locus-tag class description COW1_RS00005 PF05362 Lon protease (S16) C-terminal proteolytic domain COW1_RS00005 PF00004 ATPase family associated with various cellular activities (AAA) COW1_RS00005 PF02190 ATP-dependent protease La (LON) substrate-binding domain COW1_RS00010 PF03453 MoeA N-terminal region (domain I and II) COW1_RS00010 PF03454 MoeA C-terminal region (domain IV) COW1_RS00010 PF00994 Probable molybdopterin binding domain COW1_RS00015 PF03205 Molybdopterin guanine dinucleotide synthesis protein B COW1_RS00020 PF12804 MobA-like NTP transferase domain COW1_RS00030 PF00313 'Cold-shock' DNA-binding domain COW1_RS00040 PF14535 AMP-binding enzyme C-terminal domain COW1_RS00040 PF00501 AMP-binding enzyme COW1_RS00045 PF02899 Phage integrase, N-terminal SAM-like domain COW1_RS00045 PF00589 Phage integrase family COW1_RS00050 PF13098 Thioredoxin-like domain COW1_RS00050 PF10411 Disulfide bond isomerase protein N-terminus COW1_RS00055 PF00085 Thioredoxin COW1_RS00060 PF00580 UvrD/REP helicase N-terminal domain COW1_RS00060 PF12705 PD-(D/E)XK nuclease superfamily COW1_RS00060 PF13361 UvrD-like helicase C-terminal domain COW1_RS00075 PF00037 4Fe-4S binding domain COW1_RS00075 PF11953 Domain of unknown function (DUF3470) COW1_RS00080 PF00563 EAL domain COW1_RS00080 PF01590 GAF domain COW1_RS00080 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS00080 PF00360 Phytochrome region COW1_RS00085 PF00072 Response regulator receiver domain COW1_RS00085 PF01339 CheB methylesterase COW1_RS00090 PF00072 Response regulator receiver domain COW1_RS00090 PF01584 CheW-like domain COW1_RS00090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS00090 PF01627 Hpt domain COW1_RS00100 PF01739 CheR methyltransferase, SAM binding domain COW1_RS00110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COW1_RS00115 PF05192 MutS domain III COW1_RS00115 PF01624 MutS domain I COW1_RS00115 PF00488 MutS domain V COW1_RS00115 PF05190 MutS family domain IV COW1_RS00115 PF05188 MutS domain II COW1_RS00155 PF01695 IstB-like ATP binding protein COW1_RS00165 PF00440 Bacterial regulatory proteins, tetR family COW1_RS00175 PF03109 ABC1 family COW1_RS00180 PF01734 Patatin-like phospholipase COW1_RS00195 PF00873 AcrB/AcrD/AcrF family COW1_RS00205 PF13533 Biotin-lipoyl like COW1_RS00210 PF00005 ABC transporter COW1_RS00215 PF00005 ABC transporter COW1_RS00235 PF07690 Major Facilitator Superfamily COW1_RS00240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COW1_RS00240 PF00529 HlyD membrane-fusion protein of T1SS COW1_RS00250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family COW1_RS00255 PF00043 Glutathione S-transferase, C-terminal domain COW1_RS00255 PF02798 Glutathione S-transferase, N-terminal domain COW1_RS00260 PF01638 HxlR-like helix-turn-helix COW1_RS00315 PF03852 DNA mismatch endonuclease Vsr COW1_RS00320 PF00145 C-5 cytosine-specific DNA methylase COW1_RS00340 PF12161 HsdM N-terminal domain COW1_RS00340 PF02384 N-6 DNA Methylase COW1_RS00360 PF06114 IrrE N-terminal-like domain COW1_RS00375 PF06122 Conjugative relaxosome accessory transposon protein COW1_RS00385 PF06986 Type-1V conjugative transfer system mating pair stabilisation COW1_RS00400 PF06834 TraU protein COW1_RS00460 PF00691 OmpA family COW1_RS00460 PF01389 OmpA-like transmembrane domain COW1_RS00465 PF01464 Transglycosylase SLT domain COW1_RS00475 PF00593 TonB dependent receptor COW1_RS00475 PF07715 TonB-dependent Receptor Plug Domain COW1_RS00490 PF12801 4Fe-4S binding domain COW1_RS00495 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component COW1_RS00500 PF01869 BadF/BadG/BcrA/BcrD ATPase family COW1_RS00515 PF01609 Transposase DDE domain COW1_RS00515 PF05598 Transposase domain (DUF772) COW1_RS00540 PF04002 RadC-like JAB domain COW1_RS00585 PF17762 HTH domain found in ParB protein COW1_RS00585 PF02195 ParB-like nuclease domain COW1_RS00590 PF01131 DNA topoisomerase COW1_RS00590 PF01751 Toprim domain COW1_RS00625 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain COW1_RS00700 PF02464 Competence-damaged protein COW1_RS00705 PF02834 LigT like Phosphoesterase COW1_RS00710 PF00154 recA bacterial DNA recombination protein COW1_RS00715 PF02631 RecX family COW1_RS00720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain COW1_RS00720 PF01411 tRNA synthetases class II (A) COW1_RS00720 PF02272 DHHA1 domain COW1_RS00725 PF13840 ACT domain COW1_RS00725 PF01842 ACT domain COW1_RS00725 PF00696 Amino acid kinase family COW1_RS00730 PF02599 Global regulator protein family COW1_RS00760 PF08479 POTRA domain, ShlB-type COW1_RS00760 PF17287 POTRA domain COW1_RS00760 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB COW1_RS00775 PF05860 haemagglutination activity domain COW1_RS00780 PF01618 MotA/TolQ/ExbB proton channel family COW1_RS00785 PF02472 Biopolymer transport protein ExbD/TolR COW1_RS00835 PF07669 Eco57I restriction-modification methylase COW1_RS00910 PF00239 Resolvase, N terminal domain COW1_RS00910 PF02796 Helix-turn-helix domain of resolvase COW1_RS00970 PF04851 Type III restriction enzyme, res subunit COW1_RS00970 PF00271 Helicase conserved C-terminal domain COW1_RS01005 PF02195 ParB-like nuclease domain COW1_RS01050 PF01343 Peptidase family S49 COW1_RS01175 PF03852 DNA mismatch endonuclease Vsr COW1_RS01200 PF00176 SNF2 family N-terminal domain COW1_RS01200 PF00271 Helicase conserved C-terminal domain COW1_RS01210 PF18339 RapA N-terminal Tudor like domain 1 COW1_RS01210 PF00176 SNF2 family N-terminal domain COW1_RS01210 PF00271 Helicase conserved C-terminal domain COW1_RS01210 PF18337 RapA N-terminal Tudor like domain COW1_RS01210 PF12137 RNA polymerase recycling family C-terminal COW1_RS01215 PF00145 C-5 cytosine-specific DNA methylase COW1_RS01235 PF13784 Fic/DOC family N-terminal COW1_RS01235 PF02661 Fic/DOC family COW1_RS01240 PF01555 DNA methylase COW1_RS01240 PF18273 Type III R-M EcoP15I C-terminal domain COW1_RS01255 PF00378 Enoyl-CoA hydratase/isomerase COW1_RS01260 PF00072 Response regulator receiver domain COW1_RS01260 PF01627 Hpt domain COW1_RS01260 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS01260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS01265 PF00072 Response regulator receiver domain COW1_RS01280 PF03150 Di-haem cytochrome c peroxidase COW1_RS01280 PF00034 Cytochrome c COW1_RS01290 PF00361 Proton-conducting membrane transporter COW1_RS01290 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus COW1_RS01295 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) COW1_RS01305 PF13439 Glycosyltransferase Family 4 COW1_RS01305 PF00534 Glycosyl transferases group 1 COW1_RS01315 PF03466 LysR substrate binding domain COW1_RS01315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COW1_RS01320 PF02525 Flavodoxin-like fold COW1_RS01325 PF02678 Pirin COW1_RS01325 PF05726 Pirin C-terminal cupin domain COW1_RS01335 PF02773 S-adenosylmethionine synthetase, C-terminal domain COW1_RS01335 PF02772 S-adenosylmethionine synthetase, central domain COW1_RS01335 PF00438 S-adenosylmethionine synthetase, N-terminal domain COW1_RS01340 PF08241 Methyltransferase domain COW1_RS01345 PF13649 Methyltransferase domain COW1_RS01360 PF12169 DNA polymerase III subunits gamma and tau domain III COW1_RS01360 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding COW1_RS01360 PF12170 DNA polymerase III tau subunit V interacting with alpha COW1_RS01365 PF02575 YbaB/EbfC DNA-binding family COW1_RS01370 PF13662 Toprim domain COW1_RS01370 PF02132 RecR protein COW1_RS01380 PF01230 HIT domain COW1_RS01385 PF03193 RsgA GTPase COW1_RS01390 PF01329 Pterin 4 alpha carbinolamine dehydratase COW1_RS01400 PF01435 Peptidase family M48 COW1_RS01405 PF00929 Exonuclease COW1_RS01410 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain COW1_RS01410 PF00391 PEP-utilising enzyme, mobile domain COW1_RS01410 PF02896 PEP-utilising enzyme, TIM barrel domain COW1_RS01415 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase COW1_RS01415 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain COW1_RS01420 PF03618 Kinase/pyrophosphorylase COW1_RS01425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II COW1_RS01425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III COW1_RS01425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain COW1_RS01425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I COW1_RS01435 PF02082 Transcriptional regulator COW1_RS01445 PF00465 Iron-containing alcohol dehydrogenase COW1_RS01450 PF03992 Antibiotic biosynthesis monooxygenase COW1_RS01460 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS01460 PF03707 Bacterial signalling protein N terminal repeat COW1_RS01460 PF00563 EAL domain COW1_RS01465 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS01465 PF00563 EAL domain COW1_RS01465 PF03707 Bacterial signalling protein N terminal repeat COW1_RS01470 PF00929 Exonuclease COW1_RS01480 PF00474 Sodium:solute symporter family COW1_RS01515 PF00343 Carbohydrate phosphorylase COW1_RS01520 PF01230 HIT domain COW1_RS01535 PF00497 Bacterial extracellular solute-binding proteins, family 3 COW1_RS01535 PF01464 Transglycosylase SLT domain COW1_RS01545 PF01799 [2Fe-2S] binding domain COW1_RS01545 PF00111 2Fe-2S iron-sulfur cluster binding domain COW1_RS01555 PF13478 XdhC Rossmann domain COW1_RS01555 PF02625 XdhC and CoxI family COW1_RS01560 PF12804 MobA-like NTP transferase domain COW1_RS01570 PF01464 Transglycosylase SLT domain COW1_RS01570 PF01476 LysM domain COW1_RS01580 PF00075 RNase H COW1_RS01585 PF00929 Exonuclease COW1_RS01590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain COW1_RS01590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain COW1_RS01590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain COW1_RS01595 PF01370 NAD dependent epimerase/dehydratase family COW1_RS01600 PF13545 Crp-like helix-turn-helix domain COW1_RS01600 PF00027 Cyclic nucleotide-binding domain COW1_RS01605 PF02397 Bacterial sugar transferase COW1_RS01615 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS01615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS01620 PF00158 Sigma-54 interaction domain COW1_RS01620 PF00072 Response regulator receiver domain COW1_RS01620 PF02954 Bacterial regulatory protein, Fis family COW1_RS01635 PF03551 Transcriptional regulator PadR-like family COW1_RS01635 PF13847 Methyltransferase domain COW1_RS01645 PF00899 ThiF family COW1_RS01655 PF02563 Polysaccharide biosynthesis/export protein COW1_RS01655 PF10531 SLBB domain COW1_RS01665 PF13614 AAA domain COW1_RS01675 PF01471 Putative peptidoglycan binding domain COW1_RS01675 PF13401 AAA domain COW1_RS01680 PF02350 UDP-N-acetylglucosamine 2-epimerase COW1_RS01685 PF01522 Polysaccharide deacetylase COW1_RS01705 PF00534 Glycosyl transferases group 1 COW1_RS01705 PF13439 Glycosyltransferase Family 4 COW1_RS01710 PF00733 Asparagine synthase COW1_RS01710 PF13537 Glutamine amidotransferase domain COW1_RS01715 PF00534 Glycosyl transferases group 1 COW1_RS01720 PF13439 Glycosyltransferase Family 4 COW1_RS01720 PF00534 Glycosyl transferases group 1 COW1_RS01755 PF00534 Glycosyl transferases group 1 COW1_RS01755 PF13439 Glycosyltransferase Family 4 COW1_RS01765 PF02657 Fe-S metabolism associated domain COW1_RS01770 PF01521 Iron-sulphur cluster biosynthesis COW1_RS01775 PF01883 Iron-sulfur cluster assembly protein COW1_RS01780 PF01458 Uncharacterized protein family (UPF0051) COW1_RS01785 PF00005 ABC transporter COW1_RS01790 PF01458 Uncharacterized protein family (UPF0051) COW1_RS01800 PF00884 Sulfatase COW1_RS01805 PF13181 Tetratricopeptide repeat COW1_RS01820 PF13180 PDZ domain COW1_RS01835 PF07475 HPr Serine kinase C-terminal domain COW1_RS01835 PF02603 HPr Serine kinase N terminus COW1_RS01845 PF01370 NAD dependent epimerase/dehydratase family COW1_RS01860 PF01924 Hydrogenase formation hypA family COW1_RS01865 PF02492 CobW/HypB/UreG, nucleotide-binding domain COW1_RS01870 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA COW1_RS01875 PF01455 HupF/HypC family COW1_RS01890 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit COW1_RS01890 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal COW1_RS01905 PF00374 Nickel-dependent hydrogenase COW1_RS01915 PF17179 4Fe-4S dicluster domain COW1_RS01920 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B COW1_RS01920 PF00970 Oxidoreductase FAD-binding domain COW1_RS01920 PF00175 Oxidoreductase NAD-binding domain COW1_RS01935 PF01734 Patatin-like phospholipase COW1_RS01950 PF00501 AMP-binding enzyme COW1_RS01950 PF01370 NAD dependent epimerase/dehydratase family COW1_RS01950 PF00550 Phosphopantetheine attachment site COW1_RS01955 PF00586 AIR synthase related protein, N-terminal domain COW1_RS01955 PF02769 AIR synthase related protein, C-terminal domain COW1_RS01960 PF00708 Acylphosphatase COW1_RS01960 PF17788 HypF Kae1-like domain COW1_RS01960 PF07503 HypF finger COW1_RS01960 PF01300 Telomere recombination COW1_RS01970 PF00578 AhpC/TSA family COW1_RS02000 PF06167 Glucose-regulated metallo-peptidase M90 COW1_RS02010 PF02028 BCCT, betaine/carnitine/choline family transporter COW1_RS02030 PF00749 tRNA synthetases class I (E and Q), catalytic domain COW1_RS02040 PF01116 Fructose-bisphosphate aldolase class-II COW1_RS02045 PF14716 Helix-hairpin-helix domain COW1_RS02045 PF02811 PHP domain COW1_RS02045 PF14791 DNA polymerase beta thumb COW1_RS02050 PF01139 tRNA-splicing ligase RtcB COW1_RS02065 PF13654 AAA domain COW1_RS02065 PF05362 Lon protease (S16) C-terminal proteolytic domain COW1_RS02100 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system COW1_RS02105 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA COW1_RS02110 PF09957 Bacterial antitoxin of type II TA system, VapB COW1_RS02115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS02115 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS02115 PF08448 PAS fold COW1_RS02115 PF13188 PAS domain COW1_RS02115 PF00072 Response regulator receiver domain COW1_RS02120 PF00158 Sigma-54 interaction domain COW1_RS02120 PF02954 Bacterial regulatory protein, Fis family COW1_RS02120 PF00072 Response regulator receiver domain COW1_RS02125 PF00582 Universal stress protein family COW1_RS02140 PF05116 Sucrose-6F-phosphate phosphohydrolase COW1_RS02140 PF05166 YcgL domain COW1_RS02145 PF01026 TatD related DNase COW1_RS02155 PF00085 Thioredoxin COW1_RS02160 PF10609 NUBPL iron-transfer P-loop NTPase COW1_RS02175 PF03795 YCII-related domain COW1_RS02180 PF04279 Intracellular septation protein A COW1_RS02185 PF02811 PHP domain COW1_RS02190 PF01300 Telomere recombination COW1_RS02195 PF02163 Peptidase family M50 COW1_RS02200 PF00579 tRNA synthetases class I (W and Y) COW1_RS02205 PF02616 Segregation and condensation protein ScpA COW1_RS02210 PF04079 Segregation and condensation complex subunit ScpB COW1_RS02215 PF01479 S4 domain COW1_RS02215 PF00849 RNA pseudouridylate synthase COW1_RS02225 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS02225 PF08448 PAS fold COW1_RS02235 PF00106 short chain dehydrogenase COW1_RS02240 PF01593 Flavin containing amine oxidoreductase COW1_RS02255 PF02646 RmuC family COW1_RS02260 PF13419 Haloacid dehalogenase-like hydrolase COW1_RS02270 PF01979 Amidohydrolase family COW1_RS02275 PF05552 Conserved TM helix COW1_RS02275 PF00924 Mechanosensitive ion channel COW1_RS02280 PF00691 OmpA family COW1_RS02280 PF05736 OprF membrane domain COW1_RS02285 PF00072 Response regulator receiver domain COW1_RS02285 PF00486 Transcriptional regulatory protein, C terminal COW1_RS02290 PF01008 Initiation factor 2 subunit family COW1_RS02295 PF00521 DNA gyrase/topoisomerase IV, subunit A COW1_RS02295 PF03989 DNA gyrase C-terminal domain, beta-propeller COW1_RS02300 PF00266 Aminotransferase class-V COW1_RS02305 PF01842 ACT domain COW1_RS02305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COW1_RS02305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain COW1_RS02310 PF00800 Prephenate dehydratase COW1_RS02310 PF01817 Chorismate mutase type II COW1_RS02310 PF01842 ACT domain COW1_RS02315 PF00155 Aminotransferase class I and II COW1_RS02320 PF02153 Prephenate dehydrogenase COW1_RS02325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) COW1_RS02330 PF02224 Cytidylate kinase COW1_RS02335 PF00575 S1 RNA binding domain COW1_RS02340 PF00216 Bacterial DNA-binding protein COW1_RS02350 PF18073 Rubredoxin metal binding domain COW1_RS02355 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family COW1_RS02365 PF01050 Mannose-6-phosphate isomerase COW1_RS02365 PF00483 Nucleotidyl transferase COW1_RS02405 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family COW1_RS02410 PF02397 Bacterial sugar transferase COW1_RS02415 PF01209 ubiE/COQ5 methyltransferase family COW1_RS02435 PF00535 Glycosyl transferase family 2 COW1_RS02440 PF02719 Polysaccharide biosynthesis protein COW1_RS02445 PF00483 Nucleotidyl transferase COW1_RS02455 PF00155 Aminotransferase class I and II COW1_RS02460 PF02151 UvrB/uvrC motif COW1_RS02460 PF17757 UvrB interaction domain COW1_RS02460 PF00271 Helicase conserved C-terminal domain COW1_RS02460 PF12344 Ultra-violet resistance protein B COW1_RS02460 PF04851 Type III restriction enzyme, res subunit COW1_RS02470 PF00149 Calcineurin-like phosphoesterase COW1_RS02475 PF03150 Di-haem cytochrome c peroxidase COW1_RS02475 PF00034 Cytochrome c COW1_RS02485 PF03129 Anticodon binding domain COW1_RS02485 PF02824 TGS domain COW1_RS02485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain COW1_RS02485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) COW1_RS02490 PF00707 Translation initiation factor IF-3, C-terminal domain COW1_RS02490 PF05198 Translation initiation factor IF-3, N-terminal domain COW1_RS02495 PF01632 Ribosomal protein L35 COW1_RS02500 PF00453 Ribosomal protein L20 COW1_RS02505 PF01409 tRNA synthetases class II core domain (F) COW1_RS02505 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain COW1_RS02510 PF01588 Putative tRNA binding domain COW1_RS02510 PF03147 Ferredoxin-fold anticodon binding domain COW1_RS02510 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain COW1_RS02510 PF03484 tRNA synthetase B5 domain COW1_RS02510 PF03483 B3/4 domain COW1_RS02515 PF00216 Bacterial DNA-binding protein COW1_RS02520 PF13411 MerR HTH family regulatory protein COW1_RS02540 PF00793 DAHP synthetase I family COW1_RS02550 PF01336 OB-fold nucleic acid binding domain COW1_RS02550 PF00152 tRNA synthetases class II (D, K and N) COW1_RS02555 PF03707 Bacterial signalling protein N terminal repeat COW1_RS02555 PF00563 EAL domain COW1_RS02555 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS02570 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit COW1_RS02575 PF00890 FAD binding domain COW1_RS02575 PF02910 Fumarate reductase flavoprotein C-term COW1_RS02580 PF13085 2Fe-2S iron-sulfur cluster binding domain COW1_RS02585 PF03937 Flavinator of succinate dehydrogenase COW1_RS02590 PF01928 CYTH domain COW1_RS02605 PF00528 Binding-protein-dependent transport system inner membrane component COW1_RS02610 PF12911 N-terminal TM domain of oligopeptide transport permease C COW1_RS02610 PF00528 Binding-protein-dependent transport system inner membrane component COW1_RS02615 PF00933 Glycosyl hydrolase family 3 N terminal domain COW1_RS02620 PF00924 Mechanosensitive ion channel COW1_RS02625 PF01734 Patatin-like phospholipase COW1_RS02630 PF00156 Phosphoribosyl transferase domain COW1_RS02635 PF01048 Phosphorylase superfamily COW1_RS02640 PF00578 AhpC/TSA family COW1_RS02645 PF00795 Carbon-nitrogen hydrolase COW1_RS02645 PF00583 Acetyltransferase (GNAT) family COW1_RS02670 PF13333 Integrase core domain COW1_RS02670 PF00665 Integrase core domain COW1_RS02670 PF13276 HTH-like domain COW1_RS02690 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) COW1_RS02700 PF00270 DEAD/DEAH box helicase COW1_RS02700 PF02559 CarD-like/TRCF domain COW1_RS02700 PF17757 UvrB interaction domain COW1_RS02700 PF00271 Helicase conserved C-terminal domain COW1_RS02700 PF03461 TRCF domain COW1_RS02705 PF08003 Protein of unknown function (DUF1698) COW1_RS02715 PF13649 Methyltransferase domain COW1_RS02720 PF03692 Putative zinc- or iron-chelating domain COW1_RS02730 PF01903 CbiX COW1_RS02735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component COW1_RS02755 PF01546 Peptidase family M20/M25/M40 COW1_RS02755 PF07687 Peptidase dimerisation domain COW1_RS02760 PF03960 ArsC family COW1_RS02765 PF00563 EAL domain COW1_RS02765 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS02765 PF03707 Bacterial signalling protein N terminal repeat COW1_RS02770 PF01022 Bacterial regulatory protein, arsR family COW1_RS02775 PF01451 Low molecular weight phosphotyrosine protein phosphatase COW1_RS02780 PF01758 Sodium Bile acid symporter family COW1_RS02795 PF07995 Glucose / Sorbosone dehydrogenase COW1_RS02800 PF00027 Cyclic nucleotide-binding domain COW1_RS02800 PF07885 Ion channel COW1_RS02820 PF03334 Na+/H+ antiporter subunit COW1_RS02825 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) COW1_RS02835 PF00361 Proton-conducting membrane transporter COW1_RS02840 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L COW1_RS02845 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus COW1_RS02845 PF00361 Proton-conducting membrane transporter COW1_RS02845 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter COW1_RS02845 PF13244 Domain of unknown function (DUF4040) COW1_RS02850 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal COW1_RS02850 PF14602 Hexapeptide repeat of succinyl-transferase COW1_RS02850 PF00132 Bacterial transferase hexapeptide (six repeats) COW1_RS02855 PF00155 Aminotransferase class I and II COW1_RS02860 PF00892 EamA-like transporter family COW1_RS02875 PF04358 DsrC like protein COW1_RS02880 PF01966 HD domain COW1_RS02880 PF01842 ACT domain COW1_RS02880 PF01909 Nucleotidyltransferase domain COW1_RS02880 PF08335 GlnD PII-uridylyltransferase COW1_RS02885 PF00557 Metallopeptidase family M24 COW1_RS02890 PF00318 Ribosomal protein S2 COW1_RS02895 PF00889 Elongation factor TS COW1_RS02900 PF00696 Amino acid kinase family COW1_RS02905 PF01765 Ribosome recycling factor COW1_RS02910 PF01255 Putative undecaprenyl diphosphate synthase COW1_RS02920 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain COW1_RS02920 PF13288 DXP reductoisomerase C-terminal domain COW1_RS02920 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase COW1_RS02925 PF02163 Peptidase family M50 COW1_RS02925 PF17820 PDZ domain COW1_RS02925 PF13180 PDZ domain COW1_RS02930 PF07244 Surface antigen variable number repeat COW1_RS02930 PF01103 Surface antigen COW1_RS02940 PF00132 Bacterial transferase hexapeptide (six repeats) COW1_RS02940 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD COW1_RS02945 PF07977 FabA-like domain COW1_RS02950 PF00132 Bacterial transferase hexapeptide (six repeats) COW1_RS02950 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 COW1_RS02955 PF02684 Lipid-A-disaccharide synthetase COW1_RS02960 PF01351 Ribonuclease HII COW1_RS02965 PF02321 Outer membrane efflux protein COW1_RS02970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COW1_RS02975 PF02687 FtsX-like permease family COW1_RS02975 PF12704 MacB-like periplasmic core domain COW1_RS02975 PF00005 ABC transporter COW1_RS02980 PF12704 MacB-like periplasmic core domain COW1_RS02980 PF00005 ABC transporter COW1_RS02980 PF02687 FtsX-like permease family COW1_RS02985 PF14579 Helix-hairpin-helix motif COW1_RS02985 PF07733 Bacterial DNA polymerase III alpha NTPase domain COW1_RS02985 PF17657 Bacterial DNA polymerase III alpha subunit finger domain COW1_RS02985 PF01336 OB-fold nucleic acid binding domain COW1_RS02985 PF02811 PHP domain COW1_RS02990 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit COW1_RS03000 PF06418 CTP synthase N-terminus COW1_RS03000 PF00117 Glutamine amidotransferase class-I COW1_RS03005 PF00793 DAHP synthetase I family COW1_RS03010 PF03952 Enolase, N-terminal domain COW1_RS03010 PF00113 Enolase, C-terminal TIM barrel domain COW1_RS03015 PF04977 Septum formation initiator COW1_RS03020 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase COW1_RS03025 PF02542 YgbB family COW1_RS03030 PF02384 N-6 DNA Methylase COW1_RS03030 PF12161 HsdM N-terminal domain COW1_RS03035 PF01420 Type I restriction modification DNA specificity domain COW1_RS03045 PF00271 Helicase conserved C-terminal domain COW1_RS03045 PF04851 Type III restriction enzyme, res subunit COW1_RS03045 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) COW1_RS03045 PF08463 EcoEI R protein C-terminal COW1_RS03075 PF01142 tRNA pseudouridine synthase D (TruD) COW1_RS03080 PF01713 Smr domain COW1_RS03080 PF00488 MutS domain V COW1_RS03085 PF01975 Survival protein SurE COW1_RS03095 PF09335 SNARE associated Golgi protein COW1_RS03100 PF01551 Peptidase family M23 COW1_RS03100 PF01476 LysM domain COW1_RS03105 PF04545 Sigma-70, region 4 COW1_RS03105 PF04539 Sigma-70 region 3 COW1_RS03105 PF00140 Sigma-70 factor, region 1.2 COW1_RS03105 PF04542 Sigma-70 region 2 COW1_RS03115 PF00155 Aminotransferase class I and II COW1_RS03120 PF03447 Homoserine dehydrogenase, NAD binding domain COW1_RS03120 PF00742 Homoserine dehydrogenase COW1_RS03120 PF01842 ACT domain COW1_RS03125 PF00291 Pyridoxal-phosphate dependent enzyme COW1_RS03135 PF01368 DHH family COW1_RS03135 PF02272 DHHA1 domain COW1_RS03135 PF17768 RecJ OB domain COW1_RS03145 PF05951 Bacterial protein of unknown function (DUF882) COW1_RS03155 PF00999 Sodium/hydrogen exchanger family COW1_RS03155 PF03471 Transporter associated domain COW1_RS03155 PF02080 TrkA-C domain COW1_RS03180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COW1_RS03180 PF02874 ATP synthase alpha/beta family, beta-barrel domain COW1_RS03185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COW1_RS03185 PF02874 ATP synthase alpha/beta family, beta-barrel domain COW1_RS03185 PF16886 ATPsynthase alpha/beta subunit N-term extension COW1_RS03200 PF00137 ATP synthase subunit C COW1_RS03205 PF01496 V-type ATPase 116kDa subunit family COW1_RS03225 PF00582 Universal stress protein family COW1_RS03240 PF03448 MgtE intracellular N domain COW1_RS03240 PF01769 Divalent cation transporter COW1_RS03240 PF00571 CBS domain COW1_RS03270 PF10011 Predicted membrane protein (DUF2254) COW1_RS03280 PF01292 Prokaryotic cytochrome b561 COW1_RS03295 PF08240 Alcohol dehydrogenase GroES-like domain COW1_RS03295 PF00107 Zinc-binding dehydrogenase COW1_RS03300 PF00756 Putative esterase COW1_RS03315 PF08328 Adenylosuccinate lyase C-terminal COW1_RS03315 PF00206 Lyase COW1_RS03320 PF00694 Aconitase C-terminal domain COW1_RS03320 PF00330 Aconitase family (aconitate hydratase) COW1_RS03325 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS03330 PF04356 Protein of unknown function (DUF489) COW1_RS03340 PF13344 Haloacid dehalogenase-like hydrolase COW1_RS03340 PF00293 NUDIX domain COW1_RS03350 PF00180 Isocitrate/isopropylmalate dehydrogenase COW1_RS03355 PF00313 'Cold-shock' DNA-binding domain COW1_RS03360 PF02617 ATP-dependent Clp protease adaptor protein ClpS COW1_RS03365 PF10431 C-terminal, D2-small domain, of ClpB protein COW1_RS03365 PF02861 Clp amino terminal domain, pathogenicity island component COW1_RS03365 PF17871 AAA lid domain COW1_RS03365 PF07724 AAA domain (Cdc48 subfamily) COW1_RS03365 PF00004 ATPase family associated with various cellular activities (AAA) COW1_RS03370 PF01176 Translation initiation factor 1A / IF-1 COW1_RS03375 PF04376 Arginine-tRNA-protein transferase, N terminus COW1_RS03375 PF04377 Arginine-tRNA-protein transferase, C terminus COW1_RS03380 PF03588 Leucyl/phenylalanyl-tRNA protein transferase COW1_RS03390 PF07992 Pyridine nucleotide-disulphide oxidoreductase COW1_RS03395 PF01262 Alanine dehydrogenase/PNT, C-terminal domain COW1_RS03395 PF05222 Alanine dehydrogenase/PNT, N-terminal domain COW1_RS03400 PF17854 FtsK alpha domain COW1_RS03400 PF09397 Ftsk gamma domain COW1_RS03400 PF01580 FtsK/SpoIIIE family COW1_RS03400 PF13491 4TM region of DNA translocase FtsK/SpoIIIE COW1_RS03405 PF03548 Outer membrane lipoprotein carrier protein LolA COW1_RS03415 PF16193 AAA C-terminal domain COW1_RS03415 PF00004 ATPase family associated with various cellular activities (AAA) COW1_RS03415 PF12002 MgsA AAA+ ATPase C terminal COW1_RS03420 PF02537 CrcB-like protein, Camphor Resistance (CrcB) COW1_RS03430 PF02403 Seryl-tRNA synthetase N-terminal domain COW1_RS03430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) COW1_RS03440 PF07694 5TMR of 5TMR-LYT COW1_RS03440 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS03455 PF04358 DsrC like protein COW1_RS03460 PF17432 Domain of unknown function (DUF3458_C) ARM repeats COW1_RS03460 PF01433 Peptidase family M1 domain COW1_RS03460 PF11940 Domain of unknown function (DUF3458) Ig-like fold COW1_RS03470 PF14824 Sirohaem biosynthesis protein central COW1_RS03470 PF10414 Sirohaem synthase dimerisation region COW1_RS03470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases COW1_RS03475 PF00717 Peptidase S24-like COW1_RS03475 PF01381 Helix-turn-helix COW1_RS03485 PF07992 Pyridine nucleotide-disulphide oxidoreductase COW1_RS03490 PF00128 Alpha amylase, catalytic domain COW1_RS03500 PF00196 Bacterial regulatory proteins, luxR family COW1_RS03500 PF00072 Response regulator receiver domain COW1_RS03505 PF07730 Histidine kinase COW1_RS03505 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term COW1_RS03505 PF00672 HAMP domain COW1_RS03505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS03515 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain COW1_RS03515 PF07685 CobB/CobQ-like glutamine amidotransferase domain COW1_RS03525 PF13247 4Fe-4S dicluster domain COW1_RS03535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster COW1_RS03535 PF07992 Pyridine nucleotide-disulphide oxidoreductase COW1_RS03550 PF04358 DsrC like protein COW1_RS03560 PF02635 DsrE/DsrF-like family COW1_RS03565 PF02635 DsrE/DsrF-like family COW1_RS03570 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain COW1_RS03570 PF01077 Nitrite and sulphite reductase 4Fe-4S domain COW1_RS03575 PF01077 Nitrite and sulphite reductase 4Fe-4S domain COW1_RS03575 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain COW1_RS03605 PF18331 PKHD-type hydroxylase C-terminal domain COW1_RS03605 PF13640 2OG-Fe(II) oxygenase superfamily COW1_RS03620 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS03625 PF01925 Sulfite exporter TauE/SafE COW1_RS03630 PF09500 Putative thioesterase (yiiD_Cterm) COW1_RS03630 PF00583 Acetyltransferase (GNAT) family COW1_RS03655 PF05922 Peptidase inhibitor I9 COW1_RS03655 PF00082 Subtilase family COW1_RS03685 PF01027 Inhibitor of apoptosis-promoting Bax1 COW1_RS03705 PF00574 Clp protease COW1_RS03755 PF00158 Sigma-54 interaction domain COW1_RS03755 PF00072 Response regulator receiver domain COW1_RS03755 PF02954 Bacterial regulatory protein, Fis family COW1_RS03790 PF00196 Bacterial regulatory proteins, luxR family COW1_RS03790 PF00072 Response regulator receiver domain COW1_RS03795 PF03167 Uracil DNA glycosylase superfamily COW1_RS03800 PF02151 UvrB/uvrC motif COW1_RS03800 PF08459 UvrC Helix-hairpin-helix N-terminal COW1_RS03800 PF01541 GIY-YIG catalytic domain COW1_RS03805 PF01066 CDP-alcohol phosphatidyltransferase COW1_RS03830 PF00274 Fructose-bisphosphate aldolase class-I COW1_RS03845 PF01145 SPFH domain / Band 7 family COW1_RS03850 PF07298 NnrU protein COW1_RS03855 PF02445 Quinolinate synthetase A protein COW1_RS03870 PF00924 Mechanosensitive ion channel COW1_RS03875 PF16078 2-oxoglutarate dehydrogenase N-terminus COW1_RS03875 PF00676 Dehydrogenase E1 component COW1_RS03875 PF16870 2-oxoglutarate dehydrogenase C-terminal COW1_RS03875 PF02779 Transketolase, pyrimidine binding domain COW1_RS03880 PF00364 Biotin-requiring enzyme COW1_RS03880 PF02817 e3 binding domain COW1_RS03880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) COW1_RS03885 PF07992 Pyridine nucleotide-disulphide oxidoreductase COW1_RS03885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain COW1_RS03890 PF13194 Domain of unknown function (DUF4010) COW1_RS03900 PF01747 ATP-sulfurylase COW1_RS03900 PF14306 PUA-like domain COW1_RS03920 PF18030 RimK PreATP-grasp domain COW1_RS03920 PF08443 RimK-like ATP-grasp domain COW1_RS03925 PF08443 RimK-like ATP-grasp domain COW1_RS03925 PF18030 RimK PreATP-grasp domain COW1_RS03930 PF04264 YceI-like domain COW1_RS03935 PF01292 Prokaryotic cytochrome b561 COW1_RS03945 PF01661 Macro domain COW1_RS03975 PF03600 Citrate transporter COW1_RS03985 PF01740 STAS domain COW1_RS03985 PF00916 Sulfate permease family COW1_RS03990 PF08521 Two-component sensor kinase N-terminal COW1_RS03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS03990 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS03995 PF00072 Response regulator receiver domain COW1_RS03995 PF00486 Transcriptional regulatory protein, C terminal COW1_RS04000 PF00266 Aminotransferase class-V COW1_RS04010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain COW1_RS04010 PF02770 Acyl-CoA dehydrogenase, middle domain COW1_RS04010 PF09317 Domain of unknown function (DUF1974) COW1_RS04010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain COW1_RS04015 PF00108 Thiolase, N-terminal domain COW1_RS04015 PF02803 Thiolase, C-terminal domain COW1_RS04020 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain COW1_RS04020 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain COW1_RS04020 PF00378 Enoyl-CoA hydratase/isomerase COW1_RS04025 PF00501 AMP-binding enzyme COW1_RS04030 PF03061 Thioesterase superfamily COW1_RS04040 PF01026 TatD related DNase COW1_RS04050 PF09115 DNA polymerase III, delta subunit, C terminal COW1_RS04055 PF02223 Thymidylate kinase COW1_RS04060 PF00849 RNA pseudouridylate synthase COW1_RS04065 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COW1_RS04075 PF00285 Citrate synthase, C-terminal domain COW1_RS04085 PF02618 YceG-like family COW1_RS04090 PF01063 Amino-transferase class IV COW1_RS04095 PF00425 chorismate binding enzyme COW1_RS04095 PF04715 Anthranilate synthase component I, N terminal region COW1_RS04100 PF02801 Beta-ketoacyl synthase, C-terminal domain COW1_RS04100 PF00109 Beta-ketoacyl synthase, N-terminal domain COW1_RS04105 PF00550 Phosphopantetheine attachment site COW1_RS04115 PF00698 Acyl transferase domain COW1_RS04120 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal COW1_RS04120 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III COW1_RS04125 PF02504 Fatty acid synthesis protein COW1_RS04130 PF01783 Ribosomal L32p protein family COW1_RS04140 PF00289 Biotin carboxylase, N-terminal domain COW1_RS04140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain COW1_RS04140 PF02785 Biotin carboxylase C-terminal domain COW1_RS04150 PF00364 Biotin-requiring enzyme COW1_RS04150 PF02436 Conserved carboxylase domain COW1_RS04150 PF00682 HMGL-like COW1_RS04155 PF02545 Maf-like protein COW1_RS04165 PF06965 Na+/H+ antiporter 1 COW1_RS04165 PF01343 Peptidase family S49 COW1_RS04170 PF13419 Haloacid dehalogenase-like hydrolase COW1_RS04175 PF00849 RNA pseudouridylate synthase COW1_RS04175 PF01479 S4 domain COW1_RS04180 PF00575 S1 RNA binding domain COW1_RS04180 PF12111 Polyribonucleotide phosphorylase C terminal COW1_RS04180 PF10150 Ribonuclease E/G family COW1_RS04185 PF01451 Low molecular weight phosphotyrosine protein phosphatase COW1_RS04200 PF00563 EAL domain COW1_RS04200 PF01590 GAF domain COW1_RS04200 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS04200 PF00360 Phytochrome region COW1_RS04230 PF02348 Cytidylyltransferase COW1_RS04235 PF03966 Trm112p-like protein COW1_RS04240 PF02606 Tetraacyldisaccharide-1-P 4'-kinase COW1_RS04245 PF00664 ABC transporter transmembrane region COW1_RS04245 PF00005 ABC transporter COW1_RS04250 PF02472 Biopolymer transport protein ExbD/TolR COW1_RS04255 PF01618 MotA/TolQ/ExbB proton channel family COW1_RS04260 PF03772 Competence protein COW1_RS04260 PF13567 Domain of unknown function (DUF4131) COW1_RS04260 PF00753 Metallo-beta-lactamase superfamily COW1_RS04270 PF00005 ABC transporter COW1_RS04275 PF02687 FtsX-like permease family COW1_RS04275 PF12704 MacB-like periplasmic core domain COW1_RS04290 PF04371 Porphyromonas-type peptidyl-arginine deiminase COW1_RS04295 PF00795 Carbon-nitrogen hydrolase COW1_RS04300 PF04055 Radical SAM superfamily COW1_RS04300 PF06968 Biotin and Thiamin Synthesis associated domain COW1_RS04300 PF00202 Aminotransferase class-III COW1_RS04305 PF18152 DAHP synthase ferredoxin-like domain COW1_RS04305 PF00793 DAHP synthetase I family COW1_RS04315 PF02954 Bacterial regulatory protein, Fis family COW1_RS04315 PF01590 GAF domain COW1_RS04315 PF00158 Sigma-54 interaction domain COW1_RS04320 PF07992 Pyridine nucleotide-disulphide oxidoreductase COW1_RS04330 PF16925 Tetracyclin repressor-like, C-terminal domain COW1_RS04330 PF00440 Bacterial regulatory proteins, tetR family COW1_RS04340 PF13686 DsrE/DsrF/DrsH-like family COW1_RS04360 PF00814 Glycoprotease family COW1_RS04365 PF13307 Helicase C-terminal domain COW1_RS04365 PF04851 Type III restriction enzyme, res subunit COW1_RS04380 PF00905 Penicillin binding protein transpeptidase domain COW1_RS04380 PF14814 Bifunctional transglycosylase second domain COW1_RS04380 PF00912 Transglycosylase COW1_RS04395 PF05724 Thiopurine S-methyltransferase (TPMT) COW1_RS04400 PF01565 FAD binding domain COW1_RS04400 PF02913 FAD linked oxidases, C-terminal domain COW1_RS04405 PF01565 FAD binding domain COW1_RS04410 PF13183 4Fe-4S dicluster domain COW1_RS04410 PF02754 Cysteine-rich domain COW1_RS04415 PF00872 Transposase, Mutator family COW1_RS04420 PF02754 Cysteine-rich domain COW1_RS04420 PF13183 4Fe-4S dicluster domain COW1_RS04460 PF06039 Malate:quinone oxidoreductase (Mqo) COW1_RS04475 PF17969 L,D-transpeptidase C-terminal domain COW1_RS04475 PF03734 L,D-transpeptidase catalytic domain COW1_RS04490 PF12826 Helix-hairpin-helix motif COW1_RS04490 PF00533 BRCA1 C Terminus (BRCT) domain COW1_RS04490 PF01653 NAD-dependent DNA ligase adenylation domain COW1_RS04490 PF03120 NAD-dependent DNA ligase OB-fold domain COW1_RS04490 PF03119 NAD-dependent DNA ligase C4 zinc finger domain COW1_RS04495 PF04354 ZipA, C-terminal FtsZ-binding domain COW1_RS04500 PF02463 RecF/RecN/SMC N terminal domain COW1_RS04505 PF14489 QueF-like protein COW1_RS04510 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COW1_RS04520 PF00155 Aminotransferase class I and II COW1_RS04525 PF13419 Haloacid dehalogenase-like hydrolase COW1_RS04530 PF01258 Prokaryotic dksA/traR C4-type zinc finger COW1_RS04535 PF00749 tRNA synthetases class I (E and Q), catalytic domain COW1_RS04545 PF13193 AMP-binding enzyme C-terminal domain COW1_RS04545 PF00501 AMP-binding enzyme COW1_RS04545 PF16177 Acetyl-coenzyme A synthetase N-terminus COW1_RS04550 PF00072 Response regulator receiver domain COW1_RS04550 PF00486 Transcriptional regulatory protein, C terminal COW1_RS04565 PF00013 KH domain COW1_RS04565 PF00575 S1 RNA binding domain COW1_RS04565 PF03725 3' exoribonuclease family, domain 2 COW1_RS04565 PF01138 3' exoribonuclease family, domain 1 COW1_RS04565 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain COW1_RS04570 PF00312 Ribosomal protein S15 COW1_RS04575 PF01509 TruB family pseudouridylate synthase (N terminal domain) COW1_RS04575 PF09157 Pseudouridine synthase II TruB, C-terminal COW1_RS04575 PF16198 tRNA pseudouridylate synthase B C-terminal domain COW1_RS04580 PF02033 Ribosome-binding factor A COW1_RS04585 PF08364 Bacterial translation initiation factor IF-2 associated region COW1_RS04585 PF00009 Elongation factor Tu GTP binding domain COW1_RS04585 PF04760 Translation initiation factor IF-2, N-terminal region COW1_RS04585 PF11987 Translation-initiation factor 2 COW1_RS04590 PF13184 NusA-like KH domain COW1_RS04590 PF08529 NusA N-terminal domain COW1_RS04595 PF17384 RimP C-terminal SH3 domain COW1_RS04595 PF02576 RimP N-terminal domain COW1_RS04605 PF00873 AcrB/AcrD/AcrF family COW1_RS04610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COW1_RS04615 PF00440 Bacterial regulatory proteins, tetR family COW1_RS04620 PF03600 Citrate transporter COW1_RS04620 PF02080 TrkA-C domain COW1_RS04635 PF00106 short chain dehydrogenase COW1_RS04640 PF13411 MerR HTH family regulatory protein COW1_RS04645 PF05430 S-adenosyl-L-methionine-dependent methyltransferase COW1_RS04645 PF01266 FAD dependent oxidoreductase COW1_RS04675 PF04357 TamB, inner membrane protein subunit of TAM complex COW1_RS04680 PF17243 POTRA domain TamA domain 1 COW1_RS04680 PF01103 Surface antigen COW1_RS04680 PF07244 Surface antigen variable number repeat COW1_RS04685 PF05191 Adenylate kinase, active site lid COW1_RS04695 PF00689 Cation transporting ATPase, C-terminus COW1_RS04695 PF00690 Cation transporter/ATPase, N-terminus COW1_RS04700 PF00871 Acetokinase family COW1_RS04705 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase COW1_RS04705 PF09363 XFP C-terminal domain COW1_RS04705 PF09364 XFP N-terminal domain COW1_RS04730 PF00361 Proton-conducting membrane transporter COW1_RS04735 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus COW1_RS04735 PF00361 Proton-conducting membrane transporter COW1_RS04740 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus COW1_RS04740 PF00361 Proton-conducting membrane transporter COW1_RS04745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L COW1_RS04750 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 COW1_RS04755 PF12838 4Fe-4S dicluster domain COW1_RS04760 PF00146 NADH dehydrogenase COW1_RS04765 PF00384 Molybdopterin oxidoreductase COW1_RS04765 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region COW1_RS04765 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal COW1_RS04770 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit COW1_RS04770 PF10531 SLBB domain COW1_RS04770 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region COW1_RS04780 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit COW1_RS04790 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit COW1_RS04795 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit COW1_RS04800 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 COW1_RS04810 PF03840 Preprotein translocase SecG subunit COW1_RS04815 PF00121 Triosephosphate isomerase COW1_RS04820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain COW1_RS04820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I COW1_RS04820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III COW1_RS04820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II COW1_RS04825 PF00809 Pterin binding enzyme COW1_RS04830 PF01434 Peptidase family M41 COW1_RS04830 PF00004 ATPase family associated with various cellular activities (AAA) COW1_RS04830 PF06480 FtsH Extracellular COW1_RS04830 PF17862 AAA+ lid domain COW1_RS04835 PF01728 FtsJ-like methyltransferase COW1_RS04850 PF03449 Transcription elongation factor, N-terminal COW1_RS04850 PF01272 Transcription elongation factor, GreA/GreB, C-term COW1_RS04855 PF02142 MGS-like domain COW1_RS04855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain COW1_RS04855 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain COW1_RS04860 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain COW1_RS04860 PF00117 Glutamine amidotransferase class-I COW1_RS04865 PF05173 Dihydrodipicolinate reductase, C-terminus COW1_RS04865 PF01113 Dihydrodipicolinate reductase, N-terminus COW1_RS04870 PF00226 DnaJ domain COW1_RS04870 PF01556 DnaJ C terminal domain COW1_RS04870 PF00684 DnaJ central domain COW1_RS04875 PF00012 Hsp70 protein COW1_RS04880 PF01025 GrpE COW1_RS04885 PF01628 HrcA protein C terminal domain COW1_RS04885 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding COW1_RS04890 PF01513 ATP-NAD kinase COW1_RS04895 PF02463 RecF/RecN/SMC N terminal domain COW1_RS04900 PF01475 Ferric uptake regulator family COW1_RS04905 PF04355 SmpA / OmlA family COW1_RS04910 PF03658 RnfH family Ubiquitin COW1_RS04915 PF03364 Polyketide cyclase / dehydrase and lipid transport COW1_RS04920 PF00209 Sodium:neurotransmitter symporter family COW1_RS04925 PF01668 SmpB protein COW1_RS04940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase COW1_RS04950 PF00890 FAD binding domain COW1_RS04955 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit COW1_RS04955 PF13187 4Fe-4S dicluster domain COW1_RS04965 PF00929 Exonuclease COW1_RS04965 PF08411 Exonuclease C-terminal COW1_RS04980 PF00929 Exonuclease COW1_RS04980 PF08411 Exonuclease C-terminal COW1_RS04985 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS04985 PF08448 PAS fold COW1_RS05000 PF03971 Monomeric isocitrate dehydrogenase COW1_RS05005 PF01699 Sodium/calcium exchanger protein COW1_RS05025 PF10417 C-terminal domain of 1-Cys peroxiredoxin COW1_RS05025 PF00578 AhpC/TSA family COW1_RS05045 PF01384 Phosphate transporter family COW1_RS05050 PF00563 EAL domain COW1_RS05050 PF03707 Bacterial signalling protein N terminal repeat COW1_RS05050 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS05055 PF00085 Thioredoxin COW1_RS05060 PF13847 Methyltransferase domain COW1_RS05070 PF00535 Glycosyl transferase family 2 COW1_RS05080 PF09335 SNARE associated Golgi protein COW1_RS05125 PF00141 Peroxidase COW1_RS05145 PF00005 ABC transporter COW1_RS05145 PF17760 UvrA interaction domain COW1_RS05145 PF17755 UvrA DNA-binding domain COW1_RS05175 PF08241 Methyltransferase domain COW1_RS05180 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain COW1_RS05180 PF05221 S-adenosyl-L-homocysteine hydrolase COW1_RS05195 PF00535 Glycosyl transferase family 2 COW1_RS05210 PF00034 Cytochrome c COW1_RS05215 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COW1_RS05225 PF16124 RecQ zinc-binding COW1_RS05225 PF00570 HRDC domain COW1_RS05225 PF00271 Helicase conserved C-terminal domain COW1_RS05225 PF00270 DEAD/DEAH box helicase COW1_RS05225 PF09382 RQC domain COW1_RS05230 PF10017 Histidine-specific methyltransferase, SAM-dependent COW1_RS05235 PF03781 Sulfatase-modifying factor enzyme 1 COW1_RS05235 PF12867 DinB superfamily COW1_RS05240 PF00472 RF-1 domain COW1_RS05255 PF00313 'Cold-shock' DNA-binding domain COW1_RS05280 PF00561 alpha/beta hydrolase fold COW1_RS05290 PF00266 Aminotransferase class-V COW1_RS05295 PF00082 Subtilase family COW1_RS05295 PF04151 Bacterial pre-peptidase C-terminal domain COW1_RS05300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COW1_RS05300 PF00005 ABC transporter COW1_RS05305 PF00528 Binding-protein-dependent transport system inner membrane component COW1_RS05305 PF12911 N-terminal TM domain of oligopeptide transport permease C COW1_RS05310 PF00528 Binding-protein-dependent transport system inner membrane component COW1_RS05325 PF00375 Sodium:dicarboxylate symporter family COW1_RS05330 PF13145 PPIC-type PPIASE domain COW1_RS05345 PF00216 Bacterial DNA-binding protein COW1_RS05350 PF00004 ATPase family associated with various cellular activities (AAA) COW1_RS05350 PF05362 Lon protease (S16) C-terminal proteolytic domain COW1_RS05350 PF02190 ATP-dependent protease La (LON) substrate-binding domain COW1_RS05355 PF07724 AAA domain (Cdc48 subfamily) COW1_RS05355 PF10431 C-terminal, D2-small domain, of ClpB protein COW1_RS05355 PF06689 ClpX C4-type zinc finger COW1_RS05360 PF00574 Clp protease COW1_RS05365 PF05697 Bacterial trigger factor protein (TF) COW1_RS05365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase COW1_RS05365 PF05698 Bacterial trigger factor protein (TF) C-terminus COW1_RS05395 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain COW1_RS05395 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain COW1_RS05400 PF08448 PAS fold COW1_RS05400 PF00563 EAL domain COW1_RS05400 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS05410 PF09190 DALR domain COW1_RS05410 PF01406 tRNA synthetases class I (C) catalytic domain COW1_RS05415 PF00749 tRNA synthetases class I (E and Q), catalytic domain COW1_RS05420 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD COW1_RS05425 PF00149 Calcineurin-like phosphoesterase COW1_RS05440 PF04305 Protein of unknown function (DUF455) COW1_RS05445 PF13660 Domain of unknown function (DUF4147) COW1_RS05445 PF05161 MOFRL family COW1_RS05455 PF01053 Cys/Met metabolism PLP-dependent enzyme COW1_RS05460 PF00156 Phosphoribosyl transferase domain COW1_RS05475 PF02875 Mur ligase family, glutamate ligase domain COW1_RS05475 PF08245 Mur ligase middle domain COW1_RS05480 PF01039 Carboxyl transferase domain COW1_RS05480 PF17848 Acetyl-coA carboxylase zinc finger domain COW1_RS05485 PF00290 Tryptophan synthase alpha chain COW1_RS05490 PF00291 Pyridoxal-phosphate dependent enzyme COW1_RS05495 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase COW1_RS05500 PF01416 tRNA pseudouridine synthase COW1_RS05530 PF02774 Semialdehyde dehydrogenase, dimerisation domain COW1_RS05530 PF01118 Semialdehyde dehydrogenase, NAD binding domain COW1_RS05535 PF00180 Isocitrate/isopropylmalate dehydrogenase COW1_RS05540 PF00694 Aconitase C-terminal domain COW1_RS05545 PF00330 Aconitase family (aconitate hydratase) COW1_RS05550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COW1_RS05560 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS05560 PF08448 PAS fold COW1_RS05560 PF00563 EAL domain COW1_RS05565 PF01791 DeoC/LacD family aldolase COW1_RS05575 PF00072 Response regulator receiver domain COW1_RS05580 PF01264 Chorismate synthase COW1_RS05590 PF06969 HemN C-terminal domain COW1_RS05590 PF04055 Radical SAM superfamily COW1_RS05595 PF05175 Methyltransferase small domain COW1_RS05600 PF02630 SCO1/SenC COW1_RS05610 PF02666 Phosphatidylserine decarboxylase COW1_RS05615 PF00459 Inositol monophosphatase family COW1_RS05635 PF07549 SecD/SecF GG Motif COW1_RS05635 PF02355 Protein export membrane protein COW1_RS05640 PF07549 SecD/SecF GG Motif COW1_RS05640 PF02355 Protein export membrane protein COW1_RS05640 PF13721 SecD export protein N-terminal TM region COW1_RS05645 PF02699 Preprotein translocase subunit COW1_RS05650 PF01702 Queuine tRNA-ribosyltransferase COW1_RS05655 PF02547 Queuosine biosynthesis protein COW1_RS05665 PF11897 Protein of unknown function (DUF3417) COW1_RS05665 PF00343 Carbohydrate phosphorylase COW1_RS05670 PF02446 4-alpha-glucanotransferase COW1_RS05680 PF00483 Nucleotidyl transferase COW1_RS05685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) COW1_RS05685 PF02806 Alpha amylase, C-terminal all-beta domain COW1_RS05685 PF00128 Alpha amylase, catalytic domain COW1_RS05700 PF04055 Radical SAM superfamily COW1_RS05705 PF01875 Memo-like protein COW1_RS05710 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase COW1_RS05710 PF01871 AMMECR1 COW1_RS05740 PF01312 FlhB HrpN YscU SpaS Family COW1_RS05760 PF01584 CheW-like domain COW1_RS05770 PF13614 AAA domain COW1_RS05775 PF01339 CheB methylesterase COW1_RS05775 PF00072 Response regulator receiver domain COW1_RS05780 PF00072 Response regulator receiver domain COW1_RS05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS05780 PF01627 Hpt domain COW1_RS05780 PF01584 CheW-like domain COW1_RS05780 PF02895 Signal transducing histidine kinase, homodimeric domain COW1_RS05785 PF04344 Chemotaxis phosphatase, CheZ COW1_RS05790 PF00072 Response regulator receiver domain COW1_RS05795 PF04545 Sigma-70, region 4 COW1_RS05795 PF04539 Sigma-70 region 3 COW1_RS05795 PF04542 Sigma-70 region 2 COW1_RS05800 PF10609 NUBPL iron-transfer P-loop NTPase COW1_RS05805 PF00448 SRP54-type protein, GTPase domain COW1_RS05810 PF00771 FHIPEP family COW1_RS05815 PF01312 FlhB HrpN YscU SpaS Family COW1_RS05820 PF01311 Bacterial export proteins, family 1 COW1_RS05825 PF01313 Bacterial export proteins, family 3 COW1_RS05830 PF00813 FliP family COW1_RS05835 PF04347 Flagellar biosynthesis protein, FliO COW1_RS05840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term COW1_RS05845 PF02154 Flagellar motor switch protein FliM COW1_RS05845 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term COW1_RS05855 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) COW1_RS05865 PF00270 DEAD/DEAH box helicase COW1_RS05865 PF00271 Helicase conserved C-terminal domain COW1_RS05870 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) COW1_RS05900 PF02899 Phage integrase, N-terminal SAM-like domain COW1_RS05900 PF00589 Phage integrase family COW1_RS05915 PF00563 EAL domain COW1_RS05915 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS05915 PF03707 Bacterial signalling protein N terminal repeat COW1_RS05930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COW1_RS05930 PF18269 T3SS EscN ATPase C-terminal domain COW1_RS05935 PF02108 Flagellar assembly protein FliH COW1_RS05940 PF14842 FliG N-terminal domain COW1_RS05940 PF01706 FliG C-terminal domain COW1_RS05940 PF14841 FliG middle domain COW1_RS05945 PF08345 Flagellar M-ring protein C-terminal COW1_RS05945 PF01514 Secretory protein of YscJ/FliF family COW1_RS05950 PF02049 Flagellar hook-basal body complex protein FliE COW1_RS05955 PF00158 Sigma-54 interaction domain COW1_RS05955 PF00072 Response regulator receiver domain COW1_RS05955 PF02954 Bacterial regulatory protein, Fis family COW1_RS05960 PF13188 PAS domain COW1_RS05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS05960 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS05965 PF02954 Bacterial regulatory protein, Fis family COW1_RS05965 PF06490 Flagellar regulatory protein FleQ COW1_RS05965 PF00158 Sigma-54 interaction domain COW1_RS05980 PF02561 Flagellar protein FliS COW1_RS05985 PF07195 Flagellar hook-associated protein 2 C-terminus COW1_RS05985 PF02465 Flagellar hook-associated protein 2 N-terminus COW1_RS05995 PF00700 Bacterial flagellin C-terminal helical region COW1_RS05995 PF00669 Bacterial flagellin N-terminal helical region COW1_RS06000 PF08448 PAS fold COW1_RS06000 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS06000 PF00563 EAL domain COW1_RS06010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COW1_RS06010 PF00460 Flagella basal body rod protein COW1_RS06015 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase COW1_RS06015 PF10135 Rod binding protein COW1_RS06020 PF02119 Flagellar P-ring protein COW1_RS06025 PF02107 Flagellar L-ring protein COW1_RS06030 PF00460 Flagella basal body rod protein COW1_RS06030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COW1_RS06035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COW1_RS06035 PF00460 Flagella basal body rod protein COW1_RS06040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COW1_RS06040 PF07559 Flagellar basal body protein FlaE COW1_RS06040 PF00460 Flagella basal body rod protein COW1_RS06045 PF13860 FlgD Ig-like domain COW1_RS06045 PF03963 Flagellar hook capping protein - N-terminal region COW1_RS06045 PF13861 FlgD Tudor-like domain COW1_RS06050 PF00460 Flagella basal body rod protein COW1_RS06050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COW1_RS06055 PF00460 Flagella basal body rod protein COW1_RS06060 PF03705 CheR methyltransferase, all-alpha domain COW1_RS06060 PF01739 CheR methyltransferase, SAM binding domain COW1_RS06065 PF01584 CheW-like domain COW1_RS06065 PF00072 Response regulator receiver domain COW1_RS06070 PF13144 Chaperone for flagella basal body P-ring formation COW1_RS06095 PF00654 Voltage gated chloride channel COW1_RS06100 PF00072 Response regulator receiver domain COW1_RS06105 PF00072 Response regulator receiver domain COW1_RS06105 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS06105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS06105 PF00672 HAMP domain COW1_RS06105 PF17149 Periplasmic sensor domain found in signal transduction proteins COW1_RS06105 PF01627 Hpt domain COW1_RS06115 PF13291 ACT domain COW1_RS06115 PF04607 Region found in RelA / SpoT proteins COW1_RS06115 PF02824 TGS domain COW1_RS06135 PF00005 ABC transporter COW1_RS06140 PF02405 Permease MlaE COW1_RS06145 PF01740 STAS domain COW1_RS06165 PF00149 Calcineurin-like phosphoesterase COW1_RS06180 PF04055 Radical SAM superfamily COW1_RS06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS06185 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS06185 PF01627 Hpt domain COW1_RS06185 PF00072 Response regulator receiver domain COW1_RS06185 PF00497 Bacterial extracellular solute-binding proteins, family 3 COW1_RS06210 PF01625 Peptide methionine sulfoxide reductase COW1_RS06220 PF00875 DNA photolyase COW1_RS06220 PF03441 FAD binding domain of DNA photolyase COW1_RS06225 PF00175 Oxidoreductase NAD-binding domain COW1_RS06225 PF00970 Oxidoreductase FAD-binding domain COW1_RS06235 PF00899 ThiF family COW1_RS06250 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain COW1_RS06250 PF01137 RNA 3'-terminal phosphate cyclase COW1_RS06255 PF03449 Transcription elongation factor, N-terminal COW1_RS06255 PF01272 Transcription elongation factor, GreA/GreB, C-term COW1_RS06265 PF00005 ABC transporter COW1_RS06270 PF01061 ABC-2 type transporter COW1_RS06275 PF00293 NUDIX domain COW1_RS06285 PF14403 Circularly permuted ATP-grasp type 2 COW1_RS06295 PF10005 zinc-ribbon domain COW1_RS06295 PF15887 Putative zinc-binding metallo-peptidase COW1_RS06380 PF01121 Dephospho-CoA kinase COW1_RS06405 PF00872 Transposase, Mutator family COW1_RS06420 PF02899 Phage integrase, N-terminal SAM-like domain COW1_RS06420 PF00589 Phage integrase family COW1_RS06515 PF00271 Helicase conserved C-terminal domain COW1_RS06515 PF00176 SNF2 family N-terminal domain COW1_RS06520 PF00580 UvrD/REP helicase N-terminal domain COW1_RS06520 PF13361 UvrD-like helicase C-terminal domain COW1_RS06525 PF00271 Helicase conserved C-terminal domain COW1_RS06525 PF00270 DEAD/DEAH box helicase COW1_RS06525 PF09369 Domain of unknown function (DUF1998) COW1_RS06555 PF00271 Helicase conserved C-terminal domain COW1_RS06555 PF00176 SNF2 family N-terminal domain COW1_RS06590 PF03747 ADP-ribosylglycohydrolase COW1_RS06640 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain COW1_RS06640 PF01077 Nitrite and sulphite reductase 4Fe-4S domain COW1_RS06645 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain COW1_RS06645 PF01077 Nitrite and sulphite reductase 4Fe-4S domain COW1_RS06650 PF00571 CBS domain COW1_RS06650 PF01743 Poly A polymerase head domain COW1_RS06660 PF00034 Cytochrome c COW1_RS06665 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COW1_RS06670 PF13649 Methyltransferase domain COW1_RS06705 PF01618 MotA/TolQ/ExbB proton channel family COW1_RS06710 PF02472 Biopolymer transport protein ExbD/TolR COW1_RS06745 PF00781 Diacylglycerol kinase catalytic domain COW1_RS06785 PF03279 Bacterial lipid A biosynthesis acyltransferase COW1_RS06805 PF00664 ABC transporter transmembrane region COW1_RS06805 PF00005 ABC transporter COW1_RS06825 PF00155 Aminotransferase class I and II COW1_RS06830 PF00550 Phosphopantetheine attachment site COW1_RS06840 PF13193 AMP-binding enzyme C-terminal domain COW1_RS06840 PF16197 Ketoacyl-synthetase C-terminal extension COW1_RS06840 PF00109 Beta-ketoacyl synthase, N-terminal domain COW1_RS06840 PF02801 Beta-ketoacyl synthase, C-terminal domain COW1_RS06840 PF00550 Phosphopantetheine attachment site COW1_RS06840 PF00202 Aminotransferase class-III COW1_RS06840 PF00668 Condensation domain COW1_RS06840 PF00501 AMP-binding enzyme COW1_RS06845 PF00082 Subtilase family COW1_RS06855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COW1_RS06855 PF03466 LysR substrate binding domain COW1_RS06860 PF04358 DsrC like protein COW1_RS06865 PF00478 IMP dehydrogenase / GMP reductase domain COW1_RS06865 PF00571 CBS domain COW1_RS06875 PF01464 Transglycosylase SLT domain COW1_RS06875 PF00497 Bacterial extracellular solute-binding proteins, family 3 COW1_RS06880 PF14437 MafB19-like deaminase COW1_RS06895 PF00753 Metallo-beta-lactamase superfamily COW1_RS06895 PF16123 Hydroxyacylglutathione hydrolase C-terminus COW1_RS06905 PF00155 Aminotransferase class I and II COW1_RS06910 PF08241 Methyltransferase domain COW1_RS06920 PF02535 ZIP Zinc transporter COW1_RS06925 PF02675 S-adenosylmethionine decarboxylase COW1_RS06935 PF00403 Heavy-metal-associated domain COW1_RS06960 PF00873 AcrB/AcrD/AcrF family COW1_RS06985 PF07690 Major Facilitator Superfamily COW1_RS06995 PF00005 ABC transporter COW1_RS07000 PF00005 ABC transporter COW1_RS07005 PF13533 Biotin-lipoyl like COW1_RS07025 PF00873 AcrB/AcrD/AcrF family COW1_RS07030 PF00529 HlyD membrane-fusion protein of T1SS COW1_RS07030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COW1_RS07075 PF00403 Heavy-metal-associated domain COW1_RS07080 PF01022 Bacterial regulatory protein, arsR family COW1_RS07145 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB COW1_RS07150 PF00117 Glutamine amidotransferase class-I COW1_RS07150 PF00958 GMP synthase C terminal domain COW1_RS07150 PF02540 NAD synthase COW1_RS07155 PF00478 IMP dehydrogenase / GMP reductase domain COW1_RS07155 PF00571 CBS domain COW1_RS07160 PF02601 Exonuclease VII, large subunit COW1_RS07160 PF13742 OB-fold nucleic acid binding domain COW1_RS07165 PF01476 LysM domain COW1_RS07165 PF01551 Peptidase family M23 COW1_RS07170 PF03707 Bacterial signalling protein N terminal repeat COW1_RS07170 PF00563 EAL domain COW1_RS07170 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS07175 PF01180 Dihydroorotate dehydrogenase COW1_RS07180 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase COW1_RS07180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COW1_RS07180 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg COW1_RS07180 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II COW1_RS07180 PF10371 Domain of unknown function COW1_RS07185 PF13472 GDSL-like Lipase/Acylhydrolase family COW1_RS07190 PF00005 ABC transporter COW1_RS07200 PF01740 STAS domain COW1_RS07200 PF00916 Sulfate permease family COW1_RS07205 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal COW1_RS07205 PF01926 50S ribosome-binding GTPase COW1_RS07210 PF13360 PQQ-like domain COW1_RS07220 PF13393 Histidyl-tRNA synthetase COW1_RS07220 PF03129 Anticodon binding domain COW1_RS07225 PF13464 Domain of unknown function (DUF4115) COW1_RS07235 PF04055 Radical SAM superfamily COW1_RS07240 PF00334 Nucleoside diphosphate kinase COW1_RS07245 PF04384 Iron-sulphur cluster assembly COW1_RS07250 PF02082 Transcriptional regulator COW1_RS07255 PF00132 Bacterial transferase hexapeptide (six repeats) COW1_RS07260 PF00588 SpoU rRNA Methylase family COW1_RS07275 PF00005 ABC transporter COW1_RS07280 PF02405 Permease MlaE COW1_RS07285 PF00152 tRNA synthetases class II (D, K and N) COW1_RS07290 PF01132 Elongation factor P (EF-P) OB domain COW1_RS07290 PF08207 Elongation factor P (EF-P) KOW-like domain COW1_RS07290 PF09285 Elongation factor P, C-terminal COW1_RS07295 PF04055 Radical SAM superfamily COW1_RS07310 PF00563 EAL domain COW1_RS07310 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS07310 PF08448 PAS fold COW1_RS07320 PF01435 Peptidase family M48 COW1_RS07325 PF00211 Adenylate and Guanylate cyclase catalytic domain COW1_RS07335 PF00563 EAL domain COW1_RS07335 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS07335 PF03707 Bacterial signalling protein N terminal repeat COW1_RS07340 PF00563 EAL domain COW1_RS07340 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS07340 PF08447 PAS fold COW1_RS07340 PF08448 PAS fold COW1_RS07360 PF03989 DNA gyrase C-terminal domain, beta-propeller COW1_RS07360 PF00521 DNA gyrase/topoisomerase IV, subunit A COW1_RS07365 PF01751 Toprim domain COW1_RS07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS07365 PF00204 DNA gyrase B COW1_RS07365 PF00986 DNA gyrase B subunit, carboxyl terminus COW1_RS07385 PF02915 Rubrerythrin COW1_RS07390 PF00141 Peroxidase COW1_RS07395 PF06594 Haemolysin-type calcium binding protein related domain COW1_RS07395 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) COW1_RS07410 PF03412 Peptidase C39 family COW1_RS07410 PF00664 ABC transporter transmembrane region COW1_RS07410 PF00005 ABC transporter COW1_RS07425 PF02609 Exonuclease VII small subunit COW1_RS07430 PF00348 Polyprenyl synthetase COW1_RS07435 PF13292 1-deoxy-D-xylulose-5-phosphate synthase COW1_RS07435 PF02779 Transketolase, pyrimidine binding domain COW1_RS07435 PF02780 Transketolase, C-terminal domain COW1_RS07440 PF01242 6-pyruvoyl tetrahydropterin synthase COW1_RS07445 PF02649 Type I GTP cyclohydrolase folE2 COW1_RS07455 PF04608 Phosphatidylglycerophosphatase A COW1_RS07460 PF00586 AIR synthase related protein, N-terminal domain COW1_RS07460 PF02769 AIR synthase related protein, C-terminal domain COW1_RS07465 PF01029 NusB family COW1_RS07470 PF00885 6,7-dimethyl-8-ribityllumazine synthase COW1_RS07475 PF00925 GTP cyclohydrolase II COW1_RS07475 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase COW1_RS07480 PF00677 Lumazine binding domain COW1_RS07485 PF01872 RibD C-terminal domain COW1_RS07485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region COW1_RS07490 PF03477 ATP cone domain COW1_RS07495 PF00464 Serine hydroxymethyltransferase COW1_RS07505 PF00005 ABC transporter COW1_RS07505 PF12848 ABC transporter COW1_RS07510 PF03466 LysR substrate binding domain COW1_RS07510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COW1_RS07520 PF01794 Ferric reductase like transmembrane component COW1_RS07525 PF00174 Oxidoreductase molybdopterin binding domain COW1_RS07530 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal COW1_RS07530 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain COW1_RS07530 PF02769 AIR synthase related protein, C-terminal domain COW1_RS07535 PF00753 Metallo-beta-lactamase superfamily COW1_RS07540 PF06804 NlpB/DapX lipoprotein COW1_RS07545 PF00701 Dihydrodipicolinate synthetase family COW1_RS07555 PF01842 ACT domain COW1_RS07560 PF00578 AhpC/TSA family COW1_RS07565 PF13638 PIN domain COW1_RS07565 PF02562 PhoH-like protein COW1_RS07570 PF01594 AI-2E family transporter COW1_RS07580 PF03466 LysR substrate binding domain COW1_RS07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COW1_RS07585 PF00873 AcrB/AcrD/AcrF family COW1_RS07590 PF13533 Biotin-lipoyl like COW1_RS07595 PF16591 Helical bimodular sensor domain COW1_RS07595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COW1_RS07595 PF00672 HAMP domain COW1_RS07600 PF00672 HAMP domain COW1_RS07600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COW1_RS07600 PF12729 Four helix bundle sensory module for signal transduction COW1_RS07615 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) COW1_RS07620 PF01206 Sulfurtransferase TusA COW1_RS07625 PF00581 Rhodanese-like domain COW1_RS07630 PF13181 Tetratricopeptide repeat COW1_RS07630 PF01435 Peptidase family M48 COW1_RS07655 PF02872 5'-nucleotidase, C-terminal domain COW1_RS07655 PF00149 Calcineurin-like phosphoesterase COW1_RS07660 PF00753 Metallo-beta-lactamase superfamily COW1_RS07670 PF00593 TonB dependent receptor COW1_RS07670 PF07715 TonB-dependent Receptor Plug Domain COW1_RS07690 PF00593 TonB dependent receptor COW1_RS07690 PF07715 TonB-dependent Receptor Plug Domain COW1_RS07690 PF07660 Secretin and TonB N terminus short domain COW1_RS07705 PF08267 Cobalamin-independent synthase, N-terminal domain COW1_RS07705 PF01717 Cobalamin-independent synthase, Catalytic domain COW1_RS07710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COW1_RS07710 PF03466 LysR substrate binding domain COW1_RS07715 PF02867 Ribonucleotide reductase, barrel domain COW1_RS07715 PF03477 ATP cone domain COW1_RS07715 PF00317 Ribonucleotide reductase, all-alpha domain COW1_RS07720 PF00268 Ribonucleotide reductase, small chain COW1_RS07725 PF00005 ABC transporter COW1_RS07725 PF00664 ABC transporter transmembrane region COW1_RS07735 PF00005 ABC transporter COW1_RS07740 PF01032 FecCD transport family COW1_RS07745 PF01497 Periplasmic binding protein COW1_RS07750 PF01243 Pyridoxamine 5'-phosphate oxidase COW1_RS07760 PF00593 TonB dependent receptor COW1_RS07760 PF07715 TonB-dependent Receptor Plug Domain COW1_RS07765 PF18496 Collagenase G catalytic helper subdomain COW1_RS07765 PF08453 Peptidase family M9 N-terminal COW1_RS07765 PF01752 Collagenase COW1_RS07790 PF00210 Ferritin-like domain COW1_RS07795 PF00300 Histidine phosphatase superfamily (branch 1) COW1_RS07800 PF03466 LysR substrate binding domain COW1_RS07800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COW1_RS07850 PF02322 Cytochrome bd terminal oxidase subunit II COW1_RS07855 PF01654 Cytochrome bd terminal oxidase subunit I COW1_RS07875 PF00753 Metallo-beta-lactamase superfamily COW1_RS07875 PF16123 Hydroxyacylglutathione hydrolase C-terminus COW1_RS07880 PF00158 Sigma-54 interaction domain COW1_RS07880 PF02954 Bacterial regulatory protein, Fis family COW1_RS07880 PF00072 Response regulator receiver domain COW1_RS07895 PF06508 Queuosine biosynthesis protein QueC COW1_RS07900 PF04055 Radical SAM superfamily COW1_RS07905 PF16331 TolA binding protein trimerisation COW1_RS07910 PF00691 OmpA family COW1_RS07915 PF07676 WD40-like Beta Propeller Repeat COW1_RS07915 PF04052 TolB amino-terminal domain COW1_RS07925 PF02472 Biopolymer transport protein ExbD/TolR COW1_RS07930 PF01618 MotA/TolQ/ExbB proton channel family COW1_RS07935 PF03061 Thioesterase superfamily COW1_RS07940 PF17864 RuvB AAA lid domain COW1_RS07940 PF05496 Holliday junction DNA helicase RuvB P-loop domain COW1_RS07940 PF05491 RuvB C-terminal winged helix domain COW1_RS07945 PF07499 RuvA, C-terminal domain COW1_RS07945 PF01330 RuvA N terminal domain COW1_RS07950 PF02075 Crossover junction endodeoxyribonuclease RuvC COW1_RS07955 PF01709 Transcriptional regulator COW1_RS07965 PF00293 NUDIX domain COW1_RS07970 PF01551 Peptidase family M23 COW1_RS07970 PF10145 Phage-related minor tail protein COW1_RS07970 PF01464 Transglycosylase SLT domain COW1_RS07975 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus COW1_RS07975 PF00361 Proton-conducting membrane transporter COW1_RS07975 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus COW1_RS07985 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) COW1_RS07995 PF05958 tRNA (Uracil-5-)-methyltransferase COW1_RS07995 PF01938 TRAM domain COW1_RS08015 PF00291 Pyridoxal-phosphate dependent enzyme COW1_RS08020 PF00593 TonB dependent receptor COW1_RS08020 PF07715 TonB-dependent Receptor Plug Domain COW1_RS08030 PF00672 HAMP domain COW1_RS08030 PF01627 Hpt domain COW1_RS08030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) COW1_RS08030 PF00072 Response regulator receiver domain COW1_RS08030 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS08030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS08035 PF01648 4'-phosphopantetheinyl transferase superfamily COW1_RS08040 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ COW1_RS08045 PF02565 Recombination protein O C terminal COW1_RS08045 PF11967 Recombination protein O N terminal COW1_RS08050 PF07650 KH domain COW1_RS08050 PF01926 50S ribosome-binding GTPase COW1_RS08055 PF14622 Ribonuclease-III-like COW1_RS08055 PF00035 Double-stranded RNA binding motif COW1_RS08065 PF10502 Signal peptidase, peptidase S26 COW1_RS08070 PF06421 GTP-binding protein LepA C-terminus COW1_RS08070 PF00009 Elongation factor Tu GTP binding domain COW1_RS08070 PF00679 Elongation factor G C-terminus COW1_RS08080 PF13180 PDZ domain COW1_RS08090 PF03888 MucB/RseB N-terminal domain COW1_RS08090 PF17188 MucB/RseB C-terminal domain COW1_RS08100 PF04542 Sigma-70 region 2 COW1_RS08100 PF08281 Sigma-70, region 4 COW1_RS08105 PF00890 FAD binding domain COW1_RS08105 PF02910 Fumarate reductase flavoprotein C-term COW1_RS08110 PF00708 Acylphosphatase COW1_RS08115 PF13533 Biotin-lipoyl like COW1_RS08130 PF00578 AhpC/TSA family COW1_RS08150 PF03960 ArsC family COW1_RS08155 PF03358 NADPH-dependent FMN reductase COW1_RS08165 PF00308 Bacterial dnaA protein COW1_RS08170 PF01594 AI-2E family transporter COW1_RS08175 PF01066 CDP-alcohol phosphatidyltransferase COW1_RS08185 PF02769 AIR synthase related protein, C-terminal domain COW1_RS08185 PF00586 AIR synthase related protein, N-terminal domain COW1_RS08190 PF00551 Formyl transferase COW1_RS08200 PF00155 Aminotransferase class I and II COW1_RS08205 PF00815 Histidinol dehydrogenase COW1_RS08210 PF01634 ATP phosphoribosyltransferase COW1_RS08215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) COW1_RS08220 PF01722 BolA-like protein COW1_RS08225 PF13466 STAS domain COW1_RS08230 PF02470 MlaD protein COW1_RS08235 PF02405 Permease MlaE COW1_RS08240 PF00005 ABC transporter COW1_RS08250 PF01699 Sodium/calcium exchanger protein COW1_RS08260 PF00571 CBS domain COW1_RS08260 PF01380 SIS domain COW1_RS08275 PF03968 OstA-like protein COW1_RS08280 PF12399 Branched-chain amino acid ATP-binding cassette transporter COW1_RS08280 PF00005 ABC transporter COW1_RS08285 PF04552 Sigma-54, DNA binding domain COW1_RS08285 PF04963 Sigma-54 factor, core binding domain COW1_RS08285 PF00309 Sigma-54 factor, Activator interacting domain (AID) COW1_RS08290 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein COW1_RS08295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COW1_RS08300 PF02603 HPr Serine kinase N terminus COW1_RS08300 PF07475 HPr Serine kinase C-terminal domain COW1_RS08305 PF03668 P-loop ATPase protein family COW1_RS08315 PF00381 PTS HPr component phosphorylation site COW1_RS08320 PF05524 PEP-utilising enzyme, N-terminal COW1_RS08320 PF00391 PEP-utilising enzyme, mobile domain COW1_RS08320 PF02896 PEP-utilising enzyme, TIM barrel domain COW1_RS08325 PF03448 MgtE intracellular N domain COW1_RS08325 PF01769 Divalent cation transporter COW1_RS08325 PF00571 CBS domain COW1_RS08335 PF16123 Hydroxyacylglutathione hydrolase C-terminus COW1_RS08335 PF00753 Metallo-beta-lactamase superfamily COW1_RS08340 PF00291 Pyridoxal-phosphate dependent enzyme COW1_RS08350 PF01523 Putative modulator of DNA gyrase COW1_RS08355 PF04751 Protein of unknown function (DUF615) COW1_RS08365 PF00689 Cation transporting ATPase, C-terminus COW1_RS08365 PF00690 Cation transporter/ATPase, N-terminus COW1_RS08385 PF00893 Small Multidrug Resistance protein COW1_RS08390 PF01523 Putative modulator of DNA gyrase COW1_RS08395 PF00795 Carbon-nitrogen hydrolase COW1_RS08405 PF13116 Protein of unknown function COW1_RS08405 PF13502 AsmA-like C-terminal region COW1_RS08410 PF00575 S1 RNA binding domain COW1_RS08410 PF10150 Ribonuclease E/G family COW1_RS08415 PF02545 Maf-like protein COW1_RS08420 PF02590 Predicted SPOUT methyltransferase COW1_RS08430 PF01467 Cytidylyltransferase-like COW1_RS08435 PF00171 Aldehyde dehydrogenase family COW1_RS08440 PF14840 Processivity clamp loader gamma complex DNA pol III C-term COW1_RS08440 PF06144 DNA polymerase III, delta subunit COW1_RS08450 PF00133 tRNA synthetases class I (I, L, M and V) COW1_RS08450 PF13603 Leucyl-tRNA synthetase, Domain 2 COW1_RS08450 PF08264 Anticodon-binding domain of tRNA COW1_RS08465 PF00795 Carbon-nitrogen hydrolase COW1_RS08470 PF00571 CBS domain COW1_RS08470 PF03471 Transporter associated domain COW1_RS08475 PF02130 Uncharacterized protein family UPF0054 COW1_RS08480 PF02562 PhoH-like protein COW1_RS08485 PF00919 Uncharacterized protein family UPF0004 COW1_RS08485 PF01938 TRAM domain COW1_RS08485 PF04055 Radical SAM superfamily COW1_RS08500 PF00342 Phosphoglucose isomerase COW1_RS08505 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain COW1_RS08505 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain COW1_RS08510 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain COW1_RS08510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase COW1_RS08515 PF00534 Glycosyl transferases group 1 COW1_RS08515 PF08323 Starch synthase catalytic domain COW1_RS08520 PF00311 Phosphoenolpyruvate carboxylase COW1_RS08530 PF00692 dUTPase COW1_RS08535 PF10609 NUBPL iron-transfer P-loop NTPase COW1_RS08540 PF01588 Putative tRNA binding domain COW1_RS08540 PF09334 tRNA synthetases class I (M) COW1_RS08545 PF02508 Rnf-Nqr subunit, membrane protein COW1_RS08550 PF04060 Putative Fe-S cluster COW1_RS08555 PF13375 RnfC Barrel sandwich hybrid domain COW1_RS08555 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit COW1_RS08555 PF12838 4Fe-4S dicluster domain COW1_RS08555 PF10531 SLBB domain COW1_RS08560 PF03116 NQR2, RnfD, RnfE family COW1_RS08565 PF04205 FMN-binding domain COW1_RS08570 PF02508 Rnf-Nqr subunit, membrane protein COW1_RS08575 PF00563 EAL domain COW1_RS08575 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS08575 PF08448 PAS fold COW1_RS08580 PF00730 HhH-GPD superfamily base excision DNA repair protein COW1_RS08580 PF00633 Helix-hairpin-helix motif COW1_RS08580 PF10576 Iron-sulfur binding domain of endonuclease III COW1_RS08590 PF05114 Protein of unknown function (DUF692) COW1_RS08600 PF07681 DoxX COW1_RS08605 PF02541 Ppx/GppA phosphatase family COW1_RS08615 PF12849 PBP superfamily domain COW1_RS08620 PF11808 Phosphate regulon sensor protein PhoR COW1_RS08620 PF00989 PAS fold COW1_RS08620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS08620 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS08625 PF00072 Response regulator receiver domain COW1_RS08625 PF00486 Transcriptional regulatory protein, C terminal COW1_RS08650 PF01235 Sodium:alanine symporter family COW1_RS08655 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain COW1_RS08655 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain COW1_RS08660 PF10996 Beta-Casp domain COW1_RS08660 PF00753 Metallo-beta-lactamase superfamily COW1_RS08660 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain COW1_RS08670 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS08670 PF00072 Response regulator receiver domain COW1_RS08680 PF00873 AcrB/AcrD/AcrF family COW1_RS08690 PF02954 Bacterial regulatory protein, Fis family COW1_RS08690 PF01590 GAF domain COW1_RS08690 PF00158 Sigma-54 interaction domain COW1_RS08700 PF00484 Carbonic anhydrase COW1_RS08710 PF02560 Cyanate lyase C-terminal domain COW1_RS08715 PF00005 ABC transporter COW1_RS08720 PF00528 Binding-protein-dependent transport system inner membrane component COW1_RS08730 PF01590 GAF domain COW1_RS08730 PF00158 Sigma-54 interaction domain COW1_RS08740 PF07411 Domain of unknown function (DUF1508) COW1_RS08755 PF00733 Asparagine synthase COW1_RS08755 PF13537 Glutamine amidotransferase domain COW1_RS08760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain COW1_RS08760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain COW1_RS08765 PF00474 Sodium:solute symporter family COW1_RS08770 PF00857 Isochorismatase family COW1_RS08775 PF01546 Peptidase family M20/M25/M40 COW1_RS08785 PF01475 Ferric uptake regulator family COW1_RS08790 PF01266 FAD dependent oxidoreductase COW1_RS08795 PF07963 Prokaryotic N-terminal methylation motif COW1_RS08795 PF08334 Type II secretion system (T2SS), protein G COW1_RS08840 PF05567 Neisseria PilC beta-propeller domain COW1_RS08850 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor COW1_RS08850 PF07963 Prokaryotic N-terminal methylation motif COW1_RS08855 PF02401 LytB protein COW1_RS08865 PF01252 Signal peptidase (SPase) II COW1_RS08870 PF06827 Zinc finger found in FPG and IleRS COW1_RS08870 PF00133 tRNA synthetases class I (I, L, M and V) COW1_RS08870 PF08264 Anticodon-binding domain of tRNA COW1_RS08875 PF01687 Riboflavin kinase COW1_RS08875 PF06574 FAD synthetase COW1_RS08885 PF03023 Lipid II flippase MurJ COW1_RS08890 PF01649 Ribosomal protein S20 COW1_RS08895 PF01472 PUA domain COW1_RS08895 PF00696 Amino acid kinase family COW1_RS08900 PF01018 GTP1/OBG COW1_RS08900 PF01926 50S ribosome-binding GTPase COW1_RS08905 PF01016 Ribosomal L27 protein COW1_RS08910 PF00829 Ribosomal prokaryotic L21 protein COW1_RS08915 PF00348 Polyprenyl synthetase COW1_RS08925 PF00817 impB/mucB/samB family COW1_RS08925 PF11798 IMS family HHH motif COW1_RS08925 PF11799 impB/mucB/samB family C-terminal domain COW1_RS08930 PF00717 Peptidase S24-like COW1_RS08930 PF01726 LexA DNA binding domain COW1_RS08950 PF03527 RHS protein COW1_RS08955 PF03527 RHS protein COW1_RS08960 PF03527 RHS protein COW1_RS08970 PF03527 RHS protein COW1_RS08980 PF03527 RHS protein COW1_RS08985 PF03527 RHS protein COW1_RS09005 PF04011 LemA family COW1_RS09015 PF00581 Rhodanese-like domain COW1_RS09020 PF04358 DsrC like protein COW1_RS09025 PF02082 Transcriptional regulator COW1_RS09030 PF04551 GcpE protein COW1_RS09035 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain COW1_RS09035 PF05221 S-adenosyl-L-homocysteine hydrolase COW1_RS09065 PF00226 DnaJ domain COW1_RS09065 PF01556 DnaJ C terminal domain COW1_RS09065 PF00684 DnaJ central domain COW1_RS09085 PF00581 Rhodanese-like domain COW1_RS09095 PF08497 Radical SAM N-terminal COW1_RS09095 PF04055 Radical SAM superfamily COW1_RS09095 PF11842 Domain of unknown function (DUF3362) COW1_RS09110 PF00111 2Fe-2S iron-sulfur cluster binding domain COW1_RS09110 PF00175 Oxidoreductase NAD-binding domain COW1_RS09110 PF00970 Oxidoreductase FAD-binding domain COW1_RS09135 PF01641 SelR domain COW1_RS09140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase COW1_RS09145 PF00005 ABC transporter COW1_RS09145 PF08402 TOBE domain COW1_RS09150 PF00528 Binding-protein-dependent transport system inner membrane component COW1_RS09155 PF13416 Bacterial extracellular solute-binding protein COW1_RS09160 PF02696 Uncharacterized ACR, YdiU/UPF0061 family COW1_RS09165 PF00459 Inositol monophosphatase family COW1_RS09190 PF03969 AFG1-like ATPase COW1_RS09195 PF16123 Hydroxyacylglutathione hydrolase C-terminus COW1_RS09195 PF00753 Metallo-beta-lactamase superfamily COW1_RS09205 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain COW1_RS09210 PF07298 NnrU protein COW1_RS09220 PF02082 Transcriptional regulator COW1_RS09235 PF00293 NUDIX domain COW1_RS09250 PF00593 TonB dependent receptor COW1_RS09250 PF07715 TonB-dependent Receptor Plug Domain COW1_RS09255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS09255 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS09255 PF08448 PAS fold COW1_RS09255 PF13426 PAS domain COW1_RS09255 PF00072 Response regulator receiver domain COW1_RS09260 PF00072 Response regulator receiver domain COW1_RS09265 PF00672 HAMP domain COW1_RS09265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COW1_RS09270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain COW1_RS09270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COW1_RS09280 PF00588 SpoU rRNA Methylase family COW1_RS09280 PF12105 SpoU, rRNA methylase, C-terminal COW1_RS09310 PF03372 Endonuclease/Exonuclease/phosphatase family COW1_RS09320 PF00300 Histidine phosphatase superfamily (branch 1) COW1_RS09325 PF01510 N-acetylmuramoyl-L-alanine amidase COW1_RS09335 PF00920 Dehydratase family COW1_RS09340 PF08447 PAS fold COW1_RS09340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COW1_RS09345 PF08443 RimK-like ATP-grasp domain COW1_RS09345 PF18030 RimK PreATP-grasp domain COW1_RS09350 PF00583 Acetyltransferase (GNAT) family COW1_RS09360 PF01546 Peptidase family M20/M25/M40 COW1_RS09360 PF07687 Peptidase dimerisation domain COW1_RS09365 PF00696 Amino acid kinase family COW1_RS09365 PF00583 Acetyltransferase (GNAT) family COW1_RS09370 PF00149 Calcineurin-like phosphoesterase COW1_RS09375 PF10415 Fumarase C C-terminus COW1_RS09375 PF00206 Lyase COW1_RS09390 PF00482 Type II secretion system (T2SS), protein F COW1_RS09395 PF00437 Type II/IV secretion system protein COW1_RS09400 PF00263 Bacterial type II and III secretion system protein COW1_RS09400 PF03958 Bacterial type II/III secretion system short domain COW1_RS09405 PF11356 Type II secretion system protein C COW1_RS09410 PF00271 Helicase conserved C-terminal domain COW1_RS09410 PF00270 DEAD/DEAH box helicase COW1_RS09415 PF00085 Thioredoxin COW1_RS09420 PF07497 Rho termination factor, RNA-binding domain COW1_RS09420 PF07498 Rho termination factor, N-terminal domain COW1_RS09420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COW1_RS09425 PF02843 Phosphoribosylglycinamide synthetase, C domain COW1_RS09425 PF02844 Phosphoribosylglycinamide synthetase, N domain COW1_RS09425 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain COW1_RS09430 PF02142 MGS-like domain COW1_RS09430 PF01808 AICARFT/IMPCHase bienzyme COW1_RS09435 PF02954 Bacterial regulatory protein, Fis family COW1_RS09440 PF01207 Dihydrouridine synthase (Dus) COW1_RS09455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain COW1_RS09455 PF02785 Biotin carboxylase C-terminal domain COW1_RS09455 PF00289 Biotin carboxylase, N-terminal domain COW1_RS09465 PF00364 Biotin-requiring enzyme COW1_RS09470 PF01220 Dehydroquinase class II COW1_RS09510 PF00437 Type II/IV secretion system protein COW1_RS09520 PF00263 Bacterial type II and III secretion system protein COW1_RS09520 PF13629 Pilus formation protein N terminal region COW1_RS09520 PF04972 BON domain COW1_RS09545 PF00360 Phytochrome region COW1_RS09545 PF01590 GAF domain COW1_RS09545 PF00563 EAL domain COW1_RS09545 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS09550 PF17200 Single Cache domain 2 COW1_RS09550 PF07730 Histidine kinase COW1_RS09555 PF00196 Bacterial regulatory proteins, luxR family COW1_RS09555 PF00072 Response regulator receiver domain COW1_RS09630 PF13614 AAA domain COW1_RS09635 PF01471 Putative peptidoglycan binding domain COW1_RS09635 PF13401 AAA domain COW1_RS09645 PF00459 Inositol monophosphatase family COW1_RS09650 PF00293 NUDIX domain COW1_RS09655 PF13419 Haloacid dehalogenase-like hydrolase COW1_RS09675 PF05134 Type II secretion system (T2SS), protein L COW1_RS09675 PF12693 GspL periplasmic domain COW1_RS09680 PF03934 Type II secretion system (T2SS), protein K COW1_RS09685 PF11612 Type II secretion system (T2SS), protein J COW1_RS09685 PF07963 Prokaryotic N-terminal methylation motif COW1_RS09695 PF07963 Prokaryotic N-terminal methylation motif COW1_RS09695 PF12019 Type II transport protein GspH COW1_RS09700 PF08334 Type II secretion system (T2SS), protein G COW1_RS09700 PF07963 Prokaryotic N-terminal methylation motif COW1_RS09710 PF08543 Phosphomethylpyrimidine kinase COW1_RS09715 PF02581 Thiamine monophosphate synthase COW1_RS09720 PF00202 Aminotransferase class-III COW1_RS09725 PF09335 SNARE associated Golgi protein COW1_RS09735 PF02441 Flavoprotein COW1_RS09740 PF01225 Mur ligase family, catalytic domain COW1_RS09740 PF08245 Mur ligase middle domain COW1_RS09740 PF02875 Mur ligase family, glutamate ligase domain COW1_RS09750 PF13091 PLD-like domain COW1_RS09755 PF05191 Adenylate kinase, active site lid COW1_RS09760 PF00365 Phosphofructokinase COW1_RS09765 PF03030 Inorganic H+ pyrophosphatase COW1_RS09770 PF00719 Inorganic pyrophosphatase COW1_RS09775 PF02391 MoaE protein COW1_RS09780 PF02597 ThiS family COW1_RS09785 PF01967 MoaC family COW1_RS09810 PF08668 HDOD domain COW1_RS09840 PF04204 Homoserine O-succinyltransferase COW1_RS09845 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS09855 PF00849 RNA pseudouridylate synthase COW1_RS09855 PF01479 S4 domain COW1_RS09865 PF00149 Calcineurin-like phosphoesterase COW1_RS09890 PF12848 ABC transporter COW1_RS09890 PF00005 ABC transporter COW1_RS09890 PF16326 ABC transporter C-terminal domain COW1_RS09900 PF01844 HNH endonuclease COW1_RS09905 PF07311 Dodecin COW1_RS09910 PF06150 ChaB COW1_RS09915 PF10518 TAT (twin-arginine translocation) pathway signal sequence COW1_RS09915 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding COW1_RS09915 PF07992 Pyridine nucleotide-disulphide oxidoreductase COW1_RS09935 PF03466 LysR substrate binding domain COW1_RS09935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COW1_RS09940 PF01740 STAS domain COW1_RS09940 PF00916 Sulfate permease family COW1_RS09950 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain COW1_RS09960 PF00210 Ferritin-like domain COW1_RS09965 PF00936 BMC domain COW1_RS09970 PF00936 BMC domain COW1_RS09975 PF00936 BMC domain COW1_RS09980 PF03319 Ethanolamine utilisation protein EutN/carboxysome COW1_RS10000 PF00101 Ribulose bisphosphate carboxylase, small chain COW1_RS10005 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain COW1_RS10005 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain COW1_RS10010 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COW1_RS10015 PF00271 Helicase conserved C-terminal domain COW1_RS10015 PF00270 DEAD/DEAH box helicase COW1_RS10025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COW1_RS10035 PF12704 MacB-like periplasmic core domain COW1_RS10035 PF00005 ABC transporter COW1_RS10035 PF02687 FtsX-like permease family COW1_RS10040 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS10040 PF01590 GAF domain COW1_RS10040 PF00360 Phytochrome region COW1_RS10040 PF00563 EAL domain COW1_RS10045 PF00873 AcrB/AcrD/AcrF family COW1_RS10060 PF06826 Predicted Permease Membrane Region COW1_RS10060 PF02080 TrkA-C domain COW1_RS10065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COW1_RS10065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COW1_RS10065 PF00205 Thiamine pyrophosphate enzyme, central domain COW1_RS10080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family COW1_RS10100 PF04069 Substrate binding domain of ABC-type glycine betaine transport system COW1_RS10105 PF00528 Binding-protein-dependent transport system inner membrane component COW1_RS10110 PF00005 ABC transporter COW1_RS10110 PF00571 CBS domain COW1_RS10120 PF00578 AhpC/TSA family COW1_RS10175 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS10180 PF03707 Bacterial signalling protein N terminal repeat COW1_RS10180 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS10180 PF00563 EAL domain COW1_RS10185 PF08447 PAS fold COW1_RS10185 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS10185 PF00563 EAL domain COW1_RS10185 PF08448 PAS fold COW1_RS10190 PF00563 EAL domain COW1_RS10190 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS10190 PF03707 Bacterial signalling protein N terminal repeat COW1_RS10230 PF05872 Bacterial protein of unknown function (DUF853) COW1_RS10235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COW1_RS10255 PF02777 Iron/manganese superoxide dismutases, C-terminal domain COW1_RS10255 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain COW1_RS10260 PF02896 PEP-utilising enzyme, TIM barrel domain COW1_RS10260 PF00391 PEP-utilising enzyme, mobile domain COW1_RS10260 PF05524 PEP-utilising enzyme, N-terminal COW1_RS10290 PF03992 Antibiotic biosynthesis monooxygenase COW1_RS10295 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS10295 PF03707 Bacterial signalling protein N terminal repeat COW1_RS10295 PF00563 EAL domain COW1_RS10315 PF13426 PAS domain COW1_RS10315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COW1_RS10315 PF08447 PAS fold COW1_RS10350 PF01758 Sodium Bile acid symporter family COW1_RS10360 PF01741 Large-conductance mechanosensitive channel, MscL COW1_RS10370 PF01206 Sulfurtransferase TusA COW1_RS10400 PF14855 Pilus-assembly fibrillin subunit, chaperone COW1_RS10405 PF01272 Transcription elongation factor, GreA/GreB, C-term COW1_RS10405 PF03449 Transcription elongation factor, N-terminal COW1_RS10415 PF14760 Rnk N-terminus COW1_RS10415 PF01272 Transcription elongation factor, GreA/GreB, C-term COW1_RS10435 PF01964 Radical SAM ThiC family COW1_RS10435 PF13667 ThiC-associated domain COW1_RS10455 PF00581 Rhodanese-like domain COW1_RS10460 PF02321 Outer membrane efflux protein COW1_RS10470 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) COW1_RS10475 PF03279 Bacterial lipid A biosynthesis acyltransferase COW1_RS10520 PF01063 Amino-transferase class IV COW1_RS10525 PF03710 Glutamate-ammonia ligase adenylyltransferase COW1_RS10525 PF08335 GlnD PII-uridylyltransferase COW1_RS10535 PF00437 Type II/IV secretion system protein COW1_RS10540 PF08281 Sigma-70, region 4 COW1_RS10540 PF04542 Sigma-70 region 2 COW1_RS10550 PF00118 TCP-1/cpn60 chaperonin family COW1_RS10555 PF00166 Chaperonin 10 Kd subunit COW1_RS10560 PF04186 FxsA cytoplasmic membrane protein COW1_RS10565 PF03091 CutA1 divalent ion tolerance protein COW1_RS10570 PF02683 Cytochrome C biogenesis protein transmembrane region COW1_RS10570 PF11412 Disulphide bond corrector protein DsbC COW1_RS10575 PF01541 GIY-YIG catalytic domain COW1_RS10580 PF02954 Bacterial regulatory protein, Fis family COW1_RS10580 PF00158 Sigma-54 interaction domain COW1_RS10580 PF00072 Response regulator receiver domain COW1_RS10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS10585 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS10585 PF01627 Hpt domain COW1_RS10585 PF00672 HAMP domain COW1_RS10585 PF00072 Response regulator receiver domain COW1_RS10595 PF01370 NAD dependent epimerase/dehydratase family COW1_RS10600 PF16363 GDP-mannose 4,6 dehydratase COW1_RS10605 PF00953 Glycosyl transferase family 4 COW1_RS10610 PF09721 Transmembrane exosortase (Exosortase_EpsH) COW1_RS10645 PF13439 Glycosyltransferase Family 4 COW1_RS10645 PF00534 Glycosyl transferases group 1 COW1_RS10650 PF00534 Glycosyl transferases group 1 COW1_RS10650 PF13439 Glycosyltransferase Family 4 COW1_RS10655 PF00132 Bacterial transferase hexapeptide (six repeats) COW1_RS10700 PF16363 GDP-mannose 4,6 dehydratase COW1_RS10705 PF04321 RmlD substrate binding domain COW1_RS10710 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase COW1_RS10715 PF00483 Nucleotidyl transferase COW1_RS10740 PF14306 PUA-like domain COW1_RS10740 PF01747 ATP-sulfurylase COW1_RS10765 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain COW1_RS10765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III COW1_RS10765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I COW1_RS10765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II COW1_RS10795 PF01555 DNA methylase COW1_RS10820 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system COW1_RS10920 PF09722 Protein of unknown function (DUF2384) COW1_RS10935 PF01883 Iron-sulfur cluster assembly protein COW1_RS10935 PF10609 NUBPL iron-transfer P-loop NTPase COW1_RS10965 PF00589 Phage integrase family COW1_RS10975 PF04362 Bacterial Fe(2+) trafficking COW1_RS10980 PF14815 NUDIX domain COW1_RS10980 PF00730 HhH-GPD superfamily base excision DNA repair protein COW1_RS10980 PF00633 Helix-hairpin-helix motif COW1_RS10980 PF10576 Iron-sulfur binding domain of endonuclease III COW1_RS10985 PF05170 AsmA family COW1_RS10995 PF00437 Type II/IV secretion system protein COW1_RS10995 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain COW1_RS11020 PF00501 AMP-binding enzyme COW1_RS11030 PF05690 Thiazole biosynthesis protein ThiG COW1_RS11035 PF01544 CorA-like Mg2+ transporter protein COW1_RS11040 PF12794 Mechanosensitive ion channel inner membrane domain 1 COW1_RS11040 PF12795 Mechanosensitive ion channel porin domain COW1_RS11040 PF00924 Mechanosensitive ion channel COW1_RS11045 PF02390 Putative methyltransferase COW1_RS11050 PF00485 Phosphoribulokinase / Uridine kinase family COW1_RS11060 PF00248 Aldo/keto reductase family COW1_RS11070 PF02628 Cytochrome oxidase assembly protein COW1_RS11105 PF02954 Bacterial regulatory protein, Fis family COW1_RS11105 PF00158 Sigma-54 interaction domain COW1_RS11105 PF00072 Response regulator receiver domain COW1_RS11110 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS11110 PF00989 PAS fold COW1_RS11110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS11115 PF00873 AcrB/AcrD/AcrF family COW1_RS11145 PF00403 Heavy-metal-associated domain COW1_RS11150 PF03475 3-alpha domain COW1_RS11150 PF03473 MOSC domain COW1_RS11160 PF00478 IMP dehydrogenase / GMP reductase domain COW1_RS11160 PF00571 CBS domain COW1_RS11180 PF05275 Copper resistance protein B precursor (CopB) COW1_RS11185 PF07731 Multicopper oxidase COW1_RS11185 PF07732 Multicopper oxidase COW1_RS11185 PF00394 Multicopper oxidase COW1_RS11190 PF01545 Cation efflux family COW1_RS11190 PF16916 Dimerisation domain of Zinc Transporter COW1_RS11215 PF00892 EamA-like transporter family COW1_RS11250 PF00873 AcrB/AcrD/AcrF family COW1_RS11255 PF00529 HlyD membrane-fusion protein of T1SS COW1_RS11255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COW1_RS11270 PF01259 SAICAR synthetase COW1_RS11275 PF00731 AIR carboxylase COW1_RS11280 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain COW1_RS11280 PF02222 ATP-grasp domain COW1_RS11285 PF08534 Redoxin COW1_RS11285 PF00462 Glutaredoxin COW1_RS11290 PF07992 Pyridine nucleotide-disulphide oxidoreductase COW1_RS11290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain COW1_RS11295 PF03466 LysR substrate binding domain COW1_RS11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COW1_RS11300 PF00563 EAL domain COW1_RS11300 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS11300 PF03707 Bacterial signalling protein N terminal repeat COW1_RS11305 PF05175 Methyltransferase small domain COW1_RS11315 PF08406 CbbQ/NirQ/NorQ C-terminal COW1_RS11315 PF07728 AAA domain (dynein-related subfamily) COW1_RS11320 PF00101 Ribulose bisphosphate carboxylase, small chain COW1_RS11325 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain COW1_RS11325 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain COW1_RS11330 PF12849 PBP superfamily domain COW1_RS11335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain COW1_RS11335 PF01568 Molydopterin dinucleotide binding domain COW1_RS11335 PF00384 Molybdopterin oxidoreductase COW1_RS11340 PF13247 4Fe-4S dicluster domain COW1_RS11340 PF12800 4Fe-4S binding domain COW1_RS11345 PF04976 DMSO reductase anchor subunit (DmsC) COW1_RS11350 PF06463 Molybdenum Cofactor Synthesis C COW1_RS11350 PF04055 Radical SAM superfamily COW1_RS11355 PF01680 SOR/SNZ family COW1_RS11360 PF01174 SNO glutamine amidotransferase family COW1_RS11365 PF02036 SCP-2 sterol transfer family COW1_RS11385 PF01136 Peptidase family U32 COW1_RS11390 PF01136 Peptidase family U32 COW1_RS11395 PF16199 Radical_SAM C-terminal domain COW1_RS11395 PF04055 Radical SAM superfamily COW1_RS11405 PF00092 von Willebrand factor type A domain COW1_RS11420 PF08406 CbbQ/NirQ/NorQ C-terminal COW1_RS11420 PF07728 AAA domain (dynein-related subfamily) COW1_RS11430 PF00510 Cytochrome c oxidase subunit III COW1_RS11435 PF00115 Cytochrome C and Quinol oxidase polypeptide I COW1_RS11440 PF00034 Cytochrome c COW1_RS11445 PF00027 Cyclic nucleotide-binding domain COW1_RS11445 PF13545 Crp-like helix-turn-helix domain COW1_RS11450 PF02142 MGS-like domain COW1_RS11450 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain COW1_RS11450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain COW1_RS11460 PF04055 Radical SAM superfamily COW1_RS11460 PF13186 Iron-sulfur cluster-binding domain COW1_RS11465 PF17805 AsnC-like ligand binding domain COW1_RS11470 PF17805 AsnC-like ligand binding domain COW1_RS11470 PF13404 AsnC-type helix-turn-helix domain COW1_RS11475 PF17805 AsnC-like ligand binding domain COW1_RS11480 PF13404 AsnC-type helix-turn-helix domain COW1_RS11480 PF17805 AsnC-like ligand binding domain COW1_RS11490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COW1_RS11495 PF10414 Sirohaem synthase dimerisation region COW1_RS11495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases COW1_RS11500 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COW1_RS11505 PF01925 Sulfite exporter TauE/SafE COW1_RS11510 PF00171 Aldehyde dehydrogenase family COW1_RS11515 PF10145 Phage-related minor tail protein COW1_RS11515 PF01464 Transglycosylase SLT domain COW1_RS11515 PF01551 Peptidase family M23 COW1_RS11530 PF03334 Na+/H+ antiporter subunit COW1_RS11545 PF00361 Proton-conducting membrane transporter COW1_RS11550 PF00361 Proton-conducting membrane transporter COW1_RS11555 PF00361 Proton-conducting membrane transporter COW1_RS11565 PF01743 Poly A polymerase head domain COW1_RS11565 PF01966 HD domain COW1_RS11565 PF12627 Probable RNA and SrmB- binding site of polymerase A COW1_RS11575 PF02673 Bacitracin resistance protein BacA COW1_RS11585 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) COW1_RS11590 PF02152 Dihydroneopterin aldolase COW1_RS11595 PF02660 Glycerol-3-phosphate acyltransferase COW1_RS11600 PF00814 Glycoprotease family COW1_RS11605 PF01165 Ribosomal protein S21 COW1_RS11610 PF09424 Yqey-like protein COW1_RS11615 PF08275 DNA primase catalytic core, N-terminal domain COW1_RS11615 PF01807 CHC2 zinc finger COW1_RS11615 PF13662 Toprim domain COW1_RS11615 PF08278 DNA primase DnaG DnaB-binding COW1_RS11615 PF10410 DnaB-helicase binding domain of primase COW1_RS11620 PF04542 Sigma-70 region 2 COW1_RS11620 PF00140 Sigma-70 factor, region 1.2 COW1_RS11620 PF04546 Sigma-70, non-essential region COW1_RS11620 PF03979 Sigma-70 factor, region 1.1 COW1_RS11620 PF04545 Sigma-70, region 4 COW1_RS11620 PF04539 Sigma-70 region 3 COW1_RS11625 PF01810 LysE type translocator COW1_RS11635 PF09722 Protein of unknown function (DUF2384) COW1_RS11640 PF02600 Disulfide bond formation protein DsbB COW1_RS11645 PF05573 NosL COW1_RS11650 PF12679 ABC-2 family transporter protein COW1_RS11655 PF00005 ABC transporter COW1_RS11660 PF05048 Periplasmic copper-binding protein (NosD) COW1_RS11665 PF18793 Nitrous oxide reductase propeller repeat 2 COW1_RS11665 PF18764 Nitrous oxide reductase propeller repeat COW1_RS11665 PF00116 Cytochrome C oxidase subunit II, periplasmic domain COW1_RS11670 PF12801 4Fe-4S binding domain COW1_RS11670 PF04205 FMN-binding domain COW1_RS11675 PF02607 B12 binding domain COW1_RS11675 PF00809 Pterin binding enzyme COW1_RS11675 PF02574 Homocysteine S-methyltransferase COW1_RS11675 PF02310 B12 binding domain COW1_RS11675 PF02965 Vitamin B12 dependent methionine synthase, activation domain COW1_RS11695 PF00313 'Cold-shock' DNA-binding domain COW1_RS11710 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain COW1_RS11710 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase COW1_RS11715 PF01389 OmpA-like transmembrane domain COW1_RS11715 PF00691 OmpA family COW1_RS11720 PF01541 GIY-YIG catalytic domain COW1_RS11730 PF00072 Response regulator receiver domain COW1_RS11735 PF05230 MASE2 domain COW1_RS11735 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS11770 PF00994 Probable molybdopterin binding domain COW1_RS11780 PF00072 Response regulator receiver domain COW1_RS11785 PF00581 Rhodanese-like domain COW1_RS11800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS11805 PF00486 Transcriptional regulatory protein, C terminal COW1_RS11805 PF00072 Response regulator receiver domain COW1_RS11815 PF00005 ABC transporter COW1_RS11820 PF01061 ABC-2 type transporter COW1_RS11835 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase COW1_RS11835 PF12801 4Fe-4S binding domain COW1_RS11835 PF13746 4Fe-4S dicluster domain COW1_RS11840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COW1_RS11840 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP COW1_RS11855 PF00115 Cytochrome C and Quinol oxidase polypeptide I COW1_RS11860 PF13545 Crp-like helix-turn-helix domain COW1_RS11860 PF00027 Cyclic nucleotide-binding domain COW1_RS11865 PF00475 Imidazoleglycerol-phosphate dehydratase COW1_RS11870 PF00117 Glutamine amidotransferase class-I COW1_RS11875 PF00977 Histidine biosynthesis protein COW1_RS11880 PF00977 Histidine biosynthesis protein COW1_RS11885 PF01502 Phosphoribosyl-AMP cyclohydrolase COW1_RS11890 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase COW1_RS11895 PF02416 mttA/Hcf106 family COW1_RS11900 PF02416 mttA/Hcf106 family COW1_RS11905 PF00902 Sec-independent protein translocase protein (TatC) COW1_RS11920 PF13409 Glutathione S-transferase, N-terminal domain COW1_RS11925 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS11935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COW1_RS11935 PF00205 Thiamine pyrophosphate enzyme, central domain COW1_RS11935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COW1_RS11940 PF01323 DSBA-like thioredoxin domain COW1_RS11945 PF01578 Cytochrome C assembly protein COW1_RS11950 PF05140 ResB-like family COW1_RS11955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COW1_RS11960 PF01926 50S ribosome-binding GTPase COW1_RS11965 PF00476 DNA polymerase family A COW1_RS11965 PF01367 5'-3' exonuclease, C-terminal SAM fold COW1_RS11965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain COW1_RS11965 PF01612 3'-5' exonuclease COW1_RS11970 PF03641 Possible lysine decarboxylase COW1_RS11985 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component COW1_RS11990 PF03707 Bacterial signalling protein N terminal repeat COW1_RS11990 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS11990 PF00563 EAL domain COW1_RS11995 PF01751 Toprim domain COW1_RS11995 PF01131 DNA topoisomerase COW1_RS11995 PF13368 Topoisomerase C-terminal repeat COW1_RS12000 PF04361 Protein of unknown function (DUF494) COW1_RS12005 PF17782 DprA winged helix domain COW1_RS12005 PF02481 DNA recombination-mediator protein A COW1_RS12015 PF01327 Polypeptide deformylase COW1_RS12020 PF02911 Formyl transferase, C-terminal domain COW1_RS12020 PF00551 Formyl transferase COW1_RS12025 PF01029 NusB family COW1_RS12025 PF01189 16S rRNA methyltransferase RsmB/F COW1_RS12035 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS12035 PF00672 HAMP domain COW1_RS12035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS12035 PF00989 PAS fold COW1_RS12040 PF02954 Bacterial regulatory protein, Fis family COW1_RS12040 PF00072 Response regulator receiver domain COW1_RS12040 PF00158 Sigma-54 interaction domain COW1_RS12045 PF02254 TrkA-N domain COW1_RS12045 PF02080 TrkA-C domain COW1_RS12050 PF02386 Cation transport protein COW1_RS12060 PF07690 Major Facilitator Superfamily COW1_RS12065 PF02080 TrkA-C domain COW1_RS12065 PF00999 Sodium/hydrogen exchanger family COW1_RS12065 PF03471 Transporter associated domain COW1_RS12080 PF04343 Protein of unknown function, DUF488 COW1_RS12090 PF01171 PP-loop family COW1_RS12100 PF13686 DsrE/DsrF/DrsH-like family COW1_RS12105 PF00561 alpha/beta hydrolase fold COW1_RS12110 PF02580 D-Tyr-tRNA(Tyr) deacylase COW1_RS12115 PF00570 HRDC domain COW1_RS12115 PF01612 3'-5' exonuclease COW1_RS12125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain COW1_RS12125 PF07992 Pyridine nucleotide-disulphide oxidoreductase COW1_RS12130 PF01432 Peptidase family M3 COW1_RS12135 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase COW1_RS12145 PF00111 2Fe-2S iron-sulfur cluster binding domain COW1_RS12145 PF00175 Oxidoreductase NAD-binding domain COW1_RS12145 PF00970 Oxidoreductase FAD-binding domain COW1_RS12160 PF02602 Uroporphyrinogen-III synthase HemD COW1_RS12165 PF03900 Porphobilinogen deaminase, C-terminal domain COW1_RS12165 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain COW1_RS12175 PF00072 Response regulator receiver domain COW1_RS12175 PF04397 LytTr DNA-binding domain COW1_RS12180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS12180 PF06580 Histidine kinase COW1_RS12185 PF14698 Argininosuccinate lyase C-terminal COW1_RS12185 PF00206 Lyase COW1_RS12190 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS12190 PF00563 EAL domain COW1_RS12190 PF08448 PAS fold COW1_RS12210 PF12633 Adenylate cyclase NT domain COW1_RS12210 PF01295 Adenylate cyclase, class-I COW1_RS12235 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP COW1_RS12235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COW1_RS12250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain COW1_RS12250 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain COW1_RS12255 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS12255 PF08448 PAS fold COW1_RS12260 PF01678 Diaminopimelate epimerase COW1_RS12270 PF00589 Phage integrase family COW1_RS12270 PF02899 Phage integrase, N-terminal SAM-like domain COW1_RS12275 PF00227 Proteasome subunit COW1_RS12280 PF00004 ATPase family associated with various cellular activities (AAA) COW1_RS12280 PF10431 C-terminal, D2-small domain, of ClpB protein COW1_RS12280 PF07724 AAA domain (Cdc48 subfamily) COW1_RS12295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COW1_RS12295 PF03466 LysR substrate binding domain COW1_RS12305 PF01925 Sulfite exporter TauE/SafE COW1_RS12310 PF01209 ubiE/COQ5 methyltransferase family COW1_RS12325 PF03109 ABC1 family COW1_RS12330 PF01965 DJ-1/PfpI family COW1_RS12335 PF04748 Divergent polysaccharide deacetylase COW1_RS12340 PF03572 Peptidase family S41 COW1_RS12340 PF13180 PDZ domain COW1_RS12345 PF01551 Peptidase family M23 COW1_RS12350 PF06415 BPG-independent PGAM N-terminus (iPGM_N) COW1_RS12350 PF01676 Metalloenzyme superfamily COW1_RS12360 PF00581 Rhodanese-like domain COW1_RS12365 PF00462 Glutaredoxin COW1_RS12370 PF02556 Preprotein translocase subunit SecB COW1_RS12375 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus COW1_RS12375 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus COW1_RS12385 PF13335 Magnesium chelatase, subunit ChlI C-terminal COW1_RS12385 PF01078 Magnesium chelatase, subunit ChlI COW1_RS12390 PF04380 Membrane fusogenic activity COW1_RS12395 PF00543 Nitrogen regulatory protein P-II COW1_RS12400 PF00909 Ammonium Transporter Family COW1_RS12410 PF01300 Telomere recombination COW1_RS12415 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS12415 PF08448 PAS fold COW1_RS12420 PF01218 Coproporphyrinogen III oxidase COW1_RS12425 PF00301 Rubredoxin COW1_RS12440 PF00490 Delta-aminolevulinic acid dehydratase COW1_RS12445 PF01488 Shikimate / quinate 5-dehydrogenase COW1_RS12445 PF08501 Shikimate dehydrogenase substrate binding domain COW1_RS12445 PF18317 Shikimate 5'-dehydrogenase C-terminal domain COW1_RS12460 PF07715 TonB-dependent Receptor Plug Domain COW1_RS12460 PF00593 TonB dependent receptor COW1_RS12470 PF00132 Bacterial transferase hexapeptide (six repeats) COW1_RS12475 PF00005 ABC transporter COW1_RS12475 PF12848 ABC transporter COW1_RS12500 PF00862 Sucrose synthase COW1_RS12500 PF00534 Glycosyl transferases group 1 COW1_RS12505 PF00862 Sucrose synthase COW1_RS12505 PF00534 Glycosyl transferases group 1 COW1_RS12510 PF00294 pfkB family carbohydrate kinase COW1_RS12525 PF01047 MarR family COW1_RS12555 PF01380 SIS domain COW1_RS12570 PF01380 SIS domain COW1_RS12575 PF12804 MobA-like NTP transferase domain COW1_RS12575 PF00132 Bacterial transferase hexapeptide (six repeats) COW1_RS12580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase COW1_RS12585 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain COW1_RS12585 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain COW1_RS12590 PF02874 ATP synthase alpha/beta family, beta-barrel domain COW1_RS12590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COW1_RS12595 PF00231 ATP synthase COW1_RS12600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COW1_RS12600 PF02874 ATP synthase alpha/beta family, beta-barrel domain COW1_RS12600 PF00306 ATP synthase alpha/beta chain, C terminal domain COW1_RS12605 PF00213 ATP synthase delta (OSCP) subunit COW1_RS12610 PF00430 ATP synthase B/B' CF(0) COW1_RS12615 PF00137 ATP synthase subunit C COW1_RS12620 PF00119 ATP synthase A chain COW1_RS12630 PF02195 ParB-like nuclease domain COW1_RS12630 PF17762 HTH domain found in ParB protein COW1_RS12635 PF13614 AAA domain COW1_RS12640 PF02527 rRNA small subunit methyltransferase G COW1_RS12645 PF01134 Glucose inhibited division protein A COW1_RS12645 PF13932 GidA associated domain COW1_RS12650 PF12833 Helix-turn-helix domain COW1_RS12650 PF02311 AraC-like ligand binding domain COW1_RS12660 PF17863 AAA lid domain COW1_RS12660 PF07726 ATPase family associated with various cellular activities (AAA) COW1_RS12670 PF13559 Domain of unknown function (DUF4129) COW1_RS12670 PF11992 Domain of unknown function (DUF3488) COW1_RS12670 PF01841 Transglutaminase-like superfamily COW1_RS12675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase COW1_RS12690 PF01926 50S ribosome-binding GTPase COW1_RS12690 PF12631 MnmE helical domain COW1_RS12690 PF10396 GTP-binding protein TrmE N-terminus COW1_RS12695 PF02096 60Kd inner membrane protein COW1_RS12695 PF14849 YidC periplasmic domain COW1_RS12700 PF01809 Putative membrane protein insertion efficiency factor COW1_RS12705 PF00825 Ribonuclease P COW1_RS12710 PF00468 Ribosomal protein L34 COW1_RS12715 PF00308 Bacterial dnaA protein COW1_RS12715 PF08299 Bacterial dnaA protein helix-turn-helix COW1_RS12715 PF11638 DnaA N-terminal domain COW1_RS12720 PF02767 DNA polymerase III beta subunit, central domain COW1_RS12720 PF00712 DNA polymerase III beta subunit, N-terminal domain COW1_RS12720 PF02768 DNA polymerase III beta subunit, C-terminal domain COW1_RS12725 PF02463 RecF/RecN/SMC N terminal domain COW1_RS12730 PF18053 DNA gyrase B subunit insert domain COW1_RS12730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS12730 PF00204 DNA gyrase B COW1_RS12730 PF00986 DNA gyrase B subunit, carboxyl terminus COW1_RS12730 PF01751 Toprim domain COW1_RS12750 PF05746 DALR anticodon binding domain COW1_RS12750 PF02092 Glycyl-tRNA synthetase beta subunit COW1_RS12755 PF02091 Glycyl-tRNA synthetase alpha subunit COW1_RS12775 PF16916 Dimerisation domain of Zinc Transporter COW1_RS12775 PF01545 Cation efflux family COW1_RS12780 PF00120 Glutamine synthetase, catalytic domain COW1_RS12780 PF03951 Glutamine synthetase, beta-Grasp domain COW1_RS12795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS12795 PF00989 PAS fold COW1_RS12795 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS12800 PF02954 Bacterial regulatory protein, Fis family COW1_RS12800 PF00158 Sigma-54 interaction domain COW1_RS12800 PF00072 Response regulator receiver domain COW1_RS12830 PF07963 Prokaryotic N-terminal methylation motif COW1_RS12835 PF00482 Type II secretion system (T2SS), protein F COW1_RS12840 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain COW1_RS12840 PF00437 Type II/IV secretion system protein COW1_RS12855 PF03958 Bacterial type II/III secretion system short domain COW1_RS12855 PF00263 Bacterial type II and III secretion system protein COW1_RS12875 PF01180 Dihydroorotate dehydrogenase COW1_RS12880 PF00588 SpoU rRNA Methylase family COW1_RS12890 PF10263 SprT-like family COW1_RS12890 PF17283 SprT-like zinc ribbon domain COW1_RS12900 PF00580 UvrD/REP helicase N-terminal domain COW1_RS12900 PF13361 UvrD-like helicase C-terminal domain COW1_RS12905 PF01209 ubiE/COQ5 methyltransferase family COW1_RS12910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COW1_RS12930 PF00873 AcrB/AcrD/AcrF family COW1_RS12935 PF13533 Biotin-lipoyl like COW1_RS12940 PF16998 17 kDa outer membrane surface antigen COW1_RS12940 PF05433 Glycine zipper 2TM domain COW1_RS12950 PF00072 Response regulator receiver domain COW1_RS12950 PF02954 Bacterial regulatory protein, Fis family COW1_RS12950 PF00158 Sigma-54 interaction domain COW1_RS12955 PF04247 Invasion gene expression up-regulator, SirB COW1_RS12970 PF00111 2Fe-2S iron-sulfur cluster binding domain COW1_RS12970 PF00175 Oxidoreductase NAD-binding domain COW1_RS12970 PF00970 Oxidoreductase FAD-binding domain COW1_RS12980 PF03239 Iron permease FTR1 family COW1_RS12990 PF00850 Histone deacetylase domain COW1_RS12995 PF13607 Succinyl-CoA ligase like flavodoxin domain COW1_RS12995 PF13380 CoA binding domain COW1_RS12995 PF00583 Acetyltransferase (GNAT) family COW1_RS13010 PF00005 ABC transporter COW1_RS13010 PF00571 CBS domain COW1_RS13015 PF00877 NlpC/P60 family COW1_RS13020 PF01470 Pyroglutamyl peptidase COW1_RS13030 PF01814 Hemerythrin HHE cation binding domain COW1_RS13040 PF00535 Glycosyl transferase family 2 COW1_RS13050 PF04349 Periplasmic glucan biosynthesis protein, MdoG COW1_RS13070 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 COW1_RS13085 PF01272 Transcription elongation factor, GreA/GreB, C-term COW1_RS13085 PF14760 Rnk N-terminus COW1_RS13090 PF03073 TspO/MBR family COW1_RS13095 PF01645 Conserved region in glutamate synthase COW1_RS13095 PF13187 4Fe-4S dicluster domain COW1_RS13100 PF00583 Acetyltransferase (GNAT) family COW1_RS13105 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase COW1_RS13115 PF13683 Integrase core domain COW1_RS13115 PF13276 HTH-like domain COW1_RS13120 PF13533 Biotin-lipoyl like COW1_RS13125 PF00005 ABC transporter COW1_RS13145 PF13361 UvrD-like helicase C-terminal domain COW1_RS13145 PF00580 UvrD/REP helicase N-terminal domain COW1_RS13155 PF08448 PAS fold COW1_RS13155 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS13155 PF00563 EAL domain COW1_RS13160 PF03480 Bacterial extracellular solute-binding protein, family 7 COW1_RS13165 PF00005 ABC transporter COW1_RS13170 PF03649 Uncharacterised protein family (UPF0014) COW1_RS13175 PF17284 Spermidine synthase tetramerisation domain COW1_RS13180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain COW1_RS13180 PF17810 Arginine decarboxylase helical bundle domain COW1_RS13180 PF17944 Arginine decarboxylase C-terminal helical extension COW1_RS13185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase COW1_RS13185 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase COW1_RS13200 PF07715 TonB-dependent Receptor Plug Domain COW1_RS13200 PF00593 TonB dependent receptor COW1_RS13210 PF00750 tRNA synthetases class I (R) COW1_RS13210 PF05746 DALR anticodon binding domain COW1_RS13210 PF03485 Arginyl tRNA synthetase N terminal domain COW1_RS13215 PF18074 Primosomal protein N C-terminal domain COW1_RS13215 PF18319 PriA DNA helicase Cys-rich region (CRR) domain COW1_RS13215 PF00270 DEAD/DEAH box helicase COW1_RS13215 PF00271 Helicase conserved C-terminal domain COW1_RS13215 PF17764 3′ DNA-binding domain (3′BD) COW1_RS13220 PF02253 Phospholipase A1 COW1_RS13225 PF02233 NAD(P) transhydrogenase beta subunit COW1_RS13230 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch COW1_RS13235 PF05222 Alanine dehydrogenase/PNT, N-terminal domain COW1_RS13235 PF01262 Alanine dehydrogenase/PNT, C-terminal domain COW1_RS13245 PF03881 Fructosamine kinase COW1_RS13255 PF00563 EAL domain COW1_RS13255 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS13255 PF03707 Bacterial signalling protein N terminal repeat COW1_RS13260 PF01208 Uroporphyrinogen decarboxylase (URO-D) COW1_RS13265 PF07992 Pyridine nucleotide-disulphide oxidoreductase COW1_RS13265 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster COW1_RS13270 PF00310 Glutamine amidotransferases class-II COW1_RS13270 PF01493 GXGXG motif COW1_RS13270 PF04898 Glutamate synthase central domain COW1_RS13270 PF01645 Conserved region in glutamate synthase COW1_RS13285 PF01966 HD domain COW1_RS13285 PF13286 Phosphohydrolase-associated domain COW1_RS13290 PF01761 3-dehydroquinate synthase COW1_RS13295 PF01202 Shikimate kinase COW1_RS13300 PF03958 Bacterial type II/III secretion system short domain COW1_RS13300 PF11741 AMIN domain COW1_RS13300 PF07660 Secretin and TonB N terminus short domain COW1_RS13300 PF00263 Bacterial type II and III secretion system protein COW1_RS13305 PF04351 Pilus assembly protein, PilP COW1_RS13315 PF05137 Fimbrial assembly protein (PilN) COW1_RS13320 PF11104 Type IV pilus assembly protein PilM; COW1_RS13325 PF17092 Penicillin-binding protein OB-like domain COW1_RS13325 PF00912 Transglycosylase COW1_RS13325 PF00905 Penicillin binding protein transpeptidase domain COW1_RS13335 PF00390 Malic enzyme, N-terminal domain COW1_RS13335 PF03949 Malic enzyme, NAD binding domain COW1_RS13350 PF01197 Ribosomal protein L31 COW1_RS13360 PF00919 Uncharacterized protein family UPF0004 COW1_RS13360 PF18693 TRAM domain COW1_RS13360 PF04055 Radical SAM superfamily COW1_RS13375 PF06969 HemN C-terminal domain COW1_RS13375 PF04055 Radical SAM superfamily COW1_RS13380 PF01725 Ham1 family COW1_RS13385 PF01138 3' exoribonuclease family, domain 1 COW1_RS13385 PF03725 3' exoribonuclease family, domain 2 COW1_RS13395 PF00069 Protein kinase domain COW1_RS13395 PF03793 PASTA domain COW1_RS13400 PF03755 YicC-like family, N-terminal region COW1_RS13400 PF08340 Domain of unknown function (DUF1732) COW1_RS13405 PF00625 Guanylate kinase COW1_RS13410 PF01192 RNA polymerase Rpb6 COW1_RS13415 PF13291 ACT domain COW1_RS13415 PF04607 Region found in RelA / SpoT proteins COW1_RS13415 PF02824 TGS domain COW1_RS13420 PF01042 Endoribonuclease L-PSP COW1_RS13425 PF00270 DEAD/DEAH box helicase COW1_RS13425 PF00271 Helicase conserved C-terminal domain COW1_RS13425 PF17191 RecG wedge domain COW1_RS13430 PF04345 Chorismate lyase COW1_RS13435 PF01040 UbiA prenyltransferase family COW1_RS13455 PF00156 Phosphoribosyl transferase domain COW1_RS13465 PF06968 Biotin and Thiamin Synthesis associated domain COW1_RS13465 PF04055 Radical SAM superfamily COW1_RS13470 PF00155 Aminotransferase class I and II COW1_RS13475 PF12697 Alpha/beta hydrolase family COW1_RS13480 PF08241 Methyltransferase domain COW1_RS13495 PF02790 Cytochrome C oxidase subunit II, transmembrane domain COW1_RS13495 PF00116 Cytochrome C oxidase subunit II, periplasmic domain COW1_RS13500 PF00115 Cytochrome C and Quinol oxidase polypeptide I COW1_RS13510 PF00510 Cytochrome c oxidase subunit III COW1_RS13520 PF02104 SURF1 family COW1_RS13530 PF01040 UbiA prenyltransferase family COW1_RS13535 PF00115 Cytochrome C and Quinol oxidase polypeptide I COW1_RS13550 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP COW1_RS13550 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COW1_RS13555 PF13746 4Fe-4S dicluster domain COW1_RS13555 PF12801 4Fe-4S binding domain COW1_RS13555 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase COW1_RS13565 PF00403 Heavy-metal-associated domain COW1_RS13625 PF13333 Integrase core domain COW1_RS13625 PF00665 Integrase core domain COW1_RS13625 PF13276 HTH-like domain COW1_RS13645 PF00578 AhpC/TSA family COW1_RS13645 PF10417 C-terminal domain of 1-Cys peroxiredoxin COW1_RS13650 PF01206 Sulfurtransferase TusA COW1_RS13655 PF04143 Sulphur transport COW1_RS13705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS13705 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS13705 PF00989 PAS fold COW1_RS13710 PF02954 Bacterial regulatory protein, Fis family COW1_RS13710 PF00072 Response regulator receiver domain COW1_RS13710 PF00158 Sigma-54 interaction domain COW1_RS13725 PF00484 Carbonic anhydrase COW1_RS13730 PF00313 'Cold-shock' DNA-binding domain COW1_RS13735 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) COW1_RS13755 PF01625 Peptide methionine sulfoxide reductase COW1_RS13765 PF03597 Cytochrome oxidase maturation protein cbb3-type COW1_RS13770 PF04545 Sigma-70, region 4 COW1_RS13770 PF04542 Sigma-70 region 2 COW1_RS13770 PF00140 Sigma-70 factor, region 1.2 COW1_RS13775 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS13775 PF00072 Response regulator receiver domain COW1_RS13780 PF18075 FtsX extracellular domain COW1_RS13785 PF00005 ABC transporter COW1_RS13790 PF00448 SRP54-type protein, GTPase domain COW1_RS13790 PF02881 SRP54-type protein, helical bundle domain COW1_RS13795 PF05193 Peptidase M16 inactive domain COW1_RS13795 PF00675 Insulinase (Peptidase family M16) COW1_RS13800 PF05193 Peptidase M16 inactive domain COW1_RS13800 PF00675 Insulinase (Peptidase family M16) COW1_RS13815 PF01467 Cytidylyltransferase-like COW1_RS13820 PF00037 4Fe-4S binding domain COW1_RS13835 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain COW1_RS13835 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain COW1_RS13835 PF06827 Zinc finger found in FPG and IleRS COW1_RS13840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain COW1_RS13840 PF07992 Pyridine nucleotide-disulphide oxidoreductase COW1_RS13860 PF13732 Domain of unknown function (DUF4162) COW1_RS13860 PF00005 ABC transporter COW1_RS13865 PF05378 Hydantoinase/oxoprolinase N-terminal region COW1_RS13865 PF01968 Hydantoinase/oxoprolinase COW1_RS13870 PF00563 EAL domain COW1_RS13870 PF08668 HDOD domain COW1_RS13880 PF00471 Ribosomal protein L33 COW1_RS13885 PF00830 Ribosomal L28 family COW1_RS13890 PF04002 RadC-like JAB domain COW1_RS13895 PF04127 DNA / pantothenate metabolism flavoprotein COW1_RS13895 PF02441 Flavoprotein COW1_RS13900 PF00692 dUTPase COW1_RS13905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II COW1_RS13905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III COW1_RS13905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I COW1_RS13905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain COW1_RS13910 PF00696 Amino acid kinase family COW1_RS13925 PF00156 Phosphoribosyl transferase domain COW1_RS13930 PF03372 Endonuclease/Exonuclease/phosphatase family COW1_RS13950 PF02594 Uncharacterised ACR, YggU family COG1872 COW1_RS13955 PF02325 YGGT family COW1_RS13960 PF14748 Pyrroline-5-carboxylate reductase dimerisation COW1_RS13960 PF03807 NADP oxidoreductase coenzyme F420-dependent COW1_RS13965 PF01168 Alanine racemase, N-terminal domain COW1_RS13970 PF00437 Type II/IV secretion system protein COW1_RS13975 PF00437 Type II/IV secretion system protein COW1_RS13985 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B COW1_RS13985 PF00970 Oxidoreductase FAD-binding domain COW1_RS13985 PF00175 Oxidoreductase NAD-binding domain COW1_RS13990 PF01979 Amidohydrolase family COW1_RS13995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain COW1_RS13995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain COW1_RS14000 PF00156 Phosphoribosyl transferase domain COW1_RS14005 PF03652 Holliday junction resolvase COW1_RS14010 PF02622 Uncharacterized ACR, COG1678 COW1_RS14030 PF02424 ApbE family COW1_RS14035 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain COW1_RS14035 PF02951 Prokaryotic glutathione synthetase, N-terminal domain COW1_RS14045 PF00072 Response regulator receiver domain COW1_RS14050 PF00072 Response regulator receiver domain COW1_RS14055 PF01584 CheW-like domain COW1_RS14060 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term COW1_RS14060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COW1_RS14065 PF01739 CheR methyltransferase, SAM binding domain COW1_RS14065 PF03705 CheR methyltransferase, all-alpha domain COW1_RS14070 PF00072 Response regulator receiver domain COW1_RS14070 PF01584 CheW-like domain COW1_RS14070 PF02895 Signal transducing histidine kinase, homodimeric domain COW1_RS14070 PF01627 Hpt domain COW1_RS14070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS14075 PF00072 Response regulator receiver domain COW1_RS14075 PF01339 CheB methylesterase COW1_RS14085 PF00939 Sodium:sulfate symporter transmembrane region COW1_RS14095 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS14095 PF13188 PAS domain COW1_RS14095 PF00072 Response regulator receiver domain COW1_RS14095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS14095 PF08448 PAS fold COW1_RS14100 PF00158 Sigma-54 interaction domain COW1_RS14100 PF02954 Bacterial regulatory protein, Fis family COW1_RS14100 PF00072 Response regulator receiver domain COW1_RS14110 PF04452 RNA methyltransferase COW1_RS14115 PF02219 Methylenetetrahydrofolate reductase COW1_RS14120 PF05221 S-adenosyl-L-homocysteine hydrolase COW1_RS14120 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain COW1_RS14125 PF00438 S-adenosylmethionine synthetase, N-terminal domain COW1_RS14125 PF02773 S-adenosylmethionine synthetase, C-terminal domain COW1_RS14125 PF02772 S-adenosylmethionine synthetase, central domain COW1_RS14140 PF02779 Transketolase, pyrimidine binding domain COW1_RS14140 PF02780 Transketolase, C-terminal domain COW1_RS14140 PF00456 Transketolase, thiamine diphosphate binding domain COW1_RS14145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain COW1_RS14145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain COW1_RS14150 PF00162 Phosphoglycerate kinase COW1_RS14155 PF00224 Pyruvate kinase, barrel domain COW1_RS14155 PF02887 Pyruvate kinase, alpha/beta domain COW1_RS14160 PF01116 Fructose-bisphosphate aldolase class-II COW1_RS14175 PF00999 Sodium/hydrogen exchanger family COW1_RS14185 PF01636 Phosphotransferase enzyme family COW1_RS14190 PF00005 ABC transporter COW1_RS14190 PF03459 TOBE domain COW1_RS14195 PF00528 Binding-protein-dependent transport system inner membrane component COW1_RS14210 PF01740 STAS domain COW1_RS14210 PF00916 Sulfate permease family COW1_RS14220 PF01966 HD domain COW1_RS14220 PF11871 Domain of unknown function (DUF3391) COW1_RS14240 PF00011 Hsp20/alpha crystallin family COW1_RS14250 PF00226 DnaJ domain COW1_RS14250 PF01556 DnaJ C terminal domain COW1_RS14255 PF00011 Hsp20/alpha crystallin family COW1_RS14260 PF03477 ATP cone domain COW1_RS14260 PF02867 Ribonucleotide reductase, barrel domain COW1_RS14260 PF00317 Ribonucleotide reductase, all-alpha domain COW1_RS14285 PF13401 AAA domain COW1_RS14285 PF01471 Putative peptidoglycan binding domain COW1_RS14310 PF00294 pfkB family carbohydrate kinase COW1_RS14325 PF04493 Endonuclease V COW1_RS14335 PF05099 Tellurite resistance protein TerB COW1_RS14335 PF00226 DnaJ domain COW1_RS14350 PF00834 Ribulose-phosphate 3 epimerase family COW1_RS14355 PF13419 Haloacid dehalogenase-like hydrolase COW1_RS14360 PF04715 Anthranilate synthase component I, N terminal region COW1_RS14360 PF00425 chorismate binding enzyme COW1_RS14365 PF00117 Glutamine amidotransferase class-I COW1_RS14370 PF00591 Glycosyl transferase family, a/b domain COW1_RS14370 PF02885 Glycosyl transferase family, helical bundle domain COW1_RS14375 PF00218 Indole-3-glycerol phosphate synthase COW1_RS14380 PF00027 Cyclic nucleotide-binding domain COW1_RS14380 PF13545 Crp-like helix-turn-helix domain COW1_RS14385 PF02566 OsmC-like protein COW1_RS14395 PF02675 S-adenosylmethionine decarboxylase COW1_RS14400 PF03232 Ubiquinone biosynthesis protein COQ7 COW1_RS14410 PF00572 Ribosomal protein L13 COW1_RS14415 PF00380 Ribosomal protein S9/S16 COW1_RS14425 PF03922 OmpW family COW1_RS14430 PF13609 Gram-negative porin COW1_RS14435 PF02754 Cysteine-rich domain COW1_RS14435 PF13183 4Fe-4S dicluster domain COW1_RS14440 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) COW1_RS14450 PF00585 C-terminal regulatory domain of Threonine dehydratase COW1_RS14450 PF00291 Pyridoxal-phosphate dependent enzyme COW1_RS14465 PF01812 5-formyltetrahydrofolate cyclo-ligase family COW1_RS14475 PF05164 Cell division protein ZapA COW1_RS14485 PF03695 Uncharacterised protein family (UPF0149) COW1_RS14490 PF00557 Metallopeptidase family M24 COW1_RS14490 PF05195 Aminopeptidase P, N-terminal domain COW1_RS14495 PF01494 FAD binding domain COW1_RS14500 PF01494 FAD binding domain COW1_RS14510 PF01571 Aminomethyltransferase folate-binding domain COW1_RS14510 PF08669 Glycine cleavage T-protein C-terminal barrel domain COW1_RS14515 PF01597 Glycine cleavage H-protein COW1_RS14520 PF02347 Glycine cleavage system P-protein COW1_RS14525 PF08534 Redoxin COW1_RS14530 PF02347 Glycine cleavage system P-protein COW1_RS14535 PF01219 Prokaryotic diacylglycerol kinase COW1_RS14540 PF00294 pfkB family carbohydrate kinase COW1_RS14545 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS14545 PF00563 EAL domain COW1_RS14545 PF03707 Bacterial signalling protein N terminal repeat COW1_RS14555 PF00440 Bacterial regulatory proteins, tetR family COW1_RS14555 PF13977 BetI-type transcriptional repressor, C-terminal COW1_RS14560 PF01206 Sulfurtransferase TusA COW1_RS14565 PF08274 PhnA Zinc-Ribbon COW1_RS14565 PF03831 PhnA domain COW1_RS14570 PF03190 Protein of unknown function, DUF255 COW1_RS14575 PF00535 Glycosyl transferase family 2 COW1_RS14585 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase COW1_RS14595 PF10672 S-adenosylmethionine-dependent methyltransferase COW1_RS14595 PF17785 PUA-like domain COW1_RS14600 PF01790 Prolipoprotein diacylglyceryl transferase COW1_RS14605 PF00303 Thymidylate synthase COW1_RS14610 PF00186 Dihydrofolate reductase COW1_RS14620 PF00149 Calcineurin-like phosphoesterase COW1_RS14625 PF04379 ApaG domain COW1_RS14630 PF02685 Glucokinase COW1_RS14635 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase COW1_RS14650 PF00582 Universal stress protein family COW1_RS14660 PF00398 Ribosomal RNA adenine dimethylase COW1_RS14665 PF04166 Pyridoxal phosphate biosynthetic protein PdxA COW1_RS14670 PF09312 SurA N-terminal domain COW1_RS14670 PF00639 PPIC-type PPIASE domain COW1_RS14675 PF04453 LPS transport system D COW1_RS14675 PF03968 OstA-like protein COW1_RS14685 PF00873 AcrB/AcrD/AcrF family COW1_RS14690 PF01636 Phosphotransferase enzyme family COW1_RS14695 PF00483 Nucleotidyl transferase COW1_RS14720 PF00873 AcrB/AcrD/AcrF family COW1_RS14725 PF13533 Biotin-lipoyl like COW1_RS14750 PF04055 Radical SAM superfamily COW1_RS14755 PF03099 Biotin/lipoate A/B protein ligase family COW1_RS14760 PF04359 Protein of unknown function (DUF493) COW1_RS14780 PF00873 AcrB/AcrD/AcrF family COW1_RS14785 PF01063 Amino-transferase class IV COW1_RS14790 PF00768 D-alanyl-D-alanine carboxypeptidase COW1_RS14790 PF07943 Penicillin-binding protein 5, C-terminal domain COW1_RS14795 PF03330 Lytic transglycolase COW1_RS14795 PF05036 Sporulation related domain COW1_RS14800 PF13406 Transglycosylase SLT domain COW1_RS14805 PF01098 Cell cycle protein COW1_RS14810 PF03717 Penicillin-binding Protein dimerisation domain COW1_RS14810 PF00905 Penicillin binding protein transpeptidase domain COW1_RS14815 PF04093 rod shape-determining protein MreD COW1_RS14820 PF04085 rod shape-determining protein MreC COW1_RS14830 PF02686 Glu-tRNAGln amidotransferase C subunit COW1_RS14835 PF01425 Amidase COW1_RS14840 PF02637 GatB domain COW1_RS14840 PF02934 GatB/GatE catalytic domain COW1_RS14850 PF05166 YcgL domain COW1_RS14850 PF05116 Sucrose-6F-phosphate phosphohydrolase COW1_RS14855 PF09997 Predicted membrane protein (DUF2238) COW1_RS14865 PF00899 ThiF family COW1_RS14875 PF17827 PrmC N-terminal domain COW1_RS14875 PF13847 Methyltransferase domain COW1_RS14880 PF03462 PCRF domain COW1_RS14880 PF00472 RF-1 domain COW1_RS14885 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain COW1_RS14885 PF01488 Shikimate / quinate 5-dehydrogenase COW1_RS14885 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain COW1_RS14895 PF03550 Outer membrane lipoprotein LolB COW1_RS14900 PF08544 GHMP kinases C terminal COW1_RS14900 PF00288 GHMP kinases N terminal domain COW1_RS14910 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase COW1_RS14910 PF14572 Phosphoribosyl synthetase-associated domain COW1_RS14915 PF14693 Ribosomal protein TL5, C-terminal domain COW1_RS14915 PF01386 Ribosomal L25p family COW1_RS14920 PF01195 Peptidyl-tRNA hydrolase COW1_RS14925 PF01926 50S ribosome-binding GTPase COW1_RS14925 PF06071 Protein of unknown function (DUF933) COW1_RS15045 PF00589 Phage integrase family COW1_RS15045 PF13356 Arm DNA-binding domain COW1_RS15050 PF00266 Aminotransferase class-V COW1_RS15060 PF08241 Methyltransferase domain COW1_RS15070 PF00873 AcrB/AcrD/AcrF family COW1_RS15075 PF02028 BCCT, betaine/carnitine/choline family transporter COW1_RS15080 PF13344 Haloacid dehalogenase-like hydrolase COW1_RS15130 PF01930 Domain of unknown function DUF83 COW1_RS15130 PF01867 CRISPR associated protein Cas1 COW1_RS15135 PF09827 CRISPR associated protein Cas2 COW1_RS15140 PF00072 Response regulator receiver domain COW1_RS15140 PF02954 Bacterial regulatory protein, Fis family COW1_RS15140 PF00158 Sigma-54 interaction domain COW1_RS15150 PF00115 Cytochrome C and Quinol oxidase polypeptide I COW1_RS15175 PF03190 Protein of unknown function, DUF255 COW1_RS15185 PF05127 Helicase COW1_RS15185 PF17176 tRNA-binding domain COW1_RS15185 PF13718 GNAT acetyltransferase 2 COW1_RS15185 PF08351 Domain of unknown function (DUF1726) COW1_RS15195 PF11700 Vacuole effluxer Atg22 like COW1_RS15205 PF04408 Helicase associated domain (HA2) COW1_RS15205 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold COW1_RS15205 PF00270 DEAD/DEAH box helicase COW1_RS15205 PF00271 Helicase conserved C-terminal domain COW1_RS15205 PF11898 Domain of unknown function (DUF3418) COW1_RS15220 PF02801 Beta-ketoacyl synthase, C-terminal domain COW1_RS15220 PF00109 Beta-ketoacyl synthase, N-terminal domain COW1_RS15225 PF07977 FabA-like domain COW1_RS15230 PF00072 Response regulator receiver domain COW1_RS15230 PF00486 Transcriptional regulatory protein, C terminal COW1_RS15235 PF00535 Glycosyl transferase family 2 COW1_RS15255 PF03631 Virulence factor BrkB COW1_RS15265 PF00578 AhpC/TSA family COW1_RS15275 PF00679 Elongation factor G C-terminus COW1_RS15275 PF03144 Elongation factor Tu domain 2 COW1_RS15275 PF00009 Elongation factor Tu GTP binding domain COW1_RS15280 PF01894 Uncharacterised protein family UPF0047 COW1_RS15285 PF07685 CobB/CobQ-like glutamine amidotransferase domain COW1_RS15285 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain COW1_RS15290 PF01497 Periplasmic binding protein COW1_RS15295 PF01923 Cobalamin adenosyltransferase COW1_RS15300 PF03544 Gram-negative bacterial TonB protein C-terminal COW1_RS15305 PF00593 TonB dependent receptor COW1_RS15305 PF07715 TonB-dependent Receptor Plug Domain COW1_RS15315 PF00005 ABC transporter COW1_RS15320 PF01032 FecCD transport family COW1_RS15330 PF00293 NUDIX domain COW1_RS15335 PF00391 PEP-utilising enzyme, mobile domain COW1_RS15335 PF02896 PEP-utilising enzyme, TIM barrel domain COW1_RS15335 PF05524 PEP-utilising enzyme, N-terminal COW1_RS15335 PF01590 GAF domain COW1_RS15345 PF00210 Ferritin-like domain COW1_RS15355 PF03653 Uncharacterised protein family (UPF0093) COW1_RS15360 PF00578 AhpC/TSA family COW1_RS15370 PF00654 Voltage gated chloride channel COW1_RS15375 PF02774 Semialdehyde dehydrogenase, dimerisation domain COW1_RS15375 PF01118 Semialdehyde dehydrogenase, NAD binding domain COW1_RS15390 PF01521 Iron-sulphur cluster biosynthesis COW1_RS15395 PF00285 Citrate synthase, C-terminal domain COW1_RS15400 PF03702 Anhydro-N-acetylmuramic acid kinase COW1_RS15405 PF01551 Peptidase family M23 COW1_RS15405 PF04225 Opacity-associated protein A LysM-like domain COW1_RS15410 PF00579 tRNA synthetases class I (W and Y) COW1_RS15410 PF01479 S4 domain COW1_RS15450 PF08279 HTH domain COW1_RS15450 PF02237 Biotin protein ligase C terminal domain COW1_RS15450 PF03099 Biotin/lipoate A/B protein ligase family COW1_RS15455 PF03309 Type III pantothenate kinase COW1_RS15475 PF17131 Outer membrane lipoprotein-sorting protein COW1_RS15480 PF00717 Peptidase S24-like COW1_RS15480 PF01726 LexA DNA binding domain COW1_RS15495 PF00909 Ammonium Transporter Family COW1_RS15500 PF00892 EamA-like transporter family COW1_RS15510 PF00550 Phosphopantetheine attachment site COW1_RS15510 PF08659 KR domain COW1_RS15510 PF02801 Beta-ketoacyl synthase, C-terminal domain COW1_RS15510 PF00109 Beta-ketoacyl synthase, N-terminal domain COW1_RS15510 PF14765 Polyketide synthase dehydratase COW1_RS15510 PF16197 Ketoacyl-synthetase C-terminal extension COW1_RS15510 PF00107 Zinc-binding dehydrogenase COW1_RS15510 PF00698 Acyl transferase domain COW1_RS15510 PF08240 Alcohol dehydrogenase GroES-like domain COW1_RS15515 PF04298 Putative neutral zinc metallopeptidase COW1_RS15520 PF09297 NADH pyrophosphatase zinc ribbon domain COW1_RS15520 PF00293 NUDIX domain COW1_RS15530 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain COW1_RS15530 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain COW1_RS15530 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain COW1_RS15550 PF03143 Elongation factor Tu C-terminal domain COW1_RS15550 PF00009 Elongation factor Tu GTP binding domain COW1_RS15550 PF03144 Elongation factor Tu domain 2 COW1_RS15560 PF00584 SecE/Sec61-gamma subunits of protein translocation complex COW1_RS15565 PF02357 Transcription termination factor nusG COW1_RS15565 PF00467 KOW motif COW1_RS15570 PF00298 Ribosomal protein L11, RNA binding domain COW1_RS15570 PF03946 Ribosomal protein L11, N-terminal domain COW1_RS15575 PF00687 Ribosomal protein L1p/L10e family COW1_RS15580 PF00466 Ribosomal protein L10 COW1_RS15585 PF16320 Ribosomal protein L7/L12 dimerisation domain COW1_RS15585 PF00542 Ribosomal protein L7/L12 C-terminal domain COW1_RS15590 PF10385 RNA polymerase beta subunit external 1 domain COW1_RS15590 PF04560 RNA polymerase Rpb2, domain 7 COW1_RS15590 PF00562 RNA polymerase Rpb2, domain 6 COW1_RS15590 PF04563 RNA polymerase beta subunit COW1_RS15590 PF04561 RNA polymerase Rpb2, domain 2 COW1_RS15590 PF04565 RNA polymerase Rpb2, domain 3 COW1_RS15595 PF04983 RNA polymerase Rpb1, domain 3 COW1_RS15595 PF00623 RNA polymerase Rpb1, domain 2 COW1_RS15595 PF04997 RNA polymerase Rpb1, domain 1 COW1_RS15595 PF04998 RNA polymerase Rpb1, domain 5 COW1_RS15595 PF05000 RNA polymerase Rpb1, domain 4 COW1_RS15600 PF00164 Ribosomal protein S12/S23 COW1_RS15605 PF00177 Ribosomal protein S7p/S5e COW1_RS15610 PF00009 Elongation factor Tu GTP binding domain COW1_RS15610 PF03764 Elongation factor G, domain IV COW1_RS15610 PF00679 Elongation factor G C-terminus COW1_RS15610 PF14492 Elongation Factor G, domain II COW1_RS15610 PF03144 Elongation factor Tu domain 2 COW1_RS15615 PF03143 Elongation factor Tu C-terminal domain COW1_RS15615 PF03144 Elongation factor Tu domain 2 COW1_RS15615 PF00009 Elongation factor Tu GTP binding domain COW1_RS15625 PF00584 SecE/Sec61-gamma subunits of protein translocation complex COW1_RS15630 PF00467 KOW motif COW1_RS15630 PF02357 Transcription termination factor nusG COW1_RS15635 PF03946 Ribosomal protein L11, N-terminal domain COW1_RS15635 PF00298 Ribosomal protein L11, RNA binding domain COW1_RS15640 PF00687 Ribosomal protein L1p/L10e family COW1_RS15645 PF00466 Ribosomal protein L10 COW1_RS15650 PF00542 Ribosomal protein L7/L12 C-terminal domain COW1_RS15650 PF16320 Ribosomal protein L7/L12 dimerisation domain COW1_RS15655 PF04561 RNA polymerase Rpb2, domain 2 COW1_RS15655 PF04560 RNA polymerase Rpb2, domain 7 COW1_RS15655 PF04563 RNA polymerase beta subunit COW1_RS15655 PF10385 RNA polymerase beta subunit external 1 domain COW1_RS15655 PF00562 RNA polymerase Rpb2, domain 6 COW1_RS15655 PF04565 RNA polymerase Rpb2, domain 3 COW1_RS15660 PF00623 RNA polymerase Rpb1, domain 2 COW1_RS15660 PF04983 RNA polymerase Rpb1, domain 3 COW1_RS15660 PF05000 RNA polymerase Rpb1, domain 4 COW1_RS15660 PF04998 RNA polymerase Rpb1, domain 5 COW1_RS15660 PF04997 RNA polymerase Rpb1, domain 1 COW1_RS15665 PF00164 Ribosomal protein S12/S23 COW1_RS15670 PF00177 Ribosomal protein S7p/S5e COW1_RS15675 PF14492 Elongation Factor G, domain II COW1_RS15675 PF03144 Elongation factor Tu domain 2 COW1_RS15675 PF00009 Elongation factor Tu GTP binding domain COW1_RS15675 PF00679 Elongation factor G C-terminus COW1_RS15675 PF03764 Elongation factor G, domain IV COW1_RS15680 PF00009 Elongation factor Tu GTP binding domain COW1_RS15680 PF03143 Elongation factor Tu C-terminal domain COW1_RS15680 PF03144 Elongation factor Tu domain 2 COW1_RS15685 PF00338 Ribosomal protein S10p/S20e COW1_RS15690 PF00297 Ribosomal protein L3 COW1_RS15695 PF00573 Ribosomal protein L4/L1 family COW1_RS15700 PF00276 Ribosomal protein L23 COW1_RS15705 PF03947 Ribosomal Proteins L2, C-terminal domain COW1_RS15705 PF00181 Ribosomal Proteins L2, RNA binding domain COW1_RS15710 PF00203 Ribosomal protein S19 COW1_RS15715 PF00237 Ribosomal protein L22p/L17e COW1_RS15720 PF07650 KH domain COW1_RS15720 PF00189 Ribosomal protein S3, C-terminal domain COW1_RS15725 PF00252 Ribosomal protein L16p/L10e COW1_RS15730 PF00831 Ribosomal L29 protein COW1_RS15735 PF00366 Ribosomal protein S17 COW1_RS15740 PF00238 Ribosomal protein L14p/L23e COW1_RS15745 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 COW1_RS15745 PF00467 KOW motif COW1_RS15750 PF00281 Ribosomal protein L5 COW1_RS15750 PF00673 ribosomal L5P family C-terminus COW1_RS15755 PF00253 Ribosomal protein S14p/S29e COW1_RS15760 PF00410 Ribosomal protein S8 COW1_RS15765 PF00347 Ribosomal protein L6 COW1_RS15770 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast COW1_RS15775 PF00333 Ribosomal protein S5, N-terminal domain COW1_RS15775 PF03719 Ribosomal protein S5, C-terminal domain COW1_RS15780 PF00327 Ribosomal protein L30p/L7e COW1_RS15785 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A COW1_RS15790 PF00344 SecY translocase COW1_RS15795 PF00444 Ribosomal protein L36 COW1_RS15800 PF00416 Ribosomal protein S13/S18 COW1_RS15805 PF00411 Ribosomal protein S11 COW1_RS15810 PF01479 S4 domain COW1_RS15810 PF00163 Ribosomal protein S4/S9 N-terminal domain COW1_RS15815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain COW1_RS15815 PF01000 RNA polymerase Rpb3/RpoA insert domain COW1_RS15815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain COW1_RS15820 PF01196 Ribosomal protein L17 COW1_RS15830 PF17760 UvrA interaction domain COW1_RS15830 PF17755 UvrA DNA-binding domain COW1_RS15830 PF00005 ABC transporter COW1_RS15835 PF07690 Major Facilitator Superfamily COW1_RS15840 PF00436 Single-strand binding protein family COW1_RS15850 PF02381 MraZ protein, putative antitoxin-like COW1_RS15855 PF01795 MraW methylase family COW1_RS15860 PF04999 Cell division protein FtsL COW1_RS15865 PF00905 Penicillin binding protein transpeptidase domain COW1_RS15865 PF03717 Penicillin-binding Protein dimerisation domain COW1_RS15870 PF08245 Mur ligase middle domain COW1_RS15870 PF02875 Mur ligase family, glutamate ligase domain COW1_RS15870 PF01225 Mur ligase family, catalytic domain COW1_RS15875 PF02875 Mur ligase family, glutamate ligase domain COW1_RS15875 PF08245 Mur ligase middle domain COW1_RS15875 PF01225 Mur ligase family, catalytic domain COW1_RS15880 PF00953 Glycosyl transferase family 4 COW1_RS15880 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 COW1_RS15885 PF02875 Mur ligase family, glutamate ligase domain COW1_RS15885 PF08245 Mur ligase middle domain COW1_RS15890 PF01098 Cell cycle protein COW1_RS15895 PF03033 Glycosyltransferase family 28 N-terminal domain COW1_RS15895 PF04101 Glycosyltransferase family 28 C-terminal domain COW1_RS15900 PF01225 Mur ligase family, catalytic domain COW1_RS15900 PF02875 Mur ligase family, glutamate ligase domain COW1_RS15900 PF08245 Mur ligase middle domain COW1_RS15905 PF01565 FAD binding domain COW1_RS15905 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain COW1_RS15910 PF01820 D-ala D-ala ligase N-terminus COW1_RS15910 PF07478 D-ala D-ala ligase C-terminus COW1_RS15915 PF03799 Cell division protein FtsQ COW1_RS15915 PF08478 POTRA domain, FtsQ-type COW1_RS15920 PF02491 SHS2 domain inserted in FTSA COW1_RS15925 PF00091 Tubulin/FtsZ family, GTPase domain COW1_RS15925 PF12327 FtsZ family, C-terminal domain COW1_RS15930 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase COW1_RS15940 PF01476 LysM domain COW1_RS15940 PF08525 Opacity-associated protein A N-terminal motif COW1_RS15940 PF01551 Peptidase family M23 COW1_RS15945 PF02810 SEC-C motif COW1_RS15945 PF07517 SecA DEAD-like domain COW1_RS15945 PF01043 SecA preprotein cross-linking domain COW1_RS15945 PF07516 SecA Wing and Scaffold domain COW1_RS15950 PF01960 ArgJ family COW1_RS15955 PF00293 NUDIX domain COW1_RS15965 PF03884 DNA gyrase inhibitor YacG COW1_RS15970 PF07072 Cell division protein COW1_RS15975 PF01121 Dephospho-CoA kinase COW1_RS15980 PF06750 Bacterial Peptidase A24 N-terminal domain COW1_RS15980 PF01478 Type IV leader peptidase family COW1_RS15985 PF00482 Type II secretion system (T2SS), protein F COW1_RS15990 PF00437 Type II/IV secretion system protein COW1_RS15990 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain COW1_RS16005 PF13439 Glycosyltransferase Family 4 COW1_RS16005 PF00534 Glycosyl transferases group 1 COW1_RS16010 PF00535 Glycosyl transferase family 2 COW1_RS16020 PF07963 Prokaryotic N-terminal methylation motif COW1_RS16020 PF00114 Pilin (bacterial filament) COW1_RS16025 PF02954 Bacterial regulatory protein, Fis family COW1_RS16025 PF00158 Sigma-54 interaction domain COW1_RS16025 PF00072 Response regulator receiver domain COW1_RS16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS16030 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS16040 PF08442 ATP-grasp domain COW1_RS16040 PF00549 CoA-ligase COW1_RS16045 PF02629 CoA binding domain COW1_RS16045 PF00549 CoA-ligase COW1_RS16050 PF02540 NAD synthase COW1_RS16050 PF00795 Carbon-nitrogen hydrolase COW1_RS16055 PF00543 Nitrogen regulatory protein P-II COW1_RS16060 PF13525 Outer membrane lipoprotein COW1_RS16065 PF01479 S4 domain COW1_RS16065 PF00849 RNA pseudouridylate synthase COW1_RS16070 PF02578 Multi-copper polyphenol oxidoreductase laccase COW1_RS16085 PF01327 Polypeptide deformylase COW1_RS16095 PF07724 AAA domain (Cdc48 subfamily) COW1_RS16095 PF17871 AAA lid domain COW1_RS16095 PF02861 Clp amino terminal domain, pathogenicity island component COW1_RS16095 PF10431 C-terminal, D2-small domain, of ClpB protein COW1_RS16095 PF00004 ATPase family associated with various cellular activities (AAA) COW1_RS16110 PF00106 short chain dehydrogenase COW1_RS16120 PF14572 Phosphoribosyl synthetase-associated domain COW1_RS16120 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase COW1_RS16125 PF02885 Glycosyl transferase family, helical bundle domain COW1_RS16125 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain COW1_RS16125 PF00591 Glycosyl transferase family, a/b domain COW1_RS16130 PF01618 MotA/TolQ/ExbB proton channel family COW1_RS16135 PF13677 Membrane MotB of proton-channel complex MotA/MotB COW1_RS16135 PF00691 OmpA family COW1_RS16155 PF08281 Sigma-70, region 4 COW1_RS16155 PF04542 Sigma-70 region 2 COW1_RS16165 PF00664 ABC transporter transmembrane region COW1_RS16165 PF00005 ABC transporter COW1_RS16180 PF01336 OB-fold nucleic acid binding domain COW1_RS16180 PF00152 tRNA synthetases class II (D, K and N) COW1_RS16180 PF02938 GAD domain COW1_RS16185 PF04073 Aminoacyl-tRNA editing domain COW1_RS16185 PF03129 Anticodon binding domain COW1_RS16185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) COW1_RS16195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COW1_RS16195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COW1_RS16195 PF00205 Thiamine pyrophosphate enzyme, central domain COW1_RS16200 PF10369 Small subunit of acetolactate synthase COW1_RS16205 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain COW1_RS16205 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain COW1_RS16215 PF02666 Phosphatidylserine decarboxylase COW1_RS16220 PF01066 CDP-alcohol phosphatidyltransferase COW1_RS16225 PF00072 Response regulator receiver domain COW1_RS16250 PF08502 LeuA allosteric (dimerisation) domain COW1_RS16250 PF00682 HMGL-like COW1_RS16255 PF03167 Uracil DNA glycosylase superfamily COW1_RS16265 PF00009 Elongation factor Tu GTP binding domain COW1_RS16265 PF03144 Elongation factor Tu domain 2 COW1_RS16265 PF16658 Class II release factor RF3, C-terminal domain COW1_RS16270 PF00483 Nucleotidyl transferase COW1_RS16295 PF00762 Ferrochelatase COW1_RS16300 PF00072 Response regulator receiver domain COW1_RS16305 PF10458 Valyl tRNA synthetase tRNA binding arm COW1_RS16305 PF08264 Anticodon-binding domain of tRNA COW1_RS16305 PF00133 tRNA synthetases class I (I, L, M and V) COW1_RS16315 PF00883 Cytosol aminopeptidase family, catalytic domain COW1_RS16315 PF02789 Cytosol aminopeptidase family, N-terminal domain COW1_RS16320 PF03739 Lipopolysaccharide export system permease LptF/LptG COW1_RS16325 PF03739 Lipopolysaccharide export system permease LptF/LptG COW1_RS16330 PF06271 RDD family COW1_RS16355 PF01743 Poly A polymerase head domain COW1_RS16355 PF12626 Polymerase A arginine-rich C-terminus COW1_RS16355 PF12627 Probable RNA and SrmB- binding site of polymerase A COW1_RS16360 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) COW1_RS16365 PF17864 RuvB AAA lid domain COW1_RS16365 PF05491 RuvB C-terminal winged helix domain COW1_RS16365 PF05496 Holliday junction DNA helicase RuvB P-loop domain COW1_RS16370 PF02548 Ketopantoate hydroxymethyltransferase COW1_RS16375 PF02569 Pantoate-beta-alanine ligase COW1_RS16380 PF02261 Aspartate decarboxylase COW1_RS16395 PF00072 Response regulator receiver domain COW1_RS16395 PF00486 Transcriptional regulatory protein, C terminal COW1_RS16400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS16410 PF00929 Exonuclease COW1_RS16420 PF01979 Amidohydrolase family COW1_RS16425 PF00676 Dehydrogenase E1 component COW1_RS16430 PF02780 Transketolase, C-terminal domain COW1_RS16430 PF00364 Biotin-requiring enzyme COW1_RS16430 PF02779 Transketolase, pyrimidine binding domain COW1_RS16440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain COW1_RS16440 PF07992 Pyridine nucleotide-disulphide oxidoreductase COW1_RS16450 PF00764 Arginosuccinate synthase COW1_RS16455 PF13089 Polyphosphate kinase N-terminal domain COW1_RS16455 PF17941 Polyphosphate kinase C-terminal domain 1 COW1_RS16455 PF13090 Polyphosphate kinase C-terminal domain 2 COW1_RS16455 PF02503 Polyphosphate kinase middle domain COW1_RS16460 PF00528 Binding-protein-dependent transport system inner membrane component COW1_RS16465 PF00528 Binding-protein-dependent transport system inner membrane component COW1_RS16470 PF00005 ABC transporter COW1_RS16475 PF01895 PhoU domain COW1_RS16480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain COW1_RS16480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain COW1_RS16485 PF00202 Aminotransferase class-III COW1_RS16505 PF13537 Glutamine amidotransferase domain COW1_RS16505 PF00733 Asparagine synthase COW1_RS16510 PF00462 Glutaredoxin COW1_RS16515 PF17820 PDZ domain COW1_RS16515 PF13180 PDZ domain COW1_RS16520 PF01784 NIF3 (NGG1p interacting factor 3) COW1_RS16525 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal COW1_RS16525 PF00355 Rieske [2Fe-2S] domain COW1_RS16530 PF00033 Cytochrome b/b6/petB COW1_RS16530 PF00032 Cytochrome b(C-terminal)/b6/petD COW1_RS16535 PF02167 Cytochrome C1 family COW1_RS16540 PF02798 Glutathione S-transferase, N-terminal domain COW1_RS16540 PF00043 Glutathione S-transferase, C-terminal domain COW1_RS16545 PF04386 Stringent starvation protein B COW1_RS16550 PF00589 Phage integrase family COW1_RS16550 PF13495 Phage integrase, N-terminal SAM-like domain COW1_RS16585 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB COW1_RS16590 PF01381 Helix-turn-helix COW1_RS16595 PF00893 Small Multidrug Resistance protein COW1_RS16610 PF02567 Phenazine biosynthesis-like protein COW1_RS16620 PF01810 LysE type translocator COW1_RS16640 PF00512 His Kinase A (phospho-acceptor) domain COW1_RS16640 PF00989 PAS fold COW1_RS16640 PF16736 Single Cache-like COW1_RS16640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS16645 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS16645 PF10442 FIST C domain COW1_RS16645 PF00563 EAL domain COW1_RS16645 PF08495 FIST N domain COW1_RS16655 PF04972 BON domain COW1_RS16660 PF13580 SIS domain COW1_RS16665 PF02021 Uncharacterised protein family UPF0102 COW1_RS16675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases COW1_RS16680 PF01136 Peptidase family U32 COW1_RS16680 PF16325 Peptidase family U32 C-terminal domain COW1_RS16685 PF08331 Domain of unknown function (DUF1730) COW1_RS16690 PF03853 YjeF-related protein N-terminus COW1_RS16690 PF01256 Carbohydrate kinase COW1_RS16695 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE COW1_RS16700 PF11741 AMIN domain COW1_RS16700 PF01520 N-acetylmuramoyl-L-alanine amidase COW1_RS16705 PF01119 DNA mismatch repair protein, C-terminal domain COW1_RS16705 PF08676 MutL C terminal dimerisation domain COW1_RS16715 PF17209 Hfq protein COW1_RS16720 PF13167 GTP-binding GTPase N-terminal COW1_RS16720 PF01926 50S ribosome-binding GTPase COW1_RS16720 PF16360 GTP-binding GTPase Middle Region COW1_RS16725 PF01145 SPFH domain / Band 7 family COW1_RS16725 PF12221 Bacterial membrane protein N terminal COW1_RS16730 PF01145 SPFH domain / Band 7 family COW1_RS16740 PF13393 Histidyl-tRNA synthetase COW1_RS16745 PF00709 Adenylosuccinate synthetase COW1_RS16760 PF08206 Ribonuclease B OB domain COW1_RS16760 PF00575 S1 RNA binding domain COW1_RS16760 PF17876 Cold shock domain COW1_RS16760 PF08461 Ribonuclease R winged-helix domain COW1_RS16760 PF00773 RNB domain COW1_RS16765 PF00223 Photosystem I psaA/psaB protein COW1_RS16765 PF00691 OmpA family COW1_RS16770 PF00588 SpoU rRNA Methylase family COW1_RS16770 PF08032 RNA 2'-O ribose methyltransferase substrate binding COW1_RS16775 PF01250 Ribosomal protein S6 COW1_RS16780 PF00436 Single-strand binding protein family COW1_RS16785 PF01084 Ribosomal protein S18 COW1_RS16795 PF03948 Ribosomal protein L9, C-terminal domain COW1_RS16795 PF01281 Ribosomal protein L9, N-terminal domain COW1_RS16800 PF00772 DnaB-like helicase N terminal domain COW1_RS16800 PF03796 DnaB-like helicase C terminal domain COW1_RS16805 PF00842 Alanine racemase, C-terminal domain COW1_RS16805 PF01168 Alanine racemase, N-terminal domain COW1_RS16820 PF00211 Adenylate and Guanylate cyclase catalytic domain COW1_RS16825 PF18073 Rubredoxin metal binding domain COW1_RS16830 PF07238 PilZ domain COW1_RS16835 PF01595 Cyclin M transmembrane N-terminal domain COW1_RS16835 PF03471 Transporter associated domain COW1_RS16835 PF00571 CBS domain COW1_RS16840 PF01578 Cytochrome C assembly protein COW1_RS16850 PF00448 SRP54-type protein, GTPase domain COW1_RS16850 PF02881 SRP54-type protein, helical bundle domain COW1_RS16850 PF02978 Signal peptide binding domain COW1_RS16855 PF00886 Ribosomal protein S16 COW1_RS16860 PF01782 RimM N-terminal domain COW1_RS16860 PF05239 PRC-barrel domain COW1_RS16865 PF01746 tRNA (Guanine-1)-methyltransferase COW1_RS16870 PF01245 Ribosomal protein L19 COW1_RS16880 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain COW1_RS16880 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain COW1_RS16885 PF00183 Hsp90 protein COW1_RS16885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COW1_RS16890 PF01323 DSBA-like thioredoxin domain COW1_RS16895 PF01479 S4 domain COW1_RS16900 PF00582 Universal stress protein family COW1_RS16905 PF00916 Sulfate permease family COW1_RS16905 PF01740 STAS domain COW1_RS16935 PF00990 Diguanylate cyclase, GGDEF domain COW1_RS16940 PF00085 Thioredoxin