THII_RS00105	PWY-5667	CDP-diacylglycerol biosynthesis I
THII_RS00105	PWY-5981	CDP-diacylglycerol biosynthesis III
THII_RS00160	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
THII_RS00165	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THII_RS00175	PWY-7205	CMP phosphorylation
THII_RS00195	PWY-5686	UMP biosynthesis
THII_RS00295	PWY-3341	L-proline biosynthesis III
THII_RS00295	PWY-4981	L-proline biosynthesis II (from arginine)
THII_RS00295	PWY-6344	L-ornithine degradation II (Stickland reaction)
THII_RS00345	PWY-5686	UMP biosynthesis
THII_RS00350	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THII_RS00350	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THII_RS00385	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THII_RS00385	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THII_RS00485	PWY-2941	L-lysine biosynthesis II
THII_RS00485	PWY-2942	L-lysine biosynthesis III
THII_RS00485	PWY-5097	L-lysine biosynthesis VI
THII_RS00530	PWY-5057	L-valine degradation II
THII_RS00530	PWY-5076	L-leucine degradation III
THII_RS00530	PWY-5078	L-isoleucine degradation II
THII_RS00530	PWY-5101	L-isoleucine biosynthesis II
THII_RS00530	PWY-5103	L-isoleucine biosynthesis III
THII_RS00530	PWY-5104	L-isoleucine biosynthesis IV
THII_RS00530	PWY-5108	L-isoleucine biosynthesis V
THII_RS00575	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THII_RS00575	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THII_RS00575	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
THII_RS00630	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THII_RS00630	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THII_RS00630	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THII_RS00780	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THII_RS00780	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THII_RS00925	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS00940	PWY-2722	trehalose degradation IV
THII_RS00940	PWY-2723	trehalose degradation V
THII_RS00940	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THII_RS00940	PWY-5661	GDP-glucose biosynthesis
THII_RS00940	PWY-621	sucrose degradation III (sucrose invertase)
THII_RS00940	PWY-7238	sucrose biosynthesis II
THII_RS00940	PWY-7385	1,3-propanediol biosynthesis (engineered)
THII_RS01005	PWY-2941	L-lysine biosynthesis II
THII_RS01005	PWY-2942	L-lysine biosynthesis III
THII_RS01005	PWY-5097	L-lysine biosynthesis VI
THII_RS01005	PWY-6559	spermidine biosynthesis II
THII_RS01005	PWY-6562	norspermidine biosynthesis
THII_RS01005	PWY-7153	grixazone biosynthesis
THII_RS01065	PWY-2941	L-lysine biosynthesis II
THII_RS01065	PWY-5097	L-lysine biosynthesis VI
THII_RS01090	PWY-5484	glycolysis II (from fructose 6-phosphate)
THII_RS01095	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THII_RS01095	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THII_RS01095	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THII_RS01095	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THII_RS01095	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS01095	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS01095	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THII_RS01095	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THII_RS01100	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THII_RS01100	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THII_RS01100	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THII_RS01100	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THII_RS01100	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS01100	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS01100	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THII_RS01100	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THII_RS01105	PWY-4381	fatty acid biosynthesis initiation I
THII_RS01105	PWY-5743	3-hydroxypropanoate cycle
THII_RS01105	PWY-5744	glyoxylate assimilation
THII_RS01105	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THII_RS01105	PWY-6679	jadomycin biosynthesis
THII_RS01105	PWY-6722	candicidin biosynthesis
THII_RS01105	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THII_RS01295	PWY-5941	glycogen degradation II (eukaryotic)
THII_RS01295	PWY-6731	starch degradation III
THII_RS01295	PWY-6737	starch degradation V
THII_RS01295	PWY-7238	sucrose biosynthesis II
THII_RS01300	PWY-381	nitrate reduction II (assimilatory)
THII_RS01300	PWY-5675	nitrate reduction V (assimilatory)
THII_RS01300	PWY-6549	L-glutamine biosynthesis III
THII_RS01300	PWY-6963	ammonia assimilation cycle I
THII_RS01300	PWY-6964	ammonia assimilation cycle II
THII_RS01315	PWY-6825	phosphatidylcholine biosynthesis V
THII_RS01435	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
THII_RS01435	PWY-5739	GDP-D-perosamine biosynthesis
THII_RS01435	PWY-5740	GDP-L-colitose biosynthesis
THII_RS01435	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
THII_RS01435	PWY-7573	GDP-mycosamine biosynthesis
THII_RS01440	PWY-5481	pyruvate fermentation to lactate
THII_RS01440	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
THII_RS01440	PWY-6901	superpathway of glucose and xylose degradation
THII_RS01695	PWY-3781	aerobic respiration I (cytochrome c)
THII_RS01695	PWY-4521	arsenite oxidation I (respiratory)
THII_RS01695	PWY-6692	Fe(II) oxidation
THII_RS01695	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THII_RS01775	PWY-43	putrescine biosynthesis II
THII_RS01785	PWY-43	putrescine biosynthesis II
THII_RS01810	PWY-7560	methylerythritol phosphate pathway II
THII_RS01815	PWY-7560	methylerythritol phosphate pathway II
THII_RS01850	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THII_RS01850	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THII_RS01915	PWY-1042	glycolysis IV (plant cytosol)
THII_RS01915	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THII_RS01915	PWY-5484	glycolysis II (from fructose 6-phosphate)
THII_RS01915	PWY-7385	1,3-propanediol biosynthesis (engineered)
THII_RS01980	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THII_RS01980	PWY-6148	tetrahydromethanopterin biosynthesis
THII_RS01980	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THII_RS01980	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THII_RS01985	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THII_RS01985	PWY-6148	tetrahydromethanopterin biosynthesis
THII_RS01985	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THII_RS01985	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THII_RS02120	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
THII_RS02120	PWY-2201	folate transformations I
THII_RS02120	PWY-3841	folate transformations II
THII_RS02120	PWY-5030	L-histidine degradation III
THII_RS02120	PWY-5497	purine nucleobases degradation II (anaerobic)
THII_RS02120	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
THII_RS02170	PWY-3781	aerobic respiration I (cytochrome c)
THII_RS02170	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THII_RS02170	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THII_RS02170	PWY-5690	TCA cycle II (plants and fungi)
THII_RS02170	PWY-6728	methylaspartate cycle
THII_RS02170	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THII_RS02170	PWY-7254	TCA cycle VII (acetate-producers)
THII_RS02170	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THII_RS02175	PWY-3781	aerobic respiration I (cytochrome c)
THII_RS02175	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THII_RS02175	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THII_RS02175	PWY-5690	TCA cycle II (plants and fungi)
THII_RS02175	PWY-6728	methylaspartate cycle
THII_RS02175	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THII_RS02175	PWY-7254	TCA cycle VII (acetate-producers)
THII_RS02175	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THII_RS02190	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THII_RS02190	PWY-6855	chitin degradation I (archaea)
THII_RS02190	PWY-6906	chitin derivatives degradation
THII_RS02200	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THII_RS02320	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
THII_RS02320	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
THII_RS02320	PWY-7717	THII_RS02320
THII_RS02320	PWY-7733	THII_RS02320
THII_RS02320	PWY-7734	THII_RS02320
THII_RS02330	PWY-1281	sulfoacetaldehyde degradation I
THII_RS02330	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THII_RS02330	PWY-5482	pyruvate fermentation to acetate II
THII_RS02330	PWY-5485	pyruvate fermentation to acetate IV
THII_RS02330	PWY-5497	purine nucleobases degradation II (anaerobic)
THII_RS02330	PWY-6637	sulfolactate degradation II
THII_RS02330	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THII_RS02335	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS02585	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THII_RS02670	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THII_RS02675	PWY-6728	methylaspartate cycle
THII_RS02675	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THII_RS02675	PWY-7118	chitin degradation to ethanol
THII_RS02675	PWY-7294	xylose degradation IV
THII_RS02675	PWY-7295	L-arabinose degradation IV
THII_RS02695	PWY-5340	sulfate activation for sulfonation
THII_RS02790	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THII_RS02790	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THII_RS02810	PWY-5269	cardiolipin biosynthesis II
THII_RS02810	PWY-5668	cardiolipin biosynthesis I
THII_RS02875	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THII_RS02875	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THII_RS02875	PWY-5989	stearate biosynthesis II (bacteria and plants)
THII_RS02875	PWY-5994	palmitate biosynthesis I (animals and fungi)
THII_RS02875	PWY-6113	superpathway of mycolate biosynthesis
THII_RS02875	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THII_RS02875	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THII_RS02875	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THII_RS02875	PWY-7663	gondoate biosynthesis (anaerobic)
THII_RS02875	PWY-7664	oleate biosynthesis IV (anaerobic)
THII_RS02875	PWYG-321	mycolate biosynthesis
THII_RS02915	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
THII_RS02950	PWY-2161	folate polyglutamylation
THII_RS02955	PWY-1622	formaldehyde assimilation I (serine pathway)
THII_RS02955	PWY-181	photorespiration
THII_RS02955	PWY-2161	folate polyglutamylation
THII_RS02955	PWY-2201	folate transformations I
THII_RS02955	PWY-3661	glycine betaine degradation I
THII_RS02955	PWY-3661-1	glycine betaine degradation II (mammalian)
THII_RS02955	PWY-3841	folate transformations II
THII_RS02955	PWY-5497	purine nucleobases degradation II (anaerobic)
THII_RS02960	PWY-5525	D-glucuronate degradation I
THII_RS03005	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THII_RS03030	PWY-6683	sulfate reduction III (assimilatory)
THII_RS03035	PWY-5306	superpathway of thiosulfate metabolism (<i>Desulfovibrio sulfodismutans</i>)
THII_RS03035	PWY-5360	superpathway of tetrathionate reduction (<i>Salmonella typhimurium</i>)
THII_RS03035	PWY-6683	sulfate reduction III (assimilatory)
THII_RS03170	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
THII_RS03175	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THII_RS03175	PWY-622	starch biosynthesis
THII_RS03210	PWY-5686	UMP biosynthesis
THII_RS03215	PWY-5686	UMP biosynthesis
THII_RS03305	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
THII_RS03305	PWY-5368	dimorphecolate biosynthesis
THII_RS03305	PWY-5995	linoleate biosynthesis I (plants)
THII_RS03305	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
THII_RS03305	PWY-6803	phosphatidylcholine acyl editing
THII_RS03305	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
THII_RS03305	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
THII_RS03305	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
THII_RS03305	PWY-7470	phosphatidylcholine biosynthesis VII
THII_RS03305	PWY-7618	ricinoleate biosynthesis
THII_RS03315	PWY-181	photorespiration
THII_RS03320	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
THII_RS03320	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
THII_RS03320	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
THII_RS03320	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
THII_RS03320	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
THII_RS03320	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
THII_RS03320	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
THII_RS03320	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
THII_RS03320	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
THII_RS03320	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
THII_RS03500	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THII_RS03500	PWY-5686	UMP biosynthesis
THII_RS03500	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THII_RS03505	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THII_RS03505	PWY-5686	UMP biosynthesis
THII_RS03505	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THII_RS03525	PWY-4981	L-proline biosynthesis II (from arginine)
THII_RS03525	PWY-4984	urea cycle
THII_RS03525	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THII_RS03575	PWY-3841	folate transformations II
THII_RS03575	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THII_RS03575	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS03575	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THII_RS03575	PWY-7199	pyrimidine deoxyribonucleosides salvage
THII_RS03575	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THII_RS03590	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THII_RS03700	PWY-6825	phosphatidylcholine biosynthesis V
THII_RS03735	PWY-4983	L-citrulline-nitric oxide cycle
THII_RS03735	PWY-4984	urea cycle
THII_RS03735	PWY-5	canavanine biosynthesis
THII_RS03735	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THII_RS03735	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THII_RS03795	PWY-6703	preQ<sub>0</sub> biosynthesis
THII_RS03825	PWY-5723	Rubisco shunt
THII_RS03895	PWY-1042	glycolysis IV (plant cytosol)
THII_RS03895	PWY-5484	glycolysis II (from fructose 6-phosphate)
THII_RS03895	PWY-6901	superpathway of glucose and xylose degradation
THII_RS03895	PWY-7003	glycerol degradation to butanol
THII_RS03900	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THII_RS03900	PWY-5723	Rubisco shunt
THII_RS03900	PWY-6891	thiazole biosynthesis II (Bacillus)
THII_RS03900	PWY-6892	thiazole biosynthesis I (E. coli)
THII_RS03900	PWY-6901	superpathway of glucose and xylose degradation
THII_RS03900	PWY-7560	methylerythritol phosphate pathway II
THII_RS03945	PWY-7294	xylose degradation IV
THII_RS03945	PWY-7295	L-arabinose degradation IV
THII_RS04160	PWY-5676	acetyl-CoA fermentation to butanoate II
THII_RS04160	PWY-5741	ethylmalonyl-CoA pathway
THII_RS04160	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
THII_RS04240	PWY-3781	aerobic respiration I (cytochrome c)
THII_RS04240	PWY-6692	Fe(II) oxidation
THII_RS04240	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
THII_RS04240	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THII_RS04280	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THII_RS04280	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THII_RS04280	PWY-5989	stearate biosynthesis II (bacteria and plants)
THII_RS04280	PWY-6113	superpathway of mycolate biosynthesis
THII_RS04280	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THII_RS04280	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THII_RS04280	PWY-7663	gondoate biosynthesis (anaerobic)
THII_RS04280	PWY-7664	oleate biosynthesis IV (anaerobic)
THII_RS04280	PWYG-321	mycolate biosynthesis
THII_RS04285	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THII_RS04285	PWY-5723	Rubisco shunt
THII_RS04320	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS04425	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THII_RS04485	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THII_RS04485	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THII_RS04560	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
THII_RS04610	PWY-6703	preQ<sub>0</sub> biosynthesis
THII_RS04625	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THII_RS04640	PWY-5669	phosphatidylethanolamine biosynthesis I
THII_RS04700	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THII_RS04745	PWY-5316	nicotine biosynthesis
THII_RS04745	PWY-7342	superpathway of nicotine biosynthesis
THII_RS04835	PWY-6700	queuosine biosynthesis
THII_RS04845	PWY-5194	siroheme biosynthesis
THII_RS04845	PWY-5441	S-methyl-L-methionine cycle
THII_RS04845	PWY-702	L-methionine biosynthesis II
THII_RS04845	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
THII_RS05090	PWY-7396	butanol and isobutanol biosynthesis (engineered)
THII_RS05095	PWY-2941	L-lysine biosynthesis II
THII_RS05095	PWY-2942	L-lysine biosynthesis III
THII_RS05095	PWY-5097	L-lysine biosynthesis VI
THII_RS05095	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THII_RS05095	PWY-6559	spermidine biosynthesis II
THII_RS05095	PWY-6562	norspermidine biosynthesis
THII_RS05095	PWY-7153	grixazone biosynthesis
THII_RS05095	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THII_RS05120	PWY-6123	inosine-5'-phosphate biosynthesis I
THII_RS05120	PWY-7234	inosine-5'-phosphate biosynthesis III
THII_RS05205	PWY-5278	sulfite oxidation III
THII_RS05205	PWY-5340	sulfate activation for sulfonation
THII_RS05205	PWY-6683	sulfate reduction III (assimilatory)
THII_RS05205	PWY-6932	selenate reduction
THII_RS05405	PWY-5392	reductive TCA cycle II
THII_RS05405	PWY-5537	pyruvate fermentation to acetate V
THII_RS05405	PWY-5538	pyruvate fermentation to acetate VI
THII_RS05405	PWY-5690	TCA cycle II (plants and fungi)
THII_RS05405	PWY-5913	TCA cycle VI (obligate autotrophs)
THII_RS05405	PWY-6728	methylaspartate cycle
THII_RS05405	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THII_RS05405	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THII_RS05425	PWY-2201	folate transformations I
THII_RS05565	PWY-3801	sucrose degradation II (sucrose synthase)
THII_RS05565	PWY-6527	stachyose degradation
THII_RS05565	PWY-7238	sucrose biosynthesis II
THII_RS05565	PWY-7343	UDP-glucose biosynthesis
THII_RS05865	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THII_RS05865	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THII_RS05865	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THII_RS05870	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THII_RS05870	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THII_RS05885	PWY-2201	folate transformations I
THII_RS05940	PWY-6936	seleno-amino acid biosynthesis
THII_RS05980	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS06010	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THII_RS06010	PWY-622	starch biosynthesis
THII_RS06080	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THII_RS06080	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THII_RS06120	PWY-6700	queuosine biosynthesis
THII_RS06160	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THII_RS06160	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THII_RS06220	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
THII_RS06220	PWY-5368	dimorphecolate biosynthesis
THII_RS06220	PWY-5995	linoleate biosynthesis I (plants)
THII_RS06220	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
THII_RS06220	PWY-6803	phosphatidylcholine acyl editing
THII_RS06220	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
THII_RS06220	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
THII_RS06220	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
THII_RS06220	PWY-7470	phosphatidylcholine biosynthesis VII
THII_RS06220	PWY-7618	ricinoleate biosynthesis
THII_RS06250	PWY-3821	galactose degradation III
THII_RS06250	PWY-6317	galactose degradation I (Leloir pathway)
THII_RS06250	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
THII_RS06250	PWY-6527	stachyose degradation
THII_RS06250	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
THII_RS06250	PWY-7344	UDP-D-galactose biosynthesis
THII_RS06255	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
THII_RS06265	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THII_RS06265	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THII_RS06280	PWY-1281	sulfoacetaldehyde degradation I
THII_RS06280	PWY-5482	pyruvate fermentation to acetate II
THII_RS06280	PWY-5485	pyruvate fermentation to acetate IV
THII_RS06280	PWY-5497	purine nucleobases degradation II (anaerobic)
THII_RS06280	PWY-6637	sulfolactate degradation II
THII_RS06355	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THII_RS06355	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THII_RS06355	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THII_RS06355	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
THII_RS06425	PWY-6749	CMP-legionaminate biosynthesis I
THII_RS06430	PWY-6749	CMP-legionaminate biosynthesis I
THII_RS06460	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
THII_RS06460	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
THII_RS06525	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
THII_RS06605	PWY-3221	dTDP-L-rhamnose biosynthesis II
THII_RS06605	PWY-6808	dTDP-D-forosamine biosynthesis
THII_RS06605	PWY-6942	dTDP-D-desosamine biosynthesis
THII_RS06605	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
THII_RS06605	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
THII_RS06605	PWY-6974	dTDP-L-olivose biosynthesis
THII_RS06605	PWY-6976	dTDP-L-mycarose biosynthesis
THII_RS06605	PWY-7104	dTDP-L-megosamine biosynthesis
THII_RS06605	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
THII_RS06605	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
THII_RS06605	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
THII_RS06605	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
THII_RS06605	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
THII_RS06605	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
THII_RS06605	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
THII_RS06605	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
THII_RS06605	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
THII_RS06605	PWY-7688	THII_RS06605
THII_RS06610	PWY-3221	dTDP-L-rhamnose biosynthesis II
THII_RS06610	PWY-6808	dTDP-D-forosamine biosynthesis
THII_RS06610	PWY-6942	dTDP-D-desosamine biosynthesis
THII_RS06610	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
THII_RS06610	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
THII_RS06610	PWY-6974	dTDP-L-olivose biosynthesis
THII_RS06610	PWY-6976	dTDP-L-mycarose biosynthesis
THII_RS06610	PWY-7104	dTDP-L-megosamine biosynthesis
THII_RS06610	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
THII_RS06610	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
THII_RS06610	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
THII_RS06610	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
THII_RS06610	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
THII_RS06610	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
THII_RS06610	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
THII_RS06610	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
THII_RS06610	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
THII_RS06610	PWY-7688	THII_RS06610
THII_RS06765	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THII_RS06770	PWY-6502	oxidized GTP and dGTP detoxification
THII_RS06770	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THII_RS06770	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THII_RS06770	PWY-6897	thiamin salvage II
THII_RS06770	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
THII_RS06770	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
THII_RS06770	PWY-7356	thiamin salvage IV (yeast)
THII_RS06770	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THII_RS06845	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THII_RS06845	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
THII_RS06845	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THII_RS06845	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS06845	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
THII_RS06845	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
THII_RS06845	PWY-7205	CMP phosphorylation
THII_RS06845	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
THII_RS06845	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS06845	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS06845	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS06845	PWY-7224	purine deoxyribonucleosides salvage
THII_RS06845	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
THII_RS06845	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
THII_RS06850	PWY-2201	folate transformations I
THII_RS07010	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THII_RS07010	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THII_RS07010	PWY-6896	thiamin salvage I
THII_RS07010	PWY-6897	thiamin salvage II
THII_RS07065	PWY-3801	sucrose degradation II (sucrose synthase)
THII_RS07065	PWY-5054	sorbitol biosynthesis I
THII_RS07065	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
THII_RS07065	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THII_RS07065	PWY-5659	GDP-mannose biosynthesis
THII_RS07065	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THII_RS07065	PWY-621	sucrose degradation III (sucrose invertase)
THII_RS07065	PWY-622	starch biosynthesis
THII_RS07065	PWY-6981	chitin biosynthesis
THII_RS07065	PWY-6992	1,5-anhydrofructose degradation
THII_RS07065	PWY-7238	sucrose biosynthesis II
THII_RS07065	PWY-7347	sucrose biosynthesis III
THII_RS07065	PWY-7385	1,3-propanediol biosynthesis (engineered)
THII_RS07070	PWY-5941	glycogen degradation II (eukaryotic)
THII_RS07070	PWY-6724	starch degradation II
THII_RS07070	PWY-6737	starch degradation V
THII_RS07070	PWY-7238	sucrose biosynthesis II
THII_RS07080	PWY-622	starch biosynthesis
THII_RS07185	PWY-6891	thiazole biosynthesis II (Bacillus)
THII_RS07185	PWY-6892	thiazole biosynthesis I (E. coli)
THII_RS07185	PWY-7560	methylerythritol phosphate pathway II
THII_RS07190	PWY-5663	tetrahydrobiopterin biosynthesis I
THII_RS07190	PWY-5664	tetrahydrobiopterin biosynthesis II
THII_RS07190	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THII_RS07190	PWY-6703	preQ<sub>0</sub> biosynthesis
THII_RS07190	PWY-6983	tetrahydrobiopterin biosynthesis III
THII_RS07190	PWY-7442	drosopterin and aurodrosopterin biosynthesis
THII_RS07225	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THII_RS07225	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
THII_RS07230	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
THII_RS07230	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
THII_RS07320	PWY-5839	menaquinol-7 biosynthesis
THII_RS07320	PWY-5851	demethylmenaquinol-9 biosynthesis
THII_RS07320	PWY-5852	demethylmenaquinol-8 biosynthesis I
THII_RS07320	PWY-5853	demethylmenaquinol-6 biosynthesis I
THII_RS07320	PWY-5890	menaquinol-10 biosynthesis
THII_RS07320	PWY-5891	menaquinol-11 biosynthesis
THII_RS07320	PWY-5892	menaquinol-12 biosynthesis
THII_RS07320	PWY-5895	menaquinol-13 biosynthesis
THII_RS07335	PWY-5344	L-homocysteine biosynthesis
THII_RS07335	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
THII_RS07450	PWY-5692	allantoin degradation to glyoxylate II
THII_RS07450	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
THII_RS07485	PWY-5382	hydrogen oxidation II (aerobic, NAD)
THII_RS07485	PWY-6758	hydrogen production II
THII_RS07530	PWY-5674	nitrate reduction IV (dissimilatory)
THII_RS07565	PWY-6655	xanthan biosynthesis
THII_RS07565	PWY-6658	acetan biosynthesis
THII_RS07605	PWY-5941	glycogen degradation II (eukaryotic)
THII_RS07605	PWY-6731	starch degradation III
THII_RS07605	PWY-6737	starch degradation V
THII_RS07605	PWY-7238	sucrose biosynthesis II
THII_RS07640	PWY-6672	<i>cis</i>-genanyl-CoA degradation
THII_RS07640	PWY-7118	chitin degradation to ethanol
THII_RS07680	PWY-6654	phosphopantothenate biosynthesis III
THII_RS07685	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
THII_RS07685	PWY-6148	tetrahydromethanopterin biosynthesis
THII_RS07685	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
THII_RS07685	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THII_RS07700	PWY-6936	seleno-amino acid biosynthesis
THII_RS07700	PWY-7274	D-cycloserine biosynthesis
THII_RS07710	PWY-6823	molybdenum cofactor biosynthesis
THII_RS07840	PWY-5839	menaquinol-7 biosynthesis
THII_RS07840	PWY-5844	menaquinol-9 biosynthesis
THII_RS07840	PWY-5849	menaquinol-6 biosynthesis
THII_RS07840	PWY-5890	menaquinol-10 biosynthesis
THII_RS07840	PWY-5891	menaquinol-11 biosynthesis
THII_RS07840	PWY-5892	menaquinol-12 biosynthesis
THII_RS07840	PWY-5895	menaquinol-13 biosynthesis
THII_RS07860	PWY-702	L-methionine biosynthesis II
THII_RS07935	PWY-3781	aerobic respiration I (cytochrome c)
THII_RS07935	PWY-4521	arsenite oxidation I (respiratory)
THII_RS07935	PWY-6692	Fe(II) oxidation
THII_RS07935	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THII_RS07940	PWY-3781	aerobic respiration I (cytochrome c)
THII_RS07940	PWY-4521	arsenite oxidation I (respiratory)
THII_RS07940	PWY-6692	Fe(II) oxidation
THII_RS07940	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THII_RS08025	PWY-6123	inosine-5'-phosphate biosynthesis I
THII_RS08025	PWY-6124	inosine-5'-phosphate biosynthesis II
THII_RS08025	PWY-7234	inosine-5'-phosphate biosynthesis III
THII_RS08090	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THII_RS08090	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THII_RS08100	PWY-3821	galactose degradation III
THII_RS08100	PWY-6317	galactose degradation I (Leloir pathway)
THII_RS08100	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
THII_RS08100	PWY-6527	stachyose degradation
THII_RS08100	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
THII_RS08100	PWY-7344	UDP-D-galactose biosynthesis
THII_RS08300	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
THII_RS08320	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
THII_RS08320	PWY-5940	streptomycin biosynthesis
THII_RS08325	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
THII_RS08420	PWY-5381	pyridine nucleotide cycling (plants)
THII_RS08420	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THII_RS08420	PWY-6596	adenosine nucleotides degradation I
THII_RS08420	PWY-6606	guanosine nucleotides degradation II
THII_RS08420	PWY-6607	guanosine nucleotides degradation I
THII_RS08420	PWY-6608	guanosine nucleotides degradation III
THII_RS08420	PWY-7185	UTP and CTP dephosphorylation I
THII_RS08510	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THII_RS08510	PWY-622	starch biosynthesis
THII_RS08520	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THII_RS08520	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THII_RS08520	PWY-5989	stearate biosynthesis II (bacteria and plants)
THII_RS08520	PWY-5994	palmitate biosynthesis I (animals and fungi)
THII_RS08520	PWY-6113	superpathway of mycolate biosynthesis
THII_RS08520	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THII_RS08520	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THII_RS08520	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THII_RS08520	PWY-7663	gondoate biosynthesis (anaerobic)
THII_RS08520	PWY-7664	oleate biosynthesis IV (anaerobic)
THII_RS08520	PWYG-321	mycolate biosynthesis
THII_RS08545	PWY-7294	xylose degradation IV
THII_RS08545	PWY-7295	L-arabinose degradation IV
THII_RS08545	PWY-7560	methylerythritol phosphate pathway II
THII_RS08550	PWY-5667	CDP-diacylglycerol biosynthesis I
THII_RS08550	PWY-5981	CDP-diacylglycerol biosynthesis III
THII_RS08595	PWY-6823	molybdenum cofactor biosynthesis
THII_RS08610	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
THII_RS08660	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
THII_RS08660	PWY-5667	CDP-diacylglycerol biosynthesis I
THII_RS08660	PWY-6453	stigma estolide biosynthesis
THII_RS08660	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
THII_RS08660	PWY-7587	oleate biosynthesis III (cyanobacteria)
THII_RS08700	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
THII_RS08700	PWY-6167	flavin biosynthesis II (archaea)
THII_RS08700	PWY-6168	flavin biosynthesis III (fungi)
THII_RS08745	PWY-6683	sulfate reduction III (assimilatory)
THII_RS09025	PWY-6700	queuosine biosynthesis
THII_RS09045	PWY-5269	cardiolipin biosynthesis II
THII_RS09045	PWY-5668	cardiolipin biosynthesis I
THII_RS09150	PWY-5747	2-methylcitrate cycle II
THII_RS09205	PWY-6891	thiazole biosynthesis II (Bacillus)
THII_RS09205	PWY-6892	thiazole biosynthesis I (E. coli)
THII_RS09205	PWY-7560	methylerythritol phosphate pathway II
THII_RS09215	PWY-5532	adenosine nucleotides degradation IV
THII_RS09215	PWY-5723	Rubisco shunt
THII_RS09225	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THII_RS09245	PWY-6654	phosphopantothenate biosynthesis III
THII_RS09280	PWY-5964	guanylyl molybdenum cofactor biosynthesis
THII_RS09280	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
THII_RS09285	PWY-6832	2-aminoethylphosphonate degradation II
THII_RS09365	PWY-6825	phosphatidylcholine biosynthesis V
THII_RS09390	PWY-2941	L-lysine biosynthesis II
THII_RS09390	PWY-2942	L-lysine biosynthesis III
THII_RS09390	PWY-5097	L-lysine biosynthesis VI
THII_RS09445	PWY-5686	UMP biosynthesis
THII_RS09460	PWY-1001	cellulose biosynthesis
THII_RS09460	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THII_RS09460	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THII_RS09460	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THII_RS09460	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THII_RS09670	PWY-7294	xylose degradation IV
THII_RS09670	PWY-7295	L-arabinose degradation IV
THII_RS09745	PWY-5958	acridone alkaloid biosynthesis
THII_RS09745	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THII_RS09745	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THII_RS10140	PWY-6004	glycine betaine biosynthesis V (from glycine)
THII_RS10310	PWY-3341	L-proline biosynthesis III
THII_RS10310	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THII_RS10445	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THII_RS10445	PWY-622	starch biosynthesis
THII_RS10460	PWY-2301	<i>myo</i>-inositol biosynthesis
THII_RS10460	PWY-4702	phytate degradation I
THII_RS10460	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
THII_RS10555	PWY-3341	L-proline biosynthesis III
THII_RS10555	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
THII_RS10565	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
THII_RS10565	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
THII_RS10565	PWY-7622	UDP-galactofuranose biosynthesis
THII_RS10620	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THII_RS10620	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THII_RS10620	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THII_RS10620	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THII_RS10690	PWY-7731	THII_RS10690
THII_RS10710	PWY-6012	acyl carrier protein metabolism I
THII_RS10710	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
THII_RS10715	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
THII_RS10875	PWY-1361	benzoyl-CoA degradation I (aerobic)
THII_RS10875	PWY-5109	2-methylbutanoate biosynthesis
THII_RS10875	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
THII_RS10875	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
THII_RS10875	PWY-5177	glutaryl-CoA degradation
THII_RS10875	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THII_RS10875	PWY-6435	4-hydroxybenzoate biosynthesis V
THII_RS10875	PWY-6583	pyruvate fermentation to butanol I
THII_RS10875	PWY-6863	pyruvate fermentation to hexanol
THII_RS10875	PWY-6883	pyruvate fermentation to butanol II
THII_RS10875	PWY-6944	androstenedione degradation
THII_RS10875	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
THII_RS10875	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
THII_RS10875	PWY-7007	methyl ketone biosynthesis
THII_RS10875	PWY-7046	4-coumarate degradation (anaerobic)
THII_RS10875	PWY-7094	fatty acid salvage
THII_RS10875	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
THII_RS10875	PWY-735	jasmonic acid biosynthesis
THII_RS10875	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
THII_RS10875	PWY-7606	docosahexaenoate biosynthesis III (mammals)
THII_RS10875	PWY-7726	THII_RS10875
THII_RS10930	PWY-4381	fatty acid biosynthesis initiation I
THII_RS10930	PWY-6799	fatty acid biosynthesis (plant mitochondria)
THII_RS10930	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THII_RS10955	PWY-6174	mevalonate pathway II (archaea)
THII_RS10955	PWY-7391	isoprene biosynthesis II (engineered)
THII_RS10955	PWY-7524	mevalonate pathway III (archaea)
THII_RS10955	PWY-7571	ferrichrome A biosynthesis
THII_RS10955	PWY-922	mevalonate pathway I
THII_RS11135	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
THII_RS11315	PWY-5958	acridone alkaloid biosynthesis
THII_RS11315	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THII_RS11315	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THII_RS11380	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
THII_RS11400	PWY-7560	methylerythritol phosphate pathway II
THII_RS11425	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
THII_RS11425	PWY-6596	adenosine nucleotides degradation I
THII_RS11425	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS11485	PWY-5669	phosphatidylethanolamine biosynthesis I
THII_RS11490	PWY-5103	L-isoleucine biosynthesis III
THII_RS11490	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THII_RS11510	PWY-5101	L-isoleucine biosynthesis II
THII_RS11510	PWY-5103	L-isoleucine biosynthesis III
THII_RS11510	PWY-5104	L-isoleucine biosynthesis IV
THII_RS11510	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THII_RS11510	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THII_RS11510	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THII_RS11510	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THII_RS11515	PWY-5101	L-isoleucine biosynthesis II
THII_RS11515	PWY-5103	L-isoleucine biosynthesis III
THII_RS11515	PWY-5104	L-isoleucine biosynthesis IV
THII_RS11515	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
THII_RS11515	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THII_RS11515	PWY-6389	(<i>S</i>)-acetoin biosynthesis
THII_RS11515	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THII_RS11550	PWY-5381	pyridine nucleotide cycling (plants)
THII_RS11570	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
THII_RS11570	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
THII_RS11570	PWY-6897	thiamin salvage II
THII_RS11570	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
THII_RS11570	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
THII_RS11570	PWY-7356	thiamin salvage IV (yeast)
THII_RS11570	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
THII_RS11575	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
THII_RS11575	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
THII_RS11575	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
THII_RS11575	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
THII_RS11575	PWY-6978	plastoquinol-9 biosynthesis II
THII_RS11620	PWY-5316	nicotine biosynthesis
THII_RS11620	PWY-5381	pyridine nucleotide cycling (plants)
THII_RS11620	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THII_RS11620	PWY-7342	superpathway of nicotine biosynthesis
THII_RS11805	PWY-2781	<i>cis</i>-zeatin biosynthesis
THII_RS11840	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS11895	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
THII_RS11985	PWY-5101	L-isoleucine biosynthesis II
THII_RS11985	PWY-5103	L-isoleucine biosynthesis III
THII_RS11985	PWY-5104	L-isoleucine biosynthesis IV
THII_RS11985	PWY-7111	pyruvate fermentation to isobutanol (engineered)
THII_RS12170	PWY-4702	phytate degradation I
THII_RS12300	PWY-5316	nicotine biosynthesis
THII_RS12300	PWY-7342	superpathway of nicotine biosynthesis
THII_RS12515	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THII_RS12515	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THII_RS12520	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THII_RS12520	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
THII_RS12520	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THII_RS12520	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THII_RS12525	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THII_RS12525	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THII_RS12530	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THII_RS12530	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THII_RS12535	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
THII_RS12535	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
THII_RS12555	PWY-2201	folate transformations I
THII_RS12555	PWY-5497	purine nucleobases degradation II (anaerobic)
THII_RS12585	PWY-6936	seleno-amino acid biosynthesis
THII_RS12585	PWY-7274	D-cycloserine biosynthesis
THII_RS12625	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
THII_RS12750	PWY-6825	phosphatidylcholine biosynthesis V
THII_RS12845	PWY-4381	fatty acid biosynthesis initiation I
THII_RS12845	PWY-5743	3-hydroxypropanoate cycle
THII_RS12845	PWY-5744	glyoxylate assimilation
THII_RS12845	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
THII_RS12845	PWY-6679	jadomycin biosynthesis
THII_RS12845	PWY-6722	candicidin biosynthesis
THII_RS12845	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THII_RS12850	PWY-5667	CDP-diacylglycerol biosynthesis I
THII_RS12850	PWY-5981	CDP-diacylglycerol biosynthesis III
THII_RS12920	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS12965	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
THII_RS12965	PWY-6549	L-glutamine biosynthesis III
THII_RS12965	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THII_RS12965	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
THII_RS13035	PWY-6823	molybdenum cofactor biosynthesis
THII_RS13035	PWY-6891	thiazole biosynthesis II (Bacillus)
THII_RS13035	PWY-6892	thiazole biosynthesis I (E. coli)
THII_RS13035	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
THII_RS13265	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS13265	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS13265	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS13270	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS13270	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS13270	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS13275	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS13275	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS13275	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS13310	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
THII_RS13435	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THII_RS13435	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THII_RS13435	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
THII_RS13475	PWY-6823	molybdenum cofactor biosynthesis
THII_RS13640	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
THII_RS13640	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
THII_RS13640	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS13640	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
THII_RS13665	PWY-6167	flavin biosynthesis II (archaea)
THII_RS13665	PWY-6168	flavin biosynthesis III (fungi)
THII_RS13670	PWY-6167	flavin biosynthesis II (archaea)
THII_RS13670	PWY-6168	flavin biosynthesis III (fungi)
THII_RS13670	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
THII_RS13890	PWY-181	photorespiration
THII_RS13995	PWY-5941	glycogen degradation II (eukaryotic)
THII_RS13995	PWY-6724	starch degradation II
THII_RS13995	PWY-6737	starch degradation V
THII_RS13995	PWY-7238	sucrose biosynthesis II
THII_RS14075	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THII_RS14090	PWY-6749	CMP-legionaminate biosynthesis I
THII_RS14160	PWY-5482	pyruvate fermentation to acetate II
THII_RS14160	PWY-5485	pyruvate fermentation to acetate IV
THII_RS14160	PWY-5497	purine nucleobases degradation II (anaerobic)
THII_RS14405	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THII_RS14410	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
THII_RS14410	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
THII_RS14415	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
THII_RS14415	PWY-7177	UTP and CTP dephosphorylation II
THII_RS14415	PWY-7185	UTP and CTP dephosphorylation I
THII_RS14505	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS14520	PWY-6167	flavin biosynthesis II (archaea)
THII_RS14520	PWY-6168	flavin biosynthesis III (fungi)
THII_RS14520	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS14525	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS14575	PWY-3781	aerobic respiration I (cytochrome c)
THII_RS14575	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THII_RS14575	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
THII_RS14575	PWY-6692	Fe(II) oxidation
THII_RS14745	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THII_RS14960	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THII_RS14960	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THII_RS14960	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THII_RS15150	PWY-5659	GDP-mannose biosynthesis
THII_RS15150	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
THII_RS15265	PWY-5381	pyridine nucleotide cycling (plants)
THII_RS15265	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THII_RS15270	PWY-6891	thiazole biosynthesis II (Bacillus)
THII_RS15270	PWY-6892	thiazole biosynthesis I (E. coli)
THII_RS15305	PWY-3081	L-lysine biosynthesis V
THII_RS15305	PWY-6871	3-methylbutanol biosynthesis
THII_RS15305	PWY-7710	THII_RS15305
THII_RS15330	PWY-2201	folate transformations I
THII_RS15330	PWY-3841	folate transformations II
THII_RS15395	PWY-5278	sulfite oxidation III
THII_RS15395	PWY-5279	sulfite oxidation II
THII_RS15515	PWY-6823	molybdenum cofactor biosynthesis
THII_RS15625	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THII_RS15625	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
THII_RS15625	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THII_RS15690	PWY-6123	inosine-5'-phosphate biosynthesis I
THII_RS15690	PWY-6124	inosine-5'-phosphate biosynthesis II
THII_RS15690	PWY-7234	inosine-5'-phosphate biosynthesis III
THII_RS15750	PWY-5674	nitrate reduction IV (dissimilatory)
THII_RS15765	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THII_RS15775	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THII_RS15780	PWY-6854	ethylene biosynthesis III (microbes)
THII_RS15810	PWY-40	putrescine biosynthesis I
THII_RS15810	PWY-43	putrescine biosynthesis II
THII_RS15810	PWY-6305	putrescine biosynthesis IV
THII_RS15810	PWY-6834	spermidine biosynthesis III
THII_RS15850	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
THII_RS15850	PWY-622	starch biosynthesis
THII_RS15895	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
THII_RS15895	PWY-7688	THII_RS15895
THII_RS15945	PWY-5392	reductive TCA cycle II
THII_RS15945	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THII_RS15945	PWY-5690	TCA cycle II (plants and fungi)
THII_RS15945	PWY-5913	TCA cycle VI (obligate autotrophs)
THII_RS15945	PWY-6728	methylaspartate cycle
THII_RS15945	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THII_RS15945	PWY-7254	TCA cycle VII (acetate-producers)
THII_RS15945	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THII_RS15995	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THII_RS15995	PWY-6416	quinate degradation II
THII_RS15995	PWY-6707	gallate biosynthesis
THII_RS16040	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THII_RS16040	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THII_RS16125	PWY-5022	4-aminobutanoate degradation V
THII_RS16125	PWY-6728	methylaspartate cycle
THII_RS16125	PWY-7126	ethylene biosynthesis IV
THII_RS16300	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THII_RS16300	PWY-6164	3-dehydroquinate biosynthesis I
THII_RS16300	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THII_RS16310	PWY-5344	L-homocysteine biosynthesis
THII_RS16315	PWY-6004	glycine betaine biosynthesis V (from glycine)
THII_RS16370	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
THII_RS16370	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
THII_RS16370	PWY-6268	adenosylcobalamin salvage from cobalamin
THII_RS16370	PWY-6269	adenosylcobalamin salvage from cobinamide II
THII_RS16430	PWY-5532	adenosine nucleotides degradation IV
THII_RS16430	PWY-5723	Rubisco shunt
THII_RS16435	PWY-5532	adenosine nucleotides degradation IV
THII_RS16435	PWY-5723	Rubisco shunt
THII_RS16455	PWY-2201	folate transformations I
THII_RS16455	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THII_RS16565	PWY-1042	glycolysis IV (plant cytosol)
THII_RS16565	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THII_RS16565	PWY-5484	glycolysis II (from fructose 6-phosphate)
THII_RS16565	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THII_RS16565	PWY-7385	1,3-propanediol biosynthesis (engineered)
THII_RS16570	PWY-1042	glycolysis IV (plant cytosol)
THII_RS16570	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THII_RS16570	PWY-5484	glycolysis II (from fructose 6-phosphate)
THII_RS16570	PWY-5723	Rubisco shunt
THII_RS16570	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THII_RS16570	PWY-6886	1-butanol autotrophic biosynthesis
THII_RS16570	PWY-6901	superpathway of glucose and xylose degradation
THII_RS16570	PWY-7003	glycerol degradation to butanol
THII_RS16570	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THII_RS16570	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THII_RS16575	PWY-1042	glycolysis IV (plant cytosol)
THII_RS16575	PWY-5484	glycolysis II (from fructose 6-phosphate)
THII_RS16575	PWY-6886	1-butanol autotrophic biosynthesis
THII_RS16575	PWY-6901	superpathway of glucose and xylose degradation
THII_RS16575	PWY-7003	glycerol degradation to butanol
THII_RS16590	PWY-2201	folate transformations I
THII_RS16590	PWY-3841	folate transformations II
THII_RS16625	PWY-7255	ergothioneine biosynthesis I (bacteria)
THII_RS16680	PWY-5392	reductive TCA cycle II
THII_RS16680	PWY-5537	pyruvate fermentation to acetate V
THII_RS16680	PWY-5538	pyruvate fermentation to acetate VI
THII_RS16680	PWY-5690	TCA cycle II (plants and fungi)
THII_RS16680	PWY-5913	TCA cycle VI (obligate autotrophs)
THII_RS16680	PWY-6728	methylaspartate cycle
THII_RS16680	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THII_RS16680	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THII_RS16685	PWY-5392	reductive TCA cycle II
THII_RS16685	PWY-5537	pyruvate fermentation to acetate V
THII_RS16685	PWY-5538	pyruvate fermentation to acetate VI
THII_RS16685	PWY-5690	TCA cycle II (plants and fungi)
THII_RS16685	PWY-5913	TCA cycle VI (obligate autotrophs)
THII_RS16685	PWY-6728	methylaspartate cycle
THII_RS16685	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THII_RS16685	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
THII_RS16810	PWY-3461	L-tyrosine biosynthesis II
THII_RS16810	PWY-3462	L-phenylalanine biosynthesis II
THII_RS16810	PWY-6120	L-tyrosine biosynthesis III
THII_RS16810	PWY-6627	salinosporamide A biosynthesis
THII_RS16810	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
THII_RS16810	PWY-7626	bacilysin biosynthesis
THII_RS16815	PWY-2201	folate transformations I
THII_RS16885	PWY-1042	glycolysis IV (plant cytosol)
THII_RS16885	PWY-5484	glycolysis II (from fructose 6-phosphate)
THII_RS16885	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THII_RS16885	PWY-7003	glycerol degradation to butanol
THII_RS16925	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS16980	PWY-6164	3-dehydroquinate biosynthesis I
THII_RS16985	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THII_RS17060	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
THII_RS17085	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
THII_RS17085	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THII_RS17090	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THII_RS17095	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
THII_RS17100	PWY-1622	formaldehyde assimilation I (serine pathway)
THII_RS17100	PWY-5392	reductive TCA cycle II
THII_RS17100	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THII_RS17100	PWY-5690	TCA cycle II (plants and fungi)
THII_RS17100	PWY-5913	TCA cycle VI (obligate autotrophs)
THII_RS17100	PWY-6728	methylaspartate cycle
THII_RS17100	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THII_RS17100	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
THII_RS17100	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THII_RS17145	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
THII_RS17230	PWY-3841	folate transformations II
THII_RS17230	PWY-6614	tetrahydrofolate biosynthesis
THII_RS17270	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THII_RS17270	PWY-6578	8-amino-7-oxononanoate biosynthesis III
THII_RS17270	PWY-7147	8-amino-7-oxononanoate biosynthesis II
THII_RS17275	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
THII_RS17315	PWY-622	starch biosynthesis
THII_RS17335	PWY-622	starch biosynthesis
THII_RS17375	PWY-6891	thiazole biosynthesis II (Bacillus)
THII_RS17375	PWY-6892	thiazole biosynthesis I (E. coli)
THII_RS17375	PWY-7560	methylerythritol phosphate pathway II
THII_RS17380	PWY-6823	molybdenum cofactor biosynthesis
THII_RS17425	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
THII_RS17425	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
THII_RS17470	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
THII_RS17505	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
THII_RS17575	PWY-6123	inosine-5'-phosphate biosynthesis I
THII_RS17575	PWY-6124	inosine-5'-phosphate biosynthesis II
THII_RS17575	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS17575	PWY-7234	inosine-5'-phosphate biosynthesis III
THII_RS17680	PWY-6871	3-methylbutanol biosynthesis
THII_RS17730	PWY-5913	TCA cycle VI (obligate autotrophs)
THII_RS17730	PWY-6549	L-glutamine biosynthesis III
THII_RS17730	PWY-6728	methylaspartate cycle
THII_RS17730	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THII_RS17730	PWY-7124	ethylene biosynthesis V (engineered)
THII_RS17730	PWY-7254	TCA cycle VII (acetate-producers)
THII_RS17730	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
THII_RS17795	PWY-5367	petroselinate biosynthesis
THII_RS17795	PWY-5515	L-arabinose degradation II
THII_RS17795	PWY-5525	D-glucuronate degradation I
THII_RS17795	PWY-5971	palmitate biosynthesis II (bacteria and plants)
THII_RS17795	PWY-5973	<i>cis</i>-vaccenate biosynthesis
THII_RS17795	PWY-5989	stearate biosynthesis II (bacteria and plants)
THII_RS17795	PWY-5994	palmitate biosynthesis I (animals and fungi)
THII_RS17795	PWY-6113	superpathway of mycolate biosynthesis
THII_RS17795	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
THII_RS17795	PWY-6519	8-amino-7-oxononanoate biosynthesis I
THII_RS17795	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THII_RS17795	PWY-7663	gondoate biosynthesis (anaerobic)
THII_RS17795	PWY-7664	oleate biosynthesis IV (anaerobic)
THII_RS17795	PWYG-321	mycolate biosynthesis
THII_RS17800	PWY-4381	fatty acid biosynthesis initiation I
THII_RS17800	PWY-6799	fatty acid biosynthesis (plant mitochondria)
THII_RS17800	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
THII_RS17805	PWY-4381	fatty acid biosynthesis initiation I
THII_RS17915	PWY-6614	tetrahydrofolate biosynthesis
THII_RS18005	PWY-1042	glycolysis IV (plant cytosol)
THII_RS18005	PWY-1622	formaldehyde assimilation I (serine pathway)
THII_RS18005	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
THII_RS18005	PWY-5484	glycolysis II (from fructose 6-phosphate)
THII_RS18005	PWY-5723	Rubisco shunt
THII_RS18005	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
THII_RS18005	PWY-6886	1-butanol autotrophic biosynthesis
THII_RS18005	PWY-6901	superpathway of glucose and xylose degradation
THII_RS18005	PWY-7003	glycerol degradation to butanol
THII_RS18005	PWY-7124	ethylene biosynthesis V (engineered)
THII_RS18005	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
THII_RS18010	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
THII_RS18010	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
THII_RS18025	PWY-6749	CMP-legionaminate biosynthesis I
THII_RS18155	PWY-6938	NADH repair
THII_RS18345	PWY-5958	acridone alkaloid biosynthesis
THII_RS18345	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
THII_RS18345	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
THII_RS18350	PWY-181	photorespiration
THII_RS18355	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
THII_RS18355	PWY-5723	Rubisco shunt
THII_RS18420	PWY-2941	L-lysine biosynthesis II
THII_RS18420	PWY-2942	L-lysine biosynthesis III
THII_RS18420	PWY-5097	L-lysine biosynthesis VI
THII_RS18450	PWY-5686	UMP biosynthesis
THII_RS18460	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
THII_RS18460	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
THII_RS18515	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
THII_RS18540	PWY-6012	acyl carrier protein metabolism I
THII_RS18540	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
THII_RS18550	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THII_RS18550	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
THII_RS18735	PWY-1622	formaldehyde assimilation I (serine pathway)
THII_RS18735	PWY-5484	glycolysis II (from fructose 6-phosphate)
THII_RS18870	PWY-7158	L-phenylalanine degradation V
THII_RS18945	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THII_RS18945	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THII_RS19135	PWY-3781	aerobic respiration I (cytochrome c)
THII_RS19135	PWY-4302	aerobic respiration III (alternative oxidase pathway)
THII_RS19135	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
THII_RS19135	PWY-5690	TCA cycle II (plants and fungi)
THII_RS19135	PWY-6728	methylaspartate cycle
THII_RS19135	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
THII_RS19135	PWY-7254	TCA cycle VII (acetate-producers)
THII_RS19135	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
THII_RS19155	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
THII_RS19170	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
THII_RS19170	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
THII_RS19190	PWY-5155	&beta;-alanine biosynthesis III
THII_RS19210	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
THII_RS19250	PWY-6829	tRNA methylation (yeast)
THII_RS19250	PWY-7285	methylwyosine biosynthesis
THII_RS19250	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
THII_RS19330	PWY-6871	3-methylbutanol biosynthesis
THII_RS19345	PWY-6834	spermidine biosynthesis III
THII_RS19370	PWY-3961	phosphopantothenate biosynthesis II
THII_RS19380	PWY-5381	pyridine nucleotide cycling (plants)
THII_RS19380	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
THII_RS19535	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THII_RS19535	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
THII_RS19535	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
THII_RS19540	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
THII_RS19540	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
THII_RS19555	PWY-4983	L-citrulline-nitric oxide cycle
THII_RS19555	PWY-4984	urea cycle
THII_RS19555	PWY-5	canavanine biosynthesis
THII_RS19555	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
THII_RS19555	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
THII_RS19850	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
THII_RS19855	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
