CFK21_RS00190	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK21_RS00190	SM00876	Biotin and Thiamin Synthesis associated domain
CFK21_RS00230	SM00487	DEAD-like helicases superfamily
CFK21_RS00230	SM00490	helicase superfamily c-terminal domain
CFK21_RS00240	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFK21_RS00240	SM00954	Region found in RelA / SpoT proteins
CFK21_RS00245	SM01409	CFK21_RS00245
CFK21_RS00250	SM00072	Guanylate kinase homologues.
CFK21_RS00260	SM00220	Serine/Threonine protein kinases, catalytic domain
CFK21_RS00265	SM00331	Sigma factor PP2C-like phosphatases
CFK21_RS00265	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CFK21_RS00280	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK21_RS00295	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK21_RS00305	SM00318	Staphylococcal nuclease homologues
CFK21_RS00315	SM00919	Malic enzyme, NAD binding domain
CFK21_RS00315	SM01274	CFK21_RS00315
CFK21_RS00330	SM00842	Cell division protein FtsA
CFK21_RS00350	SM00965	Secretin and TonB N terminus short domain
CFK21_RS00365	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFK21_RS00395	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS00395	SM00267	diguanylate cyclase
CFK21_RS00395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS00410	SM00507	HNH nucleases
CFK21_RS00415	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CFK21_RS00415	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CFK21_RS00435	SM00487	DEAD-like helicases superfamily
CFK21_RS00435	SM00490	helicase superfamily c-terminal domain
CFK21_RS00440	SM00836	DALR anticodon binding domain
CFK21_RS00440	SM01016	Arginyl tRNA synthetase N terminal dom
CFK21_RS00485	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS00495	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS00495	SM00091	PAS domain
CFK21_RS00495	SM00267	diguanylate cyclase
CFK21_RS00525	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS00555	SM00704	CDGSH-type zinc finger. Function unknown.
CFK21_RS00575	SM00992	Hemimethylated DNA-binding protein YccV like
CFK21_RS00590	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CFK21_RS00640	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK21_RS00655	SM00881	CoA binding domain
CFK21_RS00700	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS00735	SM00490	helicase superfamily c-terminal domain
CFK21_RS00790	SM00731	SprT homologues.
CFK21_RS00820	SM00965	Secretin and TonB N terminus short domain
CFK21_RS00825	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS00830	SM00028	Tetratricopeptide repeats
CFK21_RS00835	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS00875	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS00875	SM00448	cheY-homologous receiver domain
CFK21_RS00880	SM00091	PAS domain
CFK21_RS00880	SM00387	Histidine kinase-like ATPases
CFK21_RS00880	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS00890	SM01230	CFK21_RS00890
CFK21_RS00920	SM00836	DALR anticodon binding domain
CFK21_RS00935	SM00563	Phosphate acyltransferases
CFK21_RS00940	SM00387	Histidine kinase-like ATPases
CFK21_RS00940	SM00433	TopoisomeraseII
CFK21_RS00950	SM00480	DNA polymerase III beta subunit
CFK21_RS00955	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS00955	SM00760	Bacterial dnaA protein helix-turn-helix domain
CFK21_RS00970	SM01234	CFK21_RS00970
CFK21_RS01020	SM00487	DEAD-like helicases superfamily
CFK21_RS01045	SM00460	Transglutaminase/protease-like homologues
CFK21_RS01065	SM00342	helix_turn_helix, arabinose operon control protein
CFK21_RS01070	SM01228	CFK21_RS01070
CFK21_RS01085	SM00470	ParB-like nuclease domain
CFK21_RS01125	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS01200	SM00953	CFK21_RS01200
CFK21_RS01215	SM00100	Cyclic nucleotide-monophosphate binding domain
CFK21_RS01220	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK21_RS01270	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS01305	SM01004	Delta-aminolevulinic acid dehydratase
CFK21_RS01330	SM00267	diguanylate cyclase
CFK21_RS01350	SM00938	Nitrogen regulatory protein P-II
CFK21_RS01360	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS01365	SM00671	Sel1-like repeats.
CFK21_RS01385	SM00450	Rhodanese Homology Domain
CFK21_RS01390	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK21_RS01405	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CFK21_RS01405	SM00245	tail specific protease
CFK21_RS01460	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS01460	SM01086	C-terminal, D2-small domain, of ClpB protein
CFK21_RS01485	SM00267	diguanylate cyclase
CFK21_RS01510	SM01321	CFK21_RS01510
CFK21_RS01515	SM00530	Helix-turn-helix XRE-family like proteins 
CFK21_RS01525	SM00267	diguanylate cyclase
CFK21_RS01540	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS01540	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFK21_RS01540	SM00091	PAS domain
CFK21_RS01540	SM00267	diguanylate cyclase
CFK21_RS01540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS01555	SM00448	cheY-homologous receiver domain
CFK21_RS01555	SM00850	LytTr DNA-binding domain
CFK21_RS01615	SM00341	Helicase and RNase D C-terminal
CFK21_RS01615	SM00474	3'-5' exonuclease
CFK21_RS01635	SM00450	Rhodanese Homology Domain
CFK21_RS01665	SM01091	Transporter associated domain
CFK21_RS01675	SM00028	Tetratricopeptide repeats
CFK21_RS01690	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS01690	SM00448	cheY-homologous receiver domain
CFK21_RS01695	SM00091	PAS domain
CFK21_RS01695	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS01695	SM00387	Histidine kinase-like ATPases
CFK21_RS01695	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS01735	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CFK21_RS01735	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CFK21_RS01735	SM00493	CFK21_RS01735
CFK21_RS01740	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS01765	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CFK21_RS01765	SM00474	3'-5' exonuclease
CFK21_RS01765	SM00475	5'-3' exonuclease
CFK21_RS01765	SM00482	DNA polymerase A domain
CFK21_RS01805	SM00267	diguanylate cyclase
CFK21_RS01870	SM00100	Cyclic nucleotide-monophosphate binding domain
CFK21_RS01870	SM00419	helix_turn_helix, cAMP Regulatory protein
CFK21_RS01915	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS01925	SM00448	cheY-homologous receiver domain
CFK21_RS01925	SM00862	Transcriptional regulatory protein, C terminal
CFK21_RS01930	SM00387	Histidine kinase-like ATPases
CFK21_RS01930	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS01945	SM00450	Rhodanese Homology Domain
CFK21_RS01950	SM00028	Tetratricopeptide repeats
CFK21_RS01950	SM00448	cheY-homologous receiver domain
CFK21_RS01955	SM00387	Histidine kinase-like ATPases
CFK21_RS01960	SM00852	Probable molybdopterin binding domain
CFK21_RS01995	SM00091	PAS domain
CFK21_RS01995	SM00267	diguanylate cyclase
CFK21_RS02000	SM00448	cheY-homologous receiver domain
CFK21_RS02020	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CFK21_RS02035	SM00357	Cold shock protein domain
CFK21_RS02055	SM01018	B12 binding domain
CFK21_RS02060	SM00900	CFK21_RS02060
CFK21_RS02070	SM00710	Parallel beta-helix repeats
CFK21_RS02070	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
CFK21_RS02075	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS02100	SM00953	CFK21_RS02100
CFK21_RS02115	SM00400	zinc finger
CFK21_RS02115	SM00493	CFK21_RS02115
CFK21_RS02115	SM00766	DNA primase DnaG DnaB-binding
CFK21_RS02135	SM01207	CFK21_RS02135
CFK21_RS02140	SM00905	Dihydroneopterin aldolase
CFK21_RS02165	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFK21_RS02255	SM00344	helix_turn_helix ASNC type
CFK21_RS02260	SM00344	helix_turn_helix ASNC type
CFK21_RS02270	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK21_RS02285	SM00100	Cyclic nucleotide-monophosphate binding domain
CFK21_RS02285	SM00419	helix_turn_helix, cAMP Regulatory protein
CFK21_RS02325	SM00327	von Willebrand factor (vWF) type A domain
CFK21_RS02335	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK21_RS02355	SM00028	Tetratricopeptide repeats
CFK21_RS02380	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK21_RS02395	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CFK21_RS02410	SM00961	Ribulose bisphosphate carboxylase, small chain
CFK21_RS02420	SM00327	von Willebrand factor (vWF) type A domain
CFK21_RS02430	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS02430	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFK21_RS02430	SM00091	PAS domain
CFK21_RS02430	SM00267	diguanylate cyclase
CFK21_RS02455	SM01001	AIR carboxylase
CFK21_RS02490	SM00938	Nitrogen regulatory protein P-II
CFK21_RS02565	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK21_RS02620	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CFK21_RS02620	SM00387	Histidine kinase-like ATPases
CFK21_RS02620	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS02625	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS02625	SM00448	cheY-homologous receiver domain
CFK21_RS02650	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFK21_RS02675	SM00897	FIST N domain
CFK21_RS02675	SM01204	CFK21_RS02675
CFK21_RS02725	SM00100	Cyclic nucleotide-monophosphate binding domain
CFK21_RS02725	SM00419	helix_turn_helix, cAMP Regulatory protein
CFK21_RS02740	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS02755	SM00478	endonuclease III
CFK21_RS02900	SM00028	Tetratricopeptide repeats
CFK21_RS02905	SM00387	Histidine kinase-like ATPases
CFK21_RS02910	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS02910	SM00448	cheY-homologous receiver domain
CFK21_RS02935	SM00883	Chaperonin 10 Kd subunit
CFK21_RS03030	SM00450	Rhodanese Homology Domain
CFK21_RS03060	SM00954	Region found in RelA / SpoT proteins
CFK21_RS03065	SM01321	CFK21_RS03065
CFK21_RS03150	SM00248	ankyrin repeats
CFK21_RS03160	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFK21_RS03160	SM00091	PAS domain
CFK21_RS03160	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFK21_RS03170	SM00327	von Willebrand factor (vWF) type A domain
CFK21_RS03180	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS03180	SM00091	PAS domain
CFK21_RS03180	SM00267	diguanylate cyclase
CFK21_RS03245	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS03255	SM00320	WD40 repeats
CFK21_RS03285	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS03285	SM00267	diguanylate cyclase
CFK21_RS03285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS03290	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS03290	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFK21_RS03290	SM00091	PAS domain
CFK21_RS03290	SM00267	diguanylate cyclase
CFK21_RS03295	SM00267	diguanylate cyclase
CFK21_RS03320	SM00460	Transglutaminase/protease-like homologues
CFK21_RS03360	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS03380	SM00877	CFK21_RS03380
CFK21_RS03430	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS03450	SM00487	DEAD-like helicases superfamily
CFK21_RS03450	SM00490	helicase superfamily c-terminal domain
CFK21_RS03465	SM00961	Ribulose bisphosphate carboxylase, small chain
CFK21_RS03490	SM00877	CFK21_RS03490
CFK21_RS03495	SM00877	CFK21_RS03495
CFK21_RS03500	SM00877	CFK21_RS03500
CFK21_RS03565	SM00507	HNH nucleases
CFK21_RS03575	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS03610	SM00363	S4 RNA-binding domain
CFK21_RS03620	SM00267	diguanylate cyclase
CFK21_RS03715	SM00155	Phospholipase D. Active site motifs.
CFK21_RS03735	SM00464	Found in ATP-dependent protease La (LON)
CFK21_RS03740	SM00014	Acid phosphatase homologues
CFK21_RS03760	SM01007	Class II Aldolase and Adducin N-terminal domain
CFK21_RS03830	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS03870	SM00028	Tetratricopeptide repeats
CFK21_RS03875	SM00028	Tetratricopeptide repeats
CFK21_RS03880	SM00028	Tetratricopeptide repeats
CFK21_RS03885	SM00028	Tetratricopeptide repeats
CFK21_RS03890	SM00028	Tetratricopeptide repeats
CFK21_RS03915	SM00878	Biotin carboxylase C-terminal domain
CFK21_RS03940	SM00798	AICARFT/IMPCHase bienzyme
CFK21_RS03940	SM00851	MGS-like domain
CFK21_RS03945	SM01209	CFK21_RS03945
CFK21_RS03945	SM01210	CFK21_RS03945
CFK21_RS03950	SM00357	Cold shock protein domain
CFK21_RS03950	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS03950	SM00959	Rho termination factor, N-terminal domain
CFK21_RS03960	SM00487	DEAD-like helicases superfamily
CFK21_RS03960	SM00490	helicase superfamily c-terminal domain
CFK21_RS03975	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS03990	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CFK21_RS04025	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFK21_RS04035	SM00287	Bacterial SH3 domain homologues
CFK21_RS04040	SM00644	CFK21_RS04040
CFK21_RS04045	SM00855	Phosphoglycerate mutase family
CFK21_RS04070	SM00769	Water Stress and Hypersensitive response
CFK21_RS04095	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFK21_RS04095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS04100	SM00448	cheY-homologous receiver domain
CFK21_RS04105	SM00387	Histidine kinase-like ATPases
CFK21_RS04165	SM00849	Metallo-beta-lactamase superfamily
CFK21_RS04215	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS04265	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK21_RS04275	SM00100	Cyclic nucleotide-monophosphate binding domain
CFK21_RS04275	SM00450	Rhodanese Homology Domain
CFK21_RS04295	SM00271	DnaJ molecular chaperone homology domain
CFK21_RS04325	SM00996	S-adenosyl-L-homocysteine hydrolase
CFK21_RS04325	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CFK21_RS04345	SM00450	Rhodanese Homology Domain
CFK21_RS04400	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CFK21_RS04415	SM00904	Riboflavin kinase
CFK21_RS04555	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFK21_RS04555	SM00091	PAS domain
CFK21_RS04555	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS04570	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS04575	SM01116	CFK21_RS04575
CFK21_RS04585	SM00947	Carbonic anhydrase
CFK21_RS04590	SM00834	Putative regulatory protein
CFK21_RS04595	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS04615	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CFK21_RS04615	SM00267	diguanylate cyclase
CFK21_RS04625	SM00849	Metallo-beta-lactamase superfamily
CFK21_RS04625	SM01027	Beta-Casp domain
CFK21_RS04655	SM00938	Nitrogen regulatory protein P-II
CFK21_RS04660	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK21_RS04665	SM00448	cheY-homologous receiver domain
CFK21_RS04665	SM00862	Transcriptional regulatory protein, C terminal
CFK21_RS04670	SM00091	PAS domain
CFK21_RS04670	SM00387	Histidine kinase-like ATPases
CFK21_RS04670	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS04710	SM00478	endonuclease III
CFK21_RS04710	SM00525	CFK21_RS04710
CFK21_RS04715	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS04715	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFK21_RS04715	SM00091	PAS domain
CFK21_RS04715	SM00267	diguanylate cyclase
CFK21_RS04725	SM00900	CFK21_RS04725
CFK21_RS04780	SM01350	CFK21_RS04780
CFK21_RS04805	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK21_RS04820	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK21_RS04820	SM01091	Transporter associated domain
CFK21_RS04880	SM00316	Ribosomal protein S1-like RNA-binding domain
CFK21_RS04925	SM00831	Cation transporter/ATPase, N-terminus
CFK21_RS04955	SM00849	Metallo-beta-lactamase superfamily
CFK21_RS04965	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK21_RS04965	SM00924	MgtE intracellular N domain
CFK21_RS05010	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS05030	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK21_RS05050	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS05210	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CFK21_RS05220	SM00838	Elongation factor G C-terminus
CFK21_RS05235	SM00358	Double-stranded RNA binding motif
CFK21_RS05235	SM00535	Ribonuclease III family
CFK21_RS05240	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS05265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS05265	SM00387	Histidine kinase-like ATPases
CFK21_RS05265	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS05265	SM00448	cheY-homologous receiver domain
CFK21_RS05350	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CFK21_RS05355	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS05415	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS05470	SM00450	Rhodanese Homology Domain
CFK21_RS05495	SM00855	Phosphoglycerate mutase family
CFK21_RS05525	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CFK21_RS05555	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS05565	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS05600	SM00965	Secretin and TonB N terminus short domain
CFK21_RS05630	SM00849	Metallo-beta-lactamase superfamily
CFK21_RS05660	SM00028	Tetratricopeptide repeats
CFK21_RS05665	SM00450	Rhodanese Homology Domain
CFK21_RS05690	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFK21_RS05695	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFK21_RS05695	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS05725	SM00670	Large family of predicted nucleotide-binding domains
CFK21_RS05745	SM01130	CFK21_RS05745
CFK21_RS05755	SM00849	Metallo-beta-lactamase superfamily
CFK21_RS05760	SM01211	CFK21_RS05760
CFK21_RS05790	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS05860	SM00861	Transketolase, pyrimidine binding domain
CFK21_RS05885	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS05930	SM00387	Histidine kinase-like ATPases
CFK21_RS05930	SM00433	TopoisomeraseII
CFK21_RS05935	SM00434	DNA Topoisomerase IV
CFK21_RS05950	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS05950	SM00062	Bacterial periplasmic substrate-binding proteins
CFK21_RS05950	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFK21_RS05950	SM00091	PAS domain
CFK21_RS05950	SM00267	diguanylate cyclase
CFK21_RS05955	SM00028	Tetratricopeptide repeats
CFK21_RS05960	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CFK21_RS05960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS05975	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS05975	SM00091	PAS domain
CFK21_RS05975	SM00267	diguanylate cyclase
CFK21_RS05995	SM00841	Elongation factor P, C-terminal
CFK21_RS05995	SM01185	CFK21_RS05995
CFK21_RS06010	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS06045	SM00562	CFK21_RS06045
CFK21_RS06050	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK21_RS06055	SM00028	Tetratricopeptide repeats
CFK21_RS06060	SM00530	Helix-turn-helix XRE-family like proteins 
CFK21_RS06075	SM00564	beta-propeller repeat
CFK21_RS06080	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS06095	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS06105	SM00890	Domain of unknown function
CFK21_RS06115	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS06115	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFK21_RS06115	SM00091	PAS domain
CFK21_RS06115	SM00267	diguanylate cyclase
CFK21_RS06130	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK21_RS06130	SM01240	CFK21_RS06130
CFK21_RS06175	SM00849	Metallo-beta-lactamase superfamily
CFK21_RS06195	SM00062	Bacterial periplasmic substrate-binding proteins
CFK21_RS06205	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK21_RS06235	SM00822	CFK21_RS06235
CFK21_RS06265	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS06420	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK21_RS06450	SM00849	Metallo-beta-lactamase superfamily
CFK21_RS06540	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CFK21_RS06545	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS06570	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS06620	SM00487	DEAD-like helicases superfamily
CFK21_RS06620	SM00490	helicase superfamily c-terminal domain
CFK21_RS06700	SM00974	CFK21_RS06700
CFK21_RS06710	SM00530	Helix-turn-helix XRE-family like proteins 
CFK21_RS06765	SM00479	CFK21_RS06765
CFK21_RS06770	SM00331	Sigma factor PP2C-like phosphatases
CFK21_RS06770	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CFK21_RS06775	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CFK21_RS06780	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CFK21_RS06785	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CFK21_RS06795	SM00028	Tetratricopeptide repeats
CFK21_RS06850	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS06930	SM00448	cheY-homologous receiver domain
CFK21_RS06935	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK21_RS06940	SM00704	CDGSH-type zinc finger. Function unknown.
CFK21_RS06960	SM00331	Sigma factor PP2C-like phosphatases
CFK21_RS06980	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS07000	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFK21_RS07000	SM00954	Region found in RelA / SpoT proteins
CFK21_RS07010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS07010	SM00387	Histidine kinase-like ATPases
CFK21_RS07010	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS07010	SM00448	cheY-homologous receiver domain
CFK21_RS07015	SM00448	cheY-homologous receiver domain
CFK21_RS07045	SM00858	CFK21_RS07045
CFK21_RS07050	SM00260	Two component signalling adaptor domain
CFK21_RS07050	SM00448	cheY-homologous receiver domain
CFK21_RS07055	SM00138	Methyltransferase, chemotaxis proteins 
CFK21_RS07100	SM00047	Lysozyme subfamily 2
CFK21_RS07115	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS07115	SM00091	PAS domain
CFK21_RS07115	SM00267	diguanylate cyclase
CFK21_RS07115	SM00448	cheY-homologous receiver domain
CFK21_RS07145	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS07150	SM00387	Histidine kinase-like ATPases
CFK21_RS07150	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS07155	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS07155	SM00448	cheY-homologous receiver domain
CFK21_RS07180	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS07195	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS07195	SM00267	diguanylate cyclase
CFK21_RS07210	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS07215	SM00487	DEAD-like helicases superfamily
CFK21_RS07215	SM00490	helicase superfamily c-terminal domain
CFK21_RS07275	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS07275	SM00962	SRP54-type protein, GTPase domain
CFK21_RS07290	SM00448	cheY-homologous receiver domain
CFK21_RS07300	SM00073	Histidine Phosphotransfer domain
CFK21_RS07300	SM00260	Two component signalling adaptor domain
CFK21_RS07300	SM00387	Histidine kinase-like ATPases
CFK21_RS07300	SM01231	CFK21_RS07300
CFK21_RS07305	SM00448	cheY-homologous receiver domain
CFK21_RS07315	SM00260	Two component signalling adaptor domain
CFK21_RS07320	SM00260	Two component signalling adaptor domain
CFK21_RS07390	SM00642	Alpha-amylase domain
CFK21_RS07430	SM01323	CFK21_RS07430
CFK21_RS07485	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK21_RS07500	SM00448	cheY-homologous receiver domain
CFK21_RS07510	SM01133	CFK21_RS07510
CFK21_RS07515	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS07515	SM00091	PAS domain
CFK21_RS07515	SM00267	diguanylate cyclase
CFK21_RS07515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS07540	SM01329	CFK21_RS07540
CFK21_RS07545	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CFK21_RS07665	SM00840	CFK21_RS07665
CFK21_RS07675	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS07675	SM00091	PAS domain
CFK21_RS07675	SM00267	diguanylate cyclase
CFK21_RS07720	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS07720	SM00994	ClpX C4-type zinc finger
CFK21_RS07720	SM01086	C-terminal, D2-small domain, of ClpB protein
CFK21_RS07725	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS07725	SM00464	Found in ATP-dependent protease La (LON)
CFK21_RS07730	SM00411	bacterial (prokaryotic) histone like domain
CFK21_RS07775	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS07820	SM00357	Cold shock protein domain
CFK21_RS07875	SM00028	Tetratricopeptide repeats
CFK21_RS07905	SM00996	S-adenosyl-L-homocysteine hydrolase
CFK21_RS07905	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CFK21_RS07935	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS07990	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK21_RS07990	SM00450	Rhodanese Homology Domain
CFK21_RS08000	SM00450	Rhodanese Homology Domain
CFK21_RS08030	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS08030	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFK21_RS08030	SM00091	PAS domain
CFK21_RS08030	SM00267	diguanylate cyclase
CFK21_RS08045	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFK21_RS08085	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CFK21_RS08085	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFK21_RS08085	SM00267	diguanylate cyclase
CFK21_RS08090	SM00479	CFK21_RS08090
CFK21_RS08160	SM00487	DEAD-like helicases superfamily
CFK21_RS08160	SM00490	helicase superfamily c-terminal domain
CFK21_RS08245	SM00271	DnaJ molecular chaperone homology domain
CFK21_RS08255	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CFK21_RS08260	SM00851	MGS-like domain
CFK21_RS08260	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CFK21_RS08275	SM01103	CFK21_RS08275
CFK21_RS08285	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS08340	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CFK21_RS08345	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CFK21_RS08415	SM00831	Cation transporter/ATPase, N-terminus
CFK21_RS08470	SM00422	helix_turn_helix, mercury resistance
CFK21_RS08485	SM00671	Sel1-like repeats.
CFK21_RS08520	SM00316	Ribosomal protein S1-like RNA-binding domain
CFK21_RS08520	SM00322	K homology RNA-binding domain
CFK21_RS08540	SM01387	CFK21_RS08540
CFK21_RS08545	SM00316	Ribosomal protein S1-like RNA-binding domain
CFK21_RS08545	SM00322	K homology RNA-binding domain
CFK21_RS08555	SM00320	WD40 repeats
CFK21_RS08560	SM00448	cheY-homologous receiver domain
CFK21_RS08610	SM00968	SMC proteins Flexible Hinge Domain
CFK21_RS08615	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CFK21_RS08620	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CFK21_RS08620	SM00292	breast cancer carboxy-terminal domain
CFK21_RS08620	SM00532	Ligase N family
CFK21_RS08675	SM00327	von Willebrand factor (vWF) type A domain
CFK21_RS08700	SM00491	CFK21_RS08700
CFK21_RS08750	SM00091	PAS domain
CFK21_RS08750	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS08755	SM00450	Rhodanese Homology Domain
CFK21_RS08795	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS08805	SM00849	Metallo-beta-lactamase superfamily
CFK21_RS08820	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS08860	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFK21_RS08860	SM00267	diguanylate cyclase
CFK21_RS08875	SM00226	Low molecular weight phosphatase family
CFK21_RS08880	SM00316	Ribosomal protein S1-like RNA-binding domain
CFK21_RS08885	SM00363	S4 RNA-binding domain
CFK21_RS08920	SM00878	Biotin carboxylase C-terminal domain
CFK21_RS08945	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CFK21_RS08950	SM00822	CFK21_RS08950
CFK21_RS08960	SM00825	Beta-ketoacyl synthase
CFK21_RS09105	SM00506	Appr-1"-p processing enzyme
CFK21_RS09120	SM00867	YceI-like domain 
CFK21_RS09140	SM00220	Serine/Threonine protein kinases, catalytic domain
CFK21_RS09145	SM00331	Sigma factor PP2C-like phosphatases
CFK21_RS09145	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CFK21_RS09175	SM00861	Transketolase, pyrimidine binding domain
CFK21_RS09205	SM00244	prohibitin homologues
CFK21_RS09250	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CFK21_RS09250	SM00465	GIY-YIG type nucleases (URI domain)
CFK21_RS09255	SM00986	Uracil DNA glycosylase superfamily
CFK21_RS09255	SM00987	UreE urease accessory protein, C-terminal domain 
CFK21_RS09260	SM00421	helix_turn_helix, Lux Regulon
CFK21_RS09260	SM00448	cheY-homologous receiver domain
CFK21_RS09300	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS09320	SM00885	D5 N terminal like
CFK21_RS09320	SM00942	Primase C terminal 1 (PriCT-1)
CFK21_RS09320	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CFK21_RS09375	SM00671	Sel1-like repeats.
CFK21_RS09405	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CFK21_RS09420	SM00100	Cyclic nucleotide-monophosphate binding domain
CFK21_RS09420	SM00267	diguanylate cyclase
CFK21_RS09435	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CFK21_RS09535	SM00387	Histidine kinase-like ATPases
CFK21_RS09540	SM00421	helix_turn_helix, Lux Regulon
CFK21_RS09540	SM00448	cheY-homologous receiver domain
CFK21_RS09545	SM00450	Rhodanese Homology Domain
CFK21_RS09550	SM00642	Alpha-amylase domain
CFK21_RS09600	SM00267	diguanylate cyclase
CFK21_RS09625	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS09635	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS09635	SM00843	CFK21_RS09635
CFK21_RS09640	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CFK21_RS09640	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CFK21_RS09665	SM00316	Ribosomal protein S1-like RNA-binding domain
CFK21_RS09670	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS09670	SM01086	C-terminal, D2-small domain, of ClpB protein
CFK21_RS09680	SM00357	Cold shock protein domain
CFK21_RS09685	SM01329	CFK21_RS09685
CFK21_RS09710	SM00267	diguanylate cyclase
CFK21_RS09785	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS09790	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK21_RS09790	SM00924	MgtE intracellular N domain
CFK21_RS09930	SM00257	Lysin motif
CFK21_RS09950	SM00463	Small MutS-related domain
CFK21_RS09985	SM00487	DEAD-like helicases superfamily
CFK21_RS09990	SM01321	CFK21_RS09990
CFK21_RS10020	SM01192	CFK21_RS10020
CFK21_RS10020	SM01193	CFK21_RS10020
CFK21_RS10045	SM00481	DNA polymerase alpha chain like domain
CFK21_RS10055	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS10095	SM00935	Outer membrane protein (OmpH-like)
CFK21_RS10105	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CFK21_RS10150	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFK21_RS10160	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CFK21_RS10235	SM00100	Cyclic nucleotide-monophosphate binding domain
CFK21_RS10260	SM00226	Low molecular weight phosphatase family
CFK21_RS10265	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CFK21_RS10270	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS10270	SM00091	PAS domain
CFK21_RS10270	SM00267	diguanylate cyclase
CFK21_RS10330	SM00487	DEAD-like helicases superfamily
CFK21_RS10330	SM00490	helicase superfamily c-terminal domain
CFK21_RS10330	SM00982	CFK21_RS10330
CFK21_RS10330	SM01058	CarD-like/TRCF domain
CFK21_RS10420	SM01118	CFK21_RS10420
CFK21_RS10455	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS10455	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CFK21_RS10455	SM00267	diguanylate cyclase
CFK21_RS10485	SM00422	helix_turn_helix, mercury resistance
CFK21_RS10490	SM00411	bacterial (prokaryotic) histone like domain
CFK21_RS10495	SM00873	B3/4 domain
CFK21_RS10495	SM00874	tRNA synthetase B5 domain
CFK21_RS10495	SM00896	Ferredoxin-fold anticodon binding domain
CFK21_RS10520	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CFK21_RS10545	SM00487	DEAD-like helicases superfamily
CFK21_RS10545	SM00490	helicase superfamily c-terminal domain
CFK21_RS10620	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CFK21_RS10625	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CFK21_RS10630	SM00028	Tetratricopeptide repeats
CFK21_RS10640	SM00411	bacterial (prokaryotic) histone like domain
CFK21_RS10645	SM00316	Ribosomal protein S1-like RNA-binding domain
CFK21_RS10670	SM00830	Chorismate mutase type II
CFK21_RS10685	SM00434	DNA Topoisomerase IV
CFK21_RS10695	SM00448	cheY-homologous receiver domain
CFK21_RS10695	SM00862	Transcriptional regulatory protein, C terminal
CFK21_RS10755	SM00267	diguanylate cyclase
CFK21_RS10760	SM00478	endonuclease III
CFK21_RS10765	SM00363	S4 RNA-binding domain
CFK21_RS10795	SM00481	DNA polymerase alpha chain like domain
CFK21_RS10860	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS10860	SM00448	cheY-homologous receiver domain
CFK21_RS10865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS10865	SM00387	Histidine kinase-like ATPases
CFK21_RS10865	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS10885	SM00966	SpoVT / AbrB like domain 
CFK21_RS10920	SM00487	DEAD-like helicases superfamily
CFK21_RS10925	SM00530	Helix-turn-helix XRE-family like proteins 
CFK21_RS10955	SM00530	Helix-turn-helix XRE-family like proteins 
CFK21_RS10965	SM00857	Resolvase, N terminal domain
CFK21_RS11005	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CFK21_RS11005	SM00481	DNA polymerase alpha chain like domain
CFK21_RS11005	SM00483	DNA polymerase X family
CFK21_RS11010	SM00886	Stress responsive A/B Barrel Domain
CFK21_RS11030	SM00100	Cyclic nucleotide-monophosphate binding domain
CFK21_RS11030	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFK21_RS11035	SM00479	CFK21_RS11035
CFK21_RS11070	SM00450	Rhodanese Homology Domain
CFK21_RS11075	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS11075	SM00267	diguanylate cyclase
CFK21_RS11075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS11270	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS11380	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS11425	SM00028	Tetratricopeptide repeats
CFK21_RS11430	SM00028	Tetratricopeptide repeats
CFK21_RS11435	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS11435	SM00448	cheY-homologous receiver domain
CFK21_RS11440	SM00387	Histidine kinase-like ATPases
CFK21_RS11450	SM00100	Cyclic nucleotide-monophosphate binding domain
CFK21_RS11465	SM00479	CFK21_RS11465
CFK21_RS11480	SM00257	Lysin motif
CFK21_RS11500	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CFK21_RS11515	SM00062	Bacterial periplasmic substrate-binding proteins
CFK21_RS11580	SM00479	CFK21_RS11580
CFK21_RS11585	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS11585	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CFK21_RS11585	SM00267	diguanylate cyclase
CFK21_RS11590	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS11590	SM00267	diguanylate cyclase
CFK21_RS11595	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CFK21_RS11635	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CFK21_RS11645	SM00479	CFK21_RS11645
CFK21_RS11680	SM00493	CFK21_RS11680
CFK21_RS11690	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS11785	SM00448	cheY-homologous receiver domain
CFK21_RS11785	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFK21_RS11790	SM00387	Histidine kinase-like ATPases
CFK21_RS11790	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS11790	SM00448	cheY-homologous receiver domain
CFK21_RS11800	SM00091	PAS domain
CFK21_RS11800	SM00267	diguanylate cyclase
CFK21_RS11805	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS11850	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CFK21_RS11860	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS11880	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CFK21_RS11880	SM00534	ATPase domain of DNA mismatch repair MUTS family
CFK21_RS11885	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFK21_RS11885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS11890	SM00260	Two component signalling adaptor domain
CFK21_RS11895	SM00028	Tetratricopeptide repeats
CFK21_RS11895	SM00138	Methyltransferase, chemotaxis proteins 
CFK21_RS11900	SM00260	Two component signalling adaptor domain
CFK21_RS11905	SM00073	Histidine Phosphotransfer domain
CFK21_RS11905	SM00260	Two component signalling adaptor domain
CFK21_RS11905	SM00387	Histidine kinase-like ATPases
CFK21_RS11905	SM00448	cheY-homologous receiver domain
CFK21_RS11910	SM00448	cheY-homologous receiver domain
CFK21_RS11915	SM00267	diguanylate cyclase
CFK21_RS11915	SM00448	cheY-homologous receiver domain
CFK21_RS11950	SM00563	Phosphate acyltransferases
CFK21_RS11960	SM00357	Cold shock protein domain
CFK21_RS11980	SM00852	Probable molybdopterin binding domain
CFK21_RS11985	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS11985	SM00464	Found in ATP-dependent protease La (LON)
CFK21_RS11995	SM00267	diguanylate cyclase
CFK21_RS12010	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS12035	SM00363	S4 RNA-binding domain
CFK21_RS12045	SM00387	Histidine kinase-like ATPases
CFK21_RS12080	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS12080	SM00962	SRP54-type protein, GTPase domain
CFK21_RS12080	SM00963	SRP54-type protein, helical bundle domain
CFK21_RS12085	SM00849	Metallo-beta-lactamase superfamily
CFK21_RS12095	SM01091	Transporter associated domain
CFK21_RS12105	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS12110	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CFK21_RS12110	SM01080	CFK21_RS12110
CFK21_RS12125	SM01005	Alanine racemase, C-terminal domain
CFK21_RS12130	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS12160	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CFK21_RS12170	SM00316	Ribosomal protein S1-like RNA-binding domain
CFK21_RS12170	SM00357	Cold shock protein domain
CFK21_RS12170	SM00955	CFK21_RS12170
CFK21_RS12180	SM00849	Metallo-beta-lactamase superfamily
CFK21_RS12185	SM00788	Adenylosuccinate synthetase
CFK21_RS12200	SM00244	prohibitin homologues
CFK21_RS12205	SM00244	prohibitin homologues
CFK21_RS12225	SM00853	MutL C terminal dimerisation domain
CFK21_RS12225	SM01340	CFK21_RS12225
CFK21_RS12230	SM00257	Lysin motif
CFK21_RS12230	SM00646	CFK21_RS12230
CFK21_RS12280	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS12285	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFK21_RS12285	SM00387	Histidine kinase-like ATPases
CFK21_RS12285	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS12330	SM00530	Helix-turn-helix XRE-family like proteins 
CFK21_RS12420	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CFK21_RS12435	SM00749	bacterial OsmY and nodulation domain
CFK21_RS12465	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS12500	SM00861	Transketolase, pyrimidine binding domain
CFK21_RS12520	SM00479	CFK21_RS12520
CFK21_RS12530	SM00387	Histidine kinase-like ATPases
CFK21_RS12535	SM00448	cheY-homologous receiver domain
CFK21_RS12535	SM00862	Transcriptional regulatory protein, C terminal
CFK21_RS12630	SM00448	cheY-homologous receiver domain
CFK21_RS12630	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFK21_RS12675	SM00986	Uracil DNA glycosylase superfamily
CFK21_RS12675	SM00987	UreE urease accessory protein, C-terminal domain 
CFK21_RS12680	SM00917	LeuA allosteric (dimerisation) domain
CFK21_RS12700	SM00091	PAS domain
CFK21_RS12745	SM00834	Putative regulatory protein
CFK21_RS12755	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS12795	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CFK21_RS12800	SM01400	CFK21_RS12800
CFK21_RS12810	SM00822	CFK21_RS12810
CFK21_RS12825	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS12825	SM01086	C-terminal, D2-small domain, of ClpB protein
CFK21_RS12855	SM00363	S4 RNA-binding domain
CFK21_RS12865	SM00938	Nitrogen regulatory protein P-II
CFK21_RS12875	SM00881	CoA binding domain
CFK21_RS12890	SM00387	Histidine kinase-like ATPases
CFK21_RS12890	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS12895	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS12895	SM00448	cheY-homologous receiver domain
CFK21_RS12905	SM00028	Tetratricopeptide repeats
CFK21_RS12970	SM00957	SecA DEAD-like domain
CFK21_RS12970	SM00958	SecA preprotein cross-linking domain
CFK21_RS12990	SM00864	Tubulin/FtsZ family, GTPase domain
CFK21_RS12990	SM00865	Tubulin/FtsZ family, C-terminal domain
CFK21_RS12995	SM00842	Cell division protein FtsA
CFK21_RS13100	SM00662	RNA polymerases D
CFK21_RS13105	SM00363	S4 RNA-binding domain
CFK21_RS13105	SM01390	CFK21_RS13105
CFK21_RS13170	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CFK21_RS13175	SM01374	CFK21_RS13175
CFK21_RS13195	SM00322	K homology RNA-binding domain
CFK21_RS13210	SM01382	CFK21_RS13210
CFK21_RS13210	SM01383	CFK21_RS13210
CFK21_RS13230	SM01403	CFK21_RS13230
CFK21_RS13240	SM00838	Elongation factor G C-terminus
CFK21_RS13240	SM00889	Elongation factor G, domain IV
CFK21_RS13255	SM00663	RNA polymerase I subunit A N-terminus
CFK21_RS13280	SM00649	Ribosomal protein L11/L12
CFK21_RS13285	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CFK21_RS13285	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CFK21_RS13320	SM00984	UDP binding domain
CFK21_RS13340	SM00829	Enoylreductase
CFK21_RS13410	SM00327	von Willebrand factor (vWF) type A domain
CFK21_RS13475	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CFK21_RS13520	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CFK21_RS13540	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS13625	SM00267	diguanylate cyclase
CFK21_RS13625	SM00448	cheY-homologous receiver domain
CFK21_RS13635	SM00825	Beta-ketoacyl synthase
CFK21_RS13650	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS13650	SM00487	DEAD-like helicases superfamily
CFK21_RS13650	SM00490	helicase superfamily c-terminal domain
CFK21_RS13650	SM00847	Helicase associated domain (HA2)  Add an annotation
CFK21_RS13680	SM00986	Uracil DNA glycosylase superfamily
CFK21_RS13680	SM00987	UreE urease accessory protein, C-terminal domain 
CFK21_RS13720	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS13735	SM01101	CFK21_RS13735
CFK21_RS13760	SM00487	DEAD-like helicases superfamily
CFK21_RS13760	SM00490	helicase superfamily c-terminal domain
CFK21_RS13830	SM01400	CFK21_RS13830
CFK21_RS13860	SM00028	Tetratricopeptide repeats
CFK21_RS13870	SM00937	CFK21_RS13870
CFK21_RS13905	SM00232	JAB/MPN domain
CFK21_RS13910	SM00845	GatB domain
CFK21_RS13960	SM00936	Penicillin-binding protein 5, C-terminal domain 
CFK21_RS14000	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFK21_RS14060	SM00650	Ribosomal RNA adenine dimethylases
CFK21_RS14170	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS14170	SM00091	PAS domain
CFK21_RS14170	SM00267	diguanylate cyclase
CFK21_RS14225	SM01011	Aminopeptidase P, N-terminal domain
CFK21_RS14335	SM00100	Cyclic nucleotide-monophosphate binding domain
CFK21_RS14335	SM00419	helix_turn_helix, cAMP Regulatory protein
CFK21_RS14385	SM00271	DnaJ molecular chaperone homology domain
CFK21_RS14415	SM00100	Cyclic nucleotide-monophosphate binding domain
CFK21_RS14415	SM00450	Rhodanese Homology Domain
CFK21_RS14420	SM00411	bacterial (prokaryotic) histone like domain
CFK21_RS14435	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS14470	SM00271	DnaJ molecular chaperone homology domain
CFK21_RS14530	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS14575	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CFK21_RS14580	SM00861	Transketolase, pyrimidine binding domain
CFK21_RS14600	SM00996	S-adenosyl-L-homocysteine hydrolase
CFK21_RS14600	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CFK21_RS14620	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS14620	SM00448	cheY-homologous receiver domain
CFK21_RS14625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFK21_RS14625	SM00387	Histidine kinase-like ATPases
CFK21_RS14625	SM00388	His Kinase A (phosphoacceptor) domain
CFK21_RS14640	SM00260	Two component signalling adaptor domain
CFK21_RS14650	SM00073	Histidine Phosphotransfer domain
CFK21_RS14650	SM00260	Two component signalling adaptor domain
CFK21_RS14650	SM00387	Histidine kinase-like ATPases
CFK21_RS14650	SM00448	cheY-homologous receiver domain
CFK21_RS14650	SM01231	CFK21_RS14650
CFK21_RS14655	SM00138	Methyltransferase, chemotaxis proteins 
CFK21_RS14660	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFK21_RS14665	SM00260	Two component signalling adaptor domain
CFK21_RS14670	SM00448	cheY-homologous receiver domain
CFK21_RS14675	SM00448	cheY-homologous receiver domain
CFK21_RS14715	SM00732	Likely ribonuclease with RNase H fold.
CFK21_RS14750	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS14770	SM01152	CFK21_RS14770
CFK21_RS14850	SM00052	Putative diguanylate phosphodiesterase
CFK21_RS14860	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS14885	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CFK21_RS14885	SM01232	CFK21_RS14885
CFK21_RS14930	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS14930	SM00962	SRP54-type protein, GTPase domain
CFK21_RS14930	SM00963	SRP54-type protein, helical bundle domain
CFK21_RS14935	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS14945	SM00267	diguanylate cyclase
CFK21_RS14945	SM00448	cheY-homologous receiver domain
CFK21_RS14985	SM00360	RNA recognition motif
CFK21_RS14990	SM00357	Cold shock protein domain
CFK21_RS14995	SM00947	Carbonic anhydrase
CFK21_RS15010	SM00382	ATPases associated with a variety of cellular activities
CFK21_RS15010	SM00448	cheY-homologous receiver domain
CFK21_RS15015	SM00091	PAS domain
CFK21_RS15015	SM00387	Histidine kinase-like ATPases
CFK21_RS15015	SM00388	His Kinase A (phosphoacceptor) domain
