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 THIMO_RS13275 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site THIMO_RS13280 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN THIMO_RS13280 IPR023404 Radical SAM, alpha/beta horseshoe THIMO_RS13280 IPR007197 Radical SAM THIMO_RS13280 IPR010723 HemN, C-terminal THIMO_RS13280 IPR034505 Anaerobic coproporphyrinogen-III oxidase THIMO_RS13280 IPR006638 Elp3/MiaB/NifB THIMO_RS13285 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily THIMO_RS13285 IPR010249 Bacteriochlorophyll 4-vinyl reductase THIMO_RS13285 IPR004096 4-vinyl reductase, 4VR THIMO_RS13295 IPR013651 ATP-grasp fold, RimK-type THIMO_RS13295 IPR011761 ATP-grasp fold THIMO_RS13295 IPR006037 Regulator of K+ conductance, C-terminal THIMO_RS13295 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily THIMO_RS13295 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS13295 IPR041107 RimK, PreATP-grasp domain THIMO_RS13295 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX THIMO_RS13305 IPR002933 Peptidase M20 THIMO_RS13305 IPR010169 Acetylornithine deacetylase ArgE THIMO_RS13305 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site THIMO_RS13305 IPR036264 Bacterial exopeptidase dimerisation domain THIMO_RS13305 IPR011650 Peptidase M20, dimerisation domain THIMO_RS13310 IPR035649 EFG, domain V THIMO_RS13310 IPR000640 Elongation factor EFG, domain V-like THIMO_RS13310 IPR004161 Translation elongation factor EFTu-like, domain 2 THIMO_RS13310 IPR009022 Elongation factor G, domain III THIMO_RS13310 IPR009000 Translation protein, beta-barrel domain superfamily THIMO_RS13310 IPR000795 Transcription factor, GTP-binding domain THIMO_RS13310 IPR004540 Translation elongation factor EFG/EF2 THIMO_RS13310 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS13310 IPR041095 Elongation Factor G, domain II THIMO_RS13310 IPR005225 Small GTP-binding protein domain THIMO_RS13310 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS13310 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13310 IPR031157 Tr-type G domain, conserved site THIMO_RS13310 IPR005517 Translation elongation factor EFG/EF2, domain IV THIMO_RS13310 IPR035647 EF-G domain III/V-like THIMO_RS13330 IPR002898 MotA/TolQ/ExbB proton channel THIMO_RS13355 IPR000522 ABC transporter, permease protein, BtuC-like THIMO_RS13355 IPR037294 ABC transporter, BtuC-like THIMO_RS13365 IPR017871 ABC transporter, conserved site THIMO_RS13365 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13365 IPR003593 AAA+ ATPase domain THIMO_RS13365 IPR003439 ABC transporter-like THIMO_RS13370 IPR033966 RuBisCO THIMO_RS13370 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal THIMO_RS13370 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily THIMO_RS13370 IPR036422 RuBisCO large subunit, N-terminal domain superfamily THIMO_RS13375 IPR009056 Cytochrome c-like domain THIMO_RS13375 IPR024167 Cytochrome c4-like THIMO_RS13375 IPR036909 Cytochrome c-like domain superfamily THIMO_RS13380 IPR024167 Cytochrome c4-like THIMO_RS13380 IPR036909 Cytochrome c-like domain superfamily THIMO_RS13380 IPR009056 Cytochrome c-like domain THIMO_RS13390 IPR011031 Multihaem cytochrome THIMO_RS13390 IPR020015 Decaheme cytochrome, c-type, DmsE THIMO_RS13390 IPR010177 Doubled CXXCH motif THIMO_RS13390 IPR036280 Multiheme cytochrome superfamily THIMO_RS13400 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal THIMO_RS13400 IPR013321 Arc-type ribbon-helix-helix THIMO_RS13400 IPR002145 Ribbon-helix-helix protein, CopG THIMO_RS13400 IPR022988 Nickel-responsive transcriptional regulator NikR THIMO_RS13400 IPR010985 Ribbon-helix-helix THIMO_RS13400 IPR014864 Transcription factor, NikR, nickel binding C-terminal THIMO_RS13415 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal THIMO_RS13415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS13415 IPR035909 Methylesterase CheB, C-terminal THIMO_RS13415 IPR013656 PAS fold-4 THIMO_RS13415 IPR000014 PAS domain THIMO_RS13415 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal THIMO_RS13415 IPR000780 MCP methyltransferase, CheR-type THIMO_RS13415 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase THIMO_RS13415 IPR035965 PAS domain superfamily THIMO_RS13420 IPR000160 GGDEF domain THIMO_RS13420 IPR029787 Nucleotide cyclase THIMO_RS13425 IPR036594 Methionine synthase domain THIMO_RS13425 IPR000551 MerR-type HTH domain THIMO_RS13425 IPR009061 Putative DNA-binding domain superfamily THIMO_RS13425 IPR036724 Cobalamin-binding domain superfamily THIMO_RS13425 IPR006158 Cobalamin (vitamin B12)-binding domain THIMO_RS13425 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain THIMO_RS13430 IPR006244 Photosystem I PsaB THIMO_RS13430 IPR006664 Outer membrane protein, bacterial THIMO_RS13430 IPR006665 OmpA-like domain THIMO_RS13430 IPR036408 Photosystem I PsaA/PsaB superfamily THIMO_RS13430 IPR020586 Photosystem I PsaA/PsaB, conserved site THIMO_RS13430 IPR001280 Photosystem I PsaA/PsaB THIMO_RS13430 IPR036737 OmpA-like domain superfamily THIMO_RS13435 IPR003593 AAA+ ATPase domain THIMO_RS13435 IPR011527 ABC transporter type 1, transmembrane domain THIMO_RS13435 IPR036640 ABC transporter type 1, transmembrane domain superfamily THIMO_RS13435 IPR039421 Type I protein exporter THIMO_RS13435 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13435 IPR011917 ABC transporter, lipid A export, MsbA THIMO_RS13435 IPR017871 ABC transporter, conserved site THIMO_RS13435 IPR003439 ABC transporter-like THIMO_RS13440 IPR000551 MerR-type HTH domain THIMO_RS13440 IPR009061 Putative DNA-binding domain superfamily THIMO_RS13445 IPR000119 Histone-like DNA-binding protein THIMO_RS13445 IPR005684 Integration host factor, alpha subunit THIMO_RS13445 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily THIMO_RS13445 IPR020816 Histone-like DNA-binding protein, conserved site THIMO_RS13450 IPR005146 B3/B4 tRNA-binding domain THIMO_RS13450 IPR009061 Putative DNA-binding domain superfamily THIMO_RS13450 IPR005121 Ferrodoxin-fold anticodon-binding domain THIMO_RS13450 IPR002547 tRNA-binding domain THIMO_RS13450 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain THIMO_RS13450 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS13450 IPR005147 tRNA synthetase, B5-domain THIMO_RS13450 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain THIMO_RS13450 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 THIMO_RS13450 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily THIMO_RS13450 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit THIMO_RS13455 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal THIMO_RS13455 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit THIMO_RS13455 IPR006195 Aminoacyl-tRNA synthetase, class II THIMO_RS13455 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial THIMO_RS13455 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm THIMO_RS13455 IPR002319 Phenylalanyl-tRNA synthetase THIMO_RS13460 IPR035566 Ribosomal protein L20, C-terminal THIMO_RS13460 IPR005813 Ribosomal protein L20 THIMO_RS13465 IPR021137 Ribosomal protein L35 THIMO_RS13465 IPR001706 Ribosomal protein L35, non-mitochondrial THIMO_RS13465 IPR018265 Ribosomal protein L35, conserved site THIMO_RS13465 IPR037229 Ribosomal protein L35 superfamily THIMO_RS13470 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily THIMO_RS13470 IPR001288 Translation initiation factor 3 THIMO_RS13470 IPR019815 Translation initiation factor 3, C-terminal THIMO_RS13470 IPR019814 Translation initiation factor 3, N-terminal THIMO_RS13470 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily THIMO_RS13470 IPR019813 Translation initiation factor 3, conserved site THIMO_RS13475 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) THIMO_RS13475 IPR004154 Anticodon-binding THIMO_RS13475 IPR036621 Anticodon-binding domain superfamily THIMO_RS13475 IPR012675 Beta-grasp domain superfamily THIMO_RS13475 IPR004095 TGS THIMO_RS13475 IPR012676 TGS-like THIMO_RS13475 IPR002320 Threonine-tRNA ligase, class IIa THIMO_RS13475 IPR012947 Threonyl/alanyl tRNA synthetase, SAD THIMO_RS13475 IPR033728 Threonine-tRNA ligase catalytic core domain THIMO_RS13475 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily THIMO_RS13475 IPR006195 Aminoacyl-tRNA synthetase, class II THIMO_RS13485 IPR020557 Fumarate lyase, conserved site THIMO_RS13485 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain THIMO_RS13485 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain THIMO_RS13485 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily THIMO_RS13485 IPR011167 Iron-dependent fumarate hydratase THIMO_RS13490 IPR014188 Acrylyl-CoA reductase AcuI THIMO_RS13490 IPR013149 Alcohol dehydrogenase, C-terminal THIMO_RS13490 IPR013154 Alcohol dehydrogenase, N-terminal THIMO_RS13490 IPR011032 GroES-like superfamily THIMO_RS13490 IPR036291 NAD(P)-binding domain superfamily THIMO_RS13490 IPR020843 Polyketide synthase, enoylreductase domain THIMO_RS13500 IPR000456 Ribosomal protein L17 THIMO_RS13500 IPR036373 Ribosomal protein L17 superfamily THIMO_RS13505 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type THIMO_RS13505 IPR036643 DNA-directed RNA polymerase, insert domain superfamily THIMO_RS13505 IPR011260 RNA polymerase, alpha subunit, C-terminal THIMO_RS13505 IPR036603 RNA polymerase, RBP11-like subunit THIMO_RS13505 IPR011773 DNA-directed RNA polymerase, alpha subunit THIMO_RS13505 IPR011262 DNA-directed RNA polymerase, insert domain THIMO_RS13510 IPR036986 RNA-binding S4 domain superfamily THIMO_RS13510 IPR002942 RNA-binding S4 domain THIMO_RS13510 IPR018079 Ribosomal protein S4, conserved site THIMO_RS13510 IPR005709 Ribosomal protein S4, bacterial-type THIMO_RS13510 IPR001912 Ribosomal protein S4/S9, N-terminal THIMO_RS13510 IPR022801 Ribosomal protein S4/S9 THIMO_RS13515 IPR036967 Ribosomal protein S11 superfamily THIMO_RS13515 IPR019981 Ribosomal protein S11, bacterial-type THIMO_RS13515 IPR018102 Ribosomal S11, conserved site THIMO_RS13515 IPR001971 Ribosomal protein S11 THIMO_RS13520 IPR018269 Ribosomal protein S13, conserved site THIMO_RS13520 IPR010979 Ribosomal protein S13-like, H2TH THIMO_RS13520 IPR001892 Ribosomal protein S13 THIMO_RS13520 IPR027437 30s ribosomal protein S13, C-terminal THIMO_RS13520 IPR019980 Ribosomal protein S13, bacterial-type THIMO_RS13525 IPR000473 Ribosomal protein L36 THIMO_RS13525 IPR035977 Ribosomal protein L36 superfamily THIMO_RS13530 IPR026593 Protein translocase subunit SecY THIMO_RS13530 IPR023201 SecY domain superfamily THIMO_RS13530 IPR030659 SecY conserved site THIMO_RS13530 IPR002208 SecY/SEC61-alpha family THIMO_RS13535 IPR030878 Ribosomal protein L15 THIMO_RS13535 IPR036227 Ribosomal L18e/L15P superfamily THIMO_RS13535 IPR005749 Ribosomal protein L15, bacterial-type THIMO_RS13535 IPR021131 Ribosomal protein L18e/L15P THIMO_RS13540 IPR005996 Ribosomal protein L30, bacterial-type THIMO_RS13540 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain THIMO_RS13540 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily THIMO_RS13545 IPR000851 Ribosomal protein S5 THIMO_RS13545 IPR018192 Ribosomal protein S5, N-terminal, conserved site THIMO_RS13545 IPR013810 Ribosomal protein S5, N-terminal THIMO_RS13545 IPR005712 Ribosomal protein S5, bacterial-type THIMO_RS13545 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS13545 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS13545 IPR005324 Ribosomal protein S5, C-terminal THIMO_RS13550 IPR005484 Ribosomal protein L18 THIMO_RS13550 IPR004389 Ribosomal protein L18, bacterial-type THIMO_RS13555 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily THIMO_RS13555 IPR002358 Ribosomal protein L6, conserved site THIMO_RS13555 IPR000702 Ribosomal protein L6 THIMO_RS13555 IPR019906 Ribosomal protein L6, bacterial-type THIMO_RS13555 IPR020040 Ribosomal protein L6, alpha-beta domain THIMO_RS13560 IPR035987 Ribosomal protein S8 superfamily THIMO_RS13560 IPR000630 Ribosomal protein S8 THIMO_RS13565 IPR018271 Ribosomal protein S14, conserved site THIMO_RS13565 IPR023036 Ribosomal protein S14, bacterial/plastid THIMO_RS13565 IPR001209 Ribosomal protein S14 THIMO_RS13570 IPR031309 Ribosomal protein L5, C-terminal THIMO_RS13570 IPR020929 Ribosomal protein L5, conserved site THIMO_RS13570 IPR031310 Ribosomal protein L5, N-terminal THIMO_RS13570 IPR020930 Ribosomal protein L5, bacterial-type THIMO_RS13570 IPR022803 Ribosomal protein L5 domain superfamily THIMO_RS13570 IPR002132 Ribosomal protein L5 THIMO_RS13575 IPR041988 Ribosomal Protein L26/L24, KOW domain THIMO_RS13575 IPR008991 Translation protein SH3-like domain superfamily THIMO_RS13575 IPR014722 Ribosomal protein L2, domain 2 THIMO_RS13575 IPR003256 Ribosomal protein L24 THIMO_RS13575 IPR005824 KOW THIMO_RS13580 IPR019972 Ribosomal protein L14P, conserved site THIMO_RS13580 IPR000218 Ribosomal protein L14P THIMO_RS13580 IPR036853 Ribosomal protein L14 superfamily THIMO_RS13580 IPR005745 Ribosomal protein L14P, bacterial-type THIMO_RS13585 IPR000266 Ribosomal protein S17/S11 THIMO_RS13585 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS13585 IPR019984 30S ribosomal protein S17 THIMO_RS13590 IPR036049 Ribosomal protein L29/L35 superfamily THIMO_RS13590 IPR001854 Ribosomal protein L29/L35 THIMO_RS13595 IPR016180 Ribosomal protein L10e/L16 THIMO_RS13595 IPR020798 Ribosomal protein L16, conserved site THIMO_RS13595 IPR000114 Ribosomal protein L16 THIMO_RS13595 IPR036920 Ribosomal protein L10e/L16 superfamily THIMO_RS13600 IPR001351 Ribosomal protein S3, C-terminal THIMO_RS13600 IPR005704 Ribosomal protein S3, bacterial-type THIMO_RS13600 IPR009019 K homology domain superfamily, prokaryotic type THIMO_RS13600 IPR004044 K Homology domain, type 2 THIMO_RS13600 IPR015946 K homology domain-like, alpha/beta THIMO_RS13600 IPR018280 Ribosomal protein S3, conserved site THIMO_RS13600 IPR004087 K Homology domain THIMO_RS13600 IPR036419 Ribosomal protein S3, C-terminal domain superfamily THIMO_RS13605 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type THIMO_RS13605 IPR001063 Ribosomal protein L22/L17 THIMO_RS13605 IPR018260 Ribosomal protein L22/L17, conserved site THIMO_RS13605 IPR036394 Ribosomal protein L22/L17 superfamily THIMO_RS13610 IPR002222 Ribosomal protein S19/S15 THIMO_RS13610 IPR020934 Ribosomal protein S19 conserved site THIMO_RS13610 IPR005732 Ribosomal protein S19, bacterial-type THIMO_RS13610 IPR023575 Ribosomal protein S19, superfamily THIMO_RS13615 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS13615 IPR022666 Ribosomal Proteins L2, RNA binding domain THIMO_RS13615 IPR022671 Ribosomal protein L2, conserved site THIMO_RS13615 IPR022669 Ribosomal protein L2, C-terminal THIMO_RS13615 IPR005880 Ribosomal protein L2, bacterial/organellar-type THIMO_RS13615 IPR002171 Ribosomal protein L2 THIMO_RS13615 IPR014722 Ribosomal protein L2, domain 2 THIMO_RS13615 IPR008991 Translation protein SH3-like domain superfamily THIMO_RS13615 IPR014726 Ribosomal protein L2, domain 3 THIMO_RS13620 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily THIMO_RS13620 IPR012678 Ribosomal protein L23/L15e core domain superfamily THIMO_RS13620 IPR013025 Ribosomal protein L25/L23 THIMO_RS13625 IPR002136 Ribosomal protein L4/L1e THIMO_RS13625 IPR013005 50S ribosomal protein uL4 THIMO_RS13625 IPR023574 Ribosomal protein L4 domain superfamily THIMO_RS13630 IPR009000 Translation protein, beta-barrel domain superfamily THIMO_RS13630 IPR019926 Ribosomal protein L3, conserved site THIMO_RS13630 IPR019927 Ribosomal protein L3, bacterial/organelle-type THIMO_RS13630 IPR000597 Ribosomal protein L3 THIMO_RS13635 IPR001848 Ribosomal protein S10 THIMO_RS13635 IPR027486 Ribosomal protein S10 domain THIMO_RS13635 IPR036838 Ribosomal protein S10 domain superfamily THIMO_RS13640 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal THIMO_RS13640 IPR000795 Transcription factor, GTP-binding domain THIMO_RS13640 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain THIMO_RS13640 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal THIMO_RS13640 IPR009000 Translation protein, beta-barrel domain superfamily THIMO_RS13640 IPR033720 Elongation factor Tu, domain 2 THIMO_RS13640 IPR031157 Tr-type G domain, conserved site THIMO_RS13640 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13640 IPR005225 Small GTP-binding protein domain THIMO_RS13640 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle THIMO_RS13640 IPR004161 Translation elongation factor EFTu-like, domain 2 THIMO_RS13645 IPR004161 Translation elongation factor EFTu-like, domain 2 THIMO_RS13645 IPR000640 Elongation factor EFG, domain V-like THIMO_RS13645 IPR009000 Translation protein, beta-barrel domain superfamily THIMO_RS13645 IPR004540 Translation elongation factor EFG/EF2 THIMO_RS13645 IPR005517 Translation elongation factor EFG/EF2, domain IV THIMO_RS13645 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS13645 IPR035647 EF-G domain III/V-like THIMO_RS13645 IPR035649 EFG, domain V THIMO_RS13645 IPR000795 Transcription factor, GTP-binding domain THIMO_RS13645 IPR009022 Elongation factor G, domain III THIMO_RS13645 IPR005225 Small GTP-binding protein domain THIMO_RS13645 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS13645 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13645 IPR031157 Tr-type G domain, conserved site THIMO_RS13645 IPR041095 Elongation Factor G, domain II THIMO_RS13650 IPR023798 Ribosomal protein S7 domain THIMO_RS13650 IPR000235 Ribosomal protein S5/S7 THIMO_RS13650 IPR036823 Ribosomal protein S7 domain superfamily THIMO_RS13650 IPR005717 Ribosomal protein S7, bacterial/organellar-type THIMO_RS13655 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS13655 IPR005679 Ribosomal protein S12, bacterial-type THIMO_RS13655 IPR006032 Ribosomal protein S12/S23 THIMO_RS13660 IPR007066 RNA polymerase Rpb1, domain 3 THIMO_RS13660 IPR042102 RNA polymerase Rpb1, domain 3 superfamily THIMO_RS13660 IPR007081 RNA polymerase Rpb1, domain 5 THIMO_RS13660 IPR038120 RNA polymerase Rpb1, funnel domain superfamily THIMO_RS13660 IPR006592 RNA polymerase, N-terminal THIMO_RS13660 IPR000722 RNA polymerase, alpha subunit THIMO_RS13660 IPR007080 RNA polymerase Rpb1, domain 1 THIMO_RS13660 IPR012754 DNA-directed RNA polymerase, subunit beta-prime THIMO_RS13660 IPR007083 RNA polymerase Rpb1, domain 4 THIMO_RS13665 IPR037034 RNA polymerase Rpb2, domain 2 superfamily THIMO_RS13665 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily THIMO_RS13665 IPR014724 RNA polymerase Rpb2, OB-fold THIMO_RS13665 IPR007642 RNA polymerase Rpb2, domain 2 THIMO_RS13665 IPR007644 RNA polymerase, beta subunit, protrusion THIMO_RS13665 IPR007121 RNA polymerase, beta subunit, conserved site THIMO_RS13665 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type THIMO_RS13665 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain THIMO_RS13665 IPR015712 DNA-directed RNA polymerase, subunit 2 THIMO_RS13665 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain THIMO_RS13665 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily THIMO_RS13665 IPR007641 RNA polymerase Rpb2, domain 7 THIMO_RS13665 IPR007645 RNA polymerase Rpb2, domain 3 THIMO_RS13670 IPR000206 Ribosomal protein L7/L12 THIMO_RS13670 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like THIMO_RS13670 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily THIMO_RS13670 IPR008932 Ribosomal protein L7/L12, oligomerisation THIMO_RS13670 IPR013823 Ribosomal protein L7/L12, C-terminal THIMO_RS13675 IPR022973 Ribosomal protein L10 THIMO_RS13675 IPR001790 Ribosomal protein L10P THIMO_RS13675 IPR002363 Ribosomal protein L10, eubacterial, conserved site THIMO_RS13680 IPR023673 Ribosomal protein L1, conserved site THIMO_RS13680 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich THIMO_RS13680 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein THIMO_RS13680 IPR023674 Ribosomal protein L1-like THIMO_RS13680 IPR002143 Ribosomal protein L1 THIMO_RS13680 IPR005878 Ribosomal protein L1, bacterial-type THIMO_RS13685 IPR020785 Ribosomal protein L11, conserved site THIMO_RS13685 IPR036769 Ribosomal protein L11, C-terminal domain superfamily THIMO_RS13685 IPR020783 Ribosomal protein L11, C-terminal THIMO_RS13685 IPR006519 Ribosomal protein L11, bacterial-type THIMO_RS13685 IPR020784 Ribosomal protein L11, N-terminal THIMO_RS13685 IPR000911 Ribosomal protein L11/L12 THIMO_RS13685 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily THIMO_RS13690 IPR006645 NusG, N-terminal THIMO_RS13690 IPR036735 NusG, N-terminal domain superfamily THIMO_RS13690 IPR001062 Transcription antitermination protein, NusG THIMO_RS13690 IPR014722 Ribosomal protein L2, domain 2 THIMO_RS13690 IPR005824 KOW THIMO_RS13690 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site THIMO_RS13690 IPR008991 Translation protein SH3-like domain superfamily THIMO_RS13695 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit THIMO_RS13695 IPR005807 SecE subunit of protein translocation complex, bacterial-like THIMO_RS13695 IPR038379 SecE superfamily THIMO_RS13705 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain THIMO_RS13705 IPR004161 Translation elongation factor EFTu-like, domain 2 THIMO_RS13705 IPR033720 Elongation factor Tu, domain 2 THIMO_RS13705 IPR031157 Tr-type G domain, conserved site THIMO_RS13705 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13705 IPR000795 Transcription factor, GTP-binding domain THIMO_RS13705 IPR005225 Small GTP-binding protein domain THIMO_RS13705 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal THIMO_RS13705 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle THIMO_RS13705 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal THIMO_RS13705 IPR009000 Translation protein, beta-barrel domain superfamily THIMO_RS13725 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THIMO_RS13725 IPR017476 UDP-glucose/GDP-mannose dehydrogenase THIMO_RS13725 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal THIMO_RS13725 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily THIMO_RS13725 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation THIMO_RS13725 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal THIMO_RS13725 IPR036291 NAD(P)-binding domain superfamily THIMO_RS13725 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type THIMO_RS13745 IPR002686 Transposase IS200-like THIMO_RS13745 IPR036515 Transposase IS200-like superfamily THIMO_RS13755 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain THIMO_RS13755 IPR015943 WD40/YVTN repeat-like-containing domain superfamily THIMO_RS13755 IPR020472 G-protein beta WD-40 repeat THIMO_RS13755 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13755 IPR001680 WD40 repeat THIMO_RS13755 IPR036322 WD40-repeat-containing domain superfamily THIMO_RS13755 IPR017986 WD40-repeat-containing domain THIMO_RS13755 IPR019775 WD40 repeat, conserved site THIMO_RS13755 IPR038765 Papain-like cysteine peptidase superfamily THIMO_RS13755 IPR029030 Caspase-like domain superfamily THIMO_RS13760 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm THIMO_RS13760 IPR023165 rRNA adenine dimethylase-like THIMO_RS13760 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site THIMO_RS13760 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal THIMO_RS13760 IPR011530 Ribosomal RNA adenine dimethylase THIMO_RS13760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS13765 IPR003593 AAA+ ATPase domain THIMO_RS13765 IPR003959 ATPase, AAA-type, core THIMO_RS13765 IPR008268 Peptidase S16, active site THIMO_RS13765 IPR027543 Lon protease, bacterial THIMO_RS13765 IPR004815 Lon protease, bacterial/eukaryotic-type THIMO_RS13765 IPR008269 Peptidase S16, Lon proteolytic domain THIMO_RS13765 IPR027065 Lon protease THIMO_RS13765 IPR003111 Lon, substrate-binding domain THIMO_RS13765 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS13765 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS13765 IPR015947 PUA-like superfamily THIMO_RS13765 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13770 IPR001279 Metallo-beta-lactamase THIMO_RS13770 IPR002563 Flavin reductase like domain THIMO_RS13770 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THIMO_RS13770 IPR012349 FMN-binding split barrel THIMO_RS13770 IPR001226 Flavodoxin, conserved site THIMO_RS13770 IPR029039 Flavoprotein-like superfamily THIMO_RS13770 IPR008254 Flavodoxin/nitric oxide synthase THIMO_RS13775 IPR018209 Pyruvate kinase, active site THIMO_RS13775 IPR036918 Pyruvate kinase, C-terminal domain superfamily THIMO_RS13775 IPR040442 Pyruvate kinase-like domain superfamily THIMO_RS13775 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THIMO_RS13775 IPR001697 Pyruvate kinase THIMO_RS13775 IPR036637 Phosphohistidine domain superfamily THIMO_RS13775 IPR008279 PEP-utilising enzyme, mobile domain THIMO_RS13775 IPR015793 Pyruvate kinase, barrel THIMO_RS13775 IPR011037 Pyruvate kinase-like, insert domain superfamily THIMO_RS13775 IPR015795 Pyruvate kinase, C-terminal THIMO_RS13775 IPR015806 Pyruvate kinase, insert domain superfamily THIMO_RS13780 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS13780 IPR029058 Alpha/Beta hydrolase fold THIMO_RS13810 IPR006121 Heavy metal-associated domain, HMA THIMO_RS13810 IPR006122 Heavy metal-associated domain, copper ion-binding THIMO_RS13810 IPR017969 Heavy-metal-associated, conserved site THIMO_RS13810 IPR023214 HAD superfamily THIMO_RS13810 IPR036412 HAD-like superfamily THIMO_RS13810 IPR008250 P-type ATPase, A domain superfamily THIMO_RS13810 IPR023298 P-type ATPase, transmembrane domain superfamily THIMO_RS13810 IPR018303 P-type ATPase, phosphorylation site THIMO_RS13810 IPR023299 P-type ATPase, cytoplasmic domain N THIMO_RS13810 IPR027256 P-type ATPase, subfamily IB THIMO_RS13810 IPR036163 Heavy metal-associated domain superfamily THIMO_RS13810 IPR001757 P-type ATPase THIMO_RS13820 IPR036515 Transposase IS200-like superfamily THIMO_RS13820 IPR002686 Transposase IS200-like THIMO_RS13830 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site THIMO_RS13830 IPR000659 Pyridoxamine 5'-phosphate oxidase THIMO_RS13830 IPR012349 FMN-binding split barrel THIMO_RS13830 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal THIMO_RS13830 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative THIMO_RS13840 IPR011812 Biosynthetic peptidoglycan transglycosylase THIMO_RS13840 IPR036950 Penicillin binding protein transglycosylase domain THIMO_RS13840 IPR001264 Glycosyl transferase, family 51 THIMO_RS13840 IPR023346 Lysozyme-like domain superfamily THIMO_RS13875 IPR024953 Polyphosphate kinase middle domain THIMO_RS13875 IPR036830 Polyphosphate kinase middle domain superfamily THIMO_RS13875 IPR003414 Polyphosphate kinase THIMO_RS13875 IPR041108 Polyphosphate kinase, C-terminal domain 1 THIMO_RS13875 IPR025198 Polyphosphate kinase N-terminal domain THIMO_RS13875 IPR025200 Polyphosphate kinase C-terminal domain 2 THIMO_RS13875 IPR036832 Polyphosphate kinase N-terminal domain superfamily THIMO_RS13880 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS13880 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS13880 IPR007432 Protein of unknown function DUF480 THIMO_RS13885 IPR003848 Domain of unknown function DUF218 THIMO_RS13900 IPR008258 Transglycosylase SLT domain 1 THIMO_RS13900 IPR000189 Prokaryotic transglycosylase, active site THIMO_RS13900 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF THIMO_RS13900 IPR023703 Membrane-bound lytic murein transglycosylase F THIMO_RS13900 IPR023346 Lysozyme-like domain superfamily THIMO_RS13940 IPR002035 von Willebrand factor, type A THIMO_RS13940 IPR036465 von Willebrand factor A-like domain superfamily THIMO_RS13940 IPR022933 Uncharacterised protein family UPF0353 THIMO_RS13940 IPR024163 Aerotolerance regulator, N-terminal THIMO_RS13960 IPR041628 ChlI/MoxR, AAA lid domain THIMO_RS13960 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS13960 IPR011703 ATPase, AAA-3 THIMO_RS13965 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase THIMO_RS13965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS13970 IPR000060 BCCT transporter family THIMO_RS13985 IPR006665 OmpA-like domain THIMO_RS13985 IPR006690 Outer membrane protein, OmpA-like, conserved site THIMO_RS13985 IPR006664 Outer membrane protein, bacterial THIMO_RS13985 IPR036737 OmpA-like domain superfamily THIMO_RS13985 IPR039567 Glycine zipper domain THIMO_RS14000 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS14000 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS14000 IPR000847 Transcription regulator HTH, LysR THIMO_RS14000 IPR005119 LysR, substrate-binding THIMO_RS14005 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal THIMO_RS14005 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THIMO_RS14010 IPR018752 Uncharacterised protein family UPF0753 THIMO_RS14015 IPR033966 RuBisCO THIMO_RS14015 IPR036422 RuBisCO large subunit, N-terminal domain superfamily THIMO_RS14015 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal THIMO_RS14015 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily THIMO_RS14015 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal THIMO_RS14015 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site THIMO_RS14015 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I THIMO_RS14020 IPR000894 Ribulose bisphosphate carboxylase small chain, domain THIMO_RS14020 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily THIMO_RS14045 IPR000249 Microcompartment protein, bacteria THIMO_RS14045 IPR020808 Bacterial microcompartments protein, conserved site THIMO_RS14045 IPR037233 CcmK-like superfamily THIMO_RS14050 IPR037233 CcmK-like superfamily THIMO_RS14050 IPR000249 Microcompartment protein, bacteria THIMO_RS14050 IPR020808 Bacterial microcompartments protein, conserved site THIMO_RS14070 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS14070 IPR000847 Transcription regulator HTH, LysR THIMO_RS14070 IPR005119 LysR, substrate-binding THIMO_RS14070 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS14075 IPR037233 CcmK-like superfamily THIMO_RS14075 IPR000249 Microcompartment protein, bacteria THIMO_RS14090 IPR039421 Type I protein exporter THIMO_RS14090 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14090 IPR017871 ABC transporter, conserved site THIMO_RS14090 IPR003439 ABC transporter-like THIMO_RS14090 IPR036640 ABC transporter type 1, transmembrane domain superfamily THIMO_RS14090 IPR011527 ABC transporter type 1, transmembrane domain THIMO_RS14090 IPR003593 AAA+ ATPase domain THIMO_RS14100 IPR042268 Outer membrane protein assembly factor BamC, C-terminal THIMO_RS14100 IPR010653 NlpB/DapX lipoprotein THIMO_RS14100 IPR014524 Outer membrane protein assembly factor BamC THIMO_RS14105 IPR013785 Aldolase-type TIM barrel THIMO_RS14105 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA THIMO_RS14105 IPR002220 DapA-like THIMO_RS14105 IPR020625 Schiff base-forming aldolase, active site THIMO_RS14105 IPR020624 Schiff base-forming aldolase, conserved site THIMO_RS14110 IPR016867 Glycine cleavage system transcriptional repressor THIMO_RS14110 IPR002912 ACT domain THIMO_RS14115 IPR036249 Thioredoxin-like superfamily THIMO_RS14115 IPR013766 Thioredoxin domain THIMO_RS14115 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant THIMO_RS14115 IPR024706 Peroxiredoxin, AhpC-type THIMO_RS14120 IPR003714 PhoH-like protein THIMO_RS14120 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14120 IPR002716 PIN domain THIMO_RS14120 IPR029060 PIN-like domain superfamily THIMO_RS14125 IPR001853 DSBA-like thioredoxin domain THIMO_RS14125 IPR036249 Thioredoxin-like superfamily THIMO_RS14125 IPR013766 Thioredoxin domain THIMO_RS14125 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL THIMO_RS14125 IPR017937 Thioredoxin, conserved site THIMO_RS14130 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family THIMO_RS14130 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily THIMO_RS14135 IPR018317 Queuosine biosynthesis protein QueC THIMO_RS14135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS14140 IPR036291 NAD(P)-binding domain superfamily THIMO_RS14140 IPR029903 RmlD-like substrate binding domain THIMO_RS14140 IPR005913 dTDP-4-dehydrorhamnose reductase family THIMO_RS14145 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS14145 IPR011344 Single-stranded DNA-binding protein THIMO_RS14145 IPR000424 Primosome PriB/single-strand DNA-binding THIMO_RS14150 IPR036259 MFS transporter superfamily THIMO_RS14150 IPR020846 Major facilitator superfamily domain THIMO_RS14150 IPR011701 Major facilitator superfamily THIMO_RS14185 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS14185 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal THIMO_RS14185 IPR013785 Aldolase-type TIM barrel THIMO_RS14185 IPR023753 FAD/NAD(P)-binding domain THIMO_RS14195 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal THIMO_RS14195 IPR017871 ABC transporter, conserved site THIMO_RS14195 IPR003439 ABC transporter-like THIMO_RS14195 IPR003593 AAA+ ATPase domain THIMO_RS14195 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14205 IPR000066 Antenna complex, alpha/beta subunit THIMO_RS14205 IPR018332 Antenna complex, alpha subunit THIMO_RS14205 IPR035889 Light-harvesting complex THIMO_RS14205 IPR002361 Antenna complex, alpha subunit conserved site THIMO_RS14210 IPR000066 Antenna complex, alpha/beta subunit THIMO_RS14210 IPR002362 Antenna complex, beta subunit THIMO_RS14210 IPR035889 Light-harvesting complex THIMO_RS14210 IPR023623 Antenna complex, beta subunit, conserved site THIMO_RS14225 IPR023623 Antenna complex, beta subunit, conserved site THIMO_RS14225 IPR035889 Light-harvesting complex THIMO_RS14225 IPR002362 Antenna complex, beta subunit THIMO_RS14225 IPR000066 Antenna complex, alpha/beta subunit THIMO_RS14230 IPR018332 Antenna complex, alpha subunit THIMO_RS14230 IPR002361 Antenna complex, alpha subunit conserved site THIMO_RS14230 IPR035889 Light-harvesting complex THIMO_RS14230 IPR000066 Antenna complex, alpha/beta subunit THIMO_RS14235 IPR000066 Antenna complex, alpha/beta subunit THIMO_RS14235 IPR002362 Antenna complex, beta subunit THIMO_RS14235 IPR023623 Antenna complex, beta subunit, conserved site THIMO_RS14235 IPR035889 Light-harvesting complex THIMO_RS14245 IPR002362 Antenna complex, beta subunit THIMO_RS14245 IPR000066 Antenna complex, alpha/beta subunit THIMO_RS14245 IPR023623 Antenna complex, beta subunit, conserved site THIMO_RS14245 IPR035889 Light-harvesting complex THIMO_RS14250 IPR011031 Multihaem cytochrome THIMO_RS14250 IPR023119 Multihaem cytochrome, PRC subunit superfamily THIMO_RS14250 IPR003158 Photosynthetic reaction centre, cytochrome c subunit THIMO_RS14250 IPR036280 Multiheme cytochrome superfamily THIMO_RS14255 IPR005781 Photosynthetic reaction centre, M subunit THIMO_RS14255 IPR000484 Photosynthetic reaction centre, L/M THIMO_RS14255 IPR036854 Photosystem II protein D1/D2 superfamily THIMO_RS14260 IPR000484 Photosynthetic reaction centre, L/M THIMO_RS14260 IPR005871 Photosynthetic reaction centre, L subunit THIMO_RS14260 IPR036854 Photosystem II protein D1/D2 superfamily THIMO_RS14270 IPR023623 Antenna complex, beta subunit, conserved site THIMO_RS14270 IPR002362 Antenna complex, beta subunit THIMO_RS14270 IPR000066 Antenna complex, alpha/beta subunit THIMO_RS14270 IPR035889 Light-harvesting complex THIMO_RS14275 IPR018332 Antenna complex, alpha subunit THIMO_RS14275 IPR035889 Light-harvesting complex THIMO_RS14275 IPR002361 Antenna complex, alpha subunit conserved site THIMO_RS14275 IPR000066 Antenna complex, alpha/beta subunit THIMO_RS14280 IPR023623 Antenna complex, beta subunit, conserved site THIMO_RS14280 IPR002362 Antenna complex, beta subunit THIMO_RS14280 IPR035889 Light-harvesting complex THIMO_RS14280 IPR000066 Antenna complex, alpha/beta subunit THIMO_RS14285 IPR016209 Protochlorophyllide reductase, ChlB, light independent THIMO_RS14285 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal THIMO_RS14285 IPR000510 Nitrogenase/oxidoreductase, component 1 THIMO_RS14285 IPR010244 Chlorophyllide reductase subunit Z THIMO_RS14290 IPR016209 Protochlorophyllide reductase, ChlB, light independent THIMO_RS14290 IPR000510 Nitrogenase/oxidoreductase, component 1 THIMO_RS14290 IPR010245 Chlorophyllide reductase subunit Y THIMO_RS14295 IPR010246 Chlorophyllide reductase iron protein subunit X THIMO_RS14295 IPR030655 NifH/chlL conserved site THIMO_RS14295 IPR000392 NifH/frxC family THIMO_RS14295 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14300 IPR005903 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase THIMO_RS14300 IPR036291 NAD(P)-binding domain superfamily THIMO_RS14300 IPR011032 GroES-like superfamily THIMO_RS14305 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS14305 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain THIMO_RS14305 IPR016461 O-methyltransferase COMT-type THIMO_RS14305 IPR001077 O-methyltransferase domain THIMO_RS14305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS14310 IPR033749 Polyprenyl synthetase, conserved site THIMO_RS14310 IPR000092 Polyprenyl synthetase THIMO_RS14310 IPR008949 Isoprenoid synthase domain superfamily THIMO_RS14315 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS14315 IPR014105 Carotenoid/retinoid oxidoreductase THIMO_RS14315 IPR002937 Amine oxidase THIMO_RS14325 IPR002060 Squalene/phytoene synthase THIMO_RS14325 IPR019845 Squalene/phytoene synthase, conserved site THIMO_RS14325 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head THIMO_RS14325 IPR008949 Isoprenoid synthase domain superfamily THIMO_RS14330 IPR002937 Amine oxidase THIMO_RS14330 IPR014105 Carotenoid/retinoid oxidoreductase THIMO_RS14330 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS14330 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site THIMO_RS14335 IPR029058 Alpha/Beta hydrolase fold THIMO_RS14335 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS14335 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase THIMO_RS14340 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14340 IPR036465 von Willebrand factor A-like domain superfamily THIMO_RS14340 IPR002035 von Willebrand factor, type A THIMO_RS14340 IPR011776 Magnesium chelatase, ATPase subunit D THIMO_RS14340 IPR041628 ChlI/MoxR, AAA lid domain THIMO_RS14345 IPR003593 AAA+ ATPase domain THIMO_RS14345 IPR041628 ChlI/MoxR, AAA lid domain THIMO_RS14345 IPR011775 Magnesium chelatase, ATPase subunit I THIMO_RS14345 IPR000523 Magnesium chelatase ChlI domain THIMO_RS14345 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14350 IPR017496 Photosynthetic complex assembly protein 2, putative THIMO_RS14360 IPR005182 Domain of unknown function DUF304 THIMO_RS14365 IPR037097 Photosynthetic reaction centre, H subunit, N-terminal domain superfamily THIMO_RS14365 IPR027275 PRC-barrel domain THIMO_RS14365 IPR011033 PRC-barrel-like superfamily THIMO_RS14365 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal THIMO_RS14365 IPR005652 Photosynthetic reaction centre, H subunit THIMO_RS14365 IPR015810 Photosynthetic reaction centre, H subunit, N-terminal THIMO_RS14370 IPR036259 MFS transporter superfamily THIMO_RS14370 IPR004896 PucC-related THIMO_RS14370 IPR026036 PucC protein THIMO_RS14375 IPR010251 Magnesium-protoporphyrin IX methyltransferase THIMO_RS14375 IPR010940 Magnesium-protoporphyrin IX methyltransferase, C-terminal THIMO_RS14375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS14375 IPR007848 Methyltransferase small domain THIMO_RS14380 IPR005971 Light-independent protochlorophyllide reductase, iron-sulphur ATP-binding protein THIMO_RS14380 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14380 IPR030655 NifH/chlL conserved site THIMO_RS14380 IPR000392 NifH/frxC family THIMO_RS14385 IPR003672 CobN/magnesium chelatase THIMO_RS14385 IPR022571 Magnesium chelatase, subunit H, N-terminal THIMO_RS14390 IPR016209 Protochlorophyllide reductase, ChlB, light independent THIMO_RS14390 IPR005969 Light-independent protochlorophyllide reductase, B subunit THIMO_RS14390 IPR042298 Proto-chlorophyllide reductase, C-terminal THIMO_RS14390 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal THIMO_RS14390 IPR000510 Nitrogenase/oxidoreductase, component 1 THIMO_RS14395 IPR005970 Light-independent protochlorophyllide reductase, N subunit THIMO_RS14395 IPR000510 Nitrogenase/oxidoreductase, component 1 THIMO_RS14400 IPR009905 2-vinyl bacteriochlorophyllide hydratase THIMO_RS14405 IPR004472 Dethiobiotin synthase BioD THIMO_RS14405 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS14410 IPR013216 Methyltransferase type 11 THIMO_RS14410 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC THIMO_RS14415 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS14415 IPR029058 Alpha/Beta hydrolase fold THIMO_RS14415 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase THIMO_RS14420 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type THIMO_RS14420 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria THIMO_RS14420 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS14420 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS14420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS14420 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site THIMO_RS14420 IPR004839 Aminotransferase, class I/classII THIMO_RS14425 IPR010722 Biotin and thiamin synthesis-associated domain THIMO_RS14425 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB THIMO_RS14425 IPR007197 Radical SAM THIMO_RS14425 IPR006638 Elp3/MiaB/NifB THIMO_RS14425 IPR024177 Biotin synthase THIMO_RS14425 IPR013785 Aldolase-type TIM barrel THIMO_RS14430 IPR020103 Pseudouridine synthase, catalytic domain superfamily THIMO_RS14430 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F THIMO_RS14430 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site THIMO_RS14430 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain THIMO_RS14430 IPR006145 Pseudouridine synthase, RsuA/RluA THIMO_RS14445 IPR016292 Epoxide hydrolase THIMO_RS14445 IPR000639 Epoxide hydrolase-like THIMO_RS14445 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS14445 IPR029058 Alpha/Beta hydrolase fold THIMO_RS14450 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal THIMO_RS14450 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding THIMO_RS14450 IPR036291 NAD(P)-binding domain superfamily THIMO_RS14450 IPR019796 Glucose-6-phosphate dehydrogenase, active site THIMO_RS14450 IPR001282 Glucose-6-phosphate dehydrogenase THIMO_RS14455 IPR036291 NAD(P)-binding domain superfamily THIMO_RS14455 IPR006114 6-phosphogluconate dehydrogenase, C-terminal THIMO_RS14455 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding THIMO_RS14455 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THIMO_RS14455 IPR013328 6-phosphogluconate dehydrogenase, domain 2 THIMO_RS14455 IPR006183 6-phosphogluconate dehydrogenase THIMO_RS14455 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type THIMO_RS14460 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 THIMO_RS14460 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain THIMO_RS14460 IPR008141 Alanine dehydrogenase THIMO_RS14460 IPR036291 NAD(P)-binding domain superfamily THIMO_RS14460 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal THIMO_RS14470 IPR020575 Heat shock protein Hsp90, N-terminal THIMO_RS14470 IPR001404 Heat shock protein Hsp90 family THIMO_RS14470 IPR037196 HSP90, C-terminal domain THIMO_RS14470 IPR019805 Heat shock protein Hsp90, conserved site THIMO_RS14470 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS14470 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS14470 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS14475 IPR005841 Alpha-D-phosphohexomutase superfamily THIMO_RS14475 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II THIMO_RS14475 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III THIMO_RS14475 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I THIMO_RS14475 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily THIMO_RS14475 IPR005843 Alpha-D-phosphohexomutase, C-terminal THIMO_RS14475 IPR016066 Alpha-D-phosphohexomutase, conserved site THIMO_RS14475 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III THIMO_RS14480 IPR041569 AAA ATPase, AAA+ lid domain THIMO_RS14480 IPR003593 AAA+ ATPase domain THIMO_RS14480 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14480 IPR005936 Peptidase, FtsH THIMO_RS14480 IPR011546 Peptidase M41, FtsH extracellular THIMO_RS14480 IPR000642 Peptidase M41 THIMO_RS14480 IPR037219 Peptidase M41-like THIMO_RS14480 IPR003960 ATPase, AAA-type, conserved site THIMO_RS14480 IPR003959 ATPase, AAA-type, core THIMO_RS14490 IPR022927 RNA pyrophosphohydrolase RppH THIMO_RS14490 IPR000086 NUDIX hydrolase domain THIMO_RS14490 IPR020476 NUDIX hydrolase THIMO_RS14490 IPR020084 NUDIX hydrolase, conserved site THIMO_RS14490 IPR015797 NUDIX hydrolase-like domain superfamily THIMO_RS14495 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb THIMO_RS14495 IPR004524 Aspartate-tRNA ligase, type 1 THIMO_RS14495 IPR029351 GAD domain THIMO_RS14495 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS14495 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type THIMO_RS14495 IPR006195 Aminoacyl-tRNA synthetase, class II THIMO_RS14495 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) THIMO_RS14495 IPR004115 GAD-like domain superfamily THIMO_RS14510 IPR002737 MEMO1 family THIMO_RS14525 IPR011051 RmlC-like cupin domain superfamily THIMO_RS14525 IPR014710 RmlC-like jelly roll fold THIMO_RS14525 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related THIMO_RS14530 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS14530 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form THIMO_RS14530 IPR005835 Nucleotidyl transferase domain THIMO_RS14535 IPR016040 NAD(P)-binding domain THIMO_RS14535 IPR005888 dTDP-glucose 4,6-dehydratase THIMO_RS14535 IPR036291 NAD(P)-binding domain superfamily THIMO_RS14540 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase THIMO_RS14540 IPR003362 Bacterial sugar transferase THIMO_RS14540 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ THIMO_RS14550 IPR006009 N-acetylglucosaminyltransferase, MurG THIMO_RS14550 IPR007235 Glycosyl transferase, family 28, C-terminal THIMO_RS14550 IPR004276 Glycosyltransferase family 28, N-terminal domain THIMO_RS14570 IPR039552 Transposase IS66, C-terminal THIMO_RS14570 IPR004291 Transposase, IS66 THIMO_RS14570 IPR024474 Zinc-finger binding domain of transposase IS66 THIMO_RS14570 IPR024463 Transposase TnpC, homeodomain THIMO_RS14650 IPR011006 CheY-like superfamily THIMO_RS14650 IPR003593 AAA+ ATPase domain THIMO_RS14650 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS14650 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THIMO_RS14650 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14650 IPR025944 Sigma-54 interaction domain, conserved site THIMO_RS14650 IPR002078 RNA polymerase sigma factor 54 interaction domain THIMO_RS14650 IPR009057 Homeobox-like domain superfamily THIMO_RS14650 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THIMO_RS14650 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS14655 IPR023346 Lysozyme-like domain superfamily THIMO_RS14655 IPR000189 Prokaryotic transglycosylase, active site THIMO_RS14655 IPR008258 Transglycosylase SLT domain 1 THIMO_RS14685 IPR011990 Tetratricopeptide-like helical domain superfamily THIMO_RS14685 IPR019734 Tetratricopeptide repeat THIMO_RS14685 IPR013026 Tetratricopeptide repeat-containing domain THIMO_RS14710 IPR006219 DHAP synthase, class 1 THIMO_RS14710 IPR006218 DAHP synthetase I/KDSA THIMO_RS14710 IPR013785 Aldolase-type TIM barrel THIMO_RS14715 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS14715 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain THIMO_RS14715 IPR018982 RQC domain THIMO_RS14715 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14715 IPR011545 DEAD/DEAH box helicase domain THIMO_RS14715 IPR004589 DNA helicase, ATP-dependent, RecQ type THIMO_RS14715 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial THIMO_RS14715 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS14715 IPR010997 HRDC-like superfamily THIMO_RS14715 IPR001650 Helicase, C-terminal THIMO_RS14715 IPR002121 HRDC domain THIMO_RS14730 IPR011701 Major facilitator superfamily THIMO_RS14730 IPR036259 MFS transporter superfamily THIMO_RS14730 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 THIMO_RS14735 IPR007476 Putative exonuclease, RdgC THIMO_RS14745 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS14745 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase THIMO_RS14745 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal THIMO_RS14745 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal THIMO_RS14750 IPR020805 Cell division protein FtsZ, conserved site THIMO_RS14750 IPR003008 Tubulin/FtsZ, GTPase domain THIMO_RS14750 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain THIMO_RS14750 IPR008280 Tubulin/FtsZ, C-terminal THIMO_RS14750 IPR024757 Cell division protein FtsZ, C-terminal THIMO_RS14750 IPR000158 Cell division protein FtsZ THIMO_RS14750 IPR036525 Tubulin/FtsZ, GTPase domain superfamily THIMO_RS14755 IPR020823 Cell division protein FtsA THIMO_RS14755 IPR003494 SHS2 domain inserted in FtsA THIMO_RS14760 IPR026579 Cell division protein FtsQ THIMO_RS14760 IPR034746 POTRA domain THIMO_RS14760 IPR013685 POTRA domain, FtsQ-type THIMO_RS14760 IPR005548 Cell division protein FtsQ/DivIB THIMO_RS14765 IPR016185 Pre-ATP-grasp domain superfamily THIMO_RS14765 IPR011127 D-alanine--D-alanine ligase, N-terminal domain THIMO_RS14765 IPR011095 D-alanine--D-alanine ligase, C-terminal THIMO_RS14765 IPR005905 D-alanine--D-alanine ligase THIMO_RS14765 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site THIMO_RS14765 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS14765 IPR011761 ATP-grasp fold THIMO_RS14770 IPR016166 FAD-binding domain, PCMH-type THIMO_RS14770 IPR036318 FAD-binding, type PCMH-like superfamily THIMO_RS14770 IPR016167 FAD-binding, type PCMH, subdomain 1 THIMO_RS14770 IPR016169 FAD-binding, type PCMH, subdomain 2 THIMO_RS14770 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase THIMO_RS14770 IPR006094 FAD linked oxidase, N-terminal THIMO_RS14770 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal THIMO_RS14770 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily THIMO_RS14775 IPR000713 Mur ligase, N-terminal catalytic domain THIMO_RS14775 IPR036565 Mur-like, catalytic domain superfamily THIMO_RS14775 IPR004101 Mur ligase, C-terminal THIMO_RS14775 IPR005758 UDP-N-acetylmuramate--L-alanine ligase THIMO_RS14775 IPR036615 Mur ligase, C-terminal domain superfamily THIMO_RS14775 IPR013221 Mur ligase, central THIMO_RS14780 IPR007235 Glycosyl transferase, family 28, C-terminal THIMO_RS14780 IPR006009 N-acetylglucosaminyltransferase, MurG THIMO_RS14780 IPR004276 Glycosyltransferase family 28, N-terminal domain THIMO_RS14780 IPR006311 Twin-arginine translocation pathway, signal sequence THIMO_RS14785 IPR013437 Probable peptidoglycan glycosyltransferase FtsW THIMO_RS14785 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA THIMO_RS14790 IPR036615 Mur ligase, C-terminal domain superfamily THIMO_RS14790 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase THIMO_RS14790 IPR013221 Mur ligase, central THIMO_RS14790 IPR036565 Mur-like, catalytic domain superfamily THIMO_RS14790 IPR004101 Mur ligase, C-terminal THIMO_RS14795 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase THIMO_RS14795 IPR000715 Glycosyl transferase, family 4 THIMO_RS14795 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site THIMO_RS14800 IPR035911 MurE/MurF, N-terminal THIMO_RS14800 IPR036565 Mur-like, catalytic domain superfamily THIMO_RS14800 IPR004101 Mur ligase, C-terminal THIMO_RS14800 IPR036615 Mur ligase, C-terminal domain superfamily THIMO_RS14800 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase THIMO_RS14800 IPR000713 Mur ligase, N-terminal catalytic domain THIMO_RS14800 IPR013221 Mur ligase, central THIMO_RS14805 IPR004101 Mur ligase, C-terminal THIMO_RS14805 IPR036565 Mur-like, catalytic domain superfamily THIMO_RS14805 IPR013221 Mur ligase, central THIMO_RS14805 IPR000713 Mur ligase, N-terminal catalytic domain THIMO_RS14805 IPR035911 MurE/MurF, N-terminal THIMO_RS14805 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase THIMO_RS14805 IPR036615 Mur ligase, C-terminal domain superfamily THIMO_RS14810 IPR012338 Beta-lactamase/transpeptidase-like THIMO_RS14810 IPR037532 Peptidoglycan D,D-transpeptidase FtsI THIMO_RS14810 IPR005311 Penicillin-binding protein, dimerisation domain THIMO_RS14810 IPR036138 Penicillin-binding protein, dimerisation domain superfamily THIMO_RS14810 IPR001460 Penicillin-binding protein, transpeptidase THIMO_RS14815 IPR011922 Cell division protein FtsL THIMO_RS14820 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily THIMO_RS14820 IPR002903 Ribosomal RNA small subunit methyltransferase H THIMO_RS14820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS14825 IPR003444 Transcriptional regulator MraZ THIMO_RS14825 IPR035644 MraZ, C-terminal THIMO_RS14825 IPR037914 SpoVT-AbrB domain superfamily THIMO_RS14825 IPR007159 SpoVT-AbrB domain THIMO_RS14825 IPR035642 MraZ, N-terminal THIMO_RS14825 IPR038619 MraZ superfamily THIMO_RS14825 IPR020603 MraZ domain THIMO_RS14830 IPR003805 Adenosylcobinamide-GDP ribazoletransferase THIMO_RS14835 IPR029033 Histidine phosphatase superfamily THIMO_RS14835 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site THIMO_RS14835 IPR017578 Alpha-ribazole phosphatase, CobC THIMO_RS14835 IPR013078 Histidine phosphatase superfamily, clade-1 THIMO_RS14840 IPR029069 HotDog domain superfamily THIMO_RS14840 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ THIMO_RS14840 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ THIMO_RS14845 IPR003439 ABC transporter-like THIMO_RS14845 IPR003593 AAA+ ATPase domain THIMO_RS14845 IPR017871 ABC transporter, conserved site THIMO_RS14845 IPR015851 ABC transporter, NodI THIMO_RS14845 IPR005978 Nodulation ABC transporter, NodI THIMO_RS14845 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14855 IPR012730 Molybdopterin synthase sulfurylase MoeB THIMO_RS14855 IPR000594 THIF-type NAD/FAD binding fold THIMO_RS14855 IPR035985 Ubiquitin-activating enzyme THIMO_RS14865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS14865 IPR007848 Methyltransferase small domain THIMO_RS14865 IPR040758 Release factor glutamine methyltransferase, N-terminal domain THIMO_RS14865 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THIMO_RS14865 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific THIMO_RS14865 IPR004556 Methyltransferase HemK-like THIMO_RS14870 IPR004373 Peptide chain release factor 1 THIMO_RS14870 IPR000352 Peptide chain release factor class I THIMO_RS14870 IPR005139 Peptide chain release factor THIMO_RS14875 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase THIMO_RS14875 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain THIMO_RS14875 IPR018214 Glutamyl-tRNA reductase, conserved site THIMO_RS14875 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily THIMO_RS14875 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily THIMO_RS14875 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase THIMO_RS14875 IPR036291 NAD(P)-binding domain superfamily THIMO_RS14875 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal THIMO_RS14880 IPR019734 Tetratricopeptide repeat THIMO_RS14880 IPR011990 Tetratricopeptide-like helical domain superfamily THIMO_RS14880 IPR013026 Tetratricopeptide repeat-containing domain THIMO_RS14885 IPR036554 GHMP kinase, C-terminal domain superfamily THIMO_RS14885 IPR006204 GHMP kinase N-terminal domain THIMO_RS14885 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase THIMO_RS14885 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS14885 IPR013750 GHMP kinase, C-terminal domain THIMO_RS14885 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS14895 IPR029057 Phosphoribosyltransferase-like THIMO_RS14895 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain THIMO_RS14895 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site THIMO_RS14895 IPR005946 Ribose-phosphate pyrophosphokinase THIMO_RS14895 IPR000836 Phosphoribosyltransferase domain THIMO_RS14895 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type THIMO_RS14900 IPR037121 Ribosomal protein L25, C-terminal THIMO_RS14900 IPR029751 Ribosomal protein L25 THIMO_RS14900 IPR001021 Ribosomal protein L25, long-form THIMO_RS14900 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily THIMO_RS14900 IPR020055 Ribosomal protein L25, short-form THIMO_RS14900 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal THIMO_RS14900 IPR020057 Ribosomal protein L25, beta domain THIMO_RS14905 IPR018171 Peptidyl-tRNA hydrolase, conserved site THIMO_RS14905 IPR001328 Peptidyl-tRNA hydrolase THIMO_RS14905 IPR036416 Peptidyl-tRNA hydrolase superfamily THIMO_RS14910 IPR036291 NAD(P)-binding domain superfamily THIMO_RS14910 IPR005886 UDP-glucose 4-epimerase THIMO_RS14910 IPR016040 NAD(P)-binding domain THIMO_RS14920 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS14920 IPR000700 PAS-associated, C-terminal THIMO_RS14920 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS14920 IPR005467 Histidine kinase domain THIMO_RS14920 IPR000014 PAS domain THIMO_RS14920 IPR001610 PAC motif THIMO_RS14920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS14920 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS14920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS14920 IPR003660 HAMP domain THIMO_RS14920 IPR035965 PAS domain superfamily THIMO_RS14925 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS14925 IPR011006 CheY-like superfamily THIMO_RS14925 IPR039420 Transcriptional regulatory protein WalR-like THIMO_RS14925 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS14925 IPR016032 Signal transduction response regulator, C-terminal effector THIMO_RS14925 IPR001867 OmpR/PhoB-type DNA-binding domain THIMO_RS14930 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain THIMO_RS14930 IPR006143 RND efflux pump, membrane fusion protein THIMO_RS14935 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THIMO_RS14935 IPR001036 Acriflavin resistance protein THIMO_RS14935 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 THIMO_RS14940 IPR010131 RND efflux system, outer membrane lipoprotein, NodT THIMO_RS14940 IPR003423 Outer membrane efflux protein THIMO_RS14955 IPR009241 Toxin HigB-like THIMO_RS14965 IPR014016 UvrD-like helicase, ATP-binding domain THIMO_RS14965 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14965 IPR005752 ATP-dependent DNA helicase Rep THIMO_RS14965 IPR034739 UvrD/AddA helicase, N-terminal THIMO_RS14965 IPR000212 DNA helicase, UvrD/REP type THIMO_RS14965 IPR014017 UvrD-like DNA helicase, C-terminal THIMO_RS14965 IPR013986 DExx box DNA helicase domain superfamily THIMO_RS14985 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS14985 IPR031166 EngA-type guanine nucleotide-binding (G) domain THIMO_RS14985 IPR015946 K homology domain-like, alpha/beta THIMO_RS14985 IPR032859 GTPase Der, C-terminal KH-domain-like THIMO_RS14985 IPR005225 Small GTP-binding protein domain THIMO_RS14985 IPR016484 GTP-binding protein EngA THIMO_RS14985 IPR006073 GTP binding domain THIMO_RS14995 IPR004254 AdipoR/Haemolysin-III-related THIMO_RS14995 IPR005744 Hly-III THIMO_RS15000 IPR017871 ABC transporter, conserved site THIMO_RS15000 IPR003439 ABC transporter-like THIMO_RS15000 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS15000 IPR003593 AAA+ ATPase domain THIMO_RS15015 IPR013078 Histidine phosphatase superfamily, clade-1 THIMO_RS15015 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site THIMO_RS15015 IPR005952 Phosphoglycerate mutase 1 THIMO_RS15015 IPR029033 Histidine phosphatase superfamily THIMO_RS15020 IPR029787 Nucleotide cyclase THIMO_RS15020 IPR009050 Globin-like superfamily THIMO_RS15020 IPR000160 GGDEF domain THIMO_RS15020 IPR012292 Globin/Protoglobin THIMO_RS15020 IPR039435 Diguanylate cyclase DosC, globin sensor domain THIMO_RS15030 IPR036380 Isochorismatase-like superfamily THIMO_RS15030 IPR000868 Isochorismatase-like THIMO_RS15035 IPR031982 Type IV minor pilin ComP THIMO_RS15035 IPR012902 Prokaryotic N-terminal methylation site THIMO_RS15040 IPR008707 PilC beta-propeller domain THIMO_RS15040 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily THIMO_RS15070 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS15070 IPR001650 Helicase, C-terminal THIMO_RS15070 IPR003593 AAA+ ATPase domain THIMO_RS15070 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS15070 IPR010222 RNA helicase HrpA THIMO_RS15070 IPR011709 Domain of unknown function DUF1605 THIMO_RS15070 IPR011545 DEAD/DEAH box helicase domain THIMO_RS15070 IPR024590 RNA helicase HrpA, C-terminal THIMO_RS15070 IPR007502 Helicase-associated domain THIMO_RS15075 IPR002890 Macroglobulin domain THIMO_RS15075 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid THIMO_RS15075 IPR021868 Alpha-2-macroglobulin MG3 domain THIMO_RS15075 IPR001599 Alpha-2-macroglobulin THIMO_RS15075 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain THIMO_RS15075 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain THIMO_RS15075 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain THIMO_RS15075 IPR040639 Alpha-2-macroglobulin, MG1 domain THIMO_RS15075 IPR011625 Alpha-2-macroglobulin, bait region domain THIMO_RS15075 IPR026284 Alpha-2-macroglobulin, bacteria THIMO_RS15080 IPR012338 Beta-lactamase/transpeptidase-like THIMO_RS15080 IPR001264 Glycosyl transferase, family 51 THIMO_RS15080 IPR023346 Lysozyme-like domain superfamily THIMO_RS15080 IPR009647 Penicillin-binding, C-terminal THIMO_RS15080 IPR036950 Penicillin binding protein transglycosylase domain THIMO_RS15080 IPR001460 Penicillin-binding protein, transpeptidase THIMO_RS15080 IPR011815 Penicillin-binding protein 1C THIMO_RS15110 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS15110 IPR008995 Molybdate/tungstate binding, C-terminal THIMO_RS15110 IPR030287 Fe(3+) ions import ATP-binding protein FbpC THIMO_RS15110 IPR003439 ABC transporter-like THIMO_RS15110 IPR013611 Transport-associated OB, type 2 THIMO_RS15110 IPR003593 AAA+ ATPase domain THIMO_RS15110 IPR017871 ABC transporter, conserved site THIMO_RS15110 IPR015853 ABC transporter, ferric cation import, FbpC THIMO_RS15115 IPR035906 MetI-like superfamily THIMO_RS15115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS15115 IPR011867 Molybdate ABC transporter, permease protein THIMO_RS15135 IPR003538 Gram-negative bacterial TonB protein THIMO_RS15135 IPR037682 TonB, C-terminal THIMO_RS15135 IPR006260 TonB/TolA, C-terminal THIMO_RS15140 IPR003400 Biopolymer transport protein ExbD/TolR THIMO_RS15140 IPR014170 TonB system transport protein ExbD type-1 THIMO_RS15145 IPR002898 MotA/TolQ/ExbB proton channel THIMO_RS15155 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily THIMO_RS15155 IPR010916 TonB box, conserved site THIMO_RS15155 IPR000531 TonB-dependent receptor-like, beta-barrel THIMO_RS15155 IPR012910 TonB-dependent receptor, plug domain THIMO_RS15155 IPR010101 TonB-dependent vitamin B12 transporter BtuB THIMO_RS15155 IPR039426 Vitamin B12 transporter BtuB-like THIMO_RS15155 IPR037066 TonB-dependent receptor, plug domain superfamily THIMO_RS15160 IPR041720 Aldolase FbaB-like, archaeal-type THIMO_RS15160 IPR002915 DeoC/FbaB/ lacD aldolase THIMO_RS15160 IPR013785 Aldolase-type TIM barrel THIMO_RS15170 IPR035439 UPF0145 domain superfamily THIMO_RS15170 IPR002765 Uncharacterised protein family UPF0145 THIMO_RS15185 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS15185 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS15185 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS15185 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS15185 IPR005467 Histidine kinase domain THIMO_RS15185 IPR003660 HAMP domain THIMO_RS15185 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS15190 IPR001867 OmpR/PhoB-type DNA-binding domain THIMO_RS15190 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS15190 IPR011006 CheY-like superfamily THIMO_RS15190 IPR039420 Transcriptional regulatory protein WalR-like THIMO_RS15190 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS15205 IPR011105 Cell wall hydrolase, SleB THIMO_RS15205 IPR014224 Spore cortex-lytic enzyme SleB THIMO_RS15205 IPR036365 PGBD-like superfamily THIMO_RS15205 IPR036366 PGBD superfamily THIMO_RS15205 IPR042047 Cell wall hydrolase SleB, domain 1 THIMO_RS15205 IPR002477 Peptidoglycan binding-like THIMO_RS15220 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THIMO_RS15220 IPR003918 NADH:ubiquinone oxidoreductase THIMO_RS15225 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H THIMO_RS15225 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site THIMO_RS15230 IPR038730 Hydrogenase-4 component E-like THIMO_RS15235 IPR003918 NADH:ubiquinone oxidoreductase THIMO_RS15235 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THIMO_RS15240 IPR029014 [NiFe]-hydrogenase, large subunit THIMO_RS15240 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H THIMO_RS15240 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site THIMO_RS15240 IPR001135 NADH-quinone oxidoreductase, subunit D THIMO_RS15240 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily THIMO_RS15245 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit THIMO_RS15245 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit THIMO_RS15320 IPR022907 VapC family THIMO_RS15320 IPR002716 PIN domain THIMO_RS15320 IPR029060 PIN-like domain superfamily THIMO_RS15330 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS15330 IPR014001 Helicase superfamily 1/2, ATP-binding domain THIMO_RS15330 IPR000330 SNF2-related, N-terminal domain THIMO_RS15330 IPR007527 Zinc finger, SWIM-type THIMO_RS15330 IPR001650 Helicase, C-terminal THIMO_RS15330 IPR038718 SNF2-like, N-terminal domain superfamily THIMO_RS15345 IPR003593 AAA+ ATPase domain THIMO_RS15345 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS15345 IPR010285 DNA helicase Pif1-like THIMO_RS15350 IPR002347 Short-chain dehydrogenase/reductase SDR THIMO_RS15350 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase THIMO_RS15350 IPR036291 NAD(P)-binding domain superfamily THIMO_RS15350 IPR020904 Short-chain dehydrogenase/reductase, conserved site THIMO_RS15355 IPR012337 Ribonuclease H-like superfamily THIMO_RS15355 IPR001584 Integrase, catalytic core THIMO_RS15355 IPR025948 HTH-like domain THIMO_RS15355 IPR036397 Ribonuclease H superfamily THIMO_RS15360 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site THIMO_RS15360 IPR014282 Nitrogen fixation protein NifM THIMO_RS15360 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type THIMO_RS15360 IPR027304 Trigger factor/SurA domain superfamily THIMO_RS15365 IPR007415 Nitrogenase MoFe maturation protein, NifZ THIMO_RS15370 IPR004893 Nitrogen fixation protein NifW THIMO_RS15375 IPR011990 Tetratricopeptide-like helical domain superfamily THIMO_RS15380 IPR013785 Aldolase-type TIM barrel THIMO_RS15380 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site THIMO_RS15380 IPR000891 Pyruvate carboxyltransferase THIMO_RS15380 IPR013477 Homocitrate synthase NifV-like THIMO_RS15385 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit THIMO_RS15385 IPR027394 Cytochrome-c3 hydrogenase, C-terminal THIMO_RS15385 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily THIMO_RS15385 IPR001821 [NiFe]-hydrogenase, small subunit THIMO_RS15385 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THIMO_RS15385 IPR006311 Twin-arginine translocation pathway, signal sequence THIMO_RS15385 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily THIMO_RS15390 IPR001501 Nickel-dependent hydrogenase, large subunit THIMO_RS15390 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site THIMO_RS15390 IPR029014 [NiFe]-hydrogenase, large subunit THIMO_RS15395 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase THIMO_RS15395 IPR016174 Di-haem cytochrome, transmembrane THIMO_RS15395 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit THIMO_RS15400 IPR004419 Peptidase A31, hydrogenase expression/formation protein THIMO_RS15400 IPR023430 Peptidase HybD-like domain superfamily THIMO_RS15400 IPR000671 Peptidase A31 family THIMO_RS15410 IPR038127 NafY, N-terminal domain superfamily THIMO_RS15410 IPR034169 NifX-like domain THIMO_RS15410 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THIMO_RS15410 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis THIMO_RS15410 IPR031763 Dinitrogenase iron-molybdenum cofactor, N-terminal THIMO_RS15415 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS15415 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS15420 IPR024044 NifT/FixU barrel-like domain superfamily THIMO_RS15420 IPR009727 NifT/FixU THIMO_RS15425 IPR005976 Nitrogenase molybdenum-iron protein beta chain THIMO_RS15425 IPR000318 Nitrogenase component 1, conserved site THIMO_RS15425 IPR000510 Nitrogenase/oxidoreductase, component 1 THIMO_RS15425 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal THIMO_RS15430 IPR000318 Nitrogenase component 1, conserved site THIMO_RS15430 IPR010143 Nitrogenase component 1, alpha chain THIMO_RS15430 IPR000510 Nitrogenase/oxidoreductase, component 1 THIMO_RS15430 IPR005972 Nitrogenase molybdenum-iron protein alpha chain THIMO_RS15435 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS15435 IPR005977 Nitrogenase iron protein NifH THIMO_RS15435 IPR030655 NifH/chlL conserved site THIMO_RS15435 IPR000392 NifH/frxC family THIMO_RS15440 IPR009953 Dinitrogenase reductase ADP-ribosyltransferase THIMO_RS15455 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis THIMO_RS15455 IPR013785 Aldolase-type TIM barrel THIMO_RS15455 IPR006638 Elp3/MiaB/NifB THIMO_RS15455 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THIMO_RS15455 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site THIMO_RS15455 IPR005980 Nitrogenase cofactor biosynthesis protein NifB THIMO_RS15455 IPR007197 Radical SAM THIMO_RS15455 IPR034165 FeMo cofactor biosynthesis protein NifB, C-terminal THIMO_RS15460 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS15460 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS15465 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THIMO_RS15465 IPR001279 Metallo-beta-lactamase THIMO_RS15465 IPR029039 Flavoprotein-like superfamily THIMO_RS15465 IPR001226 Flavodoxin, conserved site THIMO_RS15465 IPR016440 Rubredoxin-oxygen oxidoreductase THIMO_RS15465 IPR008254 Flavodoxin/nitric oxide synthase THIMO_RS15470 IPR012675 Beta-grasp domain superfamily THIMO_RS15470 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site THIMO_RS15470 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THIMO_RS15470 IPR036010 2Fe-2S ferredoxin-like superfamily THIMO_RS15475 IPR012675 Beta-grasp domain superfamily THIMO_RS15475 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site THIMO_RS15475 IPR036010 2Fe-2S ferredoxin-like superfamily THIMO_RS15475 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain THIMO_RS15480 IPR006975 NifQ THIMO_RS15485 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase THIMO_RS15485 IPR005502 ADP-ribosylation/Crystallin J1 THIMO_RS15485 IPR036705 ADP-ribosylation/Crystallin J1 superfamily THIMO_RS15490 IPR001610 PAC motif THIMO_RS15490 IPR000014 PAS domain THIMO_RS15490 IPR013655 PAS fold-3 THIMO_RS15490 IPR013656 PAS fold-4 THIMO_RS15490 IPR029787 Nucleotide cyclase THIMO_RS15490 IPR007895 MASE1 THIMO_RS15490 IPR035965 PAS domain superfamily THIMO_RS15490 IPR001633 EAL domain THIMO_RS15490 IPR035919 EAL domain superfamily THIMO_RS15490 IPR000160 GGDEF domain THIMO_RS15490 IPR000700 PAS-associated, C-terminal THIMO_RS15510 IPR037062 Malic enzyme, N-terminal domain superfamily THIMO_RS15510 IPR012301 Malic enzyme, N-terminal domain THIMO_RS15510 IPR012302 Malic enzyme, NAD-binding THIMO_RS15510 IPR012188 NAD(P)-dependent malic enzyme THIMO_RS15510 IPR036291 NAD(P)-binding domain superfamily THIMO_RS15510 IPR015884 Malic enzyme, conserved site THIMO_RS15510 IPR042113 Phosphate acetyltransferase, domain 1 THIMO_RS15510 IPR042112 Phosphate acetyltransferase, domain 2 THIMO_RS15510 IPR002505 Phosphate acetyl/butaryl transferase THIMO_RS15515 IPR010233 Ubiquinone biosynthesis O-methyltransferase THIMO_RS15515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS15520 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) THIMO_RS15520 IPR029052 Metallo-dependent phosphatase-like THIMO_RS15520 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type THIMO_RS15525 IPR023065 Uncharacterised protein family ApaG THIMO_RS15525 IPR036767 ApaG domain superfamily THIMO_RS15525 IPR007474 ApaG domain THIMO_RS15540 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type THIMO_RS15540 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site THIMO_RS15540 IPR023034 Peptidyl-prolyl isomerase SurA THIMO_RS15540 IPR015391 SurA N-terminal THIMO_RS15540 IPR027304 Trigger factor/SurA domain superfamily THIMO_RS15545 IPR005653 Organic solvent tolerance-like, N-terminal THIMO_RS15545 IPR007543 LptD, C-terminal THIMO_RS15545 IPR020889 LPS-assembly protein LptD THIMO_RS15550 IPR011854 Carbamoyl dehydratase HypE THIMO_RS15550 IPR010918 PurM-like, C-terminal domain THIMO_RS15550 IPR036676 PurM-like, C-terminal domain superfamily THIMO_RS15550 IPR016188 PurM-like, N-terminal domain THIMO_RS15550 IPR036921 PurM-like, N-terminal domain superfamily THIMO_RS15555 IPR042243 HypD, domain 2 THIMO_RS15555 IPR042244 HypD, domain 1 THIMO_RS15555 IPR002780 Hydrogenase formation HypD protein THIMO_RS15560 IPR037254 HupF/HypC superfamily THIMO_RS15560 IPR019812 Hydrogenase assembly chaperone, conserved site THIMO_RS15560 IPR001109 Hydrogenase expression/formation protein, HupF/HypC THIMO_RS15565 IPR001501 Nickel-dependent hydrogenase, large subunit THIMO_RS15565 IPR029014 [NiFe]-hydrogenase, large subunit THIMO_RS15570 IPR007848 Methyltransferase small domain THIMO_RS15570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS15580 IPR018510 Diaminopimelate epimerase, active site THIMO_RS15580 IPR001653 Diaminopimelate epimerase, DapF THIMO_RS15585 IPR029016 GAF-like domain superfamily THIMO_RS15585 IPR007435 Protein of unknown function DUF484 THIMO_RS15590 IPR004107 Integrase, SAM-like, N-terminal THIMO_RS15590 IPR011010 DNA breaking-rejoining enzyme, catalytic core THIMO_RS15590 IPR013762 Integrase-like, catalytic domain superfamily THIMO_RS15590 IPR002104 Integrase, catalytic domain THIMO_RS15590 IPR010998 Integrase/recombinase, N-terminal THIMO_RS15590 IPR011931 Tyrosine recombinase XerC THIMO_RS15590 IPR023009 Tyrosine recombinase XerC/XerD THIMO_RS15600 IPR001353 Proteasome, subunit alpha/beta THIMO_RS15600 IPR023333 Proteasome B-type subunit THIMO_RS15600 IPR022281 ATP-dependent protease, HslV subunit THIMO_RS15600 IPR029055 Nucleophile aminohydrolases, N-terminal THIMO_RS15605 IPR004491 Heat shock protein HslU THIMO_RS15605 IPR019489 Clp ATPase, C-terminal THIMO_RS15605 IPR003959 ATPase, AAA-type, core THIMO_RS15605 IPR003593 AAA+ ATPase domain THIMO_RS15605 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS15610 IPR026669 Arsenite methyltransferase-like THIMO_RS15610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS15610 IPR025714 Methyltransferase domain THIMO_RS15625 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS15625 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS15625 IPR005814 Aminotransferase class-III THIMO_RS15625 IPR004636 Acetylornithine/Succinylornithine transaminase family THIMO_RS15625 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS15630 IPR024904 Ornithine carbamoyltransferase THIMO_RS15630 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding THIMO_RS15630 IPR006130 Aspartate/ornithine carbamoyltransferase THIMO_RS15630 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily THIMO_RS15630 IPR002292 Ornithine/putrescine carbamoyltransferase THIMO_RS15630 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain THIMO_RS15650 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG THIMO_RS15650 IPR036259 MFS transporter superfamily THIMO_RS15650 IPR020846 Major facilitator superfamily domain THIMO_RS15650 IPR011701 Major facilitator superfamily THIMO_RS15655 IPR036291 NAD(P)-binding domain superfamily THIMO_RS15655 IPR016040 NAD(P)-binding domain THIMO_RS15655 IPR021295 Protein of unknown function DUF2867 THIMO_RS15670 IPR002347 Short-chain dehydrogenase/reductase SDR THIMO_RS15670 IPR036291 NAD(P)-binding domain superfamily THIMO_RS15685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS15685 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS15685 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS15685 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS15685 IPR005467 Histidine kinase domain THIMO_RS15685 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS15685 IPR003660 HAMP domain THIMO_RS15690 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS15690 IPR005467 Histidine kinase domain THIMO_RS15690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS15690 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR THIMO_RS15690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS15690 IPR021766 Phosphate regulon sensor protein PhoR THIMO_RS15690 IPR013767 PAS fold THIMO_RS15690 IPR035965 PAS domain superfamily THIMO_RS15690 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS15690 IPR000014 PAS domain THIMO_RS15690 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS15695 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS15695 IPR039420 Transcriptional regulatory protein WalR-like THIMO_RS15695 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS15695 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB THIMO_RS15695 IPR001867 OmpR/PhoB-type DNA-binding domain THIMO_RS15695 IPR011006 CheY-like superfamily THIMO_RS15700 IPR013471 Ribonuclease Z/BN THIMO_RS15700 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THIMO_RS15700 IPR001279 Metallo-beta-lactamase THIMO_RS15705 IPR020084 NUDIX hydrolase, conserved site THIMO_RS15705 IPR015797 NUDIX hydrolase-like domain superfamily THIMO_RS15705 IPR000086 NUDIX hydrolase domain THIMO_RS15705 IPR020476 NUDIX hydrolase THIMO_RS15710 IPR003808 Fe-S metabolism associated domain, SufE-like THIMO_RS15710 IPR023939 Cysteine desulfuration protein SufE THIMO_RS15715 IPR000361 FeS cluster biogenesis THIMO_RS15715 IPR016092 FeS cluster insertion protein THIMO_RS15715 IPR017870 FeS cluster insertion, C-terminal, conserved site THIMO_RS15715 IPR035903 HesB-like domain superfamily THIMO_RS15715 IPR011302 Iron-binding protein IscA, proteobacteria THIMO_RS15720 IPR023353 LemA-like domain superfamily THIMO_RS15720 IPR007156 LemA THIMO_RS15730 IPR001610 PAC motif THIMO_RS15730 IPR000014 PAS domain THIMO_RS15730 IPR000700 PAS-associated, C-terminal THIMO_RS15730 IPR035965 PAS domain superfamily THIMO_RS15730 IPR035919 EAL domain superfamily THIMO_RS15730 IPR013656 PAS fold-4 THIMO_RS15730 IPR013655 PAS fold-3 THIMO_RS15730 IPR000160 GGDEF domain THIMO_RS15730 IPR029787 Nucleotide cyclase THIMO_RS15730 IPR001633 EAL domain THIMO_RS15760 IPR029058 Alpha/Beta hydrolase fold THIMO_RS15760 IPR000073 Alpha/beta hydrolase fold-1 THIMO_RS15760 IPR019913 Pyrimidine utilisation protein RutD THIMO_RS15770 IPR015890 Chorismate-utilising enzyme, C-terminal THIMO_RS15770 IPR005801 ADC synthase THIMO_RS15770 IPR004561 Isochorismate synthase THIMO_RS15775 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase THIMO_RS15775 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding THIMO_RS15775 IPR029061 Thiamin diphosphate-binding fold THIMO_RS15775 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain THIMO_RS15775 IPR029035 DHS-like NAD/FAD-binding domain superfamily THIMO_RS15780 IPR029045 ClpP/crotonase-like domain superfamily THIMO_RS15780 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site THIMO_RS15780 IPR001753 Enoyl-CoA hydratase/isomerase THIMO_RS15780 IPR014748 Enoyl-CoA hydratase, C-terminal THIMO_RS15780 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB THIMO_RS15785 IPR026046 UbiA prenyltransferase domain containing protein 1 THIMO_RS15785 IPR000537 UbiA prenyltransferase family THIMO_RS15785 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase THIMO_RS15790 IPR034603 Dipeptide epimerase THIMO_RS15790 IPR036849 Enolase-like, C-terminal domain superfamily THIMO_RS15790 IPR029017 Enolase-like, N-terminal THIMO_RS15790 IPR029065 Enolase C-terminal domain-like THIMO_RS15790 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site THIMO_RS15790 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal THIMO_RS15790 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain THIMO_RS15800 IPR017853 Glycoside hydrolase superfamily THIMO_RS15800 IPR003385 Glycoside hydrolase, family 77 THIMO_RS15805 IPR011004 Trimeric LpxA-like superfamily THIMO_RS15805 IPR011831 Glucose-1-phosphate adenylyltransferase THIMO_RS15805 IPR005836 ADP-glucose pyrophosphorylase, conserved site THIMO_RS15805 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial THIMO_RS15805 IPR005835 Nucleotidyl transferase domain THIMO_RS15805 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS15810 IPR014756 Immunoglobulin E-set THIMO_RS15810 IPR013783 Immunoglobulin-like fold THIMO_RS15810 IPR037439 1,4-alpha-glucan-branching enzyme THIMO_RS15810 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB THIMO_RS15810 IPR006047 Glycosyl hydrolase, family 13, catalytic domain THIMO_RS15810 IPR004193 Glycoside hydrolase, family 13, N-terminal THIMO_RS15810 IPR013780 Glycosyl hydrolase, all-beta THIMO_RS15810 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta THIMO_RS15810 IPR017853 Glycoside hydrolase superfamily THIMO_RS15815 IPR011129 Cold shock domain THIMO_RS15815 IPR012156 Cold shock, CspA THIMO_RS15815 IPR019844 Cold-shock (CSD) domain THIMO_RS15815 IPR002059 Cold-shock protein, DNA-binding THIMO_RS15815 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS15820 IPR001972 Stomatin family THIMO_RS15820 IPR032435 Band 7, C-terminal extension THIMO_RS15820 IPR018080 Band 7/stomatin-like, conserved site THIMO_RS15820 IPR036013 Band 7/SPFH domain superfamily THIMO_RS15820 IPR001107 Band 7 domain THIMO_RS15830 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily THIMO_RS15830 IPR003448 Molybdopterin biosynthesis MoaE THIMO_RS15835 IPR005802 Aminodeoxychorismate synthase, component I THIMO_RS15835 IPR005801 ADC synthase THIMO_RS15835 IPR019999 Anthranilate synthase component I-like THIMO_RS15835 IPR015890 Chorismate-utilising enzyme, C-terminal THIMO_RS15835 IPR006805 Anthranilate synthase component I, N-terminal THIMO_RS15840 IPR040442 Pyruvate kinase-like domain superfamily THIMO_RS15840 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THIMO_RS15840 IPR010121 Pyruvate, phosphate dikinase THIMO_RS15840 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding THIMO_RS15840 IPR036637 Phosphohistidine domain superfamily THIMO_RS15840 IPR000121 PEP-utilising enzyme, C-terminal THIMO_RS15840 IPR018274 PEP-utilising enzyme, active site THIMO_RS15840 IPR008279 PEP-utilising enzyme, mobile domain THIMO_RS15840 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS15840 IPR023151 PEP-utilising enzyme, conserved site THIMO_RS15845 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain THIMO_RS15845 IPR002303 Valine-tRNA ligase THIMO_RS15845 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily THIMO_RS15845 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding THIMO_RS15845 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm THIMO_RS15845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS15845 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding THIMO_RS15845 IPR033705 Valyl tRNA synthetase, anticodon-binding domain THIMO_RS15845 IPR002300 Aminoacyl-tRNA synthetase, class Ia THIMO_RS15845 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site THIMO_RS15845 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm THIMO_RS15850 IPR000595 Cyclic nucleotide-binding domain THIMO_RS15850 IPR012318 Crp-type HTH domain THIMO_RS15850 IPR014710 RmlC-like jelly roll fold THIMO_RS15850 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS15850 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS15850 IPR018490 Cyclic nucleotide-binding-like THIMO_RS15860 IPR007428 MlaA lipoprotein THIMO_RS15865 IPR013520 Exonuclease, RNase T/DNA polymerase III THIMO_RS15865 IPR036397 Ribonuclease H superfamily THIMO_RS15865 IPR012337 Ribonuclease H-like superfamily THIMO_RS15865 IPR005987 Ribonuclease T THIMO_RS15870 IPR014434 Monothiol glutaredoxin THIMO_RS15870 IPR004480 Monothiol glutaredoxin-related THIMO_RS15870 IPR036249 Thioredoxin-like superfamily THIMO_RS15870 IPR033658 Glutaredoxin, PICOT-like THIMO_RS15870 IPR002109 Glutaredoxin THIMO_RS15875 IPR033738 Asparagine synthase, N-terminal domain THIMO_RS15875 IPR017932 Glutamine amidotransferase type 2 domain THIMO_RS15875 IPR029055 Nucleophile aminohydrolases, N-terminal THIMO_RS15875 IPR006426 Asparagine synthase, glutamine-hydrolyzing THIMO_RS15875 IPR001962 Asparagine synthase THIMO_RS15890 IPR019831 Manganese/iron superoxide dismutase, N-terminal THIMO_RS15890 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily THIMO_RS15890 IPR001189 Manganese/iron superoxide dismutase THIMO_RS15890 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily THIMO_RS15890 IPR019832 Manganese/iron superoxide dismutase, C-terminal THIMO_RS15890 IPR019833 Manganese/iron superoxide dismutase, binding site THIMO_RS15900 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal THIMO_RS15900 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site THIMO_RS15900 IPR033966 RuBisCO THIMO_RS15900 IPR020871 Ribulose bisphosphate carboxylase large subunit, type II THIMO_RS15900 IPR036422 RuBisCO large subunit, N-terminal domain superfamily THIMO_RS15900 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal THIMO_RS15900 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily THIMO_RS15905 IPR001501 Nickel-dependent hydrogenase, large subunit THIMO_RS15905 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site THIMO_RS15905 IPR029014 [NiFe]-hydrogenase, large subunit THIMO_RS15915 IPR036197 NarG-like superfamily THIMO_RS15920 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal THIMO_RS15920 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily THIMO_RS15920 IPR006311 Twin-arginine translocation pathway, signal sequence THIMO_RS15920 IPR001821 [NiFe]-hydrogenase, small subunit THIMO_RS15920 IPR027394 Cytochrome-c3 hydrogenase, C-terminal THIMO_RS15920 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily THIMO_RS15920 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit THIMO_RS15960 IPR029039 Flavoprotein-like superfamily THIMO_RS15960 IPR003680 Flavodoxin-like fold THIMO_RS15975 IPR001135 NADH-quinone oxidoreductase, subunit D THIMO_RS15975 IPR029014 [NiFe]-hydrogenase, large subunit THIMO_RS15975 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H THIMO_RS15975 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily THIMO_RS15985 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit THIMO_RS15985 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit THIMO_RS15995 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal THIMO_RS15995 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit THIMO_RS15995 IPR005663 Monovalent cation proton antiporter subunit A THIMO_RS15995 IPR005281 Monovalent cation:proton antiporter, subunit B THIMO_RS15995 IPR025383 Domain of unknown function DUF4040 THIMO_RS15995 IPR007182 Na+/H+ antiporter MnhB subunit-related protein THIMO_RS16000 IPR005122 Uracil-DNA glycosylase-like THIMO_RS16000 IPR005273 Uracil-DNA glycosylase family 4 THIMO_RS16000 IPR036895 Uracil-DNA glycosylase-like domain superfamily THIMO_RS16005 IPR000891 Pyruvate carboxyltransferase THIMO_RS16005 IPR005671 2-isopropylmalate synthase, bacterial-type THIMO_RS16005 IPR013785 Aldolase-type TIM barrel THIMO_RS16005 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site THIMO_RS16005 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain THIMO_RS16005 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily THIMO_RS16010 IPR020890 Transcription regulator HTH, HdfR THIMO_RS16010 IPR005119 LysR, substrate-binding THIMO_RS16010 IPR000847 Transcription regulator HTH, LysR THIMO_RS16010 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS16010 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS16015 IPR042072 DsrC-like protein, C-terminal domain THIMO_RS16015 IPR007453 Sulphur transfer protein DsrC/TusE THIMO_RS16015 IPR025526 DsrC-like domain superfamily THIMO_RS16020 IPR005990 Inosine-5'-monophosphate dehydrogenase THIMO_RS16020 IPR015875 IMP dehydrogenase / GMP reductase, conserved site THIMO_RS16020 IPR001093 IMP dehydrogenase/GMP reductase THIMO_RS16020 IPR013785 Aldolase-type TIM barrel THIMO_RS16020 IPR000644 CBS domain THIMO_RS16030 IPR011254 Prismane-like superfamily THIMO_RS16030 IPR016099 Prismane-like, alpha/beta-sandwich THIMO_RS16030 IPR016100 Prismane, alpha-bundle THIMO_RS16030 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase THIMO_RS16030 IPR010048 Hydroxylamine reductase THIMO_RS16035 IPR014710 RmlC-like jelly roll fold THIMO_RS16035 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THIMO_RS16035 IPR018490 Cyclic nucleotide-binding-like THIMO_RS16035 IPR000595 Cyclic nucleotide-binding domain THIMO_RS16035 IPR001423 Lysophospholipase patatin, conserved site THIMO_RS16035 IPR002641 Patatin-like phospholipase domain THIMO_RS16055 IPR005836 ADP-glucose pyrophosphorylase, conserved site THIMO_RS16055 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial THIMO_RS16055 IPR005835 Nucleotidyl transferase domain THIMO_RS16055 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS16055 IPR011004 Trimeric LpxA-like superfamily THIMO_RS16060 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent THIMO_RS16060 IPR017850 Alkaline-phosphatase-like, core domain superfamily THIMO_RS16060 IPR011258 BPG-independent PGAM, N-terminal THIMO_RS16060 IPR006124 Metalloenzyme THIMO_RS16060 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily THIMO_RS16065 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain THIMO_RS16065 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily THIMO_RS16065 IPR000398 Thymidylate synthase THIMO_RS16070 IPR002898 MotA/TolQ/ExbB proton channel THIMO_RS16075 IPR003400 Biopolymer transport protein ExbD/TolR THIMO_RS16080 IPR036640 ABC transporter type 1, transmembrane domain superfamily THIMO_RS16080 IPR011527 ABC transporter type 1, transmembrane domain THIMO_RS16080 IPR003439 ABC transporter-like THIMO_RS16080 IPR017871 ABC transporter, conserved site THIMO_RS16080 IPR003593 AAA+ ATPase domain THIMO_RS16080 IPR039421 Type I protein exporter THIMO_RS16080 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS16080 IPR011917 ABC transporter, lipid A export, MsbA THIMO_RS16085 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS16085 IPR003758 Tetraacyldisaccharide 4'-kinase THIMO_RS16090 IPR005651 Trm112-like THIMO_RS16095 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase THIMO_RS16095 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS16095 IPR003329 Acylneuraminate cytidylyltransferase THIMO_RS16105 IPR006153 Cation/H+ exchanger THIMO_RS16105 IPR018422 Cation/H+ exchanger, CPA1 family THIMO_RS16105 IPR038770 Sodium/solute symporter superfamily THIMO_RS16135 IPR009061 Putative DNA-binding domain superfamily THIMO_RS16135 IPR011794 Hg(II)-responsive transcriptional regulator THIMO_RS16135 IPR000551 MerR-type HTH domain THIMO_RS16140 IPR006122 Heavy metal-associated domain, copper ion-binding THIMO_RS16140 IPR023298 P-type ATPase, transmembrane domain superfamily THIMO_RS16140 IPR018303 P-type ATPase, phosphorylation site THIMO_RS16140 IPR023299 P-type ATPase, cytoplasmic domain N THIMO_RS16140 IPR001757 P-type ATPase THIMO_RS16140 IPR023214 HAD superfamily THIMO_RS16140 IPR017969 Heavy-metal-associated, conserved site THIMO_RS16140 IPR027256 P-type ATPase, subfamily IB THIMO_RS16140 IPR036163 Heavy metal-associated domain superfamily THIMO_RS16140 IPR008250 P-type ATPase, A domain superfamily THIMO_RS16140 IPR036412 HAD-like superfamily THIMO_RS16140 IPR006121 Heavy metal-associated domain, HMA THIMO_RS16145 IPR023214 HAD superfamily THIMO_RS16145 IPR001757 P-type ATPase THIMO_RS16145 IPR023299 P-type ATPase, cytoplasmic domain N THIMO_RS16145 IPR036412 HAD-like superfamily THIMO_RS16145 IPR018303 P-type ATPase, phosphorylation site THIMO_RS16145 IPR027256 P-type ATPase, subfamily IB THIMO_RS16145 IPR008250 P-type ATPase, A domain superfamily THIMO_RS16145 IPR006121 Heavy metal-associated domain, HMA THIMO_RS16145 IPR017969 Heavy-metal-associated, conserved site THIMO_RS16145 IPR036163 Heavy metal-associated domain superfamily THIMO_RS16145 IPR023298 P-type ATPase, transmembrane domain superfamily THIMO_RS16155 IPR001204 Phosphate transporter THIMO_RS16160 IPR003607 HD/PDEase domain THIMO_RS16160 IPR006674 HD domain THIMO_RS16160 IPR002646 Poly A polymerase, head domain THIMO_RS16160 IPR012006 tRNA nucleotidyltransferase, proteobacteria THIMO_RS16160 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain THIMO_RS16185 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS16185 IPR000160 GGDEF domain THIMO_RS16185 IPR011006 CheY-like superfamily THIMO_RS16185 IPR029787 Nucleotide cyclase THIMO_RS16195 IPR004839 Aminotransferase, class I/classII THIMO_RS16195 IPR005860 L-threonine-O-3-phosphate decarboxylase THIMO_RS16195 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site THIMO_RS16195 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS16195 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS16195 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS16200 IPR004459 Cobyric acid synthase CobQ THIMO_RS16200 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 THIMO_RS16200 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS16200 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain THIMO_RS16200 IPR017929 CobB/CobQ glutamine amidotransferase THIMO_RS16200 IPR029062 Class I glutamine amidotransferase-like THIMO_RS16200 IPR011698 CobB/CobQ-like glutamine amidotransferase THIMO_RS16205 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal THIMO_RS16205 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily THIMO_RS16205 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like THIMO_RS16205 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic THIMO_RS16220 IPR019239 Bacterial antitoxin of type II TA system, VapB THIMO_RS16265 IPR001915 Peptidase M48 THIMO_RS16265 IPR022919 Peptidase M48, protease HtpX, putative THIMO_RS16270 IPR036909 Cytochrome c-like domain superfamily THIMO_RS16275 IPR012132 Glucose-methanol-choline oxidoreductase THIMO_RS16275 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal THIMO_RS16275 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal THIMO_RS16275 IPR027424 Glucose Oxidase, domain 2 THIMO_RS16275 IPR036188 FAD/NAD(P)-binding domain superfamily THIMO_RS16285 IPR002641 Patatin-like phospholipase domain THIMO_RS16285 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THIMO_RS16295 IPR003660 HAMP domain THIMO_RS16295 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS16295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS16295 IPR005467 Histidine kinase domain THIMO_RS16295 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS16295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS16295 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS16300 IPR001867 OmpR/PhoB-type DNA-binding domain THIMO_RS16300 IPR011006 CheY-like superfamily THIMO_RS16300 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS16300 IPR039420 Transcriptional regulatory protein WalR-like THIMO_RS16300 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS16300 IPR016032 Signal transduction response regulator, C-terminal effector THIMO_RS16315 IPR008995 Molybdate/tungstate binding, C-terminal THIMO_RS16315 IPR040582 MalK, OB fold domain THIMO_RS16315 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS16315 IPR003593 AAA+ ATPase domain THIMO_RS16315 IPR003439 ABC transporter-like THIMO_RS16315 IPR017871 ABC transporter, conserved site THIMO_RS16320 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS16320 IPR035906 MetI-like superfamily THIMO_RS16325 IPR035906 MetI-like superfamily THIMO_RS16325 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS16330 IPR006059 Bacterial extracellular solute-binding protein THIMO_RS16345 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 THIMO_RS16345 IPR005814 Aminotransferase class-III THIMO_RS16345 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA THIMO_RS16345 IPR015424 Pyridoxal phosphate-dependent transferase THIMO_RS16345 IPR015421 Pyridoxal phosphate-dependent transferase, major domain THIMO_RS16350 IPR011835 Bacterial/plant glycogen synthase THIMO_RS16350 IPR001296 Glycosyl transferase, family 1 THIMO_RS16350 IPR013534 Starch synthase, catalytic domain THIMO_RS16355 IPR014756 Immunoglobulin E-set THIMO_RS16355 IPR013783 Immunoglobulin-like fold THIMO_RS16355 IPR017853 Glycoside hydrolase superfamily THIMO_RS16355 IPR013780 Glycosyl hydrolase, all-beta THIMO_RS16355 IPR006047 Glycosyl hydrolase, family 13, catalytic domain THIMO_RS16355 IPR019492 Cyclo-malto-dextrinase, C-terminal THIMO_RS16355 IPR015171 Cyclomaltodextrinase, N-terminal THIMO_RS16365 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal THIMO_RS16365 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal THIMO_RS16365 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site THIMO_RS16365 IPR002986 Diaminopimelate decarboxylase, LysA THIMO_RS16365 IPR029066 PLP-binding barrel THIMO_RS16365 IPR000183 Ornithine/DAP/Arg decarboxylase THIMO_RS16365 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site THIMO_RS16365 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal THIMO_RS16375 IPR037493 Exodeoxyribonuclease III-like THIMO_RS16375 IPR020848 AP endonuclease 1, conserved site THIMO_RS16375 IPR004808 AP endonuclease 1 THIMO_RS16375 IPR036691 Endonuclease/exonuclease/phosphatase superfamily THIMO_RS16375 IPR005135 Endonuclease/exonuclease/phosphatase THIMO_RS16375 IPR020847 AP endonuclease 1, binding site THIMO_RS16380 IPR023404 Radical SAM, alpha/beta horseshoe THIMO_RS16380 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase THIMO_RS16380 IPR002792 TRAM domain THIMO_RS16380 IPR007197 Radical SAM THIMO_RS16380 IPR006467 MiaB-like tRNA modifying enzyme THIMO_RS16380 IPR038135 Methylthiotransferase, N-terminal domain superfamily THIMO_RS16380 IPR006638 Elp3/MiaB/NifB THIMO_RS16380 IPR005839 Methylthiotransferase THIMO_RS16380 IPR020612 Methylthiotransferase, conserved site THIMO_RS16380 IPR013848 Methylthiotransferase, N-terminal THIMO_RS16420 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain THIMO_RS16420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS16420 IPR004546 Restriction endonuclease, type I, HsdM THIMO_RS16420 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THIMO_RS16420 IPR003356 DNA methylase, adenine-specific THIMO_RS16420 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily THIMO_RS16435 IPR007711 Toxin HigB-1 THIMO_RS16435 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily THIMO_RS16460 IPR010982 Lambda repressor-like, DNA-binding domain superfamily THIMO_RS16460 IPR001387 Cro/C1-type helix-turn-helix domain THIMO_RS16460 IPR014057 Uncharacterized protein HI1420 THIMO_RS16480 IPR016192 APOBEC/CMP deaminase, zinc-binding THIMO_RS16480 IPR002125 Cytidine and deoxycytidylate deaminase domain THIMO_RS16480 IPR016193 Cytidine deaminase-like THIMO_RS16480 IPR028883 tRNA-specific adenosine deaminase THIMO_RS16490 IPR019777 Formate C-acetyltransferase glycine radical, conserved site THIMO_RS16490 IPR001150 Glycine radical domain THIMO_RS16490 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic THIMO_RS16490 IPR005144 ATP-cone domain THIMO_RS16520 IPR003356 DNA methylase, adenine-specific THIMO_RS16520 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THIMO_RS16520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS16535 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THIMO_RS16535 IPR029151 Periplasmic sensor-like domain superfamily THIMO_RS16535 IPR033479 Double Cache domain 1 THIMO_RS16535 IPR003660 HAMP domain THIMO_RS16555 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains THIMO_RS16555 IPR001036 Acriflavin resistance protein THIMO_RS16555 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 THIMO_RS16565 IPR025985 YnbE-like lipoprotein THIMO_RS16610 IPR001029 Flagellin, D0/D1 domain THIMO_RS16610 IPR013384 Flagellar hook-associated protein 3 THIMO_RS16615 IPR019776 Flagellar basal body rod protein, conserved site THIMO_RS16615 IPR010930 Flagellar basal-body/hook protein, C-terminal domain THIMO_RS16615 IPR001444 Flagellar basal body rod protein, N-terminal THIMO_RS16615 IPR002371 Flagellar hook-associated protein 1 THIMO_RS16620 IPR019301 Flagellar protein FlgJ, N-terminal THIMO_RS16620 IPR013377 Peptidoglycan hydrolase FlgJ THIMO_RS16620 IPR023346 Lysozyme-like domain superfamily THIMO_RS16620 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain THIMO_RS16630 IPR000527 Flagellar L-ring protein THIMO_RS16635 IPR020013 Flagellar hook-basal body protein, FlgE/F/G THIMO_RS16635 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like THIMO_RS16635 IPR001444 Flagellar basal body rod protein, N-terminal THIMO_RS16635 IPR019776 Flagellar basal body rod protein, conserved site THIMO_RS16635 IPR010930 Flagellar basal-body/hook protein, C-terminal domain THIMO_RS16635 IPR012834 Flagellar basal-body rod FlgG THIMO_RS16640 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like THIMO_RS16640 IPR010930 Flagellar basal-body/hook protein, C-terminal domain THIMO_RS16640 IPR020013 Flagellar hook-basal body protein, FlgE/F/G THIMO_RS16640 IPR001444 Flagellar basal body rod protein, N-terminal THIMO_RS16640 IPR019776 Flagellar basal body rod protein, conserved site THIMO_RS16645 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like THIMO_RS16645 IPR020013 Flagellar hook-basal body protein, FlgE/F/G THIMO_RS16645 IPR037058 Flagellar hook protein FlgE superfamily THIMO_RS16645 IPR001444 Flagellar basal body rod protein, N-terminal THIMO_RS16645 IPR010930 Flagellar basal-body/hook protein, C-terminal domain THIMO_RS16645 IPR019776 Flagellar basal body rod protein, conserved site THIMO_RS16645 IPR011491 Flagellar hook protein FlgE THIMO_RS16650 IPR005648 Flagellar hook capping protein THIMO_RS16650 IPR025965 FlgD Ig-like domain THIMO_RS16650 IPR025963 FlgD Tudor-like domain THIMO_RS16655 IPR010930 Flagellar basal-body/hook protein, C-terminal domain THIMO_RS16655 IPR006299 Flagellar basal-body rod protein FlgC THIMO_RS16655 IPR019776 Flagellar basal body rod protein, conserved site THIMO_RS16655 IPR001444 Flagellar basal body rod protein, N-terminal THIMO_RS16660 IPR006300 Flagellar basal-body rod protein FlgB THIMO_RS16660 IPR019776 Flagellar basal body rod protein, conserved site THIMO_RS16670 IPR011697 Peptidase C26 THIMO_RS16670 IPR017926 Glutamine amidotransferase THIMO_RS16670 IPR029062 Class I glutamine amidotransferase-like THIMO_RS16695 IPR010206 Poly(A) polymerase I THIMO_RS16695 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain THIMO_RS16695 IPR025866 Polymerase A arginine-rich C-terminal domain THIMO_RS16695 IPR002646 Poly A polymerase, head domain THIMO_RS16700 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily THIMO_RS16700 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK THIMO_RS16705 IPR040442 Pyruvate kinase-like domain superfamily THIMO_RS16705 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily THIMO_RS16705 IPR003700 Ketopantoate hydroxymethyltransferase THIMO_RS16710 IPR004821 Cytidyltransferase-like domain THIMO_RS16710 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain THIMO_RS16710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS16710 IPR003721 Pantoate-beta-alanine ligase THIMO_RS16715 IPR003190 Aspartate decarboxylase THIMO_RS16715 IPR009010 Aspartate decarboxylase-like domain superfamily THIMO_RS16720 IPR001296 Glycosyl transferase, family 1 THIMO_RS16720 IPR011835 Bacterial/plant glycogen synthase THIMO_RS16720 IPR013534 Starch synthase, catalytic domain THIMO_RS16725 IPR001282 Glucose-6-phosphate dehydrogenase THIMO_RS16725 IPR019796 Glucose-6-phosphate dehydrogenase, active site THIMO_RS16725 IPR036291 NAD(P)-binding domain superfamily THIMO_RS16725 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal THIMO_RS16725 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding THIMO_RS16730 IPR035482 Phosphoglucose isomerase, SIS domain 2 THIMO_RS16730 IPR035476 Phosphoglucose isomerase, SIS domain 1 THIMO_RS16730 IPR001672 Phosphoglucose isomerase (PGI) THIMO_RS16730 IPR023096 Phosphoglucose isomerase, C-terminal THIMO_RS16730 IPR018189 Phosphoglucose isomerase, conserved site THIMO_RS16735 IPR013153 PrkA AAA domain THIMO_RS16735 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS16735 IPR010650 PrkA C-terminal domain THIMO_RS16735 IPR016230 Serine-protein kinase, PrkA THIMO_RS16740 IPR006698 Uncharacterised protein family UPF0229 THIMO_RS16745 IPR007390 Sporulation stage V, protein R THIMO_RS16750 IPR005490 L,D-transpeptidase catalytic domain THIMO_RS16750 IPR038063 L,D-transpeptidase catalytic domain-like THIMO_RS16755 IPR011761 ATP-grasp fold THIMO_RS16755 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX THIMO_RS16755 IPR041107 RimK, PreATP-grasp domain THIMO_RS16755 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK THIMO_RS16755 IPR021109 Aspartic peptidase domain superfamily THIMO_RS16755 IPR013815 ATP-grasp fold, subdomain 1 THIMO_RS16755 IPR013651 ATP-grasp fold, RimK-type THIMO_RS16765 IPR002575 Aminoglycoside phosphotransferase THIMO_RS16765 IPR011009 Protein kinase-like domain superfamily THIMO_RS16780 IPR011010 DNA breaking-rejoining enzyme, catalytic core THIMO_RS16780 IPR013762 Integrase-like, catalytic domain superfamily THIMO_RS16780 IPR002104 Integrase, catalytic domain THIMO_RS16780 IPR010998 Integrase/recombinase, N-terminal THIMO_RS16780 IPR004107 Integrase, SAM-like, N-terminal THIMO_RS16780 IPR011946 Integrase, integron-type THIMO_RS16805 IPR029060 PIN-like domain superfamily THIMO_RS16805 IPR002716 PIN domain THIMO_RS16805 IPR022907 VapC family THIMO_RS16830 IPR002550 CNNM, transmembrane domain THIMO_RS16830 IPR000644 CBS domain THIMO_RS16840 IPR000763 Catalase-peroxidase haem THIMO_RS16840 IPR010255 Haem peroxidase superfamily THIMO_RS16840 IPR002016 Haem peroxidase THIMO_RS16840 IPR019794 Peroxidase, active site THIMO_RS16860 IPR019894 Patatin-related protein THIMO_RS16860 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase THIMO_RS16860 IPR002641 Patatin-like phospholipase domain THIMO_RS16860 IPR024282 Domain of unknown function DUF3376 THIMO_RS16865 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase THIMO_RS16865 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site THIMO_RS16865 IPR014776 Tetrapyrrole methylase, subdomain 2 THIMO_RS16865 IPR014777 Tetrapyrrole methylase, subdomain 1 THIMO_RS16865 IPR035996 Tetrapyrrole methylase superfamily THIMO_RS16865 IPR000878 Tetrapyrrole methylase THIMO_RS16875 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase THIMO_RS16875 IPR014777 Tetrapyrrole methylase, subdomain 1 THIMO_RS16875 IPR035996 Tetrapyrrole methylase superfamily THIMO_RS16875 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit THIMO_RS16875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS16875 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase THIMO_RS16875 IPR000878 Tetrapyrrole methylase THIMO_RS16880 IPR003723 Precorrin-6x reductase THIMO_RS16885 IPR035996 Tetrapyrrole methylase superfamily THIMO_RS16885 IPR014777 Tetrapyrrole methylase, subdomain 1 THIMO_RS16885 IPR014776 Tetrapyrrole methylase, subdomain 2 THIMO_RS16885 IPR006363 Precorrin-3B C17-methyltransferase domain THIMO_RS16885 IPR000878 Tetrapyrrole methylase THIMO_RS16890 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site THIMO_RS16890 IPR006364 Precorrin-2 C(20)-methyltransferase domain THIMO_RS16890 IPR035996 Tetrapyrrole methylase superfamily THIMO_RS16890 IPR000878 Tetrapyrrole methylase THIMO_RS16890 IPR012382 Precorrin-2 C(20)-methyltransferase THIMO_RS16890 IPR014776 Tetrapyrrole methylase, subdomain 2 THIMO_RS16890 IPR014777 Tetrapyrrole methylase, subdomain 1 THIMO_RS16895 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC THIMO_RS16895 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily THIMO_RS16900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS16900 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS16900 IPR006290 Heavy metal sensor kinase THIMO_RS16900 IPR003660 HAMP domain THIMO_RS16900 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS16900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS16900 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS16900 IPR005467 Histidine kinase domain THIMO_RS16905 IPR001867 OmpR/PhoB-type DNA-binding domain THIMO_RS16905 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS16905 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS16905 IPR011006 CheY-like superfamily THIMO_RS16905 IPR039420 Transcriptional regulatory protein WalR-like THIMO_RS16905 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response THIMO_RS16925 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily THIMO_RS16925 IPR000572 Oxidoreductase, molybdopterin-binding domain THIMO_RS16930 IPR016174 Di-haem cytochrome, transmembrane THIMO_RS16930 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase THIMO_RS16945 IPR016181 Acyl-CoA N-acyltransferase THIMO_RS16945 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD THIMO_RS16945 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal THIMO_RS16970 IPR036640 ABC transporter type 1, transmembrane domain superfamily THIMO_RS16970 IPR011527 ABC transporter type 1, transmembrane domain THIMO_RS16970 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS16970 IPR039421 Type I protein exporter THIMO_RS16970 IPR003593 AAA+ ATPase domain THIMO_RS16970 IPR017871 ABC transporter, conserved site THIMO_RS16970 IPR003439 ABC transporter-like THIMO_RS17035 IPR001962 Asparagine synthase THIMO_RS17035 IPR033738 Asparagine synthase, N-terminal domain THIMO_RS17035 IPR029055 Nucleophile aminohydrolases, N-terminal THIMO_RS17035 IPR017932 Glutamine amidotransferase type 2 domain THIMO_RS17035 IPR006426 Asparagine synthase, glutamine-hydrolyzing THIMO_RS17075 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like THIMO_RS17075 IPR001279 Metallo-beta-lactamase THIMO_RS17075 IPR017782 Hydroxyacylglutathione hydrolase THIMO_RS17075 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain THIMO_RS17075 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain THIMO_RS17080 IPR001093 IMP dehydrogenase/GMP reductase THIMO_RS17080 IPR015875 IMP dehydrogenase / GMP reductase, conserved site THIMO_RS17080 IPR005990 Inosine-5'-monophosphate dehydrogenase THIMO_RS17080 IPR000644 CBS domain THIMO_RS17080 IPR013785 Aldolase-type TIM barrel THIMO_RS17085 IPR025777 GMP synthetase ATP pyrophosphatase domain THIMO_RS17085 IPR001674 GMP synthase, C-terminal THIMO_RS17085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS17085 IPR004739 GMP synthase, glutamine amidotransferase THIMO_RS17085 IPR029062 Class I glutamine amidotransferase-like THIMO_RS17085 IPR017926 Glutamine amidotransferase THIMO_RS17085 IPR022310 NAD/GMP synthase THIMO_RS17085 IPR022955 GMP synthase THIMO_RS17095 IPR001509 NAD-dependent epimerase/dehydratase THIMO_RS17095 IPR036291 NAD(P)-binding domain superfamily THIMO_RS17100 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase THIMO_RS17100 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal THIMO_RS17100 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal THIMO_RS17100 IPR036291 NAD(P)-binding domain superfamily THIMO_RS17100 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THIMO_RS17100 IPR017476 UDP-glucose/GDP-mannose dehydrogenase THIMO_RS17100 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation THIMO_RS17100 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily THIMO_RS17105 IPR018485 Carbohydrate kinase, FGGY, C-terminal THIMO_RS17110 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF THIMO_RS17110 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 THIMO_RS17115 IPR013088 Zinc finger, NHR/GATA-type THIMO_RS17115 IPR005584 DNA gyrase inhibitor YacG THIMO_RS17120 IPR027462 Z ring-associated protein D, C-terminal THIMO_RS17120 IPR009777 Cell division protein ZapD THIMO_RS17120 IPR036268 ZapD domain superfamily THIMO_RS17125 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site THIMO_RS17125 IPR028579 Putative thymidine phosphorylase THIMO_RS17125 IPR017459 Glycosyl transferase family 3, N-terminal domain THIMO_RS17125 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily THIMO_RS17125 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal THIMO_RS17125 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily THIMO_RS17125 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily THIMO_RS17125 IPR013466 Thymidine phosphorylase/AMP phosphorylase THIMO_RS17125 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase THIMO_RS17125 IPR000312 Glycosyl transferase, family 3 THIMO_RS17130 IPR029057 Phosphoribosyltransferase-like THIMO_RS17130 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain THIMO_RS17130 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site THIMO_RS17130 IPR005946 Ribose-phosphate pyrophosphokinase THIMO_RS17130 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type THIMO_RS17130 IPR000836 Phosphoribosyltransferase domain THIMO_RS17135 IPR029072 YebC-like THIMO_RS17135 IPR026564 Transcriptional regulator TACO1-like, domain 3 THIMO_RS17135 IPR002876 Transcriptional regulator TACO1-like THIMO_RS17135 IPR017856 Integrase-like, N-terminal THIMO_RS17140 IPR036397 Ribonuclease H superfamily THIMO_RS17140 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site THIMO_RS17140 IPR002176 Crossover junction endodeoxyribonuclease RuvC THIMO_RS17140 IPR012337 Ribonuclease H-like superfamily THIMO_RS17145 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 THIMO_RS17145 IPR036267 RuvA, C-terminal domain superfamily THIMO_RS17145 IPR010994 RuvA domain 2-like THIMO_RS17145 IPR012340 Nucleic acid-binding, OB-fold THIMO_RS17145 IPR000085 Bacterial DNA recombination protein RuvA THIMO_RS17145 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial THIMO_RS17145 IPR011114 Holliday junction DNA helicase RuvA, C-terminal THIMO_RS17155 IPR011969 Clan AA aspartic peptidase, C-terminal THIMO_RS17155 IPR021109 Aspartic peptidase domain superfamily THIMO_RS17155 IPR001969 Aspartic peptidase, active site THIMO_RS17155 IPR034122 Retropepsin-like domain, bacterial THIMO_RS17160 IPR012000 Thiamine pyrophosphate enzyme, central domain THIMO_RS17160 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding THIMO_RS17160 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain THIMO_RS17160 IPR039368 Acetolactate synthase large subunit, TPP binding domain THIMO_RS17160 IPR029035 DHS-like NAD/FAD-binding domain superfamily THIMO_RS17160 IPR029061 Thiamin diphosphate-binding fold THIMO_RS17160 IPR012846 Acetolactate synthase, large subunit, biosynthetic THIMO_RS17170 IPR002068 Alpha crystallin/Hsp20 domain THIMO_RS17170 IPR008978 HSP20-like chaperone THIMO_RS17170 IPR031107 Small heat shock protein HSP20 THIMO_RS17175 IPR008978 HSP20-like chaperone THIMO_RS17175 IPR002068 Alpha crystallin/Hsp20 domain THIMO_RS17180 IPR038071 UROD/MetE-like superfamily THIMO_RS17180 IPR006361 Uroporphyrinogen decarboxylase HemE THIMO_RS17180 IPR000257 Uroporphyrinogen decarboxylase (URO-D) THIMO_RS17185 IPR009042 RNA polymerase sigma-70 region 1.2 THIMO_RS17185 IPR007627 RNA polymerase sigma-70 region 2 THIMO_RS17185 IPR007630 RNA polymerase sigma-70 region 4 THIMO_RS17185 IPR013325 RNA polymerase sigma factor, region 2 THIMO_RS17185 IPR013324 RNA polymerase sigma factor, region 3/4-like THIMO_RS17185 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria THIMO_RS17185 IPR014284 RNA polymerase sigma-70 like domain THIMO_RS17185 IPR000943 RNA polymerase sigma-70 THIMO_RS17190 IPR040690 FtsX, extracellular domain THIMO_RS17190 IPR004513 Cell division protein FtsX THIMO_RS17195 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS17195 IPR005286 Cell division protein FtsE, ATP-binding THIMO_RS17195 IPR017871 ABC transporter, conserved site THIMO_RS17195 IPR003439 ABC transporter-like THIMO_RS17195 IPR003593 AAA+ ATPase domain THIMO_RS17200 IPR003593 AAA+ ATPase domain THIMO_RS17200 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily THIMO_RS17200 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS17200 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain THIMO_RS17200 IPR036225 SRP/SRP receptor, N-terminal THIMO_RS17200 IPR013822 Signal recognition particle SRP54, helical bundle THIMO_RS17200 IPR004390 Signal-recognition particle receptor FtsY THIMO_RS17205 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like THIMO_RS17205 IPR011765 Peptidase M16, N-terminal THIMO_RS17205 IPR001431 Peptidase M16, zinc-binding site THIMO_RS17205 IPR007863 Peptidase M16, C-terminal THIMO_RS17210 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like THIMO_RS17210 IPR007863 Peptidase M16, C-terminal THIMO_RS17215 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THIMO_RS17215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS17215 IPR004398 RNA methyltransferase, RsmD THIMO_RS17220 IPR001980 Phosphopantetheine adenylyltransferase THIMO_RS17220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold THIMO_RS17220 IPR004821 Cytidyltransferase-like domain THIMO_RS17225 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS17225 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS17230 IPR036412 HAD-like superfamily THIMO_RS17230 IPR000150 Cof family THIMO_RS17230 IPR023214 HAD superfamily THIMO_RS17230 IPR006379 HAD-superfamily hydrolase, subfamily IIB THIMO_RS17235 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type THIMO_RS17235 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding THIMO_RS17235 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site THIMO_RS17235 IPR020629 Formamidopyrimidine-DNA glycosylase THIMO_RS17235 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain THIMO_RS17235 IPR035937 MutM-like, N-terminal THIMO_RS17235 IPR010663 Zinc finger, FPG/IleRS-type THIMO_RS17235 IPR010979 Ribosomal protein S13-like, H2TH THIMO_RS17245 IPR006847 Translation initiation factor IF-2, N-terminal THIMO_RS17245 IPR000795 Transcription factor, GTP-binding domain THIMO_RS17245 IPR000178 Translation initiation factor aIF-2, bacterial-like THIMO_RS17245 IPR009000 Translation protein, beta-barrel domain superfamily THIMO_RS17245 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS17245 IPR023115 Translation initiation factor IF- 2, domain 3 THIMO_RS17245 IPR015760 Translation initiation factor IF- 2 THIMO_RS17245 IPR005225 Small GTP-binding protein domain THIMO_RS17245 IPR036925 Translation initiation factor IF-2, domain 3 superfamily THIMO_RS17260 IPR036291 NAD(P)-binding domain superfamily THIMO_RS17260 IPR002347 Short-chain dehydrogenase/reductase SDR THIMO_RS17260 IPR020904 Short-chain dehydrogenase/reductase, conserved site THIMO_RS17270 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase THIMO_RS17270 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily THIMO_RS17285 IPR036412 HAD-like superfamily THIMO_RS17285 IPR002912 ACT domain THIMO_RS17285 IPR023190 Phosphoserine phosphatase, domain 2 THIMO_RS17285 IPR023214 HAD superfamily THIMO_RS17305 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific THIMO_RS17305 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site THIMO_RS17305 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain THIMO_RS17310 IPR004952 Uncharacterised protein family UPF0460 THIMO_RS17315 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis THIMO_RS17315 IPR034169 NifX-like domain THIMO_RS17315 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily THIMO_RS17320 IPR000510 Nitrogenase/oxidoreductase, component 1 THIMO_RS17320 IPR000318 Nitrogenase component 1, conserved site THIMO_RS17320 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein THIMO_RS17325 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE THIMO_RS17325 IPR000318 Nitrogenase component 1, conserved site THIMO_RS17325 IPR000510 Nitrogenase/oxidoreductase, component 1 THIMO_RS17340 IPR019999 Anthranilate synthase component I-like THIMO_RS17340 IPR005801 ADC synthase THIMO_RS17340 IPR006805 Anthranilate synthase component I, N-terminal THIMO_RS17340 IPR015890 Chorismate-utilising enzyme, C-terminal THIMO_RS17340 IPR005256 Anthranilate synthase component I, PabB-like THIMO_RS17345 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic THIMO_RS17345 IPR037512 Phosphoglycolate phosphatase, prokaryotic THIMO_RS17345 IPR006439 HAD hydrolase, subfamily IA THIMO_RS17345 IPR023214 HAD superfamily THIMO_RS17345 IPR036412 HAD-like superfamily THIMO_RS17345 IPR023198 Phosphoglycolate phosphatase-like, domain 2 THIMO_RS17345 IPR041492 Haloacid dehalogenase-like hydrolase THIMO_RS17350 IPR000056 Ribulose-phosphate 3-epimerase-like THIMO_RS17350 IPR011060 Ribulose-phosphate binding barrel THIMO_RS17350 IPR026019 Ribulose-phosphate 3-epimerase THIMO_RS17350 IPR013785 Aldolase-type TIM barrel THIMO_RS17355 IPR036812 NADP-dependent oxidoreductase domain superfamily THIMO_RS17355 IPR023210 NADP-dependent oxidoreductase domain THIMO_RS17355 IPR020471 Aldo/keto reductase THIMO_RS17360 IPR029057 Phosphoribosyltransferase-like THIMO_RS17360 IPR000836 Phosphoribosyltransferase domain THIMO_RS17360 IPR005222 Competence protein ComF THIMO_RS17370 IPR003593 AAA+ ATPase domain THIMO_RS17370 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS17370 IPR003439 ABC transporter-like THIMO_RS17370 IPR005892 Glycine betaine transport ATP-binding subunit THIMO_RS17370 IPR000644 CBS domain THIMO_RS17370 IPR017871 ABC transporter, conserved site THIMO_RS17375 IPR035906 MetI-like superfamily THIMO_RS17375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like THIMO_RS17380 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain THIMO_RS17390 IPR000060 BCCT transporter family THIMO_RS17410 IPR004027 SEC-C motif THIMO_RS17410 IPR036266 SecA, Wing/Scaffold superfamily THIMO_RS17410 IPR014018 SecA motor DEAD THIMO_RS17410 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS17410 IPR011115 SecA DEAD-like, N-terminal THIMO_RS17410 IPR011130 SecA, preprotein cross-linking domain THIMO_RS17410 IPR036670 SecA, preprotein cross-linking domain superfamily THIMO_RS17410 IPR000185 Protein translocase subunit SecA THIMO_RS17410 IPR011116 SecA Wing/Scaffold THIMO_RS17415 IPR042195 ArgJ beta chain, C-terminal domain THIMO_RS17415 IPR002813 Arginine biosynthesis protein ArgJ THIMO_RS17415 IPR016117 ArgJ-like domain superfamily THIMO_RS17420 IPR020084 NUDIX hydrolase, conserved site THIMO_RS17420 IPR015797 NUDIX hydrolase-like domain superfamily THIMO_RS17420 IPR020476 NUDIX hydrolase THIMO_RS17420 IPR000086 NUDIX hydrolase domain THIMO_RS17420 IPR003561 Mutator MutT THIMO_RS17425 IPR002818 DJ-1/PfpI THIMO_RS17425 IPR006287 Protein/nucleic acid deglycase DJ-1 THIMO_RS17425 IPR029062 Class I glutamine amidotransferase-like THIMO_RS17430 IPR001478 PDZ domain THIMO_RS17430 IPR029045 ClpP/crotonase-like domain superfamily THIMO_RS17430 IPR005151 Tail specific protease THIMO_RS17430 IPR004447 C-terminal-processing peptidase S41A THIMO_RS17430 IPR036034 PDZ superfamily THIMO_RS17435 IPR016047 Peptidase M23 THIMO_RS17435 IPR011055 Duplicated hybrid motif THIMO_RS17440 IPR001845 HTH ArsR-type DNA-binding domain THIMO_RS17440 IPR011991 ArsR-like helix-turn-helix domain THIMO_RS17440 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS17440 IPR036390 Winged helix DNA-binding domain superfamily THIMO_RS17445 IPR036873 Rhodanese-like domain superfamily THIMO_RS17445 IPR001763 Rhodanese-like domain THIMO_RS17450 IPR035958 SecB-like superfamily THIMO_RS17450 IPR003708 Bacterial protein export chaperone SecB THIMO_RS17455 IPR036291 NAD(P)-binding domain superfamily THIMO_RS17455 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal THIMO_RS17455 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal THIMO_RS17455 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent THIMO_RS17455 IPR013328 6-phosphogluconate dehydrogenase, domain 2 THIMO_RS17455 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily THIMO_RS17460 IPR001537 tRNA/rRNA methyltransferase, SpoU type THIMO_RS17460 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase THIMO_RS17460 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal THIMO_RS17460 IPR029028 Alpha/beta knot methyltransferases THIMO_RS17465 IPR001295 Dihydroorotate dehydrogenase, conserved site THIMO_RS17465 IPR033888 Dihydroorotate dehydrogenase, class 1B THIMO_RS17465 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 THIMO_RS17465 IPR013785 Aldolase-type TIM barrel THIMO_RS17465 IPR024920 Dihydroorotate dehydrogenase, class 1 THIMO_RS17465 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 THIMO_RS17465 IPR005720 Dihydroorotate dehydrogenase domain THIMO_RS17480 IPR002078 RNA polymerase sigma factor 54 interaction domain THIMO_RS17480 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS17480 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS17480 IPR010114 DNA-binding transcriptional regulator NtrC THIMO_RS17480 IPR025944 Sigma-54 interaction domain, conserved site THIMO_RS17480 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 THIMO_RS17480 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 THIMO_RS17480 IPR003593 AAA+ ATPase domain THIMO_RS17480 IPR002197 DNA binding HTH domain, Fis-type THIMO_RS17480 IPR011006 CheY-like superfamily THIMO_RS17480 IPR009057 Homeobox-like domain superfamily THIMO_RS17485 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS17485 IPR005467 Histidine kinase domain THIMO_RS17485 IPR000014 PAS domain THIMO_RS17485 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS17485 IPR013767 PAS fold THIMO_RS17485 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS17485 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS17485 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS17485 IPR035965 PAS domain superfamily THIMO_RS17495 IPR004809 Glutamine synthetase type I THIMO_RS17495 IPR027303 Glutamine synthetase, glycine-rich site THIMO_RS17495 IPR008146 Glutamine synthetase, catalytic domain THIMO_RS17495 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain THIMO_RS17495 IPR001637 Glutamine synthetase class-I, adenylation site THIMO_RS17495 IPR036651 Glutamine synthetase, N-terminal domain superfamily THIMO_RS17495 IPR008147 Glutamine synthetase, beta-Grasp domain THIMO_RS17495 IPR027302 Glutamine synthetase, N-terminal conserved site THIMO_RS17500 IPR002524 Cation efflux protein THIMO_RS17500 IPR036837 Cation efflux protein, cytoplasmic domain superfamily THIMO_RS17500 IPR027469 Cation efflux transmembrane domain superfamily THIMO_RS17500 IPR027470 Cation efflux protein, cytoplasmic domain THIMO_RS17505 IPR002310 Glycine-tRNA ligase, alpha subunit THIMO_RS17505 IPR006194 Glycine-tRNA synthetase, heterodimeric THIMO_RS17510 IPR006194 Glycine-tRNA synthetase, heterodimeric THIMO_RS17510 IPR015944 Glycine-tRNA ligase, beta subunit THIMO_RS17510 IPR008909 DALR anticodon binding THIMO_RS17515 IPR006549 HAD-superfamily hydrolase,subfamily IIIA THIMO_RS17515 IPR006543 Histidinol-phosphate phosphatase THIMO_RS17515 IPR036412 HAD-like superfamily THIMO_RS17515 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase THIMO_RS17515 IPR023214 HAD superfamily THIMO_RS17535 IPR003325 TerD domain THIMO_RS17545 IPR003325 TerD domain THIMO_RS17550 IPR003325 TerD domain THIMO_RS17555 IPR017115 Tellurite resistance, TerA THIMO_RS17555 IPR003325 TerD domain THIMO_RS17570 IPR011215 Phosphoribosyl transferase THIMO_RS17570 IPR028157 PELOTA RNA-binding domain THIMO_RS17580 IPR005835 Nucleotidyl transferase domain THIMO_RS17580 IPR029044 Nucleotide-diphospho-sugar transferases THIMO_RS17590 IPR005225 Small GTP-binding protein domain THIMO_RS17590 IPR006073 GTP binding domain THIMO_RS17590 IPR018948 GTP-binding protein TrmE, N-terminal THIMO_RS17590 IPR031168 TrmE-type guanine nucleotide-binding domain THIMO_RS17590 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 THIMO_RS17590 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS17590 IPR025867 MnmE, helical domain THIMO_RS17590 IPR027368 tRNA modification GTPase MnmE domain 2 THIMO_RS17590 IPR004520 tRNA modification GTPase MnmE THIMO_RS17595 IPR038210 Membrane insertase YidC, periplasmic domain THIMO_RS17595 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 THIMO_RS17595 IPR028053 Membrane insertase YidC, N-terminal THIMO_RS17595 IPR019998 Membrane insertase YidC THIMO_RS17595 IPR028055 Membrane insertase YidC/Oxa1, C-terminal THIMO_RS17595 IPR038221 YidC, periplasmic domain superfamily THIMO_RS17605 IPR002696 Putative membrane protein insertion efficiency factor THIMO_RS17765 IPR006127 Periplasmic solute binding protein, ZnuA-like THIMO_RS17765 IPR035520 High-affinity zinc uptake system protein ZnuA THIMO_RS17830 IPR001775 GspD/PilQ family THIMO_RS17830 IPR005644 NolW-like THIMO_RS17830 IPR013356 Type II secretion system GspD THIMO_RS17830 IPR004846 Type II/III secretion system THIMO_RS17830 IPR038591 NolW-like superfamily THIMO_RS17830 IPR004845 Type II secretion system GspD, conserved site THIMO_RS17935 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase THIMO_RS17935 IPR029056 Ribokinase-like THIMO_RS17935 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase THIMO_RS18030 IPR005186 FlaG protein THIMO_RS18030 IPR035924 FlaG-like superfamily THIMO_RS18045 IPR022781 Flagellar biosynthesis protein, FliO THIMO_RS18055 IPR002729 CRISPR-associated protein Cas1 THIMO_RS18055 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain THIMO_RS18055 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain THIMO_RS18070 IPR030915 Sporulation killing factor system, radical SAM maturase SkfB THIMO_RS18070 IPR007197 Radical SAM THIMO_RS18070 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site THIMO_RS18070 IPR023885 4Fe4S-binding SPASM domain THIMO_RS18070 IPR006638 Elp3/MiaB/NifB THIMO_RS18070 IPR013785 Aldolase-type TIM barrel THIMO_RS18090 IPR005102 Carbohydrate binding X2 domain THIMO_RS18090 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily THIMO_RS18090 IPR001956 Carbohydrate-binding module 3 THIMO_RS18090 IPR014756 Immunoglobulin E-set THIMO_RS18090 IPR015943 WD40/YVTN repeat-like-containing domain superfamily THIMO_RS18090 IPR036966 Carbohydrate-binding module 3 superfamily THIMO_RS18090 IPR013783 Immunoglobulin-like fold THIMO_RS18115 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG THIMO_RS18115 IPR007329 FMN-binding THIMO_RS18120 IPR001082 Fimbrial protein pilin THIMO_RS18120 IPR012902 Prokaryotic N-terminal methylation site THIMO_RS18125 IPR035919 EAL domain superfamily THIMO_RS18125 IPR029787 Nucleotide cyclase THIMO_RS18125 IPR001633 EAL domain THIMO_RS18125 IPR005330 MHYT domain THIMO_RS18125 IPR000160 GGDEF domain THIMO_RS18175 IPR036388 Winged helix-like DNA-binding domain superfamily THIMO_RS18175 IPR013324 RNA polymerase sigma factor, region 3/4-like THIMO_RS18175 IPR002852 Uncharacterised protein family UPF0251 THIMO_RS18180 IPR038731 Glycosyltransferase RgtA/B/C/D-like THIMO_RS18185 IPR033480 Single Cache domain 2 THIMO_RS18185 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain THIMO_RS18185 IPR003660 HAMP domain THIMO_RS18185 IPR004010 Double Cache domain 2 THIMO_RS18185 IPR004090 Chemotaxis methyl-accepting receptor THIMO_RS18185 IPR000727 Target SNARE coiled-coil homology domain THIMO_RS18220 IPR000477 Reverse transcriptase domain THIMO_RS18240 IPR011640 Ferrous iron transport protein B, C-terminal THIMO_RS18240 IPR030389 FeoB-type guanine nucleotide-binding (G) domain THIMO_RS18240 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain THIMO_RS18240 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS18240 IPR041069 FeoB, cytosolic helical domain THIMO_RS18240 IPR003373 Ferrous iron transport protein B THIMO_RS18245 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain THIMO_RS18245 IPR003373 Ferrous iron transport protein B THIMO_RS18245 IPR011640 Ferrous iron transport protein B, C-terminal THIMO_RS18245 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS18245 IPR005225 Small GTP-binding protein domain THIMO_RS18245 IPR030389 FeoB-type guanine nucleotide-binding (G) domain THIMO_RS18245 IPR041069 FeoB, cytosolic helical domain THIMO_RS18255 IPR001296 Glycosyl transferase, family 1 THIMO_RS18280 IPR035965 PAS domain superfamily THIMO_RS18280 IPR013656 PAS fold-4 THIMO_RS18280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS18280 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal THIMO_RS18280 IPR000780 MCP methyltransferase, CheR-type THIMO_RS18280 IPR000014 PAS domain THIMO_RS18280 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal THIMO_RS18280 IPR035909 Methylesterase CheB, C-terminal THIMO_RS18280 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase THIMO_RS18325 IPR001633 EAL domain THIMO_RS18325 IPR029787 Nucleotide cyclase THIMO_RS18325 IPR035919 EAL domain superfamily THIMO_RS18325 IPR000160 GGDEF domain THIMO_RS18325 IPR005330 MHYT domain THIMO_RS18350 IPR036852 Peptidase S8/S53 domain superfamily THIMO_RS18350 IPR034084 Thermitase-like, domain THIMO_RS18350 IPR023828 Peptidase S8, subtilisin, Ser-active site THIMO_RS18350 IPR022398 Peptidase S8, subtilisin, His-active site THIMO_RS18350 IPR023827 Peptidase S8, subtilisin, Asp-active site THIMO_RS18350 IPR015500 Peptidase S8, subtilisin-related THIMO_RS18350 IPR000209 Peptidase S8/S53 domain THIMO_RS18355 IPR001082 Fimbrial protein pilin THIMO_RS18355 IPR012902 Prokaryotic N-terminal methylation site THIMO_RS18375 IPR011010 DNA breaking-rejoining enzyme, catalytic core THIMO_RS18375 IPR013762 Integrase-like, catalytic domain superfamily THIMO_RS18375 IPR004107 Integrase, SAM-like, N-terminal THIMO_RS18375 IPR011946 Integrase, integron-type THIMO_RS18375 IPR002104 Integrase, catalytic domain THIMO_RS18375 IPR010998 Integrase/recombinase, N-terminal THIMO_RS18380 IPR011010 DNA breaking-rejoining enzyme, catalytic core THIMO_RS18380 IPR013762 Integrase-like, catalytic domain superfamily THIMO_RS18380 IPR002104 Integrase, catalytic domain THIMO_RS18380 IPR010998 Integrase/recombinase, N-terminal THIMO_RS18380 IPR004107 Integrase, SAM-like, N-terminal THIMO_RS18380 IPR011946 Integrase, integron-type THIMO_RS18385 IPR010920 LSM domain superfamily THIMO_RS18385 IPR006686 Mechanosensitive ion channel MscS, conserved site THIMO_RS18385 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 THIMO_RS18385 IPR023408 Mechanosensitive ion channel MscS domain superfamily THIMO_RS18385 IPR011066 Mechanosensitive ion channel MscS, C-terminal THIMO_RS18385 IPR006685 Mechanosensitive ion channel MscS THIMO_RS18400 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site THIMO_RS18400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS18400 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal THIMO_RS18400 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type THIMO_RS18400 IPR023545 rRNA small subunit methyltransferase F THIMO_RS18400 IPR023267 RNA (C5-cytosine) methyltransferase THIMO_RS18400 IPR011023 Nop2p THIMO_RS18400 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain THIMO_RS18410 IPR029787 Nucleotide cyclase THIMO_RS18410 IPR005330 MHYT domain THIMO_RS18410 IPR035919 EAL domain superfamily THIMO_RS18410 IPR001633 EAL domain THIMO_RS18410 IPR000160 GGDEF domain THIMO_RS18415 IPR019775 WD40 repeat, conserved site THIMO_RS18415 IPR015943 WD40/YVTN repeat-like-containing domain superfamily THIMO_RS18415 IPR001680 WD40 repeat THIMO_RS18415 IPR038765 Papain-like cysteine peptidase superfamily THIMO_RS18415 IPR020472 G-protein beta WD-40 repeat THIMO_RS18415 IPR027417 P-loop containing nucleoside triphosphate hydrolase THIMO_RS18415 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain THIMO_RS18415 IPR029030 Caspase-like domain superfamily THIMO_RS18415 IPR036322 WD40-repeat-containing domain superfamily THIMO_RS18415 IPR017986 WD40-repeat-containing domain THIMO_RS18435 IPR001633 EAL domain THIMO_RS18435 IPR029787 Nucleotide cyclase THIMO_RS18435 IPR035919 EAL domain superfamily THIMO_RS18435 IPR000160 GGDEF domain THIMO_RS18435 IPR005330 MHYT domain THIMO_RS18465 IPR009056 Cytochrome c-like domain THIMO_RS18465 IPR036909 Cytochrome c-like domain superfamily THIMO_RS18465 IPR002327 Cytochrome c, class IA/ IB THIMO_RS18485 IPR020568 Ribosomal protein S5 domain 2-type fold THIMO_RS18485 IPR027065 Lon protease THIMO_RS18485 IPR008269 Peptidase S16, Lon proteolytic domain THIMO_RS18485 IPR041699 Lon protease, AAA domain THIMO_RS18485 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup THIMO_RS18495 IPR012902 Prokaryotic N-terminal methylation site THIMO_RS18515 IPR011006 CheY-like superfamily THIMO_RS18515 IPR003660 HAMP domain THIMO_RS18515 IPR003594 Histidine kinase/HSP90-like ATPase THIMO_RS18515 IPR036890 Histidine kinase/HSP90-like ATPase superfamily THIMO_RS18515 IPR004358 Signal transduction histidine kinase-related protein, C-terminal THIMO_RS18515 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain THIMO_RS18515 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily THIMO_RS18515 IPR019247 Histidine kinase BarA, N-terminal THIMO_RS18515 IPR036641 HPT domain superfamily THIMO_RS18515 IPR005467 Histidine kinase domain THIMO_RS18515 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain THIMO_RS18515 IPR001789 Signal transduction response regulator, receiver domain THIMO_RS18520 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class THIMO_RS18520 IPR002941 DNA methylase N-4/N-6 THIMO_RS18520 IPR002052 DNA methylase, N-6 adenine-specific, conserved site THIMO_RS18520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase THIMO_RS18530 IPR035994 Nucleoside phosphorylase superfamily THIMO_RS18530 IPR000845 Nucleoside phosphorylase domain THIMO_RS18530 IPR010049 MTA/SAH nucleosidase THIMO_RS18555 IPR000719 Protein kinase domain THIMO_RS18555 IPR042095 Sulfatase-modifying factor enzyme superfamily THIMO_RS18555 IPR016187 C-type lectin fold THIMO_RS18555 IPR011009 Protein kinase-like domain superfamily THIMO_RS18555 IPR005532 Sulfatase-modifying factor enzyme THIMO_RS18605 IPR005628 General secretion pathway protein K THIMO_RS18605 IPR038072 GspK, central domain superfamily THIMO_RS18615 IPR004563 Apolipoprotein N-acyltransferase THIMO_RS18615 IPR036526 Carbon-nitrogen hydrolase superfamily THIMO_RS18615 IPR003010 Carbon-nitrogen hydrolase