D9T12_RS00015 NONE
        recF    4986 ..    4999 +  -5.3  -2.82623   TGTTTTATCGTTCAT               TTACC GGCC GGTAA                TCCTTATAAAAAGAA  52 206
        gyrB    7595 ..    7618 +  -4.4  -3.11732   AAAAAGCGAAACCTA          ACCGGCCGGT TCAA ATCGGCCGAA           TTACCTGGGTTTCAC  51 167
D9T12_RS00030    8656 ..    8684 +   -14  -5.26875   GGCTGGCATAAAAAA       GCCCCCGCAAGAA TGAT TTCTT-CGGGGGC        TTTTTTCATTCAGCA 100 88
D9T12_RS00055   15826 ..   15836 +  -5.4  -3.84451   ACCTTATCGATATCG                 GTGA CCA TCAC                 TTTCGCTTTGACCGC  61 398
D9T12_RS00110   34462 ..   34473 +  -2.2  -2.96779   GGTTTCAGAATGTTG                GTGA GGTA TCGC                 ATTATATTTTCGAAA  42 440
D9T12_RS00145 NONE
D9T12_RS00175 NONE
D9T12_RS00180 NONE
D9T12_RS00185 NONE
D9T12_RS00190 NONE
D9T12_RS00195   54398 ..   54415 +  -8.5  -3.58533   ATTGCAAAACAAGAA             CTTTACC GGCC GGTAAAG              TTTAAAACGTTATGA  72 76
D9T12_RS00200   55191 ..   55209 +  -2.4  -5.61824   TTCCAGTGACTCCAG             TTCGATTT GCT GAATCGCA             TTTTTTTGAATTTTA  82 458
D9T12_RS00240 NONE
D9T12_RS00245   64258 ..   64269 +  -5.8  -2.54371   TTCTGGTTTGCGCAT                CCCA AATC TGGG                 TCGGTTCGGATAATT  52 85
        polA NONE
D9T12_RS00265   71055 ..   71069 +  -8.5  -5.77632   ATTCACCATTGAAAA               CCGGC ATAAA GCCGG               TTTTTTTATCCTTTT 100 53
D9T12_RS00270   74279 ..   74321 +  -7.7   -2.7641   ACCAGAGGTTCCCTA AACTACCGGCCGGTAAGAA TTCAT TTGTTACCGGCCGGTAAAC CTTTAAACACTTTTT  64 200
D9T12_RS00280 NONE
        ccsB NONE
D9T12_RS00290   79112 ..   79124 +  -6.2  -5.54079   CAAATCATTCAAAAA                CCCC ATTGA GGGG                TTTTTTGCTTTTTGA  91 69
D9T12_RS00295 NONE
D9T12_RS00305 NONE
D9T12_RS00310   83809 ..   83836 +  -4.8  -4.42765   AAAGCTAACAAAAAA        CGCTCC-AATCTC ATT GAGAAAAGGAGCG        TTTACTTTTTTAGAA  68 123
        katG   90304 ..   90320 + -10.1  -5.52347   AATTGATATGAAAAA              CGGTGCT TTG AGCGCCG              TTTTTTGATTTTATT 100 75
D9T12_RS00330   91600 ..   91613 +  -5.3  -3.40051   TAAGTGAGTTAAAAG               CACTA TATT TAGTG                GTTTTTACAATGTTT  57 255
D9T12_RS00335 NONE
D9T12_RS00340   92429 ..   92442 +  -2.3  -3.36492   ACAGCATAAAGATGC               GTAGC GATT GCAAC                TTCTCAAATTCAAAG  45 22
D9T12_RS00355   99221 ..   99233 +  -6.3  -2.61831   GTGTTCAAGTGGCGT                CAATC TTT GATTG                CATTTTTCGCATCGA  54 86
D9T12_RS00370  102559 ..  102607 +  -7.8  -3.01924   GCGGAGTGGGGCTGT TTTCTTTGGTTCATTTCTTTTGC CAGG GCAAA-GAAATGAACGGAAAAAA TATTGGGCAAAAATC  65 278
D9T12_RS00415  111965 ..  111991 +  -5.1  -6.04324   TTAAAACTTCAGAAA         GCGGCACTTTC CTAGT GGAACTGTCGC         TTTTTTATTTTTTCG  95 53
D9T12_RS00420 NONE
D9T12_RS00425  114139 ..  114168 +  -6.5  -3.75629   ACGAAGGTCAATTTA       GCTGAGTGGTT CGTTTGTT AGCCACTTAGC        TTTGCGTTACACGTC  66 271
D9T12_RS00430  114898 ..  114915 +  -5.5  -3.63837   ACAAGTCAATCAACT             TC-GCGCC TAC GGCGCCGG             TTATTGAGGCATTAT  58 48
D9T12_RS00435 NONE
D9T12_RS00440  115805 ..  115818 +  -2.4  -3.29208   AAAACTCTTAACGAT               CTCT TATTTC AGAG                GTTCTTTTCTCTTTT  45 40
D9T12_RS00445  116547 ..  116562 +  -2.5  -3.62756   AAGAGACGTTAATTT              TGGTC AAAGTG GGCCA               TCTTTAATTTGGCAT  48 3
D9T12_RS00450  117422 ..  117437 +  -6.1  -4.87665   AAATACAGCCAATAG              TGGCG ACCTTG CGCCA               TTTTTGTGAGTGCAG  80 516
         gnd NONE
D9T12_RS00480 NONE
         pgl  124599 ..  124635 + -16.1  -4.07885   GACACTTTTTTCAGG    TAAAAAACGCTCGATGA ACT TCATCGGGCGTTTTGTA    TTTTAACGCCAAGTG 100 88
D9T12_RS00500  128569 ..  128594 +  -4.9  -4.08485   AAATTCAACTCATGA         TTAAATACG TAAAAAAC CGTATTTAA          TTTGCTTTAAATAAA  63 22
D9T12_RS00505  130039 ..  130057 +  -2.4  -4.20817   TAGGAAGCCGGAATC             CTTTACCT AAA AAGTAAGG             TTATTTTGGCCTGTC  56 9
D9T12_RS00510  131804 ..  131819 +  -7.6  -4.89567   TAGTTGTTTGGAAAA              GGTTTC ACGT GAAACC               TTTTGTATTTTCACA  89 38
D9T12_RS00520 NONE
D9T12_RS00525  134761 ..  134786 + -14.8   -5.4756   TTAACGCGTAAAAAA         GCCCGAGCTA TATAAC TAGCTCGGGC          TTTTTTATTGCAGTT 100 87
D9T12_RS00530  136132 ..  136142 +    -4  -3.94368   AGTTTTTGCAATAAT                 GAAT TCC ATTC                 TTATGTGTTTTTTAA  56 72
D9T12_RS00535  136841 ..  136852 +  -4.4  -2.85706   AAACCATTGAGGAAA                CTCT ATTC AGAG                 TCGTCTATTTATTGG  48 40
D9T12_RS00540 NONE
D9T12_RS00545  138931 ..  138961 + -13.5  -3.89348   TTCTACCAAAAAAAA      TCGCCAAG-GTTTC ACGT GAAACACTTGGCGA       TTCTTCTATAGAATT 100 135
D9T12_RS00560 NONE
D9T12_RS00565 NONE
D9T12_RS00570  147791 ..  147816 +  -3.2  -4.86621   GAATCTTAATCATGC         GGTACTCGTA GTAATG TGCGAGCGCC          TTTTTGATTAGGAAT  67 86
D9T12_RS00605  157211 ..  157221 +  -2.4  -4.41047   TGTTGGTAGCTCTTA                 GCTC TGA GCGC                 TTTTGATTACGACAT  58 58
D9T12_RS00610  158670 ..  158695 +  -6.8  -5.69262   GTGTATTTTTCGAAG         CCTCCGCATG CAAGTT TGTGCGGGGG          TTTTTGTTTTTGTGA  93 79
D9T12_RS00615  161294 ..  161320 +  -6.6  -4.38748   TCTAGTTTTTATAAA         GCGCTTGCAA CTGTGTT TTGCGAGTGC         TTCTTTGTTTCTCGA  76 130
D9T12_RS00650  169519 ..  169539 +  -2.7  -3.35901   TGCTTCTTGATAAGT            TTTATTTAT TGA ATAAAAAAA            TTAATGATTTGCTTT  46 62
D9T12_RS00655  170582 ..  170608 + -11.7  -5.64274   ACCTAGTCTGATAAA         CGCCAACTGAA TGTTT TTTAGTTGGCG         TTTTTTTATGCCTGC 100 84
D9T12_RS00675  173604 ..  173628 + -14.3  -5.61689   CTCGAAAAACAAAAA          CGCCGCAAAGA TGT TCTCTGCGGCG          TTTTTTATTGCTTTT 100 161
D9T12_RS00695 NONE
D9T12_RS00700  179039 ..  179068 +  -2.9  -4.89009   GATTCTTTCTCAGTT       TTAGGCGTGTATT CAAA AATACACCCTTAC        TTTTTACTTCAATAT  65 102
D9T12_RS00730  185699 ..  185717 +  -4.6  -3.81701   TCGAAAAATAAGTCG             CCGTTA ATTTCGG TAACGG             TTATGTTCATTTGTG  59 201
D9T12_RS00750 NONE
        cmoA NONE
        cmoB  191696 ..  191715 +    -5  -4.42235   TGCAACCCTCACGAA            TAGATACC GGCC GGTAACTA             TTATTTTTGACAATT  68 77
D9T12_RS00765  195407 ..  195430 + -10.4   -5.0133   TATGACGTAAAAAAA          GCGCTT-GAGA AAC TCTCGAAGCGC          TTTTTTAAACAAATC 100 399
D9T12_RS00775 NONE
D9T12_RS00780 NONE
D9T12_RS00785 NONE
D9T12_RS00790 NONE
D9T12_RS00795 NONE
D9T12_RS00800 NONE
D9T12_RS00805  204847 ..  204901 + -11.9   -2.7386   GCTGTTTGGTACTTA GTCGATTCTGAATAACTGGCTTTG CCATAAAT TAAA-CGAGTTATTCAGAATCGAC TACTTAGCCTAGCTT  83 427
D9T12_RS00835  209806 ..  209857 +    -3  -4.53705   AAATGCCGCTTTAAT GCTAGC-AAAGTCGACCGGCCGGTC ATT GATTTGCAAGTCGATTTTCGCTAGG TTTTGTGTAAAAGTT  62 27
D9T12_RS00845  211019 ..  211058 + -15.2  -3.91197   GCGTTACCGAAAATG  TT-ACCGGCCGGTAGACTT TAA AGGTTTACCGGCCGGTTGA  TTTAATCGTTTATAA 100 83
        hemC NONE
D9T12_RS00865  215406 ..  215422 +  -5.1  -2.70907   TATTTTGGATTCGTT              GCAAAGA ATG TCATTGC              CTTGATTCTCTATCC  49 4
D9T12_RS00870 NONE
D9T12_RS00875  218250 ..  218274 +  -9.9  -2.76227   TAAATATTTATTCTA          CCGGCCGGTAA AGT TTCCCAGCCGG          TCAATTTCTATTAAA  75 38
D9T12_RS00895  221709 ..  221750 + -25.5  -4.07687   ATATAACTCTTTAAT CTTAACCGGCCGGTAGAAA GTGT TTTTTACCGGCCGGTTAAG  TTTTGGCAGACAAAT 100 74
        purU  222698 ..  222722 +  -7.2  -5.64421   GTCTTATTTCCAAAA          GGCTCTATGA TGATT TTGTAGAGCC          TTTTTTATTTGGAGT 100 87
D9T12_RS00905  225242 ..  225252 +  -6.8  -2.88212   TGCGAATTTGTCTTT                 GCCT GTC AGGC                 TATGCTGTCGTGATT  57 233
D9T12_RS00925  232341 ..  232351 +  -5.4  -3.65485   CAAAGACTGCTTTTA                 CCAA TGT TTGG                 TCTTCTTTGTCATGT  59 296
D9T12_RS00970 NONE
D9T12_RS00975  241581 ..  241591 +  -4.6  -4.57837   TTGAGGAATTTCATT                 CGGG CCT CTCG                 TTTTTAGGGCGATAT  68 219
D9T12_RS01005  246045 ..  246059 +  -2.1  -4.08767   ATTGCTGTTTATCGA               CGAAG AGTGG TTTCG               TTTTGAGGAAATCAA  53 5
D9T12_RS01010  246698 ..  246715 +  -2.7  -3.78811   ACTTTGCAAGAGAAA             GAGTAAG GTTT CTTGTTC              TTTAAATTCGATTAT  50 20
D9T12_RS01015  247085 ..  247100 + -10.4  -4.81249   AAAACCGCTAAAAAA              GGCCGT TAAA ACGGCC               TTTTTAGGTTTGAGA 100 30
        trmA  257149 ..  257160 +  -3.6  -4.26327   ATTTCTGTTAAAAGA                GGCC GGCC GGTC                 TTGTTTTGATCACTG  61 61
D9T12_RS01050  258114 ..  258140 + -10.8  -5.81032   AATTTTTTATTTAAA         GCAGCCTTTCGA GAT TCGATTGGCTGC         TTTTTTTTACAGTTA 100 62
D9T12_RS01060  259116 ..  259170 +  -9.7   -2.7566   AAGTATAGTTACTTA GTCGGTTCTGAATAACTGGCTTTG CCATAAAT TAAA-CGAGTTATTCAGAATCGAC TACTTACCATTGAAT  75 105
D9T12_RS01065  262261 ..  262276 +  -5.4  -2.99593   CCATAATTTCCTTAT              TGAGTC GACT GACTCG               CTTTAATTGTGAAAT  53 122
D9T12_RS01075  265565 ..  265575 +  -3.2   -3.6215   GATGATCCGCATTTG                 GAGC TAG GTTC                 TTTAGAATGCCTTCC  51 247
D9T12_RS01090 NONE
D9T12_RS01095  269488 ..  269499 +  -4.4   -3.6215   GTATTGCTGATAAGG                CAGA AGCA TCTG                 TTTAAGATCGGTTAG  54 366
        dprA  281927 ..  281940 +  -2.3  -5.40474   TGATGTTCATATTCA               GGGCT GTAC AGCCG                TTTTTTTAAGGCGCT  75 421
        topA  285600 ..  285615 +    -9  -5.46657   ATAATCCTTTCAAAA              TCCACC GGCT GGTGGA               TTTTTTGTTAAACTA 100 205
D9T12_RS01160  287524 ..  287539 +    -9  -5.72622   ACTGCGATATAAGAA              CCTACC GGCC GGTAGG               TTTTTTGTTTATGAG 100 114
D9T12_RS01165  288834 ..  288848 +    -5  -3.62518   ACAGGTGACCTGATT               CGGAAT TTG ATTTCG               TTTAAGGATGTTTGA  57 464
D9T12_RS01175 NONE
D9T12_RS01180 NONE
D9T12_RS01185  292590 ..  292607 +  -4.1  -4.37092   TTCCTTCTCTTTATT             CTTTACC GGCC GGTTAAG              TTTTATGCAAACGGT  63 170
D9T12_RS01190  294201 ..  294222 +  -2.3  -4.76213   GAGAGTCGCAGCAAG           CATGAGGTTG CTA TAGCC-CATG           TTTTGTTCGGTTTCT  66 457
D9T12_RS01205  298324 ..  298337 +  -3.9  -5.41787   TAGTCGACCTGTAAT               TTGAT TTAT ATCAA                TTTTTGTATTTTTTA  78 397
D9T12_RS01210  299541 ..  299579 +  -6.9   -5.2853   AAGCCTTTAATCTAA   GCTTAATTCATTGTTTT TTAAT AAATCAATGGGTTAGGC   TTTTATTTTTGGCTA  95 67
D9T12_RS01215 NONE
D9T12_RS01220  301338 ..  301370 +  -8.6   -5.5112   GATAATATTTTCAAA     CCCAAGTTGAAAGGT GAGA GCTTTTCA-CTTGGG      TTTTTTGTTGATGAA 100 64
        truD  302772 ..  302786 +  -7.2  -3.55548   ATTAATCCATTAATA               TAGTCT GGT AGACTA               TTTCAAAGAGTATTG  67 129
D9T12_RS01230  305790 ..  305821 + -15.3   -5.0916   CGCCGCAACGAAAAA      TGGCCTTGGATGC TGTTGT GCATTCAAGGCCA       TTTTTGTATTCAGCA 100 60
D9T12_RS01255  311237 ..  311249 +  -4.8  -4.11394   AGAGTGGTTATGGAT                GACG AACAA CGTC                TTTTAGCAATGACCT  63 81
D9T12_RS01260  312820 ..  312834 +  -8.6  -3.99779   TTGTTGTCATAGTTC               TCTCTG AGA CAGAGA               TTTGATTCAATTTTG  80 213
D9T12_RS01265  314721 ..  314733 +  -6.3  -4.67607   GGATTAATGATTTTG                TTCAC TGA GTGAA                TTTCTTTATTAAAAG  76 34
D9T12_RS01270 NONE
D9T12_RS01275  316815 ..  316838 +  -4.6  -3.64066   CAAACTGAACCATCG          CAATAGAC-CG ATG CGAGTCGATTG          TCTTCTTGTTTGAGT  57 487
D9T12_RS01295  321340 ..  321362 +  -8.5  -5.55769   CAAGACATAAAAAAA          CCGAGATAGC AGAT GCT-TCTCGG           TTTTTTATTCTGCAG 100 357
D9T12_RS01310  323810 ..  323825 + -10.4  -5.63517   CATGCTAGTTTTAAA              GCCGTC GTAT GACGGC               TTTTTTGTTTGGACG 100 61
D9T12_RS01315  325406 ..  325416 +  -8.2  -4.45259   TCCCCGGTCAATGAA                 GCGG CTG CCGC                 TTGTTTTTCAAGTTT  87 284
D9T12_RS01325  326549 ..  326564 +    -4  -4.19953   TGCGGACTTTGCTTG              TTTGGC GAGA GTCAAA               TTTTCAGGTTGAGTA  61 372
D9T12_RS01350  332169 ..  332182 +  -4.5  -3.83205   GTTAAACACAGCCCT               GCGGT TGGC ACTGC                TTTCATATAGCGAGT  59 228
D9T12_RS01360 NONE
D9T12_RS01365  337334 ..  337359 + -11.3  -5.24129   GTATTCATTCATTTT         TAAAAGCTACC GGCC GGTGGCTTTTA          TTTTTTGTAAAGAAA 100 58
         tkt  339819 ..  339843 +  -7.8   -3.7046   TTATTGAAATTCAAA          CCGGTGGGTA ATCTC TACCGGCCGG          TTTAAAAGTTTTTTA  72 177
         gap  340905 ..  340927 + -13.6  -3.69434   GTTGTACGTCATGTT           GGTAACAACT AAT AGTTGTTACC           TTTGGGGTTCATTCC 100 14
D9T12_RS01380  342521 ..  342538 + -12.7  -4.20883   TAAATTACTTCATGA             GCCAGGC AATC GCCTGGC              TTTTCACACTTTTTA  95 38
         pyk  344191 ..  344202 +    -3  -4.25074   TACCGGCCGGTAGAT                TCTT ATTC AAGA                 TTTTCAGGTTTGGTG  57 73
D9T12_RS01390  345379 ..  345405 +   -21  -5.90981   TACGTTACAAAGAAA         CCGGCCGGTAAA GTT TTTACCGGCCGG         TTTTTTTTCGTCTGG 100 60
D9T12_RS01395  348271 ..  348289 + -11.8  -6.20267   TATTTTTCAAAAAAA             CCAAGGTT GAA AACCTTGG             TTTTTTTGTTTTTAA 100 78
D9T12_RS01400 NONE
D9T12_RS01405  350532 ..  350553 +  -7.3  -3.06183   TCATGAGTTTGTAGT           TTACAAGCC ACGT GGCGTGTAA            TTGAATCAAACTAAA  62 4
D9T12_RS01410 NONE
D9T12_RS01415  354218 ..  354229 +  -7.2  -3.13164   TACACAGGATTTCAT                CCGG CTTA CCGG                 TTAGATGATTGAAAA  63 2
D9T12_RS01420 NONE
D9T12_RS01425 NONE
D9T12_RS01430 NONE
D9T12_RS01435  355418 ..  355429 +  -4.4  -3.52918   CAGTTCTAGCTAAAG                CTGA GTAA TCAG                 TTAGTTTAAGACTTA  55 18
D9T12_RS01440  355776 ..  355787 +  -7.2  -4.36914   CGTCTATAAGTTTAA                GGGC TTCG GCCC                 TTTTCTGAGCCAAGG  79 32
D9T12_RS01445 NONE
D9T12_RS01450 NONE
D9T12_RS01455  356859 ..  356881 + -11.4  -5.86061   TGAATTTTTATAAAG           GGGGATATGT TTT ACATATTCCC           TTTTTTTTAATCGAC 100 56
D9T12_RS01460  358555 ..  358602 + -10.8  -2.62912   TCGTTTTCTTTTAGA ATAACCGGCCGGTAAATGTGT GCATGAA ACA-ATTTACCGGCCGGTAAA CTCTGTATTTTTTAA  78 44
        rdgB NONE
D9T12_RS01470  359974 ..  359993 +  -2.2  -3.42147   TTTGAACTATTTCAA            TTAGAGAT TAAA ATCTATAA             TTCATATTGATTACA  45 108
D9T12_RS01475  360999 ..  361012 +  -3.1  -2.78384   TGGTTATTAAGATTA               GTTGA GTAT TCAGC                TGTAGTGAACACAAA  44 31
D9T12_RS01480  361634 ..  361661 +  -9.3   -5.0916   TCATCATAATGAAAA        CGGCTTC-TAAG TTTGT CTTAAGAAGCCG        TTTTTGTATTCAGGA 100 51
D9T12_RS01490 NONE
D9T12_RS01495  364115 ..  364134 +  -2.8  -3.12923   AGCTGTCTTGGTTGA            CTTGATTG ACTA CAATCGCG             TGTAATTTTAATCCT  44 84
D9T12_RS01515  366936 ..  366968 +   -10  -4.08958   GAGCTTTTGTTGTCG     CGCCAGCGTTTTCACT AGT AGTGA-G-CGCTGGCG     TTGTTATTTCAAGAT  86 52
D9T12_RS01520  367753 ..  367763 +  -3.2   -2.8742   ATTGACTAAGCCCTT                 CTGG TGT TCAG                 TGCTTGGTATTTGGC  44 104
D9T12_RS01525 NONE
D9T12_RS01530  370060 ..  370092 +  -4.9  -3.16683   TCAGGCCATCCAGGC      CTTCAACGTTTTTCT TAC AGAGAACCGTTGAGA      TTGCTAGCATCACCT  53 104
        trpD  371616 ..  371632 +  -3.7  -3.90112   AAGGCTTTTAGGAAA              CTCTGAT TCA ATCATAG              TTTCCTTAGCAGCAA  56 452
D9T12_RS01540 NONE
D9T12_RS01545 NONE
D9T12_RS01550  375598 ..  375618 +  -4.8  -3.02144   AGAGCTTTTATCAGT            CAGTTGAT AATTG ATTAACTG            TATTAGCGCGCATAC  52 12
D9T12_RS01555  377686 ..  377703 +  -4.1  -3.19656   AGACTCTTGAGCATT             CTATACC GGCC GGTAGAG              TTAATAGCTCCGTTT  48 39
        trpC  378667 ..  378702 + -12.2  -3.10701   ATTGCCTCATAAAAT    TTCGTAATGTTTATTT TGCT AAATAAACATTACGCA     TTCACTAAGTATTTG  85 60
D9T12_RS01565  379910 ..  379921 +  -5.8  -5.01732   CATCAATTGTTACTC                GCCA AAGC TGGC                 TTTTTTCAGCAAGTT  82 308
D9T12_RS01575 NONE
D9T12_RS01580 NONE
D9T12_RS01585  385097 ..  385111 +  -2.8  -3.02511   TAGGTGAAAGGTTTT               GATTGC TGA GTAGTC               TGTTAAAAGCATGAA  43 38
D9T12_RS01590 NONE
D9T12_RS01595 NONE
D9T12_RS01600 NONE
D9T12_RS01605 NONE
D9T12_RS01610  391911 ..  391944 + -15.5  -4.03085   AAAGCTCATAAAAAA     CGCCTATTTCTTACC GGCC GGTAAAAAATAGGCG      TTTCGCTTTTTATAA 100 54
        speD NONE
D9T12_RS01640  408627 ..  408638 +  -5.8  -3.94276   GGACAATGCGGAGTT                CCCA TGGA TGGG                 TTTATAACGTCTTTT  65 116
D9T12_RS01645 NONE
D9T12_RS01650  410431 ..  410456 +  -8.4  -5.01422   GAGAAGGTCATAAAA         CCCAC-AATGC ATTCA GCATTCGTGGG         TTTCTTTTTATCTGG  95 66
D9T12_RS01655  411742 ..  411755 +  -3.9  -5.17054   CGTGATTATAGCAAT               TTGAT TCTT ATCAA                TTTTTTACGTATTCT  74 36
D9T12_RS01660  412802 ..  412820 +  -8.9    -4.258   CGGTAACTTTTCGGC             TTGCCGA TTTGT TCGGCAA             TTTGTTGATAAGTCA  86 229
D9T12_RS01670  414482 ..  414493 +  -4.4  -4.33248   CGGATAAACTAACTT                GAGT TCAA ACTC                 TTTGTTATCCGATTC  63 337
D9T12_RS01720  429492 ..  429509 +  -9.8  -4.13748   TAGATTTATGCGTAT             GCCCCG TTTATT CGGGGC              TTTGCTGTTTTTGAG  86 92
D9T12_RS01725  431151 ..  431166 +  -2.6  -2.71503   ATGGATAAACGAAGT              GG-ATAG TGT CTATGCC              TGAGTTGTTGTTGCA  41 20
D9T12_RS01730  432519 ..  432531 +  -4.7  -4.16016   ATTGGCGATATTGTC                CTGCC ATG GGCTG                TTTATTAGCACATCA  63 330
D9T12_RS01745  435268 ..  435284 +  -3.1  -2.78467   ATGGCAGTTTTTAAA              TTTTTTT TAA AAAAAGA              CTTGTCATTTGTAAA  44 27
D9T12_RS01750 NONE
D9T12_RS01755  435593 ..  435622 +  -3.6   -5.1675   TCCAGTTTTTAGAAA       GCTCTCTTGTGAC TTGTT GTC-TAGGAGGGC       TTTTTTAATAAATAC  74 37
D9T12_RS01760  435704 ..  435714 +  -5.4  -4.52214   CAGTTCGATCCTGGC                 TGGA AGC TCCA                 TTTATCTTTTGATTT  70 15
         tuf  437000 ..  437015 +  -3.2  -5.60993   GCACTAGTAAAAAAA              GCGC TGTATAAT GCGC               TTTTTTTATGAAAGC  84 49
D9T12_RS01770  437122 ..  437153 + -14.6  -5.72207   CTGCCATACATATAA      CGACTCGTATTTCT TTGA AGAGATACGGGTCG       TTTTTTTAGTTTAAG 100 35
        secE NONE
        nusG NONE
        rplK NONE
D9T12_RS01790  439432 ..  439453 + -10.3  -3.75015   TACGTAGATGGTCCG           GTTTGATAG GCCA CTATCAAAC            TTTAATGGAGGTTAT  86 169
D9T12_RS01795 NONE
D9T12_RS01800  440418 ..  440440 + -13.4  -4.67635   TAAACAGCATGAATT           GGCTGGCGTT TTT GACGCCGGCC           TTTTCTCGTTTTAAC 100 59
        rpoB NONE
        rpoC  448889 ..  448902 +  -2.3   -3.1458   GAGGTGATGGAATCG               GCACC TGAA GGTGA                TATGTAATTTTTAGG  43 5
D9T12_RS01815 NONE
D9T12_RS01820  449993 ..  450009 +  -9.4  -4.91473   TCATCTACTAATGGA              GGCCCT TTTAC AGGGCC              TTTATTTTTGGCTTA 100 41
        fusA NONE
         tuf  453431 ..  453457 + -10.9  -5.93252   CAGCTACTAGAAAAA         GGGAGTCAAGC ATTTA GTTTGGCTCCC         TTTTTTGTTTTTACC 100 56
D9T12_RS01835  453903 ..  453915 +  -3.4    -4.431   GATGTTCAATTAGAA                TTGC GTTAA GCAA                TTTTGTGGCTCAATC  62 17
D9T12_RS01840 NONE
D9T12_RS01845 NONE
D9T12_RS01850 NONE
D9T12_RS01855 NONE
D9T12_RS01860 NONE
D9T12_RS01865 NONE
D9T12_RS01870 NONE
D9T12_RS01875 NONE
D9T12_RS01880 NONE
        rpsQ  458602 ..  458632 +  -7.1  -2.71791   GTTTTATAGCTTTTA       TTCTGTAAATTAT CTGGT ATAATTTGCGGAA       ATTTAAAAGCCACCT  60 41
D9T12_RS01890 NONE
D9T12_RS01895 NONE
D9T12_RS01900 NONE
D9T12_RS01905 NONE
D9T12_RS01910 NONE
D9T12_RS01915 NONE
D9T12_RS01920  461602 ..  461613 +  -5.8  -3.25113   ACTAGCTGAATCAGC                CCGT GAAA ACGG                 TCTTGAATTTTAAAA  58 1
D9T12_RS01925 NONE
D9T12_RS01930 NONE
D9T12_RS01935 NONE
        secY  464083 ..  464102 +  -6.6  -4.29432   ATCTAAATTGAAAGG            TAAATAAC ATAA GTTATTTA             TTTTCCTAGAATTTA  73 19
D9T12_RS01945 NONE
D9T12_RS01950  464930 ..  464944 +  -2.8  -2.62613   TTGCCGTCCACCTAA               GAAACG TCG CGTTTA               ATATTTGAGGTAAAC  41 10
D9T12_RS01955 NONE
D9T12_RS01960 NONE
D9T12_RS01965  467001 ..  467015 +  -8.5  -5.76633   AATCAGCAAAAAGAA               CCGGC CAAGC GCCGG               TTTTTTTATATCTAA 100 39
D9T12_RS01970 NONE
D9T12_RS01975 NONE
D9T12_RS01980 NONE
D9T12_RS01985 NONE
D9T12_RS01990  477749 ..  477783 +  -6.3  -2.78679   CAGCAACGCATAACA     AACACCGGCCGGTAG AAACC TTACCGGCCGGTCAA     CTTTGAATGAGACAG  55 45
D9T12_RS01995  478967 ..  478983 +  -7.2  -4.73682   GTCAATCCAAGACAA              CGGGGC ATAAA GCCTCG              TTTTGTGTTCTACCG  83 87
D9T12_RS02000  486797 ..  486807 +  -5.4  -2.52464   CTAATTGTTGTCCGA                 CAGA GAA TCTG                 TCGCTTGAAGAAGAG  49 305
D9T12_RS02015 NONE
D9T12_RS02020  494538 ..  494551 +  -8.1  -3.14229   GAAGTGTATTAAGTT               CACGC GATG GCGTG                TGTTGATGAAAATAT  69 29
D9T12_RS02025  496484 ..  496499 +  -2.5  -3.89215   GCCGGTAAGTTTATT              GCGTT GAGAGA AGCGC               TTTAAGTTTATGCCA  52 101
D9T12_RS02035 NONE
         ssb  499736 ..  499751 + -10.4   -5.4492   TAAAGATGCTAAGAA              CCCCGT AATT ACGGGG               TTTTTTGTGTCTGTA 100 66
D9T12_RS02045  502631 ..  502647 +  -3.7  -4.65895   AAGCTTGAGAAACCA              TCTGATT CGT GGTCAGA              TTTTTAAATGAACGC  66 2
D9T12_RS02055  504244 ..  504279 + -14.8  -2.72043   TGATTTTATAAGAAG    ATTTACCGGCCGGTAG AGAT TTACCGGCCGGTAGAG     ATTTAGCGGCCAGTT  95 56
        rplU NONE
D9T12_RS02070  506276 ..  506302 + -15.9  -5.38054   TTTGCAAATGAAAAG         CGCCCTACCGA TATTT TCGGTGGGGCG         TTTTTGTTTGTGGAA 100 56
        cgtA NONE
D9T12_RS02080  508876 ..  508894 +    -6  -2.88366   TAGTGGTATTAGTTC             ATCGTAAC GCA GTTACGAC             CTTGTTGCTTGGAAG  55 70
        rdgB NONE
D9T12_RS02140  528905 ..  528918 +  -5.3   -2.6621   AATCCACACGATTTA               TTACC GGCC GGTAA                GTATTTGAATGTGAT  51 40
D9T12_RS02145  530219 ..  530234 + -10.4  -3.71321   CCCAAACGCCATGAC              CGAGGC GGTG GCCTCG               TTGTTCGAATTTCGT  82 115
D9T12_RS02155 NONE
D9T12_RS02160  532468 ..  532488 +  -4.8  -4.50627   CAAACAAAATGTTTT           TCTGCCTAA ATTT TTAGGC-GA            TTTCTTTGCTAACTA  68 69
D9T12_RS02165  533787 ..  533816 + -10.1  -5.16151   TGCAAATGTGTTCTT       GATAAACGTTACC GGCC GGTAGCGTTTTTC        TTTTTCTTAAATTTC 100 73
D9T12_RS02170  534374 ..  534384 +    -4  -3.88583   ATTAGATTGAACACA                 TTTC ATA GAAA                 TTTCTGAAAAATTTA  56 40
        groL  536268 ..  536306 + -12.7  -3.06671   TTGTCATGCTAGGTA  GCTTCCTTACCATCA-CCC GAC GGGATGGTGGTAAG-AAGC  TATTCCCATCCGTCT  88 239
        ltrA  539180 ..  539198 + -13.2  -5.24129   AGTTCTCTGAAAAGA             CCGGCATT TTT AATGCCGG             TTTTTTGTGGGCAGA 100 289
D9T12_RS02200  550439 ..  550466 +   -10  -2.79655   TGGCCTTTGCTCCTT        TTTTCG-CCTTGG TTG CCAAGGACGAAAG        CTTCTGTCTGTGTGA  72 139
D9T12_RS02210 NONE
D9T12_RS02215  555133 ..  555150 +  -2.7  -5.63103   GAGTATTATAAGGGT             TTTGACC GGCC GGTAAAA              TTTTTTTAGTTGAAA  81 202
        purU NONE
D9T12_RS02230 NONE
D9T12_RS02235 NONE
D9T12_RS02240 NONE
D9T12_RS02245 NONE
        glnT NONE
D9T12_RS02255 NONE
D9T12_RS02260 NONE
D9T12_RS02265  565670 ..  565683 +  -3.1  -3.35438   CGGGAACAAGTTGGG               TTCCT GGTA AGGAG                TTCTAAGCTGTCATG  48 6
        folD  566578 ..  566590 +  -2.7   -4.2142   TAGTATTATTTTTTA                GTAGA CCG TTTAC                TTCTTTTGCCATGTT  57 38
D9T12_RS02275  567543 ..  567577 +  -7.8  -3.55761   TGTCCGGTGTGAGAA     GTGGTCGTTCGGTCTG AGT CTGTCCGAATGATTAC     TTTGGCAAATGAATG  69 225
D9T12_RS02320  578410 ..  578421 +  -4.4  -2.79131   AGTCGACTATGTGGT                TTGC ATTG GCAA                 CTTTCAAATAATTTT  48 48
D9T12_RS02325 NONE
D9T12_RS02330 NONE
D9T12_RS02335 NONE
D9T12_RS02340 NONE
D9T12_RS02345  583506 ..  583542 + -13.9  -2.85069   AAAATATAGACGTTG    TTTAAGGAATCTCCGGT TGA ACCAGAGGTTCCTTAAG    TGCTCTTTAGGGATT 100 21
D9T12_RS02350  584140 ..  584177 +    -2   -5.2189   CTTCAGGGTTTTTTT   CTA-AGTAGCGCTGGTG CTCTT CTTCAGCGCGATTGTAG   TTTTTTAGTGGTTCG  71 115
D9T12_RS02385  590586 ..  590596 +  -5.4  -3.67149   ATCCCATCGGAGGAA                 CAAG GAT CTTG                 CTTTTATTTTGGTCA  60 76
D9T12_RS02390 NONE
D9T12_RS02395 NONE
D9T12_RS02400 NONE
D9T12_RS02405 NONE
D9T12_RS02410  595796 ..  595817 +  -8.9  -2.79796   TATGCTTTGGATACA           TTATTTACC GGCC GGTAAATAA            TGTACTGAAATCACC  69 8
D9T12_RS02420 NONE
D9T12_RS02425 NONE
D9T12_RS02430 NONE
D9T12_RS02435 NONE
D9T12_RS02440  603645 ..  603659 +  -2.8  -3.25918   CCAATGGATGAAAAA               GCATTT GAA AAACGC               TATATTTAAAAATTA  45 2
D9T12_RS02445  606014 ..  606029 +  -6.2   -3.3506   TATGATTTTGCAAAA              TTTACC GGCC GGTAAA               TTATGAACATTTCAC  59 143
        gcvH  606530 ..  606558 +  -4.7  -5.93252   CTTATTTTTTTAAAA       GATGAGTCGGTA AAGGAC TGCC-ACTCATC        TTTTTTGTTTTTAGC  91 70
D9T12_RS02455  607762 ..  607790 +  -2.9  -3.54177   GTTATTTTTTAAAGT        CGGTGCCAGCTGG TAA CCGGCCGGTAAGG        TTGATTGGTTTTCGA  48 10
D9T12_RS02460  609114 ..  609138 +  -6.5  -3.10012   TTTGGCAGGTTCATT          GCCCAAGAA GGTTTAG TTTTTGGGC          TTAACTCATCGAATT  60 10
D9T12_RS02475 NONE
D9T12_RS02480  612647 ..  612661 +   -10  -2.76227   TTGTACAATTGATTT               TGCCGT TTG ACGGCA               TCAATTTGTGTTAAC  72 148
D9T12_RS02495  615068 ..  615095 +   -10  -4.82901   TGTTATCAATTTAAA        CTCGGCAA-GGAA TAT TTCTTTTGCCGAG        TTTTTATGGGAAAGC 100 41
D9T12_RS02520  619691 ..  619714 +  -9.6  -5.47431   CAAAAAGGAGATAAA          GCCCGAGTAG TCAA TTACTTGGGC           TTTTTTATGTGTTGA 100 169
        ppk2 NONE
D9T12_RS02535  622009 ..  622026 +  -9.1  -5.46657   TTGAAGTCCGTCAAA             GGTCAGC CATT GCTGGCC              TTTTTTATTGCCATA 100 125
        purE  640864 ..  640893 +  -2.1  -2.97131   TCTGACAAAACCGTA       GTGGTTGGCATTT GATA GAATGCGCACTAC        GGTTTTTTATTTGGA  42 61
D9T12_RS02620  642245 ..  642263 +  -6.8   -3.2352   TTCCATAAGCCCCAT             GATGTTTT TTG AAAACGTC             TTACATTAGATTTTG  61 248
D9T12_RS02625  645284 ..  645313 +  -5.7  -4.14874   AGTACTTGGGTATTT       TTGACGGTATGAC GGCT GTCAGGCCTTCAA        TTTTCGCAATATTAT  68 101
D9T12_RS02645 NONE
D9T12_RS02650  650366 ..  650378 +  -3.3  -4.10657   CCAAATTTATCATTT                CTGCG TTG CGAAG                TTTTGCAAGGTCTAG  57 217
        plsY  651721 ..  651763 + -15.3  -3.19192   TGAGAAGGTTGTTTT CTC-TCGTTTATTTCTTTGT CAGG ACAAAGAAATGAACGAAGAG TTGACTTCGATAAGC 100 199
D9T12_RS02670 NONE
D9T12_RS02675  653949 ..  653972 + -11.8  -6.02919   ACTTCGGTAAAAAAA          CCCACAAGTA GAAA TGCTTGTGGG           TTTTTTTGTTTGTAG 100 53
D9T12_RS02680  656041 ..  656055 +  -2.7  -4.59773   GGCTTAGGTGCAACC               GAGCC AGAAC GGCAC               TTTTTCAAACTCAAC  62 143
        rpoD  657925 ..  657953 +   -19  -5.61596   TCGAGCAAAAAGAAA        CCGGCCGGTAAA TAATT TTTACCGGCCGG        TTTTTTTATGCCAAT 100 55
D9T12_RS02760  673045 ..  673070 + -11.1  -4.40572   AATCAAAAGAAAAAA         GCGCCAAAGGG TAAT TCCATTGGCGC          TTTTCTCAGAGTTGT  95 65
D9T12_RS02780 NONE
D9T12_RS02785  683855 ..  683888 +    -9  -2.86288   TGTATTTGATGATTT     CGTCCTTTGTCAAA CATCGC TTTGATAATGGACG      CTTTAATAGGATTTA  69 82
D9T12_RS02790  684905 ..  684923 +   -11  -3.14989   GATTCTATTTTTTAG             GGTTCAGC GAG GCTGAGCC             TCTACTTTTATAGGT  80 53
D9T12_RS02795  685859 ..  685876 +  -2.7  -4.39386   TTTAACATAAACAAT             TGCGTTA GATT TAACGAA              TTTTGCTACTTTCCA  59 383
D9T12_RS02840  695384 ..  695423 +  -8.6  -3.01712   GTAGTTTGTCGAAAA  TTGACCAGAGGGTCGAAT GTCT GTTCGACTCTCTGGGAAG   TATTAGAAACCAAGA  70 45
D9T12_RS02855  698314 ..  698324 +  -3.2  -3.93256   GAAATATTACTTTGT                 GTTG TGC CGAC                 TTGTTTCACAATATC  56 186
D9T12_RS02865  700111 ..  700126 + -11.8  -5.14477   CAATAAATCAATATG              GCCCGC TTAT GCGGGC               TTTTTTGACTGTGTA 100 46
D9T12_RS02870 NONE
D9T12_RS02875  702066 ..  702080 +  -2.8  -5.40072   TTTTCCGCCACTATT               TTTACG AAT CGCAAA               TTTTTTTAAACGAAC  76 404
D9T12_RS02885 NONE
D9T12_RS02890 NONE
D9T12_RS02895  708655 ..  708665 +  -6.8  -4.44608   TAAGTAAGGTGATTC                 CGTC AGT GACG                 TTATTTTTAACTGGG  76 241
D9T12_RS02965  724364 ..  724377 +  -3.9  -2.56288   AGTCAATTCATAAAC               TCATT GATC AATGA                TCCATTAAGTAATTT  45 12
D9T12_RS02970  726799 ..  726809 +    -4  -3.69681   TGATTACTTTCCTAT                 TGAA TTT TTCA                 TATTTGGTTTATTCA  54 181
D9T12_RS02980 NONE
D9T12_RS02985  731344 ..  731359 +  -2.6  -5.03314   AACAATTTCCTTGCA              TAAAGT TTGC ACTTTG               TTTTTTCACAATAGA  68 121
D9T12_RS02990  731904 ..  731934 +  -6.7  -4.30987   AAAATTAAAAAATCA       CCGCCGTTTGGTT TCGCT GGCCATTCGGCGG       TTTGTTATGGAACCT  73 49
D9T12_RS02995  733024 ..  733034 +  -5.4  -4.08064   TGTTCGCCATCCATG                 GCTT ACA AAGC                 TTTTAAAAACGCATT  65 277
D9T12_RS03010  735828 ..  735842 +  -8.6  -3.25088   TGATCACCGGCATAG               TGACCA AAT TGGTCA               TTAATAGATTTGAAA  69 363
        nudE NONE
        cysQ  741547 ..  741558 +  -4.4  -3.40331   GTTTTAAATCAGAAA                TTGG AATA CCAA                 GTTTTTGAATCCCTT  51 258
D9T12_RS03050  747838 ..  747870 +  -4.1  -3.67976   GCACAAGAAACGAAG      GGAATCTGTTTGCTT CAG AAGCATGGAGCTTCC      TTTAAACTTGCTGGA  54 98
D9T12_RS03055  748988 ..  748999 +  -4.4  -4.58395   CTTTGGTTTGAATGT                CTTC TAGT GAAG                 TTTTTACCGAATCGA  68 356
D9T12_RS03090  755012 ..  755029 +  -4.2   -2.6027   TCAGGATTTTTTACC             TGTCTT AACTTA AAGACA              TCAATTGCGTTTTCA  45 421
D9T12_RS03105  762297 ..  762331 +  -6.3  -2.78679   CAGCAACGCATAACA     AACACCGGCCGGTAG AAACC TTACCGGCCGGTCAA     CTTTGAATGAGACAG  55 45
D9T12_RS03110  763515 ..  763531 +  -7.2  -4.73682   GTCAATCCAAGACAA              CGGGGC ATAAA GCCTCG              TTTTGTGTTCTACCG  83 87
        queA NONE
D9T12_RS03120 NONE
        yajC  766299 ..  766312 +  -9.5  -4.89567   GAATTCACGAAGAAA               GGGGC ATTT GCCCC                TTTTGTCTTTTACAG 100 45
        secD NONE
        secF  769382 ..  769395 +  -2.4  -4.84918   TTCCTGCCTAGGTTA               CTCT TTAATT AGAG                TTTTATATTTGTAAC  64 110
D9T12_RS03140  771311 ..  771337 + -19.6  -5.64421   TGCAAAAACTCGAAA         GCCAGTGATGGA AAA TCCATCACTGGC         TTTTTTCTTTAAGCT 100 52
D9T12_RS03145  772719 ..  772743 +  -3.8  -2.71364   ATAATTCACCGGCCG         GT-AGATTTAA TCAT TTAAATCTCAC          TAATTAAAAAAGTCA  45 108
D9T12_RS03190  780348 ..  780361 +  -2.3  -4.56597   ATGGGGTATTAACCC               ATCGC TTAC GCGAG                TTTTTGCACAAAGAA  61 29
D9T12_RS03195 NONE
        mlaE NONE
        mlaD NONE
D9T12_RS03210  783174 ..  783191 +  -2.7  -3.15231   GATAAAAACCAGCAA             GTTTTGG CGAA CTAAAGC              GTTTTGCATATGTCA  45 11
D9T12_RS03215  783467 ..  783483 +  -5.2  -3.51478   CCTCGAAAACACGTT              TGAACT TGAAT AGTTCA              TTCATTCTCTCATGT  57 13
D9T12_RS03220 NONE
D9T12_RS03225 NONE
D9T12_RS03230  785510 ..  785524 +  -4.3  -3.70478   ACTCAAACGCCATAA               CAGAA TCACT TTCTG               TTTCGATGAATTTAT  57 26
        murA  786805 ..  786826 +  -2.4  -4.15044   GGCGCCGATATTATT           CGACTTTCT GAATA AGAAA-TCG           TTTATTACCGGCCGG  53 11
D9T12_RS03240 NONE
        hisD  788860 ..  788880 +  -6.2  -5.70829   GTGAACTTTAAGAAA           GCCACTAGA GAAA TC-AGTGGC            TTTTTTTATGGTGTT  91 75
D9T12_RS03250  789897 ..  789925 + -10.4  -4.53034   ACTTATTTCAGTTTT        TTGGGGGCTTAT GTAGA ATAAGTCCCCGA        TTTTGCTTGTGTACA  95 113
        petA NONE
D9T12_RS03260 NONE
D9T12_RS03265  792499 ..  792524 + -14.1   -5.5074   CGGTATCTTTACAAG         CCCTGTAATGG TTTT CCGTTACAGGG          TTTTTTATTGGGTTA 100 56
        radA  793938 ..  793953 +  -3.3  -4.09649   GCAACAAGCTTTAGA              TGCAA TCTGAT TTGCA               TGTTTTTGTGGTGTA  57 16
D9T12_RS03275 NONE
D9T12_RS03280 NONE
D9T12_RS03285  800324 ..  800344 +  -6.1  -3.61356   CTCAATGATGTGCAT            CGCCATTTT GGG AGAAAGGCG            TTTAAAGTCAATAAT  63 402
D9T12_RS03305  804930 ..  804955 + -12.7  -4.43397   AATTGCTTGTAAAAA         GGCGTGATTAT GGGT ATAATCGCGCC          TTCTTTATTTTCCCC 100 225
D9T12_RS03310 NONE
        rimM NONE
        trmD  806699 ..  806724 +  -2.5  -2.80612   TCGGATTCAACCTCT         GGCGTCACCAA ATTT TTGGTAATGGC          GTTATTAAAGTTGGA  42 111
D9T12_RS03325  807176 ..  807199 +  -4.4  -5.76633   GCTTTGCAAAGAAAA          CTCCCTTGGT TTTG GCCTTGGGAG           TTTTTTTATGTCTAA  86 52
        xerD  808397 ..  808418 +  -4.5  -4.30978   TTGTTTGGTGGCTTC           TATGCCA TTCAGGTT TGGCATA            TTTTCGTCCATTAAA  66 255
D9T12_RS03345  812441 ..  812471 + -14.1  -5.00642   CGTAAAAAAACAAGA      CCGGCCGGTAAGTT ATAT AGC-TACCGGCCGG       TTTTTGTGTGCATTG 100 60
D9T12_RS03365  818081 ..  818092 +  -7.2  -3.19157   TTTACTTTAAATCTC                GCCC GAAC GGGC                 TTAATCAAGTTCATC  63 151
D9T12_RS03370  819946 ..  819975 + -10.9  -5.31275   AGATAAAAATGACAA       GCCCATTTTGA AGCCAGAG TCAAAATGGGC        TTTTTTGTGCTAACC 100 95
D9T12_RS03390  823609 ..  823623 +  -2.8  -3.54743   ATTTTCACATATTTA               TAGTCT TTC AGGCTG               TTCTGCTTGATGATC  48 152
        glnE NONE
D9T12_RS03400  831083 ..  831099 + -12.3  -5.63517   ATTGGTAATAAAAAA              CCCGCTT TGT AAGCGGG              TTTTTTGTTTCGAAG 100 131
D9T12_RS03410  835198 ..  835209 +  -2.2  -3.44622   TCGTCAACGTATGCG                TCGT AAAT ACGG                 TTCATTGTAGGAGTG  45 4
        pstA  836865 ..  836875 +  -2.4  -4.18018   AGCTTTAGAGCATTA                 AGCC TTA GGCG                 TTTTAACTGCGAAAA  53 25
        pstB NONE
        phoU NONE
        phoB NONE
        phoR  840631 ..  840668 +  -6.9  -2.76466   ACCGGATAACCAAAC   AAAAACGGCCGGTTAAG AAAA CTTAACCGGCCGGTAAA    TAACTTTGGTTTTGT  61 121
        pstS  843577 ..  843620 +   -22    -4.386   CGATTATTTGATACA AAAAGAAACCGGCCGGTAGA GTTT TCTACCGGCCGGTTTTTTTG TTTTATGGAAAGTTC 100 48
D9T12_RS03450  846285 ..  846301 + -10.9  -3.85891   ATAGTGGGAGAGGGT              GCCTCAA ATT TTGAGGC              TTTCCTGACTTTTTA  89 37
D9T12_RS03460  847649 ..  847672 +  -9.6  -5.05505   GATTGTGATGTAAAG          CCCAGTGC-CG ACT TGAGCACTGGG          TTTTTAGTTTGTCAT 100 100
D9T12_RS03470  848801 ..  848817 +  -2.9   -4.0641   GGGCTCTTCTTGTTC              TGTTTCC TCT GGTAACG              TTTCTGTCGCTGCAA  55 146
D9T12_RS03505 NONE
D9T12_RS03510 NONE
D9T12_RS03515 NONE
D9T12_RS03520  859591 ..  859606 +    -4  -4.03078   CGTTCAGTACTGTTT              TAGCCA ATTT TGGTTA               TTTATCATCTCGTGC  58 183
        minC NONE
        minD NONE
        minE  861750 ..  861767 +  -8.4  -4.64844   CTGATTGATTCCAAA             CCCGAC GATTTA GTCGGG              TTTTGTGTCTCTCAC  88 53
        yaaA  862606 ..  862618 +  -2.7  -2.70354   ACTTTTTTAATGGCA                TTTCA GAG TGGAA                TAGGTTTATGACAGC  41 52
D9T12_RS03545  863361 ..  863377 +  -5.9  -3.05539   TATGAGAGATTAATC              GATGATT TCA AATCGTC              CTTATTTAATTCGTG  56 28
D9T12_RS03550  863865 ..  863880 + -11.8  -5.18355   GTTCAGTTCATGAAA              GGCGCC AATC GGCGCC               TTTTTGGTTTTTGGC 100 55
D9T12_RS03585  870913 ..  870962 + -18.1  -3.95449   TGGGTGTTTTGGATC TTTACCGGCCGGTGAAAACTG TTTACTGT CAATTTTCACCGGCCGGTATA TTTAATGTATTGTAA 100 68
         ggt NONE
D9T12_RS03600  874396 ..  874413 +  -4.2  -3.35597   AAATCCATCGATTTC             CAATGA GATTAA TCATTG              TGTTTGAAAGATAGA  53 174
D9T12_RS03605  874924 ..  874962 + -15.5  -3.75707   TAGAGGTTCCCTAAA   TAACCGGCCGGTAAA GATCATTAA TTTACCGGCCGGTTG   TGTTTTGGCTCTTTG 100 72
D9T12_RS03625 NONE
D9T12_RS03630  881407 ..  881417 +  -3.2  -5.58179   CTGTTGGGCTTAGAA                 CTTC TCG GAGG                 TTTTTTCTTATGGTG  79 117
D9T12_RS03635  884227 ..  884256 + -10.9  -4.90917   TCAATCTTGAGTCAC       TTGTCGCAGGA-AT TTC ATCTCCTGCGGCAA       TTTTTCATTGAATTT 100 122
D9T12_RS03640 NONE
D9T12_RS03645  886556 ..  886571 +  -7.6  -4.08557   TTAAAAATCGTTGCG              CGCATT TGTG AATGCG               TTGTTGTTTGCCCAA  76 483
        rsmI  889766 ..  889776 +  -5.4  -3.34244   GTCTAAGATGAGCAA                 GTCA TAA TGAC                 TCTCTTTATAAAATG  55 303
D9T12_RS03680 NONE
        rnpB  893640 ..  893652 +  -2.7  -4.88405   TCTTATCTTACATTC                TCTAG TGT TTAGA                TTTTGTTTGGGAATT  65 62
        mraZ NONE
        rsmH NONE
        ftsZ  897278 ..  897313 +  -9.2  -5.49809   GTAATTGATGATGTT    GGACACTCAAATATCA ATTT TGGTATTTGAGTGTTG     TTTTTTTAACGTTTA 100 55
        ftsL NONE
D9T12_RS03710 NONE
D9T12_RS03715 NONE
D9T12_RS03720 NONE
D9T12_RS03725 NONE
        murD NONE
        ftsW  907174 ..  907186 +  -2.7  -4.11484   ACGCAGTAAGCGCGA                TTTTC GTT GAGAA                TTTTAAACGCTTGAA  55 16
        murG NONE
D9T12_RS03745  909377 ..  909400 +  -5.4  -3.25088   AATAACGACGTATAA          GGTTAAATTG ATAA TAATTTAGCC           TTAATAGATTTGAAA  55 266
D9T12_RS03750  911503 ..  911543 + -13.4  -4.59773   ACATTTTTAAGAAAG  CAATACCGGCCGGTTTGA CTCAA TTTAACCGGCCGGTATTC  TTTTTAGCCCTCCAA 100 61
D9T12_RS03755 NONE
D9T12_RS03760  913391 ..  913403 +  -4.9  -2.97392   TTTGATTTATCTCAA                TTCAT CGA ATGAA                TAATATTTTAATATG  52 95
D9T12_RS03765 NONE
D9T12_RS03770  917924 ..  917935 +    -3  -4.24606   AGCCCATTAACGGAT                TCAA TTCA TTGA                 TTTTGGATATGGCTT  57 14
D9T12_RS03775  918878 ..  918896 +  -4.6  -5.10029   TAAAGGCCAAAAGTA             GTACAAAT TGT AATTGTAC             TTTTTTGACATTCGT  80 367
D9T12_RS03790 NONE
D9T12_RS03795  922227 ..  922239 +  -3.4   -3.1247   TTAAAACCTTGGAAA                CTCT ATGGA AGAG                TTCGGTCTGAAGACT  47 77
        sufB  923839 ..  923856 +  -6.3  -2.72144   GGTTCCGTCGGCTAA             GATGCTT TTCA AAGCGTC              GTTTCAGGGAAATAG  54 26
        sufC NONE
        sufD NONE
D9T12_RS03815 NONE
D9T12_RS03820  928004 ..  928021 +  -2.7  -3.56593   GAGAAATCTCTTCAC             TCGATTA TCTG TATTCGA              TTATCATTATGCCCT  48 135
D9T12_RS03825  929451 ..  929465 +  -2.8  -3.08738   AATGCTCCCACAATC               GCCA TTGGATT TGGC               TTAAGTGCCGTTATT  43 7
D9T12_RS03830  930541 ..  930554 +  -3.1  -2.91395   CACTTTCAATAAACC               TTACC GGCC GGTGA                ATTTATGACAAACGT  44 79
D9T12_RS03835 NONE
        ftsA  932692 ..  932711 +  -9.3  -5.95539   ATTGTTTAACTAAAA            CCCGCAA ATTCAA TTGCGGG             TTTTTTTGTTTCCGA 100 65
D9T12_RS03845  933901 ..  933918 +  -8.5  -5.69262   TTTTTATGCACCAAA             CTTAACC GGCC GGTTAAG              TTTTTCTTTTTCTAC 100 85
        secA  937232 ..  937259 +  -6.3  -5.26875   AAGCTGAATCCAAAA        CCCATCGTGTGT CATGA AC-CTCGATGGG        TTTTTTCGTTAGGAG  89 52
        argJ  938609 ..  938620 +  -5.8  -3.61889   AGATTACTCTGGTTC                GCCA TCCG TGGC                 TTTCCAAACTTTTTC  61 147
D9T12_RS03870  941286 ..  941299 +  -2.3  -4.29493   GTTTGAATGGTTTTG               GCGAC TGGT GTCGA                TTTATCTGTTTGCTC  58 497
D9T12_RS03885  946151 ..  946165 +  -3.6  -4.10731   GGTCGGGAATTAAAG               TTGGTA TGC TATCAA               TTTACTTATATTATT  58 96
        grxD  946620 ..  946645 + -11.9  -5.78622   TTCAAGTCACAAAAA         CGCCATACTGG ATTT TCAGTGTGGCG          TTTTTTTTGGCCTGA 100 52
D9T12_RS03905  950630 ..  950654 + -10.7  -4.37886   AATTTTAGTTTTTAA          CGCCAATAGTG TTA CTCTGTTGGCG          TTTTATCAAAACTCA  95 33
D9T12_RS03910  951122 ..  951137 +    -9  -5.76633   CTTATCTTATAAAGA              CCCAGA TTAT TCTGGG               TTTTTTTATGTCTGC 100 62
D9T12_RS03940 NONE
D9T12_RS03945  956152 ..  956175 +  -6.1  -2.86124   TATGATTTGCCATTA          GCAATGTAT TTTAAT GTACATTGC           TGCTCTTTAGATGGA  55 83
        pssA NONE
D9T12_RS03955 NONE
D9T12_RS03960  959469 ..  959488 +  -4.2  -4.79953   TTGGCTAAGCCCCTG            CGGGCGTAG CTT CAAC-CCCG            TTTCTTTGTTGTTGT  71 218
        rimI  960554 ..  960567 +  -5.3   -4.8048   CCGGTCGCCATTAAA               GAGTT TTCC AACTC                TTTTTGCTCTGAAAC  75 491
D9T12_RS03975 NONE
        cysE  962946 ..  962958 +  -2.7   -3.0894   TTGAGTAGTTTAGAA                GGTTA TTG TAATC                TTAGCTCAATCATTG  43 156
D9T12_RS03985  963542 ..  963558 +  -5.2  -6.15259   TTTTGATGCAATTGA              TTCTCA TTTGT TGAGAA              TTTTTTTTTAAATTC 100 57
D9T12_RS03990  963976 ..  964005 +  -8.7  -4.85599   GCTTGTTGAGAACGT       TAGAAACCTCAGA AACT TCTGGGGTTTTTG        TTTTTCTGCAGTCAA 100 63
D9T12_RS03995 NONE
        rlmN NONE
D9T12_RS04005 NONE
D9T12_RS04010  967635 ..  967650 +    -9  -2.75064   CCAAACTTTTACATT              CCTGTG ATAA CACAGG               TGCTTAACTGAACAA  68 105
D9T12_RS04015  968317 ..  968328 +  -4.4  -3.15699   TGGCTTGGCTGAAAT                TCAG TTAG CTGA                 TATTGCTCAATAACT  51 1
        bamB NONE
         der  971297 ..  971322 +  -7.7  -5.50313   ATTAATTATTTTATG         GCCTTTGTT-GT GAA ACTGACAAAGGC         TTTTTTCGTTTTCTC 100 86
D9T12_RS04030  975299 ..  975324 +  -8.4  -5.60993   AAGCGCAATAAAAAA         CGCCAGCACTT TTTAT AAGT-CTGGCG         TTTTTTTATCGAAAA 100 60
D9T12_RS04045  976663 ..  976674 +    -3  -3.69437   TGGTTTGAGTATGTT                TCTT TATG AAGA                 TTCGTTTTCAAATTC  50 78
D9T12_RS04065  980360 ..  980376 +  -4.5  -6.20267   TAATTTCGCGCTTAA              CTTTTTA TTT TGAAAAG              TTTTTTTATTTTTAA 100 190
D9T12_RS04070 NONE
        ilvN  982798 ..  982816 +  -6.7  -4.57073   TTTTGATTAACCTAG            CG-CCGCA GCTA TGCGGGCG             TTTTTAGAAAGGATA  78 148
        ilvC  983962 ..  983976 +  -8.5  -6.09196   TGAATGTTTGAAAAA               CCGGC TATAT GCCGG               TTTTTTTGTTTTAGG 100 135
D9T12_RS04085  985372 ..  985385 +  -3.7   -4.4009   GGCGTTATACGGCAT               CGCTC GAGT GTGCG                TTTTCTACCGTAAGC  63 93
D9T12_RS04090 NONE
D9T12_RS04095 NONE
D9T12_RS04100  990604 ..  990627 +    -8  -3.18199   AACAATTCACTCAAC          CCGACCGCGC TAAC GCGTGGCTGG           TTAGCTTAAACGTTA  66 45
D9T12_RS04105 NONE
D9T12_RS04110  992387 ..  992401 +  -2.8  -3.39327   ACCCGACCGCGCTGC               CGGTTA GCT TAAACG               TTATGAATATCGAGA  46 52
D9T12_RS04115  992851 ..  992878 +  -2.6  -3.52652   AAATTTAACAAGCCA        GCCACGGCGA CGTTTTTT TCGTTGCGGC         TTCTCCTTCACTACA  48 41
D9T12_RS04120  994631 ..  994647 +  -2.2  -3.14132   TTGCCAAATGAAGGG              GAAGGC CAATC GCCTTG              TTAATGAGAGCCGCC  43 5
D9T12_RS04125 NONE
D9T12_RS04130  996589 ..  996599 +    -4  -2.72096   AAATATGTACTTTTT                 GAAA TTT TTTC                 CTTGTAATTCCTGAG  45 309
D9T12_RS04135  997046 ..  997070 + -14.4  -6.04953   CGAATTTGTTAAAAA          GAGGCCTAGA TTCGT TCTAGGCCTC          TTTTTTTATTTATAT 100 75
D9T12_RS04140  997894 ..  997907 +  -2.5  -3.92592   CGATGTCAGCATGAT               TAAAA ATAA TTTTA                TTTGCTATTGAAACT  52 162
        trpB  999248 ..  999262 +  -5.6   -4.9725   TAACTTTTTATAAAA               CCGGTG CAA TGCCGG               TTTTTGTATCGAAAT  78 66
D9T12_RS04150 1000505 .. 1000516 +  -2.2  -3.59402   TGAATTCTCGAAGTA                GTTG GTCT CGAC                 TTAGTTTGATATGCG  49 213
D9T12_RS04165 NONE
D9T12_RS04170 1002432 .. 1002447 +  -7.5  -5.46129   TTTGAAGAGTGAAAA              CCGGC TTAGAT GCCGG               TTTTTTCGTTTCTTA 100 292
D9T12_RS04175 NONE
D9T12_RS04180 1006538 .. 1006553 + -10.4  -5.61596   TTACCCACAAAAAAA              CCCAGC TTGT GCTGGG               TTTTTTTATGACCGT 100 102
D9T12_RS04215 1014214 .. 1014225 +  -4.4   -3.2505   GAAGAGTTTAAACAG                CAAC CCAA GTTG                 TTAAATTAATGTTTC  51 5
D9T12_RS04245 NONE
        thrS NONE
D9T12_RS04255 1022122 .. 1022138 +  -3.6  -4.33417   TATAGATTTCTGGTG              CAGCTC CCTCA GTGCTG              TTTGTTGTCCCTAAG  61 78
D9T12_RS04260 1022418 .. 1022433 +  -3.2  -2.60194   GTAGCAATGGTTCGC              CGTATG CTAC CTTACG               CTTAATTGAGGAGAT  43 5
D9T12_RS04265 1022837 .. 1022865 +  -9.6  -5.71712   TTAGTCAAAAAAAGA        TAGGGAGTCTAC CTTGA GTGGTCTCCCTA        TTTTTTTGTCTAGAA 100 52
D9T12_RS04270 NONE
D9T12_RS04275 NONE
D9T12_RS04280 NONE
D9T12_RS04285 NONE
D9T12_RS04290 NONE
D9T12_RS04295 1028179 .. 1028189 +    -4  -4.29396   CTTGTTCAATTATTA                 TCAA AAT TTGA                 TTTTGGTCAATAATT  61 347
D9T12_RS04315 NONE
D9T12_RS04320 1033258 .. 1033275 +  -2.7  -3.99917   ATCTTTTACTCCAAA             TTGGAAA ATCA TTGCCAA              TTTGTAAGGTTTTTT  52 44
D9T12_RS04325 1034231 .. 1034275 + -21.7  -3.30159   GATTGTTTGGCTTGA TTTTCACCGGCCGGTGACTTT ATA AAAGTTACCGGCCGGTAAAGA TTATGGCGCGATTGA 100 63
D9T12_RS04335 NONE
D9T12_RS04340 NONE
D9T12_RS04345 1039801 .. 1039814 +  -2.4  -4.29432   AAGTGGAACAAGACA               CTCA ATTTTA TGAG                TTTTACTAGAGTTTA  56 3
D9T12_RS04355 1041692 .. 1041713 +  -5.3   -4.7219   ATAACTCGCCATATT           CAATTATTT ATGT AAATGATTG            TTTTCTCTTACTCTC  75 238
D9T12_RS04360 1042548 .. 1042590 +  -6.6  -3.07655   CTTTAGTTTTATTCA TATTTGCTGATTCACA TCTGTCTTTTC TATGAATCAGCAAATA ATCTTTTTTAAAGAG  60 45
D9T12_RS04370 NONE
D9T12_RS04375 1045234 .. 1045261 +  -8.4  -5.80951   CGGCCGGTAGAAAAA        CGCCCAACAGAA AAAA TCCTATTGGGCG         TTTTTTATTTTAGGT 100 183
D9T12_RS04390 1049797 .. 1049812 +  -7.6  -4.57569   GGTTTTTGACGACTC              CCAGAT AGCC ATCTGG               TTTTTCACCCACTAA  82 224
        gloA 1053821 .. 1053839 +  -7.4  -3.85552   AAATTGAATTTATCG             GTGCGGAT CAC GTCCGTAC             TTAATTTTTAGGTTT  71 3
D9T12_RS04415 1054247 .. 1054273 + -15.2   -4.4267   GGTTCTCTAAAAAAG         CGCCGAGTCAGG TTG TCTGATTCGGCG         TTTTGCGTTTTAGCC 100 81
D9T12_RS04420 1056351 .. 1056379 + -13.3  -5.27923   GTCTGGCAAGAAATC        GCTCCGTTGATTT TCT AAATCAATGGGGC        TTTTTTATAGGCTTA 100 258
D9T12_RS04425 NONE
D9T12_RS04430 NONE
D9T12_RS04435 1061055 .. 1061079 +  -6.6   -3.3334   AACCAATATGCAGGT         GAATTGACGTT AAGT AACG-CAATTC          TTCTGGGCTACGGTT  61 164
D9T12_RS04465 1066818 .. 1066833 +  -4.7  -4.62783   TTGGCGGTGACGTTC              TGCCA CCTCTT TGGCA               TTTTTCGCATGGGTA  71 222
        murI 1069525 .. 1069541 +  -2.9  -4.11484   GGCAGGATGTGGAGA              CTGTTGG AAT CTATCAG              TTTTGAGCGATTAGA  55 3
D9T12_RS04510 1077445 .. 1077487 +  -8.7  -4.68994   GTCAATCTTAGGTGG ACTCAGTCTAAAATCTA AATGTTTAA TGGATTTTAGACTGAGG TTTTTCAGTACTGCT  90 49
D9T12_RS04525 NONE
D9T12_RS04530 1080966 .. 1080985 +  -5.1  -4.38116   CGTATAATTTGAATT            TTATACG GTAAAG CGTATAA             TTTGATTTTTATACG  68 83
D9T12_RS04535 NONE
D9T12_RS04540 1082806 .. 1082820 +  -6.4  -3.31726   TTTTTCAAGCAATAC               CATGGT TTC GCCATG               TGTTGTGTGAGCAAA  59 197
        leuC NONE
        leuD NONE
        leuB NONE
D9T12_RS04570 NONE
D9T12_RS04575 1089417 .. 1089439 +  -3.6  -3.05597   AAACAGTTTTAAGAA           TTTAAGTTTT TAG AAAAATTAAA           GTTTTAAGGAATAAG  47 51
D9T12_RS04580 1090526 .. 1090547 +    -6  -3.11289   TAGGTGTAATAAGTG           TTTGCTTA GGAGTA TAAGCAAA            TAATTTTCGCCTTGA  58 64
        truA NONE
D9T12_RS04590 NONE
        trpB 1093357 .. 1093370 +  -2.4  -3.73775   TATGCCCACTTTAGC               CTTG TCTTTT CAAG                TTTCGTAACACTAAA  49 115
D9T12_RS04600 NONE
D9T12_RS04605 NONE
        folC 1096584 .. 1096598 +  -2.1  -4.10161   GATCATATATTAGGA               CAGTC TTAAT GATTG               TTTTCGAAGATGATA  53 17
D9T12_RS04615 1097298 .. 1097312 +  -3.6  -2.93853   AAAACAGATAATGGA               TTTTTG AGT CAAAGA               ATTTAATTAAAAGAG  47 30
D9T12_RS04620 1098890 .. 1098904 + -12.8  -2.69725   TATAAAAATATCCAG               GCCGGC AAA GCCGGC               GGTTTATTTTTGGAA  85 57
D9T12_RS04625 1100165 .. 1100184 + -10.8  -5.47159   TTTGAAAATAAAAAA            GCCTTGTT TTAT AACAAGGC             TTTTTTGTGTTGAAA 100 53
        rlmE NONE
        hflB 1103394 .. 1103409 +  -8.2  -5.64274   TTCAGAAGATGAAAA              CCTCGC TTTT GCGGGG               TTTTTTTATGAATGA 100 53
        folP NONE
D9T12_RS04650 NONE
D9T12_RS04655 NONE
        secG NONE
D9T12_RS04665 1106922 .. 1106947 +  -9.8  -4.91852   GGCACCAAATTCGTA         CTGCTGTTTG CTCGTT CAGACAGCAG          TTTATTTTTGCTAGA 100 34
D9T12_RS04670 NONE
D9T12_RS04675 NONE
D9T12_RS04680 NONE
D9T12_RS04685 NONE
        nuoE NONE
        nuoF 1111548 .. 1111579 + -14.6  -2.83271   AAACGTGATCGGAAC      CGATAAAGCGCAAT TTTT ATTGCGCTTTTTCG       TGCTTATCGGGGTGA 100 39
D9T12_RS04700 NONE
        nuoH NONE
        nuoI NONE
D9T12_RS04715 NONE
        nuoK NONE
D9T12_RS04725 NONE
D9T12_RS04730 NONE
        nuoN 1121351 .. 1121377 + -10.9  -5.31456   ATGAGGTATTATAAA         GCCCGCACA AAAAATCGA TGTGCGGGC         TTTTTTATGAATTAA 100 90
D9T12_RS04740 1122141 .. 1122172 + -10.4  -5.79595   TCAGAGGTTCCTTAA      CCTTGGGTTATGAAT GAC ATTTATA-CCCAAGG      TTTTTTATTTTAAAA 100 431
D9T12_RS04745 NONE
D9T12_RS04750 NONE
D9T12_RS04755 NONE
D9T12_RS04760 1128357 .. 1128385 + -15.4  -5.18643   AAATCTTAAGTGATA       CCGGCCGGTTGAA AGTT TTCA-CCGGCCGG        TTTTCTTTTAATTAC 100 58
D9T12_RS04765 1131394 .. 1131416 +    -7  -3.76413   GTTCCATTTCAAGGC           TGGATTGCGA CAT TTGCACTCCA           TTTAAGGTTTTAACC  67 393
        mutL NONE
        miaA 1147832 .. 1147844 +  -6.3  -3.09772   CGATTTGCTTGAAAT                TCTGA GGG TCAGA                CTTTTGAAAGTTTGA  56 202
D9T12_RS04850 NONE
        hflX 1149646 .. 1149663 +  -4.1  -4.35926   GAAGGGAAATAAAAT             CGTTACC GGCC GGTAAGG              TTTTAAATTTACGAT  63 29
        hflK NONE
        hflC 1151932 .. 1151969 + -15.1  -3.54935   GTCAACAACAATAGT   TGAATAAAAAAGGTGGG GTAA CCCACCTTTTTTATGCG    TTTAAGAGAGCTTTG 100 27
D9T12_RS04870 NONE
D9T12_RS04875 NONE
D9T12_RS04880 1154845 .. 1154867 +   -15  -5.83211   TTGATAAACAAAAAA           GGCTGAGAAT TTA ATTCTCAGCC           TTTTTTGTTTTAATG 100 60
D9T12_RS04890 1157454 .. 1157490 + -16.1  -4.07885   GACACTTTTTTCAGG    TAAAAAACGCTCGATGA ACT TCATCGGGCGTTTTGTA    TTTTAACGCCAAGTG 100 73
D9T12_RS04925 NONE
D9T12_RS04930 NONE
        greB 1165962 .. 1165975 +  -3.1  -2.90349   CACCTTGTCTAAAAC               TCGTT GTGA AACGG                CTTTACGTTTGAGCA  44 131
D9T12_RS04985 1176571 .. 1176595 +  -7.2  -4.98531   TTGAGAGGTGAAAAA          GGGTTTGC TTTAAGGTT GCAAACCC          TTTTTGATTTGAAAC  85 98
        cobU NONE
D9T12_RS05005 1180709 .. 1180719 +    -4  -4.85782   ATTTCGTAACTCGTC                 TTTG ATG CAAA                 TTTGTTTTTGAGAAG  69 32
D9T12_RS05010 NONE
D9T12_RS05015 1182534 .. 1182549 +  -3.2  -5.41746   TAAAACAAGCACTTT              GCTACC GGCC GGTAAC               TTTTTTTGAACGATT  82 114
D9T12_RS05025 1184922 .. 1184971 + -12.3  -5.60993   TAGTGTTTAATTAGA CGGCTTTTTATCTTGCAAGCGGG TTAT TCCGGTTGAAAGGTGAAAAGCTG TTTTTTTATGAGAAA 100 93
D9T12_RS05030 1187597 .. 1187622 + -12.5  -5.71983   TTAGGTTATCAAAAA         CCACCGACTGG GAAA CCGGCCGGTGG          TTTTTTTATGCTTGG 100 87
D9T12_RS05040 NONE
D9T12_RS05045 NONE
D9T12_RS05050 NONE
D9T12_RS05055 1193266 .. 1193277 +  -2.2  -3.08133   ATTAGATTTAAAAAG                GCGA TACA TTGC                 TTAAATACATCACTC  42 49
D9T12_RS05060 1193885 .. 1193895 +  -2.6  -4.46675   AATTATTAATGATTA                 TTTA AGA TAAA                 TTTATTATCTTCACT  60 436
D9T12_RS05065 1194487 .. 1194501 +  -2.8  -3.25166   GCGGCCCGTCACTAC               GACATG TTG CATTTC               TGGTTTTTCAGATAA  46 243
D9T12_RS05080 NONE
D9T12_RS05085 1201167 .. 1201196 +   -18  -6.28401   ATGTTTGAATAAAGC       TACCGGCCGGTA AAAGAA TACCGGCCGGTA        TTTTTTTGTTTTTTA 100 63
D9T12_RS05095 NONE
        folD 1205798 .. 1205817 + -10.8  -6.24157   AATAAATATAAAAAA            CCACTTCA CTTG TGAAGTGG             TTTTTTTTTATGGAT 100 61
D9T12_RS05115 1210566 .. 1210578 +  -3.3  -5.14563   TAACTCGTTTAATTT                ATGGC AAA GCCAG                TTTTTTACTCAACAA  73 56
D9T12_RS05120 1212886 .. 1212900 +  -3.6  -5.47821   TTTAACCCATTGATT               CAATTG CTT TAATTG               TTTTTTTGGGTCACT  84 111
         mpl 1218963 .. 1218979 +  -4.5  -3.34983   TAACCTTTAGAAAAA              TGAATTT ATT AGATTCA              TCTTATATAGATTCC  53 119
D9T12_RS05150 1221599 .. 1221615 +    -3  -4.60713   TTTGACAGTTTTTTA              GGTTTT CTAAC AGAACC              TTTTATACTATTTTC  62 316
D9T12_RS05155 1222519 .. 1222536 +  -8.4  -4.19238   CTATTCGTTTTATCA             GCCCTC TTTTTT GAGGGC              TTTTAGGCTTAGAAA  81 48
D9T12_RS05160 NONE
D9T12_RS05165 1224951 .. 1224978 +  -4.2  -3.30124   TTTTTCCATAAACTC        TTTGGAGGGT TTCGCATC GCCTTCCAAA         TTGTCGGCGCTAAAG  51 279
        hrpB 1228037 .. 1228051 +  -4.2  -4.62069   TGAATCAGATTAATT               TCTGGC AAC GCCAAA               TTTTTCAGGTCAAGG  68 73
D9T12_RS05180 1230573 .. 1230583 +  -5.4  -5.51353   TTTAAAGACAGGTGA                 CATC TCT GATG                 TTTTTATTATTTTTG  88 83
        ilvA 1240689 .. 1240735 +  -4.5  -5.09762   TGCAGTCACGTTAAA TTTATTACCGGCCGGTA TCTTTTGAATTTT CACCGGCCGGTAAGGAA TTTTATTTGTTCCGC  76 27
D9T12_RS05265 NONE
         hda NONE
D9T12_RS05275 1248459 .. 1248495 + -21.8  -3.57792   CATCTCATTCTATTT    CGCAAAAAGCCCAGCC AATTA GGTTGGGCTTTTTGCG    TTTCGGGCTACATGG 100 116
D9T12_RS05280 1249233 .. 1249247 +  -4.3  -2.79501   TAAGAGTCGTATGAG               GGTTT GTTGA AAACC               TGTAGTGAGACTGTG  48 46
D9T12_RS05285 NONE
D9T12_RS05290 NONE
D9T12_RS05295 NONE
D9T12_RS05300 1252800 .. 1252821 +  -3.7  -3.54543   GCAAATTGGTAATCT           GCAAGCTCTT CTC AAGAGCA-GC           TTTAAAAACATCGAT  52 70
D9T12_RS05310 1254921 .. 1254932 +  -4.4  -2.57244   TACAAGATCTTCCAT                GATC GCTC GATC                 TCGGTTCATCCATGA  47 88
D9T12_RS05325 NONE
D9T12_RS05330 1263658 .. 1263670 +  -4.7  -2.58686   ACATCAATATTATCG                GGCAC CTT GCGCC                ACTTTTCTATAGAGT  48 332
D9T12_RS05340 NONE
D9T12_RS05345 NONE
D9T12_RS05350 NONE
D9T12_RS05355 NONE
D9T12_RS05360 NONE
D9T12_RS05365 1272512 .. 1272531 + -11.4  -4.09685   GCCACACAGTAAAAA            GCCGCAGT CGTA GCTGCGGC             TTTTAAACAGTGAGA  91 132
D9T12_RS05390 1278479 .. 1278491 +  -5.5  -3.18366   GATTCGTTTGTTGAA                CGTGC TAA GCATG                TCTATTAATTAAAAA  55 5
D9T12_RS05395 1278948 .. 1278968 +    -2  -4.80737   TTTTCGATTAATTTA           GA-AAATTC CTAA GAATTTATC            TTCTTTTTTGTATTG  64 174
         fur 1279995 .. 1280027 + -16.3  -5.10163   TCAGTAACGTTTTAA      CCGGCCGGCCACA AACATAA TGTGACCGGCCGG      TTTTGTTTTGAGGTT 100 57
        grpE NONE
        dnaK 1285858 .. 1285908 +  -7.2  -4.03234   ATTTAACCCTTTAAG TTAATAAACCTAAGCTGTTGCACA GTT TATATAATGGTTTAGGTTTATTAA TTTCTATAAAAAACG  73 285
        dnaJ NONE
D9T12_RS05435 1287953 .. 1287970 +  -9.1  -5.48213   TTATGAAGAAATAAA             CGCCTCC TTTT GGAGGTG              TTTTTGTTTTAACTA 100 56
D9T12_RS05440 1288855 .. 1288884 +  -8.5  -5.71712   TAAAATTCTTAAAAA       CGGAGTGAGCTCT GATG GGGGCTGGCTCCG        TTTTTTTATATGCGG 100 227
        carA NONE
        carB 1293395 .. 1293418 +  -8.8  -5.45802   TGGCCTTTCTACTAA          CGCTGGCGCT TTAG GGTGTCAGCG           TTTTTGTTTTCAAAA 100 74
        greA 1293914 .. 1293924 +  -3.2  -3.10537   CTATGAAATCCTTGA                 GGTG GAA TACC                 TGTAATTTTCGGGTA  45 10
D9T12_RS05460 1294520 .. 1294535 +  -7.5  -5.56264   AAAGTTTTCGGAAAA              CCGGC TTTATT GCCGG               TTTTTTGTGTTTAAA 100 93
D9T12_RS05465 1295363 .. 1295373 +  -5.4   -3.4071   CTGAGGAAATTGCTT                 GGTT AAA AACC                 TTGTAAATAATTATT  57 9
D9T12_RS05470 NONE
D9T12_RS05475 1296907 .. 1296918 +  -4.4  -5.25735   TGGTTGGTGTGGTGA                TTCG ATAA CGAA                 TTTTTGGTTTTTTGC  81 169
D9T12_RS05495 1302664 .. 1302676 +  -2.7  -3.01125   TACGTAAGCTGTATA                TTCAG TGC TTGAA                TGGTTTATAAAGCAT  43 51
D9T12_RS05500 1303397 .. 1303412 +  -8.2  -5.56673   AAACGTTACAAAAAA              CCGGCT GAAT GGCCGG               TTTTTTATTGTAAAT 100 49
        prfB 1305531 .. 1305560 + -10.1  -4.07568   CAGTTCATCCTGAAG       GCTCTCACTGCACA TCT TGTGCTGTGA-AGC       TTTTGAAAACAACAA  86 85
        lysS 1307298 .. 1307322 + -17.3  -5.32699   GAACCTTTTTGAAAA          CCGCTTTGAGA ACA TCTCAAAGCGG          TTTTTTACTATTTAG 100 56
D9T12_RS05520 1310487 .. 1310506 + -13.6  -5.61881   AGTGTTTCAAAAAAA            GGCCAGCA TCAT TGCTGGCC             TTTTTGTTTTTAACC 100 52
D9T12_RS05530 1312600 .. 1312641 +  -5.3  -4.64334   AATGTATTTCACCGG CCGGTTACTTAATTATTCA AAAG TGAATAATTTAGTGACGAG  TTTTCTTACAAGGTT  73 83
D9T12_RS05540 1315124 .. 1315142 +  -7.6  -3.47011   TACTTCCTAAAATAG             TTAAAGTT GAA AACTTTAA             TTAATTCAATTTTTA  69 3
D9T12_RS05545 1316832 .. 1316845 +  -9.5  -5.66229   GTCTGAAAATGAAAA               GGGGC TTTT GCCCC                TTTTTTATTGTTGGT 100 194
D9T12_RS05550 NONE
        lepB NONE
D9T12_RS05560 NONE
D9T12_RS05565 NONE
        recO NONE
D9T12_RS05575 NONE
D9T12_RS05580 1323267 .. 1323280 +  -3.1  -3.06686   GGTTCGTGTCCAAAG               TTGGT TGGA GCCAA                TGATTTCTATGCAAT  45 42
D9T12_RS05585 NONE
D9T12_RS05590 1326068 .. 1326081 +  -3.1  -2.54371   CTATTTAATGATTTA               TTACC GGCC GGTAG                ACTTTCTTTAGGGCA  43 33
D9T12_RS05595 1326709 .. 1326723 +  -6.4  -3.52896   TAACCAGCCCAAGAT               CTGATG GGT CATCGG               TTATATCACTAATAA  61 240
D9T12_RS05620 1332212 .. 1332238 +  -5.2  -2.76737   TAATCGGTTTAAATA         TTTAAATCCTGT TGC ACAGGGCTTGAA         ATTTAACGCTTAATC  50 38
        clpS NONE
        clpA NONE
D9T12_RS05645 1340073 .. 1340114 +    -6   -2.8585   AGGGATAGATTAACC GGCCGGTAGAG-ATTCATT GGTAA AATGAAGGCTCTATCGGCG ATTTAGATTAGATCG  55 196
         acs 1342284 .. 1342311 +  -9.2  -5.66684   CTAACGCTTAATGAA        CCGGAGTTTGGT AAGT ACTGAATTCCGG         TTTTTTTATACCTTA 100 63
D9T12_RS05655 NONE
D9T12_RS05660 1344407 .. 1344432 + -16.3  -5.31877   TCTAGTCTTAAAAAA         GGGAGCTAAAC AGTC GTTTAGCTCCC          TTTTTTGTGCTCAAT 100 54
D9T12_RS05665 NONE
D9T12_RS05670 1347143 .. 1347172 + -14.5  -3.96216   CGGGTGCTCAAATTT       TAAAAAACCCCGT TTTT ACGGGGTTTTTTG        TTATTTAAATCCACA 100 139
        rimP 1347653 .. 1347666 +  -3.8  -3.45073   GATTTAATTGAAAAA               GCCA ACCTTG TGGC                TGTGTTTTAGTCGAT  50 2
        nusA NONE
D9T12_RS05685 1351799 .. 1351821 +  -9.9  -5.54907   ACCGTTACTTTATAA           TGCCTCATC AATTC GATGGGGCA           TTTTTGTTTTATAAG 100 146
        rbfA 1352315 .. 1352343 +    -3  -2.57463   TCATCTATAAAGGTA        AGGCACAGTCCA TCCTT TGGACTGCACCA        CTTGTCAAACAGATT  41 94
        truB NONE
D9T12_RS05700 NONE
D9T12_RS05705 1354760 .. 1354788 + -11.1  -4.86773   TCCTCTAAAACGTAA        GCCTTGGTGAT AAAAACA ATCACCAGGGC        TTTTTCATAGTTTTA 100 66
D9T12_RS05710 1358051 .. 1358069 +  -3.2  -5.54192   TTTAAACTCGATTGG             TCAAAC CTAAAGT GTTTGA             TTTTTTTAAATTAAT  79 81
D9T12_RS05715 1358484 .. 1358507 +  -8.2  -6.02919   TAACTGGCAATGAAA          CCCGC-AAAGT TTT GCTTTCGCGGG          TTTTTTTATTTCTGA 100 79
D9T12_RS05720 1359313 .. 1359330 +  -8.4  -5.50313   TTATGCTTTTTAAAA             CCCAGC CTAAGC GCTGGG              TTTTTTCGTTTTATG 100 59
         pnp 1361736 .. 1361753 +  -9.9  -5.38047   CAACCTTTTAAAAAA             GCCATTC TATT GAATGGC              TTTTTTGTATAAGTC 100 51
D9T12_RS05730 1364886 .. 1364903 +  -5.6  -5.37593   GACTCTTTCAAAAAA             GCCAAT AATTTA ATTGGC              TTTTTTCGTTTAGAA  86 59
D9T12_RS05755 1370099 .. 1370112 +  -6.7  -3.51232   CTATGTTACAAATTG               CTCCA GACT TGGAG                TTGGTTTAGAAAAAG  64 3
D9T12_RS05765 1374722 .. 1374747 + -11.9  -5.71983   TGATTCACAAAAAAA         CCGGGTAACGT GTTA GCGTTATCCGG          TTTTTTTATGCTTGG 100 56
        uvrC 1378062 .. 1378075 +  -6.7  -3.67517   GTCTACCAATTTCGC               CACCT GGGC AGGTG                TTTAGCATGTTGCTA  65 318
D9T12_RS05815 1382379 .. 1382395 +  -2.3  -4.37013   GTACGCAGTGTATTT              TTCAAAA AGT TTGTGAA              TTTTCCTAATTCATT  58 0
        rimO 1383887 .. 1383936 + -21.9  -2.98169   CTATATTGAACTTGG CT-AAGGAACCTCTGTTTGAATCA ATT TGATTCAAACAGAGGTTCCCTGAG TCTGTAAATTATTCA 100 22
D9T12_RS05825 NONE
D9T12_RS05830 1386154 .. 1386181 + -12.1  -3.12684   CCCTCCATGGTTACT        CATCGTAGCAC TTCCAT GTGCTACGGTG         CTTTTCAATGACTTT  87 93
D9T12_RS05835 1386516 .. 1386535 +   -10  -5.36441   TAATTAAATAATCAA            GCCTCAAG TTAT CTTGGGGC             TTTTTTGTATGGAGA 100 57
D9T12_RS05840 1387535 .. 1387547 +  -4.9  -2.72829   ATAGTTTGCGTAAGT                TTCAA CTT TTGAA                CTTTGGACAAATATG  48 199
D9T12_RS05850 NONE
        cysM NONE
D9T12_RS05860 1393336 .. 1393350 +  -6.4   -4.1585   ACTCGTTTAAGTGTT               TCTTCC CTT GGAAGG               TTTTCAACCTTGTGG  70 131
D9T12_RS05865 NONE
D9T12_RS05870 1396526 .. 1396539 +  -5.3  -3.51365   AACTTACCGTTGAAC               TTAGG TTGG CCTAA                TTATGTAACATGTCA  58 121
D9T12_RS05875 NONE
D9T12_RS05880 NONE
D9T12_RS05885 1399094 .. 1399106 +  -7.7  -4.57837   ATTTGTAATATAACT                TTGCC AAT GGCAA                TTTTTCGACCAATAT  82 213
        nagZ NONE
D9T12_RS05900 1401771 .. 1401800 +  -9.3  -3.36823   AGGAAAAAATAAACT       TACCGGCCGGTAA GCTT TAACTGGCTGGTA        TTCAGTTTTACCAAA  76 39
D9T12_RS05910 1404295 .. 1404309 +    -5  -4.16205   AGTCATTAGTCCAAG               CTGGAT CGA ATTCAG               TTTGATTTAGTTCTA  63 84
        thiC NONE
D9T12_RS05925 NONE
        thiS NONE
D9T12_RS05935 1409746 .. 1409760 +  -5.7  -4.03885   CGGTCGCCAGTTGCG               TGACC ATGAA GGTCA               TTAATTTTTTTGAAA  66 452
D9T12_RS05960 1417717 .. 1417727 +  -2.6  -2.61582   AATCATTATTGAGAT                 TTAA GAG TTAA                 GTTATACCTGAAATG  41 159
D9T12_RS05965 1419149 .. 1419166 +  -6.2  -6.28631   TACTTCAGAGAAAAA             CGCTCC AATTCA GGGGCG              TTTTTTTTTAGTTTA 100 72
D9T12_RS05970 1419901 .. 1419915 +  -4.4  -3.11988   TTCAAAAAATGAATC               TAATAA CCT TTATTA               ATTTATTAACTACGG  51 10
D9T12_RS05975 NONE
        lolD NONE
D9T12_RS05985 1423892 .. 1423913 + -11.7  -3.73224   TCTTAGGTGAAAAAA           GACTTTACC GGCC GGTAAAGTC            TTTAATAACGCATAA  91 85
D9T12_RS05995 1425887 .. 1425930 +    -7     -6.13   CAAAGATAGCTAAAA CTTAATTTCGATAATGAAAC AAAC GTTTTGTTGTTGGAGTTAAG TTTTTTTTTGCCTGT 100 87
        clpP NONE
        clpX 1428036 .. 1428051 + -10.4  -5.31275   TCTTTCAATCAGATG              CCCAGC GAAA GCTGGG               TTTTTTGTAATAAAG 100 72
D9T12_RS06010 1430626 .. 1430638 +  -2.7  -4.20883   ATTGGGTTCTGCTCA                TCATT AAT AGTGA                TTTTAAGCGTTTTTC  57 19
D9T12_RS06015 NONE
D9T12_RS06020 1431245 .. 1431255 +  -2.4  -2.74488   GCCCAGTATCACCCA                 CCAC GGA GCGG                 TAGTTCAGCTGGTTA  40 23
D9T12_RS06025 1431337 .. 1431352 +  -7.6  -5.24129   GCCATATTTTTGAAA              TGAGTC TTAG GACTCA               TTTTTTATGCAACAA  93 37
D9T12_RS06030 NONE
D9T12_RS06035 NONE
D9T12_RS06040 NONE
D9T12_RS06045 1431824 .. 1431849 + -12.7   -5.4833   CCGCCATCATTCAAA         GCCACTTAGGA ATTT TCTTAAGTGGC          TTTTTTATTGCCTAA 100 35
D9T12_RS06055 NONE
D9T12_RS06060 NONE
D9T12_RS06065 NONE
D9T12_RS06070 1439677 .. 1439698 +  -3.7  -3.89346   TCGCCCTTGATTCAT           TATTAGCCT TATA GGGCGAATA            TTTATGGCGTGGAGA  56 83
        gyrA 1444769 .. 1444804 +  -5.6  -2.83788   AATAATTATTTAGAA    GGGCTAA-GATGTTTTT GCT ACAAACATCATTAACCC    ATTCTTGAATTAAAT  52 36
        serC 1445945 .. 1445986 + -19.1  -2.90496   CATACTTCGCAATCC TTAAAGGGCAACGATTTTT TTAG AATAATCGTTGCCCTTTAA  TAGTTTACCGGCCGG 100 41
        pheA NONE
D9T12_RS06105 1448280 .. 1448292 +  -3.4  -3.05384   CAGCACTTTATTGAA                GCTT TAACT AAGC                TTGCATAGACAAAAA  45 5
D9T12_RS06110 NONE
        aroA NONE
D9T12_RS06120 1451334 .. 1451357 +  -7.4  -5.55001   AATGATTTTTAAAAT          CCCTAGGCTT TTCG GAGTCTGGGG           TTTTGTTTTTTATTA 100 80
D9T12_RS06125 1453159 .. 1453190 +    -5  -3.06394   GACGGATTCATAGTC      CAAACCGGCTGGTA ACTT TACCGGCCGGTCAA       ATTTGGTCTTTTATT  52 44
D9T12_RS06130 1453572 .. 1453588 +  -9.4  -6.04324   ATCGCTTAATCAAAA              GGGAGC TTATT GCTCCC              TTTTTTATTTTTTCC 100 32
D9T12_RS06135 NONE
D9T12_RS06140 1454937 .. 1454952 +  -5.4  -4.04174   TATAATCCGCGACTT              TCACGC ATAA GTGTGA               TTTCCTTGTCTCACC  65 208
D9T12_RS06145 NONE
        rpsR NONE
D9T12_RS06155 NONE
D9T12_RS06160 1457076 .. 1457101 + -15.5  -5.72622   TTTTTGCTTTAAAAA         CGGCCTTTCGA GTTT TCGGAAGGCCG          TTTTTTATTTCTACA 100 54
        dnaB NONE
         alr NONE
D9T12_RS06175 NONE
D9T12_RS06180 NONE
D9T12_RS06185 NONE
D9T12_RS06190 NONE
D9T12_RS06195 1463061 .. 1463073 +  -6.3  -3.33492   TTCAGTCATAGCATT                TGCTT GCA AAGCA                TTCTACAATAAATAC  59 243
D9T12_RS06200 1464568 .. 1464589 + -11.7  -4.24283   TTACTCTGTCAACGA           CTCTTTACC GGCC GGTAAAGAG            TTCTTTATATTCATT  91 51
D9T12_RS06225 1470400 .. 1470410 +  -3.2  -3.39844   CAAAGCTATGACGAT                 TCAG AAA CTGG                 TCTTTCACATCTAAC  47 132
D9T12_RS06255 NONE
D9T12_RS06260 1479956 .. 1479984 + -11.8  -4.23758   ACTGAAAATAAAAAA        GCCCGATAAGAA AGTTA TTCTCATCGGGC        TTTTGAATATGGCGT  91 114
D9T12_RS06300 1483733 .. 1483761 + -11.8   -5.1356   GATATTTTTAACGAA       CGCCGGT-GTGAC ATCT GTTACCACCGGCG        TTTTTATTGATAGAA 100 80
D9T12_RS06305 NONE
D9T12_RS06310 1485943 .. 1485962 +  -3.5  -4.24123   GAAGAAGAAATTCCA            CCGCC CCACTATTAA GGCGG             TTTTAACATTGTTCA  59 11
D9T12_RS06315 1486979 .. 1486993 +    -5    -3.922   ACGTTTACTTAAACC               CGTTTT ATC AAAGCG               TTTAGTTGGACGTTT  61 244
D9T12_RS06345 NONE
D9T12_RS06350 NONE
        lexA NONE
D9T12_RS06360 1493000 .. 1493029 +  -2.1  -4.93177   TCTACCAAACGGTCA       CGCCATTTTTC CAATTGAT GAAAATAGGCG        TTTTGTTGCTTTTTC  68 270
D9T12_RS06380 1498418 .. 1498430 +  -5.5  -3.02639   GAAAATGCCGCTTAT                GGCGT GAC ACGTC                TGGTTATTTAAAAAT  53 2
D9T12_RS06385 1499188 .. 1499198 +  -3.2  -5.40072   GCCCAAAAGTAAATA                 TCAG GAG CTGG                 TTTTTTTGCAGGAAC  79 403
        dksA 1500490 .. 1500508 +  -6.1   -3.6682   CAAGGTGTCGCATAA             GTTTACA GAACA TGTAAAC             TTTGACTCAATGAGC  63 26
D9T12_RS06400 1502268 .. 1502278 +    -4  -4.31379   GAAGTTGCCGATATA                 GTTA ACA TAAC                 TTTTAATCGCTTACT  61 25
D9T12_RS06405 NONE
D9T12_RS06410 1503371 .. 1503388 +  -2.7  -3.19668   TAAGCTCTCTGTTCT             TTTTACC GGCC GGTAACA              TTGGATTGCATAATC  44 136
D9T12_RS06420 1505810 .. 1505837 +    -7   -4.8622   CCTGAAACGAAAAAA        GCACGCCATTTA TTTA TTAATGACGTGC         TTTTTACTTAAAAAC  83 62
D9T12_RS06445 1511843 .. 1511855 +  -2.7  -5.08824   AATTCGACAGAAGAG                GTTTA AGT TGAAC                TTTTTTGCCTAAAAA  70 59
D9T12_RS06470 1515562 .. 1515572 +  -3.2   -2.9856   TTAACCTTTTATTAA                 GGGA GCG TCTC                 ATTGTTTGGAGTTTC  45 76
D9T12_RS06505 1523649 .. 1523661 +    -2  -5.18726   CAAAATTGGTCGGGT                TTGA AACCA TCAA                TTTTTATTCTGAAAA  69 95
D9T12_RS06515 1525961 .. 1525990 +  -5.1  -4.57837   ACAGCTATAAAAAAA       GCCATAGTGTCGTT TCA ATTGA-ACTATGGC       TTTTTAACGAAATCT  71 74
D9T12_RS06540 1531053 .. 1531071 +  -7.4  -5.76633   GTTGCAGACAAAAAA             GCGCCT CTGATCA AGGCGC             TTTTTTTATGTCTGA 100 71
D9T12_RS06550 1532258 .. 1532285 +  -3.5  -6.02919   AAGGCCGATAAAAAA        CCGCACAAGATT AGAAC AATCTA-TGCGG        TTTTTTTATTTCTAG  93 78
D9T12_RS06570 NONE
D9T12_RS06575 1538276 .. 1538294 + -10.3  -3.57615   ATGGTTTACAAAAAA             GCCTGTC TAACT GACAGGC             TTTAAAGAATGTTCA  82 43
         map NONE
        glnD NONE
D9T12_RS06665 1557366 .. 1557397 +  -7.3  -2.97903   TTGACTCACCAGAAC      TTACCGTCCGG AAACTCTTCA CCGGCCGGTAA       ATTTCAATTTTATAT  62 45
D9T12_RS06680 NONE
D9T12_RS06685 1560649 .. 1560659 +    -4  -3.72592   AAGCTTTACCGGCCG                 GTAT TCA ATAC                 TTATTAATAGGCCTT  54 108
D9T12_RS06690 1560907 .. 1560941 + -12.3  -2.99649   TGAACCCTATTAGAT    CAACACGGCAGGATGT TTTA ACA-CCTGCCCTGTTG     TCTATCTAGAAATCT  85 48
D9T12_RS06735 1570701 .. 1570714 +  -6.7   -2.8085   TCATCAATAGCTAGA               GAACG AATC CGTTC                ATTTAGATCCGTTAA  57 274
D9T12_RS06775 NONE
D9T12_RS06780 1578520 .. 1578536 +  -6.5  -4.07618   AAAATGCAGCAATCG              CGACGCT CAG AGCGTAG              TTTGGTTATTCCAAA  70 89
D9T12_RS06785 1579433 .. 1579450 +  -4.1  -4.96501   CTCAAACCCAATAAT             CTTTACC GGCC GGTAACG              TTTATTTTTATAAAA  72 27
D9T12_RS06790 1579999 .. 1580015 +  -2.3  -3.36839   GCAAATTAATTAACG              GTAAATG AGC TATTTGC              TATATTCTTTACTGG  45 113
D9T12_RS06795 1581358 .. 1581369 +    -3  -3.92132   TGGTCTCTTTTTAGA                TTCA TGGT TGAA                 GTTTTTTGTGTTTGA  52 306
D9T12_RS06800 1582768 .. 1582782 +  -8.6  -3.32844   GAATAATCGGTAACA               TCAGTG CGC CACTGA               TTATCAAATGCCAAC  69 415
D9T12_RS06810 1585709 .. 1585728 +  -8.6  -3.39936   TTGCCTATAAAACAA            CCCGTATT TATC AATGCGGG             TTCTCACATTTAAAT  73 75
D9T12_RS06835 1593642 .. 1593668 +  -3.8  -3.68341   ACTCTATTCATTTAC         TCAGATTTTG ACCAAAC CAAAATCCGA         TTATTGACTGGCATT  54 88
D9T12_RS06890 1606416 .. 1606426 +  -4.6  -3.60296   CTCTCGAGCAATTGG                 CCCG ACT TGGG                 TTTCCGGTAGCGATG  57 508
D9T12_RS06920 1612397 .. 1612410 +  -3.9   -4.2461   ACCTTAAACAAACAC               CTTAA TTCG TTAAG                TTTATTAGTCGCCAT  61 95
D9T12_RS06930 NONE
D9T12_RS06935 1616078 .. 1616093 + -10.4  -4.67011   TCAATCCAAATCAAA              CTGGCC ATAC GGCCAG               TTTTTCCATCACCTT  95 67
D9T12_RS06950 1619076 .. 1619101 + -14.9  -6.23317   TATCTTAATAAAAAA         GGATTGTAACC GGCC GGTTACAATCC          TTTTTTTGTTTTTAT 100 62
D9T12_RS06970 1623699 .. 1623709 +  -5.4  -3.57406   ACCCAACCGCTTTTT                 GGAT TAA ATCC                 TCTTTATCGTCCAAC  59 225
D9T12_RS07010 1632113 .. 1632142 + -15.1   -5.4588   TTTACAGAGCAAAAA       GCCCAAGTTTACC GGCC GGTAAACCTGGGC        TTTTTTATGGTTTTC 100 86
D9T12_RS07020 1633639 .. 1633650 +  -5.8  -4.66953   CAACCGTCAATCCAA                TGGG TAAT CCCA                 TTTTTCACATATTGC  75 265
        gloB 1635886 .. 1635896 +  -3.2  -4.48823   ATCTGAAGTCATCAA                 CGTC CCA GATG                 TTTTATGGATTAATT  62 182
D9T12_RS07040 1637897 .. 1637918 +  -2.2  -3.05384   CACTAGCGGATAACA           GCCTCATT CAAATT ATTGGGGC            TTCCATACGAAGAGG  42 41
D9T12_RS07045 1640294 .. 1640309 +  -3.3  -3.55622   AAAGATAAAATATAT              TGCAT AAACAG ATGCA               TTTCCAGCGCTTAGA  50 380
D9T12_RS07055 NONE
D9T12_RS07060 1643079 .. 1643104 +  -9.9   -4.7416   CATTACGTCAAAAAA         CAGAAAGTATT GTCA GATACTTTCTG          TTTTTCGCATTTTCA 100 50
D9T12_RS07065 1644001 .. 1644017 +  -4.5  -4.56133   CTTTTATAAGTGATT              CTTTTTG CCT TAAAAAG              TTTTGGTTGTTAAAA  68 119
         psd NONE
D9T12_RS07185 1662632 .. 1662651 +  -5.8  -4.84219   CGGTGAATCCGGTGA            C-GAAGCTT TGT AAGCTTCAG            TTTATTTTGTCCTTT  78 13
D9T12_RS07190 1663528 .. 1663543 +    -4  -4.63218   CTTGCGCCTGCACAT              CATCAA TTTT TTGGTG               TTTTATTAACCAACG  68 368
D9T12_RS07215 1667990 .. 1668014 + -14.5  -2.89742   AAACTTATTACTCAA          GCGTAATTCAT GTA ATGAATTACGC          TCTATCAAACTTACC 100 39
D9T12_RS07300 1682511 .. 1682526 +  -3.4  -2.64099   TTTTCACAACTCGAA              TTTTTT ATAA AAAAAA               GTTATAATAAACAAC  43 61
        queD 1682967 .. 1682994 +  -4.2  -3.06183   TAAAACAAAAAACAA        TGGGCTGTTTC ATCCATA GAAGC-GCCCA        TTGCCTAAGCATAAA  50 38
D9T12_RS07310 1684067 .. 1684103 + -16.1  -4.07885   GACACTTTTTTCAGG    TAAAAAACGCTCGATGA ACT TCATCGGGCGTTTTGTA    TTTTAACGCCAAGTG 100 95
D9T12_RS07325 1687049 .. 1687078 +  -5.1  -4.11216   GTAAAATTTTAAAAA       TGCTGAAAACC AAAAGTGA GATTTTCAGCA        TTTTGCCAATCCAAA  63 68
        ettA 1696483 .. 1696500 +  -8.5  -2.83403   CTCACTATTTTTAAA             CTTTACC GGCC GGTAAAG              ATTTCATCCCCACCC  66 295
D9T12_RS07375 1697587 .. 1697598 +  -4.4  -4.86731   AAGCCTTAAACGCCT                GAGT AAGA ACTC                 TTTTCTTTCGCCAAG  71 109
D9T12_RS07380 1700287 .. 1700312 +  -8.4  -2.71101   AAGAATCGCCATATG         TTGCTGATGT CTTTTT GCATCAGCAA          TGGCTTCTTTAAAGA  63 504
D9T12_RS07395 1702991 .. 1703005 + -11.4   -5.7946   CTCTTATCGACTAAA               CCCGCT TCA AGCGGG               TTTTTTTATTACCCG 100 43
D9T12_RS07400 1703864 .. 1703888 + -12.9  -5.29716   ATTAAAAACAAAAAA          CCCAGCACAGT CAA ACTGTACTGGG          TTTTTATTGTGTTAA 100 409
D9T12_RS07430 NONE
D9T12_RS07435 1714728 .. 1714748 + -14.1  -5.24129   TCTTAAAACAAAAAA            GCCGAATCA TTA TGATTCGGC            TTTTTTGTGAAACAA 100 122
D9T12_RS07470 1722632 .. 1722642 +  -2.4  -2.54841   CCTAAATTTCTTGAA                 GAGG CTG CCAC                 CTGTTCCTTACGGTT  40 278
D9T12_RS07475 1723389 .. 1723426 + -10.7  -3.17212   CGGCCGGTAAATTAA   GGAGCCTCCGATTAAAT TCTG ATTGAATCAGAGGTTCC    TTAATCAACTACTCC  79 82
        queG 1727237 .. 1727251 +  -5.7  -3.11584   CGCTTTAAAAAGCTC               CAGCA CCACT TGCTG               TCCTTTGTATTCCAT  55 273
D9T12_RS07500 NONE
D9T12_RS07505 1731643 .. 1731668 + -14.1  -5.27023   ACTGAATATTTCACC         GGCCGGTAAAG TTTT CTTTATCGGCC          TTTTGTTTTTCGGAT 100 103
D9T12_RS07510 1732382 .. 1732396 +  -5.8  -3.90856   GACCGGCCGGTGCCA               TTCAAT TCG ATTGAA               TTTCATTGACCGGTT  65 85
D9T12_RS07515 1734279 .. 1734305 + -11.7  -5.72622   TTTAAACGTTACCGG         CCGGTTTATTG ATAAC CAATAAGCCGG         TTTTTTATTTCTAAA 100 80
D9T12_RS07520 1735651 .. 1735668 +  -9.9  -3.01791   ACGTTTTTAGGTGCT             GCTCCAA GAGA TTGGAGC              TGTTAAACGGGAAGT  76 428
D9T12_RS07530 1737878 .. 1737910 +   -10   -3.0682   AACCTCTTAAAGGAA      CATTTGCTGAGACA ATTTC TGTCTCAGTCAATG      TATGTATCTCATGAC  76 54
D9T12_RS07535 NONE
D9T12_RS07540 NONE
D9T12_RS07545 NONE
        cobD NONE
D9T12_RS07555 1743167 .. 1743177 +  -3.2  -3.03771   AGTTCGCTTTAAATA                 CGTT GAG GACG                 TATTCAAACGTATCG  45 59
D9T12_RS07570 NONE
D9T12_RS07575 1748965 .. 1748991 +  -4.5  -3.55444   CCACTCTCAAACCTT        CCGGCAA-AC TTTATCGT GTCTTGCCGG         TTTGGCGACTAAAAC  55 236
D9T12_RS07580 1749965 .. 1749975 +  -2.4   -3.4331   TCAGGCGACAAAACT                 CGGC TAT GCAG                 CTTTTTAATCCAACT  45 7
D9T12_RS07585 1751450 .. 1751460 +  -3.2  -4.09739   TTTTTTGTTGAGCAT                 CTTC CAA GGAG                 TTTTGCAAACCTTCC  58 457
D9T12_RS07595 1752992 .. 1753025 +  -2.5  -2.52464   TTAAACCATTCACTG     GGGATTTGCAATGAAC TTT GAT-ATTGCAAAATCC     TCAATTCAAAAACCA  41 12
D9T12_RS07600 NONE
D9T12_RS07615 1758990 .. 1759013 + -12.6  -4.23434   GTAAGACGTTACAAA          CTGCCAATTT AAAG AAATTGGCAG           TTTTAAGCTGTTTTA  95 37
D9T12_RS07775 1790011 .. 1790021 +    -4  -3.66666   CAAACCCACATTCTT                 TCAA TAC TTGA                 TTTAAACCTTTTCGG  54 370
D9T12_RS07790 1795735 .. 1795764 + -16.7  -4.07568   ATATCATCAAATAAA       TAAAAAGCCGAAG TTAT CTTCGGCTTTTTA        TTTTCAACAAACCCC 100 58
D9T12_RS07795 1796225 .. 1796252 +  -6.9  -5.52986   CCAAAAACAAAAAAA        CGCCCACAACC ATAATC GGTTGCAGGCG         TTTTTTTCATCAAGT 100 55
D9T12_RS07805 NONE
D9T12_RS07810 NONE
D9T12_RS07815 1800477 .. 1800500 +    -9  -5.75342   AAAACTCTACCAAAA          CCTCTGTTGAA TTA TTCA-CAGAGG          TTTTTTTTGCGCCAA 100 56
D9T12_RS07890 1814135 .. 1814155 +  -6.8  -2.98169   GAATCATCCATTAAC            GCACCGTC CTCTA GACCGTGC            TGTGTGGCTTCTTGA  60 294
D9T12_RS07915 1818202 .. 1818215 +  -3.9  -2.93447   GATATTAATACAGCA               GATTT CATT AAATC                ATTTCTGAAAGTTGC  46 382
D9T12_RS07930 1820583 .. 1820609 + -10.3  -4.65168   TTGAATACAAAAAAA        CCGGAAA-TCTC TTAT GAGAATTTCCGG         TTTTTAGAATGTGGT  95 191
D9T12_RS07935 NONE
D9T12_RS07940 NONE
D9T12_RS07945 NONE
D9T12_RS07950 1824747 .. 1824759 +  -2.7  -3.45047   TCACCTATATATACT                TTACG TAA TGTAA                TTAGTGTATTTGTGT  46 130
D9T12_RS07955 NONE
D9T12_RS07960 1826159 .. 1826179 +    -7   -4.0371   TCAACCTTCTTCTTA            CTATATAC TTAAT GTATATAG            TTTCTATAAAAGGTA  73 83
D9T12_RS07965 1826429 .. 1826439 +    -4  -3.25479   GAAGCTTTAAGAGAG                 TCAT TCG ATGA                 TTAAGTATTTACTGG  48 11
        vapC 1826922 .. 1826934 +  -2.7  -4.06678   TGAGAAAGTAAGCGT                TTTCT TAA AGGAA                TTTCTATAAATGGAT  55 110
D9T12_RS07975 1827625 .. 1827639 +  -8.5  -5.61596   AAATTACCCAACAAA               CCGCG CTTGT CGCGG               TTTTTTTATGCCAGT 100 95
D9T12_RS07980 1828229 .. 1828245 + -12.3  -5.24531   ATAACTTACTCTACG              CCCAGCA ATT TGCTGGG              TTTTTTGTCACACCT 100 158
D9T12_RS08015 1833066 .. 1833079 +  -3.9  -4.89562   AAGCAGTAACAGATT               TTGTT CGAG AACAA                TTTTATTGATTTTGG  72 3
D9T12_RS08055 1838580 .. 1838602 +  -7.8  -4.27441   CTCTCAAATGAAAAA           TGGGACTT CAAAGAC AAGTCCCA           TTTCTTACTCCTCAT  78 41
D9T12_RS08320 NONE
D9T12_RS08325 NONE
D9T12_RS08330 NONE
D9T12_RS08335 1890170 .. 1890195 + -13.5   -5.1848   GTAGACATAAAAAAA         CCCAGAATTTT GCGG AAAATTCTGGG          TTTTTTACATTCCTT 100 148
        trxB NONE
D9T12_RS08375 1900005 .. 1900026 +  -8.7  -6.32017   AGGCTTTTCTAAAAA           CCTGTTTCG ACTT CGGAGCAGG            TTTTTTTTATTTATT 100 77
D9T12_RS08385 1901196 .. 1901233 +  -5.5  -3.31515   TCACCCCTGAAAACA   GAAAACCCGAGCCAAAC AGAC GTTCAACTCGGGTTTGC    TTATCGAAAATCTTT  57 54
D9T12_RS08405 1906233 .. 1906245 +  -6.3  -4.08064   CACTGGTGCAAGACT                TGCTT AAA AAGCA                TTTTGCAGAGGCATT  67 82
D9T12_RS08410 NONE
D9T12_RS08415 NONE
D9T12_RS08420 NONE
D9T12_RS08425 1908049 .. 1908080 +  -8.9  -3.70863   GCACAAAATAAAAAA      CTTTGTCCAATAC AACTAG GTATTGAACAAAG       TTTGCATAATATCTC  78 69
D9T12_RS08655 1956927 .. 1956940 +  -3.1   -3.3482   GATAAATCAACCTTT               GCAAG ACAC TTTGC                TTGCTTAAGGCGTTA  47 133
D9T12_RS08685 1963734 .. 1963750 + -12.3  -3.61517   ATCTTAATTAAAAAA              GGGAGCA ATT TGCTCCC              TTATTGGAAAACGAT  90 419
D9T12_RS08700 1971782 .. 1971818 + -16.1  -4.07885   GACACTTTTTTCAGG    TAAAAAACGCTCGATGA ACT TCATCGGGCGTTTTGTA    TTTTAACGCCAAGTG 100 39
        flgA 1982857 .. 1982875 +  -2.4   -5.0916   AAAACGTCAAAAATT             CGTTAGGA TTT TTCTAAAG             TTTTTCTATTACAGC  69 59
        flgM NONE
D9T12_RS08765 NONE
D9T12_RS08770 NONE
D9T12_RS08775 1989032 .. 1989058 + -10.8    -3.551   AAAGAAAATAAAAAA         CGCCATCACGCT TAA AGCAGGATGGCG         TTCTATCGCTTCCAA  84 48
D9T12_RS08820 2000114 .. 2000130 +    -5  -3.70149   AACTTTACGCTTTCA              GCCGCG CCACA CGCGAC              TTTACGTACTGTCGC  57 474
D9T12_RS08840 2006419 .. 2006449 +  -4.9  -4.15235   AGAATGCCTAGCAGT      CT-TTAATTCAGCA GTTT TGCAGAATTAACAG       TGTTTTTTAAACATT  63 20
D9T12_RS08850 NONE
D9T12_RS08855 2009975 .. 2009994 + -10.7   -4.2803   AGTACCTGATATTAG            CACCCGC TTCAAC GCGGGTG             TTTTACGTTAAAATA  90 52
D9T12_RS08860 2010730 .. 2010747 +  -5.6  -3.62096   TTCTTTTAGTTGAAA             CTTACC AAAACA GGTAAG              TTTCACATACTACAA  58 49
D9T12_RS08865 2013861 .. 2013883 +  -9.9  -5.46657   GCTTTCCACCCAAAA           GCCTTACTG ATTTA CAGTGAGGC           TTTTTTATTAGCATG 100 57
D9T12_RS08870 2014497 .. 2014514 +  -9.9  -5.18355   ATATAATCATAAAAA             GCCAATC AAAC GATTGGC              TTTTTGCTTTTTAAA 100 58
D9T12_RS08905 NONE
        trpS 2022172 .. 2022188 +  -8.7  -2.70275   TCGAACCCCTAACCG              CTCGGTT CGT AGCCGAG              TACTCTATCCAGTTG  66 196
D9T12_RS08930 2027168 .. 2027194 +  -8.9   -3.2964   ATCATTCTCAATTTA        GAGGAGA-CAAT ATAT ATTGATCTCCTC         TTATCAAGAAGCTTT  73 49
D9T12_RS09015 2050957 .. 2050978 +  -5.7  -3.77219   AGAGCACACAAAAAA           GGCCAGCCA TTTC TGGCCAGCC            TTTAAGTTCACTACT  60 89
D9T12_RS09035 2054878 .. 2054901 +  -3.8  -3.64283   AGGGCACGAATAGCT          TTGGGCGGTA ATAG TACCTCTCGA           TTCTTGCGCCCTTTA  53 371
D9T12_RS09070 NONE
D9T12_RS09075 NONE
D9T12_RS09080 2061013 .. 2061025 +  -4.1  -3.63073   CTGCATCTGGTCAAG                GATTC TAT GAGTC                TTGTTAAACCCTGTC  54 135
D9T12_RS09090 2062698 .. 2062717 +    -5  -4.77567   TCTGTGTCAGCCGAG            GGTGCT AAATATCG AGCACC             TTTTGTTGTCAGAGT  74 148
        mutS NONE
D9T12_RS09115 NONE
D9T12_RS09120 NONE
D9T12_RS09125 NONE
D9T12_RS09130 2071701 .. 2071718 +  -5.6  -3.74747   ATTTTGCTCGATAAG             TGCTGA CCTCAC TCAGCA              TTTCCTGCAGATTAA  63 90
D9T12_RS09140 NONE
D9T12_RS09145 2075073 .. 2075083 +  -5.4  -3.73107   CTCTGATTATCTGTG                 CGTT TCA AACG                 TTTAACATTTACTAA  60 218
D9T12_RS09150 2076214 .. 2076268 +  -7.2  -4.73388   ATTTGTTTAATTGAA TCTCAACTTCCTTATCACCGTAGTAA ATA TAAGCACGGTTATAAGGTAGTGGAGA TTTTTCATGGCAATT  83 251
D9T12_RS09190 2086550 .. 2086595 +  -6.5  -2.93481   AAACAAAAAATAAAC TTTATTAGCATTTCATAATAA AAGA TTATTATTAACTGCTAAAAAA ATTTAGATTTGATTT  60 28
D9T12_RS09195 2087310 .. 2087336 + -10.2  -5.71712   AAAATCCCCCTCCGA         CCGCGCTTAG CCCCCTT TTAAGCGCGG         TTTTTTTATATAAGA 100 79
D9T12_RS09235 2094122 .. 2094132 +  -5.4   -3.0062   GGCAGATTTGCAATC                 GGAA CAC TTCC                 TGCTTCTTGGTTATT  53 111
        galU NONE
D9T12_RS09245 NONE
D9T12_RS09250 NONE
D9T12_RS09255 2099516 .. 2099574 +  -7.8  -4.32857   ACTCAATCCACTATT TAGTCAATTCTGAATAACTCGTTT AATTTATGGCA AAGCCAGTTATTCAGAGTCGACTA TTTATCTTTGCAGCC  78 110
D9T12_RS09270 2103856 .. 2103900 +  -8.8  -2.62316   AATCATCTCCTAACG CTTGAGCTTCACAGTA CCAATCGCAAGAT TACTGGGAAGCTCAAG TACCTTCTCAATTTC  68 39
D9T12_RS09275 2104453 .. 2104464 +  -4.4  -3.13925   TCCCTCACTATTCTT                TACC GGCC GGTA                 CTTGTTTATTAATCA  51 83
D9T12_RS09280 NONE
D9T12_RS09285 2107197 .. 2107223 + -12.4  -2.55896   CCTTACTGAACCTAA         TGCCGAGAACTT GAA AAATTCTCGGCA         CTCTTACTTAGTCGA  82 330
D9T12_RS09305 2112543 .. 2112556 +  -5.3  -4.06182   TCAACCTCATTCCCT               GAAAC AATA GTTTC                TATTTTTCTCACTAA  65 95
D9T12_RS09355 2126199 .. 2126209 +  -5.4   -3.2327   AAAACAAAATCACTC                 CCAT TCA ATGG                 TTGCTGGTGGCTTAG  55 353
D9T12_RS09370 2130002 .. 2130017 + -10.4  -5.64304   AACCCAAACAGTAAA              CCCTGC AAAT GCAGGG               TTTTTTATTATCTTA 100 68
D9T12_RS09380 2131332 .. 2131342 +    -4  -2.57344   AAATTGATGTTTAAA                 CTTT AGG AAAG                 CTTATGCCAACGCTC  45 71
        serB 2132239 .. 2132262 +  -9.4  -3.53563   ATCGGCAATAAAAAA          GCGCGCCAGG CAAT CCAAGCGCGC           TTTCAAGAACCGTGT  78 91
        exbB NONE
D9T12_RS09400 NONE
D9T12_RS09405 2135472 .. 2135486 +  -2.9   -3.7948   CCGGTAAATTATCTC               TATTC GGCTG GAATA               TTTAGTCACTCTTAC  50 52
D9T12_RS09410 2136067 .. 2136083 +  -5.9  -3.08812   AACTGCATTCCCTTC              CATTTTC CAA GGAAATG              ATTTGTTGCAAAAAC  56 71
D9T12_RS09415 2137837 .. 2137866 + -18.1  -2.52795   ACATTGTCTTACCCA       TAAAAAACGCCGC TATT GCGGCGTTTTTTA        TACGTTAAGAAACTT 100 49
D9T12_RS09450 2145171 .. 2145186 +  -4.8    -4.254   GGTTTAGACGTTTTT              TCATTT GATT AAATGA               TTTATTGAATCTTAC  65 14
        mreC NONE
        mreD NONE
        mrdA NONE
        rodA NONE
D9T12_RS09475 2151121 .. 2151143 +  -5.6   -5.4833   TTGAATGATTCTAAA          GCCGC-ATC CACAGT GATCGCGGC           TTTTTTGTTGCATGA  88 77
D9T12_RS09480 NONE
        lipB 2152311 .. 2152326 +  -4.7  -2.60211   TAAACATTGTATGAC              GCACA ATTTCG TGTGC               AATTTTTGAAAACCT  49 67
        lipA 2153428 .. 2153444 +  -2.3  -3.63228   GACTGAACAACATTA              TTTTGGA TTC TACAAAA              TTAATTTGTACTGAG  47 35
D9T12_RS09495 2154747 .. 2154761 +  -2.8  -3.72027   CATAATTTTTTTCGC               TAGCCT CAA AGGATA               TTCTTCCTGAGAAAT  50 362
D9T12_RS09540 2163749 .. 2163767 +  -6.7  -3.54414   AATTAAATTTAAAAG             CGCTTGG TTAAT TCAAGCG             TCTTTAATTCCAAAT  64 410
        epmB 2166653 .. 2166667 +  -7.2  -3.91908   AAGTATTGGGTTTAG               CATAAG CAT CTTATG               TGTTTTTCGCCATGT  72 237
D9T12_RS09565 2167689 .. 2167712 +  -2.4  -5.48163   TTGCAAAAAAACCTA          GTCTGA-GAGC TTT GCTAATCAGGC          TTTTTTACTTTCTTT  76 20
D9T12_RS09660 2193701 .. 2193717 +  -3.8  -4.37763   TAAACATAAAAAGAA              TCATTA AAAAA TAATGA              TATTTTTTTGCATAA  63 493
D9T12_RS09685 2198075 .. 2198085 +    -4  -2.85446   ACCATTTGGCTAACA                 GAAA ATT TTTC                 TCTCATCAATTTCTG  46 62
        msbA NONE
D9T12_RS09705 NONE
        hldE NONE
D9T12_RS09715 2204978 .. 2205005 +  -7.8  -4.84918   CTAGAAACTAAAAAA        GCCGC-CAATCAA TTG TTGATTTAGCGGC        TTTTCTGTTTATCAG  88 37
D9T12_RS09730 2207711 .. 2207735 +  -2.9  -2.59132   ACTCAATTAATTAAG          GACTTTCTTAA AGC TTAAGAAAGCA          AATTTTCTATGACTG  41 8
        argF 2208678 .. 2208692 + -11.4  -5.37345   ACACACATAAAAAAA               TCCCGC AAT GCGGGA               TTTTTTATAGTTAGA 100 54
D9T12_RS09765 2215730 .. 2215758 +  -4.5  -4.59773   CCATCCTTGAGGCGC        TCGGCGCAGAA CTTCCTA TTCTGCGACGC        TTTTTAAAACTCAAC  68 105
D9T12_RS09785 2220432 .. 2220450 +  -5.3  -5.52384   GTTAACATAAAAAAA             CTCCAAG GGGAA TTTGGAG             TTTTTTTCGTACAAC  88 85
D9T12_RS09790 NONE
        modA 2222671 .. 2222682 +  -4.4  -2.67428   TGTTTTATCAGATGT                GTCA GCAA TGAC                 TCAGTTATTAATACG  47 49
D9T12_RS09800 2223385 .. 2223403 +  -2.4  -5.75342   AAATTACTAACCCAA             TTAAAGAG AAA CTCTATGA             TTTTTTTTCAAACCC  80 31
        modD NONE
D9T12_RS09810 2225454 .. 2225469 +  -2.6  -4.19258   AAGAATGACAACCAC              TTTTAC CAAA GTGAAA               TTTTAACTAGAATAT  57 482
D9T12_RS09815 2226979 .. 2226992 +  -2.4  -3.91144   GCTAGTCATTACAAC               GCAA AAAACA TTGC                TTTATGCAATCTAAA  51 54
        soxA 2228264 .. 2228276 +  -7.7  -4.83615   TCGCGGCAAGTCAAT                TTCCG AGT CGGAA                TTTTTATCCGCAGTA  88 177
        soxX NONE
D9T12_RS09830 NONE
D9T12_RS09835 2230657 .. 2230668 +  -4.4  -4.30791   TTTAAGCTGCGGATG                GCAA GGTT TTGC                 TCTTTTTATTTACTT  63 223
D9T12_RS09840 2231336 .. 2231353 +  -2.6  -5.71712   TGGTCTACAGGTTTT             ACCCAG CTTTGT CTGGGC              TTTTTTTATGTGGGC  81 96
D9T12_RS09850 NONE
D9T12_RS09855 NONE
D9T12_RS09860 2240108 .. 2240123 +    -9  -3.05597   TACCAAATTTAGGGC              CACGAC TTCA GTCGTG               ATTTTGGCAGGTAAC  68 294
D9T12_RS09895 NONE
D9T12_RS09900 2249413 .. 2249431 +  -8.9   -2.6933   GGCGGATAAAGACGA             CGTGTAC AGTTA GTACACG             AGTTTTTATCCAACA  68 128
D9T12_RS09940 2257256 .. 2257283 + -14.3  -3.33744   CGTCCATGAGTCGAT        CGTCACAGAAC CTCCTT GTTCTGTGACG         CTTTTTAAAACAACC 100 115
D9T12_RS10055 NONE
D9T12_RS10060 2288635 .. 2288650 +    -9  -4.17762   ATCCAAACAAAAAAA              CCAAGC ATTT GCTTGG               TTCTTTTAAAAAATC  81 62
        hslU NONE
D9T12_RS10095 2294964 .. 2294976 +  -9.1  -2.74144   AATTCTTTCTAGCTA                GGCAC CGA GTGCC                CTTTAGGAATCACAA  68 83
        ubiE 2295837 .. 2295848 +  -4.4   -2.7185   TGGAAATACTGAACC                GAGT GAAC ACTC                 TGATTCCAAGCTAAT  47 29
D9T12_RS10105 2296629 .. 2296639 +  -3.2  -2.69319   CCAACCTGATTTACT                 TGCT TCG AGCG                 CTTCTATGACGAATT  43 98
        ubiB NONE
D9T12_RS10115 2299060 .. 2299071 +    -3  -4.62336   AAATAGTCCCTTCAT                TTTG TTTG CAAA                 TTTTTCGAATAGAAT  62 45
D9T12_RS10120 2300012 .. 2300036 +  -5.1  -3.63968   TTCAAAATAAACGAC         CCGGTCAATA CCGCAT TAT-GACCGG          TTTGACGATTTAGCA  59 328
D9T12_RS10240 NONE
        prfA NONE
        prmC NONE
        moeB 2327715 .. 2327739 +  -5.8  -3.71848   ACGAGCAGCGGAAAG          TTCCCAGTTT GAAGG AAACTGGAAA          TTGTTAATAGGCACG  61 299
D9T12_RS10280 2333667 .. 2333677 +  -6.8  -5.71638   GCTTACGCTTAAAAA                 CGCT CCA AGCG                 TTTTTTTGGTTATTC  93 149
D9T12_RS10285 NONE
D9T12_RS10290 NONE
D9T12_RS10295 NONE
D9T12_RS10300 2337554 .. 2337575 +  -5.9  -4.12942   GGTTTAAGCACGGCT           TGCAAACCTG AAA CAGGTT-GCG           TTTTGAGACCTTTAA  68 313
D9T12_RS10315 2341196 .. 2341212 +  -3.7  -4.38369   GGGCCAGCTTTCTTT              CTTGG CTAGACA CCAAG              TTCTTTGTTTGATTC  63 270
D9T12_RS10355 NONE
D9T12_RS10360 NONE
D9T12_RS10365 2351946 .. 2351962 + -10.9  -2.74784   TTTTCAGATTTTCCT              TCCAGCA TTT TGCTGGA              TAACTTTTGCAAAAT  77 474
        msrP NONE
D9T12_RS10390 2356601 .. 2356613 +  -6.3  -4.15222   CGGCTTTAAAATAAT                CACTT TCC AAGTG                TTTATTCAGCCAAGT  69 357
D9T12_RS10405 NONE
D9T12_RS10410 2365558 .. 2365584 + -15.2  -4.41348   ACAGGCAATAAAAAA         CCCTCGGACAAC ATT GTTATCCGAGGG         TTTGTTTAGGCAAGA 100 78
D9T12_RS10420 2380822 .. 2380845 +  -9.6  -5.55769   TTGTGACAAAGAAAA          GCCCTACAAC TTTT GTTGTAAGGC           TTTTTTCTTATACAA 100 65
D9T12_RS10425 NONE
D9T12_RS10430 NONE
D9T12_RS10435 2385235 .. 2385247 +  -3.5  -2.80895   AGAACACGCTTAAGA                TTTTT CGG AAAAA                GTTATGTATATTAAA  44 28
D9T12_RS10440 2385672 .. 2385705 + -16.2  -5.07652   TTTCGAAATAAGATA     CCGGCCGGT-AACAT TATTT ATGTTTACCGGCCGG     TTTTGTTTTGCAAGC 100 66
D9T12_RS10455 2389300 .. 2389316 + -10.1  -5.24531   CTAAAAACACTTTAA              GCCCGAT TTA GTCGGGC              TTTTTTATGCCCACT 100 61
D9T12_RS10460 2390627 .. 2390656 + -16.5  -4.98522   GACCAATAAAAAACA       CACCGGCCGGT TTATTTTT ACCGGCCGGTG        TTTTTCTATAACGTT 100 67
D9T12_RS10475 2393525 .. 2393556 +  -2.3  -2.70354   GAATTGTCTCCTATA      GAGGCCAATTATT TTTTAT AATATTCGGCTTC       TAAATTTATAGAGAC  40 60
D9T12_RS10480 NONE
D9T12_RS10485 2396272 .. 2396290 +  -5.4   -4.1711   AAAGTCGGCCAGCGC             CTAAAGAA TTC TTTTTTAG             TTTCTTAAGGCTCAT  65 126
D9T12_RS10490 2397379 .. 2397418 + -16.1  -5.95946   TCAGACAAAATAAAG  GCTCTAAGATTATTTAG TCGACT CTGAATAATCTTAGAGC   TTTTTTTATTCTTAA 100 111
D9T12_RS10495 2398439 .. 2398452 +  -2.3  -2.56539   TTAAATATTGAATCA               TGACC GGCC GGGCA                ATATTGTCGATTAAG  39 261
D9T12_RS10505 2400828 .. 2400839 +  -5.8   -2.8154   AAATTCGGTAGTCTA                GGCA TTTA TGCC                 CTTTGGGTACTCATT  55 89
D9T12_RS10510 2402342 .. 2402371 +  -9.3  -3.05384   TACTCTGTTTAGAAA       CCAGCTTAACGTC AACA GACCCTAAGCTGG        TTAGCTCCGACAAAC  74 45
D9T12_RS10530 NONE
D9T12_RS10535 NONE
        yidD 2410912 .. 2410924 +  -3.3  -4.91109   TAACTCGTTTAATTT                ATGGC AAA GCCAG                TTTTTATACTCAACA  70 104
        ppk1 2413427 .. 2413448 +  -5.9  -2.93623   ACTTTATACGTAACA           TTGCGAGTA TTTT TACTCGAAA            TCCTGTTTTCAGACA  56 97
         ppx 2415171 .. 2415206 + -16.3  -2.79183   TTTATTCATACTGTT    CGCTTTGCGATGGCC TTTCAT GGTTATCGCAAAGCG     TGTAGTACGAATAAA 100 63
D9T12_RS10565 NONE
D9T12_RS10570 2418984 .. 2419004 + -10.4  -2.70532   TGGTTAACTATTGAC            CGGCCGGT GAATA ATCGGCCG            TAAATTTATGAGGAT  76 34
        sixA 2419656 .. 2419668 +  -6.3  -4.73094   CATCCATATCCACAA                CATCA AAT TGATG                TTTTGTCTTAATATT  78 146
D9T12_RS10580 2420446 .. 2420460 + -11.4  -5.80364   ACTTCAATAAAAAAA               CCGCCT ATT AGGCGG               TTTTTTTATTCACAT 100 137
D9T12_RS10605 2424953 .. 2424993 +  -8.4  -2.83403   AACAACTTTCATAAA AT-ACCGGCCGGTACAAAA CAGT TTTTCTGCCGGCCGGTCAA  GTTTCATGCGCGAGC  66 27
D9T12_RS10620 NONE
D9T12_RS10625 NONE
D9T12_RS10630 NONE
D9T12_RS10635 2432994 .. 2433009 +  -2.4  -2.70528   CGCCCTGGTATTAAG              TGGCGG TATT CCGGCG               TAATCTGTGCGTAAT  40 7
D9T12_RS10640 NONE
D9T12_RS10645 NONE
D9T12_RS10650 2436231 .. 2436268 + -13.5  -2.57211   GCCTATTAAAGTCTA   TTAACGGATTCCCACGC TTCT GCGTGGGAATCCATAAG    CTTGTGCCAACCGAT  87 42
D9T12_RS10660 2438531 .. 2438547 +  -2.1  -4.58395   GGTTTTAAAAGGAAA              CGGCGAT TTA AACGCGG              TTTTTGCCGGATAAA  63 223
D9T12_RS10670 2440301 .. 2440350 +  -7.1  -3.36803   AACAATGCCATAAAC TCGGACCCCAAAAGGCACCGCTCC TTC GTCGCTATGCTTTTTGGG-TCCGG TTATGGCTGGCGTTA  65 47
D9T12_RS10675 2441143 .. 2441157 +  -2.8  -3.32844   AAGCTTCCGAAAAAA               CGCT CAACAAC AGCG               TTGTACCCTCAAGGG  46 137
D9T12_RS10690 2442508 .. 2442537 + -11.3  -3.69216   ACATCAAGGTTTTGT       CTCGCCCCCATGC TCCT GCGTGGGAGCGCG        TATTTTGGATACAAG  88 70
D9T12_RS10695 NONE
D9T12_RS10700 2443295 .. 2443319 +    -5  -4.77173   GCTAAAAACACAGAA         ACCTCAGTACC CAAA GGT-CTGAGGC          TTTGTTTTGTCAGAA  74 80
D9T12_RS10705 2445547 .. 2445562 +  -3.2  -2.64933   TGGCACAGCCTTTAC              GCAGGA CGCA TCCTGA               TAGTGTCAGTGAATA  43 334
D9T12_RS10710 2446189 .. 2446199 +  -5.4   -3.4314   GTGCTTCAGAGAGAA                 TCTG TTG CAGA                 TGTTCTTCGCCTTTA  57 187
D9T12_RS10720 NONE
D9T12_RS10725 NONE
D9T12_RS10730 2449730 .. 2449752 +  -9.2  -3.66658   ACGCTCAAGTAAACT           GGTGCGAA TTATCTT TTCGCACC           TCTTTTCACGCTGTT  81 62
D9T12_RS10755 2454648 .. 2454660 +  -5.5  -3.06302   TCTCCATAATTACGG                GTGCT CGG GGCAC                TTGCATAAGGATAGT  52 83
D9T12_RS10775 2458021 .. 2458033 +  -3.3   -2.7386   TTCTCTTGCAAAACT                TGGCA AAA TGCCC                TAATTCACATCACTT  43 10
D9T12_RS10780 2460075 .. 2460090 + -10.4  -4.96848   TATGACAGTTAAAAA              GCCAGC TATT GCTGGC               TTTTTGTGTAACAAA 100 79
D9T12_RS10785 2462255 .. 2462276 +  -3.9  -4.13014   TGACAGGCTGAATTG           TAGAAATAT TCGA ATATTTTTA            TTTTAAGAATATCGA  58 184
D9T12_RS10790 2462589 .. 2462600 +  -4.4  -2.78816   TCACGTGGTGAGAAA                GTCT AAGG AGAC                 TATCATGCGCGATAA  48 20
        rpmG 2462784 .. 2462806 +  -6.1  -5.77988   TGATCTTCTTAAAAA           CCCGGAAGC CAAAA GCGACCGGG           TTTTTTTATGTCTAT  91 52
        mutM 2470483 .. 2470504 +  -4.5  -2.83071   CAAAACGTGTCGGGA           TTTTGGCAA TATC TTGACAAAA            CTTTCACTGTAACTT  48 42
D9T12_RS10820 2471081 .. 2471097 +  -4.5  -3.18264   CGTGAATCGAGCTCC              CTAGAAA AAC TTTTTAG              TTAATGAATCAGAGA  51 22
D9T12_RS10850 NONE
D9T12_RS10855 2479211 .. 2479244 + -11.3  -2.90901   ATGACATCTAGATAA     TTAAAATATGCTACC GGCC GGTAACATATTTTAA      TGTCATTGGAACTCT  79 30
D9T12_RS10880 2484209 .. 2484223 +  -4.3  -3.03124   ACTCCAAGTGAAGAA               CTTAC AAACA GTAAG               TCTTAAACACTCACA  50 5
D9T12_RS10885 2486645 .. 2486666 +  -4.3  -5.00851   AGCATTCTGCGTGGA           TAGCCCGAT AATA AACGGGCCA            TTTTGTTTCATTGGT  74 434
        ftsY NONE
D9T12_RS10905 NONE
D9T12_RS10910 2492035 .. 2492061 + -10.3  -2.90075   ACAGGCATAAAAAAA        CCGGAAG-GATT TTAC AATCACTTCCGG         TCTCATTAAAACGCG  77 72
D9T12_RS10985 2506500 .. 2506512 +  -3.3  -3.71873   CCACCTATTTCAACG                CCGAC CAT GTCTG                TTTGAGTGTACATGC  51 511
D9T12_RS11010 2510121 .. 2510147 + -10.2  -4.24002   CTATCTTAAAAATTA         GACCAGCGCA TTTTTTT TGCGTTGGTC         TTTTGCGCTTTAAGA  86 46
        gltB NONE
D9T12_RS11020 2516380 .. 2516406 + -12.3   -4.7629   ACCTATTACCCCAAA         GCCCACTATGG TTTCC CCTTAGTGGGC         TTTTTACATTCCTAA 100 61
D9T12_RS11025 2517394 .. 2517405 +  -5.8  -3.89957   ATGCATCGTTTTTAA                GCCA TTCA TGGC                 TTCTTCGTTATTCAA  63 485
D9T12_RS11035 2519575 .. 2519588 +  -3.9  -3.10715   CAAATACTTTTTGAA               CTATT TAAA AATAG                TTAACTACTCATAAA  47 423
D9T12_RS11040 2521295 .. 2521326 +  -5.4  -2.57211   TGCGTATGATGAAAA      TCGTTGA-AATTAAC AGC GTTGATTATTAACGA      ATTATGCACGCAAAT  51 117
D9T12_RS11045 NONE
D9T12_RS11050 2522779 .. 2522804 +  -4.5  -5.10154   TCTAAACTAAATAAA         ACCGCGTTCAC CAAG GTGTTCGCGGC          TTTTTCATTTTAAAT  76 51
D9T12_RS11065 2525785 .. 2525819 +  -3.4  -4.45544   ATACTCTTTGCCAAA     CTGCCTGAAAATGGAT GAC AACCACGATCGGGCAG     TTTTACTTCCTGAAA  62 49
D9T12_RS11070 2527501 .. 2527529 +  -9.6  -5.46698   CGCTCTTAACAAAAA       GCCCCGA-CGATT AAAT AACCGATCGGGGC        TTTTTTCATTTTGAA 100 232
D9T12_RS11080 2531639 .. 2531652 +  -3.1  -3.85509   GCACTCAATGATTAT               GGAAC AGCC GTTTC                TTTGACTTCTCTTGG  55 121
        trxA NONE
         rho 2543003 .. 2543025 +  -2.1  -3.83188   TCAAAAACAAAAAAA           TTTAAAAGT TGCTT GCTTTTGAA           TGTTTTATCACTATA  51 99
D9T12_RS11130 2543360 .. 2543385 + -11.9  -5.71712   CGAAGCTACGAAAAA         CGCGGGTGTAC ATCA GTACATTCGCG          TTTTTTTATGTCAAA 100 55
D9T12_RS11135 NONE
D9T12_RS11140 2545524 .. 2545552 + -10.4  -2.91582   TTTTAAAAAACGATA        GGCATTCTCTAA GACTA TCAGAGAATGCC        TATCTCAATCACATG  77 43
D9T12_RS11160 NONE
D9T12_RS11180 2555548 .. 2555568 + -11.9  -5.83226   ACTCTAAACGAAAAA            GCCGAAACG ACC TGTTTCGGC            TTTTTTTATTGGCTT 100 50
        thiD 2562109 .. 2562121 +  -4.7  -3.61398   TGACATTAAACCTCG                CGGCC CAT GACCG                TTGTTCACAAACAAA  57 274
        msrB NONE
D9T12_RS11225 NONE
D9T12_RS11230 NONE
D9T12_RS11235 2569239 .. 2569253 +  -8.6  -2.78018   CCGGGCAAGTCTTAT               CGTCAA AAA TTGACG               TAATTAATAAGGACT  69 432
D9T12_RS11240 2571092 .. 2571121 + -15.1    -3.965   CTAAAGCTTAGAAGT       CCCCTTCAACGAC AGTG GTTGTTGAGGGGG        TTATTGGTTTTAGGG 100 54
D9T12_RS11275 2579481 .. 2579492 +  -4.4   -4.2558   TTACCATTATGCTTA                GCTT CATA AAGC                 TTTTCATCAGCAATC  63 493
D9T12_RS11300 NONE
D9T12_RS11305 2584604 .. 2584624 +  -5.6  -2.87564   TTGCGTAATGAATTT            TCAAATTA AGGTG TAATTTGA            TGTCTGCACAACTCA  52 17
D9T12_RS11310 NONE
D9T12_RS11315 2586250 .. 2586260 +  -5.4  -3.13164   TAGAAATCCTAAAAC                 GCAT TTT ATGC                 TTGCCTACTTAAGAA  55 118
D9T12_RS11320 2587360 .. 2587373 +  -3.9  -2.54098   AACAAAATTAACTTT               TCTTT CATT AAAGA                CTATTGATTGAACGC  45 30
D9T12_RS11325 2589701 .. 2589720 +  -7.9   -4.9138   CATTTTTAACTTTCA            GACTCCT AACACA AGGAGTC             TTTTATTTAACTCAT  89 32
D9T12_RS11330 NONE
D9T12_RS11335 NONE
D9T12_RS11340 NONE
D9T12_RS11345 NONE
D9T12_RS11350 NONE
D9T12_RS11355 2597917 .. 2597936 +   -10  -4.20834   GAAAAACCCAACACT            CCGATGCT GCTT GGCATCGG             TTTGATTATTTTAGA  86 294
D9T12_RS11365 NONE
D9T12_RS11370 2599245 .. 2599261 +  -5.2  -3.91716   TTAATAGGCGATTCT              GATAGA CTTTT TCTATC              TTATTTAACGCCTGA  63 158
D9T12_RS11405 2606940 .. 2606961 +  -8.8  -2.59431   AGAGTTTCAAGCAAG           TAACGGCT TTTTAT AGCCGTTA            TGCGTTATAAACGAA  68 205
D9T12_RS11430 2615672 .. 2615686 +  -2.8  -4.71776   CGTAAATTTCTGGCC               ATTTGC TTG GCAAAG               TTTTCTTGCATGTTC  64 484
D9T12_RS11440 NONE
D9T12_RS11445 2617473 .. 2617499 + -15.2  -4.89567   CAAATTAGAGTTTTA         CCCCACAAAGCA ATT TGCCTTGTGGGG         TTTTGTCTTTTAAGA 100 73
D9T12_RS11455 2620775 .. 2620799 +   -13  -5.42198   TTCCTTCCATGTTTC          CTCAGCCAAT CTTGT ATTGGCTGAG          TTTTATTTTTTAAGG 100 73
D9T12_RS11460 NONE
D9T12_RS11465 2622726 .. 2622742 +  -6.7  -4.07687   GTATACTGGTAGCTG              TTCAATA AGT TATTGAA              TTTTCAAGACCGACT  70 140
D9T12_RS11470 2623039 .. 2623056 +  -9.9  -5.08169   AATTTAAGTCATAAA             GCCAGTT TTCG AACTGGC              TTTTTTCCCATCTCT 100 41
D9T12_RS11475 NONE
D9T12_RS11480 2627084 .. 2627105 +  -5.8  -5.14965   TAACCAACTAAAAAA           CACCCCAT CGTTAA ATGGGGCG            TTTTTTGATACACGT  83 44
        hemB NONE
D9T12_RS11535 NONE
D9T12_RS11550 2640653 .. 2640664 +    -3  -3.01791   CTCTTGATTAAATTA                GATT TAAA AATC                 TATTAGGAGACAGGT  43 147
D9T12_RS11555 2641306 .. 2641329 +  -3.9  -3.54382   TTAATAATTTATTAA          GAATCATTC AAAGTA GAATGAATC           TTGCTTATCTTCCGA  52 286
D9T12_RS11560 2642445 .. 2642455 +  -2.6  -2.90212   ATTAGAATTTTATAA                 TATT AGA AATA                 TATCTAAAATGATAA  42 187
D9T12_RS11565 2643710 .. 2643762 + -13.6  -3.70307   TGCCACAGCGTAAAT TTCTCAAACCTTACCGGCCGGTAA CCTTC TTACCGGCCGGTAAGCATTCATAA TCTTTCTTGCATCAC 100 28
D9T12_RS11570 NONE
D9T12_RS11575 2645171 .. 2645185 +  -4.2  -3.60906   TGCAAAATTCCATTT               GCGTCT CGG ACACGC               CTTTTTCATTTCGTT  55 220
        typA 2647073 .. 2647096 + -10.4  -5.77988   CAGAACTCTTTAAAA          CCGCATTCGGA TTT TCC-AATGCGG          TTTTTTTATATCTCT 100 56
D9T12_RS11585 NONE
        cobN NONE
D9T12_RS11595 NONE
D9T12_RS11600 2654998 .. 2655024 +  -9.5  -3.66658   TCGGCTGTTCACGTT         TGCGTGATTAG CTCCA CTTATCACGCA         TCTTTTCGCGGTATT  81 58
         pip NONE
D9T12_RS11610 NONE
D9T12_RS11615 NONE
D9T12_RS11620 2659226 .. 2659248 + -10.6  -6.14618   TTAAAACATTACCGG           CCGGTTGGAA TTC TTCAAACCGG           TTTTTTTATTTTGTA 100 64
D9T12_RS11625 NONE
D9T12_RS11630 2660656 .. 2660668 +  -3.3  -3.48593   TTGAACGCATATCAA                TAGGC CAC GCCAA                TTCTATGACAACCTC  50 37
D9T12_RS11635 2661656 .. 2661708 +  -5.1  -4.12911   ACTTTAGCTATGCAG TCGATTCTGAATAACCCGTTT AATTTATGGCA AAGCCAGTTATTCAGAGTCGA TTATTTATGGGTTTA  63 52
D9T12_RS11645 NONE
D9T12_RS11650 2666011 .. 2666028 +  -8.4  -2.75844   TTTTTTACTAAAAAA             GCTGCG AATTCG CGCAGC              ATTTCCAATAACCAC  64 348
        hisB NONE
        hisH 2676555 .. 2676580 +  -3.4   -3.0806   TTAAGAATTTCTTAT         CTTGGAACGGT CATTA ATCGTT-CAAG         TATTCAAAGTTTAAA  45 9
        hisA NONE
        hisF NONE
D9T12_RS11715 2678613 .. 2678624 +  -4.4  -3.99407   CTTTTCTAAAAAACT                TACC GGCC GGTA                 TTATTTACGATTTAT  59 166
D9T12_RS11720 NONE
        tatA NONE
        tatB NONE
        tatC 2681610 .. 2681625 +  -3.2  -3.54129   GGGAACGAGTTCGGG              CTTACC TTTT GGCAAG               TTTAGCAACACTCTG  50 385
D9T12_RS11740 NONE
D9T12_RS11745 2684259 .. 2684276 +  -8.5  -2.79785   CCTCTAACTGCCAAA             GTTTACC GGCC GGTAAAC              ATTGTTGGGATATCA  66 41
        bioB NONE
        bioF 2689278 .. 2689291 +  -2.5  -4.10958   CAAATAATTCCATAT               TTTTT CTAT AAAAA                TTTAATGTTTTCTCA  55 49
D9T12_RS11775 NONE
D9T12_RS11780 NONE
D9T12_RS11785 2692868 .. 2692879 +  -4.4  -5.09895   AAAGAACACAATTAA                TACC GGCC GGTA                 TTTTTTAAATGCATC  76 26
D9T12_RS11790 NONE
D9T12_RS11795 2694482 .. 2694504 +  -7.1  -3.12895   CTTGGAAATGGATTG          C-GAGGCTTT CAAC AAAGCCTCAG           TCTCTTGATAAGGCA  63 130
D9T12_RS11820 2698543 .. 2698563 +  -6.9  -4.03234   CAGCAAATTTACAAA            GAGTATCTG TAA TGGATACTC            TTTCTATGAGGAAAA  73 42
D9T12_RS11825 NONE
D9T12_RS11830 2701134 .. 2701154 + -12.6  -4.78149   CCTTCAAACAAAAAA            GCCCCAGA AATAC TCTGGGGC            TTTTTACATTATCCA 100 55
D9T12_RS11840 2703357 .. 2703385 +  -7.5  -4.33928   TAATAAACGACAAAA        GGCCTACCTTAAT TAA ATTAAGATAAGCC        TTTGTATTTAAAATA  78 153
        recC NONE
        recB NONE
        recD 2715667 .. 2715679 +  -7.7  -3.65351   GCTGAGACGGCTTTC                GATGC TCA GCATC                TTTCAATCCGACTAG  70 486
D9T12_RS11890 2720878 .. 2720890 +  -6.3  -3.83205   GAACCAGGGACACAA                GGATT TTC AATCC                TTTGCTCTACCAACT  65 306
D9T12_RS11905 2722782 .. 2722796 +  -4.2  -2.64218   GGTCAAGGGAATTAA               GCGTTA CAA TATCGC               GTTGTAATGAAAGAT  47 26
D9T12_RS11910 NONE
D9T12_RS11915 2724591 .. 2724604 +  -5.3  -3.15663   AAATTTAACCTAGCT               CTGTT ACAC AACAG                TTGCTGCAAATAACT  55 63
D9T12_RS11920 2725448 .. 2725460 +  -6.3  -2.62111   CATAAATCATCGCGG                TCTCA TAC TGAGA                ATAGTTTTTTAGCCA  54 331
D9T12_RS11960 2735131 .. 2735149 +  -8.9  -3.72374   GGCTAAGCTGAACTC             GCTCAGA CCTCC TCTGAGC             TATTTCTTCCTAGAG  78 35
D9T12_RS11980 2745114 .. 2745127 +  -5.3   -3.2794   ACCACTTGATCTTCT               TTACC GGCC GGTAA                TTGATCTAAATAAAA  55 420
D9T12_RS11990 2747682 .. 2747694 +  -4.9  -4.68424   GTATCGGCACACATT                CTAAA ACC TTTAG                TTTTTCCATAAATTC  71 184
D9T12_RS11995 2748501 .. 2748524 +   -14  -5.80951   AAACATTCTACTCAA          GCCAGAAAAC TTAA GTTTTCTGGC           TTTTTTGTTTTGAAT 100 57
        rpoH 2749684 .. 2749700 +  -6.5  -5.60689   ATGACTTAAATTAAA              CCCGC TTTCACT GCGGG              TTTTTTATTGTCTAA  93 32
        ovoA 2752151 .. 2752182 +  -6.6  -2.72511   GCAAACACAAGCCAA      AGCATCACGACTCA TAAT TGAATTGTGATGCA       CTTTAAGCGCATAGA  57 64
D9T12_RS12010 NONE
D9T12_RS12015 2754675 .. 2754685 +  -2.4  -3.34414   CGAATCACCAACCAG                 ACGC TTT GCGA                 TTCATAATGTTTTTG  45 188
D9T12_RS12040 2758843 .. 2758853 +  -2.6  -4.48221   GTGGTAAATTAATCG                 TTTA GTT TAAA                 TTTTATGGGTTAATA  60 173
D9T12_RS12045 NONE
D9T12_RS12050 2761392 .. 2761402 +  -2.6  -2.57974   TTGATTGACTTTATG                 TTTT GAG AAAA                 TGCATTCATCGTAAT  41 45
D9T12_RS12055 2761888 .. 2761906 +  -2.3  -4.91429   CCTTTATTTCAGAAA             GTGGGCT TTATC GGCTCGC             TTTTATTTGAAATTT  66 50
D9T12_RS12065 2763445 .. 2763467 +  -7.9  -3.60296   TGATAAAAGCCCAAA           GATTCAATT AAGTC AATTGAATC           TTTGGGCTAGGGATG  69 192
D9T12_RS12080 NONE
D9T12_RS12085 NONE
D9T12_RS12090 2770720 .. 2770730 +  -6.8   -3.2218   ACCGCTTAGAAACTA                 CCCT TTT AGGG                 TTACTAACTCTTAGG  61 58
D9T12_RS12095 NONE
D9T12_RS12100 NONE
D9T12_RS12105 NONE
D9T12_RS12110 2774853 .. 2774870 + -11.3  -5.23316   ATAGCCTTTCCATTA             GCGAGGA AATT TCCTCGC              TTTTTTAATCTGATG 100 44
D9T12_RS12115 NONE
        fghA NONE
        recG 2779659 .. 2779669 +  -5.4  -3.73042   ATTCATAAAATGGCC                 GGAA TTC TTCC                 TCTTTTCCTAACCAA  60 72
D9T12_RS12140 2781858 .. 2781883 +  -9.7  -3.13836   CCAAACCTATTTTTT         GGAAGTTCCCA ACAA TGGGGACTCCC          TCTAATTATTTTTGC  77 86
D9T12_RS12145 2783200 .. 2783213 +  -3.1  -2.71263   CAAACGGGCACTTAA               TTGCG CCTG CGTAA                TCGTTAAAAACGCTT  42 334
D9T12_RS12160 2784947 .. 2784964 +  -8.5  -4.05446   CCATTCACTGACAAA             CTTTACC GGCC GGTAAAG              TTTATGATTGCCGAA  79 30
D9T12_RS12265 2805637 .. 2805672 +    -9  -3.03771   TGCTTTTCCTGAATC    ATGCTCCAGAGCCTAT AAAA ATAGTCGCTGGAGCAA     TCTTCAAGCCTCTAA  70 89
D9T12_RS12270 NONE
        proV NONE
        proW NONE
        proX 2810257 .. 2810273 +  -9.4  -4.28762   ATATAAACTAAAAAA              GGGAGC CAAAA GCTCCC              TTTTCCTAAAATTAT  86 48
D9T12_RS12330 2819187 .. 2819204 +  -7.1  -5.82388   GAAAAGGAATCCAGA             TAATACC GGCC GGTATTA              TTTTTTTTCGACTTT 100 63
D9T12_RS12340 2822613 .. 2822634 +  -6.5  -4.56978   GCAAATCTCAACAAA           GCACTCTCT TTCA GGTGAGTGC            TTTATTATTTACAAC  78 74
D9T12_RS12380 NONE
D9T12_RS12375 2827641 .. 2827653 -  -4.1  -3.16068   TCTTCAATCTAAAAT                CATCG TCT CAATG                CATATTGTGGTTTTA  48 175
D9T12_RS12370 NONE
        rnpA NONE
        yidC NONE
D9T12_RS12355 2824730 .. 2824751 - -10.9   -4.4267   CCTTAAAACGCAAAA           CGCCCACTA AAAA TAGTAGGCG            TTTTAACATTACCCT  95 96
        mnmE NONE
D9T12_RS12345 2822440 .. 2822457 -  -7.7   -4.1552   CATTGGTGGAAGAAA             CCTCTGC AGCG GCAGAGA              GTATGAGTGATCAAG  76 276
D9T12_RS12335 2819190 .. 2819201 -  -4.4  -3.56216   AAGGAATCCAGATAA                TACC GGCC GGTA                 TTATTTTTTTTCGAC  55 26
D9T12_RS12325 2815757 .. 2815773 -  -4.3  -3.59979   CGCTTTTATCTTAAA              GGAGGTG ATC CAGCCCC              AGCTTCCGCTAGGGC  55 4
D9T12_RS12320 NONE
D9T12_RS12315 2815409 .. 2815467 -  -8.1  -5.10163   AATTTCAAAATAAAA CTGTTAATAAATTTTCATTTAAAAACAA CTTG TCATTTTTAAAC-AAAACCTATTAACAG GTTTACTTTAAAGTG 100 39
D9T12_RS12310 NONE
         rrf 2811974 .. 2812001 - -12.1  -6.32216   ATAGACAAAAAAAAA        GCTGCTTACCC AACGAA GGATAAGCAGC         TTTTAGGATATAAGC 100 39
D9T12_RS12300 NONE
        queF NONE
D9T12_RS12290 2810257 .. 2810273 - -10.1   -5.4387   ATATAAACTAAAAAA              GGGAGCC AAA AGCTCCC              TTTTCCTAAAATTAT 100 48
        mnmG NONE
        rsmG NONE
D9T12_RS12250 2801485 .. 2801496 -    -3  -2.76696   GTTTTTTGCAAGAAC                TTAG ATGA CTAA                 AAACAGCCGATTAGA  42 36
D9T12_RS12245 NONE
D9T12_RS12240 NONE
D9T12_RS12235 NONE
        atpB 2798687 .. 2798704 -  -5.5  -3.56594   TTAAACCCTTTTAAA             GCCCCTC CGAA AAGGAGC              TTTAGATTTCATATT  58 54
        atpE NONE
D9T12_RS12220 NONE
D9T12_RS12215 NONE
D9T12_RS12210 NONE
        atpG 2794787 .. 2794803 -  -6.5  -2.98088   TTTCAAACTTATACA              GCCGCTG TAC CAGCAAC              GATTTCTGAAATTTC  60 2
        atpD NONE
D9T12_RS12195 2792890 .. 2792905 - -10.4    -5.626   TAGGGCATAAAAAAA              GCGAGC CGAA GCTCGC               TTTTTCAGTACAGGG 100 48
D9T12_RS12190 NONE
D9T12_RS12185 2788645 .. 2788664 -  -4.3  -4.15453   GAACTTAGCTCAAAA            CTCGCTA GGGCGT TAGCGAA             AAAGGCTTTTTTCGA  61 125
        glmU 2787160 .. 2787208 -  -6.2  -2.94144   CTTTTATTGAAATCA TCGCCGATA-TTTCGTGTGTCTT TGAA AAGACACACGAAAACATTGCGGA CTATTATTTCTTATC  56 29
D9T12_RS12175 NONE
D9T12_RS12170 2785847 .. 2785862 -  -6.8  -2.57721   CAAGTTATCAACGCA              TCGGAC ATTT GCCCGA               ATAGTCCACAATCAT  57 181
D9T12_RS12165 2784947 .. 2784964 -  -8.5  -3.92869   CCATTCACTGACAAA             CTTTACC GGCC GGTAAAG              TTTATGATTGCCGAA  77 27
D9T12_RS12155 NONE
D9T12_RS12150 2782658 .. 2782668 -  -3.2  -4.37658   AACCTTGGCACAAAA                 CCTC TAG GAGA                 AATCCTTTTTGATCC  61 410
D9T12_RS12135 NONE
D9T12_RS12130 2779418 .. 2779446 -  -4.5    -2.544   GAAGATATGAAAATC       CGCGGACCT-GG TGAAAT CCTAGGCACGCG        CCAAACAGGCGGTTT  47 297
D9T12_RS12075 2765290 .. 2765307 -  -6.3  -2.94412   CGTAAGTCCAAATCA             CAACGTC CGAA GACATTG              CATCCAAATTTCAGC  56 117
D9T12_RS12070 2763438 .. 2763474 - -20.5   -4.5442   TCCTCAATGATAAAA    GCCCAAAGATTCAATTA AGT CAATTGAATCTTTGGGC    TAGGGATGGGTTAAC 100 241
D9T12_RS12060 2761403 .. 2761420 -  -4.2   -4.3739   TATGTTTTGAGAAAA             TGCATT CATCGT AATGCA              TGACTGAATTCATAA  66 514
        aroK 2757304 .. 2757317 -  -3.1  -3.66541   AACAGACACTTTAAA               GCCTT ACCA AAAGC                AGCTTTAAGCCAAAT  52 30
D9T12_RS12030 2756127 .. 2756159 - -15.1  -2.53642   AAAATAATTGAATAG      TTAGGAACCTCTGAT TGA ATCAGAGCTTCCTAA      GCTTATGGTCGATAT  95 28
D9T12_RS12025 2755066 .. 2755081 -  -6.2  -5.03715   ACGACGCTCAAAAAA              GGTTTT AAAT AAAACC               ATTACCACTACAAAG  80 95
D9T12_RS12020 2754236 .. 2754246 -    -4  -4.12188   TCATTACCCTGAAAA                 CAAT CGA ATTG                 AACTTCGCTCAGTCG  61 294
D9T12_RS11985 2744500 .. 2744511 -  -5.8  -4.60746   GGAAAAAGATCAAAA                TGGG AAGT CCCA                 CTGGTTTAGTTTGCA  75 258
D9T12_RS11975 NONE
D9T12_RS11970 NONE
D9T12_RS11965 2734875 .. 2734893 -    -6  -4.84311   CGTGACACAAGAAAA             TGCGGT TGATCAT ACCGCA             TGTGTTCTCGGTAAA  78 359
D9T12_RS11955 2731282 .. 2731302 -  -2.5  -3.12595   GGCAACGACTGAACA            GTGAAGGCA CCA TAACTCCAC            ATTTAGGATTGTCCC  45 28
D9T12_RS11950 2729793 .. 2729805 -  -4.1  -4.67168   AAAAACCTGGAAAAA                TGTCC ACC GAACA                TCTGTACCATATCAT  66 203
D9T12_RS11945 NONE
D9T12_RS11940 NONE
D9T12_RS11935 NONE
D9T12_RS11930 NONE
D9T12_RS11925 2725048 .. 2725058 -  -5.4  -4.40221   AAACCAAATCGAAAA                 CTGT ACG ACAG                 CAAGCATCTAGTTGC  68 134
D9T12_RS11900 NONE
D9T12_RS11895 2720724 .. 2720748 -  -5.8   -5.4833   TCAGGTAATAAAAAA         CCCCAAGC-AT ATCA ATAGCTTAGGG          TTTAAATGTGGTGCG  91 34
D9T12_RS11885 NONE
        ntrB NONE
D9T12_RS11875 2715194 .. 2715211 - -11.3  -4.82901   TGGTCTTCAGAAAAA             GCTCGCT GACT AGCGAGC              ATACCGTAAAAATCA 100 38
D9T12_RS11855 2705646 .. 2705664 -    -3  -2.73624   GTAGTAATCAAAGAG             GGACTAAG ATG CTTTGACC             GCTTCGGTCAAAACA  41 10
D9T12_RS11850 NONE
D9T12_RS11845 2703357 .. 2703385 - -11.9  -4.67256   TAATAAACGACAAAA        GGCCTACCTTAAT TAA ATTAAGATAAGCC        TTTGTATTTAAAATA 100 56
D9T12_RS11835 2701134 .. 2701154 - -13.3  -5.63517   CCTTCAAACAAAAAA            GCCCCAGAA ATA CTCTGGGGC            TTTTTACATTATCCA 100 92
        cynS 2697092 .. 2697138 - -11.3  -5.08824   TTGGTACGTAAAAAA TCGACCCTAAAT-ATTCAA-CAG AAC CTGCTTGAATTATTCAGAGTCGA CTTAACACCTTAGCA 100 68
D9T12_RS11810 2696588 .. 2696603 -  -3.2  -3.95893   AAAACAGATAGTAAA              CCTCTT AAAG ACGAGG               CTTTTTAGAAAGCAA  55 60
D9T12_RS11805 2695645 .. 2695667 -  -4.2  -3.63655   CCATAACGAAATTAA           CCTCTAAAAA CTC TTTCTACAGG           CTTATTTAGAAACGC  55 43
D9T12_RS11800 2694382 .. 2694401 -  -5.8  -2.79289   TATTATTCTAAGAAC            CCTCCTGAT TCA ATCAG-AGG            TTCCCTAAAATAGAT  55 85
D9T12_RS11760 2686135 .. 2686145 -  -5.4  -2.93623   TTCCTCAAAATACTA                 CTCA ACT TGAG                 TTTGTGCAATCGCCC  53 12
D9T12_RS11755 NONE
D9T12_RS11750 2684259 .. 2684276 -  -8.5  -3.60792   CCTCTAACTGCCAAA             GTTTACC GGCC GGTAAAC              ATTGTTGGGATATCA  72 60
        ccoN 2673430 .. 2673474 -  -4.9  -3.21912   TCCTCAACTCATTAA TTCCGTTTTCTGCACCCCTGT AAA ACAGAGGTGCACACTACGTTA TGGATTAAGCAGTTG  53 30
        ccoO NONE
D9T12_RS11680 2672361 .. 2672391 -  -5.5  -2.82623   TTCTCCTCAGAATGA      TCGGAG-CTGTTGA GCTT CCAACAGTCTCCTA       GTCGTCATCATTAAG  52 23
        ccoP 2671162 .. 2671176 -  -7.1  -5.88197   TTAAATACAAAAAAA               CCCGA ACAAG TCGGG               CTTTAATGTTCAGTG 100 256
        ccoG 2669324 .. 2669354 - -11.2  -5.28176   TGCAGGTACAAAAAA       GCCCCACTAATGAA ATT TTGATTAGAGGGGC       ATTATAGCGATTAGC 100 98
D9T12_RS11665 2668483 .. 2668498 - -10.4  -5.56264   CTCAAATACAAAAAA              CGCCGA AATC TCGGCG               CTTAAAATTAACGAT 100 298
D9T12_RS11660 NONE
        ccoS 2665301 .. 2665319 -  -8.8  -4.15453   TAACTTAGCGCAAAA             GTCGGCAG ATG CTGCCCAC             GACATCAAGCAACTG  83 421
D9T12_RS11640 2661528 .. 2661543 -  -7.6  -2.53759   AACATCTGTAATTCA              CACGAT TTTC ATCGTG               CTAATGAATTGATAC  60 195
D9T12_RS11545 NONE
D9T12_RS11540 2637595 .. 2637606 -  -3.6  -4.09243   GACAGCGCTTTAAAA                CGGA TATT CCCG                 TCAGCGGAAGCGGTT  60 500
D9T12_RS11525 2635424 .. 2635435 -  -4.4   -3.1552   TTCCATTGATCAACA                CACT ATAT AGTG                 TTATCAGGCTTCCGA  51 16
        soxC NONE
D9T12_RS11515 2632574 .. 2632598 - -18.7  -5.00196   CTTTAAACAACAAAA          CCCGCAACTTC AAA GAAGTTGCGGG          TTTCTAGTAATCTTT 100 165
D9T12_RS11510 NONE
D9T12_RS11505 2630614 .. 2630629 -    -9  -4.18934   TACGATTGGAATAAA              GGGCTT CTAA AAGCCC               TTATATCCAAGGGTT  83 52
        moaA NONE
        moaD NONE
        moaE 2628484 .. 2628500 -  -5.1  -3.08133   GATTCACTTAGCGAA              CGCATTT TGA AAAAGCG              TCGAATTTGTCCGAG  52 190
D9T12_RS11450 2617315 .. 2617337 -  -3.4  -3.57309   GAAAATTGGCGCAAA          GGTGAC-CG CGTAAT CGTGCCACC           AGCGGCAACCGCTGA  51 197
D9T12_RS11435 2615172 .. 2615208 - -16.1  -4.07885   CACTTGGCGTTAAAA    TACAAAACGCCCGATGA AGT TCATCGAGCGTTTTTTA    CCTGAAAAAAGTGTC 100 90
D9T12_RS11425 NONE
D9T12_RS11420 2611382 .. 2611405 -  -8.2  -5.24799   CTATAAACACAAAAA          CCACCGTT TGAATTAC AACGGTGG           TTTACAGTCGGCAAA 100 84
D9T12_RS11415 2609152 .. 2609187 -    -4  -4.80487   TATAAGGAAAAGAAA    CCACCTTTTTCAGTAC ATTT GCACCAAAATAGGCAG     TTAAAAAACGAATTT  69 82
D9T12_RS11410 2606940 .. 2606961 -  -8.8  -2.60901   AGAGTTTCAAGCAAG           TAACGGCT TTTTAT AGCCGTTA            TGCGTTATAAACGAA  68 30
D9T12_RS11400 NONE
D9T12_RS11395 NONE
D9T12_RS11390 NONE
D9T12_RS11385 2600979 .. 2600995 -  -5.1  -2.95274   ATCAAAGAGACGAGA              GTGGTTC ATG GAACGAC              CTTTGTAAGCAGATC  52 14
D9T12_RS11380 NONE
D9T12_RS11375 NONE
D9T12_RS11295 NONE
        moaC 2580848 .. 2580869 -  -3.1  -3.69461   AGTAATCGAAAAAAT           CGCTCAACTT TTT AAGTT-AACG           TTGTGTATTTGAGGT  52 20
D9T12_RS11285 2579417 .. 2579441 -  -4.2  -2.76725   AAAATTATAAAAATC          GTCCGTCTTC TAAAT GGAGACGGAA          CCCATTTAGAACTCA  48 31
D9T12_RS11280 2578993 .. 2579007 -  -6.4  -2.84276   AGCGTCAATCAAGTA               TCGCTG TGT CAACGA               GATTAAATGACCTCA  58 114
D9T12_RS11270 NONE
D9T12_RS11265 NONE
D9T12_RS11260 2574757 .. 2574786 -  -5.1  -3.55444   CTCCTACTCTGGAAA       TCCGCCCATCTT AGAAAAA AAGA-GGGCAGA       ATTGAAACTTAAGGA  57 85
D9T12_RS11255 2572206 .. 2572222 -  -5.1    -4.386   CAATTTTTGATAAAA              CTTAGGG AAC CTCTAAG              CCTGTTGACCATTCA  68 91
D9T12_RS11250 2571648 .. 2571665 -  -4.9  -2.82933   CCTCAATGTACGACA             GTTCTGA CTTT TCAAAAC              AACTACTGGTGCATC  50 28
D9T12_RS11245 2571091 .. 2571122 -  -7.2   -2.6348   TCTAAAGCTTAGAAG      TCCCCTTCAACGAC AGTG GTTGTTGAGGGGGT       TATTGGTTTTAGGGG  60 59
        mnmC 2561858 .. 2561872 -  -2.8  -4.41609   CAGCATAAACACAAA               TAATCG ACA CGAATA               GTCACTGGAACAAAC  60 115
D9T12_RS11205 2559959 .. 2559973 -  -6.4  -4.72386   CAAAGCATTTAAAAA               GCCGTT GTA AACGAC               CTGTTAACTTCGATA  80 109
D9T12_RS11200 NONE
D9T12_RS11195 2558113 .. 2558145 -  -2.2  -4.11773   AAAGACTTTTGAAAA      TTTATTCACGGT AGATAAAAA ACCATAAATAAA      ATAACGCTCGACAAA  53 45
D9T12_RS11190 2557022 .. 2557038 -  -9.4  -5.93252   TTGAAAAATAAAAAA              GGGCTC ATAAA GAGCCC              TTAATAAGAAAGTGC 100 50
        gorA 2555548 .. 2555568 - -11.2  -4.99134   ACTCTAAACGAAAAA            GCCGAAAC GACCT GTTTCGGC            TTTTTTTATTGGCTT 100 62
D9T12_RS11175 2554386 .. 2554401 -  -7.6  -2.94561   ACGTCAATACAATCA              GAATGG TTGA CCATTC               TTCAACGCTTTTAAT  65 36
D9T12_RS11170 NONE
        mtnN 2553008 .. 2553044 - -16.1  -4.07885   CACTTGGCGTTAAAA    TACAAAACGCCCGATGA AGT TCATCGAGCGTTTTTTA    CCTGAAAAAAGTGTC 100 78
D9T12_RS11155 2549427 .. 2549442 -  -6.2  -4.27965   ACAAGCAAAACCAAA              TTCTAG AATT CTAGAA               TTCTATCGAAAATTA  69 95
D9T12_RS11150 NONE
D9T12_RS11145 2545519 .. 2545557 - -14.1  -5.03145   TAATCTTTTAAAAAA   CGATAGGCATTCTCTAA GACTA TCAGAGAATGCCTATCT   CAATCACATGTCTTC 100 29
D9T12_RS11115 2538435 .. 2538445 -    -4  -2.59191   TCAGATCTTTACAAT                 TTTC AAA GAAA                 TTAAAAAGAAACTGA  45 152
D9T12_RS11110 NONE
        fetB NONE
D9T12_RS11100 2535567 .. 2535586 -  -9.4  -3.35746   ATGAAATGACATCAA            TGCTTTCA CAAA TGAAAGCA             AAAATATCGAAAGTT  76 146
D9T12_RS11095 NONE
D9T12_RS11090 2532636 .. 2532649 -  -8.1  -5.05116   CCAGAAACAACAAAA               CCCCA AAAT TGGGG                CTCGAAGCACAAGAA  95 294
D9T12_RS11085 2531302 .. 2531326 -  -8.6  -4.19336   AAGCACTGCAAGAAA          TCGACCAAGC GATTA GCTCGGTCAA          TGAAATCGTCTCGGA  79 334
D9T12_RS11075 2527501 .. 2527529 - -11.8  -5.06414   CGCTCTTAACAAAAA       GCCCCGA-CGATT AAAT AACCGATCGGGGC        TTTTTTCATTTTGAA 100 79
D9T12_RS11060 NONE
D9T12_RS11055 2522780 .. 2522803 -    -8  -5.04868   CTAAACTAAATAAAA          CCGCGTTCAC CAAG GTGTTCGCGG           CTTTTTCATTTTAAA  89 73
D9T12_RS11030 2516517 .. 2516527 -  -5.4  -4.97461   AACAAACATCAAAAA                 CTTC TTT GAAG                 TACAAGTCGAAAATG  78 493
D9T12_RS11005 NONE
        grxC NONE
        secB 2507137 .. 2507151 - -11.4  -5.13722   TTCACCAAAAGAAAA               GGCGGT AAA ACCGCC               TTTTAATCTCTTCTA 100 56
D9T12_RS10990 2506022 .. 2506045 -  -7.4  -2.88134   TGAACTAAGCCAAAT          CGAGCACATC AAAT GCTGTGCTCA           GCTCGACTCCGCTTT  61 23
D9T12_RS10980 2504407 .. 2504425 -  -4.7  -3.54543   ACTTAGTTTTTTAAA             TTCTAAA TTATT TTTAGAA             AAGAGATTTTTTGAT  57 144
D9T12_RS10975 2503122 .. 2503163 - -15.5  -2.92951   TAGACTTCCATAAAC CAAAAAAACCCGTTTTGAA TGTT TTCAAAACGGGTTTTCTTT  ACATATATGACAAAA 100 48
D9T12_RS10970 2500918 .. 2500934 -  -4.3  -3.59979   CGCTTTTATCTTAAA              GGAGGTG ATC CAGCCCC              AGCTTCCGCTAGGGC  55 4
D9T12_RS10965 NONE
D9T12_RS10960 2500570 .. 2500628 -  -8.1  -5.10163   AATTTCAAAATAAAA CTGTTAATAAATTTTCATTTAAAAACAA CTTG TCATTTTTAAAC-AAAACCTATTAACAG GTTTACTTTAAAGTG 100 39
D9T12_RS10955 NONE
         rrf 2497135 .. 2497162 - -12.1     -6.13   ATATGCAAAAAAAAA        GCTGCTTACCC AACGAA GGATAAGCAGC         TTTTAGGATATAAGC 100 39
D9T12_RS10945 NONE
D9T12_RS10940 NONE
D9T12_RS10935 2494191 .. 2494203 -  -3.5  -6.06723   CTTTGCAAAAAAAAA                TTAAA AAA TTTAA                GATTTCACAGAGTCA  93 22
D9T12_RS10930 NONE
D9T12_RS10925 2493922 .. 2493945 -  -8.2  -5.76633   TTAGATACAAAAAAA          GCCTGTAACC CAAG AGTTACAAGC           TTTTAGAAACTGGTG 100 36
        fabA NONE
D9T12_RS10915 2492035 .. 2492061 - -10.3  -5.65177   ACAGGCATAAAAAAA        CCGGAAG-GATT TTAC AATCACTTCCGG         TCTCATTAAAACGCG 100 60
D9T12_RS10895 NONE
D9T12_RS10890 2485908 .. 2485921 -  -5.3  -3.12605   TTTATTTAAAACAAT               TTGGT GACT ACCAA                TCTTTGGTCAAAGCA  53 431
        rsmD 2481371 .. 2481389 -    -6  -4.56597   TCTTCTTTTGAAAAA             CAATGACA AAT TGTCACCG             GCCGGTAAAAAACTA  76 38
D9T12_RS10870 2480805 .. 2480824 -  -2.2  -4.86862   CTTAAAAAATCAAAA            GTTTATAA CTAT TTAAAAAC             CCTGTTTATTTACCG  64 50
D9T12_RS10865 2479902 .. 2479925 - -11.8  -5.71712   GTCTATACAAAAAAA          CCACAGCCTT ATTG AAGACTGTGG           TTTTTAATCTGCTCA 100 85
D9T12_RS10860 2479211 .. 2479244 - -13.5   -3.5399   ATGACATCTAGATAA     TTAAAATATGCTACC GGCC GGTAACATATTTTAA      TGTCATTGGAACTCT 100 57
D9T12_RS10845 NONE
D9T12_RS10840 2473823 .. 2473836 -  -5.2  -5.73339   ATAACTATAAAAAAA               CCGG ACTTTA CCGG                CCGGTCAAGTTAGTT  88 104
        modA 2472908 .. 2472924 -  -9.4  -5.28176   TTTACCTACAAAAAA              CTCGGC TGATC GCCGAG              AAAAGAATAAAGACT 100 95
        modB NONE
        modC 2471102 .. 2471116 -  -7.2  -3.06312   AAACTTTTTAGTTAA               TGAATC AGA GATTCA               ACAAACACCTCTATT  62 36
D9T12_RS10810 2468700 .. 2468712 -  -4.8  -3.34517   AGCGGTGTTTAAAGA                GCTC AGTTA GAGC                AAATTCATATTGCTT  55 89
D9T12_RS10805 2465678 .. 2465692 -  -5.8  -5.09245   TCAAAACGACAAAAA               TCAATT AGT AATTGA               CATAAAAAGCAACCT  83 104
D9T12_RS10800 2462750 .. 2462771 -  -8.9  -4.39407   TCAAAGAAGCGAAAA           TCAAGTAAT CTCC ATTACTTGA            TCTTCTTAAAAACCC  90 119
D9T12_RS10770 2456863 .. 2456881 -  -3.1  -4.55673   AAATAGAGGACAAAA             GACGATT TTCAC AAACGTC             CAATACGAAAAAGAA  64 55
D9T12_RS10765 NONE
D9T12_RS10760 2454495 .. 2454521 -  -8.7  -2.74078   AGGAAAGCAAAGTTA         GCAGGCCGACA TGAAT TGTCTGCCTAC         TTTTTTGAGGACTTA  67 91
       coaBC NONE
D9T12_RS10745 2451151 .. 2451169 -  -7.4  -3.34013   CACTCTCCTAAGGAA             CCGCTGAT CGA ATCAGAGG             TTCCCTTATGAACCT  65 145
D9T12_RS10740 NONE
D9T12_RS10735 2449690 .. 2449703 -  -3.9    -3.737   GAACTTCCCACCAAA               GTAAA CGCA TTTAC                AAACACTTCAAACGC  54 60
D9T12_RS10715 2446051 .. 2446086 -  -9.1  -4.67641   ACCTCAAAACGAAAA   GCTGACAGCGAACAGGC TTCT GCC-A-TCGCCGTCAGC    CTGTTCCCTCTGATT  90 81
D9T12_RS10685 2441143 .. 2441157 -  -2.8  -5.01732   AAGCTTCCGAAAAAA               CGCT CAACAAC AGCG               TTGTACCCTCAAGGG  68 45
D9T12_RS10680 2440764 .. 2440788 -  -2.1  -5.35365   AAAAGATAACAAAAA          TTCAACAGG CCTGTAT CCTGTCGAG          GTTCAGTATGTAAAC  75 205
D9T12_RS10665 2438281 .. 2438299 -  -7.4  -2.95298   TTCAGCTAGCAGATA             CTCGCCTC TAT GAAGCGAA             AACTGCTGGTAGAAA  61 146
D9T12_RS10655 2436235 .. 2436264 - -18.7  -3.20747   ATTAAAGTCTATTAA       CGGATTCCCACGC TTCT GCGTGGGAATCCA        TAAGCTTGTGCCAAC 100 80
D9T12_RS10615 NONE
D9T12_RS10610 2424956 .. 2424989 - -13.9  -3.80535   AACTTTCATAAAATA     CCGGCCGGTACAAAA CAGT TTTTCTGCCGGCCGG      TCAAGTTTCATGCGC 100 33
D9T12_RS10600 NONE
        argB 2422265 .. 2422277 -  -3.3  -4.25566   AATAATTACTCAAAA                GCCAT GGA AAGGC                AATAATTTTTAGACT  59 52
D9T12_RS10590 2421336 .. 2421362 -    -8  -5.79595   CCTTAAAATAAAAAA         GGCACAGAGTTA CGA CAACCCCATGCC         TTACACACCACTTTC 100 55
D9T12_RS10585 2420446 .. 2420460 - -11.4  -5.80364   ACTTCAATAAAAAAA               CCGCCT ATT AGGCGG               TTTTTTTATTCACAT 100 83
D9T12_RS10560 2416435 .. 2416458 -   -11  -2.85446   GACAAACTTATGACA          GCAAGCTGAG TTAA CACAGCTTGC           AATAGAGGAAATGAG  79 72
D9T12_RS10555 2415089 .. 2415102 -  -6.7  -3.33711   GATTTAGAAACCGAA               GCCAA AAAC TTGGC                TGATGCAGGATTTGA  61 171
D9T12_RS10525 NONE
D9T12_RS10520 2403204 .. 2403227 - -10.4  -5.52096   AAATCTAACAAAAAA          GCACGTAAAC CGAA ATTTACGTGC           TTTAAAACATTACCG 100 170
D9T12_RS10515 2402342 .. 2402371 - -11.5  -3.86015   TACTCTGTTTAGAAA       CCAGCTTAACGTC AACA GACCCTAAGCTGG        TTAGCTCCGACAAAC  91 45
D9T12_RS10500 2397793 .. 2397815 -    -2  -4.19336   AATGACTCCAAGAAA           TACGCAAAAC ACG GTTTTGTTTA           CGATGAAAAACGACC  55 440
        folM NONE
D9T12_RS10465 2390625 .. 2390658 - -13.9  -5.54885   AAGACCAATAAAAAA     CACACCGGCCGGT TTATTTTT ACCGGCCGGTGTT      TTTCTATAACGTTTC 100 47
D9T12_RS10450 2387711 .. 2387722 -  -4.4  -2.60199   TTTAACCAAAGACAT                GAGT GACT ACTC                 CTAATTAATCATTTC  47 60
D9T12_RS10445 2385670 .. 2385707 - -13.6  -3.54488   TTTTTCGAAATAAGA   TACCGGCCGGT-AACAT TATTT ATGTTTACCGGCCGGTT   TTGTTTTGCAAGCTT 100 79
D9T12_RS10415 2365551 .. 2365592 - -17.7  -3.24021   CTTTTAAACAGGCAA TAAA-AAACCCTCGGACAAC ATT GTTATCCGAGGGTTTGTTTA GGCAAGATTAACGTC 100 60
D9T12_RS10400 2357208 .. 2357227 - -10.7  -6.06529   TAGACATAAAAAAAA            GACCGCC ATTTTA GGCGGTC             TTAAAAGTTTGTAAG 100 66
D9T12_RS10395 2356126 .. 2356138 -  -3.4  -4.08939   CAACAGTTACACAAA                TTGG TCTAC CCAA                TCACTCTATTTGGAA  58 369
D9T12_RS10380 2353287 .. 2353302 -  -2.6   -4.3351   ACAAAATTCAATAAA              CTTG-AC TGA GTGCAAG              AATTTCTTAAACTCA  57 62
        erpA NONE
D9T12_RS10370 2351638 .. 2351655 -  -6.3  -3.04398   TGTCGTCTTTAAAAT             GTGGATA CTCC TACCCAC              GCTCATCCATTGGCA  56 18
        glyQ NONE
D9T12_RS10345 2345429 .. 2345446 - -11.3  -6.11229   ATCAAAACAAAAAAA             TTCCCGC GTTT GCGGGAA              TTCTTAAAACCAATC 100 45
        gmhB NONE
D9T12_RS10335 NONE
D9T12_RS10330 NONE
D9T12_RS10325 2342070 .. 2342080 -  -2.4  -3.38272   TACGAGCACTCATAA                 CTCG CCT CGTG                 CAATGACAGAATCAT  45 9
D9T12_RS10320 2341140 .. 2341162 -  -6.3  -3.59315   GTAACGAGTTCGAAA           TCGCCAGAT GGTGA ACCTAGCGA           GATAAAACGAAACGA  61 250
D9T12_RS10305 2337300 .. 2337318 -  -4.7  -4.08216   GGATTGCTCTGAAAA             TCTATTT CATAC AAATAGA             ACCGTATCTCTCAAG  63 8
D9T12_RS10275 2331601 .. 2331613 -  -7.7  -2.95481   AAAGACGCCATAAAT                CCTTC TCT GAAGG                CTTTTATACCCGAAT  65 120
        parC NONE
        motA 2328275 .. 2328286 -    -3  -3.34517   ACCGGCCGGTAAATA                TTCT TTCA AGAA                 CTTCTCCCTAAAAGC  46 60
D9T12_RS10260 2327125 .. 2327147 -  -4.1  -4.07568   GGGTTTGCTTTAAAA           CCCAAAAAC CACTC GTTTCAGGG           GCAGCCATTCGCTGG  59 353
D9T12_RS10235 NONE
D9T12_RS10230 2320654 .. 2320665 -    -3  -3.01712   GGCTCCTGTTGAAGA                CAAA ATGA TTTG                 GGGAATTCGAGAGGT  43 47
D9T12_RS10225 2319633 .. 2319650 -  -8.4  -4.39571   CCTAGAAACGCAAAA             CCCCAG ACTAAG CTGGGG              TTTTGTTTAGAGCGG  86 52
D9T12_RS10220 2318834 .. 2318853 -  -5.8  -2.61274   TTTAGTTTAAGCAAT            TAAAGGCT TATT AACCTTTA             CGCTTAGGCTTACCG  54 16
D9T12_RS10215 NONE
        ychF 2317021 .. 2317063 - -13.7  -2.90349   TTTTCAAAGGCAAAG CTGTTAAATGAAAGCGTAC AACGA GTACGCGTCCATTTAACAA TGCAGGACTTGGAAA 100 65
D9T12_RS10205 2316680 .. 2316695 -  -6.8  -5.64274   TTAGGCATAAAAAAA              GCCGTC ATAA GACAGC               TTAATTTAGAAATAT  93 40
D9T12_RS10200 2315188 .. 2315201 -  -5.3   -2.5178   ACAATAACACAAACT               CTATG ATTC CATAG                CTTGGGGCAAGCGGG  51 101
D9T12_RS10195 NONE
D9T12_RS10190 2313089 .. 2313110 -  -7.3  -5.76237   TATAGAAACAAAAAA           GCCCGAA ACGCTATG TTCGGGC            TTTAAAAATATGGTG 100 137
        gspC 2311928 .. 2311941 -  -2.3  -2.57132   GGTTTCCGCTAGAAG               CGTTG AGGG CATCG                AAGCGGCAAAAGCCA  40 179
        gspD 2309835 .. 2309847 -  -3.4  -3.98484   AACTTAATTCAGAAA                TCAC TACCG GTGA                TCTCCTCAAACGCTT  55 6
        gspE 2308356 .. 2308367 -  -2.2  -2.66899   TTCGAACGAATTAAT                GAGC GGTC ACTC                 GAATCACTTCTTCAA  40 9
        gspF NONE
        gspG NONE
        gspH NONE
        gspI NONE
        gspJ 2304848 .. 2304858 -    -4  -3.05463   ACCGCTTGCATTGAA                 TTCA TTT TGAA                 GCCGCCTCAGCAAAA  47 16
D9T12_RS10145 NONE
D9T12_RS10140 NONE
D9T12_RS10135 2301767 .. 2301778 -  -2.2  -4.18494   GACGCTTAGGCAAAA                CGCT TACC AACG                 TTGGAAGGCTAAAAC  56 41
D9T12_RS10130 2300542 .. 2300554 -  -3.3  -3.58269   GAAGCGAGTTCGAAA                TCGCC AGA GGCTA                AGCGCTAGTTGGACT  50 297
D9T12_RS10125 2299450 .. 2299462 -  -2.7  -4.15854   AAAGCCACTGGAAAA                TGAAA GAC TTCCA                AGGTCGTGAAATCGA  57 358
D9T12_RS10085 NONE
D9T12_RS10080 NONE
D9T12_RS10075 NONE
        hslV 2289272 .. 2289283 -  -2.2   -2.7127   CCATCGAATTAGAAC                GTGC ATCA ACAC                 AAGCATTTTTTACAT  40 152
D9T12_RS10065 2288635 .. 2288650 -    -9  -5.96894   ATCCAAACAAAAAAA              CCAAGC ATTT GCTTGG               TTCTTTTAAAAAATC 100 117
        glgC NONE
D9T12_RS10045 2282408 .. 2282425 -  -6.3  -4.16837   CACAACGACAAAGAA             GTG-GGCT GGA AGCCTCAC             CCACAAGGGCTTAGC  67 159
        malQ NONE
        glgB NONE
        glgA 2276775 .. 2276787 -  -3.4  -4.07568   GGCGTTTTTGTAAAA                CTTC GCTTG GAAG                GGCATTCTGCACCTG  57 43
D9T12_RS10025 2274232 .. 2274258 -  -8.1  -5.67063   TCCAGCATAAAAAAA        GCCCGAATACTC AAAC AAG-ATTCGGGC         TTCATTTATAAGCTA 100 65
D9T12_RS10020 NONE
D9T12_RS10015 NONE
D9T12_RS10010 NONE
D9T12_RS10005 NONE
D9T12_RS10000 NONE
D9T12_RS09995 NONE
D9T12_RS09990 NONE
D9T12_RS09985 NONE
D9T12_RS09980 NONE
D9T12_RS09975 2263818 .. 2263839 -  -2.4  -5.37345   CTCAACCAGAAAAAA           CAGAGTAAA TTTTT TTTACTC-G           ATTTGATTTATTGAT  73 33
D9T12_RS09970 2263157 .. 2263170 -  -9.5  -5.60689   TTAGACAATAAAAAA               CCCGC CGAA GCGGG                TTAAAATTATAGAAG 100 57
        miaB 2261462 .. 2261507 - -12.7  -5.60556   AATATAAAACAAAAA CAAACCGGCCGGTAAGATTTT AAGA AAAACTTTACCGGCCGGTACA AAACAATAATAAACG 100 72
D9T12_RS09960 NONE
        ybeY 2259838 .. 2259848 -  -2.6  -3.19048   TCCTAATCAATAAAT                 TTTT TTT AAAA                 GCTACCGGCCGGTTA  45 76
D9T12_RS09950 2258890 .. 2258907 - -11.3  -5.93809   TTTTGACAAAAAAAA             GCCAAGC ATTT GCTTGGC              TCTTATTTCACACAG 100 49
         lnt 2257069 .. 2257085 -  -4.4  -3.61988   TGATTGATAAAGCAA              TGAGTC TGGCT GACCCA              ACCGACATTACAGTT  54 264
D9T12_RS09935 NONE
D9T12_RS09930 NONE
        holA NONE
D9T12_RS09920 NONE
        nadD 2250372 .. 2250401 -  -5.2  -2.74501   ATGAATTTCTTAAAT       CTGTATCAGGTCT TATTC AGA-CTGATACAA       TTTTTTATTTTGAAT  49 8
        rsfS NONE
        rlmH 2249413 .. 2249431 -  -8.9  -2.89797   GGCGGATAAAGACGA             CGTGTAC AGTTA GTACACG             AGTTTTTATCCAACA  69 66
D9T12_RS09890 2247134 .. 2247155 -  -6.5  -5.60993   TTGGGTATAAAAAAA           CCGAAGGCT TTGA AGACTCCGG            TTTTGCTTACGCTAA  93 55
        murJ 2245480 .. 2245492 -  -3.3  -2.57881   TAACCTTCTCACAAT                TACGC CTT GCGAA                TAAACCGTTTAGGAT  43 12
D9T12_RS09880 2244719 .. 2244735 -  -3.6  -2.91298   AAAATCAAAAATTTA              GCGCGA AATTA TAGCGC              AAATAGCGGTTACTC  46 35
D9T12_RS09875 2243726 .. 2243738 -  -9.1  -2.82623   CTCTCTTCACAATTA                GCGGT TAG ACCGC                GGCTCAAAGTTTGAA  69 29
D9T12_RS09870 2240422 .. 2240444 -  -7.1  -5.64873   CTTAATAATAAAAAA          CCACGCAAGT TTTC ACTT-CGTGG           CTTGTTCTACATTCT 100 438
D9T12_RS09865 2239764 .. 2239780 -  -9.5  -3.09896   TTTAGATATAGAAAC              GATTGTC ACT GACAATC              TCAAAGAGCACCTAC  72 146
        rlmL 2230822 .. 2230840 -  -3.1  -3.60296   TATGTTGATTCTAAA             GAAGCCT ACGAA ATGCTTC             AAACAGACCCTACTG  51 519
D9T12_RS09780 2218816 .. 2218843 -   -10  -5.82036   ATAAGAAATAAAAAA        CCCCAAA-GTTGA TAT CCAACATTTGGGG        TTAATTTATCAGCCA 100 395
D9T12_RS09775 NONE
        hemN 2215647 .. 2215664 -  -4.9  -4.86731   GTTTCCGAAAGAAAA             CTAACTT TCCC AAGTCAG              ACGTATCAAATCTAA  74 171
         ffs 2214292 .. 2214311 -  -2.8  -3.42366   GCCAAAACCGTATAA            CTCATAGA CCTA TCCCTGAG             AAAAACAATAATTTA  46 162
D9T12_RS09755 2211600 .. 2211628 -  -2.5  -4.81082   AATTAATTAATAAAA        CCTGTTTACAA GTTCATA TCGCAAACAGA        AATCATATCTTTAAT  65 102
D9T12_RS09750 2211225 .. 2211241 -  -4.5  -4.06687   ACTTTGCACAAACAA              TTCCAAT TCA ATTAGAA              GGGCATTTTCATACC  61 20
        recR NONE
D9T12_RS09740 2208678 .. 2208692 - -11.4  -5.77988   ACACACATAAAAAAA               TCCCGC AAT GCGGGA               TTTTTTATAGTTAGA 100 53
D9T12_RS09725 NONE
D9T12_RS09720 2204978 .. 2205005 -   -10  -5.42514   CTAGAAACTAAAAAA        GCCGCC-AATCAA TTG TTGATTTAGCGGC        TTTTCTGTTTATCAG 100 50
D9T12_RS09695 NONE
D9T12_RS09690 2197797 .. 2197811 -  -7.8  -2.71101   TCTTTAAACAACTTA               CACCGC ATG GCGATG               ATATTTGGCTTTACT  60 231
D9T12_RS09680 NONE
D9T12_RS09675 2194677 .. 2194694 -  -2.7  -3.93556   AGTCATGCAATGAAA             CTCAAAA GGGA TATTGAG              GTTATTTTTGACCAT  52 125
D9T12_RS09670 NONE
D9T12_RS09665 2193070 .. 2193089 -  -2.1  -4.65078   AGATTGGCAACAAAA            GTGAATG GCTGCA CTTTCAC             CTAGTTTTTCGAAAT  63 194
D9T12_RS09655 NONE
D9T12_RS09650 2190458 .. 2190471 -  -5.3  -2.63991   GTGAACTTAACCAAT               TGAGA AACC TCTCA                CTTATGCCCTTAGCA  51 101
D9T12_RS09645 2186649 .. 2186674 - -11.3  -4.18676   CCATAAACCAAATAA         CCCATTTTGAA TGTT TTCAAAACGGG          TTTATATAAAGTCGC  90 58
D9T12_RS09640 2184439 .. 2184455 -  -4.3  -3.59979   CGCTTTTATCTTAAA              GGAGGTG ATC CAGCCCC              AGCTTCCGCTAGGGC  55 4
D9T12_RS09635 NONE
D9T12_RS09630 2184091 .. 2184149 -  -8.1  -5.10163   AATTTCAAAATAAAA CTGTTAATAAATTTTCATTTAAAAACAA CTTG TCATTTTTAAAC-AAAACCTATTAACAG GTTTACTTTAAAGTG 100 39
D9T12_RS09625 NONE
         rrf 2180656 .. 2180683 - -12.1     -6.13   ATATGCAAAAAAAAA        GCTGCTTACCC AACGAA GGATAAGCAGC         TTTTAGGATATAAGC 100 39
D9T12_RS09615 NONE
D9T12_RS09610 2177661 .. 2177675 -  -2.8  -3.08522   CACTCATCGTAAAAC               CTACTG GTA CAGTAT               TTACCTCTGTTTCAT  43 77
D9T12_RS09605 NONE
D9T12_RS09600 NONE
D9T12_RS09595 NONE
D9T12_RS09590 NONE
D9T12_RS09585 NONE
D9T12_RS09580 NONE
D9T12_RS09575 NONE
D9T12_RS09570 2167282 .. 2167294 -  -6.3  -3.64162   ATGAATTATCCCAAA                TGGAA CAA TTCCA                GTTGAAACACTTTTG  63 471
D9T12_RS09560 2166331 .. 2166345 -  -7.1  -3.27022   TTGATTTTACACCAA               GCGCT TCGTG AGCGC               TTACCAGGTTATTTA  64 78
         efp NONE
        genX 2163748 .. 2163768 -  -2.5  -4.39318   TAATTAAATTTAAAA            GCGCTTG GTTAATT CAAGCGT            CTTTAATTCCAAATG  60 18
D9T12_RS09535 NONE
D9T12_RS09530 NONE
D9T12_RS09525 NONE
D9T12_RS09520 2160653 .. 2160663 -  -2.4  -4.08144   TCTAGCAACCAGAAA                 GCAC ATT GGGC                 AATTTGAAAACGAGT  53 57
D9T12_RS09515 NONE
D9T12_RS09510 NONE
D9T12_RS09505 NONE
D9T12_RS09500 2154019 .. 2154047 -  -9.5  -4.55295   CCCCCGACAAACAAA        CCTAAAGCGCCGG AAT CCGACGGATTAGG        AACCGGGCAAGGCGA  91 500
        gatC 2143594 .. 2143606 -  -4.1  -3.69395   CTTATCATTCAATAA                CTTGC GGA ACAAG                ATACATGTCTTTTGC  54 2
        gatA NONE
        gatB 2140616 .. 2140650 -  -6.5  -3.15241   AATAGACAGGTAAGA     GCCTGCACAATAGAT TACTT ACCTATTGCGCAGAA     TTTTCATCAGATTAG  61 37
D9T12_RS09430 NONE
D9T12_RS09425 NONE
        htpX 2138134 .. 2138160 -   -21  -6.06529   CAGACATAAAAAAAA         CCGGCCGGTAAA ATA TTTACCGGCCGG         TTAATTAATAGCAAT 100 58
D9T12_RS09390 2132239 .. 2132262 - -11.6  -5.45652   ATCGGCAATAAAAAA          GCGCGCCAGG CAAT CCAAGCGCGC           TTTCAAGAACCGTGT 100 54
D9T12_RS09375 2130002 .. 2130017 - -10.4  -4.02206   AACCCAAACAGTAAA              CCCTGC AAAT GCAGGG               TTTTTTATTATCTTA  89 126
        guaB 2127803 .. 2127842 -   -21  -4.87626   TTCTAAGACTAAAAA  CACACAAGGCTTTTGTGG AATT CCACAAAAGCCTTGTGTT   TCATTAAAGGTTTAC 100 48
        guaA 2126122 .. 2126133 -  -4.4  -4.81734   AAACACCATGAAAAA                GTCA TTGA TGAC                 ACAAACAACATTGTT  71 85
D9T12_RS09350 2123508 .. 2123535 - -12.1  -2.74461   TATCTATTTCCAAAG        GAGGATGTACC TAATTG GGTACATCCCC         AAGAATTGCTTGTGT  83 223
        tadA 2122374 .. 2122386 -  -2.7  -3.08314   GTGAAGGTTTAAAAG                CTATT TGT AACAG                AGCCTTTAAATAATT  43 102
        cheD 2121695 .. 2121708 -  -3.9  -3.22906   TCATGTCCATAAAAG               TATTC CTCA GAATA                ATTCAACATCGCCCT  48 18
D9T12_RS09335 NONE
D9T12_RS09330 2118911 .. 2118927 -  -9.4  -6.04324   CTAAAAAACAAAAAA              GCGAGC ATTAA GCTCGC              TTTTAAAAGGTCATT 100 52
        htpG 2116701 .. 2116725 -   -13  -5.64873   TTGAATAATAAAAAA          GGCTCGAAAA TGATT TTTTCGAGCC          TTTAACAATCGAGCT 100 81
        clpB 2113939 .. 2113965 - -10.2   -5.4833   TTAGGCAATAAAAAA         CCCCACTTCTAA AAA CTAGAAGTGCGG         TTTAATGTTTAAAGC 100 48
D9T12_RS09315 2113430 .. 2113447 - -11.3  -4.98672   GCTAAAAACACAAAA             CCCAGCA AAAC TGCTGGG              TTTATACAAAAACTG 100 95
D9T12_RS09310 2112237 .. 2112248 -  -4.4  -3.53091   ATCCCTGGCTTTAAA                TGCA TTCG TGCA                 GATGGCGCTTTCTAC  52 345
        uvrB NONE
D9T12_RS09295 NONE
D9T12_RS09290 2107197 .. 2107223 - -14.6  -3.19192   CCTTACTGAACCTAA         TGCCGAGAACTT GAA AAATTCTCGGCA         CTCTTACTTAGTCGA 100 90
        lptF NONE
        lptG 2099136 .. 2099160 -  -7.1  -4.19276   GCAAAACGGGGAAAA          CGTTATCCGAT TTA ATCGGAGATCG          TGCCAAACGATTCCC  73 441
D9T12_RS09230 2093204 .. 2093218 -  -2.8  -4.71426   CCTGCACCAATAAAA               TTGCTA AAT TTGCAA               CAAATCGCTTTCCTG  62 14
D9T12_RS09225 2092251 .. 2092277 - -22.4  -5.71983   TTAACCATAAAAAAA         CCGGCCGGTAGA AAC TCTACCGGCCGG         TAAAAACCAACTCAA 100 89
D9T12_RS09220 NONE
D9T12_RS09215 2091130 .. 2091155 - -12.7  -6.07374   ATAAAAAACAAAAAA         CCCGCTT-GAGA ATT TCTCGAAGCGGG         TTTTGCAGGCAACCA 100 75
D9T12_RS09210 2089886 .. 2089907 - -10.1   -5.4833   TTAGGCAACAAAAAA           CCCCAGGCT TTGA AACCCGGGG            TTTTCGCATCAAGCT 100 71
D9T12_RS09205 NONE
D9T12_RS09200 2087448 .. 2087472 -  -8.6  -5.64304   TAAGACAATAAAAAA          CCCGATTAAG ATAAA CCTAACCGGG          CTTTAAACTTCAAGC 100 59
D9T12_RS09185 2084317 .. 2084351 -   -16  -3.26319   AACTTGGCATACGAA     CACAAAAAAAGGATGT CAA ACATCCTTTTTTTGAG     CCCAAACTAAGCCCG 100 175
D9T12_RS09180 NONE
D9T12_RS09175 NONE
D9T12_RS09170 2078237 .. 2078258 - -10.9  -5.65177   ATAGGTATAAAAAAA           CCGAGACAA TGAT TTGCCTCGG            TTTCAACGTTCACCT 100 92
D9T12_RS09165 2077536 .. 2077551 - -10.4  -5.71712   TTGGAGATAAAAAAA              CCGGCT TTAA AGCCGG               TTTTAATAAAGCATG 100 55
D9T12_RS09160 2077266 .. 2077284 - -10.3  -5.64274   TCAGGCATAAAAAAA             GGGTTCC GATTT GGAACCC             TTTGTAAATAGTGGC 100 37
D9T12_RS09155 2075805 .. 2075816 -  -5.8   -2.9675   TAGCCCAGAATTACA                GCGT CAAG ACGC                 GCTAAAAAATTGGAC  54 406
D9T12_RS09135 2071595 .. 2071621 -  -5.2  -3.38609   AACTTAACAGACCAA         GAGAAACGACAA TTG TTCCCATTTCTC         AAAAACGATTATTAG  55 67
D9T12_RS09105 2063833 .. 2063869 -    -7  -2.64472   TAGCTCCTAAATCTA   GATTTTAAGGCTTAGTTA AAA TAA-TA-GCCTTAAAATC   ATCCAGTAAGAAAAA  60 180
D9T12_RS09100 NONE
D9T12_RS09095 2062315 .. 2062328 -  -2.3  -3.74626   ATGAAAGGACTTAAA               GCTAC TCTG GTTGC                AGGGCTTATAGTAAC  51 441
D9T12_RS09085 2060738 .. 2060760 -  -4.8   -4.3739   CACTCCGTCAGAAAA           CGATGACGAA TAC CTTGTCACCG           CGACAGTTCAAAACA  66 194
D9T12_RS09065 2058462 .. 2058479 -  -4.9  -3.68506   GAATAGCCAGTCAAA             GCCAATT AAAT AATTGAC              TTAAATGCAGTATAA  59 98
D9T12_RS09060 NONE
        radC NONE
D9T12_RS09050 NONE
D9T12_RS09045 2055657 .. 2055667 -  -2.4  -2.90075   TTTGGGTGAATTAGA                 GCCG CTG CGCC                 ATGAAAGCAGGTGCC  41 10
D9T12_RS09040 2054159 .. 2054176 -  -3.5  -3.08464   TTATTAGCGATTCAA             CAGAAGAG TTG CTCTT-TG             AACTAATGAAAAATT  48 393
D9T12_RS09030 NONE
D9T12_RS09025 2052870 .. 2052881 -  -4.4  -2.73028   AAACAGTTAGAGAAG                GTTC TTTC GAAC                 ACCAAACTTGAGTGT  47 5
D9T12_RS09020 2050957 .. 2050978 - -10.1  -5.40625   AGAGCACACAAAAAA           GGCCAGCCA TTTC TGGCCAGCC            TTTAAGTTCACTACT 100 52
        dptF NONE
        dptG 2046285 .. 2046295 -    -4  -3.71649   CCCTTAAATTTGAAA                 TGAA GTT TTCA                 TTCATTTCACCTTCA  54 248
D9T12_RS09000 NONE
D9T12_RS08995 NONE
D9T12_RS08990 2039290 .. 2039314 -  -8.7  -4.35518   AATCGGACATTAAAA          TACTTCCATAA AAT TAATGGAAGTA          ATTATTACACACAAG  83 63
        dndB NONE
        dndC NONE
        dndD NONE
D9T12_RS08970 NONE
D9T12_RS08965 2033666 .. 2033683 -  -8.5  -5.43974   AAAACTAAATAAAAA             CTTTACC GGCC GGTAAAG              TTTTAAAAGCGTCAA 100 398
D9T12_RS08960 NONE
        recA NONE
D9T12_RS08950 2030902 .. 2030943 -    -8  -5.95286   ATCAAAAATAAAAAA CTTTACCGGCCGGTAAAT AATTCA ATTGACCGGCCGGTAGTA  AACTTTTGTAAGAGA 100 46
        alaS 2028219 .. 2028250 - -16.7  -6.06529   TACACATAAAAAAAA      CCGGCCGGTAAAT TCTCAT ATCTACCGGCCGG       TTAGTTTTACAGGGT 100 52
        csrA 2027679 .. 2027691 -  -4.1  -3.53811   TTGAGTTTTTGTAAA                CCTCT TAA AAAGG                ATTTTTTTATCTTTA  52 156
D9T12_RS08935 2027168 .. 2027194 -  -8.9  -2.53382   ATCATTCTCAATTTA        GAGGAGA-CAAT ATAT ATTGATCTCCTC         TTATCAAGAAGCTTT  68 377
D9T12_RS08925 2022415 .. 2022431 -  -4.5  -3.60818   CGAAAACTTGTCAAA              CGTTTTT TGA AAAAACA              TTCCGCTTTTTTCAA  55 115
D9T12_RS08920 2022249 .. 2022259 -    -4  -4.15508   AACTAATGTTCAAAA                 TAAC CCT GTTA                 ACAATTAATTTTGAA  58 58
D9T12_RS08915 2022101 .. 2022127 -  -8.1  -5.60689   TCAGACAATAAAAAA         CCCCGCTTAAT ACATG ATTAAACGAGG         TTCTTAAATAATGGC 100 37
        pcnB 2018624 .. 2018648 -  -4.2  -2.67713   CCATAAGATAATTTA          CCGGCCGGTA GAAAA TATCAGCCGA          TTCGCAATCATTCAT  47 33
        folK 2018037 .. 2018052 -  -6.2  -3.22448   TGAAACCTAAGCGAA              TTTACC GGCC GGTAAA               ATGAAATTTACAAAT  58 41
        panB 2017181 .. 2017194 -  -3.1   -5.5112   TTGATCAATAAAAAA               CACTA GAAA CAGTG                CTCTTGAGCAGGAAA  79 14
D9T12_RS08885 2016279 .. 2016289 -  -3.2  -2.53134   TTAAAGCAATAAATT                 GTCC AAT AGAC                 GAGTTTTTCCAAGAC  43 0
D9T12_RS08880 NONE
D9T12_RS08875 2014497 .. 2014514 -  -9.9  -5.02439   ATATAATCATAAAAA             GCCAATC AAAC GATTGGC              TTTTTGCTTTTTAAA 100 63
        thiI 2006463 .. 2006478 -  -6.2  -3.34517   AGTGTTTTTTAAACA              TTTACC GGCC GGTAAA               CTTTGATATTTTCAT  59 3
D9T12_RS08835 2003132 .. 2003166 -  -5.8  -3.36492   TTTTCAATTCCACAA     CGCGCGATTTCA GTGCGTGGGTT TGAAATCGCGAG     CCATTATAGCAAAGA  59 52
         rnr 2000585 .. 2000601 -  -5.8  -5.07011   CACAGAAACTAAAAA              CTCGGC ACAAG ACCGAG              TTTTGCGAGAGGCTA  80 72
        rlmB 1999627 .. 1999641 -  -5.6  -2.81642   ACACCAGTCAGTATA               CGCGTC GAT GATGCG               GGTGATATTTATCTA  52 197
         fnr 1996881 .. 1996907 - -10.9  -5.60993   TTTTGCATAAAAAAA         CCCGACCATAA AATTA TTAGGGTCGGG         CAAGCGGGCTACATT 100 228
         pal 1996197 .. 1996218 - -10.9  -4.88222   ACTAAAACGCAAAAA           GCCCCACAA TCGC TTGTGAGGC            TTTTTTTATTAAAAT 100 52
D9T12_RS08805 1993392 .. 1993404 -  -6.3  -4.18494   GACCTTTACCTAAAA                TCGAT GAA ATCGA                AATAACTGAGCACTA  69 38
D9T12_RS08800 1991883 .. 1991895 -  -3.4  -4.57516   ATAGTTAAATTAAAA                CGAT TATTT ATCG                CGATTCAACTGGCAA  64 20
D9T12_RS08795 NONE
D9T12_RS08790 1990140 .. 1990150 -  -5.4   -4.1891   TCTCCTCAATATAAA                 TCGT TTA ACGA                 CAACCTGAAACACGT  67 19
D9T12_RS08785 1989394 .. 1989406 -  -4.8  -2.72344   TTCCACTCCTAATCA                CGGT TTTCT ACCG                GCCGGTAAAGCTCAC  49 75
D9T12_RS08780 1989032 .. 1989058 -   -13  -5.95449   AAAGAAAATAAAAAA         CGCCATCACGCT TAA AGCAGGATGGCG         TTCTATCGCTTCCAA 100 60
D9T12_RS08750 1980883 .. 1980896 -  -3.8  -5.12707   TCAAATTTCAAAAAA               GCTC AGAGAA GAGC                TGGAATTACAACAAT  74 46
D9T12_RS08745 1979173 .. 1979185 -  -4.8  -3.79687   AGCTTTTAGAAAAGA                TGCC TATTC GGCA                GAGAAAAGAAAAACT  59 228
        flgB NONE
        flgC NONE
D9T12_RS08730 1977383 .. 1977401 -  -2.4  -3.68619   CTCAATGCATTTAAA             TCATAAGC TAC ACCCATGA             TATTTCTCCTTGTGT  49 106
D9T12_RS08725 1975680 .. 1975698 - -13.1  -5.00616   TGTTTTTTGAAAAAA             GCCGGCG ATCAA CGCCGGC             AAGACCAGAAAAAGT 100 47
D9T12_RS08720 NONE
        flgG NONE
D9T12_RS08710 1973131 .. 1973153 -  -7.1  -4.26881   TGCTAGAAAATTAAA          TGGGAGGATT CAAA AATCC-CCCA           TCTACATACGTTAAT  75 54
D9T12_RS08705 NONE
D9T12_RS08695 1964914 .. 1964948 -  -6.3  -2.78679   CTGTCTCATTCAAAG     TTGACCGGCCGGTAA GGTTT CTACCGGCCGGTGTT     TGTTATGCGTTGCTG  55 45
D9T12_RS08690 1963734 .. 1963750 - -12.3  -5.27477   ATCTTAATTAAAAAA              GGGAGCA ATT TGCTCCC              TTATTGGAAAACGAT 100 70
D9T12_RS08680 NONE
D9T12_RS08675 NONE
        flgK NONE
        flgL 1958250 .. 1958288 -  -6.2  -2.81316   TTAGTATGTAAGAAT  TTTGACTCATGCTCAGC CTCCAT ACTGAGCATTAG-CAAA   TAAAAGGCCAAACAA  55 41
D9T12_RS08660 1956643 .. 1956653 -  -2.6  -3.68302   CCAATATTTGAACAA                 TTTA GCA TAAA                 TACCAATGTTTCTAG  50 204
        pseB NONE
        pseC NONE
D9T12_RS08640 NONE
        pseF NONE
D9T12_RS08630 NONE
        pseG NONE
        pseI NONE
D9T12_RS08615 1946448 .. 1946473 - -14.9  -5.95286   ACGAAAAACAAAAAA         GCCGGTAAAAA CTAC TTTTTACCGGC          CGGTAGTAAACTTTG 100 55
D9T12_RS08610 NONE
D9T12_RS08605 1944129 .. 1944150 -  -6.6   -5.7946   TTCGGAATAAAAAAA           GCCGCATT TCATTC AATACGGC            TAACACAAGGGAATT  93 124
D9T12_RS08600 NONE
D9T12_RS08595 NONE
D9T12_RS08590 1942020 .. 1942036 -  -7.2  -5.95539   GCTTAAACAAAAAAA              GCGGCC ATAAA GACCGC              TAAACACACAAGGGA 100 46
D9T12_RS08585 NONE
        fliS NONE
D9T12_RS08575 1938772 .. 1938788 -  -3.8  -4.69464   AAAAGATTTTAAAAA              TTATTG AATAA CAATAA              GAAAAGGTTAAAACT  66 33
D9T12_RS08570 1937572 .. 1937585 -  -5.3  -3.20991   TTGAACTTAACTCAA               TTCGT ATTT ACGAA                TTTTTTCAACTAAAG  55 3
D9T12_RS08565 NONE
D9T12_RS08560 1934724 .. 1934734 -  -5.4  -2.89565   AATTTTAGAGAATGA                 CCAA ATC TTGG                 CATCATTTCCCAAGC  52 147
        fliE NONE
        fliF NONE
        fliG NONE
D9T12_RS08540 1930572 .. 1930589 -    -2  -2.76105   TACAGAAAGAAAACG             CCTATT AGAGAA AACAGG              TTTCGATTTGGATTT  41 56
        fliI NONE
        fliJ 1928661 .. 1928683 -  -2.1  -3.65351   TCACTCTTATCTAAA          TACTCGTTGT TATC ACAAC-AGCA           AATAGTATGCCCAGA  49 70
D9T12_RS08525 NONE
D9T12_RS08520 NONE
        motA NONE
        motB 1923431 .. 1923445 -  -2.8  -3.54459   TCAATTTGGGTTAAA               GACTAT TGT ATGGTC               TGAGTGGTTAGATTT  48 13
D9T12_RS08505 NONE
        fliM NONE
        fliN 1921152 .. 1921164 -  -7.7  -5.31519   ACACCCAAAGAAAAA                CCACA GGT TGTGG                TTTTAGAATATTCAA  95 166
        fliO 1920329 .. 1920357 -  -4.7  -3.53779   TTTTGAAAAGAGTAA        TGATTTAAAAAAC GTT GTTTTTTCAGTCA        CGGACGTCGTGTGTA  57 47
        fliP NONE
        fliQ 1919300 .. 1919311 -  -2.2  -3.16093   CCAAATTTAAAACTA                GCCT ATAT AAGC                 AGGAATATTCATAAT  43 11
        fliR NONE
        flhB 1917305 .. 1917318 -  -2.4  -4.07993   TAAATACGAAAAACA               GTTC ATTATA GAAC                ACTTAACCGCAATAA  53 73
        flhA NONE
        flhF NONE
D9T12_RS08455 NONE
D9T12_RS08450 NONE
D9T12_RS08445 NONE
D9T12_RS08440 1910881 .. 1910901 -  -9.7  -5.34381   AAACTCAAACAAAAA            CGCCGGT CATAAAT ACCGGCG            TTGAAACTGCGATAA 100 91
D9T12_RS08435 1908647 .. 1908657 -  -6.8  -3.65199   AACGTTTTAGTGAAA                 CGCT CAT AGCG                 TTACATTTGGAAACG  66 26
D9T12_RS08430 1908049 .. 1908080 - -11.1  -5.86976   GCACAAAATAAAAAA      CTTTGTCCAATAC AACTAG GTATTGAACAAAG       TTTGCATAATATCTC 100 57
D9T12_RS08400 NONE
D9T12_RS08395 1902770 .. 1902792 -  -4.9  -5.83211   TACCAAAATAAAAAA           GGCTCTT TAATAAAGT AAGAGCC           TTTTACAATAAGCCT  91 82
D9T12_RS08390 1901201 .. 1901228 - -10.6  -4.89567   CCTGAAAACAGAAAA        CCCGAGCCAAAC AGAC GTTCAACTCGGG         TTTGCTTATCGAAAA 100 47
D9T12_RS08380 1900164 .. 1900203 -  -2.9  -5.93252   GGTAAAAATAAAAAA  CCCCAGAAAAAACTA AACCCGAAGG CGGTGTTTTCTGGGG   TGTTCCAAAATTAGG  85 285
D9T12_RS08365 NONE
D9T12_RS08360 NONE
D9T12_RS08355 1892589 .. 1892599 -  -5.4   -2.5664   GACCCAATCAGCAAT                 CATG CGC CATG                 TTATTTTCGTCGTTT  51 26
        crcB 1892017 .. 1892032 -  -3.4  -4.36914   CCTTTTTCTATAAAA              TTAAAA TCGT TTTTAA               AATTTTTATTACTCA  62 65
D9T12_RS08345 1890635 .. 1890674 - -15.8  -3.21622   ACAGAGATTTATTAA  GACTCTACCGGCCGGTAA GAGT TTACCGGCCGGTAAAGAA   CTTGAAAGCGGAATA 100 54
D9T12_RS08340 1890170 .. 1890195 - -13.5  -5.76633   GTAGACATAAAAAAA         CCCAGAATTTT GCGG AAAATTCTGGG          TTTTTTACATTCCTT 100 189
D9T12_RS08315 NONE
D9T12_RS08310 1884086 .. 1884102 - -10.8  -5.83822   TACAGGCAAAAAAAA              GCCGCG ACAAG CGCGGC              AAAAGTCGAGATTTA 100 364
D9T12_RS08305 1882866 .. 1882884 - -13.2  -3.61894   AACCGTTCTTAATAA             CTGTCCAC AGT GTGGACAG             TTATTAACAGTATTT 100 85
D9T12_RS08300 NONE
D9T12_RS08295 NONE
D9T12_RS08290 1881549 .. 1881579 -  -9.8  -5.95539   CTGGAAACAAAAAAA       CCAAATTGGCTTCC CCA AAAAGCCGATTTGG       TTTTCATTTTCATAA 100 202
D9T12_RS08285 1880866 .. 1880884 - -11.8  -4.10429   AATTATTCTTGAAAA             CTGTAACC AGT GGTTACAG             TTGTTGCGAGTCTTT  91 20
D9T12_RS08280 1880430 .. 1880443 -  -3.9  -3.70902   TTTGCCATACTTAAA               TAAAC CCTT GTTTA                ATTATCATTTCCTGT  54 23
D9T12_RS08275 NONE
D9T12_RS08270 NONE
        topA 1877436 .. 1877474 -  -4.7  -5.95286   ATTAAAAATAAAAAA  GGGATATATCTCGC-CCC TTGG GGATAAAAGATATATCCC   AAGGGGCTAAAAAAA  91 151
D9T12_RS08260 1876838 .. 1876858 - -13.3  -4.10953   ATTTATGAAATGAAA            GCGGCGGTA AAA TACCGCCAC            AAATATTAAGCTACA 100 31
D9T12_RS08255 1875826 .. 1875862 -  -4.6   -5.7946   TCCTTAATAAAAAAA   TAGAGAGATACATCCCCC ATT GGGAGAT-CA-CTCCCTA   ATGGGTAAAAATACA  91 46
D9T12_RS08250 1875316 .. 1875349 - -15.5  -5.42198   CCTTAAAAAAGAAAA     GGGATATTCCTTCCC AGCA GGAAAAGAATATCCC      ACTGGAAAAAAAGTT 100 50
D9T12_RS08245 1874732 .. 1874761 -  -3.7  -3.89695   CTTGTACAAACATAA       CGTATCTCCCAA AAATGAA TTAGG-GATACG       TCGCAGCCCACACGG  56 91
D9T12_RS08240 1874408 .. 1874461 - -15.5  -2.82623   CCTCCTTTATAATCA TCTTCGAGACTTTTCTCAGGTTTCT ATAA AGAACACTGAGAAAAGCCCCGAAGG GCAGAGAGGTTGTTA 100 54
D9T12_RS08235 1872502 .. 1872550 - -14.2  -3.21465   AAGTTAAAGGTAAGA GAGATTGAACACCGATAGACTTT ATTT AAAGCCCATTGGTGTTCAATC-C ATAGTAGGACTGAAC 100 475
D9T12_RS08230 NONE
D9T12_RS08225 NONE
D9T12_RS08220 NONE
D9T12_RS08215 NONE
D9T12_RS08210 NONE
D9T12_RS08205 NONE
D9T12_RS08200 NONE
D9T12_RS08195 NONE
D9T12_RS08190 NONE
D9T12_RS08185 NONE
D9T12_RS08180 1861456 .. 1861485 -  -7.1  -5.00884   ATGGTCTCCAAAAAA       TTTCGCTGAGCCG TAAA CGGCTCAGAAAGA        ATCAAATACTCAAAT  85 43
D9T12_RS08175 1861061 .. 1861073 -  -9.1  -2.54851   TAATAAATATAAATC                CGGCT TCA AGCCG                TTCCACCTATTGGCG  68 18
D9T12_RS08170 NONE
D9T12_RS08165 1858716 .. 1858745 - -10.1  -5.84381   TTATCAATAAAAAAA       GGTGCTTAACCCA CTAT CGAATTAAGCACC        TTTTACGTTTTAAAA 100 53
D9T12_RS08160 NONE
D9T12_RS08155 NONE
D9T12_RS08150 NONE
D9T12_RS08145 NONE
D9T12_RS08140 1853584 .. 1853596 -  -2.7   -3.5861   ACGCACAACAACTAA                TCCAT TGT ATGAA                CTTCTAAATTTGAAC  48 9
D9T12_RS08135 NONE
D9T12_RS08130 NONE
        traD 1850591 .. 1850607 -  -5.1  -3.14211   AGTCTCTGCCATTAA              GCTGCCA CCT TAGCAAC              ACTCAGCCAATCATT  53 5
D9T12_RS08120 1849935 .. 1849948 -  -2.5  -3.07845   AAGAACAATTAGAGA               TATTT TTTG AAATA                TTTTGCAACAACCCA  43 5
D9T12_RS08115 1849379 .. 1849390 -  -2.2  -2.72463   ATTCACCTCTAACGA                CGAT AATC ACCG                 GAAACCGGCTCAAAC  40 7
D9T12_RS08110 1849134 .. 1849146 -  -7.7  -3.53767   AAGATTTAATTAGAA                TAGCC AGC GGCTA                TTAAAAATGCCGCCA  69 3
D9T12_RS08105 NONE
D9T12_RS08100 NONE
D9T12_RS08095 NONE
D9T12_RS08090 1846790 .. 1846802 -  -3.4  -3.09516   CCTTTCATTACTGAA                TACC TCCTT GGTA                TTCATAAAAAAATTC  45 5
D9T12_RS08085 NONE
D9T12_RS08080 NONE
D9T12_RS08075 NONE
D9T12_RS08070 NONE
D9T12_RS08065 1840315 .. 1840329 -  -3.4  -3.54181   ATCTGAAAACATCAA               CGCCCC TCC GTGACG               CTTTGAGTTTCTTCA  50 7
D9T12_RS08060 1838172 .. 1838204 - -17.2  -5.91981   AAAATTTAAAAAAAA     GGGATAGAGCG-TCC GCTA GGATCGCTCTATCCC      TTGGTCGGAAACAGT 100 441
D9T12_RS08050 NONE
D9T12_RS08045 1836803 .. 1836836 - -11.8  -2.92449   TAAATATGGGATACA     CCGACCCTATGGGA ATGGCA TCCCATAGGGTTGA      TAAAAATGACTTCAA  82 259
D9T12_RS08040 1835786 .. 1835801 - -10.4  -5.76237   TATATAAACAAAAAA              CTCGGC ATAT GCCGAG               TTAAATTTAAGATAG 100 32
D9T12_RS08035 1834674 .. 1834686 -  -2.7  -3.18032   TAACAATAGGTAATA                TCCAA ATA TTAGA                CAGCGAAAACTCAAC  45 179
D9T12_RS08030 NONE
D9T12_RS08025 1833486 .. 1833512 - -15.3  -3.74462   AACGAGAACACAGAA         CCCAATGGGAA ATGTA TTCCCATTGGG         TTAAGGACATCCTAG 100 265
D9T12_RS08020 1833108 .. 1833125 - -11.3  -5.79595   GGCCAAAACAAAAAA             CCCGATC AAAT GATCGGG              ACAAGAGGGTATTAG 100 151
D9T12_RS08010 1831964 .. 1832015 - -16.2  -2.93878   GAAGATCTAAGCAGA TCAAACAAATCGGTATATCTACTT TTTA AAGTTGTTATACCGATTTGTTTGG GATCCAACCAGCGCA 100 58
D9T12_RS08005 NONE
D9T12_RS08000 1830797 .. 1830813 - -10.8  -5.55769   GGCCACAATAAAAAA              CCCGGC TAATT GCCGGG              TGTGGATTTAATCTT 100 51
D9T12_RS07995 NONE
D9T12_RS07990 NONE
D9T12_RS07985 1827844 .. 1827871 - -14.3  -3.15663   AGTCATTTTTATCAA        CCCTATGGGAT ATATCA ATCCCATAGGG         TAACGGTGTATCTCA 100 424
D9T12_RS07925 NONE
D9T12_RS07920 NONE
D9T12_RS07910 1816082 .. 1816097 - -10.4  -5.65177   ACAGGCATAAAAAAA              CCCGCA TGAA TGCGGG               TTAATATCGAATATG 100 39
D9T12_RS07905 NONE
D9T12_RS07895 1813451 .. 1813462 -    -3  -2.76225   AATTAACGCCAACTA                TAAG CCGC CTTA                 TTTTCTCTGGCATCG  43 445
D9T12_RS07885 NONE
D9T12_RS07880 NONE
D9T12_RS07875 NONE
D9T12_RS07870 NONE
D9T12_RS07865 1810302 .. 1810315 -  -4.5  -3.39216   GGCTGATTCAAAAAT               TACCC ATTG GGGCA                TAGGTCTAGCGATTG  53 78
D9T12_RS07860 NONE
D9T12_RS07855 NONE
D9T12_RS07850 NONE
D9T12_RS07845 NONE
D9T12_RS07840 NONE
D9T12_RS07835 1805499 .. 1805517 - -10.2  -5.25803   AATGCGGATAAAAAA             GCCCCGTT TGA ATCGGGGC             TTGAATGGTTAAATG 100 79
D9T12_RS07830 1803804 .. 1803815 -  -4.4  -3.68962   TGTTAATAGACATAA                CCAT TCAA ATGG                 ATAAAGATACTTAAC  57 79
D9T12_RS07825 1802459 .. 1802473 -  -2.8  -2.85069   AACGTTTAAACAGTA               GGTG AACGCAG CACC               ATGTTATAAGTTGGG  42 29
D9T12_RS07820 1800919 .. 1800937 -  -8.9  -2.55657   CATAAAATTCAACAT             CCATACC GTGAA GGTATGG             TTTCCTTTTATATAG  68 171
D9T12_RS07800 1796225 .. 1796252 -   -12  -6.20267   CCAAAAACAAAAAAA        CGCCCACAACCA TAAT CGGTTGCAGGCG         TTTTTTTCATCAAGT 100 53
D9T12_RS07785 NONE
D9T12_RS07780 1789712 .. 1789730 -  -5.2   -3.0274   CAAAATCAAGAATTA             GACTCTCG GAG CATGAGTC             ATTAAAAATTGCATC  52 4
D9T12_RS07770 1788126 .. 1788144 -  -3.2  -4.08767   GTCAGTCTCCTAAAA             TCAAAATA CTA TTTTTTGA             GTGCTTGCAAAGCGG  57 15
D9T12_RS07765 NONE
        plsX NONE
D9T12_RS07755 NONE
        fabD 1784668 .. 1784678 -  -2.6  -3.64205   TTACAAAAATATGAA                 TTTA TTC TAAA                 GAGTCACCATCGCTT  48 21
        fabG 1783837 .. 1783849 -  -4.9   -3.6716   CAATTGAACAAAAAC                CTTTT GCA AAAAG                TGTTTTGGCTTTTAA  59 37
D9T12_RS07740 1783433 .. 1783447 -  -7.1  -6.30182   CTAGACAAAAAAAAA               GCCGT ATAAA ACGGC               TTTTCAATCTCAAGA 100 54
        fabF NONE
D9T12_RS07730 1780562 .. 1780586 -  -3.5  -2.81471   CAGAACTTCACCAGA          CATTAAGCGTC ACT GTCTCCTAATG          CACGTAGCAATCCAC  44 3
        pabC NONE
        mltG 1778520 .. 1778531 -    -3  -3.25169   TGAACAATTTAGCAA                TTCA TTAG TGAA                 GTTAAGACTTACAAA  45 41
D9T12_RS07715 1777725 .. 1777750 -  -3.9   -4.7254   AGGTGCTAGCAAAAA         TTCGCAAGCCA CGAG TGGCTAACGCA          AAACCTTCAAGTAAG  69 102
D9T12_RS07710 NONE
D9T12_RS07705 NONE
D9T12_RS07700 1773831 .. 1773842 -    -3  -3.08464   CCATTATCGATTTAA                GATA TTTT TATC                 GATATAAGGTGTGAT  43 21
D9T12_RS07695 NONE
D9T12_RS07690 1772624 .. 1772643 -  -9.4  -3.16323   AAAATTTGTCATTAA            TTTTGACC GGCC GGTCAAAA             TTAATATTTAAACCC  75 52
D9T12_RS07685 NONE
D9T12_RS07680 1772333 .. 1772344 -  -4.4   -2.8806   AAATTTTGTGACACA                CCAT TTAA ATGG                 CACGCCCAGTAGGAT  48 23
D9T12_RS07675 1772206 .. 1772224 -  -8.9   -5.4505   GGTTCTAATAAAAAA             GCCTTGA GAGAA TCAAGGC             CTTAGAATATGGGGC 100 35
D9T12_RS07670 NONE
D9T12_RS07665 1769814 .. 1769824 -  -2.6  -3.50447   GTAATGTTTACACAA                 TAAA GAA TTTA                 TATGCTCTGAGCAGT  48 60
D9T12_RS07660 NONE
D9T12_RS07655 NONE
D9T12_RS07650 1764335 .. 1764356 - -10.9  -2.94912   GTTGCAATGGATATA           GAAGCGCTG ATTT CAGCACTTC            TCTAGGAATGGCTTA  79 61
D9T12_RS07645 NONE
D9T12_RS07640 NONE
D9T12_RS07635 1761776 .. 1761791 -  -6.2  -4.64657   GTAAATCCCGAAAAA              TAGCAA GGGA TTGCTA               AAGGTGTAAAAACCA  76 72
D9T12_RS07630 NONE
D9T12_RS07625 NONE
D9T12_RS07620 1758990 .. 1759013 - -12.6  -3.92602   GTAAGACGTTACAAA          CTGCCAATTT AAAG AAATTGGCAG           TTTTAAGCTGTTTTA  95 54
D9T12_RS07610 1757399 .. 1757430 -    -6  -2.95102   AGTTCATCGATAAAG     GCTCTGCTCAGGCC GTCAGA GGCCTGAG-A-AGC      TTTTTTAAGAGCTTC  56 77
        arsJ NONE
D9T12_RS07590 1751047 .. 1751063 -  -3.7  -5.04987   AACACTTTCAAAAAA              CTGCAGT CGT ACTACAA              CCCTTTTATTTCGGT  72 164
D9T12_RS07565 NONE
         glk 1742810 .. 1742825 -  -7.6  -2.84671   CAAATATGGAATAAT              CCATTG ATTA CAATGG               GAAAAAAACAGTTCA  61 404
D9T12_RS07525 1735235 .. 1735259 - -10.1  -2.72379   GCAATCGGTTAATGA          CCGATCAAAAA TAA TTTCTGACCGG          CCGGTCATATCAGGC  74 52
D9T12_RS07495 1726690 .. 1726708 -  -6.6  -4.56775   ATTGGCTTCGAAAAA             TGGCGTAG AAA CCTCGCCA             TAGCGCTTGGAAATA  76 353
        tsaE 1724954 .. 1724966 -  -3.4  -3.09193   ATGATATTTATCCAA                CCTT TGCTC AAGG                ATTTCAATCGTTGCA  45 197
D9T12_RS07480 1723385 .. 1723430 - -14.3  -3.53761   TAACCGGCCGGTAAA TTAAGGAGCCTCCGATTAAAT TCTG ATTGAATCAGAGGTTCCTTAA TCAACTACTCCGGCG 100 52
D9T12_RS07465 NONE
D9T12_RS07460 NONE
D9T12_RS07455 NONE
D9T12_RS07450 1717189 .. 1717208 -  -2.1  -3.95449   GCAGAAGATACCAAA            GCTAAAC GAATTT GCCTAGC             CAGTAAAACCTAACT  51 108
D9T12_RS07445 1715824 .. 1715839 -  -2.6  -3.75517   ACTGTATAAAATTAA              GAATAA ATAC TTACTC               TCGAACCCTACTGAA  50 103
D9T12_RS07440 1714728 .. 1714748 - -14.1  -5.79595   TCTTAAAACAAAAAA            GCCGAATCA TTA TGATTCGGC            TTTTTTGTGAAACAA 100 50
D9T12_RS07425 NONE
        bamC 1710324 .. 1710339 -    -9  -5.49579   TCAGAAAAAACAAAA              CCCTCA GAAT TGAGGG               TTGTTGATGGTTTGG 100 42
D9T12_RS07415 1706154 .. 1706185 -  -8.8  -2.87003   AGTACTAAAAAGGGA      GAGTGTGGTCAATA ACAA TACTATCCACACTC       AGTTCAATTTAAAGT  69 158
D9T12_RS07410 1703864 .. 1703888 - -15.1  -5.95286   ATTAAAAACAAAAAA          CCCAGCACAGT CAA ACTGTACTGGG          TTTTTATTGTGTTAA 100 55
D9T12_RS07405 1703464 .. 1703476 -  -4.1  -3.10164   GTATTGAGGATTTAA                TGCAC ATG ATGCA                ATAAACCCTATCCAC  47 57
D9T12_RS07390 NONE
D9T12_RS07385 1699518 .. 1699534 -  -2.2  -4.69053   CATCAGGCAACAAAA              TCCAGC CAATT GATGGA              AGAAATTAATGCATC  63 388
D9T12_RS07365 1692854 .. 1692877 - -11.1  -5.59502   GAAAAAACGAAAAAA          CCACTCAGA AACAAA TCTGAGTGG           TTTAGTTTAACGAAC 100 71
        nrdR NONE
        ribD NONE
D9T12_RS07350 NONE
        ribB 1689182 .. 1689202 -  -2.5  -2.57672   GATATTAAAAACTAC            GAGCATTTT GCC ATAAAGCTC            ACTCAAAGAGAATTT  41 108
D9T12_RS07340 NONE
        nusB 1688139 .. 1688150 -  -7.2  -5.64274   TGAGGCATAAAAAAA                GGCC TTAC GGCC                 TTTATTAAGCACTTA 100 49
        thiL 1686912 .. 1686924 -  -7.7   -3.6003   TAAATTACGGTCAAA                GCATC ACC GATGC                ATGTCTAGGCTGGGA  70 143
D9T12_RS07320 1685362 .. 1685384 -  -5.5  -6.08342   CAACAAACAAAAAAA          CCGGCAAGGT TTTC ACCA-GCCGG           TTTTCTTTAATATTC  95 63
D9T12_RS07315 1683801 .. 1683811 -  -5.4  -4.13767   TTGGCGATTTTAAAA                 TGCT AGC AGCA                 CTCGGCGCTTGGTTT  65 276
D9T12_RS07295 1680676 .. 1680698 -  -2.1  -3.34088   AGCATTATAGAGGAA           TTCGCTTTT TAAAT AAAAACAAA           CCGACCTTTAAAAGC  45 132
D9T12_RS07290 NONE
        aspS NONE
        nadA NONE
        ruvC 1676482 .. 1676492 -  -3.2   -4.1721   AGTTATACCTTAAAA                 CGTC AAA AACG                 AATATTTTAAAACTT  57 32
        ruvA NONE
        ruvB NONE
        tolQ NONE
D9T12_RS07255 NONE
        tolA NONE
        tolB 1670951 .. 1670962 -  -3.6   -4.0098   TGTTAATCTAAATAA                GGCC CCCA AGCC                 GGCTCACGAACTTCT  58 1
D9T12_RS07240 NONE
        ybgF NONE
        queC 1668517 .. 1668527 -  -5.4  -3.35996   GAGTGTGATTCATAA                 GCTT TGC AAGC                 ATCACTGAATCTAAA  57 48
D9T12_RS07225 NONE
D9T12_RS07220 1668074 .. 1668099 - -16.3  -5.60689   TTAGACAATAAAAAA         CCCCGTTAAGA TTTC TCTTAACGGGG          TTTAAATATATGGTG 100 36
D9T12_RS07210 NONE
D9T12_RS07205 NONE
        ntrC NONE
D9T12_RS07195 1662921 .. 1662932 -  -7.2  -2.90813   GAGTGCTTTAAATTA                CGCC TTAG GGCG                 ATACTTCCTGCACTT  61 352
D9T12_RS07175 1659994 .. 1660019 - -11.9  -5.96894   ACGCAAACAAAAAAA         GCGCTGGAGAT TTAC ATCTTCAGCGC          TTTTTTATTTCCCAG 100 87
D9T12_RS07170 NONE
D9T12_RS07165 1659185 .. 1659210 -  -6.8  -5.72622   TCCAGAAACAAAAAA         GGCGCTGAAG TTTTCT CTCCAGTGCC          TTATTGATAACGATT  93 201
D9T12_RS07155 NONE
D9T12_RS07150 NONE
D9T12_RS07145 NONE
D9T12_RS07140 1655079 .. 1655096 -  -6.9  -3.57797   TCTAAAGGCATATAA             CGCCCGG CTAA CCGAGCA              AATTTTGTTGGCGGC  67 93
D9T12_RS07135 1654696 .. 1654706 -  -4.6  -3.22215   GCAACCATAAAACCA                 CAGG CTG CCCG                 ATTTACATAACGCCT  51 133
D9T12_RS07130 1653405 .. 1653430 -  -9.1  -3.56972   AGTTTACTAAAGCAA         CAAACAGATCA GGAT TGTTCTGTTTG          ATGGTTATGTCTTTC  75 484
D9T12_RS07120 1652261 .. 1652293 -  -4.1  -2.90194   ATTTTTTGAATCACA      GGGTGGCCATAAC TAGCTCG GTTACGGGCACGC      AAATTTTAATTTTCC  46 101
D9T12_RS07115 1651394 .. 1651411 -  -3.3  -3.85698   CGGGGTGGTGATAAA             CTGCGTG GTTT CGCGCAA              AGAAATTTTTAATTT  55 274
D9T12_RS07110 1650738 .. 1650751 -  -2.3  -3.30159   TTAACTCTGCCATAA               CAGGG TGTG CCTTG                TTTTTGAAGCCTAAC  45 225
D9T12_RS07105 1650131 .. 1650147 -  -7.9  -2.93219   AACACCTGTATAAAC              GGCGTCC GGT GGAGGCC              CATCGGGCCGGAACG  64 56
D9T12_RS07100 1649413 .. 1649430 -  -4.1   -4.4634   AATAAAAAACAACAA             GGTACTT ATTC AAGTTCC              TATCCTTATGAAGTT  63 90
D9T12_RS07095 1648674 .. 1648701 -  -4.9   -4.2123   CAGGCAGCTAACAAA        CACCATATTCC ACTCAA GGAATCTAGTG         CGACAGGGAAGATAC  65 134
D9T12_RS07090 1647772 .. 1647786 -  -4.3  -2.82666   TCAAACTAAAATCCA               TACTG AGTAA CAGTA               CATTTCTACATGGGA  48 72
D9T12_RS07085 NONE
D9T12_RS07080 NONE
D9T12_RS07075 1645318 .. 1645334 -    -8  -6.11644   TTAGCTAAAAAAAAA              GCGCTT GGAAT AAGCGC              TTTTTTAAATTCATG 100 48
D9T12_RS07070 1643940 .. 1643960 - -11.9  -4.12296   CCTAGAAGCAAAGAA            GCCGGTTCA AAA TAAACCGGC            CGGTAATGTTTTAAC  93 75
D9T12_RS07050 1640054 .. 1640073 -  -7.1  -6.10295   TTAAGACAAAAAAAA            CCCCAGC ACTTCG GCTAGGG             TTCAAATCATTATCT 100 367
D9T12_RS07030 NONE
D9T12_RS07025 1633356 .. 1633370 -  -2.9  -3.79649   TACACCAGAAAAAAC               TTGAA GAGAT TTCAA               AGAAAAGTGGTAAAG  52 95
D9T12_RS07015 1632113 .. 1632142 - -17.3  -4.84527   TTTACAGAGCAAAAA       GCCCAAGTTTACC GGCC GGTAAACCTGGGC        TTTTTTATGGTTTTC 100 95
        hrpA 1626991 .. 1627001 -  -6.8  -2.52795   AACTCGTTTAATTTA                 TGGC AAA GCCA                 GTTATTCAGAGTCGA  57 196
D9T12_RS07000 NONE
D9T12_RS06995 NONE
D9T12_RS06990 1625393 .. 1625403 -  -2.6  -3.43151   TGAATCACTAATCAA                 TTAT TAA ATAA                 TGAAATTTGGGAACT  46 96
D9T12_RS06985 1624803 .. 1624816 -  -3.9  -2.57132   TTGTGTGTTTAGAAG               CTTAA ATAA TTAAG                TTTTACCAAAAAAGG  45 21
D9T12_RS06980 NONE
D9T12_RS06975 1623291 .. 1623325 -  -3.7  -4.04206   CTACCCGGATACAAA     CTTTGCGTTCTTC GATGAAAAA AAAGAACCCAAAG     AAACCGTCAAAGGAA  58 220
D9T12_RS06965 NONE
        sucD 1620847 .. 1620864 -  -5.5  -3.66666   TTTAAAAGCTTTAAA             GCCCAAG ATTT CCTGAGC              AAAGCAGCGCATGGA  60 92
D9T12_RS06955 1619076 .. 1619101 - -14.9  -5.46657   TATCTTAATAAAAAA         GGATTGTAACC GGCC GGTTACAATCC          TTTTTTTGTTTTTAT 100 65
        rluD 1616947 .. 1616962 -  -3.2  -2.77005   AAGCAACTCTTAAAC              GCTACC GGCC GGTATC               TTTGGTTGAGGTCTA  44 38
        pgeF 1616025 .. 1616043 -  -5.2   -3.9951   AAATATCTAAAAACA             GGTGGTCT TTA AACCCACC             AAGCTGAATTTTCTA  61 38
        ampD 1612165 .. 1612179 -  -6.4   -4.2558   CACCTGGGATCAAAA               CAACCC AAA AGGTTG               TCGCGCATTCGGCTT  72 244
D9T12_RS06915 1611249 .. 1611276 - -17.8  -5.95286   ACTAAAAACAAAAAA        GCCAGAGCCGAC AAAC GTCGACTCTGGC         TTATTGTCAATTCAG 100 57
D9T12_RS06910 1609915 .. 1609936 -  -5.1  -5.08824   CCTTCATTCAAAAAA           TACCGTCCA TTTT TGGGCAGTA            ATGACTTTAAAGCAT  79 56
        ectB NONE
D9T12_RS06900 NONE
D9T12_RS06895 1605891 .. 1605912 -  -9.4  -2.89323   AAAACTGGTGACATA           CGGCCAAC AACAAG GCTGGCCG            TGTATTTCACTTAGA  73 67
D9T12_RS06885 1604457 .. 1604472 - -10.4  -4.86133   CATACACAGTAAAAA              CCCCAC TTCA GTGGGG               TTTATGAAATCATTT 100 64
        aceE 1601401 .. 1601424 -  -8.1   -5.1861   CTTAGCATGAAAAAA          GCCGCTCAC GAACAT GCGAGCGAC           TTCGTTTTAAGCATA 100 32
        aceF NONE
        lpdA 1597898 .. 1597913 -  -6.1  -5.30155   TTATGAATTAAAAAA              CCAGC ACTGAG GCTGG               TTTCTTCAAATATCA  89 295
D9T12_RS06865 1597008 .. 1597018 -  -2.6  -2.78683   ACAATAAATAAAACT                 TTAA TTT TTAA                 TCACTAAATTCATTC  42 22
D9T12_RS06860 1596661 .. 1596674 -  -8.1  -5.88197   CTAAATACAAAAAAA               CCTGC AACT GCAGG                CTTAAAAAATTATTG 100 60
D9T12_RS06850 1594492 .. 1594504 -  -4.9  -3.12884   AAATACTACTTAACA                CATTA AAT TAATG                TAATTATTTCAGTAA  53 48
D9T12_RS06845 NONE
D9T12_RS06840 1593598 .. 1593623 -  -7.7  -2.68952   CTCAAACAGAAGTGA         CAATCGTTTCA GATT TGAAACCATTG          CAAACTCTATTCATT  63 40
D9T12_RS06830 1589939 .. 1589960 -  -3.6    -4.183   CTAACGTCTAACAAA           CCTCGAGC GCTTTT GCGCGAGA            TCTTCTTCCCCGATA  61 208
D9T12_RS06825 NONE
D9T12_RS06820 1588524 .. 1588535 -  -5.8  -3.53012   TGGCTTTTCGCCAAA                CTCC AAGC GGAG                 ATTCTAGCCCACTAA  61 78
D9T12_RS06815 1585709 .. 1585728 -  -6.4  -4.30995   TTGCCTATAAAACAA            CCCGTATT TATC AATGCGGG             TTCTCACATTTAAAT  73 117
D9T12_RS06805 1582597 .. 1582627 - -11.9  -3.75105   GTAAGTGATCAATAA       TGACTGCCAACCC AAAGA GAGTAGGCAGTCA       AATTGTCCTATTATT  93 36
D9T12_RS06770 NONE
D9T12_RS06765 NONE
        nfsB 1573625 .. 1573636 -    -3  -4.64676   TTATTTGTAAGAAAA                TAAC TATC GTTA                 TGCCATCGGTATTGC  62 69
D9T12_RS06755 NONE
D9T12_RS06750 NONE
D9T12_RS06745 1571909 .. 1571923 -  -7.1  -5.90231   ACAAAGACAAAAAAA               CCTGC ACTAG GCAGG               TTTTTGATATTTTAC 100 60
D9T12_RS06740 1570180 .. 1570199 -  -2.8  -4.62471   GGCAATGGCGAAAAA            CCTGCTGA AGAC TCAACAGT             TCAAGTTCACTATCA  64 415
D9T12_RS06730 1568138 .. 1568152 -  -2.8  -4.50661   AACTTAGAATTAAAA               TAAGGT TTA ACCTTC               GTACAGCCTCAGAAA  60 47
D9T12_RS06725 NONE
D9T12_RS06720 1565461 .. 1565472 -    -3    -3.737   TAACTGGCGACTAAA                TGAT TTCT ATCA                 GCTTTACAAAAAACT  50 50
        modA 1564521 .. 1564538 -  -5.7   -2.7976   TTTAACACCTTAAAT             TTTAAAC CAAA GTTTAAA              CGTTACCGGCCGGTA  52 44
D9T12_RS06710 NONE
D9T12_RS06705 NONE
D9T12_RS06700 1561185 .. 1561204 -    -3  -3.27901   CCTATCAAAAACAAT            CGATAA-AT CAA ATCTTATCG            TTCTGCACACTGATA  45 20
D9T12_RS06695 1560910 .. 1560938 -  -8.2  -3.29649   ACCCTATTAGATCAA       CACGGCAGGATGT TTTA ACA-CCTGCCCTG        TTGTCTATCTAGAAA  70 42
D9T12_RS06675 1557816 .. 1557833 - -11.3  -5.59879   TATAAACACAAAAAA             GCCCAGT TTAA ACTGGGC              TCTCAAACAAATTAC 100 62
D9T12_RS06670 1557366 .. 1557397 -  -9.4  -2.65298   TTGACTCACCAGAAC      TTACCGTCCGGAAA CTCT TCACCGGCCGGTAA       ATTTCAATTTTATAT  72 35
        rpsB 1552297 .. 1552326 - -13.7  -2.97392   GAGATTAAAACAGGA       TACCGACCGATAA AACA TTACCGGCCGGTA        AAAATGATTATTCAG 100 33
D9T12_RS06645 1551330 .. 1551353 -  -8.2  -5.71983   TTAATTATAAAAAAA          CCACAGCAAC CGAA ATTGCTATGG           TTTTCAAAGAGCGAA 100 41
D9T12_RS06640 NONE
D9T12_RS06635 1549895 .. 1549929 -  -4.4  -3.05384   TTGGCTTTGACTCAA     GTACAAATTATCACCT ATT ACGTAATAAATTGCAC     CAGAGTTTAGAGAAA  50 47
D9T12_RS06630 NONE
D9T12_RS06625 NONE
        rseP NONE
        bamA NONE
D9T12_RS06610 NONE
        lpxD 1542700 .. 1542710 -  -2.6  -2.70788   TTATTTACAAAAAGC                 TTTT GAA AAAA                 CTTTTAGATTTATGA  41 35
        fabZ NONE
D9T12_RS06595 1541393 .. 1541416 - -12.6  -4.11183   TCGTATTAGAAACAA          TAAAAGCCTC TTTA GAGGCTTTTA           GCAATGACTTTGAAT  95 59
        lpxB NONE
D9T12_RS06585 NONE
D9T12_RS06580 1538276 .. 1538294 - -10.3  -5.24531   ATGGTTTACAAAAAA             GCCTGTC TAACT GACAGGC             TTTAAAGAATGTTCA 100 68
D9T12_RS06565 1533666 .. 1533677 -    -3   -3.9344   AAGGTTAATATTAAA                GATA TTCG TATC                 GACTGAAATATTCTA  52 9
D9T12_RS06560 NONE
D9T12_RS06555 1532258 .. 1532285 -  -6.4  -5.25803   AAGGCCGATAAAAAA        CCGCACAAGATTA GAA CAATCT-ATGCGG        TTTTTTTATTTCTAG  91 46
D9T12_RS06545 1531053 .. 1531071 -  -8.1  -5.36441   GTTGCAGACAAAAAA             GCGCCTC TGATC AAGGCGC             TTTTTTTATGTCTGA 100 139
D9T12_RS06535 NONE
        tsaB 1527694 .. 1527719 -  -2.7  -2.89743   AACGGAGAGATGACA         GCTTATTCACAA ATT TTGTGGATAA-C         TTTGTGTGTAAACAT  42 159
D9T12_RS06525 1526936 .. 1526948 -  -4.1  -4.61873   TTTCATAAACTAAAA                GTCCT TAG AGAAC                CTCTGATCGAATAAG  66 120
D9T12_RS06520 1525961 .. 1525990 -    -3  -5.65177   ACAGCTATAAAAAAA       GCCATAGTGTC GTTTCAATT GA-ACTATGGC       TTTTTAACGAAATCT  81 74
D9T12_RS06510 1523299 .. 1523317 -  -3.8  -3.72576   GGGTTGGTTATCAAA             CCATCGAT TTC ACTGATGG             TACAAATGATGATCA  53 373
        accA 1521586 .. 1521617 -  -4.4  -5.02502   TAGATTACAGAAAAA      GCTTACCGGCCG GTAGAATT CGACCGCTAAAC       TTATAAGATTTATTC  74 35
        tilS 1520056 .. 1520068 -  -4.1  -3.09491   CAGAGATTTATTTAA                GCTTC AGG AAAGC                AGAATTGGGTCTGCC  47 9
D9T12_RS06490 NONE
D9T12_RS06485 1517377 .. 1517404 -  -9.2  -5.38951   AATTTACATAAAAAA        GCCCCAGAACAA ACGC TTGTTATGGAGC         TTTTAAGGCTTTAGC 100 36
D9T12_RS06480 1515975 .. 1515989 -  -7.2  -3.40788   ATTTAACTCAATTAA               CTTGTT TAA AACAAG               ACTATTTAAGTTTTA  65 41
D9T12_RS06475 1515127 .. 1515140 -  -4.5  -4.68994   ACTAGCACCTAAAAA               CCTCG AATT CAAGG                AGTTAGATAGCTCAC  71 443
        surE NONE
D9T12_RS06460 1513279 .. 1513302 -  -2.4  -3.44936   AGAAAGGAATATGAA          GAATTTAACC GGCC GGTTGGATTC           CACTAAGCATCGGAA  45 6
D9T12_RS06455 NONE
D9T12_RS06450 1511781 .. 1511801 -    -7  -3.14132   TTGTGCTTGCATTAA            TTTTCGAT GAAAA ATCGAAAA            CTCAGTAAAACTGAT  63 50
D9T12_RS06440 1509915 .. 1509929 -  -4.3  -3.17763   TGTATATTTGATTAA               GAGAT TCGTT ATCTC               CGGCTTCCTCTAAAG  51 61
D9T12_RS06435 1508519 .. 1508533 -  -8.5  -5.63645   TTAAAAGACAAAAAA               CCGGC ATTAA GCCGG               TTTAAACGGAATCAA 100 49
D9T12_RS06430 NONE
D9T12_RS06425 1505810 .. 1505837 -  -9.2  -5.37593   CCTGAAACGAAAAAA        GCACGCCATTTA TTTA TTAATGACGTGC         TTTTTACTTAAAAAC 100 51
D9T12_RS06415 1502830 .. 1502846 - -10.9  -3.03771   TTATATTTGGGAAGA              TGATGCG ATG CGCATCA              CAATTGATCGTCAGG  79 436
D9T12_RS06390 1498830 .. 1498853 -  -6.8  -4.56597   TCTCTCGCTCAAAAA          GGGAAAA-CGT CAA ACGCTCTTCCC          TTTTTTCATCAATGA  78 77
D9T12_RS06375 1495561 .. 1495595 -  -9.5  -2.69977   ATATTTTAGATATCA    CAG-GAGTATGAAATG TTTA CAATTCATACTCACTG     AAGAATTAGGTTTAT  72 72
        ligA NONE
D9T12_RS06365 1492725 .. 1492735 -  -5.4  -5.00642   CAAGGTATACAAAAA                 CCTT GAG AAGG                 GAATTTTTGAATCGA  78 112
D9T12_RS06340 NONE
D9T12_RS06335 NONE
D9T12_RS06330 NONE
D9T12_RS06325 NONE
D9T12_RS06320 1486669 .. 1486686 -  -7.7  -4.35926   ACTGGAAATGGAAAA             CCTCCCT AAGC AGAGAGG              ATTCTGGGGCAAAAG  79 198
D9T12_RS06295 1481030 .. 1481041 -    -3  -2.55253   ATCAATCTTAACTTA                TTGA TTTT TCAA                 AATTGACTGGCATTT  41 70
D9T12_RS06290 NONE
D9T12_RS06285 NONE
D9T12_RS06280 1480572 .. 1480589 -  -4.1  -5.16472   AAAAATTCTAAAAAA             GCTCTCA AATA TGAGATC              AATTTTTAAATGCTT  74 100
D9T12_RS06275 NONE
D9T12_RS06270 1480174 .. 1480186 -  -2.7  -5.03145   CAATCTTGGAAAAAA                TTCCT ATC AGAAA                TCTTTAAAAAAGCAT  68 133
D9T12_RS06265 1479956 .. 1479984 -   -14  -5.80951   ACTGAAAATAAAAAA        GCCCGATAAGAA AGTTA TTCTCATCGGGC        TTTTGAATATGGCGT 100 35
        dusA NONE
D9T12_RS06245 NONE
        xseB NONE
        arsC 1470693 .. 1470703 -  -2.6  -4.44819   CACAAGATACCAAAA                 TAAT AGG ATTA                 GTTAAGTTACTCTGT  60 241
D9T12_RS06230 1470310 .. 1470340 -  -5.5  -2.64572   CAAATAATCAAGCTA       TCCGAGGAGAG GAAATATAA CTCTCCTCAAA       GCCCAATCAAAATTT  51 44
D9T12_RS06220 NONE
D9T12_RS06215 NONE
D9T12_RS06210 1466237 .. 1466278 - -18.9  -4.15006   ATATTGATTTTAAAA TGCAACCGGCCGGTAAAAA TTAA TTTCTACCGGCCGGTCGTA  AATTATCAGTGGCTG 100 84
D9T12_RS06205 1464568 .. 1464589 - -11.7  -2.71364   TTACTCTGTCAACGA           CTCTTTACC GGCC GGTAAAGAG            TTCTTTATATTCATT  81 45
        ubiG NONE
D9T12_RS06080 NONE
D9T12_RS06075 1439187 .. 1439201 -  -4.2   -5.0916   TTCTCAAGACAAAAA               CGAGCA ACG CACTCG               TGTTGAAGAGTTGCT  78 524
D9T12_RS06050 1431912 .. 1431926 -  -7.1  -5.84381   TTAGGAACAAAAAAA               CCAGC ACATG GCTGG               TTTCATACAAACGTT 100 178
D9T12_RS05990 1423892 .. 1423913 - -11.7   -5.0538   TCTTAGGTGAAAAAA           GACTTTACC GGCC GGTAAAGTC            TTTAATAACGCATAA 100 49
D9T12_RS05955 NONE
D9T12_RS05950 NONE
D9T12_RS05945 1410754 .. 1410771 -  -9.9  -3.24423   TGCAAGAATATTTAA             GGATTGG TTTT CCAATCC              TGCATTCCATAAGTG  77 4
D9T12_RS05940 NONE
D9T12_RS05915 NONE
D9T12_RS05905 1401769 .. 1401784 -  -7.6  -5.10526   ATAGGAAAAAATAAA              CTTACC GGCC GGTAAG               CTTTAACTGGCTGGT  93 49
D9T12_RS05890 1398912 .. 1398934 -    -5  -2.65409   TAATCATTAAGCAAG           TGATTAACTT TAG AATTTAATCA           AGCCAACGAACGGCA  49 19
D9T12_RS05845 1387292 .. 1387319 - -10.6  -4.72986   TAGTCGCATTAAAAA        TGCCCCTTCATC AAAA AATGAAGGGGCG         TGGCGGAATGGTTGG 100 87
D9T12_RS05810 NONE
        feoB NONE
D9T12_RS05800 1379048 .. 1379059 -  -4.4  -3.47307   GGAATAGTACCACAA                GGAT TTGA ATCC                 GTGTCTGGCAGTTTT  55 76
        pgsA NONE
D9T12_RS05790 NONE
D9T12_RS05785 NONE
D9T12_RS05780 1377683 .. 1377698 -    -4  -3.44381   ACGGAAGTTAAAAAC              GCTGCTG TTT CAG-AGC              TGCAAAAAGTTAATG  52 311
D9T12_RS05770 1374780 .. 1374809 - -11.5  -5.72616   ATTTATATAAAAAAA       TACCGGCGAGTAA ATCG TTACCGGCCGGTA        TTCTTTATAGGATTA 100 53
D9T12_RS05760 1369804 .. 1369827 -  -3.2  -3.86202   TTTGATCAGATTAAA          TTGCATCCG CTTTACT CGGA-GCAA          ATTTTGCAAAGAATT  53 456
D9T12_RS05750 1368083 .. 1368093 -    -4  -3.90112   TGCCCGGTAAGCAAA                 TTTG AGT CAAA                 GCTATTATTTCACCA  56 30
D9T12_RS05745 NONE
D9T12_RS05740 1365842 .. 1365869 -  -7.8  -3.73106   TGAAAACTGCAAGAA        GAACGTCTTTTT ATTT AATAAGACGCTC         ATCAAATGTTCACCG  72 46
D9T12_RS05640 NONE
D9T12_RS05635 1334954 .. 1334965 -  -2.2  -6.08342   GAATAAACAAAAAAA                CCTC CAAG GAAG                 CGATCCAAAGAGGTT  87 85
D9T12_RS05615 NONE
D9T12_RS05610 1329601 .. 1329621 -  -4.7  -3.99062   AAGATTTATGACAAA            GGCAATACA TTA TATCTTGCC            TTTCTTAACGGTGTT  61 77
D9T12_RS05605 NONE
D9T12_RS05600 1326247 .. 1326264 -  -4.2  -3.86346   TTACGTTCCTACAAA             CCATTA TTGGTT TAATGG              CTTGGTTCATGATTT  57 276
D9T12_RS05535 1312556 .. 1312571 -  -7.6  -2.90063   AAAAAAATTTTAAAG              CATACC GGCC GGTATG               TTCCTTGTAGCAGAA  64 85
D9T12_RS05525 1310487 .. 1310506 - -13.6  -5.40474   AGTGTTTCAAAAAAA            GGCCAGCA TCAT TGCTGGCC             TTTTTGTTTTTAACC 100 98
D9T12_RS05505 1303397 .. 1303412 -  -7.5  -5.28826   AAACGTTACAAAAAA              CCGGC TGAATG GCCGG               TTTTTTATTGTAAAT  95 118
D9T12_RS05490 1298320 .. 1298352 - -20.7  -3.16055   CAAAGTTCTTAGGAA      TCTTCCGGCCGGTAA AGT TTACCGGCCGGTAGA      AGAACTATTGACACT 100 57
        trxA 1297717 .. 1297751 -  -8.1  -2.89234   AAATGGGAGAAGAAT    TGGTTTGAATG-TTGT GAGC ACAAGCATTCAAACCT     GTCTATGGCCGTTTT  66 55
D9T12_RS05480 1296536 .. 1296554 -    -3   -4.4009   TGCCATTCTATAAAA             CCAAAGCT GGA AGCGATGG             TTGCTGAACAATTTC  61 277
D9T12_RS05415 1281710 .. 1281721 -  -4.4  -4.18161   TAGAAAGTTCCAAAA                GCAT AGTA ATGC                 CTCAAATAGTCCAGT  63 81
        recN 1279950 .. 1279970 -  -4.1  -3.07816   TCGTGATTTATGGAA            CTTACAA AGAGTAA TTGTAAG            TTTACGAGTTCAGTA  47 104
D9T12_RS05400 1278849 .. 1278899 -  -6.1  -2.92171   TAGATGTTTAAACGA TTGTTTACCGGCCGGTAGCTTTC TGTGC AATCTCTACCGGCCGGTCAAGAA TTCAAGGCGAGTGAA  55 71
        smpB NONE
D9T12_RS05380 NONE
        ssrA 1275641 .. 1275655 -  -7.1  -5.60993   TTTGGCATAAAAAAA               CCGGT ATGAA ACCGG               TTTAATTATGAAAGT 100 40
D9T12_RS05370 1272512 .. 1272531 - -10.7  -4.84527   GCCACACAGTAAAAA            GCCGCAG TCGTAG CTGCGGC             TTTTAAACAGTGAGA 100 102
D9T12_RS05335 1262990 .. 1263002 -  -3.4  -2.77043   TTGATCATTTTAAAC                GTGT GAATG ACAC                TTATGGTCATGATGT  43 440
D9T12_RS05320 NONE
D9T12_RS05315 1254597 .. 1254613 -  -2.2   -3.5241   GATGCTGGATAAATA              TCCGGA TAATC TCTGGA              TTGATACCTCTGTTC  47 415
        ylqF 1252658 .. 1252690 -  -4.1  -2.50935   ATTTTATTCACCAAG      GTATCAGTGCCAG AAAATCA CTGGCAATGGCAC      GAGATTATGTTCTAG  45 252
D9T12_RS05260 1244221 .. 1244252 -   -16  -5.45802   TTCCTAAAAGAAAAA      CGCCTTGGTTAATC AACT GTTTAACCAAGGCG       AAAGTCTTTAAAACC 100 57
D9T12_RS05255 NONE
D9T12_RS05250 1242711 .. 1242721 -    -4  -2.87344   GATCTTGTGTATAGA                 GTAT TTA ATAC                 TCTAAACGAGGCGCC  46 19
D9T12_RS05245 1241983 .. 1242007 -  -5.7  -5.95539   GTGTAAACAAAAAAA          GCTGTAATTCA TGA TGAAAAACAGC          TTTGTGTAGTGACGA  91 63
D9T12_RS05240 1240693 .. 1240731 -  -9.7  -2.65354   GTCACGTTAAATTTA   TTACCGGCCGGTA TCTTTTGAATTTT CACCGGCCGGTAA   GGAATTTTATTTGTT  74 101
D9T12_RS05230 NONE
D9T12_RS05225 1236180 .. 1236196 -  -4.5  -3.21465   AATCTAAAGCTAATA              TAAAAGT CTA ACCTTTA              TTTTGATAGCGCTTA  51 16
D9T12_RS05220 1235584 .. 1235595 -  -4.4  -2.84812   AGTCACAGCATTATA                CTGA AATA TCAG                 TAAATGCTGAAATGT  48 54
D9T12_RS05215 1235034 .. 1235052 -  -8.9   -5.0916   TTTTCAATATAAAAA             TACCAGC GTGTA GCTGGTA             TTTTAGACGTTTTTA 100 46
        rpiA NONE
D9T12_RS05205 1233604 .. 1233630 - -10.3  -5.76633   TCAGAGATAAAAAAA        CCACCT-GTCAT TAAC ATGACGAGGTGG         TTTTTGGAGAGGTCA 100 51
D9T12_RS05200 NONE
        hemL 1231512 .. 1231530 -  -8.9  -5.42259   TTACGCCTAAAAAAA             TACCGGA GCAAG TCCGGTA             TTAAAAATGGATTCA 100 91
D9T12_RS05190 NONE
D9T12_RS05185 1230278 .. 1230292 -  -4.2   -3.7941   GATTGGTGACAATAA               GAGTGA AAA TCACGC               ATTGACCGTGGCAAA  57 323
D9T12_RS05170 1224424 .. 1224446 -  -6.3  -3.29461   TAATCTGTTCGATAA           CGCCTTG AAATACGGA CAAGGCG           AAGTACACTTTACTC  59 386
D9T12_RS05140 NONE
D9T12_RS05135 1214423 .. 1214436 -  -6.7  -2.78463   AGTTGTGTGAGGAGA               GGTCT GACC AGACC                TTCCTCATTCCTATA  58 47
D9T12_RS05130 1213590 .. 1213637 -  -4.1  -2.50443   GGAGATTGGACTAAG TTGGAAGTTTGCCGGCCGGTA GAGCAT TACGGGCCGGTAAAGTTTCAT TTTTCACTTAAACGC  45 22
D9T12_RS05125 1212778 .. 1212790 -  -4.1  -3.32941   CAAAAGATAATGGAA                GAGAC CAA ATCTC                AGAATTCTAGATAGA  50 91
D9T12_RS05110 1206699 .. 1206733 -  -7.8  -2.52115   TAAATGAAAAGAAGC     GCGCTGAGGCAATTTT TAT AAGGTGGCCTCAACGC     TAAGTTTTAAGAAAA  62 58
D9T12_RS05105 1205798 .. 1205817 - -10.8  -5.61913   AATAAATATAAAAAA            CCACTTCA CTTG TGAAGTGG             TTTTTTTTTATGGAT 100 227
D9T12_RS05090 1201166 .. 1201197 - -14.5  -3.09556   AATGTTTGAATAAAG      CTACCGGCCGGTA AAAGAA TACCGGCCGGTAT       TTTTTTGTTTTTTAT 100 37
D9T12_RS05075 NONE
        cobO 1193890 .. 1193904 -  -2.9  -3.11687   TTAATGATTATTTAA               GATAA ATTTA TTATC               TTCACTTTTTGTTAA  45 485
D9T12_RS05035 1187597 .. 1187622 - -12.5   -4.7373   TTAGGTTATCAAAAA         CCACCGACTGG GAAA CCGGCCGGTGG          TTTTTTTATGCTTGG 100 180
D9T12_RS05020 1182240 .. 1182256 -  -9.5  -3.95219   CGCAAATTTCACAAA              TGAACTG TTC CAGTTCA              ATAATTTTATTGGTG  83 255
D9T12_RS04995 1177084 .. 1177096 -  -3.5  -3.87869   TTAATTCCTTACAAA                TAATA TTG TATTA                AAGTGTTTATTTAAG  55 263
D9T12_RS04990 1176571 .. 1176595 -  -7.2  -4.64766   TTGAGAGGTGAAAAA          GGGTTTGC TTTAAGGTT GCAAACCC          TTTTTGATTTGAAAC  81 54
D9T12_RS04980 1174159 .. 1174171 -  -3.5  -3.62478   TAATTAAGCGCGAAA                TATTA GCA TAATA                AAGCGTTTGAGAGGC  50 281
D9T12_RS04975 NONE
D9T12_RS04970 1171023 .. 1171035 -  -6.3  -3.05816   TTATTGTGTACCGAA                TAGTG TAC CACTA                TTTTGCAAAGGACCC  56 269
D9T12_RS04965 NONE
D9T12_RS04960 NONE
D9T12_RS04955 NONE
D9T12_RS04950 NONE
D9T12_RS04945 1168825 .. 1168840 -  -6.1  -5.27335   TTTGGCAAAGAAAAA              GCACC TGAATC GGTGC               TTTGATTATGATTCG  89 31
D9T12_RS04940 1165891 .. 1165920 -  -7.8  -3.92869   TGATCCAGCTAGAAA       TGGTGGGCAGGA TATTAC TCCGGCGCACCA        TCAATAAAGGTCTTG  74 10
D9T12_RS04920 NONE
        mnmA NONE
        hflD NONE
D9T12_RS04905 1160065 .. 1160076 -  -5.8  -3.09831   TTGAGGTGAAAAGCA                TGGC TTGT GCCA                 AAATAGAATATACAG  56 162
D9T12_RS04900 1158748 .. 1158774 - -16.8  -4.62872   ACTAATCTGCAAAAA         GGCCTTAAAGTT TTA AACTTTAAGGCC         TTTTTTATTTTAAGA 100 76
D9T12_RS04895 1157388 .. 1157406 -  -6.2  -3.39668   TCGTAAACTGGATAA             TTATTTAA CGA TTAAATAA             TCTGAAATCTATGTC  59 68
D9T12_RS04885 1154845 .. 1154867 -   -15  -5.72622   TTGATAAACAAAAAA           GGCTGAGAAT TTA ATTCTCAGCC           TTTTTTGTTTTAATG 100 82
        apbC 1143237 .. 1143263 - -15.3  -3.19668   GATGACTTAAGTTAA         GGAACCTCTGA TTCAG TCAGAGGTTCC         TTGAGTCACCGTCTT 100 48
D9T12_RS04830 NONE
D9T12_RS04825 1141763 .. 1141778 -    -4   -2.7728   CGGAAAGGTCAACTA              GCCTTT CCAA AAAAGC               TAGTGAATTTGGATA  46 25
D9T12_RS04820 1139446 .. 1139457 -    -3  -4.17448   TAACTAAATTATAAA                CTTT GCTC AAAG                 CGTCTTGATCTTGAG  55 100
        rsxA NONE
        rsxB NONE
        rsxC NONE
D9T12_RS04800 NONE
        rsxG NONE
D9T12_RS04790 NONE
         nth NONE
D9T12_RS04780 NONE
D9T12_RS04775 NONE
D9T12_RS04770 1130610 .. 1130622 -  -6.3  -3.60569   GAAAAAACTGAAACA                TTCCA ACT TGGAA                GAGAGGGCGACGTAG  63 477
        yhbY 1100165 .. 1100184 - -10.8  -5.79595   TTTGAAAATAAAAAA            GCCTTGTT TTAT AACAAGGC             TTTTTTGTGTTGAAA 100 78
        queE NONE
        rlmD 1082536 .. 1082562 -    -3  -4.09864   AGTGACTTCCCAAAA        GGCTTTCCGCA CGACAT TGCGGAAC-CC         ATTTTTTCAGGGCTT  58 188
D9T12_RS04520 NONE
D9T12_RS04515 NONE
D9T12_RS04505 1074756 .. 1074775 - -11.4  -5.10208   TAACTTGAAGAAAAA            CCCCAGCC TAAA GACTGGGG             TTGGGTTCAGATAAT 100 179
D9T12_RS04500 NONE
D9T12_RS04495 1071234 .. 1071268 -  -6.4  -3.50853   TTGGCGCAATGACAA     GAGTCGAGAAAGCCGC TTT GGAGTTTTTTCGACTC     TAATCGATTAGTGAG  64 33
D9T12_RS04490 1070719 .. 1070732 -  -3.1  -3.62046   TTACTTGCTCAATAA               TTCCC GTAA AGGAA                ATCTTAGCTAAAACC  50 29
D9T12_RS04485 1069377 .. 1069390 -  -6.7  -3.11687   GTAATCAGTACCGAA               TTGGC GGTT GCCAA                AGAGGTGCAGCGCCG  59 316
D9T12_RS04475 NONE
D9T12_RS04470 1066253 .. 1066266 -  -5.3  -2.79327   TTACCTTATCTAAAG               TTACC GGCC GGTAA                ACTTTCTAATGACAA  50 403
D9T12_RS04460 NONE
D9T12_RS04455 NONE
D9T12_RS04450 NONE
D9T12_RS04445 NONE
D9T12_RS04440 1060822 .. 1060836 -  -5.6  -4.37247   AAATCAAGCAACAAA               CGGGTG CAT CAACCG               GCTGTGGAAGTTGTT  70 107
D9T12_RS04405 1050215 .. 1050244 -  -5.1  -3.02829   TAGATTCTCTCAATA       TTCAGATGATTGT TTTC ACAATCGTTTGAA        AAGTTTAGCAGAATT  52 82
D9T12_RS04400 NONE
D9T12_RS04395 1049150 .. 1049174 -  -2.7  -2.74269   TTCAGATGACAGAAC          TCGGTGTGAGT AAA ACTGTCACCGC          ATGGTTATGGGCATT  42 451
D9T12_RS04385 NONE
D9T12_RS04380 1045234 .. 1045261 - -12.8  -4.82901   CGGCCGGTAGAAAAA        CGCCCAACAGAA AAAA TCCTATTGGGCG         TTTTTTATTTTAGGT 100 81
D9T12_RS04365 1042592 .. 1042604 -  -4.9  -4.04927   TGAATCAGCAAATAA                TCTTT TTT AAAGA                GCGCTTATTCTAGCC  63 19
D9T12_RS04350 1039422 .. 1039436 -  -5.7  -3.19936   AATTACCCAATGGAA               GTGCA TTTGG TGCAC               AAGGATGGCGATGGC  55 461
         lon 1034259 .. 1034272 -  -5.3  -3.23733   GTGACTTTATAAAAG               TTACC GGCC GGTAA                AGATTATGGCGCGAT  55 46
D9T12_RS04310 NONE
D9T12_RS04305 NONE
D9T12_RS04300 1027661 .. 1027690 -  -5.1  -2.96009   TAAAAAGTGTAGATA       TTGCCA-TCGTGAA GTT TTCACAACTGGCTA       AAGACGCGCGTCAAA  52 269
D9T12_RS04240 1016063 .. 1016080 - -11.3  -5.08255   AGCTCCAAAATAAAA             GAGGCTC TTCG GAGCCTC              TTTCTGTTGATCGTG 100 45
D9T12_RS04235 NONE
D9T12_RS04230 NONE
D9T12_RS04225 NONE
D9T12_RS04220 1013902 .. 1013917 -  -4.7  -3.94465   CTTAAAACCAAAAGA              GTGGA TTTTGT TCCAC               AGCTTGTGGATTTTC  61 339
D9T12_RS04210 1012359 .. 1012371 -  -4.9  -3.52539   TAAGCTTAATTAGAA                TTCAA AGC TTGAA                TTTTCATTGGCATTA  57 7
D9T12_RS04205 NONE
D9T12_RS04200 NONE
D9T12_RS04195 NONE
D9T12_RS04190 NONE
D9T12_RS04185 1006538 .. 1006553 - -10.4  -5.64274   TTACCCACAAAAAAA              CCCAGC TTGT GCTGGG               TTTTTTTATGACCGT 100 146
D9T12_RS04160 1001110 .. 1001126 - -12.3  -5.24531   AGTCGGCATAAAAAA              GCCAGCA AAT TGCTGGC              TTTGTGAGTCTGTTG 100 88
D9T12_RS04155  999958 ..  999973 -    -4   -4.0342   CTGAATGAACAACAA              CAGCAA TTGA TTGCTA               AATGGCAAAAAGACT  59 366
D9T12_RS04060  978236 ..  978262 -  -5.1  -3.53012   CCCTTGCGGTGCAAA         CCCATCCATGT GGGAT ACTCGAATGGG         TGCGACTCAGACCAT  57 70
D9T12_RS04055 NONE
        rsgA  976294 ..  976308 -  -7.2   -2.6072   TATTGAAGGAATTTA               CTATAG CAG CTATAG               AGTCTGTCTAAATAT  60 383
D9T12_RS04040  975801 ..  975824 - -10.3  -5.64274   TGAGTTATAAAAAAA          GCCGCAGCAG ACGAG CTGC-GCGGC          TTCTTGCTTCTTAAG 100 53
D9T12_RS04035  975299 ..  975324 -  -8.4   -5.4756   AAGCGCAATAAAAAA         CGCCAGCACTT TTTAT AAGT-CTGGCG         TTTTTTTATCGAAAA 100 74
D9T12_RS03970  959891 ..  959908 -  -4.1  -4.57073   CAGTTGCTGGAAAAA             CTGCAAG ATAA CTTTCAG              TTTATCTATTTAGAA  66 319
D9T12_RS03935 NONE
        soxX NONE
        soxY  952541 ..  952564 -  -3.1  -2.59837   ATCGTAAAGTAATAC          TGGGGTAGT GGATTA ACCACCACA           TCCACCGATTGTTAC  43 14
        soxZ NONE
        soxA  951211 ..  951226 - -10.4  -5.60689   TTAGACAATAAAAAA              CCCAGC ATAG GCTGGG               TTTTGAAAAGTTTTA 100 56
D9T12_RS03900 NONE
D9T12_RS03895  946620 ..  946645 -    -9  -4.91712   TTCAAGTCACAAAAA         CGCCATACTG GATTTT CAGTGTGGCG          TTTTTTTTGGCCTGA 100 63
D9T12_RS03880  943519 ..  943541 -  -6.5  -3.27109   TTAATTTAATTAAGA           TACTAAAAA GGTAG TTTTTAGTA           TGATTTTTCTATTCT  61 64
D9T12_RS03875  940459 ..  940471 -  -2.7  -4.15543   TAAACACTCGTAAAA                TCCAA ATT TTGAA                TGAAGTTGATGTAGA  57 434
D9T12_RS03865  938426 ..  938440 -  -2.8  -3.90588   GACCGGTGAATGAAA               CCGT TTGGACC ACGG               ATTTCTCGTACGACT  52 284
D9T12_RS03850  933901 ..  933918 -  -8.5  -3.76224   TTTTTATGCACCAAA             CTTAACC GGCC GGTTAAG              TTTTTCTTTTTCTAC  74 21
D9T12_RS03785 NONE
D9T12_RS03780  918288 ..  918300 -  -3.3  -3.04715   GACTCGGTGGAAAAG                GCGTT AAA AGCGC                TTAAAGACGATAACC  44 337
D9T12_RS03675 NONE
D9T12_RS03670 NONE
D9T12_RS03665  889284 ..  889300 -  -4.4  -4.26076   GTACTTTCAGCAAAA              CCCTGA TCGGG TCAGAG              GGGAGTTTGTGGTGA  63 236
D9T12_RS03655 NONE
D9T12_RS03650  886107 ..  886125 -    -6  -3.16564   TTCGTAGTTGAGGAA             CCTCTGAT TCA ATTAGAGG             TTCCCTAGGGTCTGT  58 346
D9T12_RS03620  878172 ..  878183 -    -3  -3.92324   GCCTTTAATACGAAA                TTTG AATT CAAA                 AAAGAACATATTATG  52 36
D9T12_RS03615 NONE
D9T12_RS03610  874927 ..  874959 -   -15  -3.90922   AGGTTCCCTAAATAA      CCGGCCGGTAAA GATCATTAA TTTACCGGCCGG      TTGTGTTTTGGCTCT 100 57
D9T12_RS03590  870524 ..  870537 -  -6.7  -3.51232   TGTTTTTTAAATTAA               TGCGT TTTA ACGCA                GTTTAACTCGTCTAT  64 486
D9T12_RS03580 NONE
D9T12_RS03575 NONE
D9T12_RS03570 NONE
D9T12_RS03565 NONE
D9T12_RS03560 NONE
        mvaD  863865 ..  863880 - -11.8  -3.74693   GTTCAGTTCATGAAA              GGCGCC AATC GGCGCC               TTTTTGGTTTTTGGC  91 43
D9T12_RS03500  853634 ..  853652 -  -3.2  -2.74192   GAGGCTGCAATAGGA             GAATTAAA TTG TTTCATTC             ACTCTGTCTCTTTTT  43 108
D9T12_RS03495  852334 ..  852352 -  -3.9  -2.64536   AATGAAATGAAGTTA            GGATTGAG TTGA CTCA-TCC             AGTTGAATTCGGATA  45 4
        pdxA NONE
        rsmA NONE
D9T12_RS03480  849124 ..  849149 -  -6.2  -3.18735   GTAAGAGTGCACCAA         TGATAAACCC TATTAT GGGTTGATCA          AATATTAGGCCGCCC  58 379
D9T12_RS03465  847649 ..  847672 - -10.3  -2.78996   GATTGTGATGTAAAG          CCCAGTGCC GACTTG AGCACTGGG           TTTTTAGTTTGTCAT  77 40
D9T12_RS03455  845887 ..  845903 -  -7.3  -3.53343   AATCTTGCTGGGAAA              TCTGCAG ACG CTGCAAA              AGAGATTAAAACGTT  66 459
D9T12_RS03440  840636 ..  840663 -   -20  -5.39681   ATAACCAAACAAAAA        CGGCCGGTTAAG AAAA CTTAACCGGCCG         GTAAATAACTTTGGT 100 59
        glnA  831083 ..  831099 - -12.3  -5.45652   ATTGGTAATAAAAAA              CCCGCTT TGT AAGCGGG              TTTTTTGTTTCGAAG 100 55
D9T12_RS03385 NONE
D9T12_RS03380  820733 ..  820750 - -14.1   -5.4251   TGTACACATAAAAAA             GCCCCGC GAGG GCGGGGC              AAGATTTGAGAGTCA 100 73
D9T12_RS03375  819946 ..  819975 - -10.9  -3.79689   AGATAAAAATGACAA       GCCCATTTTGA AGCCAGAG TCAAAATGGGC        TTTTTTGTGCTAACC  88 50
D9T12_RS03360  816376 ..  816395 -  -2.8  -4.40037   AAAGAAGCACTAAAA            CAGCAAAA TGTT TTACGCTG             AGAGCTTTGCACGAG  60 201
D9T12_RS03355 NONE
D9T12_RS03350  812436 ..  812476 -    -9  -5.42259   CTACTCGTAAAAAAA  CAAGACCGGCCGGTAAGT TATAT AGCTACCGGCCGGTTTTT  GTGTGCATTGATTGG 100 70
D9T12_RS03340 NONE
D9T12_RS03335  807985 ..  807998 -  -4.5  -3.58726   TCGGTTGATATACAA               GGAGA TTTA TCCCC                GCATGGATTACGCCA  57 220
D9T12_RS03300 NONE
D9T12_RS03295 NONE
D9T12_RS03290  799896 ..  799915 -  -4.2  -3.85698   TGGCTTTCTTACAAA            GCCGATTA ATAT TGACCGGC             TCAAAGAAGTGTTGT  57 152
D9T12_RS03185 NONE
        kdsC NONE
        lptC  777042 ..  777052 -    -4  -3.89336   TCAATGAAATTTAAA                 TTGA GCA TCAA                 TGCTAACGTTAATCG  56 115
        lptA NONE
        lptB NONE
        raiA  775028 ..  775045 - -11.3  -5.03994   GGCTAGATACAAAAA             CACCCCT GTTA AGGGGTG              TTTTCCGAAAACCGA 100 57
        mgtE NONE
D9T12_RS03150  772595 ..  772631 - -16.1  -4.07885   CACTTGGCGTTAAAA    TACAAAACGCCCGATGA AGT TCATCGAGCGTTTTTTA    CCTGAAAAAAGTGTC 100 127
D9T12_RS03100 NONE
D9T12_RS03095  754326 ..  754336 -  -2.4  -3.93262   TGTCAAGAGAGCAAA                 GGTC AAC GCCC                 ATATATTGATCAAAA  53 409
D9T12_RS03085  752727 ..  752751 -  -5.1  -3.92522   CTCTAAGTTGAGAAA          GGTAAAGTC ATAAATA AACTTTACC          TGAAATATGGCTCCC  61 33
D9T12_RS03080  752599 ..  752617 - -11.8   -5.5604   TTAAGGAATAAAAAA             GCTAAGCA AAA TGCTTAGC             TTTTAAATATGGCTC 100 35
D9T12_RS03075  752420 ..  752442 -  -6.4  -3.21593   TACGGTCGTACAATA           TGCAAATAAC TGA GTTATTTGTA           GGAAATGGTACCAGA  61 31
D9T12_RS03070  751946 ..  751957 -  -7.2   -3.8482   CAAAAGCAATTCAAA                GGCC AACA GGCC                 CAGATGAAAAGTTTG  71 405
D9T12_RS03065 NONE
D9T12_RS03060  748592 ..  748608 -  -5.1  -3.63968   CTGCAAAGCCGTAAA              GATAGCA TTC TGCAATC              AGTGCGCAAAACGTT  59 181
        umuD  745120 ..  745132 -  -4.7  -3.06528   AAATTAAAAATATCA                GTCGC TTA GCGTC                GTAAAACAAACTGGA  52 454
D9T12_RS03040  742625 ..  742637 -  -2.7  -3.27786   CCGAAAATGCATTAA                TCAAA ATA TCTGA                TACTTAATTTTGCAA  45 175
D9T12_RS03035  740962 ..  740972 -  -3.2  -3.74224   CTGAAATGATTCAAA                 CAGC ACC ACTG                 AACCCCAAACACCCA  53 418
D9T12_RS03020  738980 ..  738993 -  -3.9   -2.8664   GATTCAATCACCAGA               TTTTG TAAA CAAAA                AATACATTTTTAAGA  46 185
D9T12_RS03015  735339 ..  735352 -  -4.5  -3.80573   TGGAGTATGATCAAA               GCCAA ATGG CTGGC                CCGCCGTTTTCAGTC  59 176
D9T12_RS03005 NONE
D9T12_RS03000  733343 ..  733368 -  -2.5   -3.2827   TTAGTGAATTACCAA         GAACGAAGAGG TGTG CCCTTTCTTTC          GCCTATTTCTTTGGG  45 127
D9T12_RS02975  726557 ..  726576 -  -4.2  -3.10409   GATGAAGCGATGCAA            GCCACTTC GCTT GAAGCGGG             CGCGACGCATATCCA  49 365
        ectA  722298 ..  722328 -  -6.4  -3.58343   TTTATTATTGTTAAA       CGTAATAAAAAT AGTTGTA ATTCTTATTACG       ATTTTATGAATTTAG  64 60
        ectB  720923 ..  720938 -  -4.7  -3.92075   ACTGTGATTCATAAA              GGCTT TATGGC AAGCC               TTTATGAGGTTGTGT  61 77
D9T12_RS02950  720131 ..  720152 - -10.9   -2.7556   AATCTCATTGAATGA           GCACCCATT AAAA AATGGGCGC            TATTTTACCGATTGT  78 320
D9T12_RS02945  718543 ..  718566 - -13.2   -5.4593   CCAAAAGAAGAAAAA          GCGACTTGGA AAAG CCCAAGTCGC           TTTTTTAAGCGTCGA 100 83
D9T12_RS02940 NONE
        dauA NONE
D9T12_RS02930  714557 ..  714570 -  -6.7  -4.62069   TGTCCATTTTAAAAA               CTACC GGCC GGTAG                GAAATGAACGTTTTT  78 156
D9T12_RS02925 NONE
D9T12_RS02920 NONE
D9T12_RS02915 NONE
D9T12_RS02910 NONE
D9T12_RS02905 NONE
D9T12_RS02900  708405 ..  708429 -  -9.4  -3.69094   AACTGACCACTGAAA          CTGGGCAAAA GGTTT TTTTGCCCAA          GTATATTTGAAAAGT  81 44
D9T12_RS02880  701777 ..  701790 -  -2.4  -2.73159   CCAACCGTCCCAAAG               CACA TTATTC TGTG                TCAGCGCTGCCAAAT  40 16
D9T12_RS02860  698054 ..  698077 - -10.4  -2.52156   TGACAATGAAGAGAC          TCAGCAACCA GGGA TGATTGCTGA           TAGAGCCGCATTTGA  73 102
D9T12_RS02850  696310 ..  696332 -  -4.1  -2.52795   AATCCTTTTAATTGA           GAGACGGTC GATGA AACAGTCTC           TATTTAAAGCGACAA  45 115
D9T12_RS02845  695388 ..  695419 - -13.1  -2.74605   TTTGTCGAAAATTGA      CCAGAGGGTCGAA TGTCTG TTCGACTCTCTGG       GAAGTATTAGAAACC  88 47
D9T12_RS02835  692101 ..  692115 -  -2.8  -3.89875   AAGACAAGAATAGAA               GCCA TAGGCGG TGGC               AATTCCTTTAGTGAG  52 298
        aroQ NONE
D9T12_RS02825 NONE
        accC  689693 ..  689714 -  -5.9   -5.4505   GCTTTTAAGAAAAAA           CCACAAG-GT TTG ACGCCTGTGG           TTTTTTGTAAAAATC  91 54
D9T12_RS02815  688629 ..  688640 -  -2.2  -3.97947   GGGATGCAGTACAAA                GAGA ATTT TCCC                 GCACAGATTCGGGTA  51 110
        dusB NONE
D9T12_RS02805  687196 ..  687206 -  -6.8  -3.54424   TGTGATTGGCTTAAA                 CTGC CAC GCAG                 AATAAGGGGTGATTG  64 114
        purH NONE
D9T12_RS02775  678106 ..  678133 -  -5.7  -3.75418   TATAGAAACGTCAAA        GATTATCGTTT TGATTC AAACGATTATC         AATTTTTTCGTTAAA  60 145
       cas1f  674478 ..  674496 -  -4.6  -2.52795   AATGCGGCTAACTCA             GCTTAAAC AGT GTTTAAGT             GTTTCAAATAAATAA  47 4
        purD  673038 ..  673077 - -15.9  -4.58724   TAAAGAGAATCAAAA  GAAAAAAGCGCCAAAGG GTAATT CCATTGGCGCTTTTCTC   AGAGTTGTTGAAAGC 100 50
D9T12_RS02755  670952 ..  670966 -  -2.8  -3.33412   GAAGTCCACATAACA               GACAGT TGA ACTTTC               CCTTGTTTTTCTTAT  46 168
        ccmA NONE
        ccmB  669483 ..  669512 -  -4.1   -3.6422   GATTTTTTCAAAAGA       CGCCATGAATCCA TCCG TGGAGGCTCGGCG        AAGACCGTCCTTGCT  52 93
D9T12_RS02740 NONE
        ccmD NONE
        ccmE NONE
D9T12_RS02725 NONE
D9T12_RS02720 NONE
D9T12_RS02715 NONE
D9T12_RS02710  663589 ..  663610 -  -4.5  -2.70932   TTCTTTTGTTAATCA           TTCGCAA TGCGGATG TTGCGAA            TAAAAGTTGCATAGA  47 169
D9T12_RS02705  662856 ..  662869 -  -3.1  -3.64703   CTTTTTTCATGTAAA               CTCCT CCTC AAGAG                TCTAGGTTTGTTCCA  52 110
D9T12_RS02700 NONE
D9T12_RS02695  660901 ..  660918 - -10.5  -5.36441   TGTGCATACAAAAAA             GCCCCGC TAAA GCGAGGC              TTTTAGAGAAAGAAC 100 53
D9T12_RS02690  657925 ..  657953 -   -19  -4.91852   TCGAGCAAAAAGAAA        CCGGCCGGTAAA TAATT TTTACCGGCCGG        TTTTTTTATGCCAAT 100 58
        tsaD  651757 ..  651772 -  -4.7  -3.79164   GGACAAAGAAATGAA              CGAAG AGTTGA CTTCG               ATAAGCTTAAAAGAA  59 63
        folB  650110 ..  650138 -  -8.9  -3.78022   TTTATATGGAGCAAA        TTGTGCCGATTTT GAA ACAAGCGGCACAA        GAACAAAAGAAAATT  78 357
D9T12_RS02640  647721 ..  647733 -  -4.1  -3.19192   TTGTAGCCAATCTAA                CATAG AAT CCATG                AGTCTTTATCTTTTG  48 54
D9T12_RS02635  646862 ..  646879 -  -4.9  -3.42346   AAGACTCTAGCATAA             CAATGAC TCCA ATCATTG              GGTGTTGAAGGTTAT  55 69
D9T12_RS02630  644788 ..  644805 -  -5.5  -3.03771   TGAGACGCTTCAAGA             GATGGAC TGTC GACCATC              TTGGGTTGAGTTAGA  52 463
D9T12_RS02610 NONE
D9T12_RS02605  636218 ..  636230 -  -4.1  -3.37198   GTTTTAGACATAACA                GTTCC TCG AGAAC                AGAAGATTTTATATT  50 246
D9T12_RS02600  635012 ..  635037 -  -7.7  -3.66178   GTGTTGAATTTTAAA         TGTTGAATGAC ATTT ATCATCCAACA          CTTTGCATTAAAAAT  72 41
        metF NONE
D9T12_RS02590  633368 ..  633379 -  -3.6  -3.43411   GAAAATGTTAAAAAT                CCCC CCAA AGGG                 CTTGAGCAATCGTTA  50 6
D9T12_RS02585  630814 ..  630824 -  -3.2  -4.43844   TTAGCACGCATAAAA                 TGAC TAA GCCA                 TGACGACACGGTTAC  62 18
        gshA NONE
D9T12_RS02575  628160 ..  628175 -  -3.2  -4.10657   CGACATTGGCTAAAA              GCTTGC ATGA GGAAGC               TGTGTTTCCAAATGG  57 4
D9T12_RS02570  626626 ..  626646 -  -3.9  -3.34398   GCTGTGTTCTAAAGA            GTGCATATG TTT CATAGGCGC            AATTATAGCAGGGGG  50 353
D9T12_RS02565  626074 ..  626092 -  -3.1  -3.36327   TTATCTTAGCCATAA             TCAGGCA TTCCC TGCATGA             GTGCTGAGCATGCTT  48 7
        ruvX NONE
        pyrR NONE
D9T12_RS02550 NONE
D9T12_RS02545 NONE
D9T12_RS02540  621478 ..  621490 -  -3.3  -3.40907   TTACACCAATACTAA                CCATG CGC CTTGG                ACAGTGATTAAATCA  49 478
D9T12_RS02525  619691 ..  619714 -  -6.7  -4.23207   CAAAAAGGAGATAAA          GCCCGAGTA GTCAAT TACTTGGGC           TTTTTTATGTGTTGA  73 62
D9T12_RS02515 NONE
D9T12_RS02510 NONE
D9T12_RS02505 NONE
        metW  615068 ..  615095 -  -7.8  -3.78329   TGTTATCAATTTAAA        CTCGGCA-AGGAA TAT TTCTTTTGCCGAG        TTTTTATGGGAAAGC  72 52
D9T12_RS02490 NONE
D9T12_RS02485  612454 ..  612479 -  -4.1  -3.87149   TTGAGCAAAGCCAAA         TCCATCTTTTT ATCC AAAAAGCTGAA          TTAATCGAAACTATG  57 156
D9T12_RS02470 NONE
        lysA  609195 ..  609209 -  -3.6  -3.60296   CATTTCTATCCCAAA               GTTTCT TGA AAAAAC               GTCAACTAATTAGCT  52 27
D9T12_RS02415  595796 ..  595817 -  -8.9  -2.87344   TATGCTTTGGATACA           TTATTTACC GGCC GGTAAATAA            TGTACTGAAATCACC  69 158
D9T12_RS02380 NONE
D9T12_RS02375  587326 ..  587348 -  -5.6  -4.37886   TCAGTTGTGACAAAA           CCATAGAATT TAC ACCTCTATGG           CGTGAAAATGCCTAC  70 146
D9T12_RS02370 NONE
        pdxH  585211 ..  585226 -  -4.8  -3.09518   CTAAAATGGTGAATA              GTTTTT TCAT AAAAAC               CTCTCTTAACTAAAG  52 43
D9T12_RS02360 NONE
        msrA  583800 ..  583818 -  -2.4  -5.27335   TTGCCGAAACAAAAA             CGCAAA ATCATCG CTTGCG             AGAGATTGCTGAAAA  75 285
D9T12_RS02315  575501 ..  575511 -    -4  -5.49809   CAAATTCGAAAAAAA                 TGAA TGT TTCA                 TTGTAATGAAAATTA  81 205
D9T12_RS02310 NONE
D9T12_RS02305 NONE
         amt  570620 ..  570631 -  -4.4   -3.6715   GTATTGAATTGTAAA                TGCT TTAT AGCA                 TTCTAATAGAAAGGC  57 257
D9T12_RS02295  569783 ..  569803 -  -7.5  -3.52668   AATTCATTGATAGAA            GAGGGCAAA AGA TATGCCCCC            TAGATAGTGGTATGG  69 226
D9T12_RS02290 NONE
D9T12_RS02285  568067 ..  568084 - -14.1  -4.27316   CGTTTTAACGTAAAA             CGGCCGC ATAG GCGGCCG              TTATCTTAACAATTA 100 49
D9T12_RS02280  567591 ..  567602 -  -4.4  -3.51411   ACTTTGGCAAATGAA                TGGT TCAA ACCA                 ATTTAGAAAAAACTC  55 18
D9T12_RS02220  554924 ..  554937 -  -3.9  -4.42386   CGGGCACTCATAAAA               GAATT AACA AATTC                TTCAACTAAGGTTGA  63 117
D9T12_RS02205  549878 ..  549889 -  -5.8   -3.2964   AAACTTTTGTGATAA                TGCG ATTG CGCA                 GTTTAAGCAAATGGG  57 507
D9T12_RS02195  546998 ..  547009 -    -3  -4.18762   AATTTTCAGGTAAAA                CATA AGGT TATG                 TAGAGATTACAGTGA  57 238
D9T12_RS02190  540633 ..  540667 -  -6.3  -2.78679   CTGTCTCATTCAAAG     TTGACCGGCCGGTAA GGTTT CTACCGGCCGGTGTT     TGTTATGTGTTGCTG  55 45
D9T12_RS02185  539180 ..  539198 - -13.2  -3.63922   AGTTCTCTGAAAAGA             CCGGCATT TTT AATGCCGG             TTTTTTGTGGGCAGA 100 338
        trmB  530083 ..  530103 -  -6.9  -3.80877   TGACGTTAGAAAATA            TCACTTTGC AAG GCAAAGCAA            AAATTCAAACGCCAA  67 100
D9T12_RS02130 NONE
D9T12_RS02125  522576 ..  522602 -  -6.7  -5.24531   AGTTTTTATAAAAAA         GCACTGAAA TTGATTTGG TTTCAGTGC         TGTTGGGATGATTTA  86 38
D9T12_RS02120  522156 ..  522171 - -11.8  -5.80817   TTTAATACAAAAAAA              CCCCGC GTGA GCGGGG               TTTATGTTCAGGCTT 100 65
D9T12_RS02115  519435 ..  519446 -  -4.4  -2.94322   ACCCCATTTAAAGTA                TACC GGCC GGTA                 GCTTTATATTTGTTA  50 38
D9T12_RS02110  518131 ..  518153 -  -4.8  -4.51812   GCCCAGAAGAATAAA           TTTCATGGTC GGA GTCCTTGAAA           GGGTCATTAAAAAAT  68 399
D9T12_RS02105  517173 ..  517183 -  -5.4  -4.63527   TGAGGACTTTAAAAA                 CACA AAA TGTG                 GATAAAGCAGAAAAC  73 331
D9T12_RS02100 NONE
D9T12_RS02095  512359 ..  512388 - -16.7  -2.64218   ATTCCCTAGTAGAAC       CGTAAACATTACC GGCC GGTAATGTTTACG        TGAATGATGCGATGC 100 114
D9T12_RS02090 NONE
D9T12_RS02085  508762 ..  508790 -  -3.1  -2.67981   ATCTCACCAAATTGA        GTCCATCCTTGGT TAT ACCGAAGATGAAT        CCCTTATCCACCGAG  42 104
D9T12_RS02060  504245 ..  504278 - -15.4  -3.48824   GATTTTATAAGAAGA     TTTACCGGCCGGTA GAGATT TACCGGCCGGTAGA      GATTTAGCGGCCAGT 100 75
D9T12_RS02050  502769 ..  502781 -  -6.3  -3.21225   TTAAAAAGTACTTAA                CAAGA GGC TCTTG                CTTTAATGGAATTTA  58 72
D9T12_RS02030  496622 ..  496633 -  -4.4  -2.83522   ATTGTTGGACTAAAT                CAAG TGAG CTTG                 GCTATTTTTTCTTGG  48 122
        uvrA  488850 ..  488872 -  -3.5    -4.208   TGCCAAAAGGATAAA           CTCATTC TGTTCCATT GAATGAG           AGAACAGGACGTGCC  59 212
D9T12_RS02005  486539 ..  486569 - -12.6  -4.46254   GCAACACATAACAAA       CACCGGCCGGTA GAAACCT TACCGGCCGGTT       CAAATCTATTAATAT 100 62
D9T12_RS01740  433676 ..  433690 -  -2.8  -3.27743   TAGCACGAACCAACA               CACC GCAATAA GGTG               AAGTTAAGGGTTTTG  45 29
D9T12_RS01735  431756 ..  431769 -  -2.3  -3.77325   CACAATCAAAATGAA               GCCTT TGCC ATGGC                GGATTCGGTTGGCGT  51 484
D9T12_RS01715 NONE
D9T12_RS01710 NONE
D9T12_RS01705 NONE
D9T12_RS01700  421621 ..  421633 -  -3.3  -2.72043   AATGTTCGGTTAAAT                TCTGC ATG GCTGA                TAAAGCTCCAGATCT  43 86
D9T12_RS01695  421279 ..  421295 -  -6.7  -3.07443   GTATATTTTATGTAA              TAAATTC ATT GAATTTA              TGGGTCTTGGTGGCT  60 61
D9T12_RS01690  419037 ..  419063 - -10.1  -4.84363   TGAAACCATCAAAAA         GCCCGTGAGGC GCATG GCCTGACGAGC         TGATTTCTAAAAAAA 100 57
D9T12_RS01685  416479 ..  416507 - -13.3  -5.26316   TTACTCGATAAAAAA        GCCCAAAAACAAC GTT ACTGTTTTTGGGC        TTAGGAGATTAGTCA 100 61
D9T12_RS01680  414905 ..  414916 -  -3.6  -2.61216   TGACCAAGCAACTCA                GCAG AACG CCGC                 CTTGGTTGAAGAGAC  45 122
D9T12_RS01675  413926 ..  413940 -  -7.1  -2.57463   AAGCGTTGCGAGAAC               GTGCG GTGGT CGCAC               AAGAAGAGTTGCAAA  58 375
D9T12_RS01665  412629 ..  412656 -  -7.1  -4.10657   GTAGAGCTTCCAAAA        GAGTCTAATCA TTCAAG TGGTTAGACTC         TAATTCCAATAGTTG  73 2
D9T12_RS01630  405869 ..  405887 -  -2.4  -2.53271   CGATTTTCATAATAG             TCACTCTC CTT GAAAACGA             TATTATGGATTATAG  40 50
D9T12_RS01625 NONE
D9T12_RS01620  403727 ..  403739 -  -2.7  -3.84406   GGTTTATCATAACAA                CCAAT GTC ATTGA                GGCTACTGTACTCAA  52 156
D9T12_RS01615  391911 ..  391944 - -17.7  -5.28826   AAAGCTCATAAAAAA     CGCCTATTTCTTACC GGCC GGTAAAAAATAGGCG      TTTCGCTTTTTATAA 100 82
D9T12_RS01570  379394 ..  379404 -    -4  -5.32882   CATCATGATAAAAAA                 TTTG TGG CAAA                 ACTTAAAAACCATGA  81 331
D9T12_RS01510  365597 ..  365610 -  -3.1  -2.89837   ATTTGAAAGTAATTA               GTCAT CTTT ACGAC                GGTTCATAATATATG  44 9
D9T12_RS01505 NONE
        bioD  363659 ..  363672 -  -2.4  -3.58343   TCCATCATCCTGAAA               TTCG TGAAAT CGAA                GGTGTTGATTACTTC  49 385
D9T12_RS01485  361634 ..  361661 -  -9.3  -4.51174   TCATCATAATGAAAA        CGGCTTC-TAAG TTTGT CTTAAGAAGCCG        TTTTTGTATTCAGGA  91 55
D9T12_RS01355  331939 ..  331975 -  -7.5  -3.78409   CCAAGCCAAGGCAAA    TGGTAGAAATCAAAC TGTACTC GCTTAATTCCTACCA    AGTTTTAATGTGGGA  72 68
D9T12_RS01345 NONE
D9T12_RS01340 NONE
D9T12_RS01335 NONE
D9T12_RS01330  326110 ..  326120 -  -5.4  -3.33696   TGGTTTTTCAATCAA                 GCAT TGG ATGC                 AGCCGCCTTAATTGG  55 154
D9T12_RS01320  325197 ..  325221 - -15.8  -5.84381   TTAGGAATAAAAAAA          CCGCGAATGG AAAAA CCATTCGCGG          CAATTTCTAGCATTA 100 53
D9T12_RS01305 NONE
D9T12_RS01300  321340 ..  321362 -  -8.5  -5.80248   CAAGACATAAAAAAA          CCGAGATAGC AGAT GCT-TCTCGG           TTTTTTATTCTGCAG 100 201
D9T12_RS01290  319371 ..  319390 - -12.2  -4.52345   ACAGTACGAAAGAAA            GCCGGTAA AACG TTACCGGC             CGGTGACAAATTGGA 100 42
D9T12_RS01285  317615 ..  317629 -  -8.6   -2.6732   TGCCAATTCAAACAT               CATAGG CCT CCTATG               CAGAGCGAGTTTTAA  68 21
D9T12_RS01280  316274 ..  316288 -  -2.8  -3.77241   AAAGCGTAACCCAAA               CAGC GCAGCAA GCTG               AATCGAGCTGCTGTT  52 77
D9T12_RS01250 NONE
D9T12_RS01245  307507 ..  307519 -  -6.3   -4.1466   ATCTAAGCGGTAAAA                GTCTT TAA AAGAC                ACTGTGAATCCCTTC  67 114
D9T12_RS01240 NONE
        hisI  305790 ..  305821 - -13.1   -4.8622   CGCCGCAACGAAAAA      TGGCCTTGGATGC TGTTGT GCATTCAAGGCCA       TTTTTGTATTCAGCA 100 55
         rep NONE
D9T12_RS01195  293752 ..  293763 -  -4.4  -3.59979   GGGCTTTATTTGAAA                CGAT TTTT ATCG                 CTGTAGTTTTCACTC  55 40
D9T12_RS01170  288396 ..  288410 -    -5  -3.34013   TATCCGGTGAAGTAA               CCATAA CCG TTACGG               AATTGGTCTTTTACT  55 149
D9T12_RS01150  281624 ..  281634 -  -6.8   -5.1861   TTGATGAGTAAAAAA                 TGGC TTT GCCA                 TAAATTAAATACGTT  86 86
D9T12_RS01140 NONE
D9T12_RS01135 NONE
        rsmB NONE
D9T12_RS01125 NONE
D9T12_RS01120 NONE
D9T12_RS01115  272830 ..  272840 -    -4  -3.61178   TTTATCGACTGCAAA                 CTTT CAA AAAG                 GGTTTTTGGGATCAA  52 18
        trkA NONE
D9T12_RS01105  269816 ..  269830 -  -3.5  -3.01791   AGGCCTTGTCTAAGA              GC-GCC AGAA GGCAGC               AGTAAATAGGACTAA  45 5
D9T12_RS01100  268912 ..  268932 -    -4  -5.06451   GATTATTGCAAAAAA            CCAAAGCA GCCTG TGTTTTGG            CGGTCGCTTTGCGTG  74 290
D9T12_RS01085  265988 ..  266022 - -16.5  -3.01791   ATTTTCTCTTTAATA     GGCTACCGGCCGGTA AATGA TACCGGCCGGTAACG     TTGTCGATGTTGTGT 100 49
D9T12_RS01080  265128 ..  265140 -  -6.3  -3.35371   CAGATTGCCAACCAA                GCATT AAA AATGC                AGAATTCGATTGAGC  59 283
D9T12_RS01070  261883 ..  261893 -  -5.4  -4.07568   GTCGTCTTGGTAAAA                 CGTA CCA TACG                 AGATGAAGATCTATT  63 430
D9T12_RS01055  258114 ..  258140 - -10.8  -3.65199   AATTTTTTATTTAAA         GCAGCCTTTCGA GAT TCGATTGGCTGC         TTTTTTTTACAGTTA  88 49
D9T12_RS01040  254519 ..  254529 -  -6.8  -3.30159   GGAATGGGCTGATAA                 GGCA GTA TGCC                 TTATCTTTTTGGTAG  62 74
        metH NONE
D9T12_RS01030 NONE
D9T12_RS01025  248819 ..  248841 -   -15  -4.38171   TAGACTAGATTAAAA           GCAATGGAGT CTC ACTCCATTGC           AGCTGTGTTGGAAAG 100 63
D9T12_RS01020  247085 ..  247100 - -10.4  -5.08011   AAAACCGCTAAAAAA              GGCCGT TAAA ACGGCC               TTTTTAGGTTTGAGA 100 53
        dbpA  243783 ..  243802 -  -3.6   -3.2613   AATAATGACCATGAA            TTTTTACC GGCC GGTAAAGA             CCGGTAAGTTAGGCT  48 111
D9T12_RS00995  243099 ..  243119 - -11.2  -5.44119   TCGAGGTGAAAAAAA            TGCCCCAT ATAAA ATGGGGCA            AGGGGGGGACTTTTA 100 52
D9T12_RS00990  242019 ..  242029 -  -2.6  -2.79321   CTGATAGCAACATTA                 TATT CCT AATA                 TGCATAGTTGATTGC  42 64
D9T12_RS00985 NONE
D9T12_RS00980  241254 ..  241266 -  -3.3  -3.52906   TTAGTGCGATAAATA                TCGGG ATA CCAGA                GAACTTTCTAGCTAT  49 153
D9T12_RS00965 NONE
D9T12_RS00960 NONE
D9T12_RS00955 NONE
D9T12_RS00950 NONE
D9T12_RS00945  235839 ..  235860 -  -2.9  -3.28269   AAGGGTCAAATTCAA           GCCGTTAGT AAAG AATACCGGC            CGGTTATGGTTCCTA  45 52
D9T12_RS00940  235073 ..  235086 -  -2.4  -3.83675   CAAGTTAATGAAGAA               TGAC TCTTTG GTCA                AGATATGAAGCGAAA  51 146
D9T12_RS00935 NONE
D9T12_RS00930  231862 ..  231879 -  -4.1  -3.11634   GCGCAGAGTATTTAA             TGAGCAC AAAA GTGATCA              CACCCTATCGAGTGT  49 314
D9T12_RS00920 NONE
        bioH NONE
        bioC  224783 ..  224799 -  -2.1  -3.91084   TTATGGGCAATCAAA              GCTGGCT TGG AGCTCGC              GTTGCAACCTAAAAT  53 264
D9T12_RS00890 NONE
D9T12_RS00885  219389 ..  219418 -  -5.8  -3.30239   ATGTAAAGATGAATA       TACCGGTTTC TGAGGTGGGT GAAACCGGCA        TGGAGTCGTTTTTTT  59 39
D9T12_RS00880  218092 ..  218119 -  -2.7  -3.57587   ATCACTTAAAGAAGA        GTTTACAGCTG TGCCCT CAGTTGGAAAC         CTTTCATGCCTTGGC  50 191
D9T12_RS00855 NONE
        argH  211017 ..  211058 -  -5.1  -4.18018   CTGCGTTACCGAAAA TGTTACCGGCCGGTAGACTT TAA AGGTTTACCGGCCGGTTG-A TTTAATCGTTTATAA  63 35
D9T12_RS00840  209405 ..  209419 -    -5  -4.07568   GGGCGTTCCTGAAAA               TCAACA ACA TGCTGA               AATTCTATATCGGTT  61 459
D9T12_RS00830  207494 ..  207512 - -10.3  -5.38054   TTTTATAAATAAAAA             GGCTCTC GTTAA GAGAGCC             TATTGAGTTTGATTG 100 60
D9T12_RS00825 NONE
        trxC  205797 ..  205820 -  -3.4   -2.7898   TGCAACAGTTAATCA          TTTAA-AACAA TAT TTGTTATTAAA          TATTAAACAATAGTA  44 84
D9T12_RS00815  204863 ..  204873 -  -6.8  -2.77895   TCGATTCTGAATAAC                 TGGC TTT GCCA                 TAAATTAAACGAGTT  58 57
D9T12_RS00810  204367 ..  204382 -  -3.2  -4.57569   GGAGCTTCTTAAAAA              CCAATG TGAG CAGTGG               CAACAAACGGAATCT  63 120
D9T12_RS00770  195407 ..  195430 - -10.4  -5.48825   TATGACGTAAAAAAA          GCGCTT-GAGA AAC TCTCGAAGCGC          TTTTTTAAACAAATC 100 56
D9T12_RS00745  188313 ..  188328 -  -4.8  -2.51888   TGGTAAACGGAATAC              TCTTTT GCAA AAAAGA               ACTCAGATTTTTTTG  49 245
D9T12_RS00740  185799 ..  185813 -  -2.8  -3.80466   ATGATATAACAAATA               CTCCTT TTA AAGTAG               GGTTTTTAGATTCCT  50 128
D9T12_RS00735  185358 ..  185383 -  -3.1  -4.66609   CATTGCAGTCAAAAA         CGCCGCCGAAC TTAG GCTTAGCGCCG          AGCAAGTTAAAAGTC  65 181
D9T12_RS00725  183130 ..  183155 -  -9.1  -2.78935   ATAGGGGCGATCAGA         CTTATTTAGCG ATAA CGCTAAATACG          GATTGCGCTTGGTCA  69 1
D9T12_RS00720 NONE
D9T12_RS00715 NONE
D9T12_RS00710 NONE
D9T12_RS00705  178944 ..  178956 -  -3.3  -4.70046   GAGAAAATTACAAAA                GCGAC CAA GTCTC                AAATAACTACAACAT  64 259
D9T12_RS00685 NONE
D9T12_RS00680  173604 ..  173628 - -16.5  -5.61881   CTCGAAAAACAAAAA          CGCCGCAAAGA TGT TCTCTGCGGCG          TTTTTTATTGCTTTT 100 50
D9T12_RS00670  171459 ..  171477 - -14.6  -5.68438   CTAGGAAATAAAAAA             GCCGGTCA ATT TGACCGGC             CGGTAACAACTTAGG 100 54
D9T12_RS00665  170970 ..  170986 -  -2.4  -3.81926   TATTCCAAAAAGGAA              TTTTAA GGCCT TTAAAA              AGGATGGAATTAGTT  49 51
D9T12_RS00660  170582 ..  170608 -  -9.5  -3.87994   ACCTAGTCTGATAAA         CGCCAACTGAA TGTTT TTTAGTTGGCG         TTTTTTTATGCCTGC  83 66
D9T12_RS00645 NONE
D9T12_RS00640 NONE
D9T12_RS00635 NONE
D9T12_RS00630 NONE
D9T12_RS00625 NONE
D9T12_RS00620  161171 ..  161197 -  -2.2  -5.48063   ATTCAAGACAAAAAA         CCTCCTGCCT TCATCTT AGGCAAAGGG         CTTGAGTGGTTGGAC  76 108
D9T12_RS00600 NONE
D9T12_RS00595  154791 ..  154815 -  -4.5  -4.54047   TGATTTTATACAAAA          TAATAATATAA AGT TTATATTTTTA          TGTATTTCCAACCAC  68 15
D9T12_RS00590 NONE
D9T12_RS00585 NONE
D9T12_RS00580  150098 ..  150110 -  -9.1  -2.89793   CCATGTACACAATTA                GGCGT TAA ACGCC                TGCTAAGACAAATTC  69 17
D9T12_RS00575  147660 ..  147680 -  -9.8  -4.30719   TTCTGTTAGAAGAAA            TTCCAGTG TTGGG CACTGGAA            AAACTAATTACCCAG  93 126
D9T12_RS00555 NONE
D9T12_RS00550  138931 ..  138961 - -13.5  -5.86061   TTCTACCAAAAAAAA      TCGCCAAG-GTTTC ACGT GAAACACTTGGCGA       TTCTTCTATAGAATT 100 76
D9T12_RS00515  131804 ..  131819 -  -7.6  -4.07885   TAGTTGTTTGGAAAA              GGTTTC ACGT GAAACC               TTTTGTATTTTCACA  76 65
D9T12_RS00495  125893 ..  125908 -  -7.5  -5.96894   ATCTAAATAAAAAAA              GGCGC ATAATG GCGCC               TTTTTTATTGCTAAG 100 61
D9T12_RS00490  124128 ..  124139 -  -2.2   -2.8733   CTGGCTAGAAAATAG                TCGG ATTC CCAA                 AAGTAATCGCTTTTA  41 480
D9T12_RS00470  119900 ..  119920 -  -8.3  -3.11162   ACGGAATAAAGTACA            GCCCAGT ATAGCGA ACTGGGC            TTCAAAATTCATAGA  67 69
D9T12_RS00465 NONE
D9T12_RS00460  118546 ..  118561 -  -6.2  -3.86202   GCGTATGAGATGAAA              TGTTTC ACGT GAAACA               CATAGGGTGAAACTT  65 42
D9T12_RS00455  117005 ..  117021 -  -3.7  -4.77173   TGTTCAGAAAACAAA              CTCAATT CTT AGTTGAG              TAATTAGCTCTCAAG  69 29
D9T12_RS00410  109425 ..  109436 -  -4.4  -2.72364   ATGAGGAAGTATAAC                CTGT CAGC ACAG                 CTTGCAAGATAGATA  47 111
D9T12_RS00405 NONE
D9T12_RS00400  106831 ..  106858 -  -2.2  -2.61582   TATGGGATTTACAAG        GTTATTCAAGCAT TGA AT-CTTGAATAAA        GTTTTGACCGGCCGG  40 57
D9T12_RS00395 NONE
D9T12_RS00390 NONE
D9T12_RS00385 NONE
D9T12_RS00380  103013 ..  103033 -  -3.3  -2.79239   TGACACCAAAAGTTA            GCGCAAT AACTAAA ATTGCAC            GAATGGTATTGAAGG  44 73
D9T12_RS00375  102320 ..  102342 -  -2.8  -4.37658   AATTTTTTTAGAAAA           TTTAAGTTAT AAA ATTACTCAAA           AAATTATTTAAAAAA  60 379
D9T12_RS00365 NONE
D9T12_RS00360   98720 ..   98731 -    -3  -3.30513   GAAATAAATATTGAA                TTTG TGCA CAAA                 GTTCAGATTTCAGCC  47 504
D9T12_RS00350   94561 ..   94577 - -13.7  -5.75538   TTTAAAAAATAAAAA              GCCCGCA GAG TGCGGGC              TAAAAAGTAAAGGTG 100 51
D9T12_RS00345   92567 ..   92583 - -10.1  -5.69473   TACAGGACAAAAAAA              GCCCGCA AAA TACGGGC              TTAAAAGTGGTTTTA 100 56
D9T12_RS00320 NONE
        nhaA   83809 ..   83836 -  -4.8  -5.52096   AAAGCTAACAAAAAA        CGCTCC-AATCTC ATT GAGAAAAGGAGCG        TTTACTTTTTTAGAA  88 67
D9T12_RS00300   80900 ..   80914 -  -8.6  -3.41222   GCTGAATGTTAAATA               GAATGC ACC GCATTC               CCAATAAACTATTCA  73 56
D9T12_RS00275   74281 ..   74319 - -16.9  -3.54129   CAGAGGTTCCCTAAA   CTACCGGCCGGTAAGAA TTCAT TTGTTACCGGCCGGTAA   ACCTTTAAACACTTT 100 42
D9T12_RS00255 NONE
D9T12_RS00250   63792 ..   63835 -  -7.6  -3.57792   TCACCGATGCTGAAA TTGCCGCAAT-CATGGGCCAT GAA ATGGCGCATGCATTACGAGAA CACTCGCGCGAACGC  70 419
D9T12_RS00235 NONE
D9T12_RS00230   61020 ..   61037 -  -2.8  -2.84051   TCATTTCTATCAAAC             CTAAAT GTTCTA ATTTAG              TCTAATAAACAAAAA  42 75
D9T12_RS00225   60363 ..   60376 -  -4.5  -4.07568   TCCTTCTCGTTAAAA               GGACA GAAT CGTCC                ATATAACTTTACGAC  61 109
D9T12_RS00220   59674 ..   59711 - -10.2  -4.61527   AAAAGCTTGTAAAAA   CTCAATATTATTACTT TTTATT AAGCAATAACATTGAG    TAAAGACGCATTTAC  91 37
D9T12_RS00215 NONE
D9T12_RS00210   58268 ..   58279 -    -3  -4.57341   AACGTTTTTTAAAAA                TGAT ATTC ATCA                 ACCCTACACACACCT  62 39
D9T12_RS00205   54398 ..   54415 -  -8.5  -4.21471   ATTGCAAAACAAGAA             CTTTACC GGCC GGTAAAG              TTTAAAACGTTATGA  81 423
        glmS NONE
        rfbA NONE
        rfbC NONE
        rfbD NONE
D9T12_RS00150   42837 ..   42873 -  -2.8  -4.32669   AATGCGACAAAACAA   GCGAGAGCGTTGAGGAG ATTG CTTCGCTACGCGC-CGC    GTAGCAAGTGCCCTT  57 96
D9T12_RS00140   40288 ..   40300 -  -3.5  -2.85565   ATATTTGAAATATCA                TTTTT ATA AAAAA                CAACCACTAAAGCTC  44 32
D9T12_RS00135 NONE
D9T12_RS00130 NONE
D9T12_RS00125 NONE
D9T12_RS00120 NONE
D9T12_RS00115   34042 ..   34056 -  -4.3  -3.96298   GATGTAGCAAGTAAA               CAGTA AGGCA TACTG               CTTGAATGAGCAGTA  59 59
D9T12_RS00105 NONE
D9T12_RS00100   29849 ..   29868 -  -5.2  -3.57561   TTCCAAGTGTTGAAA            TTAATATT TGCA AATATTAA             AGACCCATATACTTG  57 146
D9T12_RS00095   25016 ..   25039 - -18.2   -5.4505   GCCCTTAAGAAAAAA          CCCTGCTCGG CAAG CCGAGCAGGG           TTTTCGCACTTACCA 100 86
D9T12_RS00090   24469 ..   24487 -    -3  -3.56216   AAGCAATCCACACAA             CACAGTCA TTG CGTCTGCG             AGCACCCCAAGGGCA  48 85
D9T12_RS00085 NONE
D9T12_RS00080   20866 ..   20877 -  -4.4  -3.36398   ATTCAGACATAAAAT                TGAG CAAA CTCA                 CTAGCACATAATTTT  53 101
D9T12_RS00075 NONE
D9T12_RS00070 NONE
D9T12_RS00065 NONE
D9T12_RS00060   15444 ..   15461 - -12.7  -5.04597   ATTTATACACAAAAA             TGCCCGC TAAA GCGGGCA              TAACTGAAAAGTCAT 100 71
D9T12_RS00050 NONE
D9T12_RS00045   10809 ..   10827 -  -8.2  -3.06915   ACGCATTTTAGGGAA             CCTCTGAT CGA ATCAGAGA             TTCCTTAACTTATCG  67 35
D9T12_RS00040   10021 ..   10049 -  -3.9  -4.37658   AATTGTTGCAGAAAA        TGCCAAAACCTAT CCT AAAGGTTTTGAGA        TTCAGCAAGATAAAA  63 109
D9T12_RS00035    8656 ..    8684 -   -14  -5.24129   GGCTGGCATAAAAAA       GCCCCCGCAAGAA TGAT TTCTT-CGGGGGC        TTTTTTCATTCAGCA 100 57
