locus-tag class description THII_RS00005 PF00004 ATPase family associated with various cellular activities (AAA) THII_RS00005 PF17871 AAA lid domain THII_RS00005 PF02861 Clp amino terminal domain, pathogenicity island component THII_RS00005 PF10431 C-terminal, D2-small domain, of ClpB protein THII_RS00005 PF07724 AAA domain (Cdc48 subfamily) THII_RS00065 PF00975 Thioesterase domain THII_RS00065 PF00550 Phosphopantetheine attachment site THII_RS00065 PF08659 KR domain THII_RS00065 PF02801 Beta-ketoacyl synthase, C-terminal domain THII_RS00065 PF00109 Beta-ketoacyl synthase, N-terminal domain THII_RS00065 PF16197 Ketoacyl-synthetase C-terminal extension THII_RS00065 PF08990 Erythronolide synthase docking THII_RS00065 PF00698 Acyl transferase domain THII_RS00065 PF18369 Polyketide synthase dimerisation element domain THII_RS00080 PF04754 Putative transposase, YhgA-like THII_RS00095 PF04389 Peptidase family M28 THII_RS00100 PF01066 CDP-alcohol phosphatidyltransferase THII_RS00135 PF13247 4Fe-4S dicluster domain THII_RS00140 PF00384 Molybdopterin oxidoreductase THII_RS00140 PF01568 Molydopterin dinucleotide binding domain THII_RS00140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain THII_RS00150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain THII_RS00150 PF01409 tRNA synthetases class II core domain (F) THII_RS00160 PF02153 Prephenate dehydrogenase THII_RS00165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THII_RS00175 PF02224 Cytidylate kinase THII_RS00180 PF00575 S1 RNA binding domain THII_RS00185 PF00216 Bacterial DNA-binding protein THII_RS00190 PF18073 Rubredoxin metal binding domain THII_RS00195 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family THII_RS00200 PF13419 Haloacid dehalogenase-like hydrolase THII_RS00210 PF07516 SecA Wing and Scaffold domain THII_RS00210 PF07517 SecA DEAD-like domain THII_RS00210 PF02810 SEC-C motif THII_RS00210 PF01043 SecA preprotein cross-linking domain THII_RS00240 PF00899 ThiF family THII_RS00245 PF01026 TatD related DNase THII_RS00250 PF00529 HlyD membrane-fusion protein of T1SS THII_RS00250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THII_RS00255 PF00563 EAL domain THII_RS00255 PF00990 Diguanylate cyclase, GGDEF domain THII_RS00255 PF08448 PAS fold THII_RS00275 PF01370 NAD dependent epimerase/dehydratase family THII_RS00280 PF00534 Glycosyl transferases group 1 THII_RS00290 PF02325 YGGT family THII_RS00295 PF14748 Pyrroline-5-carboxylate reductase dimerisation THII_RS00295 PF03807 NADP oxidoreductase coenzyme F420-dependent THII_RS00315 PF01734 Patatin-like phospholipase THII_RS00330 PF00085 Thioredoxin THII_RS00340 PF00929 Exonuclease THII_RS00345 PF01979 Amidohydrolase family THII_RS00355 PF00072 Response regulator receiver domain THII_RS00355 PF00512 His Kinase A (phospho-acceptor) domain THII_RS00355 PF09308 LuxQ, periplasmic THII_RS00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS00360 PF17287 POTRA domain THII_RS00360 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB THII_RS00360 PF08479 POTRA domain, ShlB-type THII_RS00380 PF08534 Redoxin THII_RS00385 PF01293 Phosphoenolpyruvate carboxykinase THII_RS00405 PF13358 DDE superfamily endonuclease THII_RS00460 PF01370 NAD dependent epimerase/dehydratase family THII_RS00465 PF01467 Cytidylyltransferase-like THII_RS00465 PF00294 pfkB family carbohydrate kinase THII_RS00475 PF06804 NlpB/DapX lipoprotein THII_RS00485 PF00701 Dihydrodipicolinate synthetase family THII_RS00515 PF03167 Uracil DNA glycosylase superfamily THII_RS00520 PF04055 Radical SAM superfamily THII_RS00520 PF06969 HemN C-terminal domain THII_RS00530 PF01063 Amino-transferase class IV THII_RS00540 PF01075 Glycosyltransferase family 9 (heptosyltransferase) THII_RS00560 PF02630 SCO1/SenC THII_RS00600 PF04898 Glutamate synthase central domain THII_RS00600 PF01493 GXGXG motif THII_RS00600 PF01645 Conserved region in glutamate synthase THII_RS00600 PF00310 Glutamine amidotransferases class-II THII_RS00605 PF13847 Methyltransferase domain THII_RS00620 PF04235 Protein of unknown function (DUF418) THII_RS00630 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain THII_RS00630 PF02843 Phosphoribosylglycinamide synthetase, C domain THII_RS00630 PF02844 Phosphoribosylglycinamide synthetase, N domain THII_RS00635 PF02594 Uncharacterised ACR, YggU family COG1872 THII_RS00650 PF07726 ATPase family associated with various cellular activities (AAA) THII_RS00650 PF17863 AAA lid domain THII_RS00695 PF00005 ABC transporter THII_RS00695 PF02687 FtsX-like permease family THII_RS00695 PF12704 MacB-like periplasmic core domain THII_RS00700 PF02687 FtsX-like permease family THII_RS00700 PF12704 MacB-like periplasmic core domain THII_RS00715 PF01588 Putative tRNA binding domain THII_RS00715 PF09334 tRNA synthetases class I (M) THII_RS00720 PF00639 PPIC-type PPIASE domain THII_RS00720 PF09312 SurA N-terminal domain THII_RS00735 PF00216 Bacterial DNA-binding protein THII_RS00740 PF05362 Lon protease (S16) C-terminal proteolytic domain THII_RS00740 PF00004 ATPase family associated with various cellular activities (AAA) THII_RS00740 PF02190 ATP-dependent protease La (LON) substrate-binding domain THII_RS00745 PF06689 ClpX C4-type zinc finger THII_RS00745 PF10431 C-terminal, D2-small domain, of ClpB protein THII_RS00745 PF07724 AAA domain (Cdc48 subfamily) THII_RS00750 PF00574 Clp protease THII_RS00755 PF05697 Bacterial trigger factor protein (TF) THII_RS00755 PF05698 Bacterial trigger factor protein (TF) C-terminus THII_RS00755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THII_RS00770 PF00037 4Fe-4S binding domain THII_RS00775 PF01467 Cytidylyltransferase-like THII_RS00780 PF00490 Delta-aminolevulinic acid dehydratase THII_RS00790 PF03483 B3/4 domain THII_RS00790 PF03484 tRNA synthetase B5 domain THII_RS00790 PF03147 Ferredoxin-fold anticodon binding domain THII_RS00790 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain THII_RS00790 PF01588 Putative tRNA binding domain THII_RS00795 PF00216 Bacterial DNA-binding protein THII_RS00805 PF01521 Iron-sulphur cluster biosynthesis THII_RS00835 PF12323 Helix-turn-helix domain THII_RS00835 PF01385 Probable transposase THII_RS00835 PF07282 Putative transposase DNA-binding domain THII_RS00900 PF13538 UvrD-like helicase C-terminal domain THII_RS00905 PF01520 N-acetylmuramoyl-L-alanine amidase THII_RS00905 PF11741 AMIN domain THII_RS00910 PF01145 SPFH domain / Band 7 family THII_RS00920 PF00085 Thioredoxin THII_RS00925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THII_RS00925 PF07497 Rho termination factor, RNA-binding domain THII_RS00925 PF07498 Rho termination factor, N-terminal domain THII_RS00940 PF02685 Glucokinase THII_RS00950 PF05685 Putative restriction endonuclease THII_RS00970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS00970 PF00512 His Kinase A (phospho-acceptor) domain THII_RS00970 PF09308 LuxQ, periplasmic THII_RS00970 PF00072 Response regulator receiver domain THII_RS00980 PF00708 Acylphosphatase THII_RS00985 PF01061 ABC-2 type transporter THII_RS00995 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase THII_RS01000 PF00111 2Fe-2S iron-sulfur cluster binding domain THII_RS01000 PF01799 [2Fe-2S] binding domain THII_RS01005 PF13840 ACT domain THII_RS01005 PF01842 ACT domain THII_RS01005 PF00696 Amino acid kinase family THII_RS01010 PF02599 Global regulator protein family THII_RS01020 PF03772 Competence protein THII_RS01020 PF00753 Metallo-beta-lactamase superfamily THII_RS01025 PF05175 Methyltransferase small domain THII_RS01025 PF17827 PrmC N-terminal domain THII_RS01030 PF01048 Phosphorylase superfamily THII_RS01035 PF00156 Phosphoribosyl transferase domain THII_RS01040 PF08241 Methyltransferase domain THII_RS01065 PF01678 Diaminopimelate epimerase THII_RS01075 PF02754 Cysteine-rich domain THII_RS01085 PF00005 ABC transporter THII_RS01085 PF14524 Wzt C-terminal domain THII_RS01090 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain THII_RS01100 PF00317 Ribonucleotide reductase, all-alpha domain THII_RS01100 PF03477 ATP cone domain THII_RS01100 PF02867 Ribonucleotide reductase, barrel domain THII_RS01105 PF17848 Acetyl-coA carboxylase zinc finger domain THII_RS01105 PF01039 Carboxyl transferase domain THII_RS01135 PF00593 TonB dependent receptor THII_RS01135 PF07715 TonB-dependent Receptor Plug Domain THII_RS01165 PF00067 Cytochrome P450 THII_RS01180 PF01266 FAD dependent oxidoreductase THII_RS01185 PF00202 Aminotransferase class-III THII_RS01225 PF00781 Diacylglycerol kinase catalytic domain THII_RS01230 PF01494 FAD binding domain THII_RS01245 PF07690 Major Facilitator Superfamily THII_RS01255 PF01192 RNA polymerase Rpb6 THII_RS01260 PF04607 Region found in RelA / SpoT proteins THII_RS01260 PF02824 TGS domain THII_RS01260 PF13291 ACT domain THII_RS01265 PF03695 Uncharacterised protein family (UPF0149) THII_RS01270 PF00557 Metallopeptidase family M24 THII_RS01270 PF05195 Aminopeptidase P, N-terminal domain THII_RS01295 PF00343 Carbohydrate phosphorylase THII_RS01295 PF11897 Protein of unknown function (DUF3417) THII_RS01300 PF00120 Glutamine synthetase, catalytic domain THII_RS01300 PF03951 Glutamine synthetase, beta-Grasp domain THII_RS01305 PF16916 Dimerisation domain of Zinc Transporter THII_RS01305 PF01545 Cation efflux family THII_RS01310 PF01345 Domain of unknown function DUF11 THII_RS01310 PF03504 Chlamydia cysteine-rich outer membrane protein 6 THII_RS01315 PF02590 Predicted SPOUT methyltransferase THII_RS01320 PF02545 Maf-like protein THII_RS01340 PF03423 Carbohydrate binding domain (family 25) THII_RS01340 PF01373 Glycosyl hydrolase family 14 THII_RS01340 PF00128 Alpha amylase, catalytic domain THII_RS01345 PF00512 His Kinase A (phospho-acceptor) domain THII_RS01345 PF01627 Hpt domain THII_RS01345 PF00072 Response regulator receiver domain THII_RS01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS01350 PF00512 His Kinase A (phospho-acceptor) domain THII_RS01350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS01350 PF00672 HAMP domain THII_RS01350 PF17149 Periplasmic sensor domain found in signal transduction proteins THII_RS01350 PF01627 Hpt domain THII_RS01350 PF00072 Response regulator receiver domain THII_RS01365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain THII_RS01365 PF00384 Molybdopterin oxidoreductase THII_RS01365 PF01568 Molydopterin dinucleotide binding domain THII_RS01405 PF05685 Putative restriction endonuclease THII_RS01435 PF16363 GDP-mannose 4,6 dehydratase THII_RS01440 PF01370 NAD dependent epimerase/dehydratase family THII_RS01445 PF01196 Ribosomal protein L17 THII_RS01450 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain THII_RS01450 PF01000 RNA polymerase Rpb3/RpoA insert domain THII_RS01450 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain THII_RS01455 PF00163 Ribosomal protein S4/S9 N-terminal domain THII_RS01455 PF01479 S4 domain THII_RS01460 PF00411 Ribosomal protein S11 THII_RS01465 PF00416 Ribosomal protein S13/S18 THII_RS01470 PF00344 SecY translocase THII_RS01475 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A THII_RS01480 PF00327 Ribosomal protein L30p/L7e THII_RS01485 PF00333 Ribosomal protein S5, N-terminal domain THII_RS01485 PF03719 Ribosomal protein S5, C-terminal domain THII_RS01490 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast THII_RS01495 PF00347 Ribosomal protein L6 THII_RS01500 PF00410 Ribosomal protein S8 THII_RS01505 PF00253 Ribosomal protein S14p/S29e THII_RS01510 PF00281 Ribosomal protein L5 THII_RS01510 PF00673 ribosomal L5P family C-terminus THII_RS01515 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 THII_RS01520 PF00238 Ribosomal protein L14p/L23e THII_RS01525 PF00366 Ribosomal protein S17 THII_RS01530 PF00831 Ribosomal L29 protein THII_RS01535 PF00252 Ribosomal protein L16p/L10e THII_RS01540 PF07650 KH domain THII_RS01540 PF00189 Ribosomal protein S3, C-terminal domain THII_RS01545 PF00237 Ribosomal protein L22p/L17e THII_RS01550 PF00203 Ribosomal protein S19 THII_RS01555 PF03947 Ribosomal Proteins L2, C-terminal domain THII_RS01555 PF00181 Ribosomal Proteins L2, RNA binding domain THII_RS01560 PF00276 Ribosomal protein L23 THII_RS01565 PF00573 Ribosomal protein L4/L1 family THII_RS01570 PF00297 Ribosomal protein L3 THII_RS01575 PF00338 Ribosomal protein S10p/S20e THII_RS01580 PF03144 Elongation factor Tu domain 2 THII_RS01580 PF00009 Elongation factor Tu GTP binding domain THII_RS01580 PF03143 Elongation factor Tu C-terminal domain THII_RS01585 PF14492 Elongation Factor G, domain II THII_RS01585 PF03764 Elongation factor G, domain IV THII_RS01585 PF00009 Elongation factor Tu GTP binding domain THII_RS01585 PF00679 Elongation factor G C-terminus THII_RS01585 PF03144 Elongation factor Tu domain 2 THII_RS01590 PF00177 Ribosomal protein S7p/S5e THII_RS01595 PF00164 Ribosomal protein S12/S23 THII_RS01630 PF00474 Sodium:solute symporter family THII_RS01640 PF01322 Cytochrome C' THII_RS01650 PF12146 Serine aminopeptidase, S33 THII_RS01670 PF00623 RNA polymerase Rpb1, domain 2 THII_RS01670 PF04983 RNA polymerase Rpb1, domain 3 THII_RS01670 PF05000 RNA polymerase Rpb1, domain 4 THII_RS01670 PF04998 RNA polymerase Rpb1, domain 5 THII_RS01670 PF04997 RNA polymerase Rpb1, domain 1 THII_RS01690 PF00034 Cytochrome c THII_RS01695 PF00115 Cytochrome C and Quinol oxidase polypeptide I THII_RS01700 PF07728 AAA domain (dynein-related subfamily) THII_RS01700 PF08406 CbbQ/NirQ/NorQ C-terminal THII_RS01715 PF00092 von Willebrand factor type A domain THII_RS01760 PF03969 AFG1-like ATPase THII_RS01765 PF00011 Hsp20/alpha crystallin family THII_RS01770 PF00672 HAMP domain THII_RS01770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS01770 PF18698 Histidine kinase sensor domain THII_RS01770 PF00512 His Kinase A (phospho-acceptor) domain THII_RS01770 PF00989 PAS fold THII_RS01775 PF04371 Porphyromonas-type peptidyl-arginine deiminase THII_RS01785 PF00795 Carbon-nitrogen hydrolase THII_RS01790 PF00072 Response regulator receiver domain THII_RS01790 PF00990 Diguanylate cyclase, GGDEF domain THII_RS01795 PF01145 SPFH domain / Band 7 family THII_RS01795 PF15975 Flotillin THII_RS01800 PF07290 Protein of unknown function (DUF1449) THII_RS01810 PF02542 YgbB family THII_RS01815 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase THII_RS01820 PF04977 Septum formation initiator THII_RS01845 PF01634 ATP phosphoribosyltransferase THII_RS01850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THII_RS01855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain THII_RS01855 PF00117 Glutamine amidotransferase class-I THII_RS01915 PF00365 Phosphofructokinase THII_RS01925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD THII_RS01930 PF01297 Zinc-uptake complex component A periplasmic THII_RS01935 PF00005 ABC transporter THII_RS01940 PF00950 ABC 3 transport family THII_RS01950 PF00689 Cation transporting ATPase, C-terminus THII_RS01950 PF00690 Cation transporter/ATPase, N-terminus THII_RS01960 PF02492 CobW/HypB/UreG, nucleotide-binding domain THII_RS01960 PF07683 Cobalamin synthesis protein cobW C-terminal domain THII_RS01980 PF02152 Dihydroneopterin aldolase THII_RS01985 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) THII_RS02055 PF04408 Helicase associated domain (HA2) THII_RS02055 PF00271 Helicase conserved C-terminal domain THII_RS02055 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold THII_RS02055 PF00270 DEAD/DEAH box helicase THII_RS02055 PF11898 Domain of unknown function (DUF3418) THII_RS02070 PF09179 TilS substrate binding domain THII_RS02070 PF11734 TilS substrate C-terminal domain THII_RS02070 PF01171 PP-loop family THII_RS02075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS02075 PF00183 Hsp90 protein THII_RS02090 PF02698 DUF218 domain THII_RS02100 PF04055 Radical SAM superfamily THII_RS02105 PF09285 Elongation factor P, C-terminal THII_RS02105 PF08207 Elongation factor P (EF-P) KOW-like domain THII_RS02105 PF01132 Elongation factor P (EF-P) OB domain THII_RS02110 PF03588 Leucyl/phenylalanyl-tRNA protein transferase THII_RS02115 PF04377 Arginine-tRNA-protein transferase, C terminus THII_RS02115 PF04376 Arginine-tRNA-protein transferase, N terminus THII_RS02120 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain THII_RS02120 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THII_RS02125 PF01966 HD domain THII_RS02135 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain THII_RS02135 PF00437 Type II/IV secretion system protein THII_RS02145 PF00398 Ribosomal RNA adenine dimethylase THII_RS02150 PF00565 Staphylococcal nuclease homologue THII_RS02170 PF13085 2Fe-2S iron-sulfur cluster binding domain THII_RS02175 PF00890 FAD binding domain THII_RS02175 PF02910 Fumarate reductase flavoprotein C-term THII_RS02180 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit THII_RS02185 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit THII_RS02190 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase THII_RS02195 PF01263 Aldose 1-epimerase THII_RS02200 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain THII_RS02200 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain THII_RS02235 PF11849 Domain of unknown function (DUF3369) THII_RS02240 PF00140 Sigma-70 factor, region 1.2 THII_RS02240 PF04545 Sigma-70, region 4 THII_RS02240 PF04542 Sigma-70 region 2 THII_RS02245 PF00535 Glycosyl transferase family 2 THII_RS02255 PF01740 STAS domain THII_RS02255 PF00916 Sulfate permease family THII_RS02320 PF04199 Putative cyclase THII_RS02330 PF01515 Phosphate acetyl/butaryl transferase THII_RS02330 PF03949 Malic enzyme, NAD binding domain THII_RS02330 PF00390 Malic enzyme, N-terminal domain THII_RS02335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THII_RS02360 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase THII_RS02365 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase THII_RS02375 PF01799 [2Fe-2S] binding domain THII_RS02375 PF00111 2Fe-2S iron-sulfur cluster binding domain THII_RS02385 PF01327 Polypeptide deformylase THII_RS02390 PF00551 Formyl transferase THII_RS02390 PF02911 Formyl transferase, C-terminal domain THII_RS02415 PF01139 tRNA-splicing ligase RtcB THII_RS02430 PF00005 ABC transporter THII_RS02440 PF00005 ABC transporter THII_RS02445 PF12704 MacB-like periplasmic core domain THII_RS02445 PF02687 FtsX-like permease family THII_RS02445 PF00005 ABC transporter THII_RS02465 PF00072 Response regulator receiver domain THII_RS02465 PF02954 Bacterial regulatory protein, Fis family THII_RS02465 PF00158 Sigma-54 interaction domain THII_RS02490 PF01797 Transposase IS200 like THII_RS02505 PF00072 Response regulator receiver domain THII_RS02505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS02505 PF00512 His Kinase A (phospho-acceptor) domain THII_RS02505 PF09308 LuxQ, periplasmic THII_RS02525 PF02424 ApbE family THII_RS02555 PF07669 Eco57I restriction-modification methylase THII_RS02570 PF01709 Transcriptional regulator THII_RS02575 PF02075 Crossover junction endodeoxyribonuclease RuvC THII_RS02580 PF07499 RuvA, C-terminal domain THII_RS02580 PF01330 RuvA N terminal domain THII_RS02585 PF00561 alpha/beta hydrolase fold THII_RS02595 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 THII_RS02600 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THII_RS02605 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THII_RS02610 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THII_RS02645 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THII_RS02645 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THII_RS02645 PF10531 SLBB domain THII_RS02670 PF00463 Isocitrate lyase family THII_RS02675 PF01274 Malate synthase THII_RS02680 PF04542 Sigma-70 region 2 THII_RS02680 PF00140 Sigma-70 factor, region 1.2 THII_RS02680 PF04545 Sigma-70, region 4 THII_RS02680 PF03979 Sigma-70 factor, region 1.1 THII_RS02680 PF04539 Sigma-70 region 3 THII_RS02690 PF00266 Aminotransferase class-V THII_RS02700 PF00486 Transcriptional regulatory protein, C terminal THII_RS02700 PF00072 Response regulator receiver domain THII_RS02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS02705 PF00989 PAS fold THII_RS02705 PF00512 His Kinase A (phospho-acceptor) domain THII_RS02710 PF00211 Adenylate and Guanylate cyclase catalytic domain THII_RS02715 PF04317 YcjX-like family, DUF463 THII_RS02720 PF05128 Domain of unknown function (DUF697) THII_RS02745 PF00072 Response regulator receiver domain THII_RS02745 PF01339 CheB methylesterase THII_RS02750 PF01739 CheR methyltransferase, SAM binding domain THII_RS02750 PF03705 CheR methyltransferase, all-alpha domain THII_RS02760 PF00672 HAMP domain THII_RS02760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS02765 PF01584 CheW-like domain THII_RS02770 PF02895 Signal transducing histidine kinase, homodimeric domain THII_RS02770 PF01627 Hpt domain THII_RS02770 PF09078 CheY binding THII_RS02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS02770 PF01584 CheW-like domain THII_RS02775 PF00072 Response regulator receiver domain THII_RS02790 PF00696 Amino acid kinase family THII_RS02795 PF03937 Flavinator of succinate dehydrogenase THII_RS02805 PF01541 GIY-YIG catalytic domain THII_RS02805 PF02151 UvrB/uvrC motif THII_RS02805 PF08459 UvrC Helix-hairpin-helix N-terminal THII_RS02810 PF01066 CDP-alcohol phosphatidyltransferase THII_RS02825 PF01867 CRISPR associated protein Cas1 THII_RS02830 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system THII_RS02845 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system THII_RS02850 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system THII_RS02870 PF00109 Beta-ketoacyl synthase, N-terminal domain THII_RS02870 PF02801 Beta-ketoacyl synthase, C-terminal domain THII_RS02875 PF07977 FabA-like domain THII_RS02900 PF01625 Peptide methionine sulfoxide reductase THII_RS02910 PF02741 FTR, proximal lobe THII_RS02910 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase THII_RS02920 PF04069 Substrate binding domain of ABC-type glycine betaine transport system THII_RS02925 PF00263 Bacterial type II and III secretion system protein THII_RS02925 PF03958 Bacterial type II/III secretion system short domain THII_RS02940 PF00378 Enoyl-CoA hydratase/isomerase THII_RS02940 PF02911 Formyl transferase, C-terminal domain THII_RS02940 PF00551 Formyl transferase THII_RS02945 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ THII_RS02950 PF08245 Mur ligase middle domain THII_RS02950 PF02875 Mur ligase family, glutamate ligase domain THII_RS02955 PF00464 Serine hydroxymethyltransferase THII_RS02960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THII_RS02960 PF01872 RibD C-terminal domain THII_RS02965 PF14667 Polysaccharide biosynthesis C-terminal domain THII_RS02995 PF03989 DNA gyrase C-terminal domain, beta-propeller THII_RS02995 PF00521 DNA gyrase/topoisomerase IV, subunit A THII_RS03000 PF00893 Small Multidrug Resistance protein THII_RS03005 PF02348 Cytidylyltransferase THII_RS03030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THII_RS03030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THII_RS03035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THII_RS03035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THII_RS03040 PF02635 DsrE/DsrF-like family THII_RS03045 PF02635 DsrE/DsrF-like family THII_RS03055 PF04358 DsrC like protein THII_RS03070 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THII_RS03070 PF07992 Pyridine nucleotide-disulphide oxidoreductase THII_RS03080 PF13247 4Fe-4S dicluster domain THII_RS03090 PF02885 Glycosyl transferase family, helical bundle domain THII_RS03090 PF00591 Glycosyl transferase family, a/b domain THII_RS03115 PF00873 AcrB/AcrD/AcrF family THII_RS03150 PF13361 UvrD-like helicase C-terminal domain THII_RS03150 PF00580 UvrD/REP helicase N-terminal domain THII_RS03150 PF12705 PD-(D/E)XK nuclease superfamily THII_RS03165 PF00534 Glycosyl transferases group 1 THII_RS03165 PF13439 Glycosyltransferase Family 4 THII_RS03170 PF02350 UDP-N-acetylglucosamine 2-epimerase THII_RS03175 PF03808 Glycosyl transferase WecB/TagA/CpsF family THII_RS03180 PF06470 SMC proteins Flexible Hinge Domain THII_RS03180 PF02463 RecF/RecN/SMC N terminal domain THII_RS03190 PF05711 Macrocin-O-methyltransferase (TylF) THII_RS03195 PF03413 Peptidase propeptide and YPEB domain THII_RS03195 PF01447 Thermolysin metallopeptidase, catalytic domain THII_RS03195 PF02868 Thermolysin metallopeptidase, alpha-helical domain THII_RS03195 PF04151 Bacterial pre-peptidase C-terminal domain THII_RS03195 PF07504 Fungalysin/Thermolysin Propeptide Motif THII_RS03200 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ THII_RS03210 PF01979 Amidohydrolase family THII_RS03215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THII_RS03215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THII_RS03220 PF00156 Phosphoribosyl transferase domain THII_RS03225 PF03652 Holliday junction resolvase THII_RS03230 PF02622 Uncharacterized ACR, COG1678 THII_RS03250 PF10119 Predicted methyltransferase regulatory domain THII_RS03250 PF13847 Methyltransferase domain THII_RS03260 PF03466 LysR substrate binding domain THII_RS03260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THII_RS03265 PF00437 Type II/IV secretion system protein THII_RS03270 PF00437 Type II/IV secretion system protein THII_RS03275 PF00437 Type II/IV secretion system protein THII_RS03280 PF00005 ABC transporter THII_RS03285 PF02569 Pantoate-beta-alanine ligase THII_RS03305 PF00814 Glycoprotease family THII_RS03315 PF13419 Haloacid dehalogenase-like hydrolase THII_RS03330 PF03062 MBOAT, membrane-bound O-acyltransferase family THII_RS03335 PF00501 AMP-binding enzyme THII_RS03335 PF13193 AMP-binding enzyme C-terminal domain THII_RS03350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THII_RS03350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THII_RS03355 PF03597 Cytochrome oxidase maturation protein cbb3-type THII_RS03370 PF00528 Binding-protein-dependent transport system inner membrane component THII_RS03370 PF12911 N-terminal TM domain of oligopeptide transport permease C THII_RS03375 PF00528 Binding-protein-dependent transport system inner membrane component THII_RS03380 PF01790 Prolipoprotein diacylglyceryl transferase THII_RS03395 PF04397 LytTr DNA-binding domain THII_RS03395 PF00072 Response regulator receiver domain THII_RS03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS03400 PF06580 Histidine kinase THII_RS03405 PF01841 Transglutaminase-like superfamily THII_RS03405 PF08379 Bacterial transglutaminase-like N-terminal region THII_RS03435 PF01225 Mur ligase family, catalytic domain THII_RS03435 PF02875 Mur ligase family, glutamate ligase domain THII_RS03435 PF08245 Mur ligase middle domain THII_RS03440 PF02441 Flavoprotein THII_RS03460 PF18073 Rubredoxin metal binding domain THII_RS03470 PF03379 CcmB protein THII_RS03490 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like THII_RS03495 PF01272 Transcription elongation factor, GreA/GreB, C-term THII_RS03495 PF03449 Transcription elongation factor, N-terminal THII_RS03500 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain THII_RS03500 PF02142 MGS-like domain THII_RS03500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THII_RS03505 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain THII_RS03505 PF00117 Glutamine amidotransferase class-I THII_RS03520 PF00202 Aminotransferase class-III THII_RS03525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THII_RS03525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THII_RS03530 PF00480 ROK family THII_RS03535 PF00005 ABC transporter THII_RS03540 PF00535 Glycosyl transferase family 2 THII_RS03575 PF00303 Thymidylate synthase THII_RS03590 PF00202 Aminotransferase class-III THII_RS03595 PF14849 YidC periplasmic domain THII_RS03595 PF02096 60Kd inner membrane protein THII_RS03600 PF00825 Ribonuclease P THII_RS03605 PF00468 Ribosomal protein L34 THII_RS03610 PF02768 DNA polymerase III beta subunit, C-terminal domain THII_RS03610 PF00712 DNA polymerase III beta subunit, N-terminal domain THII_RS03610 PF02767 DNA polymerase III beta subunit, central domain THII_RS03635 PF00535 Glycosyl transferase family 2 THII_RS03645 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THII_RS03650 PF01370 NAD dependent epimerase/dehydratase family THII_RS03655 PF00535 Glycosyl transferase family 2 THII_RS03660 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THII_RS03665 PF02911 Formyl transferase, C-terminal domain THII_RS03665 PF00551 Formyl transferase THII_RS03670 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THII_RS03680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THII_RS03680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain THII_RS03685 PF00657 GDSL-like Lipase/Acylhydrolase THII_RS03705 PF00009 Elongation factor Tu GTP binding domain THII_RS03705 PF16658 Class II release factor RF3, C-terminal domain THII_RS03705 PF03144 Elongation factor Tu domain 2 THII_RS03715 PF09308 LuxQ, periplasmic THII_RS03715 PF00072 Response regulator receiver domain THII_RS03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS03715 PF00512 His Kinase A (phospho-acceptor) domain THII_RS03720 PF00072 Response regulator receiver domain THII_RS03720 PF00512 His Kinase A (phospho-acceptor) domain THII_RS03720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS03720 PF00672 HAMP domain THII_RS03720 PF01627 Hpt domain THII_RS03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS03735 PF14698 Argininosuccinate lyase C-terminal THII_RS03735 PF00206 Lyase THII_RS03745 PF03030 Inorganic H+ pyrophosphatase THII_RS03760 PF01734 Patatin-like phospholipase THII_RS03775 PF00535 Glycosyl transferase family 2 THII_RS03785 PF00005 ABC transporter THII_RS03785 PF00664 ABC transporter transmembrane region THII_RS03795 PF06508 Queuosine biosynthesis protein QueC THII_RS03800 PF00691 OmpA family THII_RS03810 PF03739 Lipopolysaccharide export system permease LptF/LptG THII_RS03825 PF00485 Phosphoribulokinase / Uridine kinase family THII_RS03835 PF13559 Domain of unknown function (DUF4129) THII_RS03835 PF11992 Domain of unknown function (DUF3488) THII_RS03835 PF01841 Transglutaminase-like superfamily THII_RS03850 PF00072 Response regulator receiver domain THII_RS03865 PF07992 Pyridine nucleotide-disulphide oxidoreductase THII_RS03870 PF14759 Reductase C-terminal THII_RS03870 PF07992 Pyridine nucleotide-disulphide oxidoreductase THII_RS03875 PF02881 SRP54-type protein, helical bundle domain THII_RS03875 PF00448 SRP54-type protein, GTPase domain THII_RS03880 PF00005 ABC transporter THII_RS03885 PF18075 FtsX extracellular domain THII_RS03895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain THII_RS03895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THII_RS03900 PF00456 Transketolase, thiamine diphosphate binding domain THII_RS03900 PF02780 Transketolase, C-terminal domain THII_RS03900 PF02779 Transketolase, pyrimidine binding domain THII_RS03935 PF01381 Helix-turn-helix THII_RS03945 PF04166 Pyridoxal phosphate biosynthetic protein PdxA THII_RS03950 PF01018 GTP1/OBG THII_RS03950 PF04055 Radical SAM superfamily THII_RS03950 PF01926 50S ribosome-binding GTPase THII_RS03960 PF00082 Subtilase family THII_RS03965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THII_RS03965 PF02706 Chain length determinant protein THII_RS03965 PF13807 G-rich domain on putative tyrosine kinase THII_RS03975 PF10531 SLBB domain THII_RS03975 PF18412 Outer-membrane lipoprotein Wza C-terminal domain THII_RS03975 PF02563 Polysaccharide biosynthesis/export protein THII_RS03990 PF00072 Response regulator receiver domain THII_RS03990 PF00486 Transcriptional regulatory protein, C terminal THII_RS03995 PF00989 PAS fold THII_RS03995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS03995 PF00512 His Kinase A (phospho-acceptor) domain THII_RS04005 PF00117 Glutamine amidotransferase class-I THII_RS04010 PF01494 FAD binding domain THII_RS04020 PF07733 Bacterial DNA polymerase III alpha NTPase domain THII_RS04020 PF14579 Helix-hairpin-helix motif THII_RS04020 PF00929 Exonuclease THII_RS04020 PF02811 PHP domain THII_RS04020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THII_RS04025 PF00005 ABC transporter THII_RS04050 PF00293 NUDIX domain THII_RS04060 PF05114 Protein of unknown function (DUF692) THII_RS04080 PF04357 TamB, inner membrane protein subunit of TAM complex THII_RS04090 PF02397 Bacterial sugar transferase THII_RS04095 PF01734 Patatin-like phospholipase THII_RS04120 PF00535 Glycosyl transferase family 2 THII_RS04145 PF00375 Sodium:dicarboxylate symporter family THII_RS04150 PF00230 Major intrinsic protein THII_RS04160 PF00106 short chain dehydrogenase THII_RS04165 PF07879 PHB/PHA accumulation regulator DNA-binding domain THII_RS04165 PF05233 PHB accumulation regulatory domain THII_RS04170 PF02803 Thiolase, C-terminal domain THII_RS04170 PF00108 Thiolase, N-terminal domain THII_RS04180 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THII_RS04185 PF12419 SNF2 Helicase protein THII_RS04185 PF00271 Helicase conserved C-terminal domain THII_RS04185 PF00176 SNF2 family N-terminal domain THII_RS04200 PF03814 Potassium-transporting ATPase A subunit THII_RS04210 PF02669 K+-transporting ATPase, c chain THII_RS04225 PF04386 Stringent starvation protein B THII_RS04230 PF02167 Cytochrome C1 family THII_RS04235 PF00033 Cytochrome b/b6/petB THII_RS04235 PF00032 Cytochrome b(C-terminal)/b6/petD THII_RS04240 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal THII_RS04240 PF00355 Rieske [2Fe-2S] domain THII_RS04245 PF03958 Bacterial type II/III secretion system short domain THII_RS04245 PF00263 Bacterial type II and III secretion system protein THII_RS04255 PF08334 Type II secretion system (T2SS), protein G THII_RS04255 PF07963 Prokaryotic N-terminal methylation motif THII_RS04260 PF07963 Prokaryotic N-terminal methylation motif THII_RS04260 PF00114 Pilin (bacterial filament) THII_RS04265 PF07963 Prokaryotic N-terminal methylation motif THII_RS04285 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) THII_RS04290 PF01022 Bacterial regulatory protein, arsR family THII_RS04295 PF01758 Sodium Bile acid symporter family THII_RS04300 PF03773 Predicted permease THII_RS04310 PF01451 Low molecular weight phosphotyrosine protein phosphatase THII_RS04320 PF00692 dUTPase THII_RS04330 PF12894 Anaphase-promoting complex subunit 4 WD40 domain THII_RS04330 PF00400 WD domain, G-beta repeat THII_RS04345 PF05175 Methyltransferase small domain THII_RS04355 PF00563 EAL domain THII_RS04355 PF00990 Diguanylate cyclase, GGDEF domain THII_RS04355 PF03707 Bacterial signalling protein N terminal repeat THII_RS04360 PF00486 Transcriptional regulatory protein, C terminal THII_RS04360 PF00072 Response regulator receiver domain THII_RS04375 PF02016 LD-carboxypeptidase N-terminal domain THII_RS04375 PF17676 LD-carboxypeptidase C-terminal domain THII_RS04380 PF00892 EamA-like transporter family THII_RS04400 PF03737 Aldolase/RraA THII_RS04425 PF00749 tRNA synthetases class I (E and Q), catalytic domain THII_RS04480 PF00873 AcrB/AcrD/AcrF family THII_RS04485 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family THII_RS04500 PF00004 ATPase family associated with various cellular activities (AAA) THII_RS04530 PF00361 Proton-conducting membrane transporter THII_RS04535 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THII_RS04555 PF00072 Response regulator receiver domain THII_RS04555 PF00990 Diguanylate cyclase, GGDEF domain THII_RS04560 PF06968 Biotin and Thiamin Synthesis associated domain THII_RS04560 PF04055 Radical SAM superfamily THII_RS04590 PF16347 Domain of unknown function (DUF4976) THII_RS04590 PF00884 Sulfatase THII_RS04595 PF04002 RadC-like JAB domain THII_RS04600 PF04127 DNA / pantothenate metabolism flavoprotein THII_RS04600 PF02441 Flavoprotein THII_RS04625 PF00293 NUDIX domain THII_RS04630 PF00672 HAMP domain THII_RS04630 PF00512 His Kinase A (phospho-acceptor) domain THII_RS04630 PF01627 Hpt domain THII_RS04630 PF00072 Response regulator receiver domain THII_RS04630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS04630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS04635 PF10119 Predicted methyltransferase regulatory domain THII_RS04635 PF13847 Methyltransferase domain THII_RS04640 PF02666 Phosphatidylserine decarboxylase THII_RS04660 PF00196 Bacterial regulatory proteins, luxR family THII_RS04660 PF00072 Response regulator receiver domain THII_RS04675 PF00877 NlpC/P60 family THII_RS04675 PF08239 Bacterial SH3 domain THII_RS04675 PF01476 LysM domain THII_RS04680 PF06167 Glucose-regulated metallo-peptidase M90 THII_RS04685 PF00919 Uncharacterized protein family UPF0004 THII_RS04685 PF04055 Radical SAM superfamily THII_RS04685 PF18693 TRAM domain THII_RS04695 PF01502 Phosphoribosyl-AMP cyclohydrolase THII_RS04700 PF08501 Shikimate dehydrogenase substrate binding domain THII_RS04700 PF01488 Shikimate / quinate 5-dehydrogenase THII_RS04700 PF18317 Shikimate 5'-dehydrogenase C-terminal domain THII_RS04745 PF02445 Quinolinate synthetase A protein THII_RS04750 PF17191 RecG wedge domain THII_RS04750 PF00270 DEAD/DEAH box helicase THII_RS04750 PF00271 Helicase conserved C-terminal domain THII_RS04775 PF00196 Bacterial regulatory proteins, luxR family THII_RS04775 PF00072 Response regulator receiver domain THII_RS04780 PF17149 Periplasmic sensor domain found in signal transduction proteins THII_RS04780 PF01627 Hpt domain THII_RS04780 PF00672 HAMP domain THII_RS04780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS04780 PF00512 His Kinase A (phospho-acceptor) domain THII_RS04780 PF00072 Response regulator receiver domain THII_RS04795 PF17863 AAA lid domain THII_RS04795 PF07726 ATPase family associated with various cellular activities (AAA) THII_RS04800 PF01075 Glycosyltransferase family 9 (heptosyltransferase) THII_RS04805 PF01479 S4 domain THII_RS04805 PF00849 RNA pseudouridylate synthase THII_RS04835 PF01702 Queuine tRNA-ribosyltransferase THII_RS04840 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system THII_RS04845 PF10414 Sirohaem synthase dimerisation region THII_RS04845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THII_RS04845 PF14824 Sirohaem biosynthesis protein central THII_RS04850 PF01206 Sulfurtransferase TusA THII_RS04855 PF13686 DsrE/DsrF/DrsH-like family THII_RS04860 PF01565 FAD binding domain THII_RS04905 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 THII_RS04905 PF13665 Domain of unknown function (DUF4150) THII_RS04925 PF04717 Type VI secretion system, phage-baseplate injector THII_RS04925 PF06715 Gp5 C-terminal repeat (3 copies) THII_RS04935 PF03400 IS1 transposase THII_RS04975 PF06761 Intracellular multiplication and human macrophage-killing THII_RS04975 PF14331 ImcF-related N-terminal domain THII_RS04975 PF06744 Type VI secretion protein IcmF C-terminal THII_RS04980 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 THII_RS04985 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath THII_RS05000 PF05947 Type VI secretion system, TssF THII_RS05010 PF00004 ATPase family associated with various cellular activities (AAA) THII_RS05010 PF07724 AAA domain (Cdc48 subfamily) THII_RS05010 PF17871 AAA lid domain THII_RS05010 PF10431 C-terminal, D2-small domain, of ClpB protein THII_RS05025 PF00512 His Kinase A (phospho-acceptor) domain THII_RS05025 PF01627 Hpt domain THII_RS05025 PF00072 Response regulator receiver domain THII_RS05025 PF00672 HAMP domain THII_RS05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS05025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS05060 PF16123 Hydroxyacylglutathione hydrolase C-terminus THII_RS05060 PF00753 Metallo-beta-lactamase superfamily THII_RS05070 PF04225 Opacity-associated protein A LysM-like domain THII_RS05070 PF01551 Peptidase family M23 THII_RS05080 PF00579 tRNA synthetases class I (W and Y) THII_RS05085 PF00694 Aconitase C-terminal domain THII_RS05090 PF00180 Isocitrate/isopropylmalate dehydrogenase THII_RS05095 PF02774 Semialdehyde dehydrogenase, dimerisation domain THII_RS05095 PF01118 Semialdehyde dehydrogenase, NAD binding domain THII_RS05105 PF01416 tRNA pseudouridine synthase THII_RS05115 PF00072 Response regulator receiver domain THII_RS05115 PF00990 Diguanylate cyclase, GGDEF domain THII_RS05120 PF00731 AIR carboxylase THII_RS05125 PF02222 ATP-grasp domain THII_RS05125 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain THII_RS05130 PF04151 Bacterial pre-peptidase C-terminal domain THII_RS05130 PF02868 Thermolysin metallopeptidase, alpha-helical domain THII_RS05130 PF03413 Peptidase propeptide and YPEB domain THII_RS05130 PF01447 Thermolysin metallopeptidase, catalytic domain THII_RS05130 PF07504 Fungalysin/Thermolysin Propeptide Motif THII_RS05160 PF01661 Macro domain THII_RS05175 PF00668 Condensation domain THII_RS05175 PF13193 AMP-binding enzyme C-terminal domain THII_RS05175 PF00501 AMP-binding enzyme THII_RS05175 PF00550 Phosphopantetheine attachment site THII_RS05180 PF13649 Methyltransferase domain THII_RS05200 PF10609 NUBPL iron-transfer P-loop NTPase THII_RS05200 PF01883 Iron-sulfur cluster assembly protein THII_RS05205 PF01747 ATP-sulfurylase THII_RS05205 PF14306 PUA-like domain THII_RS05270 PF00534 Glycosyl transferases group 1 THII_RS05270 PF13439 Glycosyltransferase Family 4 THII_RS05325 PF01909 Nucleotidyltransferase domain THII_RS05330 PF08780 Nucleotidyltransferase substrate binding protein like THII_RS05365 PF00535 Glycosyl transferase family 2 THII_RS05405 PF00583 Acetyltransferase (GNAT) family THII_RS05405 PF13607 Succinyl-CoA ligase like flavodoxin domain THII_RS05405 PF13380 CoA binding domain THII_RS05415 PF01797 Transposase IS200 like THII_RS05430 PF00202 Aminotransferase class-III THII_RS05440 PF01223 DNA/RNA non-specific endonuclease THII_RS05450 PF02463 RecF/RecN/SMC N terminal domain THII_RS05460 PF00535 Glycosyl transferase family 2 THII_RS05490 PF01925 Sulfite exporter TauE/SafE THII_RS05505 PF13188 PAS domain THII_RS05505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS05505 PF08448 PAS fold THII_RS05505 PF00072 Response regulator receiver domain THII_RS05505 PF00512 His Kinase A (phospho-acceptor) domain THII_RS05510 PF00072 Response regulator receiver domain THII_RS05510 PF00158 Sigma-54 interaction domain THII_RS05510 PF02954 Bacterial regulatory protein, Fis family THII_RS05530 PF00092 von Willebrand factor type A domain THII_RS05565 PF00483 Nucleotidyl transferase THII_RS05570 PF07298 NnrU protein THII_RS05605 PF00535 Glycosyl transferase family 2 THII_RS05635 PF12323 Helix-turn-helix domain THII_RS05635 PF01385 Probable transposase THII_RS05635 PF07282 Putative transposase DNA-binding domain THII_RS05655 PF01769 Divalent cation transporter THII_RS05655 PF03448 MgtE intracellular N domain THII_RS05655 PF00571 CBS domain THII_RS05665 PF01928 CYTH domain THII_RS05670 PF01266 FAD dependent oxidoreductase THII_RS05690 PF01078 Magnesium chelatase, subunit ChlI THII_RS05690 PF13335 Magnesium chelatase, subunit ChlI C-terminal THII_RS05695 PF04380 Membrane fusogenic activity THII_RS05700 PF02677 Epoxyqueuosine reductase QueH THII_RS05715 PF02472 Biopolymer transport protein ExbD/TolR THII_RS05720 PF01618 MotA/TolQ/ExbB proton channel family THII_RS05755 PF14602 Hexapeptide repeat of succinyl-transferase THII_RS05755 PF00132 Bacterial transferase hexapeptide (six repeats) THII_RS05755 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal THII_RS05760 PF00155 Aminotransferase class I and II THII_RS05765 PF02576 RimP N-terminal domain THII_RS05765 PF17384 RimP C-terminal SH3 domain THII_RS05770 PF08529 NusA N-terminal domain THII_RS05770 PF13184 NusA-like KH domain THII_RS05775 PF04760 Translation initiation factor IF-2, N-terminal region THII_RS05775 PF00009 Elongation factor Tu GTP binding domain THII_RS05775 PF11987 Translation-initiation factor 2 THII_RS05780 PF02033 Ribosome-binding factor A THII_RS05785 PF16198 tRNA pseudouridylate synthase B C-terminal domain THII_RS05785 PF09157 Pseudouridine synthase II TruB, C-terminal THII_RS05785 PF01509 TruB family pseudouridylate synthase (N terminal domain) THII_RS05790 PF00312 Ribosomal protein S15 THII_RS05795 PF00575 S1 RNA binding domain THII_RS05795 PF00013 KH domain THII_RS05795 PF03725 3' exoribonuclease family, domain 2 THII_RS05795 PF01138 3' exoribonuclease family, domain 1 THII_RS05795 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain THII_RS05835 PF13426 PAS domain THII_RS05835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS05835 PF00072 Response regulator receiver domain THII_RS05835 PF00512 His Kinase A (phospho-acceptor) domain THII_RS05835 PF08448 PAS fold THII_RS05845 PF01627 Hpt domain THII_RS05845 PF00512 His Kinase A (phospho-acceptor) domain THII_RS05845 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS05845 PF00072 Response regulator receiver domain THII_RS05845 PF00672 HAMP domain THII_RS05845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS05865 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 THII_RS05865 PF00953 Glycosyl transferase family 4 THII_RS05870 PF02875 Mur ligase family, glutamate ligase domain THII_RS05870 PF01225 Mur ligase family, catalytic domain THII_RS05870 PF08245 Mur ligase middle domain THII_RS05875 PF08245 Mur ligase middle domain THII_RS05875 PF01225 Mur ligase family, catalytic domain THII_RS05875 PF02875 Mur ligase family, glutamate ligase domain THII_RS05885 PF01795 MraW methylase family THII_RS05890 PF00795 Carbon-nitrogen hydrolase THII_RS05905 PF00528 Binding-protein-dependent transport system inner membrane component THII_RS05910 PF03459 TOBE domain THII_RS05910 PF00005 ABC transporter THII_RS05925 PF07549 SecD/SecF GG Motif THII_RS05925 PF02355 Protein export membrane protein THII_RS05930 PF07549 SecD/SecF GG Motif THII_RS05930 PF13721 SecD export protein N-terminal TM region THII_RS05930 PF02355 Protein export membrane protein THII_RS05935 PF02699 Preprotein translocase subunit THII_RS05940 PF00291 Pyridoxal-phosphate dependent enzyme THII_RS05945 PF05685 Putative restriction endonuclease THII_RS05950 PF01751 Toprim domain THII_RS05950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS05950 PF18053 DNA gyrase B subunit insert domain THII_RS05950 PF00986 DNA gyrase B subunit, carboxyl terminus THII_RS05950 PF00204 DNA gyrase B THII_RS05970 PF00570 HRDC domain THII_RS05970 PF00271 Helicase conserved C-terminal domain THII_RS05970 PF16124 RecQ zinc-binding THII_RS05970 PF09382 RQC domain THII_RS05970 PF00270 DEAD/DEAH box helicase THII_RS05975 PF04235 Protein of unknown function (DUF418) THII_RS05980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THII_RS05980 PF02874 ATP synthase alpha/beta family, beta-barrel domain THII_RS05980 PF16886 ATPsynthase alpha/beta subunit N-term extension THII_RS06005 PF00535 Glycosyl transferase family 2 THII_RS06015 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase THII_RS06035 PF00561 alpha/beta hydrolase fold THII_RS06045 PF01915 Glycosyl hydrolase family 3 C-terminal domain THII_RS06045 PF00933 Glycosyl hydrolase family 3 N terminal domain THII_RS06060 PF01207 Dihydrouridine synthase (Dus) THII_RS06065 PF00588 SpoU rRNA Methylase family THII_RS06065 PF08032 RNA 2'-O ribose methyltransferase substrate binding THII_RS06070 PF09225 Restriction endonuclease PvuII THII_RS06080 PF01555 DNA methylase THII_RS06085 PF00072 Response regulator receiver domain THII_RS06085 PF00512 His Kinase A (phospho-acceptor) domain THII_RS06085 PF09308 LuxQ, periplasmic THII_RS06085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS06095 PF17768 RecJ OB domain THII_RS06095 PF02272 DHHA1 domain THII_RS06095 PF01368 DHH family THII_RS06115 PF00291 Pyridoxal-phosphate dependent enzyme THII_RS06115 PF00585 C-terminal regulatory domain of Threonine dehydratase THII_RS06120 PF14489 QueF-like protein THII_RS06125 PF02603 HPr Serine kinase N terminus THII_RS06125 PF07475 HPr Serine kinase C-terminal domain THII_RS06130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 THII_RS06135 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein THII_RS06140 PF04963 Sigma-54 factor, core binding domain THII_RS06140 PF00309 Sigma-54 factor, Activator interacting domain (AID) THII_RS06140 PF04552 Sigma-54, DNA binding domain THII_RS06145 PF00005 ABC transporter THII_RS06145 PF12399 Branched-chain amino acid ATP-binding cassette transporter THII_RS06150 PF03968 OstA-like protein THII_RS06165 PF00571 CBS domain THII_RS06165 PF01380 SIS domain THII_RS06215 PF00152 tRNA synthetases class II (D, K and N) THII_RS06220 PF00814 Glycoprotease family THII_RS06225 PF01367 5'-3' exonuclease, C-terminal SAM fold THII_RS06225 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain THII_RS06225 PF00476 DNA polymerase family A THII_RS06225 PF01612 3'-5' exonuclease THII_RS06240 PF04321 RmlD substrate binding domain THII_RS06250 PF16363 GDP-mannose 4,6 dehydratase THII_RS06255 PF13580 SIS domain THII_RS06260 PF10145 Phage-related minor tail protein THII_RS06260 PF01551 Peptidase family M23 THII_RS06260 PF01464 Transglycosylase SLT domain THII_RS06265 PF01208 Uroporphyrinogen decarboxylase (URO-D) THII_RS06280 PF01515 Phosphate acetyl/butaryl transferase THII_RS06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS06290 PF01627 Hpt domain THII_RS06290 PF01584 CheW-like domain THII_RS06290 PF00072 Response regulator receiver domain THII_RS06290 PF02895 Signal transducing histidine kinase, homodimeric domain THII_RS06300 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term THII_RS06300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS06305 PF01584 CheW-like domain THII_RS06310 PF00072 Response regulator receiver domain THII_RS06315 PF00072 Response regulator receiver domain THII_RS06355 PF00156 Phosphoribosyl transferase domain THII_RS06360 PF01053 Cys/Met metabolism PLP-dependent enzyme THII_RS06370 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus THII_RS06375 PF00773 RNB domain THII_RS06385 PF00994 Probable molybdopterin binding domain THII_RS06390 PF00175 Oxidoreductase NAD-binding domain THII_RS06390 PF00111 2Fe-2S iron-sulfur cluster binding domain THII_RS06390 PF00970 Oxidoreductase FAD-binding domain THII_RS06400 PF03739 Lipopolysaccharide export system permease LptF/LptG THII_RS06405 PF00883 Cytosol aminopeptidase family, catalytic domain THII_RS06405 PF02789 Cytosol aminopeptidase family, N-terminal domain THII_RS06425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THII_RS06425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THII_RS06425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THII_RS06425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THII_RS06430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THII_RS06430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THII_RS06430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THII_RS06430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THII_RS06440 PF12704 MacB-like periplasmic core domain THII_RS06440 PF02687 FtsX-like permease family THII_RS06445 PF00005 ABC transporter THII_RS06455 PF00211 Adenylate and Guanylate cyclase catalytic domain THII_RS06460 PF01008 Initiation factor 2 subunit family THII_RS06470 PF04348 LppC putative lipoprotein THII_RS06475 PF02021 Uncharacterised protein family UPF0102 THII_RS06480 PF00005 ABC transporter THII_RS06500 PF01435 Peptidase family M48 THII_RS06510 PF02706 Chain length determinant protein THII_RS06510 PF13614 AAA domain THII_RS06510 PF13807 G-rich domain on putative tyrosine kinase THII_RS06515 PF07690 Major Facilitator Superfamily THII_RS06520 PF00436 Single-strand binding protein family THII_RS06525 PF01725 Ham1 family THII_RS06530 PF00929 Exonuclease THII_RS06535 PF00293 NUDIX domain THII_RS06540 PF00977 Histidine biosynthesis protein THII_RS06545 PF00977 Histidine biosynthesis protein THII_RS06555 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase THII_RS06570 PF02416 mttA/Hcf106 family THII_RS06575 PF02416 mttA/Hcf106 family THII_RS06580 PF00902 Sec-independent protein translocase protein (TatC) THII_RS06600 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase THII_RS06605 PF00483 Nucleotidyl transferase THII_RS06610 PF16363 GDP-mannose 4,6 dehydratase THII_RS06630 PF00873 AcrB/AcrD/AcrF family THII_RS06695 PF00072 Response regulator receiver domain THII_RS06705 PF00348 Polyprenyl synthetase THII_RS06740 PF00199 Catalase THII_RS06740 PF06628 Catalase-related immune-responsive THII_RS06750 PF01252 Signal peptidase (SPase) II THII_RS06755 PF00133 tRNA synthetases class I (I, L, M and V) THII_RS06755 PF06827 Zinc finger found in FPG and IleRS THII_RS06755 PF08264 Anticodon-binding domain of tRNA THII_RS06760 PF02810 SEC-C motif THII_RS06760 PF07517 SecA DEAD-like domain THII_RS06760 PF01043 SecA preprotein cross-linking domain THII_RS06760 PF07516 SecA Wing and Scaffold domain THII_RS06765 PF01960 ArgJ family THII_RS06770 PF02581 Thiamine monophosphate synthase THII_RS06780 PF00535 Glycosyl transferase family 2 THII_RS06800 PF00581 Rhodanese-like domain THII_RS06800 PF00899 ThiF family THII_RS06810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THII_RS06820 PF00528 Binding-protein-dependent transport system inner membrane component THII_RS06825 PF00528 Binding-protein-dependent transport system inner membrane component THII_RS06825 PF12911 N-terminal TM domain of oligopeptide transport permease C THII_RS06835 PF01627 Hpt domain THII_RS06835 PF00512 His Kinase A (phospho-acceptor) domain THII_RS06835 PF00072 Response regulator receiver domain THII_RS06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS06840 PF00072 Response regulator receiver domain THII_RS06845 PF00334 Nucleoside diphosphate kinase THII_RS06850 PF04055 Radical SAM superfamily THII_RS06860 PF13464 Domain of unknown function (DUF4115) THII_RS06865 PF04551 GcpE protein THII_RS06880 PF01967 MoaC family THII_RS06890 PF00271 Helicase conserved C-terminal domain THII_RS06890 PF00270 DEAD/DEAH box helicase THII_RS06915 PF01411 tRNA synthetases class II (A) THII_RS06915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THII_RS06915 PF02272 DHHA1 domain THII_RS06920 PF02631 RecX family THII_RS06925 PF03161 LAGLIDADG DNA endonuclease family THII_RS06925 PF00154 recA bacterial DNA recombination protein THII_RS06950 PF00403 Heavy-metal-associated domain THII_RS06960 PF00291 Pyridoxal-phosphate dependent enzyme THII_RS06980 PF01176 Translation initiation factor 1A / IF-1 THII_RS06985 PF01451 Low molecular weight phosphotyrosine protein phosphatase THII_RS06990 PF03966 Trm112p-like protein THII_RS06995 PF02606 Tetraacyldisaccharide-1-P 4'-kinase THII_RS07000 PF02472 Biopolymer transport protein ExbD/TolR THII_RS07005 PF01618 MotA/TolQ/ExbB proton channel family THII_RS07010 PF00586 AIR synthase related protein, N-terminal domain THII_RS07010 PF02769 AIR synthase related protein, C-terminal domain THII_RS07015 PF00999 Sodium/hydrogen exchanger family THII_RS07035 PF13847 Methyltransferase domain THII_RS07035 PF10119 Predicted methyltransferase regulatory domain THII_RS07050 PF00152 tRNA synthetases class II (D, K and N) THII_RS07050 PF02938 GAD domain THII_RS07050 PF01336 OB-fold nucleic acid binding domain THII_RS07065 PF00342 Phosphoglucose isomerase THII_RS07070 PF02446 4-alpha-glucanotransferase THII_RS07080 PF00483 Nucleotidyl transferase THII_RS07085 PF00171 Aldehyde dehydrogenase family THII_RS07130 PF00069 Protein kinase domain THII_RS07130 PF03793 PASTA domain THII_RS07135 PF00672 HAMP domain THII_RS07135 PF00211 Adenylate and Guanylate cyclase catalytic domain THII_RS07145 PF00300 Histidine phosphatase superfamily (branch 1) THII_RS07150 PF03372 Endonuclease/Exonuclease/phosphatase family THII_RS07155 PF05193 Peptidase M16 inactive domain THII_RS07155 PF00675 Insulinase (Peptidase family M16) THII_RS07160 PF00675 Insulinase (Peptidase family M16) THII_RS07160 PF05193 Peptidase M16 inactive domain THII_RS07165 PF00156 Phosphoribosyl transferase domain THII_RS07175 PF00924 Mechanosensitive ion channel THII_RS07175 PF12795 Mechanosensitive ion channel porin domain THII_RS07175 PF12794 Mechanosensitive ion channel inner membrane domain 1 THII_RS07185 PF02779 Transketolase, pyrimidine binding domain THII_RS07185 PF13292 1-deoxy-D-xylulose-5-phosphate synthase THII_RS07185 PF02780 Transketolase, C-terminal domain THII_RS07190 PF02649 Type I GTP cyclohydrolase folE2 THII_RS07195 PF02578 Multi-copper polyphenol oxidoreductase laccase THII_RS07215 PF11612 Type II secretion system (T2SS), protein J THII_RS07215 PF07963 Prokaryotic N-terminal methylation motif THII_RS07220 PF00085 Thioredoxin THII_RS07225 PF04055 Radical SAM superfamily THII_RS07230 PF03099 Biotin/lipoate A/B protein ligase family THII_RS07235 PF03350 Uncharacterized protein family, UPF0114 THII_RS07275 PF00873 AcrB/AcrD/AcrF family THII_RS07300 PF05690 Thiazole biosynthesis protein ThiG THII_RS07300 PF02597 ThiS family THII_RS07310 PF00166 Chaperonin 10 Kd subunit THII_RS07315 PF00118 TCP-1/cpn60 chaperonin family THII_RS07320 PF01040 UbiA prenyltransferase family THII_RS07330 PF00462 Glutaredoxin THII_RS07335 PF01053 Cys/Met metabolism PLP-dependent enzyme THII_RS07340 PF02824 TGS domain THII_RS07340 PF13291 ACT domain THII_RS07340 PF04607 Region found in RelA / SpoT proteins THII_RS07365 PF00034 Cytochrome c THII_RS07365 PF03150 Di-haem cytochrome c peroxidase THII_RS07380 PF00005 ABC transporter THII_RS07380 PF00664 ABC transporter transmembrane region THII_RS07420 PF14403 Circularly permuted ATP-grasp type 2 THII_RS07430 PF07720 Tetratricopeptide repeat THII_RS07430 PF01435 Peptidase family M48 THII_RS07440 PF01627 Hpt domain THII_RS07440 PF00072 Response regulator receiver domain THII_RS07440 PF00672 HAMP domain THII_RS07440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS07440 PF00512 His Kinase A (phospho-acceptor) domain THII_RS07440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS07475 PF00374 Nickel-dependent hydrogenase THII_RS07480 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THII_RS07485 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THII_RS07490 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THII_RS07490 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THII_RS07495 PF04052 TolB amino-terminal domain THII_RS07495 PF07676 WD40-like Beta Propeller Repeat THII_RS07510 PF02472 Biopolymer transport protein ExbD/TolR THII_RS07515 PF01618 MotA/TolQ/ExbB proton channel family THII_RS07520 PF03061 Thioesterase superfamily THII_RS07525 PF05496 Holliday junction DNA helicase RuvB P-loop domain THII_RS07525 PF05491 RuvB C-terminal winged helix domain THII_RS07525 PF17864 RuvB AAA lid domain THII_RS07530 PF00034 Cytochrome c THII_RS07535 PF01323 DSBA-like thioredoxin domain THII_RS07550 PF01042 Endoribonuclease L-PSP THII_RS07555 PF00271 Helicase conserved C-terminal domain THII_RS07555 PF00270 DEAD/DEAH box helicase THII_RS07555 PF17191 RecG wedge domain THII_RS07565 PF02397 Bacterial sugar transferase THII_RS07575 PF01590 GAF domain THII_RS07575 PF00563 EAL domain THII_RS07575 PF00360 Phytochrome region THII_RS07575 PF00990 Diguanylate cyclase, GGDEF domain THII_RS07580 PF00474 Sodium:solute symporter family THII_RS07585 PF00849 RNA pseudouridylate synthase THII_RS07585 PF01479 S4 domain THII_RS07590 PF13525 Outer membrane lipoprotein THII_RS07600 PF01432 Peptidase family M3 THII_RS07605 PF00343 Carbohydrate phosphorylase THII_RS07610 PF00361 Proton-conducting membrane transporter THII_RS07615 PF00146 NADH dehydrogenase THII_RS07640 PF00501 AMP-binding enzyme THII_RS07640 PF13193 AMP-binding enzyme C-terminal domain THII_RS07640 PF16177 Acetyl-coenzyme A synthetase N-terminus THII_RS07680 PF02548 Ketopantoate hydroxymethyltransferase THII_RS07685 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) THII_RS07690 PF12626 Polymerase A arginine-rich C-terminus THII_RS07690 PF12627 Probable RNA and SrmB- binding site of polymerase A THII_RS07690 PF01743 Poly A polymerase head domain THII_RS07695 PF00830 Ribosomal L28 family THII_RS07700 PF00132 Bacterial transferase hexapeptide (six repeats) THII_RS07705 PF02634 FdhD/NarQ family THII_RS07710 PF04055 Radical SAM superfamily THII_RS07710 PF06463 Molybdenum Cofactor Synthesis C THII_RS07715 PF13847 Methyltransferase domain THII_RS07715 PF10119 Predicted methyltransferase regulatory domain THII_RS07720 PF00072 Response regulator receiver domain THII_RS07720 PF00486 Transcriptional regulatory protein, C terminal THII_RS07725 PF13493 Domain of unknown function (DUF4118) THII_RS07725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS07725 PF02702 Osmosensitive K+ channel His kinase sensor domain THII_RS07725 PF13492 GAF domain THII_RS07725 PF00512 His Kinase A (phospho-acceptor) domain THII_RS07745 PF12627 Probable RNA and SrmB- binding site of polymerase A THII_RS07745 PF01966 HD domain THII_RS07745 PF01743 Poly A polymerase head domain THII_RS07750 PF08338 Domain of unknown function (DUF1731) THII_RS07750 PF01370 NAD dependent epimerase/dehydratase family THII_RS07785 PF00211 Adenylate and Guanylate cyclase catalytic domain THII_RS07785 PF00672 HAMP domain THII_RS07795 PF00497 Bacterial extracellular solute-binding proteins, family 3 THII_RS07795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS07795 PF00512 His Kinase A (phospho-acceptor) domain THII_RS07805 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 THII_RS07805 PF13665 Domain of unknown function (DUF4150) THII_RS07825 PF03109 ABC1 family THII_RS07840 PF01209 ubiE/COQ5 methyltransferase family THII_RS07850 PF00004 ATPase family associated with various cellular activities (AAA) THII_RS07850 PF07724 AAA domain (Cdc48 subfamily) THII_RS07850 PF10431 C-terminal, D2-small domain, of ClpB protein THII_RS07855 PF00227 Proteasome subunit THII_RS07860 PF01636 Phosphotransferase enzyme family THII_RS07865 PF03641 Possible lysine decarboxylase THII_RS07890 PF00664 ABC transporter transmembrane region THII_RS07890 PF00005 ABC transporter THII_RS07890 PF03412 Peptidase C39 family THII_RS07935 PF00115 Cytochrome C and Quinol oxidase polypeptide I THII_RS07950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III THII_RS07950 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP THII_RS07955 PF02554 Carbon starvation protein CstA THII_RS07955 PF13722 5TM C-terminal transporter carbon starvation CstA THII_RS07980 PF00072 Response regulator receiver domain THII_RS07980 PF00486 Transcriptional regulatory protein, C terminal THII_RS07985 PF00672 HAMP domain THII_RS07985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS07985 PF00512 His Kinase A (phospho-acceptor) domain THII_RS08005 PF00691 OmpA family THII_RS08005 PF01389 OmpA-like transmembrane domain THII_RS08015 PF09308 LuxQ, periplasmic THII_RS08015 PF00512 His Kinase A (phospho-acceptor) domain THII_RS08015 PF00072 Response regulator receiver domain THII_RS08015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS08025 PF01808 AICARFT/IMPCHase bienzyme THII_RS08025 PF02142 MGS-like domain THII_RS08030 PF00459 Inositol monophosphatase family THII_RS08035 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system THII_RS08090 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain THII_RS08090 PF01565 FAD binding domain THII_RS08100 PF16363 GDP-mannose 4,6 dehydratase THII_RS08145 PF00535 Glycosyl transferase family 2 THII_RS08170 PF00005 ABC transporter THII_RS08175 PF00664 ABC transporter transmembrane region THII_RS08175 PF00005 ABC transporter THII_RS08205 PF01568 Molydopterin dinucleotide binding domain THII_RS08205 PF00384 Molybdopterin oxidoreductase THII_RS08210 PF13247 4Fe-4S dicluster domain THII_RS08265 PF01578 Cytochrome C assembly protein THII_RS08280 PF00675 Insulinase (Peptidase family M16) THII_RS08280 PF08367 Peptidase M16C associated THII_RS08280 PF05193 Peptidase M16 inactive domain THII_RS08300 PF10518 TAT (twin-arginine translocation) pathway signal sequence THII_RS08300 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding THII_RS08300 PF07992 Pyridine nucleotide-disulphide oxidoreductase THII_RS08315 PF03264 NapC/NirT cytochrome c family, N-terminal region THII_RS08320 PF00483 Nucleotidyl transferase THII_RS08325 PF16363 GDP-mannose 4,6 dehydratase THII_RS08330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THII_RS08335 PF01370 NAD dependent epimerase/dehydratase family THII_RS08340 PF16363 GDP-mannose 4,6 dehydratase THII_RS08350 PF00535 Glycosyl transferase family 2 THII_RS08380 PF00535 Glycosyl transferase family 2 THII_RS08385 PF00534 Glycosyl transferases group 1 THII_RS08385 PF13439 Glycosyltransferase Family 4 THII_RS08390 PF00534 Glycosyl transferases group 1 THII_RS08390 PF13439 Glycosyltransferase Family 4 THII_RS08395 PF00132 Bacterial transferase hexapeptide (six repeats) THII_RS08395 PF12464 Maltose acetyltransferase THII_RS08415 PF13579 Glycosyl transferase 4-like domain THII_RS08415 PF00534 Glycosyl transferases group 1 THII_RS08420 PF01975 Survival protein SurE THII_RS08425 PF02754 Cysteine-rich domain THII_RS08425 PF13183 4Fe-4S dicluster domain THII_RS08430 PF00107 Zinc-binding dehydrogenase THII_RS08430 PF08240 Alcohol dehydrogenase GroES-like domain THII_RS08435 PF02834 LigT like Phosphoesterase THII_RS08445 PF07992 Pyridine nucleotide-disulphide oxidoreductase THII_RS08450 PF00482 Type II secretion system (T2SS), protein F THII_RS08480 PF13086 AAA domain THII_RS08480 PF13195 Protein of unknown function (DUF4011) THII_RS08480 PF13087 AAA domain THII_RS08480 PF13086 AAA domain THII_RS08480 PF13087 AAA domain THII_RS08480 PF13195 Protein of unknown function (DUF4011) THII_RS08510 PF02684 Lipid-A-disaccharide synthetase THII_RS08515 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 THII_RS08515 PF00132 Bacterial transferase hexapeptide (six repeats) THII_RS08520 PF07977 FabA-like domain THII_RS08525 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD THII_RS08525 PF00132 Bacterial transferase hexapeptide (six repeats) THII_RS08535 PF07244 Surface antigen variable number repeat THII_RS08535 PF01103 Surface antigen THII_RS08540 PF17820 PDZ domain THII_RS08540 PF02163 Peptidase family M50 THII_RS08545 PF13288 DXP reductoisomerase C-terminal domain THII_RS08545 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase THII_RS08545 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain THII_RS08555 PF01255 Putative undecaprenyl diphosphate synthase THII_RS08560 PF01765 Ribosome recycling factor THII_RS08565 PF00696 Amino acid kinase family THII_RS08570 PF00889 Elongation factor TS THII_RS08575 PF00318 Ribosomal protein S2 THII_RS08580 PF00557 Metallopeptidase family M24 THII_RS08585 PF00899 ThiF family THII_RS08590 PF02597 ThiS family THII_RS08595 PF02391 MoaE protein THII_RS08610 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain THII_RS08610 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THII_RS08610 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain THII_RS08615 PF00899 ThiF family THII_RS08620 PF03922 OmpW family THII_RS08655 PF02463 RecF/RecN/SMC N terminal domain THII_RS08660 PF12804 MobA-like NTP transferase domain THII_RS08660 PF00132 Bacterial transferase hexapeptide (six repeats) THII_RS08685 PF00325 Bacterial regulatory proteins, crp family THII_RS08685 PF00027 Cyclic nucleotide-binding domain THII_RS08695 PF03023 Lipid II flippase MurJ THII_RS08700 PF06574 FAD synthetase THII_RS08700 PF01687 Riboflavin kinase THII_RS08720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS08720 PF00672 HAMP domain THII_RS08720 PF00989 PAS fold THII_RS08720 PF00512 His Kinase A (phospho-acceptor) domain THII_RS08720 PF18698 Histidine kinase sensor domain THII_RS08725 PF04324 BFD-like [2Fe-2S] binding domain THII_RS08725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain THII_RS08725 PF00384 Molybdopterin oxidoreductase THII_RS08725 PF01568 Molydopterin dinucleotide binding domain THII_RS08740 PF00355 Rieske [2Fe-2S] domain THII_RS08745 PF18267 Rubredoxin NAD+ reductase C-terminal domain THII_RS08745 PF04324 BFD-like [2Fe-2S] binding domain THII_RS08745 PF07992 Pyridine nucleotide-disulphide oxidoreductase THII_RS08745 PF01077 Nitrite and sulphite reductase 4Fe-4S domain THII_RS08745 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THII_RS08750 PF07690 Major Facilitator Superfamily THII_RS08755 PF00005 ABC transporter THII_RS08760 PF08376 Nitrate and nitrite sensing THII_RS08760 PF03861 ANTAR domain THII_RS08780 PF00005 ABC transporter THII_RS08785 PF01032 FecCD transport family THII_RS08805 PF00795 Carbon-nitrogen hydrolase THII_RS08815 PF03471 Transporter associated domain THII_RS08815 PF00571 CBS domain THII_RS08820 PF02130 Uncharacterized protein family UPF0054 THII_RS08825 PF02562 PhoH-like protein THII_RS08830 PF04055 Radical SAM superfamily THII_RS08830 PF00919 Uncharacterized protein family UPF0004 THII_RS08830 PF01938 TRAM domain THII_RS08835 PF12849 PBP superfamily domain THII_RS08840 PF01171 PP-loop family THII_RS08845 PF00581 Rhodanese-like domain THII_RS08855 PF18074 Primosomal protein N C-terminal domain THII_RS08855 PF00270 DEAD/DEAH box helicase THII_RS08855 PF18319 PriA DNA helicase Cys-rich region (CRR) domain THII_RS08855 PF17764 3′ DNA-binding domain (3′BD) THII_RS08855 PF00271 Helicase conserved C-terminal domain THII_RS08870 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family THII_RS08875 PF00148 Nitrogenase component 1 type Oxidoreductase THII_RS08880 PF11844 Domain of unknown function (DUF3364) THII_RS08880 PF00148 Nitrogenase component 1 type Oxidoreductase THII_RS08885 PF06988 NifT/FixU protein THII_RS08890 PF00037 4Fe-4S binding domain THII_RS08895 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal THII_RS08895 PF02579 Dinitrogenase iron-molybdenum cofactor THII_RS08905 PF00148 Nitrogenase component 1 type Oxidoreductase THII_RS08910 PF00148 Nitrogenase component 1 type Oxidoreductase THII_RS08915 PF02579 Dinitrogenase iron-molybdenum cofactor THII_RS08925 PF03270 Protein of unknown function, DUF269 THII_RS08930 PF12838 4Fe-4S dicluster domain THII_RS08955 PF00330 Aconitase family (aconitate hydratase) THII_RS08965 PF01351 Ribonuclease HII THII_RS08980 PF05164 Cell division protein ZapA THII_RS08985 PF00437 Type II/IV secretion system protein THII_RS08995 PF01797 Transposase IS200 like THII_RS09000 PF00155 Aminotransferase class I and II THII_RS09010 PF01751 Toprim domain THII_RS09010 PF00204 DNA gyrase B THII_RS09010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS09010 PF00986 DNA gyrase B subunit, carboxyl terminus THII_RS09015 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system THII_RS09020 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system THII_RS09025 PF02547 Queuosine biosynthesis protein THII_RS09075 PF00999 Sodium/hydrogen exchanger family THII_RS09080 PF00072 Response regulator receiver domain THII_RS09080 PF00990 Diguanylate cyclase, GGDEF domain THII_RS09085 PF04358 DsrC like protein THII_RS09090 PF00072 Response regulator receiver domain THII_RS09100 PF04390 Lipopolysaccharide-assembly THII_RS09105 PF08264 Anticodon-binding domain of tRNA THII_RS09105 PF09334 tRNA synthetases class I (M) THII_RS09105 PF00133 tRNA synthetases class I (I, L, M and V) THII_RS09105 PF13603 Leucyl-tRNA synthetase, Domain 2 THII_RS09115 PF17785 PUA-like domain THII_RS09115 PF10672 S-adenosylmethionine-dependent methyltransferase THII_RS09150 PF00330 Aconitase family (aconitate hydratase) THII_RS09150 PF06434 Aconitate hydratase 2 N-terminus THII_RS09150 PF11791 Aconitate B N-terminal domain THII_RS09190 PF03819 MazG nucleotide pyrophosphohydrolase domain THII_RS09205 PF00456 Transketolase, thiamine diphosphate binding domain THII_RS09210 PF02780 Transketolase, C-terminal domain THII_RS09210 PF02779 Transketolase, pyrimidine binding domain THII_RS09215 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain THII_RS09225 PF00749 tRNA synthetases class I (E and Q), catalytic domain THII_RS09235 PF17243 POTRA domain TamA domain 1 THII_RS09235 PF07244 Surface antigen variable number repeat THII_RS09235 PF01103 Surface antigen THII_RS09245 PF02558 Ketopantoate reductase PanE/ApbA THII_RS09245 PF08546 Ketopantoate reductase PanE/ApbA C terminal THII_RS09250 PF01871 AMMECR1 THII_RS09255 PF01875 Memo-like protein THII_RS09275 PF03205 Molybdopterin guanine dinucleotide synthesis protein B THII_RS09280 PF12804 MobA-like NTP transferase domain THII_RS09285 PF00266 Aminotransferase class-V THII_RS09305 PF04542 Sigma-70 region 2 THII_RS09305 PF08281 Sigma-70, region 4 THII_RS09315 PF17991 Thioredoxin like C-terminal domain THII_RS09315 PF02683 Cytochrome C biogenesis protein transmembrane region THII_RS09315 PF00578 AhpC/TSA family THII_RS09325 PF04069 Substrate binding domain of ABC-type glycine betaine transport system THII_RS09330 PF00528 Binding-protein-dependent transport system inner membrane component THII_RS09335 PF00005 ABC transporter THII_RS09335 PF00571 CBS domain THII_RS09340 PF08241 Methyltransferase domain THII_RS09345 PF13649 Methyltransferase domain THII_RS09350 PF13649 Methyltransferase domain THII_RS09365 PF01170 Putative RNA methylase family UPF0020 THII_RS09365 PF10672 S-adenosylmethionine-dependent methyltransferase THII_RS09365 PF02926 THUMP domain THII_RS09370 PF01165 Ribosomal protein S21 THII_RS09380 PF10410 DnaB-helicase binding domain of primase THII_RS09380 PF13662 Toprim domain THII_RS09380 PF08275 DNA primase catalytic core, N-terminal domain THII_RS09380 PF01807 CHC2 zinc finger THII_RS09380 PF08278 DNA primase DnaG DnaB-binding THII_RS09385 PF04546 Sigma-70, non-essential region THII_RS09385 PF03979 Sigma-70 factor, region 1.1 THII_RS09385 PF00140 Sigma-70 factor, region 1.2 THII_RS09385 PF04542 Sigma-70 region 2 THII_RS09385 PF04539 Sigma-70 region 3 THII_RS09385 PF04545 Sigma-70, region 4 THII_RS09390 PF01113 Dihydrodipicolinate reductase, N-terminus THII_RS09390 PF05173 Dihydrodipicolinate reductase, C-terminus THII_RS09405 PF00535 Glycosyl transferase family 2 THII_RS09410 PF13188 PAS domain THII_RS09410 PF03707 Bacterial signalling protein N terminal repeat THII_RS09410 PF00990 Diguanylate cyclase, GGDEF domain THII_RS09410 PF00563 EAL domain THII_RS09415 PF00850 Histone deacetylase domain THII_RS09420 PF03441 FAD binding domain of DNA photolyase THII_RS09420 PF00875 DNA photolyase THII_RS09430 PF12848 ABC transporter THII_RS09430 PF00005 ABC transporter THII_RS09440 PF01813 ATP synthase subunit D THII_RS09445 PF00156 Phosphoribosyl transferase domain THII_RS09450 PF01578 Cytochrome C assembly protein THII_RS09460 PF00905 Penicillin binding protein transpeptidase domain THII_RS09460 PF14814 Bifunctional transglycosylase second domain THII_RS09460 PF00912 Transglycosylase THII_RS09475 PF01739 CheR methyltransferase, SAM binding domain THII_RS09485 PF01584 CheW-like domain THII_RS09485 PF02895 Signal transducing histidine kinase, homodimeric domain THII_RS09485 PF01627 Hpt domain THII_RS09485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS09485 PF00072 Response regulator receiver domain THII_RS09490 PF01339 CheB methylesterase THII_RS09490 PF00072 Response regulator receiver domain THII_RS09495 PF00211 Adenylate and Guanylate cyclase catalytic domain THII_RS09495 PF00072 Response regulator receiver domain THII_RS09540 PF04255 Protein of unknown function (DUF433) THII_RS09595 PF00072 Response regulator receiver domain THII_RS09595 PF09308 LuxQ, periplasmic THII_RS09595 PF00512 His Kinase A (phospho-acceptor) domain THII_RS09595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS09630 PF00990 Diguanylate cyclase, GGDEF domain THII_RS09635 PF17854 FtsK alpha domain THII_RS09635 PF09397 Ftsk gamma domain THII_RS09635 PF01580 FtsK/SpoIIIE family THII_RS09635 PF13491 4TM region of DNA translocase FtsK/SpoIIIE THII_RS09645 PF13847 Methyltransferase domain THII_RS09650 PF04379 ApaG domain THII_RS09670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA THII_RS09675 PF00639 PPIC-type PPIASE domain THII_RS09675 PF09312 SurA N-terminal domain THII_RS09705 PF00005 ABC transporter THII_RS09705 PF13732 Domain of unknown function (DUF4162) THII_RS09710 PF07728 AAA domain (dynein-related subfamily) THII_RS09710 PF08406 CbbQ/NirQ/NorQ C-terminal THII_RS09720 PF00462 Glutaredoxin THII_RS09730 PF00691 OmpA family THII_RS09745 PF00117 Glutamine amidotransferase class-I THII_RS09750 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain THII_RS09750 PF00437 Type II/IV secretion system protein THII_RS09755 PF00482 Type II secretion system (T2SS), protein F THII_RS09760 PF06750 Bacterial Peptidase A24 N-terminal domain THII_RS09760 PF01478 Type IV leader peptidase family THII_RS09765 PF01121 Dephospho-CoA kinase THII_RS09770 PF07072 Cell division protein THII_RS09780 PF00072 Response regulator receiver domain THII_RS09800 PF01627 Hpt domain THII_RS09800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS09800 PF02895 Signal transducing histidine kinase, homodimeric domain THII_RS09800 PF01584 CheW-like domain THII_RS09800 PF00072 Response regulator receiver domain THII_RS09815 PF03747 ADP-ribosylglycohydrolase THII_RS09860 PF01850 PIN domain THII_RS09870 PF01381 Helix-turn-helix THII_RS09975 PF00004 ATPase family associated with various cellular activities (AAA) THII_RS09975 PF17866 AAA lid domain THII_RS10045 PF01909 Nucleotidyltransferase domain THII_RS10105 PF00089 Trypsin THII_RS10115 PF17757 UvrB interaction domain THII_RS10115 PF03461 TRCF domain THII_RS10115 PF00271 Helicase conserved C-terminal domain THII_RS10115 PF00270 DEAD/DEAH box helicase THII_RS10115 PF02559 CarD-like/TRCF domain THII_RS10120 PF04445 Putative SAM-dependent methyltransferase THII_RS10130 PF00360 Phytochrome region THII_RS10130 PF01590 GAF domain THII_RS10130 PF00990 Diguanylate cyclase, GGDEF domain THII_RS10130 PF00563 EAL domain THII_RS10140 PF00588 SpoU rRNA Methylase family THII_RS10145 PF01464 Transglycosylase SLT domain THII_RS10150 PF13514 AAA domain THII_RS10165 PF00149 Calcineurin-like phosphoesterase THII_RS10195 PF03279 Bacterial lipid A biosynthesis acyltransferase THII_RS10205 PF00482 Type II secretion system (T2SS), protein F THII_RS10235 PF08334 Type II secretion system (T2SS), protein G THII_RS10235 PF07963 Prokaryotic N-terminal methylation motif THII_RS10245 PF13439 Glycosyltransferase Family 4 THII_RS10245 PF00534 Glycosyl transferases group 1 THII_RS10250 PF02705 K+ potassium transporter THII_RS10265 PF02951 Prokaryotic glutathione synthetase, N-terminal domain THII_RS10265 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain THII_RS10270 PF01571 Aminomethyltransferase folate-binding domain THII_RS10270 PF08669 Glycine cleavage T-protein C-terminal barrel domain THII_RS10275 PF01597 Glycine cleavage H-protein THII_RS10280 PF02347 Glycine cleavage system P-protein THII_RS10285 PF00072 Response regulator receiver domain THII_RS10290 PF10990 Protein of unknown function (DUF2809) THII_RS10310 PF01472 PUA domain THII_RS10310 PF00696 Amino acid kinase family THII_RS10320 PF01618 MotA/TolQ/ExbB proton channel family THII_RS10350 PF00596 Class II Aldolase and Adducin N-terminal domain THII_RS10360 PF01471 Putative peptidoglycan binding domain THII_RS10360 PF13401 AAA domain THII_RS10380 PF01546 Peptidase family M20/M25/M40 THII_RS10380 PF07687 Peptidase dimerisation domain THII_RS10385 PF00639 PPIC-type PPIASE domain THII_RS10390 PF01722 BolA-like protein THII_RS10395 PF03795 YCII-related domain THII_RS10400 PF04607 Region found in RelA / SpoT proteins THII_RS10400 PF13291 ACT domain THII_RS10400 PF02824 TGS domain THII_RS10405 PF04279 Intracellular septation protein A THII_RS10415 PF00005 ABC transporter THII_RS10420 PF02405 Permease MlaE THII_RS10430 PF02472 Biopolymer transport protein ExbD/TolR THII_RS10435 PF00572 Ribosomal protein L13 THII_RS10440 PF00380 Ribosomal protein S9/S16 THII_RS10445 PF00128 Alpha amylase, catalytic domain THII_RS10445 PF02806 Alpha amylase, C-terminal all-beta domain THII_RS10445 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THII_RS10460 PF00459 Inositol monophosphatase family THII_RS10465 PF01812 5-formyltetrahydrofolate cyclo-ligase family THII_RS10480 PF13193 AMP-binding enzyme C-terminal domain THII_RS10480 PF00501 AMP-binding enzyme THII_RS10480 PF01553 Acyltransferase THII_RS10495 PF05973 Phage derived protein Gp49-like (DUF891) THII_RS10500 PF01381 Helix-turn-helix THII_RS10520 PF03702 Anhydro-N-acetylmuramic acid kinase THII_RS10525 PF01494 FAD binding domain THII_RS10530 PF05685 Putative restriction endonuclease THII_RS10540 PF02254 TrkA-N domain THII_RS10540 PF00999 Sodium/hydrogen exchanger family THII_RS10555 PF00171 Aldehyde dehydrogenase family THII_RS10565 PF03275 UDP-galactopyranose mutase THII_RS10580 PF01553 Acyltransferase THII_RS10620 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase THII_RS10620 PF03033 Glycosyltransferase family 28 N-terminal domain THII_RS10665 PF04205 FMN-binding domain THII_RS10670 PF03116 NQR2, RnfD, RnfE family THII_RS10675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THII_RS10675 PF12838 4Fe-4S dicluster domain THII_RS10675 PF13375 RnfC Barrel sandwich hybrid domain THII_RS10675 PF10531 SLBB domain THII_RS10680 PF04060 Putative Fe-S cluster THII_RS10685 PF02508 Rnf-Nqr subunit, membrane protein THII_RS10690 PF03358 NADPH-dependent FMN reductase THII_RS10705 PF01627 Hpt domain THII_RS10705 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS10705 PF00512 His Kinase A (phospho-acceptor) domain THII_RS10705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS10705 PF00672 HAMP domain THII_RS10705 PF00072 Response regulator receiver domain THII_RS10710 PF01648 4'-phosphopantetheinyl transferase superfamily THII_RS10715 PF13667 ThiC-associated domain THII_RS10715 PF01964 Radical SAM ThiC family THII_RS10725 PF02321 Outer membrane efflux protein THII_RS10730 PF00082 Subtilase family THII_RS10730 PF01483 Proprotein convertase P-domain THII_RS10735 PF02203 Tar ligand binding domain homologue THII_RS10735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS10735 PF00672 HAMP domain THII_RS10740 PF01584 CheW-like domain THII_RS10745 PF02895 Signal transducing histidine kinase, homodimeric domain THII_RS10745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS10745 PF01627 Hpt domain THII_RS10745 PF01584 CheW-like domain THII_RS10750 PF00072 Response regulator receiver domain THII_RS10765 PF01026 TatD related DNase THII_RS10770 PF00294 pfkB family carbohydrate kinase THII_RS10780 PF03232 Ubiquinone biosynthesis protein COQ7 THII_RS10785 PF01479 S4 domain THII_RS10800 PF12729 Four helix bundle sensory module for signal transduction THII_RS10800 PF00672 HAMP domain THII_RS10800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS10830 PF00550 Phosphopantetheine attachment site THII_RS10860 PF13193 AMP-binding enzyme C-terminal domain THII_RS10860 PF00501 AMP-binding enzyme THII_RS10860 PF00668 Condensation domain THII_RS10860 PF16197 Ketoacyl-synthetase C-terminal extension THII_RS10860 PF00109 Beta-ketoacyl synthase, N-terminal domain THII_RS10860 PF02801 Beta-ketoacyl synthase, C-terminal domain THII_RS10860 PF00550 Phosphopantetheine attachment site THII_RS10860 PF14765 Polyketide synthase dehydratase THII_RS10860 PF08659 KR domain THII_RS10865 PF08659 KR domain THII_RS10865 PF00668 Condensation domain THII_RS10865 PF16197 Ketoacyl-synthetase C-terminal extension THII_RS10865 PF00109 Beta-ketoacyl synthase, N-terminal domain THII_RS10865 PF02801 Beta-ketoacyl synthase, C-terminal domain THII_RS10865 PF08659 KR domain THII_RS10865 PF00550 Phosphopantetheine attachment site THII_RS10865 PF14765 Polyketide synthase dehydratase THII_RS10865 PF00501 AMP-binding enzyme THII_RS10865 PF13193 AMP-binding enzyme C-terminal domain THII_RS10865 PF00668 Condensation domain THII_RS10865 PF16197 Ketoacyl-synthetase C-terminal extension THII_RS10865 PF00109 Beta-ketoacyl synthase, N-terminal domain THII_RS10865 PF00501 AMP-binding enzyme THII_RS10865 PF00550 Phosphopantetheine attachment site THII_RS10865 PF14765 Polyketide synthase dehydratase THII_RS10865 PF13193 AMP-binding enzyme C-terminal domain THII_RS10865 PF02801 Beta-ketoacyl synthase, C-terminal domain THII_RS10875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain THII_RS10875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain THII_RS10885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain THII_RS10885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain THII_RS10885 PF02770 Acyl-CoA dehydrogenase, middle domain THII_RS10895 PF02801 Beta-ketoacyl synthase, C-terminal domain THII_RS10895 PF08659 KR domain THII_RS10895 PF00550 Phosphopantetheine attachment site THII_RS10895 PF14765 Polyketide synthase dehydratase THII_RS10895 PF00109 Beta-ketoacyl synthase, N-terminal domain THII_RS10895 PF16197 Ketoacyl-synthetase C-terminal extension THII_RS10900 PF08659 KR domain THII_RS10900 PF00668 Condensation domain THII_RS10900 PF16197 Ketoacyl-synthetase C-terminal extension THII_RS10900 PF00109 Beta-ketoacyl synthase, N-terminal domain THII_RS10900 PF02801 Beta-ketoacyl synthase, C-terminal domain THII_RS10900 PF00550 Phosphopantetheine attachment site THII_RS10900 PF14765 Polyketide synthase dehydratase THII_RS10900 PF13193 AMP-binding enzyme C-terminal domain THII_RS10900 PF00501 AMP-binding enzyme THII_RS10910 PF13808 DDE_Tnp_1-associated THII_RS10910 PF01609 Transposase DDE domain THII_RS10930 PF00698 Acyl transferase domain THII_RS10940 PF00109 Beta-ketoacyl synthase, N-terminal domain THII_RS10940 PF02801 Beta-ketoacyl synthase, C-terminal domain THII_RS10945 PF13808 DDE_Tnp_1-associated THII_RS10945 PF01609 Transposase DDE domain THII_RS10955 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal THII_RS10955 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal THII_RS10960 PF00378 Enoyl-CoA hydratase/isomerase THII_RS11045 PF00391 PEP-utilising enzyme, mobile domain THII_RS11045 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain THII_RS11075 PF00403 Heavy-metal-associated domain THII_RS11105 PF13358 DDE superfamily endonuclease THII_RS11150 PF01926 50S ribosome-binding GTPase THII_RS11150 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal THII_RS11165 PF03958 Bacterial type II/III secretion system short domain THII_RS11165 PF00263 Bacterial type II and III secretion system protein THII_RS11170 PF00482 Type II secretion system (T2SS), protein F THII_RS11175 PF00437 Type II/IV secretion system protein THII_RS11175 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain THII_RS11185 PF08264 Anticodon-binding domain of tRNA THII_RS11185 PF00133 tRNA synthetases class I (I, L, M and V) THII_RS11185 PF10458 Valyl tRNA synthetase tRNA binding arm THII_RS11235 PF13660 Domain of unknown function (DUF4147) THII_RS11235 PF05161 MOFRL family THII_RS11245 PF01593 Flavin containing amine oxidoreductase THII_RS11250 PF01593 Flavin containing amine oxidoreductase THII_RS11255 PF13183 4Fe-4S dicluster domain THII_RS11255 PF13085 2Fe-2S iron-sulfur cluster binding domain THII_RS11260 PF02754 Cysteine-rich domain THII_RS11285 PF00011 Hsp20/alpha crystallin family THII_RS11290 PF01556 DnaJ C terminal domain THII_RS11290 PF00226 DnaJ domain THII_RS11295 PF00149 Calcineurin-like phosphoesterase THII_RS11300 PF08335 GlnD PII-uridylyltransferase THII_RS11300 PF03710 Glutamate-ammonia ligase adenylyltransferase THII_RS11310 PF01063 Amino-transferase class IV THII_RS11315 PF00425 chorismate binding enzyme THII_RS11330 PF01339 CheB methylesterase THII_RS11335 PF03705 CheR methyltransferase, all-alpha domain THII_RS11335 PF01739 CheR methyltransferase, SAM binding domain THII_RS11350 PF00534 Glycosyl transferases group 1 THII_RS11350 PF13439 Glycosyltransferase Family 4 THII_RS11355 PF00535 Glycosyl transferase family 2 THII_RS11365 PF13537 Glutamine amidotransferase domain THII_RS11365 PF00733 Asparagine synthase THII_RS11375 PF01926 50S ribosome-binding GTPase THII_RS11375 PF06071 Protein of unknown function (DUF933) THII_RS11380 PF01195 Peptidyl-tRNA hydrolase THII_RS11385 PF14693 Ribosomal protein TL5, C-terminal domain THII_RS11385 PF01386 Ribosomal L25p family THII_RS11390 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase THII_RS11390 PF14572 Phosphoribosyl synthetase-associated domain THII_RS11400 PF00288 GHMP kinases N terminal domain THII_RS11400 PF08544 GHMP kinases C terminal THII_RS11405 PF03550 Outer membrane lipoprotein LolB THII_RS11415 PF00578 AhpC/TSA family THII_RS11420 PF02562 PhoH-like protein THII_RS11420 PF13638 PIN domain THII_RS11425 PF00571 CBS domain THII_RS11425 PF00478 IMP dehydrogenase / GMP reductase domain THII_RS11430 PF00092 von Willebrand factor type A domain THII_RS11435 PF04055 Radical SAM superfamily THII_RS11470 PF01555 DNA methylase THII_RS11480 PF00512 His Kinase A (phospho-acceptor) domain THII_RS11480 PF09308 LuxQ, periplasmic THII_RS11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS11480 PF00072 Response regulator receiver domain THII_RS11485 PF01066 CDP-alcohol phosphatidyltransferase THII_RS11490 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain THII_RS11490 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain THII_RS11510 PF10369 Small subunit of acetolactate synthase THII_RS11515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THII_RS11515 PF00205 Thiamine pyrophosphate enzyme, central domain THII_RS11515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THII_RS11520 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase THII_RS11520 PF13746 4Fe-4S dicluster domain THII_RS11520 PF12801 4Fe-4S binding domain THII_RS11550 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain THII_RS11550 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family THII_RS11550 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain THII_RS11555 PF00581 Rhodanese-like domain THII_RS11560 PF00301 Rubredoxin THII_RS11565 PF08543 Phosphomethylpyrimidine kinase THII_RS11565 PF10120 Thiamine-phosphate synthase THII_RS11570 PF02581 Thiamine monophosphate synthase THII_RS11575 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase THII_RS11585 PF00158 Sigma-54 interaction domain THII_RS11585 PF02954 Bacterial regulatory protein, Fis family THII_RS11585 PF00072 Response regulator receiver domain THII_RS11600 PF01743 Poly A polymerase head domain THII_RS11600 PF00571 CBS domain THII_RS11605 PF01894 Uncharacterised protein family UPF0047 THII_RS11620 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain THII_RS11620 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain THII_RS11625 PF00211 Adenylate and Guanylate cyclase catalytic domain THII_RS11625 PF00072 Response regulator receiver domain THII_RS11635 PF01545 Cation efflux family THII_RS11635 PF16916 Dimerisation domain of Zinc Transporter THII_RS11650 PF00578 AhpC/TSA family THII_RS11655 PF01926 50S ribosome-binding GTPase THII_RS11660 PF17871 AAA lid domain THII_RS11660 PF00004 ATPase family associated with various cellular activities (AAA) THII_RS11660 PF10431 C-terminal, D2-small domain, of ClpB protein THII_RS11660 PF02861 Clp amino terminal domain, pathogenicity island component THII_RS11660 PF07724 AAA domain (Cdc48 subfamily) THII_RS11665 PF02617 ATP-dependent Clp protease adaptor protein ClpS THII_RS11680 PF04542 Sigma-70 region 2 THII_RS11680 PF04545 Sigma-70, region 4 THII_RS11680 PF00140 Sigma-70 factor, region 1.2 THII_RS11685 PF01636 Phosphotransferase enzyme family THII_RS11690 PF00483 Nucleotidyl transferase THII_RS11695 PF00453 Ribosomal protein L20 THII_RS11700 PF01632 Ribosomal protein L35 THII_RS11705 PF05198 Translation initiation factor IF-3, N-terminal domain THII_RS11705 PF00707 Translation initiation factor IF-3, C-terminal domain THII_RS11710 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THII_RS11710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THII_RS11710 PF02824 TGS domain THII_RS11710 PF03129 Anticodon binding domain THII_RS11735 PF01627 Hpt domain THII_RS11735 PF00672 HAMP domain THII_RS11735 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS11735 PF00072 Response regulator receiver domain THII_RS11735 PF00512 His Kinase A (phospho-acceptor) domain THII_RS11735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS11750 PF13545 Crp-like helix-turn-helix domain THII_RS11750 PF00027 Cyclic nucleotide-binding domain THII_RS11765 PF00850 Histone deacetylase domain THII_RS11770 PF05685 Putative restriction endonuclease THII_RS11810 PF17209 Hfq protein THII_RS11815 PF13167 GTP-binding GTPase N-terminal THII_RS11815 PF01926 50S ribosome-binding GTPase THII_RS11815 PF16360 GTP-binding GTPase Middle Region THII_RS11820 PF12221 Bacterial membrane protein N terminal THII_RS11820 PF01145 SPFH domain / Band 7 family THII_RS11825 PF01145 SPFH domain / Band 7 family THII_RS11830 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) THII_RS11835 PF13393 Histidyl-tRNA synthetase THII_RS11840 PF00709 Adenylosuccinate synthetase THII_RS11845 PF17954 Quercetinase C-terminal cupin domain THII_RS11845 PF02678 Pirin THII_RS11875 PF00082 Subtilase family THII_RS11890 PF00486 Transcriptional regulatory protein, C terminal THII_RS11890 PF00072 Response regulator receiver domain THII_RS11895 PF00512 His Kinase A (phospho-acceptor) domain THII_RS11895 PF00672 HAMP domain THII_RS11895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS11925 PF02508 Rnf-Nqr subunit, membrane protein THII_RS11935 PF00633 Helix-hairpin-helix motif THII_RS11935 PF00730 HhH-GPD superfamily base excision DNA repair protein THII_RS11935 PF10576 Iron-sulfur binding domain of endonuclease III THII_RS11940 PF02527 rRNA small subunit methyltransferase G THII_RS11960 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system THII_RS11980 PF07728 AAA domain (dynein-related subfamily) THII_RS11980 PF08406 CbbQ/NirQ/NorQ C-terminal THII_RS11985 PF00920 Dehydratase family THII_RS12000 PF17782 DprA winged helix domain THII_RS12000 PF02481 DNA recombination-mediator protein A THII_RS12005 PF04361 Protein of unknown function (DUF494) THII_RS12010 PF01751 Toprim domain THII_RS12010 PF13368 Topoisomerase C-terminal repeat THII_RS12010 PF01131 DNA topoisomerase THII_RS12015 PF01300 Telomere recombination THII_RS12020 PF00543 Nitrogen regulatory protein P-II THII_RS12025 PF00909 Ammonium Transporter Family THII_RS12030 PF00691 OmpA family THII_RS12050 PF00226 DnaJ domain THII_RS12050 PF01556 DnaJ C terminal domain THII_RS12050 PF00684 DnaJ central domain THII_RS12065 PF00072 Response regulator receiver domain THII_RS12065 PF01339 CheB methylesterase THII_RS12070 PF03975 CheD chemotactic sensory transduction THII_RS12075 PF03705 CheR methyltransferase, all-alpha domain THII_RS12075 PF01739 CheR methyltransferase, SAM binding domain THII_RS12085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS12085 PF02203 Tar ligand binding domain homologue THII_RS12085 PF00672 HAMP domain THII_RS12100 PF02589 LUD domain THII_RS12105 PF11870 Domain of unknown function (DUF3390) THII_RS12105 PF13183 4Fe-4S dicluster domain THII_RS12105 PF02589 LUD domain THII_RS12145 PF07963 Prokaryotic N-terminal methylation motif THII_RS12145 PF00114 Pilin (bacterial filament) THII_RS12150 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal THII_RS12150 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THII_RS12165 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THII_RS12165 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal THII_RS12170 PF02333 Phytase THII_RS12175 PF02405 Permease MlaE THII_RS12180 PF06725 3D domain THII_RS12180 PF01476 LysM domain THII_RS12240 PF03741 Integral membrane protein TerC family THII_RS12250 PF00291 Pyridoxal-phosphate dependent enzyme THII_RS12255 PF02501 Type II secretion system (T2SS), protein I THII_RS12255 PF07963 Prokaryotic N-terminal methylation motif THII_RS12295 PF00106 short chain dehydrogenase THII_RS12300 PF02910 Fumarate reductase flavoprotein C-term THII_RS12300 PF00890 FAD binding domain THII_RS12310 PF13180 PDZ domain THII_RS12320 PF06421 GTP-binding protein LepA C-terminus THII_RS12320 PF00679 Elongation factor G C-terminus THII_RS12320 PF00009 Elongation factor Tu GTP binding domain THII_RS12325 PF10502 Signal peptidase, peptidase S26 THII_RS12335 PF14622 Ribonuclease-III-like THII_RS12335 PF00035 Double-stranded RNA binding motif THII_RS12340 PF01926 50S ribosome-binding GTPase THII_RS12340 PF07650 KH domain THII_RS12370 PF00561 alpha/beta hydrolase fold THII_RS12390 PF01370 NAD dependent epimerase/dehydratase family THII_RS12395 PF02754 Cysteine-rich domain THII_RS12425 PF02463 RecF/RecN/SMC N terminal domain THII_RS12455 PF00437 Type II/IV secretion system protein THII_RS12470 PF03658 RnfH family Ubiquitin THII_RS12475 PF02508 Rnf-Nqr subunit, membrane protein THII_RS12495 PF03006 Haemolysin-III related THII_RS12505 PF07726 ATPase family associated with various cellular activities (AAA) THII_RS12505 PF17863 AAA lid domain THII_RS12515 PF08245 Mur ligase middle domain THII_RS12515 PF02875 Mur ligase family, glutamate ligase domain THII_RS12520 PF03033 Glycosyltransferase family 28 N-terminal domain THII_RS12520 PF04101 Glycosyltransferase family 28 C-terminal domain THII_RS12525 PF02875 Mur ligase family, glutamate ligase domain THII_RS12525 PF08245 Mur ligase middle domain THII_RS12525 PF01225 Mur ligase family, catalytic domain THII_RS12530 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain THII_RS12530 PF01565 FAD binding domain THII_RS12535 PF01820 D-ala D-ala ligase N-terminus THII_RS12535 PF07478 D-ala D-ala ligase C-terminus THII_RS12540 PF03799 Cell division protein FtsQ THII_RS12540 PF08478 POTRA domain, FtsQ-type THII_RS12545 PF02491 SHS2 domain inserted in FTSA THII_RS12550 PF00091 Tubulin/FtsZ family, GTPase domain THII_RS12550 PF12327 FtsZ family, C-terminal domain THII_RS12555 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase THII_RS12585 PF00132 Bacterial transferase hexapeptide (six repeats) THII_RS12590 PF00691 OmpA family THII_RS12590 PF05736 OprF membrane domain THII_RS12605 PF06629 MltA-interacting protein MipA THII_RS12620 PF02592 Putative vitamin uptake transporter THII_RS12625 PF02673 Bacitracin resistance protein BacA THII_RS12635 PF07969 Amidohydrolase family THII_RS12640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS12640 PF00989 PAS fold THII_RS12645 PF13185 GAF domain THII_RS12645 PF02954 Bacterial regulatory protein, Fis family THII_RS12645 PF00158 Sigma-54 interaction domain THII_RS12680 PF03658 RnfH family Ubiquitin THII_RS12685 PF02508 Rnf-Nqr subunit, membrane protein THII_RS12690 PF04205 FMN-binding domain THII_RS12695 PF03116 NQR2, RnfD, RnfE family THII_RS12700 PF10531 SLBB domain THII_RS12700 PF13375 RnfC Barrel sandwich hybrid domain THII_RS12700 PF13237 4Fe-4S dicluster domain THII_RS12700 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THII_RS12705 PF04060 Putative Fe-S cluster THII_RS12710 PF02508 Rnf-Nqr subunit, membrane protein THII_RS12715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS12715 PF00989 PAS fold THII_RS12720 PF00158 Sigma-54 interaction domain THII_RS12720 PF13185 GAF domain THII_RS12720 PF02954 Bacterial regulatory protein, Fis family THII_RS12730 PF01850 PIN domain THII_RS12750 PF01029 NusB family THII_RS12750 PF01189 16S rRNA methyltransferase RsmB/F THII_RS12760 PF00672 HAMP domain THII_RS12760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS12760 PF00989 PAS fold THII_RS12760 PF00512 His Kinase A (phospho-acceptor) domain THII_RS12765 PF00158 Sigma-54 interaction domain THII_RS12765 PF00072 Response regulator receiver domain THII_RS12765 PF02954 Bacterial regulatory protein, Fis family THII_RS12770 PF00072 Response regulator receiver domain THII_RS12770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS12770 PF00672 HAMP domain THII_RS12770 PF00512 His Kinase A (phospho-acceptor) domain THII_RS12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS12770 PF01627 Hpt domain THII_RS12780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase THII_RS12780 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase THII_RS12800 PF01381 Helix-turn-helix THII_RS12805 PF00521 DNA gyrase/topoisomerase IV, subunit A THII_RS12805 PF03989 DNA gyrase C-terminal domain, beta-propeller THII_RS12840 PF02347 Glycine cleavage system P-protein THII_RS12845 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit THII_RS12850 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus THII_RS12850 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus THII_RS12855 PF02556 Preprotein translocase subunit SecB THII_RS12860 PF00581 Rhodanese-like domain THII_RS12885 PF00528 Binding-protein-dependent transport system inner membrane component THII_RS12890 PF00528 Binding-protein-dependent transport system inner membrane component THII_RS12895 PF00005 ABC transporter THII_RS12895 PF12857 TOBE-like domain THII_RS12895 PF17850 CysA C-terminal regulatory domain THII_RS12900 PF04754 Putative transposase, YhgA-like THII_RS12910 PF08676 MutL C terminal dimerisation domain THII_RS12910 PF01119 DNA mismatch repair protein, C-terminal domain THII_RS12915 PF01464 Transglycosylase SLT domain THII_RS12915 PF00497 Bacterial extracellular solute-binding proteins, family 3 THII_RS12920 PF05191 Adenylate kinase, active site lid THII_RS12930 PF04717 Type VI secretion system, phage-baseplate injector THII_RS12950 PF13358 DDE superfamily endonuclease THII_RS12965 PF00391 PEP-utilising enzyme, mobile domain THII_RS12965 PF02896 PEP-utilising enzyme, TIM barrel domain THII_RS12965 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain THII_RS12995 PF04384 Iron-sulphur cluster assembly THII_RS13000 PF00111 2Fe-2S iron-sulfur cluster binding domain THII_RS13005 PF00012 Hsp70 protein THII_RS13010 PF07743 HSCB C-terminal oligomerisation domain THII_RS13015 PF01521 Iron-sulphur cluster biosynthesis THII_RS13030 PF01592 NifU-like N terminal domain THII_RS13035 PF00266 Aminotransferase class-V THII_RS13040 PF02082 Transcriptional regulator THII_RS13055 PF00534 Glycosyl transferases group 1 THII_RS13055 PF13439 Glycosyltransferase Family 4 THII_RS13060 PF08323 Starch synthase catalytic domain THII_RS13060 PF00534 Glycosyl transferases group 1 THII_RS13080 PF00501 AMP-binding enzyme THII_RS13085 PF05257 CHAP domain THII_RS13085 PF01476 LysM domain THII_RS13090 PF05257 CHAP domain THII_RS13090 PF01476 LysM domain THII_RS13100 PF00149 Calcineurin-like phosphoesterase THII_RS13100 PF02872 5'-nucleotidase, C-terminal domain THII_RS13105 PF01545 Cation efflux family THII_RS13110 PF09335 SNARE associated Golgi protein THII_RS13165 PF01850 PIN domain THII_RS13170 PF05190 MutS family domain IV THII_RS13170 PF05192 MutS domain III THII_RS13170 PF00488 MutS domain V THII_RS13170 PF05188 MutS domain II THII_RS13170 PF01624 MutS domain I THII_RS13175 PF00561 alpha/beta hydrolase fold THII_RS13185 PF13358 DDE superfamily endonuclease THII_RS13205 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain THII_RS13205 PF01137 RNA 3'-terminal phosphate cyclase THII_RS13230 PF02036 SCP-2 sterol transfer family THII_RS13235 PF01136 Peptidase family U32 THII_RS13240 PF01136 Peptidase family U32 THII_RS13245 PF04055 Radical SAM superfamily THII_RS13245 PF16199 Radical_SAM C-terminal domain THII_RS13250 PF09828 Chromate resistance exported protein THII_RS13260 PF09828 Chromate resistance exported protein THII_RS13305 PF01872 RibD C-terminal domain THII_RS13310 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) THII_RS13320 PF01209 ubiE/COQ5 methyltransferase family THII_RS13325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THII_RS13330 PF00990 Diguanylate cyclase, GGDEF domain THII_RS13330 PF17158 Membrane-associated sensor, integral membrane domain THII_RS13335 PF00586 AIR synthase related protein, N-terminal domain THII_RS13335 PF02769 AIR synthase related protein, C-terminal domain THII_RS13345 PF01027 Inhibitor of apoptosis-promoting Bax1 THII_RS13350 PF16326 ABC transporter C-terminal domain THII_RS13350 PF00005 ABC transporter THII_RS13350 PF12848 ABC transporter THII_RS13355 PF05685 Putative restriction endonuclease THII_RS13360 PF00072 Response regulator receiver domain THII_RS13365 PF08334 Type II secretion system (T2SS), protein G THII_RS13365 PF07963 Prokaryotic N-terminal methylation motif THII_RS13405 PF13614 AAA domain THII_RS13410 PF01555 DNA methylase THII_RS13415 PF01556 DnaJ C terminal domain THII_RS13415 PF00226 DnaJ domain THII_RS13415 PF00684 DnaJ central domain THII_RS13420 PF00012 Hsp70 protein THII_RS13425 PF01025 GrpE THII_RS13430 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding THII_RS13430 PF01628 HrcA protein C terminal domain THII_RS13435 PF01513 ATP-NAD kinase THII_RS13440 PF04356 Protein of unknown function (DUF489) THII_RS13450 PF05134 Type II secretion system (T2SS), protein L THII_RS13450 PF12693 GspL periplasmic domain THII_RS13455 PF00293 NUDIX domain THII_RS13475 PF00994 Probable molybdopterin binding domain THII_RS13475 PF03453 MoeA N-terminal region (domain I and II) THII_RS13475 PF03454 MoeA C-terminal region (domain IV) THII_RS13480 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain THII_RS13480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase THII_RS13510 PF03143 Elongation factor Tu C-terminal domain THII_RS13510 PF00009 Elongation factor Tu GTP binding domain THII_RS13510 PF03144 Elongation factor Tu domain 2 THII_RS13520 PF00584 SecE/Sec61-gamma subunits of protein translocation complex THII_RS13525 PF02357 Transcription termination factor nusG THII_RS13525 PF00467 KOW motif THII_RS13530 PF03946 Ribosomal protein L11, N-terminal domain THII_RS13530 PF00298 Ribosomal protein L11, RNA binding domain THII_RS13535 PF00687 Ribosomal protein L1p/L10e family THII_RS13540 PF00466 Ribosomal protein L10 THII_RS13545 PF00542 Ribosomal protein L7/L12 C-terminal domain THII_RS13545 PF16320 Ribosomal protein L7/L12 dimerisation domain THII_RS13550 PF04565 RNA polymerase Rpb2, domain 3 THII_RS13550 PF04561 RNA polymerase Rpb2, domain 2 THII_RS13550 PF04560 RNA polymerase Rpb2, domain 7 THII_RS13550 PF10385 RNA polymerase beta subunit external 1 domain THII_RS13550 PF00562 RNA polymerase Rpb2, domain 6 THII_RS13550 PF04563 RNA polymerase beta subunit THII_RS13555 PF04997 RNA polymerase Rpb1, domain 1 THII_RS13555 PF05000 RNA polymerase Rpb1, domain 4 THII_RS13555 PF04983 RNA polymerase Rpb1, domain 3 THII_RS13555 PF04998 RNA polymerase Rpb1, domain 5 THII_RS13555 PF00623 RNA polymerase Rpb1, domain 2 THII_RS13570 PF00005 ABC transporter THII_RS13585 PF00005 ABC transporter THII_RS13620 PF02559 CarD-like/TRCF domain THII_RS13620 PF17757 UvrB interaction domain THII_RS13620 PF03461 TRCF domain THII_RS13620 PF00271 Helicase conserved C-terminal domain THII_RS13620 PF00270 DEAD/DEAH box helicase THII_RS13625 PF02091 Glycyl-tRNA synthetase alpha subunit THII_RS13630 PF02092 Glycyl-tRNA synthetase beta subunit THII_RS13630 PF05746 DALR anticodon binding domain THII_RS13640 PF00692 dUTPase THII_RS13645 PF00072 Response regulator receiver domain THII_RS13645 PF02954 Bacterial regulatory protein, Fis family THII_RS13645 PF00158 Sigma-54 interaction domain THII_RS13650 PF00512 His Kinase A (phospho-acceptor) domain THII_RS13650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS13660 PF01029 NusB family THII_RS13665 PF00885 6,7-dimethyl-8-ribityllumazine synthase THII_RS13670 PF00925 GTP cyclohydrolase II THII_RS13670 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase THII_RS13685 PF05222 Alanine dehydrogenase/PNT, N-terminal domain THII_RS13685 PF01262 Alanine dehydrogenase/PNT, C-terminal domain THII_RS13690 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch THII_RS13695 PF02233 NAD(P) transhydrogenase beta subunit THII_RS13700 PF00313 'Cold-shock' DNA-binding domain THII_RS13705 PF02913 FAD linked oxidases, C-terminal domain THII_RS13705 PF01565 FAD binding domain THII_RS13740 PF13340 Putative transposase of IS4/5 family (DUF4096) THII_RS13745 PF00005 ABC transporter THII_RS13745 PF00664 ABC transporter transmembrane region THII_RS13755 PF05128 Domain of unknown function (DUF697) THII_RS13785 PF00884 Sulfatase THII_RS13790 PF16347 Domain of unknown function (DUF4976) THII_RS13790 PF00884 Sulfatase THII_RS13795 PF00550 Phosphopantetheine attachment site THII_RS13795 PF07993 Male sterility protein THII_RS13800 PF00975 Thioesterase domain THII_RS13800 PF00550 Phosphopantetheine attachment site THII_RS13800 PF00391 PEP-utilising enzyme, mobile domain THII_RS13800 PF00668 Condensation domain THII_RS13800 PF13193 AMP-binding enzyme C-terminal domain THII_RS13800 PF00501 AMP-binding enzyme THII_RS13800 PF08241 Methyltransferase domain THII_RS13820 PF00107 Zinc-binding dehydrogenase THII_RS13820 PF08240 Alcohol dehydrogenase GroES-like domain THII_RS13850 PF00550 Phosphopantetheine attachment site THII_RS13860 PF00550 Phosphopantetheine attachment site THII_RS13860 PF13193 AMP-binding enzyme C-terminal domain THII_RS13860 PF00501 AMP-binding enzyme THII_RS13860 PF00668 Condensation domain THII_RS13865 PF01947 p-hydroxybenzoic acid synthase THII_RS13875 PF02543 Carbamoyltransferase N-terminus THII_RS13875 PF16861 Carbamoyltransferase C-terminus THII_RS13880 PF06969 HemN C-terminal domain THII_RS13880 PF04055 Radical SAM superfamily THII_RS13890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THII_RS13890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THII_RS13890 PF11890 Domain of unknown function (DUF3410) THII_RS13900 PF01494 FAD binding domain THII_RS13905 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain THII_RS13905 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain THII_RS13905 PF06827 Zinc finger found in FPG and IleRS THII_RS13925 PF02580 D-Tyr-tRNA(Tyr) deacylase THII_RS13930 PF01668 SmpB protein THII_RS13935 PF03364 Polyketide cyclase / dehydrase and lipid transport THII_RS13940 PF03658 RnfH family Ubiquitin THII_RS13945 PF04355 SmpA / OmlA family THII_RS13950 PF01475 Ferric uptake regulator family THII_RS14000 PF00075 RNase H THII_RS14005 PF08241 Methyltransferase domain THII_RS14010 PF02575 YbaB/EbfC DNA-binding family THII_RS14015 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding THII_RS14015 PF12170 DNA polymerase III tau subunit V interacting with alpha THII_RS14015 PF12169 DNA polymerase III subunits gamma and tau domain III THII_RS14050 PF07690 Major Facilitator Superfamily THII_RS14060 PF00196 Bacterial regulatory proteins, luxR family THII_RS14060 PF00072 Response regulator receiver domain THII_RS14070 PF03462 PCRF domain THII_RS14070 PF00472 RF-1 domain THII_RS14075 PF01488 Shikimate / quinate 5-dehydrogenase THII_RS14075 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain THII_RS14075 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain THII_RS14085 PF07963 Prokaryotic N-terminal methylation motif THII_RS14085 PF08334 Type II secretion system (T2SS), protein G THII_RS14090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THII_RS14090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THII_RS14090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THII_RS14090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THII_RS14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THII_RS14105 PF03466 LysR substrate binding domain THII_RS14115 PF01594 AI-2E family transporter THII_RS14120 PF05154 TM2 domain THII_RS14160 PF00871 Acetokinase family THII_RS14240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III THII_RS14255 PF17805 AsnC-like ligand binding domain THII_RS14255 PF13404 AsnC-type helix-turn-helix domain THII_RS14260 PF17805 AsnC-like ligand binding domain THII_RS14265 PF17805 AsnC-like ligand binding domain THII_RS14270 PF17805 AsnC-like ligand binding domain THII_RS14275 PF13186 Iron-sulfur cluster-binding domain THII_RS14275 PF04055 Radical SAM superfamily THII_RS14285 PF00116 Cytochrome C oxidase subunit II, periplasmic domain THII_RS14285 PF18793 Nitrous oxide reductase propeller repeat 2 THII_RS14285 PF18764 Nitrous oxide reductase propeller repeat THII_RS14290 PF00034 Cytochrome c THII_RS14310 PF12838 4Fe-4S dicluster domain THII_RS14320 PF00005 ABC transporter THII_RS14385 PF02896 PEP-utilising enzyme, TIM barrel domain THII_RS14385 PF05524 PEP-utilising enzyme, N-terminal THII_RS14385 PF00391 PEP-utilising enzyme, mobile domain THII_RS14390 PF00381 PTS HPr component phosphorylation site THII_RS14400 PF03668 P-loop ATPase protein family THII_RS14405 PF05221 S-adenosyl-L-homocysteine hydrolase THII_RS14405 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain THII_RS14410 PF00438 S-adenosylmethionine synthetase, N-terminal domain THII_RS14410 PF02772 S-adenosylmethionine synthetase, central domain THII_RS14410 PF02773 S-adenosylmethionine synthetase, C-terminal domain THII_RS14415 PF06418 CTP synthase N-terminus THII_RS14415 PF00117 Glutamine amidotransferase class-I THII_RS14420 PF00140 Sigma-70 factor, region 1.2 THII_RS14420 PF04545 Sigma-70, region 4 THII_RS14420 PF04539 Sigma-70 region 3 THII_RS14420 PF04542 Sigma-70 region 2 THII_RS14425 PF00829 Ribosomal prokaryotic L21 protein THII_RS14430 PF01016 Ribosomal L27 protein THII_RS14435 PF01018 GTP1/OBG THII_RS14435 PF01926 50S ribosome-binding GTPase THII_RS14455 PF02195 ParB-like nuclease domain THII_RS14470 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ THII_RS14500 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain THII_RS14500 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain THII_RS14505 PF02874 ATP synthase alpha/beta family, beta-barrel domain THII_RS14505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THII_RS14510 PF00231 ATP synthase THII_RS14520 PF00677 Lumazine binding domain THII_RS14525 PF00306 ATP synthase alpha/beta chain, C terminal domain THII_RS14525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THII_RS14525 PF02874 ATP synthase alpha/beta family, beta-barrel domain THII_RS14530 PF00213 ATP synthase delta (OSCP) subunit THII_RS14535 PF00430 ATP synthase B/B' CF(0) THII_RS14540 PF00137 ATP synthase subunit C THII_RS14545 PF00119 ATP synthase A chain THII_RS14570 PF00361 Proton-conducting membrane transporter THII_RS14575 PF00361 Proton-conducting membrane transporter THII_RS14575 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus THII_RS14580 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THII_RS14580 PF00361 Proton-conducting membrane transporter THII_RS14585 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L THII_RS14590 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 THII_RS14605 PF12838 4Fe-4S dicluster domain THII_RS14610 PF00146 NADH dehydrogenase THII_RS14615 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal THII_RS14615 PF00384 Molybdopterin oxidoreductase THII_RS14615 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THII_RS14640 PF00290 Tryptophan synthase alpha chain THII_RS14645 PF00291 Pyridoxal-phosphate dependent enzyme THII_RS14670 PF03372 Endonuclease/Exonuclease/phosphatase family THII_RS14675 PF13089 Polyphosphate kinase N-terminal domain THII_RS14675 PF17941 Polyphosphate kinase C-terminal domain 1 THII_RS14675 PF02503 Polyphosphate kinase middle domain THII_RS14675 PF13090 Polyphosphate kinase C-terminal domain 2 THII_RS14695 PF09190 DALR domain THII_RS14695 PF01406 tRNA synthetases class I (C) catalytic domain THII_RS14700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS14700 PF00512 His Kinase A (phospho-acceptor) domain THII_RS14705 PF02492 CobW/HypB/UreG, nucleotide-binding domain THII_RS14720 PF00072 Response regulator receiver domain THII_RS14730 PF00437 Type II/IV secretion system protein THII_RS14740 PF00534 Glycosyl transferases group 1 THII_RS14745 PF01168 Alanine racemase, N-terminal domain THII_RS14750 PF00072 Response regulator receiver domain THII_RS14750 PF00158 Sigma-54 interaction domain THII_RS14755 PF01649 Ribosomal protein S20 THII_RS14770 PF01797 Transposase IS200 like THII_RS14775 PF13847 Methyltransferase domain THII_RS14775 PF10119 Predicted methyltransferase regulatory domain THII_RS14780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THII_RS14780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THII_RS14840 PF00750 tRNA synthetases class I (R) THII_RS14840 PF05746 DALR anticodon binding domain THII_RS14840 PF03485 Arginyl tRNA synthetase N terminal domain THII_RS14845 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system THII_RS14875 PF00009 Elongation factor Tu GTP binding domain THII_RS14875 PF00679 Elongation factor G C-terminus THII_RS14875 PF03144 Elongation factor Tu domain 2 THII_RS14875 PF14492 Elongation Factor G, domain II THII_RS14875 PF03764 Elongation factor G, domain IV THII_RS14885 PF02811 PHP domain THII_RS14885 PF07733 Bacterial DNA polymerase III alpha NTPase domain THII_RS14885 PF01336 OB-fold nucleic acid binding domain THII_RS14885 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THII_RS14885 PF14579 Helix-hairpin-helix motif THII_RS14945 PF02463 RecF/RecN/SMC N terminal domain THII_RS14955 PF01565 FAD binding domain THII_RS14955 PF04030 D-arabinono-1,4-lactone oxidase THII_RS14960 PF02769 AIR synthase related protein, C-terminal domain THII_RS14960 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain THII_RS14960 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal THII_RS14970 PF01979 Amidohydrolase family THII_RS14975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family THII_RS15000 PF03459 TOBE domain THII_RS15000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THII_RS15030 PF11808 Phosphate regulon sensor protein PhoR THII_RS15030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS15030 PF00512 His Kinase A (phospho-acceptor) domain THII_RS15030 PF00989 PAS fold THII_RS15035 PF00486 Transcriptional regulatory protein, C terminal THII_RS15035 PF00072 Response regulator receiver domain THII_RS15040 PF00294 pfkB family carbohydrate kinase THII_RS15045 PF00069 Protein kinase domain THII_RS15060 PF03548 Outer membrane lipoprotein carrier protein LolA THII_RS15075 PF00360 Phytochrome region THII_RS15075 PF00990 Diguanylate cyclase, GGDEF domain THII_RS15075 PF01590 GAF domain THII_RS15075 PF00563 EAL domain THII_RS15085 PF11924 Inverse autotransporter, beta-domain THII_RS15085 PF09134 Invasin, domain 3 THII_RS15085 PF02369 Bacterial Ig-like domain (group 1) THII_RS15110 PF06144 DNA polymerase III, delta subunit THII_RS15110 PF14840 Processivity clamp loader gamma complex DNA pol III C-term THII_RS15120 PF17284 Spermidine synthase tetramerisation domain THII_RS15125 PF01040 UbiA prenyltransferase family THII_RS15150 PF01050 Mannose-6-phosphate isomerase THII_RS15150 PF00483 Nucleotidyl transferase THII_RS15155 PF07992 Pyridine nucleotide-disulphide oxidoreductase THII_RS15155 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THII_RS15160 PF00266 Aminotransferase class-V THII_RS15165 PF01842 ACT domain THII_RS15165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THII_RS15165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THII_RS15175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS15175 PF00512 His Kinase A (phospho-acceptor) domain THII_RS15175 PF08521 Two-component sensor kinase N-terminal THII_RS15180 PF00072 Response regulator receiver domain THII_RS15180 PF00486 Transcriptional regulatory protein, C terminal THII_RS15205 PF12631 MnmE helical domain THII_RS15205 PF10396 GTP-binding protein TrmE N-terminus THII_RS15205 PF01926 50S ribosome-binding GTPase THII_RS15225 PF17946 RecC C-terminal domain THII_RS15235 PF00448 SRP54-type protein, GTPase domain THII_RS15235 PF02978 Signal peptide binding domain THII_RS15235 PF02881 SRP54-type protein, helical bundle domain THII_RS15240 PF00005 ABC transporter THII_RS15240 PF12848 ABC transporter THII_RS15265 PF02540 NAD synthase THII_RS15265 PF00795 Carbon-nitrogen hydrolase THII_RS15270 PF05690 Thiazole biosynthesis protein ThiG THII_RS15290 PF04319 NifZ domain THII_RS15295 PF03206 Nitrogen fixation protein NifW THII_RS15305 PF00682 HMGL-like THII_RS15325 PF03190 Protein of unknown function, DUF255 THII_RS15330 PF02219 Methylenetetrahydrofolate reductase THII_RS15335 PF00072 Response regulator receiver domain THII_RS15335 PF00158 Sigma-54 interaction domain THII_RS15335 PF02954 Bacterial regulatory protein, Fis family THII_RS15340 PF13401 AAA domain THII_RS15340 PF01471 Putative peptidoglycan binding domain THII_RS15345 PF03958 Bacterial type II/III secretion system short domain THII_RS15345 PF00263 Bacterial type II and III secretion system protein THII_RS15350 PF01809 Putative membrane protein insertion efficiency factor THII_RS15355 PF02190 ATP-dependent protease La (LON) substrate-binding domain THII_RS15355 PF00004 ATPase family associated with various cellular activities (AAA) THII_RS15355 PF05362 Lon protease (S16) C-terminal proteolytic domain THII_RS15360 PF17876 Cold shock domain THII_RS15360 PF08461 Ribonuclease R winged-helix domain THII_RS15360 PF08206 Ribonuclease B OB domain THII_RS15360 PF00773 RNB domain THII_RS15360 PF00575 S1 RNA binding domain THII_RS15380 PF00571 CBS domain THII_RS15380 PF03471 Transporter associated domain THII_RS15380 PF01595 Cyclin M transmembrane N-terminal domain THII_RS15390 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit THII_RS15390 PF13187 4Fe-4S dicluster domain THII_RS15395 PF00890 FAD binding domain THII_RS15420 PF00034 Cytochrome c THII_RS15420 PF13442 Cytochrome C oxidase, cbb3-type, subunit III THII_RS15430 PF12704 MacB-like periplasmic core domain THII_RS15430 PF00005 ABC transporter THII_RS15430 PF02687 FtsX-like permease family THII_RS15435 PF12704 MacB-like periplasmic core domain THII_RS15435 PF02687 FtsX-like permease family THII_RS15435 PF00005 ABC transporter THII_RS15460 PF02719 Polysaccharide biosynthesis protein THII_RS15465 PF02397 Bacterial sugar transferase THII_RS15470 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THII_RS15480 PF00534 Glycosyl transferases group 1 THII_RS15480 PF13439 Glycosyltransferase Family 4 THII_RS15490 PF04891 NifQ THII_RS15495 PF00111 2Fe-2S iron-sulfur cluster binding domain THII_RS15500 PF00111 2Fe-2S iron-sulfur cluster binding domain THII_RS15505 PF00753 Metallo-beta-lactamase superfamily THII_RS15505 PF00258 Flavodoxin THII_RS15510 PF00037 4Fe-4S binding domain THII_RS15515 PF04055 Radical SAM superfamily THII_RS15515 PF02579 Dinitrogenase iron-molybdenum cofactor THII_RS15535 PF07992 Pyridine nucleotide-disulphide oxidoreductase THII_RS15535 PF18113 Rubredoxin binding C-terminal domain THII_RS15540 PF01938 TRAM domain THII_RS15540 PF05958 tRNA (Uracil-5-)-methyltransferase THII_RS15550 PF18030 RimK PreATP-grasp domain THII_RS15550 PF08443 RimK-like ATP-grasp domain THII_RS15560 PF00248 Aldo/keto reductase family THII_RS15565 PF12894 Anaphase-promoting complex subunit 4 WD40 domain THII_RS15565 PF00400 WD domain, G-beta repeat THII_RS15570 PF12894 Anaphase-promoting complex subunit 4 WD40 domain THII_RS15570 PF00400 WD domain, G-beta repeat THII_RS15575 PF00211 Adenylate and Guanylate cyclase catalytic domain THII_RS15595 PF00072 Response regulator receiver domain THII_RS15595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS15595 PF00512 His Kinase A (phospho-acceptor) domain THII_RS15595 PF01627 Hpt domain THII_RS15605 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB THII_RS15610 PF01381 Helix-turn-helix THII_RS15625 PF00953 Glycosyl transferase family 4 THII_RS15635 PF01435 Peptidase family M48 THII_RS15640 PF05685 Putative restriction endonuclease THII_RS15660 PF04174 A circularly permuted ATPgrasp THII_RS15685 PF04453 LPS transport system D THII_RS15685 PF03968 OstA-like protein THII_RS15690 PF01259 SAICAR synthetase THII_RS15705 PF01578 Cytochrome C assembly protein THII_RS15705 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal THII_RS15710 PF03100 CcmE THII_RS15715 PF04995 Heme exporter protein D (CcmD) THII_RS15745 PF00005 ABC transporter THII_RS15760 PF00132 Bacterial transferase hexapeptide (six repeats) THII_RS15765 PF00583 Acetyltransferase (GNAT) family THII_RS15765 PF00696 Amino acid kinase family THII_RS15775 PF01546 Peptidase family M20/M25/M40 THII_RS15775 PF07687 Peptidase dimerisation domain THII_RS15780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain THII_RS15780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain THII_RS15805 PF01136 Peptidase family U32 THII_RS15805 PF16325 Peptidase family U32 C-terminal domain THII_RS15810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THII_RS15810 PF17944 Arginine decarboxylase C-terminal helical extension THII_RS15810 PF17810 Arginine decarboxylase helical bundle domain THII_RS15815 PF02464 Competence-damaged protein THII_RS15840 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase THII_RS15840 PF09364 XFP N-terminal domain THII_RS15840 PF09363 XFP C-terminal domain THII_RS15850 PF03808 Glycosyl transferase WecB/TagA/CpsF family THII_RS15860 PF02310 B12 binding domain THII_RS15860 PF04055 Radical SAM superfamily THII_RS15870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THII_RS15880 PF03116 NQR2, RnfD, RnfE family THII_RS15895 PF05523 WxcM-like, C-terminal THII_RS15905 PF13419 Haloacid dehalogenase-like hydrolase THII_RS15915 PF12826 Helix-hairpin-helix motif THII_RS15915 PF03119 NAD-dependent DNA ligase C4 zinc finger domain THII_RS15915 PF03120 NAD-dependent DNA ligase OB-fold domain THII_RS15915 PF01653 NAD-dependent DNA ligase adenylation domain THII_RS15915 PF00533 BRCA1 C Terminus (BRCT) domain THII_RS15930 PF05685 Putative restriction endonuclease THII_RS15940 PF00708 Acylphosphatase THII_RS15940 PF07503 HypF finger THII_RS15940 PF01300 Telomere recombination THII_RS15940 PF17788 HypF Kae1-like domain THII_RS15985 PF02785 Biotin carboxylase C-terminal domain THII_RS15985 PF00289 Biotin carboxylase, N-terminal domain THII_RS15985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THII_RS15990 PF00364 Biotin-requiring enzyme THII_RS15995 PF01220 Dehydroquinase class II THII_RS16015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THII_RS16020 PF00873 AcrB/AcrD/AcrF family THII_RS16035 PF01713 Smr domain THII_RS16040 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain THII_RS16040 PF03900 Porphobilinogen deaminase, C-terminal domain THII_RS16045 PF13614 AAA domain THII_RS16075 PF06165 Glycosyltransferase family 36 THII_RS16075 PF10091 Putative glucoamylase THII_RS16075 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain THII_RS16110 PF05532 CsbD-like THII_RS16130 PF03918 Cytochrome C biogenesis protein THII_RS16165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THII_RS16165 PF07992 Pyridine nucleotide-disulphide oxidoreductase THII_RS16180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain THII_RS16180 PF01568 Molydopterin dinucleotide binding domain THII_RS16180 PF00384 Molybdopterin oxidoreductase THII_RS16185 PF12800 4Fe-4S binding domain THII_RS16185 PF13247 4Fe-4S dicluster domain THII_RS16225 PF05567 Neisseria PilC beta-propeller domain THII_RS16265 PF03462 PCRF domain THII_RS16265 PF00472 RF-1 domain THII_RS16270 PF05209 Septum formation inhibitor MinC, N-terminal domain THII_RS16270 PF03775 Septum formation inhibitor MinC, C-terminal domain THII_RS16275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THII_RS16280 PF03776 Septum formation topological specificity factor MinE THII_RS16300 PF00793 DAHP synthetase I family THII_RS16300 PF18152 DAHP synthase ferredoxin-like domain THII_RS16305 PF07021 Methionine biosynthesis protein MetW THII_RS16305 PF00561 alpha/beta hydrolase fold THII_RS16310 PF00561 alpha/beta hydrolase fold THII_RS16315 PF00588 SpoU rRNA Methylase family THII_RS16320 PF04717 Type VI secretion system, phage-baseplate injector THII_RS16320 PF06715 Gp5 C-terminal repeat (3 copies) THII_RS16360 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system THII_RS16370 PF01923 Cobalamin adenosyltransferase THII_RS16375 PF00482 Type II secretion system (T2SS), protein F THII_RS16390 PF00578 AhpC/TSA family THII_RS16390 PF10417 C-terminal domain of 1-Cys peroxiredoxin THII_RS16410 PF05853 beta-keto acid cleavage enzyme THII_RS16415 PF00583 Acetyltransferase (GNAT) family THII_RS16425 PF03466 LysR substrate binding domain THII_RS16425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family THII_RS16430 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain THII_RS16430 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain THII_RS16435 PF00101 Ribulose bisphosphate carboxylase, small chain THII_RS16450 PF00374 Nickel-dependent hydrogenase THII_RS16455 PF08241 Methyltransferase domain THII_RS16470 PF01895 PhoU domain THII_RS16475 PF00005 ABC transporter THII_RS16480 PF00528 Binding-protein-dependent transport system inner membrane component THII_RS16485 PF00528 Binding-protein-dependent transport system inner membrane component THII_RS16490 PF01242 6-pyruvoyl tetrahydropterin synthase THII_RS16500 PF04247 Invasion gene expression up-regulator, SirB THII_RS16525 PF01894 Uncharacterised protein family UPF0047 THII_RS16530 PF04381 Putative exonuclease, RdgC THII_RS16565 PF01116 Fructose-bisphosphate aldolase class-II THII_RS16570 PF02887 Pyruvate kinase, alpha/beta domain THII_RS16570 PF00224 Pyruvate kinase, barrel domain THII_RS16575 PF00162 Phosphoglycerate kinase THII_RS16580 PF00471 Ribosomal protein L33 THII_RS16590 PF02310 B12 binding domain THII_RS16590 PF02607 B12 binding domain THII_RS16590 PF02965 Vitamin B12 dependent methionine synthase, activation domain THII_RS16590 PF00809 Pterin binding enzyme THII_RS16590 PF02574 Homocysteine S-methyltransferase THII_RS16600 PF01627 Hpt domain THII_RS16600 PF00512 His Kinase A (phospho-acceptor) domain THII_RS16600 PF00072 Response regulator receiver domain THII_RS16600 PF00497 Bacterial extracellular solute-binding proteins, family 3 THII_RS16600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS16610 PF07885 Ion channel THII_RS16610 PF00027 Cyclic nucleotide-binding domain THII_RS16625 PF03781 Sulfatase-modifying factor enzyme 1 THII_RS16625 PF12867 DinB superfamily THII_RS16630 PF10017 Histidine-specific methyltransferase, SAM-dependent THII_RS16645 PF00445 Ribonuclease T2 family THII_RS16650 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system THII_RS16680 PF02629 CoA binding domain THII_RS16680 PF00549 CoA-ligase THII_RS16685 PF00549 CoA-ligase THII_RS16685 PF08442 ATP-grasp domain THII_RS16690 PF14437 MafB19-like deaminase THII_RS16695 PF03129 Anticodon binding domain THII_RS16695 PF13393 Histidyl-tRNA synthetase THII_RS16700 PF09976 Tetratricopeptide repeat-like domain THII_RS16705 PF13360 PQQ-like domain THII_RS16735 PF00672 HAMP domain THII_RS16735 PF07228 Stage II sporulation protein E (SpoIIE) THII_RS16805 PF00155 Aminotransferase class I and II THII_RS16810 PF01842 ACT domain THII_RS16810 PF00800 Prephenate dehydratase THII_RS16810 PF01817 Chorismate mutase type II THII_RS16815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THII_RS16820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THII_RS16830 PF00106 short chain dehydrogenase THII_RS16850 PF00482 Type II secretion system (T2SS), protein F THII_RS16855 PF00155 Aminotransferase class I and II THII_RS16860 PF03447 Homoserine dehydrogenase, NAD binding domain THII_RS16860 PF00742 Homoserine dehydrogenase THII_RS16860 PF01842 ACT domain THII_RS16880 PF03840 Preprotein translocase SecG subunit THII_RS16885 PF00121 Triosephosphate isomerase THII_RS16895 PF00815 Histidinol dehydrogenase THII_RS16900 PF13419 Haloacid dehalogenase-like hydrolase THII_RS16920 PF03653 Uncharacterised protein family (UPF0093) THII_RS16925 PF00625 Guanylate kinase THII_RS16930 PF03755 YicC-like family, N-terminal region THII_RS16930 PF08340 Domain of unknown function (DUF1732) THII_RS16935 PF00512 His Kinase A (phospho-acceptor) domain THII_RS16935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS16935 PF01627 Hpt domain THII_RS16935 PF00989 PAS fold THII_RS16935 PF00072 Response regulator receiver domain THII_RS16935 PF18415 Histidine kinase receptor ArcB trans-membrane domain THII_RS16960 PF00563 EAL domain THII_RS16960 PF00990 Diguanylate cyclase, GGDEF domain THII_RS16960 PF08447 PAS fold THII_RS16960 PF08448 PAS fold THII_RS16965 PF03144 Elongation factor Tu domain 2 THII_RS16965 PF00009 Elongation factor Tu GTP binding domain THII_RS16965 PF00679 Elongation factor G C-terminus THII_RS16975 PF00498 FHA domain THII_RS16975 PF01061 ABC-2 type transporter THII_RS16975 PF00005 ABC transporter THII_RS16980 PF01761 3-dehydroquinate synthase THII_RS16985 PF01202 Shikimate kinase THII_RS17015 PF00575 S1 RNA binding domain THII_RS17015 PF12111 Polyribonucleotide phosphorylase C terminal THII_RS17015 PF10150 Ribonuclease E/G family THII_RS17020 PF00849 RNA pseudouridylate synthase THII_RS17020 PF01479 S4 domain THII_RS17025 PF13419 Haloacid dehalogenase-like hydrolase THII_RS17030 PF06965 Na+/H+ antiporter 1 THII_RS17030 PF01343 Peptidase family S49 THII_RS17040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) THII_RS17045 PF02641 Uncharacterized ACR, COG1993 THII_RS17050 PF02537 CrcB-like protein, Camphor Resistance (CrcB) THII_RS17055 PF02641 Uncharacterized ACR, COG1993 THII_RS17060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THII_RS17060 PF02403 Seryl-tRNA synthetase N-terminal domain THII_RS17085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THII_RS17085 PF07992 Pyridine nucleotide-disulphide oxidoreductase THII_RS17090 PF02817 e3 binding domain THII_RS17090 PF00364 Biotin-requiring enzyme THII_RS17090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) THII_RS17095 PF02779 Transketolase, pyrimidine binding domain THII_RS17095 PF16870 2-oxoglutarate dehydrogenase C-terminal THII_RS17095 PF00676 Dehydrogenase E1 component THII_RS17095 PF16078 2-oxoglutarate dehydrogenase N-terminus THII_RS17100 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain THII_RS17100 PF00056 lactate/malate dehydrogenase, NAD binding domain THII_RS17110 PF00672 HAMP domain THII_RS17110 PF01627 Hpt domain THII_RS17110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS17110 PF00512 His Kinase A (phospho-acceptor) domain THII_RS17110 PF00072 Response regulator receiver domain THII_RS17110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS17115 PF00072 Response regulator receiver domain THII_RS17115 PF00486 Transcriptional regulatory protein, C terminal THII_RS17145 PF00842 Alanine racemase, C-terminal domain THII_RS17145 PF01168 Alanine racemase, N-terminal domain THII_RS17150 PF14528 LAGLIDADG-like domain THII_RS17150 PF03796 DnaB-like helicase C terminal domain THII_RS17150 PF00772 DnaB-like helicase N terminal domain THII_RS17155 PF01281 Ribosomal protein L9, N-terminal domain THII_RS17155 PF03948 Ribosomal protein L9, C-terminal domain THII_RS17160 PF01084 Ribosomal protein S18 THII_RS17165 PF01250 Ribosomal protein S6 THII_RS17175 PF04079 Segregation and condensation complex subunit ScpB THII_RS17180 PF02616 Segregation and condensation protein ScpA THII_RS17185 PF00579 tRNA synthetases class I (W and Y) THII_RS17190 PF02163 Peptidase family M50 THII_RS17195 PF01300 Telomere recombination THII_RS17200 PF02390 Putative methyltransferase THII_RS17205 PF00072 Response regulator receiver domain THII_RS17210 PF01627 Hpt domain THII_RS17210 PF00072 Response regulator receiver domain THII_RS17210 PF00497 Bacterial extracellular solute-binding proteins, family 3 THII_RS17210 PF00512 His Kinase A (phospho-acceptor) domain THII_RS17210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS17220 PF01523 Putative modulator of DNA gyrase THII_RS17230 PF00186 Dihydrofolate reductase THII_RS17235 PF01258 Prokaryotic dksA/traR C4-type zinc finger THII_RS17250 PF05050 Methyltransferase FkbM domain THII_RS17270 PF00155 Aminotransferase class I and II THII_RS17295 PF04073 Aminoacyl-tRNA editing domain THII_RS17295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THII_RS17295 PF03129 Anticodon binding domain THII_RS17300 PF00912 Transglycosylase THII_RS17300 PF00905 Penicillin binding protein transpeptidase domain THII_RS17300 PF06832 Penicillin-Binding Protein C-terminus Family THII_RS17315 PF00534 Glycosyl transferases group 1 THII_RS17315 PF08323 Starch synthase catalytic domain THII_RS17325 PF01075 Glycosyltransferase family 9 (heptosyltransferase) THII_RS17335 PF08323 Starch synthase catalytic domain THII_RS17335 PF00534 Glycosyl transferases group 1 THII_RS17370 PF00364 Biotin-requiring enzyme THII_RS17370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) THII_RS17370 PF02817 e3 binding domain THII_RS17375 PF00456 Transketolase, thiamine diphosphate binding domain THII_RS17375 PF17831 Pyruvate dehydrogenase E1 component middle domain THII_RS17415 PF04359 Protein of unknown function (DUF493) THII_RS17420 PF01063 Amino-transferase class IV THII_RS17425 PF00768 D-alanyl-D-alanine carboxypeptidase THII_RS17425 PF07943 Penicillin-binding protein 5, C-terminal domain THII_RS17430 PF05036 Sporulation related domain THII_RS17430 PF03330 Lytic transglycolase THII_RS17435 PF13406 Transglycosylase SLT domain THII_RS17440 PF01098 Cell cycle protein THII_RS17445 PF00905 Penicillin binding protein transpeptidase domain THII_RS17445 PF03717 Penicillin-binding Protein dimerisation domain THII_RS17450 PF04093 rod shape-determining protein MreD THII_RS17455 PF04085 rod shape-determining protein MreC THII_RS17465 PF02686 Glu-tRNAGln amidotransferase C subunit THII_RS17470 PF01425 Amidase THII_RS17475 PF02934 GatB/GatE catalytic domain THII_RS17475 PF02637 GatB domain THII_RS17505 PF00692 dUTPase THII_RS17510 PF10609 NUBPL iron-transfer P-loop NTPase THII_RS17515 PF00571 CBS domain THII_RS17520 PF02384 N-6 DNA Methylase THII_RS17530 PF01497 Periplasmic binding protein THII_RS17555 PF04228 Putative neutral zinc metallopeptidase THII_RS17575 PF00206 Lyase THII_RS17575 PF08328 Adenylosuccinate lyase C-terminal THII_RS17580 PF02401 LytB protein THII_RS17585 PF01455 HupF/HypC family THII_RS17590 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA THII_RS17600 PF13180 PDZ domain THII_RS17600 PF00595 PDZ domain THII_RS17605 PF00348 Polyprenyl synthetase THII_RS17635 PF02421 Ferrous iron transport protein B THII_RS17635 PF17910 FeoB cytosolic helical domain THII_RS17635 PF07664 Ferrous iron transport protein B C terminus THII_RS17635 PF07670 Nucleoside recognition THII_RS17680 PF00682 HMGL-like THII_RS17680 PF08502 LeuA allosteric (dimerisation) domain THII_RS17700 PF01061 ABC-2 type transporter THII_RS17705 PF00005 ABC transporter THII_RS17720 PF02470 MlaD protein THII_RS17725 PF13191 AAA ATPase domain THII_RS17725 PF00211 Adenylate and Guanylate cyclase catalytic domain THII_RS17730 PF00180 Isocitrate/isopropylmalate dehydrogenase THII_RS17745 PF02463 RecF/RecN/SMC N terminal domain THII_RS17755 PF13537 Glutamine amidotransferase domain THII_RS17755 PF00733 Asparagine synthase THII_RS17770 PF01040 UbiA prenyltransferase family THII_RS17775 PF00089 Trypsin THII_RS17780 PF02618 YceG-like family THII_RS17785 PF00109 Beta-ketoacyl synthase, N-terminal domain THII_RS17785 PF02801 Beta-ketoacyl synthase, C-terminal domain THII_RS17790 PF00550 Phosphopantetheine attachment site THII_RS17800 PF00698 Acyl transferase domain THII_RS17805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal THII_RS17805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III THII_RS17810 PF02504 Fatty acid synthesis protein THII_RS17815 PF01783 Ribosomal L32p protein family THII_RS17820 PF02620 Large ribosomal RNA subunit accumulation protein YceD THII_RS17825 PF02545 Maf-like protein THII_RS17830 PF01750 Hydrogenase maturation protease THII_RS17845 PF00403 Heavy-metal-associated domain THII_RS17850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase THII_RS17850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase THII_RS17855 PF00580 UvrD/REP helicase N-terminal domain THII_RS17855 PF13361 UvrD-like helicase C-terminal domain THII_RS17860 PF13520 Amino acid permease THII_RS17915 PF00809 Pterin binding enzyme THII_RS17925 PF00004 ATPase family associated with various cellular activities (AAA) THII_RS17925 PF17862 AAA+ lid domain THII_RS17925 PF06480 FtsH Extracellular THII_RS17925 PF01434 Peptidase family M41 THII_RS17930 PF01728 FtsJ-like methyltransferase THII_RS17940 PF01966 HD domain THII_RS17940 PF08335 GlnD PII-uridylyltransferase THII_RS17940 PF01909 Nucleotidyltransferase domain THII_RS17945 PF00149 Calcineurin-like phosphoesterase THII_RS17950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD THII_RS17955 PF00107 Zinc-binding dehydrogenase THII_RS17955 PF08240 Alcohol dehydrogenase GroES-like domain THII_RS17970 PF00211 Adenylate and Guanylate cyclase catalytic domain THII_RS17975 PF00218 Indole-3-glycerol phosphate synthase THII_RS17980 PF02885 Glycosyl transferase family, helical bundle domain THII_RS17980 PF00591 Glycosyl transferase family, a/b domain THII_RS17985 PF03600 Citrate transporter THII_RS17985 PF02080 TrkA-C domain THII_RS17995 PF03725 3' exoribonuclease family, domain 2 THII_RS17995 PF01138 3' exoribonuclease family, domain 1 THII_RS18000 PF00226 DnaJ domain THII_RS18000 PF01556 DnaJ C terminal domain THII_RS18000 PF00684 DnaJ central domain THII_RS18005 PF00113 Enolase, C-terminal TIM barrel domain THII_RS18005 PF03952 Enolase, N-terminal domain THII_RS18010 PF00793 DAHP synthetase I family THII_RS18020 PF01965 DJ-1/PfpI family THII_RS18025 PF01380 SIS domain THII_RS18050 PF04349 Periplasmic glucan biosynthesis protein, MdoG THII_RS18060 PF00535 Glycosyl transferase family 2 THII_RS18065 PF04389 Peptidase family M28 THII_RS18125 PF04055 Radical SAM superfamily THII_RS18125 PF13186 Iron-sulfur cluster-binding domain THII_RS18135 PF00582 Universal stress protein family THII_RS18145 PF01435 Peptidase family M48 THII_RS18150 PF00929 Exonuclease THII_RS18155 PF03853 YjeF-related protein N-terminus THII_RS18155 PF01256 Carbohydrate kinase THII_RS18160 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE THII_RS18165 PF01370 NAD dependent epimerase/dehydratase family THII_RS18205 PF01609 Transposase DDE domain THII_RS18210 PF13340 Putative transposase of IS4/5 family (DUF4096) THII_RS18225 PF01924 Hydrogenase formation hypA family THII_RS18300 PF07992 Pyridine nucleotide-disulphide oxidoreductase THII_RS18300 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THII_RS18310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THII_RS18315 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg THII_RS18315 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II THII_RS18320 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase THII_RS18345 PF00425 chorismate binding enzyme THII_RS18345 PF04715 Anthranilate synthase component I, N terminal region THII_RS18350 PF13419 Haloacid dehalogenase-like hydrolase THII_RS18355 PF00834 Ribulose-phosphate 3 epimerase family THII_RS18370 PF03738 Glutathionylspermidine synthase preATP-grasp THII_RS18370 PF05257 CHAP domain THII_RS18375 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) THII_RS18385 PF06969 HemN C-terminal domain THII_RS18385 PF04055 Radical SAM superfamily THII_RS18405 PF02541 Ppx/GppA phosphatase family THII_RS18415 PF00762 Ferrochelatase THII_RS18420 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THII_RS18420 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THII_RS18430 PF16861 Carbamoyltransferase C-terminus THII_RS18430 PF02543 Carbamoyltransferase N-terminus THII_RS18440 PF00072 Response regulator receiver domain THII_RS18440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS18440 PF01627 Hpt domain THII_RS18440 PF00672 HAMP domain THII_RS18440 PF00512 His Kinase A (phospho-acceptor) domain THII_RS18440 PF17149 Periplasmic sensor domain found in signal transduction proteins THII_RS18450 PF01180 Dihydroorotate dehydrogenase THII_RS18455 PF17674 HHH domain THII_RS18455 PF09371 Tex-like protein N-terminal domain THII_RS18455 PF00575 S1 RNA binding domain THII_RS18455 PF16921 Tex protein YqgF-like domain THII_RS18460 PF01555 DNA methylase THII_RS18470 PF04898 Glutamate synthase central domain THII_RS18470 PF01645 Conserved region in glutamate synthase THII_RS18470 PF01493 GXGXG motif THII_RS18470 PF00310 Glutamine amidotransferases class-II THII_RS18495 PF01381 Helix-turn-helix THII_RS18500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS18500 PF09308 LuxQ, periplasmic THII_RS18500 PF00072 Response regulator receiver domain THII_RS18500 PF00512 His Kinase A (phospho-acceptor) domain THII_RS18510 PF00300 Histidine phosphatase superfamily (branch 1) THII_RS18515 PF00117 Glutamine amidotransferase class-I THII_RS18515 PF02540 NAD synthase THII_RS18515 PF00958 GMP synthase C terminal domain THII_RS18520 PF00639 PPIC-type PPIASE domain THII_RS18525 PF00174 Oxidoreductase molybdopterin binding domain THII_RS18530 PF01794 Ferric reductase like transmembrane component THII_RS18540 PF01648 4'-phosphopantetheinyl transferase superfamily THII_RS18550 PF02602 Uroporphyrinogen-III synthase HemD THII_RS18555 PF17760 UvrA interaction domain THII_RS18555 PF17755 UvrA DNA-binding domain THII_RS18560 PF00561 alpha/beta hydrolase fold THII_RS18615 PF13358 DDE superfamily endonuclease THII_RS18640 PF00271 Helicase conserved C-terminal domain THII_RS18640 PF04851 Type III restriction enzyme, res subunit THII_RS18640 PF02151 UvrB/uvrC motif THII_RS18640 PF12344 Ultra-violet resistance protein B THII_RS18640 PF17757 UvrB interaction domain THII_RS18645 PF00155 Aminotransferase class I and II THII_RS18660 PF13932 GidA associated domain THII_RS18660 PF01134 Glucose inhibited division protein A THII_RS18665 PF17284 Spermidine synthase tetramerisation domain THII_RS18670 PF03167 Uracil DNA glycosylase superfamily THII_RS18685 PF01734 Patatin-like phospholipase THII_RS18700 PF07687 Peptidase dimerisation domain THII_RS18700 PF01546 Peptidase family M20/M25/M40 THII_RS18710 PF00194 Eukaryotic-type carbonic anhydrase THII_RS18735 PF00300 Histidine phosphatase superfamily (branch 1) THII_RS18740 PF01551 Peptidase family M23 THII_RS18745 PF13180 PDZ domain THII_RS18745 PF03572 Peptidase family S41 THII_RS18750 PF01965 DJ-1/PfpI family THII_RS18755 PF00285 Citrate synthase, C-terminal domain THII_RS18760 PF10605 3HB-oligomer hydrolase (3HBOH) THII_RS18790 PF03793 PASTA domain THII_RS18790 PF00069 Protein kinase domain THII_RS18800 PF00563 EAL domain THII_RS18800 PF01590 GAF domain THII_RS18800 PF00990 Diguanylate cyclase, GGDEF domain THII_RS18800 PF00360 Phytochrome region THII_RS18825 PF07992 Pyridine nucleotide-disulphide oxidoreductase THII_RS18830 PF01012 Electron transfer flavoprotein domain THII_RS18830 PF00766 Electron transfer flavoprotein FAD-binding domain THII_RS18835 PF01012 Electron transfer flavoprotein domain THII_RS18840 PF02463 RecF/RecN/SMC N terminal domain THII_RS18845 PF04480 Protein of unknown function (DUF559) THII_RS18865 PF00999 Sodium/hydrogen exchanger family THII_RS18870 PF01329 Pterin 4 alpha carbinolamine dehydratase THII_RS18880 PF07685 CobB/CobQ-like glutamine amidotransferase domain THII_RS18880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THII_RS18885 PF00691 OmpA family THII_RS18915 PF00474 Sodium:solute symporter family THII_RS18920 PF04341 Protein of unknown function, DUF485 THII_RS18930 PF01370 NAD dependent epimerase/dehydratase family THII_RS18940 PF01381 Helix-turn-helix THII_RS18940 PF00717 Peptidase S24-like THII_RS18945 PF01118 Semialdehyde dehydrogenase, NAD binding domain THII_RS18945 PF02774 Semialdehyde dehydrogenase, dimerisation domain THII_RS18960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS18960 PF13188 PAS domain THII_RS18960 PF08448 PAS fold THII_RS18960 PF00072 Response regulator receiver domain THII_RS18960 PF00512 His Kinase A (phospho-acceptor) domain THII_RS18965 PF04186 FxsA cytoplasmic membrane protein THII_RS18970 PF03091 CutA1 divalent ion tolerance protein THII_RS18975 PF02683 Cytochrome C biogenesis protein transmembrane region THII_RS18975 PF11412 Disulphide bond corrector protein DsbC THII_RS18980 PF00578 AhpC/TSA family THII_RS19000 PF00072 Response regulator receiver domain THII_RS19010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS19010 PF00497 Bacterial extracellular solute-binding proteins, family 3 THII_RS19010 PF00072 Response regulator receiver domain THII_RS19010 PF00512 His Kinase A (phospho-acceptor) domain THII_RS19010 PF01627 Hpt domain THII_RS19010 PF00989 PAS fold THII_RS19015 PF00210 Ferritin-like domain THII_RS19025 PF01327 Polypeptide deformylase THII_RS19050 PF07963 Prokaryotic N-terminal methylation motif THII_RS19050 PF00114 Pilin (bacterial filament) THII_RS19090 PF00380 Ribosomal protein S9/S16 THII_RS19095 PF00572 Ribosomal protein L13 THII_RS19125 PF00072 Response regulator receiver domain THII_RS19125 PF00486 Transcriptional regulatory protein, C terminal THII_RS19135 PF13085 2Fe-2S iron-sulfur cluster binding domain THII_RS19135 PF13183 4Fe-4S dicluster domain THII_RS19140 PF01464 Transglycosylase SLT domain THII_RS19140 PF01551 Peptidase family M23 THII_RS19140 PF10145 Phage-related minor tail protein THII_RS19155 PF01264 Chorismate synthase THII_RS19175 PF14815 NUDIX domain THII_RS19175 PF00730 HhH-GPD superfamily base excision DNA repair protein THII_RS19175 PF00633 Helix-hairpin-helix motif THII_RS19180 PF04362 Bacterial Fe(2+) trafficking THII_RS19190 PF02261 Aspartate decarboxylase THII_RS19195 PF10150 Ribonuclease E/G family THII_RS19195 PF00575 S1 RNA binding domain THII_RS19205 PF00158 Sigma-54 interaction domain THII_RS19205 PF02954 Bacterial regulatory protein, Fis family THII_RS19205 PF00072 Response regulator receiver domain THII_RS19210 PF01921 tRNA synthetases class I (K) THII_RS19240 PF00886 Ribosomal protein S16 THII_RS19245 PF05239 PRC-barrel domain THII_RS19245 PF01782 RimM N-terminal domain THII_RS19250 PF01746 tRNA (Guanine-1)-methyltransferase THII_RS19255 PF01245 Ribosomal protein L19 THII_RS19290 PF00990 Diguanylate cyclase, GGDEF domain THII_RS19290 PF00563 EAL domain THII_RS19290 PF03707 Bacterial signalling protein N terminal repeat THII_RS19300 PF16200 C-terminal region of band_7 THII_RS19300 PF01145 SPFH domain / Band 7 family THII_RS19305 PF02810 SEC-C motif THII_RS19305 PF07517 SecA DEAD-like domain THII_RS19305 PF01043 SecA preprotein cross-linking domain THII_RS19305 PF07516 SecA Wing and Scaffold domain THII_RS19320 PF00583 Acetyltransferase (GNAT) family THII_RS19325 PF03167 Uracil DNA glycosylase superfamily THII_RS19330 PF08502 LeuA allosteric (dimerisation) domain THII_RS19330 PF00682 HMGL-like THII_RS19335 PF02566 OsmC-like protein THII_RS19345 PF02675 S-adenosylmethionine decarboxylase THII_RS19350 PF00753 Metallo-beta-lactamase superfamily THII_RS19360 PF00072 Response regulator receiver domain THII_RS19370 PF03309 Type III pantothenate kinase THII_RS19375 PF03099 Biotin/lipoate A/B protein ligase family THII_RS19375 PF02237 Biotin protein ligase C terminal domain THII_RS19380 PF01467 Cytidylyltransferase-like THII_RS19400 PF00005 ABC transporter THII_RS19400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THII_RS19410 PF03279 Bacterial lipid A biosynthesis acyltransferase THII_RS19425 PF07662 Na+ dependent nucleoside transporter C-terminus THII_RS19425 PF01773 Na+ dependent nucleoside transporter N-terminus THII_RS19425 PF07670 Nucleoside recognition THII_RS19455 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family THII_RS19480 PF02660 Glycerol-3-phosphate acyltransferase THII_RS19485 PF00912 Transglycosylase THII_RS19485 PF17092 Penicillin-binding protein OB-like domain THII_RS19485 PF00905 Penicillin binding protein transpeptidase domain THII_RS19490 PF11104 Type IV pilus assembly protein PilM; THII_RS19495 PF05137 Fimbrial assembly protein (PilN) THII_RS19515 PF03958 Bacterial type II/III secretion system short domain THII_RS19515 PF07660 Secretin and TonB N terminus short domain THII_RS19515 PF11741 AMIN domain THII_RS19515 PF00263 Bacterial type II and III secretion system protein THII_RS19535 PF02769 AIR synthase related protein, C-terminal domain THII_RS19535 PF00586 AIR synthase related protein, N-terminal domain THII_RS19540 PF00551 Formyl transferase THII_RS19555 PF00764 Arginosuccinate synthase THII_RS19570 PF00873 AcrB/AcrD/AcrF family THII_RS19575 PF00529 HlyD membrane-fusion protein of T1SS THII_RS19575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THII_RS19585 PF01510 N-acetylmuramoyl-L-alanine amidase THII_RS19600 PF04012 PspA/IM30 family THII_RS19655 PF00535 Glycosyl transferase family 2 THII_RS19665 PF00072 Response regulator receiver domain THII_RS19665 PF00486 Transcriptional regulatory protein, C terminal THII_RS19705 PF00535 Glycosyl transferase family 2 THII_RS19715 PF01047 MarR family THII_RS19750 PF00069 Protein kinase domain THII_RS19750 PF03793 PASTA domain THII_RS19755 PF00512 His Kinase A (phospho-acceptor) domain THII_RS19755 PF01627 Hpt domain THII_RS19755 PF00072 Response regulator receiver domain THII_RS19755 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS19755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS19755 PF00672 HAMP domain THII_RS19765 PF00082 Subtilase family THII_RS19765 PF05922 Peptidase inhibitor I9 THII_RS19785 PF00072 Response regulator receiver domain THII_RS19785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS19785 PF00512 His Kinase A (phospho-acceptor) domain THII_RS19785 PF09308 LuxQ, periplasmic THII_RS19790 PF00211 Adenylate and Guanylate cyclase catalytic domain THII_RS19790 PF00672 HAMP domain THII_RS19805 PF02630 SCO1/SenC THII_RS19830 PF00672 HAMP domain THII_RS19830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS19830 PF00512 His Kinase A (phospho-acceptor) domain THII_RS19830 PF01627 Hpt domain THII_RS19830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS19830 PF00072 Response regulator receiver domain THII_RS19835 PF04354 ZipA, C-terminal FtsZ-binding domain THII_RS19850 PF03306 Alpha-acetolactate decarboxylase THII_RS19855 PF03306 Alpha-acetolactate decarboxylase THII_RS19860 PF00535 Glycosyl transferase family 2 THII_RS19875 PF00512 His Kinase A (phospho-acceptor) domain THII_RS19875 PF18415 Histidine kinase receptor ArcB trans-membrane domain THII_RS19875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS19875 PF01627 Hpt domain THII_RS19875 PF00989 PAS fold THII_RS19875 PF00072 Response regulator receiver domain THII_RS19880 PF03707 Bacterial signalling protein N terminal repeat THII_RS19880 PF00990 Diguanylate cyclase, GGDEF domain THII_RS19880 PF00563 EAL domain THII_RS19910 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain THII_RS19910 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain THII_RS19915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS19915 PF00512 His Kinase A (phospho-acceptor) domain THII_RS19915 PF00072 Response regulator receiver domain THII_RS19915 PF00672 HAMP domain THII_RS19915 PF01627 Hpt domain THII_RS19915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS19925 PF01464 Transglycosylase SLT domain THII_RS19925 PF01476 LysM domain THII_RS19930 PF05231 MASE1 THII_RS19930 PF07730 Histidine kinase THII_RS19930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS19935 PF00672 HAMP domain THII_RS19935 PF02203 Tar ligand binding domain homologue THII_RS19935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS19985 PF00072 Response regulator receiver domain THII_RS19985 PF01627 Hpt domain THII_RS19985 PF00512 His Kinase A (phospho-acceptor) domain THII_RS19985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS19990 PF08448 PAS fold THII_RS19990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS19990 PF00512 His Kinase A (phospho-acceptor) domain THII_RS19990 PF13426 PAS domain THII_RS19990 PF00072 Response regulator receiver domain THII_RS19995 PF00497 Bacterial extracellular solute-binding proteins, family 3 THII_RS19995 PF00072 Response regulator receiver domain THII_RS19995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS19995 PF00512 His Kinase A (phospho-acceptor) domain THII_RS19995 PF00989 PAS fold THII_RS19995 PF01627 Hpt domain THII_RS20015 PF01209 ubiE/COQ5 methyltransferase family THII_RS20040 PF00072 Response regulator receiver domain THII_RS20040 PF00990 Diguanylate cyclase, GGDEF domain THII_RS20045 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20045 PF00989 PAS fold THII_RS20055 PF00672 HAMP domain THII_RS20055 PF00072 Response regulator receiver domain THII_RS20055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20055 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20055 PF01627 Hpt domain THII_RS20055 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS20080 PF03781 Sulfatase-modifying factor enzyme 1 THII_RS20080 PF00069 Protein kinase domain THII_RS20085 PF13442 Cytochrome C oxidase, cbb3-type, subunit III THII_RS20100 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS20100 PF00672 HAMP domain THII_RS20100 PF00072 Response regulator receiver domain THII_RS20100 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20100 PF01627 Hpt domain THII_RS20100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20105 PF01464 Transglycosylase SLT domain THII_RS20105 PF10145 Phage-related minor tail protein THII_RS20105 PF01551 Peptidase family M23 THII_RS20115 PF00563 EAL domain THII_RS20115 PF03707 Bacterial signalling protein N terminal repeat THII_RS20115 PF00990 Diguanylate cyclase, GGDEF domain THII_RS20120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20120 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20120 PF09308 LuxQ, periplasmic THII_RS20120 PF00072 Response regulator receiver domain THII_RS20130 PF00535 Glycosyl transferase family 2 THII_RS20135 PF11849 Domain of unknown function (DUF3369) THII_RS20150 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20150 PF18415 Histidine kinase receptor ArcB trans-membrane domain THII_RS20150 PF01627 Hpt domain THII_RS20150 PF00989 PAS fold THII_RS20150 PF00072 Response regulator receiver domain THII_RS20150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20175 PF00211 Adenylate and Guanylate cyclase catalytic domain THII_RS20175 PF00072 Response regulator receiver domain THII_RS20195 PF01590 GAF domain THII_RS20195 PF00990 Diguanylate cyclase, GGDEF domain THII_RS20195 PF00360 Phytochrome region THII_RS20195 PF00563 EAL domain THII_RS20225 PF00082 Subtilase family THII_RS20235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20235 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20235 PF00072 Response regulator receiver domain THII_RS20235 PF00497 Bacterial extracellular solute-binding proteins, family 3 THII_RS20255 PF12729 Four helix bundle sensory module for signal transduction THII_RS20255 PF00672 HAMP domain THII_RS20255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS20260 PF00535 Glycosyl transferase family 2 THII_RS20265 PF01968 Hydantoinase/oxoprolinase THII_RS20265 PF05378 Hydantoinase/oxoprolinase N-terminal region THII_RS20270 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20270 PF00072 Response regulator receiver domain THII_RS20270 PF09308 LuxQ, periplasmic THII_RS20270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20275 PF02086 D12 class N6 adenine-specific DNA methyltransferase THII_RS20280 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20280 PF00072 Response regulator receiver domain THII_RS20280 PF09308 LuxQ, periplasmic THII_RS20280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20285 PF00072 Response regulator receiver domain THII_RS20290 PF01584 CheW-like domain THII_RS20295 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term THII_RS20295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS20345 PF12894 Anaphase-promoting complex subunit 4 WD40 domain THII_RS20345 PF00400 WD domain, G-beta repeat THII_RS20355 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20355 PF00072 Response regulator receiver domain THII_RS20355 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS20355 PF01627 Hpt domain THII_RS20355 PF00672 HAMP domain THII_RS20355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20360 PF09115 DNA polymerase III, delta subunit, C terminal THII_RS20390 PF00072 Response regulator receiver domain THII_RS20390 PF09308 LuxQ, periplasmic THII_RS20390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20390 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20400 PF13665 Domain of unknown function (DUF4150) THII_RS20400 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 THII_RS20405 PF00684 DnaJ central domain THII_RS20405 PF01556 DnaJ C terminal domain THII_RS20405 PF00226 DnaJ domain THII_RS20415 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS20415 PF01627 Hpt domain THII_RS20415 PF00672 HAMP domain THII_RS20415 PF00072 Response regulator receiver domain THII_RS20420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS20420 PF02203 Tar ligand binding domain homologue THII_RS20420 PF00672 HAMP domain THII_RS20430 PF02397 Bacterial sugar transferase THII_RS20455 PF00072 Response regulator receiver domain THII_RS20455 PF09308 LuxQ, periplasmic THII_RS20455 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20460 PF01551 Peptidase family M23 THII_RS20490 PF05922 Peptidase inhibitor I9 THII_RS20490 PF00082 Subtilase family THII_RS20495 PF04389 Peptidase family M28 THII_RS20495 PF02225 PA domain THII_RS20510 PF04055 Radical SAM superfamily THII_RS20510 PF13186 Iron-sulfur cluster-binding domain THII_RS20520 PF05175 Methyltransferase small domain THII_RS20560 PF01590 GAF domain THII_RS20560 PF00563 EAL domain THII_RS20560 PF00990 Diguanylate cyclase, GGDEF domain THII_RS20560 PF00989 PAS fold THII_RS20565 PF00563 EAL domain THII_RS20565 PF00990 Diguanylate cyclase, GGDEF domain THII_RS20565 PF08448 PAS fold THII_RS20570 PF00072 Response regulator receiver domain THII_RS20570 PF01627 Hpt domain THII_RS20570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) THII_RS20570 PF00672 HAMP domain THII_RS20570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20570 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20575 PF00563 EAL domain THII_RS20575 PF03707 Bacterial signalling protein N terminal repeat THII_RS20575 PF00990 Diguanylate cyclase, GGDEF domain THII_RS20590 PF00990 Diguanylate cyclase, GGDEF domain THII_RS20590 PF01590 GAF domain THII_RS20590 PF00360 Phytochrome region THII_RS20590 PF00563 EAL domain THII_RS20595 PF11849 Domain of unknown function (DUF3369) THII_RS20630 PF01476 LysM domain THII_RS20630 PF08525 Opacity-associated protein A N-terminal motif THII_RS20630 PF01551 Peptidase family M23 THII_RS20640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS20640 PF00672 HAMP domain THII_RS20640 PF02203 Tar ligand binding domain homologue THII_RS20650 PF00672 HAMP domain THII_RS20650 PF02203 Tar ligand binding domain homologue THII_RS20650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS20660 PF03793 PASTA domain THII_RS20660 PF00069 Protein kinase domain THII_RS20700 PF07731 Multicopper oxidase THII_RS20700 PF07732 Multicopper oxidase THII_RS20700 PF00394 Multicopper oxidase THII_RS20715 PF14525 AraC-binding-like domain THII_RS20715 PF12833 Helix-turn-helix domain THII_RS20720 PF12019 Type II transport protein GspH THII_RS20720 PF07963 Prokaryotic N-terminal methylation motif THII_RS20730 PF00072 Response regulator receiver domain THII_RS20735 PF00989 PAS fold THII_RS20735 PF01627 Hpt domain THII_RS20735 PF00072 Response regulator receiver domain THII_RS20735 PF18415 Histidine kinase receptor ArcB trans-membrane domain THII_RS20735 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20740 PF00072 Response regulator receiver domain THII_RS20740 PF01627 Hpt domain THII_RS20740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20740 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20765 PF04717 Type VI secretion system, phage-baseplate injector THII_RS20770 PF04717 Type VI secretion system, phage-baseplate injector THII_RS20770 PF06715 Gp5 C-terminal repeat (3 copies) THII_RS20780 PF00072 Response regulator receiver domain THII_RS20780 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20780 PF09308 LuxQ, periplasmic THII_RS20785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS20785 PF00672 HAMP domain THII_RS20790 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20790 PF09308 LuxQ, periplasmic THII_RS20790 PF00072 Response regulator receiver domain THII_RS20790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20805 PF01464 Transglycosylase SLT domain THII_RS20805 PF10145 Phage-related minor tail protein THII_RS20805 PF01551 Peptidase family M23 THII_RS20820 PF01594 AI-2E family transporter THII_RS20825 PF07494 Two component regulator propeller THII_RS20825 PF07495 Y_Y_Y domain THII_RS20825 PF00072 Response regulator receiver domain THII_RS20825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20825 PF12833 Helix-turn-helix domain THII_RS20825 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20850 PF00563 EAL domain THII_RS20850 PF00990 Diguanylate cyclase, GGDEF domain THII_RS20850 PF03707 Bacterial signalling protein N terminal repeat THII_RS20855 PF05922 Peptidase inhibitor I9 THII_RS20855 PF00082 Subtilase family THII_RS20860 PF11849 Domain of unknown function (DUF3369) THII_RS20875 PF00989 PAS fold THII_RS20875 PF00072 Response regulator receiver domain THII_RS20875 PF01627 Hpt domain THII_RS20875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THII_RS20875 PF00497 Bacterial extracellular solute-binding proteins, family 3 THII_RS20875 PF00512 His Kinase A (phospho-acceptor) domain THII_RS20885 PF10411 Disulfide bond isomerase protein N-terminus THII_RS20885 PF13098 Thioredoxin-like domain THII_RS20890 PF03707 Bacterial signalling protein N terminal repeat THII_RS20890 PF00990 Diguanylate cyclase, GGDEF domain THII_RS20890 PF00563 EAL domain THII_RS20895 PF00691 OmpA family THII_RS20900 PF00672 HAMP domain THII_RS20900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THII_RS20900 PF02203 Tar ligand binding domain homologue