locus-tag class description TCR_RS00005 PF11638 DnaA N-terminal domain TCR_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix TCR_RS00005 PF00308 Bacterial dnaA protein TCR_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain TCR_RS00010 PF02767 DNA polymerase III beta subunit, central domain TCR_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain TCR_RS00015 PF02463 RecF/RecN/SMC N terminal domain TCR_RS00020 PF00072 Response regulator receiver domain TCR_RS00020 PF00486 Transcriptional regulatory protein, C terminal TCR_RS00040 PF00873 AcrB/AcrD/AcrF family TCR_RS00060 PF00204 DNA gyrase B TCR_RS00060 PF00986 DNA gyrase B subunit, carboxyl terminus TCR_RS00060 PF18053 DNA gyrase B subunit insert domain TCR_RS00060 PF01751 Toprim domain TCR_RS00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS00065 PF00485 Phosphoribulokinase / Uridine kinase family TCR_RS00080 PF01479 S4 domain TCR_RS00085 PF01218 Coproporphyrinogen III oxidase TCR_RS00095 PF01300 Telomere recombination TCR_RS00105 PF08448 PAS fold TCR_RS00105 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS00115 PF01810 LysE type translocator TCR_RS00120 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TCR_RS00120 PF00753 Metallo-beta-lactamase superfamily TCR_RS00120 PF10996 Beta-Casp domain TCR_RS00140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS00140 PF00672 HAMP domain TCR_RS00140 PF02203 Tar ligand binding domain homologue TCR_RS00145 PF12792 CSS motif domain associated with EAL TCR_RS00145 PF00563 EAL domain TCR_RS00150 PF00939 Sodium:sulfate symporter transmembrane region TCR_RS00165 PF00005 ABC transporter TCR_RS00175 PF00528 Binding-protein-dependent transport system inner membrane component TCR_RS00185 PF00158 Sigma-54 interaction domain TCR_RS00185 PF01590 GAF domain TCR_RS00185 PF02954 Bacterial regulatory protein, Fis family TCR_RS00190 PF03193 RsgA GTPase TCR_RS00195 PF18113 Rubredoxin binding C-terminal domain TCR_RS00195 PF07992 Pyridine nucleotide-disulphide oxidoreductase TCR_RS00200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TCR_RS00200 PF02770 Acyl-CoA dehydrogenase, middle domain TCR_RS00200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TCR_RS00210 PF02560 Cyanate lyase C-terminal domain TCR_RS00225 PF01636 Phosphotransferase enzyme family TCR_RS00230 PF01367 5'-3' exonuclease, C-terminal SAM fold TCR_RS00230 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TCR_RS00230 PF00476 DNA polymerase family A TCR_RS00230 PF01612 3'-5' exonuclease TCR_RS00245 PF01926 50S ribosome-binding GTPase TCR_RS00250 PF05140 ResB-like family TCR_RS00255 PF01578 Cytochrome C assembly protein TCR_RS00260 PF01323 DSBA-like thioredoxin domain TCR_RS00265 PF00205 Thiamine pyrophosphate enzyme, central domain TCR_RS00265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TCR_RS00265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TCR_RS00275 PF00881 Nitroreductase family TCR_RS00280 PF03466 LysR substrate binding domain TCR_RS00280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TCR_RS00290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TCR_RS00290 PF00529 HlyD membrane-fusion protein of T1SS TCR_RS00295 PF00873 AcrB/AcrD/AcrF family TCR_RS00300 PF03334 Na+/H+ antiporter subunit TCR_RS00305 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) TCR_RS00310 PF01899 Na+/H+ ion antiporter subunit TCR_RS00315 PF00361 Proton-conducting membrane transporter TCR_RS00320 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TCR_RS00325 PF13244 Domain of unknown function (DUF4040) TCR_RS00325 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter TCR_RS00325 PF00361 Proton-conducting membrane transporter TCR_RS00325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TCR_RS00330 PF02690 Na+/Pi-cotransporter TCR_RS00345 PF01894 Uncharacterised protein family UPF0047 TCR_RS00350 PF00072 Response regulator receiver domain TCR_RS00350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS00350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TCR_RS00350 PF01627 Hpt domain TCR_RS00350 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS00350 PF00672 HAMP domain TCR_RS00355 PF01432 Peptidase family M3 TCR_RS00365 PF07690 Major Facilitator Superfamily TCR_RS00370 PF01553 Acyltransferase TCR_RS00370 PF00501 AMP-binding enzyme TCR_RS00380 PF13519 von Willebrand factor type A domain TCR_RS00380 PF07584 Aerotolerance regulator N-terminal TCR_RS00395 PF01882 Protein of unknown function DUF58 TCR_RS00400 PF07726 ATPase family associated with various cellular activities (AAA) TCR_RS00400 PF17863 AAA lid domain TCR_RS00405 PF02203 Tar ligand binding domain homologue TCR_RS00405 PF00672 HAMP domain TCR_RS00405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS00410 PF08003 Protein of unknown function (DUF1698) TCR_RS00415 PF13649 Methyltransferase domain TCR_RS00420 PF01464 Transglycosylase SLT domain TCR_RS00420 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain TCR_RS00430 PF07693 KAP family P-loop domain TCR_RS00435 PF13847 Methyltransferase domain TCR_RS00465 PF13847 Methyltransferase domain TCR_RS00470 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS00470 PF08448 PAS fold TCR_RS00485 PF00753 Metallo-beta-lactamase superfamily TCR_RS00490 PF07690 Major Facilitator Superfamily TCR_RS00495 PF17863 AAA lid domain TCR_RS00495 PF07726 ATPase family associated with various cellular activities (AAA) TCR_RS00500 PF01882 Protein of unknown function DUF58 TCR_RS00510 PF00092 von Willebrand factor type A domain TCR_RS00530 PF00085 Thioredoxin TCR_RS00550 PF00069 Protein kinase domain TCR_RS00560 PF00156 Phosphoribosyl transferase domain TCR_RS00565 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS00570 PF14698 Argininosuccinate lyase C-terminal TCR_RS00570 PF00206 Lyase TCR_RS00580 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TCR_RS00580 PF03900 Porphobilinogen deaminase, C-terminal domain TCR_RS00605 PF04055 Radical SAM superfamily TCR_RS00605 PF06969 HemN C-terminal domain TCR_RS00615 PF02390 Putative methyltransferase TCR_RS00620 PF14815 NUDIX domain TCR_RS00620 PF00730 HhH-GPD superfamily base excision DNA repair protein TCR_RS00625 PF04362 Bacterial Fe(2+) trafficking TCR_RS00630 PF00563 EAL domain TCR_RS00630 PF08668 HDOD domain TCR_RS00635 PF01208 Uroporphyrinogen decarboxylase (URO-D) TCR_RS00645 PF01197 Ribosomal protein L31 TCR_RS00650 PF07497 Rho termination factor, RNA-binding domain TCR_RS00650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TCR_RS00650 PF07498 Rho termination factor, N-terminal domain TCR_RS00655 PF00085 Thioredoxin TCR_RS00660 PF13361 UvrD-like helicase C-terminal domain TCR_RS00660 PF00580 UvrD/REP helicase N-terminal domain TCR_RS00665 PF00005 ABC transporter TCR_RS00670 PF01266 FAD dependent oxidoreductase TCR_RS00670 PF05430 S-adenosyl-L-methionine-dependent methyltransferase TCR_RS00685 PF01966 HD domain TCR_RS00690 PF10996 Beta-Casp domain TCR_RS00690 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TCR_RS00690 PF00753 Metallo-beta-lactamase superfamily TCR_RS00695 PF00672 HAMP domain TCR_RS00695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS00695 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS00695 PF01627 Hpt domain TCR_RS00695 PF00072 Response regulator receiver domain TCR_RS00695 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TCR_RS00715 PF00462 Glutaredoxin TCR_RS00715 PF08534 Redoxin TCR_RS00720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TCR_RS00720 PF07992 Pyridine nucleotide-disulphide oxidoreductase TCR_RS00730 PF13344 Haloacid dehalogenase-like hydrolase TCR_RS00730 PF00293 NUDIX domain TCR_RS00735 PF08543 Phosphomethylpyrimidine kinase TCR_RS00740 PF02581 Thiamine monophosphate synthase TCR_RS00745 PF05690 Thiazole biosynthesis protein ThiG TCR_RS00755 PF01266 FAD dependent oxidoreductase TCR_RS00760 PF01964 Radical SAM ThiC family TCR_RS00760 PF13667 ThiC-associated domain TCR_RS00775 PF00132 Bacterial transferase hexapeptide (six repeats) TCR_RS00780 PF00563 EAL domain TCR_RS00780 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS00780 PF03707 Bacterial signalling protein N terminal repeat TCR_RS00785 PF01488 Shikimate / quinate 5-dehydrogenase TCR_RS00785 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TCR_RS00785 PF08501 Shikimate dehydrogenase substrate binding domain TCR_RS00790 PF00490 Delta-aminolevulinic acid dehydratase TCR_RS00805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TCR_RS00805 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP TCR_RS00810 PF04055 Radical SAM superfamily TCR_RS00810 PF06463 Molybdenum Cofactor Synthesis C TCR_RS00815 PF02597 ThiS family TCR_RS00820 PF02391 MoaE protein TCR_RS00825 PF03454 MoeA C-terminal region (domain IV) TCR_RS00825 PF03453 MoeA N-terminal region (domain I and II) TCR_RS00825 PF00994 Probable molybdopterin binding domain TCR_RS00830 PF01967 MoaC family TCR_RS00850 PF03707 Bacterial signalling protein N terminal repeat TCR_RS00850 PF00563 EAL domain TCR_RS00850 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS00855 PF02580 D-Tyr-tRNA(Tyr) deacylase TCR_RS00860 PF00561 alpha/beta hydrolase fold TCR_RS00865 PF00679 Elongation factor G C-terminus TCR_RS00865 PF03144 Elongation factor Tu domain 2 TCR_RS00865 PF00009 Elongation factor Tu GTP binding domain TCR_RS00880 PF02310 B12 binding domain TCR_RS00880 PF02574 Homocysteine S-methyltransferase TCR_RS00880 PF02607 B12 binding domain TCR_RS00880 PF00809 Pterin binding enzyme TCR_RS00880 PF02965 Vitamin B12 dependent methionine synthase, activation domain TCR_RS00885 PF05958 tRNA (Uracil-5-)-methyltransferase TCR_RS00890 PF01925 Sulfite exporter TauE/SafE TCR_RS00905 PF00210 Ferritin-like domain TCR_RS00910 PF10615 Protein of unknown function (DUF2470) TCR_RS00910 PF01243 Pyridoxamine 5'-phosphate oxidase TCR_RS00915 PF01032 FecCD transport family TCR_RS00920 PF00005 ABC transporter TCR_RS00925 PF03475 3-alpha domain TCR_RS00925 PF03473 MOSC domain TCR_RS00930 PF01171 PP-loop family TCR_RS00935 PF03279 Bacterial lipid A biosynthesis acyltransferase TCR_RS00940 PF02834 LigT like Phosphoesterase TCR_RS00950 PF02386 Cation transport protein TCR_RS00955 PF02254 TrkA-N domain TCR_RS00955 PF02080 TrkA-C domain TCR_RS00960 PF02954 Bacterial regulatory protein, Fis family TCR_RS00960 PF00158 Sigma-54 interaction domain TCR_RS00960 PF00072 Response regulator receiver domain TCR_RS00965 PF00989 PAS fold TCR_RS00965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS00965 PF00672 HAMP domain TCR_RS00965 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS00975 PF01029 NusB family TCR_RS00975 PF01189 16S rRNA methyltransferase RsmB/F TCR_RS00980 PF02911 Formyl transferase, C-terminal domain TCR_RS00980 PF00551 Formyl transferase TCR_RS00985 PF01327 Polypeptide deformylase TCR_RS00990 PF17782 DprA winged helix domain TCR_RS00990 PF02481 DNA recombination-mediator protein A TCR_RS00995 PF00072 Response regulator receiver domain TCR_RS01000 PF01751 Toprim domain TCR_RS01000 PF01131 DNA topoisomerase TCR_RS01000 PF13368 Topoisomerase C-terminal repeat TCR_RS01005 PF13426 PAS domain TCR_RS01005 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS01005 PF00563 EAL domain TCR_RS01010 PF03485 Arginyl tRNA synthetase N terminal domain TCR_RS01010 PF05746 DALR anticodon binding domain TCR_RS01010 PF00750 tRNA synthetases class I (R) TCR_RS01020 PF07694 5TMR of 5TMR-LYT TCR_RS01020 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS01025 PF04380 Membrane fusogenic activity TCR_RS01030 PF01078 Magnesium chelatase, subunit ChlI TCR_RS01030 PF13335 Magnesium chelatase, subunit ChlI C-terminal TCR_RS01045 PF00196 Bacterial regulatory proteins, luxR family TCR_RS01055 PF00664 ABC transporter transmembrane region TCR_RS01055 PF03412 Peptidase C39 family TCR_RS01055 PF00005 ABC transporter TCR_RS01060 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS01070 PF00691 OmpA family TCR_RS01075 PF00465 Iron-containing alcohol dehydrogenase TCR_RS01080 PF00580 UvrD/REP helicase N-terminal domain TCR_RS01080 PF13361 UvrD-like helicase C-terminal domain TCR_RS01085 PF05175 Methyltransferase small domain TCR_RS01100 PF01142 tRNA pseudouridine synthase D (TruD) TCR_RS01105 PF01502 Phosphoribosyl-AMP cyclohydrolase TCR_RS01115 PF01546 Peptidase family M20/M25/M40 TCR_RS01115 PF07687 Peptidase dimerisation domain TCR_RS01120 PF00202 Aminotransferase class-III TCR_RS01125 PF01321 Creatinase/Prolidase N-terminal domain TCR_RS01125 PF00557 Metallopeptidase family M24 TCR_RS01130 PF00171 Aldehyde dehydrogenase family TCR_RS01150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS01150 PF13188 PAS domain TCR_RS01150 PF00072 Response regulator receiver domain TCR_RS01150 PF08448 PAS fold TCR_RS01150 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS01155 PF00563 EAL domain TCR_RS01155 PF01590 GAF domain TCR_RS01155 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS01155 PF00360 Phytochrome region TCR_RS01175 PF00111 2Fe-2S iron-sulfur cluster binding domain TCR_RS01175 PF01799 [2Fe-2S] binding domain TCR_RS01205 PF02777 Iron/manganese superoxide dismutases, C-terminal domain TCR_RS01205 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain TCR_RS01210 PF05166 YcgL domain TCR_RS01220 PF12627 Probable RNA and SrmB- binding site of polymerase A TCR_RS01220 PF01966 HD domain TCR_RS01220 PF01743 Poly A polymerase head domain TCR_RS01225 PF16916 Dimerisation domain of Zinc Transporter TCR_RS01225 PF01545 Cation efflux family TCR_RS01235 PF00873 AcrB/AcrD/AcrF family TCR_RS01240 PF02780 Transketolase, C-terminal domain TCR_RS01240 PF02779 Transketolase, pyrimidine binding domain TCR_RS01240 PF00456 Transketolase, thiamine diphosphate binding domain TCR_RS01245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TCR_RS01245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TCR_RS01250 PF00162 Phosphoglycerate kinase TCR_RS01255 PF02887 Pyruvate kinase, alpha/beta domain TCR_RS01255 PF00224 Pyruvate kinase, barrel domain TCR_RS01260 PF01116 Fructose-bisphosphate aldolase class-II TCR_RS01270 PF00263 Bacterial type II and III secretion system protein TCR_RS01270 PF03958 Bacterial type II/III secretion system short domain TCR_RS01275 PF00437 Type II/IV secretion system protein TCR_RS01280 PF00482 Type II secretion system (T2SS), protein F TCR_RS01285 PF07963 Prokaryotic N-terminal methylation motif TCR_RS01285 PF08334 Type II secretion system (T2SS), protein G TCR_RS01300 PF11612 Type II secretion system (T2SS), protein J TCR_RS01300 PF07963 Prokaryotic N-terminal methylation motif TCR_RS01305 PF03934 Type II secretion system (T2SS), protein K TCR_RS01310 PF12693 GspL periplasmic domain TCR_RS01310 PF05134 Type II secretion system (T2SS), protein L TCR_RS01330 PF01259 SAICAR synthetase TCR_RS01340 PF00834 Ribulose-phosphate 3 epimerase family TCR_RS01345 PF13419 Haloacid dehalogenase-like hydrolase TCR_RS01350 PF00425 chorismate binding enzyme TCR_RS01350 PF04715 Anthranilate synthase component I, N terminal region TCR_RS01355 PF00117 Glutamine amidotransferase class-I TCR_RS01360 PF00591 Glycosyl transferase family, a/b domain TCR_RS01360 PF02885 Glycosyl transferase family, helical bundle domain TCR_RS01365 PF00218 Indole-3-glycerol phosphate synthase TCR_RS01380 PF02675 S-adenosylmethionine decarboxylase TCR_RS01385 PF17284 Spermidine synthase tetramerisation domain TCR_RS01390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TCR_RS01390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TCR_RS01395 PF02566 OsmC-like protein TCR_RS01405 PF04055 Radical SAM superfamily TCR_RS01405 PF00202 Aminotransferase class-III TCR_RS01405 PF06968 Biotin and Thiamin Synthesis associated domain TCR_RS01415 PF00849 RNA pseudouridylate synthase TCR_RS01440 PF00009 Elongation factor Tu GTP binding domain TCR_RS01440 PF03144 Elongation factor Tu domain 2 TCR_RS01440 PF03143 Elongation factor Tu C-terminal domain TCR_RS01450 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TCR_RS01455 PF02357 Transcription termination factor nusG TCR_RS01455 PF00467 KOW motif TCR_RS01460 PF00298 Ribosomal protein L11, RNA binding domain TCR_RS01460 PF03946 Ribosomal protein L11, N-terminal domain TCR_RS01465 PF00687 Ribosomal protein L1p/L10e family TCR_RS01470 PF00466 Ribosomal protein L10 TCR_RS01475 PF16320 Ribosomal protein L7/L12 dimerisation domain TCR_RS01475 PF00542 Ribosomal protein L7/L12 C-terminal domain TCR_RS01480 PF04560 RNA polymerase Rpb2, domain 7 TCR_RS01480 PF00562 RNA polymerase Rpb2, domain 6 TCR_RS01480 PF04565 RNA polymerase Rpb2, domain 3 TCR_RS01480 PF04563 RNA polymerase beta subunit TCR_RS01480 PF04561 RNA polymerase Rpb2, domain 2 TCR_RS01480 PF10385 RNA polymerase beta subunit external 1 domain TCR_RS01485 PF04998 RNA polymerase Rpb1, domain 5 TCR_RS01485 PF05000 RNA polymerase Rpb1, domain 4 TCR_RS01485 PF04997 RNA polymerase Rpb1, domain 1 TCR_RS01485 PF00623 RNA polymerase Rpb1, domain 2 TCR_RS01485 PF04983 RNA polymerase Rpb1, domain 3 TCR_RS01490 PF00164 Ribosomal protein S12/S23 TCR_RS01495 PF00177 Ribosomal protein S7p/S5e TCR_RS01500 PF00679 Elongation factor G C-terminus TCR_RS01500 PF03144 Elongation factor Tu domain 2 TCR_RS01500 PF00009 Elongation factor Tu GTP binding domain TCR_RS01500 PF03764 Elongation factor G, domain IV TCR_RS01500 PF14492 Elongation Factor G, domain II TCR_RS01505 PF00009 Elongation factor Tu GTP binding domain TCR_RS01505 PF03144 Elongation factor Tu domain 2 TCR_RS01505 PF03143 Elongation factor Tu C-terminal domain TCR_RS01510 PF00338 Ribosomal protein S10p/S20e TCR_RS01515 PF00297 Ribosomal protein L3 TCR_RS01520 PF00573 Ribosomal protein L4/L1 family TCR_RS01525 PF00276 Ribosomal protein L23 TCR_RS01530 PF03947 Ribosomal Proteins L2, C-terminal domain TCR_RS01530 PF00181 Ribosomal Proteins L2, RNA binding domain TCR_RS01535 PF00203 Ribosomal protein S19 TCR_RS01540 PF00237 Ribosomal protein L22p/L17e TCR_RS01545 PF07650 KH domain TCR_RS01545 PF00189 Ribosomal protein S3, C-terminal domain TCR_RS01550 PF00252 Ribosomal protein L16p/L10e TCR_RS01555 PF00831 Ribosomal L29 protein TCR_RS01560 PF00366 Ribosomal protein S17 TCR_RS01565 PF00238 Ribosomal protein L14p/L23e TCR_RS01570 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TCR_RS01570 PF00467 KOW motif TCR_RS01575 PF00673 ribosomal L5P family C-terminus TCR_RS01575 PF00281 Ribosomal protein L5 TCR_RS01580 PF00253 Ribosomal protein S14p/S29e TCR_RS01585 PF00410 Ribosomal protein S8 TCR_RS01590 PF00347 Ribosomal protein L6 TCR_RS01595 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TCR_RS01600 PF00333 Ribosomal protein S5, N-terminal domain TCR_RS01600 PF03719 Ribosomal protein S5, C-terminal domain TCR_RS01605 PF00327 Ribosomal protein L30p/L7e TCR_RS01610 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TCR_RS01615 PF00344 SecY translocase TCR_RS01620 PF00416 Ribosomal protein S13/S18 TCR_RS01625 PF00411 Ribosomal protein S11 TCR_RS01630 PF01479 S4 domain TCR_RS01630 PF00163 Ribosomal protein S4/S9 N-terminal domain TCR_RS01635 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TCR_RS01635 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TCR_RS01635 PF01000 RNA polymerase Rpb3/RpoA insert domain TCR_RS01640 PF01196 Ribosomal protein L17 TCR_RS01645 PF01026 TatD related DNase TCR_RS01650 PF00899 ThiF family TCR_RS01660 PF17755 UvrA DNA-binding domain TCR_RS01660 PF17760 UvrA interaction domain TCR_RS01670 PF07690 Major Facilitator Superfamily TCR_RS01675 PF00436 Single-strand binding protein family TCR_RS01680 PF00589 Phage integrase family TCR_RS01680 PF02899 Phage integrase, N-terminal SAM-like domain TCR_RS01700 PF02384 N-6 DNA Methylase TCR_RS01705 PF01420 Type I restriction modification DNA specificity domain TCR_RS01710 PF11867 Domain of unknown function (DUF3387) TCR_RS01710 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TCR_RS01710 PF18766 SWI2/SNF2 ATPase TCR_RS01730 PF00144 Beta-lactamase TCR_RS01740 PF00348 Polyprenyl synthetase TCR_RS01745 PF00829 Ribosomal prokaryotic L21 protein TCR_RS01750 PF01016 Ribosomal L27 protein TCR_RS01755 PF01018 GTP1/OBG TCR_RS01755 PF01926 50S ribosome-binding GTPase TCR_RS01760 PF01472 PUA domain TCR_RS01760 PF00696 Amino acid kinase family TCR_RS01765 PF00166 Chaperonin 10 Kd subunit TCR_RS01770 PF00118 TCP-1/cpn60 chaperonin family TCR_RS01780 PF02774 Semialdehyde dehydrogenase, dimerisation domain TCR_RS01780 PF01118 Semialdehyde dehydrogenase, NAD binding domain TCR_RS01785 PF01521 Iron-sulphur cluster biosynthesis TCR_RS01790 PF00285 Citrate synthase, C-terminal domain TCR_RS01795 PF03702 Anhydro-N-acetylmuramic acid kinase TCR_RS01800 PF01551 Peptidase family M23 TCR_RS01800 PF04225 Opacity-associated protein A LysM-like domain TCR_RS01805 PF01206 Sulfurtransferase TusA TCR_RS01810 PF02091 Glycyl-tRNA synthetase alpha subunit TCR_RS01815 PF02092 Glycyl-tRNA synthetase beta subunit TCR_RS01815 PF05746 DALR anticodon binding domain TCR_RS01830 PF01618 MotA/TolQ/ExbB proton channel family TCR_RS01835 PF13677 Membrane MotB of proton-channel complex MotA/MotB TCR_RS01835 PF00691 OmpA family TCR_RS01840 PF04972 BON domain TCR_RS01840 PF00691 OmpA family TCR_RS01845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS01845 PF02203 Tar ligand binding domain homologue TCR_RS01845 PF00672 HAMP domain TCR_RS01850 PF03167 Uracil DNA glycosylase superfamily TCR_RS01855 PF01243 Pyridoxamine 5'-phosphate oxidase TCR_RS01855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region TCR_RS01860 PF00204 DNA gyrase B TCR_RS01860 PF00986 DNA gyrase B subunit, carboxyl terminus TCR_RS01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS01860 PF01751 Toprim domain TCR_RS01870 PF13676 TIR domain TCR_RS01935 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS01935 PF08448 PAS fold TCR_RS01940 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS01940 PF17151 Periplasmic sensor domain TCR_RS01960 PF00521 DNA gyrase/topoisomerase IV, subunit A TCR_RS01960 PF03989 DNA gyrase C-terminal domain, beta-propeller TCR_RS01965 PF01618 MotA/TolQ/ExbB proton channel family TCR_RS01970 PF00691 OmpA family TCR_RS01970 PF13677 Membrane MotB of proton-channel complex MotA/MotB TCR_RS01975 PF00899 ThiF family TCR_RS01980 PF13847 Methyltransferase domain TCR_RS01980 PF17827 PrmC N-terminal domain TCR_RS01985 PF00472 RF-1 domain TCR_RS01985 PF03462 PCRF domain TCR_RS01990 PF01488 Shikimate / quinate 5-dehydrogenase TCR_RS01990 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TCR_RS01990 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TCR_RS02005 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TCR_RS02005 PF14572 Phosphoribosyl synthetase-associated domain TCR_RS02010 PF14693 Ribosomal protein TL5, C-terminal domain TCR_RS02010 PF01386 Ribosomal L25p family TCR_RS02015 PF01195 Peptidyl-tRNA hydrolase TCR_RS02020 PF01926 50S ribosome-binding GTPase TCR_RS02020 PF06071 Protein of unknown function (DUF933) TCR_RS02035 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS02035 PF00563 EAL domain TCR_RS02035 PF03707 Bacterial signalling protein N terminal repeat TCR_RS02045 PF00860 Permease family TCR_RS02050 PF03109 ABC1 family TCR_RS02060 PF01209 ubiE/COQ5 methyltransferase family TCR_RS02070 PF07724 AAA domain (Cdc48 subfamily) TCR_RS02070 PF00004 ATPase family associated with various cellular activities (AAA) TCR_RS02075 PF01678 Diaminopimelate epimerase TCR_RS02095 PF02899 Phage integrase, N-terminal SAM-like domain TCR_RS02095 PF00589 Phage integrase family TCR_RS02100 PF00227 Proteasome subunit TCR_RS02110 PF01613 Flavin reductase like domain TCR_RS02120 PF00004 ATPase family associated with various cellular activities (AAA) TCR_RS02120 PF17871 AAA lid domain TCR_RS02120 PF10431 C-terminal, D2-small domain, of ClpB protein TCR_RS02120 PF07724 AAA domain (Cdc48 subfamily) TCR_RS02120 PF02861 Clp amino terminal domain, pathogenicity island component TCR_RS02160 PF00484 Carbonic anhydrase TCR_RS02165 PF00092 von Willebrand factor type A domain TCR_RS02170 PF07728 AAA domain (dynein-related subfamily) TCR_RS02170 PF08406 CbbQ/NirQ/NorQ C-terminal TCR_RS02175 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TCR_RS02175 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TCR_RS02180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TCR_RS02180 PF03466 LysR substrate binding domain TCR_RS02185 PF03466 LysR substrate binding domain TCR_RS02185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TCR_RS02190 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TCR_RS02190 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TCR_RS02195 PF00101 Ribulose bisphosphate carboxylase, small chain TCR_RS02200 PF07728 AAA domain (dynein-related subfamily) TCR_RS02200 PF08406 CbbQ/NirQ/NorQ C-terminal TCR_RS02205 PF00092 von Willebrand factor type A domain TCR_RS02220 PF00005 ABC transporter TCR_RS02225 PF02687 FtsX-like permease family TCR_RS02225 PF12704 MacB-like periplasmic core domain TCR_RS02230 PF12704 MacB-like periplasmic core domain TCR_RS02230 PF00005 ABC transporter TCR_RS02230 PF02687 FtsX-like permease family TCR_RS02245 PF02844 Phosphoribosylglycinamide synthetase, N domain TCR_RS02245 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TCR_RS02245 PF02843 Phosphoribosylglycinamide synthetase, C domain TCR_RS02250 PF02142 MGS-like domain TCR_RS02250 PF01808 AICARFT/IMPCHase bienzyme TCR_RS02255 PF02954 Bacterial regulatory protein, Fis family TCR_RS02260 PF01207 Dihydrouridine synthase (Dus) TCR_RS02270 PF00289 Biotin carboxylase, N-terminal domain TCR_RS02270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TCR_RS02270 PF02785 Biotin carboxylase C-terminal domain TCR_RS02275 PF00364 Biotin-requiring enzyme TCR_RS02280 PF01220 Dehydroquinase class II TCR_RS02285 PF02683 Cytochrome C biogenesis protein transmembrane region TCR_RS02285 PF11412 Disulphide bond corrector protein DsbC TCR_RS02290 PF04186 FxsA cytoplasmic membrane protein TCR_RS02305 PF03625 Domain of unknown function DUF302 TCR_RS02310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TCR_RS02310 PF11890 Domain of unknown function (DUF3410) TCR_RS02310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TCR_RS02330 PF00873 AcrB/AcrD/AcrF family TCR_RS02335 PF02492 CobW/HypB/UreG, nucleotide-binding domain TCR_RS02335 PF07683 Cobalamin synthesis protein cobW C-terminal domain TCR_RS02340 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS02355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TCR_RS02355 PF03459 TOBE domain TCR_RS02360 PF00572 Ribosomal protein L13 TCR_RS02365 PF00380 Ribosomal protein S9/S16 TCR_RS02370 PF00317 Ribonucleotide reductase, all-alpha domain TCR_RS02370 PF02867 Ribonucleotide reductase, barrel domain TCR_RS02370 PF03477 ATP cone domain TCR_RS02375 PF00267 Gram-negative porin TCR_RS02405 PF02954 Bacterial regulatory protein, Fis family TCR_RS02405 PF00158 Sigma-54 interaction domain TCR_RS02405 PF00072 Response regulator receiver domain TCR_RS02410 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS02410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS02415 PF07963 Prokaryotic N-terminal methylation motif TCR_RS02415 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor TCR_RS02420 PF01938 TRAM domain TCR_RS02420 PF00919 Uncharacterized protein family UPF0004 TCR_RS02420 PF04055 Radical SAM superfamily TCR_RS02425 PF02562 PhoH-like protein TCR_RS02430 PF02130 Uncharacterized protein family UPF0054 TCR_RS02435 PF03471 Transporter associated domain TCR_RS02435 PF00571 CBS domain TCR_RS02440 PF00795 Carbon-nitrogen hydrolase TCR_RS02450 PF13603 Leucyl-tRNA synthetase, Domain 2 TCR_RS02450 PF00133 tRNA synthetases class I (I, L, M and V) TCR_RS02450 PF08264 Anticodon-binding domain of tRNA TCR_RS02465 PF00171 Aldehyde dehydrogenase family TCR_RS02475 PF01467 Cytidylyltransferase-like TCR_RS02485 PF02590 Predicted SPOUT methyltransferase TCR_RS02500 PF01734 Patatin-like phospholipase TCR_RS02505 PF02253 Phospholipase A1 TCR_RS02520 PF01649 Ribosomal protein S20 TCR_RS02525 PF03023 Lipid II flippase MurJ TCR_RS02530 PF01687 Riboflavin kinase TCR_RS02530 PF06574 FAD synthetase TCR_RS02535 PF08264 Anticodon-binding domain of tRNA TCR_RS02535 PF06827 Zinc finger found in FPG and IleRS TCR_RS02535 PF00133 tRNA synthetases class I (I, L, M and V) TCR_RS02540 PF01252 Signal peptidase (SPase) II TCR_RS02550 PF13406 Transglycosylase SLT domain TCR_RS02555 PF01170 Putative RNA methylase family UPF0020 TCR_RS02555 PF10672 S-adenosylmethionine-dependent methyltransferase TCR_RS02555 PF02926 THUMP domain TCR_RS02560 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS02565 PF06969 HemN C-terminal domain TCR_RS02565 PF04055 Radical SAM superfamily TCR_RS02570 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) TCR_RS02575 PF01380 SIS domain TCR_RS02575 PF00571 CBS domain TCR_RS02585 PF00294 pfkB family carbohydrate kinase TCR_RS02585 PF01467 Cytidylyltransferase-like TCR_RS02590 PF13580 SIS domain TCR_RS02595 PF02685 Glucokinase TCR_RS02600 PF00483 Nucleotidyl transferase TCR_RS02610 PF02446 4-alpha-glucanotransferase TCR_RS02615 PF02806 Alpha amylase, C-terminal all-beta domain TCR_RS02615 PF00128 Alpha amylase, catalytic domain TCR_RS02615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TCR_RS02620 PF08323 Starch synthase catalytic domain TCR_RS02620 PF00534 Glycosyl transferases group 1 TCR_RS02625 PF00343 Carbohydrate phosphorylase TCR_RS02635 PF01272 Transcription elongation factor, GreA/GreB, C-term TCR_RS02635 PF03449 Transcription elongation factor, N-terminal TCR_RS02650 PF00583 Acetyltransferase (GNAT) family TCR_RS02655 PF00202 Aminotransferase class-III TCR_RS02660 PF06339 Ectoine synthase TCR_RS02665 PF13840 ACT domain TCR_RS02665 PF00696 Amino acid kinase family TCR_RS02685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TCR_RS02695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TCR_RS02720 PF12169 DNA polymerase III subunits gamma and tau domain III TCR_RS02720 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding TCR_RS02720 PF12170 DNA polymerase III tau subunit V interacting with alpha TCR_RS02725 PF02575 YbaB/EbfC DNA-binding family TCR_RS02730 PF02132 RecR protein TCR_RS02730 PF13662 Toprim domain TCR_RS02735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TCR_RS02735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TCR_RS02740 PF00202 Aminotransferase class-III TCR_RS02745 PF01063 Amino-transferase class IV TCR_RS02755 PF03951 Glutamine synthetase, beta-Grasp domain TCR_RS02755 PF00120 Glutamine synthetase, catalytic domain TCR_RS02765 PF00528 Binding-protein-dependent transport system inner membrane component TCR_RS02770 PF00005 ABC transporter TCR_RS02775 PF01895 PhoU domain TCR_RS02780 PF00072 Response regulator receiver domain TCR_RS02780 PF00486 Transcriptional regulatory protein, C terminal TCR_RS02785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS02785 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS02785 PF00989 PAS fold TCR_RS02785 PF11808 Phosphate regulon sensor protein PhoR TCR_RS02790 PF01384 Phosphate transporter family TCR_RS02795 PF12849 PBP superfamily domain TCR_RS02800 PF00111 2Fe-2S iron-sulfur cluster binding domain TCR_RS02820 PF13472 GDSL-like Lipase/Acylhydrolase family TCR_RS02825 PF00005 ABC transporter TCR_RS02845 PF08447 PAS fold TCR_RS02845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS02845 PF08447 PAS fold TCR_RS02845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS02850 PF04408 Helicase associated domain (HA2) TCR_RS02850 PF08482 ATP-dependent helicase C-terminal TCR_RS02850 PF00270 DEAD/DEAH box helicase TCR_RS02850 PF00271 Helicase conserved C-terminal domain TCR_RS02875 PF02381 MraZ protein, putative antitoxin-like TCR_RS02880 PF01795 MraW methylase family TCR_RS02885 PF00091 Tubulin/FtsZ family, GTPase domain TCR_RS02885 PF12327 FtsZ family, C-terminal domain TCR_RS02895 PF00905 Penicillin binding protein transpeptidase domain TCR_RS02895 PF03717 Penicillin-binding Protein dimerisation domain TCR_RS02900 PF01225 Mur ligase family, catalytic domain TCR_RS02900 PF02875 Mur ligase family, glutamate ligase domain TCR_RS02900 PF08245 Mur ligase middle domain TCR_RS02905 PF08245 Mur ligase middle domain TCR_RS02905 PF01225 Mur ligase family, catalytic domain TCR_RS02905 PF02875 Mur ligase family, glutamate ligase domain TCR_RS02910 PF00953 Glycosyl transferase family 4 TCR_RS02915 PF08245 Mur ligase middle domain TCR_RS02915 PF02875 Mur ligase family, glutamate ligase domain TCR_RS02920 PF01098 Cell cycle protein TCR_RS02925 PF03033 Glycosyltransferase family 28 N-terminal domain TCR_RS02925 PF04101 Glycosyltransferase family 28 C-terminal domain TCR_RS02940 PF00672 HAMP domain TCR_RS02940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS02940 PF12729 Four helix bundle sensory module for signal transduction TCR_RS02945 PF01790 Prolipoprotein diacylglyceryl transferase TCR_RS02950 PF00303 Thymidylate synthase TCR_RS02955 PF00186 Dihydrofolate reductase TCR_RS02960 PF02203 Tar ligand binding domain homologue TCR_RS02960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS02960 PF00672 HAMP domain TCR_RS02965 PF00950 ABC 3 transport family TCR_RS02970 PF00005 ABC transporter TCR_RS02975 PF01297 Zinc-uptake complex component A periplasmic TCR_RS02985 PF01458 Uncharacterized protein family (UPF0051) TCR_RS02990 PF00005 ABC transporter TCR_RS02995 PF01458 Uncharacterized protein family (UPF0051) TCR_RS03000 PF00266 Aminotransferase class-V TCR_RS03010 PF02875 Mur ligase family, glutamate ligase domain TCR_RS03010 PF08245 Mur ligase middle domain TCR_RS03010 PF01225 Mur ligase family, catalytic domain TCR_RS03015 PF07478 D-ala D-ala ligase C-terminus TCR_RS03015 PF01820 D-ala D-ala ligase N-terminus TCR_RS03020 PF03799 Cell division protein FtsQ TCR_RS03020 PF08478 POTRA domain, FtsQ-type TCR_RS03025 PF02491 SHS2 domain inserted in FTSA TCR_RS03030 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase TCR_RS03035 PF02810 SEC-C motif TCR_RS03035 PF07516 SecA Wing and Scaffold domain TCR_RS03035 PF07517 SecA DEAD-like domain TCR_RS03035 PF01043 SecA preprotein cross-linking domain TCR_RS03040 PF01960 ArgJ family TCR_RS03045 PF00155 Aminotransferase class I and II TCR_RS03050 PF02581 Thiamine monophosphate synthase TCR_RS03060 PF01121 Dephospho-CoA kinase TCR_RS03065 PF13537 Glutamine amidotransferase domain TCR_RS03065 PF00733 Asparagine synthase TCR_RS03070 PF00462 Glutaredoxin TCR_RS03075 PF00929 Exonuclease TCR_RS03080 PF00583 Acetyltransferase (GNAT) family TCR_RS03080 PF00696 Amino acid kinase family TCR_RS03085 PF00920 Dehydratase family TCR_RS03115 PF13181 Tetratricopeptide repeat TCR_RS03115 PF01435 Peptidase family M48 TCR_RS03120 PF01206 Sulfurtransferase TusA TCR_RS03125 PF00483 Nucleotidyl transferase TCR_RS03130 PF00342 Phosphoglucose isomerase TCR_RS03135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TCR_RS03135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TCR_RS03135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TCR_RS03140 PF01066 CDP-alcohol phosphatidyltransferase TCR_RS03145 PF08502 LeuA allosteric (dimerisation) domain TCR_RS03145 PF00682 HMGL-like TCR_RS03155 PF00814 Glycoprotease family TCR_RS03155 PF00583 Acetyltransferase (GNAT) family TCR_RS03160 PF00459 Inositol monophosphatase family TCR_RS03165 PF00588 SpoU rRNA Methylase family TCR_RS03170 PF00132 Bacterial transferase hexapeptide (six repeats) TCR_RS03175 PF02082 Transcriptional regulator TCR_RS03180 PF01521 Iron-sulphur cluster biosynthesis TCR_RS03185 PF00334 Nucleoside diphosphate kinase TCR_RS03190 PF04055 Radical SAM superfamily TCR_RS03200 PF03129 Anticodon binding domain TCR_RS03200 PF13393 Histidyl-tRNA synthetase TCR_RS03210 PF13360 PQQ-like domain TCR_RS03215 PF01926 50S ribosome-binding GTPase TCR_RS03215 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TCR_RS03220 PF13183 4Fe-4S dicluster domain TCR_RS03220 PF02913 FAD linked oxidases, C-terminal domain TCR_RS03220 PF01565 FAD binding domain TCR_RS03225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TCR_RS03225 PF01842 ACT domain TCR_RS03225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TCR_RS03230 PF00034 Cytochrome c TCR_RS03235 PF00034 Cytochrome c TCR_RS03245 PF03193 RsgA GTPase TCR_RS03250 PF01329 Pterin 4 alpha carbinolamine dehydratase TCR_RS03255 PF01435 Peptidase family M48 TCR_RS03260 PF00929 Exonuclease TCR_RS03265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TCR_RS03265 PF00205 Thiamine pyrophosphate enzyme, central domain TCR_RS03265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TCR_RS03270 PF10369 Small subunit of acetolactate synthase TCR_RS03275 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TCR_RS03275 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TCR_RS03280 PF01471 Putative peptidoglycan binding domain TCR_RS03280 PF13401 AAA domain TCR_RS03290 PF00263 Bacterial type II and III secretion system protein TCR_RS03290 PF03958 Bacterial type II/III secretion system short domain TCR_RS03300 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TCR_RS03300 PF00437 Type II/IV secretion system protein TCR_RS03305 PF00482 Type II secretion system (T2SS), protein F TCR_RS03325 PF02646 RmuC family TCR_RS03330 PF00886 Ribosomal protein S16 TCR_RS03335 PF01782 RimM N-terminal domain TCR_RS03335 PF05239 PRC-barrel domain TCR_RS03340 PF01746 tRNA (Guanine-1)-methyltransferase TCR_RS03345 PF01245 Ribosomal protein L19 TCR_RS03350 PF02899 Phage integrase, N-terminal SAM-like domain TCR_RS03350 PF00589 Phage integrase family TCR_RS03355 PF13098 Thioredoxin-like domain TCR_RS03355 PF10411 Disulfide bond isomerase protein N-terminus TCR_RS03370 PF00849 RNA pseudouridylate synthase TCR_RS03375 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain TCR_RS03375 PF00589 Phage integrase family TCR_RS03440 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TCR_RS03440 PF12826 Helix-hairpin-helix motif TCR_RS03440 PF01653 NAD-dependent DNA ligase adenylation domain TCR_RS03440 PF00533 BRCA1 C Terminus (BRCT) domain TCR_RS03440 PF03120 NAD-dependent DNA ligase OB-fold domain TCR_RS03540 PF01343 Peptidase family S49 TCR_RS03610 PF04984 Phage tail sheath protein subtilisin-like domain TCR_RS03610 PF17482 Phage tail sheath C-terminal domain TCR_RS03650 PF01451 Low molecular weight phosphotyrosine protein phosphatase TCR_RS03655 PF00575 S1 RNA binding domain TCR_RS03655 PF10150 Ribonuclease E/G family TCR_RS03655 PF12111 Polyribonucleotide phosphorylase C terminal TCR_RS03660 PF01479 S4 domain TCR_RS03660 PF00849 RNA pseudouridylate synthase TCR_RS03665 PF13419 Haloacid dehalogenase-like hydrolase TCR_RS03670 PF02545 Maf-like protein TCR_RS03680 PF01783 Ribosomal L32p protein family TCR_RS03685 PF02504 Fatty acid synthesis protein TCR_RS03690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TCR_RS03690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TCR_RS03695 PF00698 Acyl transferase domain TCR_RS03705 PF00550 Phosphopantetheine attachment site TCR_RS03710 PF02801 Beta-ketoacyl synthase, C-terminal domain TCR_RS03710 PF00109 Beta-ketoacyl synthase, N-terminal domain TCR_RS03715 PF04715 Anthranilate synthase component I, N terminal region TCR_RS03715 PF00425 chorismate binding enzyme TCR_RS03720 PF01063 Amino-transferase class IV TCR_RS03725 PF02618 YceG-like family TCR_RS03730 PF02223 Thymidylate kinase TCR_RS03735 PF09115 DNA polymerase III, delta subunit, C terminal TCR_RS03740 PF01026 TatD related DNase TCR_RS03745 PF00664 ABC transporter transmembrane region TCR_RS03745 PF00005 ABC transporter TCR_RS03770 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TCR_RS03770 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TCR_RS03780 PF00472 RF-1 domain TCR_RS03780 PF03462 PCRF domain TCR_RS03785 PF01336 OB-fold nucleic acid binding domain TCR_RS03785 PF00152 tRNA synthetases class II (D, K and N) TCR_RS03790 PF01571 Aminomethyltransferase folate-binding domain TCR_RS03795 PF01584 CheW-like domain TCR_RS03800 PF02910 Fumarate reductase flavoprotein C-term TCR_RS03800 PF00890 FAD binding domain TCR_RS03810 PF13180 PDZ domain TCR_RS03815 PF00679 Elongation factor G C-terminus TCR_RS03815 PF00009 Elongation factor Tu GTP binding domain TCR_RS03815 PF03144 Elongation factor Tu domain 2 TCR_RS03815 PF06421 GTP-binding protein LepA C-terminus TCR_RS03820 PF10502 Signal peptidase, peptidase S26 TCR_RS03825 PF00035 Double-stranded RNA binding motif TCR_RS03825 PF14622 Ribonuclease-III-like TCR_RS03830 PF01926 50S ribosome-binding GTPase TCR_RS03830 PF07650 KH domain TCR_RS03835 PF02565 Recombination protein O C terminal TCR_RS03835 PF11967 Recombination protein O N terminal TCR_RS03840 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ TCR_RS03845 PF01648 4'-phosphopantetheinyl transferase superfamily TCR_RS03850 PF04347 Flagellar biosynthesis protein, FliO TCR_RS03855 PF00813 FliP family TCR_RS03860 PF01313 Bacterial export proteins, family 3 TCR_RS03865 PF01311 Bacterial export proteins, family 1 TCR_RS03870 PF01312 FlhB HrpN YscU SpaS Family TCR_RS03875 PF00771 FHIPEP family TCR_RS03880 PF00448 SRP54-type protein, GTPase domain TCR_RS03885 PF10609 NUBPL iron-transfer P-loop NTPase TCR_RS03890 PF04542 Sigma-70 region 2 TCR_RS03890 PF04539 Sigma-70 region 3 TCR_RS03890 PF04545 Sigma-70, region 4 TCR_RS03895 PF00072 Response regulator receiver domain TCR_RS03900 PF04344 Chemotaxis phosphatase, CheZ TCR_RS03905 PF00072 Response regulator receiver domain TCR_RS03905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS03905 PF02895 Signal transducing histidine kinase, homodimeric domain TCR_RS03905 PF01584 CheW-like domain TCR_RS03905 PF01627 Hpt domain TCR_RS03910 PF01584 CheW-like domain TCR_RS03925 PF00072 Response regulator receiver domain TCR_RS03930 PF01584 CheW-like domain TCR_RS03940 PF01739 CheR methyltransferase, SAM binding domain TCR_RS03940 PF03705 CheR methyltransferase, all-alpha domain TCR_RS03945 PF01339 CheB methylesterase TCR_RS03945 PF00072 Response regulator receiver domain TCR_RS03950 PF02743 Cache domain TCR_RS03950 PF00672 HAMP domain TCR_RS03950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS03960 PF01784 NIF3 (NGG1p interacting factor 3) TCR_RS03965 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TCR_RS03965 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TCR_RS03970 PF07992 Pyridine nucleotide-disulphide oxidoreductase TCR_RS03975 PF13491 4TM region of DNA translocase FtsK/SpoIIIE TCR_RS03975 PF09397 Ftsk gamma domain TCR_RS03975 PF01580 FtsK/SpoIIIE family TCR_RS03975 PF17854 FtsK alpha domain TCR_RS03980 PF03548 Outer membrane lipoprotein carrier protein LolA TCR_RS03985 PF12002 MgsA AAA+ ATPase C terminal TCR_RS03985 PF00004 ATPase family associated with various cellular activities (AAA) TCR_RS03985 PF16193 AAA C-terminal domain TCR_RS03990 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TCR_RS03995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TCR_RS03995 PF02403 Seryl-tRNA synthetase N-terminal domain TCR_RS04015 PF00563 EAL domain TCR_RS04015 PF05231 MASE1 TCR_RS04035 PF00128 Alpha amylase, catalytic domain TCR_RS04040 PF02595 Glycerate kinase family TCR_RS04045 PF00563 EAL domain TCR_RS04045 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS04045 PF08448 PAS fold TCR_RS04050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS04050 PF00672 HAMP domain TCR_RS04050 PF17200 Single Cache domain 2 TCR_RS04060 PF00270 DEAD/DEAH box helicase TCR_RS04060 PF00271 Helicase conserved C-terminal domain TCR_RS04065 PF04264 YceI-like domain TCR_RS04070 PF01292 Prokaryotic cytochrome b561 TCR_RS04075 PF08338 Domain of unknown function (DUF1731) TCR_RS04075 PF01370 NAD dependent epimerase/dehydratase family TCR_RS04080 PF01625 Peptide methionine sulfoxide reductase TCR_RS04085 PF00578 AhpC/TSA family TCR_RS04090 PF08448 PAS fold TCR_RS04090 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS04095 PF02082 Transcriptional regulator TCR_RS04105 PF02082 Transcriptional regulator TCR_RS04115 PF09285 Elongation factor P, C-terminal TCR_RS04115 PF01132 Elongation factor P (EF-P) OB domain TCR_RS04115 PF08207 Elongation factor P (EF-P) KOW-like domain TCR_RS04140 PF00330 Aconitase family (aconitate hydratase) TCR_RS04145 PF00694 Aconitase C-terminal domain TCR_RS04150 PF00180 Isocitrate/isopropylmalate dehydrogenase TCR_RS04155 PF01551 Peptidase family M23 TCR_RS04155 PF04225 Opacity-associated protein A LysM-like domain TCR_RS04165 PF02774 Semialdehyde dehydrogenase, dimerisation domain TCR_RS04165 PF01118 Semialdehyde dehydrogenase, NAD binding domain TCR_RS04170 PF01416 tRNA pseudouridine synthase TCR_RS04175 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TCR_RS04180 PF00291 Pyridoxal-phosphate dependent enzyme TCR_RS04185 PF00290 Tryptophan synthase alpha chain TCR_RS04190 PF01039 Carboxyl transferase domain TCR_RS04190 PF17848 Acetyl-coA carboxylase zinc finger domain TCR_RS04195 PF02875 Mur ligase family, glutamate ligase domain TCR_RS04195 PF08245 Mur ligase middle domain TCR_RS04205 PF00156 Phosphoribosyl transferase domain TCR_RS04210 PF01053 Cys/Met metabolism PLP-dependent enzyme TCR_RS04215 PF01985 CRS1 / YhbY (CRM) domain TCR_RS04220 PF01728 FtsJ-like methyltransferase TCR_RS04225 PF00004 ATPase family associated with various cellular activities (AAA) TCR_RS04225 PF17862 AAA+ lid domain TCR_RS04225 PF06480 FtsH Extracellular TCR_RS04225 PF01434 Peptidase family M41 TCR_RS04230 PF00809 Pterin binding enzyme TCR_RS04235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TCR_RS04235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TCR_RS04235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TCR_RS04235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TCR_RS04240 PF00121 Triosephosphate isomerase TCR_RS04245 PF03840 Preprotein translocase SecG subunit TCR_RS04255 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TCR_RS04260 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TCR_RS04265 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TCR_RS04270 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TCR_RS04280 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TCR_RS04280 PF10531 SLBB domain TCR_RS04280 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TCR_RS04285 PF00384 Molybdopterin oxidoreductase TCR_RS04285 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TCR_RS04285 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal TCR_RS04290 PF00146 NADH dehydrogenase TCR_RS04295 PF12838 4Fe-4S dicluster domain TCR_RS04300 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TCR_RS04305 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TCR_RS04310 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TCR_RS04310 PF00361 Proton-conducting membrane transporter TCR_RS04315 PF00361 Proton-conducting membrane transporter TCR_RS04315 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus TCR_RS04320 PF00361 Proton-conducting membrane transporter TCR_RS04335 PF00589 Phage integrase family TCR_RS04380 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain TCR_RS04380 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain TCR_RS04385 PF00101 Ribulose bisphosphate carboxylase, small chain TCR_RS04410 PF00936 BMC domain TCR_RS04415 PF00936 BMC domain TCR_RS04420 PF00936 BMC domain TCR_RS04430 PF01329 Pterin 4 alpha carbinolamine dehydratase TCR_RS04445 PF01725 Ham1 family TCR_RS04455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TCR_RS04455 PF03466 LysR substrate binding domain TCR_RS04460 PF13244 Domain of unknown function (DUF4040) TCR_RS04460 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TCR_RS04460 PF00361 Proton-conducting membrane transporter TCR_RS04465 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) TCR_RS04470 PF00850 Histone deacetylase domain TCR_RS04485 PF00717 Peptidase S24-like TCR_RS04490 PF13438 Domain of unknown function (DUF4113) TCR_RS04490 PF00817 impB/mucB/samB family TCR_RS04490 PF11798 IMS family HHH motif TCR_RS04490 PF11799 impB/mucB/samB family C-terminal domain TCR_RS04495 PF08668 HDOD domain TCR_RS04495 PF00563 EAL domain TCR_RS04500 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS04500 PF00072 Response regulator receiver domain TCR_RS04525 PF02463 RecF/RecN/SMC N terminal domain TCR_RS04530 PF01513 ATP-NAD kinase TCR_RS04535 PF01628 HrcA protein C terminal domain TCR_RS04540 PF01025 GrpE TCR_RS04545 PF00012 Hsp70 protein TCR_RS04550 PF01556 DnaJ C terminal domain TCR_RS04550 PF00684 DnaJ central domain TCR_RS04550 PF00226 DnaJ domain TCR_RS04555 PF05173 Dihydrodipicolinate reductase, C-terminus TCR_RS04555 PF01113 Dihydrodipicolinate reductase, N-terminus TCR_RS04565 PF00472 RF-1 domain TCR_RS04570 PF07690 Major Facilitator Superfamily TCR_RS04580 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TCR_RS04580 PF00117 Glutamine amidotransferase class-I TCR_RS04585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TCR_RS04585 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TCR_RS04585 PF02142 MGS-like domain TCR_RS04590 PF03449 Transcription elongation factor, N-terminal TCR_RS04590 PF01272 Transcription elongation factor, GreA/GreB, C-term TCR_RS04605 PF04305 Protein of unknown function (DUF455) TCR_RS04615 PF00480 ROK family TCR_RS04625 PF01734 Patatin-like phospholipase TCR_RS04630 PF00106 short chain dehydrogenase TCR_RS04640 PF02938 GAD domain TCR_RS04640 PF00152 tRNA synthetases class II (D, K and N) TCR_RS04640 PF01336 OB-fold nucleic acid binding domain TCR_RS04645 PF02445 Quinolinate synthetase A protein TCR_RS04650 PF02075 Crossover junction endodeoxyribonuclease RuvC TCR_RS04655 PF01330 RuvA N terminal domain TCR_RS04655 PF07499 RuvA, C-terminal domain TCR_RS04660 PF05496 Holliday junction DNA helicase RuvB P-loop domain TCR_RS04660 PF05491 RuvB C-terminal winged helix domain TCR_RS04660 PF17864 RuvB AAA lid domain TCR_RS04665 PF01618 MotA/TolQ/ExbB proton channel family TCR_RS04670 PF02472 Biopolymer transport protein ExbD/TolR TCR_RS04680 PF07676 WD40-like Beta Propeller Repeat TCR_RS04680 PF04052 TolB amino-terminal domain TCR_RS04685 PF00691 OmpA family TCR_RS04695 PF06508 Queuosine biosynthesis protein QueC TCR_RS04725 PF00989 PAS fold TCR_RS04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS04725 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS04730 PF00072 Response regulator receiver domain TCR_RS04730 PF00158 Sigma-54 interaction domain TCR_RS04730 PF02954 Bacterial regulatory protein, Fis family TCR_RS04760 PF00543 Nitrogen regulatory protein P-II TCR_RS04765 PF02666 Phosphatidylserine decarboxylase TCR_RS04770 PF00764 Arginosuccinate synthase TCR_RS04775 PF04608 Phosphatidylglycerophosphatase A TCR_RS04785 PF00375 Sodium:dicarboxylate symporter family TCR_RS04795 PF00149 Calcineurin-like phosphoesterase TCR_RS04800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TCR_RS04805 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TCR_RS04810 PF00749 tRNA synthetases class I (E and Q), catalytic domain TCR_RS04810 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain TCR_RS04815 PF01406 tRNA synthetases class I (C) catalytic domain TCR_RS04815 PF09190 DALR domain TCR_RS04820 PF14718 Soluble lytic murein transglycosylase L domain TCR_RS04820 PF01464 Transglycosylase SLT domain TCR_RS04825 PF01476 LysM domain TCR_RS04825 PF05257 CHAP domain TCR_RS04830 PF16123 Hydroxyacylglutathione hydrolase C-terminus TCR_RS04830 PF00753 Metallo-beta-lactamase superfamily TCR_RS04835 PF08241 Methyltransferase domain TCR_RS04840 PF00075 RNase H TCR_RS04850 PF00929 Exonuclease TCR_RS04855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TCR_RS04860 PF00753 Metallo-beta-lactamase superfamily TCR_RS04865 PF03372 Endonuclease/Exonuclease/phosphatase family TCR_RS04870 PF13396 Phospholipase_D-nuclease N-terminal TCR_RS04870 PF13091 PLD-like domain TCR_RS04875 PF01544 CorA-like Mg2+ transporter protein TCR_RS04930 PF01479 S4 domain TCR_RS04930 PF00849 RNA pseudouridylate synthase TCR_RS04945 PF01145 SPFH domain / Band 7 family TCR_RS04945 PF16200 C-terminal region of band_7 TCR_RS04950 PF00271 Helicase conserved C-terminal domain TCR_RS04950 PF00270 DEAD/DEAH box helicase TCR_RS04950 PF03880 DbpA RNA binding domain TCR_RS04955 PF03625 Domain of unknown function DUF302 TCR_RS04955 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TCR_RS04960 PF04408 Helicase associated domain (HA2) TCR_RS04960 PF00271 Helicase conserved C-terminal domain TCR_RS04960 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold TCR_RS04960 PF11898 Domain of unknown function (DUF3418) TCR_RS04960 PF00270 DEAD/DEAH box helicase TCR_RS04980 PF00909 Ammonium Transporter Family TCR_RS04985 PF13654 AAA domain TCR_RS04985 PF05362 Lon protease (S16) C-terminal proteolytic domain TCR_RS04995 PF00753 Metallo-beta-lactamase superfamily TCR_RS04995 PF03772 Competence protein TCR_RS05000 PF02606 Tetraacyldisaccharide-1-P 4'-kinase TCR_RS05005 PF03966 Trm112p-like protein TCR_RS05010 PF02348 Cytidylyltransferase TCR_RS05020 PF01497 Periplasmic binding protein TCR_RS05025 PF00593 TonB dependent receptor TCR_RS05025 PF07715 TonB-dependent Receptor Plug Domain TCR_RS05055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS05055 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS05055 PF00672 HAMP domain TCR_RS05060 PF00486 Transcriptional regulatory protein, C terminal TCR_RS05060 PF00072 Response regulator receiver domain TCR_RS05065 PF03144 Elongation factor Tu domain 2 TCR_RS05065 PF16658 Class II release factor RF3, C-terminal domain TCR_RS05065 PF00009 Elongation factor Tu GTP binding domain TCR_RS05070 PF03448 MgtE intracellular N domain TCR_RS05070 PF01769 Divalent cation transporter TCR_RS05070 PF00571 CBS domain TCR_RS05075 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TCR_RS05080 PF00005 ABC transporter TCR_RS05080 PF12399 Branched-chain amino acid ATP-binding cassette transporter TCR_RS05100 PF01699 Sodium/calcium exchanger protein TCR_RS05110 PF00005 ABC transporter TCR_RS05115 PF02405 Permease MlaE TCR_RS05120 PF02470 MlaD protein TCR_RS05135 PF00005 ABC transporter TCR_RS05140 PF01061 ABC-2 type transporter TCR_RS05150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TCR_RS05155 PF01634 ATP phosphoribosyltransferase TCR_RS05160 PF00815 Histidinol dehydrogenase TCR_RS05165 PF01784 NIF3 (NGG1p interacting factor 3) TCR_RS05170 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TCR_RS05170 PF00355 Rieske [2Fe-2S] domain TCR_RS05175 PF00032 Cytochrome b(C-terminal)/b6/petD TCR_RS05175 PF00033 Cytochrome b/b6/petB TCR_RS05180 PF02167 Cytochrome C1 family TCR_RS05185 PF18073 Rubredoxin metal binding domain TCR_RS05190 PF00459 Inositol monophosphatase family TCR_RS05195 PF01595 Cyclin M transmembrane N-terminal domain TCR_RS05195 PF03471 Transporter associated domain TCR_RS05195 PF00571 CBS domain TCR_RS05200 PF01578 Cytochrome C assembly protein TCR_RS05205 PF02978 Signal peptide binding domain TCR_RS05205 PF00448 SRP54-type protein, GTPase domain TCR_RS05205 PF02881 SRP54-type protein, helical bundle domain TCR_RS05215 PF00293 NUDIX domain TCR_RS05220 PF17831 Pyruvate dehydrogenase E1 component middle domain TCR_RS05220 PF00456 Transketolase, thiamine diphosphate binding domain TCR_RS05225 PF00364 Biotin-requiring enzyme TCR_RS05225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TCR_RS05225 PF02817 e3 binding domain TCR_RS05230 PF07992 Pyridine nucleotide-disulphide oxidoreductase TCR_RS05230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TCR_RS05245 PF12843 Putative quorum-sensing-regulated virulence factor TCR_RS05265 PF03358 NADPH-dependent FMN reductase TCR_RS05280 PF02525 Flavodoxin-like fold TCR_RS05285 PF01545 Cation efflux family TCR_RS05290 PF00270 DEAD/DEAH box helicase TCR_RS05290 PF00271 Helicase conserved C-terminal domain TCR_RS05305 PF13614 AAA domain TCR_RS05315 PF08028 Acyl-CoA dehydrogenase, C-terminal domain TCR_RS05320 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS05320 PF08448 PAS fold TCR_RS05325 PF02769 AIR synthase related protein, C-terminal domain TCR_RS05325 PF00586 AIR synthase related protein, N-terminal domain TCR_RS05335 PF00881 Nitroreductase family TCR_RS05345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TCR_RS05345 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TCR_RS05365 PF00730 HhH-GPD superfamily base excision DNA repair protein TCR_RS05365 PF00633 Helix-hairpin-helix motif TCR_RS05365 PF10576 Iron-sulfur binding domain of endonuclease III TCR_RS05370 PF02508 Rnf-Nqr subunit, membrane protein TCR_RS05375 PF04205 FMN-binding domain TCR_RS05380 PF03116 NQR2, RnfD, RnfE family TCR_RS05385 PF12838 4Fe-4S dicluster domain TCR_RS05385 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TCR_RS05385 PF13375 RnfC Barrel sandwich hybrid domain TCR_RS05385 PF10531 SLBB domain TCR_RS05390 PF04060 Putative Fe-S cluster TCR_RS05395 PF02508 Rnf-Nqr subunit, membrane protein TCR_RS05400 PF09334 tRNA synthetases class I (M) TCR_RS05400 PF01588 Putative tRNA binding domain TCR_RS05410 PF13466 STAS domain TCR_RS05415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS05415 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS05415 PF00072 Response regulator receiver domain TCR_RS05415 PF08448 PAS fold TCR_RS05415 PF13426 PAS domain TCR_RS05420 PF00072 Response regulator receiver domain TCR_RS05420 PF04397 LytTr DNA-binding domain TCR_RS05425 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS05425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS05425 PF00989 PAS fold TCR_RS05430 PF10609 NUBPL iron-transfer P-loop NTPase TCR_RS05435 PF00692 dUTPase TCR_RS05445 PF00551 Formyl transferase TCR_RS05450 PF02769 AIR synthase related protein, C-terminal domain TCR_RS05450 PF00586 AIR synthase related protein, N-terminal domain TCR_RS05460 PF00308 Bacterial dnaA protein TCR_RS05465 PF00578 AhpC/TSA family TCR_RS05485 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ TCR_RS05490 PF01926 50S ribosome-binding GTPase TCR_RS05505 PF00313 'Cold-shock' DNA-binding domain TCR_RS05525 PF05661 Protein of unknown function (DUF808) TCR_RS05530 PF07694 5TMR of 5TMR-LYT TCR_RS05530 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS05545 PF00689 Cation transporting ATPase, C-terminus TCR_RS05545 PF00690 Cation transporter/ATPase, N-terminus TCR_RS05550 PF13520 Amino acid permease TCR_RS05555 PF13194 Domain of unknown function (DUF4010) TCR_RS05560 PF00892 EamA-like transporter family TCR_RS05565 PF00156 Phosphoribosyl transferase domain TCR_RS05565 PF05139 Erythromycin esterase TCR_RS05570 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) TCR_RS05580 PF00144 Beta-lactamase TCR_RS05595 PF04073 Aminoacyl-tRNA editing domain TCR_RS05595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TCR_RS05595 PF03129 Anticodon binding domain TCR_RS05600 PF03006 Haemolysin-III related TCR_RS05620 PF13286 Phosphohydrolase-associated domain TCR_RS05620 PF01966 HD domain TCR_RS05625 PF03707 Bacterial signalling protein N terminal repeat TCR_RS05625 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS05625 PF00563 EAL domain TCR_RS05630 PF08331 Domain of unknown function (DUF1730) TCR_RS05635 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TCR_RS05640 PF11741 AMIN domain TCR_RS05640 PF01520 N-acetylmuramoyl-L-alanine amidase TCR_RS05645 PF01119 DNA mismatch repair protein, C-terminal domain TCR_RS05645 PF08676 MutL C terminal dimerisation domain TCR_RS05655 PF17209 Hfq protein TCR_RS05660 PF13167 GTP-binding GTPase N-terminal TCR_RS05660 PF01926 50S ribosome-binding GTPase TCR_RS05660 PF16360 GTP-binding GTPase Middle Region TCR_RS05670 PF00563 EAL domain TCR_RS05670 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS05670 PF03707 Bacterial signalling protein N terminal repeat TCR_RS05675 PF12221 Bacterial membrane protein N terminal TCR_RS05675 PF01145 SPFH domain / Band 7 family TCR_RS05680 PF01145 SPFH domain / Band 7 family TCR_RS05690 PF13393 Histidyl-tRNA synthetase TCR_RS05695 PF00709 Adenylosuccinate synthetase TCR_RS05700 PF00072 Response regulator receiver domain TCR_RS05705 PF13145 PPIC-type PPIASE domain TCR_RS05715 PF04356 Protein of unknown function (DUF489) TCR_RS05725 PF00849 RNA pseudouridylate synthase TCR_RS05730 PF03971 Monomeric isocitrate dehydrogenase TCR_RS05740 PF01541 GIY-YIG catalytic domain TCR_RS05745 PF01709 Transcriptional regulator TCR_RS05765 PF17158 Membrane-associated sensor, integral membrane domain TCR_RS05765 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS05770 PF03831 PhnA domain TCR_RS05770 PF08274 PhnA Zinc-Ribbon TCR_RS05775 PF00226 DnaJ domain TCR_RS05775 PF01556 DnaJ C terminal domain TCR_RS05780 PF02617 ATP-dependent Clp protease adaptor protein ClpS TCR_RS05785 PF17871 AAA lid domain TCR_RS05785 PF07724 AAA domain (Cdc48 subfamily) TCR_RS05785 PF00004 ATPase family associated with various cellular activities (AAA) TCR_RS05785 PF02861 Clp amino terminal domain, pathogenicity island component TCR_RS05785 PF10431 C-terminal, D2-small domain, of ClpB protein TCR_RS05790 PF01176 Translation initiation factor 1A / IF-1 TCR_RS05795 PF03588 Leucyl/phenylalanyl-tRNA protein transferase TCR_RS05800 PF14579 Helix-hairpin-helix motif TCR_RS05800 PF02811 PHP domain TCR_RS05800 PF01336 OB-fold nucleic acid binding domain TCR_RS05800 PF07733 Bacterial DNA polymerase III alpha NTPase domain TCR_RS05800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TCR_RS05805 PF00501 AMP-binding enzyme TCR_RS05805 PF13193 AMP-binding enzyme C-terminal domain TCR_RS05805 PF16177 Acetyl-coenzyme A synthetase N-terminus TCR_RS05810 PF04341 Protein of unknown function, DUF485 TCR_RS05815 PF00474 Sodium:solute symporter family TCR_RS05830 PF02576 RimP N-terminal domain TCR_RS05830 PF17384 RimP C-terminal SH3 domain TCR_RS05835 PF13184 NusA-like KH domain TCR_RS05835 PF08529 NusA N-terminal domain TCR_RS05840 PF04760 Translation initiation factor IF-2, N-terminal region TCR_RS05840 PF08364 Bacterial translation initiation factor IF-2 associated region TCR_RS05840 PF00009 Elongation factor Tu GTP binding domain TCR_RS05840 PF11987 Translation-initiation factor 2 TCR_RS05845 PF02033 Ribosome-binding factor A TCR_RS05850 PF09157 Pseudouridine synthase II TruB, C-terminal TCR_RS05850 PF01509 TruB family pseudouridylate synthase (N terminal domain) TCR_RS05850 PF16198 tRNA pseudouridylate synthase B C-terminal domain TCR_RS05855 PF09313 Domain of unknown function (DUF1971) TCR_RS05855 PF03848 Tellurite resistance protein TehB TCR_RS05865 PF00312 Ribosomal protein S15 TCR_RS05870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TCR_RS05870 PF00575 S1 RNA binding domain TCR_RS05870 PF03725 3' exoribonuclease family, domain 2 TCR_RS05870 PF01138 3' exoribonuclease family, domain 1 TCR_RS05870 PF00013 KH domain TCR_RS05875 PF08367 Peptidase M16C associated TCR_RS05875 PF00675 Insulinase (Peptidase family M16) TCR_RS05875 PF05193 Peptidase M16 inactive domain TCR_RS05885 PF08007 Cupin superfamily protein TCR_RS05890 PF13533 Biotin-lipoyl like TCR_RS05895 PF00005 ABC transporter TCR_RS05900 PF00005 ABC transporter TCR_RS05910 PF00206 Lyase TCR_RS05910 PF08328 Adenylosuccinate lyase C-terminal TCR_RS05930 PF01566 Natural resistance-associated macrophage protein TCR_RS05935 PF11791 Aconitate B N-terminal domain TCR_RS05935 PF00330 Aconitase family (aconitate hydratase) TCR_RS05935 PF06434 Aconitate hydratase 2 N-terminus TCR_RS05940 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS05945 PF01343 Peptidase family S49 TCR_RS05950 PF12826 Helix-hairpin-helix motif TCR_RS05950 PF08459 UvrC Helix-hairpin-helix N-terminal TCR_RS05950 PF01541 GIY-YIG catalytic domain TCR_RS05950 PF02151 UvrB/uvrC motif TCR_RS05955 PF01066 CDP-alcohol phosphatidyltransferase TCR_RS05995 PF08376 Nitrate and nitrite sensing TCR_RS05995 PF03861 ANTAR domain TCR_RS06000 PF00005 ABC transporter TCR_RS06010 PF00528 Binding-protein-dependent transport system inner membrane component TCR_RS06015 PF00005 ABC transporter TCR_RS06020 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TCR_RS06020 PF18267 Rubredoxin NAD+ reductase C-terminal domain TCR_RS06020 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TCR_RS06020 PF04324 BFD-like [2Fe-2S] binding domain TCR_RS06020 PF07992 Pyridine nucleotide-disulphide oxidoreductase TCR_RS06025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TCR_RS06025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TCR_RS06025 PF07992 Pyridine nucleotide-disulphide oxidoreductase TCR_RS06025 PF04324 BFD-like [2Fe-2S] binding domain TCR_RS06025 PF18267 Rubredoxin NAD+ reductase C-terminal domain TCR_RS06030 PF13806 Rieske-like [2Fe-2S] domain TCR_RS06030 PF18267 Rubredoxin NAD+ reductase C-terminal domain TCR_RS06030 PF07992 Pyridine nucleotide-disulphide oxidoreductase TCR_RS06030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TCR_RS06030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TCR_RS06030 PF04324 BFD-like [2Fe-2S] binding domain TCR_RS06035 PF04324 BFD-like [2Fe-2S] binding domain TCR_RS06035 PF01568 Molydopterin dinucleotide binding domain TCR_RS06035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TCR_RS06035 PF00384 Molybdopterin oxidoreductase TCR_RS06040 PF10414 Sirohaem synthase dimerisation region TCR_RS06040 PF14824 Sirohaem biosynthesis protein central TCR_RS06040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TCR_RS06045 PF02885 Glycosyl transferase family, helical bundle domain TCR_RS06045 PF00591 Glycosyl transferase family, a/b domain TCR_RS06050 PF03453 MoeA N-terminal region (domain I and II) TCR_RS06050 PF03454 MoeA C-terminal region (domain IV) TCR_RS06050 PF00994 Probable molybdopterin binding domain TCR_RS06060 PF05209 Septum formation inhibitor MinC, N-terminal domain TCR_RS06060 PF03775 Septum formation inhibitor MinC, C-terminal domain TCR_RS06065 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TCR_RS06070 PF03776 Septum formation topological specificity factor MinE TCR_RS06080 PF00270 DEAD/DEAH box helicase TCR_RS06080 PF02559 CarD-like/TRCF domain TCR_RS06080 PF00271 Helicase conserved C-terminal domain TCR_RS06080 PF03461 TRCF domain TCR_RS06080 PF17757 UvrB interaction domain TCR_RS06090 PF07992 Pyridine nucleotide-disulphide oxidoreductase TCR_RS06095 PF03458 UPF0126 domain TCR_RS06100 PF12704 MacB-like periplasmic core domain TCR_RS06100 PF02687 FtsX-like permease family TCR_RS06105 PF00005 ABC transporter TCR_RS06110 PF12848 ABC transporter TCR_RS06110 PF00005 ABC transporter TCR_RS06120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TCR_RS06120 PF05698 Bacterial trigger factor protein (TF) C-terminus TCR_RS06120 PF05697 Bacterial trigger factor protein (TF) TCR_RS06125 PF00574 Clp protease TCR_RS06130 PF07724 AAA domain (Cdc48 subfamily) TCR_RS06130 PF10431 C-terminal, D2-small domain, of ClpB protein TCR_RS06130 PF06689 ClpX C4-type zinc finger TCR_RS06135 PF00004 ATPase family associated with various cellular activities (AAA) TCR_RS06135 PF05362 Lon protease (S16) C-terminal proteolytic domain TCR_RS06135 PF02190 ATP-dependent protease La (LON) substrate-binding domain TCR_RS06140 PF00216 Bacterial DNA-binding protein TCR_RS06170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TCR_RS06175 PF00528 Binding-protein-dependent transport system inner membrane component TCR_RS06180 PF12911 N-terminal TM domain of oligopeptide transport permease C TCR_RS06180 PF00528 Binding-protein-dependent transport system inner membrane component TCR_RS06185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TCR_RS06185 PF00005 ABC transporter TCR_RS06190 PF00391 PEP-utilising enzyme, mobile domain TCR_RS06190 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TCR_RS06190 PF02896 PEP-utilising enzyme, TIM barrel domain TCR_RS06205 PF13419 Haloacid dehalogenase-like hydrolase TCR_RS06215 PF03989 DNA gyrase C-terminal domain, beta-propeller TCR_RS06215 PF00521 DNA gyrase/topoisomerase IV, subunit A TCR_RS06220 PF00266 Aminotransferase class-V TCR_RS06225 PF00800 Prephenate dehydratase TCR_RS06225 PF01817 Chorismate mutase type II TCR_RS06225 PF01842 ACT domain TCR_RS06230 PF00155 Aminotransferase class I and II TCR_RS06235 PF01842 ACT domain TCR_RS06235 PF02153 Prephenate dehydrogenase TCR_RS06240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TCR_RS06245 PF02224 Cytidylate kinase TCR_RS06250 PF00575 S1 RNA binding domain TCR_RS06255 PF00216 Bacterial DNA-binding protein TCR_RS06265 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TCR_RS06275 PF00072 Response regulator receiver domain TCR_RS06285 PF04552 Sigma-54, DNA binding domain TCR_RS06285 PF04963 Sigma-54 factor, core binding domain TCR_RS06285 PF00309 Sigma-54 factor, Activator interacting domain (AID) TCR_RS06295 PF03960 ArsC family TCR_RS06305 PF13742 OB-fold nucleic acid binding domain TCR_RS06305 PF02601 Exonuclease VII, large subunit TCR_RS06310 PF01207 Dihydrouridine synthase (Dus) TCR_RS06320 PF04607 Region found in RelA / SpoT proteins TCR_RS06320 PF13291 ACT domain TCR_RS06320 PF02824 TGS domain TCR_RS06325 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TCR_RS06330 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain TCR_RS06330 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain TCR_RS06335 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TCR_RS06335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TCR_RS06360 PF00749 tRNA synthetases class I (E and Q), catalytic domain TCR_RS06375 PF01758 Sodium Bile acid symporter family TCR_RS06400 PF12833 Helix-turn-helix domain TCR_RS06400 PF02311 AraC-like ligand binding domain TCR_RS06410 PF00210 Ferritin-like domain TCR_RS06420 PF00849 RNA pseudouridylate synthase TCR_RS06420 PF01479 S4 domain TCR_RS06425 PF02163 Peptidase family M50 TCR_RS06430 PF01300 Telomere recombination TCR_RS06435 PF02811 PHP domain TCR_RS06440 PF04279 Intracellular septation protein A TCR_RS06445 PF03795 YCII-related domain TCR_RS06450 PF01726 LexA DNA binding domain TCR_RS06450 PF00717 Peptidase S24-like TCR_RS06455 PF17763 Glutaminase/Asparaginase C-terminal domain TCR_RS06455 PF00710 Asparaginase, N-terminal TCR_RS06470 PF04751 Protein of unknown function (DUF615) TCR_RS06475 PF12826 Helix-hairpin-helix motif TCR_RS06475 PF00533 BRCA1 C Terminus (BRCT) domain TCR_RS06475 PF01653 NAD-dependent DNA ligase adenylation domain TCR_RS06475 PF03120 NAD-dependent DNA ligase OB-fold domain TCR_RS06475 PF03119 NAD-dependent DNA ligase C4 zinc finger domain TCR_RS06480 PF04354 ZipA, C-terminal FtsZ-binding domain TCR_RS06485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TCR_RS06490 PF13419 Haloacid dehalogenase-like hydrolase TCR_RS06495 PF01258 Prokaryotic dksA/traR C4-type zinc finger TCR_RS06525 PF00291 Pyridoxal-phosphate dependent enzyme TCR_RS06535 PF01842 ACT domain TCR_RS06535 PF00742 Homoserine dehydrogenase TCR_RS06535 PF03447 Homoserine dehydrogenase, NAD binding domain TCR_RS06540 PF00155 Aminotransferase class I and II TCR_RS06545 PF04430 Protein of unknown function (DUF498/DUF598) TCR_RS06550 PF01551 Peptidase family M23 TCR_RS06550 PF01476 LysM domain TCR_RS06555 PF09335 SNARE associated Golgi protein TCR_RS06565 PF01975 Survival protein SurE TCR_RS06570 PF01713 Smr domain TCR_RS06575 PF04977 Septum formation initiator TCR_RS06580 PF00113 Enolase, C-terminal TIM barrel domain TCR_RS06580 PF03952 Enolase, N-terminal domain TCR_RS06585 PF00793 DAHP synthetase I family TCR_RS06590 PF06418 CTP synthase N-terminus TCR_RS06590 PF00117 Glutamine amidotransferase class-I TCR_RS06595 PF11734 TilS substrate C-terminal domain TCR_RS06595 PF01171 PP-loop family TCR_RS06600 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TCR_RS06605 PF18381 YcaO cyclodehydratase C-terminal domain TCR_RS06605 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding TCR_RS06620 PF00814 Glycoprotease family TCR_RS06625 PF06733 DEAD_2 TCR_RS06625 PF13307 Helicase C-terminal domain TCR_RS06630 PF00072 Response regulator receiver domain TCR_RS06630 PF01584 CheW-like domain TCR_RS06635 PF01351 Ribonuclease HII TCR_RS06640 PF02684 Lipid-A-disaccharide synthetase TCR_RS06645 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 TCR_RS06645 PF00132 Bacterial transferase hexapeptide (six repeats) TCR_RS06650 PF07977 FabA-like domain TCR_RS06655 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD TCR_RS06655 PF00132 Bacterial transferase hexapeptide (six repeats) TCR_RS06665 PF07244 Surface antigen variable number repeat TCR_RS06665 PF01103 Surface antigen TCR_RS06670 PF02163 Peptidase family M50 TCR_RS06670 PF17820 PDZ domain TCR_RS06680 PF01255 Putative undecaprenyl diphosphate synthase TCR_RS06685 PF01765 Ribosome recycling factor TCR_RS06690 PF00696 Amino acid kinase family TCR_RS06695 PF00889 Elongation factor TS TCR_RS06700 PF00318 Ribosomal protein S2 TCR_RS06705 PF00557 Metallopeptidase family M24 TCR_RS06710 PF01909 Nucleotidyltransferase domain TCR_RS06710 PF08335 GlnD PII-uridylyltransferase TCR_RS06710 PF01966 HD domain TCR_RS06720 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal TCR_RS06720 PF14602 Hexapeptide repeat of succinyl-transferase TCR_RS06720 PF00132 Bacterial transferase hexapeptide (six repeats) TCR_RS06725 PF03960 ArsC family TCR_RS06730 PF07687 Peptidase dimerisation domain TCR_RS06730 PF01546 Peptidase family M20/M25/M40 TCR_RS06745 PF00209 Sodium:neurotransmitter symporter family TCR_RS06750 PF01565 FAD binding domain TCR_RS06750 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TCR_RS06755 PF00924 Mechanosensitive ion channel TCR_RS06760 PF00933 Glycosyl hydrolase family 3 N terminal domain TCR_RS06770 PF12911 N-terminal TM domain of oligopeptide transport permease C TCR_RS06770 PF00528 Binding-protein-dependent transport system inner membrane component TCR_RS06775 PF00528 Binding-protein-dependent transport system inner membrane component TCR_RS06780 PF03734 L,D-transpeptidase catalytic domain TCR_RS06780 PF17969 L,D-transpeptidase C-terminal domain TCR_RS06790 PF09997 Predicted membrane protein (DUF2238) TCR_RS06805 PF01928 CYTH domain TCR_RS06810 PF00291 Pyridoxal-phosphate dependent enzyme TCR_RS06835 PF00037 4Fe-4S binding domain TCR_RS06840 PF16325 Peptidase family U32 C-terminal domain TCR_RS06840 PF01136 Peptidase family U32 TCR_RS06850 PF00919 Uncharacterized protein family UPF0004 TCR_RS06850 PF04055 Radical SAM superfamily TCR_RS06850 PF18693 TRAM domain TCR_RS06910 PF03653 Uncharacterised protein family (UPF0093) TCR_RS06915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TCR_RS06920 PF03692 Putative zinc- or iron-chelating domain TCR_RS06925 PF00849 RNA pseudouridylate synthase TCR_RS06935 PF07549 SecD/SecF GG Motif TCR_RS06935 PF02355 Protein export membrane protein TCR_RS06940 PF02355 Protein export membrane protein TCR_RS06940 PF13721 SecD export protein N-terminal TM region TCR_RS06940 PF07549 SecD/SecF GG Motif TCR_RS06945 PF02699 Preprotein translocase subunit TCR_RS06950 PF01702 Queuine tRNA-ribosyltransferase TCR_RS06955 PF02547 Queuosine biosynthesis protein TCR_RS06970 PF02028 BCCT, betaine/carnitine/choline family transporter TCR_RS06980 PF00543 Nitrogen regulatory protein P-II TCR_RS06985 PF00909 Ammonium Transporter Family TCR_RS06995 PF00117 Glutamine amidotransferase class-I TCR_RS06995 PF00958 GMP synthase C terminal domain TCR_RS06995 PF02540 NAD synthase TCR_RS07000 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TCR_RS07000 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TCR_RS07005 PF01645 Conserved region in glutamate synthase TCR_RS07010 PF01493 GXGXG motif TCR_RS07020 PF00120 Glutamine synthetase, catalytic domain TCR_RS07030 PF08669 Glycine cleavage T-protein C-terminal barrel domain TCR_RS07030 PF01571 Aminomethyltransferase folate-binding domain TCR_RS07030 PF07992 Pyridine nucleotide-disulphide oxidoreductase TCR_RS07030 PF17806 Sarcosine oxidase A3 domain TCR_RS07040 PF01266 FAD dependent oxidoreductase TCR_RS07045 PF01842 ACT domain TCR_RS07045 PF00551 Formyl transferase TCR_RS07065 PF05036 Sporulation related domain TCR_RS07075 PF02810 SEC-C motif TCR_RS07080 PF01554 MatE TCR_RS07090 PF00293 NUDIX domain TCR_RS07095 PF01168 Alanine racemase, N-terminal domain TCR_RS07095 PF00842 Alanine racemase, C-terminal domain TCR_RS07100 PF00772 DnaB-like helicase N terminal domain TCR_RS07100 PF03796 DnaB-like helicase C terminal domain TCR_RS07105 PF03948 Ribosomal protein L9, C-terminal domain TCR_RS07105 PF01281 Ribosomal protein L9, N-terminal domain TCR_RS07115 PF01084 Ribosomal protein S18 TCR_RS07120 PF01250 Ribosomal protein S6 TCR_RS07125 PF00258 Flavodoxin TCR_RS07130 PF01510 N-acetylmuramoyl-L-alanine amidase TCR_RS07135 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TCR_RS07135 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TCR_RS07140 PF02080 TrkA-C domain TCR_RS07140 PF02254 TrkA-N domain TCR_RS07140 PF00999 Sodium/hydrogen exchanger family TCR_RS07145 PF02578 Multi-copper polyphenol oxidoreductase laccase TCR_RS07150 PF01479 S4 domain TCR_RS07150 PF00849 RNA pseudouridylate synthase TCR_RS07155 PF13525 Outer membrane lipoprotein TCR_RS07160 PF02540 NAD synthase TCR_RS07160 PF00795 Carbon-nitrogen hydrolase TCR_RS07165 PF02629 CoA binding domain TCR_RS07165 PF00549 CoA-ligase TCR_RS07170 PF08442 ATP-grasp domain TCR_RS07170 PF00549 CoA-ligase TCR_RS07180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TCR_RS07185 PF17158 Membrane-associated sensor, integral membrane domain TCR_RS07185 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS07200 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TCR_RS07200 PF12557 Cob(I)alamin adenosyltransferase N terminal TCR_RS07210 PF00072 Response regulator receiver domain TCR_RS07210 PF00196 Bacterial regulatory proteins, luxR family TCR_RS07215 PF00072 Response regulator receiver domain TCR_RS07215 PF09308 LuxQ, periplasmic TCR_RS07215 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS07215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS07220 PF00206 Lyase TCR_RS07220 PF10415 Fumarase C C-terminus TCR_RS07225 PF00085 Thioredoxin TCR_RS07235 PF10417 C-terminal domain of 1-Cys peroxiredoxin TCR_RS07235 PF00578 AhpC/TSA family TCR_RS07240 PF00348 Polyprenyl synthetase TCR_RS07245 PF01242 6-pyruvoyl tetrahydropterin synthase TCR_RS07255 PF06750 Bacterial Peptidase A24 N-terminal domain TCR_RS07255 PF01478 Type IV leader peptidase family TCR_RS07265 PF00793 DAHP synthetase I family TCR_RS07270 PF00672 HAMP domain TCR_RS07270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS07270 PF02203 Tar ligand binding domain homologue TCR_RS07275 PF00586 AIR synthase related protein, N-terminal domain TCR_RS07275 PF02769 AIR synthase related protein, C-terminal domain TCR_RS07280 PF01029 NusB family TCR_RS07285 PF00885 6,7-dimethyl-8-ribityllumazine synthase TCR_RS07290 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TCR_RS07290 PF00925 GTP cyclohydrolase II TCR_RS07295 PF00677 Lumazine binding domain TCR_RS07300 PF01872 RibD C-terminal domain TCR_RS07300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TCR_RS07305 PF03477 ATP cone domain TCR_RS07310 PF00464 Serine hydroxymethyltransferase TCR_RS07315 PF12848 ABC transporter TCR_RS07315 PF00005 ABC transporter TCR_RS07320 PF00563 EAL domain TCR_RS07320 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS07320 PF03707 Bacterial signalling protein N terminal repeat TCR_RS07325 PF01475 Ferric uptake regulator family TCR_RS07330 PF04355 SmpA / OmlA family TCR_RS07335 PF03658 RnfH family Ubiquitin TCR_RS07340 PF03364 Polyketide cyclase / dehydrase and lipid transport TCR_RS07345 PF01668 SmpB protein TCR_RS07350 PF14659 Phage integrase, N-terminal SAM-like domain TCR_RS07350 PF13356 Arm DNA-binding domain TCR_RS07350 PF00589 Phage integrase family TCR_RS07370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TCR_RS07380 PF03480 Bacterial extracellular solute-binding protein, family 7 TCR_RS07390 PF01037 Lrp/AsnC ligand binding domain TCR_RS07390 PF13404 AsnC-type helix-turn-helix domain TCR_RS07445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TCR_RS07450 PF00873 AcrB/AcrD/AcrF family TCR_RS07455 PF16916 Dimerisation domain of Zinc Transporter TCR_RS07455 PF01545 Cation efflux family TCR_RS07480 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TCR_RS07485 PF02154 Flagellar motor switch protein FliM TCR_RS07485 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TCR_RS07495 PF00691 OmpA family TCR_RS07495 PF13677 Membrane MotB of proton-channel complex MotA/MotB TCR_RS07500 PF01618 MotA/TolQ/ExbB proton channel family TCR_RS07505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS07520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TCR_RS07520 PF18269 T3SS EscN ATPase C-terminal domain TCR_RS07530 PF01706 FliG C-terminal domain TCR_RS07530 PF14842 FliG N-terminal domain TCR_RS07530 PF14841 FliG middle domain TCR_RS07535 PF08345 Flagellar M-ring protein C-terminal TCR_RS07535 PF01514 Secretory protein of YscJ/FliF family TCR_RS07540 PF02049 Flagellar hook-basal body complex protein FliE TCR_RS07545 PF02954 Bacterial regulatory protein, Fis family TCR_RS07545 PF00072 Response regulator receiver domain TCR_RS07545 PF00158 Sigma-54 interaction domain TCR_RS07550 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS07550 PF13188 PAS domain TCR_RS07550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS07555 PF02954 Bacterial regulatory protein, Fis family TCR_RS07555 PF06490 Flagellar regulatory protein FleQ TCR_RS07555 PF00158 Sigma-54 interaction domain TCR_RS07565 PF02561 Flagellar protein FliS TCR_RS07570 PF07196 Flagellin hook IN motif TCR_RS07570 PF02465 Flagellar hook-associated protein 2 N-terminus TCR_RS07570 PF07195 Flagellar hook-associated protein 2 C-terminus TCR_RS07585 PF00700 Bacterial flagellin C-terminal helical region TCR_RS07585 PF00669 Bacterial flagellin N-terminal helical region TCR_RS07590 PF00669 Bacterial flagellin N-terminal helical region TCR_RS07590 PF00700 Bacterial flagellin C-terminal helical region TCR_RS07600 PF02348 Cytidylyltransferase TCR_RS07605 PF00483 Nucleotidyl transferase TCR_RS07610 PF02350 UDP-N-acetylglucosamine 2-epimerase TCR_RS07615 PF03102 NeuB family TCR_RS07615 PF08666 SAF domain TCR_RS07630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TCR_RS07635 PF01370 NAD dependent epimerase/dehydratase family TCR_RS07640 PF01464 Transglycosylase SLT domain TCR_RS07640 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain TCR_RS07645 PF00669 Bacterial flagellin N-terminal helical region TCR_RS07645 PF00460 Flagella basal body rod protein TCR_RS07645 PF00700 Bacterial flagellin C-terminal helical region TCR_RS07650 PF07196 Flagellin hook IN motif TCR_RS07650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TCR_RS07655 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TCR_RS07655 PF10135 Rod binding protein TCR_RS07660 PF02119 Flagellar P-ring protein TCR_RS07665 PF02107 Flagellar L-ring protein TCR_RS07670 PF00460 Flagella basal body rod protein TCR_RS07670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TCR_RS07675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TCR_RS07675 PF00460 Flagella basal body rod protein TCR_RS07680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TCR_RS07680 PF00460 Flagella basal body rod protein TCR_RS07680 PF07559 Flagellar basal body protein FlaE TCR_RS07685 PF03963 Flagellar hook capping protein - N-terminal region TCR_RS07690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TCR_RS07690 PF00460 Flagella basal body rod protein TCR_RS07695 PF00460 Flagella basal body rod protein TCR_RS07705 PF00072 Response regulator receiver domain TCR_RS07705 PF01584 CheW-like domain TCR_RS07755 PF01433 Peptidase family M1 domain TCR_RS07755 PF17432 Domain of unknown function (DUF3458_C) ARM repeats TCR_RS07755 PF11940 Domain of unknown function (DUF3458) Ig-like fold TCR_RS07760 PF00691 OmpA family TCR_RS07765 PF13545 Crp-like helix-turn-helix domain TCR_RS07765 PF00027 Cyclic nucleotide-binding domain TCR_RS07775 PF08032 RNA 2'-O ribose methyltransferase substrate binding TCR_RS07775 PF00588 SpoU rRNA Methylase family TCR_RS07780 PF17876 Cold shock domain TCR_RS07780 PF08206 Ribonuclease B OB domain TCR_RS07780 PF00773 RNB domain TCR_RS07780 PF08461 Ribonuclease R winged-helix domain TCR_RS07780 PF00575 S1 RNA binding domain TCR_RS07785 PF07992 Pyridine nucleotide-disulphide oxidoreductase TCR_RS07785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TCR_RS07790 PF01464 Transglycosylase SLT domain TCR_RS07790 PF00497 Bacterial extracellular solute-binding proteins, family 3 TCR_RS07795 PF02926 THUMP domain TCR_RS07795 PF02568 Thiamine biosynthesis protein (ThiI) TCR_RS07805 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain TCR_RS07810 PF00719 Inorganic pyrophosphatase TCR_RS07815 PF03710 Glutamate-ammonia ligase adenylyltransferase TCR_RS07815 PF08335 GlnD PII-uridylyltransferase TCR_RS07825 PF00543 Nitrogen regulatory protein P-II TCR_RS07830 PF00909 Ammonium Transporter Family TCR_RS07840 PF00700 Bacterial flagellin C-terminal helical region TCR_RS07840 PF00669 Bacterial flagellin N-terminal helical region TCR_RS07845 PF10458 Valyl tRNA synthetase tRNA binding arm TCR_RS07845 PF00133 tRNA synthetases class I (I, L, M and V) TCR_RS07845 PF08264 Anticodon-binding domain of tRNA TCR_RS07850 PF08239 Bacterial SH3 domain TCR_RS07885 PF00575 S1 RNA binding domain TCR_RS07885 PF10150 Ribonuclease E/G family TCR_RS07890 PF02545 Maf-like protein TCR_RS07900 PF01370 NAD dependent epimerase/dehydratase family TCR_RS07905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TCR_RS07905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TCR_RS07905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TCR_RS07910 PF04932 O-Antigen ligase TCR_RS07925 PF05159 Capsule polysaccharide biosynthesis protein TCR_RS07935 PF01075 Glycosyltransferase family 9 (heptosyltransferase) TCR_RS07940 PF01370 NAD dependent epimerase/dehydratase family TCR_RS07950 PF00005 ABC transporter TCR_RS07950 PF00664 ABC transporter transmembrane region TCR_RS07955 PF03279 Bacterial lipid A biosynthesis acyltransferase TCR_RS07960 PF00311 Phosphoenolpyruvate carboxylase TCR_RS07965 PF02261 Aspartate decarboxylase TCR_RS07970 PF00691 OmpA family TCR_RS07970 PF13677 Membrane MotB of proton-channel complex MotA/MotB TCR_RS07975 PF01618 MotA/TolQ/ExbB proton channel family TCR_RS07980 PF02569 Pantoate-beta-alanine ligase TCR_RS07985 PF02548 Ketopantoate hydroxymethyltransferase TCR_RS07990 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TCR_RS07995 PF12627 Probable RNA and SrmB- binding site of polymerase A TCR_RS07995 PF12626 Polymerase A arginine-rich C-terminus TCR_RS07995 PF01743 Poly A polymerase head domain TCR_RS08005 PF00579 tRNA synthetases class I (W and Y) TCR_RS08010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TCR_RS08010 PF00529 HlyD membrane-fusion protein of T1SS TCR_RS08015 PF00873 AcrB/AcrD/AcrF family TCR_RS08020 PF01740 STAS domain TCR_RS08020 PF00916 Sulfate permease family TCR_RS08025 PF06865 Pyrimidine/purine nucleoside phosphorylase TCR_RS08035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TCR_RS08040 PF12832 MFS_1 like family TCR_RS08045 PF01264 Chorismate synthase TCR_RS08060 PF00248 Aldo/keto reductase family TCR_RS08065 PF00155 Aminotransferase class I and II TCR_RS08070 PF03781 Sulfatase-modifying factor enzyme 1 TCR_RS08070 PF12867 DinB superfamily TCR_RS08080 PF00194 Eukaryotic-type carbonic anhydrase TCR_RS08085 PF05175 Methyltransferase small domain TCR_RS08090 PF00994 Probable molybdopterin binding domain TCR_RS08095 PF00004 ATPase family associated with various cellular activities (AAA) TCR_RS08095 PF02190 ATP-dependent protease La (LON) substrate-binding domain TCR_RS08095 PF05362 Lon protease (S16) C-terminal proteolytic domain TCR_RS08105 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal TCR_RS08105 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TCR_RS08105 PF02769 AIR synthase related protein, C-terminal domain TCR_RS08115 PF00701 Dihydrodipicolinate synthetase family TCR_RS08120 PF00578 AhpC/TSA family TCR_RS08125 PF02562 PhoH-like protein TCR_RS08125 PF13638 PIN domain TCR_RS08130 PF03466 LysR substrate binding domain TCR_RS08130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TCR_RS08135 PF00027 Cyclic nucleotide-binding domain TCR_RS08135 PF00520 Ion transport protein TCR_RS08140 PF01494 FAD binding domain TCR_RS08145 PF01494 FAD binding domain TCR_RS08150 PF05195 Aminopeptidase P, N-terminal domain TCR_RS08150 PF00557 Metallopeptidase family M24 TCR_RS08155 PF03695 Uncharacterised protein family (UPF0149) TCR_RS08165 PF01812 5-formyltetrahydrofolate cyclo-ligase family TCR_RS08170 PF00291 Pyridoxal-phosphate dependent enzyme TCR_RS08170 PF00585 C-terminal regulatory domain of Threonine dehydratase TCR_RS08180 PF02630 SCO1/SenC TCR_RS08195 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TCR_RS08200 PF00578 AhpC/TSA family TCR_RS08205 PF00202 Aminotransferase class-III TCR_RS08210 PF04315 Elongation factor P hydroxylase TCR_RS08220 PF07731 Multicopper oxidase TCR_RS08220 PF00394 Multicopper oxidase TCR_RS08220 PF07732 Multicopper oxidase TCR_RS08225 PF05275 Copper resistance protein B precursor (CopB) TCR_RS08235 PF07731 Multicopper oxidase TCR_RS08235 PF07732 Multicopper oxidase TCR_RS08270 PF08245 Mur ligase middle domain TCR_RS08270 PF02875 Mur ligase family, glutamate ligase domain TCR_RS08270 PF01225 Mur ligase family, catalytic domain TCR_RS08275 PF00570 HRDC domain TCR_RS08275 PF01612 3'-5' exonuclease TCR_RS08280 PF00365 Phosphofructokinase TCR_RS08285 PF05552 Conserved TM helix TCR_RS08285 PF00924 Mechanosensitive ion channel TCR_RS08295 PF01618 MotA/TolQ/ExbB proton channel family TCR_RS08300 PF13677 Membrane MotB of proton-channel complex MotA/MotB TCR_RS08300 PF00691 OmpA family TCR_RS08310 PF02599 Global regulator protein family TCR_RS08315 PF00696 Amino acid kinase family TCR_RS08315 PF01842 ACT domain TCR_RS08315 PF13840 ACT domain TCR_RS08320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TCR_RS08320 PF01411 tRNA synthetases class II (A) TCR_RS08320 PF02272 DHHA1 domain TCR_RS08325 PF02631 RecX family TCR_RS08330 PF00154 recA bacterial DNA recombination protein TCR_RS08335 PF02464 Competence-damaged protein TCR_RS08340 PF01624 MutS domain I TCR_RS08340 PF05188 MutS domain II TCR_RS08340 PF05192 MutS domain III TCR_RS08340 PF05190 MutS family domain IV TCR_RS08340 PF00488 MutS domain V TCR_RS08345 PF00085 Thioredoxin TCR_RS08355 PF02951 Prokaryotic glutathione synthetase, N-terminal domain TCR_RS08355 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain TCR_RS08365 PF01219 Prokaryotic diacylglycerol kinase TCR_RS08375 PF13439 Glycosyltransferase Family 4 TCR_RS08375 PF00534 Glycosyl transferases group 1 TCR_RS08385 PF13439 Glycosyltransferase Family 4 TCR_RS08385 PF00534 Glycosyl transferases group 1 TCR_RS08400 PF12848 ABC transporter TCR_RS08400 PF00005 ABC transporter TCR_RS08405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TCR_RS08405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TCR_RS08410 PF05922 Peptidase inhibitor I9 TCR_RS08410 PF00082 Subtilase family TCR_RS08415 PF00183 Hsp90 protein TCR_RS08430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS08430 PF01584 CheW-like domain TCR_RS08430 PF02895 Signal transducing histidine kinase, homodimeric domain TCR_RS08430 PF01627 Hpt domain TCR_RS08435 PF03975 CheD chemotactic sensory transduction TCR_RS08440 PF14437 MafB19-like deaminase TCR_RS08445 PF00117 Glutamine amidotransferase class-I TCR_RS08445 PF00958 GMP synthase C terminal domain TCR_RS08445 PF02540 NAD synthase TCR_RS08450 PF00478 IMP dehydrogenase / GMP reductase domain TCR_RS08450 PF00571 CBS domain TCR_RS08475 PF00753 Metallo-beta-lactamase superfamily TCR_RS08480 PF01618 MotA/TolQ/ExbB proton channel family TCR_RS08485 PF02472 Biopolymer transport protein ExbD/TolR TCR_RS08495 PF02657 Fe-S metabolism associated domain TCR_RS08500 PF01435 Peptidase family M48 TCR_RS08505 PF02637 GatB domain TCR_RS08505 PF02934 GatB/GatE catalytic domain TCR_RS08510 PF01425 Amidase TCR_RS08515 PF02686 Glu-tRNAGln amidotransferase C subunit TCR_RS08525 PF04085 rod shape-determining protein MreC TCR_RS08535 PF03717 Penicillin-binding Protein dimerisation domain TCR_RS08535 PF00905 Penicillin binding protein transpeptidase domain TCR_RS08540 PF01098 Cell cycle protein TCR_RS08545 PF07943 Penicillin-binding protein 5, C-terminal domain TCR_RS08545 PF00768 D-alanyl-D-alanine carboxypeptidase TCR_RS08550 PF01063 Amino-transferase class IV TCR_RS08555 PF04359 Protein of unknown function (DUF493) TCR_RS08560 PF03099 Biotin/lipoate A/B protein ligase family TCR_RS08565 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family TCR_RS08565 PF04055 Radical SAM superfamily TCR_RS08575 PF01527 Transposase TCR_RS08580 PF00665 Integrase core domain TCR_RS08585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS08585 PF00183 Hsp90 protein TCR_RS08615 PF01430 Hsp33 protein TCR_RS08620 PF03883 Peroxide stress protein YaaA TCR_RS08630 PF00483 Nucleotidyl transferase TCR_RS08635 PF01636 Phosphotransferase enzyme family TCR_RS08640 PF03968 OstA-like protein TCR_RS08640 PF04453 LPS transport system D TCR_RS08645 PF09312 SurA N-terminal domain TCR_RS08645 PF00639 PPIC-type PPIASE domain TCR_RS08650 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TCR_RS08655 PF00398 Ribosomal RNA adenine dimethylase TCR_RS08660 PF00149 Calcineurin-like phosphoesterase TCR_RS08675 PF00216 Bacterial DNA-binding protein TCR_RS08680 PF03483 B3/4 domain TCR_RS08680 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TCR_RS08680 PF01588 Putative tRNA binding domain TCR_RS08680 PF03484 tRNA synthetase B5 domain TCR_RS08680 PF03147 Ferredoxin-fold anticodon binding domain TCR_RS08685 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TCR_RS08685 PF01409 tRNA synthetases class II core domain (F) TCR_RS08690 PF00453 Ribosomal protein L20 TCR_RS08695 PF01632 Ribosomal protein L35 TCR_RS08700 PF00707 Translation initiation factor IF-3, C-terminal domain TCR_RS08700 PF05198 Translation initiation factor IF-3, N-terminal domain TCR_RS08705 PF02824 TGS domain TCR_RS08705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TCR_RS08705 PF03129 Anticodon binding domain TCR_RS08705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TCR_RS08730 PF01068 ATP dependent DNA ligase domain TCR_RS08730 PF14743 DNA ligase OB-like domain TCR_RS08745 PF02397 Bacterial sugar transferase TCR_RS08755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TCR_RS08755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TCR_RS08755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TCR_RS08755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TCR_RS08760 PF00483 Nucleotidyl transferase TCR_RS08760 PF01050 Mannose-6-phosphate isomerase TCR_RS08765 PF01370 NAD dependent epimerase/dehydratase family TCR_RS08770 PF16363 GDP-mannose 4,6 dehydratase TCR_RS08775 PF13439 Glycosyltransferase Family 4 TCR_RS08775 PF00534 Glycosyl transferases group 1 TCR_RS08790 PF00535 Glycosyl transferase family 2 TCR_RS08800 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TCR_RS08805 PF01370 NAD dependent epimerase/dehydratase family TCR_RS08810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TCR_RS08815 PF16363 GDP-mannose 4,6 dehydratase TCR_RS08820 PF00483 Nucleotidyl transferase TCR_RS08825 PF00175 Oxidoreductase NAD-binding domain TCR_RS08825 PF00111 2Fe-2S iron-sulfur cluster binding domain TCR_RS08825 PF00970 Oxidoreductase FAD-binding domain TCR_RS08830 PF01380 SIS domain TCR_RS08835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TCR_RS08845 PF02021 Uncharacterised protein family UPF0102 TCR_RS08855 PF12705 PD-(D/E)XK nuclease superfamily TCR_RS08855 PF13361 UvrD-like helicase C-terminal domain TCR_RS08855 PF00580 UvrD/REP helicase N-terminal domain TCR_RS08880 PF00440 Bacterial regulatory proteins, tetR family TCR_RS08885 PF00873 AcrB/AcrD/AcrF family TCR_RS08895 PF08713 DNA alkylation repair enzyme TCR_RS08910 PF00849 RNA pseudouridylate synthase TCR_RS08915 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TCR_RS08915 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TCR_RS08915 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TCR_RS08920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TCR_RS08940 PF00582 Universal stress protein family TCR_RS08960 PF01070 FMN-dependent dehydrogenase TCR_RS08965 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal TCR_RS08965 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal TCR_RS09000 PF00437 Type II/IV secretion system protein TCR_RS09010 PF00263 Bacterial type II and III secretion system protein TCR_RS09010 PF04972 BON domain TCR_RS09010 PF13629 Pilus formation protein N terminal region TCR_RS09060 PF00535 Glycosyl transferase family 2 TCR_RS09065 PF04386 Stringent starvation protein B TCR_RS09070 PF02798 Glutathione S-transferase, N-terminal domain TCR_RS09070 PF00043 Glutathione S-transferase, C-terminal domain TCR_RS09075 PF00152 tRNA synthetases class II (D, K and N) TCR_RS09080 PF09285 Elongation factor P, C-terminal TCR_RS09080 PF08207 Elongation factor P (EF-P) KOW-like domain TCR_RS09080 PF01132 Elongation factor P (EF-P) OB domain TCR_RS09085 PF04055 Radical SAM superfamily TCR_RS09105 PF03739 Lipopolysaccharide export system permease LptF/LptG TCR_RS09110 PF03739 Lipopolysaccharide export system permease LptF/LptG TCR_RS09115 PF02789 Cytosol aminopeptidase family, N-terminal domain TCR_RS09115 PF00883 Cytosol aminopeptidase family, catalytic domain TCR_RS09125 PF00437 Type II/IV secretion system protein TCR_RS09145 PF17757 UvrB interaction domain TCR_RS09145 PF04851 Type III restriction enzyme, res subunit TCR_RS09145 PF02151 UvrB/uvrC motif TCR_RS09145 PF00271 Helicase conserved C-terminal domain TCR_RS09145 PF12344 Ultra-violet resistance protein B TCR_RS09150 PF00155 Aminotransferase class I and II TCR_RS09155 PF00293 NUDIX domain TCR_RS09160 PF13419 Haloacid dehalogenase-like hydrolase TCR_RS09165 PF05724 Thiopurine S-methyltransferase (TPMT) TCR_RS09180 PF12848 ABC transporter TCR_RS09180 PF00005 ABC transporter TCR_RS09180 PF16326 ABC transporter C-terminal domain TCR_RS09190 PF00268 Ribonucleotide reductase, small chain TCR_RS09230 PF04542 Sigma-70 region 2 TCR_RS09230 PF08281 Sigma-70, region 4 TCR_RS09235 PF03631 Virulence factor BrkB TCR_RS09240 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS09240 PF03707 Bacterial signalling protein N terminal repeat TCR_RS09240 PF00563 EAL domain TCR_RS09250 PF05114 Protein of unknown function (DUF692) TCR_RS09265 PF00873 AcrB/AcrD/AcrF family TCR_RS09270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TCR_RS09280 PF01965 DJ-1/PfpI family TCR_RS09285 PF03572 Peptidase family S41 TCR_RS09285 PF13180 PDZ domain TCR_RS09290 PF01022 Bacterial regulatory protein, arsR family TCR_RS09330 PF00850 Histone deacetylase domain TCR_RS09340 PF00528 Binding-protein-dependent transport system inner membrane component TCR_RS09345 PF00005 ABC transporter TCR_RS09360 PF09347 Domain of unknown function (DUF1989) TCR_RS09365 PF02785 Biotin carboxylase C-terminal domain TCR_RS09365 PF00289 Biotin carboxylase, N-terminal domain TCR_RS09365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TCR_RS09370 PF01425 Amidase TCR_RS09375 PF00862 Sucrose synthase TCR_RS09375 PF00534 Glycosyl transferases group 1 TCR_RS09380 PF05166 YcgL domain TCR_RS09380 PF05116 Sucrose-6F-phosphate phosphohydrolase TCR_RS09385 PF00294 pfkB family carbohydrate kinase TCR_RS09385 PF01467 Cytidylyltransferase-like TCR_RS09390 PF00128 Alpha amylase, catalytic domain TCR_RS09395 PF00120 Glutamine synthetase, catalytic domain TCR_RS09400 PF02633 Creatinine amidohydrolase TCR_RS09405 PF00497 Bacterial extracellular solute-binding proteins, family 3 TCR_RS09420 PF00753 Metallo-beta-lactamase superfamily TCR_RS09440 PF04546 Sigma-70, non-essential region TCR_RS09440 PF04539 Sigma-70 region 3 TCR_RS09440 PF03979 Sigma-70 factor, region 1.1 TCR_RS09440 PF04542 Sigma-70 region 2 TCR_RS09440 PF00140 Sigma-70 factor, region 1.2 TCR_RS09440 PF04545 Sigma-70, region 4 TCR_RS09445 PF08275 DNA primase catalytic core, N-terminal domain TCR_RS09445 PF01807 CHC2 zinc finger TCR_RS09445 PF13662 Toprim domain TCR_RS09445 PF08278 DNA primase DnaG DnaB-binding TCR_RS09445 PF10410 DnaB-helicase binding domain of primase TCR_RS09455 PF01165 Ribosomal protein S21 TCR_RS09460 PF00814 Glycoprotease family TCR_RS09465 PF02660 Glycerol-3-phosphate acyltransferase TCR_RS09470 PF02152 Dihydroneopterin aldolase TCR_RS09490 PF02673 Bacitracin resistance protein BacA TCR_RS09495 PF03853 YjeF-related protein N-terminus TCR_RS09495 PF01256 Carbohydrate kinase TCR_RS09500 PF02222 ATP-grasp domain TCR_RS09500 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain TCR_RS09505 PF00731 AIR carboxylase TCR_RS09510 PF00563 EAL domain TCR_RS09510 PF12792 CSS motif domain associated with EAL TCR_RS09515 PF00438 S-adenosylmethionine synthetase, N-terminal domain TCR_RS09515 PF02773 S-adenosylmethionine synthetase, C-terminal domain TCR_RS09515 PF02772 S-adenosylmethionine synthetase, central domain TCR_RS09520 PF02219 Methylenetetrahydrofolate reductase TCR_RS09525 PF04452 RNA methyltransferase TCR_RS09535 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain TCR_RS09535 PF02951 Prokaryotic glutathione synthetase, N-terminal domain TCR_RS09540 PF02424 ApbE family TCR_RS09545 PF02622 Uncharacterized ACR, COG1678 TCR_RS09550 PF03652 Holliday junction resolvase TCR_RS09555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TCR_RS09555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TCR_RS09560 PF01979 Amidohydrolase family TCR_RS09575 PF03976 Polyphosphate kinase 2 (PPK2) TCR_RS09580 PF01168 Alanine racemase, N-terminal domain TCR_RS09590 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TCR_RS09590 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TCR_RS09595 PF14748 Pyrroline-5-carboxylate reductase dimerisation TCR_RS09595 PF03807 NADP oxidoreductase coenzyme F420-dependent TCR_RS09600 PF02325 YGGT family TCR_RS09605 PF00561 alpha/beta hydrolase fold TCR_RS09610 PF07021 Methionine biosynthesis protein MetW TCR_RS09610 PF00561 alpha/beta hydrolase fold TCR_RS09615 PF07664 Ferrous iron transport protein B C terminus TCR_RS09615 PF02421 Ferrous iron transport protein B TCR_RS09615 PF07670 Nucleoside recognition TCR_RS09640 PF02230 Phospholipase/Carboxylesterase TCR_RS09650 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TCR_RS09650 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TCR_RS09660 PF10672 S-adenosylmethionine-dependent methyltransferase TCR_RS09660 PF17785 PUA-like domain TCR_RS09665 PF01597 Glycine cleavage H-protein TCR_RS09675 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS09675 PF00072 Response regulator receiver domain TCR_RS09680 PF00665 Integrase core domain TCR_RS09685 PF01527 Transposase TCR_RS09700 PF00873 AcrB/AcrD/AcrF family TCR_RS09710 PF01527 Transposase TCR_RS09715 PF00665 Integrase core domain TCR_RS09735 PF00313 'Cold-shock' DNA-binding domain TCR_RS09745 PF00762 Ferrochelatase TCR_RS09770 PF03773 Predicted permease TCR_RS09785 PF06039 Malate:quinone oxidoreductase (Mqo) TCR_RS09790 PF02492 CobW/HypB/UreG, nucleotide-binding domain TCR_RS09790 PF07683 Cobalamin synthesis protein cobW C-terminal domain TCR_RS09795 PF02649 Type I GTP cyclohydrolase folE2 TCR_RS09805 PF01037 Lrp/AsnC ligand binding domain TCR_RS09810 PF00682 HMGL-like TCR_RS09810 PF08502 LeuA allosteric (dimerisation) domain TCR_RS09815 PF00085 Thioredoxin TCR_RS09825 PF01594 AI-2E family transporter TCR_RS09830 PF11892 Domain of unknown function (DUF3412) TCR_RS09830 PF03641 Possible lysine decarboxylase TCR_RS09830 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases TCR_RS09835 PF00271 Helicase conserved C-terminal domain TCR_RS09835 PF00270 DEAD/DEAH box helicase TCR_RS09840 PF00440 Bacterial regulatory proteins, tetR family TCR_RS09840 PF18665 Tetracyclin repressor-like, C-terminal domain TCR_RS09855 PF00171 Aldehyde dehydrogenase family TCR_RS09865 PF01979 Amidohydrolase family TCR_RS09870 PF01809 Putative membrane protein insertion efficiency factor TCR_RS09875 PF02503 Polyphosphate kinase middle domain TCR_RS09875 PF17941 Polyphosphate kinase C-terminal domain 1 TCR_RS09875 PF13089 Polyphosphate kinase N-terminal domain TCR_RS09875 PF13090 Polyphosphate kinase C-terminal domain 2 TCR_RS09880 PF02541 Ppx/GppA phosphatase family TCR_RS09885 PF00258 Flavodoxin TCR_RS09885 PF00175 Oxidoreductase NAD-binding domain TCR_RS09885 PF00667 FAD binding domain TCR_RS09895 PF00156 Phosphoribosyl transferase domain TCR_RS09900 PF00300 Histidine phosphatase superfamily (branch 1) TCR_RS09905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS09905 PF08447 PAS fold TCR_RS09905 PF08447 PAS fold TCR_RS09905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS09915 PF00696 Amino acid kinase family TCR_RS09930 PF04461 Protein of unknown function (DUF520) TCR_RS09935 PF00155 Aminotransferase class I and II TCR_RS09945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TCR_RS09945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TCR_RS09945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TCR_RS09945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TCR_RS09950 PF00692 dUTPase TCR_RS09965 PF02028 BCCT, betaine/carnitine/choline family transporter TCR_RS09975 PF00072 Response regulator receiver domain TCR_RS09985 PF09308 LuxQ, periplasmic TCR_RS09985 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS09985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS09985 PF00072 Response regulator receiver domain TCR_RS09995 PF04127 DNA / pantothenate metabolism flavoprotein TCR_RS09995 PF02441 Flavoprotein TCR_RS10005 PF04002 RadC-like JAB domain TCR_RS10010 PF00830 Ribosomal L28 family TCR_RS10015 PF00471 Ribosomal protein L33 TCR_RS10020 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS10030 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain TCR_RS10030 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain TCR_RS10030 PF06827 Zinc finger found in FPG and IleRS TCR_RS10040 PF00689 Cation transporting ATPase, C-terminus TCR_RS10040 PF00690 Cation transporter/ATPase, N-terminus TCR_RS10045 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS10045 PF01627 Hpt domain TCR_RS10045 PF00072 Response regulator receiver domain TCR_RS10045 PF17149 Periplasmic sensor domain found in signal transduction proteins TCR_RS10045 PF00672 HAMP domain TCR_RS10045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS10050 PF00005 ABC transporter TCR_RS10050 PF03459 TOBE domain TCR_RS10055 PF00528 Binding-protein-dependent transport system inner membrane component TCR_RS10065 PF03459 TOBE domain TCR_RS10065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TCR_RS10075 PF01467 Cytidylyltransferase-like TCR_RS10110 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS10110 PF00072 Response regulator receiver domain TCR_RS10115 PF04172 LrgB-like family TCR_RS10120 PF03788 LrgA family TCR_RS10125 PF05193 Peptidase M16 inactive domain TCR_RS10130 PF05193 Peptidase M16 inactive domain TCR_RS10130 PF00675 Insulinase (Peptidase family M16) TCR_RS10135 PF00448 SRP54-type protein, GTPase domain TCR_RS10135 PF02881 SRP54-type protein, helical bundle domain TCR_RS10150 PF00109 Beta-ketoacyl synthase, N-terminal domain TCR_RS10150 PF02801 Beta-ketoacyl synthase, C-terminal domain TCR_RS10155 PF07977 FabA-like domain TCR_RS10165 PF03309 Type III pantothenate kinase TCR_RS10170 PF03099 Biotin/lipoate A/B protein ligase family TCR_RS10170 PF02237 Biotin protein ligase C terminal domain TCR_RS10200 PF00579 tRNA synthetases class I (W and Y) TCR_RS10200 PF01479 S4 domain TCR_RS10205 PF01180 Dihydroorotate dehydrogenase TCR_RS10210 PF00588 SpoU rRNA Methylase family TCR_RS10215 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TCR_RS10215 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TCR_RS10220 PF02556 Preprotein translocase subunit SecB TCR_RS10225 PF00462 Glutaredoxin TCR_RS10230 PF00581 Rhodanese-like domain TCR_RS10230 PF11127 Protein of unknown function (DUF2892) TCR_RS10235 PF01676 Metalloenzyme superfamily TCR_RS10235 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TCR_RS10240 PF01493 GXGXG motif TCR_RS10240 PF04898 Glutamate synthase central domain TCR_RS10240 PF00310 Glutamine amidotransferases class-II TCR_RS10240 PF01645 Conserved region in glutamate synthase TCR_RS10245 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TCR_RS10245 PF07992 Pyridine nucleotide-disulphide oxidoreductase TCR_RS10255 PF00403 Heavy-metal-associated domain TCR_RS10265 PF13746 4Fe-4S dicluster domain TCR_RS10265 PF12801 4Fe-4S binding domain TCR_RS10265 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase TCR_RS10270 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TCR_RS10270 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP TCR_RS10285 PF00115 Cytochrome C and Quinol oxidase polypeptide I TCR_RS10290 PF00475 Imidazoleglycerol-phosphate dehydratase TCR_RS10295 PF00117 Glutamine amidotransferase class-I TCR_RS10300 PF00977 Histidine biosynthesis protein TCR_RS10305 PF00977 Histidine biosynthesis protein TCR_RS10310 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TCR_RS10315 PF01230 HIT domain TCR_RS10320 PF02416 mttA/Hcf106 family TCR_RS10325 PF02416 mttA/Hcf106 family TCR_RS10330 PF00902 Sec-independent protein translocase protein (TatC) TCR_RS10335 PF03190 Protein of unknown function, DUF255 TCR_RS10345 PF00156 Phosphoribosyl transferase domain TCR_RS10350 PF06968 Biotin and Thiamin Synthesis associated domain TCR_RS10350 PF04055 Radical SAM superfamily TCR_RS10355 PF00155 Aminotransferase class I and II TCR_RS10360 PF00561 alpha/beta hydrolase fold TCR_RS10365 PF08241 Methyltransferase domain TCR_RS10380 PF08447 PAS fold TCR_RS10380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS10380 PF08447 PAS fold TCR_RS10380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS10395 PF18074 Primosomal protein N C-terminal domain TCR_RS10395 PF00271 Helicase conserved C-terminal domain TCR_RS10395 PF00270 DEAD/DEAH box helicase TCR_RS10395 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TCR_RS10395 PF17764 3′ DNA-binding domain (3′BD) TCR_RS10405 PF00291 Pyridoxal-phosphate dependent enzyme TCR_RS10410 PF04445 Putative SAM-dependent methyltransferase TCR_RS10415 PF08212 Lipocalin-like domain TCR_RS10420 PF01243 Pyridoxamine 5'-phosphate oxidase TCR_RS10420 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region TCR_RS10435 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TCR_RS10440 PF09382 RQC domain TCR_RS10440 PF00570 HRDC domain TCR_RS10440 PF00271 Helicase conserved C-terminal domain TCR_RS10440 PF00270 DEAD/DEAH box helicase TCR_RS10440 PF16124 RecQ zinc-binding TCR_RS10445 PF03773 Predicted permease TCR_RS10455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS10455 PF00672 HAMP domain TCR_RS10455 PF12729 Four helix bundle sensory module for signal transduction TCR_RS10460 PF00873 AcrB/AcrD/AcrF family TCR_RS10470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TCR_RS10470 PF03466 LysR substrate binding domain TCR_RS10475 PF05726 Pirin C-terminal cupin domain TCR_RS10475 PF02678 Pirin TCR_RS10480 PF13426 PAS domain TCR_RS10480 PF08447 PAS fold TCR_RS10480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TCR_RS10495 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TCR_RS10500 PF00563 EAL domain TCR_RS10500 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS10500 PF03707 Bacterial signalling protein N terminal repeat TCR_RS10505 PF03880 DbpA RNA binding domain TCR_RS10505 PF00270 DEAD/DEAH box helicase TCR_RS10505 PF00271 Helicase conserved C-terminal domain TCR_RS10515 PF03480 Bacterial extracellular solute-binding protein, family 7 TCR_RS10530 PF01556 DnaJ C terminal domain TCR_RS10530 PF00226 DnaJ domain TCR_RS10535 PF00593 TonB dependent receptor TCR_RS10535 PF07715 TonB-dependent Receptor Plug Domain TCR_RS10545 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TCR_RS10545 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TCR_RS10545 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TCR_RS10545 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TCR_RS10560 PF02696 Uncharacterized ACR, YdiU/UPF0061 family TCR_RS10565 PF03649 Uncharacterised protein family (UPF0014) TCR_RS10575 PF00011 Hsp20/alpha crystallin family TCR_RS10585 PF00563 EAL domain TCR_RS10585 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS10585 PF03707 Bacterial signalling protein N terminal repeat TCR_RS10595 PF01235 Sodium:alanine symporter family TCR_RS10605 PF13085 2Fe-2S iron-sulfur cluster binding domain TCR_RS10610 PF00890 FAD binding domain TCR_RS10610 PF02910 Fumarate reductase flavoprotein C-term TCR_RS10620 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TCR_RS10625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TCR_RS10625 PF00205 Thiamine pyrophosphate enzyme, central domain TCR_RS10625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TCR_RS10630 PF06167 Glucose-regulated metallo-peptidase M90 TCR_RS10640 PF07503 HypF finger TCR_RS10640 PF01300 Telomere recombination TCR_RS10640 PF17788 HypF Kae1-like domain TCR_RS10640 PF00708 Acylphosphatase TCR_RS10645 PF01750 Hydrogenase maturation protease TCR_RS10650 PF00374 Nickel-dependent hydrogenase TCR_RS10655 PF10518 TAT (twin-arginine translocation) pathway signal sequence TCR_RS10655 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TCR_RS10655 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal TCR_RS10660 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TCR_RS10665 PF02769 AIR synthase related protein, C-terminal domain TCR_RS10665 PF00586 AIR synthase related protein, N-terminal domain TCR_RS10670 PF01924 Hydrogenase formation hypA family TCR_RS10675 PF01455 HupF/HypC family TCR_RS10680 PF02492 CobW/HypB/UreG, nucleotide-binding domain TCR_RS10695 PF00578 AhpC/TSA family TCR_RS10700 PF00581 Rhodanese-like domain TCR_RS10705 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS10705 PF00563 EAL domain TCR_RS10705 PF08448 PAS fold TCR_RS10715 PF17176 tRNA-binding domain TCR_RS10715 PF05127 Helicase TCR_RS10715 PF13718 GNAT acetyltransferase 2 TCR_RS10715 PF08351 Domain of unknown function (DUF1726) TCR_RS10720 PF00551 Formyl transferase TCR_RS10720 PF01842 ACT domain TCR_RS10725 PF03372 Endonuclease/Exonuclease/phosphatase family TCR_RS10730 PF00970 Oxidoreductase FAD-binding domain TCR_RS10730 PF00111 2Fe-2S iron-sulfur cluster binding domain TCR_RS10730 PF00175 Oxidoreductase NAD-binding domain TCR_RS10735 PF01725 Ham1 family TCR_RS10740 PF08340 Domain of unknown function (DUF1732) TCR_RS10740 PF03755 YicC-like family, N-terminal region TCR_RS10750 PF00905 Penicillin binding protein transpeptidase domain TCR_RS10750 PF00912 Transglycosylase TCR_RS10750 PF17092 Penicillin-binding protein OB-like domain TCR_RS10755 PF03881 Fructosamine kinase TCR_RS10760 PF05191 Adenylate kinase, active site lid TCR_RS10765 PF02525 Flavodoxin-like fold TCR_RS10770 PF00571 CBS domain TCR_RS10770 PF03448 MgtE intracellular N domain TCR_RS10770 PF01769 Divalent cation transporter TCR_RS10775 PF08443 RimK-like ATP-grasp domain TCR_RS10775 PF18030 RimK PreATP-grasp domain TCR_RS10785 PF08443 RimK-like ATP-grasp domain TCR_RS10785 PF18030 RimK PreATP-grasp domain TCR_RS10790 PF07715 TonB-dependent Receptor Plug Domain TCR_RS10790 PF07660 Secretin and TonB N terminus short domain TCR_RS10790 PF00593 TonB dependent receptor TCR_RS10810 PF01627 Hpt domain TCR_RS10810 PF00989 PAS fold TCR_RS10810 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS10810 PF00072 Response regulator receiver domain TCR_RS10810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS10810 PF18415 Histidine kinase receptor ArcB trans-membrane domain TCR_RS10820 PF01594 AI-2E family transporter TCR_RS10825 PF06150 ChaB TCR_RS10850 PF01527 Transposase TCR_RS10855 PF00665 Integrase core domain TCR_RS10860 PF00392 Bacterial regulatory proteins, gntR family TCR_RS10860 PF07702 UTRA domain TCR_RS10870 PF00005 ABC transporter TCR_RS10875 PF00528 Binding-protein-dependent transport system inner membrane component TCR_RS10885 PF05845 Bacterial phosphonate metabolism protein (PhnH) TCR_RS10890 PF05861 Bacterial phosphonate metabolism protein (PhnI) TCR_RS10895 PF06007 Phosphonate metabolism protein PhnJ TCR_RS10900 PF00005 ABC transporter TCR_RS10905 PF00005 ABC transporter TCR_RS10910 PF07969 Amidohydrolase family TCR_RS10920 PF12706 Beta-lactamase superfamily domain TCR_RS10945 PF00873 AcrB/AcrD/AcrF family TCR_RS10975 PF01022 Bacterial regulatory protein, arsR family TCR_RS10985 PF03239 Iron permease FTR1 family TCR_RS11000 PF13442 Cytochrome C oxidase, cbb3-type, subunit III TCR_RS11040 PF07732 Multicopper oxidase TCR_RS11040 PF07731 Multicopper oxidase TCR_RS11050 PF05275 Copper resistance protein B precursor (CopB) TCR_RS11055 PF07731 Multicopper oxidase TCR_RS11055 PF07732 Multicopper oxidase TCR_RS11055 PF00394 Multicopper oxidase TCR_RS11080 PF14659 Phage integrase, N-terminal SAM-like domain TCR_RS11080 PF00589 Phage integrase family TCR_RS11110 PF03441 FAD binding domain of DNA photolyase TCR_RS11110 PF00875 DNA photolyase TCR_RS11115 PF13411 MerR HTH family regulatory protein TCR_RS11120 PF13426 PAS domain TCR_RS11120 PF01740 STAS domain TCR_RS11130 PF02664 S-Ribosylhomocysteinase (LuxS) TCR_RS11135 PF01048 Phosphorylase superfamily TCR_RS11140 PF03707 Bacterial signalling protein N terminal repeat TCR_RS11140 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS11140 PF00563 EAL domain TCR_RS11145 PF02222 ATP-grasp domain TCR_RS11145 PF01370 NAD dependent epimerase/dehydratase family TCR_RS11155 PF04542 Sigma-70 region 2 TCR_RS11155 PF04545 Sigma-70, region 4 TCR_RS11155 PF00140 Sigma-70 factor, region 1.2 TCR_RS11160 PF01263 Aldose 1-epimerase TCR_RS11165 PF01761 3-dehydroquinate synthase TCR_RS11170 PF01202 Shikimate kinase TCR_RS11175 PF00625 Guanylate kinase TCR_RS11180 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TCR_RS11185 PF00465 Iron-containing alcohol dehydrogenase TCR_RS11190 PF02348 Cytidylyltransferase TCR_RS11200 PF01192 RNA polymerase Rpb6 TCR_RS11205 PF13291 ACT domain TCR_RS11205 PF04607 Region found in RelA / SpoT proteins TCR_RS11205 PF02824 TGS domain TCR_RS11215 PF00950 ABC 3 transport family TCR_RS11220 PF00950 ABC 3 transport family TCR_RS11225 PF00005 ABC transporter TCR_RS11230 PF01297 Zinc-uptake complex component A periplasmic TCR_RS11235 PF01042 Endoribonuclease L-PSP TCR_RS11240 PF00909 Ammonium Transporter Family TCR_RS11240 PF00672 HAMP domain TCR_RS11250 PF00270 DEAD/DEAH box helicase TCR_RS11250 PF17191 RecG wedge domain TCR_RS11250 PF00271 Helicase conserved C-terminal domain TCR_RS11255 PF04345 Chorismate lyase TCR_RS11265 PF04542 Sigma-70 region 2 TCR_RS11265 PF08281 Sigma-70, region 4 TCR_RS11290 PF01040 UbiA prenyltransferase family TCR_RS11300 PF12804 MobA-like NTP transferase domain TCR_RS11300 PF00132 Bacterial transferase hexapeptide (six repeats) TCR_RS11305 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TCR_RS11305 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TCR_RS11310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TCR_RS11310 PF02874 ATP synthase alpha/beta family, beta-barrel domain TCR_RS11315 PF00231 ATP synthase TCR_RS11320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TCR_RS11320 PF00306 ATP synthase alpha/beta chain, C terminal domain TCR_RS11320 PF02874 ATP synthase alpha/beta family, beta-barrel domain TCR_RS11325 PF00213 ATP synthase delta (OSCP) subunit TCR_RS11330 PF00430 ATP synthase B/B' CF(0) TCR_RS11335 PF00137 ATP synthase subunit C TCR_RS11340 PF00119 ATP synthase A chain TCR_RS11355 PF02195 ParB-like nuclease domain TCR_RS11355 PF17762 HTH domain found in ParB protein TCR_RS11360 PF13614 AAA domain TCR_RS11365 PF02527 rRNA small subunit methyltransferase G TCR_RS11370 PF13932 GidA associated domain TCR_RS11370 PF01134 Glucose inhibited division protein A TCR_RS11380 PF00072 Response regulator receiver domain TCR_RS11385 PF00989 PAS fold TCR_RS11385 PF00072 Response regulator receiver domain TCR_RS11385 PF00497 Bacterial extracellular solute-binding proteins, family 3 TCR_RS11385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS11385 PF01627 Hpt domain TCR_RS11385 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS11400 PF13443 Cro/C1-type HTH DNA-binding domain TCR_RS11405 PF01717 Cobalamin-independent synthase, Catalytic domain TCR_RS11405 PF08267 Cobalamin-independent synthase, N-terminal domain TCR_RS11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TCR_RS11410 PF03466 LysR substrate binding domain TCR_RS11420 PF00158 Sigma-54 interaction domain TCR_RS11420 PF00072 Response regulator receiver domain TCR_RS11430 PF00512 His Kinase A (phospho-acceptor) domain TCR_RS11430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TCR_RS11435 PF00563 EAL domain TCR_RS11435 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS11435 PF03707 Bacterial signalling protein N terminal repeat TCR_RS11440 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term TCR_RS11440 PF14489 QueF-like protein TCR_RS11450 PF09186 Domain of unknown function (DUF1949) TCR_RS11450 PF01205 Uncharacterized protein family UPF0029 TCR_RS11460 PF05958 tRNA (Uracil-5-)-methyltransferase TCR_RS11460 PF01938 TRAM domain TCR_RS11465 PF10396 GTP-binding protein TrmE N-terminus TCR_RS11465 PF12631 MnmE helical domain TCR_RS11465 PF01926 50S ribosome-binding GTPase TCR_RS11475 PF14849 YidC periplasmic domain TCR_RS11475 PF02096 60Kd inner membrane protein TCR_RS11480 PF00825 Ribonuclease P TCR_RS11485 PF00468 Ribosomal protein L34 TCR_RS11490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TCR_RS11495 PF01925 Sulfite exporter TauE/SafE TCR_RS11520 PF03707 Bacterial signalling protein N terminal repeat TCR_RS11520 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS11520 PF00563 EAL domain TCR_RS11525 PF12804 MobA-like NTP transferase domain TCR_RS11530 PF03707 Bacterial signalling protein N terminal repeat TCR_RS11530 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS11530 PF00563 EAL domain TCR_RS11535 PF03707 Bacterial signalling protein N terminal repeat TCR_RS11535 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS11535 PF00563 EAL domain TCR_RS11560 PF03707 Bacterial signalling protein N terminal repeat TCR_RS11560 PF00990 Diguanylate cyclase, GGDEF domain TCR_RS11560 PF00563 EAL domain