THIMO_RS00030	PWY-7255	ergothioneine biosynthesis I (bacteria)
THIMO_RS00260	PWY-5839	menaquinol-7 biosynthesis
THIMO_RS00260	PWY-5844	menaquinol-9 biosynthesis
THIMO_RS00260	PWY-5849	menaquinol-6 biosynthesis
THIMO_RS00260	PWY-5890	menaquinol-10 biosynthesis
THIMO_RS00260	PWY-5891	menaquinol-11 biosynthesis
THIMO_RS00260	PWY-5892	menaquinol-12 biosynthesis
THIMO_RS00260	PWY-5895	menaquinol-13 biosynthesis
THIMO_RS00300	PWY-6902	chitin degradation II
THIMO_RS00325	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THIMO_RS00330	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THIMO_RS00330	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THIMO_RS00330	PWY-6897	thiamin salvage II
THIMO_RS00330	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
THIMO_RS00330	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
THIMO_RS00330	PWY-7356	thiamin salvage IV (yeast)
THIMO_RS00330	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THIMO_RS00355	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THIMO_RS00355	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THIMO_RS00415	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THIMO_RS00420	PWY-6164	3-dehydroquinate biosynthesis I
THIMO_RS00490	PWY-5941	glycogen degradation II (eukaryotic)
THIMO_RS00490	PWY-6731	starch degradation III
THIMO_RS00490	PWY-6737	starch degradation V
THIMO_RS00490	PWY-7238	sucrose biosynthesis II
THIMO_RS00575	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THIMO_RS00575	PWY-6164	3-dehydroquinate biosynthesis I
THIMO_RS00575	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THIMO_RS00640	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THIMO_RS00640	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THIMO_RS00645	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THIMO_RS00690	PWY-6683	sulfate reduction III (assimilatory)
THIMO_RS00695	PWY-5306	superpathway of thiosulfate metabolism (<i>Desulfovibrio sulfodismutans</i>)
THIMO_RS00695	PWY-5360	superpathway of tetrathionate reduction (<i>Salmonella typhimurium</i>)
THIMO_RS00695	PWY-6683	sulfate reduction III (assimilatory)
THIMO_RS00875	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THIMO_RS00875	PWY-6416	quinate degradation II
THIMO_RS00875	PWY-6707	gallate biosynthesis
THIMO_RS00905	PWY-6123	inosine-5'-phosphate biosynthesis I
THIMO_RS00905	PWY-6124	inosine-5'-phosphate biosynthesis II
THIMO_RS00905	PWY-7234	inosine-5'-phosphate biosynthesis III
THIMO_RS00915	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THIMO_RS00915	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THIMO_RS00915	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THIMO_RS00945	PWY-43	putrescine biosynthesis II
THIMO_RS01000	PWY-5269	cardiolipin biosynthesis II
THIMO_RS01000	PWY-5668	cardiolipin biosynthesis I
THIMO_RS01005	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THIMO_RS01005	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THIMO_RS01005	PWY-6896	thiamin salvage I
THIMO_RS01005	PWY-6897	thiamin salvage II
THIMO_RS01015	PWY-6167	flavin biosynthesis II (archaea)
THIMO_RS01015	PWY-6168	flavin biosynthesis III (fungi)
THIMO_RS01020	PWY-6167	flavin biosynthesis II (archaea)
THIMO_RS01020	PWY-6168	flavin biosynthesis III (fungi)
THIMO_RS01020	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THIMO_RS01025	PWY-6167	flavin biosynthesis II (archaea)
THIMO_RS01025	PWY-6168	flavin biosynthesis III (fungi)
THIMO_RS01025	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS01070	PWY-5372	carbon tetrachloride degradation II
THIMO_RS01070	PWY-6780	hydrogen production VI
THIMO_RS01130	PWY-5392	reductive TCA cycle II
THIMO_RS01130	PWY-5537	pyruvate fermentation to acetate V
THIMO_RS01130	PWY-5538	pyruvate fermentation to acetate VI
THIMO_RS01130	PWY-5690	TCA cycle II (plants and fungi)
THIMO_RS01130	PWY-5913	TCA cycle VI (obligate autotrophs)
THIMO_RS01130	PWY-6728	methylaspartate cycle
THIMO_RS01130	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THIMO_RS01130	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THIMO_RS01135	PWY-5172	acetyl-CoA biosynthesis III (from citrate)
THIMO_RS01135	PWY-5392	reductive TCA cycle II
THIMO_RS01135	PWY-5537	pyruvate fermentation to acetate V
THIMO_RS01135	PWY-5538	pyruvate fermentation to acetate VI
THIMO_RS01135	PWY-5690	TCA cycle II (plants and fungi)
THIMO_RS01135	PWY-5913	TCA cycle VI (obligate autotrophs)
THIMO_RS01135	PWY-6728	methylaspartate cycle
THIMO_RS01135	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THIMO_RS01135	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THIMO_RS01150	PWY-1622	formaldehyde assimilation I (serine pathway)
THIMO_RS01150	PWY-5392	reductive TCA cycle II
THIMO_RS01150	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THIMO_RS01150	PWY-5690	TCA cycle II (plants and fungi)
THIMO_RS01150	PWY-5913	TCA cycle VI (obligate autotrophs)
THIMO_RS01150	PWY-6728	methylaspartate cycle
THIMO_RS01150	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THIMO_RS01150	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THIMO_RS01150	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THIMO_RS01160	PWY-5392	reductive TCA cycle II
THIMO_RS01160	PWY-5537	pyruvate fermentation to acetate V
THIMO_RS01160	PWY-5538	pyruvate fermentation to acetate VI
THIMO_RS01160	PWY-5690	TCA cycle II (plants and fungi)
THIMO_RS01160	PWY-5913	TCA cycle VI (obligate autotrophs)
THIMO_RS01160	PWY-6728	methylaspartate cycle
THIMO_RS01160	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THIMO_RS01160	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THIMO_RS01165	PWY-5392	reductive TCA cycle II
THIMO_RS01165	PWY-5537	pyruvate fermentation to acetate V
THIMO_RS01165	PWY-5538	pyruvate fermentation to acetate VI
THIMO_RS01165	PWY-5690	TCA cycle II (plants and fungi)
THIMO_RS01165	PWY-5913	TCA cycle VI (obligate autotrophs)
THIMO_RS01165	PWY-6728	methylaspartate cycle
THIMO_RS01165	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THIMO_RS01165	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THIMO_RS01175	PWY-5913	TCA cycle VI (obligate autotrophs)
THIMO_RS01175	PWY-6549	L-glutamine biosynthesis III
THIMO_RS01175	PWY-6728	methylaspartate cycle
THIMO_RS01175	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THIMO_RS01175	PWY-7124	ethylene biosynthesis V (engineered)
THIMO_RS01175	PWY-7254	TCA cycle VII (acetate-producers)
THIMO_RS01175	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THIMO_RS01310	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS01430	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THIMO_RS01430	PWY-5686	UMP biosynthesis
THIMO_RS01430	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THIMO_RS01435	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THIMO_RS01435	PWY-5686	UMP biosynthesis
THIMO_RS01435	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THIMO_RS01635	PWY-6012	acyl carrier protein metabolism I
THIMO_RS01635	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
THIMO_RS01655	PWY-1622	formaldehyde assimilation I (serine pathway)
THIMO_RS01655	PWY-181	photorespiration
THIMO_RS01655	PWY-2161	folate polyglutamylation
THIMO_RS01655	PWY-2201	folate transformations I
THIMO_RS01655	PWY-3661	glycine betaine degradation I
THIMO_RS01655	PWY-3661-1	glycine betaine degradation II (mammalian)
THIMO_RS01655	PWY-3841	folate transformations II
THIMO_RS01655	PWY-5497	purine nucleobases degradation II (anaerobic)
THIMO_RS01665	PWY-5525	D-glucuronate degradation I
THIMO_RS01675	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THIMO_RS01675	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THIMO_RS01675	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
THIMO_RS01705	PWY-6823	molybdenum cofactor biosynthesis
THIMO_RS01785	PWY-6902	chitin degradation II
THIMO_RS01830	PWY-5101	L-isoleucine biosynthesis II
THIMO_RS01830	PWY-5103	L-isoleucine biosynthesis III
THIMO_RS01830	PWY-5104	L-isoleucine biosynthesis IV
THIMO_RS01830	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THIMO_RS01830	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THIMO_RS01830	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THIMO_RS01830	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THIMO_RS01835	PWY-5101	L-isoleucine biosynthesis II
THIMO_RS01835	PWY-5103	L-isoleucine biosynthesis III
THIMO_RS01835	PWY-5104	L-isoleucine biosynthesis IV
THIMO_RS01835	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THIMO_RS01835	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THIMO_RS01835	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THIMO_RS01835	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THIMO_RS01840	PWY-5103	L-isoleucine biosynthesis III
THIMO_RS01840	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THIMO_RS01960	PWY-2722	trehalose degradation IV
THIMO_RS01960	PWY-2723	trehalose degradation V
THIMO_RS01960	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THIMO_RS01960	PWY-5661	GDP-glucose biosynthesis
THIMO_RS01960	PWY-621	sucrose degradation III (sucrose invertase)
THIMO_RS01960	PWY-7238	sucrose biosynthesis II
THIMO_RS01960	PWY-7385	1,3-propanediol biosynthesis (engineered)
THIMO_RS01975	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THIMO_RS01975	PWY-6855	chitin degradation I (archaea)
THIMO_RS01975	PWY-6906	chitin derivatives degradation
THIMO_RS01980	PWY-5964	guanylyl molybdenum cofactor biosynthesis
THIMO_RS01980	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
THIMO_RS02065	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THIMO_RS02065	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THIMO_RS02065	PWY-5989	stearate biosynthesis II (bacteria and plants)
THIMO_RS02065	PWY-6113	superpathway of mycolate biosynthesis
THIMO_RS02065	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THIMO_RS02065	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THIMO_RS02065	PWY-7663	gondoate biosynthesis (anaerobic)
THIMO_RS02065	PWY-7664	oleate biosynthesis IV (anaerobic)
THIMO_RS02065	PWYG-321	mycolate biosynthesis
THIMO_RS02205	PWY-3781	aerobic respiration I (cytochrome c)
THIMO_RS02205	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THIMO_RS02205	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THIMO_RS02205	PWY-5690	TCA cycle II (plants and fungi)
THIMO_RS02205	PWY-6728	methylaspartate cycle
THIMO_RS02205	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THIMO_RS02205	PWY-7254	TCA cycle VII (acetate-producers)
THIMO_RS02205	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THIMO_RS02210	PWY-3781	aerobic respiration I (cytochrome c)
THIMO_RS02210	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THIMO_RS02210	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THIMO_RS02210	PWY-5690	TCA cycle II (plants and fungi)
THIMO_RS02210	PWY-6728	methylaspartate cycle
THIMO_RS02210	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THIMO_RS02210	PWY-7254	TCA cycle VII (acetate-producers)
THIMO_RS02210	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THIMO_RS02310	PWY-5386	methylglyoxal degradation I
THIMO_RS02335	PWY-2201	folate transformations I
THIMO_RS02335	PWY-3841	folate transformations II
THIMO_RS02370	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
THIMO_RS02370	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
THIMO_RS02370	PWY-6269	adenosylcobalamin salvage from cobinamide II
THIMO_RS02375	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
THIMO_RS02445	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
THIMO_RS02655	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
THIMO_RS02655	PWY-5368	dimorphecolate biosynthesis
THIMO_RS02655	PWY-5995	linoleate biosynthesis I (plants)
THIMO_RS02655	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
THIMO_RS02655	PWY-6803	phosphatidylcholine acyl editing
THIMO_RS02655	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
THIMO_RS02655	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
THIMO_RS02655	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
THIMO_RS02655	PWY-7470	phosphatidylcholine biosynthesis VII
THIMO_RS02655	PWY-7618	ricinoleate biosynthesis
THIMO_RS02665	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THIMO_RS02665	PWY-6148	tetrahydromethanopterin biosynthesis
THIMO_RS02665	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THIMO_RS02665	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THIMO_RS02670	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THIMO_RS02670	PWY-6148	tetrahydromethanopterin biosynthesis
THIMO_RS02670	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THIMO_RS02670	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THIMO_RS02750	PWY-6703	preQ<sub>0</sub> biosynthesis
THIMO_RS02775	PWY-1042	glycolysis IV (plant cytosol)
THIMO_RS02775	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS02775	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THIMO_RS02775	PWY-7003	glycerol degradation to butanol
THIMO_RS02850	PWY-3781	aerobic respiration I (cytochrome c)
THIMO_RS02850	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THIMO_RS02850	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THIMO_RS02850	PWY-6692	Fe(II) oxidation
THIMO_RS02955	PWY-5381	pyridine nucleotide cycling (plants)
THIMO_RS02960	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
THIMO_RS02960	PWY-2201	folate transformations I
THIMO_RS02960	PWY-3841	folate transformations II
THIMO_RS02960	PWY-5030	L-histidine degradation III
THIMO_RS02960	PWY-5497	purine nucleobases degradation II (anaerobic)
THIMO_RS02960	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
THIMO_RS03190	PWY-5723	Rubisco shunt
THIMO_RS03255	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THIMO_RS03260	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THIMO_RS03305	PWY-6123	inosine-5'-phosphate biosynthesis I
THIMO_RS03305	PWY-7234	inosine-5'-phosphate biosynthesis III
THIMO_RS03400	PWY-6871	3-methylbutanol biosynthesis
THIMO_RS03415	PWY-6825	phosphatidylcholine biosynthesis V
THIMO_RS03420	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THIMO_RS03420	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THIMO_RS03420	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THIMO_RS03420	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THIMO_RS03470	PWY-5667	CDP-diacylglycerol biosynthesis I
THIMO_RS03470	PWY-5981	CDP-diacylglycerol biosynthesis III
THIMO_RS03475	PWY-7294	xylose degradation IV
THIMO_RS03475	PWY-7295	L-arabinose degradation IV
THIMO_RS03475	PWY-7560	methylerythritol phosphate pathway II
THIMO_RS03500	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THIMO_RS03500	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THIMO_RS03500	PWY-5989	stearate biosynthesis II (bacteria and plants)
THIMO_RS03500	PWY-5994	palmitate biosynthesis I (animals and fungi)
THIMO_RS03500	PWY-6113	superpathway of mycolate biosynthesis
THIMO_RS03500	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THIMO_RS03500	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THIMO_RS03500	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THIMO_RS03500	PWY-7663	gondoate biosynthesis (anaerobic)
THIMO_RS03500	PWY-7664	oleate biosynthesis IV (anaerobic)
THIMO_RS03500	PWYG-321	mycolate biosynthesis
THIMO_RS03510	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THIMO_RS03510	PWY-622	starch biosynthesis
THIMO_RS03550	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THIMO_RS03550	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THIMO_RS03550	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS03550	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
THIMO_RS03555	PWY-6749	CMP-legionaminate biosynthesis I
THIMO_RS03560	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THIMO_RS03560	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THIMO_RS03570	PWY-5686	UMP biosynthesis
THIMO_RS03595	PWY-3341	L-proline biosynthesis III
THIMO_RS03595	PWY-4981	L-proline biosynthesis II (from arginine)
THIMO_RS03595	PWY-6344	L-ornithine degradation II (Stickland reaction)
THIMO_RS03600	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THIMO_RS03605	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
THIMO_RS03625	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS03650	PWY-6123	inosine-5'-phosphate biosynthesis I
THIMO_RS03650	PWY-6124	inosine-5'-phosphate biosynthesis II
THIMO_RS03650	PWY-7234	inosine-5'-phosphate biosynthesis III
THIMO_RS03660	PWY-5386	methylglyoxal degradation I
THIMO_RS03665	PWY-6891	thiazole biosynthesis II (Bacillus)
THIMO_RS03665	PWY-6892	thiazole biosynthesis I (E. coli)
THIMO_RS03665	PWY-7560	methylerythritol phosphate pathway II
THIMO_RS03675	PWY-5532	adenosine nucleotides degradation IV
THIMO_RS03675	PWY-5723	Rubisco shunt
THIMO_RS03680	PWY-5532	adenosine nucleotides degradation IV
THIMO_RS03680	PWY-5723	Rubisco shunt
THIMO_RS03695	PWY-6891	thiazole biosynthesis II (Bacillus)
THIMO_RS03695	PWY-6892	thiazole biosynthesis I (E. coli)
THIMO_RS03695	PWY-7560	methylerythritol phosphate pathway II
THIMO_RS04005	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS04005	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS04045	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS04170	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
THIMO_RS04175	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
THIMO_RS04185	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
THIMO_RS04210	PWY-5532	adenosine nucleotides degradation IV
THIMO_RS04210	PWY-5723	Rubisco shunt
THIMO_RS04225	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
THIMO_RS04225	PWY-6174	mevalonate pathway II (archaea)
THIMO_RS04225	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
THIMO_RS04225	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
THIMO_RS04225	PWY-7102	bisabolene biosynthesis
THIMO_RS04225	PWY-7391	isoprene biosynthesis II (engineered)
THIMO_RS04225	PWY-7524	mevalonate pathway III (archaea)
THIMO_RS04225	PWY-7560	methylerythritol phosphate pathway II
THIMO_RS04225	PWY-922	mevalonate pathway I
THIMO_RS04395	PWY-6936	seleno-amino acid biosynthesis
THIMO_RS04450	PWY-4381	fatty acid biosynthesis initiation I
THIMO_RS04450	PWY-5743	3-hydroxypropanoate cycle
THIMO_RS04450	PWY-5744	glyoxylate assimilation
THIMO_RS04450	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THIMO_RS04450	PWY-6679	jadomycin biosynthesis
THIMO_RS04450	PWY-6722	candicidin biosynthesis
THIMO_RS04450	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THIMO_RS04660	PWY-5659	GDP-mannose biosynthesis
THIMO_RS04660	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
THIMO_RS04665	PWY-6749	CMP-legionaminate biosynthesis I
THIMO_RS04830	PWY-6986	alginate degradation
THIMO_RS04830	PWY-7651	heparan sulfate degradation
THIMO_RS04835	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
THIMO_RS04945	PWY-4081	glutathione redox reactions I
THIMO_RS05000	PWY-6672	<i>cis</i>-genanyl-CoA degradation
THIMO_RS05000	PWY-7118	chitin degradation to ethanol
THIMO_RS05010	PWY-6728	methylaspartate cycle
THIMO_RS05010	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THIMO_RS05010	PWY-7118	chitin degradation to ethanol
THIMO_RS05010	PWY-7294	xylose degradation IV
THIMO_RS05010	PWY-7295	L-arabinose degradation IV
THIMO_RS05025	PWY-6700	queuosine biosynthesis
THIMO_RS05040	PWY-6700	queuosine biosynthesis
THIMO_RS05060	PWY-2301	<i>myo</i>-inositol biosynthesis
THIMO_RS05060	PWY-4702	phytate degradation I
THIMO_RS05060	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
THIMO_RS05065	PWY-6004	glycine betaine biosynthesis V (from glycine)
THIMO_RS05070	PWY-6936	seleno-amino acid biosynthesis
THIMO_RS05070	PWY-7274	D-cycloserine biosynthesis
THIMO_RS05080	PWY-2201	folate transformations I
THIMO_RS05095	PWY-4983	L-citrulline-nitric oxide cycle
THIMO_RS05095	PWY-4984	urea cycle
THIMO_RS05095	PWY-5	canavanine biosynthesis
THIMO_RS05095	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THIMO_RS05095	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THIMO_RS05115	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THIMO_RS05115	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THIMO_RS05130	PWY-3841	folate transformations II
THIMO_RS05130	PWY-6614	tetrahydrofolate biosynthesis
THIMO_RS05140	PWY-5381	pyridine nucleotide cycling (plants)
THIMO_RS05140	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THIMO_RS05145	PWY-3341	L-proline biosynthesis III
THIMO_RS05145	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THIMO_RS05165	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
THIMO_RS05165	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THIMO_RS05175	PWY-6891	thiazole biosynthesis II (Bacillus)
THIMO_RS05175	PWY-6892	thiazole biosynthesis I (E. coli)
THIMO_RS05175	PWY-7560	methylerythritol phosphate pathway II
THIMO_RS05250	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THIMO_RS05295	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THIMO_RS05295	PWY-5491	diethylphosphate degradation
THIMO_RS05390	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS05390	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS05445	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
THIMO_RS05445	PWY-6167	flavin biosynthesis II (archaea)
THIMO_RS05445	PWY-6168	flavin biosynthesis III (fungi)
THIMO_RS05590	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS05600	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS05610	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THIMO_RS05610	PWY-5667	CDP-diacylglycerol biosynthesis I
THIMO_RS05610	PWY-6453	stigma estolide biosynthesis
THIMO_RS05610	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
THIMO_RS05610	PWY-7587	oleate biosynthesis III (cyanobacteria)
THIMO_RS05615	PWY-6749	CMP-legionaminate biosynthesis I
THIMO_RS05620	PWY-5958	acridone alkaloid biosynthesis
THIMO_RS05620	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THIMO_RS05620	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THIMO_RS05645	PWY-6834	spermidine biosynthesis III
THIMO_RS05680	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THIMO_RS05680	PWY-5723	Rubisco shunt
THIMO_RS05725	PWY-1042	glycolysis IV (plant cytosol)
THIMO_RS05725	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THIMO_RS05725	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS05725	PWY-7385	1,3-propanediol biosynthesis (engineered)
THIMO_RS05760	PWY-5340	sulfate activation for sulfonation
THIMO_RS05790	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THIMO_RS05790	PWY-6164	3-dehydroquinate biosynthesis I
THIMO_RS05790	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THIMO_RS05800	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THIMO_RS05800	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THIMO_RS05800	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THIMO_RS05800	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THIMO_RS05800	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS05800	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS05800	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THIMO_RS05800	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THIMO_RS05825	PWY-5278	sulfite oxidation III
THIMO_RS05825	PWY-5279	sulfite oxidation II
THIMO_RS05845	PWY-5162	2-oxopentenoate degradation
THIMO_RS05900	PWY-5392	reductive TCA cycle II
THIMO_RS05900	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THIMO_RS05900	PWY-5690	TCA cycle II (plants and fungi)
THIMO_RS05900	PWY-5913	TCA cycle VI (obligate autotrophs)
THIMO_RS05900	PWY-6728	methylaspartate cycle
THIMO_RS05900	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THIMO_RS05900	PWY-7254	TCA cycle VII (acetate-producers)
THIMO_RS05900	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THIMO_RS05950	PWY-6825	phosphatidylcholine biosynthesis V
THIMO_RS06015	PWY-6349	CDP-archaeol biosynthesis
THIMO_RS06040	PWY-1622	formaldehyde assimilation I (serine pathway)
THIMO_RS06040	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THIMO_RS06040	PWY-5913	TCA cycle VI (obligate autotrophs)
THIMO_RS06040	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THIMO_RS06040	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
THIMO_RS06040	PWY-6549	L-glutamine biosynthesis III
THIMO_RS06040	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THIMO_RS06040	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THIMO_RS06040	PWY-7124	ethylene biosynthesis V (engineered)
THIMO_RS06175	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
THIMO_RS06175	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
THIMO_RS06210	PWY-6871	3-methylbutanol biosynthesis
THIMO_RS06235	PWY-3461	L-tyrosine biosynthesis II
THIMO_RS06235	PWY-3462	L-phenylalanine biosynthesis II
THIMO_RS06235	PWY-6120	L-tyrosine biosynthesis III
THIMO_RS06235	PWY-6627	salinosporamide A biosynthesis
THIMO_RS06235	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
THIMO_RS06235	PWY-7626	bacilysin biosynthesis
THIMO_RS06245	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
THIMO_RS06305	PWY-3341	L-proline biosynthesis III
THIMO_RS06305	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THIMO_RS06325	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
THIMO_RS06325	PWY-7177	UTP and CTP dephosphorylation II
THIMO_RS06325	PWY-7185	UTP and CTP dephosphorylation I
THIMO_RS06330	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THIMO_RS06330	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THIMO_RS06335	PWY-1042	glycolysis IV (plant cytosol)
THIMO_RS06335	PWY-1622	formaldehyde assimilation I (serine pathway)
THIMO_RS06335	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THIMO_RS06335	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS06335	PWY-5723	Rubisco shunt
THIMO_RS06335	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THIMO_RS06335	PWY-6886	1-butanol autotrophic biosynthesis
THIMO_RS06335	PWY-6901	superpathway of glucose and xylose degradation
THIMO_RS06335	PWY-7003	glycerol degradation to butanol
THIMO_RS06335	PWY-7124	ethylene biosynthesis V (engineered)
THIMO_RS06335	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THIMO_RS06345	PWY-7560	methylerythritol phosphate pathway II
THIMO_RS06350	PWY-7560	methylerythritol phosphate pathway II
THIMO_RS06365	PWY-5381	pyridine nucleotide cycling (plants)
THIMO_RS06365	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THIMO_RS06365	PWY-6596	adenosine nucleotides degradation I
THIMO_RS06365	PWY-6606	guanosine nucleotides degradation II
THIMO_RS06365	PWY-6607	guanosine nucleotides degradation I
THIMO_RS06365	PWY-6608	guanosine nucleotides degradation III
THIMO_RS06365	PWY-7185	UTP and CTP dephosphorylation I
THIMO_RS06405	PWY-3781	aerobic respiration I (cytochrome c)
THIMO_RS06405	PWY-4521	arsenite oxidation I (respiratory)
THIMO_RS06405	PWY-6692	Fe(II) oxidation
THIMO_RS06405	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THIMO_RS06410	PWY-3781	aerobic respiration I (cytochrome c)
THIMO_RS06410	PWY-4521	arsenite oxidation I (respiratory)
THIMO_RS06410	PWY-6692	Fe(II) oxidation
THIMO_RS06410	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THIMO_RS06445	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THIMO_RS06445	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
THIMO_RS06450	PWY-3961	phosphopantothenate biosynthesis II
THIMO_RS06510	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THIMO_RS06510	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THIMO_RS06515	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THIMO_RS06515	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THIMO_RS06540	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
THIMO_RS06540	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
THIMO_RS06540	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
THIMO_RS06540	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
THIMO_RS06540	PWY-6978	plastoquinol-9 biosynthesis II
THIMO_RS06580	PWY-7158	L-phenylalanine degradation V
THIMO_RS06590	PWY-5674	nitrate reduction IV (dissimilatory)
THIMO_RS06630	PWY-7731	THIMO_RS06630
THIMO_RS06660	PWY-1622	formaldehyde assimilation I (serine pathway)
THIMO_RS06660	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS06745	PWY-4321	L-glutamate degradation IV
THIMO_RS06875	PWY-723	alkylnitronates degradation
THIMO_RS06880	PWY-6012	acyl carrier protein metabolism I
THIMO_RS06880	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
THIMO_RS06960	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THIMO_RS06960	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
THIMO_RS06960	PWY-6936	seleno-amino acid biosynthesis
THIMO_RS06960	PWY-702	L-methionine biosynthesis II
THIMO_RS06965	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THIMO_RS06965	PWY-6148	tetrahydromethanopterin biosynthesis
THIMO_RS06965	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THIMO_RS06965	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THIMO_RS07020	PWY-2201	folate transformations I
THIMO_RS07025	PWY-6123	inosine-5'-phosphate biosynthesis I
THIMO_RS07025	PWY-6124	inosine-5'-phosphate biosynthesis II
THIMO_RS07025	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS07025	PWY-7234	inosine-5'-phosphate biosynthesis III
THIMO_RS07120	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS07125	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS07245	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THIMO_RS07280	PWY-6854	ethylene biosynthesis III (microbes)
THIMO_RS07285	PWY-6854	ethylene biosynthesis III (microbes)
THIMO_RS07380	PWY-6891	thiazole biosynthesis II (Bacillus)
THIMO_RS07380	PWY-6892	thiazole biosynthesis I (E. coli)
THIMO_RS07380	PWY-7560	methylerythritol phosphate pathway II
THIMO_RS07585	PWY-101	photosynthesis light reactions
THIMO_RS07585	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
THIMO_RS07710	PWY-6936	seleno-amino acid biosynthesis
THIMO_RS07750	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THIMO_RS07750	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THIMO_RS07775	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THIMO_RS07775	PWY-5723	Rubisco shunt
THIMO_RS07795	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THIMO_RS07795	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
THIMO_RS07800	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THIMO_RS07800	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THIMO_RS07800	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THIMO_RS07805	PWY-5269	cardiolipin biosynthesis II
THIMO_RS07805	PWY-5668	cardiolipin biosynthesis I
THIMO_RS07815	PWY-7731	THIMO_RS07815
THIMO_RS07860	PWY-5676	acetyl-CoA fermentation to butanoate II
THIMO_RS07860	PWY-5741	ethylmalonyl-CoA pathway
THIMO_RS07860	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
THIMO_RS07870	PWY-3781	aerobic respiration I (cytochrome c)
THIMO_RS07870	PWY-6692	Fe(II) oxidation
THIMO_RS07870	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
THIMO_RS07870	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THIMO_RS08020	PWY-7039	phosphatidate metabolism, as a signaling molecule
THIMO_RS08030	PWY-6823	molybdenum cofactor biosynthesis
THIMO_RS08080	PWY-6938	NADH repair
THIMO_RS08085	PWY-4983	L-citrulline-nitric oxide cycle
THIMO_RS08085	PWY-4984	urea cycle
THIMO_RS08085	PWY-5	canavanine biosynthesis
THIMO_RS08085	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THIMO_RS08085	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THIMO_RS08100	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THIMO_RS08100	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THIMO_RS08100	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THIMO_RS08100	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THIMO_RS08100	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS08100	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS08100	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THIMO_RS08100	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THIMO_RS08125	PWY-5057	L-valine degradation II
THIMO_RS08125	PWY-5076	L-leucine degradation III
THIMO_RS08125	PWY-5078	L-isoleucine degradation II
THIMO_RS08125	PWY-5101	L-isoleucine biosynthesis II
THIMO_RS08125	PWY-5103	L-isoleucine biosynthesis III
THIMO_RS08125	PWY-5104	L-isoleucine biosynthesis IV
THIMO_RS08125	PWY-5108	L-isoleucine biosynthesis V
THIMO_RS08170	PWY-5686	UMP biosynthesis
THIMO_RS08175	PWY-3801	sucrose degradation II (sucrose synthase)
THIMO_RS08175	PWY-6527	stachyose degradation
THIMO_RS08175	PWY-7238	sucrose biosynthesis II
THIMO_RS08175	PWY-7343	UDP-glucose biosynthesis
THIMO_RS08275	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
THIMO_RS08280	PWY-5316	nicotine biosynthesis
THIMO_RS08280	PWY-5381	pyridine nucleotide cycling (plants)
THIMO_RS08280	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THIMO_RS08280	PWY-7342	superpathway of nicotine biosynthesis
THIMO_RS08510	PWY-5663	tetrahydrobiopterin biosynthesis I
THIMO_RS08510	PWY-5664	tetrahydrobiopterin biosynthesis II
THIMO_RS08510	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THIMO_RS08510	PWY-6703	preQ<sub>0</sub> biosynthesis
THIMO_RS08510	PWY-6983	tetrahydrobiopterin biosynthesis III
THIMO_RS08510	PWY-7442	drosopterin and aurodrosopterin biosynthesis
THIMO_RS08595	PWY-5663	tetrahydrobiopterin biosynthesis I
THIMO_RS08595	PWY-5664	tetrahydrobiopterin biosynthesis II
THIMO_RS08595	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THIMO_RS08595	PWY-6703	preQ<sub>0</sub> biosynthesis
THIMO_RS08595	PWY-6983	tetrahydrobiopterin biosynthesis III
THIMO_RS08595	PWY-7442	drosopterin and aurodrosopterin biosynthesis
THIMO_RS08625	PWY-6700	queuosine biosynthesis
THIMO_RS08645	PWY-5392	reductive TCA cycle II
THIMO_RS08645	PWY-5537	pyruvate fermentation to acetate V
THIMO_RS08645	PWY-5538	pyruvate fermentation to acetate VI
THIMO_RS08645	PWY-5690	TCA cycle II (plants and fungi)
THIMO_RS08645	PWY-5913	TCA cycle VI (obligate autotrophs)
THIMO_RS08645	PWY-6728	methylaspartate cycle
THIMO_RS08645	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THIMO_RS08645	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THIMO_RS08920	PWY-6454	vancomycin resistance I
THIMO_RS08920	PWY-6455	vancomycin resistance II
THIMO_RS08970	PWY-5674	nitrate reduction IV (dissimilatory)
THIMO_RS08975	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THIMO_RS08980	PWY-7205	CMP phosphorylation
THIMO_RS09055	PWY-2201	folate transformations I
THIMO_RS09060	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THIMO_RS09060	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
THIMO_RS09060	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THIMO_RS09060	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS09060	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
THIMO_RS09060	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THIMO_RS09060	PWY-7205	CMP phosphorylation
THIMO_RS09060	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THIMO_RS09060	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS09060	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS09060	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS09060	PWY-7224	purine deoxyribonucleosides salvage
THIMO_RS09060	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THIMO_RS09060	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THIMO_RS09095	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THIMO_RS09095	PWY-5491	diethylphosphate degradation
THIMO_RS09160	PWY-5941	glycogen degradation II (eukaryotic)
THIMO_RS09160	PWY-6731	starch degradation III
THIMO_RS09160	PWY-6737	starch degradation V
THIMO_RS09160	PWY-7238	sucrose biosynthesis II
THIMO_RS09205	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THIMO_RS09205	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THIMO_RS09205	PWY-5989	stearate biosynthesis II (bacteria and plants)
THIMO_RS09205	PWY-5994	palmitate biosynthesis I (animals and fungi)
THIMO_RS09205	PWY-6113	superpathway of mycolate biosynthesis
THIMO_RS09205	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THIMO_RS09205	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THIMO_RS09205	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THIMO_RS09205	PWY-7663	gondoate biosynthesis (anaerobic)
THIMO_RS09205	PWY-7664	oleate biosynthesis IV (anaerobic)
THIMO_RS09205	PWYG-321	mycolate biosynthesis
THIMO_RS09245	PWY-1281	sulfoacetaldehyde degradation I
THIMO_RS09245	PWY-5482	pyruvate fermentation to acetate II
THIMO_RS09245	PWY-5485	pyruvate fermentation to acetate IV
THIMO_RS09245	PWY-5497	purine nucleobases degradation II (anaerobic)
THIMO_RS09245	PWY-6637	sulfolactate degradation II
THIMO_RS09250	PWY-5482	pyruvate fermentation to acetate II
THIMO_RS09250	PWY-5485	pyruvate fermentation to acetate IV
THIMO_RS09250	PWY-5497	purine nucleobases degradation II (anaerobic)
THIMO_RS09310	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
THIMO_RS09320	PWY-5278	sulfite oxidation III
THIMO_RS09320	PWY-5340	sulfate activation for sulfonation
THIMO_RS09320	PWY-6683	sulfate reduction III (assimilatory)
THIMO_RS09320	PWY-6932	selenate reduction
THIMO_RS09600	PWY-5316	nicotine biosynthesis
THIMO_RS09600	PWY-7342	superpathway of nicotine biosynthesis
THIMO_RS09635	PWY-5941	glycogen degradation II (eukaryotic)
THIMO_RS09635	PWY-6724	starch degradation II
THIMO_RS09635	PWY-6737	starch degradation V
THIMO_RS09635	PWY-7238	sucrose biosynthesis II
THIMO_RS09770	PWY-6891	thiazole biosynthesis II (Bacillus)
THIMO_RS09770	PWY-6892	thiazole biosynthesis I (E. coli)
THIMO_RS09920	PWY-6902	chitin degradation II
THIMO_RS09950	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THIMO_RS09960	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THIMO_RS09965	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS10045	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
THIMO_RS10045	PWY-5368	dimorphecolate biosynthesis
THIMO_RS10045	PWY-5995	linoleate biosynthesis I (plants)
THIMO_RS10045	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
THIMO_RS10045	PWY-6803	phosphatidylcholine acyl editing
THIMO_RS10045	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
THIMO_RS10045	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
THIMO_RS10045	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
THIMO_RS10045	PWY-7470	phosphatidylcholine biosynthesis VII
THIMO_RS10045	PWY-7618	ricinoleate biosynthesis
THIMO_RS10060	PWY-1001	cellulose biosynthesis
THIMO_RS10060	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THIMO_RS10060	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THIMO_RS10060	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THIMO_RS10060	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THIMO_RS10110	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS10130	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THIMO_RS10130	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THIMO_RS10130	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
THIMO_RS10200	PWY-6829	tRNA methylation (yeast)
THIMO_RS10200	PWY-7285	methylwyosine biosynthesis
THIMO_RS10200	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
THIMO_RS10360	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THIMO_RS10360	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THIMO_RS10360	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THIMO_RS10360	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THIMO_RS10360	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS10360	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS10360	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THIMO_RS10360	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THIMO_RS10410	PWY-1042	glycolysis IV (plant cytosol)
THIMO_RS10410	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THIMO_RS10410	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS10410	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THIMO_RS10410	PWY-7385	1,3-propanediol biosynthesis (engineered)
THIMO_RS10415	PWY-1042	glycolysis IV (plant cytosol)
THIMO_RS10415	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THIMO_RS10415	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS10415	PWY-5723	Rubisco shunt
THIMO_RS10415	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THIMO_RS10415	PWY-6886	1-butanol autotrophic biosynthesis
THIMO_RS10415	PWY-6901	superpathway of glucose and xylose degradation
THIMO_RS10415	PWY-7003	glycerol degradation to butanol
THIMO_RS10415	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THIMO_RS10415	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THIMO_RS10420	PWY-1042	glycolysis IV (plant cytosol)
THIMO_RS10420	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS10420	PWY-6886	1-butanol autotrophic biosynthesis
THIMO_RS10420	PWY-6901	superpathway of glucose and xylose degradation
THIMO_RS10420	PWY-7003	glycerol degradation to butanol
THIMO_RS10425	PWY-1042	glycolysis IV (plant cytosol)
THIMO_RS10425	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS10425	PWY-6901	superpathway of glucose and xylose degradation
THIMO_RS10425	PWY-7003	glycerol degradation to butanol
THIMO_RS10430	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THIMO_RS10430	PWY-5723	Rubisco shunt
THIMO_RS10430	PWY-6891	thiazole biosynthesis II (Bacillus)
THIMO_RS10430	PWY-6892	thiazole biosynthesis I (E. coli)
THIMO_RS10430	PWY-6901	superpathway of glucose and xylose degradation
THIMO_RS10430	PWY-7560	methylerythritol phosphate pathway II
THIMO_RS10440	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THIMO_RS10440	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
THIMO_RS10445	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THIMO_RS10450	PWY-2201	folate transformations I
THIMO_RS10450	PWY-3841	folate transformations II
THIMO_RS10455	PWY-6840	homoglutathione biosynthesis
THIMO_RS10455	PWY-7255	ergothioneine biosynthesis I (bacteria)
THIMO_RS10495	PWY-5381	pyridine nucleotide cycling (plants)
THIMO_RS10495	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THIMO_RS10510	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THIMO_RS10625	PWY-6832	2-aminoethylphosphonate degradation II
THIMO_RS10635	PWY-5669	phosphatidylethanolamine biosynthesis I
THIMO_RS10660	PWY-5381	pyridine nucleotide cycling (plants)
THIMO_RS10660	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THIMO_RS10660	PWY-6596	adenosine nucleotides degradation I
THIMO_RS10660	PWY-6606	guanosine nucleotides degradation II
THIMO_RS10660	PWY-6607	guanosine nucleotides degradation I
THIMO_RS10660	PWY-6608	guanosine nucleotides degradation III
THIMO_RS10660	PWY-7185	UTP and CTP dephosphorylation I
THIMO_RS10705	PWY-5316	nicotine biosynthesis
THIMO_RS10705	PWY-7342	superpathway of nicotine biosynthesis
THIMO_RS10715	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
THIMO_RS10825	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS10830	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS10915	PWY-5686	UMP biosynthesis
THIMO_RS10920	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THIMO_RS10920	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THIMO_RS10925	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
THIMO_RS10925	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
THIMO_RS10925	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
THIMO_RS10925	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
THIMO_RS10925	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
THIMO_RS10925	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
THIMO_RS10925	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
THIMO_RS10925	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
THIMO_RS10925	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
THIMO_RS10925	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
THIMO_RS10940	PWY-3781	aerobic respiration I (cytochrome c)
THIMO_RS10940	PWY-6692	Fe(II) oxidation
THIMO_RS10940	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
THIMO_RS10940	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THIMO_RS10995	PWY-5676	acetyl-CoA fermentation to butanoate II
THIMO_RS10995	PWY-5741	ethylmalonyl-CoA pathway
THIMO_RS10995	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
THIMO_RS11130	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
THIMO_RS11195	PWY-2661	trehalose biosynthesis V
THIMO_RS11195	PWY-6902	chitin degradation II
THIMO_RS11225	PWY-5669	phosphatidylethanolamine biosynthesis I
THIMO_RS11240	PWY-5382	hydrogen oxidation II (aerobic, NAD)
THIMO_RS11240	PWY-6758	hydrogen production II
THIMO_RS11335	PWY-5101	L-isoleucine biosynthesis II
THIMO_RS11335	PWY-5103	L-isoleucine biosynthesis III
THIMO_RS11335	PWY-5104	L-isoleucine biosynthesis IV
THIMO_RS11335	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THIMO_RS11355	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THIMO_RS11355	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THIMO_RS11355	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS11355	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
THIMO_RS11355	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THIMO_RS11355	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THIMO_RS11365	PWY-6543	4-aminobenzoate biosynthesis
THIMO_RS11380	PWY-5367	petroselinate biosynthesis
THIMO_RS11380	PWY-5515	L-arabinose degradation II
THIMO_RS11380	PWY-5525	D-glucuronate degradation I
THIMO_RS11380	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THIMO_RS11380	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THIMO_RS11380	PWY-5989	stearate biosynthesis II (bacteria and plants)
THIMO_RS11380	PWY-5994	palmitate biosynthesis I (animals and fungi)
THIMO_RS11380	PWY-6113	superpathway of mycolate biosynthesis
THIMO_RS11380	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THIMO_RS11380	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THIMO_RS11380	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THIMO_RS11380	PWY-7663	gondoate biosynthesis (anaerobic)
THIMO_RS11380	PWY-7664	oleate biosynthesis IV (anaerobic)
THIMO_RS11380	PWYG-321	mycolate biosynthesis
THIMO_RS11385	PWY-4381	fatty acid biosynthesis initiation I
THIMO_RS11385	PWY-6799	fatty acid biosynthesis (plant mitochondria)
THIMO_RS11385	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THIMO_RS11390	PWY-4381	fatty acid biosynthesis initiation I
THIMO_RS11410	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS11445	PWY-2781	<i>cis</i>-zeatin biosynthesis
THIMO_RS11550	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS11550	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS11590	PWY-6823	molybdenum cofactor biosynthesis
THIMO_RS11590	PWY-6891	thiazole biosynthesis II (Bacillus)
THIMO_RS11590	PWY-6892	thiazole biosynthesis I (E. coli)
THIMO_RS11590	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
THIMO_RS11605	PWY-2941	L-lysine biosynthesis II
THIMO_RS11605	PWY-2942	L-lysine biosynthesis III
THIMO_RS11605	PWY-5097	L-lysine biosynthesis VI
THIMO_RS11605	PWY-6559	spermidine biosynthesis II
THIMO_RS11605	PWY-6562	norspermidine biosynthesis
THIMO_RS11605	PWY-7153	grixazone biosynthesis
THIMO_RS11635	PWY-5692	allantoin degradation to glyoxylate II
THIMO_RS11635	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
THIMO_RS11725	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THIMO_RS11725	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THIMO_RS11725	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THIMO_RS12130	PWY-2941	L-lysine biosynthesis II
THIMO_RS12130	PWY-2942	L-lysine biosynthesis III
THIMO_RS12130	PWY-5097	L-lysine biosynthesis VI
THIMO_RS12155	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THIMO_RS12155	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THIMO_RS12155	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
THIMO_RS12190	PWY-6749	CMP-legionaminate biosynthesis I
THIMO_RS12195	PWY-6614	tetrahydrofolate biosynthesis
THIMO_RS12240	PWY-5686	UMP biosynthesis
THIMO_RS12245	PWY-5686	UMP biosynthesis
THIMO_RS12275	PWY-40	putrescine biosynthesis I
THIMO_RS12275	PWY-43	putrescine biosynthesis II
THIMO_RS12275	PWY-6305	putrescine biosynthesis IV
THIMO_RS12275	PWY-6834	spermidine biosynthesis III
THIMO_RS12340	PWY-4041	&gamma;-glutamyl cycle
THIMO_RS12340	PWY-5826	hypoglycin biosynthesis
THIMO_RS12425	PWY-6825	phosphatidylcholine biosynthesis V
THIMO_RS12515	PWY-5269	cardiolipin biosynthesis II
THIMO_RS12515	PWY-5668	cardiolipin biosynthesis I
THIMO_RS12565	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS12570	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS12620	PWY-5194	siroheme biosynthesis
THIMO_RS12620	PWY-5441	S-methyl-L-methionine cycle
THIMO_RS12620	PWY-702	L-methionine biosynthesis II
THIMO_RS12620	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
THIMO_RS12625	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
THIMO_RS12635	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THIMO_RS12635	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THIMO_RS12635	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THIMO_RS12635	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
THIMO_RS12650	PWY-2161	folate polyglutamylation
THIMO_RS12655	PWY-4381	fatty acid biosynthesis initiation I
THIMO_RS12655	PWY-5743	3-hydroxypropanoate cycle
THIMO_RS12655	PWY-5744	glyoxylate assimilation
THIMO_RS12655	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THIMO_RS12655	PWY-6679	jadomycin biosynthesis
THIMO_RS12655	PWY-6722	candicidin biosynthesis
THIMO_RS12655	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THIMO_RS12685	PWY-2941	L-lysine biosynthesis II
THIMO_RS12685	PWY-2942	L-lysine biosynthesis III
THIMO_RS12685	PWY-5097	L-lysine biosynthesis VI
THIMO_RS12685	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THIMO_RS12685	PWY-6559	spermidine biosynthesis II
THIMO_RS12685	PWY-6562	norspermidine biosynthesis
THIMO_RS12685	PWY-7153	grixazone biosynthesis
THIMO_RS12685	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THIMO_RS12690	PWY-7396	butanol and isobutanol biosynthesis (engineered)
THIMO_RS12770	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THIMO_RS12770	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THIMO_RS12770	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THIMO_RS12785	PWY-5747	2-methylcitrate cycle II
THIMO_RS12795	PWY-6672	<i>cis</i>-genanyl-CoA degradation
THIMO_RS12795	PWY-7118	chitin degradation to ethanol
THIMO_RS12935	PWY-6823	molybdenum cofactor biosynthesis
THIMO_RS12935	PWY-6891	thiazole biosynthesis II (Bacillus)
THIMO_RS12935	PWY-6892	thiazole biosynthesis I (E. coli)
THIMO_RS12935	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
THIMO_RS13060	PWY-5344	L-homocysteine biosynthesis
THIMO_RS13060	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
THIMO_RS13110	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THIMO_RS13110	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THIMO_RS13145	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THIMO_RS13145	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THIMO_RS13205	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS13205	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS13220	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THIMO_RS13220	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
THIMO_RS13225	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THIMO_RS13225	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THIMO_RS13270	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
THIMO_RS13305	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THIMO_RS13370	PWY-5532	adenosine nucleotides degradation IV
THIMO_RS13370	PWY-5723	Rubisco shunt
THIMO_RS13485	PWY-5392	reductive TCA cycle II
THIMO_RS13485	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THIMO_RS13485	PWY-5690	TCA cycle II (plants and fungi)
THIMO_RS13485	PWY-5913	TCA cycle VI (obligate autotrophs)
THIMO_RS13485	PWY-6728	methylaspartate cycle
THIMO_RS13485	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THIMO_RS13485	PWY-7254	TCA cycle VII (acetate-producers)
THIMO_RS13485	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THIMO_RS13725	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
THIMO_RS13775	PWY-1042	glycolysis IV (plant cytosol)
THIMO_RS13775	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THIMO_RS13775	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS13775	PWY-5723	Rubisco shunt
THIMO_RS13775	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THIMO_RS13775	PWY-6886	1-butanol autotrophic biosynthesis
THIMO_RS13775	PWY-6901	superpathway of glucose and xylose degradation
THIMO_RS13775	PWY-7003	glycerol degradation to butanol
THIMO_RS13775	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THIMO_RS13775	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THIMO_RS13830	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
THIMO_RS13830	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
THIMO_RS14015	PWY-5532	adenosine nucleotides degradation IV
THIMO_RS14015	PWY-5723	Rubisco shunt
THIMO_RS14020	PWY-5532	adenosine nucleotides degradation IV
THIMO_RS14020	PWY-5723	Rubisco shunt
THIMO_RS14060	PWY-7158	L-phenylalanine degradation V
THIMO_RS14105	PWY-2941	L-lysine biosynthesis II
THIMO_RS14105	PWY-2942	L-lysine biosynthesis III
THIMO_RS14105	PWY-5097	L-lysine biosynthesis VI
THIMO_RS14135	PWY-6703	preQ<sub>0</sub> biosynthesis
THIMO_RS14255	PWY-101	photosynthesis light reactions
THIMO_RS14260	PWY-101	photosynthesis light reactions
THIMO_RS14285	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
THIMO_RS14285	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS14285	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS14290	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
THIMO_RS14290	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS14290	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS14295	PWY-5526	bacteriochlorophyll <i>a</i> biosynthesis
THIMO_RS14335	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS14335	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS14340	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS14340	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS14345	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS14345	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS14375	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS14375	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS14380	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS14380	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS14385	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS14385	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS14390	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS14390	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS14395	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS14395	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS14405	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
THIMO_RS14410	PWY-2201	folate transformations I
THIMO_RS14410	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THIMO_RS14415	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THIMO_RS14420	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THIMO_RS14420	PWY-6578	8-amino-7-oxononanoate biosynthesis III
THIMO_RS14420	PWY-7147	8-amino-7-oxononanoate biosynthesis II
THIMO_RS14425	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
THIMO_RS14450	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THIMO_RS14475	PWY-6749	CMP-legionaminate biosynthesis I
THIMO_RS14490	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THIMO_RS14530	PWY-3221	dTDP-L-rhamnose biosynthesis II
THIMO_RS14530	PWY-6808	dTDP-D-forosamine biosynthesis
THIMO_RS14530	PWY-6942	dTDP-D-desosamine biosynthesis
THIMO_RS14530	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
THIMO_RS14530	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
THIMO_RS14530	PWY-6974	dTDP-L-olivose biosynthesis
THIMO_RS14530	PWY-6976	dTDP-L-mycarose biosynthesis
THIMO_RS14530	PWY-7104	dTDP-L-megosamine biosynthesis
THIMO_RS14530	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
THIMO_RS14530	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
THIMO_RS14530	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
THIMO_RS14530	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
THIMO_RS14530	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
THIMO_RS14530	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
THIMO_RS14530	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
THIMO_RS14530	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
THIMO_RS14530	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
THIMO_RS14530	PWY-7688	THIMO_RS14530
THIMO_RS14535	PWY-3221	dTDP-L-rhamnose biosynthesis II
THIMO_RS14535	PWY-6808	dTDP-D-forosamine biosynthesis
THIMO_RS14535	PWY-6942	dTDP-D-desosamine biosynthesis
THIMO_RS14535	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
THIMO_RS14535	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
THIMO_RS14535	PWY-6974	dTDP-L-olivose biosynthesis
THIMO_RS14535	PWY-6976	dTDP-L-mycarose biosynthesis
THIMO_RS14535	PWY-7104	dTDP-L-megosamine biosynthesis
THIMO_RS14535	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
THIMO_RS14535	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
THIMO_RS14535	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
THIMO_RS14535	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
THIMO_RS14535	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
THIMO_RS14535	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
THIMO_RS14535	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
THIMO_RS14535	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
THIMO_RS14535	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
THIMO_RS14535	PWY-7688	THIMO_RS14535
THIMO_RS14540	PWY-6655	xanthan biosynthesis
THIMO_RS14540	PWY-6658	acetan biosynthesis
THIMO_RS14710	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THIMO_RS14710	PWY-6164	3-dehydroquinate biosynthesis I
THIMO_RS14710	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THIMO_RS14745	PWY-2201	folate transformations I
THIMO_RS14745	PWY-5497	purine nucleobases degradation II (anaerobic)
THIMO_RS14765	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THIMO_RS14765	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THIMO_RS14770	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THIMO_RS14770	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THIMO_RS14775	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THIMO_RS14775	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THIMO_RS14780	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THIMO_RS14780	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THIMO_RS14780	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THIMO_RS14780	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THIMO_RS14790	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THIMO_RS14790	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THIMO_RS14795	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THIMO_RS14795	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THIMO_RS14795	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THIMO_RS14800	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THIMO_RS14800	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THIMO_RS14820	PWY-2201	folate transformations I
THIMO_RS14830	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
THIMO_RS14830	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
THIMO_RS14830	PWY-6269	adenosylcobalamin salvage from cobinamide II
THIMO_RS14875	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THIMO_RS14885	PWY-7560	methylerythritol phosphate pathway II
THIMO_RS14905	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
THIMO_RS14910	PWY-3821	galactose degradation III
THIMO_RS14910	PWY-6317	galactose degradation I (Leloir pathway)
THIMO_RS14910	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
THIMO_RS14910	PWY-6527	stachyose degradation
THIMO_RS14910	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
THIMO_RS14910	PWY-7344	UDP-D-galactose biosynthesis
THIMO_RS15380	PWY-3081	L-lysine biosynthesis V
THIMO_RS15380	PWY-6871	3-methylbutanol biosynthesis
THIMO_RS15380	PWY-7710	THIMO_RS15380
THIMO_RS15455	PWY-6823	molybdenum cofactor biosynthesis
THIMO_RS15510	PWY-1281	sulfoacetaldehyde degradation I
THIMO_RS15510	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THIMO_RS15510	PWY-5482	pyruvate fermentation to acetate II
THIMO_RS15510	PWY-5485	pyruvate fermentation to acetate IV
THIMO_RS15510	PWY-5497	purine nucleobases degradation II (anaerobic)
THIMO_RS15510	PWY-6637	sulfolactate degradation II
THIMO_RS15510	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THIMO_RS15515	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
THIMO_RS15515	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
THIMO_RS15515	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
THIMO_RS15515	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
THIMO_RS15515	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
THIMO_RS15515	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
THIMO_RS15515	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
THIMO_RS15515	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
THIMO_RS15515	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
THIMO_RS15515	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
THIMO_RS15580	PWY-2941	L-lysine biosynthesis II
THIMO_RS15580	PWY-5097	L-lysine biosynthesis VI
THIMO_RS15630	PWY-4981	L-proline biosynthesis II (from arginine)
THIMO_RS15630	PWY-4984	urea cycle
THIMO_RS15630	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THIMO_RS15645	PWY-5674	nitrate reduction IV (dissimilatory)
THIMO_RS15770	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
THIMO_RS15770	PWY-5901	2,3-dihydroxybenzoate biosynthesis
THIMO_RS15770	PWY-6406	salicylate biosynthesis I
THIMO_RS15775	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
THIMO_RS15780	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
THIMO_RS15785	PWY-5839	menaquinol-7 biosynthesis
THIMO_RS15785	PWY-5851	demethylmenaquinol-9 biosynthesis
THIMO_RS15785	PWY-5852	demethylmenaquinol-8 biosynthesis I
THIMO_RS15785	PWY-5853	demethylmenaquinol-6 biosynthesis I
THIMO_RS15785	PWY-5890	menaquinol-10 biosynthesis
THIMO_RS15785	PWY-5891	menaquinol-11 biosynthesis
THIMO_RS15785	PWY-5892	menaquinol-12 biosynthesis
THIMO_RS15785	PWY-5895	menaquinol-13 biosynthesis
THIMO_RS15790	PWY-1042	glycolysis IV (plant cytosol)
THIMO_RS15790	PWY-1622	formaldehyde assimilation I (serine pathway)
THIMO_RS15790	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THIMO_RS15790	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS15790	PWY-5723	Rubisco shunt
THIMO_RS15790	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
THIMO_RS15790	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THIMO_RS15790	PWY-6886	1-butanol autotrophic biosynthesis
THIMO_RS15790	PWY-6901	superpathway of glucose and xylose degradation
THIMO_RS15790	PWY-7003	glycerol degradation to butanol
THIMO_RS15790	PWY-7124	ethylene biosynthesis V (engineered)
THIMO_RS15790	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THIMO_RS15800	PWY-5941	glycogen degradation II (eukaryotic)
THIMO_RS15800	PWY-6724	starch degradation II
THIMO_RS15800	PWY-6737	starch degradation V
THIMO_RS15800	PWY-7238	sucrose biosynthesis II
THIMO_RS15805	PWY-622	starch biosynthesis
THIMO_RS15810	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THIMO_RS15810	PWY-622	starch biosynthesis
THIMO_RS15830	PWY-6823	molybdenum cofactor biosynthesis
THIMO_RS15835	PWY-5958	acridone alkaloid biosynthesis
THIMO_RS15835	PWY-6543	4-aminobenzoate biosynthesis
THIMO_RS15835	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THIMO_RS15835	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THIMO_RS15840	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THIMO_RS15840	PWY-6549	L-glutamine biosynthesis III
THIMO_RS15840	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THIMO_RS15840	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THIMO_RS15890	PWY-6854	ethylene biosynthesis III (microbes)
THIMO_RS15900	PWY-5532	adenosine nucleotides degradation IV
THIMO_RS15900	PWY-5723	Rubisco shunt
THIMO_RS16005	PWY-6871	3-methylbutanol biosynthesis
THIMO_RS16055	PWY-622	starch biosynthesis
THIMO_RS16060	PWY-1042	glycolysis IV (plant cytosol)
THIMO_RS16060	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THIMO_RS16060	PWY-5484	glycolysis II (from fructose 6-phosphate)
THIMO_RS16060	PWY-5723	Rubisco shunt
THIMO_RS16060	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THIMO_RS16060	PWY-6886	1-butanol autotrophic biosynthesis
THIMO_RS16060	PWY-6901	superpathway of glucose and xylose degradation
THIMO_RS16060	PWY-7003	glycerol degradation to butanol
THIMO_RS16060	PWY-7124	ethylene biosynthesis V (engineered)
THIMO_RS16060	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THIMO_RS16065	PWY-3841	folate transformations II
THIMO_RS16065	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THIMO_RS16065	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS16065	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THIMO_RS16065	PWY-7199	pyrimidine deoxyribonucleosides salvage
THIMO_RS16065	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THIMO_RS16095	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THIMO_RS16195	PWY-5443	aminopropanol phosphate biosynthesis I
THIMO_RS16205	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
THIMO_RS16205	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
THIMO_RS16205	PWY-6269	adenosylcobalamin salvage from cobinamide II
THIMO_RS16275	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
THIMO_RS16275	PWY-7494	choline degradation IV
THIMO_RS16350	PWY-622	starch biosynthesis
THIMO_RS16355	PWY-5941	glycogen degradation II (eukaryotic)
THIMO_RS16355	PWY-6724	starch degradation II
THIMO_RS16355	PWY-6737	starch degradation V
THIMO_RS16355	PWY-7238	sucrose biosynthesis II
THIMO_RS16365	PWY-2941	L-lysine biosynthesis II
THIMO_RS16365	PWY-2942	L-lysine biosynthesis III
THIMO_RS16365	PWY-5097	L-lysine biosynthesis VI
THIMO_RS16490	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS16490	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS16490	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS16495	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS16495	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS16495	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THIMO_RS16700	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THIMO_RS16700	PWY-6148	tetrahydromethanopterin biosynthesis
THIMO_RS16700	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THIMO_RS16700	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THIMO_RS16705	PWY-6654	phosphopantothenate biosynthesis III
THIMO_RS16715	PWY-5155	&beta;-alanine biosynthesis III
THIMO_RS16720	PWY-622	starch biosynthesis
THIMO_RS16725	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THIMO_RS16730	PWY-3801	sucrose degradation II (sucrose synthase)
THIMO_RS16730	PWY-5054	sorbitol biosynthesis I
THIMO_RS16730	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
THIMO_RS16730	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THIMO_RS16730	PWY-5659	GDP-mannose biosynthesis
THIMO_RS16730	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THIMO_RS16730	PWY-621	sucrose degradation III (sucrose invertase)
THIMO_RS16730	PWY-622	starch biosynthesis
THIMO_RS16730	PWY-6981	chitin biosynthesis
THIMO_RS16730	PWY-6992	1,5-anhydrofructose degradation
THIMO_RS16730	PWY-7238	sucrose biosynthesis II
THIMO_RS16730	PWY-7347	sucrose biosynthesis III
THIMO_RS16730	PWY-7385	1,3-propanediol biosynthesis (engineered)
THIMO_RS16775	PWY-4041	&gamma;-glutamyl cycle
THIMO_RS16840	PWY-5506	methanol oxidation to formaldehyde IV
THIMO_RS16865	PWY-5194	siroheme biosynthesis
THIMO_RS16865	PWY-5441	S-methyl-L-methionine cycle
THIMO_RS16865	PWY-702	L-methionine biosynthesis II
THIMO_RS16865	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
THIMO_RS16875	PWY-2201	folate transformations I
THIMO_RS16875	PWY-3841	folate transformations II
THIMO_RS16875	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
THIMO_RS16935	PWY-5669	phosphatidylethanolamine biosynthesis I
THIMO_RS17080	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THIMO_RS17080	PWY-6596	adenosine nucleotides degradation I
THIMO_RS17080	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS17085	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THIMO_RS17105	PWY-4261	glycerol degradation I
THIMO_RS17110	PWY-6700	queuosine biosynthesis
THIMO_RS17125	PWY-7181	pyrimidine deoxyribonucleosides degradation
THIMO_RS17160	PWY-5101	L-isoleucine biosynthesis II
THIMO_RS17160	PWY-5103	L-isoleucine biosynthesis III
THIMO_RS17160	PWY-5104	L-isoleucine biosynthesis IV
THIMO_RS17160	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THIMO_RS17160	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THIMO_RS17160	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THIMO_RS17160	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THIMO_RS17180	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THIMO_RS17180	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THIMO_RS17215	PWY-6825	phosphatidylcholine biosynthesis V
THIMO_RS17240	PWY-6825	phosphatidylcholine biosynthesis V
THIMO_RS17340	PWY-5958	acridone alkaloid biosynthesis
THIMO_RS17340	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THIMO_RS17340	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THIMO_RS17345	PWY-181	photorespiration
THIMO_RS17350	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THIMO_RS17350	PWY-5723	Rubisco shunt
THIMO_RS17415	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THIMO_RS17420	PWY-6502	oxidized GTP and dGTP detoxification
THIMO_RS17420	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THIMO_RS17420	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THIMO_RS17420	PWY-6897	thiamin salvage II
THIMO_RS17420	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
THIMO_RS17420	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
THIMO_RS17420	PWY-7356	thiamin salvage IV (yeast)
THIMO_RS17420	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THIMO_RS17455	PWY-5667	CDP-diacylglycerol biosynthesis I
THIMO_RS17455	PWY-5981	CDP-diacylglycerol biosynthesis III
THIMO_RS17460	PWY-6004	glycine betaine biosynthesis V (from glycine)
THIMO_RS17495	PWY-381	nitrate reduction II (assimilatory)
THIMO_RS17495	PWY-5675	nitrate reduction V (assimilatory)
THIMO_RS17495	PWY-6549	L-glutamine biosynthesis III
THIMO_RS17495	PWY-6963	ammonia assimilation cycle I
THIMO_RS17495	PWY-6964	ammonia assimilation cycle II
THIMO_RS18400	PWY-6825	phosphatidylcholine biosynthesis V
