THII_RS00005	PF00004	ATPase family associated with various cellular activities (AAA)
THII_RS00005	PF02861	Clp amino terminal domain
THII_RS00005	PF07724	AAA domain (Cdc48 subfamily)
THII_RS00005	PF10431	C-terminal, D2-small domain, of ClpB protein
THII_RS00010	PF01724	Domain of unknown function DUF29
THII_RS00035	PF03683	THII_RS00035
THII_RS00050	PF08012	THII_RS00050
THII_RS00055	PF07593	THII_RS00055
THII_RS00055	PF13517	Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
THII_RS00065	PF00109	Beta-ketoacyl synthase, N-terminal domain
THII_RS00065	PF00550	Phosphopantetheine attachment site
THII_RS00065	PF00698	Acyl transferase domain
THII_RS00065	PF02801	Beta-ketoacyl synthase, C-terminal domain
THII_RS00065	PF08659	KR domain
THII_RS00065	PF14765	Polyketide synthase dehydratase
THII_RS00065	PF16197	THII_RS00065
THII_RS00070	PF03160	Calx-beta domain
THII_RS00080	PF04754	THII_RS00080
THII_RS00080	PF14261	THII_RS00080
THII_RS00090	PF00932	Lamin Tail Domain
THII_RS00090	PF03372	Endonuclease/Exonuclease/phosphatase family
THII_RS00090	PF13205	Bacterial Ig-like domain
THII_RS00095	PF04389	Peptidase family M28
THII_RS00100	PF01066	CDP-alcohol phosphatidyltransferase
THII_RS00105	PF01148	Cytidylyltransferase family
THII_RS00110	PF01553	Acyltransferase
THII_RS00115	PF05685	Putative restriction endonuclease
THII_RS00120	PF11939	Protein of unknown function (DUF3457)
THII_RS00125	PF02613	Nitrate reductase delta subunit
THII_RS00130	PF03916	THII_RS00130
THII_RS00135	PF12800	4Fe-4S binding domain
THII_RS00135	PF13247	4Fe-4S dicluster domain
THII_RS00140	PF00384	Molybdopterin oxidoreductase
THII_RS00140	PF01568	Molydopterin dinucleotide binding domain
THII_RS00140	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
THII_RS00150	PF01409	tRNA synthetases class II core domain (F)
THII_RS00150	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
THII_RS00155	PF08238	Sel1 repeat
THII_RS00160	PF02153	Prephenate dehydrogenase
THII_RS00165	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
THII_RS00170	PF09723	THII_RS00170
THII_RS00175	PF02224	Cytidylate kinase
THII_RS00180	PF00575	S1 RNA binding domain
THII_RS00185	PF00216	Bacterial DNA-binding protein
THII_RS00190	PF13432	Tetratricopeptide repeat
THII_RS00195	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
THII_RS00200	PF13419	Haloacid dehalogenase-like hydrolase
THII_RS00210	PF02810	SEC-C motif
THII_RS00210	PF13424	Tetratricopeptide repeat
THII_RS00210	PF13844	Glycosyl transferase family 41
THII_RS00220	PF07412	Geminin
THII_RS00220	PF12844	Helix-turn-helix domain
THII_RS00225	PF01724	Domain of unknown function DUF29
THII_RS00235	PF01724	Domain of unknown function DUF29
THII_RS00240	PF00899	ThiF family
THII_RS00245	PF01026	TatD related DNase
THII_RS00250	PF13437	HlyD family secretion protein
THII_RS00250	PF13533	Biotin-lipoyl like
THII_RS00255	PF00072	Response regulator receiver domain
THII_RS00255	PF00563	EAL domain
THII_RS00255	PF00990	GGDEF domain
THII_RS00255	PF08448	PAS fold
THII_RS00270	PF05685	Putative restriction endonuclease
THII_RS00275	PF16363	THII_RS00275
THII_RS00280	PF00534	Glycosyl transferases group 1
THII_RS00285	PF01522	Polysaccharide deacetylase
THII_RS00290	PF02325	THII_RS00290
THII_RS00295	PF03807	NADP oxidoreductase coenzyme F420-dependent
THII_RS00295	PF14748	Pyrroline-5-carboxylate reductase dimerisation
THII_RS00305	PF13672	Protein phosphatase 2C
THII_RS00315	PF01103	Surface antigen
THII_RS00315	PF01734	Patatin-like phospholipase
THII_RS00320	PF05099	Tellurite resistance protein TerB
THII_RS00330	PF00085	Thioredoxin
THII_RS00330	PF14559	Tetratricopeptide repeat
THII_RS00330	PF14561	Tetratricopeptide repeat
THII_RS00335	PF01880	Desulfoferrodoxin
THII_RS00340	PF00929	Exonuclease
THII_RS00345	PF01979	Amidohydrolase family
THII_RS00350	PF00793	DAHP synthetase I family
THII_RS00355	PF00072	Response regulator receiver domain
THII_RS00355	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS00355	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS00355	PF00672	HAMP domain
THII_RS00355	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS00360	PF01103	Surface antigen
THII_RS00360	PF08479	POTRA domain, ShlB-type
THII_RS00365	PF01436	NHL repeat
THII_RS00375	PF08238	Sel1 repeat
THII_RS00380	PF08534	Redoxin
THII_RS00385	PF01293	Phosphoenolpyruvate carboxykinase
THII_RS00390	PF03050	THII_RS00390
THII_RS00400	PF13005	THII_RS00400
THII_RS00405	PF13358	DDE superfamily endonuclease
THII_RS00415	PF00535	Glycosyl transferase family 2
THII_RS00420	PF13358	DDE superfamily endonuclease
THII_RS00425	PF01710	Transposase
THII_RS00450	PF16260	THII_RS00450
THII_RS00460	PF01370	NAD dependent epimerase/dehydratase family
THII_RS00465	PF00294	pfkB family carbohydrate kinase
THII_RS00465	PF01467	Cytidylyltransferase
THII_RS00470	PF11306	Protein of unknown function (DUF3108)
THII_RS00475	PF06804	NlpB/DapX lipoprotein
THII_RS00485	PF00701	Dihydrodipicolinate synthetase family
THII_RS00495	PF01436	NHL repeat
THII_RS00495	PF01650	Peptidase C13 family
THII_RS00495	PF03160	Calx-beta domain
THII_RS00495	PF05345	Putative Ig domain
THII_RS00500	PF03169	THII_RS00500
THII_RS00510	PF02915	Rubrerythrin
THII_RS00515	PF03167	Uracil DNA glycosylase superfamily
THII_RS00520	PF04055	Radical SAM superfamily
THII_RS00520	PF06969	HemN C-terminal domain
THII_RS00530	PF01063	Aminotransferase class IV
THII_RS00535	PF10276	Zinc-finger domain
THII_RS00540	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
THII_RS00555	PF13386	THII_RS00555
THII_RS00560	PF02630	SCO1/SenC
THII_RS00570	PF04151	Bacterial pre-peptidase C-terminal domain
THII_RS00580	PF01145	SPFH domain / Band 7 family
THII_RS00595	PF06769	Plasmid encoded toxin Txe
THII_RS00600	PF01493	GXGXG motif
THII_RS00605	PF13847	Methyltransferase domain
THII_RS00610	PF05096	Glutamine cyclotransferase
THII_RS00620	PF04235	THII_RS00620
THII_RS00625	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
THII_RS00630	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
THII_RS00630	PF02843	Phosphoribosylglycinamide synthetase, C domain
THII_RS00630	PF02844	Phosphoribosylglycinamide synthetase, N domain
THII_RS00635	PF02594	Uncharacterised ACR, YggU family COG1872
THII_RS00645	PF01925	THII_RS00645
THII_RS00650	PF07726	ATPase family associated with various cellular activities (AAA)
THII_RS00655	PF14258	THII_RS00655
THII_RS00660	PF12770	THII_RS00660
THII_RS00660	PF13424	Tetratricopeptide repeat
THII_RS00695	PF00005	ABC transporter
THII_RS00700	PF02687	THII_RS00700
THII_RS00700	PF12704	MacB-like periplasmic core domain
THII_RS00705	PF17131	THII_RS00705
THII_RS00715	PF01588	Putative tRNA binding domain
THII_RS00715	PF08264	Anticodon-binding domain of tRNA
THII_RS00715	PF09334	tRNA synthetases class I (M)
THII_RS00720	PF13145	PPIC-type PPIASE domain
THII_RS00720	PF13616	PPIC-type PPIASE domain
THII_RS00720	PF13624	SurA N-terminal domain
THII_RS00735	PF00216	Bacterial DNA-binding protein
THII_RS00740	PF00004	ATPase family associated with various cellular activities (AAA)
THII_RS00740	PF02190	ATP-dependent protease La (LON) domain
THII_RS00740	PF05362	Lon protease (S16) C-terminal proteolytic domain
THII_RS00745	PF06689	ClpX C4-type zinc finger
THII_RS00745	PF07724	AAA domain (Cdc48 subfamily)
THII_RS00745	PF10431	C-terminal, D2-small domain, of ClpB protein
THII_RS00750	PF00574	Clp protease
THII_RS00755	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
THII_RS00755	PF05697	Bacterial trigger factor protein (TF)
THII_RS00755	PF05698	Bacterial trigger factor protein (TF) C-terminus
THII_RS00770	PF00037	4Fe-4S binding domain
THII_RS00775	PF01467	Cytidylyltransferase
THII_RS00780	PF00490	Delta-aminolevulinic acid dehydratase
THII_RS00785	PF13676	TIR domain
THII_RS00790	PF01588	Putative tRNA binding domain
THII_RS00790	PF03147	Ferredoxin-fold anticodon binding domain
THII_RS00790	PF03483	B3/4 domain
THII_RS00790	PF03484	tRNA synthetase B5 domain
THII_RS00795	PF00216	Bacterial DNA-binding protein
THII_RS00800	PF13411	MerR HTH family regulatory protein
THII_RS00805	PF01521	Iron-sulphur cluster biosynthesis
THII_RS00815	PF00239	Resolvase, N terminal domain
THII_RS00820	PF01385	THII_RS00820
THII_RS00820	PF07282	THII_RS00820
THII_RS00825	PF10130	THII_RS00825
THII_RS00835	PF01385	THII_RS00835
THII_RS00835	PF07282	THII_RS00835
THII_RS00835	PF12323	THII_RS00835
THII_RS00865	PF12784	THII_RS00865
THII_RS00875	PF01724	Domain of unknown function DUF29
THII_RS00900	PF13538	UvrD-like helicase C-terminal domain
THII_RS00900	PF13604	AAA domain
THII_RS00905	PF01520	N-acetylmuramoyl-L-alanine amidase
THII_RS00905	PF11741	AMIN domain
THII_RS00910	PF01145	SPFH domain / Band 7 family
THII_RS00915	PF01957	NfeD-like C-terminal, partner-binding
THII_RS00920	PF00085	Thioredoxin
THII_RS00925	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
THII_RS00925	PF07497	Rho termination factor, RNA-binding domain
THII_RS00925	PF07498	Rho termination factor, N-terminal domain
THII_RS00930	PF00535	Glycosyl transferase family 2
THII_RS00940	PF02685	Glucokinase
THII_RS00950	PF05685	Putative restriction endonuclease
THII_RS00970	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS00970	PF00672	HAMP domain
THII_RS00970	PF01471	Putative peptidoglycan binding domain
THII_RS00970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS00970	PF02743	Cache domain
THII_RS00975	PF00931	NB-ARC domain
THII_RS00980	PF00708	Acylphosphatase
THII_RS00985	PF01061	THII_RS00985
THII_RS00990	PF13529	Peptidase_C39 like family
THII_RS00995	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
THII_RS00995	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
THII_RS01000	PF00111	2Fe-2S iron-sulfur cluster binding domain
THII_RS01000	PF00941	FAD binding domain in molybdopterin dehydrogenase
THII_RS01000	PF01799	[2Fe-2S] binding domain
THII_RS01000	PF03450	CO dehydrogenase flavoprotein C-terminal domain
THII_RS01005	PF00696	Amino acid kinase family
THII_RS01005	PF01842	ACT domain
THII_RS01005	PF13840	ACT domain
THII_RS01010	PF02599	Global regulator protein family
THII_RS01015	PF09835	THII_RS01015
THII_RS01020	PF00753	Metallo-beta-lactamase superfamily
THII_RS01020	PF03772	THII_RS01020
THII_RS01020	PF13567	THII_RS01020
THII_RS01025	PF05175	Methyltransferase small domain
THII_RS01030	PF01048	Phosphorylase superfamily
THII_RS01035	PF00156	Phosphoribosyl transferase domain
THII_RS01040	PF08241	Methyltransferase domain
THII_RS01045	PF05685	Putative restriction endonuclease
THII_RS01055	PF13489	Methyltransferase domain
THII_RS01060	PF09826	THII_RS01060
THII_RS01065	PF01678	Diaminopimelate epimerase
THII_RS01070	PF04340	Protein of unknown function, DUF484
THII_RS01075	PF02754	THII_RS01075
THII_RS01080	PF00400	WD domain, G-beta repeat
THII_RS01085	PF00005	ABC transporter
THII_RS01085	PF14524	Wzt C-terminal domain
THII_RS01090	PF00316	Fructose-1-6-bisphosphatase
THII_RS01095	PF00268	Ribonucleotide reductase, small chain
THII_RS01100	PF00317	Ribonucleotide reductase, all-alpha domain
THII_RS01100	PF02867	Ribonucleotide reductase, barrel domain
THII_RS01100	PF03477	ATP cone domain
THII_RS01105	PF01039	Carboxyl transferase domain
THII_RS01110	PF12576	THII_RS01110
THII_RS01115	PF09831	THII_RS01115
THII_RS01120	PF02481	DNA recombination-mediator protein A
THII_RS01125	PF01724	Domain of unknown function DUF29
THII_RS01130	PF01724	Domain of unknown function DUF29
THII_RS01135	PF00593	TonB dependent receptor
THII_RS01135	PF07715	TonB-dependent Receptor Plug Domain
THII_RS01140	PF10053	THII_RS01140
THII_RS01145	PF13538	UvrD-like helicase C-terminal domain
THII_RS01150	PF10047	THII_RS01150
THII_RS01160	PF15738	THII_RS01160
THII_RS01165	PF00067	Cytochrome P450
THII_RS01180	PF01266	FAD dependent oxidoreductase
THII_RS01185	PF00202	Aminotransferase class-III
THII_RS01185	PF01118	Semialdehyde dehydrogenase, NAD binding domain
THII_RS01190	PF01850	PIN domain
THII_RS01205	PF13520	Amino acid permease
THII_RS01220	PF09924	Uncharacterized conserved protein (DUF2156)
THII_RS01225	PF00781	Diacylglycerol kinase catalytic domain
THII_RS01230	PF01494	FAD binding domain
THII_RS01235	PF07927	YcfA-like protein
THII_RS01245	PF07690	Major Facilitator Superfamily
THII_RS01255	PF01192	RNA polymerase Rpb6
THII_RS01260	PF02824	TGS domain
THII_RS01260	PF04607	Region found in RelA / SpoT proteins
THII_RS01260	PF13291	ACT domain
THII_RS01260	PF13328	HD domain
THII_RS01265	PF03695	Uncharacterised protein family (UPF0149)
THII_RS01270	PF00557	Metallopeptidase family M24
THII_RS01270	PF05195	Aminopeptidase P, N-terminal domain
THII_RS01280	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
THII_RS01290	PF03934	Type II secretion system (T2SS), protein K
THII_RS01295	PF00343	Carbohydrate phosphorylase
THII_RS01295	PF11897	THII_RS01295
THII_RS01300	PF00120	Glutamine synthetase, catalytic domain
THII_RS01300	PF03951	Glutamine synthetase, beta-Grasp domain
THII_RS01305	PF01545	Cation efflux family
THII_RS01305	PF16916	THII_RS01305
THII_RS01310	PF01345	THII_RS01310
THII_RS01310	PF10282	Lactonase, 7-bladed beta-propeller
THII_RS01315	PF02590	Predicted SPOUT methyltransferase
THII_RS01320	PF02545	Maf-like protein
THII_RS01325	PF00805	Pentapeptide repeats (8 copies)
THII_RS01335	PF14333	THII_RS01335
THII_RS01340	PF00128	Alpha amylase, catalytic domain
THII_RS01345	PF00072	Response regulator receiver domain
THII_RS01345	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS01345	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS01350	PF00072	Response regulator receiver domain
THII_RS01350	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS01350	PF00672	HAMP domain
THII_RS01350	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS01350	PF17203	THII_RS01350
THII_RS01365	PF00384	Molybdopterin oxidoreductase
THII_RS01365	PF01568	Molydopterin dinucleotide binding domain
THII_RS01380	PF01650	Peptidase C13 family
THII_RS01380	PF07494	Two component regulator propeller
THII_RS01385	PF07788	THII_RS01385
THII_RS01385	PF12644	THII_RS01385
THII_RS01390	PF03415	Clostripain family
THII_RS01395	PF01400	Astacin (Peptidase family M12A)
THII_RS01405	PF05685	Putative restriction endonuclease
THII_RS01410	PF05685	Putative restriction endonuclease
THII_RS01420	PF12770	THII_RS01420
THII_RS01430	PF04754	THII_RS01430
THII_RS01430	PF14261	THII_RS01430
THII_RS01435	PF16363	THII_RS01435
THII_RS01440	PF01370	NAD dependent epimerase/dehydratase family
THII_RS01445	PF01196	Ribosomal protein L17
THII_RS01450	PF01000	RNA polymerase Rpb3/RpoA insert domain
THII_RS01450	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
THII_RS01450	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
THII_RS01455	PF00163	Ribosomal protein S4/S9 N-terminal domain
THII_RS01455	PF01479	S4 domain
THII_RS01460	PF00411	Ribosomal protein S11
THII_RS01465	PF00416	Ribosomal protein S13/S18
THII_RS01470	PF00344	SecY translocase
THII_RS01475	PF00828	Ribosomal protein L18e/L15
THII_RS01480	PF00327	Ribosomal protein L30p/L7e
THII_RS01485	PF00333	Ribosomal protein S5, N-terminal domain
THII_RS01485	PF03719	Ribosomal protein S5, C-terminal domain
THII_RS01490	PF00861	Ribosomal L18p/L5e family
THII_RS01495	PF00347	Ribosomal protein L6
THII_RS01500	PF00410	Ribosomal protein S8
THII_RS01505	PF00253	Ribosomal protein S14p/S29e
THII_RS01510	PF00281	Ribosomal protein L5
THII_RS01510	PF00673	ribosomal L5P family C-terminus
THII_RS01515	PF00467	KOW motif
THII_RS01515	PF17136	THII_RS01515
THII_RS01520	PF00238	Ribosomal protein L14p/L23e
THII_RS01525	PF00366	Ribosomal protein S17
THII_RS01530	PF00831	Ribosomal L29 protein
THII_RS01535	PF00252	Ribosomal protein L16p/L10e
THII_RS01540	PF00189	Ribosomal protein S3, C-terminal domain
THII_RS01540	PF07650	KH domain
THII_RS01545	PF00237	Ribosomal protein L22p/L17e
THII_RS01550	PF00203	Ribosomal protein S19
THII_RS01555	PF00181	Ribosomal Proteins L2, RNA binding domain
THII_RS01555	PF03947	Ribosomal Proteins L2, C-terminal domain
THII_RS01560	PF00276	Ribosomal protein L23
THII_RS01565	PF00573	Ribosomal protein L4/L1 family
THII_RS01570	PF00297	Ribosomal protein L3
THII_RS01575	PF00338	Ribosomal protein S10p/S20e
THII_RS01580	PF00009	Elongation factor Tu GTP binding domain
THII_RS01580	PF03143	Elongation factor Tu C-terminal domain
THII_RS01580	PF03144	Elongation factor Tu domain 2
THII_RS01585	PF00009	Elongation factor Tu GTP binding domain
THII_RS01585	PF00679	Elongation factor G C-terminus
THII_RS01585	PF03144	Elongation factor Tu domain 2
THII_RS01585	PF03764	Elongation factor G, domain IV
THII_RS01585	PF14492	Elongation Factor G, domain II
THII_RS01590	PF00177	Ribosomal protein S7p/S5e
THII_RS01595	PF00164	Ribosomal protein S12/S23
THII_RS01630	PF00474	Sodium:solute symporter family
THII_RS01635	PF00034	Cytochrome c
THII_RS01640	PF01322	Cytochrome C'
THII_RS01645	PF04055	Radical SAM superfamily
THII_RS01650	PF00561	alpha/beta hydrolase fold
THII_RS01665	PF00805	Pentapeptide repeats (8 copies)
THII_RS01670	PF00623	RNA polymerase Rpb1, domain 2
THII_RS01670	PF04983	RNA polymerase Rpb1, domain 3
THII_RS01670	PF04997	RNA polymerase Rpb1, domain 1
THII_RS01670	PF04998	RNA polymerase Rpb1, domain 5
THII_RS01670	PF05000	RNA polymerase Rpb1, domain 4
THII_RS01685	PF12729	THII_RS01685
THII_RS01690	PF00034	Cytochrome c
THII_RS01695	PF00115	Cytochrome C and Quinol oxidase polypeptide I
THII_RS01700	PF07728	AAA domain (dynein-related subfamily)
THII_RS01700	PF08406	THII_RS01700
THII_RS01710	PF12801	THII_RS01710
THII_RS01715	PF00092	von Willebrand factor type A domain
THII_RS01725	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
THII_RS01740	PF01381	Helix-turn-helix
THII_RS01745	PF05685	Putative restriction endonuclease
THII_RS01750	PF05685	Putative restriction endonuclease
THII_RS01760	PF03969	AFG1-like ATPase
THII_RS01765	PF00011	Hsp20/alpha crystallin family
THII_RS01770	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS01770	PF00672	HAMP domain
THII_RS01770	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS01770	PF02743	Cache domain
THII_RS01775	PF04371	Porphyromonas-type peptidyl-arginine deiminase
THII_RS01780	PF05685	Putative restriction endonuclease
THII_RS01785	PF00795	Carbon-nitrogen hydrolase
THII_RS01790	PF00072	Response regulator receiver domain
THII_RS01790	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS01790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS01795	PF01145	SPFH domain / Band 7 family
THII_RS01795	PF15975	THII_RS01795
THII_RS01800	PF07290	THII_RS01800
THII_RS01810	PF02542	YgbB family
THII_RS01815	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
THII_RS01820	PF04977	Septum formation initiator
THII_RS01835	PF08003	Protein of unknown function (DUF1698)
THII_RS01845	PF01634	ATP phosphoribosyltransferase
THII_RS01850	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
THII_RS01855	PF00117	Glutamine amidotransferase class-I
THII_RS01865	PF07788	THII_RS01865
THII_RS01865	PF12644	THII_RS01865
THII_RS01895	PF13469	Sulfotransferase family
THII_RS01900	PF05685	Putative restriction endonuclease
THII_RS01905	PF15919	THII_RS01905
THII_RS01915	PF00365	Phosphofructokinase
THII_RS01925	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
THII_RS01930	PF01297	Periplasmic solute binding protein family
THII_RS01935	PF00005	ABC transporter
THII_RS01940	PF00950	THII_RS01940
THII_RS01950	PF00122	E1-E2 ATPase
THII_RS01950	PF00689	Cation transporting ATPase, C-terminus
THII_RS01950	PF00690	Cation transporter/ATPase, N-terminus
THII_RS01950	PF00702	haloacid dehalogenase-like hydrolase
THII_RS01955	PF01724	Domain of unknown function DUF29
THII_RS01960	PF02492	CobW/HypB/UreG, nucleotide-binding domain
THII_RS01960	PF07683	Cobalamin synthesis protein cobW C-terminal domain
THII_RS01965	PF00753	Metallo-beta-lactamase superfamily
THII_RS01975	PF01927	THII_RS01975
THII_RS01975	PF14451	THII_RS01975
THII_RS01980	PF02152	Dihydroneopterin aldolase
THII_RS01985	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
THII_RS01990	PF13561	Enoyl-(Acyl carrier protein) reductase
THII_RS01995	PF02636	Putative S-adenosyl-L-methionine-dependent methyltransferase
THII_RS02005	PF01381	Helix-turn-helix
THII_RS02010	PF05973	THII_RS02010
THII_RS02015	PF05016	Plasmid stabilisation system protein
THII_RS02030	PF03080	THII_RS02030
THII_RS02055	PF00271	Helicase conserved C-terminal domain
THII_RS02055	PF00437	Type II/IV secretion system protein
THII_RS02055	PF04408	Helicase associated domain (HA2)
THII_RS02055	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
THII_RS02055	PF11898	THII_RS02055
THII_RS02060	PF05050	Methyltransferase FkbM domain
THII_RS02065	PF05050	Methyltransferase FkbM domain
THII_RS02070	PF01171	PP-loop family
THII_RS02070	PF09179	TilS substrate binding domain
THII_RS02070	PF11734	TilS substrate C-terminal domain
THII_RS02075	PF00183	Hsp90 protein
THII_RS02075	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS02080	PF03848	Tellurite resistance protein TehB
THII_RS02085	PF00293	NUDIX domain
THII_RS02085	PF14803	Nudix N-terminal
THII_RS02090	PF02698	DUF218 domain
THII_RS02095	PF00041	Fibronectin type III domain
THII_RS02100	PF13353	4Fe-4S single cluster domain
THII_RS02105	PF01132	Elongation factor P (EF-P) OB domain
THII_RS02105	PF08207	Elongation factor P (EF-P) KOW-like domain
THII_RS02105	PF09285	Elongation factor P, C-terminal
THII_RS02110	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
THII_RS02115	PF04376	THII_RS02115
THII_RS02115	PF04377	THII_RS02115
THII_RS02120	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
THII_RS02120	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
THII_RS02125	PF01590	GAF domain
THII_RS02125	PF01966	HD domain
THII_RS02125	PF13487	HD domain
THII_RS02130	PF10087	THII_RS02130
THII_RS02135	PF00437	Type II/IV secretion system protein
THII_RS02135	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
THII_RS02140	PF03065	Glycosyl hydrolase family 57
THII_RS02145	PF00398	Ribosomal RNA adenine dimethylase
THII_RS02150	PF00565	Staphylococcal nuclease homologue
THII_RS02155	PF01724	Domain of unknown function DUF29
THII_RS02160	PF07788	THII_RS02160
THII_RS02160	PF12644	THII_RS02160
THII_RS02170	PF13085	2Fe-2S iron-sulfur cluster binding domain
THII_RS02170	PF13534	4Fe-4S dicluster domain
THII_RS02175	PF00890	FAD binding domain
THII_RS02175	PF02910	Fumarate reductase flavoprotein C-term
THII_RS02180	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
THII_RS02185	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
THII_RS02190	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
THII_RS02195	PF01263	Aldose 1-epimerase
THII_RS02200	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
THII_RS02200	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
THII_RS02205	PF05685	Putative restriction endonuclease
THII_RS02215	PF08241	Methyltransferase domain
THII_RS02225	PF00691	OmpA family
THII_RS02235	PF00072	Response regulator receiver domain
THII_RS02235	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS02235	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS02240	PF04542	Sigma-70 region 2
THII_RS02240	PF04545	Sigma-70, region 4
THII_RS02245	PF00535	Glycosyl transferase family 2
THII_RS02250	PF10066	THII_RS02250
THII_RS02255	PF00916	THII_RS02255
THII_RS02255	PF01740	STAS domain
THII_RS02265	PF12838	4Fe-4S dicluster domain
THII_RS02265	PF13187	4Fe-4S dicluster domain
THII_RS02270	PF02687	THII_RS02270
THII_RS02280	PF00400	WD domain, G-beta repeat
THII_RS02285	PF08780	Nucleotidyltransferase substrate binding protein like
THII_RS02290	PF01909	Nucleotidyltransferase domain
THII_RS02300	PF01850	PIN domain
THII_RS02320	PF04199	Putative cyclase
THII_RS02330	PF00390	Malic enzyme, N-terminal domain
THII_RS02330	PF01515	Phosphate acetyl/butaryl transferase
THII_RS02330	PF03949	Malic enzyme, NAD binding domain
THII_RS02335	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
THII_RS02340	PF07927	YcfA-like protein
THII_RS02350	PF05685	Putative restriction endonuclease
THII_RS02355	PF05685	Putative restriction endonuclease
THII_RS02360	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
THII_RS02365	PF12804	MobA-like NTP transferase domain
THII_RS02370	PF02625	XdhC and CoxI family
THII_RS02370	PF13478	XdhC Rossmann domain
THII_RS02375	PF00111	2Fe-2S iron-sulfur cluster binding domain
THII_RS02375	PF01799	[2Fe-2S] binding domain
THII_RS02380	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
THII_RS02385	PF01327	Polypeptide deformylase
THII_RS02390	PF00551	Formyl transferase
THII_RS02390	PF02911	Formyl transferase, C-terminal domain
THII_RS02395	PF05685	Putative restriction endonuclease
THII_RS02415	PF01139	tRNA-splicing ligase RtcB
THII_RS02430	PF00005	ABC transporter
THII_RS02435	PF02687	THII_RS02435
THII_RS02435	PF12704	MacB-like periplasmic core domain
THII_RS02440	PF00005	ABC transporter
THII_RS02445	PF02687	THII_RS02445
THII_RS02445	PF12704	MacB-like periplasmic core domain
THII_RS02465	PF00072	Response regulator receiver domain
THII_RS02465	PF00158	Sigma-54 interaction domain
THII_RS02470	PF01724	Domain of unknown function DUF29
THII_RS02490	PF01797	Transposase IS200 like
THII_RS02500	PF01850	PIN domain
THII_RS02505	PF00069	Protein kinase domain
THII_RS02505	PF00072	Response regulator receiver domain
THII_RS02505	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS02505	PF01590	GAF domain
THII_RS02505	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS02505	PF13191	AAA ATPase domain
THII_RS02525	PF02424	ApbE family
THII_RS02530	PF05787	Bacterial protein of unknown function (DUF839)
THII_RS02535	PF03160	Calx-beta domain
THII_RS02540	PF03160	Calx-beta domain
THII_RS02555	PF02384	N-6 DNA Methylase
THII_RS02555	PF12950	TaqI-like C-terminal specificity domain
THII_RS02565	PF03160	Calx-beta domain
THII_RS02570	PF01709	Transcriptional regulator
THII_RS02575	PF02075	Crossover junction endodeoxyribonuclease RuvC
THII_RS02580	PF01330	RuvA N terminal domain
THII_RS02580	PF07499	RuvA, C-terminal domain
THII_RS02580	PF14520	Helix-hairpin-helix domain
THII_RS02585	PF00561	alpha/beta hydrolase fold
THII_RS02595	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
THII_RS02600	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
THII_RS02605	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
THII_RS02610	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
THII_RS02615	PF13711	THII_RS02615
THII_RS02620	PF10387	Protein of unknown function (DUF2442)
THII_RS02625	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
THII_RS02630	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
THII_RS02640	PF05685	Putative restriction endonuclease
THII_RS02645	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
THII_RS02645	PF10531	SLBB domain
THII_RS02645	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
THII_RS02650	PF13302	Acetyltransferase (GNAT) domain
THII_RS02655	PF13469	Sulfotransferase family
THII_RS02660	PF10049	THII_RS02660
THII_RS02665	PF01724	Domain of unknown function DUF29
THII_RS02670	PF00463	Isocitrate lyase family
THII_RS02675	PF01274	Malate synthase
THII_RS02680	PF04545	Sigma-70, region 4
THII_RS02685	PF05685	Putative restriction endonuclease
THII_RS02690	PF00266	Aminotransferase class-V
THII_RS02695	PF01583	Adenylylsulphate kinase
THII_RS02700	PF00072	Response regulator receiver domain
THII_RS02705	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS02710	PF00072	Response regulator receiver domain
THII_RS02710	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS02715	PF04317	THII_RS02715
THII_RS02720	PF05128	THII_RS02720
THII_RS02725	PF01724	Domain of unknown function DUF29
THII_RS02730	PF04014	Antidote-toxin recognition MazE
THII_RS02735	PF01850	PIN domain
THII_RS02745	PF00072	Response regulator receiver domain
THII_RS02745	PF01339	CheB methylesterase
THII_RS02750	PF01739	CheR methyltransferase, SAM binding domain
THII_RS02750	PF03705	CheR methyltransferase, all-alpha domain
THII_RS02755	PF03130	PBS lyase HEAT-like repeat
THII_RS02755	PF13646	HEAT repeats
THII_RS02760	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS02765	PF01584	CheW-like domain
THII_RS02770	PF01584	CheW-like domain
THII_RS02770	PF01627	Hpt domain
THII_RS02770	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS02770	PF02895	Signal transducing histidine kinase, homodimeric domain
THII_RS02775	PF00072	Response regulator receiver domain
THII_RS02780	PF15919	THII_RS02780
THII_RS02785	PF07927	YcfA-like protein
THII_RS02790	PF00696	Amino acid kinase family
THII_RS02795	PF03937	Flavinator of succinate dehydrogenase
THII_RS02800	PF00924	Mechanosensitive ion channel
THII_RS02800	PF13458	Periplasmic binding protein
THII_RS02805	PF01541	GIY-YIG catalytic domain
THII_RS02805	PF02151	UvrB/uvrC motif
THII_RS02805	PF08459	UvrC Helix-hairpin-helix N-terminal
THII_RS02805	PF14520	Helix-hairpin-helix domain
THII_RS02810	PF01066	CDP-alcohol phosphatidyltransferase
THII_RS02815	PF01930	Domain of unknown function DUF83
THII_RS02820	PF09827	CRISPR associated protein Cas2
THII_RS02825	PF01867	CRISPR associated protein Cas1
THII_RS02830	PF15919	THII_RS02830
THII_RS02840	PF00270	DEAD/DEAH box helicase
THII_RS02840	PF00271	Helicase conserved C-terminal domain
THII_RS02845	PF06769	Plasmid encoded toxin Txe
THII_RS02850	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
THII_RS02855	PF09704	CRISPR-associated protein (Cas_Cas5)
THII_RS02860	PF05107	THII_RS02860
THII_RS02865	PF09484	THII_RS02865
THII_RS02870	PF00109	Beta-ketoacyl synthase, N-terminal domain
THII_RS02870	PF02801	Beta-ketoacyl synthase, C-terminal domain
THII_RS02875	PF07977	FabA-like domain
THII_RS02900	PF01625	Peptide methionine sulfoxide reductase
THII_RS02905	PF05036	Sporulation related domain
THII_RS02910	PF01913	Formylmethanofuran-tetrahydromethanopterin formyltransferase
THII_RS02910	PF02741	FTR, proximal lobe
THII_RS02915	PF01493	GXGXG motif
THII_RS02920	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
THII_RS02925	PF00263	THII_RS02925
THII_RS02925	PF03958	Bacterial type II/III secretion system short domain
THII_RS02930	PF11356	Type IV pilus biogenesis
THII_RS02940	PF00378	Enoyl-CoA hydratase/isomerase family
THII_RS02940	PF00551	Formyl transferase
THII_RS02940	PF02911	Formyl transferase, C-terminal domain
THII_RS02945	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
THII_RS02950	PF08245	Mur ligase middle domain
THII_RS02955	PF00464	Serine hydroxymethyltransferase
THII_RS02960	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
THII_RS02960	PF01872	RibD C-terminal domain
THII_RS02965	PF13440	THII_RS02965
THII_RS02970	PF13469	Sulfotransferase family
THII_RS02980	PF03886	Protein of unknown function (DUF330)
THII_RS02985	PF07007	Protein of unknown function (DUF1311)
THII_RS02995	PF00521	DNA gyrase/topoisomerase IV, subunit A
THII_RS02995	PF03989	DNA gyrase C-terminal domain, beta-propeller
THII_RS03000	PF00893	Small Multidrug Resistance protein
THII_RS03005	PF02348	Cytidylyltransferase
THII_RS03015	PF05685	Putative restriction endonuclease
THII_RS03025	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
THII_RS03030	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
THII_RS03030	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
THII_RS03035	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
THII_RS03035	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
THII_RS03040	PF02635	DsrE/DsrF-like family
THII_RS03045	PF02635	DsrE/DsrF-like family
THII_RS03050	PF04077	DsrH like protein
THII_RS03055	PF04358	DsrC like protein
THII_RS03060	PF02665	Nitrate reductase gamma subunit
THII_RS03065	PF13183	4Fe-4S dicluster domain
THII_RS03070	PF07992	Pyridine nucleotide-disulphide oxidoreductase
THII_RS03070	PF13187	4Fe-4S dicluster domain
THII_RS03070	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
THII_RS03080	PF13247	4Fe-4S dicluster domain
THII_RS03085	PF03916	THII_RS03085
THII_RS03090	PF00591	Glycosyl transferase family, a/b domain
THII_RS03090	PF02885	Glycosyl transferase family, helical bundle domain
THII_RS03110	PF16576	THII_RS03110
THII_RS03115	PF00873	AcrB/AcrD/AcrF family
THII_RS03150	PF00580	UvrD/REP helicase N-terminal domain
THII_RS03150	PF13361	UvrD-like helicase C-terminal domain
THII_RS03165	PF00534	Glycosyl transferases group 1
THII_RS03170	PF02350	UDP-N-acetylglucosamine 2-epimerase
THII_RS03175	PF03808	THII_RS03175
THII_RS03180	PF02463	RecF/RecN/SMC N terminal domain
THII_RS03180	PF06470	SMC proteins Flexible Hinge Domain
THII_RS03190	PF05711	Macrocin-O-methyltransferase (TylF)
THII_RS03195	PF01447	Thermolysin metallopeptidase, catalytic domain
THII_RS03195	PF02868	Thermolysin metallopeptidase, alpha-helical domain
THII_RS03195	PF07504	Fungalysin/Thermolysin Propeptide Motif
THII_RS03200	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
THII_RS03205	PF05860	haemagglutination activity domain
THII_RS03210	PF01979	Amidohydrolase family
THII_RS03215	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
THII_RS03215	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
THII_RS03220	PF00156	Phosphoribosyl transferase domain
THII_RS03225	PF03652	Uncharacterised protein family (UPF0081)
THII_RS03230	PF02622	Uncharacterized ACR, COG1678
THII_RS03235	PF03544	Gram-negative bacterial TonB protein C-terminal
THII_RS03250	PF10119	THII_RS03250
THII_RS03250	PF13847	Methyltransferase domain
THII_RS03260	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
THII_RS03260	PF03466	LysR substrate binding domain
THII_RS03265	PF00437	Type II/IV secretion system protein
THII_RS03270	PF00437	Type II/IV secretion system protein
THII_RS03275	PF00437	Type II/IV secretion system protein
THII_RS03280	PF00005	ABC transporter
THII_RS03285	PF02569	Pantoate-beta-alanine ligase
THII_RS03295	PF13229	Right handed beta helix region
THII_RS03300	PF13229	Right handed beta helix region
THII_RS03305	PF00814	Glycoprotease family
THII_RS03315	PF13419	Haloacid dehalogenase-like hydrolase
THII_RS03320	PF13489	Methyltransferase domain
THII_RS03330	PF03062	THII_RS03330
THII_RS03335	PF00501	AMP-binding enzyme
THII_RS03335	PF13193	AMP-binding enzyme C-terminal domain
THII_RS03345	PF00550	Phosphopantetheine attachment site
THII_RS03350	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
THII_RS03350	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
THII_RS03355	PF03597	THII_RS03355
THII_RS03370	PF00528	Binding-protein-dependent transport system inner membrane component
THII_RS03375	PF00528	Binding-protein-dependent transport system inner membrane component
THII_RS03380	PF01790	THII_RS03380
THII_RS03385	PF04773	FecR protein
THII_RS03395	PF00072	Response regulator receiver domain
THII_RS03395	PF04397	LytTr DNA-binding domain
THII_RS03400	PF06580	THII_RS03400
THII_RS03405	PF01841	Transglutaminase-like superfamily
THII_RS03405	PF08379	THII_RS03405
THII_RS03410	PF06245	THII_RS03410
THII_RS03425	PF05626	THII_RS03425
THII_RS03435	PF01225	Mur ligase family, catalytic domain
THII_RS03435	PF02875	Mur ligase family, glutamate ligase domain
THII_RS03435	PF08245	Mur ligase middle domain
THII_RS03440	PF02441	Flavoprotein
THII_RS03450	PF14072	THII_RS03450
THII_RS03460	PF13481	AAA domain
THII_RS03460	PF13541	Subunit ChlI of Mg-chelatase
THII_RS03470	PF03379	THII_RS03470
THII_RS03475	PF13191	AAA ATPase domain
THII_RS03485	PF07719	Tetratricopeptide repeat
THII_RS03485	PF13414	TPR repeat
THII_RS03485	PF13424	Tetratricopeptide repeat
THII_RS03485	PF13844	Glycosyl transferase family 41
THII_RS03490	PF06094	AIG2-like family
THII_RS03495	PF01272	Transcription elongation factor, GreA/GreB, C-term
THII_RS03495	PF03449	Transcription elongation factor, N-terminal
THII_RS03500	PF02142	MGS-like domain
THII_RS03500	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
THII_RS03500	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
THII_RS03505	PF00117	Glutamine amidotransferase class-I
THII_RS03505	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
THII_RS03515	PF14467	Domain of unknown function (DUF4426)
THII_RS03520	PF00202	Aminotransferase class-III
THII_RS03525	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
THII_RS03525	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
THII_RS03530	PF00480	ROK family
THII_RS03535	PF00005	ABC transporter
THII_RS03540	PF00535	Glycosyl transferase family 2
THII_RS03555	PF08003	Protein of unknown function (DUF1698)
THII_RS03565	PF09913	THII_RS03565
THII_RS03575	PF00303	Thymidylate synthase
THII_RS03580	PF01555	DNA methylase
THII_RS03585	PF13231	THII_RS03585
THII_RS03590	PF00202	Aminotransferase class-III
THII_RS03595	PF02096	60Kd inner membrane protein
THII_RS03595	PF14849	YidC periplasmic domain
THII_RS03600	PF00825	Ribonuclease P
THII_RS03605	PF00468	Ribosomal protein L34
THII_RS03610	PF00712	DNA polymerase III beta subunit, N-terminal domain
THII_RS03610	PF02767	DNA polymerase III beta subunit, central domain
THII_RS03610	PF02768	DNA polymerase III beta subunit, C-terminal domain
THII_RS03615	PF13231	THII_RS03615
THII_RS03620	PF09594	THII_RS03620
THII_RS03625	PF03706	THII_RS03625
THII_RS03630	PF01522	Polysaccharide deacetylase
THII_RS03635	PF00535	Glycosyl transferase family 2
THII_RS03640	PF00685	Sulfotransferase domain
THII_RS03645	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
THII_RS03650	PF16363	THII_RS03650
THII_RS03655	PF00535	Glycosyl transferase family 2
THII_RS03660	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
THII_RS03665	PF00551	Formyl transferase
THII_RS03670	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
THII_RS03680	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
THII_RS03685	PF00657	GDSL-like Lipase/Acylhydrolase
THII_RS03690	PF13205	Bacterial Ig-like domain
THII_RS03690	PF13229	Right handed beta helix region
THII_RS03695	PF01451	Low molecular weight phosphotyrosine protein phosphatase
THII_RS03700	PF03602	Conserved hypothetical protein 95
THII_RS03705	PF00009	Elongation factor Tu GTP binding domain
THII_RS03705	PF03144	Elongation factor Tu domain 2
THII_RS03705	PF16658	THII_RS03705
THII_RS03710	PF13641	Glycosyltransferase like family 2
THII_RS03715	PF00072	Response regulator receiver domain
THII_RS03715	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS03715	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS03715	PF13185	GAF domain
THII_RS03720	PF00072	Response regulator receiver domain
THII_RS03720	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS03720	PF00989	PAS fold
THII_RS03720	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS03735	PF00206	Lyase
THII_RS03735	PF14698	Argininosuccinate lyase C-terminal
THII_RS03745	PF03030	Inorganic H+ pyrophosphatase
THII_RS03750	PF16998	THII_RS03750
THII_RS03755	PF01650	Peptidase C13 family
THII_RS03755	PF03160	Calx-beta domain
THII_RS03755	PF05345	Putative Ig domain
THII_RS03755	PF13385	Concanavalin A-like lectin/glucanases superfamily
THII_RS03760	PF01734	Patatin-like phospholipase
THII_RS03775	PF00483	Nucleotidyl transferase
THII_RS03775	PF00535	Glycosyl transferase family 2
THII_RS03780	PF09913	THII_RS03780
THII_RS03785	PF00005	ABC transporter
THII_RS03785	PF00664	ABC transporter transmembrane region
THII_RS03795	PF06508	Queuosine biosynthesis protein QueC
THII_RS03800	PF00691	OmpA family
THII_RS03810	PF03739	THII_RS03810
THII_RS03825	PF00485	Phosphoribulokinase / Uridine kinase family
THII_RS03835	PF01841	Transglutaminase-like superfamily
THII_RS03835	PF11992	THII_RS03835
THII_RS03835	PF13559	THII_RS03835
THII_RS03840	PF01882	THII_RS03840
THII_RS03850	PF00072	Response regulator receiver domain
THII_RS03850	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS03865	PF07992	Pyridine nucleotide-disulphide oxidoreductase
THII_RS03870	PF07992	Pyridine nucleotide-disulphide oxidoreductase
THII_RS03875	PF00448	SRP54-type protein, GTPase domain
THII_RS03875	PF02881	SRP54-type protein, helical bundle domain
THII_RS03880	PF00005	ABC transporter
THII_RS03885	PF02687	THII_RS03885
THII_RS03890	PF01724	Domain of unknown function DUF29
THII_RS03895	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
THII_RS03895	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
THII_RS03900	PF00456	Transketolase, thiamine diphosphate binding domain
THII_RS03900	PF02779	Transketolase, pyrimidine binding domain
THII_RS03900	PF02780	Transketolase, C-terminal domain
THII_RS03905	PF14200	Ricin-type beta-trefoil lectin domain-like
THII_RS03920	PF12784	THII_RS03920
THII_RS03935	PF01381	Helix-turn-helix
THII_RS03945	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
THII_RS03950	PF04055	Radical SAM superfamily
THII_RS03960	PF00082	Subtilase family
THII_RS03965	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
THII_RS03965	PF02706	Chain length determinant protein
THII_RS03965	PF13807	THII_RS03965
THII_RS03975	PF02563	Polysaccharide biosynthesis/export protein
THII_RS03975	PF10531	SLBB domain
THII_RS03980	PF10082	THII_RS03980
THII_RS03990	PF00072	Response regulator receiver domain
THII_RS03995	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS03995	PF00515	Tetratricopeptide repeat
THII_RS03995	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS03995	PF13414	TPR repeat
THII_RS04005	PF00117	Glutamine amidotransferase class-I
THII_RS04010	PF01494	FAD binding domain
THII_RS04020	PF00929	Exonuclease
THII_RS04020	PF08411	Exonuclease C-terminal
THII_RS04025	PF00005	ABC transporter
THII_RS04030	PF02687	THII_RS04030
THII_RS04030	PF12704	MacB-like periplasmic core domain
THII_RS04035	PF13437	HlyD family secretion protein
THII_RS04040	PF12844	Helix-turn-helix domain
THII_RS04050	PF00293	NUDIX domain
THII_RS04055	PF09836	Uncharacterized protein conserved in bacteria (DUF2063)
THII_RS04060	PF05114	Protein of unknown function (DUF692)
THII_RS04080	PF04357	THII_RS04080
THII_RS04090	PF02397	THII_RS04090
THII_RS04095	PF01734	Patatin-like phospholipase
THII_RS04115	PF12770	THII_RS04115
THII_RS04120	PF00535	Glycosyl transferase family 2
THII_RS04125	PF00535	Glycosyl transferase family 2
THII_RS04125	PF02709	N-terminal domain of galactosyltransferase
THII_RS04130	PF09559	THII_RS04130
THII_RS04140	PF03692	THII_RS04140
THII_RS04145	PF00375	Sodium:dicarboxylate symporter family
THII_RS04150	PF00230	Major intrinsic protein
THII_RS04155	PF09361	THII_RS04155
THII_RS04160	PF13561	Enoyl-(Acyl carrier protein) reductase
THII_RS04165	PF05233	THII_RS04165
THII_RS04165	PF07879	THII_RS04165
THII_RS04170	PF00108	Thiolase, N-terminal domain
THII_RS04170	PF02803	Thiolase, C-terminal domain
THII_RS04180	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
THII_RS04185	PF00176	SNF2 family N-terminal domain
THII_RS04185	PF00271	Helicase conserved C-terminal domain
THII_RS04195	PF13649	Methyltransferase domain
THII_RS04200	PF03814	THII_RS04200
THII_RS04205	PF00122	E1-E2 ATPase
THII_RS04205	PF00702	haloacid dehalogenase-like hydrolase
THII_RS04210	PF02669	THII_RS04210
THII_RS04220	PF11743	THII_RS04220
THII_RS04225	PF04386	Stringent starvation protein B
THII_RS04230	PF02167	Cytochrome C1 family
THII_RS04235	PF00032	Cytochrome b(C-terminal)/b6/petD
THII_RS04235	PF00033	Cytochrome b(N-terminal)/b6/petB
THII_RS04240	PF00355	Rieske [2Fe-2S] domain
THII_RS04240	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
THII_RS04245	PF00263	THII_RS04245
THII_RS04245	PF03958	Bacterial type II/III secretion system short domain
THII_RS04255	PF08334	Type II secretion system (T2SS), protein G
THII_RS04255	PF13544	THII_RS04255
THII_RS04260	PF13633	Prokaryotic N-terminal methylation site
THII_RS04265	PF13544	THII_RS04265
THII_RS04270	PF13544	THII_RS04270
THII_RS04275	PF07238	PilZ domain
THII_RS04280	PF13561	Enoyl-(Acyl carrier protein) reductase
THII_RS04285	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
THII_RS04290	PF01022	Bacterial regulatory protein, arsR family
THII_RS04295	PF01758	Sodium Bile acid symporter family
THII_RS04300	PF03773	THII_RS04300
THII_RS04305	PF13192	Thioredoxin domain
THII_RS04310	PF01451	Low molecular weight phosphotyrosine protein phosphatase
THII_RS04320	PF00692	dUTPase
THII_RS04325	PF10130	THII_RS04325
THII_RS04330	PF00400	WD domain, G-beta repeat
THII_RS04330	PF13360	PQQ-like domain
THII_RS04335	PF13676	TIR domain
THII_RS04340	PF09323	THII_RS04340
THII_RS04345	PF05175	Methyltransferase small domain
THII_RS04355	PF00072	Response regulator receiver domain
THII_RS04355	PF00563	EAL domain
THII_RS04355	PF00990	GGDEF domain
THII_RS04360	PF00072	Response regulator receiver domain
THII_RS04365	PF01061	THII_RS04365
THII_RS04375	PF02016	LD-carboxypeptidase
THII_RS04380	PF00892	EamA-like transporter family
THII_RS04385	PF05685	Putative restriction endonuclease
THII_RS04395	PF05168	HEPN domain
THII_RS04400	PF03737	Demethylmenaquinone methyltransferase
THII_RS04405	PF01724	Domain of unknown function DUF29
THII_RS04415	PF05729	NACHT domain
THII_RS04420	PF00350	Dynamin family
THII_RS04425	PF00749	tRNA synthetases class I (E and Q), catalytic domain
THII_RS04450	PF01724	Domain of unknown function DUF29
THII_RS04455	PF15919	THII_RS04455
THII_RS04475	PF16576	THII_RS04475
THII_RS04480	PF00873	AcrB/AcrD/AcrF family
THII_RS04485	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
THII_RS04490	PF07007	Protein of unknown function (DUF1311)
THII_RS04495	PF00082	Subtilase family
THII_RS04500	PF00004	ATPase family associated with various cellular activities (AAA)
THII_RS04510	PF05685	Putative restriction endonuclease
THII_RS04515	PF05036	Sporulation related domain
THII_RS04515	PF13401	AAA domain
THII_RS04520	PF04325	Protein of unknown function (DUF465)
THII_RS04530	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
THII_RS04535	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
THII_RS04535	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
THII_RS04535	PF00374	Nickel-dependent hydrogenase
THII_RS04550	PF13175	AAA ATPase domain
THII_RS04550	PF13304	AAA domain
THII_RS04555	PF00072	Response regulator receiver domain
THII_RS04555	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS04555	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS04560	PF04055	Radical SAM superfamily
THII_RS04560	PF06968	Biotin and Thiamin Synthesis associated domain
THII_RS04585	PF13231	THII_RS04585
THII_RS04590	PF00884	Sulfatase
THII_RS04590	PF16347	THII_RS04590
THII_RS04595	PF04002	RadC-like JAB domain
THII_RS04600	PF02441	Flavoprotein
THII_RS04600	PF04127	DNA / pantothenate metabolism flavoprotein
THII_RS04620	PF00929	Exonuclease
THII_RS04625	PF00293	NUDIX domain
THII_RS04630	PF00072	Response regulator receiver domain
THII_RS04635	PF08242	Methyltransferase domain
THII_RS04635	PF10119	THII_RS04635
THII_RS04640	PF02666	THII_RS04640
THII_RS04655	PF07819	PGAP1-like protein
THII_RS04660	PF00072	Response regulator receiver domain
THII_RS04660	PF00196	Bacterial regulatory proteins, luxR family
THII_RS04675	PF01476	LysM domain
THII_RS04675	PF08239	Bacterial SH3 domain
THII_RS04680	PF06167	Glucose-regulated metallo-peptidase M90
THII_RS04685	PF00919	Uncharacterized protein family UPF0004
THII_RS04685	PF04055	Radical SAM superfamily
THII_RS04695	PF01502	Phosphoribosyl-AMP cyclohydrolase
THII_RS04700	PF01488	Shikimate / quinate 5-dehydrogenase
THII_RS04700	PF07896	Protein of unknown function (DUF1674)
THII_RS04700	PF08501	Shikimate dehydrogenase substrate binding domain
THII_RS04705	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
THII_RS04705	PF13181	Tetratricopeptide repeat
THII_RS04705	PF13414	TPR repeat
THII_RS04710	PF01724	Domain of unknown function DUF29
THII_RS04715	PF00092	von Willebrand factor type A domain
THII_RS04715	PF13531	Bacterial extracellular solute-binding protein
THII_RS04730	PF05685	Putative restriction endonuclease
THII_RS04745	PF02445	Quinolinate synthetase A protein
THII_RS04750	PF00271	Helicase conserved C-terminal domain
THII_RS04750	PF04851	Type III restriction enzyme, res subunit
THII_RS04755	PF00042	Globin
THII_RS04765	PF09917	Uncharacterized protein conserved in bacteria (DUF2147)
THII_RS04770	PF12146	Putative lysophospholipase
THII_RS04775	PF00072	Response regulator receiver domain
THII_RS04775	PF00196	Bacterial regulatory proteins, luxR family
THII_RS04780	PF00072	Response regulator receiver domain
THII_RS04780	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS04780	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS04785	PF01841	Transglutaminase-like superfamily
THII_RS04790	PF01882	THII_RS04790
THII_RS04795	PF07726	ATPase family associated with various cellular activities (AAA)
THII_RS04800	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
THII_RS04805	PF00849	RNA pseudouridylate synthase
THII_RS04805	PF01479	S4 domain
THII_RS04835	PF01702	Queuine tRNA-ribosyltransferase
THII_RS04840	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
THII_RS04845	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
THII_RS04845	PF10414	Sirohaem synthase dimerisation region
THII_RS04845	PF13241	Putative NAD(P)-binding
THII_RS04845	PF14824	Sirohaem biosynthesis protein central
THII_RS04850	PF01206	Sulfurtransferase TusA
THII_RS04855	PF13686	DsrE/DsrF/DrsH-like family
THII_RS04860	PF01565	FAD binding domain
THII_RS04870	PF05685	Putative restriction endonuclease
THII_RS04875	PF04932	THII_RS04875
THII_RS04885	PF10387	Protein of unknown function (DUF2442)
THII_RS04905	PF13665	THII_RS04905
THII_RS04915	PF09937	THII_RS04915
THII_RS04925	PF05954	Phage late control gene D protein (GPD)
THII_RS04925	PF06715	Gp5 C-terminal repeat (3 copies)
THII_RS04935	PF03400	THII_RS04935
THII_RS04940	PF03811	THII_RS04940
THII_RS04950	PF05936	THII_RS04950
THII_RS04960	PF12770	THII_RS04960
THII_RS04960	PF13176	Tetratricopeptide repeat
THII_RS04960	PF13181	Tetratricopeptide repeat
THII_RS04960	PF13424	Tetratricopeptide repeat
THII_RS04965	PF03160	Calx-beta domain
THII_RS04965	PF03797	Autotransporter beta-domain
THII_RS04975	PF14331	THII_RS04975
THII_RS04980	PF05591	THII_RS04980
THII_RS04985	PF05943	THII_RS04985
THII_RS04990	PF05638	Protein of unknown function (DUF796)
THII_RS05000	PF05947	THII_RS05000
THII_RS05005	PF06996	THII_RS05005
THII_RS05010	PF00004	ATPase family associated with various cellular activities (AAA)
THII_RS05010	PF07724	AAA domain (Cdc48 subfamily)
THII_RS05010	PF10431	C-terminal, D2-small domain, of ClpB protein
THII_RS05015	PF02366	THII_RS05015
THII_RS05025	PF00072	Response regulator receiver domain
THII_RS05025	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS05025	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS05055	PF04014	Antidote-toxin recognition MazE
THII_RS05060	PF00753	Metallo-beta-lactamase superfamily
THII_RS05065	PF01571	Aminomethyltransferase folate-binding domain
THII_RS05065	PF08669	Glycine cleavage T-protein C-terminal barrel domain
THII_RS05070	PF01551	Peptidase family M23
THII_RS05070	PF04225	Opacity-associated protein A LysM-like domain
THII_RS05075	PF09587	Bacterial capsule synthesis protein PGA_cap
THII_RS05080	PF00579	tRNA synthetases class I (W and Y)
THII_RS05080	PF01479	S4 domain
THII_RS05085	PF00694	Aconitase C-terminal domain
THII_RS05090	PF00180	Isocitrate/isopropylmalate dehydrogenase
THII_RS05095	PF01118	Semialdehyde dehydrogenase, NAD binding domain
THII_RS05095	PF02774	Semialdehyde dehydrogenase, dimerisation domain
THII_RS05105	PF01416	tRNA pseudouridine synthase
THII_RS05115	PF00072	Response regulator receiver domain
THII_RS05115	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS05115	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS05120	PF00731	AIR carboxylase
THII_RS05125	PF02222	ATP-grasp domain
THII_RS05130	PF01447	Thermolysin metallopeptidase, catalytic domain
THII_RS05130	PF02868	Thermolysin metallopeptidase, alpha-helical domain
THII_RS05130	PF07504	Fungalysin/Thermolysin Propeptide Motif
THII_RS05145	PF03934	Type II secretion system (T2SS), protein K
THII_RS05150	PF07963	Prokaryotic N-terminal methylation motif
THII_RS05160	PF01661	Macro domain
THII_RS05170	PF01364	Peptidase family C25
THII_RS05170	PF08126	Propeptide_C25
THII_RS05175	PF00501	AMP-binding enzyme
THII_RS05175	PF00550	Phosphopantetheine attachment site
THII_RS05175	PF00668	Condensation domain
THII_RS05175	PF00975	Thioesterase domain
THII_RS05175	PF13193	AMP-binding enzyme C-terminal domain
THII_RS05175	PF13745	HxxPF-repeated domain
THII_RS05180	PF13649	Methyltransferase domain
THII_RS05190	PF13672	Protein phosphatase 2C
THII_RS05200	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
THII_RS05205	PF01747	ATP-sulfurylase
THII_RS05205	PF14306	PUA-like domain
THII_RS05215	PF04754	THII_RS05215
THII_RS05220	PF03706	THII_RS05220
THII_RS05225	PF13489	Methyltransferase domain
THII_RS05230	PF01724	Domain of unknown function DUF29
THII_RS05235	PF01724	Domain of unknown function DUF29
THII_RS05240	PF01724	Domain of unknown function DUF29
THII_RS05245	PF01724	Domain of unknown function DUF29
THII_RS05250	PF01724	Domain of unknown function DUF29
THII_RS05270	PF00534	Glycosyl transferases group 1
THII_RS05270	PF13439	Glycosyltransferase Family 4
THII_RS05280	PF11848	THII_RS05280
THII_RS05285	PF03683	THII_RS05285
THII_RS05295	PF12784	THII_RS05295
THII_RS05325	PF01909	Nucleotidyltransferase domain
THII_RS05330	PF08780	Nucleotidyltransferase substrate binding protein like
THII_RS05335	PF01850	PIN domain
THII_RS05340	PF09957	THII_RS05340
THII_RS05355	PF01724	Domain of unknown function DUF29
THII_RS05360	PF01724	Domain of unknown function DUF29
THII_RS05365	PF00535	Glycosyl transferase family 2
THII_RS05370	PF12784	THII_RS05370
THII_RS05375	PF08242	Methyltransferase domain
THII_RS05385	PF04754	THII_RS05385
THII_RS05405	PF00583	Acetyltransferase (GNAT) family
THII_RS05405	PF13380	CoA binding domain
THII_RS05405	PF13549	ATP-grasp domain
THII_RS05405	PF13607	Succinyl-CoA ligase like flavodoxin domain
THII_RS05415	PF01797	Transposase IS200 like
THII_RS05420	PF16694	THII_RS05420
THII_RS05425	PF04452	RNA methyltransferase
THII_RS05430	PF00202	Aminotransferase class-III
THII_RS05440	PF01223	DNA/RNA non-specific endonuclease
THII_RS05450	PF13304	AAA domain
THII_RS05455	PF14103	THII_RS05455
THII_RS05460	PF00535	Glycosyl transferase family 2
THII_RS05460	PF13847	Methyltransferase domain
THII_RS05465	PF13650	Aspartyl protease
THII_RS05470	PF08241	Methyltransferase domain
THII_RS05475	PF05050	Methyltransferase FkbM domain
THII_RS05490	PF00582	Universal stress protein family
THII_RS05490	PF01925	THII_RS05490
THII_RS05505	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS05505	PF00672	HAMP domain
THII_RS05505	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS05510	PF00072	Response regulator receiver domain
THII_RS05510	PF00158	Sigma-54 interaction domain
THII_RS05510	PF02954	Bacterial regulatory protein, Fis family
THII_RS05530	PF00092	von Willebrand factor type A domain
THII_RS05540	PF00069	Protein kinase domain
THII_RS05560	PF02230	Phospholipase/Carboxylesterase
THII_RS05565	PF00483	Nucleotidyl transferase
THII_RS05575	PF05685	Putative restriction endonuclease
THII_RS05580	PF05685	Putative restriction endonuclease
THII_RS05585	PF05685	Putative restriction endonuclease
THII_RS05590	PF13186	Iron-sulfur cluster-binding domain
THII_RS05595	PF00535	Glycosyl transferase family 2
THII_RS05595	PF13578	Methyltransferase domain
THII_RS05600	PF00535	Glycosyl transferase family 2
THII_RS05600	PF13692	Glycosyl transferases group 1
THII_RS05605	PF00535	Glycosyl transferase family 2
THII_RS05610	PF13489	Methyltransferase domain
THII_RS05620	PF01385	THII_RS05620
THII_RS05620	PF07282	THII_RS05620
THII_RS05620	PF12323	THII_RS05620
THII_RS05625	PF14269	THII_RS05625
THII_RS05630	PF00239	Resolvase, N terminal domain
THII_RS05630	PF00376	MerR family regulatory protein
THII_RS05635	PF01385	THII_RS05635
THII_RS05635	PF07282	THII_RS05635
THII_RS05635	PF12323	THII_RS05635
THII_RS05640	PF09626	Dihaem cytochrome c
THII_RS05645	PF09086	Domain of unknown function (DUF1924)
THII_RS05655	PF00571	CBS domain
THII_RS05655	PF01769	Divalent cation transporter
THII_RS05655	PF03448	MgtE intracellular N domain
THII_RS05660	PF01553	Acyltransferase
THII_RS05665	PF01928	CYTH domain
THII_RS05665	PF05235	CHAD domain
THII_RS05670	PF01266	FAD dependent oxidoreductase
THII_RS05675	PF07788	THII_RS05675
THII_RS05675	PF12644	THII_RS05675
THII_RS05680	PF08357	SEFIR domain
THII_RS05690	PF01078	Magnesium chelatase, subunit ChlI
THII_RS05690	PF13335	THII_RS05690
THII_RS05690	PF13541	Subunit ChlI of Mg-chelatase
THII_RS05695	PF04380	THII_RS05695
THII_RS05700	PF02677	THII_RS05700
THII_RS05715	PF02472	Biopolymer transport protein ExbD/TolR
THII_RS05720	PF01618	THII_RS05720
THII_RS05725	PF06537	THII_RS05725
THII_RS05740	PF01850	PIN domain
THII_RS05745	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
THII_RS05755	PF00132	Bacterial transferase hexapeptide (six repeats)
THII_RS05755	PF14602	Hexapeptide repeat of succinyl-transferase
THII_RS05755	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
THII_RS05760	PF00155	Aminotransferase class I and II
THII_RS05765	PF02576	Uncharacterised BCR, YhbC family COG0779
THII_RS05770	PF00575	S1 RNA binding domain
THII_RS05770	PF08529	NusA N-terminal domain
THII_RS05770	PF13184	NusA-like KH domain
THII_RS05770	PF14520	Helix-hairpin-helix domain
THII_RS05775	PF00009	Elongation factor Tu GTP binding domain
THII_RS05775	PF03144	Elongation factor Tu domain 2
THII_RS05775	PF04760	Translation initiation factor IF-2, N-terminal region
THII_RS05775	PF08364	THII_RS05775
THII_RS05775	PF11987	Translation-initiation factor 2
THII_RS05780	PF02033	Ribosome-binding factor A
THII_RS05785	PF01509	TruB family pseudouridylate synthase (N terminal domain)
THII_RS05785	PF09157	Pseudouridine synthase II TruB, C-terminal
THII_RS05785	PF16198	THII_RS05785
THII_RS05790	PF00312	Ribosomal protein S15
THII_RS05795	PF00013	KH domain
THII_RS05795	PF00575	S1 RNA binding domain
THII_RS05795	PF01138	3' exoribonuclease family, domain 1
THII_RS05795	PF03725	3' exoribonuclease family, domain 2
THII_RS05795	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
THII_RS05800	PF08780	Nucleotidyltransferase substrate binding protein like
THII_RS05805	PF01909	Nucleotidyltransferase domain
THII_RS05835	PF00989	PAS fold
THII_RS05835	PF00990	GGDEF domain
THII_RS05835	PF13426	PAS domain
THII_RS05845	PF00072	Response regulator receiver domain
THII_RS05845	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS05845	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS05855	PF10023	THII_RS05855
THII_RS05865	PF00953	Glycosyl transferase family 4
THII_RS05865	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
THII_RS05870	PF01225	Mur ligase family, catalytic domain
THII_RS05870	PF02875	Mur ligase family, glutamate ligase domain
THII_RS05870	PF08245	Mur ligase middle domain
THII_RS05875	PF01225	Mur ligase family, catalytic domain
THII_RS05875	PF02875	Mur ligase family, glutamate ligase domain
THII_RS05875	PF08245	Mur ligase middle domain
THII_RS05880	PF04999	THII_RS05880
THII_RS05885	PF01795	MraW methylase family
THII_RS05890	PF00795	Carbon-nitrogen hydrolase
THII_RS05905	PF00528	Binding-protein-dependent transport system inner membrane component
THII_RS05910	PF00005	ABC transporter
THII_RS05910	PF03459	TOBE domain
THII_RS05915	PF08495	THII_RS05915
THII_RS05915	PF10442	THII_RS05915
THII_RS05925	PF02355	Protein export membrane protein
THII_RS05925	PF07549	SecD/SecF GG Motif
THII_RS05930	PF02355	Protein export membrane protein
THII_RS05930	PF07549	SecD/SecF GG Motif
THII_RS05930	PF13721	SecD export protein N-terminal TM region
THII_RS05935	PF02699	Preprotein translocase subunit
THII_RS05940	PF00291	Pyridoxal-phosphate dependent enzyme
THII_RS05945	PF05685	Putative restriction endonuclease
THII_RS05950	PF00204	DNA gyrase B
THII_RS05950	PF00986	DNA gyrase B subunit, carboxyl terminus
THII_RS05950	PF01751	Toprim domain
THII_RS05950	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS05970	PF00270	DEAD/DEAH box helicase
THII_RS05970	PF00271	Helicase conserved C-terminal domain
THII_RS05970	PF00570	HRDC domain
THII_RS05970	PF09382	RQC domain
THII_RS05970	PF16124	THII_RS05970
THII_RS05975	PF04235	THII_RS05975
THII_RS05980	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
THII_RS05980	PF02874	ATP synthase alpha/beta family, beta-barrel domain
THII_RS05980	PF16886	THII_RS05980
THII_RS05985	PF01991	ATP synthase (E/31 kDa) subunit
THII_RS05990	PF01990	ATP synthase (F/14-kDa) subunit
THII_RS05995	PF00137	ATP synthase subunit C
THII_RS06000	PF01496	V-type ATPase 116kDa subunit family
THII_RS06005	PF00535	Glycosyl transferase family 2
THII_RS06010	PF07578	Lipid A Biosynthesis N-terminal domain
THII_RS06015	PF13231	THII_RS06015
THII_RS06020	PF09712	THII_RS06020
THII_RS06035	PF00561	alpha/beta hydrolase fold
THII_RS06040	PF13649	Methyltransferase domain
THII_RS06045	PF00933	Glycosyl hydrolase family 3 N terminal domain
THII_RS06055	PF09414	RNA ligase
THII_RS06060	PF01207	Dihydrouridine synthase (Dus)
THII_RS06065	PF00588	SpoU rRNA Methylase family
THII_RS06065	PF08032	RNA 2'-O ribose methyltransferase substrate binding
THII_RS06070	PF09225	Restriction endonuclease PvuII
THII_RS06080	PF01555	DNA methylase
THII_RS06085	PF00072	Response regulator receiver domain
THII_RS06085	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS06085	PF00672	HAMP domain
THII_RS06085	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS06085	PF12729	THII_RS06085
THII_RS06085	PF13185	GAF domain
THII_RS06090	PF00672	HAMP domain
THII_RS06090	PF02743	Cache domain
THII_RS06090	PF13185	GAF domain
THII_RS06095	PF01368	DHH family
THII_RS06095	PF02272	DHHA1 domain
THII_RS06100	PF00534	Glycosyl transferases group 1
THII_RS06100	PF02585	GlcNAc-PI de-N-acetylase
THII_RS06110	PF11143	THII_RS06110
THII_RS06115	PF00291	Pyridoxal-phosphate dependent enzyme
THII_RS06115	PF00585	C-terminal regulatory domain of Threonine dehydratase
THII_RS06120	PF14489	QueF-like protein
THII_RS06125	PF02603	HPr Serine kinase N terminus
THII_RS06125	PF07475	HPr Serine kinase C-terminal domain
THII_RS06130	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
THII_RS06135	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
THII_RS06140	PF00309	THII_RS06140
THII_RS06140	PF04552	Sigma-54, DNA binding domain
THII_RS06140	PF04963	Sigma-54 factor, core binding domain
THII_RS06145	PF00005	ABC transporter
THII_RS06145	PF12399	Branched-chain amino acid ATP-binding cassette transporter
THII_RS06150	PF03968	OstA-like protein
THII_RS06155	PF06835	Lipopolysaccharide-assembly, LptC-related
THII_RS06160	PF08282	haloacid dehalogenase-like hydrolase
THII_RS06165	PF00571	CBS domain
THII_RS06165	PF01380	SIS domain
THII_RS06175	PF13358	DDE superfamily endonuclease
THII_RS06180	PF01710	Transposase
THII_RS06200	PF08241	Methyltransferase domain
THII_RS06205	PF04055	Radical SAM superfamily
THII_RS06205	PF13186	Iron-sulfur cluster-binding domain
THII_RS06205	PF13394	4Fe-4S single cluster domain
THII_RS06210	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
THII_RS06215	PF00152	tRNA synthetases class II (D, K and N)
THII_RS06220	PF00814	Glycoprotease family
THII_RS06225	PF00476	DNA polymerase family A
THII_RS06225	PF01367	5'-3' exonuclease, C-terminal SAM fold
THII_RS06225	PF01612	3'-5' exonuclease
THII_RS06225	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
THII_RS06235	PF03934	Type II secretion system (T2SS), protein K
THII_RS06240	PF04321	RmlD substrate binding domain
THII_RS06245	PF03412	Peptidase C39 family
THII_RS06250	PF01370	NAD dependent epimerase/dehydratase family
THII_RS06255	PF13580	SIS domain
THII_RS06260	PF01464	Transglycosylase SLT domain
THII_RS06265	PF01208	Uroporphyrinogen decarboxylase (URO-D)
THII_RS06280	PF01515	Phosphate acetyl/butaryl transferase
THII_RS06280	PF01575	MaoC like domain
THII_RS06290	PF00072	Response regulator receiver domain
THII_RS06290	PF01584	CheW-like domain
THII_RS06290	PF01627	Hpt domain
THII_RS06290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS06300	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS06305	PF01584	CheW-like domain
THII_RS06310	PF00072	Response regulator receiver domain
THII_RS06315	PF00072	Response regulator receiver domain
THII_RS06325	PF08886	Glutamate-cysteine ligase
THII_RS06335	PF03029	Conserved hypothetical ATP binding protein
THII_RS06345	PF00071	Ras family
THII_RS06350	PF02674	THII_RS06350
THII_RS06355	PF00156	Phosphoribosyl transferase domain
THII_RS06355	PF13522	Glutamine amidotransferase domain
THII_RS06360	PF01053	Cys/Met metabolism PLP-dependent enzyme
THII_RS06370	PF07167	THII_RS06370
THII_RS06375	PF00773	RNB domain
THII_RS06385	PF00994	Probable molybdopterin binding domain
THII_RS06390	PF00111	2Fe-2S iron-sulfur cluster binding domain
THII_RS06390	PF00970	Oxidoreductase FAD-binding domain
THII_RS06400	PF03739	THII_RS06400
THII_RS06405	PF00883	Cytosol aminopeptidase family, catalytic domain
THII_RS06405	PF02789	Cytosol aminopeptidase family, N-terminal domain
THII_RS06410	PF04364	DNA polymerase III chi subunit, HolC
THII_RS06415	PF14239	THII_RS06415
THII_RS06415	PF14279	THII_RS06415
THII_RS06425	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
THII_RS06425	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
THII_RS06425	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
THII_RS06425	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
THII_RS06430	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
THII_RS06430	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
THII_RS06430	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
THII_RS06430	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
THII_RS06440	PF02687	THII_RS06440
THII_RS06440	PF12704	MacB-like periplasmic core domain
THII_RS06445	PF00005	ABC transporter
THII_RS06450	PF07788	THII_RS06450
THII_RS06450	PF12644	THII_RS06450
THII_RS06455	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS06460	PF01008	Initiation factor 2 subunit family
THII_RS06470	PF04348	LppC putative lipoprotein
THII_RS06475	PF02021	Uncharacterised protein family UPF0102
THII_RS06480	PF00005	ABC transporter
THII_RS06490	PF02493	MORN repeat
THII_RS06500	PF01435	Peptidase family M48
THII_RS06505	PF02563	Polysaccharide biosynthesis/export protein
THII_RS06505	PF10531	SLBB domain
THII_RS06510	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
THII_RS06515	PF07690	Major Facilitator Superfamily
THII_RS06520	PF00436	Single-strand binding protein family
THII_RS06525	PF01725	Ham1 family
THII_RS06530	PF00929	Exonuclease
THII_RS06535	PF00293	NUDIX domain
THII_RS06540	PF00977	Histidine biosynthesis protein
THII_RS06545	PF00977	Histidine biosynthesis protein
THII_RS06550	PF04366	THII_RS06550
THII_RS06555	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
THII_RS06560	PF04366	THII_RS06560
THII_RS06565	PF11969	Scavenger mRNA decapping enzyme C-term binding
THII_RS06570	PF02416	mttA/Hcf106 family
THII_RS06575	PF02416	mttA/Hcf106 family
THII_RS06580	PF00902	Sec-independent protein translocase protein (TatC)
THII_RS06595	PF05685	Putative restriction endonuclease
THII_RS06600	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
THII_RS06605	PF00483	Nucleotidyl transferase
THII_RS06610	PF16363	THII_RS06610
THII_RS06615	PF01724	Domain of unknown function DUF29
THII_RS06630	PF00873	AcrB/AcrD/AcrF family
THII_RS06640	PF04572	THII_RS06640
THII_RS06650	PF13175	AAA ATPase domain
THII_RS06660	PF04255	Protein of unknown function (DUF433)
THII_RS06665	PF01710	Transposase
THII_RS06675	PF13358	DDE superfamily endonuclease
THII_RS06695	PF00072	Response regulator receiver domain
THII_RS06695	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS06700	PF03435	Saccharopine dehydrogenase
THII_RS06705	PF00348	Polyprenyl synthetase
THII_RS06710	PF01738	Dienelactone hydrolase family
THII_RS06715	PF01551	Peptidase family M23
THII_RS06740	PF00199	Catalase
THII_RS06740	PF06628	Catalase-related immune-responsive
THII_RS06745	PF04892	THII_RS06745
THII_RS06750	PF01252	THII_RS06750
THII_RS06755	PF00133	tRNA synthetases class I (I, L, M and V)
THII_RS06755	PF06827	Zinc finger found in FPG and IleRS
THII_RS06755	PF08264	Anticodon-binding domain of tRNA
THII_RS06760	PF01043	SecA preprotein cross-linking domain
THII_RS06760	PF02810	SEC-C motif
THII_RS06760	PF07516	SecA Wing and Scaffold domain
THII_RS06760	PF07517	SecA DEAD-like domain
THII_RS06765	PF01960	ArgJ family
THII_RS06770	PF00293	NUDIX domain
THII_RS06770	PF02581	Thiamine monophosphate synthase/TENI
THII_RS06775	PF07883	Cupin domain
THII_RS06780	PF00535	Glycosyl transferase family 2
THII_RS06800	PF00581	Rhodanese-like domain
THII_RS06810	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
THII_RS06820	PF00528	Binding-protein-dependent transport system inner membrane component
THII_RS06825	PF00528	Binding-protein-dependent transport system inner membrane component
THII_RS06825	PF12911	THII_RS06825
THII_RS06835	PF00072	Response regulator receiver domain
THII_RS06835	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS06835	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS06835	PF03924	CHASE domain
THII_RS06835	PF08447	PAS fold
THII_RS06835	PF08448	PAS fold
THII_RS06835	PF13188	PAS domain
THII_RS06835	PF13426	PAS domain
THII_RS06840	PF00072	Response regulator receiver domain
THII_RS06840	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS06840	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS06845	PF00334	Nucleoside diphosphate kinase
THII_RS06850	PF04055	Radical SAM superfamily
THII_RS06855	PF13432	Tetratricopeptide repeat
THII_RS06855	PF14559	Tetratricopeptide repeat
THII_RS06860	PF13413	Helix-turn-helix domain
THII_RS06860	PF13464	THII_RS06860
THII_RS06865	PF04551	GcpE protein
THII_RS06875	PF01738	Dienelactone hydrolase family
THII_RS06880	PF01967	MoaC family
THII_RS06885	PF09360	Iron-binding zinc finger CDGSH type
THII_RS06890	PF00270	DEAD/DEAH box helicase
THII_RS06890	PF00271	Helicase conserved C-terminal domain
THII_RS06895	PF03235	THII_RS06895
THII_RS06895	PF07510	THII_RS06895
THII_RS06900	PF05685	Putative restriction endonuclease
THII_RS06905	PF13380	CoA binding domain
THII_RS06915	PF01411	tRNA synthetases class II (A)
THII_RS06915	PF02272	DHHA1 domain
THII_RS06915	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
THII_RS06920	PF02631	RecX family
THII_RS06925	PF00154	recA bacterial DNA recombination protein
THII_RS06925	PF14890	Intein splicing domain
THII_RS06930	PF01364	Peptidase family C25
THII_RS06930	PF08126	Propeptide_C25
THII_RS06950	PF00122	E1-E2 ATPase
THII_RS06955	PF06097	THII_RS06955
THII_RS06960	PF00291	Pyridoxal-phosphate dependent enzyme
THII_RS06970	PF13540	Regulator of chromosome condensation (RCC1) repeat
THII_RS06975	PF13540	Regulator of chromosome condensation (RCC1) repeat
THII_RS06980	PF01176	Translation initiation factor 1A / IF-1
THII_RS06985	PF01451	Low molecular weight phosphotyrosine protein phosphatase
THII_RS06990	PF03966	Trm112p-like protein
THII_RS06995	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
THII_RS07000	PF02472	Biopolymer transport protein ExbD/TolR
THII_RS07005	PF01618	THII_RS07005
THII_RS07010	PF00586	AIR synthase related protein, N-terminal domain
THII_RS07010	PF02769	AIR synthase related protein, C-terminal domain
THII_RS07015	PF00999	Sodium/hydrogen exchanger family
THII_RS07025	PF13511	THII_RS07025
THII_RS07030	PF03625	Domain of unknown function DUF302
THII_RS07035	PF10119	THII_RS07035
THII_RS07035	PF13847	Methyltransferase domain
THII_RS07050	PF00152	tRNA synthetases class II (D, K and N)
THII_RS07050	PF01336	OB-fold nucleic acid binding domain
THII_RS07050	PF02938	GAD domain
THII_RS07055	PF09723	THII_RS07055
THII_RS07065	PF00342	Phosphoglucose isomerase
THII_RS07070	PF02446	4-alpha-glucanotransferase
THII_RS07075	PF03065	Glycosyl hydrolase family 57
THII_RS07080	PF00483	Nucleotidyl transferase
THII_RS07085	PF00171	Aldehyde dehydrogenase family
THII_RS07095	PF09826	THII_RS07095
THII_RS07120	PF02624	YcaO-like family
THII_RS07125	PF04909	Amidohydrolase
THII_RS07130	PF00069	Protein kinase domain
THII_RS07130	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS07130	PF01590	GAF domain
THII_RS07130	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS07130	PF13191	AAA ATPase domain
THII_RS07135	PF00072	Response regulator receiver domain
THII_RS07135	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS07140	PF04342	THII_RS07140
THII_RS07145	PF00300	Histidine phosphatase superfamily (branch 1)
THII_RS07150	PF03372	Endonuclease/Exonuclease/phosphatase family
THII_RS07155	PF00675	Insulinase (Peptidase family M16)
THII_RS07155	PF05193	Peptidase M16 inactive domain
THII_RS07160	PF00675	Insulinase (Peptidase family M16)
THII_RS07160	PF05193	Peptidase M16 inactive domain
THII_RS07175	PF00924	Mechanosensitive ion channel
THII_RS07180	PF03625	Domain of unknown function DUF302
THII_RS07185	PF02779	Transketolase, pyrimidine binding domain
THII_RS07185	PF02780	Transketolase, C-terminal domain
THII_RS07185	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
THII_RS07190	PF02649	Type I GTP cyclohydrolase folE2
THII_RS07195	PF02578	Multi-copper polyphenol oxidoreductase laccase
THII_RS07205	PF01435	Peptidase family M48
THII_RS07210	PF05170	THII_RS07210
THII_RS07215	PF11612	Type II secretion system (T2SS), protein J
THII_RS07215	PF13633	Prokaryotic N-terminal methylation site
THII_RS07220	PF00085	Thioredoxin
THII_RS07225	PF04055	Radical SAM superfamily
THII_RS07225	PF16881	THII_RS07225
THII_RS07230	PF03099	Biotin/lipoate A/B protein ligase family
THII_RS07235	PF03350	THII_RS07235
THII_RS07240	PF13186	Iron-sulfur cluster-binding domain
THII_RS07245	PF05685	Putative restriction endonuclease
THII_RS07260	PF03734	L,D-transpeptidase catalytic domain
THII_RS07265	PF00440	Bacterial regulatory proteins, tetR family
THII_RS07270	PF16576	THII_RS07270
THII_RS07275	PF00873	AcrB/AcrD/AcrF family
THII_RS07285	PF00270	DEAD/DEAH box helicase
THII_RS07290	PF13855	Leucine rich repeat
THII_RS07300	PF02597	ThiS family
THII_RS07310	PF00166	Chaperonin 10 Kd subunit
THII_RS07315	PF00118	TCP-1/cpn60 chaperonin family
THII_RS07320	PF01040	UbiA prenyltransferase family
THII_RS07330	PF00462	Glutaredoxin
THII_RS07335	PF01053	Cys/Met metabolism PLP-dependent enzyme
THII_RS07340	PF02824	TGS domain
THII_RS07340	PF04607	Region found in RelA / SpoT proteins
THII_RS07340	PF13291	ACT domain
THII_RS07340	PF13328	HD domain
THII_RS07345	PF00931	NB-ARC domain
THII_RS07360	PF01936	NYN domain
THII_RS07360	PF12872	OST-HTH/LOTUS domain
THII_RS07365	PF00034	Cytochrome c
THII_RS07365	PF03150	Di-haem cytochrome c peroxidase
THII_RS07370	PF08263	Leucine rich repeat N-terminal domain
THII_RS07375	PF05860	haemagglutination activity domain
THII_RS07380	PF00005	ABC transporter
THII_RS07380	PF00664	ABC transporter transmembrane region
THII_RS07390	PF10282	Lactonase, 7-bladed beta-propeller
THII_RS07395	PF01650	Peptidase C13 family
THII_RS07395	PF03160	Calx-beta domain
THII_RS07395	PF05345	Putative Ig domain
THII_RS07395	PF10282	Lactonase, 7-bladed beta-propeller
THII_RS07400	PF08780	Nucleotidyltransferase substrate binding protein like
THII_RS07405	PF01909	Nucleotidyltransferase domain
THII_RS07415	PF04168	THII_RS07415
THII_RS07420	PF14403	THII_RS07420
THII_RS07430	PF01435	Peptidase family M48
THII_RS07435	PF13419	Haloacid dehalogenase-like hydrolase
THII_RS07440	PF00069	Protein kinase domain
THII_RS07440	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS07440	PF01590	GAF domain
THII_RS07440	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS07440	PF13191	AAA ATPase domain
THII_RS07450	PF05899	Protein of unknown function (DUF861)
THII_RS07460	PF01963	THII_RS07460
THII_RS07470	PF01797	Transposase IS200 like
THII_RS07475	PF00374	Nickel-dependent hydrogenase
THII_RS07480	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
THII_RS07485	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
THII_RS07485	PF13459	4Fe-4S single cluster domain
THII_RS07485	PF13510	2Fe-2S iron-sulfur cluster binding domain
THII_RS07490	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
THII_RS07490	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
THII_RS07490	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
THII_RS07495	PF04052	TolB amino-terminal domain
THII_RS07495	PF07676	WD40-like Beta Propeller Repeat
THII_RS07510	PF02472	Biopolymer transport protein ExbD/TolR
THII_RS07515	PF01618	THII_RS07515
THII_RS07520	PF03061	Thioesterase superfamily
THII_RS07525	PF05491	Holliday junction DNA helicase ruvB C-terminus
THII_RS07525	PF05496	Holliday junction DNA helicase ruvB N-terminus
THII_RS07530	PF00034	Cytochrome c
THII_RS07535	PF01323	DSBA-like thioredoxin domain
THII_RS07550	PF01042	Endoribonuclease L-PSP
THII_RS07555	PF00270	DEAD/DEAH box helicase
THII_RS07555	PF00271	Helicase conserved C-terminal domain
THII_RS07555	PF17191	THII_RS07555
THII_RS07560	PF03625	Domain of unknown function DUF302
THII_RS07565	PF02397	THII_RS07565
THII_RS07565	PF13727	CoA-binding domain
THII_RS07575	PF00072	Response regulator receiver domain
THII_RS07575	PF00990	GGDEF domain
THII_RS07580	PF00474	Sodium:solute symporter family
THII_RS07585	PF00849	RNA pseudouridylate synthase
THII_RS07585	PF01479	S4 domain
THII_RS07590	PF13525	Outer membrane lipoprotein
THII_RS07600	PF01432	Peptidase family M3
THII_RS07605	PF00343	Carbohydrate phosphorylase
THII_RS07610	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
THII_RS07615	PF00146	NADH dehydrogenase
THII_RS07625	PF12784	THII_RS07625
THII_RS07640	PF00501	AMP-binding enzyme
THII_RS07640	PF13193	AMP-binding enzyme C-terminal domain
THII_RS07640	PF16177	THII_RS07640
THII_RS07645	PF03160	Calx-beta domain
THII_RS07665	PF05685	Putative restriction endonuclease
THII_RS07670	PF04982	THII_RS07670
THII_RS07675	PF00403	Heavy-metal-associated domain
THII_RS07680	PF02548	Ketopantoate hydroxymethyltransferase
THII_RS07685	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
THII_RS07690	PF01743	Poly A polymerase head domain
THII_RS07690	PF12626	Polymerase A arginine-rich C-terminus
THII_RS07690	PF12627	Probable RNA and SrmB- binding site of polymerase A
THII_RS07695	PF00830	Ribosomal L28 family
THII_RS07700	PF00132	Bacterial transferase hexapeptide (six repeats)
THII_RS07705	PF02634	FdhD/NarQ family
THII_RS07710	PF04055	Radical SAM superfamily
THII_RS07710	PF06463	Molybdenum Cofactor Synthesis C
THII_RS07710	PF13353	4Fe-4S single cluster domain
THII_RS07715	PF10119	THII_RS07715
THII_RS07715	PF13847	Methyltransferase domain
THII_RS07720	PF00072	Response regulator receiver domain
THII_RS07720	PF00486	Transcriptional regulatory protein, C terminal
THII_RS07725	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS07725	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS07725	PF02702	Osmosensitive K+ channel His kinase sensor domain
THII_RS07725	PF13492	GAF domain
THII_RS07725	PF13493	Domain of unknown function (DUF4118)
THII_RS07735	PF01650	Peptidase C13 family
THII_RS07735	PF07494	Two component regulator propeller
THII_RS07745	PF01743	Poly A polymerase head domain
THII_RS07745	PF01966	HD domain
THII_RS07745	PF12627	Probable RNA and SrmB- binding site of polymerase A
THII_RS07750	PF01370	NAD dependent epimerase/dehydratase family
THII_RS07755	PF02872	5'-nucleotidase, C-terminal domain
THII_RS07760	PF08770	Sulphur oxidation protein SoxZ
THII_RS07765	PF13501	Sulfur oxidation protein SoxY
THII_RS07770	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
THII_RS07775	PF02486	THII_RS07775
THII_RS07785	PF00072	Response regulator receiver domain
THII_RS07785	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS07790	PF00497	Bacterial extracellular solute-binding proteins, family 3
THII_RS07795	PF00672	HAMP domain
THII_RS07795	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS07805	PF13665	THII_RS07805
THII_RS07805	PF15635	THII_RS07805
THII_RS07810	PF08263	Leucine rich repeat N-terminal domain
THII_RS07815	PF02661	Fic/DOC family
THII_RS07820	PF01724	Domain of unknown function DUF29
THII_RS07825	PF03109	THII_RS07825
THII_RS07830	PF02036	SCP-2 sterol transfer family
THII_RS07840	PF01209	ubiE/COQ5 methyltransferase family
THII_RS07845	PF06155	Protein of unknown function (DUF971)
THII_RS07850	PF00004	ATPase family associated with various cellular activities (AAA)
THII_RS07850	PF07724	AAA domain (Cdc48 subfamily)
THII_RS07855	PF00227	Proteasome subunit
THII_RS07860	PF01636	Phosphotransferase enzyme family
THII_RS07865	PF03641	Possible lysine decarboxylase
THII_RS07870	PF11906	THII_RS07870
THII_RS07870	PF13719	THII_RS07870
THII_RS07875	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
THII_RS07880	PF00877	NlpC/P60 family
THII_RS07880	PF12912	NLPC_P60 stabilising domain, N term
THII_RS07880	PF12913	SH3 domain of the SH3b1 type
THII_RS07880	PF12914	SH3 domain of SH3b2 type
THII_RS07890	PF00005	ABC transporter
THII_RS07890	PF00664	ABC transporter transmembrane region
THII_RS07890	PF03412	Peptidase C39 family
THII_RS07915	PF00132	Bacterial transferase hexapeptide (six repeats)
THII_RS07925	PF04255	Protein of unknown function (DUF433)
THII_RS07935	PF00115	Cytochrome C and Quinol oxidase polypeptide I
THII_RS07940	PF02433	Cytochrome C oxidase, mono-heme subunit/FixO
THII_RS07945	PF05545	THII_RS07945
THII_RS07950	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
THII_RS07950	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP
THII_RS07955	PF02554	THII_RS07955
THII_RS07955	PF13722	THII_RS07955
THII_RS07960	PF04328	THII_RS07960
THII_RS07965	PF05866	Endodeoxyribonuclease RusA
THII_RS07975	PF10130	THII_RS07975
THII_RS07980	PF00072	Response regulator receiver domain
THII_RS07980	PF00486	Transcriptional regulatory protein, C terminal
THII_RS07985	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS07985	PF00672	HAMP domain
THII_RS07985	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS07990	PF14358	THII_RS07990
THII_RS07995	PF13202	EF hand
THII_RS08005	PF00691	OmpA family
THII_RS08010	PF00071	Ras family
THII_RS08015	PF00072	Response regulator receiver domain
THII_RS08015	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS08015	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS08025	PF01808	AICARFT/IMPCHase bienzyme
THII_RS08025	PF02142	MGS-like domain
THII_RS08030	PF00459	Inositol monophosphatase family
THII_RS08035	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
THII_RS08050	PF13540	Regulator of chromosome condensation (RCC1) repeat
THII_RS08055	PF13641	Glycosyltransferase like family 2
THII_RS08065	PF04230	THII_RS08065
THII_RS08070	PF00685	Sulfotransferase domain
THII_RS08075	PF13649	Methyltransferase domain
THII_RS08080	PF04230	THII_RS08080
THII_RS08085	PF04230	THII_RS08085
THII_RS08090	PF01565	FAD binding domain
THII_RS08095	PF13489	Methyltransferase domain
THII_RS08100	PF01370	NAD dependent epimerase/dehydratase family
THII_RS08110	PF13540	Regulator of chromosome condensation (RCC1) repeat
THII_RS08120	PF04230	THII_RS08120
THII_RS08125	PF04230	THII_RS08125
THII_RS08130	PF00881	Nitroreductase family
THII_RS08145	PF00535	Glycosyl transferase family 2
THII_RS08155	PF14238	THII_RS08155
THII_RS08160	PF09822	THII_RS08160
THII_RS08165	PF12679	THII_RS08165
THII_RS08170	PF00005	ABC transporter
THII_RS08175	PF00005	ABC transporter
THII_RS08175	PF00664	ABC transporter transmembrane region
THII_RS08180	PF01724	Domain of unknown function DUF29
THII_RS08200	PF01724	Domain of unknown function DUF29
THII_RS08205	PF00384	Molybdopterin oxidoreductase
THII_RS08210	PF13247	4Fe-4S dicluster domain
THII_RS08215	PF09459	Ethylbenzene dehydrogenase
THII_RS08245	PF14261	THII_RS08245
THII_RS08250	PF12799	Leucine Rich repeats (2 copies)
THII_RS08265	PF01578	THII_RS08265
THII_RS08275	PF09851	THII_RS08275
THII_RS08280	PF00675	Insulinase (Peptidase family M16)
THII_RS08280	PF05193	Peptidase M16 inactive domain
THII_RS08280	PF08367	Peptidase M16C associated
THII_RS08285	PF00092	von Willebrand factor type A domain
THII_RS08300	PF07992	Pyridine nucleotide-disulphide oxidoreductase
THII_RS08300	PF09242	Flavocytochrome c sulphide dehydrogenase, flavin-binding
THII_RS08310	PF12796	Ankyrin repeats (3 copies)
THII_RS08315	PF03264	NapC/NirT cytochrome c family, N-terminal region
THII_RS08320	PF00483	Nucleotidyl transferase
THII_RS08325	PF16363	THII_RS08325
THII_RS08330	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
THII_RS08335	PF01370	NAD dependent epimerase/dehydratase family
THII_RS08340	PF16363	THII_RS08340
THII_RS08350	PF00535	Glycosyl transferase family 2
THII_RS08355	PF00535	Glycosyl transferase family 2
THII_RS08360	PF01943	THII_RS08360
THII_RS08365	PF00685	Sulfotransferase domain
THII_RS08375	PF05050	Methyltransferase FkbM domain
THII_RS08380	PF00535	Glycosyl transferase family 2
THII_RS08385	PF00534	Glycosyl transferases group 1
THII_RS08390	PF00534	Glycosyl transferases group 1
THII_RS08390	PF13579	Glycosyl transferase 4-like domain
THII_RS08395	PF00132	Bacterial transferase hexapeptide (six repeats)
THII_RS08400	PF13489	Methyltransferase domain
THII_RS08405	PF00535	Glycosyl transferase family 2
THII_RS08410	PF04055	Radical SAM superfamily
THII_RS08410	PF13186	Iron-sulfur cluster-binding domain
THII_RS08410	PF13353	4Fe-4S single cluster domain
THII_RS08415	PF00534	Glycosyl transferases group 1
THII_RS08415	PF13579	Glycosyl transferase 4-like domain
THII_RS08420	PF01975	Survival protein SurE
THII_RS08425	PF02754	THII_RS08425
THII_RS08425	PF13183	4Fe-4S dicluster domain
THII_RS08430	PF08240	Alcohol dehydrogenase GroES-like domain
THII_RS08430	PF13602	Zinc-binding dehydrogenase
THII_RS08435	PF13563	2'-5' RNA ligase superfamily
THII_RS08445	PF07992	Pyridine nucleotide-disulphide oxidoreductase
THII_RS08450	PF00482	Type II secretion system (T2SS), protein F
THII_RS08460	PF12784	THII_RS08460
THII_RS08470	PF06051	THII_RS08470
THII_RS08480	PF13086	AAA domain
THII_RS08480	PF13087	AAA domain
THII_RS08480	PF13195	THII_RS08480
THII_RS08480	PF13245	Part of AAA domain
THII_RS08495	PF14213	THII_RS08495
THII_RS08510	PF02684	THII_RS08510
THII_RS08515	PF00132	Bacterial transferase hexapeptide (six repeats)
THII_RS08515	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
THII_RS08520	PF07977	FabA-like domain
THII_RS08525	PF00132	Bacterial transferase hexapeptide (six repeats)
THII_RS08525	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
THII_RS08530	PF03938	Outer membrane protein (OmpH-like)
THII_RS08535	PF01103	Surface antigen
THII_RS08535	PF07244	Surface antigen variable number repeat
THII_RS08540	PF02163	Peptidase family M50
THII_RS08545	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
THII_RS08545	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
THII_RS08545	PF13288	DXP reductoisomerase C-terminal domain
THII_RS08550	PF01148	Cytidylyltransferase family
THII_RS08555	PF01255	Putative undecaprenyl diphosphate synthase
THII_RS08560	PF01765	Ribosome recycling factor
THII_RS08565	PF00696	Amino acid kinase family
THII_RS08570	PF00889	Elongation factor TS
THII_RS08575	PF00318	Ribosomal protein S2
THII_RS08580	PF00557	Metallopeptidase family M24
THII_RS08585	PF00899	ThiF family
THII_RS08590	PF02597	ThiS family
THII_RS08595	PF02391	MoaE protein
THII_RS08610	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
THII_RS08610	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
THII_RS08610	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
THII_RS08615	PF00899	ThiF family
THII_RS08620	PF03922	OmpW family
THII_RS08635	PF00497	Bacterial extracellular solute-binding proteins, family 3
THII_RS08640	PF00639	PPIC-type PPIASE domain
THII_RS08645	PF04355	SmpA / OmlA family
THII_RS08650	PF14103	THII_RS08650
THII_RS08655	PF13304	AAA domain
THII_RS08660	PF00132	Bacterial transferase hexapeptide (six repeats)
THII_RS08660	PF12804	MobA-like NTP transferase domain
THII_RS08675	PF10006	THII_RS08675
THII_RS08680	PF01814	Hemerythrin HHE cation binding domain
THII_RS08685	PF00027	Cyclic nucleotide-binding domain
THII_RS08685	PF13545	Crp-like helix-turn-helix domain
THII_RS08695	PF03023	THII_RS08695
THII_RS08700	PF01687	Riboflavin kinase
THII_RS08700	PF06574	FAD synthetase
THII_RS08705	PF00350	Dynamin family
THII_RS08710	PF08897	THII_RS08710
THII_RS08720	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS08720	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS08720	PF07494	Two component regulator propeller
THII_RS08720	PF07495	Y_Y_Y domain
THII_RS08725	PF00384	Molybdopterin oxidoreductase
THII_RS08725	PF01568	Molydopterin dinucleotide binding domain
THII_RS08725	PF04324	BFD-like [2Fe-2S] binding domain
THII_RS08725	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
THII_RS08740	PF13806	Rieske-like [2Fe-2S] domain
THII_RS08745	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
THII_RS08745	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
THII_RS08745	PF04324	BFD-like [2Fe-2S] binding domain
THII_RS08745	PF07992	Pyridine nucleotide-disulphide oxidoreductase
THII_RS08750	PF07690	Major Facilitator Superfamily
THII_RS08755	PF13379	NMT1-like family
THII_RS08760	PF00072	Response regulator receiver domain
THII_RS08760	PF03861	ANTAR domain
THII_RS08770	PF05860	haemagglutination activity domain
THII_RS08775	PF05685	Putative restriction endonuclease
THII_RS08780	PF00005	ABC transporter
THII_RS08785	PF01032	FecCD transport family
THII_RS08800	PF07295	THII_RS08800
THII_RS08805	PF00795	Carbon-nitrogen hydrolase
THII_RS08810	PF13682	Chemoreceptor zinc-binding domain
THII_RS08815	PF00571	CBS domain
THII_RS08815	PF03471	Transporter associated domain
THII_RS08820	PF02130	Uncharacterized protein family UPF0054
THII_RS08825	PF02562	PhoH-like protein
THII_RS08830	PF00919	Uncharacterized protein family UPF0004
THII_RS08830	PF01938	TRAM domain
THII_RS08830	PF04055	Radical SAM superfamily
THII_RS08835	PF12849	PBP superfamily domain
THII_RS08840	PF01171	PP-loop family
THII_RS08845	PF00581	Rhodanese-like domain
THII_RS08850	PF01724	Domain of unknown function DUF29
THII_RS08855	PF00271	Helicase conserved C-terminal domain
THII_RS08855	PF04851	Type III restriction enzyme, res subunit
THII_RS08860	PF05685	Putative restriction endonuclease
THII_RS08870	PF00142	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
THII_RS08875	PF00148	Nitrogenase component 1 type Oxidoreductase
THII_RS08880	PF00148	Nitrogenase component 1 type Oxidoreductase
THII_RS08880	PF11844	Domain of unknown function (DUF3364)
THII_RS08885	PF06988	NifT/FixU protein
THII_RS08890	PF00037	4Fe-4S binding domain
THII_RS08895	PF02579	Dinitrogenase iron-molybdenum cofactor
THII_RS08895	PF16844	THII_RS08895
THII_RS08905	PF00148	Nitrogenase component 1 type Oxidoreductase
THII_RS08910	PF00148	Nitrogenase component 1 type Oxidoreductase
THII_RS08915	PF02579	Dinitrogenase iron-molybdenum cofactor
THII_RS08925	PF03270	Protein of unknown function, DUF269
THII_RS08930	PF12838	4Fe-4S dicluster domain
THII_RS08940	PF13499	EF-hand domain pair
THII_RS08945	PF05685	Putative restriction endonuclease
THII_RS08950	PF13676	TIR domain
THII_RS08955	PF00330	Aconitase family (aconitate hydratase)
THII_RS08965	PF01351	Ribonuclease HII
THII_RS08970	PF04333	THII_RS08970
THII_RS08980	PF05164	Cell division protein ZapA
THII_RS08985	PF00437	Type II/IV secretion system protein
THII_RS08990	PF03050	THII_RS08990
THII_RS08995	PF01797	Transposase IS200 like
THII_RS09000	PF00155	Aminotransferase class I and II
THII_RS09005	PF00989	PAS fold
THII_RS09005	PF08447	PAS fold
THII_RS09005	PF08448	PAS fold
THII_RS09005	PF13188	PAS domain
THII_RS09005	PF13426	PAS domain
THII_RS09010	PF00204	DNA gyrase B
THII_RS09010	PF00986	DNA gyrase B subunit, carboxyl terminus
THII_RS09010	PF01751	Toprim domain
THII_RS09010	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS09015	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
THII_RS09020	PF06769	Plasmid encoded toxin Txe
THII_RS09025	PF02547	Queuosine biosynthesis protein
THII_RS09045	PF09419	THII_RS09045
THII_RS09075	PF00027	Cyclic nucleotide-binding domain
THII_RS09075	PF00999	Sodium/hydrogen exchanger family
THII_RS09080	PF00072	Response regulator receiver domain
THII_RS09080	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS09085	PF04358	DsrC like protein
THII_RS09090	PF00072	Response regulator receiver domain
THII_RS09090	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS09090	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS09100	PF04390	Lipopolysaccharide-assembly
THII_RS09105	PF00133	tRNA synthetases class I (I, L, M and V)
THII_RS09105	PF08264	Anticodon-binding domain of tRNA
THII_RS09105	PF13603	Leucyl-tRNA synthetase, Domain 2
THII_RS09115	PF10672	S-adenosylmethionine-dependent methyltransferase
THII_RS09125	PF13638	PIN domain
THII_RS09150	PF00330	Aconitase family (aconitate hydratase)
THII_RS09150	PF06434	Aconitate hydratase 2 N-terminus
THII_RS09150	PF11791	Aconitate B N-terminal domain
THII_RS09170	PF01061	THII_RS09170
THII_RS09175	PF13432	Tetratricopeptide repeat
THII_RS09180	PF13598	THII_RS09180
THII_RS09190	PF03819	MazG nucleotide pyrophosphohydrolase domain
THII_RS09205	PF00456	Transketolase, thiamine diphosphate binding domain
THII_RS09210	PF02779	Transketolase, pyrimidine binding domain
THII_RS09210	PF02780	Transketolase, C-terminal domain
THII_RS09215	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
THII_RS09225	PF00749	tRNA synthetases class I (E and Q), catalytic domain
THII_RS09235	PF01103	Surface antigen
THII_RS09235	PF07244	Surface antigen variable number repeat
THII_RS09245	PF02558	Ketopantoate reductase PanE/ApbA
THII_RS09245	PF08546	Ketopantoate reductase PanE/ApbA C terminal
THII_RS09250	PF01871	AMMECR1
THII_RS09255	PF01875	Memo-like protein
THII_RS09260	PF04055	Radical SAM superfamily
THII_RS09275	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
THII_RS09280	PF12804	MobA-like NTP transferase domain
THII_RS09285	PF00266	Aminotransferase class-V
THII_RS09290	PF05685	Putative restriction endonuclease
THII_RS09295	PF13801	Heavy-metal resistance
THII_RS09305	PF04542	Sigma-70 region 2
THII_RS09305	PF08281	Sigma-70, region 4
THII_RS09310	PF13202	EF hand
THII_RS09310	PF13833	EF-hand domain pair
THII_RS09315	PF13905	Thioredoxin-like
THII_RS09325	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
THII_RS09330	PF00528	Binding-protein-dependent transport system inner membrane component
THII_RS09335	PF00005	ABC transporter
THII_RS09335	PF00571	CBS domain
THII_RS09340	PF08241	Methyltransferase domain
THII_RS09345	PF13649	Methyltransferase domain
THII_RS09350	PF13649	Methyltransferase domain
THII_RS09365	PF01170	Putative RNA methylase family UPF0020
THII_RS09365	PF02926	THUMP domain
THII_RS09365	PF10672	S-adenosylmethionine-dependent methyltransferase
THII_RS09370	PF01165	Ribosomal protein S21
THII_RS09375	PF09424	Yqey-like protein
THII_RS09380	PF01807	CHC2 zinc finger
THII_RS09380	PF08275	DNA primase catalytic core, N-terminal domain
THII_RS09380	PF08278	DNA primase DnaG DnaB-binding
THII_RS09380	PF10410	DnaB-helicase binding domain of primase
THII_RS09380	PF13662	Toprim domain
THII_RS09385	PF00140	Sigma-70 factor, region 1
THII_RS09385	PF03979	Sigma-70 factor, region 1
THII_RS09385	PF04539	Sigma-70 region 3
THII_RS09385	PF04542	Sigma-70 region 2
THII_RS09385	PF04545	Sigma-70, region 4
THII_RS09385	PF04546	Sigma-70, non-essential region
THII_RS09390	PF01113	Dihydrodipicolinate reductase, N-terminus
THII_RS09390	PF05173	Dihydrodipicolinate reductase, C-terminus
THII_RS09395	PF07883	Cupin domain
THII_RS09400	PF01894	Uncharacterised protein family UPF0047
THII_RS09405	PF00535	Glycosyl transferase family 2
THII_RS09410	PF00563	EAL domain
THII_RS09410	PF00990	GGDEF domain
THII_RS09410	PF13426	PAS domain
THII_RS09415	PF00850	Histone deacetylase domain
THII_RS09420	PF00875	DNA photolyase
THII_RS09420	PF03441	FAD binding domain of DNA photolyase
THII_RS09430	PF00005	ABC transporter
THII_RS09430	PF12848	ABC transporter
THII_RS09435	PF07690	Major Facilitator Superfamily
THII_RS09440	PF01813	ATP synthase subunit D
THII_RS09445	PF00156	Phosphoribosyl transferase domain
THII_RS09450	PF01578	THII_RS09450
THII_RS09460	PF00905	Penicillin binding protein transpeptidase domain
THII_RS09460	PF00912	Transglycosylase
THII_RS09460	PF14814	Bifunctional transglycosylase second domain
THII_RS09470	PF01584	CheW-like domain
THII_RS09475	PF01739	CheR methyltransferase, SAM binding domain
THII_RS09480	PF01584	CheW-like domain
THII_RS09485	PF00072	Response regulator receiver domain
THII_RS09485	PF01584	CheW-like domain
THII_RS09485	PF01627	Hpt domain
THII_RS09485	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS09485	PF02895	Signal transducing histidine kinase, homodimeric domain
THII_RS09490	PF00072	Response regulator receiver domain
THII_RS09490	PF01339	CheB methylesterase
THII_RS09495	PF00072	Response regulator receiver domain
THII_RS09495	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS09500	PF13472	GDSL-like Lipase/Acylhydrolase family
THII_RS09505	PF13578	Methyltransferase domain
THII_RS09525	PF13472	GDSL-like Lipase/Acylhydrolase family
THII_RS09535	PF05860	haemagglutination activity domain
THII_RS09540	PF04255	Protein of unknown function (DUF433)
THII_RS09555	PF01850	PIN domain
THII_RS09570	PF13394	4Fe-4S single cluster domain
THII_RS09575	PF01797	Transposase IS200 like
THII_RS09580	PF05016	Plasmid stabilisation system protein
THII_RS09590	PF09413	Domain of unknown function (DUF2007)
THII_RS09595	PF00072	Response regulator receiver domain
THII_RS09595	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS09595	PF00672	HAMP domain
THII_RS09595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS09595	PF12729	THII_RS09595
THII_RS09595	PF13185	GAF domain
THII_RS09600	PF09084	NMT1/THI5 like
THII_RS09630	PF00990	GGDEF domain
THII_RS09635	PF01580	FtsK/SpoIIIE family
THII_RS09635	PF13491	THII_RS09635
THII_RS09640	PF00149	Calcineurin-like phosphoesterase
THII_RS09645	PF08241	Methyltransferase domain
THII_RS09650	PF04379	Protein of unknown function (DUF525)
THII_RS09670	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
THII_RS09675	PF00639	PPIC-type PPIASE domain
THII_RS09675	PF09312	SurA N-terminal domain
THII_RS09680	PF01850	PIN domain
THII_RS09685	PF10047	THII_RS09685
THII_RS09690	PF14238	THII_RS09690
THII_RS09695	PF09822	THII_RS09695
THII_RS09700	PF12679	THII_RS09700
THII_RS09705	PF00005	ABC transporter
THII_RS09710	PF07728	AAA domain (dynein-related subfamily)
THII_RS09710	PF08406	THII_RS09710
THII_RS09720	PF00462	Glutaredoxin
THII_RS09725	PF00691	OmpA family
THII_RS09725	PF02412	Thrombospondin type 3 repeat
THII_RS09730	PF00691	OmpA family
THII_RS09730	PF02412	Thrombospondin type 3 repeat
THII_RS09740	PF07700	Heme NO binding
THII_RS09745	PF00117	Glutamine amidotransferase class-I
THII_RS09750	PF00437	Type II/IV secretion system protein
THII_RS09750	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
THII_RS09755	PF00482	Type II secretion system (T2SS), protein F
THII_RS09760	PF01478	Type IV leader peptidase family
THII_RS09760	PF06750	THII_RS09760
THII_RS09765	PF01121	Dephospho-CoA kinase
THII_RS09770	PF07072	Protein of unknown function (DUF1342)
THII_RS09780	PF00072	Response regulator receiver domain
THII_RS09785	PF13379	NMT1-like family
THII_RS09800	PF00072	Response regulator receiver domain
THII_RS09800	PF01584	CheW-like domain
THII_RS09800	PF01627	Hpt domain
THII_RS09800	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS09815	PF03747	ADP-ribosylglycohydrolase
THII_RS09830	PF01609	Transposase DDE domain
THII_RS09840	PF05658	Head domain of trimeric autotransporter adhesin
THII_RS09840	PF11962	Peptidase_G2, IMC autoproteolytic cleavage domain
THII_RS09855	PF04865	THII_RS09855
THII_RS09860	PF01850	PIN domain
THII_RS09870	PF01381	Helix-turn-helix
THII_RS09875	PF05015	Plasmid maintenance system killer protein
THII_RS09915	PF09684	THII_RS09915
THII_RS09920	PF04865	THII_RS09920
THII_RS09925	PF04965	Gene 25-like lysozyme
THII_RS09940	PF05954	Phage late control gene D protein (GPD)
THII_RS09955	PF06769	Plasmid encoded toxin Txe
THII_RS09960	PF10047	THII_RS09960
THII_RS09975	PF00004	ATPase family associated with various cellular activities (AAA)
THII_RS09980	PF14065	THII_RS09980
THII_RS09995	PF06841	THII_RS09995
THII_RS10010	PF04255	Protein of unknown function (DUF433)
THII_RS10015	PF01927	THII_RS10015
THII_RS10025	PF02452	PemK-like protein
THII_RS10040	PF08780	Nucleotidyltransferase substrate binding protein like
THII_RS10045	PF01909	Nucleotidyltransferase domain
THII_RS10055	PF10387	Protein of unknown function (DUF2442)
THII_RS10060	PF13711	THII_RS10060
THII_RS10065	PF03734	L,D-transpeptidase catalytic domain
THII_RS10085	PF13148	THII_RS10085
THII_RS10085	PF13362	Toprim domain
THII_RS10095	PF00589	Phage integrase family
THII_RS10095	PF13356	Domain of unknown function (DUF4102)
THII_RS10105	PF00089	Trypsin
THII_RS10110	PF00270	DEAD/DEAH box helicase
THII_RS10110	PF00271	Helicase conserved C-terminal domain
THII_RS10110	PF09369	THII_RS10110
THII_RS10115	PF02559	CarD-like/TRCF domain
THII_RS10120	PF04445	Putative SAM-dependent methyltransferase
THII_RS10130	PF00990	GGDEF domain
THII_RS10130	PF08448	PAS fold
THII_RS10130	PF13185	GAF domain
THII_RS10135	PF00207	Alpha-2-macroglobulin family
THII_RS10135	PF01835	MG2 domain
THII_RS10135	PF07703	Alpha-2-macroglobulin family N-terminal region
THII_RS10135	PF11974	Alpha-2-macroglobulin MG1 domain
THII_RS10140	PF00588	SpoU rRNA Methylase family
THII_RS10145	PF01464	Transglycosylase SLT domain
THII_RS10145	PF14718	Soluble lytic murein transglycosylase L domain
THII_RS10150	PF13514	AAA domain
THII_RS10165	PF00149	Calcineurin-like phosphoesterase
THII_RS10170	PF03259	Roadblock/LC7 domain
THII_RS10175	PF13682	Chemoreceptor zinc-binding domain
THII_RS10185	PF03029	Conserved hypothetical ATP binding protein
THII_RS10195	PF03279	THII_RS10195
THII_RS10205	PF00482	Type II secretion system (T2SS), protein F
THII_RS10245	PF00534	Glycosyl transferases group 1
THII_RS10245	PF13579	Glycosyl transferase 4-like domain
THII_RS10250	PF02705	THII_RS10250
THII_RS10255	PF12146	Putative lysophospholipase
THII_RS10260	PF07719	Tetratricopeptide repeat
THII_RS10260	PF13414	TPR repeat
THII_RS10265	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
THII_RS10265	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
THII_RS10270	PF01571	Aminomethyltransferase folate-binding domain
THII_RS10270	PF08669	Glycine cleavage T-protein C-terminal barrel domain
THII_RS10275	PF01597	Glycine cleavage H-protein
THII_RS10280	PF02347	Glycine cleavage system P-protein
THII_RS10285	PF00072	Response regulator receiver domain
THII_RS10290	PF04892	THII_RS10290
THII_RS10290	PF10990	THII_RS10290
THII_RS10305	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS10310	PF00696	Amino acid kinase family
THII_RS10310	PF01472	PUA domain
THII_RS10320	PF01618	THII_RS10320
THII_RS10325	PF05685	Putative restriction endonuclease
THII_RS10350	PF00596	Class II Aldolase and Adducin N-terminal domain
THII_RS10350	PF13561	Enoyl-(Acyl carrier protein) reductase
THII_RS10360	PF01471	Putative peptidoglycan binding domain
THII_RS10360	PF13401	AAA domain
THII_RS10375	PF13711	THII_RS10375
THII_RS10380	PF01546	Peptidase family M20/M25/M40
THII_RS10380	PF07687	Peptidase dimerisation domain
THII_RS10385	PF00639	PPIC-type PPIASE domain
THII_RS10390	PF01722	BolA-like protein
THII_RS10395	PF03795	YCII-related domain
THII_RS10400	PF13328	HD domain
THII_RS10405	PF04279	THII_RS10405
THII_RS10415	PF00005	ABC transporter
THII_RS10420	PF02405	THII_RS10420
THII_RS10430	PF02472	Biopolymer transport protein ExbD/TolR
THII_RS10435	PF00572	Ribosomal protein L13
THII_RS10440	PF00380	Ribosomal protein S9/S16
THII_RS10445	PF00128	Alpha amylase, catalytic domain
THII_RS10445	PF02806	Alpha amylase, C-terminal all-beta domain
THII_RS10445	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
THII_RS10450	PF05685	Putative restriction endonuclease
THII_RS10455	PF16868	THII_RS10455
THII_RS10460	PF00459	Inositol monophosphatase family
THII_RS10465	PF01812	5-formyltetrahydrofolate cyclo-ligase family
THII_RS10475	PF13005	THII_RS10475
THII_RS10480	PF00501	AMP-binding enzyme
THII_RS10480	PF01553	Acyltransferase
THII_RS10480	PF07690	Major Facilitator Superfamily
THII_RS10490	PF01650	Peptidase C13 family
THII_RS10490	PF03160	Calx-beta domain
THII_RS10490	PF05345	Putative Ig domain
THII_RS10490	PF10282	Lactonase, 7-bladed beta-propeller
THII_RS10495	PF05973	THII_RS10495
THII_RS10500	PF01381	Helix-turn-helix
THII_RS10515	PF05685	Putative restriction endonuclease
THII_RS10520	PF03702	Uncharacterised protein family (UPF0075)
THII_RS10530	PF05685	Putative restriction endonuclease
THII_RS10540	PF00999	Sodium/hydrogen exchanger family
THII_RS10540	PF02254	TrkA-N domain
THII_RS10545	PF03988	THII_RS10545
THII_RS10555	PF00171	Aldehyde dehydrogenase family
THII_RS10560	PF12770	THII_RS10560
THII_RS10560	PF13424	Tetratricopeptide repeat
THII_RS10565	PF03275	UDP-galactopyranose mutase
THII_RS10565	PF13450	NAD(P)-binding Rossmann-like domain
THII_RS10575	PF01850	PIN domain
THII_RS10580	PF01553	Acyltransferase
THII_RS10585	PF03372	Endonuclease/Exonuclease/phosphatase family
THII_RS10590	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
THII_RS10595	PF01850	PIN domain
THII_RS10615	PF05685	Putative restriction endonuclease
THII_RS10620	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
THII_RS10620	PF03033	Glycosyltransferase family 28 N-terminal domain
THII_RS10625	PF01814	Hemerythrin HHE cation binding domain
THII_RS10630	PF00685	Sulfotransferase domain
THII_RS10635	PF09925	THII_RS10635
THII_RS10640	PF14351	THII_RS10640
THII_RS10645	PF14345	THII_RS10645
THII_RS10655	PF04932	THII_RS10655
THII_RS10665	PF04205	FMN-binding domain
THII_RS10670	PF03116	THII_RS10670
THII_RS10675	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
THII_RS10675	PF10531	SLBB domain
THII_RS10675	PF13237	4Fe-4S dicluster domain
THII_RS10675	PF13375	RnfC Barrel sandwich hybrid domain
THII_RS10680	PF04060	Putative Fe-S cluster
THII_RS10680	PF14697	4Fe-4S dicluster domain
THII_RS10685	PF02508	THII_RS10685
THII_RS10695	PF14346	Domain of unknown function (DUF4398)
THII_RS10705	PF00072	Response regulator receiver domain
THII_RS10705	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS10705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS10705	PF12729	THII_RS10705
THII_RS10710	PF01648	4'-phosphopantetheinyl transferase superfamily
THII_RS10715	PF01964	ThiC family
THII_RS10715	PF13667	ThiC-associated domain
THII_RS10720	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
THII_RS10725	PF02321	Outer membrane efflux protein
THII_RS10730	PF00082	Subtilase family
THII_RS10730	PF04151	Bacterial pre-peptidase C-terminal domain
THII_RS10735	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS10735	PF13188	PAS domain
THII_RS10740	PF01584	CheW-like domain
THII_RS10745	PF01584	CheW-like domain
THII_RS10745	PF01627	Hpt domain
THII_RS10745	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS10745	PF02895	Signal transducing histidine kinase, homodimeric domain
THII_RS10750	PF00072	Response regulator receiver domain
THII_RS10760	PF07238	PilZ domain
THII_RS10765	PF01026	TatD related DNase
THII_RS10770	PF00294	pfkB family carbohydrate kinase
THII_RS10775	PF00079	Serpin (serine protease inhibitor)
THII_RS10780	PF03232	THII_RS10780
THII_RS10785	PF01479	S4 domain
THII_RS10790	PF12784	THII_RS10790
THII_RS10795	PF00027	Cyclic nucleotide-binding domain
THII_RS10795	PF00924	Mechanosensitive ion channel
THII_RS10800	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS10800	PF00672	HAMP domain
THII_RS10800	PF12729	THII_RS10800
THII_RS10805	PF01584	CheW-like domain
THII_RS10815	PF04365	Protein of unknown function (DUF497)
THII_RS10830	PF00550	Phosphopantetheine attachment site
THII_RS10845	PF01710	Transposase
THII_RS10860	PF00109	Beta-ketoacyl synthase, N-terminal domain
THII_RS10860	PF00378	Enoyl-CoA hydratase/isomerase family
THII_RS10860	PF00550	Phosphopantetheine attachment site
THII_RS10860	PF00668	Condensation domain
THII_RS10860	PF02801	Beta-ketoacyl synthase, C-terminal domain
THII_RS10860	PF05050	Methyltransferase FkbM domain
THII_RS10860	PF08415	THII_RS10860
THII_RS10860	PF14765	Polyketide synthase dehydratase
THII_RS10860	PF16197	THII_RS10860
THII_RS10865	PF00109	Beta-ketoacyl synthase, N-terminal domain
THII_RS10865	PF00501	AMP-binding enzyme
THII_RS10865	PF00550	Phosphopantetheine attachment site
THII_RS10865	PF00698	Acyl transferase domain
THII_RS10865	PF02801	Beta-ketoacyl synthase, C-terminal domain
THII_RS10865	PF08659	KR domain
THII_RS10865	PF13193	AMP-binding enzyme C-terminal domain
THII_RS10865	PF14765	Polyketide synthase dehydratase
THII_RS10865	PF16197	THII_RS10865
THII_RS10870	PF13649	Methyltransferase domain
THII_RS10875	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
THII_RS10875	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
THII_RS10880	PF00550	Phosphopantetheine attachment site
THII_RS10885	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
THII_RS10885	PF02770	Acyl-CoA dehydrogenase, middle domain
THII_RS10885	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
THII_RS10895	PF00109	Beta-ketoacyl synthase, N-terminal domain
THII_RS10895	PF00550	Phosphopantetheine attachment site
THII_RS10895	PF02801	Beta-ketoacyl synthase, C-terminal domain
THII_RS10895	PF08659	KR domain
THII_RS10895	PF13649	Methyltransferase domain
THII_RS10895	PF16197	THII_RS10895
THII_RS10900	PF00107	Zinc-binding dehydrogenase
THII_RS10900	PF00109	Beta-ketoacyl synthase, N-terminal domain
THII_RS10900	PF00550	Phosphopantetheine attachment site
THII_RS10900	PF00975	Thioesterase domain
THII_RS10900	PF02801	Beta-ketoacyl synthase, C-terminal domain
THII_RS10900	PF08240	Alcohol dehydrogenase GroES-like domain
THII_RS10900	PF08242	Methyltransferase domain
THII_RS10900	PF08659	KR domain
THII_RS10900	PF13602	Zinc-binding dehydrogenase
THII_RS10900	PF14765	Polyketide synthase dehydratase
THII_RS10900	PF16197	THII_RS10900
THII_RS10910	PF13808	THII_RS10910
THII_RS10920	PF03400	THII_RS10920
THII_RS10930	PF00698	Acyl transferase domain
THII_RS10935	PF13358	DDE superfamily endonuclease
THII_RS10940	PF00109	Beta-ketoacyl synthase, N-terminal domain
THII_RS10940	PF02801	Beta-ketoacyl synthase, C-terminal domain
THII_RS10945	PF13808	THII_RS10945
THII_RS10950	PF01844	HNH endonuclease
THII_RS10955	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
THII_RS10955	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
THII_RS10960	PF00378	Enoyl-CoA hydratase/isomerase family
THII_RS10965	PF13340	THII_RS10965
THII_RS10995	PF00589	Phage integrase family
THII_RS11020	PF01710	Transposase
THII_RS11045	PF00391	PEP-utilising enzyme, mobile domain
THII_RS11045	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
THII_RS11050	PF01797	Transposase IS200 like
THII_RS11055	PF13411	MerR HTH family regulatory protein
THII_RS11060	PF13612	THII_RS11060
THII_RS11070	PF01710	Transposase
THII_RS11075	PF00122	E1-E2 ATPase
THII_RS11075	PF00702	haloacid dehalogenase-like hydrolase
THII_RS11080	PF13358	DDE superfamily endonuclease
THII_RS11085	PF01710	Transposase
THII_RS11090	PF13362	Toprim domain
THII_RS11105	PF13358	DDE superfamily endonuclease
THII_RS11140	PF00239	Resolvase, N terminal domain
THII_RS11150	PF01926	50S ribosome-binding GTPase
THII_RS11150	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
THII_RS11155	PF05016	Plasmid stabilisation system protein
THII_RS11165	PF00263	THII_RS11165
THII_RS11165	PF03958	Bacterial type II/III secretion system short domain
THII_RS11170	PF00482	Type II secretion system (T2SS), protein F
THII_RS11175	PF00437	Type II/IV secretion system protein
THII_RS11185	PF00133	tRNA synthetases class I (I, L, M and V)
THII_RS11185	PF08264	Anticodon-binding domain of tRNA
THII_RS11185	PF10458	Valyl tRNA synthetase tRNA binding arm
THII_RS11205	PF01850	PIN domain
THII_RS11215	PF01850	PIN domain
THII_RS11220	PF14072	THII_RS11220
THII_RS11225	PF03168	Late embryogenesis abundant protein
THII_RS11230	PF00733	Asparagine synthase
THII_RS11235	PF05161	MOFRL family
THII_RS11235	PF13660	Domain of unknown function (DUF4147)
THII_RS11240	PF04754	THII_RS11240
THII_RS11245	PF12831	FAD dependent oxidoreductase
THII_RS11250	PF02662	THII_RS11250
THII_RS11250	PF07992	Pyridine nucleotide-disulphide oxidoreductase
THII_RS11250	PF13187	4Fe-4S dicluster domain
THII_RS11255	PF13534	4Fe-4S dicluster domain
THII_RS11260	PF02754	THII_RS11260
THII_RS11270	PF01381	Helix-turn-helix
THII_RS11275	PF04365	Protein of unknown function (DUF497)
THII_RS11285	PF00011	Hsp20/alpha crystallin family
THII_RS11290	PF00226	DnaJ domain
THII_RS11290	PF01556	DnaJ C terminal domain
THII_RS11295	PF00149	Calcineurin-like phosphoesterase
THII_RS11300	PF03710	Glutamate-ammonia ligase adenylyltransferase
THII_RS11300	PF08335	GlnD PII-uridylyltransferase
THII_RS11305	PF08239	Bacterial SH3 domain
THII_RS11310	PF01063	Aminotransferase class IV
THII_RS11315	PF00425	chorismate binding enzyme
THII_RS11320	PF11251	THII_RS11320
THII_RS11330	PF01339	CheB methylesterase
THII_RS11335	PF01739	CheR methyltransferase, SAM binding domain
THII_RS11335	PF03705	CheR methyltransferase, all-alpha domain
THII_RS11340	PF13176	Tetratricopeptide repeat
THII_RS11340	PF13181	Tetratricopeptide repeat
THII_RS11340	PF13374	Tetratricopeptide repeat
THII_RS11340	PF13424	Tetratricopeptide repeat
THII_RS11345	PF13231	THII_RS11345
THII_RS11350	PF00534	Glycosyl transferases group 1
THII_RS11350	PF13439	Glycosyltransferase Family 4
THII_RS11355	PF00535	Glycosyl transferase family 2
THII_RS11360	PF05685	Putative restriction endonuclease
THII_RS11365	PF00733	Asparagine synthase
THII_RS11365	PF13537	Glutamine amidotransferase domain
THII_RS11375	PF01926	50S ribosome-binding GTPase
THII_RS11375	PF06071	Protein of unknown function (DUF933)
THII_RS11380	PF01195	Peptidyl-tRNA hydrolase
THII_RS11385	PF01386	Ribosomal L25p family
THII_RS11385	PF14693	Ribosomal protein TL5, C-terminal domain
THII_RS11390	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
THII_RS11390	PF14572	Phosphoribosyl synthetase-associated domain
THII_RS11400	PF00288	GHMP kinases N terminal domain
THII_RS11400	PF08544	GHMP kinases C terminal
THII_RS11405	PF03550	Outer membrane lipoprotein LolB
THII_RS11410	PF13414	TPR repeat
THII_RS11410	PF13432	Tetratricopeptide repeat
THII_RS11410	PF14559	Tetratricopeptide repeat
THII_RS11415	PF00578	AhpC/TSA family
THII_RS11420	PF02562	PhoH-like protein
THII_RS11420	PF13638	PIN domain
THII_RS11425	PF00478	IMP dehydrogenase / GMP reductase domain
THII_RS11425	PF00571	CBS domain
THII_RS11430	PF00092	von Willebrand factor type A domain
THII_RS11435	PF02310	B12 binding domain
THII_RS11435	PF04055	Radical SAM superfamily
THII_RS11440	PF05685	Putative restriction endonuclease
THII_RS11445	PF05685	Putative restriction endonuclease
THII_RS11450	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
THII_RS11455	PF00174	Oxidoreductase molybdopterin binding domain
THII_RS11455	PF03404	Mo-co oxidoreductase dimerisation domain
THII_RS11470	PF01555	DNA methylase
THII_RS11480	PF00072	Response regulator receiver domain
THII_RS11480	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS11480	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS11480	PF00672	HAMP domain
THII_RS11480	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS11480	PF02743	Cache domain
THII_RS11485	PF01066	CDP-alcohol phosphatidyltransferase
THII_RS11490	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
THII_RS11490	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
THII_RS11505	PF13175	AAA ATPase domain
THII_RS11510	PF10369	Small subunit of acetolactate synthase
THII_RS11510	PF13710	ACT domain
THII_RS11515	PF00205	Thiamine pyrophosphate enzyme, central domain
THII_RS11515	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
THII_RS11515	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
THII_RS11520	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
THII_RS11520	PF12801	THII_RS11520
THII_RS11520	PF13746	4Fe-4S dicluster domain
THII_RS11525	PF05751	THII_RS11525
THII_RS11550	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
THII_RS11555	PF00581	Rhodanese-like domain
THII_RS11560	PF00301	Rubredoxin
THII_RS11565	PF08543	Phosphomethylpyrimidine kinase
THII_RS11570	PF02581	Thiamine monophosphate synthase/TENI
THII_RS11575	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
THII_RS11585	PF00072	Response regulator receiver domain
THII_RS11585	PF00158	Sigma-54 interaction domain
THII_RS11585	PF02954	Bacterial regulatory protein, Fis family
THII_RS11600	PF00571	CBS domain
THII_RS11605	PF01894	Uncharacterised protein family UPF0047
THII_RS11610	PF07007	Protein of unknown function (DUF1311)
THII_RS11615	PF13975	THII_RS11615
THII_RS11620	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
THII_RS11620	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
THII_RS11625	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS11625	PF05226	THII_RS11625
THII_RS11630	PF06051	THII_RS11630
THII_RS11635	PF01545	Cation efflux family
THII_RS11635	PF16916	THII_RS11635
THII_RS11640	PF02321	Outer membrane efflux protein
THII_RS11645	PF04773	FecR protein
THII_RS11650	PF00578	AhpC/TSA family
THII_RS11655	PF01926	50S ribosome-binding GTPase
THII_RS11660	PF00004	ATPase family associated with various cellular activities (AAA)
THII_RS11660	PF02861	Clp amino terminal domain
THII_RS11660	PF07724	AAA domain (Cdc48 subfamily)
THII_RS11660	PF10431	C-terminal, D2-small domain, of ClpB protein
THII_RS11665	PF02617	ATP-dependent Clp protease adaptor protein ClpS
THII_RS11670	PF06271	THII_RS11670
THII_RS11680	PF00140	Sigma-70 factor, region 1
THII_RS11680	PF04542	Sigma-70 region 2
THII_RS11680	PF04545	Sigma-70, region 4
THII_RS11685	PF01636	Phosphotransferase enzyme family
THII_RS11690	PF00483	Nucleotidyl transferase
THII_RS11695	PF00453	Ribosomal protein L20
THII_RS11700	PF01632	Ribosomal protein L35
THII_RS11705	PF00707	Translation initiation factor IF-3, C-terminal domain
THII_RS11705	PF05198	Translation initiation factor IF-3, N-terminal domain
THII_RS11710	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
THII_RS11710	PF02824	TGS domain
THII_RS11710	PF03129	Anticodon binding domain
THII_RS11710	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
THII_RS11730	PF00881	Nitroreductase family
THII_RS11735	PF00069	Protein kinase domain
THII_RS11735	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS11735	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS11735	PF13185	GAF domain
THII_RS11735	PF13191	AAA ATPase domain
THII_RS11750	PF00027	Cyclic nucleotide-binding domain
THII_RS11760	PF03703	THII_RS11760
THII_RS11765	PF00850	Histone deacetylase domain
THII_RS11770	PF05685	Putative restriction endonuclease
THII_RS11785	PF01850	PIN domain
THII_RS11790	PF10047	THII_RS11790
THII_RS11795	PF05860	haemagglutination activity domain
THII_RS11800	PF12770	THII_RS11800
THII_RS11805	PF01715	IPP transferase
THII_RS11815	PF01926	50S ribosome-binding GTPase
THII_RS11815	PF13167	THII_RS11815
THII_RS11815	PF16360	THII_RS11815
THII_RS11820	PF01145	SPFH domain / Band 7 family
THII_RS11820	PF12221	THII_RS11820
THII_RS11825	PF01145	SPFH domain / Band 7 family
THII_RS11830	PF09838	THII_RS11830
THII_RS11835	PF13393	Histidyl-tRNA synthetase
THII_RS11840	PF00709	Adenylosuccinate synthetase
THII_RS11845	PF02678	Pirin
THII_RS11850	PF13540	Regulator of chromosome condensation (RCC1) repeat
THII_RS11855	PF13540	Regulator of chromosome condensation (RCC1) repeat
THII_RS11865	PF13518	Helix-turn-helix domain
THII_RS11870	PF03400	THII_RS11870
THII_RS11875	PF00082	Subtilase family
THII_RS11880	PF06097	THII_RS11880
THII_RS11885	PF04203	Sortase family
THII_RS11890	PF00072	Response regulator receiver domain
THII_RS11890	PF00486	Transcriptional regulatory protein, C terminal
THII_RS11895	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS11895	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS11895	PF06452	Domain of unknown function (DUF1083)
THII_RS11920	PF01724	Domain of unknown function DUF29
THII_RS11925	PF02508	THII_RS11925
THII_RS11930	PF13489	Methyltransferase domain
THII_RS11935	PF00633	Helix-hairpin-helix motif
THII_RS11935	PF00730	HhH-GPD superfamily base excision DNA repair protein
THII_RS11935	PF10576	Iron-sulfur binding domain of endonuclease III
THII_RS11940	PF02527	rRNA small subunit methyltransferase G
THII_RS11960	PF06769	Plasmid encoded toxin Txe
THII_RS11970	PF14346	Domain of unknown function (DUF4398)
THII_RS11975	PF00691	OmpA family
THII_RS11980	PF07728	AAA domain (dynein-related subfamily)
THII_RS11980	PF08406	THII_RS11980
THII_RS11985	PF00920	Dehydratase family
THII_RS11990	PF00672	HAMP domain
THII_RS11990	PF02743	Cache domain
THII_RS12000	PF02481	DNA recombination-mediator protein A
THII_RS12005	PF04361	THII_RS12005
THII_RS12010	PF01131	DNA topoisomerase
THII_RS12010	PF01396	THII_RS12010
THII_RS12010	PF01751	Toprim domain
THII_RS12015	PF01300	Telomere recombination
THII_RS12020	PF00543	Nitrogen regulatory protein P-II
THII_RS12025	PF00909	Ammonium Transporter Family
THII_RS12030	PF00691	OmpA family
THII_RS12030	PF08487	THII_RS12030
THII_RS12030	PF13768	von Willebrand factor type A domain
THII_RS12035	PF05685	Putative restriction endonuclease
THII_RS12045	PF00691	OmpA family
THII_RS12050	PF00226	DnaJ domain
THII_RS12065	PF00072	Response regulator receiver domain
THII_RS12065	PF01339	CheB methylesterase
THII_RS12070	PF03975	CheD chemotactic sensory transduction
THII_RS12075	PF01739	CheR methyltransferase, SAM binding domain
THII_RS12075	PF03705	CheR methyltransferase, all-alpha domain
THII_RS12080	PF13466	STAS domain
THII_RS12085	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS12085	PF00672	HAMP domain
THII_RS12085	PF12729	THII_RS12085
THII_RS12095	PF13578	Methyltransferase domain
THII_RS12100	PF02589	Uncharacterised ACR, YkgG family COG1556
THII_RS12105	PF02589	Uncharacterised ACR, YkgG family COG1556
THII_RS12105	PF11870	THII_RS12105
THII_RS12105	PF13183	4Fe-4S dicluster domain
THII_RS12110	PF00188	Cysteine-rich secretory protein family
THII_RS12120	PF05685	Putative restriction endonuclease
THII_RS12130	PF01724	Domain of unknown function DUF29
THII_RS12145	PF00114	Pilin (bacterial filament)
THII_RS12145	PF13633	Prokaryotic N-terminal methylation site
THII_RS12150	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
THII_RS12150	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
THII_RS12160	PF02754	THII_RS12160
THII_RS12160	PF13183	4Fe-4S dicluster domain
THII_RS12165	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
THII_RS12165	PF10518	TAT (twin-arginine translocation) pathway signal sequence
THII_RS12165	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
THII_RS12170	PF02333	Phytase
THII_RS12175	PF02405	THII_RS12175
THII_RS12175	PF13466	STAS domain
THII_RS12180	PF01476	LysM domain
THII_RS12190	PF07728	AAA domain (dynein-related subfamily)
THII_RS12195	PF08447	PAS fold
THII_RS12210	PF04012	THII_RS12210
THII_RS12215	PF09938	THII_RS12215
THII_RS12220	PF01992	ATP synthase (C/AC39) subunit
THII_RS12240	PF03741	THII_RS12240
THII_RS12245	PF08239	Bacterial SH3 domain
THII_RS12250	PF00291	Pyridoxal-phosphate dependent enzyme
THII_RS12255	PF02501	Type II secretion system (T2SS), protein I
THII_RS12255	PF13633	Prokaryotic N-terminal methylation site
THII_RS12270	PF05016	Plasmid stabilisation system protein
THII_RS12275	PF15647	THII_RS12275
THII_RS12285	PF03811	THII_RS12285
THII_RS12295	PF00106	short chain dehydrogenase
THII_RS12300	PF00890	FAD binding domain
THII_RS12300	PF02910	Fumarate reductase flavoprotein C-term
THII_RS12305	PF04246	THII_RS12305
THII_RS12310	PF00595	PDZ domain (Also known as DHR or GLGF)
THII_RS12310	PF13180	PDZ domain
THII_RS12310	PF13365	Trypsin-like peptidase domain
THII_RS12315	PF05768	Glutaredoxin-like domain (DUF836)
THII_RS12320	PF00009	Elongation factor Tu GTP binding domain
THII_RS12320	PF00679	Elongation factor G C-terminus
THII_RS12320	PF03144	Elongation factor Tu domain 2
THII_RS12320	PF06421	GTP-binding protein LepA C-terminus
THII_RS12325	PF00717	Peptidase S24-like
THII_RS12330	PF16137	THII_RS12330
THII_RS12335	PF00035	Double-stranded RNA binding motif
THII_RS12335	PF14622	Ribonuclease-III-like
THII_RS12340	PF01926	50S ribosome-binding GTPase
THII_RS12340	PF07650	KH domain
THII_RS12345	PF02412	Thrombospondin type 3 repeat
THII_RS12345	PF13385	Concanavalin A-like lectin/glucanases superfamily
THII_RS12360	PF03050	THII_RS12360
THII_RS12370	PF00561	alpha/beta hydrolase fold
THII_RS12370	PF12697	Alpha/beta hydrolase family
THII_RS12375	PF12770	THII_RS12375
THII_RS12390	PF01370	NAD dependent epimerase/dehydratase family
THII_RS12395	PF02754	THII_RS12395
THII_RS12400	PF03747	ADP-ribosylglycohydrolase
THII_RS12405	PF01145	SPFH domain / Band 7 family
THII_RS12410	PF12883	Protein of unknown function (DUF3828)
THII_RS12420	PF01850	PIN domain
THII_RS12425	PF13304	AAA domain
THII_RS12440	PF01891	Cobalt uptake substrate-specific transmembrane region
THII_RS12440	PF13190	THII_RS12440
THII_RS12450	PF06146	THII_RS12450
THII_RS12455	PF00437	Type II/IV secretion system protein
THII_RS12465	PF08881	CVNH domain
THII_RS12470	PF03658	RnfH family Ubiquitin
THII_RS12475	PF02508	THII_RS12475
THII_RS12490	PF10047	THII_RS12490
THII_RS12495	PF03006	THII_RS12495
THII_RS12505	PF07726	ATPase family associated with various cellular activities (AAA)
THII_RS12510	PF05425	THII_RS12510
THII_RS12515	PF02875	Mur ligase family, glutamate ligase domain
THII_RS12515	PF08245	Mur ligase middle domain
THII_RS12520	PF03033	Glycosyltransferase family 28 N-terminal domain
THII_RS12520	PF04101	Glycosyltransferase family 28 C-terminal domain
THII_RS12525	PF01225	Mur ligase family, catalytic domain
THII_RS12525	PF02875	Mur ligase family, glutamate ligase domain
THII_RS12525	PF08245	Mur ligase middle domain
THII_RS12530	PF01565	FAD binding domain
THII_RS12530	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
THII_RS12535	PF01820	D-ala D-ala ligase N-terminus
THII_RS12535	PF07478	D-ala D-ala ligase C-terminus
THII_RS12540	PF03799	Cell division protein FtsQ
THII_RS12540	PF08478	POTRA domain, FtsQ-type
THII_RS12545	PF02491	SHS2 domain inserted in FTSA
THII_RS12545	PF14450	Cell division protein FtsA
THII_RS12550	PF00091	Tubulin/FtsZ family, GTPase domain
THII_RS12550	PF12327	FtsZ family, C-terminal domain
THII_RS12555	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
THII_RS12560	PF05258	THII_RS12560
THII_RS12570	PF01850	PIN domain
THII_RS12580	PF00801	PKD domain
THII_RS12580	PF00963	Cohesin domain
THII_RS12580	PF01436	NHL repeat
THII_RS12585	PF00132	Bacterial transferase hexapeptide (six repeats)
THII_RS12590	PF00691	OmpA family
THII_RS12590	PF13441	THII_RS12590
THII_RS12605	PF06629	THII_RS12605
THII_RS12620	PF02592	THII_RS12620
THII_RS12625	PF02673	THII_RS12625
THII_RS12630	PF04892	THII_RS12630
THII_RS12635	PF07969	Amidohydrolase family
THII_RS12640	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS12645	PF00158	Sigma-54 interaction domain
THII_RS12645	PF02954	Bacterial regulatory protein, Fis family
THII_RS12645	PF13185	GAF domain
THII_RS12650	PF03235	THII_RS12650
THII_RS12665	PF01381	Helix-turn-helix
THII_RS12680	PF03658	RnfH family Ubiquitin
THII_RS12685	PF02508	THII_RS12685
THII_RS12690	PF04205	FMN-binding domain
THII_RS12695	PF03116	THII_RS12695
THII_RS12700	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
THII_RS12700	PF10531	SLBB domain
THII_RS12700	PF13237	4Fe-4S dicluster domain
THII_RS12700	PF13375	RnfC Barrel sandwich hybrid domain
THII_RS12705	PF04060	Putative Fe-S cluster
THII_RS12705	PF14697	4Fe-4S dicluster domain
THII_RS12710	PF02508	THII_RS12710
THII_RS12715	PF00989	PAS fold
THII_RS12715	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS12720	PF00158	Sigma-54 interaction domain
THII_RS12720	PF02954	Bacterial regulatory protein, Fis family
THII_RS12720	PF13185	GAF domain
THII_RS12725	PF08881	CVNH domain
THII_RS12730	PF01850	PIN domain
THII_RS12750	PF01029	NusB family
THII_RS12750	PF01189	NOL1/NOP2/sun family
THII_RS12755	PF14334	THII_RS12755
THII_RS12760	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS12760	PF00672	HAMP domain
THII_RS12760	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS12765	PF00072	Response regulator receiver domain
THII_RS12765	PF00158	Sigma-54 interaction domain
THII_RS12765	PF02954	Bacterial regulatory protein, Fis family
THII_RS12770	PF00072	Response regulator receiver domain
THII_RS12770	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS12770	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS12775	PF01520	N-acetylmuramoyl-L-alanine amidase
THII_RS12780	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
THII_RS12780	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
THII_RS12795	PF05015	Plasmid maintenance system killer protein
THII_RS12805	PF00521	DNA gyrase/topoisomerase IV, subunit A
THII_RS12805	PF03989	DNA gyrase C-terminal domain, beta-propeller
THII_RS12820	PF13274	THII_RS12820
THII_RS12830	PF01453	D-mannose binding lectin
THII_RS12835	PF01381	Helix-turn-helix
THII_RS12840	PF02347	Glycine cleavage system P-protein
THII_RS12845	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
THII_RS12850	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
THII_RS12850	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
THII_RS12855	PF02556	Preprotein translocase subunit SecB
THII_RS12860	PF00581	Rhodanese-like domain
THII_RS12865	PF11127	Protein of unknown function (DUF2892)
THII_RS12870	PF01022	Bacterial regulatory protein, arsR family
THII_RS12880	PF13531	Bacterial extracellular solute-binding protein
THII_RS12885	PF00528	Binding-protein-dependent transport system inner membrane component
THII_RS12890	PF00528	Binding-protein-dependent transport system inner membrane component
THII_RS12895	PF00005	ABC transporter
THII_RS12895	PF12857	THII_RS12895
THII_RS12900	PF04754	THII_RS12900
THII_RS12905	PF15891	THII_RS12905
THII_RS12910	PF01119	DNA mismatch repair protein, C-terminal domain
THII_RS12910	PF08676	MutL C terminal dimerisation domain
THII_RS12910	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS12915	PF00497	Bacterial extracellular solute-binding proteins, family 3
THII_RS12915	PF01464	Transglycosylase SLT domain
THII_RS12920	PF00406	Adenylate kinase
THII_RS12920	PF05191	Adenylate kinase, active site lid
THII_RS12930	PF05954	Phage late control gene D protein (GPD)
THII_RS12940	PF01710	Transposase
THII_RS12945	PF13358	DDE superfamily endonuclease
THII_RS12950	PF13358	DDE superfamily endonuclease
THII_RS12955	PF01710	Transposase
THII_RS12960	PF05954	Phage late control gene D protein (GPD)
THII_RS12965	PF00391	PEP-utilising enzyme, mobile domain
THII_RS12965	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
THII_RS12965	PF02896	PEP-utilising enzyme, TIM barrel domain
THII_RS12975	PF05860	haemagglutination activity domain
THII_RS12990	PF01724	Domain of unknown function DUF29
THII_RS12995	PF04384	Iron-sulphur cluster assembly
THII_RS13000	PF00111	2Fe-2S iron-sulfur cluster binding domain
THII_RS13005	PF00012	Hsp70 protein
THII_RS13010	PF07743	HSCB C-terminal oligomerisation domain
THII_RS13015	PF01521	Iron-sulphur cluster biosynthesis
THII_RS13025	PF13175	AAA ATPase domain
THII_RS13030	PF01592	NifU-like N terminal domain
THII_RS13035	PF00266	Aminotransferase class-V
THII_RS13040	PF02082	Transcriptional regulator
THII_RS13045	PF00535	Glycosyl transferase family 2
THII_RS13050	PF13641	Glycosyltransferase like family 2
THII_RS13055	PF00534	Glycosyl transferases group 1
THII_RS13060	PF00534	Glycosyl transferases group 1
THII_RS13075	PF01724	Domain of unknown function DUF29
THII_RS13080	PF00501	AMP-binding enzyme
THII_RS13085	PF01476	LysM domain
THII_RS13090	PF01476	LysM domain
THII_RS13100	PF00149	Calcineurin-like phosphoesterase
THII_RS13100	PF02872	5'-nucleotidase, C-terminal domain
THII_RS13105	PF01545	Cation efflux family
THII_RS13110	PF09335	THII_RS13110
THII_RS13135	PF09361	THII_RS13135
THII_RS13165	PF01850	PIN domain
THII_RS13170	PF01624	MutS domain I
THII_RS13170	PF05188	MutS domain II
THII_RS13170	PF05190	MutS family domain IV
THII_RS13170	PF05192	MutS domain III
THII_RS13175	PF00561	alpha/beta hydrolase fold
THII_RS13180	PF05954	Phage late control gene D protein (GPD)
THII_RS13185	PF01710	Transposase
THII_RS13185	PF13358	DDE superfamily endonuclease
THII_RS13200	PF10095	THII_RS13200
THII_RS13205	PF01137	RNA 3'-terminal phosphate cyclase
THII_RS13205	PF05189	RNA 3'-terminal phosphate cyclase (RTC), insert domain
THII_RS13210	PF01724	Domain of unknown function DUF29
THII_RS13215	PF00041	Fibronectin type III domain
THII_RS13215	PF00560	Leucine Rich Repeat
THII_RS13230	PF02036	SCP-2 sterol transfer family
THII_RS13235	PF01136	THII_RS13235
THII_RS13240	PF01136	THII_RS13240
THII_RS13245	PF04055	Radical SAM superfamily
THII_RS13245	PF16199	THII_RS13245
THII_RS13250	PF09828	THII_RS13250
THII_RS13255	PF02417	THII_RS13255
THII_RS13260	PF09828	THII_RS13260
THII_RS13265	PF13597	Anaerobic ribonucleoside-triphosphate reductase
THII_RS13270	PF13597	Anaerobic ribonucleoside-triphosphate reductase
THII_RS13275	PF13597	Anaerobic ribonucleoside-triphosphate reductase
THII_RS13280	PF04055	Radical SAM superfamily
THII_RS13280	PF13353	4Fe-4S single cluster domain
THII_RS13295	PF01710	Transposase
THII_RS13300	PF13358	DDE superfamily endonuclease
THII_RS13305	PF01872	RibD C-terminal domain
THII_RS13310	PF00534	Glycosyl transferases group 1
THII_RS13310	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
THII_RS13315	PF14085	THII_RS13315
THII_RS13320	PF13649	Methyltransferase domain
THII_RS13325	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
THII_RS13330	PF00990	GGDEF domain
THII_RS13335	PF00586	AIR synthase related protein, N-terminal domain
THII_RS13335	PF02769	AIR synthase related protein, C-terminal domain
THII_RS13340	PF01925	THII_RS13340
THII_RS13345	PF01027	Inhibitor of apoptosis-promoting Bax1
THII_RS13350	PF00005	ABC transporter
THII_RS13350	PF12848	ABC transporter
THII_RS13350	PF16326	THII_RS13350
THII_RS13355	PF05685	Putative restriction endonuclease
THII_RS13360	PF00072	Response regulator receiver domain
THII_RS13365	PF08334	Type II secretion system (T2SS), protein G
THII_RS13365	PF13633	Prokaryotic N-terminal methylation site
THII_RS13380	PF06051	THII_RS13380
THII_RS13405	PF13614	AAA domain
THII_RS13410	PF01555	DNA methylase
THII_RS13415	PF00226	DnaJ domain
THII_RS13415	PF00684	DnaJ central domain
THII_RS13415	PF01556	DnaJ C terminal domain
THII_RS13420	PF00012	Hsp70 protein
THII_RS13425	PF01025	GrpE
THII_RS13430	PF01628	HrcA protein C terminal domain
THII_RS13430	PF03444	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
THII_RS13435	PF01513	ATP-NAD kinase
THII_RS13440	PF04356	Protein of unknown function (DUF489)
THII_RS13450	PF05134	Type II secretion system (T2SS), protein L
THII_RS13450	PF12693	GspL periplasmic domain
THII_RS13455	PF00293	NUDIX domain
THII_RS13460	PF03054	tRNA methyl transferase
THII_RS13475	PF00994	Probable molybdopterin binding domain
THII_RS13475	PF03453	MoeA N-terminal region (domain I and II)
THII_RS13475	PF03454	MoeA C-terminal region (domain IV)
THII_RS13480	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
THII_RS13480	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
THII_RS13510	PF00009	Elongation factor Tu GTP binding domain
THII_RS13510	PF03143	Elongation factor Tu C-terminal domain
THII_RS13510	PF03144	Elongation factor Tu domain 2
THII_RS13520	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
THII_RS13525	PF00467	KOW motif
THII_RS13525	PF02357	Transcription termination factor nusG
THII_RS13530	PF00298	Ribosomal protein L11, RNA binding domain
THII_RS13530	PF03946	Ribosomal protein L11, N-terminal domain
THII_RS13535	PF00687	Ribosomal protein L1p/L10e family
THII_RS13540	PF00466	Ribosomal protein L10
THII_RS13545	PF00542	Ribosomal protein L7/L12 C-terminal domain
THII_RS13545	PF16320	THII_RS13545
THII_RS13550	PF00562	RNA polymerase Rpb2, domain 6
THII_RS13550	PF04560	RNA polymerase Rpb2, domain 7
THII_RS13550	PF04561	RNA polymerase Rpb2, domain 2
THII_RS13550	PF04563	RNA polymerase beta subunit
THII_RS13550	PF04565	RNA polymerase Rpb2, domain 3
THII_RS13550	PF10385	RNA polymerase beta subunit external 1 domain
THII_RS13555	PF00623	RNA polymerase Rpb1, domain 2
THII_RS13555	PF04983	RNA polymerase Rpb1, domain 3
THII_RS13555	PF04997	RNA polymerase Rpb1, domain 1
THII_RS13555	PF04998	RNA polymerase Rpb1, domain 5
THII_RS13555	PF05000	RNA polymerase Rpb1, domain 4
THII_RS13560	PF05685	Putative restriction endonuclease
THII_RS13565	PF13437	HlyD family secretion protein
THII_RS13565	PF13533	Biotin-lipoyl like
THII_RS13570	PF00005	ABC transporter
THII_RS13575	PF12698	ABC-2 family transporter protein
THII_RS13585	PF00005	ABC transporter
THII_RS13620	PF00270	DEAD/DEAH box helicase
THII_RS13620	PF00271	Helicase conserved C-terminal domain
THII_RS13620	PF02559	CarD-like/TRCF domain
THII_RS13620	PF03461	TRCF domain
THII_RS13625	PF02091	Glycyl-tRNA synthetase alpha subunit
THII_RS13630	PF02092	THII_RS13630
THII_RS13630	PF05746	DALR anticodon binding domain
THII_RS13635	PF01724	Domain of unknown function DUF29
THII_RS13640	PF00692	dUTPase
THII_RS13645	PF00072	Response regulator receiver domain
THII_RS13645	PF00158	Sigma-54 interaction domain
THII_RS13645	PF02954	Bacterial regulatory protein, Fis family
THII_RS13650	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS13650	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS13650	PF13188	PAS domain
THII_RS13660	PF01029	NusB family
THII_RS13665	PF00885	6,7-dimethyl-8-ribityllumazine synthase
THII_RS13670	PF00925	GTP cyclohydrolase II
THII_RS13670	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
THII_RS13675	PF05940	THII_RS13675
THII_RS13680	PF13453	THII_RS13680
THII_RS13685	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
THII_RS13685	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
THII_RS13690	PF12769	Domain of unknown function (DUF3814)
THII_RS13695	PF02233	NAD(P) transhydrogenase beta subunit
THII_RS13700	PF00313	'Cold-shock' DNA-binding domain
THII_RS13705	PF01565	FAD binding domain
THII_RS13705	PF02913	FAD linked oxidases, C-terminal domain
THII_RS13720	PF13544	THII_RS13720
THII_RS13740	PF13340	THII_RS13740
THII_RS13745	PF00005	ABC transporter
THII_RS13755	PF05128	THII_RS13755
THII_RS13760	PF13458	Periplasmic binding protein
THII_RS13765	PF01145	SPFH domain / Band 7 family
THII_RS13775	PF00400	WD domain, G-beta repeat
THII_RS13775	PF00656	Caspase domain
THII_RS13775	PF01471	Putative peptidoglycan binding domain
THII_RS13780	PF02321	Outer membrane efflux protein
THII_RS13785	PF00884	Sulfatase
THII_RS13790	PF00884	Sulfatase
THII_RS13795	PF07993	Male sterility protein
THII_RS13800	PF00501	AMP-binding enzyme
THII_RS13800	PF00550	Phosphopantetheine attachment site
THII_RS13800	PF00668	Condensation domain
THII_RS13800	PF08242	Methyltransferase domain
THII_RS13825	PF09924	Uncharacterized conserved protein (DUF2156)
THII_RS13830	PF00122	E1-E2 ATPase
THII_RS13830	PF00702	haloacid dehalogenase-like hydrolase
THII_RS13835	PF06723	MreB/Mbl protein
THII_RS13845	PF00122	E1-E2 ATPase
THII_RS13845	PF00702	haloacid dehalogenase-like hydrolase
THII_RS13850	PF00550	Phosphopantetheine attachment site
THII_RS13860	PF00501	AMP-binding enzyme
THII_RS13860	PF13193	AMP-binding enzyme C-terminal domain
THII_RS13865	PF01947	Protein of unknown function (DUF98)
THII_RS13870	PF03567	Sulfotransferase family
THII_RS13875	PF02543	Carbamoyltransferase
THII_RS13875	PF16861	THII_RS13875
THII_RS13880	PF04055	Radical SAM superfamily
THII_RS13885	PF00034	Cytochrome c
THII_RS13890	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
THII_RS13890	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
THII_RS13890	PF11890	Domain of unknown function (DUF3410)
THII_RS13900	PF01494	FAD binding domain
THII_RS13905	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
THII_RS13905	PF06827	Zinc finger found in FPG and IleRS
THII_RS13905	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
THII_RS13915	PF06564	YhjQ protein
THII_RS13915	PF09968	Uncharacterized protein domain (DUF2202)
THII_RS13920	PF10861	THII_RS13920
THII_RS13925	PF02580	D-Tyr-tRNA(Tyr) deacylase
THII_RS13930	PF01668	SmpB protein
THII_RS13935	PF03364	Polyketide cyclase / dehydrase and lipid transport
THII_RS13940	PF03658	RnfH family Ubiquitin
THII_RS13945	PF04355	SmpA / OmlA family
THII_RS13950	PF01475	Ferric uptake regulator family
THII_RS13955	PF00294	pfkB family carbohydrate kinase
THII_RS13960	PF00294	pfkB family carbohydrate kinase
THII_RS13965	PF08481	THII_RS13965
THII_RS13970	PF01040	UbiA prenyltransferase family
THII_RS13975	PF13231	THII_RS13975
THII_RS13990	PF01266	FAD dependent oxidoreductase
THII_RS13990	PF05199	GMC oxidoreductase
THII_RS13995	PF04922	THII_RS13995
THII_RS14000	PF00075	RNase H
THII_RS14005	PF08241	Methyltransferase domain
THII_RS14010	PF02575	YbaB/EbfC DNA-binding family
THII_RS14015	PF12169	DNA polymerase III subunits gamma and tau domain III
THII_RS14015	PF12170	DNA polymerase III tau subunit V interacting with alpha
THII_RS14015	PF13177	DNA polymerase III, delta subunit
THII_RS14020	PF01724	Domain of unknown function DUF29
THII_RS14025	PF01381	Helix-turn-helix
THII_RS14030	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
THII_RS14035	PF05016	Plasmid stabilisation system protein
THII_RS14040	PF03061	Thioesterase superfamily
THII_RS14045	PF03706	THII_RS14045
THII_RS14050	PF07690	Major Facilitator Superfamily
THII_RS14060	PF00072	Response regulator receiver domain
THII_RS14070	PF00472	RF-1 domain
THII_RS14070	PF03462	PCRF domain
THII_RS14075	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
THII_RS14075	PF01488	Shikimate / quinate 5-dehydrogenase
THII_RS14075	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
THII_RS14085	PF08334	Type II secretion system (T2SS), protein G
THII_RS14085	PF13633	Prokaryotic N-terminal methylation site
THII_RS14090	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
THII_RS14090	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
THII_RS14090	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
THII_RS14090	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
THII_RS14105	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
THII_RS14105	PF03466	LysR substrate binding domain
THII_RS14110	PF10047	THII_RS14110
THII_RS14115	PF01594	THII_RS14115
THII_RS14120	PF05154	THII_RS14120
THII_RS14125	PF06271	THII_RS14125
THII_RS14130	PF05685	Putative restriction endonuclease
THII_RS14135	PF01944	THII_RS14135
THII_RS14145	PF13559	THII_RS14145
THII_RS14150	PF16277	THII_RS14150
THII_RS14160	PF00871	Acetokinase family
THII_RS14170	PF13614	AAA domain
THII_RS14175	PF01724	Domain of unknown function DUF29
THII_RS14180	PF08780	Nucleotidyltransferase substrate binding protein like
THII_RS14185	PF01909	Nucleotidyltransferase domain
THII_RS14190	PF00963	Cohesin domain
THII_RS14205	PF00656	Caspase domain
THII_RS14220	PF12770	THII_RS14220
THII_RS14220	PF13181	Tetratricopeptide repeat
THII_RS14220	PF13424	Tetratricopeptide repeat
THII_RS14225	PF14076	THII_RS14225
THII_RS14235	PF05860	haemagglutination activity domain
THII_RS14240	PF02239	Cytochrome D1 heme domain
THII_RS14240	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
THII_RS14245	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
THII_RS14250	PF02239	Cytochrome D1 heme domain
THII_RS14270	PF13404	AsnC-type helix-turn-helix domain
THII_RS14275	PF04055	Radical SAM superfamily
THII_RS14275	PF13353	4Fe-4S single cluster domain
THII_RS14285	PF13473	Cupredoxin-like domain
THII_RS14290	PF00034	Cytochrome c
THII_RS14290	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
THII_RS14300	PF01814	Hemerythrin HHE cation binding domain
THII_RS14305	PF05048	Periplasmic copper-binding protein (NosD)
THII_RS14310	PF12838	4Fe-4S dicluster domain
THII_RS14315	PF12801	THII_RS14315
THII_RS14320	PF00005	ABC transporter
THII_RS14325	PF05573	NosL
THII_RS14330	PF12679	THII_RS14330
THII_RS14360	PF01925	THII_RS14360
THII_RS14380	PF10043	THII_RS14380
THII_RS14385	PF00391	PEP-utilising enzyme, mobile domain
THII_RS14385	PF02896	PEP-utilising enzyme, TIM barrel domain
THII_RS14385	PF05524	PEP-utilising enzyme, N-terminal
THII_RS14390	PF00381	PTS HPr component phosphorylation site
THII_RS14395	PF03610	PTS system fructose IIA component
THII_RS14400	PF03668	THII_RS14400
THII_RS14405	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
THII_RS14405	PF05221	S-adenosyl-L-homocysteine hydrolase
THII_RS14410	PF00438	S-adenosylmethionine synthetase, N-terminal domain
THII_RS14410	PF02772	S-adenosylmethionine synthetase, central domain
THII_RS14410	PF02773	S-adenosylmethionine synthetase, C-terminal domain
THII_RS14415	PF00117	Glutamine amidotransferase class-I
THII_RS14415	PF06418	CTP synthase N-terminus
THII_RS14420	PF00140	Sigma-70 factor, region 1
THII_RS14420	PF04539	Sigma-70 region 3
THII_RS14420	PF04542	Sigma-70 region 2
THII_RS14420	PF04545	Sigma-70, region 4
THII_RS14425	PF00829	Ribosomal prokaryotic L21 protein
THII_RS14430	PF01016	Ribosomal L27 protein
THII_RS14435	PF01018	GTP1/OBG
THII_RS14435	PF01926	50S ribosome-binding GTPase
THII_RS14440	PF04402	Protein of unknown function (DUF541)
THII_RS14450	PF14076	THII_RS14450
THII_RS14455	PF02195	ParB-like nuclease domain
THII_RS14460	PF01935	Domain of unknown function DUF87
THII_RS14460	PF05872	THII_RS14460
THII_RS14470	PF15738	THII_RS14470
THII_RS14485	PF00027	Cyclic nucleotide-binding domain
THII_RS14485	PF06210	THII_RS14485
THII_RS14500	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
THII_RS14500	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
THII_RS14505	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
THII_RS14505	PF02874	ATP synthase alpha/beta family, beta-barrel domain
THII_RS14510	PF00231	ATP synthase
THII_RS14520	PF00677	Lumazine binding domain
THII_RS14525	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
THII_RS14525	PF00306	ATP synthase alpha/beta chain, C terminal domain
THII_RS14525	PF02874	ATP synthase alpha/beta family, beta-barrel domain
THII_RS14530	PF00213	ATP synthase delta (OSCP) subunit
THII_RS14535	PF00430	ATP synthase B/B' CF(0)
THII_RS14540	PF00137	ATP synthase subunit C
THII_RS14545	PF00119	ATP synthase A chain
THII_RS14550	PF03899	THII_RS14550
THII_RS14565	PF13578	Methyltransferase domain
THII_RS14570	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
THII_RS14575	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
THII_RS14575	PF01059	THII_RS14575
THII_RS14580	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
THII_RS14580	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
THII_RS14585	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
THII_RS14590	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
THII_RS14595	PF00027	Cyclic nucleotide-binding domain
THII_RS14600	PF07661	THII_RS14600
THII_RS14605	PF12838	4Fe-4S dicluster domain
THII_RS14610	PF00146	NADH dehydrogenase
THII_RS14615	PF00384	Molybdopterin oxidoreductase
THII_RS14615	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
THII_RS14615	PF13510	2Fe-2S iron-sulfur cluster binding domain
THII_RS14640	PF00290	Tryptophan synthase alpha chain
THII_RS14645	PF00291	Pyridoxal-phosphate dependent enzyme
THII_RS14650	PF01757	THII_RS14650
THII_RS14660	PF00515	Tetratricopeptide repeat
THII_RS14665	PF04430	Protein of unknown function (DUF498/DUF598)
THII_RS14670	PF03372	Endonuclease/Exonuclease/phosphatase family
THII_RS14675	PF02503	Polyphosphate kinase middle domain
THII_RS14675	PF13089	Polyphosphate kinase N-terminal domain
THII_RS14675	PF13090	Polyphosphate kinase C-terminal domain
THII_RS14680	PF00989	PAS fold
THII_RS14680	PF08447	PAS fold
THII_RS14680	PF08448	PAS fold
THII_RS14680	PF13188	PAS domain
THII_RS14680	PF13426	PAS domain
THII_RS14680	PF13596	PAS domain
THII_RS14690	PF00092	von Willebrand factor type A domain
THII_RS14690	PF13531	Bacterial extracellular solute-binding protein
THII_RS14695	PF01406	tRNA synthetases class I (C) catalytic domain
THII_RS14695	PF09190	DALR domain
THII_RS14700	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS14705	PF02492	CobW/HypB/UreG, nucleotide-binding domain
THII_RS14710	PF05685	Putative restriction endonuclease
THII_RS14720	PF00072	Response regulator receiver domain
THII_RS14720	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS14720	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS14730	PF00437	Type II/IV secretion system protein
THII_RS14730	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
THII_RS14735	PF13641	Glycosyltransferase like family 2
THII_RS14740	PF00534	Glycosyl transferases group 1
THII_RS14740	PF13439	Glycosyltransferase Family 4
THII_RS14745	PF01168	Alanine racemase, N-terminal domain
THII_RS14750	PF00072	Response regulator receiver domain
THII_RS14750	PF00158	Sigma-54 interaction domain
THII_RS14755	PF01649	Ribosomal protein S20
THII_RS14760	PF01724	Domain of unknown function DUF29
THII_RS14770	PF01797	Transposase IS200 like
THII_RS14775	PF13847	Methyltransferase domain
THII_RS14780	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
THII_RS14785	PF17137	THII_RS14785
THII_RS14795	PF01841	Transglutaminase-like superfamily
THII_RS14805	PF03050	THII_RS14805
THII_RS14825	PF05685	Putative restriction endonuclease
THII_RS14835	PF05036	Sporulation related domain
THII_RS14840	PF00750	tRNA synthetases class I (R)
THII_RS14840	PF03485	Arginyl tRNA synthetase N terminal domain
THII_RS14840	PF05746	DALR anticodon binding domain
THII_RS14845	PF06769	Plasmid encoded toxin Txe
THII_RS14850	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
THII_RS14855	PF07927	YcfA-like protein
THII_RS14865	PF01381	Helix-turn-helix
THII_RS14875	PF00009	Elongation factor Tu GTP binding domain
THII_RS14875	PF00679	Elongation factor G C-terminus
THII_RS14875	PF03764	Elongation factor G, domain IV
THII_RS14875	PF14492	Elongation Factor G, domain II
THII_RS14885	PF01336	OB-fold nucleic acid binding domain
THII_RS14885	PF02811	PHP domain
THII_RS14885	PF07733	Bacterial DNA polymerase III alpha subunit
THII_RS14885	PF14579	Helix-hairpin-helix motif
THII_RS14935	PF13358	DDE superfamily endonuclease
THII_RS14945	PF02463	RecF/RecN/SMC N terminal domain
THII_RS14950	PF00106	short chain dehydrogenase
THII_RS14955	PF01565	FAD binding domain
THII_RS14960	PF02769	AIR synthase related protein, C-terminal domain
THII_RS14960	PF13507	CobB/CobQ-like glutamine amidotransferase domain
THII_RS14970	PF01979	Amidohydrolase family
THII_RS14975	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
THII_RS14980	PF10047	THII_RS14980
THII_RS14995	PF02627	Carboxymuconolactone decarboxylase family
THII_RS15000	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
THII_RS15000	PF03459	TOBE domain
THII_RS15005	PF13531	Bacterial extracellular solute-binding protein
THII_RS15010	PF10387	Protein of unknown function (DUF2442)
THII_RS15015	PF13711	THII_RS15015
THII_RS15020	PF00092	von Willebrand factor type A domain
THII_RS15025	PF04307	THII_RS15025
THII_RS15030	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS15030	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS15030	PF11808	THII_RS15030
THII_RS15035	PF00072	Response regulator receiver domain
THII_RS15035	PF00486	Transcriptional regulatory protein, C terminal
THII_RS15040	PF00294	pfkB family carbohydrate kinase
THII_RS15045	PF00069	Protein kinase domain
THII_RS15045	PF05226	THII_RS15045
THII_RS15050	PF13672	Protein phosphatase 2C
THII_RS15055	PF13672	Protein phosphatase 2C
THII_RS15060	PF03548	Outer membrane lipoprotein carrier protein LolA
THII_RS15075	PF00069	Protein kinase domain
THII_RS15075	PF00990	GGDEF domain
THII_RS15075	PF01590	GAF domain
THII_RS15075	PF08448	PAS fold
THII_RS15075	PF13191	AAA ATPase domain
THII_RS15085	PF02369	Bacterial Ig-like domain (group 1)
THII_RS15085	PF09134	Invasin, domain 3
THII_RS15090	PF03160	Calx-beta domain
THII_RS15095	PF00782	Dual specificity phosphatase, catalytic domain
THII_RS15110	PF06144	DNA polymerase III, delta subunit
THII_RS15110	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
THII_RS15120	PF01564	Spermine/spermidine synthase
THII_RS15125	PF01040	UbiA prenyltransferase family
THII_RS15130	PF03160	Calx-beta domain
THII_RS15150	PF00483	Nucleotidyl transferase
THII_RS15150	PF01050	Mannose-6-phosphate isomerase
THII_RS15155	PF07992	Pyridine nucleotide-disulphide oxidoreductase
THII_RS15155	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
THII_RS15160	PF00266	Aminotransferase class-V
THII_RS15165	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
THII_RS15165	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
THII_RS15175	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS15175	PF00672	HAMP domain
THII_RS15175	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS15175	PF08521	THII_RS15175
THII_RS15180	PF00072	Response regulator receiver domain
THII_RS15180	PF00486	Transcriptional regulatory protein, C terminal
THII_RS15200	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS15205	PF01926	50S ribosome-binding GTPase
THII_RS15205	PF10396	GTP-binding protein TrmE N-terminus
THII_RS15205	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
THII_RS15225	PF04257	Exodeoxyribonuclease V, gamma subunit
THII_RS15230	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
THII_RS15235	PF00448	SRP54-type protein, GTPase domain
THII_RS15235	PF02881	SRP54-type protein, helical bundle domain
THII_RS15235	PF02978	Signal peptide binding domain
THII_RS15240	PF00005	ABC transporter
THII_RS15240	PF12848	ABC transporter
THII_RS15265	PF00795	Carbon-nitrogen hydrolase
THII_RS15265	PF02540	NAD synthase
THII_RS15270	PF05690	Thiazole biosynthesis protein ThiG
THII_RS15275	PF05685	Putative restriction endonuclease
THII_RS15285	PF15919	THII_RS15285
THII_RS15290	PF04319	THII_RS15290
THII_RS15295	PF03206	THII_RS15295
THII_RS15305	PF00682	HMGL-like
THII_RS15320	PF12644	THII_RS15320
THII_RS15325	PF03190	Protein of unknown function, DUF255
THII_RS15330	PF02219	Methylenetetrahydrofolate reductase
THII_RS15335	PF00072	Response regulator receiver domain
THII_RS15335	PF00158	Sigma-54 interaction domain
THII_RS15335	PF02954	Bacterial regulatory protein, Fis family
THII_RS15340	PF13401	AAA domain
THII_RS15345	PF00263	THII_RS15345
THII_RS15345	PF07655	THII_RS15345
THII_RS15350	PF01809	THII_RS15350
THII_RS15355	PF00004	ATPase family associated with various cellular activities (AAA)
THII_RS15355	PF02190	ATP-dependent protease La (LON) domain
THII_RS15355	PF05362	Lon protease (S16) C-terminal proteolytic domain
THII_RS15360	PF00575	S1 RNA binding domain
THII_RS15360	PF00773	RNB domain
THII_RS15360	PF08206	Ribonuclease B OB domain
THII_RS15360	PF08461	Ribonuclease R winged-helix domain
THII_RS15370	PF00132	Bacterial transferase hexapeptide (six repeats)
THII_RS15380	PF00571	CBS domain
THII_RS15380	PF01595	THII_RS15380
THII_RS15380	PF03471	Transporter associated domain
THII_RS15390	PF12139	Adenosine-5'-phosphosulfate reductase beta subunit
THII_RS15390	PF13187	4Fe-4S dicluster domain
THII_RS15395	PF00890	FAD binding domain
THII_RS15395	PF02910	Fumarate reductase flavoprotein C-term
THII_RS15405	PF01734	Patatin-like phospholipase
THII_RS15415	PF01322	Cytochrome C'
THII_RS15420	PF00034	Cytochrome c
THII_RS15425	PF16576	THII_RS15425
THII_RS15430	PF00005	ABC transporter
THII_RS15435	PF02687	THII_RS15435
THII_RS15435	PF12704	MacB-like periplasmic core domain
THII_RS15440	PF02412	Thrombospondin type 3 repeat
THII_RS15445	PF01710	Transposase
THII_RS15455	PF05685	Putative restriction endonuclease
THII_RS15460	PF02719	Polysaccharide biosynthesis protein
THII_RS15460	PF13727	CoA-binding domain
THII_RS15465	PF02397	THII_RS15465
THII_RS15470	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
THII_RS15475	PF13472	GDSL-like Lipase/Acylhydrolase family
THII_RS15480	PF00534	Glycosyl transferases group 1
THII_RS15480	PF13579	Glycosyl transferase 4-like domain
THII_RS15485	PF10092	THII_RS15485
THII_RS15490	PF04891	THII_RS15490
THII_RS15495	PF00111	2Fe-2S iron-sulfur cluster binding domain
THII_RS15500	PF00111	2Fe-2S iron-sulfur cluster binding domain
THII_RS15505	PF00258	Flavodoxin
THII_RS15505	PF00753	Metallo-beta-lactamase superfamily
THII_RS15510	PF00037	4Fe-4S binding domain
THII_RS15515	PF02579	Dinitrogenase iron-molybdenum cofactor
THII_RS15515	PF04055	Radical SAM superfamily
THII_RS15525	PF08263	Leucine rich repeat N-terminal domain
THII_RS15525	PF12799	Leucine Rich repeats (2 copies)
THII_RS15535	PF07992	Pyridine nucleotide-disulphide oxidoreductase
THII_RS15540	PF13847	Methyltransferase domain
THII_RS15545	PF13453	THII_RS15545
THII_RS15550	PF08443	RimK-like ATP-grasp domain
THII_RS15550	PF14401	THII_RS15550
THII_RS15555	PF11814	THII_RS15555
THII_RS15555	PF13673	Acetyltransferase (GNAT) domain
THII_RS15560	PF00248	Aldo/keto reductase family
THII_RS15565	PF00400	WD domain, G-beta repeat
THII_RS15570	PF00400	WD domain, G-beta repeat
THII_RS15575	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS15575	PF00672	HAMP domain
THII_RS15575	PF05228	THII_RS15575
THII_RS15580	PF04932	THII_RS15580
THII_RS15585	PF06051	THII_RS15585
THII_RS15595	PF00072	Response regulator receiver domain
THII_RS15595	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS15595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS15595	PF12729	THII_RS15595
THII_RS15600	PF13379	NMT1-like family
THII_RS15605	PF05015	Plasmid maintenance system killer protein
THII_RS15610	PF01381	Helix-turn-helix
THII_RS15620	PF05226	THII_RS15620
THII_RS15625	PF00953	Glycosyl transferase family 4
THII_RS15630	PF01370	NAD dependent epimerase/dehydratase family
THII_RS15635	PF01435	Peptidase family M48
THII_RS15640	PF05685	Putative restriction endonuclease
THII_RS15655	PF00494	Squalene/phytoene synthase
THII_RS15660	PF04168	THII_RS15660
THII_RS15660	PF14403	THII_RS15660
THII_RS15685	PF04453	Organic solvent tolerance protein
THII_RS15690	PF01259	SAICAR synthetase
THII_RS15695	PF01464	Transglycosylase SLT domain
THII_RS15705	PF01578	THII_RS15705
THII_RS15705	PF16327	THII_RS15705
THII_RS15710	PF03100	CcmE
THII_RS15715	PF04995	THII_RS15715
THII_RS15720	PF13531	Bacterial extracellular solute-binding protein
THII_RS15730	PF02369	Bacterial Ig-like domain (group 1)
THII_RS15745	PF00005	ABC transporter
THII_RS15750	PF13435	Cytochrome c554 and c-prime
THII_RS15755	PF05685	Putative restriction endonuclease
THII_RS15760	PF00132	Bacterial transferase hexapeptide (six repeats)
THII_RS15760	PF14602	Hexapeptide repeat of succinyl-transferase
THII_RS15765	PF00583	Acetyltransferase (GNAT) family
THII_RS15765	PF00696	Amino acid kinase family
THII_RS15775	PF01546	Peptidase family M20/M25/M40
THII_RS15775	PF07687	Peptidase dimerisation domain
THII_RS15780	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
THII_RS15780	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
THII_RS15785	PF08269	Cache domain
THII_RS15790	PF07929	Plasmid pRiA4b ORF-3-like protein
THII_RS15805	PF01136	THII_RS15805
THII_RS15805	PF16325	THII_RS15805
THII_RS15810	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
THII_RS15810	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
THII_RS15815	PF02464	Competence-damaged protein
THII_RS15820	PF06572	Protein of unknown function (DUF1131)
THII_RS15820	PF07007	Protein of unknown function (DUF1311)
THII_RS15830	PF05685	Putative restriction endonuclease
THII_RS15840	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
THII_RS15840	PF09363	XFP C-terminal domain
THII_RS15840	PF09364	XFP N-terminal domain
THII_RS15845	PF01891	Cobalt uptake substrate-specific transmembrane region
THII_RS15850	PF03808	THII_RS15850
THII_RS15855	PF01370	NAD dependent epimerase/dehydratase family
THII_RS15860	PF04055	Radical SAM superfamily
THII_RS15865	PF01814	Hemerythrin HHE cation binding domain
THII_RS15870	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
THII_RS15875	PF05685	Putative restriction endonuclease
THII_RS15880	PF03116	THII_RS15880
THII_RS15885	PF10092	THII_RS15885
THII_RS15895	PF05523	WxcM-like, C-terminal
THII_RS15905	PF13419	Haloacid dehalogenase-like hydrolase
THII_RS15915	PF00533	BRCA1 C Terminus (BRCT) domain
THII_RS15915	PF01653	NAD-dependent DNA ligase adenylation domain
THII_RS15915	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
THII_RS15915	PF03120	NAD-dependent DNA ligase OB-fold domain
THII_RS15915	PF12826	Helix-hairpin-helix motif
THII_RS15915	PF14520	Helix-hairpin-helix domain
THII_RS15930	PF05685	Putative restriction endonuclease
THII_RS15940	PF00708	Acylphosphatase
THII_RS15940	PF01300	Telomere recombination
THII_RS15940	PF07503	HypF finger
THII_RS15945	PF05681	THII_RS15945
THII_RS15945	PF05683	Fumarase C-terminus
THII_RS15950	PF05685	Putative restriction endonuclease
THII_RS15965	PF01850	PIN domain
THII_RS15985	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
THII_RS15985	PF02785	Biotin carboxylase C-terminal domain
THII_RS15985	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
THII_RS15990	PF00364	Biotin-requiring enzyme
THII_RS15995	PF01220	Dehydroquinase class II
THII_RS16010	PF00440	Bacterial regulatory proteins, tetR family
THII_RS16015	PF16576	THII_RS16015
THII_RS16020	PF00873	AcrB/AcrD/AcrF family
THII_RS16035	PF01713	Smr domain
THII_RS16040	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
THII_RS16040	PF03900	Porphobilinogen deaminase, C-terminal domain
THII_RS16045	PF13614	AAA domain
THII_RS16065	PF12784	THII_RS16065
THII_RS16070	PF01724	Domain of unknown function DUF29
THII_RS16075	PF06165	Glycosyltransferase family 36
THII_RS16075	PF10091	Putative glucoamylase
THII_RS16075	PF17167	THII_RS16075
THII_RS16080	PF00027	Cyclic nucleotide-binding domain
THII_RS16080	PF13545	Crp-like helix-turn-helix domain
THII_RS16100	PF04366	THII_RS16100
THII_RS16105	PF04972	BON domain
THII_RS16110	PF05532	CsbD-like
THII_RS16115	PF13358	DDE superfamily endonuclease
THII_RS16125	PF05088	THII_RS16125
THII_RS16130	PF03918	Cytochrome C biogenesis protein
THII_RS16135	PF13432	Tetratricopeptide repeat
THII_RS16140	PF00805	Pentapeptide repeats (8 copies)
THII_RS16145	PF07788	THII_RS16145
THII_RS16145	PF12644	THII_RS16145
THII_RS16155	PF05685	Putative restriction endonuclease
THII_RS16160	PF01724	Domain of unknown function DUF29
THII_RS16165	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
THII_RS16165	PF07992	Pyridine nucleotide-disulphide oxidoreductase
THII_RS16180	PF00384	Molybdopterin oxidoreductase
THII_RS16180	PF01568	Molydopterin dinucleotide binding domain
THII_RS16180	PF10518	TAT (twin-arginine translocation) pathway signal sequence
THII_RS16185	PF12800	4Fe-4S binding domain
THII_RS16185	PF13247	4Fe-4S dicluster domain
THII_RS16190	PF02613	Nitrate reductase delta subunit
THII_RS16200	PF14464	Prokaryotic homologs of the JAB domain
THII_RS16205	PF07963	Prokaryotic N-terminal methylation motif
THII_RS16210	PF13633	Prokaryotic N-terminal methylation site
THII_RS16215	PF13544	THII_RS16215
THII_RS16215	PF16074	THII_RS16215
THII_RS16225	PF05567	Neisseria PilC beta-propeller domain
THII_RS16230	PF16732	THII_RS16230
THII_RS16250	PF03130	PBS lyase HEAT-like repeat
THII_RS16265	PF00472	RF-1 domain
THII_RS16265	PF03462	PCRF domain
THII_RS16270	PF03775	Septum formation inhibitor MinC, C-terminal domain
THII_RS16270	PF05209	Septum formation inhibitor MinC, N-terminal domain
THII_RS16275	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
THII_RS16280	PF03776	Septum formation topological specificity factor MinE
THII_RS16290	PF00801	PKD domain
THII_RS16290	PF04151	Bacterial pre-peptidase C-terminal domain
THII_RS16300	PF00793	DAHP synthetase I family
THII_RS16305	PF07021	Methionine biosynthesis protein MetW
THII_RS16310	PF00561	alpha/beta hydrolase fold
THII_RS16315	PF00588	SpoU rRNA Methylase family
THII_RS16320	PF05954	Phage late control gene D protein (GPD)
THII_RS16325	PF09937	THII_RS16325
THII_RS16340	PF01797	Transposase IS200 like
THII_RS16350	PF13358	DDE superfamily endonuclease
THII_RS16355	PF13518	Helix-turn-helix domain
THII_RS16360	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
THII_RS16370	PF01923	Cobalamin adenosyltransferase
THII_RS16375	PF00482	Type II secretion system (T2SS), protein F
THII_RS16380	PF09594	THII_RS16380
THII_RS16385	PF01292	Prokaryotic cytochrome b561
THII_RS16390	PF00578	AhpC/TSA family
THII_RS16390	PF10417	C-terminal domain of 1-Cys peroxiredoxin
THII_RS16395	PF04230	THII_RS16395
THII_RS16400	PF13847	Methyltransferase domain
THII_RS16410	PF05853	Prokaryotic protein of unknown function (DUF849)
THII_RS16415	PF13508	Acetyltransferase (GNAT) domain
THII_RS16425	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
THII_RS16425	PF03466	LysR substrate binding domain
THII_RS16430	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
THII_RS16430	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
THII_RS16435	PF00101	Ribulose bisphosphate carboxylase, small chain
THII_RS16445	PF14279	THII_RS16445
THII_RS16450	PF00374	Nickel-dependent hydrogenase
THII_RS16455	PF08241	Methyltransferase domain
THII_RS16460	PF01724	Domain of unknown function DUF29
THII_RS16470	PF01895	PhoU domain
THII_RS16475	PF00005	ABC transporter
THII_RS16480	PF00528	Binding-protein-dependent transport system inner membrane component
THII_RS16485	PF00528	Binding-protein-dependent transport system inner membrane component
THII_RS16490	PF01242	6-pyruvoyl tetrahydropterin synthase
THII_RS16500	PF04247	THII_RS16500
THII_RS16505	PF03167	Uracil DNA glycosylase superfamily
THII_RS16510	PF03993	THII_RS16510
THII_RS16515	PF13202	EF hand
THII_RS16525	PF01894	Uncharacterised protein family UPF0047
THII_RS16530	PF04381	Putative exonuclease, RdgC
THII_RS16535	PF04754	THII_RS16535
THII_RS16545	PF00139	Legume lectin domain
THII_RS16565	PF01116	Fructose-bisphosphate aldolase class-II
THII_RS16570	PF00224	Pyruvate kinase, barrel domain
THII_RS16570	PF02887	Pyruvate kinase, alpha/beta domain
THII_RS16575	PF00162	Phosphoglycerate kinase
THII_RS16580	PF00471	Ribosomal protein L33
THII_RS16590	PF00809	Pterin binding enzyme
THII_RS16590	PF02310	B12 binding domain
THII_RS16590	PF02574	Homocysteine S-methyltransferase
THII_RS16590	PF02607	B12 binding domain
THII_RS16590	PF02965	Vitamin B12 dependent methionine synthase, activation domain
THII_RS16595	PF01435	Peptidase family M48
THII_RS16600	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS16600	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS16600	PF17149	THII_RS16600
THII_RS16605	PF00497	Bacterial extracellular solute-binding proteins, family 3
THII_RS16610	PF00027	Cyclic nucleotide-binding domain
THII_RS16610	PF00924	Mechanosensitive ion channel
THII_RS16610	PF13458	Periplasmic binding protein
THII_RS16615	PF00924	Mechanosensitive ion channel
THII_RS16615	PF13458	Periplasmic binding protein
THII_RS16625	PF03781	Sulfatase-modifying factor enzyme 1
THII_RS16625	PF12867	DinB superfamily
THII_RS16630	PF10017	THII_RS16630
THII_RS16640	PF01724	Domain of unknown function DUF29
THII_RS16645	PF00445	Ribonuclease T2 family
THII_RS16650	PF02452	PemK-like protein
THII_RS16670	PF04255	Protein of unknown function (DUF433)
THII_RS16675	PF13358	DDE superfamily endonuclease
THII_RS16680	PF00549	CoA-ligase
THII_RS16680	PF02629	CoA binding domain
THII_RS16685	PF00549	CoA-ligase
THII_RS16685	PF08442	ATP-grasp domain
THII_RS16690	PF14437	THII_RS16690
THII_RS16695	PF03129	Anticodon binding domain
THII_RS16695	PF13393	Histidyl-tRNA synthetase
THII_RS16700	PF09976	Tetratricopeptide repeat
THII_RS16705	PF13360	PQQ-like domain
THII_RS16710	PF03235	THII_RS16710
THII_RS16735	PF07228	Stage II sporulation protein E (SpoIIE)
THII_RS16750	PF13304	AAA domain
THII_RS16755	PF05860	haemagglutination activity domain
THII_RS16775	PF01850	PIN domain
THII_RS16785	PF12784	THII_RS16785
THII_RS16790	PF00041	Fibronectin type III domain
THII_RS16790	PF08263	Leucine rich repeat N-terminal domain
THII_RS16790	PF13855	Leucine rich repeat
THII_RS16795	PF04909	Amidohydrolase
THII_RS16805	PF00155	Aminotransferase class I and II
THII_RS16810	PF00800	Prephenate dehydratase
THII_RS16810	PF01817	Chorismate mutase type II
THII_RS16810	PF01842	ACT domain
THII_RS16815	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
THII_RS16820	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
THII_RS16830	PF00106	short chain dehydrogenase
THII_RS16835	PF01436	NHL repeat
THII_RS16840	PF02585	GlcNAc-PI de-N-acetylase
THII_RS16845	PF13641	Glycosyltransferase like family 2
THII_RS16850	PF00482	Type II secretion system (T2SS), protein F
THII_RS16855	PF00155	Aminotransferase class I and II
THII_RS16860	PF00742	Homoserine dehydrogenase
THII_RS16860	PF01842	ACT domain
THII_RS16860	PF03447	Homoserine dehydrogenase, NAD binding domain
THII_RS16880	PF03840	Preprotein translocase SecG subunit
THII_RS16885	PF00121	Triosephosphate isomerase
THII_RS16895	PF00815	Histidinol dehydrogenase
THII_RS16900	PF00475	Imidazoleglycerol-phosphate dehydratase
THII_RS16900	PF13419	Haloacid dehalogenase-like hydrolase
THII_RS16905	PF01814	Hemerythrin HHE cation binding domain
THII_RS16910	PF01724	Domain of unknown function DUF29
THII_RS16915	PF00041	Fibronectin type III domain
THII_RS16915	PF01364	Peptidase family C25
THII_RS16915	PF03785	Peptidase family C25, C terminal ig-like domain
THII_RS16915	PF08126	Propeptide_C25
THII_RS16915	PF08263	Leucine rich repeat N-terminal domain
THII_RS16915	PF12799	Leucine Rich repeats (2 copies)
THII_RS16920	PF03653	THII_RS16920
THII_RS16925	PF00625	Guanylate kinase
THII_RS16930	PF03755	THII_RS16930
THII_RS16930	PF08340	THII_RS16930
THII_RS16935	PF00072	Response regulator receiver domain
THII_RS16935	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS16935	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS16935	PF13426	PAS domain
THII_RS16950	PF00989	PAS fold
THII_RS16950	PF08447	PAS fold
THII_RS16960	PF08447	PAS fold
THII_RS16960	PF13426	PAS domain
THII_RS16965	PF00009	Elongation factor Tu GTP binding domain
THII_RS16965	PF00679	Elongation factor G C-terminus
THII_RS16965	PF03144	Elongation factor Tu domain 2
THII_RS16970	PF13385	Concanavalin A-like lectin/glucanases superfamily
THII_RS16975	PF00005	ABC transporter
THII_RS16975	PF00498	FHA domain
THII_RS16980	PF01761	3-dehydroquinate synthase
THII_RS16985	PF01202	Shikimate kinase
THII_RS16990	PF07786	THII_RS16990
THII_RS17005	PF12850	Calcineurin-like phosphoesterase superfamily domain
THII_RS17010	PF00025	ADP-ribosylation factor family
THII_RS17015	PF00575	S1 RNA binding domain
THII_RS17015	PF10150	Ribonuclease E/G family
THII_RS17020	PF00849	RNA pseudouridylate synthase
THII_RS17020	PF01479	S4 domain
THII_RS17025	PF13419	Haloacid dehalogenase-like hydrolase
THII_RS17030	PF01343	Peptidase family S49
THII_RS17035	PF05036	Sporulation related domain
THII_RS17040	PF02537	THII_RS17040
THII_RS17045	PF02641	Uncharacterized ACR, COG1993
THII_RS17050	PF02537	THII_RS17050
THII_RS17055	PF02641	Uncharacterized ACR, COG1993
THII_RS17060	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
THII_RS17060	PF02403	Seryl-tRNA synthetase N-terminal domain
THII_RS17065	PF08238	Sel1 repeat
THII_RS17080	PF03235	THII_RS17080
THII_RS17085	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
THII_RS17085	PF07992	Pyridine nucleotide-disulphide oxidoreductase
THII_RS17090	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
THII_RS17090	PF00364	Biotin-requiring enzyme
THII_RS17090	PF02817	e3 binding domain
THII_RS17095	PF00676	Dehydrogenase E1 component
THII_RS17095	PF02779	Transketolase, pyrimidine binding domain
THII_RS17095	PF16078	THII_RS17095
THII_RS17095	PF16870	THII_RS17095
THII_RS17100	PF00056	lactate/malate dehydrogenase, NAD binding domain
THII_RS17100	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
THII_RS17110	PF00072	Response regulator receiver domain
THII_RS17110	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS17110	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS17115	PF00072	Response regulator receiver domain
THII_RS17115	PF00486	Transcriptional regulatory protein, C terminal
THII_RS17130	PF05685	Putative restriction endonuclease
THII_RS17135	PF14239	THII_RS17135
THII_RS17135	PF14279	THII_RS17135
THII_RS17140	PF05685	Putative restriction endonuclease
THII_RS17145	PF00842	Alanine racemase, C-terminal domain
THII_RS17145	PF01168	Alanine racemase, N-terminal domain
THII_RS17150	PF00772	DnaB-like helicase N terminal domain
THII_RS17150	PF03796	DnaB-like helicase C terminal domain
THII_RS17150	PF14528	LAGLIDADG-like domain
THII_RS17150	PF14890	Intein splicing domain
THII_RS17155	PF01281	Ribosomal protein L9, N-terminal domain
THII_RS17155	PF03948	Ribosomal protein L9, C-terminal domain
THII_RS17160	PF01084	Ribosomal protein S18
THII_RS17165	PF01250	Ribosomal protein S6
THII_RS17175	PF04079	Putative transcriptional regulators (Ypuh-like)
THII_RS17180	PF02616	ScpA/B protein
THII_RS17185	PF00579	tRNA synthetases class I (W and Y)
THII_RS17195	PF01300	Telomere recombination
THII_RS17200	PF02390	Putative methyltransferase
THII_RS17205	PF00072	Response regulator receiver domain
THII_RS17205	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS17205	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS17210	PF00069	Protein kinase domain
THII_RS17210	PF00072	Response regulator receiver domain
THII_RS17210	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS17210	PF01590	GAF domain
THII_RS17210	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS17210	PF13191	AAA ATPase domain
THII_RS17220	PF01523	Putative modulator of DNA gyrase
THII_RS17225	PF01523	Putative modulator of DNA gyrase
THII_RS17230	PF00186	Dihydrofolate reductase
THII_RS17235	PF01258	Prokaryotic dksA/traR C4-type zinc finger
THII_RS17240	PF01724	Domain of unknown function DUF29
THII_RS17245	PF09967	THII_RS17245
THII_RS17245	PF13203	THII_RS17245
THII_RS17250	PF05050	Methyltransferase FkbM domain
THII_RS17255	PF02412	Thrombospondin type 3 repeat
THII_RS17270	PF00155	Aminotransferase class I and II
THII_RS17275	PF13500	AAA domain
THII_RS17280	PF08645	Polynucleotide kinase 3 phosphatase
THII_RS17285	PF03781	Sulfatase-modifying factor enzyme 1
THII_RS17295	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
THII_RS17295	PF03129	Anticodon binding domain
THII_RS17295	PF04073	Aminoacyl-tRNA editing domain
THII_RS17300	PF00905	Penicillin binding protein transpeptidase domain
THII_RS17300	PF00912	Transglycosylase
THII_RS17315	PF00534	Glycosyl transferases group 1
THII_RS17315	PF08323	Starch synthase catalytic domain
THII_RS17325	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
THII_RS17335	PF00534	Glycosyl transferases group 1
THII_RS17335	PF08323	Starch synthase catalytic domain
THII_RS17340	PF00892	EamA-like transporter family
THII_RS17345	PF08713	DNA alkylation repair enzyme
THII_RS17355	PF05685	Putative restriction endonuclease
THII_RS17365	PF09957	THII_RS17365
THII_RS17370	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
THII_RS17370	PF00364	Biotin-requiring enzyme
THII_RS17370	PF02817	e3 binding domain
THII_RS17375	PF00456	Transketolase, thiamine diphosphate binding domain
THII_RS17385	PF04055	Radical SAM superfamily
THII_RS17385	PF13186	Iron-sulfur cluster-binding domain
THII_RS17390	PF05685	Putative restriction endonuclease
THII_RS17395	PF00400	WD domain, G-beta repeat
THII_RS17395	PF07676	WD40-like Beta Propeller Repeat
THII_RS17405	PF08263	Leucine rich repeat N-terminal domain
THII_RS17415	PF04359	Protein of unknown function (DUF493)
THII_RS17420	PF01063	Aminotransferase class IV
THII_RS17425	PF00768	D-alanyl-D-alanine carboxypeptidase
THII_RS17425	PF07943	Penicillin-binding protein 5, C-terminal domain
THII_RS17430	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
THII_RS17435	PF13406	Transglycosylase SLT domain
THII_RS17440	PF01098	THII_RS17440
THII_RS17445	PF00905	Penicillin binding protein transpeptidase domain
THII_RS17445	PF03717	Penicillin-binding Protein dimerisation domain
THII_RS17450	PF04093	THII_RS17450
THII_RS17455	PF04085	rod shape-determining protein MreC
THII_RS17460	PF06723	MreB/Mbl protein
THII_RS17465	PF02686	Glu-tRNAGln amidotransferase C subunit
THII_RS17470	PF01425	Amidase
THII_RS17475	PF02637	GatB domain
THII_RS17475	PF02934	GatB/GatE catalytic domain
THII_RS17480	PF00227	Proteasome subunit
THII_RS17495	PF05685	Putative restriction endonuclease
THII_RS17500	PF01724	Domain of unknown function DUF29
THII_RS17505	PF00692	dUTPase
THII_RS17510	PF01883	Domain of unknown function DUF59
THII_RS17510	PF10609	ParA/MinD ATPase like
THII_RS17515	PF00571	CBS domain
THII_RS17520	PF02384	N-6 DNA Methylase
THII_RS17525	PF00805	Pentapeptide repeats (8 copies)
THII_RS17530	PF01497	Periplasmic binding protein
THII_RS17535	PF04298	THII_RS17535
THII_RS17545	PF03547	THII_RS17545
THII_RS17555	PF04228	THII_RS17555
THII_RS17570	PF03031	NLI interacting factor-like phosphatase
THII_RS17575	PF00206	Lyase
THII_RS17575	PF08328	Adenylosuccinate lyase C-terminal
THII_RS17580	PF02401	LytB protein
THII_RS17585	PF01455	HupF/HypC family
THII_RS17590	PF01155	Hydrogenase expression/synthesis hypA family
THII_RS17595	PF15780	THII_RS17595
THII_RS17600	PF13180	PDZ domain
THII_RS17600	PF13365	Trypsin-like peptidase domain
THII_RS17605	PF00348	Polyprenyl synthetase
THII_RS17630	PF09012	FeoC like transcriptional regulator
THII_RS17635	PF02421	Ferrous iron transport protein B
THII_RS17635	PF07664	THII_RS17635
THII_RS17635	PF07670	Nucleoside recognition
THII_RS17640	PF04023	FeoA domain
THII_RS17645	PF04023	FeoA domain
THII_RS17670	PF12799	Leucine Rich repeats (2 copies)
THII_RS17680	PF00682	HMGL-like
THII_RS17680	PF08502	LeuA allosteric (dimerisation) domain
THII_RS17700	PF01061	THII_RS17700
THII_RS17705	PF00005	ABC transporter
THII_RS17710	PF13466	STAS domain
THII_RS17715	PF05494	Toluene tolerance, Ttg2
THII_RS17720	PF02470	THII_RS17720
THII_RS17725	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS17725	PF13191	AAA ATPase domain
THII_RS17730	PF00180	Isocitrate/isopropylmalate dehydrogenase
THII_RS17730	PF00571	CBS domain
THII_RS17740	PF01544	CorA-like Mg2+ transporter protein
THII_RS17745	PF13304	AAA domain
THII_RS17755	PF00733	Asparagine synthase
THII_RS17755	PF13537	Glutamine amidotransferase domain
THII_RS17765	PF01724	Domain of unknown function DUF29
THII_RS17770	PF01040	UbiA prenyltransferase family
THII_RS17775	PF00089	Trypsin
THII_RS17780	PF02618	YceG-like family
THII_RS17785	PF00109	Beta-ketoacyl synthase, N-terminal domain
THII_RS17785	PF02801	Beta-ketoacyl synthase, C-terminal domain
THII_RS17790	PF00550	Phosphopantetheine attachment site
THII_RS17795	PF13561	Enoyl-(Acyl carrier protein) reductase
THII_RS17800	PF00698	Acyl transferase domain
THII_RS17805	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
THII_RS17805	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
THII_RS17810	PF02504	Fatty acid synthesis protein
THII_RS17815	PF01783	Ribosomal L32p protein family
THII_RS17820	PF02620	THII_RS17820
THII_RS17825	PF02545	Maf-like protein
THII_RS17830	PF01750	Hydrogenase maturation protease
THII_RS17845	PF00122	E1-E2 ATPase
THII_RS17845	PF00403	Heavy-metal-associated domain
THII_RS17845	PF00702	haloacid dehalogenase-like hydrolase
THII_RS17845	PF12156	THII_RS17845
THII_RS17850	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
THII_RS17850	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
THII_RS17855	PF00580	UvrD/REP helicase N-terminal domain
THII_RS17855	PF13361	UvrD-like helicase C-terminal domain
THII_RS17860	PF13520	Amino acid permease
THII_RS17865	PF04255	Protein of unknown function (DUF433)
THII_RS17890	PF14281	THII_RS17890
THII_RS17895	PF14281	THII_RS17895
THII_RS17910	PF05685	Putative restriction endonuclease
THII_RS17915	PF00809	Pterin binding enzyme
THII_RS17925	PF00004	ATPase family associated with various cellular activities (AAA)
THII_RS17925	PF01434	Peptidase family M41
THII_RS17925	PF06480	FtsH Extracellular
THII_RS17930	PF01728	FtsJ-like methyltransferase
THII_RS17940	PF01909	Nucleotidyltransferase domain
THII_RS17940	PF01966	HD domain
THII_RS17940	PF08335	GlnD PII-uridylyltransferase
THII_RS17950	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
THII_RS17955	PF08240	Alcohol dehydrogenase GroES-like domain
THII_RS17970	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS17970	PF05226	THII_RS17970
THII_RS17975	PF00218	Indole-3-glycerol phosphate synthase
THII_RS17980	PF00591	Glycosyl transferase family, a/b domain
THII_RS17980	PF02885	Glycosyl transferase family, helical bundle domain
THII_RS17985	PF02080	TrkA-C domain
THII_RS17985	PF03600	Citrate transporter
THII_RS17995	PF01138	3' exoribonuclease family, domain 1
THII_RS17995	PF03725	3' exoribonuclease family, domain 2
THII_RS18000	PF00226	DnaJ domain
THII_RS18000	PF03703	THII_RS18000
THII_RS18005	PF00113	Enolase, C-terminal TIM barrel domain
THII_RS18005	PF03952	Enolase, N-terminal domain
THII_RS18010	PF00793	DAHP synthetase I family
THII_RS18015	PF01882	THII_RS18015
THII_RS18020	PF01965	DJ-1/PfpI family
THII_RS18025	PF01380	SIS domain
THII_RS18025	PF13522	Glutamine amidotransferase domain
THII_RS18045	PF09994	Uncharacterized alpha/beta hydrolase domain (DUF2235)
THII_RS18050	PF04349	Periplasmic glucan biosynthesis protein, MdoG
THII_RS18060	PF13632	Glycosyl transferase family group 2
THII_RS18065	PF04389	Peptidase family M28
THII_RS18070	PF07788	THII_RS18070
THII_RS18070	PF12644	THII_RS18070
THII_RS18110	PF00112	Papain family cysteine protease
THII_RS18110	PF14326	THII_RS18110
THII_RS18120	PF09972	THII_RS18120
THII_RS18125	PF04055	Radical SAM superfamily
THII_RS18125	PF13186	Iron-sulfur cluster-binding domain
THII_RS18125	PF13394	4Fe-4S single cluster domain
THII_RS18130	PF00999	Sodium/hydrogen exchanger family
THII_RS18135	PF00582	Universal stress protein family
THII_RS18145	PF01435	Peptidase family M48
THII_RS18145	PF16491	THII_RS18145
THII_RS18150	PF00929	Exonuclease
THII_RS18155	PF01256	Carbohydrate kinase
THII_RS18155	PF03853	YjeF-related protein N-terminus
THII_RS18160	PF02367	Uncharacterised P-loop hydrolase UPF0079
THII_RS18165	PF01370	NAD dependent epimerase/dehydratase family
THII_RS18175	PF00578	AhpC/TSA family
THII_RS18195	PF12850	Calcineurin-like phosphoesterase superfamily domain
THII_RS18205	PF13586	THII_RS18205
THII_RS18215	PF05099	Tellurite resistance protein TerB
THII_RS18225	PF01924	Hydrogenase formation hypA family
THII_RS18240	PF12796	Ankyrin repeats (3 copies)
THII_RS18250	PF12770	THII_RS18250
THII_RS18280	PF01724	Domain of unknown function DUF29
THII_RS18295	PF13649	Methyltransferase domain
THII_RS18300	PF00037	4Fe-4S binding domain
THII_RS18300	PF07992	Pyridine nucleotide-disulphide oxidoreductase
THII_RS18300	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
THII_RS18310	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
THII_RS18315	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
THII_RS18315	PF17147	THII_RS18315
THII_RS18320	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
THII_RS18335	PF13302	Acetyltransferase (GNAT) domain
THII_RS18345	PF00425	chorismate binding enzyme
THII_RS18345	PF04715	Anthranilate synthase component I, N terminal region
THII_RS18350	PF13419	Haloacid dehalogenase-like hydrolase
THII_RS18355	PF00834	Ribulose-phosphate 3 epimerase family
THII_RS18370	PF05257	CHAP domain
THII_RS18375	PF00076	RNA recognition motif
THII_RS18380	PF00733	Asparagine synthase
THII_RS18385	PF04055	Radical SAM superfamily
THII_RS18395	PF07027	THII_RS18395
THII_RS18400	PF10108	Predicted 3'-5' exonuclease related to the exonuclease domain of PolB
THII_RS18405	PF02541	Ppx/GppA phosphatase family
THII_RS18410	PF13609	Gram-negative porin
THII_RS18415	PF00762	Ferrochelatase
THII_RS18420	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
THII_RS18420	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
THII_RS18430	PF02543	Carbamoyltransferase
THII_RS18430	PF16861	THII_RS18430
THII_RS18440	PF00072	Response regulator receiver domain
THII_RS18440	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS18440	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS18450	PF01180	Dihydroorotate dehydrogenase
THII_RS18455	PF00575	S1 RNA binding domain
THII_RS18455	PF09371	Tex-like protein N-terminal domain
THII_RS18455	PF12836	Helix-hairpin-helix motif
THII_RS18455	PF16921	THII_RS18455
THII_RS18460	PF01555	DNA methylase
THII_RS18465	PF05673	Protein of unknown function (DUF815)
THII_RS18470	PF00310	Glutamine amidotransferases class-II
THII_RS18470	PF01493	GXGXG motif
THII_RS18470	PF01645	Conserved region in glutamate synthase
THII_RS18470	PF04898	Glutamate synthase central domain
THII_RS18475	PF15919	THII_RS18475
THII_RS18480	PF07927	YcfA-like protein
THII_RS18490	PF09601	THII_RS18490
THII_RS18495	PF01381	Helix-turn-helix
THII_RS18500	PF00072	Response regulator receiver domain
THII_RS18500	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS18500	PF00672	HAMP domain
THII_RS18500	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS18500	PF13185	GAF domain
THII_RS18510	PF00300	Histidine phosphatase superfamily (branch 1)
THII_RS18515	PF00117	Glutamine amidotransferase class-I
THII_RS18515	PF00958	GMP synthase C terminal domain
THII_RS18515	PF02540	NAD synthase
THII_RS18520	PF00639	PPIC-type PPIASE domain
THII_RS18525	PF00174	Oxidoreductase molybdopterin binding domain
THII_RS18530	PF01794	THII_RS18530
THII_RS18540	PF01648	4'-phosphopantetheinyl transferase superfamily
THII_RS18550	PF02602	Uroporphyrinogen-III synthase HemD
THII_RS18560	PF00561	alpha/beta hydrolase fold
THII_RS18610	PF01710	Transposase
THII_RS18615	PF01710	Transposase
THII_RS18615	PF13358	DDE superfamily endonuclease
THII_RS18625	PF01381	Helix-turn-helix
THII_RS18640	PF00271	Helicase conserved C-terminal domain
THII_RS18640	PF02151	UvrB/uvrC motif
THII_RS18640	PF04851	Type III restriction enzyme, res subunit
THII_RS18640	PF12344	Ultra-violet resistance protein B
THII_RS18645	PF00155	Aminotransferase class I and II
THII_RS18660	PF01134	Glucose inhibited division protein A
THII_RS18660	PF13932	GidA associated domain 3
THII_RS18665	PF01564	Spermine/spermidine synthase
THII_RS18670	PF03167	Uracil DNA glycosylase superfamily
THII_RS18685	PF01734	Patatin-like phospholipase
THII_RS18695	PF04255	Protein of unknown function (DUF433)
THII_RS18700	PF01546	Peptidase family M20/M25/M40
THII_RS18700	PF07687	Peptidase dimerisation domain
THII_RS18710	PF00194	Eukaryotic-type carbonic anhydrase
THII_RS18715	PF11159	THII_RS18715
THII_RS18720	PF12643	THII_RS18720
THII_RS18735	PF00300	Histidine phosphatase superfamily (branch 1)
THII_RS18740	PF01551	Peptidase family M23
THII_RS18745	PF03572	Peptidase family S41
THII_RS18745	PF13180	PDZ domain
THII_RS18750	PF01965	DJ-1/PfpI family
THII_RS18755	PF00285	Citrate synthase
THII_RS18760	PF10605	THII_RS18760
THII_RS18770	PF13181	Tetratricopeptide repeat
THII_RS18775	PF12680	SnoaL-like domain
THII_RS18780	PF07719	Tetratricopeptide repeat
THII_RS18780	PF13432	Tetratricopeptide repeat
THII_RS18785	PF13424	Tetratricopeptide repeat
THII_RS18790	PF00069	Protein kinase domain
THII_RS18790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS18790	PF13185	GAF domain
THII_RS18790	PF13191	AAA ATPase domain
THII_RS18800	PF00072	Response regulator receiver domain
THII_RS18800	PF00990	GGDEF domain
THII_RS18810	PF13682	Chemoreceptor zinc-binding domain
THII_RS18815	PF08870	Domain of unknown function (DUF1832)
THII_RS18820	PF02915	Rubrerythrin
THII_RS18825	PF01494	FAD binding domain
THII_RS18830	PF00766	Electron transfer flavoprotein FAD-binding domain
THII_RS18830	PF01012	Electron transfer flavoprotein domain
THII_RS18835	PF01012	Electron transfer flavoprotein domain
THII_RS18840	PF13555	P-loop containing region of AAA domain
THII_RS18845	PF04480	Protein of unknown function (DUF559)
THII_RS18850	PF01507	Phosphoadenosine phosphosulfate reductase family
THII_RS18855	PF01850	PIN domain
THII_RS18865	PF00999	Sodium/hydrogen exchanger family
THII_RS18870	PF01329	Pterin 4 alpha carbinolamine dehydratase
THII_RS18880	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
THII_RS18880	PF07685	CobB/CobQ-like glutamine amidotransferase domain
THII_RS18885	PF00691	OmpA family
THII_RS18895	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
THII_RS18900	PF12784	THII_RS18900
THII_RS18905	PF00027	Cyclic nucleotide-binding domain
THII_RS18905	PF00571	CBS domain
THII_RS18905	PF03445	THII_RS18905
THII_RS18905	PF10335	THII_RS18905
THII_RS18910	PF00929	Exonuclease
THII_RS18915	PF00474	Sodium:solute symporter family
THII_RS18920	PF04341	THII_RS18920
THII_RS18930	PF16363	THII_RS18930
THII_RS18940	PF00717	Peptidase S24-like
THII_RS18945	PF01118	Semialdehyde dehydrogenase, NAD binding domain
THII_RS18945	PF02774	Semialdehyde dehydrogenase, dimerisation domain
THII_RS18955	PF04519	THII_RS18955
THII_RS18960	PF00672	HAMP domain
THII_RS18960	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS18960	PF02743	Cache domain
THII_RS18965	PF04186	THII_RS18965
THII_RS18970	PF03091	CutA1 divalent ion tolerance protein
THII_RS18975	PF02683	THII_RS18975
THII_RS18975	PF11412	Disulphide bond corrector protein DsbC
THII_RS18975	PF13899	Thioredoxin-like
THII_RS18980	PF00578	AhpC/TSA family
THII_RS19000	PF00072	Response regulator receiver domain
THII_RS19000	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS19000	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS19010	PF00072	Response regulator receiver domain
THII_RS19010	PF00497	Bacterial extracellular solute-binding proteins, family 3
THII_RS19010	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS19010	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS19015	PF00210	Ferritin-like domain
THII_RS19020	PF01842	ACT domain
THII_RS19020	PF13740	ACT domain
THII_RS19025	PF01327	Polypeptide deformylase
THII_RS19030	PF12784	THII_RS19030
THII_RS19035	PF10049	THII_RS19035
THII_RS19040	PF10387	Protein of unknown function (DUF2442)
THII_RS19045	PF13711	THII_RS19045
THII_RS19050	PF00114	Pilin (bacterial filament)
THII_RS19050	PF13633	Prokaryotic N-terminal methylation site
THII_RS19075	PF00487	THII_RS19075
THII_RS19075	PF01610	THII_RS19075
THII_RS19080	PF13633	Prokaryotic N-terminal methylation site
THII_RS19090	PF00380	Ribosomal protein S9/S16
THII_RS19095	PF00572	Ribosomal protein L13
THII_RS19100	PF03372	Endonuclease/Exonuclease/phosphatase family
THII_RS19105	PF07788	THII_RS19105
THII_RS19105	PF12644	THII_RS19105
THII_RS19115	PF01381	Helix-turn-helix
THII_RS19125	PF00072	Response regulator receiver domain
THII_RS19125	PF00990	GGDEF domain
THII_RS19135	PF13085	2Fe-2S iron-sulfur cluster binding domain
THII_RS19135	PF13183	4Fe-4S dicluster domain
THII_RS19140	PF01464	Transglycosylase SLT domain
THII_RS19145	PF13489	Methyltransferase domain
THII_RS19145	PF13527	Acetyltransferase (GNAT) domain
THII_RS19150	PF12832	MFS_1 like family
THII_RS19155	PF01264	Chorismate synthase
THII_RS19170	PF01243	Pyridoxamine 5'-phosphate oxidase
THII_RS19175	PF00633	Helix-hairpin-helix motif
THII_RS19175	PF00730	HhH-GPD superfamily base excision DNA repair protein
THII_RS19175	PF14815	NUDIX domain
THII_RS19180	PF04362	Bacterial Fe(2+) trafficking
THII_RS19190	PF02261	Aspartate decarboxylase
THII_RS19195	PF00575	S1 RNA binding domain
THII_RS19195	PF10150	Ribonuclease E/G family
THII_RS19200	PF13116	THII_RS19200
THII_RS19200	PF13502	THII_RS19200
THII_RS19205	PF00072	Response regulator receiver domain
THII_RS19205	PF00158	Sigma-54 interaction domain
THII_RS19205	PF02954	Bacterial regulatory protein, Fis family
THII_RS19210	PF01921	tRNA synthetases class I (K)
THII_RS19240	PF00886	Ribosomal protein S16
THII_RS19245	PF01782	RimM N-terminal domain
THII_RS19245	PF05239	PRC-barrel domain
THII_RS19250	PF01746	tRNA (Guanine-1)-methyltransferase
THII_RS19255	PF01245	Ribosomal protein L19
THII_RS19265	PF05685	Putative restriction endonuclease
THII_RS19270	PF13588	Type I restriction enzyme R protein N terminus (HSDR_N)
THII_RS19280	PF13470	THII_RS19280
THII_RS19290	PF00563	EAL domain
THII_RS19290	PF00990	GGDEF domain
THII_RS19290	PF08448	PAS fold
THII_RS19290	PF13426	PAS domain
THII_RS19300	PF01145	SPFH domain / Band 7 family
THII_RS19305	PF02810	SEC-C motif
THII_RS19315	PF04612	Type II secretion system (T2SS), protein M
THII_RS19320	PF00583	Acetyltransferase (GNAT) family
THII_RS19325	PF03167	Uracil DNA glycosylase superfamily
THII_RS19330	PF00682	HMGL-like
THII_RS19330	PF08502	LeuA allosteric (dimerisation) domain
THII_RS19335	PF02566	OsmC-like protein
THII_RS19345	PF02675	S-adenosylmethionine decarboxylase
THII_RS19350	PF12706	Beta-lactamase superfamily domain
THII_RS19355	PF00753	Metallo-beta-lactamase superfamily
THII_RS19360	PF00072	Response regulator receiver domain
THII_RS19370	PF03309	Type III pantothenate kinase
THII_RS19375	PF03099	Biotin/lipoate A/B protein ligase family
THII_RS19380	PF01467	Cytidylyltransferase
THII_RS19385	PF02410	Oligomerisation domain
THII_RS19395	PF13540	Regulator of chromosome condensation (RCC1) repeat
THII_RS19400	PF00005	ABC transporter
THII_RS19400	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
THII_RS19410	PF03279	THII_RS19410
THII_RS19425	PF01773	Na+ dependent nucleoside transporter N-terminus
THII_RS19425	PF07662	Na+ dependent nucleoside transporter C-terminus
THII_RS19425	PF07670	Nucleoside recognition
THII_RS19430	PF00535	Glycosyl transferase family 2
THII_RS19440	PF13809	THII_RS19440
THII_RS19450	PF04255	Protein of unknown function (DUF433)
THII_RS19455	PF01370	NAD dependent epimerase/dehydratase family
THII_RS19455	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
THII_RS19460	PF00535	Glycosyl transferase family 2
THII_RS19465	PF02566	OsmC-like protein
THII_RS19470	PF13598	THII_RS19470
THII_RS19480	PF02660	THII_RS19480
THII_RS19485	PF00905	Penicillin binding protein transpeptidase domain
THII_RS19485	PF00912	Transglycosylase
THII_RS19485	PF17092	THII_RS19485
THII_RS19490	PF11104	Type IV pilus assembly protein PilM;
THII_RS19495	PF05137	THII_RS19495
THII_RS19500	PF04350	Pilus assembly protein, PilO
THII_RS19505	PF04351	Pilus assembly protein, PilP
THII_RS19510	PF04351	Pilus assembly protein, PilP
THII_RS19515	PF00263	THII_RS19515
THII_RS19515	PF03958	Bacterial type II/III secretion system short domain
THII_RS19515	PF11741	AMIN domain
THII_RS19520	PF02369	Bacterial Ig-like domain (group 1)
THII_RS19520	PF09134	Invasin, domain 3
THII_RS19530	PF15738	THII_RS19530
THII_RS19535	PF00586	AIR synthase related protein, N-terminal domain
THII_RS19535	PF02769	AIR synthase related protein, C-terminal domain
THII_RS19540	PF00551	Formyl transferase
THII_RS19550	PF13414	TPR repeat
THII_RS19550	PF13432	Tetratricopeptide repeat
THII_RS19550	PF13844	Glycosyl transferase family 41
THII_RS19555	PF00764	Arginosuccinate synthase
THII_RS19560	PF13682	Chemoreceptor zinc-binding domain
THII_RS19565	PF05685	Putative restriction endonuclease
THII_RS19570	PF00873	AcrB/AcrD/AcrF family
THII_RS19575	PF16576	THII_RS19575
THII_RS19585	PF01510	N-acetylmuramoyl-L-alanine amidase
THII_RS19600	PF04012	THII_RS19600
THII_RS19620	PF04654	THII_RS19620
THII_RS19655	PF00535	Glycosyl transferase family 2
THII_RS19660	PF01627	Hpt domain
THII_RS19665	PF00072	Response regulator receiver domain
THII_RS19665	PF00990	GGDEF domain
THII_RS19665	PF08448	PAS fold
THII_RS19675	PF04314	Protein of unknown function (DUF461)
THII_RS19690	PF00239	Resolvase, N terminal domain
THII_RS19695	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
THII_RS19695	PF05547	THII_RS19695
THII_RS19705	PF00535	Glycosyl transferase family 2
THII_RS19715	PF01047	MarR family
THII_RS19740	PF14015	THII_RS19740
THII_RS19745	PF01551	Peptidase family M23
THII_RS19750	PF00069	Protein kinase domain
THII_RS19755	PF00072	Response regulator receiver domain
THII_RS19755	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS19755	PF01627	Hpt domain
THII_RS19755	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS19755	PF08447	PAS fold
THII_RS19755	PF13426	PAS domain
THII_RS19765	PF00082	Subtilase family
THII_RS19775	PF03160	Calx-beta domain
THII_RS19780	PF01936	NYN domain
THII_RS19785	PF00072	Response regulator receiver domain
THII_RS19785	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS19785	PF00672	HAMP domain
THII_RS19785	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS19785	PF02743	Cache domain
THII_RS19785	PF08447	PAS fold
THII_RS19785	PF08448	PAS fold
THII_RS19785	PF13426	PAS domain
THII_RS19790	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS19790	PF00672	HAMP domain
THII_RS19790	PF02743	Cache domain
THII_RS19795	PF00656	Caspase domain
THII_RS19795	PF08239	Bacterial SH3 domain
THII_RS19795	PF13308	YARHG domain
THII_RS19805	PF02630	SCO1/SenC
THII_RS19825	PF02470	THII_RS19825
THII_RS19830	PF00072	Response regulator receiver domain
THII_RS19830	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS19830	PF00989	PAS fold
THII_RS19830	PF01590	GAF domain
THII_RS19830	PF01627	Hpt domain
THII_RS19830	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS19830	PF08447	PAS fold
THII_RS19830	PF13426	PAS domain
THII_RS19835	PF04354	ZipA, C-terminal FtsZ-binding domain
THII_RS19840	PF09949	THII_RS19840
THII_RS19845	PF02493	MORN repeat
THII_RS19850	PF03306	Alpha-acetolactate decarboxylase
THII_RS19855	PF03306	Alpha-acetolactate decarboxylase
THII_RS19860	PF00535	Glycosyl transferase family 2
THII_RS19860	PF13469	Sulfotransferase family
THII_RS19865	PF12386	THII_RS19865
THII_RS19870	PF00313	'Cold-shock' DNA-binding domain
THII_RS19875	PF00072	Response regulator receiver domain
THII_RS19875	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS19875	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS19875	PF08447	PAS fold
THII_RS19875	PF08448	PAS fold
THII_RS19875	PF13185	GAF domain
THII_RS19875	PF13426	PAS domain
THII_RS19880	PF00563	EAL domain
THII_RS19880	PF00989	PAS fold
THII_RS19880	PF00990	GGDEF domain
THII_RS19880	PF03924	CHASE domain
THII_RS19880	PF13426	PAS domain
THII_RS19885	PF05685	Putative restriction endonuclease
THII_RS19890	PF01850	PIN domain
THII_RS19900	PF00560	Leucine Rich Repeat
THII_RS19900	PF13855	Leucine rich repeat
THII_RS19905	PF00574	Clp protease
THII_RS19910	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
THII_RS19915	PF00072	Response regulator receiver domain
THII_RS19915	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS19915	PF00672	HAMP domain
THII_RS19915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS19920	PF00560	Leucine Rich Repeat
THII_RS19920	PF13855	Leucine rich repeat
THII_RS19925	PF01464	Transglycosylase SLT domain
THII_RS19925	PF01476	LysM domain
THII_RS19930	PF00672	HAMP domain
THII_RS19930	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS19930	PF05228	THII_RS19930
THII_RS19930	PF07730	Histidine kinase
THII_RS19930	PF08447	PAS fold
THII_RS19935	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS19935	PF12729	THII_RS19935
THII_RS19940	PF02493	MORN repeat
THII_RS19945	PF12770	THII_RS19945
THII_RS19945	PF13424	Tetratricopeptide repeat
THII_RS19965	PF06812	THII_RS19965
THII_RS19970	PF09850	Uncharacterized protein conserved in bacteria (DUF2077)
THII_RS19975	PF04965	Gene 25-like lysozyme
THII_RS19980	PF13431	Tetratricopeptide repeat
THII_RS19980	PF13432	Tetratricopeptide repeat
THII_RS19985	PF00072	Response regulator receiver domain
THII_RS19985	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS19985	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS19985	PF03924	CHASE domain
THII_RS19985	PF08448	PAS fold
THII_RS19985	PF13426	PAS domain
THII_RS19990	PF00072	Response regulator receiver domain
THII_RS19990	PF00990	GGDEF domain
THII_RS19990	PF08448	PAS fold
THII_RS19990	PF13426	PAS domain
THII_RS19995	PF00072	Response regulator receiver domain
THII_RS19995	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS19995	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS19995	PF08447	PAS fold
THII_RS19995	PF08448	PAS fold
THII_RS19995	PF13426	PAS domain
THII_RS20005	PF08238	Sel1 repeat
THII_RS20010	PF00400	WD domain, G-beta repeat
THII_RS20015	PF08241	Methyltransferase domain
THII_RS20020	PF05685	Putative restriction endonuclease
THII_RS20030	PF13672	Protein phosphatase 2C
THII_RS20040	PF00072	Response regulator receiver domain
THII_RS20040	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20040	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20045	PF00072	Response regulator receiver domain
THII_RS20045	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20045	PF00672	HAMP domain
THII_RS20045	PF00989	PAS fold
THII_RS20045	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20045	PF02743	Cache domain
THII_RS20045	PF13426	PAS domain
THII_RS20050	PF01292	Prokaryotic cytochrome b561
THII_RS20050	PF09626	Dihaem cytochrome c
THII_RS20055	PF00072	Response regulator receiver domain
THII_RS20055	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20055	PF00672	HAMP domain
THII_RS20055	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20060	PF13343	Bacterial extracellular solute-binding protein
THII_RS20065	PF00593	TonB dependent receptor
THII_RS20075	PF01476	LysM domain
THII_RS20080	PF03781	Sulfatase-modifying factor enzyme 1
THII_RS20085	PF13442	Cytochrome C oxidase, cbb3-type, subunit III
THII_RS20095	PF01584	CheW-like domain
THII_RS20100	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20100	PF00672	HAMP domain
THII_RS20100	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20100	PF02743	Cache domain
THII_RS20105	PF01464	Transglycosylase SLT domain
THII_RS20105	PF14718	Soluble lytic murein transglycosylase L domain
THII_RS20110	PF16576	THII_RS20110
THII_RS20115	PF00563	EAL domain
THII_RS20115	PF00990	GGDEF domain
THII_RS20115	PF08447	PAS fold
THII_RS20115	PF08448	PAS fold
THII_RS20115	PF17159	THII_RS20115
THII_RS20120	PF00072	Response regulator receiver domain
THII_RS20120	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20120	PF00989	PAS fold
THII_RS20120	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20120	PF08447	PAS fold
THII_RS20120	PF08448	PAS fold
THII_RS20125	PF01764	Lipase (class 3)
THII_RS20130	PF13641	Glycosyltransferase like family 2
THII_RS20135	PF00072	Response regulator receiver domain
THII_RS20135	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20135	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20140	PF13103	TonB C terminal
THII_RS20150	PF00072	Response regulator receiver domain
THII_RS20150	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20150	PF00989	PAS fold
THII_RS20150	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20150	PF08447	PAS fold
THII_RS20150	PF08448	PAS fold
THII_RS20150	PF13426	PAS domain
THII_RS20155	PF00574	Clp protease
THII_RS20160	PF00353	Hemolysin-type calcium-binding repeat (2 copies)
THII_RS20165	PF00400	WD domain, G-beta repeat
THII_RS20165	PF13676	TIR domain
THII_RS20170	PF06271	THII_RS20170
THII_RS20175	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS20180	PF02613	Nitrate reductase delta subunit
THII_RS20185	PF12836	Helix-hairpin-helix motif
THII_RS20190	PF01436	NHL repeat
THII_RS20190	PF03160	Calx-beta domain
THII_RS20195	PF00672	HAMP domain
THII_RS20195	PF00990	GGDEF domain
THII_RS20195	PF02743	Cache domain
THII_RS20195	PF08448	PAS fold
THII_RS20200	PF01400	Astacin (Peptidase family M12A)
THII_RS20205	PF07691	PA14 domain
THII_RS20210	PF14252	THII_RS20210
THII_RS20220	PF04246	THII_RS20220
THII_RS20225	PF00082	Subtilase family
THII_RS20230	PF04352	ProQ/FINO family
THII_RS20235	PF00072	Response regulator receiver domain
THII_RS20235	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20235	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20245	PF00149	Calcineurin-like phosphoesterase
THII_RS20250	PF13432	Tetratricopeptide repeat
THII_RS20255	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS20260	PF00534	Glycosyl transferases group 1
THII_RS20260	PF13641	Glycosyltransferase like family 2
THII_RS20265	PF01968	Hydantoinase/oxoprolinase
THII_RS20265	PF02538	THII_RS20265
THII_RS20265	PF05378	THII_RS20265
THII_RS20270	PF00072	Response regulator receiver domain
THII_RS20270	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20270	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20270	PF13185	GAF domain
THII_RS20280	PF00072	Response regulator receiver domain
THII_RS20280	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20280	PF00672	HAMP domain
THII_RS20280	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20280	PF13185	GAF domain
THII_RS20280	PF16591	THII_RS20280
THII_RS20285	PF00072	Response regulator receiver domain
THII_RS20290	PF01584	CheW-like domain
THII_RS20295	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS20295	PF00672	HAMP domain
THII_RS20300	PF13699	THII_RS20300
THII_RS20305	PF04984	Phage tail sheath protein
THII_RS20310	PF01381	Helix-turn-helix
THII_RS20335	PF03544	Gram-negative bacterial TonB protein C-terminal
THII_RS20340	PF01809	THII_RS20340
THII_RS20345	PF00400	WD domain, G-beta repeat
THII_RS20355	PF00072	Response regulator receiver domain
THII_RS20355	PF00211	Adenylate and Guanylate cyclase catalytic domain
THII_RS20355	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20355	PF01627	Hpt domain
THII_RS20355	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20355	PF17152	THII_RS20355
THII_RS20360	PF09115	DNA polymerase III, delta subunit, C terminal
THII_RS20360	PF13177	DNA polymerase III, delta subunit
THII_RS20370	PF13546	THII_RS20370
THII_RS20375	PF12710	haloacid dehalogenase-like hydrolase
THII_RS20380	PF01609	Transposase DDE domain
THII_RS20390	PF00072	Response regulator receiver domain
THII_RS20390	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20390	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20390	PF13426	PAS domain
THII_RS20400	PF13665	THII_RS20400
THII_RS20400	PF15635	THII_RS20400
THII_RS20405	PF00226	DnaJ domain
THII_RS20405	PF03703	THII_RS20405
THII_RS20415	PF00072	Response regulator receiver domain
THII_RS20415	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20415	PF00989	PAS fold
THII_RS20415	PF01627	Hpt domain
THII_RS20415	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20415	PF13426	PAS domain
THII_RS20420	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS20420	PF00672	HAMP domain
THII_RS20420	PF08376	Nitrate and nitrite sensing
THII_RS20425	PF13544	THII_RS20425
THII_RS20430	PF02397	THII_RS20430
THII_RS20435	PF02397	THII_RS20435
THII_RS20440	PF00092	von Willebrand factor type A domain
THII_RS20445	PF13469	Sulfotransferase family
THII_RS20450	PF08263	Leucine rich repeat N-terminal domain
THII_RS20450	PF13855	Leucine rich repeat
THII_RS20455	PF00072	Response regulator receiver domain
THII_RS20455	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20455	PF00989	PAS fold
THII_RS20455	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20455	PF08447	PAS fold
THII_RS20455	PF08448	PAS fold
THII_RS20455	PF13185	GAF domain
THII_RS20460	PF01551	Peptidase family M23
THII_RS20465	PF00188	Cysteine-rich secretory protein family
THII_RS20485	PF12836	Helix-hairpin-helix motif
THII_RS20490	PF00801	PKD domain
THII_RS20490	PF13229	Right handed beta helix region
THII_RS20495	PF02225	PA domain
THII_RS20495	PF04389	Peptidase family M28
THII_RS20500	PF13181	Tetratricopeptide repeat
THII_RS20500	PF13414	TPR repeat
THII_RS20500	PF13431	Tetratricopeptide repeat
THII_RS20500	PF13432	Tetratricopeptide repeat
THII_RS20500	PF13844	Glycosyl transferase family 41
THII_RS20510	PF04055	Radical SAM superfamily
THII_RS20510	PF13353	4Fe-4S single cluster domain
THII_RS20520	PF05175	Methyltransferase small domain
THII_RS20525	PF05175	Methyltransferase small domain
THII_RS20530	PF10709	THII_RS20530
THII_RS20535	PF04542	Sigma-70 region 2
THII_RS20560	PF00989	PAS fold
THII_RS20560	PF08447	PAS fold
THII_RS20560	PF08448	PAS fold
THII_RS20560	PF13188	PAS domain
THII_RS20560	PF13426	PAS domain
THII_RS20565	PF00563	EAL domain
THII_RS20565	PF00989	PAS fold
THII_RS20565	PF00990	GGDEF domain
THII_RS20565	PF05231	THII_RS20565
THII_RS20570	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20570	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20570	PF02743	Cache domain
THII_RS20575	PF00989	PAS fold
THII_RS20575	PF00990	GGDEF domain
THII_RS20575	PF08447	PAS fold
THII_RS20575	PF08448	PAS fold
THII_RS20575	PF13426	PAS domain
THII_RS20585	PF00071	Ras family
THII_RS20585	PF00400	WD domain, G-beta repeat
THII_RS20585	PF13676	TIR domain
THII_RS20590	PF00989	PAS fold
THII_RS20590	PF00990	GGDEF domain
THII_RS20595	PF00072	Response regulator receiver domain
THII_RS20595	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20595	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20595	PF11849	THII_RS20595
THII_RS20600	PF02412	Thrombospondin type 3 repeat
THII_RS20625	PF12371	THII_RS20625
THII_RS20630	PF01551	Peptidase family M23
THII_RS20635	PF13358	DDE superfamily endonuclease
THII_RS20640	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS20640	PF00672	HAMP domain
THII_RS20640	PF08376	Nitrate and nitrite sensing
THII_RS20645	PF00560	Leucine Rich Repeat
THII_RS20645	PF13855	Leucine rich repeat
THII_RS20650	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS20650	PF13426	PAS domain
THII_RS20655	PF00560	Leucine Rich Repeat
THII_RS20655	PF08263	Leucine rich repeat N-terminal domain
THII_RS20660	PF00069	Protein kinase domain
THII_RS20670	PF14341	THII_RS20670
THII_RS20675	PF13676	TIR domain
THII_RS20680	PF13665	THII_RS20680
THII_RS20685	PF01841	Transglutaminase-like superfamily
THII_RS20690	PF00089	Trypsin
THII_RS20705	PF00112	Papain family cysteine protease
THII_RS20710	PF01436	NHL repeat
THII_RS20715	PF12833	Helix-turn-helix domain
THII_RS20720	PF12019	Type II transport protein GspH
THII_RS20720	PF13544	THII_RS20720
THII_RS20725	PF09084	NMT1/THI5 like
THII_RS20730	PF00072	Response regulator receiver domain
THII_RS20730	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20735	PF00072	Response regulator receiver domain
THII_RS20735	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20735	PF00672	HAMP domain
THII_RS20735	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20735	PF08447	PAS fold
THII_RS20735	PF13426	PAS domain
THII_RS20740	PF00072	Response regulator receiver domain
THII_RS20740	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20740	PF00989	PAS fold
THII_RS20740	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20740	PF08447	PAS fold
THII_RS20740	PF12729	THII_RS20740
THII_RS20740	PF13188	PAS domain
THII_RS20740	PF13426	PAS domain
THII_RS20745	PF04187	Protein of unknown function, DUF399
THII_RS20745	PF13180	PDZ domain
THII_RS20750	PF14870	Photosynthesis system II assembly factor YCF48
THII_RS20760	PF00782	Dual specificity phosphatase, catalytic domain
THII_RS20770	PF05954	Phage late control gene D protein (GPD)
THII_RS20775	PF11563	Protoglobin
THII_RS20780	PF00072	Response regulator receiver domain
THII_RS20780	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20780	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20780	PF08447	PAS fold
THII_RS20780	PF17149	THII_RS20780
THII_RS20785	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS20785	PF00672	HAMP domain
THII_RS20785	PF02743	Cache domain
THII_RS20790	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20790	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20790	PF05228	THII_RS20790
THII_RS20795	PF00656	Caspase domain
THII_RS20805	PF01464	Transglycosylase SLT domain
THII_RS20820	PF01594	THII_RS20820
THII_RS20825	PF00072	Response regulator receiver domain
THII_RS20825	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20825	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20825	PF07228	Stage II sporulation protein E (SpoIIE)
THII_RS20825	PF07494	Two component regulator propeller
THII_RS20825	PF07495	Y_Y_Y domain
THII_RS20845	PF14870	Photosynthesis system II assembly factor YCF48
THII_RS20850	PF00072	Response regulator receiver domain
THII_RS20850	PF00563	EAL domain
THII_RS20850	PF00990	GGDEF domain
THII_RS20850	PF08447	PAS fold
THII_RS20850	PF08448	PAS fold
THII_RS20850	PF13426	PAS domain
THII_RS20855	PF00082	Subtilase family
THII_RS20860	PF00072	Response regulator receiver domain
THII_RS20860	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20865	PF10973	THII_RS20865
THII_RS20870	PF05685	Putative restriction endonuclease
THII_RS20875	PF00072	Response regulator receiver domain
THII_RS20875	PF00512	His Kinase A (phospho-acceptor) domain
THII_RS20875	PF00989	PAS fold
THII_RS20875	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
THII_RS20875	PF13188	PAS domain
THII_RS20880	PF05685	Putative restriction endonuclease
THII_RS20885	PF10411	Disulfide bond isomerase protein N-terminus
THII_RS20885	PF13098	Thioredoxin-like domain
THII_RS20890	PF00563	EAL domain
THII_RS20890	PF00990	GGDEF domain
THII_RS20895	PF00691	OmpA family
THII_RS20895	PF02412	Thrombospondin type 3 repeat
THII_RS20900	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
THII_RS20900	PF00672	HAMP domain
THII_RS20900	PF02743	Cache domain